BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (419 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P27243 O-antigen ligase n=5 Tax=Escherichia coli RepID=... 825 0.0 UniRef50_A8ARL1 Putative uncharacterized protein n=2 Tax=Citroba... 176 2e-42 UniRef50_Q6DAU1 O-antigen ligase n=1 Tax=Pectobacterium atrosept... 170 9e-41 UniRef50_D0KD48 O-antigen polymerase n=3 Tax=Pectobacterium RepI... 167 6e-40 UniRef50_D0KD50 O-antigen polymerase n=1 Tax=Pectobacterium wasa... 166 1e-39 UniRef50_Q4QTN0 WaaL n=1 Tax=Klebsiella pneumoniae RepID=Q4QTN0_... 164 6e-39 UniRef50_Q9ZIT0 Lipid A-core:surface polymer ligase WaaL n=26 Ta... 159 2e-37 UniRef50_Q9ZIS3 Lipid A-core:surface polymer ligase WaaL n=3 Tax... 144 6e-33 UniRef50_B6XJV7 Putative uncharacterized protein n=1 Tax=Provide... 140 1e-31 UniRef50_B2VF67 Lipid A core, surface polymer ligase WaaL n=5 Ta... 114 7e-24 UniRef50_C9Y384 Putative uncharacterized protein n=1 Tax=Cronoba... 96 3e-18 UniRef50_Q7NZV1 Probable O-antigen ligase; lipopolysaccharide co... 76 3e-12 UniRef50_C8Q870 Putative uncharacterized protein n=1 Tax=Pantoea... 73 2e-11 UniRef50_B2U905 O-antigen polymerase n=2 Tax=Ralstonia pickettii... 62 3e-08 UniRef50_Q1LJU1 O-antigen polymerase n=1 Tax=Cupriavidus metalli... 61 8e-08 UniRef50_A3UQU5 RfaL protein n=1 Tax=Vibrio splendidus 12B01 Rep... 60 2e-07 UniRef50_C6P739 O-antigen polymerase n=1 Tax=Sideroxydans lithot... 55 4e-06 UniRef50_A9IRJ0 Membrane protein resembling polysaccharide polym... 54 8e-06 UniRef50_Q0AIV7 O-antigen polymerase n=2 Tax=Nitrosomonas RepID=... 53 2e-05 UniRef50_Q0K7R4 Membrane spanning protein involved in lipopolysa... 53 2e-05 UniRef50_C9P0H7 O-antigen ligase n=1 Tax=Vibrio coralliilyticus ... 53 3e-05 UniRef50_C6MBK9 O-antigen polymerase n=1 Tax=Nitrosomonas sp. AL... 52 4e-05 UniRef50_B7VTJ0 Putative O-antigen ligase n=2 Tax=Vibrio RepID=B... 52 4e-05 UniRef50_B7X132 O-antigen polymerase n=1 Tax=Comamonas testoster... 50 2e-04 UniRef50_A1AXG4 O-antigen polymerase n=1 Tax=Candidatus Ruthia m... 50 2e-04 UniRef50_A5EUW2 O-antigen ligase n=1 Tax=Dichelobacter nodosus V... 49 2e-04 UniRef50_A8T0D4 Putative O-antigen ligase n=1 Tax=Vibrio sp. AND... 49 3e-04 UniRef50_B8K678 Putative O-antigen ligase n=1 Tax=Vibrio parahae... 49 4e-04 UniRef50_B5SFB1 Lipopolysaccharide o-antigen ligase protein n=4 ... 49 4e-04 UniRef50_P44067 Uncharacterized protein HI0874 n=5 Tax=Pasteurel... 48 7e-04 UniRef50_B6A4C0 O-antigen polymerase n=11 Tax=Rhizobium RepID=B6... 48 7e-04 UniRef50_Q2YBZ5 O-antigen polymerase n=2 Tax=Nitrosospira multif... 47 0.001 UniRef50_Q474P4 O-antigen polymerase n=1 Tax=Ralstonia eutropha ... 47 0.001 UniRef50_C5V1T7 O-antigen polymerase n=1 Tax=Gallionella ferrugi... 47 0.001 UniRef50_A9CZZ0 RfaL protein n=1 Tax=Hoeflea phototrophica DFL-4... 46 0.003 UniRef50_C2HRF0 O-antigen ligase n=1 Tax=Vibrio cholerae bv. alb... 46 0.003 UniRef50_A1WKR6 O-antigen polymerase n=1 Tax=Verminephrobacter e... 45 0.004 UniRef50_Q1QJM5 O-antigen polymerase n=4 Tax=Bradyrhizobiaceae R... 45 0.006 UniRef50_A0KQV1 O-antigen polymerase n=5 Tax=Aeromonas RepID=A0K... 44 0.008 UniRef50_D0Z1E7 O-antigen ligase n=1 Tax=Photobacterium damselae... 44 0.008 UniRef50_Q3B1X3 Putative uncharacterized protein n=1 Tax=Chlorob... 44 0.008 UniRef50_C4L785 O-antigen polymerase n=1 Tax=Tolumonas auensis D... 44 0.010 UniRef50_A1TYQ8 O-antigen polymerase n=1 Tax=Marinobacter aquaeo... 44 0.011 UniRef50_UPI00016A36CB O-antigen polymerase n=1 Tax=Burkholderia... 44 0.012 UniRef50_C3NSX8 O-antigen ligase n=24 Tax=Vibrio RepID=C3NSX8_VIBCJ 44 0.016 UniRef50_Q0FYD9 Putative uncharacterized protein n=1 Tax=Fulvima... 43 0.022 UniRef50_A9BR10 O-antigen polymerase n=1 Tax=Delftia acidovorans... 43 0.022 UniRef50_B6EPB7 O-antigen ligase WaaL n=1 Tax=Aliivibrio salmoni... 43 0.023 UniRef50_B9MAP4 O-antigen polymerase n=2 Tax=Comamonadaceae RepI... 42 0.045 UniRef50_A8SMC4 Putative uncharacterized protein n=1 Tax=Parvimo... 42 0.060 UniRef50_A5KZV1 Putative O-antigen ligase n=1 Tax=Vibrionales ba... 41 0.092 >UniRef50_P27243 O-antigen ligase n=5 Tax=Escherichia coli RepID=RFAL_ECOLI Length = 419 Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/419 (100%), Positives = 419/419 (100%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL Sbjct: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 Query: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV Sbjct: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 Query: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG Sbjct: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 Query: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF Sbjct: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 Query: 241 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI 300 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI Sbjct: 241 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI 300 Query: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY Sbjct: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 Query: 361 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN Sbjct: 361 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 >UniRef50_A8ARL1 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=A8ARL1_CITK8 Length = 427 Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 120/381 (31%), Positives = 202/381 (53%), Gaps = 16/381 (4%) Query: 26 YILCFFSMIIAFVDNTFSIKIYNITAIVC-LLSLILRGRQENY---NIKNLILPLSIFLI 81 Y C ++ + ++ ++K++ I C +LSL + G+ + KNL+LP+ + L Sbjct: 27 YAGCLTTLAMLLINPDEALKVF----IACAVLSLPIIGKHSKSLLSDKKNLLLPVMLLLF 82 Query: 82 GLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYS 141 GL+ +IW FK S F Y SY N K+ IF + I L S + + + + Sbjct: 83 GLVQIIWVEIFKEPGSSFTGAYRSYQNGGKVMIFAALIA-TALQSPIACAMKDRITRYWV 141 Query: 142 LS-----FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP- 195 ++ +L AGY + + N R+ G TGAAY+ + +++ AI+ + H Sbjct: 142 ITTAVGLYLFAGYQLLTSPDPLNYRVELGFEHPTGAAYALTFVALLASQAIINLRLKHTI 201 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 L+LL+ L V+ +TQTRA +L++P++ + +Y + +++ I + Sbjct: 202 LLYLLHFLVSLAVITITQTRAAILVYPVLSIGLFFLHYRHNRTVLLRTLLAFIVLAGLAA 261 Query: 256 IIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES 315 I I+ RYN + D++SY+ NS TS+GARLAM G++ K+ + +S E R Sbjct: 262 IPLKSVIEKRYNSFVTDMHSYSKKNSNTSIGARLAMQRAGIDAG-KNHYWGQSLEQRDAG 320 Query: 316 MNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGL 375 M + LRGAL F ++HLHNE I+ SLKG+ G+ + LFLY ++F AY +R+ L Sbjct: 321 MRDFARQDTSLRGALGFVDIHLHNEFIDTFSLKGISGVIALLFLYLAMFLKAYTQRSPLL 380 Query: 376 LILTLGIVGIGLSDVIIWARS 396 I++ IV GLSD++++A+ Sbjct: 381 FIISSAIVIYGLSDLLLYAKG 401 >UniRef50_Q6DAU1 O-antigen ligase n=1 Tax=Pectobacterium atrosepticum RepID=Q6DAU1_ERWCT Length = 408 Score = 170 bits (430), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 130/399 (32%), Positives = 207/399 (51%), Gaps = 13/399 (3%) Query: 28 LCFFSMIIAFVDNTFSIK----IYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 L + S+II+ + F +K I+N I+ + L + R+ +++++PLSI + + Sbjct: 16 LIYTSLIISLIAMIFDVKLASKIFNTIGIISAILLFINKRE--IKKESMLIPLSILFLCV 73 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSK-KESVLYTLYSL 142 +LIW +K S YHSY N KI GS + +T K ++ L +Y++ Sbjct: 74 TNLIWEQLYKNSGSEIIGLYHSYHNVMKILFLGSSLTLFVMTFSSKHPLTKNALNIIYTI 133 Query: 143 SFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIV-SGVAILYTKKNHPFLFLLN 201 F + Y Y+ S E R S AT +AY IGI+ S V +L T+K + F + +N Sbjct: 134 PFFLVLY--YLLSEPE-VRFSISDKIATSSAYMISFIGILTSQVILLKTEKRNLFFYFIN 190 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 ++ L+ TRA +L +P++ LI K K I+L I + ++ K Sbjct: 191 HIIFFTIIVLSGTRAAILAYPLLSAIVLIPAILKDKKINLKLIILYIMVNIVCLVACQKT 250 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 I +R ++D+N Y +NS +S+GAR+AMY GL FI +P +SAESR + Sbjct: 251 IMSRSENLISDINMYNQSNSESSVGARIAMYRSGLTSFIHAPMG-QSAESRQLDIQKQAE 309 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI-AYKKRALGLLILTL 380 ++ L GA + +HLHNE+IEA SLKG++G + L LY SLFY ++ + L LTL Sbjct: 310 QNPSLSGAALLTGIHLHNELIEAISLKGIIGGMALLLLYASLFYFSSFILKDYALTSLTL 369 Query: 381 GIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 +V GLSDVI + ++ + I L +++ RN + Sbjct: 370 SLVIYGLSDVIFYGKNATTVWIVTYCLSILLVKRNRGVQ 408 >UniRef50_D0KD48 O-antigen polymerase n=3 Tax=Pectobacterium RepID=D0KD48_PECWW Length = 427 Score = 167 bits (423), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 114/336 (33%), Positives = 181/336 (53%), Gaps = 12/336 (3%) Query: 70 KNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLK 129 + L++PL + IG+ +LIWY + +S F Y++Y +A I G+FIV L + + Sbjct: 79 RRLLIPLCLLAIGITNLIWYYHYYQPDSLFPYVYNAYRTSAHAGILGAFIVLTALHIRQQ 138 Query: 130 SKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILY 189 +K+S+ Y + ++ L YA Y + RI GTAT AAY IG +S A+L Sbjct: 139 QQKQSLFYII-AICVLALSYAFYQSLFSGMHRIGLAFGTATSAAYFLTFIGALSAQALLK 197 Query: 190 TKKNHPFL-----FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSI 244 + + FLL + A+L LT+TRA + ++PI+ L++ + + F + Sbjct: 198 LDSTYKYYLYLGHFLLVTVAIL----LTETRAAIFVYPIVGATILLSEVRHNKRLFIKAF 253 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF 304 + A L + +F + I R N+ ND++SY NS TS+GAR+AMY+ G+ + Sbjct: 254 IGSAATLLLCLFLFQETIHQRVNDLFNDVHSYNMNNSKTSVGARIAMYQSGVEAGEDALL 313 Query: 305 SFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 +SAE R + + L GA+E+ NVHLHNE+++A SLKGL G + LY SLF Sbjct: 314 G-QSAEQRTARIITQAEQKPSLAGAVEYLNVHLHNEVVDAFSLKGLPGAILLILLYASLF 372 Query: 365 YIA-YKKRALGLLILTLGIVGIGLSDVIIWARSIPI 399 Y + + R+ L ++ GLSDVI+++R + I Sbjct: 373 YFSFFVLRSHLSAALLFSLLMYGLSDVILYSRDMLI 408 >UniRef50_D0KD50 O-antigen polymerase n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KD50_PECWW Length = 410 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 128/400 (32%), Positives = 205/400 (51%), Gaps = 21/400 (5%) Query: 28 LCFFSMIIAFVDNTFSIK----IYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 L + S+II+ + F +K I+N I+ + L+L R+ +N+++PLS+F + + Sbjct: 16 LIYTSLIISLIAMIFDVKLASKIFNTIGIISTILLLLNRRR--IKKENILIPLSMFFLCV 73 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLT----SQLKSKKESVLYTL 139 +LIW +K S YHSY N KI GS + +T L K +++YT Sbjct: 74 TNLIWEQIYKNGESEIIGLYHSYHNVMKILFLGSSLTLFVMTFSSKHTLSKKALNIIYT- 132 Query: 140 YSLSFLIAGYAMYINSIHEND-RISFGVGTATGAAYSTMLIGIVSGVAILY-TKKNHPFL 197 I + + + E + R S AT +AY IGI++ IL T+KN+ Sbjct: 133 ------IPFFLLLYYLLSEPEIRFSISDRIATSSAYMISFIGILTSQYILLKTEKNNLLF 186 Query: 198 FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 + +N ++ LT TRA +L +P + LI K K I L I + ++ Sbjct: 187 YFINHITFFIIILLTGTRAAILAYPFLSAIVLIPVILKDKKINLKLIALFIMVNIICLVA 246 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 K I +R ++D+N Y +NS +S+GAR+A+Y GL FI +P +SAESR + Sbjct: 247 CQKTIISRSENLISDINMYNQSNSESSVGARIAVYRSGLTSFIHAPMG-QSAESRQLDIQ 305 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA-YKKRALGLL 376 E+ L GA + +HLHNE+IE+ SLKG++G + LFLY SL Y + + + L+ Sbjct: 306 KQAEENPSLSGATLLTGIHLHNELIESISLKGIIGGVALLFLYASLVYFSLFTLKDYALI 365 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 LTL ++ GLSDVI + ++ + + L +++ RNN Sbjct: 366 SLTLSLIIYGLSDVIFYGKNTTTVWVVTYCLSILLVKRNN 405 >UniRef50_Q4QTN0 WaaL n=1 Tax=Klebsiella pneumoniae RepID=Q4QTN0_KLEPN Length = 416 Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 111/329 (33%), Positives = 176/329 (53%), Gaps = 3/329 (0%) Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 L GL L WY A +S + + Y SY T K+ + + IVFL + E + L Sbjct: 74 LFGLTLLGWY-ALNFTHSEYWSIYDSYKETGKVLLITALIVFLVSNLRFSFPAERFSWLL 132 Query: 140 YSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP-FLF 198 YA+Y E+ R+ + AT AY + IV AIL K + FLF Sbjct: 133 IVAGLATNAYAIYQGLEIESVRLQIELDRATVIAYIFTMTNIVMLAAILELKSQYRYFLF 192 Query: 199 LLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIF 258 LL + + +A T+TRA LL FP++ + LI + K+ I +LA + I F Sbjct: 193 LLAALSGFTAIAYTETRAALLTFPVLIILLLIVHPRVRKKQLLKLGTAFIVMLALLAIAF 252 Query: 259 NKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNL 318 ++ + +RY ND + Y + NSV+S+G+RLAM++ GL + +PF SAE R +++ Sbjct: 253 HQKLTDRYQGLRNDASQYQDNNSVSSIGSRLAMFQSGLQAALDAPFG-ESAERRNDNIKR 311 Query: 319 LVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLIL 378 V + +L GAL++ +VH+HNE+IE SL+G+ G+ + + Y +L A++K + +L Sbjct: 312 QVEKKPKLTGALDYMDVHMHNELIENFSLRGVGGVITLIIFYATLLINAWRKCNVMQGML 371 Query: 379 TLGIVGIGLSDVIIWARSIPIIIISAIVL 407 TL ++ GLSDVI + + II +A++L Sbjct: 372 TLSVIIYGLSDVIFFGKEAVIIFSTALIL 400 >UniRef50_Q9ZIT0 Lipid A-core:surface polymer ligase WaaL n=26 Tax=Enterobacteriaceae RepID=Q9ZIT0_ECOLX Length = 417 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 123/396 (31%), Positives = 215/396 (54%), Gaps = 25/396 (6%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 ILC FS++ + + + K + I+ L + ++ N L++ +S+ L+G++++ Sbjct: 18 ILCIFSLMTLSLWDDVATKFLHAAGIISALYFLATPKKTITNNPTLLIFISLCLLGIVNI 77 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTL--TSQLKSK---KESVLYTLYS 141 IWYS +KV S + Y + T KI + +FI FL L +++++K + +L+ + Sbjct: 78 IWYSHYKVSGSVYTNAYRGPMETGKIALCSAFI-FLVLFAKNEMRTKIKFGKLILFASLA 136 Query: 142 LSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL---- 197 L +AM+ + DR++ AT A Y + +++ + IL + H Sbjct: 137 TQLLFFAHAMWQHFYLNVDRVALSASHATTAGYIILFPSLLASILILKSDFRHKTTLYTI 196 Query: 198 -FLLNSCAVLYVLALTQTRATLLLFPIICVAALI--AYYNKSPKKFTSSIVLLIAILASI 254 F+L+ CAV+ +T+TRA +L+FP + ++ +Y NK + + IA+LA Sbjct: 197 NFMLSLCAVI----VTETRAAILVFPFFALILIVMDSYINKR-INYKLYCFITIALLAG- 250 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 V F + R N+ NDL +Y++ N+ TS+GARLAMYE+GL + SP +S E RAE Sbjct: 251 VFSFKDTLLMRMNDLNNDLVNYSHDNTRTSVGARLAMYEVGLKTY--SPIG-QSLEKRAE 307 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFS--LFYIAYKKRA 372 ++ L + RL GAL + + HLHN++I+ S +G+ G+ T+ L FS L Y + Sbjct: 308 KIHELEEKEPRLSGALPYVDSHLHNDLIDTLSTRGIPGVVLTI-LAFSAILIYALRTAKE 366 Query: 373 LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 +LIL ++ +GLSDVI++++ +P + I+LL Sbjct: 367 PYILILLFSLLVVGLSDVILFSKPVPTAVFITIILL 402 >UniRef50_Q9ZIS3 Lipid A-core:surface polymer ligase WaaL n=3 Tax=Enterobacteriaceae RepID=Q9ZIS3_ECOLX Length = 417 Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 119/374 (31%), Positives = 185/374 (49%), Gaps = 18/374 (4%) Query: 38 VDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNS 97 +D + KI N T L LI+ ++ NYN +IL L + L+G ++LIWY +K ++ Sbjct: 29 IDLNITTKIINATGAFSLFLLIV-NKKHNYNKNVIILILGLLLLGAMNLIWYEFYKTEDV 87 Query: 98 PFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIH 157 +R Y YL + K+ +F S + FL L+ + E + + L +I Y I+ Sbjct: 88 VYRNAYRGYLESGKLLVFSS-LTFLLLSKNKFRQNEKLHFISAILVQIIMLCRAYYQGIY 146 Query: 158 -ENDRISFG--------VGTATGAAYSTMLIGIVSGVAILYTKKNHP-FLFLLNSCAVLY 207 DRI +G AT AAY + S + + K + FLF N Sbjct: 147 LHADRIPLSAMNGNIGQMGAATIAAYVITFTTLYSSIVFIKMKSKYKWFLFYANFALSFA 206 Query: 208 VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYN 267 + +T TRA + FP++ + L + + + +L + +IFNK I R N Sbjct: 207 AVMMTGTRAAIFTFPLMIMVILFLQHRDQKVFLFKGLSGVFILLLACGLIFNKEIDRRIN 266 Query: 268 EALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSP--FSFRSAESRAESMNLLVAEHN 324 D+ SY T NS +S+GAR AM G+ SP F+++S E RAE + L AE+N Sbjct: 267 SLKADVISYATKNNSQSSVGARFAMVNAGIK---GSPDGFNWQSLEQRAEKIKALSAENN 323 Query: 325 RLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVG 384 GAL F +VH+HNEI+E+ S KG +G+ + Y ++ Y +++ LL+ I+ Sbjct: 324 IYSGALLFLDVHMHNEIVESLSTKGKIGLLVLIMFYVAMIYYCIREKKYILLVFPASIML 383 Query: 385 IGLSDVIIWARSIP 398 G+SDVI A+ IP Sbjct: 384 FGISDVITHAKPIP 397 >UniRef50_B6XJV7 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XJV7_9ENTR Length = 400 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 112/391 (28%), Positives = 199/391 (50%), Gaps = 15/391 (3%) Query: 28 LCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLI 87 LCF ++++ + KI+N I+ +L+ + + N K +I+ + +FLIG+ LI Sbjct: 4 LCFIAILLLPFKPDITSKIFNFAGILSVLTFLSSPKVYLKN-KIVIVAIPLFLIGITHLI 62 Query: 88 WYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLT---LTSQLKSKKESVLYTLYSLSF 144 W +K +S +R YH Y KI +FGSFI+ +T L + L SK + T+ +S Sbjct: 63 WVELYKTSDSIYRNVYHGYFQMGKIALFGSFILLITHNALKNILISKLHLITATISQISI 122 Query: 145 LIAGYAMYINSIHENDRISFG---VGTATGAAYSTMLIGIVSGVAIL-YTKKNHPFLFLL 200 L GY +Y R+ ATGAAY+ + + + + L + + +L+ L Sbjct: 123 L--GYTVYQEFYLHIPRVELAFHNASNATGAAYAMIFLSLYAQFIFLSHGSRIKYYLYSL 180 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 + + + LT+TRA +LL+P+I + Y+ ++ ++ I I IF++ Sbjct: 181 SILITFFCVVLTETRAGILLYPVISLCIFFLYFRQNKNLKLKFVLFPIIAALIICAIFSE 240 Query: 261 PIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 I R A N++ +Y N ++ TS+G RL+M + G + + F ++SAE R + L Sbjct: 241 TIIQRMQSASNEIIAYIKNDSTSTSVGDRLSMIQTGF--YASNGFLWQSAEERNSKIIEL 298 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM-GIFSTLFLYFSLFYIAYKK-RALGLLI 377 R GA+E HLHN+++E S KG + G+ L Y ++F YK+ + +L Sbjct: 299 AKNDKRFAGAIEHMQAHLHNDLMEELSTKGWINGVLLILLFYVAIFAYGYKQAKNPFILG 358 Query: 378 LTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 T ++G+GLSD +I + + + + ++L+ Sbjct: 359 FTFVLIGLGLSDTLIISTQVSLSWVLVLILM 389 >UniRef50_B2VF67 Lipid A core, surface polymer ligase WaaL n=5 Tax=Enterobacteriaceae RepID=B2VF67_ERWT9 Length = 414 Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 100/379 (26%), Positives = 188/379 (49%), Gaps = 10/379 (2%) Query: 35 IAFVDNTFSIK----IYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYS 90 IAF F +K ++ + + + ++++L R + N I+ L GL + W Sbjct: 21 IAFATVPFGLKFGKDLFYVASYISFIAIVLNIRYYTQDKLNFIVSLLFLAFGLGTIFWLV 80 Query: 91 AFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYA 150 AFK P+ Y SY++TA++ I S I + L ++ +K +++ ++ ++ L+ YA Sbjct: 81 AFK-QPGPYIDVYRSYMSTARLVIAMSVISLVALNERIAIQKITLVVSI-AVGLLVNAYA 138 Query: 151 MYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLY-VL 209 +Y RI T AY I +V +I+ K + +F + + + Y + Sbjct: 139 LYQGLWLLQARIELNFDRTTIVAYLLTAISLVMMQSIMLLKVRYRLIFYIAAFILSYSTI 198 Query: 210 ALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAIL-ASIVIIFNKPIQNRYNE 268 LT TRA ++ +P + V +I N P + +I+LL+ +L AS ++F I++R ++ Sbjct: 199 ILTGTRAAMIAYPALIVLTVIVTKNIIPIRHKVAIILLVPVLLASTGLLFKDMIKSRIDD 258 Query: 269 ALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG 328 ++ + + S S+ +R+ M + + K+P +S E RA ++ + +L Sbjct: 259 FERNVAAINDTRSENSVFSRVWMQIVAIRTGNKAPLG-QSVEQRANEAMEVIKDDPQLYN 317 Query: 329 ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK-RALGLLILTLGIVGIGL 387 A + VH+HNE++E SLKG G+ L Y SL +++++ R L +T +V GL Sbjct: 318 ARRYLTVHMHNEVLETWSLKGAWGVTLLLSFYGSLILLSFRQSRNSMLFGVTSALVIYGL 377 Query: 388 SDVIIWARSIPIIIISAIV 406 SDVI ++ + + AI+ Sbjct: 378 SDVIFFSTEATAVFLLAII 396 >UniRef50_C9Y384 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y384_CROTZ Length = 219 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 121/219 (55%), Gaps = 14/219 (6%) Query: 208 VLALTQTRATLLLFPIICVAAL-IAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRY 266 +L T TRA ++ +P+I + L I Y + + I ++A++ I ++ + I RY Sbjct: 5 MLVATGTRAAIIAYPLIFLVLLAIKLYKEKHIPWKGIIAFVLALIVGIFMM-KEDIAKRY 63 Query: 267 NEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 N+ +D+ +Y ++TS+GARLAM++ GL K+ F ++S + R E + V + L Sbjct: 64 NDFNSDIAAYDRNITLTSVGARLAMWQTGLEA-AKNNFLWQSTDQRNEIIAATVKKEPGL 122 Query: 327 RGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF----SLFYIAYKK-RALGLLILTLG 381 RGAL F HLHNE++E SLKG G L LYF +LF A++K ++ L Sbjct: 123 RGALLFMKGHLHNEVVETLSLKGPSG----LLLYFAFIVALFCYAFRKLNSIILCAFLAS 178 Query: 382 IVGIGLSDVIIWARSIPIIIISAIVLLLVI--NNRNNTI 418 I+ G+S V+ ++++ PI + +++ +V NR+ + Sbjct: 179 IIMFGISGVMFYSKTTPIAWMLTLIMSIVFLEQNRHQDV 217 >UniRef50_Q7NZV1 Probable O-antigen ligase; lipopolysaccharide core biosynthesis n=1 Tax=Chromobacterium violaceum RepID=Q7NZV1_CHRVO Length = 429 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 82/323 (25%), Positives = 150/323 (46%), Gaps = 31/323 (9%) Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSK--KESVLYTLYSLSF 144 +WY D F + +Y + KI++ ++ L S + + L S S Sbjct: 90 LWYFPAPTDAGLFPVAF-AYQLSNKIWLSALPLLLFPLWSPFRERLSPAGATLALVSASA 148 Query: 145 LIAGYAMYINSIHENDRISFGVGT--ATGAAYSTMLIGIVSGVAILYTKKNHPF------ 196 L++ + + + ++ + G+G+ ATGAAY ++S + HPF Sbjct: 149 LLS--MITLKAWYDAHGVRVGLGSLYATGAAY------LLSAIHFFALLLFHPFRLKKWQ 200 Query: 197 ---LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 L LL + + ++A T TRA LL++ + AL+ + T +I L+++ + Sbjct: 201 WLGLCLLIALQFMSIVA-TGTRAALLVYLFVLGCALLWRFGLHQSWRTYAIAALLSV--A 257 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 + + + +R +A DL +Y+ N+ TSLG R ++++ G++ + P+ +S ++R Sbjct: 258 TLWLSWAAVGSRVKQAQADLIAYSQGNADTSLGIRFSLWDAGVHAVREQPWG-QSIQARD 316 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK--- 370 + LV + + AL +VHLHNE +E SL+GL G S L +K+ Sbjct: 317 VLFHQLVKDGALNKAALIMRDVHLHNEWLEILSLQGLPGALSWLIFLLGFGVYGWKRGGF 376 Query: 371 -RALGLLILTLGIVGIGLSDVII 392 R L + +V GLSDV++ Sbjct: 377 FRRFALFYIGFWLV-FGLSDVLL 398 >UniRef50_C8Q870 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q870_9ENTR Length = 422 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 141/267 (52%), Gaps = 33/267 (12%) Query: 155 SIHE----NDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFL---LNSCAVLY 207 +HE DRI TA A+ S+ ++ + + + K+ L++ L A+++ Sbjct: 158 GVHEYLLTGDRIKL---TADAASSSSYMVLFLYCAYLWLSAKDVSRLWITIDLAFVAIIF 214 Query: 208 VLA-LTQTRATLLLFPIICVAALIAYYN-----KSPKKFTSSIVLLIAILASIVIIFNKP 261 L LT TR +LL F I + + +Y KS + +++L+ ++ S Sbjct: 215 SLVILTGTRVSLLAFLFITLCQISRFYGLLTVLKSRRNRVITLILVAGLVMST------- 267 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 R+ +A N++ +Y+N +S TS+GAR+A+++ GL+ F+ F S + R + +A Sbjct: 268 -GERWMQAFNNIENYSN-DSSTSVGARVAIWDSGLH-FLPEHLGFSSPDVRTVTARAYIA 324 Query: 322 EHNRLRGALE-FSNV--HLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL-GLLI 377 + G E ++NV ++HNE +E +L+G++G+ +FLY + F+I K+ AL G+ + Sbjct: 325 AFHP--GNTEGYTNVKYNMHNEFLEVVTLEGIVGLVCLVFLYVATFWIWSKRSALQGISL 382 Query: 378 LTLGIVGIGLSD-VIIWARSIPIIIIS 403 + +GL+D V+I+ ++ + +I+ Sbjct: 383 PVAALFIMGLTDSVLIYPQTTTLFVIA 409 >UniRef50_B2U905 O-antigen polymerase n=2 Tax=Ralstonia pickettii RepID=B2U905_RALPJ Length = 426 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 3/164 (1%) Query: 197 LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 L LL CA LY L+Q R + P++ + A+ + S KK ++++L L + V Sbjct: 191 LRLLAGCAGLYASYLSQARGGWIAIPVLLLIAVATLRHVSWKKRLTALLLFFVFLIA-VC 249 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 + + ++ R+++A+ D+++Y + TS+G R +++ + + P + ++ Sbjct: 250 VSSSVVRTRFDQAMEDIHAYQAGQTNTSVGIRFQLWKAATLMLTRHPLAGVGRGQFGPAL 309 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 + AE + A F H HNE + G+ G++GI + L LY Sbjct: 310 KAIHAEGLITQEATAFE--HAHNEFLYNGATLGVLGIGALLALY 351 >UniRef50_Q1LJU1 O-antigen polymerase n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LJU1_RALME Length = 413 Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 26/195 (13%) Query: 208 VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILA-SIVIIFNKPIQNRY 266 +L L TR ++ + V L+ Y + + V +A LA ++ + P+ R Sbjct: 184 ILMLNGTRGAVVAMLVTSVPMLMIRYRRFSVRMLIVAVCAVATLAIGAYMVPDSPVSKRV 243 Query: 267 NEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 ++A++++ Y N TS+G RL ++ IGL F + P++ + V + R+ Sbjct: 244 DDAVSEIQMYRQGNIETSVGVRLKIWHIGLQYFSEHPWT-----------GVGVGQFARI 292 Query: 327 RGALEFSN---------VHLHNEIIEAGSLKGLMGIFSTLFLYF---SLFYIAYK-KRAL 373 A EF + H HN+I+EA S G+ G+ L L+ LF A + R+L Sbjct: 293 LHASEFCHETKSLACVLEHAHNDIVEAASTTGIPGLMVMLGLFLVPAVLFARALRAARSL 352 Query: 374 G-LLILTLGIVGIGL 387 G ++LG G+G+ Sbjct: 353 GNPQGVSLGGAGLGV 367 >UniRef50_A3UQU5 RfaL protein n=1 Tax=Vibrio splendidus 12B01 RepID=A3UQU5_VIBSP Length = 411 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%) Query: 169 ATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQT-----RATLLLFPI 223 A G A S L+ IV A++Y K+ L L+ +V +L L+ T R +L P Sbjct: 148 AGGIASSLALLSIV---ALIYAKQTKELL-LITISSVSIILGLSATLLAGSRGAWILPPF 203 Query: 224 ICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVT 283 I + + Y K F S ++ +++I A+I+ I + I+ R + L+D++ Y N+ S T Sbjct: 204 III--YLFYIYKDSFSFRSKVIAILSITATIIFI-SPTIKPRIDAMLSDIHRYQNSYSKT 260 Query: 284 SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIE 343 S GARL M++ + P + + + + + + L+ + HN+ E Sbjct: 261 SSGARLEMWKSATYSALDKPIFGQGFDGVKRAKKAQIEKGLVDKQVLK--SKRAHNQFFE 318 Query: 344 AGSLKGLMGIFSTLFLYFSL-FYIAYKK 370 KGL+G+F T+F +F + Y+ +KK Sbjct: 319 ELQTKGLIGLF-TMFAFFGVPLYLLWKK 345 >UniRef50_C6P739 O-antigen polymerase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P739_9PROT Length = 425 Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 64/281 (22%), Positives = 125/281 (44%), Gaps = 23/281 (8%) Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR 161 T H Y ++ ++ + VFL L +L+ VL + L+ +I G+ M N + Sbjct: 90 TAHPYDAASRYWL--AIPVFLLL-QRLRPAVFVVLQVAFPLAAII-GFMMS-NDLGAGSE 144 Query: 162 ISFGVGTATGAAYSTM--LIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLAL-----TQT 214 G+GT + + + G++S +I + +++ L LL ++L L + + Sbjct: 145 NRSGIGTLDLIHFGDLELIFGVLSLFSINWLGRDNKLLRLLKVTG--FMLGLLASFESGS 202 Query: 215 RATLLLFPIICVAALIAYYNKSPK---KFTSSIVLLIAILASIVIIFNKPIQNRYNEALN 271 R P+ LI +Y ++ + K ++ ++ + + + V + + Q+R NE +N Sbjct: 203 RGGWFAIPVFI---LIYFYFRTSRVSLKMAAASLIATSFVIAFVYLASGTFQHRVNELIN 259 Query: 272 DLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALE 331 D+ ++ N TS G R +Y+ +IF P E A M ++ A E Sbjct: 260 DIATFEQGNRDTSTGVRWQLYKAAADIFAHHPIFGVGPEGFALEMQPMLDAGKITPLAAE 319 Query: 332 FSNVHLHNEIIEAGSLKGLMG---IFSTLFLYFSLFYIAYK 369 +HN+I+ + G+ G + ++ F+ F LF+ A K Sbjct: 320 LGRGEVHNDILSKAAGMGIFGLAALLASYFVPFGLFWRATK 360 >UniRef50_A9IRJ0 Membrane protein resembling polysaccharide polymerases n=4 Tax=Bordetella RepID=A9IRJ0_BORPD Length = 419 Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 28/231 (12%) Query: 206 LYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNR 265 L+ L+QTR+ L + V L+A + S + T+ + L A + + + ++R Sbjct: 193 LWAAWLSQTRSCWALLVVFGVVLLLANRHWSLRAKTAFVAGLSAFVVAGAVFAWHAKESR 252 Query: 266 YNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES-RAESMNLLVAEHN 324 + E +DL Y + + TS+G RL +++ +F + P + A + RAE L H+ Sbjct: 253 FAEVRHDLTRYEHQDRDTSVGIRLQLWQASWLMFKEKPLTGVGAPNFRAELARL----HD 308 Query: 325 RLRG------ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF---SLFY--------IA 367 +G A +F HN+ + A ++ GL G+ S L LYF ++F+ + Sbjct: 309 --QGVVTKLVATKFGEP--HNDFLGALAMYGLPGLLSILALYFIPAAIFFRRLGSSDPVT 364 Query: 368 YKKRALGLLILTLGIVGIGLSDVIIWA-RSIPIIIISAIVLLLVINNRNNT 417 + LGLL TLG L++++ + RS+PI ++ +VL + + R + Sbjct: 365 HMGAKLGLL-FTLGYATFSLTEMMFRSMRSVPIYAVTVVVLFALSSERARS 414 >UniRef50_Q0AIV7 O-antigen polymerase n=2 Tax=Nitrosomonas RepID=Q0AIV7_NITEC Length = 405 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%) Query: 234 NKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYE 293 K + +SI+ + + A+ +F+K R +DL + + TS+G RLA+++ Sbjct: 199 GKVLASYLASIIAVTVLFAASSDVFHK----RLEAIGSDLQLFQQGHYQTSVGYRLAIWD 254 Query: 294 IGLNIFIKSP-FSFRSAESRAESMNLLVAEHNRLRGAL-EFSNV-HLHNEIIEAGSLKGL 350 IGL+ + +P S ++ N ++ + L EF H HNE+IE G GL Sbjct: 255 IGLHGLVDAPVIGHGSGMAKHYLQNSFMSYKEGIYQDLPEFHEAKHFHNELIEIGVHLGL 314 Query: 351 MGIFSTLFLYFSLFYIAYKKRALGLL 376 +GI + +FL + F +K+ + LL Sbjct: 315 LGILAFIFLLWCWFK-TFKQHQMALL 339 >UniRef50_Q0K7R4 Membrane spanning protein involved in lipopolysaccharide biosynthesis n=2 Tax=Cupriavidus RepID=Q0K7R4_RALEH Length = 429 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/231 (23%), Positives = 109/231 (47%), Gaps = 19/231 (8%) Query: 176 TMLIGIVSGVAILYTKKN---HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAY 232 +ML+GI++ ++I + + L LL A LY ++ TR L P++ AL A Sbjct: 169 SMLMGILALISIGWDRPRDYLQSGLKLLAGFAGLYASYMSGTRGGWLAIPVLAFIALAAS 228 Query: 233 YNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYT-NANSVTSLGARLAM 291 + + +++V L ++ + + + +Q R + +++++ + + T G RL + Sbjct: 229 HRLTRMHKAAAMVGLAGLM-GLAWLGSARVQQRTADVVSEVSQFAQHVTPDTPTGIRLQL 287 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 + L + P++ E+ ++ L A+H + L + H HNE++ A + G+ Sbjct: 288 WRASLELIQAHPWTGVGPENFERTLQTLEAQH--VITPLAATMPHSHNELLHATATLGIP 345 Query: 352 GIFSTLFLY-----FSLFYIAYKKR------ALGLLILTLGIVGIGLSDVI 391 G+ + L LY F L ++ R A+G L L G + GL++V+ Sbjct: 346 GLLAILALYLVPAAFFLRHLGNADRGTQVASAMG-LALCCGFMVFGLTEVM 395 >UniRef50_C9P0H7 O-antigen ligase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9P0H7_9VIBR Length = 389 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 13/188 (6%) Query: 206 LYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNR 265 L+ L LT +R + +PI + + +N + L+ L++I + F I R Sbjct: 184 LWALILTDSRGVWVAYPIAMMLVIYRSFNNLSLVKLGTFTLIG--LSAIYLSFKPMIDER 241 Query: 266 YNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNR 325 + + + NS + N TS GARL ++ G++++ + P E +L + Sbjct: 242 VDRTVAEFNSISKGNYETSFGARLDLWTFGVDVWKEQPMV-------GEGDIMLEEGIRK 294 Query: 326 LRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF---SLFYIAYKKRALGLLILTLGI 382 + + +HLHN+ I+ + G +G F + +F L + R + +++ L Sbjct: 295 VPNRKAYRQLHLHNQYIDTLARYGSVGFFIMMVWFFYPVRLNKARERDRVITQVLVMLVF 354 Query: 383 VGIGLSDV 390 + GLSDV Sbjct: 355 IA-GLSDV 361 >UniRef50_C6MBK9 O-antigen polymerase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBK9_9PROT Length = 396 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 14/207 (6%) Query: 173 AYSTML-IG--IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAAL 229 ++S ML IG + SG+A + LF++ + +L++ Q LL +I + L Sbjct: 145 SFSAMLGIGAIVTSGMACMNPSVRLQILFVIATLVLLFI-QFHQNGRIFLLVTLISIL-L 202 Query: 230 IAY--YNKSPKKFTSSIVLLIAILASIVIIFNKPI-QNRYNEALNDLNSYTNANSVTSLG 286 IA+ Y +KF ++L+ ++ ++V ++ P+ Q R + +D+ N +SLG Sbjct: 203 IAFLRYQIEMRKFL--MILISVLVVAVVFAYSSPVFQARLIQIKSDIELLQQGNYSSSLG 260 Query: 287 ARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNR--LRGALEFSN-VHLHNEIIE 343 RLAM+++GL+ + P S + +A + + EF H HN+ IE Sbjct: 261 YRLAMWDVGLHGIAERPLSGFGTGMPEKYFEKTIATYKDGLYKDLPEFQETAHYHNDWIE 320 Query: 344 AGSLKGLMGIFSTLFLYFSLFYIAYKK 370 G G+ G+ FL +S +Y A+ + Sbjct: 321 IGMHIGVPGMLVLGFLLWS-WYQAFNR 346 >UniRef50_B7VTJ0 Putative O-antigen ligase n=2 Tax=Vibrio RepID=B7VTJ0_VIBSL Length = 392 Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 5/110 (4%) Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 + R + +L++ + + N TS+G RL MY+ G + F+ SP + A+ L Sbjct: 239 VSERIDYSLHEYHQISQGNMDTSVGLRLQMYQAGFDFFVNSPLLGIGGDKEAQLDKLSFT 298 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR 371 N G N HLHN I+ + GL+GI L SL Y + R Sbjct: 299 PTN--SGKRFIVNAHLHNNYIDKAASSGLVGI---ALLILSLMYPLFNSR 343 >UniRef50_B7X132 O-antigen polymerase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X132_COMTE Length = 434 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/169 (21%), Positives = 79/169 (46%), Gaps = 7/169 (4%) Query: 189 YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVA-ALIAYYNKSPKKFTSSIVLL 247 ++K L LL +C V L+ +R + ++ P++ A L+A+ N + + + + Sbjct: 180 WSKSRAAALGLLGACGVFASF-LSDSRGSWVVIPLLIAAIWLMAWLNGYKRLASLAAAAM 238 Query: 248 IAILASIVIIFNKPIQNRYNEALNDLNSY---TNANSVTSLGARLAMYEIGLNIFIKSPF 304 + + + + + ++ R EA +++ Y +VTS+G RL + + +++ + PF Sbjct: 239 LMLGLIVAVPAYQKLEQRSTEAAREVSQYLQDPQKYAVTSVGQRLEQWRLAIHLIEQRPF 298 Query: 305 SFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGI 353 S + +V + +E+ H HNEI++ +GL G+ Sbjct: 299 SGWGLAGYPAAKKQMVDQGLAHPSVMEYG--HAHNEILDMWVKRGLPGL 345 >UniRef50_A1AXG4 O-antigen polymerase n=1 Tax=Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) RepID=A1AXG4_RUTMC Length = 411 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%) Query: 149 YAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAIL-YTKKNHPFLFLLNSCAVLY 207 YA+Y NS DR+ G + T + + V+ + + T K F FL+ A Y Sbjct: 133 YAVYQNSYLGIDRVEAGADSPTIFGFIMVFFAFVAIIDVWSQTNKEKLFSFLIFLLAS-Y 191 Query: 208 VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIF---NKPIQN 264 + L+ TR + ++F ++ + + ++ + T +LLI + A I +F +K + + Sbjct: 192 SIILSGTRISWMIFLVLFFSVIFIWFIQGC--LTKKGLLLIVVTAVITTVFFIHSKQVND 249 Query: 265 RYNEALNDLNSYT-NANSVTSLGARLAMYEIGLNIFIKSP 303 R N A ++ +++ N NS S+ RL+M+ GL F + P Sbjct: 250 RINVAFEEIKTFSKNKNSYGSIDLRLSMWRGGLAAFKQQP 289 >UniRef50_A5EUW2 O-antigen ligase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EUW2_DICNV Length = 401 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 14/192 (7%) Query: 176 TMLIGIVSGVAILYTKKNHPFLFLLNS--CAVLYVLALTQTRATLLLFPIICVAALIAYY 233 +M+ + SG + Y K L+ + C V AL R + L+ P I V I Sbjct: 144 SMIFAVFSGFRLPYAKTRWQRFILIVALFCGVC-AAALGGGRGSWLIVPPILVLFFIMMR 202 Query: 234 NK-SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMY 292 + + K LL++ +++ I + R +DL+ Y TS G RL M+ Sbjct: 203 KRVTLKNAALGFFLLLSFFSALYCIPQTGVAARVRGVFSDLDHYRQGTVATSQGMRLEMW 262 Query: 293 EIGLNIFIKSPF-SFRSAESRAESMNLLVAEHNRLRGALEFSNV---HLHNEIIEAGSLK 348 ++ + P + S +AE L+ R FS HLHN+ I+ G Sbjct: 263 RCARLMWQEKPLMGWGSVGMQAEKARLIA------RNDCHFSIAPFNHLHNDYIDIGVRY 316 Query: 349 GLMGIFSTLFLY 360 G++G F+ LF+Y Sbjct: 317 GIVGCFNFLFIY 328 >UniRef50_A8T0D4 Putative O-antigen ligase n=1 Tax=Vibrio sp. AND4 RepID=A8T0D4_9VIBR Length = 425 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 17/188 (9%) Query: 174 YSTMLIGIVSGVAILY-----TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA 228 YST+ + I GV LY K + LL+ L V+ +Q R T L + VAA Sbjct: 157 YSTVSVAI--GVGSLYFLFSNASKQIQRMMLLSFALSLNVIIFSQARGTAL--ALCSVAA 212 Query: 229 LI---AYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSL 285 L+ A Y+K + + + LI I++ ++ IQNR + N++ +++ +S+ Sbjct: 213 LVILFAVYSKLEIRKQLTYIFLIVIVS--LLANTHLIQNRIDFTANEMQRIESSDMNSSI 270 Query: 286 GARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAG 345 G R M++ + + + P + ++ LL + + A+ F+ H HNE I Sbjct: 271 GLRFQMWKAAVYLIKEKPL-LGYGDDHKQAKQLLADQGIITQDAVPFT--HYHNEFISDW 327 Query: 346 SLKGLMGI 353 +L GL G+ Sbjct: 328 ALDGLTGV 335 >UniRef50_B8K678 Putative O-antigen ligase n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K678_VIBPA Length = 392 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 39/281 (13%) Query: 111 KIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIA-GYAMYINSIHENDRISFGVGTA 169 ++ I S +VFL + +K K L L L+ LI+ Y ++ + + DRI + V Sbjct: 85 RVLIATSLLVFLPQDNVVKFVKTH-LANLTPLASLISIAYVIHQSYYLQLDRIEWSVNPI 143 Query: 170 TGAAYSTMLIGIVSGVAIL---YTKKNHPFLFLLNSCAVLYV----LALTQTRATLLLFP 222 Y+TM VS +AI+ Y + F + + L++ + +++TR TL+ F Sbjct: 144 ---PYTTM----VSAIAIISFYYMVSPYNFRIKIANTVGLFLSVTGILISETRGTLVAF- 195 Query: 223 IICVAALI----------AYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALND 272 +AAL+ +K K FT + IAIL ++ + I+ RY + + Sbjct: 196 ---IAALLILSLFRLDFSTLKHKGIKYFT---IASIAIL-TLFFVNKDTIKPRYERTVFE 248 Query: 273 LNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEF 332 + N N TS+G RL M++ GL + K P +S + L E+ + A+++ Sbjct: 249 VQQILNGNYSTSIGLRLHMWQAGLEL-AKHPTLIGLGDSHIDEKKKLAEENLIHQSAVKW 307 Query: 333 SNVHLHNEIIEAGSLKGLMG-IFSTLFLYFSLFY-IAYKKR 371 H HN+ I + +G++G +F + L F +Y I Y+ Sbjct: 308 R--HYHNDYITSWVKRGVVGFVFLLVMLSFPFYYFIRYRSE 346 >UniRef50_B5SFB1 Lipopolysaccharide o-antigen ligase protein n=4 Tax=Ralstonia solanacearum RepID=B5SFB1_RALSO Length = 435 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 19/205 (9%) Query: 152 YINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLA- 210 ++N IH D +++G++S ++I + +K+ + LL +L L Sbjct: 159 FLNPIHFGD--------------IALVLGVLSALSINWWRKDPLAVRLLKIGGLLAGLVA 204 Query: 211 --LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI-IFNKPIQNRYN 267 LT +R + P I + +I P ++ +V +A+L + + I + I+ R + Sbjct: 205 SLLTGSRGGWVALPFILMLVVIMRGRDKPARW-RVLVPAVAVLGVVALYIVSGTIRERIH 263 Query: 268 EALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLR 327 DL Y TS+G RL +Y+ L + + P A+S+ LV Sbjct: 264 MVWADLAQYGQGQKDTSVGIRLQIYQAALMLIPQHPIFGLGPGGFADSLQALVDAGRMTA 323 Query: 328 GALEFSNVHLHNEIIEAGSLKGLMG 352 A + HN+++ + GL+G Sbjct: 324 TAAQLGRGEAHNQLLAYTANFGLVG 348 >UniRef50_P44067 Uncharacterized protein HI0874 n=5 Tax=Pasteurellaceae RepID=Y874_HAEIN Length = 399 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%) Query: 262 IQNRYNEALNDLNSYTNANSV-TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 I+ RYN A +D+ SY N+ TSLGAR M+E L ++P ++ E + V Sbjct: 242 IEKRYNAAKSDIVSYLEKNNRNTSLGARFDMWENALIAIKEAPIFGHGSDGYDEFRHKQV 301 Query: 321 AEHNRLRGALEFSNVHLHNEIIEAGSLKGLMG 352 + L F + LHN+ +E+ +GL+G Sbjct: 302 KSKQMAKTTLNFGS--LHNQYLESWVKRGLVG 331 >UniRef50_B6A4C0 O-antigen polymerase n=11 Tax=Rhizobium RepID=B6A4C0_RHILW Length = 424 Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 13/254 (5%) Query: 128 LKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVS---- 183 L ++S L L L AG M + + +I F + A + L+G++ Sbjct: 116 LPRMRQSPDGRLVPLFILGAGIGMIVTFLFSLLQIMFLMERAEAGTSNAALLGVIGILFG 175 Query: 184 GVAIL---YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 G+A+L K + +L A L + L+ TR+ L+ P+ V L + S Sbjct: 176 GIALLNVQSPKSVEQRIAILGYAAGLGCVLLSGTRSAWLVIPVHIVIFLWYFRKHSFHLS 235 Query: 241 TSSIVLLIAIL-ASIVIIFNKPIQNRYNEALNDLNSYTNANS-VTSLGARLAMYEIGLNI 298 S+ + ++L A ++ + + I +R ++ S ++ VTSL AR A+Y+ ++ Sbjct: 236 LRSLAITGSLLFAGLIALGSGQILHRIEALQENMASLERSDGEVTSLSARFALYKGAISA 295 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 K P + ++R S +L + LR L +S H+HN + AG G+ GI + Sbjct: 296 ISKDPLTGYGPQNRMAS--VLAELPDSLRPQLTYS--HVHNGFLTAGIDAGIFGIAALSL 351 Query: 359 LYFSLFYIAYKKRA 372 + + A++K A Sbjct: 352 MLATPVIGAWRKEA 365 >UniRef50_Q2YBZ5 O-antigen polymerase n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YBZ5_NITMU Length = 431 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 10/181 (5%) Query: 235 KSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEI 294 K+ +K I+ + I+ ++++ + Q R + + TSLG RLAM+++ Sbjct: 220 KTERKALLGIIASLTIVVAVLVYGSNSFQARLEQVEVEAKLSQQGKYDTSLGYRLAMWDV 279 Query: 295 GLNIFIKSPFSFRSAESRAES-MNLLVAEHNR--LRGALEFSNV-HLHNEIIEAGSLKGL 350 GL+ ++ PF F ES VA + R ++ H HN+ IE G G Sbjct: 280 GLHGILEHPF-FGHGTGMPESYFEKTVATYKGGIYRDLPQYVGASHYHNDWIEIGMHTGA 338 Query: 351 MGIFSTLFLYFSLFYI--AYKKRALGLLILTLGIVGIGLSDVIIWARSIP--IIIISAIV 406 +GI + F +S F A++ LG ++ I GL+D IP +++I+AI Sbjct: 339 LGILAYGFFLWSWFQTLRAHRLPVLGAALVFF-IFLSGLTDTFALYSKIPTFLVVITAIA 397 Query: 407 L 407 + Sbjct: 398 I 398 >UniRef50_Q474P4 O-antigen polymerase n=1 Tax=Ralstonia eutropha JMP134 RepID=Q474P4_RALEJ Length = 430 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 10/163 (6%) Query: 202 SC-AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF--TSSIVLLIAILASIVIIF 258 +C A LY LT TR + L P+ + L + +K+ +S V+++ ++ ++ Sbjct: 197 ACVAGLYTSVLTATRGSWLAIPLFLIFFLFFARLEVRRKWLWVASFVVVVGLMLTL---- 252 Query: 259 NKPIQNRYNEALNDLNSYTNANS-VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 N+ NR+ + +DL +Y++ TS G RL ++ L + + P E+ S+ Sbjct: 253 NQNAANRFLDTQSDLAAYSHGGGKSTSTGHRLQLWGAALTLIAREPVFGIGRENYDSSIK 312 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 + A + G L H HNEI+ + + G+ G+ S L LY Sbjct: 313 EM-ARKKEITGELT-RFAHSHNEILFSTVVSGVFGLLSALALY 353 >UniRef50_C5V1T7 O-antigen polymerase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1T7_9PROT Length = 414 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 4/133 (3%) Query: 176 TMLIGIVSGVAILYTKKNHPFLFLLNSC---AVLYVLALTQTRATLLLFPIICVAALIAY 232 +++GI+S +I + + + + +L A +Y L+ TR + P+I + L+ + Sbjct: 154 ALMLGILSACSINWFRLDSRLVVMLKVIGLIAGMYASILSGTRGGWVAIPVILLVCLVVW 213 Query: 233 YNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMY 292 KK ++ + A+LA F PIQ R +++ ++ S + N TS G RL ++ Sbjct: 214 KVYDVKKLAGGLLAVAAMLAVSYFAFT-PIQQRVSDSYVEIRSIASGNLETSTGFRLQIW 272 Query: 293 EIGLNIFIKSPFS 305 + IF+ +P + Sbjct: 273 KGASQIFLANPIA 285 >UniRef50_A9CZZ0 RfaL protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CZZ0_9RHIZ Length = 404 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/221 (22%), Positives = 104/221 (47%), Gaps = 18/221 (8%) Query: 212 TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV--IIFNKPIQNRYNEA 269 TQ++ L P++ + ++ + ++ ++ S + A ++ + + P+ + A Sbjct: 186 TQSKGGWPLIPLVLIWVIVEDFWRASRQGRRSFFVAAFTFACLLPFMPLDTPLSRVKSAA 245 Query: 270 LNDLNSYTNANSVT-SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG 328 + + + V S ARL ++ GL+I+ + P+ S E + M+ +A+ N + Sbjct: 246 IGTMAWFQTGEVVEGSADARLELWRFGLSIWPEKPWLGHSREGVVQRMHEKIAQ-NEVDP 304 Query: 329 ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFS---LFYIAYK-----KRALGL--LIL 378 ++ S LHNE I+ + +GL+G+ S + ++ + +F AY ++ LG LI Sbjct: 305 WIK-SLTGLHNEPIQLLAEQGLVGLLSWVMMFAASILVFGRAYTEHSRVQKVLGQAGLIT 363 Query: 379 TLGIVGIGLSDVIIWA---RSIPIIIISAIVLLLVINNRNN 416 + GLSD+ + R I + ++ A+ L+V R Sbjct: 364 VAASLTFGLSDMNLMLNVNRQIFVFLVMALAALVVAERRRT 404 >UniRef50_C2HRF0 O-antigen ligase n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2HRF0_VIBCH Length = 416 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 12/195 (6%) Query: 198 FLLNSCAVLYVLALTQTRATLLLFPIICVAALI-AYYNKSPKKFTSSIVLLIAILASIVI 256 FLL C +L T+TRA+ + I+ ++ ++ + +N + KK + + L+A++ I Sbjct: 193 FLLFICIIL-----TETRASWMALVIVFLSCIVYSIFNSNLKKKSIYLSSLLAVI--IGF 245 Query: 257 IFNKPI-QNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES 315 +N PI NR +A + Y N N +S G R+ +++ GL++ K+P Sbjct: 246 GWNIPIVHNRIYDAYYQIEQYKNDNYNSSTGIRIKLWQAGLDMAKKAPLLGLHRVDVQHI 305 Query: 316 MNLLVAEHNR---LRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA 372 N + E LR L N + HN+ +++ G +G+ + F + K R Sbjct: 306 SNAKIQEGKYPEFLRSFLIHPNPNFHNQYVQSFVNSGFIGLLFLIVFIFLPILVFIKNRK 365 Query: 373 LGLLILTLGIVGIGL 387 + +++ I+ L Sbjct: 366 INTTLISCAIIQFSL 380 >UniRef50_A1WKR6 O-antigen polymerase n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WKR6_VEREI Length = 415 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 19/166 (11%) Query: 210 ALTQTRATLL-LFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPI-QNRYN 267 AL+Q+R L L ++ V+A + P++ L A+L +V++ P+ R++ Sbjct: 187 ALSQSRGGWLALVLVLPVSAWLLARTIGPRRVCWG---LCALLLGVVVLAQMPVVGQRFD 243 Query: 268 EALNDLNSYTN-ANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 +A ++ +Y + +S+G RLA + + + + P + R M V R+ Sbjct: 244 QARQEVQTYREMGDDSSSVGQRLAHWRLAWEMGRERPLT---GWGRTGYMQEKV---RRV 297 Query: 327 RGALEFSNV----HLHNEIIEAGSLKGLMGIFSTLFLY---FSLFY 365 L +V H+HNE+++ +G+ G+ L Y +LF+ Sbjct: 298 AAGLVRPSVLTFGHVHNEVLDLFVKRGIFGVLLLLLFYGTALALFW 343 >UniRef50_Q1QJM5 O-antigen polymerase n=4 Tax=Bradyrhizobiaceae RepID=Q1QJM5_NITHX Length = 434 Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust. Identities = 68/326 (20%), Positives = 132/326 (40%), Gaps = 43/326 (13%) Query: 73 ILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKK 132 ILP++ F++ L +W SA P+ A H+ AK+ + I +S + Sbjct: 87 ILPVAFFVLALAGTLWSSA------PWTARLHAVGPLAKLLVIPLLIYHFR-----RSSR 135 Query: 133 ESVLYTLYSLSFLIAGYAMYINS--IHENDRISFGVGTATGAAYSTMLIGIVSGVAILYT 190 ++T +FL++ + I S + + R++ G G I A+ Sbjct: 136 GQWVFT----AFLVSCALLMIMSWIVAFDPRLALKSGAYYGVPIKNY-IDQSQEFALCAV 190 Query: 191 KKNHPFLFLL-----NSCAVLYVLALT---------QTRATLLLFPIICVAALIAYYNKS 236 +P + LL A+L ++A++ +R L+ P++ + + + + Sbjct: 191 ALAYPVVHLLLQKRIKEAALLLIVAVSFVANMMFVVVSRTALVTMPVML--GIFMFLHLT 248 Query: 237 PKKFTSSIVLLIAILASIVIIFNKP-IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIG 295 P++ + V +LA +V+ F P +Q+R + + Y ++ TS+G RL + Sbjct: 249 PRRMIA--VSCTTLLAGVVMWFASPSLQSRVASFSSQYDQYETSDQATSIGLRLEFWRKS 306 Query: 296 LNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGI-- 353 L F+ +P + L A GA + HN+ + A G +GI Sbjct: 307 LRFFVDAPL---AGHGTGSVQGLFTAAAVGQTGAAAEVVNNPHNQTLNAAVQWGSLGILV 363 Query: 354 -FSTLFLYFSLFYIAYKKRALGLLIL 378 ++ + SLF +GLL++ Sbjct: 364 LYAMWLFHLSLFRGTSLADWVGLLVV 389 >UniRef50_A0KQV1 O-antigen polymerase n=5 Tax=Aeromonas RepID=A0KQV1_AERHH Length = 404 Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 36/184 (19%) Query: 199 LLNSCAVLYVLALTQTRATLLLFPIICVAALIAY--YNKSPKKFTSSIVLLIAILASIVI 256 L+ A L+ L L+Q+R L F +I +A +I Y Y K P K+ + +L +A SI + Sbjct: 181 LVGLMAALFALYLSQSRGVWLAFGVI-LAYVICYKAYFK-PWKYVAVAMLCVA---SIGV 235 Query: 257 IF--NKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF-------- 306 I+ N+ +Q+R + A++DL + +S G R+ ++ F+ +P + Sbjct: 236 IYHTNQLVQSRVHSAVSDLKLVEEGSYDSSWGLRVVAWQSAWLGFLDAPLAGVGTNGFDA 295 Query: 307 ---RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMG-----IFSTLF 358 R AES S ++L +E H HN+ ++ ++G +G IF L Sbjct: 296 LKRRQAESGVLSPSILSSEL-----------AHAHNQYMQNLVIRGSIGFIALVIFLGLP 344 Query: 359 LYFS 362 LY + Sbjct: 345 LYLA 348 >UniRef50_D0Z1E7 O-antigen ligase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z1E7_LISDA Length = 395 Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/127 (18%), Positives = 61/127 (48%), Gaps = 4/127 (3%) Query: 226 VAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSL 285 + ++I +Y K+ I+ L+ ++ S+ I+ ++ R+ + + + N N TS+ Sbjct: 201 IYSMIRFYQP---KYWLYIMGLVILIGSMGIVLKPQLEARWQQTEQEYQAIQNGNMCTSI 257 Query: 286 GARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAG 345 G RL M++ +I ++ + ++ + ++ L + + ++ H HN+ ++ Sbjct: 258 GLRLQMWQAA-SILVEDDPILGTGDAHIQKLDELYHQGRIEKCLYQYQPAHYHNQYLDRF 316 Query: 346 SLKGLMG 352 G++G Sbjct: 317 VKNGVIG 323 >UniRef50_Q3B1X3 Putative uncharacterized protein n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B1X3_PELLD Length = 410 Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 13/126 (10%) Query: 209 LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIV--LLIAILASIVIIFNKPIQNRY 266 L LTQ RA + F ++ V A+ Y+ S +++ + +V +++A L + F+ + R Sbjct: 200 LFLTQGRAGHVAFFVVAVIAVFQYF--SGRRWVAGLVSLVMVAGLFTAAYTFSDAFKGRL 257 Query: 267 NEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF------SFRSAESRA-ESMN-L 318 +A++D N Y NS TS+G R+ + IF + P FR +R E M+ Sbjct: 258 GQAVSDSNGYEMTNS-TSVGTRITFVLNSMEIFKEHPLIGVGTGDFRVEYARMNERMSPA 316 Query: 319 LVAEHN 324 + A HN Sbjct: 317 MPATHN 322 >UniRef50_C4L785 O-antigen polymerase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L785_TOLAT Length = 416 Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust. Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 26/202 (12%) Query: 160 DRISFGVGTA-------TGAAYSTMLIGIVSGVAILYTKK--NHPFLFLLNSCAVLYVLA 210 DR+ G G A G S M +G++S ++++ K N + ++L VL Sbjct: 131 DRLVTGYGRAFEWMVPIQGGDIS-MTLGLLSLCGVMWSIKTANKGLIVYFALASILGVLG 189 Query: 211 --LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNE 268 L+ +R +LFP+I + + K + L + +L + + + R Sbjct: 190 SILSGSRGGWVLFPVILFVIYRIFKDWFSPKVKLGMGLALCLLVAFCLTPQSGVPTRIAA 249 Query: 269 ALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPF------SFRSAESRAESMNLLVA 321 A +D++ Y + N TSLG R +++ ++ F++ P R ++ + L+ Sbjct: 250 AKSDISLYLSGQNKNTSLGHRFEIWKSSVDSFLEKPLFGWGYHGVRQSQEQQYKQGLITK 309 Query: 322 EHNRLRGALEFSNVHLHNEIIE 343 E A +F N H HN+ ++ Sbjct: 310 E------AYDF-NSHAHNQFLD 324 >UniRef50_A1TYQ8 O-antigen polymerase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TYQ8_MARAV Length = 415 Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Query: 245 VLLIAILASIVII---FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIK 301 V+ +A++AS I+ + PI RY L++L+ ++ TS+G RL M++ LN+ + Sbjct: 227 VITLALVASAAIVSVKYVDPISERYELTLSELDKFSEGQLYTSMGMRLLMWDAALNVITE 286 Query: 302 SP 303 +P Sbjct: 287 AP 288 >UniRef50_UPI00016A36CB O-antigen polymerase n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A36CB Length = 409 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 3/103 (2%) Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNK-SPKKFTSSIVLLIAILASIVIIFNKPI 262 A LY++ +QTR LL PI L+ S K F + L IA +A IV+ + Sbjct: 178 AGLYLVVGSQTRTAYLLIPIAAALWLVLKRPSISAKHFVALAALGIATIA-IVLSLHDDT 236 Query: 263 QNRYNEALNDLNSYTNA-NSVTSLGARLAMYEIGLNIFIKSPF 304 R ++L+ + N N TS G RL M+ + +F++SP+ Sbjct: 237 STRVASIYHELDMWLNGSNRDTSGGLRLTMWHMAWELFLQSPW 279 >UniRef50_C3NSX8 O-antigen ligase n=24 Tax=Vibrio RepID=C3NSX8_VIBCJ Length = 399 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 15/192 (7%) Query: 189 YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI 248 +T+ + L+ A LT TR +L + + I K K T L+ Sbjct: 160 FTQTRFKYYLYLSVVAATVATILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLIS 219 Query: 249 AILASIVIIFNKPIQNRYNEALNDLNSYT--NANSVTSLGARLAMYEIGLNIFIKSPFSF 306 +L S+ F+ IQ R + + +++S N ++ S G RL ++ + F +P + Sbjct: 220 FLLVSVSYQFSPRIQERVDFTIFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPI-W 278 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNV----HLHNEIIEA----GSLKGLMGIFSTLF 358 + S ES+N+ + + ++ E+++ H H++ EA G+L G++ IF+ L Sbjct: 279 GTTYSERESLNIELFKEGKVD---EWTSTVPRGHAHSQYFEAIASNGTL-GILAIFAMLI 334 Query: 359 LYFSLFYIAYKK 370 L F +F Y+K Sbjct: 335 LPFGVFLNDYRK 346 >UniRef50_Q0FYD9 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYD9_9RHIZ Length = 431 Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 9/113 (7%) Query: 262 IQNRYNEALNDLNS-YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 I R + + D+ + + ++++ +S+G R MY G+ ++ P ES + Sbjct: 263 IGYRTQKLIEDVQALFLSSDANSSVGLRAEMYRAGIAALLERPL-LGWGES-----GVWP 316 Query: 321 AEHNRLRGALE--FSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR 371 A RL A FS HLHN I+ G G++GI + + + + + AY++R Sbjct: 317 ALEPRLGAAFADGFSYSHLHNMILTVGVQAGVLGILALIAVLITPVWCAYRQR 369 >UniRef50_A9BR10 O-antigen polymerase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BR10_DELAS Length = 422 Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 66/138 (47%), Gaps = 5/138 (3%) Query: 237 PKKFTSSIVLLIAILASI--VIIFNKPIQNRYNEALNDLNSYTNA-NSVTSLGARLAMYE 293 P+ F ++ AI+ ++ V+ F + R +E D+++Y A NS TSLG RL Y Sbjct: 216 PQYFGRLLLGCAAIVVALATVMAFIPRVSERVDEVYLDVSTYLYAGNSNTSLGTRLEQYR 275 Query: 294 IGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGI 353 + + + + P + + M+ VA + + E++ +HN+ ++ G+ G+ Sbjct: 276 LAVQMIGEKPLLGWGMQGYVDEMHRRVAAGSYGQSIREYN--FIHNDFLDIWVKLGVPGV 333 Query: 354 FSTLFLYFSLFYIAYKKR 371 L+ SL ++ + R Sbjct: 334 LLQAALFISLLWLFWPSR 351 >UniRef50_B6EPB7 O-antigen ligase WaaL n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EPB7_ALISL Length = 408 Score = 42.7 bits (99), Expect = 0.023, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 22/168 (13%) Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI--IFNKPIQNRYNE 268 L+ R LL P + + ++ Y NK + + ++ A+LA+I+ I + I +R + Sbjct: 190 LSGARGAWLLTPFVLL--IVLYLNK---ELINKKIVGYALLAAIIDLSIASAQITSRLDA 244 Query: 269 ALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG 328 +DL Y+ S +S GARL M++ L +SP F S E+ A+ +L Sbjct: 245 IQSDLTQYSAEQSASSSGARLEMWKSALYSAQESPL-FGQGFSGIEA-----AKQRQLDA 298 Query: 329 ------ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 AL++S HN+ +E KG+ G+ S L + F++ + +K+ Sbjct: 299 GLIDPIALKYSRA--HNQYLEDLQTKGIFGL-SVLLIMFAVPFAFFKR 343 >UniRef50_B9MAP4 O-antigen polymerase n=2 Tax=Comamonadaceae RepID=B9MAP4_DIAST Length = 444 Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust. Identities = 37/175 (21%), Positives = 85/175 (48%), Gaps = 10/175 (5%) Query: 176 TMLIGIVS-GVAILYTKKNHPF--LFLLNSCAVLYVLALTQTRATLLLFPIICVA-ALIA 231 M +GI + +A+L + H L + +C VL L L+++R + + P++ A L+A Sbjct: 151 AMYMGIAAWAMAMLGRWRWHQIAALGICGACGVLASL-LSESRGSWVTVPLLLAAIWLMA 209 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY---TNANSVTSLGAR 288 + N + +++I ++ A++V+ K + R + A+ + Y + TS+G R Sbjct: 210 WRNGYRRIASAAIAAMLIGGAALVLPAYKKFEQRADLAVQEARHYLAEPQKYAETSIGQR 269 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIE 343 L + + +++ + P + + ++ +V + +++ H HNEI++ Sbjct: 270 LEQWRLAVDLIEERPVAGWGLDGYPKAKQAMVDKGAAHPSVMQYG--HAHNEILD 322 >UniRef50_A8SMC4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMC4_9FIRM Length = 401 Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 33/210 (15%) Query: 192 KNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAIL 251 +N+ FL S VL LT+ R L P I +A L+ + K+ KK + + + I+ Sbjct: 197 RNNRLYFLCVSTLAFIVLFLTENRTAL---PTILIATLVLSFTKNNKK-VFTFLGIFTIV 252 Query: 252 ASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES 311 I++IF+ I RY N SLG R ++E + +F K F F S Sbjct: 253 IVILMIFSNRIFPRYEFIGN------------SLGTRKEIWENAIKLF-KKTFLFGSGPM 299 Query: 312 RAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY--K 369 ++ + + N H HN +++ G++G L+ +F Y + Sbjct: 300 AYQNASWVSHPAN-----------HAHNIVLDLLINFGIVGNIIIFPLFIGIFKKVYSIR 348 Query: 370 KRALGLLILTLGIVGI--GLSDV-IIWARS 396 KR L LI+ L +V I G+ DV I+W ++ Sbjct: 349 KRNLFRLIIALTVVVILHGMLDVTILWHQT 378 >UniRef50_A5KZV1 Putative O-antigen ligase n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZV1_9GAMM Length = 399 Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 19/192 (9%) Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPK---KFTSSIVLLIAILASIVIIFNKPIQNRYN 267 L++ R L F + LIA K+P K S V + ++ +F + I RY Sbjct: 187 LSEARGIWLAFSLSIFFILIAKCIKNPPSKSKVLLSFVFTAVLTSTGAFLFKEKINERYE 246 Query: 268 EALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLR 327 + + ++ + + TS+G RL M+ + + + P E R + R Sbjct: 247 KTIYEIERIQSNDYSTSIGLRLKMWMLVPELIKQKPILGHGQEQRE------ILRSKLKR 300 Query: 328 GALE-----FSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGI 382 G + F++ H HN+ ++ G++G+ + L I K +L I+ +G+ Sbjct: 301 GEISHQLFYFASAHYHNQFLDKMVKSGVIGLTLVIGLLIYPLMIVKKLPSLDTYIV-IGL 359 Query: 383 VGI----GLSDV 390 V + GL+DV Sbjct: 360 VSLFFIAGLTDV 371 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P27243 O-antigen ligase n=5 Tax=Escherichia coli RepID=... 387 e-106 UniRef50_A8ARL1 Putative uncharacterized protein n=2 Tax=Citroba... 276 1e-72 UniRef50_Q9ZIT0 Lipid A-core:surface polymer ligase WaaL n=26 Ta... 271 3e-71 UniRef50_Q6DAU1 O-antigen ligase n=1 Tax=Pectobacterium atrosept... 269 1e-70 UniRef50_D0KD48 O-antigen polymerase n=3 Tax=Pectobacterium RepI... 266 8e-70 UniRef50_Q4QTN0 WaaL n=1 Tax=Klebsiella pneumoniae RepID=Q4QTN0_... 266 9e-70 UniRef50_D0KD50 O-antigen polymerase n=1 Tax=Pectobacterium wasa... 264 3e-69 UniRef50_Q9ZIS3 Lipid A-core:surface polymer ligase WaaL n=3 Tax... 260 9e-68 UniRef50_B2VF67 Lipid A core, surface polymer ligase WaaL n=5 Ta... 257 5e-67 UniRef50_B6XJV7 Putative uncharacterized protein n=1 Tax=Provide... 249 2e-64 UniRef50_Q7NZV1 Probable O-antigen ligase; lipopolysaccharide co... 176 2e-42 UniRef50_C6P739 O-antigen polymerase n=1 Tax=Sideroxydans lithot... 165 2e-39 UniRef50_C9Y384 Putative uncharacterized protein n=1 Tax=Cronoba... 161 4e-38 UniRef50_B5SFB1 Lipopolysaccharide o-antigen ligase protein n=4 ... 157 6e-37 UniRef50_Q0K7R4 Membrane spanning protein involved in lipopolysa... 155 2e-36 UniRef50_B2U905 O-antigen polymerase n=2 Tax=Ralstonia pickettii... 147 8e-34 UniRef50_B6A4C0 O-antigen polymerase n=11 Tax=Rhizobium RepID=B6... 139 2e-31 UniRef50_B8K678 Putative O-antigen ligase n=1 Tax=Vibrio parahae... 138 5e-31 UniRef50_C8Q870 Putative uncharacterized protein n=1 Tax=Pantoea... 137 6e-31 UniRef50_A9IRJ0 Membrane protein resembling polysaccharide polym... 137 6e-31 UniRef50_C9P0H7 O-antigen ligase n=1 Tax=Vibrio coralliilyticus ... 137 1e-30 UniRef50_B7X132 O-antigen polymerase n=1 Tax=Comamonas testoster... 133 1e-29 UniRef50_C5V1T7 O-antigen polymerase n=1 Tax=Gallionella ferrugi... 132 3e-29 UniRef50_C6MBK9 O-antigen polymerase n=1 Tax=Nitrosomonas sp. AL... 129 2e-28 UniRef50_Q2YBZ5 O-antigen polymerase n=2 Tax=Nitrosospira multif... 127 9e-28 UniRef50_Q1LJU1 O-antigen polymerase n=1 Tax=Cupriavidus metalli... 120 1e-25 UniRef50_A3UQU5 RfaL protein n=1 Tax=Vibrio splendidus 12B01 Rep... 117 1e-24 UniRef50_Q474P4 O-antigen polymerase n=1 Tax=Ralstonia eutropha ... 116 1e-24 UniRef50_A5EUW2 O-antigen ligase n=1 Tax=Dichelobacter nodosus V... 116 1e-24 UniRef50_A1AXG4 O-antigen polymerase n=1 Tax=Candidatus Ruthia m... 115 2e-24 UniRef50_A8T0D4 Putative O-antigen ligase n=1 Tax=Vibrio sp. AND... 115 4e-24 UniRef50_Q0AIV7 O-antigen polymerase n=2 Tax=Nitrosomonas RepID=... 112 3e-23 UniRef50_P44067 Uncharacterized protein HI0874 n=5 Tax=Pasteurel... 111 6e-23 UniRef50_B7VTJ0 Putative O-antigen ligase n=2 Tax=Vibrio RepID=B... 109 2e-22 Sequences not found previously or not previously below threshold: UniRef50_D1T571 O-antigen polymerase n=3 Tax=Burkholderia RepID=... 118 5e-25 UniRef50_B9MAP4 O-antigen polymerase n=2 Tax=Comamonadaceae RepI... 114 5e-24 UniRef50_Q65W10 RfaL protein n=2 Tax=Pasteurellaceae RepID=Q65W1... 113 9e-24 UniRef50_A5KZV1 Putative O-antigen ligase n=1 Tax=Vibrionales ba... 113 1e-23 UniRef50_Q1YWB6 Putative O-antigen ligase n=2 Tax=Photobacterium... 113 1e-23 UniRef50_D0IMS5 O-antigen ligase n=11 Tax=Vibrio RepID=D0IMS5_9VIBR 113 1e-23 UniRef50_D0Z1E7 O-antigen ligase n=1 Tax=Photobacterium damselae... 110 7e-23 UniRef50_A6VLR5 O-antigen polymerase n=1 Tax=Actinobacillus succ... 110 1e-22 UniRef50_C8SG72 O-antigen polymerase n=1 Tax=Mesorhizobium oppor... 109 2e-22 UniRef50_B5JVL1 O-Antigen Polymerase family n=1 Tax=gamma proteo... 109 2e-22 UniRef50_A0KQV1 O-antigen polymerase n=5 Tax=Aeromonas RepID=A0K... 108 3e-22 UniRef50_C4L785 O-antigen polymerase n=1 Tax=Tolumonas auensis D... 108 4e-22 UniRef50_C4KCH4 O-antigen polymerase n=1 Tax=Thauera sp. MZ1T Re... 103 1e-20 UniRef50_B6EPB7 O-antigen ligase WaaL n=1 Tax=Aliivibrio salmoni... 103 1e-20 UniRef50_C2HRF0 O-antigen ligase n=1 Tax=Vibrio cholerae bv. alb... 103 1e-20 UniRef50_Q9CJX6 Putative uncharacterized protein n=1 Tax=Pasteur... 102 2e-20 UniRef50_C8N937 Putative uncharacterized protein n=1 Tax=Cardiob... 102 2e-20 UniRef50_A1WKR6 O-antigen polymerase n=1 Tax=Verminephrobacter e... 102 3e-20 UniRef50_A7JUL1 Possible O-antigen ligase n=12 Tax=Pasteurellace... 102 3e-20 UniRef50_C3NSX8 O-antigen ligase n=24 Tax=Vibrio RepID=C3NSX8_VIBCJ 102 4e-20 UniRef50_C9R1T3 RfaL protein n=1 Tax=Aggregatibacter actinomycet... 102 4e-20 UniRef50_A1SRT4 O-antigen polymerase n=1 Tax=Psychromonas ingrah... 101 4e-20 UniRef50_A9BR10 O-antigen polymerase n=1 Tax=Delftia acidovorans... 101 5e-20 UniRef50_C9P8T9 RfaL protein n=1 Tax=Vibrio metschnikovii CIP 69... 100 8e-20 UniRef50_D0IC13 O-antigen ligase n=1 Tax=Grimontia hollisae CIP ... 100 2e-19 UniRef50_A3N1D5 Putative uncharacterized protein n=6 Tax=Actinob... 99 3e-19 UniRef50_Q985Q6 Mll7573 protein n=1 Tax=Mesorhizobium loti RepID... 98 6e-19 UniRef50_Q1ZLP1 RfaL protein n=2 Tax=Photobacterium RepID=Q1ZLP1... 98 7e-19 UniRef50_B9BDB2 Putative membrane protein n=3 Tax=Burkholderia m... 93 1e-17 UniRef50_A6FBF0 Putative O-antigen ligase n=1 Tax=Moritella sp. ... 93 2e-17 UniRef50_B2SL57 O-Antigen Polymerase family n=11 Tax=Xanthomonad... 92 4e-17 UniRef50_Q0FYD9 Putative uncharacterized protein n=1 Tax=Fulvima... 92 5e-17 UniRef50_Q2L1I7 Putative O-antigen polymerase n=1 Tax=Bordetella... 90 2e-16 UniRef50_C9PJM0 O-antigen ligase n=1 Tax=Vibrio furnissii CIP 10... 89 3e-16 UniRef50_Q1ZGS6 Putative O-antigen ligase n=1 Tax=Psychromonas s... 87 1e-15 UniRef50_Q11IK5 O-antigen polymerase n=1 Tax=Chelativorans sp. B... 86 2e-15 UniRef50_A1HMD6 O-antigen polymerase n=1 Tax=Thermosinus carboxy... 86 2e-15 UniRef50_A4BIW8 RfaL protein n=1 Tax=Reinekea blandensis MED297 ... 86 2e-15 UniRef50_A9IHC6 LPS ligase-like protein n=1 Tax=Bordetella petri... 85 3e-15 UniRef50_UPI00016A36CB O-antigen polymerase n=1 Tax=Burkholderia... 84 7e-15 UniRef50_A1W2G4 O-antigen polymerase n=3 Tax=Acidovorax RepID=A1... 84 7e-15 UniRef50_Q31FH0 O-antigen polymerase n=1 Tax=Thiomicrospira crun... 84 8e-15 UniRef50_C1SIP4 Lipid A core-O-antigen ligase-like enyme n=1 Tax... 83 2e-14 UniRef50_B7J3X6 O-antigen polymerase family protein n=2 Tax=Acid... 83 2e-14 UniRef50_Q9ZM38 Putative n=15 Tax=Helicobacter RepID=Q9ZM38_HELPJ 83 2e-14 UniRef50_A9AJI5 Putative O-antigen polymerase n=1 Tax=Burkholder... 82 3e-14 UniRef50_B2IAL7 O-antigen polymerase n=7 Tax=Xylella fastidiosa ... 82 3e-14 UniRef50_C9QDI3 O-antigen ligase n=1 Tax=Vibrio orientalis CIP 1... 82 4e-14 UniRef50_C4V160 O-antigen polymerase n=1 Tax=Selenomonas fluegge... 82 4e-14 UniRef50_A9CZZ0 RfaL protein n=1 Tax=Hoeflea phototrophica DFL-4... 80 1e-13 UniRef50_A7BYU7 O-antigen polymerase n=1 Tax=Beggiatoa sp. PS Re... 80 2e-13 UniRef50_A3JEK5 Putative O-antigen ligase n=1 Tax=Marinobacter s... 79 5e-13 UniRef50_A6SUC2 Uncharacterized conserved protein n=1 Tax=Janthi... 78 7e-13 UniRef50_UPI0001BCF229 O-antigen polymerase n=1 Tax=Selenomonas ... 77 1e-12 UniRef50_Q1N5A2 Putative uncharacterized protein n=1 Tax=Bermane... 77 1e-12 UniRef50_Q01Z28 O-antigen polymerase n=1 Tax=Candidatus Solibact... 76 2e-12 UniRef50_B3ELM8 O-antigen polymerase n=1 Tax=Chlorobium phaeobac... 74 8e-12 UniRef50_B5WDI1 O-antigen polymerase n=1 Tax=Burkholderia sp. H1... 74 9e-12 UniRef50_Q1Q4N8 Similar to lipid A core O-antigen ligase related... 74 1e-11 UniRef50_C9KNY6 Inorganic carbon transporter n=2 Tax=Veillonella... 73 2e-11 UniRef50_B4SKH3 O-antigen polymerase n=2 Tax=Stenotrophomonas ma... 73 2e-11 UniRef50_Q5ZXB0 O-antigen biosynthesis protein n=4 Tax=Legionell... 73 2e-11 UniRef50_Q1QWW2 O-antigen polymerase n=1 Tax=Chromohalobacter sa... 72 3e-11 UniRef50_A1TYQ8 O-antigen polymerase n=1 Tax=Marinobacter aquaeo... 72 3e-11 UniRef50_C5T763 O-antigen polymerase n=1 Tax=Acidovorax delafiel... 72 3e-11 UniRef50_Q30PV6 O-antigen polymerase n=1 Tax=Sulfurimonas denitr... 72 4e-11 UniRef50_B6BIX9 O-Antigen Polymerase family protein n=1 Tax=Camp... 72 4e-11 UniRef50_A4G2D6 Putative uncharacterized protein n=1 Tax=Hermini... 71 7e-11 UniRef50_Q6MMF8 Putative O-antigen ligase WaaL n=1 Tax=Bdellovib... 71 8e-11 UniRef50_B2JE45 O-antigen polymerase n=2 Tax=Burkholderia RepID=... 70 1e-10 UniRef50_A9KDI8 O-antigen ligase n=6 Tax=Coxiella burnetii RepID... 69 2e-10 UniRef50_A6C2I1 Putative uncharacterized protein n=1 Tax=Plancto... 69 2e-10 UniRef50_A9AZ26 O-antigen polymerase n=1 Tax=Herpetosiphon auran... 69 3e-10 UniRef50_Q5E8K0 O-antigen ligase n=1 Tax=Vibrio fischeri ES114 R... 69 3e-10 UniRef50_B1ZQU0 O-antigen polymerase n=1 Tax=Opitutus terrae PB9... 69 4e-10 UniRef50_D1B406 O-antigen polymerase n=1 Tax=Sulfurospirillum de... 69 4e-10 UniRef50_A6VTJ6 O-antigen polymerase n=1 Tax=Marinomonas sp. MWY... 69 5e-10 UniRef50_Q1QJM5 O-antigen polymerase n=4 Tax=Bradyrhizobiaceae R... 68 5e-10 UniRef50_A6DE46 O-antigen polymerase n=1 Tax=Caminibacter mediat... 68 5e-10 UniRef50_C9LXH7 Putative O-antigen polymerase n=1 Tax=Selenomona... 68 5e-10 UniRef50_A6QBN3 Putative uncharacterized protein n=1 Tax=Sulfuro... 68 6e-10 UniRef50_A4JGJ5 O-antigen polymerase n=17 Tax=Burkholderia RepID... 68 8e-10 UniRef50_C3WA18 Predicted protein n=1 Tax=Fusobacterium mortifer... 67 1e-09 UniRef50_Q3B1X3 Putative uncharacterized protein n=1 Tax=Chlorob... 67 2e-09 UniRef50_C9LNB5 Inorganic carbon transporter/0-antigen polymeras... 66 2e-09 UniRef50_D1BNH3 O-antigen polymerase n=3 Tax=Veillonella RepID=D... 66 3e-09 UniRef50_A4ACC3 O-antigen polymerase n=2 Tax=unclassified Gammap... 66 3e-09 UniRef50_A8PNA9 O-Antigen Polymerase family n=1 Tax=Rickettsiell... 65 4e-09 UniRef50_C1I9Q4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 65 4e-09 UniRef50_A3ERX2 O-antigen polymerase n=2 Tax=Leptospirillum sp. ... 65 5e-09 UniRef50_C8PLC3 O-antigen polymerase family protein n=1 Tax=Camp... 65 6e-09 UniRef50_C7LVM7 O-antigen polymerase n=1 Tax=Desulfomicrobium ba... 65 6e-09 UniRef50_B2KDP4 O-antigen polymerase n=1 Tax=Elusimicrobium minu... 65 6e-09 UniRef50_B8CZB5 O-antigen polymerase n=1 Tax=Halothermothrix ore... 65 6e-09 UniRef50_A4G2M7 Putative uncharacterized protein n=1 Tax=Hermini... 64 8e-09 UniRef50_A9DNM3 Secreted polysaccharide polymerase n=1 Tax=Kordi... 64 8e-09 UniRef50_C6MZJ1 O-antigen biosynthesis protein n=2 Tax=Legionell... 64 8e-09 UniRef50_C0WB04 Predicted protein n=1 Tax=Acidaminococcus sp. D2... 64 8e-09 UniRef50_C7HY66 O-antigen polymerase n=1 Tax=Thiomonas intermedi... 64 9e-09 UniRef50_C1XLK8 Lipid A core-O-antigen ligase-like enyme n=1 Tax... 64 1e-08 UniRef50_D2RIJ5 O-antigen polymerase n=1 Tax=Acidaminococcus fer... 64 1e-08 UniRef50_A6WWI6 O-antigen polymerase n=2 Tax=Ochrobactrum RepID=... 64 1e-08 UniRef50_A5FG38 O-antigen polymerase n=1 Tax=Flavobacterium john... 64 1e-08 UniRef50_Q2P774 Membrane protein n=23 Tax=Xanthomonadaceae RepID... 63 2e-08 UniRef50_C3WC59 Predicted protein n=3 Tax=Fusobacterium mortifer... 63 2e-08 UniRef50_B9XBG9 O-antigen polymerase n=1 Tax=bacterium Ellin514 ... 63 2e-08 UniRef50_A4BMB8 Putative uncharacterized protein n=1 Tax=Nitroco... 62 3e-08 UniRef50_A3EV53 Putative O-antigen polymerase n=2 Tax=Leptospiri... 62 3e-08 UniRef50_A6GLX2 Putative uncharacterized protein n=1 Tax=Limnoba... 62 3e-08 UniRef50_Q1NRK6 O-antigen polymerase n=2 Tax=delta proteobacteri... 62 3e-08 UniRef50_B4AYT6 O-antigen polymerase n=1 Tax=Cyanothece sp. PCC ... 62 3e-08 UniRef50_C6HYN6 O-antigen polymerase n=1 Tax=Leptospirillum ferr... 62 3e-08 UniRef50_C5S7S9 O-antigen polymerase n=1 Tax=Allochromatium vino... 62 3e-08 UniRef50_C8QZX5 O-antigen polymerase n=1 Tax=Desulfurivibrio alk... 62 4e-08 UniRef50_C7LP51 O-antigen polymerase n=1 Tax=Desulfomicrobium ba... 62 4e-08 UniRef50_Q1PVJ3 Putative uncharacterized protein n=1 Tax=Candida... 62 5e-08 UniRef50_Q7NME7 Glr0819 protein n=1 Tax=Gloeobacter violaceus Re... 62 5e-08 UniRef50_B2SCS0 Blood group Rhesus C/E and D polypeptide n=35 Ta... 62 6e-08 UniRef50_Q4KJB3 O-antigen polymerase family protein/toluene tole... 62 6e-08 UniRef50_B5YEZ0 Tetratricopeptide repeat domain protein n=1 Tax=... 62 6e-08 UniRef50_A8EVT1 Putative O-antigen polymerase n=1 Tax=Arcobacter... 61 6e-08 UniRef50_A1K7Y0 Hypothetical membrane protein n=1 Tax=Azoarcus s... 61 1e-07 UniRef50_C9LPH8 O-antigen polymerase family protein n=1 Tax=Dial... 61 1e-07 UniRef50_Q97GP8 Membrane protein of EXOQ family, involved in exo... 61 1e-07 UniRef50_A8F5A6 O-antigen polymerase n=1 Tax=Thermotoga lettinga... 61 1e-07 UniRef50_A9A0F8 O-antigen polymerase n=1 Tax=Desulfococcus oleov... 61 1e-07 UniRef50_A6LHH5 Putative membrane protein n=3 Tax=Bacteroidales ... 60 1e-07 UniRef50_Q2BMR7 Probable transcriptional regulator SyrB n=1 Tax=... 60 1e-07 UniRef50_B0C275 O-Antigen polymerase, putative n=1 Tax=Acaryochl... 60 1e-07 UniRef50_A6LK62 O-antigen polymerase n=1 Tax=Thermosipho melanes... 60 1e-07 UniRef50_D1CIX2 O-antigen polymerase n=1 Tax=Thermobaculum terre... 60 1e-07 UniRef50_D2UC28 Probable lipid a core-o-antigen ligase protein n... 60 1e-07 UniRef50_P73958 Slr1515 protein n=1 Tax=Synechocystis sp. PCC 68... 60 1e-07 UniRef50_C6I0F5 O-antigen polymerase n=1 Tax=Leptospirillum ferr... 60 1e-07 UniRef50_A8ZZ87 O-antigen polymerase n=1 Tax=Desulfococcus oleov... 60 1e-07 UniRef50_Q3SHP5 Putative uncharacterized protein n=1 Tax=Thiobac... 60 2e-07 UniRef50_C6DZV8 O-antigen polymerase n=1 Tax=Geobacter sp. M21 R... 60 2e-07 UniRef50_A4WY14 Polysaccharide deacetylase n=1 Tax=Rhodobacter s... 60 2e-07 UniRef50_UPI000174580F hypothetical protein VspiD_02685 n=1 Tax=... 59 2e-07 UniRef50_C1XMI1 Lipid A core-O-antigen ligase-like enyme n=1 Tax... 59 2e-07 UniRef50_C8P120 Putative uncharacterized protein n=1 Tax=Erysipe... 59 3e-07 UniRef50_B9XBX6 O-antigen polymerase n=1 Tax=bacterium Ellin514 ... 59 3e-07 UniRef50_UPI0001C33463 probable bicarbonate transporter, IctB fa... 59 4e-07 UniRef50_A1HP47 O-antigen polymerase n=1 Tax=Thermosinus carboxy... 59 4e-07 UniRef50_A7A9I9 Putative uncharacterized protein n=2 Tax=Parabac... 59 4e-07 UniRef50_B5UQ63 O-antigen polymerase, putative n=1 Tax=Bacillus ... 59 4e-07 UniRef50_C6BCQ9 O-antigen polymerase n=1 Tax=Ralstonia pickettii... 59 5e-07 UniRef50_A9B578 O-antigen polymerase n=1 Tax=Herpetosiphon auran... 59 5e-07 UniRef50_C1D4Z1 O-antigen polymerase n=1 Tax=Laribacter hongkong... 59 5e-07 UniRef50_C4V4R3 O-antigen polymerase n=1 Tax=Selenomonas fluegge... 58 6e-07 UniRef50_Q8A281 Putative uncharacterized protein n=2 Tax=Bactero... 58 6e-07 UniRef50_Q1ZHF3 Putative uncharacterized protein n=1 Tax=Psychro... 58 6e-07 UniRef50_B8F9U4 O-antigen polymerase n=1 Tax=Desulfatibacillum a... 58 6e-07 UniRef50_C0QH03 O-antigen polymerase involved in exopolysacchari... 58 7e-07 UniRef50_C9Y124 Putative uncharacterized protein n=1 Tax=Cronoba... 58 7e-07 UniRef50_B8GCP3 O-antigen polymerase n=3 Tax=Chloroflexus RepID=... 58 8e-07 UniRef50_UPI000197B9DC hypothetical protein BACCOPRO_00097 n=1 T... 58 8e-07 UniRef50_B3C9M5 Putative uncharacterized protein n=8 Tax=Bactero... 58 8e-07 UniRef50_Q12AK2 O-antigen polymerase n=1 Tax=Polaromonas sp. JS6... 57 9e-07 UniRef50_A6T1Z8 Uncharacterized conserved protein n=1 Tax=Janthi... 57 9e-07 UniRef50_C0N914 O-Antigen Polymerase family n=1 Tax=Methylophaga... 57 1e-06 UniRef50_A1VNY4 O-antigen polymerase n=2 Tax=Polaromonas RepID=A... 57 1e-06 UniRef50_B5EA98 O-antigen polymerase n=1 Tax=Geobacter bemidjien... 57 1e-06 UniRef50_D2L620 O-antigen polymerase n=1 Tax=Desulfovibrio sp. F... 57 1e-06 UniRef50_Q2LRM7 O-antigen polymerase n=1 Tax=Syntrophus aciditro... 57 1e-06 UniRef50_Q01S31 O-antigen polymerase n=1 Tax=Candidatus Solibact... 57 1e-06 UniRef50_A8VKG3 Wzy n=2 Tax=Gammaproteobacteria RepID=A8VKG3_VIBVU 57 1e-06 UniRef50_C5CXB6 O-antigen polymerase n=1 Tax=Variovorax paradoxu... 57 1e-06 UniRef50_C3KDB6 Putative membrane protein n=1 Tax=Pseudomonas fl... 57 2e-06 UniRef50_D1C2X5 O-antigen polymerase n=1 Tax=Sphaerobacter therm... 56 2e-06 UniRef50_A7AIE4 Putative uncharacterized protein n=5 Tax=Bactero... 56 2e-06 UniRef50_D1Y330 O-Antigen Polymerase family protein n=1 Tax=Pyra... 56 3e-06 UniRef50_B9KZC7 O-Antigen Polymerase family n=1 Tax=Thermomicrob... 56 3e-06 UniRef50_C2FRP7 O-antigen polymerase n=2 Tax=Sphingobacterium sp... 56 3e-06 UniRef50_D1BLV4 O-antigen polymerase n=3 Tax=Veillonella RepID=D... 56 3e-06 UniRef50_B5FFG9 O-antigen polymerase, putative n=1 Tax=Vibrio fi... 56 3e-06 UniRef50_B2HZX0 Lipid A core-O-antigen ligase n=8 Tax=Acinetobac... 55 3e-06 UniRef50_B0N8X1 Putative uncharacterized protein n=3 Tax=Bacteri... 55 3e-06 UniRef50_B7GVQ4 O-Antigen Polymerase family protein n=5 Tax=Acin... 55 4e-06 UniRef50_C6JNS2 Putative uncharacterized protein n=1 Tax=Fusobac... 55 4e-06 UniRef50_B5YIP3 O-Antigen Polymerase family n=1 Tax=Thermodesulf... 55 4e-06 UniRef50_B4CZW4 O-antigen polymerase n=1 Tax=Chthoniobacter flav... 55 4e-06 UniRef50_C6CP08 O-antigen polymerase n=2 Tax=Dickeya RepID=C6CP0... 55 4e-06 UniRef50_B8IY99 O-antigen polymerase n=1 Tax=Desulfovibrio desul... 55 4e-06 UniRef50_C5NWF6 Licd protein n=1 Tax=Gemella haemolysans ATCC 10... 55 4e-06 UniRef50_C1F2S5 O-antigen polymerase family protein n=1 Tax=Acid... 55 4e-06 UniRef50_B5EPG9 O-antigen polymerase n=2 Tax=Acidithiobacillus f... 55 5e-06 UniRef50_C6NU14 O-antigen polymerase n=1 Tax=Acidithiobacillus c... 55 5e-06 UniRef50_Q72GL1 Hypothetical membrane spanning protein n=1 Tax=T... 55 5e-06 UniRef50_A1SRW5 O-antigen polymerase n=1 Tax=Psychromonas ingrah... 55 6e-06 UniRef50_B5LBK8 Putative phosphotransferase LicD4 n=1 Tax=Strept... 55 6e-06 UniRef50_Q0B1E1 O-antigen polymerase n=9 Tax=Burkholderia RepID=... 55 7e-06 UniRef50_B5YJ59 O-Antigen Polymerase family n=1 Tax=Thermodesulf... 55 7e-06 UniRef50_Q3SPX7 O-antigen polymerase n=2 Tax=Nitrobacter RepID=Q... 55 7e-06 UniRef50_Q11XH7 Lipid A core--O-antigen ligase n=1 Tax=Cytophaga... 55 7e-06 UniRef50_C6LCR5 O-antigen polymerase family protein n=1 Tax=Brya... 54 9e-06 UniRef50_D1CAK4 O-antigen polymerase n=1 Tax=Sphaerobacter therm... 54 9e-06 UniRef50_D2U323 O-antigen ligase n=1 Tax=Arsenophonus nasoniae R... 54 1e-05 UniRef50_B2RKC6 Putative uncharacterized protein n=2 Tax=Porphyr... 54 1e-05 UniRef50_C6PW82 O-antigen polymerase n=3 Tax=Clostridium RepID=C... 54 1e-05 UniRef50_A4C652 Membrane protein of EXOQ family, involved in exo... 54 1e-05 UniRef50_D1YM01 O-antigen polymerase n=1 Tax=Veillonella parvula... 54 1e-05 UniRef50_A2TSG4 TPR domain protein n=1 Tax=Dokdonia donghaensis ... 54 1e-05 UniRef50_B1LZH5 Putative uncharacterized protein n=1 Tax=Methylo... 54 1e-05 UniRef50_B4RUZ9 Secreted polysaccharide polymerase n=1 Tax=Alter... 54 1e-05 UniRef50_A8SMC4 Putative uncharacterized protein n=1 Tax=Parvimo... 54 1e-05 UniRef50_C6MKH1 O-antigen polymerase n=1 Tax=Geobacter sp. M18 R... 54 1e-05 UniRef50_C9KUN2 O-antigen polymerase family protein n=1 Tax=Bact... 54 2e-05 UniRef50_B4B3W0 O-antigen polymerase n=1 Tax=Cyanothece sp. PCC ... 53 2e-05 UniRef50_B0THF5 O-antigen polymerase family protein n=1 Tax=Heli... 53 2e-05 UniRef50_C6C6R7 O-antigen polymerase n=1 Tax=Dickeya dadantii Ec... 53 2e-05 UniRef50_C8WZW4 O-antigen polymerase n=1 Tax=Desulfohalobium ret... 53 2e-05 UniRef50_Q2JJF2 O-antigen polymerase family protein n=2 Tax=Syne... 53 2e-05 UniRef50_C4TSW9 O-antigen biosynthesis protein n=1 Tax=Yersinia ... 53 2e-05 UniRef50_C0QCL9 RfaL n=2 Tax=Deltaproteobacteria RepID=C0QCL9_DESAH 53 2e-05 UniRef50_Q3J9S9 O-antigen polymerase n=2 Tax=Nitrosococcus ocean... 53 3e-05 >UniRef50_P27243 O-antigen ligase n=5 Tax=Escherichia coli RepID=RFAL_ECOLI Length = 419 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 419/419 (100%), Positives = 419/419 (100%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL Sbjct: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 Query: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV Sbjct: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 Query: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG Sbjct: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 Query: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF Sbjct: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 Query: 241 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI 300 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI Sbjct: 241 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI 300 Query: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY Sbjct: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 Query: 361 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN Sbjct: 361 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 >UniRef50_A8ARL1 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=A8ARL1_CITK8 Length = 427 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 116/399 (29%), Positives = 207/399 (51%), Gaps = 8/399 (2%) Query: 20 ILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF 79 ++ + Y C ++ + ++ ++K++ A++ L + + + KNL+LP+ + Sbjct: 21 VIYFLFYAGCLTTLAMLLINPDEALKVFIACAVLSLPIIGKHSKSLLSDKKNLLLPVMLL 80 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 L GL+ +IW FK S F Y SY N K+ IF + I L S + + + Sbjct: 81 LFGLVQIIWVEIFKEPGSSFTGAYRSYQNGGKVMIFAALIA-TALQSPIACAMKDRITRY 139 Query: 140 YSLS-----FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH 194 + ++ +L AGY + + N R+ G TGAAY+ + +++ AI+ + H Sbjct: 140 WVITTAVGLYLFAGYQLLTSPDPLNYRVELGFEHPTGAAYALTFVALLASQAIINLRLKH 199 Query: 195 P-FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 L+LL+ L V+ +TQTRA +L++P++ + +Y + +++ I + Sbjct: 200 TILLYLLHFLVSLAVITITQTRAAILVYPVLSIGLFFLHYRHNRTVLLRTLLAFIVLAGL 259 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 I I+ RYN + D++SY+ NS TS+GARLAM G++ + +S E R Sbjct: 260 AAIPLKSVIEKRYNSFVTDMHSYSKKNSNTSIGARLAMQRAGIDAGKNH-YWGQSLEQRD 318 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL 373 M + LRGAL F ++HLHNE I+ SLKG+ G+ + LFLY ++F AY +R+ Sbjct: 319 AGMRDFARQDTSLRGALGFVDIHLHNEFIDTFSLKGISGVIALLFLYLAMFLKAYTQRSP 378 Query: 374 GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 L I++ IV GLSD++++A+ + + A+ +++ Sbjct: 379 LLFIISSAIVIYGLSDLLLYAKGETLSSMLALCAAMMLT 417 >UniRef50_Q9ZIT0 Lipid A-core:surface polymer ligase WaaL n=26 Tax=Enterobacteriaceae RepID=Q9ZIT0_ECOLX Length = 417 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 106/388 (27%), Positives = 198/388 (51%), Gaps = 9/388 (2%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 ILC FS++ + + + K + I+ L + ++ N L++ +S+ L+G++++ Sbjct: 18 ILCIFSLMTLSLWDDVATKFLHAAGIISALYFLATPKKTITNNPTLLIFISLCLLGIVNI 77 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKK----ESVLYTLYSL 142 IWYS +KV S + Y + T KI + +FI + K + +L+ + Sbjct: 78 IWYSHYKVSGSVYTNAYRGPMETGKIALCSAFIFLVLFAKNEMRTKIKFGKLILFASLAT 137 Query: 143 SFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP-FLFLLN 201 L +AM+ + DR++ AT A Y + +++ + IL + H L+ +N Sbjct: 138 QLLFFAHAMWQHFYLNVDRVALSASHATTAGYIILFPSLLASILILKSDFRHKTTLYTIN 197 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 L + +T+TRA +L+FP + ++ + + + L + V F Sbjct: 198 FMLSLCAVIVTETRAAILVFPFFALILIVMDSYINKRINYKLYCFITIALLAGVFSFKDT 257 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 + R N+ NDL +Y++ N+ TS+GARLAMYE+GL + +S E RAE ++ L Sbjct: 258 LLMRMNDLNNDLVNYSHDNTRTSVGARLAMYEVGLKTYSP---IGQSLEKRAEKIHELEE 314 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK-KRALGLLILTL 380 + RL GAL + + HLHN++I+ S +G+ G+ T+ + ++ A + + +LIL Sbjct: 315 KEPRLSGALPYVDSHLHNDLIDTLSTRGIPGVVLTILAFSAILIYALRTAKEPYILILLF 374 Query: 381 GIVGIGLSDVIIWARSIPIIIISAIVLL 408 ++ +GLSDVI++++ +P + I+LL Sbjct: 375 SLLVVGLSDVILFSKPVPTAVFITIILL 402 >UniRef50_Q6DAU1 O-antigen ligase n=1 Tax=Pectobacterium atrosepticum RepID=Q6DAU1_ERWCT Length = 408 Score = 269 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 127/399 (31%), Positives = 204/399 (51%), Gaps = 13/399 (3%) Query: 28 LCFFSMIIAFVDNTFSIK----IYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 L + S+II+ + F +K I+N I+ + L + R+ +++++PLSI + + Sbjct: 16 LIYTSLIISLIAMIFDVKLASKIFNTIGIISAILLFINKRE--IKKESMLIPLSILFLCV 73 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSK-KESVLYTLYSL 142 +LIW +K S YHSY N KI GS + +T K ++ L +Y++ Sbjct: 74 TNLIWEQLYKNSGSEIIGLYHSYHNVMKILFLGSSLTLFVMTFSSKHPLTKNALNIIYTI 133 Query: 143 SFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIV-SGVAILYTKKNHPFLFLLN 201 F + Y + R S AT +AY IGI+ S V +L T+K + F + +N Sbjct: 134 PFFLVLYYLLSEPE---VRFSISDKIATSSAYMISFIGILTSQVILLKTEKRNLFFYFIN 190 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 ++ L+ TRA +L +P++ LI K K I+L I + ++ K Sbjct: 191 HIIFFTIIVLSGTRAAILAYPLLSAIVLIPAILKDKKINLKLIILYIMVNIVCLVACQKT 250 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 I +R ++D+N Y +NS +S+GAR+AMY GL FI +P +SAESR + Sbjct: 251 IMSRSENLISDINMYNQSNSESSVGARIAMYRSGLTSFIHAPM-GQSAESRQLDIQKQAE 309 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI-AYKKRALGLLILTL 380 ++ L GA + +HLHNE+IEA SLKG++G + L LY SLFY ++ + L LTL Sbjct: 310 QNPSLSGAALLTGIHLHNELIEAISLKGIIGGMALLLLYASLFYFSSFILKDYALTSLTL 369 Query: 381 GIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 +V GLSDVI + ++ + I L +++ RN + Sbjct: 370 SLVIYGLSDVIFYGKNATTVWIVTYCLSILLVKRNRGVQ 408 >UniRef50_D0KD48 O-antigen polymerase n=3 Tax=Pectobacterium RepID=D0KD48_PECWW Length = 427 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 121/409 (29%), Positives = 206/409 (50%), Gaps = 5/409 (1%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 ML + K ++ S++ L + + C ++ I + + ++ +T + + ++ Sbjct: 11 MLNELRYELGKTPSISSAVALNAV-FPGCLLTLAIMPFSSILAGWLFYLTGSLSVFYVVT 69 Query: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 R + L++PL + IG+ +LIWY + +S F Y++Y +A I G+FIV Sbjct: 70 HLRTVIVAKRRLLIPLCLLAIGITNLIWYYHYYQPDSLFPYVYNAYRTSAHAGILGAFIV 129 Query: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 L + + +K+S+ Y + ++ L YA Y + RI GTAT AAY IG Sbjct: 130 LTALHIRQQQQKQSLFYII-AICVLALSYAFYQSLFSGMHRIGLAFGTATSAAYFLTFIG 188 Query: 181 IVSGVAILYTKKNHPFLFLLN-SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKK 239 +S A+L + + L V + LT+TRA + ++PI+ L++ + + Sbjct: 189 ALSAQALLKLDSTYKYYLYLGHFLLVTVAILLTETRAAIFVYPIVGATILLSEVRHNKRL 248 Query: 240 FTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIF 299 F + + A L + +F + I R N+ ND++SY NS TS+GAR+AMY+ G+ Sbjct: 249 FIKAFIGSAATLLLCLFLFQETIHQRVNDLFNDVHSYNMNNSKTSVGARIAMYQSGVEAG 308 Query: 300 IKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFL 359 + +SAE R + + L GA+E+ NVHLHNE+++A SLKGL G + L Sbjct: 309 EDA-LLGQSAEQRTARIITQAEQKPSLAGAVEYLNVHLHNEVVDAFSLKGLPGAILLILL 367 Query: 360 YFSLFYIA-YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVL 407 Y SLFY + + R+ L ++ GLSDVI+++R + I + L Sbjct: 368 YASLFYFSFFVLRSHLSAALLFSLLMYGLSDVILYSRDMLIAWLMTFCL 416 >UniRef50_Q4QTN0 WaaL n=1 Tax=Klebsiella pneumoniae RepID=Q4QTN0_KLEPN Length = 416 Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats. Identities = 122/408 (29%), Positives = 204/408 (50%), Gaps = 3/408 (0%) Query: 7 LHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQEN 66 +H + LK ++ + +L F+ ++ + KIY + + +L R Sbjct: 1 MHRVLNTRLKIKNMVLNLAGLLYLFTFMLFYAAPVEMRKIYYLAGYLTFFVALLGCRSLT 60 Query: 67 YNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTS 126 N + + L GL L WY A +S + + Y SY T K+ + + IVFL Sbjct: 61 SWKNNRDIAGATALFGLTLLGWY-ALNFTHSEYWSIYDSYKETGKVLLITALIVFLVSNL 119 Query: 127 QLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA 186 + E + L YA+Y E+ R+ + AT AY + IV A Sbjct: 120 RFSFPAERFSWLLIVAGLATNAYAIYQGLEIESVRLQIELDRATVIAYIFTMTNIVMLAA 179 Query: 187 ILYTKKNHP-FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIV 245 IL K + FLFLL + + +A T+TRA LL FP++ + LI + K+ Sbjct: 180 ILELKSQYRYFLFLLAALSGFTAIAYTETRAALLTFPVLIILLLIVHPRVRKKQLLKLGT 239 Query: 246 LLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFS 305 I +LA + I F++ + +RY ND + Y + NSV+S+G+RLAM++ GL + +PF Sbjct: 240 AFIVMLALLAIAFHQKLTDRYQGLRNDASQYQDNNSVSSIGSRLAMFQSGLQAALDAPF- 298 Query: 306 FRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY 365 SAE R +++ V + +L GAL++ +VH+HNE+IE SL+G+ G+ + + Y +L Sbjct: 299 GESAERRNDNIKRQVEKKPKLTGALDYMDVHMHNELIENFSLRGVGGVITLIIFYATLLI 358 Query: 366 IAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 A++K + +LTL ++ GLSDVI + + II +A++L ++ Sbjct: 359 NAWRKCNVMQGMLTLSVIIYGLSDVIFFGKEAVIIFSTALILSILYQK 406 >UniRef50_D0KD50 O-antigen polymerase n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KD50_PECWW Length = 410 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 127/397 (31%), Positives = 203/397 (51%), Gaps = 13/397 (3%) Query: 28 LCFFSMIIAFVDNTFSIK----IYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 L + S+II+ + F +K I+N I+ + L+L R+ +N+++PLS+F + + Sbjct: 16 LIYTSLIISLIAMIFDVKLASKIFNTIGIISTILLLLNRRR--IKKENILIPLSMFFLCV 73 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKK-ESVLYTLYSL 142 +LIW +K S YHSY N KI GS + +T K + L +Y++ Sbjct: 74 TNLIWEQIYKNGESEIIGLYHSYHNVMKILFLGSSLTLFVMTFSSKHTLSKKALNIIYTI 133 Query: 143 SFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAIL-YTKKNHPFLFLLN 201 F + Y + R S AT +AY IGI++ IL T+KN+ + +N Sbjct: 134 PFFLLLYYLLSEPEI---RFSISDRIATSSAYMISFIGILTSQYILLKTEKNNLLFYFIN 190 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 ++ LT TRA +L +P + LI K K I L I + ++ K Sbjct: 191 HITFFIIILLTGTRAAILAYPFLSAIVLIPVILKDKKINLKLIALFIMVNIICLVACQKT 250 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 I +R ++D+N Y +NS +S+GAR+A+Y GL FI +P +SAESR + Sbjct: 251 IISRSENLISDINMYNQSNSESSVGARIAVYRSGLTSFIHAPM-GQSAESRQLDIQKQAE 309 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA-YKKRALGLLILTL 380 E+ L GA + +HLHNE+IE+ SLKG++G + LFLY SL Y + + + L+ LTL Sbjct: 310 ENPSLSGATLLTGIHLHNELIESISLKGIIGGVALLFLYASLVYFSLFTLKDYALISLTL 369 Query: 381 GIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 ++ GLSDVI + ++ + + L +++ RNN Sbjct: 370 SLIIYGLSDVIFYGKNTTTVWVVTYCLSILLVKRNNN 406 >UniRef50_Q9ZIS3 Lipid A-core:surface polymer ligase WaaL n=3 Tax=Enterobacteriaceae RepID=Q9ZIS3_ECOLX Length = 417 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 121/402 (30%), Positives = 194/402 (48%), Gaps = 14/402 (3%) Query: 26 YILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLD 85 ++L ++ +D + KI N T L LI+ ++ NYN +IL L + L+G ++ Sbjct: 17 FLLYLIGLLFVPIDLNITTKIINATGAFSLFLLIVN-KKHNYNKNVIILILGLLLLGAMN 75 Query: 86 LIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFL 145 LIWY +K ++ +R Y YL + K+ +F S + FL L+ + E + + L + Sbjct: 76 LIWYEFYKTEDVVYRNAYRGYLESGKLLVFSS-LTFLLLSKNKFRQNEKLHFISAILVQI 134 Query: 146 IAGY-AMYINSIHENDRISFG--------VGTATGAAYSTMLIGIVSGVAILYTKKNHP- 195 I A Y DRI +G AT AAY + S + + K + Sbjct: 135 IMLCRAYYQGIYLHADRIPLSAMNGNIGQMGAATIAAYVITFTTLYSSIVFIKMKSKYKW 194 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 FLF N + +T TRA + FP++ + L + + + +L + Sbjct: 195 FLFYANFALSFAAVMMTGTRAAIFTFPLMIMVILFLQHRDQKVFLFKGLSGVFILLLACG 254 Query: 256 IIFNKPIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 +IFNK I R N D+ SY T NS +S+GAR AM G+ F+++S E RAE Sbjct: 255 LIFNKEIDRRINSLKADVISYATKNNSQSSVGARFAMVNAGIK-GSPDGFNWQSLEQRAE 313 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG 374 + L AE+N GAL F +VH+HNEI+E+ S KG +G+ + Y ++ Y +++ Sbjct: 314 KIKALSAENNIYSGALLFLDVHMHNEIVESLSTKGKIGLLVLIMFYVAMIYYCIREKKYI 373 Query: 375 LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 LL+ I+ G+SDVI A+ IP I + L + ++N Sbjct: 374 LLVFPASIMLFGISDVITHAKPIPASWIVCLFLSISFLSKNE 415 >UniRef50_B2VF67 Lipid A core, surface polymer ligase WaaL n=5 Tax=Enterobacteriaceae RepID=B2VF67_ERWT9 Length = 414 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 98/401 (24%), Positives = 193/401 (48%), Gaps = 6/401 (1%) Query: 20 ILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF 79 + + Y C + F ++ + + + ++++L R + N I+ L Sbjct: 10 VFSYLIYTCCAIAFATVPFGLKFGKDLFYVASYISFIAIVLNIRYYTQDKLNFIVSLLFL 69 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 GL + W AFK P+ Y SY++TA++ I S I + L ++ +K +++ ++ Sbjct: 70 AFGLGTIFWLVAFKQPG-PYIDVYRSYMSTARLVIAMSVISLVALNERIAIQKITLVVSI 128 Query: 140 YSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFL 199 ++ L+ YA+Y RI T AY I +V +I+ K + +F Sbjct: 129 -AVGLLVNAYALYQGLWLLQARIELNFDRTTIVAYLLTAISLVMMQSIMLLKVRYRLIFY 187 Query: 200 LNSCAVLYV-LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI-AILASIVII 257 + + + Y + LT TRA ++ +P + V +I N P + +I+LL+ +LAS ++ Sbjct: 188 IAAFILSYSTIILTGTRAAMIAYPALIVLTVIVTKNIIPIRHKVAIILLVPVLLASTGLL 247 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 F I++R ++ ++ + + S S+ +R+ M + + K+P +S E RA Sbjct: 248 FKDMIKSRIDDFERNVAAINDTRSENSVFSRVWMQIVAIRTGNKAPL-GQSVEQRANEAM 306 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK-RALGLL 376 ++ + +L A + VH+HNE++E SLKG G+ L Y SL +++++ R L Sbjct: 307 EVIKDDPQLYNARRYLTVHMHNEVLETWSLKGAWGVTLLLSFYGSLILLSFRQSRNSMLF 366 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 +T +V GLSDVI ++ + + AI+ ++ + ++ Sbjct: 367 GVTSALVIYGLSDVIFFSTEATAVFLLAIIASILSAKKPHS 407 >UniRef50_B6XJV7 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XJV7_9ENTR Length = 400 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 110/391 (28%), Positives = 197/391 (50%), Gaps = 15/391 (3%) Query: 28 LCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLI 87 LCF ++++ + KI+N I+ +L+ + + N +I+ + +FLIG+ LI Sbjct: 4 LCFIAILLLPFKPDITSKIFNFAGILSVLTFLSSPKVYLKNK-IVIVAIPLFLIGITHLI 62 Query: 88 WYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFL---TLTSQLKSKKESVLYTLYSLSF 144 W +K +S +R YH Y KI +FGSFI+ + L + L SK + T+ +S Sbjct: 63 WVELYKTSDSIYRNVYHGYFQMGKIALFGSFILLITHNALKNILISKLHLITATISQISI 122 Query: 145 LIAGYAMYINSIHENDRISFGV---GTATGAAYSTMLIGIVSGVAIL-YTKKNHPFLFLL 200 L GY +Y R+ ATGAAY+ + + + + L + + +L+ L Sbjct: 123 L--GYTVYQEFYLHIPRVELAFHNASNATGAAYAMIFLSLYAQFIFLSHGSRIKYYLYSL 180 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 + + + LT+TRA +LL+P+I + Y+ ++ ++ I I IF++ Sbjct: 181 SILITFFCVVLTETRAGILLYPVISLCIFFLYFRQNKNLKLKFVLFPIIAALIICAIFSE 240 Query: 261 PIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 I R A N++ +Y N ++ TS+G RL+M + G + + F ++SAE R + L Sbjct: 241 TIIQRMQSASNEIIAYIKNDSTSTSVGDRLSMIQTGF--YASNGFLWQSAEERNSKIIEL 298 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM-GIFSTLFLYFSLFYIAYKK-RALGLLI 377 R GA+E HLHN+++E S KG + G+ L Y ++F YK+ + +L Sbjct: 299 AKNDKRFAGAIEHMQAHLHNDLMEELSTKGWINGVLLILLFYVAIFAYGYKQAKNPFILG 358 Query: 378 LTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 T ++G+GLSD +I + + + + ++L+ Sbjct: 359 FTFVLIGLGLSDTLIISTQVSLSWVLVLILM 389 >UniRef50_Q7NZV1 Probable O-antigen ligase; lipopolysaccharide core biosynthesis n=1 Tax=Chromobacterium violaceum RepID=Q7NZV1_CHRVO Length = 429 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 15/323 (4%) Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 +WY D F + +Y + KI++ ++ L S + + TL +S Sbjct: 90 LWYFPAPTDAGLFPVAF-AYQLSNKIWLSALPLLLFPLWSPFRERLSPAGATLALVSASA 148 Query: 147 AGYAMYINSIHENDRISFGVGT--ATGAAYSTMLIGIVSGVAILYTKK---NHPFLFLLN 201 + + + ++ + G+G+ ATGAAY I + + + L LL Sbjct: 149 LLSMITLKAWYDAHGVRVGLGSLYATGAAYLLSAIHFFALLLFHPFRLKKWQWLGLCLLI 208 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 + + + T TRA LL++ + AL+ + T +I L+++ + + + Sbjct: 209 ALQFM-SIVATGTRAALLVYLFVLGCALLWRFGLHQSWRTYAIAALLSV--ATLWLSWAA 265 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 + +R +A DL +Y+ N+ TSLG R ++++ G++ + P+ +S ++R + LV Sbjct: 266 VGSRVKQAQADLIAYSQGNADTSLGIRFSLWDAGVHAVREQPW-GQSIQARDVLFHQLVK 324 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK----RALGLLI 377 + + AL +VHLHNE +E SL+GL G S L +K+ R L Sbjct: 325 DGALNKAALIMRDVHLHNEWLEILSLQGLPGALSWLIFLLGFGVYGWKRGGFFRRFALFY 384 Query: 378 LTLGIVGIGLSDVIIWARSIPII 400 + +V GLSDV++ + I + Sbjct: 385 IGFWLV-FGLSDVLLLSPQIAMF 406 >UniRef50_C6P739 O-antigen polymerase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P739_9PROT Length = 425 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 65/335 (19%), Positives = 132/335 (39%), Gaps = 21/335 (6%) Query: 101 ATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEND 160 T H Y ++ ++ + VFL L +L+ VL + L+ +I M N + Sbjct: 89 YTAHPYDAASRYWL--AIPVFLLL-QRLRPAVFVVLQVAFPLAAIIGF--MMSNDLGAGS 143 Query: 161 RISFGVGTATGAAYSTM--LIGIVSGVAILYTKKNHPFLFLLNSCA---VLYVLALTQTR 215 G+GT + + + G++S +I + +++ L LL L + +R Sbjct: 144 ENRSGIGTLDLIHFGDLELIFGVLSLFSINWLGRDNKLLRLLKVTGFMLGLLASFESGSR 203 Query: 216 ATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNS 275 P+ + ++ K ++ ++ + + + V + + Q+R NE +ND+ + Sbjct: 204 GGWFAIPVFILIYFYFRTSRVSLKMAAASLIATSFVIAFVYLASGTFQHRVNELINDIAT 263 Query: 276 YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV 335 + N TS G R +Y+ +IF P E A M ++ A E Sbjct: 264 FEQGNRDTSTGVRWQLYKAAADIFAHHPIFGVGPEGFALEMQPMLDAGKITPLAAELGRG 323 Query: 336 HLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGL----------LILTLGIVGI 385 +HN+I+ + G+ G+ + L YF F + ++ L + GI+ Sbjct: 324 EVHNDILSKAAGMGIFGLAALLASYFVPFGLFWRATKSTLREVRRAGILGIAFVSGILVF 383 Query: 386 GLS-DVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 G++ + + + + VLL N + + Sbjct: 384 GVTVEFLNLTMATAFYGFTVAVLLAACYNVHYGVQ 418 >UniRef50_C9Y384 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y384_CROTZ Length = 219 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 2/212 (0%) Query: 206 LYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNR 265 +L T TRA ++ +P+I + L K I+ + L + + + I R Sbjct: 3 FLMLVATGTRAAIIAYPLIFLVLLAIKLYKEKHIPWKGIIAFVLALIVGIFMMKEDIAKR 62 Query: 266 YNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNR 325 YN+ +D+ +Y ++TS+GARLAM++ GL K+ F ++S + R E + V + Sbjct: 63 YNDFNSDIAAYDRNITLTSVGARLAMWQTGLEA-AKNNFLWQSTDQRNEIIAATVKKEPG 121 Query: 326 LRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK-RALGLLILTLGIVG 384 LRGAL F HLHNE++E SLKG G+ +LF A++K ++ L I+ Sbjct: 122 LRGALLFMKGHLHNEVVETLSLKGPSGLLLYFAFIVALFCYAFRKLNSIILCAFLASIIM 181 Query: 385 IGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 G+S V+ ++++ PI + +++ +V +N Sbjct: 182 FGISGVMFYSKTTPIAWMLTLIMSIVFLEQNR 213 >UniRef50_B5SFB1 Lipopolysaccharide o-antigen ligase protein n=4 Tax=Ralstonia solanacearum RepID=B5SFB1_RALSO Length = 435 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 108/309 (34%), Gaps = 13/309 (4%) Query: 114 IFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAA 173 + +FL L + + G ++ R+ Sbjct: 107 FLAAVPLFLLLRRAPLRWLRWADGSFAVAALAGLGVCLWAARDWGEGRMGSTFLNPIHFG 166 Query: 174 YSTMLIGIVSGVAILYTKKNHPFLFLLNS---CAVLYVLALTQTRATLLLFPIICVAALI 230 +++G++S ++I + +K+ + LL A L LT +R + P I + +I Sbjct: 167 DIALVLGVLSALSINWWRKDPLAVRLLKIGGLLAGLVASLLTGSRGGWVALPFILMLVVI 226 Query: 231 AYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLA 290 P ++ + + + + I + I+ R + DL Y TS+G RL Sbjct: 227 MRGRDKPARWRVLVPAVAVLGVVALYIVSGTIRERIHMVWADLAQYGQGQKDTSVGIRLQ 286 Query: 291 MYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGL 350 +Y+ L + + P A+S+ LV A + HN+++ + GL Sbjct: 287 IYQAALMLIPQHPIFGLGPGGFADSLQALVDAGRMTATAAQLGRGEAHNQLLAYTANFGL 346 Query: 351 MGIFSTLFLYFSLFYIAYK----------KRALGLLILTLGIVGIGLSDVIIWARSIPII 400 +G + + ++ + ++ + AL + L GL+ I + Sbjct: 347 VGGLAIVAIHLVPGLLCWRCLKAPAAPMRRAALMGAVFALAFFVFGLTVEIFTLKMTASF 406 Query: 401 IISAIVLLL 409 + I L Sbjct: 407 YAAVIACLA 415 >UniRef50_Q0K7R4 Membrane spanning protein involved in lipopolysaccharide biosynthesis n=2 Tax=Cupriavidus RepID=Q0K7R4_RALEH Length = 429 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 79/421 (18%), Positives = 168/421 (39%), Gaps = 24/421 (5%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 ML +L + Y + ++ L + F +++ FV T S Y + ++L+ Sbjct: 1 MLLMTRLQRSQSYGVDKALYLAACAVLAAFPALM--FVKPTVSNLCYGLLLGWSAITLVA 58 Query: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 GR+ L+ F++ + L + S + SYL F FI Sbjct: 59 GGREGRTECGGLLRRYWFFMLAMAALPLAVLLQQLLSGAEEPHVSYL----YLRFALFIP 114 Query: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 + +L + + + L++ ++ + + G + +ML+G Sbjct: 115 LVFGMVRLGRGGMRSVQWGFVVCALLSAAWIH-EATAAGRPVHVGSSNIIPLSNLSMLMG 173 Query: 181 IVSGVAILYTKKNHPF---LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP 237 I++ ++I + + L LL A LY ++ TR L P++ AL A + + Sbjct: 174 ILALISIGWDRPRDYLQSGLKLLAGFAGLYASYMSGTRGGWLAIPVLAFIALAASHRLTR 233 Query: 238 KKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGL 296 +++V L ++ + + + +Q R + +++++ + + T G RL ++ L Sbjct: 234 MHKAAAMVGLAGLM-GLAWLGSARVQQRTADVVSEVSQFAQHVTPDTPTGIRLQLWRASL 292 Query: 297 NIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFST 356 + P++ E+ ++ L A+H L + H HNE++ A + G+ G+ + Sbjct: 293 ELIQAHPWTGVGPENFERTLQTLEAQHVITP--LAATMPHSHNELLHATATLGIPGLLAI 350 Query: 357 LFLY-----FSLFYIAYKKR-----ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIV 406 L LY F L ++ R + L L G + GL++V+ + + Sbjct: 351 LALYLVPAAFFLRHLGNADRGTQVASAMGLALCCGFMVFGLTEVMFATTLVNAFYSLIMA 410 Query: 407 L 407 + Sbjct: 411 V 411 >UniRef50_B2U905 O-antigen polymerase n=2 Tax=Ralstonia pickettii RepID=B2U905_RALPJ Length = 426 Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 128/303 (42%), Gaps = 16/303 (5%) Query: 127 QLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA 186 QL+ K+ + L + Y+ + A ++L+ + + ++ Sbjct: 118 QLRPKQLESVQWGCVAGALASAVWAYLELRAGRVGMVGAFSNAIPFGNLSLLMALFALMS 177 Query: 187 ILYTKKN---HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSS 243 I +T+ + L LL CA LY L+Q R + P++ + A+ + S KK ++ Sbjct: 178 IGWTEDDGWALIALRLLAGCAGLYASYLSQARGGWIAIPVLLLIAVATLRHVSWKKRLTA 237 Query: 244 IVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSP 303 ++L L ++ + + ++ R+++A+ D+++Y + TS+G R +++ + + P Sbjct: 238 LLLFFVFLIAV-CVSSSVVRTRFDQAMEDIHAYQAGQTNTSVGIRFQLWKAATLMLTRHP 296 Query: 304 FSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSL 363 + ++ + AE + A F H HNE + G+ G++GI + L LY Sbjct: 297 LAGVGRGQFGPALKAIHAEGLITQEATAF--EHAHNEFLYNGATLGVLGIGALLALYLVP 354 Query: 364 FYIAYKK--------RALGLLILTL--GIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 + R G + LTL G + GL++V++ + + + + Sbjct: 355 AAYFLRAALCDDRVLRTTGAMGLTLCVGFLLFGLTEVMLIIAQTVVFYSVMVAVFTAHIH 414 Query: 414 RNN 416 R Sbjct: 415 RRR 417 >UniRef50_B6A4C0 O-antigen polymerase n=11 Tax=Rhizobium RepID=B6A4C0_RHILW Length = 424 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 116/264 (43%), Gaps = 13/264 (4%) Query: 118 FIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTM 177 + F ++ L ++S L L L AG M + + +I F + A + Sbjct: 106 LLPFFSVWLLLPRMRQSPDGRLVPLFILGAGIGMIVTFLFSLLQIMFLMERAEAGTSNAA 165 Query: 178 LIGIVS----GVAILY---TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALI 230 L+G++ G+A+L K + +L A L + L+ TR+ L+ P+ V L Sbjct: 166 LLGVIGILFGGIALLNVQSPKSVEQRIAILGYAAGLGCVLLSGTRSAWLVIPVHIVIFLW 225 Query: 231 AYYNKSPKKFTSSIVLLIAIL-ASIVIIFNKPIQNRYNEALNDLNSYTNANSV-TSLGAR 288 + S S+ + ++L A ++ + + I +R ++ S ++ TSL AR Sbjct: 226 YFRKHSFHLSLRSLAITGSLLFAGLIALGSGQILHRIEALQENMASLERSDGEVTSLSAR 285 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLK 348 A+Y+ ++ K P + ++R S +L + LR L +S H+HN + AG Sbjct: 286 FALYKGAISAISKDPLTGYGPQNRMAS--VLAELPDSLRPQLTYS--HVHNGFLTAGIDA 341 Query: 349 GLMGIFSTLFLYFSLFYIAYKKRA 372 G+ GI + + + A++K A Sbjct: 342 GIFGIAALSLMLATPVIGAWRKEA 365 >UniRef50_B8K678 Putative O-antigen ligase n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K678_VIBPA Length = 392 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 61/313 (19%), Positives = 131/313 (41%), Gaps = 13/313 (4%) Query: 111 KIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTAT 170 ++ I S +VFL + +K K + S + Y ++ + + DRI + V Sbjct: 85 RVLIATSLLVFLPQDNVVKFVKTHLANLTPLASLISIAYVIHQSYYLQLDRIEWSVNPIP 144 Query: 171 GAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYV----LALTQTRATLLLF--PII 224 T ++ ++ ++ Y + F + + L++ + +++TR TL+ F ++ Sbjct: 145 ----YTTMVSAIAIISFYYMVSPYNFRIKIANTVGLFLSVTGILISETRGTLVAFIAALL 200 Query: 225 CVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTS 284 ++ ++ K + + ++ + I+ RY + ++ N N TS Sbjct: 201 ILSLFRLDFSTLKHKGIKYFTIASIAILTLFFVNKDTIKPRYERTVFEVQQILNGNYSTS 260 Query: 285 LGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEA 344 +G RL M++ GL + K P +S + L E+ + A+++ H HN+ I + Sbjct: 261 IGLRLHMWQAGLEL-AKHPTLIGLGDSHIDEKKKLAEENLIHQSAVKWR--HYHNDYITS 317 Query: 345 GSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISA 404 +G++G L + FY + R+ I +L V + S +I Sbjct: 318 WVKRGVVGFVFLLVMLSFPFYYFIRYRSEETTIASLVGVIYVVGSFTDIPLSQANSLILY 377 Query: 405 IVLLLVINNRNNT 417 I+L++V+ + T Sbjct: 378 IILMIVLCSPKRT 390 >UniRef50_C8Q870 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q870_9ENTR Length = 422 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 83/399 (20%), Positives = 171/399 (42%), Gaps = 24/399 (6%) Query: 28 LCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILR----GRQENYNIKNLILPLSIFLIGL 83 L SM + FS KI+ I + + ++ + + + + +L ++IF +GL Sbjct: 25 LLSLSMPLTLFSYGFSQKIFYIASYLSVVLFFVTLANKHARTSIDKYTWLLFIAIFALGL 84 Query: 84 LDLIWY----SAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTL--TSQLKSKKESVLY 137 + L W + + P +YL K + G+FI+ + ++ Sbjct: 85 VRLGWALDIRANYTDFTGPTANIISNYLLGGKRLLLGAFIISVISIHHQKITPAMVGCSK 144 Query: 138 TLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL 197 L L + DRI A+ ++Y + + + + K+ L Sbjct: 145 IFLWLGALATLGFGVHEYLLTGDRIKLTADAASSSSYMVLF---LYCAYLWLSAKDVSRL 201 Query: 198 F----LLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 + L + ++ LT TR +LL F I + + +Y + ++ IL + Sbjct: 202 WITIDLAFVAIIFSLVILTGTRVSLLAFLFITLCQISRFYGLLTVLKSRRNRVITLILVA 261 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 +++ R+ +A N++ +Y+N +S TS+GAR+A+++ GL+ + F S + R Sbjct: 262 GLVMSTG---ERWMQAFNNIENYSN-DSSTSVGARVAIWDSGLHFLPEH-LGFSSPDVRT 316 Query: 314 ESMNLLVAE-HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA 372 + +A H ++HNE +E +L+G++G+ +FLY + F+I K+ A Sbjct: 317 VTARAYIAAFHPGNTEGYTNVKYNMHNEFLEVVTLEGIVGLVCLVFLYVATFWIWSKRSA 376 Query: 373 L-GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 L G+ + + +GL+D ++ + + A+ L + Sbjct: 377 LQGISLPVAALFIMGLTDSVLIYPQTTTLFVIALALCAI 415 >UniRef50_A9IRJ0 Membrane protein resembling polysaccharide polymerases n=4 Tax=Bordetella RepID=A9IRJ0_BORPD Length = 419 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 136/322 (42%), Gaps = 18/322 (5%) Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATG 171 + I ++++ L+ + S+L Y+ S ++ + + G A Sbjct: 95 LAIPVAWLLLRVPRRWLQQVQWSLLAGAYAGSVMLFVIMLSPDLGRGAVSEYGGRYNAVA 154 Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFL----FLLNSCAVLYVLALTQTRATLLLFPIICVA 227 A T+ G+ S + + L + L+ L+QTR+ L + V Sbjct: 155 FADLTLFFGLASCLTLPGRLSRFSRLEAVLKIFVVPLSLWAAWLSQTRSCWALLVVFGVV 214 Query: 228 ALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGA 287 L+A + S + T+ + L A + + + ++R+ E +DL Y + + TS+G Sbjct: 215 LLLANRHWSLRAKTAFVAGLSAFVVAGAVFAWHAKESRFAEVRHDLTRYEHQDRDTSVGI 274 Query: 288 RLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG-ALEFSNVHLHNEIIEAGS 346 RL +++ +F + P + A + + L + + A +F HN+ + A + Sbjct: 275 RLQLWQASWLMFKEKPLTGVGAPNFRAELARLHDQGVVTKLVATKFGEP--HNDFLGALA 332 Query: 347 LKGLMGIFSTLFLYFSLFYIAYKK----------RALGLLILTLGIVGIGLSDVIIWA-R 395 + GL G+ S L LYF I +++ A L+ TLG L++++ + R Sbjct: 333 MYGLPGLLSILALYFIPAAIFFRRLGSSDPVTHMGAKLGLLFTLGYATFSLTEMMFRSMR 392 Query: 396 SIPIIIISAIVLLLVINNRNNT 417 S+PI ++ +VL + + R + Sbjct: 393 SVPIYAVTVVVLFALSSERARS 414 >UniRef50_C9P0H7 O-antigen ligase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9P0H7_9VIBR Length = 389 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 120/318 (37%), Gaps = 22/318 (6%) Query: 105 SYLNTAKIF------IFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGY---AMYINS 155 SY + ++ + + + L S + K S + ++ + A++ + Sbjct: 74 SYFSIMHVWRGDNFGLPRTLLTCLVYLSVVPWSKFSNSWVYNTIILSASVCGLNAIFEHY 133 Query: 156 IHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTR 215 R+ A Y + + + Y + L + L+ L LT +R Sbjct: 134 YLNIARVGIATNPIPYALYCSFVSLSSLALTKHYESRFIQGLCITGFLLSLWALILTDSR 193 Query: 216 ATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNS 275 + +PI + + +N + L+ L++I + F I R + + + NS Sbjct: 194 GVWVAYPIAMMLVIYRSFNNLSLVKLGTFTLIG--LSAIYLSFKPMIDERVDRTVAEFNS 251 Query: 276 YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV 335 + N TS GARL ++ G++++ + P +L ++ + + Sbjct: 252 ISKGNYETSFGARLDLWTFGVDVWKEQPMVGEG-------DIMLEEGIRKVPNRKAYRQL 304 Query: 336 HLHNEIIEAGSLKGLMGIFSTLFLYF---SLFYIAYKKRALGLLILTLGIVGIGLSDVII 392 HLHN+ I+ + G +G F + +F L + R + +++ L + GLSDV Sbjct: 305 HLHNQYIDTLARYGSVGFFIMMVWFFYPVRLNKARERDRVITQVLVMLVFIA-GLSDVPF 363 Query: 393 WARSIPIIIISAIVLLLV 410 + + + L + Sbjct: 364 HHTHVVYLFTLVVGLFSL 381 >UniRef50_B7X132 O-antigen polymerase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X132_COMTE Length = 434 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 117/272 (43%), Gaps = 17/272 (6%) Query: 109 TAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGT 168 AK + + +L S+ + ++++ L A+Y + + R++ G Sbjct: 101 GAKYALAALSLWYL---SKSGVRLPAIVWGLALGCAGALAIAVYQAGVLKMPRVT-GFTN 156 Query: 169 ATGAAYSTMLIGI--VSGVAIL-YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIIC 225 A M +G +S + ++K L LL +C V + L+ +R + ++ P++ Sbjct: 157 AIQYGGIAMYLGFATLSLAVLGRWSKSRAAALGLLGACGV-FASFLSDSRGSWVVIPLLI 215 Query: 226 V-AALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY---TNANS 281 L+A+ N + + + ++ + + + + ++ R EA +++ Y + Sbjct: 216 AAIWLMAWLNGYKRLASLAAAAMLMLGLIVAVPAYQKLEQRSTEAAREVSQYLQDPQKYA 275 Query: 282 VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEI 341 VTS+G RL + + +++ + PFS + +V + +E+ H HNEI Sbjct: 276 VTSVGQRLEQWRLAIHLIEQRPFSGWGLAGYPAAKKQMVDQGLAHPSVMEYG--HAHNEI 333 Query: 342 IEAGSLKGLMGIFSTLFLY---FSLFYIAYKK 370 ++ +GL G+ L Y ++F+ ++ Sbjct: 334 LDMWVKRGLPGLILLLAFYAVPAAIFWPTPRR 365 >UniRef50_C5V1T7 O-antigen polymerase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1T7_9PROT Length = 414 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 62/325 (19%), Positives = 127/325 (39%), Gaps = 16/325 (4%) Query: 105 SYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISF 164 SY ++ F+F I F + K + L + A + R + Sbjct: 85 SYWDSPARFLFAVPIYFALKKQSM--KVFELFQFGLPLGAIAALLIQHQEVGVFGTRATN 142 Query: 165 GVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC---AVLYVLALTQTRATLLLF 221 +++GI+S +I + + + + +L A +Y L+ TR + Sbjct: 143 TFLNPIHFGDLALMLGILSACSINWFRLDSRLVVMLKVIGLIAGMYASILSGTRGGWVAI 202 Query: 222 PIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANS 281 P+I + L+ + KK ++ + A+LA F PIQ R +++ ++ S + N Sbjct: 203 PVILLVCLVVWKVYDVKKLAGGLLAVAAMLAVSYFAFT-PIQQRVSDSYVEIRSIASGNL 261 Query: 282 VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEI 341 TS G RL +++ IF+ +P + S ++ L A + +H++I Sbjct: 262 ETSTGFRLQIWKGASQIFLANPIAGVSPSGFDNAILSLGKAGVISPMAADLGVNEVHSQI 321 Query: 342 IEAGSLKGLMGIFSTLFLYFS---LFYIAYKKRA-------LGLLILTLGIVGIGLSDVI 391 + + G+ G+ + ++ F + + R L + L +G + GL+ + Sbjct: 322 FSSAARLGIFGLIAYFLVHLVPLKFFVNSMRSRNNIIQKAGLMGMSLVVGFIVFGLTVEM 381 Query: 392 IWARSIPIIIISAIVLLLVINNRNN 416 + + V+LL N +N Sbjct: 382 YNLKMVATFYSLTGVVLLACCNNDN 406 >UniRef50_C6MBK9 O-antigen polymerase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBK9_9PROT Length = 396 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 60/313 (19%), Positives = 123/313 (39%), Gaps = 7/313 (2%) Query: 110 AKIFIFGSFIVFLTLTSQL-KSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISF-GVG 167 K + S +VF+ + + K + L L + +Y + I G+ Sbjct: 83 MKWVKYFSLLVFIPFYALIDKERLPWALGGLIVSYLCVLAVGVYQWFTIDAQGIPLLGMS 142 Query: 168 TATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVA 227 + +A + + SG+A + LF++ + +L+ + Q LL +I + Sbjct: 143 YLSFSAMLGIGAIVTSGMACMNPSVRLQILFVIATLVLLF-IQFHQNGRIFLLVTLISIL 201 Query: 228 ALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGA 287 + + + I++ + ++A + + Q R + +D+ N +SLG Sbjct: 202 LIAFLRYQIEMRKFLMILISVLVVAVVFAYSSPVFQARLIQIKSDIELLQQGNYSSSLGY 261 Query: 288 RLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNR--LRGALEFSN-VHLHNEIIEA 344 RLAM+++GL+ + P S + +A + + EF H HN+ IE Sbjct: 262 RLAMWDVGLHGIAERPLSGFGTGMPEKYFEKTIATYKDGLYKDLPEFQETAHYHNDWIEI 321 Query: 345 GSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIV-GIGLSDVIIWARSIPIIIIS 403 G G+ G+ FL +S + + L + + + GL+D I PI+++ Sbjct: 322 GMHIGVPGMLVLGFLLWSWYQAFNRNNLNLLGLGLISFIFLSGLTDTFIIFSRTPILLLI 381 Query: 404 AIVLLLVINNRNN 416 + + + R Sbjct: 382 ITAIAINWHKREQ 394 >UniRef50_Q2YBZ5 O-antigen polymerase n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YBZ5_NITMU Length = 431 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 73/400 (18%), Positives = 147/400 (36%), Gaps = 28/400 (7%) Query: 26 YILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQ---ENYNIKNLILPLSIFLIG 82 ++L FF + + + I + + ++ G + + ++ L + + Sbjct: 25 FVLLFFGIALWSKWLSLGTGIL-----LTFIWILDSGPRRLGQIIREPLVLGILLLCAVV 79 Query: 83 LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSK-KESVLYTLYS 141 + L+W + Y +L FI FL+L ++ + + L T Y Sbjct: 80 AVGLLWAD-YPEAGRMKWRRYFGFL---------VFIPFLSLLNRHRLPWAIAGLLTGYI 129 Query: 142 LSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLN 201 + L Y ++ + ++ + +++ + AI K + L Sbjct: 130 IVLLSGVYQWAVSGVQGIPPLNISYLVFSSLLGIGVILLLYLATAIGEIK--WKCVLGLG 187 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 S +L + R LL + + Y K+ +K I+ + I+ ++++ + Sbjct: 188 SLFLLLIQFGQYGRGPLLATLLAVFLMVFLTY-KTERKALLGIIASLTIVVAVLVYGSNS 246 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 Q R + + TSLG RLAM+++GL+ ++ PF VA Sbjct: 247 FQARLEQVEVEAKLSQQGKYDTSLGYRLAMWDVGLHGILEHPFFGHGTGMPESYFEKTVA 306 Query: 322 EHN--RLRGALEFSNV-HLHNEIIEAGSLKGLMGIFSTLFLYFSLF--YIAYKKRALGLL 376 + R ++ H HN+ IE G G +GI + F +S F A++ LG Sbjct: 307 TYKGGIYRDLPQYVGASHYHNDWIEIGMHTGALGILAYGFFLWSWFQTLRAHRLPVLGAA 366 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 ++ I GL+D IP ++ + + N Sbjct: 367 LVFF-IFLSGLTDTFALYSKIPTFLVVITAIAIAWQKEGN 405 >UniRef50_Q1LJU1 O-antigen polymerase n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LJU1_RALME Length = 413 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 10/250 (4%) Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC 203 FL Y DR A A + +V ++ H ++ N Sbjct: 122 FLALLIVGYQKFALNIDR-PSAWIQAIAFANMIAALALVGFARPGDSRGTHMEAWV-NLL 179 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILA-SIVIIFNKPI 262 +L L TR ++ + V L+ Y + + V +A LA ++ + P+ Sbjct: 180 LGTMILMLNGTRGAVVAMLVTSVPMLMIRYRRFSVRMLIVAVCAVATLAIGAYMVPDSPV 239 Query: 263 QNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE 322 R ++A++++ Y N TS+G RL ++ IGL F + P++ A ++ Sbjct: 240 SKRVDDAVSEIQMYRQGNIETSVGVRLKIWHIGLQYFSEHPWTGVGVGQFARILHASEFC 299 Query: 323 HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF---SLFYIAYKKRALG--LLI 377 H A H HN+I+EA S G+ G+ L L+ LF A + Sbjct: 300 HETKSLAC--VLEHAHNDIVEAASTTGIPGLMVMLGLFLVPAVLFARALRAARSLGNPQG 357 Query: 378 LTLGIVGIGL 387 ++LG G+G+ Sbjct: 358 VSLGGAGLGV 367 >UniRef50_D1T571 O-antigen polymerase n=3 Tax=Burkholderia RepID=D1T571_9BURK Length = 433 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 90/253 (35%), Gaps = 18/253 (7%) Query: 154 NSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL---FLLNSCAVLYVLA 210 + +R++ A + +L+ +S + + + +L + Y Sbjct: 138 GGWTDANRLNNSYTNAIPFGDTALLLAFLSVFTLGWDNPRDWRVLVPRVLALVSGGYASF 197 Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEAL 270 L+ TR L P+ V L Y+ +K + L+ ++ + ++ + +Q R+ E Sbjct: 198 LSGTRGGWLAVPVF-VVLLGMQYHWFTRKKRLLVATLVIVIGAGGVLSTERVQKRFAEVP 256 Query: 271 NDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGAL 330 ND++ T+ G RL ++ I + P + + Sbjct: 257 NDVSMMQKGEDFTATGLRLQLWNASRIIVERHPVWGVGKGHLVNELGAMAKRGEV---KA 313 Query: 331 EFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR----------ALGLLILTL 380 E N H++ + G +G+ L Y+ + ++ R + L + Sbjct: 314 EIVNERAHSDFFSTLAEMGAVGVICLLLFYYGMTVYFWRHRHASDPAIRAASYSGLAVAS 373 Query: 381 GIVGIGLS-DVII 392 V GL+ DV++ Sbjct: 374 STVIFGLTIDVLV 386 >UniRef50_A3UQU5 RfaL protein n=1 Tax=Vibrio splendidus 12B01 RepID=A3UQU5_VIBSP Length = 411 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 10/258 (3%) Query: 118 FIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATG-AAYST 176 F V + L ++ L IAG + + +R + G A Sbjct: 93 FAVVVMLYIANSPPSIKFIFYSICLGASIAGTLAIYHYVTTGERAFYENGYMVIQAGGIA 152 Query: 177 MLIGIVSGVAILYTKKNHPFLFL----LNSCAVLYVLALTQTRATLLLFPIICVAALIAY 232 + ++S VA++Y K+ L + ++ L L +R +L P I + + Y Sbjct: 153 SSLALLSIVALIYAKQTKELLLITISSVSIILGLSATLLAGSRGAWILPPFIII--YLFY 210 Query: 233 YNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMY 292 K F S ++ +++I A+I+ I + I+ R + L+D++ Y N+ S TS GARL M+ Sbjct: 211 IYKDSFSFRSKVIAILSITATIIFI-SPTIKPRIDAMLSDIHRYQNSYSKTSSGARLEMW 269 Query: 293 EIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMG 352 + + P + + + + + + L+ + HN+ E KGL+G Sbjct: 270 KSATYSALDKPIFGQGFDGVKRAKKAQIEKGLVDKQVLK--SKRAHNQFFEELQTKGLIG 327 Query: 353 IFSTLFLYFSLFYIAYKK 370 +F+ + Y+ +KK Sbjct: 328 LFTMFAFFGVPLYLLWKK 345 >UniRef50_Q474P4 O-antigen polymerase n=1 Tax=Ralstonia eutropha JMP134 RepID=Q474P4_RALEJ Length = 430 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 63/330 (19%), Positives = 124/330 (37%), Gaps = 20/330 (6%) Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR 161 Y ++ IF VF L + + ++ + + + A + + Sbjct: 97 AARDYDRALRLAIF--PFVFWILFFVPIRHLKLLQWSFLAAAVIAMAKAYIFTNGGDVRD 154 Query: 162 ISFGVGTATGAAYSTMLIGIVSGVAILY---TKKNHPFLFLLNSCAVLYVLALTQTRATL 218 + G + + +L G++ V+ + K + +L A LY LT TR + Sbjct: 155 GNIGFISIIAYSDIALLAGVLCVVSFGWNEGKLKLVLLVKILACVAGLYTSVLTATRGSW 214 Query: 219 LLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTN 278 L P+ + L + +K+ V ++ +++ N+ NR+ + +DL +Y++ Sbjct: 215 LAIPLFLIFFLFFARLEVRRKWL--WVASFVVVVGLMLTLNQNAANRFLDTQSDLAAYSH 272 Query: 279 ANS-VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHL 337 TS G RL ++ L + + P E+ S+ + + F H Sbjct: 273 GGGKSTSTGHRLQLWGAALTLIAREPVFGIGRENYDSSIKEMARKKEITGELTRF--AHS 330 Query: 338 HNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK----------RALGLLILTLGIVGIGL 387 HNEI+ + + G+ G+ S L LY Y ++ A L +G GL Sbjct: 331 HNEILFSTVVSGVFGLLSALALYLVPGYFFARELSNTAPDIRTAARMGCALVIGFFSFGL 390 Query: 388 SDVIIWARSIPIIIISAIVLLLVINNRNNT 417 +D++ + + I LV R+ Sbjct: 391 TDLMFFWPVLGGYYSIMIGAFLVFIIRSKA 420 >UniRef50_A5EUW2 O-antigen ligase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EUW2_DICNV Length = 401 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 99/264 (37%), Gaps = 11/264 (4%) Query: 164 FGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL-NSCAVLYVLALTQTRATLLLFP 222 G + +M+ + SG + Y K L+ + AL R + L+ P Sbjct: 132 IGYQHHIQFSGISMIFAVFSGFRLPYAKTRWQRFILIVALFCGVCAAALGGGRGSWLIVP 191 Query: 223 IICVAALIAYYNK-SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANS 281 I V I + + K LL++ +++ I + R +DL+ Y Sbjct: 192 PILVLFFIMMRKRVTLKNAALGFFLLLSFFSALYCIPQTGVAARVRGVFSDLDHYRQGTV 251 Query: 282 VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEI 341 TS G RL M+ ++ + P + L+A ++ F+ HLHN+ Sbjct: 252 ATSQGMRLEMWRCARLMWQEKPLMGWGSVGMQAEKARLIARNDCHFSIAPFN--HLHNDY 309 Query: 342 IEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGL------LILTLGIVGIGLSDVIIWAR 395 I+ G G++G F+ LF+Y ++ + A + + + + L++ + Sbjct: 310 IDIGVRYGIVGCFNFLFIYCGALFLYFVMLAQFPSIAWQGIAINCCFMVVSLTNA-FLSH 368 Query: 396 SIPIIIISAIVLLLVINNRNNTIN 419 I II + LL I I Sbjct: 369 HISIIFYLLLNSLLFIQTNYTYIQ 392 >UniRef50_A1AXG4 O-antigen polymerase n=1 Tax=Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) RepID=A1AXG4_RUTMC Length = 411 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 123/294 (41%), Gaps = 12/294 (4%) Query: 133 ESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKK 192 + ++ + + + YA+Y NS DR+ G + T + + V+ + + Sbjct: 117 KHMVLAIKLSIIIGSIYAVYQNSYLGIDRVEAGADSPTIFGFIMVFFAFVAIIDVWSQTN 176 Query: 193 NHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI-AIL 251 L Y + L+ TR + ++F ++ + + ++ + +++++ A++ Sbjct: 177 KEKLFSFLIFLLASYSIILSGTRISWMIFLVLFFSVIFIWFIQGCLTKKGLLLIVVTAVI 236 Query: 252 ASIVIIFNKPIQNRYNEALNDLNSYT-NANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 ++ I +K + +R N A ++ +++ N NS S+ RL+M+ GL F + P + Sbjct: 237 TTVFFIHSKQVNDRINVAFEEIKTFSKNKNSYGSIDLRLSMWRGGLAAFKQQPIIGYGYQ 296 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 + + + + L LHN+ I + G++G+ L L F I +K+ Sbjct: 297 NTGLAASRYTSG--SYEKGLIKGQKMLHNDYINSLVGFGIVGLLVLLMLLFLPLAIFFKR 354 Query: 371 --------RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 + L+ + + ++D I + ++ + +LL + ++ Sbjct: 355 LRTNKDFTKNAIGLLFIIALSVYAITDSIYSHNVMRSFVVFFLGVLLPVPTKSR 408 >UniRef50_A8T0D4 Putative O-antigen ligase n=1 Tax=Vibrio sp. AND4 RepID=A8T0D4_9VIBR Length = 425 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 65/338 (19%), Positives = 122/338 (36%), Gaps = 22/338 (6%) Query: 19 MILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSI 78 M+L + I CF M+I + + + + I + + +N L L Sbjct: 19 MVLMYLPLIWCFSGMLIYPSADKTQVILVLLAIISSFIVHDKKTIIDNVKQNQLAKFLLF 78 Query: 79 FLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVF-LTLTSQLKSKKESVLY 137 IG + F H Y ++ G + F S S K + Sbjct: 79 LTIGAV--------------FLKLLHGYSSSVIRAFSGLLLYFAFIPKSTFSSIKNKLPA 124 Query: 138 TLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL 197 L + Y + + E R + +G + K + Sbjct: 125 LLLLSGIISFVYGFWFTYVLELGRAWSINPIPYSTVSVAIGVGSLY-FLFSNASKQIQRM 183 Query: 198 FLLNSCAVLYVLALTQTRATLLLF-PIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 LL+ L V+ +Q R T L + + L A Y+K + + + LI I++ ++ Sbjct: 184 MLLSFALSLNVIIFSQARGTALALCSVAALVILFAVYSKLEIRKQLTYIFLIVIVS--LL 241 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 IQNR + N++ +++ +S+G R M++ + + + P + ++ Sbjct: 242 ANTHLIQNRIDFTANEMQRIESSDMNSSIGLRFQMWKAAVYLIKEKPLLGYG-DDHKQAK 300 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIF 354 LL + + A+ F+ H HNE I +L GL G+ Sbjct: 301 QLLADQGIITQDAVPFT--HYHNEFISDWALDGLTGVV 336 >UniRef50_B9MAP4 O-antigen polymerase n=2 Tax=Comamonadaceae RepID=B9MAP4_DIAST Length = 444 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 122/299 (40%), Gaps = 17/299 (5%) Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 + + + L ++W + F S AK + L+ ++ S +V Sbjct: 60 ILLASLCLTGMLWTAPFDRAWSI-----SGLGIGAKYAFAA--LTLWALSQRVLSP-HAV 111 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 ++ + + + G A Y + + G A M +GI + + + Sbjct: 112 VWGVAAGAVGALGIAAYQYLVLHWVKAQ-GFTNAIEYGGIAMYMGIAAWAMAMLGRWRWH 170 Query: 196 FLFLLNSCA--VLYVLALTQTRATLLLFPIICV-AALIAYYNKSPKKFTSSIVLLIAILA 252 + L C + L+++R + + P++ L+A+ N + +++I ++ A Sbjct: 171 QIAALGICGACGVLASLLSESRGSWVTVPLLLAAIWLMAWRNGYRRIASAAIAAMLIGGA 230 Query: 253 SIVIIFNKPIQNRYNEALNDLNSY---TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSA 309 ++V+ K + R + A+ + Y + TS+G RL + + +++ + P + Sbjct: 231 ALVLPAYKKFEQRADLAVQEARHYLAEPQKYAETSIGQRLEQWRLAVDLIEERPVAGWGL 290 Query: 310 ESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY 368 + ++ +V + +++ H HNEI++ +GL+G+ LF Y + Y+ + Sbjct: 291 DGYPKAKQAMVDKGAAHPSVMQYG--HAHNEILDMWVKRGLIGLLILLFFYAAPLYVFW 347 >UniRef50_Q65W10 RfaL protein n=2 Tax=Pasteurellaceae RepID=Q65W10_MANSM Length = 419 Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 106/272 (38%), Gaps = 13/272 (4%) Query: 129 KSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATG----AAYSTMLIGIVSG 184 K S L + +IAG I+ + + ++++ A S + +V Sbjct: 106 FPIKFSTLIYAIPMGSMIAGITALIDRFYLHSQMAYAPRIMHIQGGDIAMSLGMFSLVCC 165 Query: 185 VAI-LYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSS 243 + + +K LL + + + L+ R + P + AY + F S Sbjct: 166 IYFFIKQQKKWMLFCLLATLSGMLGSILSTARGGWIGVPFVLCFIFWAYRKYLSRTFFVS 225 Query: 244 IVLLIAILASIVI-IFNKPIQNRYNEALNDLNSY---TNANSVTSLGARLAMYEIGLNIF 299 ++ ++ + + + I N I R N A +D+ SY + TS+GAR M++ + Sbjct: 226 VISILVVAVGVAVSIPNTKIMKRINAAQHDITSYVDNKKGSDSTSVGARFEMWKSAFLMI 285 Query: 300 IKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFL 359 + P E + + + A +F+ H HN+ ++ S +G++G + L + Sbjct: 286 KEKPVFGWGIEGVNQMRKEHQKQGIISKYASQFT--HAHNQYLDDFSKRGVLGFIALLAV 343 Query: 360 YFSLFYIAYKKRALGLLILTLGIVGIGLSDVI 391 + + ++ L + + G+ VI Sbjct: 344 FLVPM--RFFRKNLSDRLEVKVVAIFGMVHVI 373 >UniRef50_A5KZV1 Putative O-antigen ligase n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZV1_9GAMM Length = 399 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 116/312 (37%), Gaps = 8/312 (2%) Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 +W + + F YH + + G + + ++ ++K + + + S I Sbjct: 64 VWLISISCIYTVFSYYYHGSSSRELRALIGLTLFLIAFPYKILTQK-VIQWVVLICSLAI 122 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVL 206 ++Y N +R + + A ++ I + + L L++ L Sbjct: 123 CANSVYFNLYIGMERDAGYINPIPYATACALISIIAFSILLDNPSLKEKLLPLVSFLISL 182 Query: 207 YVLALTQTRATLLLFPIICVAALIAYYNKS---PKKFTSSIVLLIAILASIVIIFNKPIQ 263 + L++ R L F + LIA K+ K S V + ++ +F + I Sbjct: 183 PPIILSEARGIWLAFSLSIFFILIAKCIKNPPSKSKVLLSFVFTAVLTSTGAFLFKEKIN 242 Query: 264 NRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEH 323 RY + + ++ + + TS+G RL M+ + + + P E R E + + Sbjct: 243 ERYEKTIYEIERIQSNDYSTSIGLRLKMWMLVPELIKQKPILGHGQEQR-EILRSKLKRG 301 Query: 324 NRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA---LGLLILTL 380 F++ H HN+ ++ G++G+ + L I K + ++ L Sbjct: 302 EISHQLFYFASAHYHNQFLDKMVKSGVIGLTLVIGLLIYPLMIVKKLPSLDTYIVIGLVS 361 Query: 381 GIVGIGLSDVII 392 GL+DV Sbjct: 362 LFFIAGLTDVPF 373 >UniRef50_Q1YWB6 Putative O-antigen ligase n=2 Tax=Photobacterium profundum RepID=Q1YWB6_PHOPR Length = 393 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 57/335 (17%), Positives = 113/335 (33%), Gaps = 6/335 (1%) Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 +W + F YH + + G+ + + +L +++ + TL + S L Sbjct: 62 LWLLLVITGYALFSYFYHGGSSREIRALIGASLFLICFPRELLTQRVLLGLTLLA-SSLC 120 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVL 206 YA Y + +R + + A + + N L L Sbjct: 121 LAYACYYSLYININRAEWPINAIPFATMCAVFGILAIAQLSRTVSLNVKLQAALALIFSL 180 Query: 207 YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRY 266 + T TR L F I + L+ + + + L A+L SI I I+ R Sbjct: 181 TAIIFTDTRGIWLGFTIAAIIILLLKIKNKGINWKYTTIGLAALL-SIGFIVKPQIEQRI 239 Query: 267 NEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 + ++N+ T+ N TS+G R M+++ ++ + + A + L + Sbjct: 240 VQTQAEINAITSGNLDTSIGFRFQMWKLAPDMLKDNYILGLG-DKHALRFDKLYNQGLVS 298 Query: 327 RGALEFSNVHLHNEIIEAGSLKGLMG---IFSTLFLYFSLFYIAYKKRALGLLILTLGIV 383 F H HN+ ++ G +G + L + + R ++ Sbjct: 299 ERLFNFKPAHYHNQYLDNFIKTGGIGLLLFLALLIVPITQVKYVSTDRKYKIIGTVGLFA 358 Query: 384 GIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTI 418 L+DV + I L+ +N + Sbjct: 359 IAALTDVPFNHGQTLSTYLLLICGLINYSNPKKGL 393 >UniRef50_D0IMS5 O-antigen ligase n=11 Tax=Vibrio RepID=D0IMS5_9VIBR Length = 404 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 58/387 (14%), Positives = 134/387 (34%), Gaps = 23/387 (5%) Query: 33 MIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAF 92 ++ F + + +VCL +I G++ N + + IF G++ + Sbjct: 24 LMAIFNFPDTKFILSRLIPVVCLYGMIKYGKEIKDNYNSQLKSFLIFGFGVVVVYSIYHV 83 Query: 93 KVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMY 152 + + A+ I + ++ K V Y + + + A Y Sbjct: 84 IRGDG---------FSLARTLITSLAYLIFVPWKRINPKV--VCYIIAIAAIVCGLNAFY 132 Query: 153 INSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALT 212 + R+ A Y + L+ + + K L + L + +T Sbjct: 133 ERYVLNIYRVGIATNPIPYALYVSFLVLSCVYLLLNSQSKTLKLLASIGGSLSLSAIIMT 192 Query: 213 QTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALND 272 R +L P+ + +I K + +SI+ ++ L IF I R + + Sbjct: 193 DVRGVILFLPVAIIYLVITTIKPIWKYYVASILSVMFFLGVFYTIFQPEINARITQTQGE 252 Query: 273 LNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEF 332 + +S+G RL ++ G++I ++P + ++ + + Sbjct: 253 IALIKQGYLSSSIGVRLDLWMHGVDIIAQNPLFGVGDIGLQDRISKMTNPGAATQ----- 307 Query: 333 SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR-----ALGLLILTLGIVGIGL 387 HLHN+ ++ + G++G +L + + + + ++ GL Sbjct: 308 --PHLHNQYLDFLARYGIVGTLVIFLFCLALIFNLNNSAFEYIGNPLVNSMFMMLIFAGL 365 Query: 388 SDVIIWARSIPIIIISAIVLLLVINNR 414 +DV + I ++ LL+ + + Sbjct: 366 TDVPLHHTHIVYLLTILCGLLIRFSEK 392 >UniRef50_Q0AIV7 O-antigen polymerase n=2 Tax=Nitrosomonas RepID=Q0AIV7_NITEC Length = 405 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 62/312 (19%), Positives = 122/312 (39%), Gaps = 13/312 (4%) Query: 111 KIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTAT 170 K FI I F +L ++ + + L ++ G Y ++ IS G + Sbjct: 71 KYFILLIIIPFFSLLNKERLPWVTGALISGYLGVVVLG--GYQYAVLGEQGISL-FGMSY 127 Query: 171 GAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYV----LALTQTRATLLLFPIICV 226 S + IG++ V + + FL + + L + +LL ++ + Sbjct: 128 LNFSSALGIGVILAVYGGWVTLSRMRWFLSALLWITALLLLFLQFRENARGILLSTVMIL 187 Query: 227 AALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLG 286 + + K +S + I + + + R +DL + + TS+G Sbjct: 188 LLMFCLRYQVKGKVLASYLASIIAVTVLFAASSDVFHKRLEAIGSDLQLFQQGHYQTSVG 247 Query: 287 ARLAMYEIGLNIFIKSP-FSFRSAESRAESMNLLVAEHNRLRGALE--FSNVHLHNEIIE 343 RLA+++IGL+ + +P S ++ N ++ + L H HNE+IE Sbjct: 248 YRLAIWDIGLHGLVDAPVIGHGSGMAKHYLQNSFMSYKEGIYQDLPEFHEAKHFHNELIE 307 Query: 344 AGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLI--LTLGIVGIGLSDVIIWARSIPIII 401 G GL+GI + +FL + F +K+ + LL + GL+D + IP + Sbjct: 308 IGVHLGLLGILAFIFLLWCWFK-TFKQHQMALLGGAIVCFTFLSGLTDTFLLYSRIPPFL 366 Query: 402 ISAIVLLLVINN 413 ++ + + Sbjct: 367 LAVTAIAVCWQR 378 >UniRef50_P44067 Uncharacterized protein HI0874 n=5 Tax=Pasteurellaceae RepID=Y874_HAEIN Length = 399 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 98/249 (39%), Gaps = 7/249 (2%) Query: 126 SQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRI---SFGVGTATGAAYSTMLIGIV 182 K++++LY + S + + A++ ++ + + A ++ Sbjct: 102 KNFPIKRKTILYAIPSSALITGCVALFQKFALGYEKPFPETMHIQMGNIAISLATFSIVI 161 Query: 183 SGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYY-NKSPKKFT 241 + + + + + AL+ R + P++ L Y + K Sbjct: 162 TLHFFIKKQYKSTLFGFVAIILAIMTSALSGARGGWIGLPVVVGIILFLYKEFINKKLII 221 Query: 242 SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFI 300 + I ++ L +++ I+ RYN A +D+ SY N TSLGAR M+E L Sbjct: 222 TLIAIITIGLTALITSPKFGIEKRYNAAKSDIVSYLEKNNRNTSLGARFDMWENALIAIK 281 Query: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 ++P ++ E + V + L F + LHN+ +E+ +GL+G + + + Sbjct: 282 EAPIFGHGSDGYDEFRHKQVKSKQMAKTTLNFGS--LHNQYLESWVKRGLVGFIALILII 339 Query: 361 FSLFYIAYK 369 + + K Sbjct: 340 LTPIFYFIK 348 >UniRef50_D0Z1E7 O-antigen ligase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z1E7_LISDA Length = 395 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 125/347 (36%), Gaps = 15/347 (4%) Query: 56 LSLILRGRQENYNIKNLILPLSIFLIGLLDL--------IWYSAFKVDNSPFRATYHSYL 107 + ++ G + + + + ++ GL + +W + F YH Sbjct: 21 MLILKNGDKTMVAMIIISIIATVCRYGLTSIKQNLSNKMLWLVIAIAAYTLFSYAYHGLS 80 Query: 108 NTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVG 167 + I GS + L L +QL ++ + L L L +++ + I+ S+ + Sbjct: 81 SRELRAIIGSLLFLLFLPTQLITQ--NRLIGLVVLGSIVSSLYAWYYGIYLGLGRSWPMN 138 Query: 168 TATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVA 227 + + A+ T K + + L + ++R L + Sbjct: 139 PIPYSTLIVSFAIMSLSFALASTDKRVKVITTVCFSFSCLALIIGESRGLWLALALTLFT 198 Query: 228 A-LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLG 286 + + K+ I+ L+ ++ S+ I+ ++ R+ + + + N N TS+G Sbjct: 199 FAIYSMIRFYQPKYWLYIMGLVILIGSMGIVLKPQLEARWQQTEQEYQAIQNGNMCTSIG 258 Query: 287 ARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGS 346 RL M++ + P ++ + ++ L + + ++ H HN+ ++ Sbjct: 259 LRLQMWQAASILVEDDPILGTG-DAHIQKLDELYHQGRIEKCLYQYQPAHYHNQYLDRFV 317 Query: 347 LKGLMGIFSTLFLYFSL---FYIAYKKRALGLLILTLGIVGIGLSDV 390 G++G+ L L + LL + + L+DV Sbjct: 318 KNGVIGLILLLALLLCPITQIKKLNNTKQYILLGIITVYISASLTDV 364 >UniRef50_A6VLR5 O-antigen polymerase n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VLR5_ACTSZ Length = 415 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 57/325 (17%), Positives = 123/325 (37%), Gaps = 20/325 (6%) Query: 111 KIFIFGSFIVFLTLTSQLKSKKE--SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGT 168 + + + FL L+ K + L+ S +I + ++ R+ FG Sbjct: 89 HVDVVSQLLAFLPTYFLLRKFKICLNALFIAIPCSAVIGFVVAAYDRLYLGLRLPFGNMI 148 Query: 169 ATGAAYSTMLIGIVSGVAILYTKKNHPFL----FLLNSCAVLYVLALTQTRATLLLFPII 224 A + +G +S Y K + LL L L+ R + P + Sbjct: 149 HIQAGDMALSLGWLSFPLFFYALKKKQKILTALCLLGILGGLGASVLSTARGGWISLPPV 208 Query: 225 CVAALIAYYNKSPKKFTSSIVLLIAILASIVI-IFNKPIQNRYNEALNDLNSY-TNANSV 282 + + + + KKF + + L+ + A ++ I + R ++A +D+ +Y N Sbjct: 209 LLVLIYIFRQQLSKKFLAGLCTLVVVGAVVLFMIPQTQVSQRIHQAHSDIVNYFEKNNPN 268 Query: 283 TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEII 342 TS+GAR M++ L I + P + ++ E + A + H HN + Sbjct: 269 TSIGARFEMWKGALMIAQEHPLAGVGEDAFKTHFKRYATEGKMAKSASIY--AHAHNLYL 326 Query: 343 EAGSLKGLMGIFSTLFLYFSLFYIAYK--------KRALGLLIL--TLGIVGIGLSDVII 392 ++ + G+ G+ S L ++F ++ ++ +G L + + ++ G+S+ Sbjct: 327 DSLAKNGIFGLLSLLLVFFVPLRKFWRTAKSADLNQKTIGALGVVHVVAVLFYGMSEAFF 386 Query: 393 WARSIPIIIISAIVLLLVINNRNNT 417 + + +L + T Sbjct: 387 SLHATQMFYFFLAFVLYSMTESAQT 411 >UniRef50_B7VTJ0 Putative O-antigen ligase n=2 Tax=Vibrio RepID=B7VTJ0_VIBSL Length = 392 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 103/296 (34%), Gaps = 2/296 (0%) Query: 119 IVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTML 178 +VF K + ++ Y DR S A+ Sbjct: 96 LVFFLFYRNGFVKLSDIQNLCFTSVVSTTVLVAYYIFFLSGDRGSLTSNALIFASIQGFA 155 Query: 179 IGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPK 238 + ++ + + + P + + L +R LL II + L + + Sbjct: 156 VVLLLALGCISYEGKRPKTMATLAFIGFLSMFLVGSRGPLLAVIIIGLVVLFKMMMQHRQ 215 Query: 239 KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNI 298 + + + + ++ + R + +L++ + + N TS+G RL MY+ G + Sbjct: 216 YKALLGISAMVVFSVFLMSKYDVVSERIDYSLHEYHQISQGNMDTSVGLRLQMYQAGFDF 275 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 F+ SP + A+ L G N HLHN I+ + GL+GI + Sbjct: 276 FVNSPLLGIGGDKEAQLDKLSFT--PTNSGKRFIVNAHLHNNYIDKAASSGLVGIALLIL 333 Query: 359 LYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 + + K + +L+ + + L D + ++ I +LL + R Sbjct: 334 SLMYPLFNSRYKLSPIVLLPVVYFSLMCLFDSPFRNGDLAVMYFVFIGVLLKLQVR 389 >UniRef50_C8SG72 O-antigen polymerase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SG72_9RHIZ Length = 459 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 132/344 (38%), Gaps = 23/344 (6%) Query: 27 ILCFFSMIIAFVDNTFSIKI---YNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 I +FS++ F + +N + +L + L+ R+ N + + L + + Sbjct: 16 INIYFSILCFFFPPVLGSVVSFVFNGGGLSSVLLIALKKRRFNVDPAMMALTAAFYAYCA 75 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 +L S + + + +F+ F S +++ L + L Sbjct: 76 ANL--------AASIVNNAIA--RDASHLIPLITFLFFPVSYSTWSITQKTTLVRIIVLC 125 Query: 144 FLIAGYAMYINSIHENDRISF----GVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFL 199 + A +A + + + R+ G G A A L +V L + H + Sbjct: 126 SMAACFAALLLAAFQQYRLGIRAEGGAGNAIVFAEVLCLAVMVCVAGALSGVERHRIALI 185 Query: 200 LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP-KKFTSSIVLLIAILASIVIIF 258 + + + TR + I +A L+ ++ + +++++A+ I Sbjct: 186 CAALGGTIAIVYSGTRIIWVALLIAGIAVLLINQHRVRGRNVVRLLLMVVAVGIVIAAFG 245 Query: 259 NKPIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 + I R + +DL++ ++ + TS+G R+A+++IGL F + P + Sbjct: 246 FQTISGRLDFLRSDLSALGSHGDYNTSVGIRVALWQIGLKAFREMPLLGHGVG----ATQ 301 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF 361 LL++ + + AL H HN + A G++G + ++ Sbjct: 302 LLISHGFQNQFALSLGFNHFHNGFLTALVQAGILGAVALAAIFV 345 >UniRef50_B5JVL1 O-Antigen Polymerase family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVL1_9GAMM Length = 308 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 108/267 (40%), Gaps = 19/267 (7%) Query: 165 GVGTATGAAYSTMLIGIVSGVAI--LYTKKNHPFLFLLNSCAVLYVL--ALTQTRATLLL 220 GV A +++G +S +++ + +K ++F + A ++ L+ +R L Sbjct: 38 GVVNAIYFGNIALMLGTISAISLYQNWQEKKWIWVFFAVNGATFGIIGSVLSLSRGGWLA 97 Query: 221 FPII--CVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTN 278 I+ ++ K F S++L+ A+ AS ++ R+ +++ + Sbjct: 98 GLILTSLFFFILLIKGKVKLLFLFSLLLVSALFASYFFSHEGMLKKRFQNTYENISQFDP 157 Query: 279 ANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLH 338 NS TS+G RL M+ + +SPF +S A + ++E H H Sbjct: 158 KNSETSIGYRLRMWLQAIENIKESPFFGSGPDSFA-----FINPDPDPSLSIESEYYHAH 212 Query: 339 NEIIEAGSLKGLMGIFSTLFLYF--------SLFYIAYKKRALGLLILTLGIVGIGLSDV 390 N+ + S G+ G +FLY LF+ + L + + L+DV Sbjct: 213 NDYLNTLSNTGITGFIPLVFLYSMPLLYFTRKLFFSTSHQWPLSGACIVVLYACFSLTDV 272 Query: 391 IIWARSIPIIIISAIVLLLVINNRNNT 417 + + I + I L +++ + N + Sbjct: 273 MFYRSVGTIYFLLLIPLFMILCDHNKS 299 >UniRef50_A0KQV1 O-antigen polymerase n=5 Tax=Aeromonas RepID=A0KQV1_AERHH Length = 404 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 135/387 (34%), Gaps = 21/387 (5%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 +T I F + +A + + +T I LL+ + +++ IL + + Sbjct: 20 LTIIFSFCGLFLAPFGQSIQSNLLAVTGIFGLLNYFVGKQRDVGLKDRRIL-WGLLVYAA 78 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 + + R + +++ L K + Y L Sbjct: 79 MIFVNRLIHGDQYGVMRGLF--------------YVLVFALMMPRKPSLLMLGYLAIVLG 124 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLF--LLN 201 + G H DR+ G A + + + + I++ + L+ Sbjct: 125 GMGLGILSIWQYQHGIDRVE-GFTNAILFSQAALTLVILNWFVFQQERLPGWLRGGSLVG 183 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 A L+ L L+Q+R L F +I +A +I Y ++ +L ++ N+ Sbjct: 184 LMAALFALYLSQSRGVWLAFGVI-LAYVICYKAYFKPWKYVAVAMLCVASIGVIYHTNQL 242 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 +Q+R + A++DL + +S G R+ ++ F+ +P + Sbjct: 243 VQSRVHSAVSDLKLVEEGSYDSSWGLRVVAWQSAWLGFLDAPLAGVGTNGFDALKRRQAE 302 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK--KRALGLLILT 379 L H HN+ ++ ++G +G + + Y+A R +++ Sbjct: 303 SGVLSPSILSSELAHAHNQYMQNLVIRGSIGFIALVIFLGLPLYLAANNISRISAGVLVP 362 Query: 380 LGIVGIGLSDVIIWARSIPIIIISAIV 406 L V LSDV + + + ++V Sbjct: 363 LAFVINSLSDVPFEHQGVLYLYTLSLV 389 >UniRef50_C4L785 O-antigen polymerase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L785_TOLAT Length = 416 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 122/323 (37%), Gaps = 20/323 (6%) Query: 113 FIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGA 172 I G+ I+ L + + L + + AG + + +F Sbjct: 93 VIMGAAILLFCLRNP---PRFKWLMLGIATGAITAGSRALFDRLVTGYGRAFEWMVPIQG 149 Query: 173 AYSTMLIGIVSGVAILYTKKNHP----FLFLLNSCAVLYVLALTQTRATLLLFPIICVAA 228 +M +G++S ++++ K F L S + L+ +R +LFP+I Sbjct: 150 GDISMTLGLLSLCGVMWSIKTANKGLIVYFALASILGVLGSILSGSRGGWVLFPVILFVI 209 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNA-NSVTSLGA 287 + + K + L + +L + + + R A +D++ Y + N TSLG Sbjct: 210 YRIFKDWFSPKVKLGMGLALCLLVAFCLTPQSGVPTRIAAAKSDISLYLSGQNKNTSLGH 269 Query: 288 RLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSL 347 R +++ ++ F++ P +S + + A +F N H HN+ ++ + Sbjct: 270 RFEIWKSSVDSFLEKPLFGWGYHGVRQSQEQQYKQGLITKEAYDF-NSHAHNQFLDEMAK 328 Query: 348 KGLMGIFSTLFLYFSL-----------FYIAYKKRALGLLILTLGIVGIGLSDVIIWARS 396 +G++G+ + L L F + A +I+ L + LS ++ S Sbjct: 329 RGIIGLGALLALLLIPLYLFKQYLNQSFTPETRTLAAAGVIVVLSTIDYSLSQAFLYHSS 388 Query: 397 IPIIIISAIVLLLVINNRNNTIN 419 + ++I+ L IN Sbjct: 389 GIVFYCASIIFLYSAVRSQQPIN 411 >UniRef50_C4KCH4 O-antigen polymerase n=1 Tax=Thauera sp. MZ1T RepID=C4KCH4_THASP Length = 439 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 92/282 (32%), Gaps = 7/282 (2%) Query: 132 KESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG-IVSGVAILYT 190 L+ ++ LI G A E + + L+ I+ A ++ Sbjct: 119 NIKALWAGMAVGSLIGGVAGAQEVWIEGAQRAGAGIHPIAYGSILALLSMILLYGATIFR 178 Query: 191 KKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNK-SPKKFTSSIVLLIA 249 + L + L+ TR + + + + Sbjct: 179 ETTWRIFLSAAFAVGLTGVLLSGTRGLYAALAVCMAFIGYRALRQAGVSSRAVWLTAAFS 238 Query: 250 ILASIVIIFN-KPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRS 308 ++ +I + + R E + N TS+G RL M+ GL I + P Sbjct: 239 LILTIAVASQIPAVNERLQETQREYAEIYEGNLDTSIGHRLQMWHAGLFIISERPLFGLG 298 Query: 309 AE--SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 + R + + EH L + HLHN I + GL+G+ + L F Sbjct: 299 PDVTKRQTATQAFMEEHQYGPWVLRIYD-HLHNLYINEAATFGLIGLTALAGLLFGALKG 357 Query: 367 AYKKRALGLLILTLGIVGIGLSDVII-WARSIPIIIISAIVL 407 + + + + I+ GL++ I+ R + +I VL Sbjct: 358 TFGPTRTMINLTIMIILLEGLTETILNHHRLMMTFMILVTVL 399 >UniRef50_B6EPB7 O-antigen ligase WaaL n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EPB7_ALISL Length = 408 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 92/259 (35%), Gaps = 7/259 (2%) Query: 110 AKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGY-AMYINSIHENDRISFGVGT 168 ++ + + FL + +++ I+ Y + YI + Sbjct: 87 SRTVLASFILCFLVTYKPNPAPLFLAAPIGAAIAGFISFYHSFYIGGCAFVGTFGYMPIQ 146 Query: 169 ATGAAYSTMLIGIVSGVAILYTKKNHPFLF-LLNSCAVLYVLALTQTRATLLLFPIICVA 227 G S ++S T++ + +F + + L+ R LL P + + Sbjct: 147 IGGIIASLATFSVISFFYYRKTEQKNFAVFSFVAANLGYIATLLSGARGAWLLTPFVLLI 206 Query: 228 ALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGA 287 L KK +L I SI + I +R + +DL Y+ S +S GA Sbjct: 207 VLYLNKELINKKIVGYALLAAIIDLSIA---SAQITSRLDAIQSDLTQYSAEQSASSSGA 263 Query: 288 RLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSL 347 RL M++ L +SP + + + AL++S HN+ +E Sbjct: 264 RLEMWKSALYSAQESPLFGQGFSGIEAAKQRQLDAGLIDPIALKYSRA--HNQYLEDLQT 321 Query: 348 KGLMGIFSTLFLYFSLFYI 366 KG+ G+ L ++ F Sbjct: 322 KGIFGLSVLLIMFAVPFAF 340 >UniRef50_C2HRF0 O-antigen ligase n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2HRF0_VIBCH Length = 416 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 81/411 (19%), Positives = 154/411 (37%), Gaps = 29/411 (7%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRG----RQENYNIKN 71 K +IL+ I L FF + + + I++ I ++ L + E + Sbjct: 14 KVKIILDCIFAYLPFFVSFLLIFNVPDTKYIWSRAVICSIVYLFIFHFDGFSVEIKSKGY 73 Query: 72 LILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSK 131 LI+PL IF + + + NS F T + + F+ L S L Sbjct: 74 LIVPLLIFCL---YFFFMQYYNDGNSNFPRT-----------LCYIVLYFIVLPSHLIH- 118 Query: 132 KESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTK 191 + Y L + L + Y + N R+ F V ++ L+ I S + Sbjct: 119 IHVLKYMLVLGALLSSFVGFYEFFMLGNTRVGFYVLNPIPISFYFGLLLIFSVWLSFESY 178 Query: 192 KNHPFLFLLNSCAVL---YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI 248 K + L L+ + + LT+TRA+ + I+ ++ ++ S K S + + Sbjct: 179 KKNNILCGLSVVSSFLLFICIILTETRASWMALVIVFLSCIVYSIFNSNLKKKSIYLSSL 238 Query: 249 AILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRS 308 + + NR +A + Y N N +S G R+ +++ GL++ K+P Sbjct: 239 LAVIIGFGWNIPIVHNRIYDAYYQIEQYKNDNYNSSTGIRIKLWQAGLDMAKKAPLLGLH 298 Query: 309 AESRAESMNLLVAEHN---RLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY 365 N + E LR L N + HN+ +++ G +G+ + F Sbjct: 299 RVDVQHISNAKIQEGKYPEFLRSFLIHPNPNFHNQYVQSFVNSGFIGLLFLIVFIFLPIL 358 Query: 366 IAYKKRALGLLILTLGIVGIGLS----DVIIWARSIPIIIISAIVLLLVIN 412 + K R + +++ I+ L D + + I S I++L + Sbjct: 359 VFIKNRKINTTLISCAIIQFSLISLFFDSMFLYSHVVIFYCSIIMVLYYFS 409 >UniRef50_Q9CJX6 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CJX6_PASMU Length = 257 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 9/202 (4%) Query: 177 MLIGIVSGVAILYTKKNHPFLFLL----NSCAVLYVLALTQTRATLLLFPIICVAALIAY 232 M +G+ S V L++ + +L + + L+ R + P++ AL AY Sbjct: 1 MSLGLFSFVIGLHSFSRQQYRQMLWAIIATLFGILGSVLSTARGGWIGLPLLLCFALFAY 60 Query: 233 YNK-SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY--TNANSVTSLGARL 289 S K + + +LA++ + +R EA + Y A TS+GAR Sbjct: 61 RQYLSKKILFFVSLFFVFLLAAVAFAPKTKLISRVTEAYTETQQYFDAQAEQSTSIGARF 120 Query: 290 AMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKG 349 A+++ L + + P E + E A F+ H HN+ ++ S G Sbjct: 121 ALWKSALLMAKEKPLLGWGNAGAMEKRQVQQQEGMISEYAANFT--HAHNQYLDNLSKYG 178 Query: 350 LMGIFSTLFLYFSLFYIAYKKR 371 L+G+ + L ++ F Y+KR Sbjct: 179 LVGLVALLAIFSVPFCYFYRKR 200 >UniRef50_C8N937 Putative uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N937_9GAMM Length = 406 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 97/265 (36%), Gaps = 13/265 (4%) Query: 115 FGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYIN---SIHENDRISFGVGTATG 171 F + + L + + K ++ + L A Y + + Sbjct: 89 FFAVPLLLYFLATVPPKGRAIWAGAACGALLGLASAWYYSHFAPELLPAGRAARYLHPIQ 148 Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLN-SCAVLYVLALTQTRATL--LLFPIICVAA 228 ML+ +++ ++ ++ L L A + L+QTR + L + + + Sbjct: 149 LGNIAMLLALIAACSLRARPRHWQLLLALAGIVAGVCTTLLSQTRGSFFALAWTLFFLGL 208 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFN-KPIQNRYNEALNDLNSYTNANSVTSLGA 287 L + + ++AI A++ + N I+ R A +D+ Y + TS+GA Sbjct: 209 LSLRRRHFRARSVALSATIVAITAALFWLGNMDVIEERLAAARHDIALYEQGKADTSIGA 268 Query: 288 RLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSL 347 R M+ P + L V + A HLHNE ++A + Sbjct: 269 RFEMWRFAWQEGSSYPLIGPG------TAQLNVDKDGWRSAADLAPFGHLHNEFLDAFAR 322 Query: 348 KGLMGIFSTLFLYFSLFYIAYKKRA 372 +GL+G+ + L+L+ ++ + Sbjct: 323 RGLLGLAAVLYLFLVPLWLYRRGEE 347 >UniRef50_A1WKR6 O-antigen polymerase n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WKR6_VEREI Length = 415 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 90/228 (39%), Gaps = 23/228 (10%) Query: 209 LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFN-KPIQNRYN 267 AL+Q+R L ++ V + A+ L A+L +V++ + R++ Sbjct: 186 SALSQSRGGWLA--LVLVLPVSAWLLARTIGPRRVCWGLCALLLGVVVLAQMPVVGQRFD 243 Query: 268 EALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 +A ++ +Y + +S+G RLA + + + + P + + VA Sbjct: 244 QARQEVQTYREMGDDSSSVGQRLAHWRLAWEMGRERPLTGWGRTGYMQEKVRRVAAGLVR 303 Query: 327 RGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY---FSLFYIA----------YKKRAL 373 L F H+HNE+++ +G+ G+ L Y +LF+ K AL Sbjct: 304 PSVLTFG--HVHNEVLDLFVKRGIFGVLLLLLFYGTALALFWPTAARIRDAAGKIDKEAL 361 Query: 374 GLLIL----TLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 L ++ L +G G + V + S + + L+L R + Sbjct: 362 SLCLVGVSMPLSYIGFGFTQVFLAHNSGNMFYLFMCPLVLAALQRRRS 409 >UniRef50_A7JUL1 Possible O-antigen ligase n=12 Tax=Pasteurellaceae RepID=A7JUL1_PASHA Length = 418 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 63/310 (20%), Positives = 118/310 (38%), Gaps = 22/310 (7%) Query: 127 QLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA 186 +L K+ + + L+AG N + F + +L+ + S Sbjct: 112 RLYPIKKETVLHFIPIGALVAGCIAIYQRFILNLKFPFPEIMRIQSGNIAILLSLFSIAI 171 Query: 187 ILYTKKNHPF----LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTS 242 Y +L+ + L+ LT R L F I + I + N + Sbjct: 172 AFYWLSKKRIKTGIAYLVFAMFGLFASILTGARGGWLAF--IPICFFILFLNLRQLNKKA 229 Query: 243 SIVLLIAILASIVIIFNKP---IQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNI 298 ++L+A+++S+ +KP IQ RYN A ND+ + N +SLGAR M+E L Sbjct: 230 IFLILLALISSLSFFISKPEFGIQKRYNAAKNDIIVFLEKGNRHSSLGARFDMWENALIG 289 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 + P + + + L F++ LHN+ +EA +G++G + + Sbjct: 290 IREKPLLGHGSTGYETFKKKQIETKQMAKTTLRFNS--LHNQYLEAFVKRGVVGFMALMA 347 Query: 359 LY---FSLFYIAYKKRA-----LGLLILT--LGIVGIGLSDVIIWARSIPIIIISAIVLL 408 + F +F K + + +L + + LS + S + ++LL Sbjct: 348 ILIIPFVIFAKRLKAKNREVKCMAILGIVHIISHSFFFLSQSFLAHNSGSLFYFFVLILL 407 Query: 409 LVINNRNNTI 418 + +N I Sbjct: 408 YHLVKQNEEI 417 >UniRef50_C3NSX8 O-antigen ligase n=24 Tax=Vibrio RepID=C3NSX8_VIBCJ Length = 399 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 76/407 (18%), Positives = 139/407 (34%), Gaps = 25/407 (6%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 IT F ++ + + FS+ + + + LI G N ++ LS Sbjct: 5 ITKTSIFLTISLLLITPGFSVVAVGLLTLYSSVKLIKNGLNLNKFDIIPLITLSA----- 59 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE--SVLYTLYS 141 Y + + YL+ + + F K ++ + Sbjct: 60 -----YFLSNLPITIIDGDTLRYLDAGIRALLCIPMYFFIKNEISKGANLDNTLCTSTIL 114 Query: 142 LSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLN 201 SF +A Y I R+ G + Y + I+S + +T+ + L+ Sbjct: 115 ASFGALAFAFYQFFILNMPRVD-GFLFSINFGYLAAALAILS-FGLSFTQTRFKYYLYLS 172 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 A LT TR +L + + I K K T L+ +L S+ F+ Sbjct: 173 VVAATVATILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFSPR 232 Query: 262 IQNRYNEALNDLNSYTNAN--SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 IQ R + + +++S + N + S G RL ++ + F +P + R L Sbjct: 233 IQERVDFTIFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPIWGTTYSERESLNIEL 292 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGS---LKGLMGIFSTLFLYFSLFYIAYKKRALGLL 376 E H H++ EA + G++ IF+ L L F +F Y+K + Sbjct: 293 FKEGKVDEWTSTVPRGHAHSQYFEAIASNGTLGILAIFAMLILPFGVFLNDYRKTGSPIS 352 Query: 377 ----ILTLGIVGIGLSDVIIWARSIPII--IISAIVLLLVINNRNNT 417 + G + L++ + A I + AI + R Sbjct: 353 QTGYLFAFGFIIFCLTEAPLQANLIGTFYGFMVAIFYAYIAAKRAKN 399 >UniRef50_C9R1T3 RfaL protein n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R1T3_AGGAD Length = 437 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 111/272 (40%), Gaps = 10/272 (3%) Query: 130 SKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILY 189 + + L LIAG I+ N ++F + M +G+ S Y Sbjct: 129 PIRFNWLLHAIPWGSLIAGITAIIHRFILNYYMAFEYQMHIQSGDIAMSLGMFSLAISFY 188 Query: 190 TKKNHPF----LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIV 245 + L+ + S ++ L+ R + P + + L AY KKF + Sbjct: 189 FFIKRQYHFGALYFVFSLMGVFASLLSTARGGWIGIPFVLLLILFAYRRYLSKKFVAGFF 248 Query: 246 LLIAILAS-IVIIFNKPIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSP 303 +++A++ + + ++ N I+ R A D+ +Y N TS+GAR M++ + + + P Sbjct: 249 IVLALIVTTVAMLPNTKIKERIAAAEYDIIAYFQQNNGSTSVGARFDMWKSVMLMTQEKP 308 Query: 304 FSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSL 363 + +E L + + A F+ H HN+ + S +G +G+ + L ++ Sbjct: 309 IFGWGVQGVSEKRKLQYEQGLISQYAAAFN--HAHNQYFDDLSKRGALGLLALLGVFLVP 366 Query: 364 --FYIAYKKRALGLLILTLGIVGIGLSDVIIW 393 F+I + K L L + + + V+ + Sbjct: 367 LRFFIRHLKSVDLELKLVSLLGAVHIVSVMFY 398 >UniRef50_A1SRT4 O-antigen polymerase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRT4_PSYIN Length = 416 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 46/284 (16%), Positives = 99/284 (34%), Gaps = 16/284 (5%) Query: 150 AMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTK-KNHPFLFLLNSCAVLYV 208 A+Y +R ++L+ ++ K K FL + + L Sbjct: 131 ALYDVFYLGMERAGGRFTVVIEFGDISLLLTAFVLLSYQKLKNKIPQFLIITSILLGLTA 190 Query: 209 LALTQTRATLLLFPIICVAALIAYYNK----SPKKFTSSIVLLIAILASIVIIFNKPIQN 264 + L+Q+R + P++ + Y N S KK+ ++ LL IL + + + + Sbjct: 191 VILSQSRGGWIFIPLLVIIIATHYRNICFDLSKKKWLGTVFLLTTILVAGWLSAGELVSQ 250 Query: 265 RYNEALNDLNSYTNANSVTS-LGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEH 323 R A + + SY ++VT +G R M++ G+ +P + L+ ++ Sbjct: 251 RIKLAEDAIISYQKNDNVTPAVGVRFEMWKGGIQSIKNAPLFGGGDKGIITGKQQLIDQN 310 Query: 324 NRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGL-------- 375 +HN+ ++ G + L ++F +R G Sbjct: 311 KIALSPGIIQWTSVHNQYLDTWGKYGFFTFMAFLAIFFIPLTFFITQRNKGDADTRCASY 370 Query: 376 --LILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + L G + L++ I S + ++++ Sbjct: 371 CGITLCTGYLFFALTESIFTINSTVMFYSFSLIIFYSCAKTARD 414 >UniRef50_A9BR10 O-antigen polymerase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BR10_DELAS Length = 422 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 119/336 (35%), Gaps = 19/336 (5%) Query: 48 NITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYL 107 ++ L +L R Y N L +G+ ++WY +D + + Sbjct: 33 YGAGLMVLGALCFLPRWVRYRQSNGTWLLVALFLGMA-VMWYFLSVLDGG--TGQFDRPV 89 Query: 108 NTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVG 167 FI G+ + + + L AG+ + G Sbjct: 90 K----FILGAVSLLFAMCYP---PTARIFLWGIPLGSAGAGFMALWQVCVLGMERATGYT 142 Query: 168 TATGAAYSTMLIGIVSGV---AILYTKKNHPFLFLLNSCAVLYVLAL-TQTRATLLLFP- 222 A +L+G S + + + + L +L + A+ + +L + +R L Sbjct: 143 NAIQWGNMALLLGCFSCIYAVSFWHQRSLLWRLLVLAAAALGALASLLSGSRGGWLALLP 202 Query: 223 -IICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYT-NAN 280 + L+ Y I + + V+ F + R +E D+++Y N Sbjct: 203 MFFMLMVLVRMYRPQYFGRLLLGCAAIVVALATVMAFIPRVSERVDEVYLDVSTYLYAGN 262 Query: 281 SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNE 340 S TSLG RL Y + + + + P + + M+ VA + + E++ + HN+ Sbjct: 263 SNTSLGTRLEQYRLAVQMIGEKPLLGWGMQGYVDEMHRRVAAGSYGQSIREYNFI--HND 320 Query: 341 IIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLL 376 ++ G+ G+ L+ SL ++ + R L Sbjct: 321 FLDIWVKLGVPGVLLQAALFISLLWLFWPSRRRMAL 356 >UniRef50_C9P8T9 RfaL protein n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P8T9_VIBME Length = 423 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 95/253 (37%), Gaps = 16/253 (6%) Query: 175 STMLIGIVSGVAILYTKKNHPFLFLLNSCAVLY----VLALTQTRATLLLFPIICVAALI 230 M +G ++ Y K F L+ S + L+ +R + P + + L Sbjct: 161 MAMTLGFLALAISFYALKTRQFTLLIVSLLGSFGGVLASFLSGSRGAWIAVPFVLLYLLW 220 Query: 231 AYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLA 290 A + K I+ +I I ++ I +Q+R A++++ Y N +SLG R Sbjct: 221 ANKS-LLNKKIIVIISVITIGIALTISSIDRVQDRVATAVHEIQQYEQDNRYSSLGIRFE 279 Query: 291 MYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGL 350 +++ L F SP R + + H HN+ +E S++GL Sbjct: 280 LWKNALLTFKTSPLIGVGEVERYTLQKIHGDQGLIDYKVAHNFFSHAHNQYLEDLSIRGL 339 Query: 351 MGIFSTLFLYFSLFYIA-----------YKKRALGLLILTLGIVGIGLSDVIIWARSIPI 399 +G+ + L L+ ++ ++ + +++ L + L+ + S I Sbjct: 340 VGLTALLALFLIPLKLSASRYVNPRNPKHQLVSQLVIVHILLFIFYQLTQAMFSHNSGTI 399 Query: 400 IIISAIVLLLVIN 412 V LL + Sbjct: 400 FFSVMTVALLSLV 412 >UniRef50_D0IC13 O-antigen ligase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IC13_VIBHO Length = 412 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 46/294 (15%), Positives = 96/294 (32%), Gaps = 16/294 (5%) Query: 119 IVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTML 178 +++L + + + + L + L AMY R+ A + + Sbjct: 106 LIYLLMLPWAQLPRHYLTRMLIFAAILCGLNAMYEFWGLGIQRVGVATNPIPYALFCAFM 165 Query: 179 IGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPK 238 + ++ + L + LT R +L P++ V ++ S + Sbjct: 166 VLGALHQCLMAKSWPWRIVSWLGVALAGTAIVLTDVRGVILFLPVVMVYMVLRIVQPSFR 225 Query: 239 KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNI 298 + +++ + + F IQ R + N N TS+G RL ++ G I Sbjct: 226 TYLMALLAVALLCGLGYKAFEDKIQQRIAVTEYEFTQIANGNFNTSIGIRLTLWLQGKEI 285 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 ++P ++ E ++ + HLHN+ + + G++G+ L Sbjct: 286 VSQAPIFGVGDDALREDISARFNRGDSNP-------PHLHNQYFDTLARYGVLGLMVLLA 338 Query: 359 LYFSLFYIAYKKR---------ALGLLILTLGIVGIGLSDVIIWARSIPIIIIS 403 + S L L L + GL+DV + + Sbjct: 339 WFVSPLLYVTSSAPHGGVGFSLDPLLSSLMLMVALAGLTDVPFHHTHLVYLFTL 392 >UniRef50_A3N1D5 Putative uncharacterized protein n=6 Tax=Actinobacillus RepID=A3N1D5_ACTP2 Length = 449 Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 98/263 (37%), Gaps = 22/263 (8%) Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFL----FLLNSCAVLYVLALTQTRATLLLFPIICVA 227 A M + + S A+ Y L L++ + LT R + P + A Sbjct: 185 AGDMAMSLAMFSFCALFYFHAQKQRLLTVTCLISGLLAMIASFLTTARGAWIGVPAVLAA 244 Query: 228 ALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY-TNANSVTSLG 286 + K +S++L I S + I RY EA +D+++Y +N+ TS+G Sbjct: 245 IFLLNRKNLSKWVVTSVLL---ITLSGGFFAKETIYQRYLEAKSDISAYVDRSNTSTSVG 301 Query: 287 ARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGS 346 AR M++ L + P E E + + A F H HN+ + + Sbjct: 302 ARFDMWKSSLLGIQEKPLFGWGLEGVKEMRKQHFEQGKISQYASGF--AHAHNQYLHDTA 359 Query: 347 LKGL---MGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVG---------IGLSDVIIWA 394 +G+ + + + LF+ S F+ ++ A L G++G L+ + Sbjct: 360 TRGVLGLIALLAILFVPLSSFWRNVRQAAPNSLAHLWGVLGITHILLMMSYFLTQAFLSH 419 Query: 395 RSIPIIIISAIVLLLVINNRNNT 417 S + + ++ L + Sbjct: 420 NSGVMFYFTVTLIFLGLQKTAQN 442 >UniRef50_Q985Q6 Mll7573 protein n=1 Tax=Mesorhizobium loti RepID=Q985Q6_RHILO Length = 417 Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 131/321 (40%), Gaps = 20/321 (6%) Query: 46 IYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHS 105 ++N A+ +L L LR R+ N + + + ++I+ +L+ A V+++ R H Sbjct: 5 VFNGGALWSVLLLALRKRRFNVDPAMMAMTIAIYAYCAANLV---ASIVNSAIARDALH- 60 Query: 106 YLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEND----R 161 + +F+ F S +++ L + LS + A + + ++ + R Sbjct: 61 ------LIPLVTFLFFPISYSTWSITQKTTLVRIIVLSSMAACFVALLLAVFQQHWLGMR 114 Query: 162 ISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLF 221 G G A A L +V L + H L + + + TR L Sbjct: 115 AEGGAGNAIVFAEVLCLAVLVCVAGALSDIERHRIALLCAALGGTIAIIYSGTRIVWLAL 174 Query: 222 PIICVAALIAYYNKSP-KKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYT-NA 279 I +A L+ ++ + +VLL+A A I + + I R + +DL++ N Sbjct: 175 LIAGIAVLLINQHRLKGRNAIRLLVLLLAAGAVIAAVGFQTISGRVDFLRSDLDALAVNG 234 Query: 280 NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHN 339 + T++G RLA+++IGL F + P + L+ + + ++ H HN Sbjct: 235 DHTTAIGLRLAVWDIGLKAFREMPLFGHGVG----ATQALIKQGFHDQFGMDAGFNHFHN 290 Query: 340 EIIEAGSLKGLMGIFSTLFLY 360 + A GL+G + ++ Sbjct: 291 GFLTALVQAGLLGAVTLAAMF 311 >UniRef50_Q1ZLP1 RfaL protein n=2 Tax=Photobacterium RepID=Q1ZLP1_PHOAS Length = 423 Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 128/347 (36%), Gaps = 25/347 (7%) Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 I++ + + ++ ++I + + + L + S ++ ++ Sbjct: 67 IYFLTYLASTLYYGGSFAEIDMPSRIVLVLPIFLLMLLYPPKINILTSGFIIGSIIAGVV 126 Query: 147 AGYAMY-------INSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP---- 195 A +Y + ++++ S + M +G++S LY Sbjct: 127 AMIHIYDFKTGRAFSDLYKSIHPSLKGYMPIQSGNMAMTLGVISLTISLYYLDQKSWWKF 186 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 L L+ + +Y L+ +R + P I + L + K + +++ A Sbjct: 187 TLSLIAALLGIYASFLSGSRGGWIFLP-IAIIYLAFSNRQFISKKIAIFSIVVLGTAVFS 245 Query: 256 IIFNKPIQNRYNEALNDLNSYTNA-NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 + N I+ R NEA ++ Y + +SLG R +++ + + P + R Sbjct: 246 LSQNTEIETRLNEATQEIVQYQKGHDENSSLGVRFELWKSAIYTTEQHPIFGSGYQGREV 305 Query: 315 SMNLLVAEHNRLRGAL-EFSNVHLHNEIIEAGSLKGLMGIFSTLFLY---FSLFYIAYK- 369 + + E+ + H HN+ +E S++G++G+ + L ++ +F ++ Sbjct: 306 LREKWAHDGLVNAQVIKEYLHSHSHNQFLEDLSVRGVIGLTALLAIFIIPLGIFITNHRI 365 Query: 370 -----KRALGLLILTLGIVGIG--LSDVIIWARSIPIIIISAIVLLL 409 ++ + I+ IG LS + S I V+LL Sbjct: 366 ANSPQQKMINQCGAISVIMMIGYCLSQAMFRHNSGIIFYSLITVILL 412 >UniRef50_B9BDB2 Putative membrane protein n=3 Tax=Burkholderia multivorans RepID=B9BDB2_9BURK Length = 356 Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 47/283 (16%), Positives = 97/283 (34%), Gaps = 10/283 (3%) Query: 97 SPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYI--- 153 S FR + + + + + + L + + L + +I ++ Sbjct: 16 SAFRGKFAAPMFDSPSRFAAAIPILLLVVH-YRFSVGRWLQYTIPIGLVITFVQLHFFEG 74 Query: 154 NSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP---FLFLLNSCAVLYVLA 210 + DR++ M +G++S +I K+ P + Y+ Sbjct: 75 PHFWDGDRMATYFADPLTFGQYMMTLGLMSLASINLFGKDRPPLIAFKCAAAALGFYLSI 134 Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEAL 270 + +R L PI+ + + + + + ++A+L F++ +++R + A Sbjct: 135 RSGSRTGWLAMPIVIAYLALPRRRQLRARNVALALGVVAVLLVSSYEFSQTVRDRIDAAQ 194 Query: 271 NDLNSYTNAN--SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG 328 D SY + TS G R+ IG + P ++ Sbjct: 195 QDYASYHFSGIAPDTSAGLRITFLRIGTYLAATHPLGGLGDTGFESALKAPELAAFASPY 254 Query: 329 ALEF-SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 A F + HNE++ G+ GI STL L+ I + Sbjct: 255 ARSFALHAGFHNELMTNAVRSGIWGILSTLALFIVPMVIFVRA 297 >UniRef50_A6FBF0 Putative O-antigen ligase n=1 Tax=Moritella sp. PE36 RepID=A6FBF0_9GAMM Length = 386 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 100/267 (37%), Gaps = 5/267 (1%) Query: 127 QLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA 186 ++ K + + + S ++ Y++ + R+ + + A ++ + + Sbjct: 99 RILLSKYHLKWLVALGSTVVLSSTYYLSEYLQIHRVDWPLNAIPHATIGAVIAIVTLVLL 158 Query: 187 ILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 + + + L + L + QTR L I + L + +++ Sbjct: 159 LDEKNNRNKMMLSLCFSLSIAALLINQTRGIWLSVVIAAILILFLKVKIKHINWRYTLI- 217 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 + IL+ V + IQ R ++ ++ + + +S+G RL ++ I + + P Sbjct: 218 TLVILSIGVYVAKPQIQQRIDKTSTEIVQIKSGDFTSSIGIRLELWMISPEVIAERPILG 277 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 + E +N +VA + +EF H HN+ I+ G++ + L L Sbjct: 278 HGNGDQ-EKLNEIVARGGVYKRLVEF--KHYHNQYIDRLVSGGIVSLILLLALLTYPLLF 334 Query: 367 AYKKRALGL-LILTLGIVGIGLSDVII 392 + + +++ GL+DV Sbjct: 335 LLPGVNQQIGIGISIVYATAGLTDVPF 361 >UniRef50_B2SL57 O-Antigen Polymerase family n=11 Tax=Xanthomonadaceae RepID=B2SL57_XANOP Length = 425 Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 105/284 (36%), Gaps = 16/284 (5%) Query: 146 IAGYAMYINSIHENDRISFGVGTATGAAYSTML--IGIVSGVAILYTKKNHPFLFLL-NS 202 A ++ + ++ G G A G + + I ++ V ++ + + +LL + Sbjct: 130 GALVGVFAAMLIALLQVMNGAGRAEGFTNAIVFADIALMLLVVGVFCRPDGNVRWLLGAA 189 Query: 203 CAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI-IFNKP 261 A + V+ L+ +R LL + +S + + + + + + + Sbjct: 190 IATVVVIVLSGSRGVLLSLLATLGVLIWGAPWRSARVRLLTFIGGPVLAVGVALSVPALT 249 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 Q R E +DL Y ++ +S GAR+ + + P + ++M+ L A Sbjct: 250 DQMRLGELQSDLQRYEVGDTDSSAGARIERLHVAWDTLKAHPLTGVGVGRFDDAMHDLPA 309 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI-----------AYKK 370 H HN++ E + +G+ G+ + +Y ++ ++ Sbjct: 310 C-AADPSLFRCQLGHAHNDLAEWSATQGVPGLLLLIAVYGVPLWVFARLHRRSGQQQFRG 368 Query: 371 RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 A ++L + GL+ + + + + +L+ + R Sbjct: 369 PAAAGVMLVISYALCGLTQSMFAHQVAASFYTAMVGVLVGLAAR 412 >UniRef50_Q0FYD9 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYD9_9RHIZ Length = 431 Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 82/214 (38%), Gaps = 21/214 (9%) Query: 209 LALTQTRATLLLFPIICVAALIA--------YYNKSPKKFTSSIVLLIAILASIVIIFNK 260 + +T R PI+ + + + +I + + ++ + Sbjct: 202 VVMTGMRGAWPALPIVLAIVVWVRWRDLPDVWARVEKRHRVWAIGAALLLTLVGAVLGAE 261 Query: 261 PIQNRYNEALNDLNS-YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 I R + + D+ + + ++++ +S+G R MY G+ ++ P ++ Sbjct: 262 YIGYRTQKLIEDVQALFLSSDANSSVGLRAEMYRAGIAALLERPLLGWGESGVWPAL--- 318 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG----- 374 A FS HLHN I+ G G++GI + + + + + AY++R Sbjct: 319 -EPRLGAAFADGFSYSHLHNMILTVGVQAGVLGILALIAVLITPVWCAYRQRNRAEGRAR 377 Query: 375 ---LLILTLGIVGIGLSDVIIWARSIPIIIISAI 405 LIL GL++++ + + + +I Sbjct: 378 LAFALILVCAYAIPGLTNIMFFHDILDGVWALSI 411 >UniRef50_Q2L1I7 Putative O-antigen polymerase n=1 Tax=Bordetella avium 197N RepID=Q2L1I7_BORA1 Length = 420 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 51/321 (15%), Positives = 113/321 (35%), Gaps = 17/321 (5%) Query: 113 FIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGA 172 G ++ L + + + VL+ + ++ + + H ++R A Sbjct: 90 LALGMPLLLAGLQATGPQRLKHVLWGTLAAGWVAIVSLIALIGTHLSERPLTPEYNAVSY 149 Query: 173 AYSTMLIGIVSGVAILYTKKNHPF----LFLLNSCAVLYVLALTQTRATLLLFPIICVAA 228 +L G+++ ++ + + LL + +TQTR+ L PI A Sbjct: 150 GNLLLLFGVINLFSLSWPLTRYRRSEIAFKLLTTLVTFAGFIITQTRSGWLALPIFVALA 209 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN-SVTSLGA 287 L+ Y + ++++ V + + R L +S+ Sbjct: 210 LLVYARFRHPLRLFAALIVVLAGLIAVGSLSPALVKRVELGRQQLTECEANPLVNSSICV 269 Query: 288 RLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSL 347 RL ++ + + +P A + ++ + AE E HN++++A +L Sbjct: 270 RLQLWRAAWGMMLDNPIKGVGASGFSPALQKMAAEGKVSPYVAE-DFGEPHNDMLDALAL 328 Query: 348 KGLMGIFSTLFLYFSLFYIAYKKRALGL-----------LILTLGIVGIGLSDVIIWARS 396 G+ G + L LY ++ A L +LG GL++++ Sbjct: 329 YGIPGGLALLLLYAIPAVFFLRRLAYDLPQQVRAAAAMGASTSLGFAAFGLTELMFRGMR 388 Query: 397 IPIIIISAIVLLLVINNRNNT 417 + + I L V+++ N Sbjct: 389 TLGLYVILIALFAVLSSAANG 409 >UniRef50_C9PJM0 O-antigen ligase n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PJM0_VIBFU Length = 407 Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 113/296 (38%), Gaps = 10/296 (3%) Query: 119 IVFLTLTSQLKSKKESVLYTLYSL-SFLIAGYAMYINSIHENDRISFGVGTATGAAYSTM 177 + + L + + +L L I ++Y + IH +R + A+ + + Sbjct: 99 LSLIALYFPFQRIQPIYYQSLVVLGCCTIFSNSLYFSVIHGFNREFGVINPIPYASIAAL 158 Query: 178 LIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP 237 L + + +F S + L LT++R L F + A + Sbjct: 159 LALLALHFSFGAQTTKGKVIFAGASLFPIISLILTESRGVWLAF----ICAFLMLSWGLF 214 Query: 238 KKFTSSIVLLIAILASIVIIFNKP-IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGL 296 K I+ + ++AS++ + + I+ R + + N TS+G R M+E L Sbjct: 215 KFTIKKIIFVSVLVASLITLLSGSFIEQRIEKTQYEFEQIQQGNMNTSIGLRFQMWEASL 274 Query: 297 NIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFST 356 + + + L +H + + H HN+ I++ GL+G+F Sbjct: 275 KLADNNWLVGLGTDHFD-KFEQLYTQHQITKALYDLHPPHYHNQFIDSVVKSGLIGLFFL 333 Query: 357 LFLYFSLFYI---AYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 L L Y+ A K+ +L + V +GL+D + I+ + +++L+ Sbjct: 334 LLLLLLPLYLVRHADKRTKNIVLSVVALYVVMGLTDAPFYNGQTFILYVLTMLILI 389 >UniRef50_Q1ZGS6 Putative O-antigen ligase n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGS6_9GAMM Length = 413 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 99/279 (35%), Gaps = 5/279 (1%) Query: 130 SKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILY 189 +S+ Y L++ + I +Y I +R + V A + + I Sbjct: 119 FNLKSLQYLLFAGAVNITAIIVYYQIIEPTNRFDWPVNAIPLATIAAFFSISSLTMLINN 178 Query: 190 TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIA 249 K H + ++ Y LT++R ++ II + Y +S K + + + Sbjct: 179 IKNKHKAILWISLILSTYATLLTESRGPIIALIIILGLSGYYYLLRSKKLIVKVMAIALV 238 Query: 250 ILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSA 309 ++ + + R + +N++ + TS+G RL MY++G + + P Sbjct: 239 VVIG-FLSVKPYMSARITQTINEVKHLEKGDFSTSIGLRLQMYQLGWTLIKEKPILGYGK 297 Query: 310 ESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 + +N L+ + + HN IE G++G + L+ Y+ K Sbjct: 298 TLQP-KLNDLLDKKQITPSVHRVVSWTFHNNFIEKQVNSGILGSLLLMSLFIYPIYLTKK 356 Query: 370 KRALGLLIL---TLGIVGIGLSDVIIWARSIPIIIISAI 405 + ++ +L D II + I Sbjct: 357 HSPVIKCLVINISLLYFLCSFVDTPFTTGQSLIIYLIMI 395 >UniRef50_Q11IK5 O-antigen polymerase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11IK5_MESSB Length = 426 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 62/407 (15%), Positives = 145/407 (35%), Gaps = 33/407 (8%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 +L ++ V + ++ A + + + R ++ G + Sbjct: 21 VLLSIAVACLVVKVKLDVLLFGFFAGIGIYLITGMHRSIRSIDPVYATGACLYA-GCAIV 79 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 I + Y YL G ++ L + + ++ L +F + Sbjct: 80 IGLIHGNLPEEIRWIGYPLYLLLGITLFPGVVLIKDPLRQIVLGARAGLILALVVGAFEM 139 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVL 206 G RI G G A A+ +++G++S + + + P L A L Sbjct: 140 VG---------GLVRIGLG-GNAANTAFVIVVVGVLSRMPVRNPPRFLPNSRLWFYLAAL 189 Query: 207 YVLALTQTRATLLLFPIICVAALIAYYNK--------SPKKFTSSIVLLIAILASIVIIF 258 + +T TR+ L +F + + L A + S + +++ L +I Sbjct: 190 -AVIMTGTRSVLPVFALGLLFDLFAMRRQLANGALRMSLRSAAVVMLVFFLGLGAIGYEL 248 Query: 259 NKPIQNRYNEALNDLNSYTNANSV-----TSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 I NR + +++S T L RL +++ + + P + Sbjct: 249 AGSIANRVDYTFAEIDSTMQNPGEEDAPLTGLEIRLTLWQKAIEVIRSHPLIGSGGD--- 305 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL 373 SM ++ + + A +H+HN +++ ++G++G+ L + ++ + + Sbjct: 306 ASMREIIRSTPQEQRATFSPYIHVHNFVLDELRVRGIIGLVVMLGFFLAVCWRLWASGLP 365 Query: 374 ----GLLILTLGIVGIG-LSDVIIWARSIPIIIISAIVLLLVINNRN 415 ++ ++ G L +++ R++ +I I + LLL + Sbjct: 366 EIREATVLFFASLLTYGALHGLLLADRNMALIAIFLVSLLLYLKKEA 412 >UniRef50_A1HMD6 O-antigen polymerase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMD6_9FIRM Length = 408 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 70/379 (18%), Positives = 139/379 (36%), Gaps = 32/379 (8%) Query: 20 ILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF 79 I+E I Y L +A + + S + ++ ++ ++ K L+ + F Sbjct: 23 IIEKIIYFLLIAYAAVATISISASNIVISLALVLAIIHYAKYPTTNLGIDKGLLKAILFF 82 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 L + + F H+ TA +F+ SFI + K + +L L Sbjct: 83 LFAM--FVSAVFAYNPALGFPEIGHTAYRTAPLFLASSFI-------KDKRQLWIILLVL 133 Query: 140 YSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFL 199 + + YA+++ G A Y LI ++ + I FL Sbjct: 134 IAAFTVNNFYAIWLGVNGNLRASGIRGGPMILAGYLVQLIPLIFILFINNICNTKDRRFL 193 Query: 200 -LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIF 258 L L TR + + A I ++ K +++ LI ++ S+ Sbjct: 194 GLAIFIAFLALLFNGTRGAWIAVAAVLFAYAILQVRRNTKLSLVALLFLIVLIISLF--S 251 Query: 259 NKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNL 318 N+ +R + D+ +NS RL M++ ++F+ P + + + + Sbjct: 252 NQMFYDRVK-TITDITF--QSNSE-----RLLMWQSAWHMFLDHPLTGVGTGNYGDLYQI 303 Query: 319 LVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR------- 371 A E H HN + + GL+G + +++ + + AY K Sbjct: 304 ----KYISPQAQEPFQRHAHNNFFQVLAEYGLIGFIAFSYMFGYILFNAYVKLRDNQNNI 359 Query: 372 -ALGLLILTLGIVGIGLSD 389 AL +++TLG++ GL++ Sbjct: 360 WALAAILVTLGLLVQGLTE 378 >UniRef50_A4BIW8 RfaL protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIW8_9GAMM Length = 381 Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 104/275 (37%), Gaps = 18/275 (6%) Query: 127 QLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA 186 + + ++ + + Y +++ R + T A L V + Sbjct: 61 RYGFNRHWLIAGMGVAVVIALFYMVFLTLD-GQSRPKVNMNQITSANLMVYLGFAVVAFS 119 Query: 187 ILYTKKNHPFLFLLNSCAVLYVLAL-----TQTRATLLLFPIICVAALIAYYNKSPKKFT 241 +++ ++ + L + + AL +++R L P ++L + + Sbjct: 120 MVHVFEHKGSRWWLVVGGSVLLAALIAAVLSKSRGAWLSVPFFVGSSLWLFRQHFKRWQL 179 Query: 242 SSIVLLIAI-LASIVIIFNKPIQNRYNEALNDLNSYTNANSVT-SLGARLAMYEIGLNIF 299 +IVL+ + ++ + P+ R E ++D N Y VT S+ RL M+E + F Sbjct: 180 VAIVLVTVLGGLTVAYLPGSPVLPRIQEGISDANRYFTTGEVTRSIDTRLNMWETAIEAF 239 Query: 300 IKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFL 359 +P S + + E + ++ H H++ + + +GL+G+ Sbjct: 240 KLNPLFGLS----EKGLQKFEREGGVAKYLEKYG--HQHSDFFDILAKRGLVGLAFFYGF 293 Query: 360 YFSLFYIAYKKRALGL----LILTLGIVGIGLSDV 390 + F+ + G ++L +G + GL++ Sbjct: 294 WAVFFWAFNGYTSPGYREAGILLGVGYLVFGLTET 328 >UniRef50_A9IHC6 LPS ligase-like protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IHC6_BORPD Length = 403 Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 108/336 (32%), Gaps = 25/336 (7%) Query: 102 TYHSYLNTA---KIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHE 158 YH + A + + + L + + A + + Sbjct: 59 AYHGQFSGAGLERAIRAAAMLPMTWLLLYSRPATLRHIQWGLLAGGATAAWLLLFPQFLA 118 Query: 159 NDRISFGVGTA---TGAAYSTMLIGIVSGVAILYTKKNHPF----LFLLNSCAVLYVLAL 211 R T T+L +++ ++I + L L L Sbjct: 119 GSRPKTSAYTPYNTVTFGNLTLLFAVMAWLSIGWQLTRWRRAEIALKLGVGGLTLAGFIA 178 Query: 212 TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALN 271 ++TR+ L P+ + + YN+ P + V + + VI+ N + R + Sbjct: 179 SETRSGWLAIPVFLLIGVCV-YNRVPWSRRLAAVGVAVAVGCGVIVANDALNARVEAGVR 237 Query: 272 DLNSYT-NANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGAL 330 + TS+ R+ + + ++ SP +++ + + Sbjct: 238 QWKECQVHELRNTSICVRVQLARAAIEMWKTSPLFGVGERGFEPALDAQQKRG-VVSADV 296 Query: 331 EFSNVHLHNEIIEAGSLKGLMGI-FSTLFLYFSLFYI----------AYKKRALGLLILT 379 + HN+++ + G +G+ F L +Y + A + A L + Sbjct: 297 ARTFGETHNDMLYVLAQYGAVGLLFGLLVIYLLPAWYFARRLGHDDRAIRTAAAMGLSIC 356 Query: 380 LGIVGIGLSDVIIWA-RSIPIIIISAIVLLLVINNR 414 LG GL++++ R++ I V+L + R Sbjct: 357 LGFAIFGLTELMFRGMRTVSFYAIWVSVMLALTYPR 392 >UniRef50_UPI00016A36CB O-antigen polymerase n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A36CB Length = 409 Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 99/289 (34%), Gaps = 2/289 (0%) Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR 161 +Y ++I + + + + ++ V+ + L ++ R Sbjct: 75 IAKAYDAPSRILLSIAVLFYFRYKRIDFARLIGVVAPVALLILVVQVKLDPHAMAIWGGR 134 Query: 162 ISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF-LFLLNSCAVLYVLALTQTRATLLL 220 + +++ + S I + L ++ A LY++ +QTR LL Sbjct: 135 FATYFVDTDMFGVYALILAMFSLFGIEPGQSRPARALSIVGIVAGLYLVVGSQTRTAYLL 194 Query: 221 FPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNA- 279 PI L+ K ++ L +IV+ + R ++L+ + N Sbjct: 195 IPIAAALWLVLKRPSISAKHFVALAALGIATIAIVLSLHDDTSTRVASIYHELDMWLNGS 254 Query: 280 NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHN 339 N TS G RL M+ + +F++SP+ + + A + HN Sbjct: 255 NRDTSGGLRLTMWHMAWELFLQSPWHGYGDTGFRAYLGEPGITAFASQIARQIIFAGPHN 314 Query: 340 EIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLS 388 E++ G+ G + + L+ ++ R +G+ + Sbjct: 315 ELLANMLRSGIAGAVAVVALFAVPIATFWRARRYSPRARIAADMGLSFT 363 >UniRef50_A1W2G4 O-antigen polymerase n=3 Tax=Acidovorax RepID=A1W2G4_ACISJ Length = 435 Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 97/278 (34%), Gaps = 7/278 (2%) Query: 105 SYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISF 164 + +K ++F++ + + L + + ++A + +Y+ + Sbjct: 88 GWDRPSKFAFGIVCLLFVSTAAPKPRAQFWGLLVGCAGAGVVALWQVYVENSPRASGFPT 147 Query: 165 GVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAV----LYVLALTQTRATLLL 220 G A +L+G + V L +++ + +C L L+Q+R L Sbjct: 148 GRTNAIQWGNLALLMGTMLAVQTLALREHLSRRAVAMACVGGLLALNASVLSQSRGGWLA 207 Query: 221 FPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY-TNA 279 + L ++ ++ + L + +K + R+N ++ Y + Sbjct: 208 LLMATPVGLYFLWHFYRRELWRMLAGTTIALVVLGAANHKVLAERWNVMEKEVLIYGSER 267 Query: 280 NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHN 339 + TS+G RL + + ++ P VA LE+ ++ HN Sbjct: 268 AADTSVGQRLEHWRFAWEVGLEKPLLGWGMRGYLAEKEKRVAAGQYEPSILEY--IYTHN 325 Query: 340 EIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLI 377 E ++ GL+G+ L Y + + RA Sbjct: 326 EPLDMFIKAGLVGVLLLLLFYAVPLGMFWPTRARMAAY 363 >UniRef50_Q31FH0 O-antigen polymerase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FH0_THICR Length = 436 Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 99/270 (36%), Gaps = 7/270 (2%) Query: 128 LKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGV-GTATGAAYSTMLIGIVSGVA 186 LK + +L ++ ++ +I+ H R GV G ML G++ + Sbjct: 123 LKFRSIGLLASMLAIGAMISFAMTVYAISHGVPRGGGGVHGAPIIFGDLAMLYGVLLFIL 182 Query: 187 ILYTKKNHPFLFLLNSCA-VLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIV 245 +Y K F +L+ A + L+ +R ++ + + K + + Sbjct: 183 AVYFHKEKYFYWLMFFGALGVLSSLLSGSRGGWIVLFTLPFFLIPFLPKKYRARVSIMGG 242 Query: 246 LLIAILASIVIIFNKPIQNRYNEALNDLNSY--TNANSVTSLGARLAMYEIGLNIFIKSP 303 + + + + + + PI++R A +++ + SLG+RL + + F+ +P Sbjct: 243 VGFIFIITAMALLDNPIKSRVLLAFSEIQLILSDESYMGGSLGSRLEFWRLAWLAFLSNP 302 Query: 304 FSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSL 363 + LV + H HNE + S GL+GI F Sbjct: 303 INGIGVGEFYAFKLHLVELGKVPEHLARY--KHTHNEYLGILSGMGLLGILVYSAF-FVW 359 Query: 364 FYIAYKKRALGLLILTLGIVGIGLSDVIIW 393 + + + I + +G++ ++ + Sbjct: 360 LWKFFNQAIHSNFIHIKYLGILGIATIVCY 389 >UniRef50_C1SIP4 Lipid A core-O-antigen ligase-like enyme n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIP4_9BACT Length = 390 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 28/290 (9%) Query: 130 SKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAI-- 187 K L L++ L + +Y + DR+ + + LI I + + Sbjct: 96 RDKAGYLMWLFAGGILTTVFGLYEYFSGKVDRLQGFLTHSLTYGNVAALICITALGLLVM 155 Query: 188 -LYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 LY K L + L L L+ +R + I A ++ Y+ +V Sbjct: 156 KLYKNKKQLALTVATFLICLVGLVLSGSRGPIFSLLITGFALVVYRYH------LKGVVG 209 Query: 247 LIAILASIV--IIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF 304 I ++A I I + ++ R+ +++++ + +S+G RL ++E + PF Sbjct: 210 GIVLIALICGGIYADPQVRERFTVTIDNIH-----KTESSIGTRLVLWEAASEAIMLRPF 264 Query: 305 SFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 + + ++ + S H HN I+ L G G+F+ L +L Sbjct: 265 FGYGKGNFKDEVSKYI-------NVPTSSRAHAHNSYIQYTFLHGFFGLFALLGFIGTLM 317 Query: 365 YIAYKKRALGLLI-----LTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 + Y++ I + + + GL++ + + + +S + L L Sbjct: 318 WEIYRRSKCSPFIKVGMFVFVVFLLEGLTENNLSDSEVVMTCLSVVGLTL 367 >UniRef50_B7J3X6 O-antigen polymerase family protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J3X6_ACIF2 Length = 417 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 86/229 (37%), Gaps = 15/229 (6%) Query: 177 MLIGIVSGVAILYTKKNHPFLFLLN-------SCAVLYVLALTQTRATLLLFPIICVAAL 229 + + + +A+L+ + LL + A L L + R LLF I+ A+ Sbjct: 160 IFLSMTLTMALLWIAYDMRDRVLLPRWANAILAVAFLLQLGMGAGRTGQLLFVILMPLAV 219 Query: 230 IAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARL 289 + + + + L I + + +Q+R E L +L + + TS G R+ Sbjct: 220 WVLFRGQWRYWALGGIALTIIGMGM----SPIVQHRVQEGLQNLQVVSKGDYDTSWGLRV 275 Query: 290 AMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKG 349 M + L + + P + A M L H N + ++ G Sbjct: 276 LMAQGALYMGFQHPILGVGTGNYANEMAQLQKNHILPELPSPLIMSQPQNSYLLELAMLG 335 Query: 350 LMGIFSTLFLYFSLFYIAYKKRAL----GLLILTLGIVGIGLSDVIIWA 394 + G+ ++ +++ A++ +A+ +LI + SD +IW Sbjct: 336 IPGLLLLVWFLWAVTAPAWRLKAVPEGWFVLIYMAVFIAGSFSDTLIWG 384 >UniRef50_Q9ZM38 Putative n=15 Tax=Helicobacter RepID=Q9ZM38_HELPJ Length = 429 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 49/357 (13%), Positives = 131/357 (36%), Gaps = 15/357 (4%) Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 L++ +G+ I+ + F + +S LN + + G+ + + ++K ++ + Sbjct: 66 LTLAFLGVFLSIFPNMFNMYDSQTFRYNLFALNMSLTYACGALCLLFSSRLRIKLNQKVL 125 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 Y++ +F+ ++ R ++ I A+ + Sbjct: 126 FYSMAVANFINGLLSLVQKIYFNMPRAQGFSTVKEYVVLVSVSILGCYIYALYSQNQKEK 185 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 F L+ V+ L+ TR+ + F + +++++++ S + Sbjct: 186 LFFTLSVFVGFLVVILSATRSATIAFVATFLILSCFILYAKKSLKPLGYMVVVSLVLSAL 245 Query: 256 IIFNKPIQNR---------YNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 + + ++ R DL Y ++ +S+G RL ++ L + PF Sbjct: 246 YVGSNALKKRGAIKQSRVQNQTFEEDLKRYAKKDADSSIGWRLERWKEALTVLRLRPFFG 305 Query: 307 RSAESRAESMNLLVAEHNRLRG-ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFS--- 362 +A + + + +++ R L N+II + +G++G LF Sbjct: 306 MAASEKCQRLEEILSLSKSYRAKDLILCYERYDNQIIHVLATRGIIGFLIWLFFLLVIVK 365 Query: 363 LFYIAYKKRALGLLILTLGIVGIGLSDVII--WARSIPIIIISAIVLLLVINNRNNT 417 +F+ K+ +L + + + + + + I +V+++V ++ + Sbjct: 366 IFWSGIKQNSLISFFILITLAFYLIFGIGFDPFDFFITGSFFVGMVMMVVFLKKDKS 422 >UniRef50_A9AJI5 Putative O-antigen polymerase n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AJI5_BURM1 Length = 446 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 85/258 (32%), Gaps = 21/258 (8%) Query: 166 VGTATGAAYSTMLIG--IVSGVAILYTKKNHPFLF-LLNSCAVLYVLALTQTRATLLLFP 222 V T T Y +L G + S + L + + ++ + TR P Sbjct: 170 VDTDTFGVYGLVLTGFCLFSLRIAPNGGSKISAAWQLFGALVGIVLIIGSGTRTAWYAVP 229 Query: 223 IICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN-S 281 ++ L + ++ + ++A + + ++ I R ++++ + Sbjct: 230 VVFALWLWLNRRSARLRWLLVCIAVLAAVLVL----DREIAARLLSGYHEIHQWLVGTRR 285 Query: 282 VTSLGARLAMYEIGLNIFIKSPFSFRSAESR-AESMNLLVAEHNRLRGALEFSNVHLHNE 340 TS G RL M+ + +F P+ A +A + A+ + HNE Sbjct: 286 DTSAGLRLTMWHMSWELFKHRPWGGYGDTGYLAFLDQPWIASIAPISQAMAIEHG-PHNE 344 Query: 341 IIEAGSLKGLMGIFSTLF-LYFSLFYIAYK----------KRALGLLILTLGIVGIGLSD 389 ++ G+ G + L L + A + LGL+ + IV + Sbjct: 345 LLANLLRSGVGGGVAVLCQFLIPLMFFARRCYAADDAVKEASRLGLIYIVCVIVMSVGFE 404 Query: 390 VIIWARSIPIIIISAIVL 407 + + + L Sbjct: 405 MFTLKYTASFYGLVIACL 422 >UniRef50_B2IAL7 O-antigen polymerase n=7 Tax=Xylella fastidiosa RepID=B2IAL7_XYLF2 Length = 409 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 106/285 (37%), Gaps = 18/285 (6%) Query: 146 IAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAV 205 A ++ + +I G A G + +L + + I+ +LL S + Sbjct: 119 GAALGVFGVLLLAVIQILRGETRAEGWVNAIVLADVTMALTIVVVFARPKQSWLLPSLVL 178 Query: 206 LYV---LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI-IFNKP 261 L + L+ +R LL ++ + ++ S + + L+ ++ + + Sbjct: 179 LACSAVIVLSGSRGVLLAMAVVLLVLTMSVRWASLRVRLLLLAGLVLGGGALALEVPQVT 238 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL-V 320 Q R E D+ + +S +S GARL ++ F+ P +M LL V Sbjct: 239 EQMRLVEFQADIRRLESGDSDSSTGARLERLQVAYATFLSKPLMGVGIGQFDRAMTLLPV 298 Query: 321 AEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI-----------AYK 369 + H HN++ E + +G+ G+ + L +Y F + +++ Sbjct: 299 CRGDEWLVRCHLR--HAHNDLAEWAATQGVPGLLAILAIYGVPFVLLLRLYAAGGRKSFR 356 Query: 370 KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 A ++L + + G++ + + A+ + + + R Sbjct: 357 GPAATGVMLVVSYMLCGMTQSMFSHQMSTSFYAVAVGVCIGLALR 401 >UniRef50_C9QDI3 O-antigen ligase n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QDI3_VIBOR Length = 399 Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 55/338 (16%), Positives = 124/338 (36%), Gaps = 11/338 (3%) Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVL-YTLYSLSFL 145 W ++ Y Y ++ ++FL LT+ +S + + L+ S Sbjct: 64 FWVKLLFINGLFGALAYEVYGFDSRELRATLVMLFLFLTTPKNFYTKSAMQWLLFIASIS 123 Query: 146 IAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAV 205 + Y+ Y R + + A ++ G+ + ++ + + ++ Sbjct: 124 CSSYSYYYQINVSLFRGEWPINAIPFATICGLVSISSLGLLLTRFEEKNTIVLIVAVTLS 183 Query: 206 LYVLALTQTRATLLLFPIICVAALIA-YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQN 264 + L L+Q+R L+ ++ L+ Y K+ +++ L+ + + + IQ+ Sbjct: 184 MAGLLLSQSRGPLIALIVVVFLLLLYVSYRKNWALCVLTLLCLVVGVGGLFKL--PVIQD 241 Query: 265 RYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHN 324 R + + + + +S+G RL M IG+ ++ ++P + + E L E Sbjct: 242 RIERTIQEYHLIEQGHLNSSIGVRLQMVGIGIELWQRNPMLGYGKDIKIEFDK-LEYEKR 300 Query: 325 RLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY----IAYKKRALGLLILTL 380 ++ HN ++ L GL+G L F + ++ A+ L L Sbjct: 301 ITPSLNRLISMTFHNGYVDKFVLYGLLGGLIFLTFLFYPIWKARQYTIERGAVLLWAPAL 360 Query: 381 GIVGIGLSDVIIWARSIPIIIISAI--VLLLVINNRNN 416 + SD I + I V +++ N + Sbjct: 361 FVAICNFSDAPFINSQAAIYYMFIIGSVTMILSNEKER 398 >UniRef50_C4V160 O-antigen polymerase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V160_9FIRM Length = 401 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 99/278 (35%), Gaps = 22/278 (7%) Query: 120 VFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRIS-FGVGTATGAAYSTML 178 ++ L + ++ + ++SF+I A+ I N R F GA S + Sbjct: 109 LYAVLLMVREKRRLLWIGICIAVSFIINDCAIVFQGIQGNFRAGGFAFSMVAGATLSMFI 168 Query: 179 IGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPK 238 ++ + Y+ + L TR + PI+ + + K Sbjct: 169 PVLLIFLHEKYSDRRWRAAVSAVLILSGAALLYNGTRGAWVAVPIVSFVCAVFMIRQKKK 228 Query: 239 KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNI 298 F ++++L A+ + + R L S T+ N T+ R+ +++ ++ Sbjct: 229 LFAGAVLILAVFSAA--FALSPTLSAR-------LVSITDINVQTNW-ERILLWKSACHM 278 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 F P L GA E H H+ ++ + G +G+ + LF Sbjct: 279 FQDHPMFGVGFGCFERQYQETY----ILPGAKEPQLFHAHSNVMNTLAECGAIGLGALLF 334 Query: 359 LYFSLFYIAYKK-------RALGLLILTLGIVGIGLSD 389 + L ++ AL L + LG++ GL++ Sbjct: 335 FWCVLITYGFRTWLATHNIAALILSAVLLGLILQGLTN 372 >UniRef50_A9CZZ0 RfaL protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CZZ0_9RHIZ Length = 404 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 68/415 (16%), Positives = 155/415 (37%), Gaps = 40/415 (9%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGR------QENYNIKNLILPLSIFL 80 IL FS+ + + AI+ L L+ R + + + K ++ ++ Sbjct: 3 ILMMFSLAASLSMPDAYTIAGALFAIIGLFYLLKRMHARASLFEPHLSGKLCLIFMAYAF 62 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 I L +W+ A + Y Y+ F++ IV L ++ + + L Sbjct: 63 ICALIQLWHRAP-------ISHYEMYMP----FLWAPLIVLAVLDGRIDRRFIWLGCLLG 111 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA-----ILYTKKNHP 195 ++ L A++ + +R +G+ + +L+G ++ + K Sbjct: 112 AV--LACFLALFQSIYLGAERPFGFLGSPITFGNNALLLGCIALAGRHDSPLNLRKPIWL 169 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA-YYNKSPKKFTSSIVLLIAILASI 254 L + + TQ++ L P++ + ++ ++ S + S V + Sbjct: 170 ALAYMGFFFGVVASLTTQSKGGWPLIPLVLIWVIVEDFWRASRQGRRSFFVAAFTFACLL 229 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNAN--SVTSLGARLAMYEIGLNIFIKSPFSFRSAESR 312 + +R A ++ S ARL ++ GL+I+ + P+ S E Sbjct: 230 PFMPLDTPLSRVKSAAIGTMAWFQTGEVVEGSADARLELWRFGLSIWPEKPWLGHSREGV 289 Query: 313 AESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK--- 369 + M+ +A++ + LHNE I+ + +GL+G+ S + ++ + + + Sbjct: 290 VQRMHEKIAQNEVDPWIKSLTG--LHNEPIQLLAEQGLVGLLSWVMMFAASILVFGRAYT 347 Query: 370 -----KRALGLLIL--TLGIVGIGLSDV-IIWARSIPIIIISAIVLLLVINNRNN 416 ++ LG L + GLSD+ ++ + I + + L ++ Sbjct: 348 EHSRVQKVLGQAGLITVAASLTFGLSDMNLMLNVNRQIFVFLVMALAALVVAERR 402 >UniRef50_A7BYU7 O-antigen polymerase n=1 Tax=Beggiatoa sp. PS RepID=A7BYU7_9GAMM Length = 406 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 69/181 (38%), Gaps = 13/181 (7%) Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEAL 270 +++ R+ + ++ L+ Y + +L+AI++ + ++ R + Sbjct: 1 MSEGRSG---YLVLFCLILLFSYQIYHIRGLIIGSILLAIISVSAYESSDVLRQRVDRIS 57 Query: 271 NDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGAL 330 + +Y +TS+ RL Y L IF + P + S ++ L + Sbjct: 58 EGVENYQQGKVITSVELRLEFYRNSLAIFAQKPIFGHGSGSFSDEYQKLAEKQAIT---- 113 Query: 331 EFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY----KKRALGLLILTLGIVGIG 386 + HNE + GL+G+ L+L + ++ A K + L + I G Sbjct: 114 --MTTNPHNEYLMIAVQWGLVGVALFLYLLYVMWRTAIHHLPKLQKHQAQGLIVTIFVGG 171 Query: 387 L 387 L Sbjct: 172 L 172 >UniRef50_A3JEK5 Putative O-antigen ligase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JEK5_9ALTE Length = 346 Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 121/310 (39%), Gaps = 10/310 (3%) Query: 111 KIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTAT 170 + + + + + + ++ + ++ F+ ++ Y+++ + AT Sbjct: 34 RAVLVMAVYISFFWGVRFNDRVFELIALISAMGFITLTFSQYLSTGGRIGGFINPIPYAT 93 Query: 171 GAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLL-LFPIICVAAL 229 +L ++ + + F L V L +T+TR L+ +F + + Sbjct: 94 AVGSVAVLFLAMTLFSNRAFWQRGAFGVLFILLVV--SLFMTKTRGVLVPVFLVTGGLLV 151 Query: 230 IAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARL 289 + K+ S+V++ A++ I N +++R + N+ T N S+G RL Sbjct: 152 VLLMMNKSKRLLQSLVIVFALVGFAAIAGNVFLKDRLTQTYNEYGQMTEGNYDGSIGVRL 211 Query: 290 AMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKG 349 ++ + ++ P R +L +A + L F+ H HN+ I+ KG Sbjct: 212 QLWLTAGELIVQEPIIGHGKGYRDALESLYLAASMKESLYL-FNANHFHNQYIDTTVKKG 270 Query: 350 LMGIFSTLFLYFSLFYIAYKKRA-----LGLLILTLGIVGIGLSDV-IIWARSIPIIIIS 403 L+G + L L + +AY+ L + L G L+DV +I A +I + Sbjct: 271 LVGGLALLLLLGAGVQMAYRSPRAPWQWYSGLAVILVYGGSALTDVPLIHAHTIFLFFGI 330 Query: 404 AIVLLLVINN 413 ++ V Sbjct: 331 CFLISAVSAE 340 >UniRef50_A6SUC2 Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SUC2_JANMA Length = 431 Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 98/261 (37%), Gaps = 19/261 (7%) Query: 132 KESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTK 191 + +++ + +++ + N+ I + A+ A ++I + + + Sbjct: 124 RIKLIHAIAIACVFAFARTIFLIAQGANEDIRASL--ASNAIPWAVVISFYTCLLLPAAL 181 Query: 192 KNH-----PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKS-----PKKFT 241 L+L + + + +Q+R L+ P C+ +Y + ++ Sbjct: 182 SEQNSLLRRRLWLFSVGCGIGAILQSQSRGAFLVIPWCCLVYAWFWYKQYAQEGGFRRAL 241 Query: 242 SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNA-NSVTSLGARLAMYEIGLNIFI 300 +V + I+ + I R + A+ D+ + N TS+GARL ++ + L+ Sbjct: 242 LMLVGAVTIVLATSWFMPGDIL-RMHRAVQDIEEAQTSENYNTSMGARLYLWCMALDGIR 300 Query: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV----HLHNEIIEAGSLKGLMGIFST 356 +SP+ + R + E + + V H+HNE + GL+ + S Sbjct: 301 ESPWIGIGSVERMRRIKH-AGEGESIEQVAKLQEVRALGHVHNEYLHNALDGGLILLASF 359 Query: 357 LFLYFSLFYIAYKKRALGLLI 377 + L + + R + + Sbjct: 360 MALLIGMATAIFYLRRVAPVA 380 >UniRef50_UPI0001BCF229 O-antigen polymerase n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCF229 Length = 312 Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 81/235 (34%), Gaps = 26/235 (11%) Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 A++ M I ++ + K+ L + +L LTQTR L Sbjct: 43 ASHLLMAIPVLCFFSQQSYMKHFQRPLLALALLSGVLLLLTQTRGAWLAAAGTSALLFAL 102 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 ++++ +L S VI+F+ +R + S R+ M Sbjct: 103 TPQLRRVLLAAALIGT--LLLSAVILFSPTYSSRLISI--------SDTGYASNQERIYM 152 Query: 292 YEIGLNIFIKSPFSFRSAESRA-----ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGS 346 ++ L+IF P + + E R + H HN ++ S Sbjct: 153 WQAALDIFRDHPILGVGMDEYGYYYNTAYIPDAARERPRDPDDPSTGHGHPHNNFLKHLS 212 Query: 347 LKGLMGIFSTLFLYFSLFYIAYKK-----------RALGLLILTLGIVGIGLSDV 390 G+ G + L L+ LFY Y++ AL +++ GI GL+D Sbjct: 213 EGGIFGAVAFLLLHGYLFYRLYQQFHEERRQRTPAYALMGILVFAGIHLEGLTDT 267 >UniRef50_Q1N5A2 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N5A2_9GAMM Length = 443 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 124/348 (35%), Gaps = 12/348 (3%) Query: 26 YILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLIL-------PLSI 78 Y + F ++++ + + + IV + + L++ +S Sbjct: 20 YAVFFITLLVLPIVPKGIALLLLLVGIVGFAVYRGKLLIGFSPEERLLIWVFSAFTFISF 79 Query: 79 FLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYT 138 + S +++++ + + F + + + L Sbjct: 80 ISFLVFPYSRMSHYRMEDYATFMLILPMFLLLRQWRFKLNTIVVLFSFVATLLGVVSLLQ 139 Query: 139 LYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLF 198 L+S+ + + N + + GV A +++ + A+++ K+ + Sbjct: 140 LWSMQSGSGYFMTFDNPMAQFWNRPSGVVNPMRYAAISLIFFAFALNALVFVKRQSALIK 199 Query: 199 LLNSCAVLYVLA---LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 L A++ LTQ R L F + A++ +K + + I+ V Sbjct: 200 TLLFVAMISAGIACALTQVRGAWLAFFALVFTYGCAFFYLGYRKRVVAFFAVAIIVVVSV 259 Query: 256 IIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES 315 F ++ R ++ Y NS +SLGARL M++ + + P+ S + + Sbjct: 260 AQF-DFVEQRIHKTERAFEMYMEGNSGSSLGARLDMFKTAWWLINERPWFGHGLNSYSAN 318 Query: 316 MNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSL 363 + + + + HNEI+ A KG++G+ S L L+ + Sbjct: 319 ATEIRENTPGMNPEVG-RWHNPHNEILNATVEKGVIGLISMLLLFVAP 365 >UniRef50_Q01Z28 O-antigen polymerase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Z28_SOLUE Length = 405 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 46/315 (14%), Positives = 96/315 (30%), Gaps = 38/315 (12%) Query: 70 KNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLK 129 + LPL +FL+G +I + + Y ++F L S Sbjct: 51 PRIKLPLGLFLLG--TIISLAFSDNPAAGLPQIRKFY------VFLELLVIFSLLRSVEM 102 Query: 130 SKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGV------GTATGAAY--------- 174 + + + + G+ + + + E R+ TG Sbjct: 103 VRLLFLSWAGIGAVTAVRGFVQFASKVQEAHRLGRNFYDFYVGERITGFTSHWNTYSAEE 162 Query: 175 STMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYN 234 I +V+ + + +L+L+ +L + L +TR + + + + + Sbjct: 163 MFAFIMLVAFLLFAPGTRKRLWLWLICGALILIAIVLGETRGIWIALAVAGLYLVWFWKR 222 Query: 235 KSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEI 294 I L I + + Q R+ SV S R+ + Sbjct: 223 W------MVIAAPAVALLGIALAPSAM-QERFTSIF-------KPKSVDSNQFRVVTWRT 268 Query: 295 GLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIF 354 GL + P+ E V E + HLHN + + +G+ + Sbjct: 269 GLRMVKAHPWLGLGPEEPHLQFEKYVPEDIPRPLPSGW-YGHLHNIYLHYAAERGIPTML 327 Query: 355 STLFLYFSLFYIAYK 369 L++ + Y ++ Sbjct: 328 VLLWMLLQILYDFWR 342 >UniRef50_B3ELM8 O-antigen polymerase n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ELM8_CHLPB Length = 398 Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 66/378 (17%), Positives = 122/378 (32%), Gaps = 30/378 (7%) Query: 41 TFSIKIYNITAIVCLLSLILRGRQ-----ENYNIKNLILPLSIFLIGLLDLIWYSAFKVD 95 FS+ + NI A + L I RG K ++ L + L+W Sbjct: 24 PFSVAVGNIVAALITLLWIFRGNHKENWASLKGNKFVLATLCFVALYFAGLLWT------ 77 Query: 96 NSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINS 155 K + +F+ + + + + ++ +A+Y Sbjct: 78 ----LDIDSGIRTLQKESVLLLIPIFMLFIQKKHLHRYIFAFLISISCMVLLSFAIYYGI 133 Query: 156 IHENDRISFGVGTATGAAYSTMLIGIVSGVAILYT-------KKNHPFLFLLNSCAVLYV 208 I T + S ++ +L+ K + LF L Sbjct: 134 IPPLSGAKQSDPTPFMSHISYNPFLTIAIYLLLFLILFDDTQSKRNKILFSLVVLIFSIN 193 Query: 209 LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNE 268 + +T+ RA +F + + Y+NK KK +L+ ++ SI + NR N Sbjct: 194 MFITKGRAGQAMFFAMIFITTVQYFNKQRKKGLLVAAILVPLILSIAYSTSDNFSNRMNA 253 Query: 269 ALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG 328 + D+ Y N TS G RL E I +P A + ++ Sbjct: 254 IVGDVQKYQENNKKTSTGLRLVFAENSFEIIRNNPVFGVGTGDFAHEYEKINNKNTPELR 313 Query: 329 ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGI-VGIG- 386 E + HN + G++G+ S L L F ++ + L + + G Sbjct: 314 PTE----NPHNMYVLTTVQLGIIGLVSLLSLLFFQTQLSTSSKIDFQKKFGLTLPILFGI 369 Query: 387 --LSDVIIWARSIPIIII 402 LSD + ++ + Sbjct: 370 IMLSDSYLRGHYTTMLYV 387 >UniRef50_B5WDI1 O-antigen polymerase n=1 Tax=Burkholderia sp. H160 RepID=B5WDI1_9BURK Length = 460 Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 85/241 (35%), Gaps = 11/241 (4%) Query: 155 SIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCA----VLYVLA 210 S I+ G+ TA A + L + I T FL +++ V+ +L Sbjct: 177 SWVFKHHITQGLFTAFLAYMTLTLATMPRSSNISKTLSIPSFLRVISGTIAIVCVINLLV 236 Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQN----RY 266 + + R + + + + + + VL+ I + + + + R Sbjct: 237 MQEGRTGPAVLLPLLMLWSWQIFLREQRSHPGKTVLVFGIALAFGALAALYVAHNKTSRM 296 Query: 267 NEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 ++++ Y + TS+G RL Y + + K P S L A Sbjct: 297 ANVGSEIHEYEKNGASTSVGLRLEFYRRSIFLVSKRPVLGSGVGSIGPLFQDLAA---GR 353 Query: 327 RGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIG 386 +GA + + HNE + GL+G+ + + L + L+ + + ++ Sbjct: 354 QGAQGMISSNPHNEYLMISVQLGLVGLAAFVTLLWQLWREGLRTAGFEGAFVCGYVLIFA 413 Query: 387 L 387 + Sbjct: 414 V 414 >UniRef50_Q1Q4N8 Similar to lipid A core O-antigen ligase related enzyme n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4N8_9BACT Length = 437 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 70/435 (16%), Positives = 142/435 (32%), Gaps = 57/435 (13%) Query: 16 KSSMILEIITYILC--FFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLI 73 K+S I ++ Y FF + + +T + CL ++ ++ + L Sbjct: 4 KNSKISQVSEYAFITYFFILTFFPFGADVIKMMCLVTMVGCLAYQMVLEKRIIFEKTALN 63 Query: 74 LPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQL--KSK 131 +P+ +F I L +I K F H Y FI+F + + + + Sbjct: 64 IPILVFFIYL--IIASIFSKNTKYCFETLLHDY--------VPYFIIFFCMVNTIHSIEQ 113 Query: 132 KESVLYTLYSLSFLIAGYAMYINSIHENDR----ISFGVGTATGAAYSTMLIGIVSGVAI 187 + ++ + L+ Y +Y R I+ + A Y ++ + I + Sbjct: 114 VKRIIKAMLITCGLVCAYGLYGYYTGIAARDDRLIATFKYHSRIAKYISLFLPIAICLFF 173 Query: 188 LYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLL 247 Y F Y + LT +RA+ + + K ++ L Sbjct: 174 YYRSIFVRFWLGCLVFVSGYAIVLTMSRASWFANMVAVIYIAFMLKKKYLLIAIIAMCPL 233 Query: 248 IAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFR 307 + +L + +Y++ + S LG RL ++ + I + P Sbjct: 234 LFVLLPSKYSMHAKTITQYDKFFS---------SNKILGERLMCWKASIAIILDHPLLGI 284 Query: 308 SAESRA------ESMNLLVAEHNRLRGALEFSN------------VHLHNEIIEAGSLKG 349 R + + + G + H HN I+ G Sbjct: 285 GPGKRNFRDIYETYRKEIREKEKKSLGDIPAKTIKKKKVQKVESLSHAHNIILHMWVETG 344 Query: 350 LMGIFSTLFLYFSLFYIAYKK---------RALGLLILTLGIVGI---GLSDVIIWARSI 397 + G+ L+++ +FY K + L+ ++ G+V + GL+D+ Sbjct: 345 IFGLAIFLWMFTIIFYRTIKAIKSIAENRFEKMLLVGVSAGLVSLISHGLTDIFWKTPES 404 Query: 398 PIIIISAIVLLLVIN 412 + VL L+I Sbjct: 405 LFLWQVIGVLFLIIQ 419 >UniRef50_C9KNY6 Inorganic carbon transporter n=2 Tax=Veillonellaceae RepID=C9KNY6_9FIRM Length = 671 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 45/368 (12%), Positives = 113/368 (30%), Gaps = 46/368 (12%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 I + + + + + + + I ++ ++ +P ++ + + Sbjct: 32 IAWYGLLAEVFFLPLSPSVAT-VALLIGIAGTALRFYVDKEFHFRHLRFDVP-AVLFVAV 89 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 L S + F + Y+ Y + + + + + +S+L + + Sbjct: 90 SGL---SVLSSPDRGF-SFYNYYNLVGVYVLT---YLLIGQNVREPGQMKSILRMACAAA 142 Query: 144 FLIAGYAMYINS---------IHEND-------RISFGVGTATGAAYSTMLIGIVSGVAI 187 ++ Y Y + D R+ A +I ++ Sbjct: 143 VIVLLYGYYQFLFGIDISSMKWVDGDAFPELRKRVFSTWENPNILAGYLDIIICLAFGLF 202 Query: 188 LYTKKNHPFLFL-LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 + + + L A LA+T R L+ +I + + +++ Sbjct: 203 MKCRDRERRILLGAFMLAAAACLAMTYARGACLVIAVILAGYGVLRDRR--------VLV 254 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 ++ +I+ + + + R + TS RLA +E + + PF Sbjct: 255 ACILVVAILFVLDPMLYERITSVFTKV--------DTSTEMRLAFWESTVAMIQDHPFLG 306 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 + + L+GA VH HN + + G+ G + + +F + Sbjct: 307 IGWGAY---WMVYPEYDFYLQGA-NVLIVHAHNIYLNYMAEIGIPGAVAFFWFFFGTMIM 362 Query: 367 AYKKRALG 374 A + Sbjct: 363 ALRTHFPA 370 >UniRef50_B4SKH3 O-antigen polymerase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SKH3_STRM5 Length = 429 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 84/234 (35%), Gaps = 12/234 (5%) Query: 197 LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 L LL L TQTR LL P + L+ + + L++A ++ Sbjct: 190 LKLLTGILGLIAFLWTQTRGGLLAIPCFLLIGLLVMGRRLGRMKILLG-LVLAAGVGVMA 248 Query: 257 IFNKPIQNRYNEALNDLNSYTNAN-SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES 315 + +++R + +N+ + + + TS+ RL ++ + + P R Sbjct: 249 THDGALRDRIDAGVNEYGDCSADHLADTSVCIRLQLWTAAGYMIREQPVFGVGGGDRFRR 308 Query: 316 MNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTL-------FLYFSLFYIA- 367 +A ++ + HN+++ + G++G + ++ + Sbjct: 309 ELERLAAEGKVSAMVARDFGETHNDLLYFLATYGVLGGLGLVLVYLAPALVFLPRLWRGD 368 Query: 368 --YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 + A L + + G++++++ + + LLL ++ + Sbjct: 369 ERSRLHAAAGLSICVAFAVFGVTEMMLRDMRTASFYAAWVALLLALSEPRSGTQ 422 >UniRef50_Q5ZXB0 O-antigen biosynthesis protein n=4 Tax=Legionella pneumophila RepID=Q5ZXB0_LEGPH Length = 416 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 91/234 (38%), Gaps = 15/234 (6%) Query: 185 VAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSI 244 + + + + F+ LL S VL++ R L++ + L+ K K + Sbjct: 170 QSSGWLRLIYIFMILLTSYQVLFI---NTGRTGYLVY---FILMLLLLIQKLNFKQALAG 223 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF 304 ++L + + ++ + +Q R + + D+ N TS+G R+ + + +K PF Sbjct: 224 IVLFSGIIALAYHHSPVMQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMLKHPF 283 Query: 305 SFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 S + V E ++ H + + +GL+G+ + SLF Sbjct: 284 IGIGTGGFKYSYSQDV---PVPSWGKELTDPHS--QYWMTLAEQGLIGLVLLIIFLASLF 338 Query: 365 YIAY--KKRALGLLILTLGIVGIGLSDVIIWARSI--PIIIISAIVLLLVINNR 414 ++ LL + +SD I+ + ++++SA+ +I R Sbjct: 339 ITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAGYLLVVMSALCFGELIEKR 392 >UniRef50_Q1QWW2 O-antigen polymerase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWW2_CHRSD Length = 446 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 69/192 (35%), Gaps = 17/192 (8%) Query: 190 TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAY-----YNKSPKKFTSSI 244 ++ ++ + + L + + QTRA L ++ +I + + S+ Sbjct: 186 SRLPIILVWCVLTLISLAGVMIGQTRAVWLALSVVAFFGIIIWLMWLVKFHGARSMLRSV 245 Query: 245 VLLIAILASIVI----IFNKPIQNRYNEALNDLNSYTNAN----SVTSLGARLAMYEIGL 296 +++ +LA + + F + R + + + +S+G R+ + Sbjct: 246 TIVVCVLAVVFLGALYTFKDTLSKRVGYESDVIEKLIDGEFQQLPYSSIGIRIHTWVAAG 305 Query: 297 NIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFST 356 + P E R L++ + L ++ HLHN +E GL+G+ Sbjct: 306 EWIAERPLVGWGGEGRG----LVIDHTDWLPDDIKERFGHLHNFFLEVWVAYGLLGLGVI 361 Query: 357 LFLYFSLFYIAY 368 L F + + Sbjct: 362 AALAFWIGRGTW 373 >UniRef50_A1TYQ8 O-antigen polymerase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TYQ8_MARAV Length = 415 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 64/392 (16%), Positives = 149/392 (38%), Gaps = 27/392 (6%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILR---GRQENYNIKNLILPLS 77 L+ + I+ ++ + + + ++ + +V ++S + + + K L+ + Sbjct: 12 LKYLLLIVIGTFPALSVIVDGYGSALWYLLGLVGIVSFAISANVRERLCFEPKALLFVAT 71 Query: 78 IFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLY 137 FL + +I Y VD S F + + + I + L + + + +L Sbjct: 72 PFLFFVWSIIIYWL--VDPSDF-----AKSRVERHALLLISIPVIALLFHARFRSKDLLL 124 Query: 138 TLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL 197 + + GY + + D G+ A ++ I+ +L K H ++ Sbjct: 125 SFSLSGLVFLGYWIVHDGEGRLD----GLVHAIHFGNIALITLILCVGGLLTQSKRHWYV 180 Query: 198 FLLNSCAV-LYVLALTQTRATLLLFPIICVAA-LIAYYNKSPKKFTSSIVLLIAILASIV 255 L + +R L+ + +A ++ ++ + L+A A + Sbjct: 181 IAAAGSVGALIAFMESGSRGGLVALFLALLAVGFWFSVTRNQIRYFVITLALVASAAIVS 240 Query: 256 IIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES 315 + + PI RY L++L+ ++ TS+G RL M++ LN+ ++P Sbjct: 241 VKYVDPISERYELTLSELDKFSEGQLYTSMGMRLLMWDAALNVITEAPVIGSGFSGYRTE 300 Query: 316 MNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR---- 371 + ++E + +FS+ HN+ + + GL+G+F L + + R Sbjct: 301 ILTRISEGHLKPLMSDFSS-EPHNQYLYQLASHGLIGLFLLLLMLTLPLFYLATPRPGSH 359 Query: 372 ------ALGLLILTLGIVGIGLSDVIIWARSI 397 + L ++ L + GL+ + R + Sbjct: 360 RNHHILRVTLAVIFLSFIFFGLTITLFDQRRV 391 >UniRef50_C5T763 O-antigen polymerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T763_ACIDE Length = 303 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 86/260 (33%), Gaps = 20/260 (7%) Query: 138 TLYSLSFLIAGYAMYINSIHEN-----DRISFGVGTATGAAYS-----TMLIGIVSGVAI 187 T ++L+ L+ ++Y N + +GV Y + +V+ Sbjct: 2 TAFALAMLLVLASVYANIWFDLPWSKTHNQGWGVDHTVVGDYITQSLMMTFLVVVALDRG 61 Query: 188 LYTKKNHPFLFLLNSCAVLYVLA--LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIV 245 L L + + V L+ R +L V A + +++ + Sbjct: 62 LRAGAMWQRLAWWAAALLAAVSITHLSSGRTGYVL-LAAAVLAFSLLATQGWRRWMALCA 120 Query: 246 LLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFS 305 L ++ + + IQ R A+ + + ++ +TS+G R+ ++ + K P + Sbjct: 121 LAAGLVGVVWT--SATIQQRVQLAIAEART-SDRMEITSIGGRINFWKNTWELIEKRPLT 177 Query: 306 FRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY 365 S V F H HN+ + GL G+ L F+ + Sbjct: 178 GWGTGSYHVQWCHAVDA----PQWCVFGRWHPHNQFLFFWVEHGLAGLVLFGILVFAPLW 233 Query: 366 IAYKKRALGLLILTLGIVGI 385 A + R +L V Sbjct: 234 AARRARPPQQRLLVSFFVIF 253 >UniRef50_Q30PV6 O-antigen polymerase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30PV6_SULDN Length = 401 Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 10/250 (4%) Query: 146 IAGYAMYINSIHENDRISFGVGT-ATGAAYSTML----IGIVSGVAILYTKKNHPFLFLL 200 I Y M+ + + N+R S T YS L I ++S V ++L Sbjct: 124 ILAYGMFFDFWNINERDSSYPTPFMTHIHYSIYLAFTAILLLSRVFCKKLLLKEKLPYML 183 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 L + RA L F + + + Y + K S + I + Sbjct: 184 FFLLSTTNLMFSTGRAGQLAFFVALIVLIFLKYRITVKSVVMSFFSITVIFLLAYNSL-E 242 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 + R + + D+ + N S G R+A + + + + S ++ Sbjct: 243 LFKQRVDAGVKDVQNIAVQNYNNSFGIRVAFWLVAGEVLKEHSLLGNGIGDYKVSTKEIL 302 Query: 321 AE---HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG-LL 376 + + H HN+ + G +G+ L++ F + + R L + Sbjct: 303 GKKEFGLSDETKEFMTTQHFHNQYLMVAVQGGFIGLTLMFLLFYKFFTLRIEDRELKEIS 362 Query: 377 ILTLGIVGIG 386 +L ++ +G Sbjct: 363 VLGFVVIAVG 372 >UniRef50_B6BIX9 O-Antigen Polymerase family protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BIX9_9PROT Length = 410 Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 69/354 (19%), Positives = 132/354 (37%), Gaps = 16/354 (4%) Query: 70 KNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLK 129 K L+L + F L L+W F+ + + Y+ Y +F + Sbjct: 65 KPLLLIILFFAYSYLSLLWTDNFETAKTALK--YYKYYWIMIPVLFTTLTKEQAKNGLYV 122 Query: 130 SKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILY 189 Y L+S+ + ++ N+I I T M IG +S + I Y Sbjct: 123 FVLSIGGYALFSILIYLNVLHVFQNNISNPRGI-LSYSIVT----IYMAIGTLSSLLISY 177 Query: 190 TKKNHPF--LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLL 247 K++ +FL+ + L L + R+ L F I + L Y K+ I ++ Sbjct: 178 YSKSNALKTIFLIITFLSLIGLFINNGRSGQLSF-FITIFFLFIIYRKNILNIKILITII 236 Query: 248 IAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFR 307 I I S+ ++ + +++ +N+L N N S G R M+ G++I ++P Sbjct: 237 ILISTSLYLLNSFNKIDKFKYGINELKEVQNNNFSGSWGGRAYMWFAGIHIVKENPIFGT 296 Query: 308 SAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA 367 A + H L HN+ ++ + G++G F L Y Sbjct: 297 GAGDNIDEFINYTKTHPSDSTWLR----SFHNQHLDTLTRYGIIGYILLWSSVFLLLYYL 352 Query: 368 YKKRALGLLILTLGIVGI--GLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 + + + G+ D+++ + I + +LL ++ +N +IN Sbjct: 353 RDLELFFTIGIVFFSITFFSGIFDILLLMKPYNTIFMLIFLLLSIVVYKNKSIN 406 >UniRef50_A4G2D6 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2D6_HERAR Length = 402 Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 59/399 (14%), Positives = 136/399 (34%), Gaps = 36/399 (9%) Query: 33 MIIAFVDNTFSIKIYNITAIVCLLSLILRGRQ-----ENYNIKNLILPLSIFLIGLLDLI 87 + F I + ++ ++L+L G N L + L+ Sbjct: 19 LSFLPFTLFFPIGVGYAGMLLFFVALLLNGDYRGKWQTVKNSPMFWPTLGLLLVTCGA-- 76 Query: 88 WYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIA 147 F F + Y N ++V L S + + ++ + A Sbjct: 77 --GLFLTRPDGFWKAFMHYQN---------YLVLLLFISVGGGRWQQRALYVFFAGAVYA 125 Query: 148 GYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYT------KKNHPFLFLLN 201 Y+N + A ++LIGI+ G+A + +++ L + Sbjct: 126 ATLFYLNYFQLLPDWAIFQNYIQYAGNKSILIGILLGIAGGWMLNEIFSRRDGKLLMIAA 185 Query: 202 SC-AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 + +TR ++F I A++ + + + I L++A+ Sbjct: 186 FLYISFALFVFAKTRTGSIIF--ILGCAIVMLRYLTLSRRSLLIALVLALAMGGAWQNAH 243 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 + R + D+ ++ V++ G RL MY I +I ++ P + + Sbjct: 244 DFRERLTGTVQDVKAFMQGGQVSAEGIRLEMYRITGDIIMERPLGGHGIGTWVINYEERA 303 Query: 321 AEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK---KRALGLLI 377 A HN+ + + G++G+ + L+++ + +A + + L Sbjct: 304 KGLPSETMATP------HNDYLLYAAEIGILGVLALLWIWVTQLVVAVRVGGDAGVRLFT 357 Query: 378 LTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 + + I+ G+ + I+ I + + + L +R+ Sbjct: 358 IGVAIMFGGMVNAIMRDALFGIAFMLLLSIPLAGISRSR 396 >UniRef50_Q6MMF8 Putative O-antigen ligase WaaL n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MMF8_BDEBA Length = 419 Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 54/335 (16%), Positives = 116/335 (34%), Gaps = 29/335 (8%) Query: 66 NYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLT 125 N +IL L F G+ + +S + + + F S L Sbjct: 59 LKNKTLIILLLIYFFSGITGYVLHSPMQTNE---WVKISNLRWIWGFFACYSVGHILAAQ 115 Query: 126 SQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGV 185 + + + L L +I + + + + + A ++ + + + + Sbjct: 116 GKKRFDHRHFIVLLTVLLAIIVSHLNLTSGAFFSPGVRLQGFYSNPAFFAMAAVALWASL 175 Query: 186 --AILYTKKNHPFLFLLNSCAVLYVLAL-TQTRATLLLFPIICVAALIAYYNKSPKKFTS 242 ++Y L L V+ + T TR++ + + + L NK K Sbjct: 176 IPYLIYNHSKASGLGAAALLTCLTVILIATYTRSSWIAMVAVLIFTLFYTKNK---KAIL 232 Query: 243 SIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKS 302 ++ A+ V+ +++R + S S GAR+ ++ +IF+ Sbjct: 233 VAGFALSAAAAAVLFNLFQMKDRILQTF--------DFSGVSQGARIEIWNATWHIFLDH 284 Query: 303 PFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFS 362 P E ++ L + +L + + H HN+ ++ S G++G+ L ++ + Sbjct: 285 PIFGVGFE---YAVKLYKEYYIKLGQSTAYIPGHAHNQFLDVLSGAGIVGLIGYLGVFGA 341 Query: 363 LFYIAYKK---------RALGLLILTLGIVGIGLS 388 F +KK + L L L + G S Sbjct: 342 GFVFFHKKFKSATDILSKQLSLGSLLCIVALFGCS 376 >UniRef50_B2JE45 O-antigen polymerase n=2 Tax=Burkholderia RepID=B2JE45_BURP8 Length = 432 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 85/228 (37%), Gaps = 7/228 (3%) Query: 164 FGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPI 223 F A G + + ++ + ++ L+++ A++ VL + Q R ++ + Sbjct: 159 FKDHIAAGIMTALLFYLALNFAKHVRSRAAKAALYVVALLAIVNVLLMMQGRTGQIIAIL 218 Query: 224 ICVAALIAYYNKSPKKFT----SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNA 279 V ++ Y+ S V L+A+ ++V +R E +++++Y + Sbjct: 219 FIVIYVVTYFVSLRGMKLWVRWGSGVALVAVAGTLVYAALHSHGSRLAETNDEISAYETS 278 Query: 280 NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHN 339 N TS+G R+ Y L + + P + E + A + HN Sbjct: 279 NKNTSMGVRIVFYRRSLELIGERPVIGHGVGTVQEEFDAFARNATGAAAATAGNP---HN 335 Query: 340 EIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGL 387 E + G G +GI +F + A + R I+ + + Sbjct: 336 EFLLMGIQLGALGIALFVFFLVQIGRSALELREPARTIVLAYLFAFAI 383 >UniRef50_A9KDI8 O-antigen ligase n=6 Tax=Coxiella burnetii RepID=A9KDI8_COXBN Length = 436 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 120/360 (33%), Gaps = 30/360 (8%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 T +L + + T + ++ + ++ L S + + + + L +F+ + Sbjct: 23 TGVLLAATAFSVPLSTTATCILFPLATLLSLFSDPWYKKWRAISSHPVAIVLILFIALYV 82 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 +YS R +H + T+ + ++ + + + +++ Sbjct: 83 IAAFYSVAPN-----RDIFHQFSKTSN-LLCAVILIGFSCEPPWRRYILNAFLIAMTITL 136 Query: 145 LIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP--------- 195 ++ + N + FG + + +++ LY Sbjct: 137 GLSYIKYFFNPLLFFS-TPFGKSSVFKDHIIQNFLMVITAFIFLYRSLTPVAPTFKLRTP 195 Query: 196 -------FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI 248 +L A+ L + R+ +F + + Y+ + +++ Sbjct: 196 NKWLNRWIYGILAFVAIFNALFINDGRSGYFIFAALLFFSGGLYFGW---RGFLVALIMA 252 Query: 249 AILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRS 308 +L+ + F+ + R E + + Y + TS+G R+ + +F + P+ Sbjct: 253 VLLSGLAYHFSDQFRWRITELVQNTERYQKGEANTSVGIRIQSIKNAYFLFKQRPWLGHG 312 Query: 309 AESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY 368 + L E + G + S +N + G G++G+F L + + +Y Sbjct: 313 TGGFHTAYATLPPEKTQATGDMRLS----YNSYLNVGIELGIVGVFLLLMNFLIQWKYSY 368 >UniRef50_A6C2I1 Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2I1_9PLAN Length = 439 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 100/276 (36%), Gaps = 14/276 (5%) Query: 114 IFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGV---GTAT 170 I ++ ++ L + LIA + +I SI + R+ T Sbjct: 114 FLMMPIYLAFFIDPRARRRGIQMFELAMIITLIASLSCWIFSIDYSVRLMDNAIFKNRIT 173 Query: 171 GAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALI 230 + L+ I + + + + P+ L+ A VLA+ R+ + + + + Sbjct: 174 QNILMSFLVYIAAWKFLEHPARRWPY-ALVAVIATFNVLAIVPGRSGYVA---LGILIGL 229 Query: 231 AYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN-SVTSLGARL 289 Y K K + ++ + ++ NR NE + ++ Y N++ S +S+ RL Sbjct: 230 LMYQKLGAKGILPAAACVGLIGLVTYHNSERFHNRINEVVKEIKEYRNSSKSRSSVDLRL 289 Query: 290 AMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKG 349 YE GL I SP S A L+ + +L + HNE + G Sbjct: 290 EFYENGLQIAKSSPLMGSGIGSFAMKYRELMEQKGQL------VTENPHNEYVMLLVQNG 343 Query: 350 LMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGI 385 ++G+ L ++ + + + + + Sbjct: 344 IIGVGLFLCFFWVSWLTTRQLTGIDQALGQAVLAVY 379 >UniRef50_A9AZ26 O-antigen polymerase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZ26_HERA2 Length = 474 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 129/364 (35%), Gaps = 40/364 (10%) Query: 31 FSMIIAFVDNTFSIKIYNITAIVCLLSLILRG--RQENYNIKNLILPLSIFLIGLLDLIW 88 M+ + + ++ I+ L + +L G +++ L++P S+FL+ LL Sbjct: 64 TVMLQELLSFPLGLTATHVIGIMALGAWLLYGMAQRKIIIDTTLLVPWSLFLMALLLSAG 123 Query: 89 YSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAG 148 + + + + F+ V T + ++ ++++ + A Sbjct: 124 LTEY--------NAVDALKQVVRWFMALLAFVVTVATITTPKRAIGLIAVMFTVGVIEAL 175 Query: 149 YAMYIN-------SIHENDRISFGVGTATGAAYST-----MLIGIVSGVAILYTKKNHPF 196 + +I E R +G A M + + G+ + ++ + Sbjct: 176 IGIQQYRVGAGPFAIGETVRAYGTIGKPNTFAGFLELMWPMTLSVALGLLWFWWQQRQRW 235 Query: 197 LFLL-------NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIA 249 +L+ S +L + ++ +R + V L+A + + +L+ Sbjct: 236 HYLIGSALSAGASLIILAAVGVSFSRGAWIGIMGAVVVMLLAVDRRRALPLIALGGILLL 295 Query: 250 ILASIVIIFNKPIQNRYNEALNDLNSYTNA-----NSVTSLGARLAMYEIGLNIFIKSPF 304 + S +F I R + N+L + + ++ R+A ++ G N+F+ P Sbjct: 296 AIISQPELFPPVITERISSLTNNLRIFDAGRVTVTDENFAVVERMAHWQAGANMFLAHPL 355 Query: 305 SFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 ++ A G S H HN I + G++G + L L +++ Sbjct: 356 LGVGPDNFNR------AYPEFFVGRWSESQGHSHNYYIHIAAEAGILGFVAYLVLIAAVY 409 Query: 365 YIAY 368 AY Sbjct: 410 RQAY 413 >UniRef50_Q5E8K0 O-antigen ligase n=1 Tax=Vibrio fischeri ES114 RepID=Q5E8K0_VIBF1 Length = 410 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 59/404 (14%), Positives = 134/404 (33%), Gaps = 23/404 (5%) Query: 24 ITYILCFFSMIIAFVDNT---FSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 I YI +++ F + K+ I+AI + R K + ++ Sbjct: 21 IVYIPILWTLSFNFTLPNGRSIASKLLVISAIFSFIYFRKRVFLFKEKPKTFKILITSLF 80 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 I +L + + + + I +I K +++ + Sbjct: 81 IIILFRSILFLYHGEQTSSIRAF---------GIIFLYIYSFPYWLVKKEHIKNLTFISL 131 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL 200 L L A + N R Y+ ++ V ++ TK + + + Sbjct: 132 FLFGLDAFIHVINNGF---TRYGGNTNPNPYGLYAALIFIFVYIYNLINTKTHILYKTIP 188 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 + ++Q+R + + + IA + K SI +L + + + Sbjct: 189 LIIIGFLPIMISQSRGVWVSTILTLIIIHIARIKFNIKN--ISIYILTILAIAFSLYSTP 246 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 ++NR ++ + + N +SLG R+ +++ + + + PF E N Sbjct: 247 TVKNRIEATKIEIKNIEHHNLSSSLGVRIQVWKDSIPLIKEYPFFGLG-NKLKEINNTRF 305 Query: 321 AEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGL----L 376 + + +S HLH++ E + +G +G F + I K + + + Sbjct: 306 ENKKISQYSYYYSRNHLHSQYFEFITKQGFIGFFIIIGAIIFPLIIMRKDNDIFVKFCSI 365 Query: 377 ILTLGIVGIGLSDVII-WARSIPIIIISAIVLLLVINNRNNTIN 419 ++ +++V W +I + L L + I Sbjct: 366 SFLCVLLINFITEVPFNWINFTYTYLILILCLTLQSYHSTKDIR 409 >UniRef50_B1ZQU0 O-antigen polymerase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQU0_OPITP Length = 717 Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 60/193 (31%), Gaps = 19/193 (9%) Query: 190 TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIA 249 LF + L L LT +R + ++ VA + S ++ ++ Sbjct: 254 ASAVQRVLFGYVAVVFLLGLGLTVSRGAWISLAVVLVAWPLFARGGSWRRRLGWTAVVGV 313 Query: 250 ILASIVIIFN---KPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 L +I + ++ R+ + D + R ++ IF + P Sbjct: 314 TLGAIALTAFFQVDLVRERWIKLKQDSGELS----------RPILWRGAWRIFAEHPVWG 363 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 A S A + + + HN+ + S G +G + + + Sbjct: 364 SGAGSFAVAFEK--HRPATFQDDPLW----AHNDYLNTLSDYGAVGFTLCFGAWAVVGWG 417 Query: 367 AYKKRALGLLILT 379 A++ R G Sbjct: 418 AHRARKRGRTGFP 430 >UniRef50_D1B406 O-antigen polymerase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B406_SULD5 Length = 417 Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 94/252 (37%), Gaps = 7/252 (2%) Query: 119 IVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTML 178 + L LK + L++L S L G+ + I +++ + M Sbjct: 107 LALLVKKEWLKPLVVAFLFSLSVSSALSMGHYLEWWQIRGQAQLNTSPFMNSIHYSVFMA 166 Query: 179 IGIVSGVAILYTKKN---HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNK 235 +G +S + I+ T K F L S ++ L L+ R L F + + +I + + Sbjct: 167 VGAISTLYIMITLKRDRVKQFGLLALSLLLIVTLFLSNGRTGQLSFLV-ALCWMIVMFFR 225 Query: 236 SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIG 295 K S +V + I A + Q R + D+ TS+G RL+ + + Sbjct: 226 GNMKLLSGLVFTVFIAAYGIYNGVPQFQKRIDTIFVDVQKMKQGVWNTSIGLRLSYWLLA 285 Query: 296 LNIFIKSPFSFRSAESRAESMNLLVAEHN---RLRGALEFSNVHLHNEIIEAGSLKGLMG 352 I ++ P ++ + +++ + LH++ + GL+G Sbjct: 286 KEIVLEHPLLGVGYGDYKLAVEEALQKNDFGIEAKAKAFLITNDLHSQYLMVVVQGGLIG 345 Query: 353 IFSTLFLYFSLF 364 + ++ +L+ Sbjct: 346 LVLFVWFLIALY 357 >UniRef50_A6VTJ6 O-antigen polymerase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VTJ6_MARMS Length = 440 Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 72/209 (34%), Gaps = 16/209 (7%) Query: 174 YSTMLIGIVSGVAILYTKKNHPFLFL-LNSCAVLYVLALTQTRATLLLFPIICVAALIAY 232 + +LIG + L +K + L L + ++ + +R L I + Sbjct: 176 FGVILIGFLCFTRTLLSKSKWLAIPLFLAIAYCILIIYINSSRQAWLALLITAFFMASYF 235 Query: 233 YNKSPKKFT-------SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSV--- 282 K KK T I L + I+I N+ I R LN+ + + Sbjct: 236 TVKRFKKATGKQKTTTLGIFLAGILSLGIIISNNETIVERVMLEKEALNAIASLDFDDVP 295 Query: 283 -TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEI 341 +S G RL + + P + R+ M L + HLHN Sbjct: 296 YSSFGIRLHSWVAATDFIKAKPIFGWGSNGRSLVMKKTE----WLPDDIRKDFGHLHNIY 351 Query: 342 IEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 IE G++G+ + ++ + +K+ Sbjct: 352 IEMLVNFGIVGLAFYISIWVVMAKSLFKQ 380 >UniRef50_Q1QJM5 O-antigen polymerase n=4 Tax=Bradyrhizobiaceae RepID=Q1QJM5_NITHX Length = 434 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 112/326 (34%), Gaps = 26/326 (7%) Query: 46 IYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHS 105 I+ + + L+ I + + ILP++ F++ L +W ++P+ A H+ Sbjct: 60 IFAVIWLFALVPTIEPTLLQLFKRPICILPVAFFVLALAGTLW------SSAPWTARLHA 113 Query: 106 YLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEN------ 159 AK+ + I L + S+ + V L+ + + Sbjct: 114 VGPLAKLLV----IPLLIYHFRRSSRGQWVFTAFLVSCALLMIMSWIVAFDPRLALKSGA 169 Query: 160 -DRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLAL---TQTR 215 + ++ + + V L +K LL AV +V + +R Sbjct: 170 YYGVPIKNYIDQSQEFALCAVALAYPVVHLLLQKRIKEAALLLIVAVSFVANMMFVVVSR 229 Query: 216 ATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNS 275 L+ P++ + + ++ + ++ + +Q+R + + Sbjct: 230 TALVTMPVMLGIFMFL---HLTPRRMIAVSCTTLLAGVVMWFASPSLQSRVASFSSQYDQ 286 Query: 276 YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV 335 Y ++ TS+G RL + L F+ +P + S L A GA Sbjct: 287 YETSDQATSIGLRLEFWRKSLRFFVDAPLAGHGTGSVQ---GLFTAAAVGQTGAAAEVVN 343 Query: 336 HLHNEIIEAGSLKGLMGIFSTLFLYF 361 + HN+ + A G +GI ++ Sbjct: 344 NPHNQTLNAAVQWGSLGILVLYAMWL 369 >UniRef50_A6DE46 O-antigen polymerase n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DE46_9PROT Length = 428 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 58/409 (14%), Positives = 135/409 (33%), Gaps = 21/409 (5%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRG--------RQENYNIKNLILP 75 I +L +F +++ FV + I + ++ +L ++ +Q + L L Sbjct: 7 INSVLNYFILLLIFVSLFSTAAIRIVLGLIFILWILENNFQIKFSILKQYIKHSWPLKLL 66 Query: 76 LSIFLIGLLDLIWYSAFKVD--NSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE 133 L F I + W ++ + F+ Y S+ +++ I+ + K Sbjct: 67 LIFFTIKFFSIFWSNSIYNGFWSGYFKNAYDSFFRHDLLYLLIIPIILTSFKKNNAKKAI 126 Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193 + +S + + Y ++ + + + I + ++ ++ +K Sbjct: 127 DIFLLGMFISEIFS-YLLFFDLLPHWNFIRGTPYNPSPFLNHSLYSFLLVIFIFTLFEKF 185 Query: 194 HPFLFLLNSCAVLYVLA-------LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 L+ L+ + R L+F I V Y K+ S +L Sbjct: 186 QRTNILIEKLIFLFFSITATINLFINGGRTGQLIF-IFTVFFYAFYKYPKKIKYVVSGIL 244 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 I ++ ++ F+ R N AL ++ N N +S G R + ++F K+P Sbjct: 245 AIIVIFTLAYKFSPIFNQRINNALYEVRGIVNGNYSSSWGGRFLSILVTKDVFEKNPILG 304 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVH--LHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 + + + ++ + +H +HNE + +G++G+ + F F Sbjct: 305 IGIGNSRKEVFEIIKSNYPNAFDYYKRRLHSDMHNEYAQILVEEGIIGLIIFIMFLFISF 364 Query: 365 YIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 I V + + + + + Sbjct: 365 KQKINDGFYNFFIKLFIFVFTLALFTGNFFSKMFTSFVLFYIFFAISVK 413 >UniRef50_C9LXH7 Putative O-antigen polymerase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LXH7_9FIRM Length = 448 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 65/395 (16%), Positives = 126/395 (31%), Gaps = 51/395 (12%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 I Y + + +IA + + I L L++ + +P ++F + Sbjct: 15 IYYAILLEAFLIAL-SPPLATAALLLGVIFWLARLVVDKECRRFRRLPYDVPAALFAL-- 71 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 L S F + F + Y+ Y + I SQ K L L Sbjct: 72 --LGAVSIFVSPDRGF-SFYNYYNLVGVYLLTYLLIGQNVQASQDIRKIVYALGLSCVLV 128 Query: 144 FLIAGYAMYINS------IHEND-------RISFGVGTATG-AAYSTMLIGIVSGVAILY 189 L Y + D R+ A Y + + + Sbjct: 129 LLYGFYQFAFGIDTSTMKWVDGDAFPELKKRVFSTWENPNILAGYLDVAMCFAFAFFVKM 188 Query: 190 TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIA 249 + + LA+T R L+ +I + L + ++L + Sbjct: 189 RDQRRRIALGAALVLLAACLAMTYARMAFLVIALIFI--LYGMFRDGR------VLLAVG 240 Query: 250 ILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSA 309 ++A + +F+ + +R + TS RLA++E L + PF Sbjct: 241 VVAGALFLFDPALLDRVTSVFTRV--------DTSSEMRLALWESTLAMIGDHPFFGIGW 292 Query: 310 ESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 + + L+GA + VH HN + + G++G S L+ +F +A+ Sbjct: 293 GAY---WMVYPEYDFYLQGA-DVLIVHAHNMYLNYAAEIGVVGAVSFLWFFFGTMGLAFF 348 Query: 370 KRA-----------LGLLILTLGIVGIGLSDVIIW 393 + L + + I GL+D +++ Sbjct: 349 SKVHDSEGFRQGLMLAISLAFFSIALNGLTDDVLF 383 >UniRef50_A6QBN3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QBN3_SULNB Length = 410 Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 74/196 (37%), Gaps = 7/196 (3%) Query: 191 KKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 +K F + L++ + R L F + A + +Y + + +++VL++ I Sbjct: 179 EKIALLFFFITITGNLFI---NEGRTGQLAFLVGIFATVFIHYRINFRSIIAALVLIVVI 235 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 + + Q R A +D+ +S G R+AMY + +I P Sbjct: 236 FTGAYTL-SDKFQTRVQAAQHDITKIEKGQFTSSWGMRVAMYIVAADIIKDHPLIGVGVG 294 Query: 311 SRAESMNLLVAEHNRLRGALEFSNV---HLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA 367 ++ + ++N + H H++ + G +G F L +++ ++ Sbjct: 295 DFRDAATEALKKNNHNFNKKVVQFIPKYHFHSQYLNVLVQNGFIGFFLLLMVFYQFTRLS 354 Query: 368 YKKRALGLLILTLGIV 383 L L L + I+ Sbjct: 355 ISDPELKELSLLIVIM 370 >UniRef50_A4JGJ5 O-antigen polymerase n=17 Tax=Burkholderia RepID=A4JGJ5_BURVG Length = 427 Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 3/174 (1%) Query: 212 TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALN 271 T LLL ++ V ++ +SP + + + L+ A++V R + ++ Sbjct: 209 TGQVIALLLILVVAVRFVLVLRRQSPLRASLAAGALVLAGAALVAAACTVHNGRLTKVVS 268 Query: 272 DLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALE 331 ++ Y ++VTS G RL Y+ GL ++ P A L A G L Sbjct: 269 EVQQYRQTDAVTSTGLRLEWYKKGLELYRMRPVIGYGAGGLEFEFQKLAAGKTAAEGQLT 328 Query: 332 FSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGI 385 + HNE + G +G+ + L + + +L + Sbjct: 329 ---SNPHNEYLLMAVQLGTIGVLLFVNLIVQIARGSRGLDPRSKHLLLAWLAIF 379 >UniRef50_C3WA18 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WA18_FUSMR Length = 399 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 73/408 (17%), Positives = 147/408 (36%), Gaps = 33/408 (8%) Query: 22 EIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLI 81 EI+ YIL S+ I F S+ + ++ + + N ++ L+ +F I Sbjct: 12 EIVLYILG-VSLFINFNITKISLGFIFVFILIDIFYFKEKMEFGNKKLRKLV----LFFI 66 Query: 82 GLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYS 141 G+ ++W + +RA ++L + FI ++ L + +K + + Sbjct: 67 GVG-ILWNFLADFN---YRAV-RAFLKINQYFIITFYLYSLVKEKKEILRKFIISIGIGY 121 Query: 142 LSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLN 201 L G Y + R +G + A + +I + S IL +K +F + Sbjct: 122 LLLFFNGINTYF-LKKDISRFEGYLGIMST-ALISSIITVFSFGGILESKSKKIKIFSIF 179 Query: 202 SCAV-LYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 CA L++L ++QTRA LL +I ++ NK+ K S I ++ +L F Sbjct: 180 LCASSLFLLVISQTRAALLA--VILSCFILVVINKNIKLLLSCISGMVLLLI----FFQT 233 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 P NR+ + ++ TS G R+ M++ + + + P + + + + V Sbjct: 234 PYSNRFKKNTFNIERTVQN---TSNGLRVEMWKNAIWRYSQHPITGTGTKQDKKLFDKYV 290 Query: 321 AEHNRLRGALEF-------SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK---- 369 + H+ + G+ IF L + K Sbjct: 291 DMMPEDTKVQRYYKSIFEKGFDDAHSMYLNNLVYHGVFSIFQFLIFLPYFLIVLIKNLEF 350 Query: 370 KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 K L + G+ + + P+ + + + +N Sbjct: 351 KYRLATFGALISYCIYGVVWPLWRGGADPVFLWVILAITGCSCLKNKG 398 >UniRef50_Q3B1X3 Putative uncharacterized protein n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B1X3_PELLD Length = 410 Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 57/345 (16%), Positives = 124/345 (35%), Gaps = 28/345 (8%) Query: 70 KNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLK 129 ++ F++ L+ L+W V AK +F+ Sbjct: 64 PVVLAVSGFFVLHLIGLLWTEDMPV----------GLHVVAKAAYLLLIPIFMLGVKPEH 113 Query: 130 SKKESVLYTLYSLSFLIAGYAMYINSIHEN------DRISFGVGTATGAAYSTMLIGIVS 183 ++ + + I Y +++ + D + F +G T + + + + + Sbjct: 114 MRRYLWAFLAAMVVQAIWSYGIWLQLLPTGTFGGPEDPVMF-MGRITYSPFLAIAVYLSL 172 Query: 184 GVAILYTKKNH-PFLFLLNSCAVLYV-LALTQTRATLLLFPIICVAALIAYYNKSPKKFT 241 + +L LF L+ L V L LTQ RA + F ++ V A+ Y++ Sbjct: 173 ALGVLERGAGWGKKLFTLSLGVFLAVDLFLTQGRAGHVAFFVVAVIAVFQYFSGRRWVAG 232 Query: 242 SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIK 301 ++++A L + F+ + R +A++D N Y NS TS+G R+ + IF + Sbjct: 233 LVSLVMVAGLFTAAYTFSDAFKGRLGQAVSDSNGYEMTNS-TSVGTRITFVLNSMEIFKE 291 Query: 302 SPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF 361 P + + A + H+ G++G+ + L++ + Sbjct: 292 HPLIGVGTGDFRVEYARMNERMSPAMPATH----NPHDMYALEMVQFGVLGLAALLWILY 347 Query: 362 SLFYIAYKKRALGLLILTLGI-VGIGL---SDVIIWARSIPIIII 402 A K + + + + G+ SD ++ ++ + Sbjct: 348 LQVSFARKSNNPLQRNVGVALPLIYGVIMFSDSYLFGHFSTLLFV 392 >UniRef50_C9LNB5 Inorganic carbon transporter/0-antigen polymerase family protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LNB5_9FIRM Length = 408 Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 24/221 (10%) Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 AY MLI + + A+ LF + LALT +R + I + + Sbjct: 172 GAYLLMLISVFAPFALGEKNNKRKILFAGFLFVLSVCLALTYSRGAWISLAGIVLGLAVF 231 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 Y + L+ + I+ ++ + R+ + TSL RLA+ Sbjct: 232 YDKR--------FGLVFLAVPLILFFYHGQVAERFISLFS--------GEDTSLSLRLAL 275 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 +E + + + P S + E+N H H+ + + G+ Sbjct: 276 WESTIAMIEEHPLLGIGWGSYWLAY----PEYNFFIEDASVVIFHAHDMYLHIPAEVGIP 331 Query: 352 GIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVII 392 G +F ++++ G+ ++ L GLS +++ Sbjct: 332 GGILYFLFFFGQGVMSWRIWRRGVGVMKL----FGLSGMLL 368 >UniRef50_D1BNH3 O-antigen polymerase n=3 Tax=Veillonella RepID=D1BNH3_VEIPT Length = 412 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 86/241 (35%), Gaps = 31/241 (12%) Query: 172 AAYSTMLIGIVSGVAILYTK---KNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA 228 AY M++ + ++Y K L+ + + LT +R + F + + Sbjct: 171 GAYLLMVLSVCISYILVYMKENRTREVVTMLIIGVVLFLTMLLTYSRGIWISFAAMILYW 230 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGAR 288 I + + L + ++ I+ + + +R TS R Sbjct: 231 AIFVERR--------LFLSLLVVPLILYFYEGEVASRLWSIF--------QGHDTSSDLR 274 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLK 348 A+++ + I ++P + L+ E+N H HN + + Sbjct: 275 WALWDSTMYIVRENPIFGIGW----NTFYLVYPEYNYYIQGPNVLMYHAHNLYLNILAET 330 Query: 349 GLMGIFSTLFLYFSLFYIAYKKR--------ALGLLILTLGIVGIGLSDVIIWARSIPII 400 G+ G+ S L + + + + +G+ L +G++ GLSD +++ + I+ Sbjct: 331 GIPGLLSFLAVIVGHVVTSVRLKGDMFRQAAQIGIGALAIGVLFSGLSDFELYSHQVTIV 390 Query: 401 I 401 Sbjct: 391 F 391 >UniRef50_A4ACC3 O-antigen polymerase n=2 Tax=unclassified Gammaproteobacteria RepID=A4ACC3_9GAMM Length = 419 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 74/218 (33%), Gaps = 14/218 (6%) Query: 212 TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP--IQNRYNEA 269 + RA + + A I Y+ + + +L +A++ + ++ R Sbjct: 190 SGKRAAWISVSVELAALGIYYFFRGRLGLLKVVAVLAVGIAALTFAYQSSDWVRERSVVI 249 Query: 270 LNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNR-LRG 328 ++ L+ + + G RL ++ L + + + E +R R Sbjct: 250 VSALDEPSYTAVNKATGLRLPIWRTALAMGEAHWINGVGPRGFRYAYRDFAVEGDRWARP 309 Query: 329 ALEFSNV---HLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG-----LLILTL 380 A E H H ++E + G++G+ F L + A + L Sbjct: 310 AGEAGGAKASHAHQLLLELWAETGVVGLMGYGIFLFLLGSAWQRGDAHARSRALPYGVAL 369 Query: 381 GIVGIGLSDVIIWARS---IPIIIISAIVLLLVINNRN 415 V L+ + W S + + + + LL + R+ Sbjct: 370 VGVLFPLNTHLAWYSSWHALLLWLFIGVFLLALSEKRS 407 >UniRef50_A8PNA9 O-Antigen Polymerase family n=1 Tax=Rickettsiella grylli RepID=A8PNA9_9COXI Length = 405 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 98/293 (33%), Gaps = 19/293 (6%) Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR 161 +H+ + +K + + + + L++ L + S R Sbjct: 91 AFHTLIKYSKFLLGFFLLSVFRDKKTARYAFFAFLFSATLT--LFISVIKFFGSWDFLHR 148 Query: 162 ISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP----FLFLLNSCAVLYVLALTQTRAT 217 G ++ L+ + + LL+ AV VL + +R+ Sbjct: 149 FPADSGVFKDHIFTGFLLAMTGYCYAVLAFSIKNAGRWLFGLLSLVAVYDVLFINLSRSG 208 Query: 218 LLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYT 277 + ++ L+ + + K S V + L + ++ +NR+ A + + Y Sbjct: 209 ---YLVLFSLILLLAWQQFSWKGLSMSVFISTFLIAGLLFLPANFKNRFALAQSQMTQYR 265 Query: 278 NANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHL 337 + + TS+G RL Y+ L + K P+ S A+ + +E + Sbjct: 266 HGSCDTSIGLRLEFYQNSLKLIKKHPWIGTGTGSFAKDYLSITSEKHVATQNP------- 318 Query: 338 HNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK---RALGLLILTLGIVGIGL 387 HNE GL+G L L+ +++ R + L I L Sbjct: 319 HNEYFNIIVQFGLLGFIVLLALFVVHGITSFRLTGNRQYFAQAVLLSIAVGSL 371 >UniRef50_C1I9Q4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Q4_9CLOT Length = 433 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 57/338 (16%), Positives = 116/338 (34%), Gaps = 28/338 (8%) Query: 46 IYNITAIVCLLSLI-LRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYH 104 + ++ +++LI L+ + N+ K ++ L LI + + A Sbjct: 56 FLYVVGVISIITLIGLKVTEFNFEHKIALVFLITMLI---------PSILSPQKYVAFMG 106 Query: 105 SYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYI----------- 153 + ++ +I+ L S+ +L + S ++ Y + Sbjct: 107 NIQRNEGFVMYCIYILLFILASKYFVLNRKLLNLVLIFSCIMGVYGILQFYGIDPVQFWM 166 Query: 154 -NSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALT 212 I +D I ++Y + + I + I Y K + L+ S + L T Sbjct: 167 FGFIQVSDSIGMIGNRNFFSSYLCIFLFISMAIYIFYGGKRY----LIYSIILFTALICT 222 Query: 213 QTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALND 272 TR+ L F I + LI K K+ S ++ I+ L+ +++ A N Sbjct: 223 LTRSGWLAFIIYSIIGLIFVI-KDKKRLKKSGIVFISFLSIFLLLNLSTNGKIIGRATNT 281 Query: 273 LNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES-RAESMNLLVAEHNRLRGALE 331 + + R+ + I + F +PF ++ + + +H Sbjct: 282 IAIDETGIAKVEDSGRIEILNISWSAFKDNPFIGWGPDTLKYRLDSQYSEKHQEYINKHS 341 Query: 332 FSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 HNE +E G++ + S L L + Y K Sbjct: 342 AYIDKSHNEFLEYAVSNGILNLISYLLLIGVIMYKLIK 379 >UniRef50_A3ERX2 O-antigen polymerase n=2 Tax=Leptospirillum sp. Group II RepID=A3ERX2_9BACT Length = 503 Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 112/308 (36%), Gaps = 21/308 (6%) Query: 74 LPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE 133 L L + G + +I S F++ K +I + FL K+ Sbjct: 139 LVLLFCVFGAISVIHTDLVFAQWSVFKSIVD-----YKRWIDPFLVFFLFSYLVRTQKEA 193 Query: 134 SVLYTLYSLSFLIAGYA-MYINSIHEN--DRISF----GVGTATGAAYSTMLIGIVSGVA 186 L L ++S ++ G +Y + + R+ G GA Y+ + I+ V Sbjct: 194 KTLIYLMAVSMVVVGIGSLYQHHVISGRSHRVRLKGIAGQANQMGAFYANYMFLILGFVW 253 Query: 187 ILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 + LF L L L T++R L + + L+ + + F +I Sbjct: 254 MKGLTFLKKSLFALGFWGCLLGLFATESRGDFLA---LVMGMLLFLFLRKKVLFFVAIAG 310 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSY----TNANSVTSLGARLAMYEIGLNIFIKS 302 +I + +I + + ++NR + + Y ++ S RLA+++ N+ + Sbjct: 311 IIFVSVNIQFLPSG-LRNRIQHTVTHRDPYGFSGSSGQLDASARTRLALWQGAANMIMSH 369 Query: 303 PFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFS 362 P + E + V HN L + HN + G+ G+ + L L Sbjct: 370 PVMGVGYKMFPEYIYQYV-PHNEETDRLPLRHRDGHNAYLMIGAEMGVPALLLFLLLLLY 428 Query: 363 LFYIAYKK 370 +F I ++ Sbjct: 429 MFRIMWRA 436 >UniRef50_C8PLC3 O-antigen polymerase family protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PLC3_9PROT Length = 414 Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 115/325 (35%), Gaps = 30/325 (9%) Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATG 171 +++ + L S+ K ++ T L ++ + G AT Sbjct: 89 LWVLLYLAIKTYLDSKDKLERFFKFQTYIVLFVAFNALLQFLIGY-NIFGVPILDGRATD 147 Query: 172 AAYST----------MLIGIVSGVAILYTKKN-HPFLFLLNSCAVLYVLALTQTRATLLL 220 +S+ + +G+ + L + + H L+ +L + L+ +R LLL Sbjct: 148 IFFSSNSRIFPFILPLYVGVFGAMLSLKDRSSSHYILYGSALFGILIAVPLSGSRGPLLL 207 Query: 221 FPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN 280 + + +K ++ ++ + + + +Q+R + + + Sbjct: 208 LSVFIPIIVWTSPY---RKTAFIMLAVLCVCVISIAFNSDKLQDRLISLAHPFENQKH-- 262 Query: 281 SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA----ESMNLLVAEHNRLRGALEFSNVH 336 R+A+++ + F +P ++ + + + + H Sbjct: 263 ------LRVAIWKTAIEEFKDNPILGVGFKNFKYRQFDYYKPEFESYEIDKEQNKMVE-H 315 Query: 337 LHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIG-LSDVIIWAR 395 H+ ++ + +G++G + L+FS+ Y Y+K L+ L+ + ++ Sbjct: 316 AHSPWMDILAEQGIVGFGFAITLFFSILYNVYRKGTFILIGAFSVFYAFSFLNSTFVISK 375 Query: 396 SIPIIIIS-AIVLLLVINNRNNTIN 419 S + +I + +++ N IN Sbjct: 376 SRWSFFMIFSITIFMLVANYYKYIN 400 >UniRef50_C7LVM7 O-antigen polymerase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVM7_DESBD Length = 512 Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 91/292 (31%), Gaps = 53/292 (18%) Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMY--INSIHENDRISFGVGTA 169 ++ I + L+ L + + + L+ L L AMY ++ + + + A Sbjct: 164 VWWLFLVIFAVLLSQALSREAKLPTWLLHFLFVLAGLQAMYGIAQTLLPSLGVLWDTHAA 223 Query: 170 TGAAY-------------STMLIGIVSGVAILYT---------------KKNHPFLFLLN 201 TG AY +G++ V + Y ++ L Sbjct: 224 TGQAYKGYARGTFINRNHFAAFLGLLWPVLLAYLLVLKSPRKMEQILGERQRAQLLVQKK 283 Query: 202 SCAVL------YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 + + L +Q+R +L + + + + I +L Sbjct: 284 AFGIFCLALVVLALFFSQSRGGILAAMLAFTLLSLFAGLWRKRVAVALATCWIIMLGYGA 343 Query: 256 IIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES 315 +I + + NR+ + + + R+ M++ G I P + + E+ Sbjct: 344 VIGLEGLTNRFLQLDHGMAG------------RVEMWKDGWKILQDHPLTGTGLGTYPEA 391 Query: 316 MNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA 367 + R A H HN+ +E GL + + L+ + Sbjct: 392 SRAYQNAFSPERRA-----DHAHNDYLETAVELGLPAACVLIGGIWGLWCLR 438 >UniRef50_B2KDP4 O-antigen polymerase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDP4_ELUMP Length = 737 Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 115/354 (32%), Gaps = 20/354 (5%) Query: 23 IITYILCFFSMIIA-----FVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLS 77 +I + + F S+ + S+ + + + + ++ +N + + L Sbjct: 26 VIGWAVFFISLSVYVRTYDIAAVKISLFFCALAVMFSVWASFKSLSEKPFNKQLFLSFLP 85 Query: 78 IFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLY 137 L I + S +L F + + + +K S + Sbjct: 86 FIFFALWLFISFIINPYKISSLEDFLKQFLYIFIPFFIATSFSLKEVGTVVKFLTASAVI 145 Query: 138 TLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL 197 I G + + RI +G A + + + LY +K Sbjct: 146 CFAYGFLQITGLDIMPWADFFGKRIFSALGNPNMFADFVIFMNFIVLA--LYLRKFEKK- 202 Query: 198 FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 +LL A L L T+++ L F + V + Y P F I ++ ++ + Sbjct: 203 YLLLFAAGLVNLYFTESKGAWLSFGVTLVFFVFLYVKYFPSNFIKKHSKFIWVVGVVLAL 262 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 + + + + + S+ R + + + F+ S A Sbjct: 263 ASVIL----------VVVFASKRMQ-SVDFRAITWRGIVQMSADKAFTGYGTGSFATVYP 311 Query: 318 LLVAEHNRLRGALEFSNV-HLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 + + H NE +E + G++G+ L+L + +FY+A+KK Sbjct: 312 TYRRAEIFYIEKIHNNETQHAENEFLEVLTDNGIIGLTLFLWLLYFVFYLAFKK 365 >UniRef50_B8CZB5 O-antigen polymerase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZB5_HALOH Length = 393 Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 113/319 (35%), Gaps = 34/319 (10%) Query: 108 NTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVG 167 + + F + T ++ + + Y +Y + R+ G Sbjct: 83 EIGTVGLLILFYYAVVNTVNDLKLVRNLSLVSLISLIVASIYGIYQHYYLNYPRVQ-GFM 141 Query: 168 TATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYV--LALTQTRATLLLFPIIC 225 + + I + + +L+ N L +L++ L T++R L F Sbjct: 142 FSLAFGNVLAMFSIFTLIYLLWGNLNKKKKIYLIFPTILFLVNLLFTKSRGAWLAF---- 197 Query: 226 VAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSL 285 L + I++++ +L + + NR+ + N+ ++L Sbjct: 198 ---LGGTGFLGLIRDRKIILIMLVVLIASFYLLPDSYINRFMSI------FDLRNNRSNL 248 Query: 286 GARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAG 345 G RLA+++ L ++ + + + N R + H HN I++ Sbjct: 249 G-RLALWKGSLLMYRDHFINGVGFGKFS------IEYENHYRQPHTATTCHAHNNILQFM 301 Query: 346 SLKGLMGIFSTLFLYFSLFYIAYKKR--------ALGLLILTLGIVGI---GLSDVIIWA 394 + G +G+ + ++L +S+ + YK+ L LL L ++ GL++ Sbjct: 302 AETGSIGLIAFVWLMYSIIKLLYKRYLTIESLNWKLYLLGSLLAVIMFNIQGLTEYNFGD 361 Query: 395 RSIPIIIISAIVLLLVINN 413 + + + L +VI N Sbjct: 362 AELNRLFWFLLALNVVIIN 380 >UniRef50_A4G2M7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2M7_HERAR Length = 423 Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 42/275 (15%), Positives = 92/275 (33%), Gaps = 21/275 (7%) Query: 78 IFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLY 137 + L G+ LIW+ + + N ++ + + L + L Sbjct: 76 LLLAGVCALIWHESSDILNPQI-----------RLLVPALSAYLILRKGNLAPQARIYLM 124 Query: 138 TLYSLSFLIAG-YAMYINSIHENDRISFGVGT-ATGAAYSTMLIGIVSGVAILYTKKNHP 195 +L+ + A + Y++ ++ R S A S ++ Sbjct: 125 HAIALAGITAFIWTAYLSLSGQDVRSSLASNAIPWAVACSFYACLLLPAALAEQQSMLRR 184 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF-----TSSIVLLIAI 250 +L+L + + L+Q+ L+ P + + ++ + + + IA+ Sbjct: 185 WLWLCAVACAVIAVVLSQSLGAFLIIPWCALLCIWFWHRHRVRSSGRLPIIAQLASAIAL 244 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 + + + + A T N TS GARL M+ + F SP+ + Sbjct: 245 ILASAWWAPGDLLKLHKTAQEISEVRTTQNYNTSTGARLYMWNLAWQGFQHSPWIGVGSA 304 Query: 311 SRAESMN---LLVAEHNRLRGALEFSNVHLHNEII 342 R + A + + A+ H+HN+ + Sbjct: 305 ERIRRLQHAGEDEANPDLSKLAVVRGVGHVHNQYL 339 >UniRef50_A9DNM3 Secreted polysaccharide polymerase n=1 Tax=Kordia algicida OT-1 RepID=A9DNM3_9FLAO Length = 827 Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 56/356 (15%), Positives = 117/356 (32%), Gaps = 59/356 (16%) Query: 118 FIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMY--INSIHENDRISFGVGTATGAAYS 175 + F L ++ ++ L + LS + + + IN N+ IS G + Sbjct: 118 IVAFFCLYIFIRKDPKAFLNFISKLSIFVVTFYSFRAINFFLSNNNISRSNELIIGFQHG 177 Query: 176 TMLIGIVSGV----------AILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIIC 225 I I S L+ +K + + + V+ L TR +L +I Sbjct: 178 FSNINIYSAFLVIQLPLLMYGFLFFEKIWKYAAGIVTYMVILALLFAGTRTAVLSLVVIF 237 Query: 226 VAALIAYYNK-------SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDL----- 273 + + K + I+ + L +++ I +++DL Sbjct: 238 ICTISFMIYGIVKHSETVKLKKEALILGIAPFLLIFLVLNVNRIDKGSMNSIDDLLNTKN 297 Query: 274 -----------NSYTN------------ANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 N+Y+N S TS G R +++E+ F K+P Sbjct: 298 LDFYGGRKSVKNNYSNEKTMMPINLKVNKASRTSSG-RFSLWELAFRNFKKNPILGVGYG 356 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY---FSLFYIA 367 + ++ + H++ +E + G++G + L+ F F Sbjct: 357 NYKAVGKSEHYKNYANSRGAFANPRRAHSDFMEKLAETGIVGFLLYVSLFVVPFLWFVGL 416 Query: 368 YK-----KRALGLLILTLGIVGIGLSDVIIWARSIP---IIIISAIVLLLVINNRN 415 + K+ + + L VG L ++ + P + I A+ +L ++ Sbjct: 417 LRREKDYKKQFMYVTIFLVAVGYTLDALLNFPLERPPIQLYFIVAVGFMLAFARKD 472 >UniRef50_C6MZJ1 O-antigen biosynthesis protein n=2 Tax=Legionella RepID=C6MZJ1_9GAMM Length = 419 Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 86/239 (35%), Gaps = 12/239 (5%) Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 A + GI+S A L +LF++ + L R +++ ++ L+ Sbjct: 160 VALAVYFAGILSFEAHLNKWLRAYYLFMVA-LGSYQIFFLNTGRTGYVVYGLLISLLLV- 217 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 K P K L ++ + + +Q R ++D+ TSLG R+ Sbjct: 218 --QKLPLKKAMIGFTLFCAAIGLIYLASPLMQVRTAALISDIKFLQQHEENTSLGFRVQF 275 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 ++ ++F + P + S + + ++ H + + G++ Sbjct: 276 HDYAHSLFNQHPLIGVGTGAFKYS---YARDQPVPAWDRKLNDPHS--QYWLTLAEHGII 330 Query: 352 GIFSTLFLYFSLFYIAY---KKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVL 407 GI L +LF + K+ L + + G +D I+ ++ ++I L Sbjct: 331 GITLLLLFIGTLFITIFQLSKETRPIPLGILVAFCFGGFTDSILCFSTVGTLLIVFCAL 389 >UniRef50_C0WB04 Predicted protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WB04_9FIRM Length = 397 Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 31/271 (11%), Positives = 83/271 (30%), Gaps = 23/271 (8%) Query: 146 IAGYAMYINSIHENDRISFGVGTATGAA-----YSTMLIGIVSGVAILYTKKNHPFL--- 197 + + +R+ G A G +++++ + IL+ +K Sbjct: 122 FIAFIAFDGLCTFGERLITGADRAHGLGDGWLRHASIVATVFPASIILWLQKAEKISHRN 181 Query: 198 -FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 L+ + ++ + TR++ + + + + + + ++ L A I Sbjct: 182 GLLVAAVLIVLGAIGSGTRSSWVGIFVSVILVTAESLRERNSRIVAVLLALSCSFAVIA- 240 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 + + R+ S +N + S G R+ ++ + P ++ Sbjct: 241 -ASPALSQRF-------FSISNVTTDRSNGDRIEAWKKAAVMIQDKPVFGFGILQGGKAY 292 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLL 376 +G H HN ++ GL+G+ S FY+ Sbjct: 293 LAHYRTKADTQGL-----HHFHNIYVQTAVDSGLVGLMGLASWILSSFYLFRHVENPYAF 347 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVL 407 +G + + + + + + + Sbjct: 348 AGFCAWIGFCTVGMFDYTLGMSAAVKTLLFM 378 >UniRef50_C7HY66 O-antigen polymerase n=1 Tax=Thiomonas intermedia K12 RepID=C7HY66_THIIN Length = 419 Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 113/306 (36%), Gaps = 19/306 (6%) Query: 113 FIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAG--YAMYINSIHENDRISFGV-GTA 169 + I+ LT +LK + T LS L++ Y I + ++ G Sbjct: 102 LLAIPIIIGLTPDERLKRLALNAALTALVLSLLVSYARYFGIIPLYTDPNQAYIGFQNRI 161 Query: 170 TGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLY-VLALTQTRATLLLFPIICVAA 228 T Y+++ I + AI ++ KN +++ + + LA+ R + I Sbjct: 162 TFGLYTSIASYIFAYRAIKHSDKNWKVAYIILFLSSSFNTLAVNNGRTG---YVIFFALT 218 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANS--VTSLG 286 + Y ++ + I + +++ + ++R ++++ + +S Sbjct: 219 AMFLYRNIQPRWRLPSAGVALITITALLLASPVSRDRIERSISNAETIQQKAPVEQSSTV 278 Query: 287 ARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGS 346 R + ++I +P S R+ G + + + HN+ + S Sbjct: 279 IRWQFLKNSIDIIRSAPLFGHGTGSFES------QYEKRIIGTTQVGSSNPHNDYLLILS 332 Query: 347 LKGLMGIFSTLFLYFSLFYIA----YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIII 402 G+ G+F +F +++ A + + +L I+ GL+ ++ A ++ Sbjct: 333 QLGVFGLFFEIFFIATIYIKARLMNNESQEWAYALLVAFILYSGLNSTLLDAGEGRFFVV 392 Query: 403 SAIVLL 408 ++L Sbjct: 393 LLAIVL 398 >UniRef50_C1XLK8 Lipid A core-O-antigen ligase-like enyme n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XLK8_MEIRU Length = 428 Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 104/310 (33%), Gaps = 18/310 (5%) Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 L I ++ ++ L W + AT+ A+ + I F + + Sbjct: 84 LRISILAVVLLFWACLSYFWSVDPSATWDKLQALAQQLVGALAIAFFIMVRPNTLQPMLF 143 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 Y+L + + G Y+ + R +F + +L+G + V + T ++ Sbjct: 144 FYSLGASIAALQGIFNYLRNPLS--RTTFTGAADAADFAAVVLLGSLIAVGLWLTTRSPW 201 Query: 196 FLFLLNSCAVL--YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 + C L + L+ TR+ + I ++ L+ + Sbjct: 202 MRWYSMFCFALCTLAVVLSGTRSAWVAIVITLALVVLPRLGWRQFLSLGLTFGLVGLALF 261 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 + N+ + +R A D + R A++ +G +I ++ + Sbjct: 262 QLPAVNQFLSSRITSAAEDGGA-----------GRTAIWTVGWHIAQQNLIFGHGLGTFT 310 Query: 314 ESMNLLVAEHNRLRGALEFSNVH---LHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 +A + L + HN +E S GL+G+ L + L ++ ++ Sbjct: 311 TLFGQGIAAESDLESIDTYYITDGRGAHNIYLELVSEVGLVGLGIFLAWMWVLLQVSLRQ 370 Query: 371 RALGLLILTL 380 LIL L Sbjct: 371 AVHPDLILIL 380 >UniRef50_D2RIJ5 O-antigen polymerase n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RIJ5_ACIFE Length = 399 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 95/291 (32%), Gaps = 26/291 (8%) Query: 111 KIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTAT 170 + +F +VF+ L + + + FL ++ + NDR G+ Sbjct: 97 RFVVFLPIVVFIKKRDYLINMLTAYMAVFGVDCFLTLIQVLFH--LGNNDRGWGLGGSQL 154 Query: 171 GAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLAL--TQTRATLLLFPIICVAA 228 G A ++ ++ + IL + + + + L ++R L + + Sbjct: 155 GIASIMCMMLPITFIIILDSSFEKRLKNVARVTLICNWIGLFCNKSRGAWLSN--MILVP 212 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGAR 288 + A+ K +++ + + + + ++ + R+ S N + S G R Sbjct: 213 VSAWNYIKHSKKALAVIAVFFLASGVFMVSSPKYLKRFE-------SIANTTTDRSNGDR 265 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLK 348 + ++ + + P + + + H H+ + Sbjct: 266 IVAWKSCIQMVKDHPLTGIGLGRWGKVYGTQYWTPEDTQKL-----PHAHSNYFHILAET 320 Query: 349 GLMGIFSTLFLYFSL----FYIAYKKRALGLLILTLGIVGIGLSDVIIWAR 395 G++G+ L+ F K + L+ + +G V+ + + Sbjct: 321 GIIGLLGLLYFTVYFVSRSFINWKKNKNPYDLMACISFLGY----VVFFGQ 367 >UniRef50_A6WWI6 O-antigen polymerase n=2 Tax=Ochrobactrum RepID=A6WWI6_OCHA4 Length = 419 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 84/263 (31%), Gaps = 11/263 (4%) Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATG 171 + + F L + L+A SI + RI G A Sbjct: 92 YTLLITIFAFAGSGMVLIRDPLRAYVLGARVGTLLAVIIAVCLSIVDGGRIGIGGNQA-V 150 Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 A+ + I + + + T + + ++TRA +++ PI ++ Sbjct: 151 FAFVAGVAAISAAIPLRNT-SRYLPNGPHWLVLGFAAVLTSETRAVIVVLPIFVAVEILI 209 Query: 232 YYNKSPKK---FTSSIVLLIAILASIVIIFNKPIQNRYNEALN--DLNSYTNANSVTSLG 286 + + + +I+ +V I R++ + D + S Sbjct: 210 FLKRFSIRQQGAAYAILFAATAALVVVGPVGSIISKRFSGMVEYYDTGRAADWEDKISAD 269 Query: 287 ARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGS 346 R M++ + PF+ + S V + + H+HN I++ Sbjct: 270 IREVMWKSASRVIATHPFTGVGS----YSKMDFVKAEAGDKATMLNGFRHVHNTILDELL 325 Query: 347 LKGLMGIFSTLFLYFSLFYIAYK 369 G++G+ + S+F ++ Sbjct: 326 NDGIVGLIFMAGAFISIFVYLWR 348 >UniRef50_A5FG38 O-antigen polymerase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FG38_FLAJ1 Length = 773 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 64/407 (15%), Positives = 129/407 (31%), Gaps = 47/407 (11%) Query: 33 MIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAF 92 + ++ ++ F I Y T ++ L R + L L+ L+ + L + Sbjct: 51 LYLSVINLIFGIYFYFNTNVLSNTVFSLLKRSYIFR-----LYLAFILLCGISLF---SA 102 Query: 93 KVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMY 152 K + F +I I + LT+ + K + + +S Sbjct: 103 KNSSLVFT-------KFTEIAIVFCLFINLTILLKDKFDLLYKIVLIIGISAFFQSLQQL 155 Query: 153 INSIHENDRISF---------GVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC 203 N + S G A S + + I + F + Sbjct: 156 QNFLIIPKNTSIMDLLWSMKGNTGNINILAASLTIKIPFLLLGITHFNSYKKIFFTVTLF 215 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSI-VLLIAILASIVIIFNKPI 262 +V+ V+ LT R L+ +I ++ ++ I ++ + + +++ I Sbjct: 216 SVVSVIFLTGARTPLINLFLIFFIYIVYLLKENTFSKPGFIKIIYLIVPVLCAVLYTNSI 275 Query: 263 ------QNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 NRY N + S ARL + + K+P + Sbjct: 276 FEKSKDNNRYVALENRIERINAE--DNSSKARLTFWGNAFEMIKKNPILGIGLGNYQIES 333 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK------ 370 + ++H HN+ IE + G++ L ++ +F I K Sbjct: 334 IPYEKTTSYD----LIVSLHAHNDFIEISAETGIINGLIYLSIFILIFSINLKNVLKSND 389 Query: 371 --RALGLLILTLGIVGIGLSDVIIW--ARSIPIIIISAIVLLLVINN 413 L L+ + ++ G+ + + R I S I+ V+NN Sbjct: 390 SHTRLTALLTLMLVIVYGVDSLFNFPMYRPTMSIFFSLILAFTVLNN 436 >UniRef50_Q2P774 Membrane protein n=23 Tax=Xanthomonadaceae RepID=Q2P774_XANOM Length = 444 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 80/227 (35%), Gaps = 11/227 (4%) Query: 135 VLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH 194 + + + + LI+G+ + GV + L +S +L + H Sbjct: 155 LFFGIDQIKQLISGHGLCTAQELALVDRLSGVLGPCNLKFGQTLAS-LSPFLLLALGRRH 213 Query: 195 PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASI 254 + + + + AV VL L +RA+ + + V L++ + + + + A+LA Sbjct: 214 VWAWAVGAAAVGIVLVLAGSRASWITY---GVIVLLSGWQLLGGRRLLVVAVAGALLAIA 270 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 V+ + R + +L R ++ L + PF+ A Sbjct: 271 VVAVAPQARERIQRTTLAFGNGEQG-VDQALSGRAQIWGAALCMIRAHPFNGVGARGF-- 327 Query: 315 SMNLLVAEHNRLRGALEFSNV---HLHNEIIEAGSLKGLMGIFSTLF 358 + A + A + H H ++E + G++G+ L Sbjct: 328 -RHAYPACNPAPGQAPAWGGGPAFHAHQIVLEILAETGVIGLLLWLA 373 >UniRef50_C3WC59 Predicted protein n=3 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WC59_FUSMR Length = 413 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 101/281 (35%), Gaps = 24/281 (8%) Query: 104 HSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINS-IHENDRI 162 + + + S +F+T +K L++L I G Y + N R+ Sbjct: 84 RALEKSYRYLPIFSIPLFITSERVIKI--ILSLFSLSIFISFINGIFFYKKLKWNFNARL 141 Query: 163 SFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF----LFLLNSCAVLYVLALTQTRATL 218 A+ + ++ I+Y K + ++LL L L +TQ R Sbjct: 142 ISFSSHPLDEAHILAMGSLLLLALIIYNIKFKKYKELPIYLLAFILALIALVMTQGRGAW 201 Query: 219 LLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTN 278 L F + ++ + KK V+L+ +L + NRY + + + Sbjct: 202 LGF--LGGLFVVVFLLMKNKKLFIVGVILVGVLGVGAVTSKGLENNRYIKRFESIQNLE- 258 Query: 279 ANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALE------- 331 TS RL M+E +++F + ++ ++ + ++N+ Sbjct: 259 ---DTSNKIRLFMWESSIDMFKNNLPFGVGRDNASKYALEYMEKNNKYDEMEHKWAKSHL 315 Query: 332 ---FSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 + +LH+ + +G++ F + ++ + Y ++ Sbjct: 316 KQIAGSGNLHSMYFTTLAEEGIL-AFPFIGMFLFILYRQFR 355 >UniRef50_B9XBG9 O-antigen polymerase n=1 Tax=bacterium Ellin514 RepID=B9XBG9_9BACT Length = 621 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 129/347 (37%), Gaps = 51/347 (14%) Query: 103 YHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYS-LSFLIAGYAMYINSIHENDR 161 Y + +I ++ +F+ + L + + + + L LI+ YA+Y + ++++ Sbjct: 90 YVARQELIRILVY-AFLFLIVLNNLHRQELTQIFALAVIFLGMLISFYAIYQ-YVAKSNK 147 Query: 162 ISFGVGTATG------------AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC--AVLY 207 + V TG A Y ML+ + +L + +H L A+L Sbjct: 148 VWTAVSPYTGRAGGTFIYPNNFAGYLEMLLPV-GLCYVLAGRFSHVMKIALGYACVAMLA 206 Query: 208 VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFN-KPIQNRY 266 + +T +R L+ + A + + + ++L + ++ +V+ + + R+ Sbjct: 207 GIGVTMSRGGWLVAGVTLAALCGVLLTQRNFRIQALLLLALLLIGGMVMAPRLRSMNARF 266 Query: 267 NEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 N++++ + R ++++ ++ + + + Sbjct: 267 A------NTFSSGRAD---DLRFSIWKPAYRMWQDHFWLGVGPDHFDYVFRIY------R 311 Query: 327 RGALEFSNVHLHNEIIEAGSLKGLMG----IFSTLFLYFSLFYIAYKKRAL--------- 373 ++ HN+ + + GL+G + + + LY ++ R + Sbjct: 312 PEDVQLRPGRAHNDYLNTLADWGLVGTIIVLAAWILLYAGVWKSWRAVRGVQDDFSRKKS 371 Query: 374 ----GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 ++ +LG+ + L + + P + I AI L+ ++++ Sbjct: 372 NKYAFVMGASLGLFAVLLHATVDFNLHTPAVAILAISLMAILSSHLR 418 >UniRef50_A4BMB8 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMB8_9GAMM Length = 417 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 63/187 (33%), Gaps = 17/187 (9%) Query: 193 NHPFLFLLNSCAVL--YVLALTQTRATL----LLFPIICVAALIAY--YNKSPKKFTSSI 244 L L VL + + ++TR+ + P + + Y + ++ Sbjct: 175 RWALLGYLLVVIVLGGFGVLFSKTRSVWAISVIAIPAVAMLTAWPYTPRRRLSVVMVAAA 234 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSV----TSLGARLAMYEIGLNIFI 300 + + I F + R+ + S+ ARL M GL +++ Sbjct: 235 CIAGIFVLGIGWAFEGVVSKRWVATEATFWMLIQGDWSQLPFNSVSARLQMAREGLQVWL 294 Query: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 + PF S + EH+ + H HN + + GL+G+ + L+ Sbjct: 295 ERPFLGHGFGSAPYFL-----EHSTFKEVAVRHFEHFHNTPVNLLAEFGLVGLAFFVVLF 349 Query: 361 FSLFYIA 367 ++ + Sbjct: 350 WASVFFL 356 >UniRef50_A3EV53 Putative O-antigen polymerase n=2 Tax=Leptospirillum sp. Group II RepID=A3EV53_9BACT Length = 453 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 58/321 (18%), Positives = 116/321 (36%), Gaps = 29/321 (9%) Query: 100 RATYHSYLNTAKIFIFGSFIVFLTLTS--QLKSKKESVLYTLYSLSFLIAGYAMYINSIH 157 R + + + FG+ + + ++ +L TL IA + S Sbjct: 115 RGFWGDFEALMGVLFFGASVALRKWSGIPRIWMTGALLLGTLAGAGVGIARIVIEHRSFL 174 Query: 158 ENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYV-LALTQTRA 216 + TA A ++I + + KKN LFLL+ VL + L LT++R Sbjct: 175 GMMNLGDKNSTAQFLAILMVIILFLGIDGLQREKKNRFSLFLLSVLPVLAIFLFLTRSRT 234 Query: 217 TLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY 276 L+ P+ + +I I+ + A+ A V I ++ + Sbjct: 235 FLVAVPLAFLLMIILAKAWRVLIVLGGILGIGALAAYFVPI-----------LRWEIATL 283 Query: 277 TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVH 336 + S S +R +E + ++ PF ++ +A + L E+++ H Sbjct: 284 PHPTSDGSFTSRYPTWEGAIRMWKSHPFLGVGPDNFH------MANIHALYHLPEYAS-H 336 Query: 337 LHNEIIEAGSLKGLMGIFSTLFLYFSL---FYIAYKKRALG-----LLILTLGIVGIGLS 388 HN G +G+ + + + + LG L L ++ +G Sbjct: 337 GHNLFFNLLGEYGSLGVAAFALWLAVWCRDVFAGLRTKRLGNSHAALCAGILVLLFVGGI 396 Query: 389 DVIIWARSIPIIIISAIVLLL 409 +W S ++++ ++VL L Sbjct: 397 AHPMWGGSTSLMLMLSMVLSL 417 >UniRef50_A6GLX2 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLX2_9BURK Length = 407 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 56/322 (17%), Positives = 113/322 (35%), Gaps = 19/322 (5%) Query: 75 PLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKES 134 PL + + L L+W S S + + YL+ + FI L L ++ Sbjct: 57 PLLLLGVSLASLLWISVAWTKGSVDDSMH--YLSKYSTLLMAPFIFGLFLVYPKAIRQVL 114 Query: 135 VLYTLYSLSFLIAGYAMYI------NSIHENDRISFGVGTATGAAYSTMLIGIVSGVAIL 188 + L + L+ Y +++ N+ D V + +G+ A+ Sbjct: 115 FAFVLSAWLTLLLSYGIWLEVPVLLNAFPLVDPSYPTVFKLHTTQSIVLCLGLYFSWALA 174 Query: 189 ----YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSI 244 L L VL V L + + + + L+ + K K Sbjct: 175 MGEANPASKKKLLALAAVFTVLTVFNLLNMTHARIGYVSLVLPLLVYLFMKFSWKGGLIA 234 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYT-NANSVTSLGARLAMYEIGLNIFIKSP 303 + + AI+A++ ++ + +R ++ N++ +++ + T +GARL+ + I L IF + P Sbjct: 235 LAIAAIVANVAYFGSETVSSRVDKTYNEVVNWSPDKYENTDMGARLSWWHISLQIFREHP 294 Query: 304 FSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSL 363 + H + G +N HN+ + GL+G L + + Sbjct: 295 VVGAGVGAYPSEFLK----HAQPMGVPPHNNP--HNQFFLLLTQIGLVGPLLFLAILIAH 348 Query: 364 FYIAYKKRALGLLILTLGIVGI 385 + Y+ L Sbjct: 349 YLSIYRLTEPERLASAALFAVF 370 >UniRef50_Q1NRK6 O-antigen polymerase n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NRK6_9DELT Length = 436 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 47/374 (12%), Positives = 123/374 (32%), Gaps = 24/374 (6%) Query: 51 AIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPF--RATYHSYLN 108 A+ L+ ++ R+ + ++ L I L I A + + Sbjct: 38 AVAGLVLMVRHRRELWQRQEVVLFSLLFAAIWLPMAISLIGAVNPEKTLSTTAAFLRFYP 97 Query: 109 TAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGT 168 I + +++ L +L + GY + R++ G+ Sbjct: 98 AGIFVILTLAVAGAPAKLLRILAWVLLIWVLDALLQAVTGYNSL--GYPQPGRVNGFFGS 155 Query: 169 ATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLA-LTQTRATLLLFPIIC-- 225 M + +S + +++ + P + + A + + ++ TR + ++ Sbjct: 156 GIHFG---MFMATLSPLLLVHAYRKWPLPAQIATLAGVASVIFMSGTRGGWVSLAVVLGG 212 Query: 226 --VAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN--S 281 V L ++ V++ ++ + + +R ++ + ++T Sbjct: 213 LAVWVLWREGVRASLPRLVVAVVVFGLVGAGTLYCFPQFSDRVDKT---MLAFTGDTELL 269 Query: 282 VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEI 341 +L RL ++ G+ + P + A + + + + G + H H + Sbjct: 270 DKALSDRLPIWSTGVKMIQAHPLNGVGARNFRYAYDEFAEPDDYWAGE-GVTAAHAHQIV 328 Query: 342 IEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVII----WARSI 397 ++ S G++G+ L + + L A+++ + L L+ V + Sbjct: 329 LDVASETGVVGLGGFLVVVW-LLARAWRRADPHTRQIMLPYALALLT-VFFPLNSHYATY 386 Query: 398 PIIIISAIVLLLVI 411 S LL + Sbjct: 387 STAWSSTYFWLLAL 400 >UniRef50_B4AYT6 O-antigen polymerase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AYT6_9CHRO Length = 857 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 100/289 (34%), Gaps = 24/289 (8%) Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTAT-GAAYSTMLIGIVSGVAILYTKKNHPFLFL 199 ++ +I + N E+ R + +G A Y +++ + Y + Sbjct: 143 VIASVIGLMVWWQNYTPEDPRNGWPIGHPNFLAGYLLLVLPLT-----FYWGVDQKGWRR 197 Query: 200 LNS----CAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP---KKFTSSIVLLIAILA 252 L + +L+VL T +R L ++ V +++ + +S + +V + + Sbjct: 198 LAAWGASLLLLFVLYTTSSRGGFLGLFVLIVVSILFWLLQSHPSQRIRRLLMVGVALVAV 257 Query: 253 SIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESR 312 ++++ N +Q + + RL M+ IF P + Sbjct: 258 VVILLSNPRVQQIIHLSSPQNTPAVQVTVDGESQERLYMWRSAWQIFKAHPLLGIGPGNM 317 Query: 313 AESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFS---LFYIAYK 369 A +L G L + LH+ I GLMG+ + L L+ Y+ Sbjct: 318 ARVYDLY---RPVEAGLLLINLQELHSTPIHITGELGLMGLAAYLLFLGCCTRLWIRLYR 374 Query: 370 -----KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 K L + ++ +S + + I ++ I L+ ++ Sbjct: 375 HCTEPKNRYLLYGIGSSLLAYTVSSLTDYQLDNIAICVTLIALIALLIR 423 >UniRef50_C6HYN6 O-antigen polymerase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYN6_9BACT Length = 544 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 91/267 (34%), Gaps = 9/267 (3%) Query: 111 KIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR------ISF 164 K + + FLT + + ++ + + + ++ G+ Y ++R Sbjct: 171 KRWFDPLMVFFLTSYLVQEEEDAKMILYMMAFTLVVIGFGTYWQRHELDNRSHYVRLTGL 230 Query: 165 GVGTATGAAYSTMLIGIVSGVAILYTKKNHPF-LFLLNSCAVLYVLALTQTRATLLLFPI 223 T A+ ++ G ++ K LF + L L+ TQ+R L F Sbjct: 231 AGQANTMGAFYANYAFVMIGYLVMKGMKRIRRSLFFIGIVGCLLGLSATQSRGDALGFVG 290 Query: 224 ICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVT 283 + + + S++V + + + ++ + D Sbjct: 291 GMMVFFLLRSRLQFVIYVSAVVFIAYNPQYLPGGLKQRVERTVQQQSGD-GLDKKTQLDA 349 Query: 284 SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIE 343 S RLA+++ + + ++P + + V + G LE HN + Sbjct: 350 SARTRLALWKGAIRMIEENPVMGVGYKMFQTYIFSYVDHNEETAG-LELKGRDGHNAYLM 408 Query: 344 AGSLKGLMGIFSTLFLYFSLFYIAYKK 370 G+ G+ + L + +F IA++ Sbjct: 409 IGAEMGIPALLVFLSILVFMFRIAWRS 435 >UniRef50_C5S7S9 O-antigen polymerase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7S9_CHRVI Length = 455 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 81/239 (33%), Gaps = 20/239 (8%) Query: 189 YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLF-PIICVAALIAYY--------NKSPKK 239 + ++ L+ L +L L L+Q+R + L F + V ++ + ++ Sbjct: 191 WPRRLGVILWALWLLFMLEGLLLSQSRGSWLAFISALTVLVILEWRGYSAAKGARLRHQR 250 Query: 240 FTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVT----SLGARLAMYEIG 295 + + ++ IL ++ + +Q R++E + L + T +G R Sbjct: 251 YWLVLPVVGVILLGGLLAQTQTVQKRFSEHTDTLIDIVRGETATVESDPVGLRFKALLFA 310 Query: 296 LNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFS 355 +I+ + P+ A + E + HLHN E G +G+ Sbjct: 311 RDIWGERPWFGWGAGTSRELIAASGRPEALFDQD--HWLPHLHNTYAEILVQFGAVGLTL 368 Query: 356 TLFLYFSLFYIAYKKRALG-----LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 L + L +K G L L L + R + + +L+ Sbjct: 369 IAALVWVLARSGFKAGRAGRLPADLGRFYLVAFVFVLIWCLFNYRVVRTDWLFFWILVA 427 >UniRef50_C8QZX5 O-antigen polymerase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZX5_9DELT Length = 483 Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 69/196 (35%), Gaps = 27/196 (13%) Query: 212 TQTRATLLLF----PIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI---IFNKPIQN 264 T+TR P++ + A + ++ + ++V I ++++ +++ Sbjct: 247 TKTRTGWFAVAAALPVVLLLATWHFRSQLLARNAVALVPAIVAGLALLLTVAFGWGILES 306 Query: 265 RYN---EALNDLNSYTNAN-----SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 R + + + +L + S +SLG R A L ++ P+ + Sbjct: 307 RVSSQWQTMGELVTLPQGGNIEEISDSSLGVRAAYAHFALERVLERPWFGFGPAEPYYLL 366 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK------ 370 + LE H HN +E G++G L + + +++ Sbjct: 367 QK-----RPIPWQLEGRTGHFHNGHLEIMVRFGVVGYMLVLAFVSLMLHEGWRRLAEPND 421 Query: 371 -RALGLLILTLGIVGI 385 RA L + +G + Sbjct: 422 GRARALALFGIGFIVF 437 >UniRef50_C7LP51 O-antigen polymerase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LP51_DESBD Length = 398 Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 85/244 (34%), Gaps = 14/244 (5%) Query: 175 STMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYN 234 GI S ++ + + + + + LT R+T + + A + Sbjct: 154 VLASFGIFSLISFPHPQPTIRRIGYALMAILGIAILLTVGRST---YLGLAAALGLFALL 210 Query: 235 KSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEI 294 +S K +V+ IA+ A + Q R + L + N RL + I Sbjct: 211 RSWKLAVGGMVVAIAVGAMALPFMAPDAQKRITGMV--LAPHKEPNFQN----RLPTWSI 264 Query: 295 GLNIFIKSPFSFRSAE-----SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKG 349 G+ F +SP SR+ + AL+ + H HN I G Sbjct: 265 GIAGFKESPLFGNGLRTFETYSRSYLDKHYLEIKKNNPYALDKAFAHPHNSYIAIIYGWG 324 Query: 350 LMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 ++G + K+ L +L T I+ GL DV +R + + I + + Sbjct: 325 IVGFIFIFLILALSLSTTKKENKLLILYCTTFILAFGLFDVRFLSRDGALFFLFPIGMAV 384 Query: 410 VINN 413 + +N Sbjct: 385 INSN 388 >UniRef50_Q1PVJ3 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVJ3_9BACT Length = 943 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 62/461 (13%), Positives = 155/461 (33%), Gaps = 63/461 (13%) Query: 19 MILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVC-LLSLILRGRQENYNIKNLILPLS 77 ++L + I FF + + V + + + +I ++ IL + +++ ++ + Sbjct: 19 LLLAAVVIIPLFFDIRLYSVFDLSKVAVLYFFSIATLVIWTILLTVKHDFSFSHVSINTP 78 Query: 78 IFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLY 137 I + +I + TY + + F+ ++T+ + +L Sbjct: 79 ILAYIAIFIIATTVSINPVMSLFGTYKRF-EGLAATLCYIFLFYVTIHFITTRTRLYMLL 137 Query: 138 TLYSLSFLIAG-YAMYI-------NSIHENDRISFGVGTATGAAYSTMLIG--IVSGVAI 187 ++ LI+ Y ++ R+ G A +++ +VS I Sbjct: 138 ISMAVCALISSIYGIFQRCGVDYFTWSSSGPRVFSTFGNPVFFAAQLVMVLPVVVSLFFI 197 Query: 188 LYTKKNHP-----------FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKS 236 + +K + F + S + LT TRA + V L + K Sbjct: 198 GFKEKEGKDGIFINNRYAIWSFYVVSVIIYIAFWLTNTRACFVALLGGIVPFLFFIFIKR 257 Query: 237 PKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN---------------- 280 + ++L+++ + KP + D+ + +++ Sbjct: 258 STERYPFLILVVSFFIIGIFFNVKPETSFIKHFAADVQNEKDSSDFFIDKEAEEKSISRK 317 Query: 281 ---------SVT-SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNL-LVAEHNRLRGA 329 SVT S +R+ Y + I P ++ L + L Sbjct: 318 PRPWIAGKFSVTGSSFSRIFQYLAAVEIIKDYPALGIGPDTIGIVFQKNLAKVFSVLEED 377 Query: 330 LEF---SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSL-------FYIAYKKRALGLLILT 379 F +HN+I++ +G++G+ + ++L + + + + +L L+ Sbjct: 378 NGFQFPRQDRIHNDILDTAVTRGILGLGTYVWLLTAFGVYVGRNYRRLNNRDKILILGLS 437 Query: 380 LGIVGIGLSDVIIWARS--IPIIIISA-IVLLLVINNRNNT 417 GIV + + + + + + + + + ++ N Sbjct: 438 SGIVCYLIQNQFSFGNTPIVTLFWVMMGLCISIIKINTAEG 478 >UniRef50_Q7NME7 Glr0819 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NME7_GLOVI Length = 467 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 81/250 (32%), Gaps = 22/250 (8%) Query: 159 NDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATL 218 DR++ T AA +L+ V+ L + L AV L T +R Sbjct: 192 LDRVTAFFAWPTSAAAYFLLVLPVALSTALGGEARLRPLAWAAFGAVGIALVGTASRNAW 251 Query: 219 LLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK-PIQNRY--NEALNDLNS 275 ++ + VA L+ P ++ +A+ ++ + R + Sbjct: 252 IIALLASVALLVVARRLVPVLSLAAAAAAVAVAGLGPTEWSVVELLRRVVPAALWQKVAE 311 Query: 276 YTNANSVT--SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFS 333 + + + SL R ++I + + P++ ++ V R A Sbjct: 312 SVTSGTASFESLINRFDAWQIAFEMTRRRPWTGWGLQTFP-----FVESEIFGRDAANLL 366 Query: 334 NVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL----------GLLILTLGIV 383 H HN + + GL + Y + ++ + GL+ + Sbjct: 367 --HAHNLYLTYSAETGLPAALLLVGFYLWTLCVGVQRAVMLKGVARWQLAGLVAALASYL 424 Query: 384 GIGLSDVIIW 393 GLSDV + Sbjct: 425 LFGLSDVPFY 434 >UniRef50_B2SCS0 Blood group Rhesus C/E and D polypeptide n=35 Tax=Brucella RepID=B2SCS0_BRUA1 Length = 441 Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 84/237 (35%), Gaps = 16/237 (6%) Query: 178 LIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP 237 ++ + + + ++ LL + L ++ T ++ T+ L P + ++ Sbjct: 195 VMAVFAFAGLYLWRRGWKTSGLLIGLSALGFVSQTGSKTTMALVPFAMLLVVLP--GLMG 252 Query: 238 KKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLN 297 + ++ ++ LA IF + + ++ + + R+++++ L Sbjct: 253 LRKLTAGLIFAIQLAFATFIFGVVLFEPIRRLVENM------DVDATFTGRVSIWKFALE 306 Query: 298 IFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTL 357 K P++ ES S A VH HN ++ G+ + + Sbjct: 307 ALSKRPWTGYGYESFWSSAYARHAARPYYLDWDVRGIVHGHNSYLDVAMTMGIPALLCAI 366 Query: 358 FLYFSLFYIAYK-----KRALGLLILTLGIVGIGLSDVI---IWARSIPIIIISAIV 406 + + + Y + + L L IV G + + + R + + ++ I+ Sbjct: 367 AVIIVMPLVHYARCRPVRENMLLADFFLMIVLFGTLNAMMESFYFRRMDPVWLTLIL 423 >UniRef50_Q4KJB3 O-antigen polymerase family protein/toluene tolerance protein n=2 Tax=Pseudomonas fluorescens RepID=Q4KJB3_PSEF5 Length = 620 Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 117/369 (31%), Gaps = 44/369 (11%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGR--QENYNIKNLILPLSIFLI 81 I Y+L +M + Y + +I L++L R + I L Sbjct: 24 IGYLLLLCAMFFLPGRSGLHKLYYGLFSIPTLIALCTRPSELKSLLREPVFIAMLLFCTW 83 Query: 82 GLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYS 141 ++ L W + H+ + +F ++ + ++ + Sbjct: 84 AIVSLAWSPPVDSVLGEIKTPLHT------LMLFAGCMLLVRYRGEVLQPLVFCAAIVAL 137 Query: 142 LSFLIAGYAMYINSIHENDRISFG-VGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL 200 ++ + Y E I G +++ + + + + L+L Sbjct: 138 IASIFNLYVFVRYHTPELRMIGAGAFDNPLLSSHVFGFFCVYWLCLSMNCR-RYQILWLS 196 Query: 201 --NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIF 258 ++ L T +R L+ + +AAL + ++ + ++A ++V +F Sbjct: 197 VPALVIMVAALIATGSRTPLVA---LTLAALWLSFISWNRRSLMLLGGMLAGGIAVVALF 253 Query: 259 NKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNL 318 ++ + R +S R ++ + L P+ Sbjct: 254 SQMLLER---------------GSSS---RFDLWRLALEQIANHPWIGHG---------- 285 Query: 319 LVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLIL 378 L + F HN + G++G+ LF+ + +++ RA LLIL Sbjct: 286 -YNASLSLDPGIGFLLQEPHNFALGVLYYVGIIGLLPWLFMQAWALFKSWQLRAEPLLIL 344 Query: 379 TLGIVGIGL 387 + G+ Sbjct: 345 ASTWLMFGI 353 >UniRef50_B5YEZ0 Tetratricopeptide repeat domain protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YEZ0_DICT6 Length = 867 Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 57/408 (13%), Positives = 135/408 (33%), Gaps = 56/408 (13%) Query: 49 ITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYL- 107 ++ + + + ++ N K + + +FLI W + + + + + SY+ Sbjct: 61 FALLLWAIWVYVSRKELNLPPKVISASVFLFLIS-----WIISTIFSTNFYLSFFGSYMR 115 Query: 108 NTAKIFIFGSFIVFLTLTSQLK--SKKESVLYTLYSLSFLIAGYAMYINSIHEN------ 159 + F F++F L + ++ ++ + +T++ + ++ + + Sbjct: 116 QMGFLTYFFYFVIFFLLYNVVENYTELKYFYWTVFITTVIVDFFGILQLYRLMPWYERVR 175 Query: 160 --DRISFGVGTAT-GAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRA 216 RI +G A + M++ I+ L + A VL + TR Sbjct: 176 TESRIIATLGHADFLGHFLVMVMPIILSFIYYVKNNVLRVLLYVLFLASFLVLLGSYTRG 235 Query: 217 TLLLFP--IICVAALIAYYNK---SPKKFTSSIVLLIAILASIVIIFNKPIQNRYN---- 267 + + F II + + K + K ++ L++ + ++ I + + Sbjct: 236 SWVAFLAGIIIYYVFVLWKEKGFFTKKNKIITLALVLGLALTVGIFYITENKLYIEKKDV 295 Query: 268 ---EALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF------SFRSAESRAESMNL 318 S VT R+ + + +F E+ + + Sbjct: 296 GLFSLKERFESIGAGLRVTQQNPRILTWRDSIRLFEDKILKSPRIIYGLGPETFSFNFTP 355 Query: 319 LVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG---- 374 + + HNE ++ +GL+G+ S +F+ S+F + K Sbjct: 356 YKSLDLARYDGGKGYPDREHNEFLDILFPQGLLGLLSFIFVLLSVFLYSIKNYNKIGAEN 415 Query: 375 -----------LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 L L G+V GLS ++ + ++L Sbjct: 416 RILFLGTLIGWLSFLIQGLVLFGLSATYLY------FWMLTSFIMLFF 457 >UniRef50_A8EVT1 Putative O-antigen polymerase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EVT1_ARCB4 Length = 445 Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 89/254 (35%), Gaps = 7/254 (2%) Query: 135 VLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH 194 + + + I Y +Y + + A ++ V + Sbjct: 139 IHFQIIPPELFIGEYKVYQTVYTDPAPFLNHIKHNIALAIVISVLIYRLLVNDIKNIYLK 198 Query: 195 PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASI 254 F+ + A + + + ++LF +I + + Y K K F S+ +++ + + Sbjct: 199 ILSFIFITTAFINMSLIGGRTGYIVLFLLIFLVVFLVYRQKIKKVFFISLSIILIMFMYM 258 Query: 255 VIIFNKPIQNRYNEALNDLNS-YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 F++ R +A ND+ S N +S+G R+ + + + Sbjct: 259 Y-NFSEQFDKRVEDAKNDIKSMINEKNYDSSIGLRIIASYYTIEVIKDNYLVGVGTGDVM 317 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY--KKR 371 + + L + S HN ++ + G++G F + +++ + KKR Sbjct: 318 QEIEKLSKDKESYIVERVKSP---HNVYLQVLAQVGIIGFFIMMLMFYKILTYKTLDKKR 374 Query: 372 ALGLLILTLGIVGI 385 + ILT+ + Sbjct: 375 DDIIKILTIATLIF 388 >UniRef50_A1K7Y0 Hypothetical membrane protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7Y0_AZOSB Length = 428 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 51/319 (15%), Positives = 106/319 (33%), Gaps = 27/319 (8%) Query: 110 AKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTA 169 ++ + ++ L S+ + + + A A + +R S G A Sbjct: 99 GRLLLAIGIMLAL---SRCGLPAHWLHHGCLVGCYAAAAMAAWQVEWLGMERAS-GPMNA 154 Query: 170 TGAAYSTMLIGIVSGVAILYTKKNHPFLFLL-----NSCAVLYVLALTQTRATLLLFPII 224 + ML+G + L L + A LY + +R + P + Sbjct: 155 IPFGNNAMLLGFFAAAGWLAQPAQQRGTPLTLVTAGATLAALYASFASGSRGGWIAIPAL 214 Query: 225 CVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSV-- 282 +A + +A+ + V E L+++ + Sbjct: 215 AWILALAAERTRRSHRLAYAATALALTVATVAAVPALHARSVAEIDAVLHAWHATPAEAA 274 Query: 283 ----TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLH 338 +S+G RL +Y +GL+ F+ P S A + ++ HLH Sbjct: 275 RMELSSVGTRLQLYRLGLDAFLAHPLSGIGYGQLAPWLAAQAQAGLLPPDFARYT--HLH 332 Query: 339 NEIIEAGSLKGLMGIFSTLFLYFSL---FYIAYKK-----RALGLLILTLGI--VGIGLS 388 + +I+ + G++G+ + L L F ++ RA L L + + L+ Sbjct: 333 SGLIDTAARGGVLGLLALGGLLGGLGRYFARGLRQPDAEARAFALYGLLATVAALLFSLT 392 Query: 389 DVIIWARSIPIIIISAIVL 407 +V A I++ + + Sbjct: 393 NVFFPAIVGTNILVLTLAV 411 >UniRef50_C9LPH8 O-antigen polymerase family protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LPH8_9FIRM Length = 407 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 76/256 (29%), Gaps = 16/256 (6%) Query: 118 FIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTM 177 + + L + ++ ++L+ + I +G G+ A M Sbjct: 100 IFLLIVLFVRKRTYLTNMLFAFLLFFGADSLLTFIQVYILHLTDRGWGFGSNMLAIAGIM 159 Query: 178 LIGIVSGVAILYTKKNHPFLFLLNS---CAVLYVLALTQTRATLLLFPIICVAALIAYYN 234 + + +L+ ++ L + ++ L ++RA L I Y Sbjct: 160 CMVLPLCFVVLFDQRFDRKLKYASVWTMLSIFVGLLSNKSRAAWLTCLITTPVVTGKYIR 219 Query: 235 KSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEI 294 + K ++I N +R+ N + +N + RL M++ Sbjct: 220 DNIKYLAVVGAIMIGFCG--FFFANPSYISRFKSVTNTTTNTSNTD-------RLQMWQG 270 Query: 295 GLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIF 354 L ++ P H + + H HN + + G +GI Sbjct: 271 CLTMYKNHPVIGVGLGRFKPEYKEYAKSHPEIVR----TYSHAHNNFMHLLAETGTIGIA 326 Query: 355 STLFLYFSLFYIAYKK 370 L F + + Sbjct: 327 GYLIFIFYSLVHSLRS 342 >UniRef50_Q97GP8 Membrane protein of EXOQ family, involved in exopolysaccharide production n=1 Tax=Clostridium acetobutylicum RepID=Q97GP8_CLOAB Length = 406 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 34/262 (12%) Query: 159 NDRISFGVGTA-TGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRAT 217 R++ G T AA+ + I + A + + S ++Y ALT +R + Sbjct: 162 MVRVAAVFGNPNTLAAFMILSIFPIVMFAFFEKNLKKKAFYSILSVLIVYNAALTGSRNS 221 Query: 218 LLLFPI-ICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY 276 + + CV ALI ++L I+ +F + +R L S Sbjct: 222 YMGLALGFCVLALIYSIK----------LILPIIVLGGASMFLPQVTSR-------LRSI 264 Query: 277 TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVH 336 N N AR+ +++ L + P S + + + V ++ LR A ++S Sbjct: 265 DNKNLN---DARIKLWKTALKMIKDHPLSGVGNGNYIANYDAYVKQYPELRYA-DYSRFP 320 Query: 337 LHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA-----------LGLLILTLGIVGI 385 +HN ++ S G+ G + ++F Y LG + T + + Sbjct: 321 VHNSYLKIESELGIFGGIFFVATIVNVFLKLYNTYKKTDIKIKKAFYLGFIASTSAFLFM 380 Query: 386 GLSDVIIWARSIPIIIISAIVL 407 SD +++ SI + + Sbjct: 381 NFSDNLLFVPSITSFFWMFVAI 402 >UniRef50_A8F5A6 O-antigen polymerase n=1 Tax=Thermotoga lettingae TMO RepID=A8F5A6_THELT Length = 1028 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 42/293 (14%), Positives = 97/293 (33%), Gaps = 20/293 (6%) Query: 97 SPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSI 156 S + Y S +K I F+ F+ + YT S+ + G +I Sbjct: 103 SVLISLYISNRFKSKESITRLFLTFIATGVVVAIDAILNFYTGRSIFLGVVGEPFSRAAI 162 Query: 157 HENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLF-----LLNSCAVLYVLAL 211 + V + L ++S FLF ++ L + + Sbjct: 163 KSTIGNTIFVANYMTMLLVSCLYFLLSDNYGWKNLSRKGFLFVKIFSMVAFWLFLTTVVI 222 Query: 212 TQTRA----TLLLFPIICVAALIAYYN-------KSPKKFTSSIVLLIAILASIVIIFNK 260 +QTR+ + + + + + K ++ ++ +++++ Sbjct: 223 SQTRSEYISMIFSVAVFAILYFVYSRKTKTDDDVHNWKNLKKLLITILIFGVAVIMVIYN 282 Query: 261 PIQNRYNEALNDLNS-YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 + S ++ SV+S+ RL + + + ++ + + Sbjct: 283 TDNPLTGGGKVSVTSRFSAMTSVSSIDERLLAWLGAIYQWKENKLIGTGIGTYQIKAIDI 342 Query: 320 VAEHNRLRGALEFSNVHL---HNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 + + + R L + + HN+ ++ G+ G+ S L L SL A+K Sbjct: 343 LQDVMKDRPELLYGWNNFKRTHNDYLQVLGETGIFGLISVLLLMLSLIIYAFK 395 >UniRef50_A9A0F8 O-antigen polymerase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0F8_DESOH Length = 754 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 85/222 (38%), Gaps = 30/222 (13%) Query: 185 VAILYTKKNHPFLFLLNSCAVLYVLAL-TQTRATLL---LFPIICVAALI--AYYNKSPK 238 + ++ F+ L+ S AV+ + + +R +L + AL A+ ++ Sbjct: 224 LGFFEEEETPLFILLIVSAAVIAMSIFASLSRGGILSLCASMLFFALALFGRAFPDRRIN 283 Query: 239 KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNI 298 + S+++LL A++A++ + I NR+ + Y N S G R + L + Sbjct: 284 RRASAVLLLCAVIAAVTWFGWERIDNRFAKI------YAADNFTDSEG-RFHFWADSLKM 336 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 P + + + + H HN+ +E + G+ G+ L Sbjct: 337 VSDFPATGVGFGAFGNVIPAYQNRYLGRILD------HAHNDYLELLAEGGIPGVVLALA 390 Query: 359 LYFSLF----YIAYKKRALGLLILT-------LGIVGIGLSD 389 + LF + K++ +++ L I+ G++D Sbjct: 391 FFICLFKTVRKVLKKRKEPYTILVCAGTATGILAILLHGVTD 432 >UniRef50_A6LHH5 Putative membrane protein n=3 Tax=Bacteroidales RepID=A6LHH5_PARD8 Length = 602 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 101/336 (30%), Gaps = 31/336 (9%) Query: 99 FRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSK------KESVLYTLYSLSFLIAGYAMY 152 + + H K+ G +V L Q+ + S+ + L I G+ Sbjct: 84 YPYSIHP--EPEKLLFIGQMVVLWYLLRQVLHECPVLIGYFSMFFIATGLIEAIWGFRQL 141 Query: 153 INSIHEND---RISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVL 209 + N R++ + + V+ +L K + +L C ++ Sbjct: 142 QGWAYSNHSLFRLTGSFFNPGPYSGYLAITLPVALGILLEQSKRNMPYYLSMGCIGTAIV 201 Query: 210 ALTQ--TRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYN 267 L +R+ + ++ A + A Y K+ + I Sbjct: 202 VLPAGMSRSAWIAV-VVSCAWVYALYRLDRKQ------AATRLRQHKRWYIIGGILGGIL 254 Query: 268 EALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLR 327 + YT S R M++I K P + S + AE+ Sbjct: 255 LLGGSASLYTLK--KDSADGRFLMWKITTKAIQKQPITGTSLGGFPAAYAETQAEYMASG 312 Query: 328 GALEF------SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLG 381 A E + NE ++ G +GL+G+ + LFY K + + Sbjct: 313 KATEQEKLVAGCPEYAFNEYLQIGLEQGLVGLALFIGWLGLLFYKGIKNKRYACCGGLMS 372 Query: 382 IVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + S + +P + I L ++ + Sbjct: 373 LAIFAFSS---YPLQLPEFWVVLIFLGVMSVTPDKD 405 >UniRef50_Q2BMR7 Probable transcriptional regulator SyrB n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMR7_9GAMM Length = 598 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 84/243 (34%), Gaps = 13/243 (5%) Query: 163 SFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFP 222 + T+ +++ I S L ++ + Y ++L+ +R LL Sbjct: 177 QINIQTSFMVTMLVLILYIASSFTQSKISPAVTLLLIITAFFASYTVSLSGSRVGLLGIA 236 Query: 223 IICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSV 282 + LI+ + + K + ++ L+ + + + + + N+ + + Sbjct: 237 LSLPLMLISRWKELCTKKSI-LIGLLLTMCIGGFLGKEGVISTSNKIERSITNIGGMEGD 295 Query: 283 TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV----HLH 338 R +Y IF +SP S + + +G F + H H Sbjct: 296 ----IRWKIYIQSWEIFKESPLIGHGLGSFQKVFQER-RADIQTQGITSFGDAPRFSHPH 350 Query: 339 NEIIEAGSLKG---LMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWAR 395 NE I G ++GI + +LFY ++ L L L + I ++ + Sbjct: 351 NEFIFWLVEGGALSVIGILCAVAATLTLFYKLGWRKGLSLTALLIPITLHTQVELPFYIS 410 Query: 396 SIP 398 + P Sbjct: 411 NTP 413 >UniRef50_B0C275 O-Antigen polymerase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C275_ACAM1 Length = 868 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 43/319 (13%), Positives = 94/319 (29%), Gaps = 41/319 (12%) Query: 99 FRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMY--INSI 156 F Y A I + V + L+ ++ V + S ++ ++ + Sbjct: 107 FPNQARWYTGAALGGIAAIYCVNAWARTPLRRQRLLVTQGIVSAGLIVTSLGLWVSQTLL 166 Query: 157 HENDRISFGVGTATGAAYSTMLIGI--------------------VSGVAILYTKKNHPF 196 E +R+ A+Y+ + + + + T + Sbjct: 167 PELNRLQSLQKLGVQASYNFSTLELRNWAPFGHQNYVAGYLVLALPLLLGLGLTHLRWRW 226 Query: 197 LFLLNSCAVLYVLALTQTRATLLLFPIICV---AALIAYYNKSPKKFTSSIVLLIAILAS 253 + L L T +R L + V L + + + + I+ Sbjct: 227 WWFGCLGLGLIDLYTTSSRGGWLGLLVAGVYLGLVLFRQQGLNRRWLMGGTLASLGIVVV 286 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 +V N + ++++ S + RL + G N+ ++ P + S Sbjct: 287 LVFAN--------NRLSSQISNFLQGRSGGDMAYRLITHVAGWNMGLQQPVTGMGVGSVP 338 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK---- 369 + L + LH + + + GL G+ + L L + + Sbjct: 339 LAYQAYRPHWAGLEAEHAYQ---LHGTLPQIWAELGLAGMVPFVLLLGWLIWQGGRYMTQ 395 Query: 370 -KRALGLLILTLGIVGIGL 387 L L G++G L Sbjct: 396 ATVNLLPQSLLAGLLGYSL 414 >UniRef50_A6LK62 O-antigen polymerase n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LK62_THEM4 Length = 1070 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 115/355 (32%), Gaps = 40/355 (11%) Query: 52 IVCLLSLILRGRQENYNIKNLILP---LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLN 108 +L L + ++ + + F + +I DN + + + Sbjct: 38 AFSVLFTYLAAKVIKEKKISIYISPAHIIWFFFAISSIISSFNTLRDNPFY---FRQSFD 94 Query: 109 TAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEND-------- 160 +F + F + + K+ ++L + L+ L +N D Sbjct: 95 IGLYVLFNVLVAFYISSEYNEKKRINILLFTFMLTGLFISIDALLNFYIGYDIFLGKVGQ 154 Query: 161 -----RISFGVGTATGAA-YSTMLIGIVSGVAI--------LYTKKNHPFLFLLNSCAVL 206 I VG A Y ML+ I + + L++ L Sbjct: 155 PLSRGSIKASVGNVIFVANYIDMLLPIALYFLLAYDLGVKKFWQVSLIKLSSLVSFILGL 214 Query: 207 YVLALTQTRATLLLFPIICVAALIAYYNKSP--------KKFTSSIVLLIAILASIVIIF 258 + ++QTR+ L ++ V +I Y+ KK T+ +++++ I++ +++ Sbjct: 215 MAVIVSQTRSEYLAIIVMSVMYVIFYFVWRKKSSPIPQIKKLTNLLLIVLLIVSVFIVLI 274 Query: 259 NKPIQNRYNEALNDL-NSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 + ++ N ++ SV+S R + L ++ + Sbjct: 275 YNTENPLTGQGKVNMTNRFSAMASVSSRDERFLSWFTSLELWEDHKIFGTGIGTYQLLSL 334 Query: 318 LLVAEHNRLRGALEFS---NVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 + E+ L + HN+ + G++G+ + L L Y + Sbjct: 335 TKMGEYLEKHPELYYGWNNFKRAHNDYFQVLGETGIVGLSLIILLLAFLVYYFFT 389 >UniRef50_D1CIX2 O-antigen polymerase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CIX2_THET1 Length = 494 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 93/287 (32%), Gaps = 28/287 (9%) Query: 95 DNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKES-VLYTLYSLSFLIAGYAMYI 153 S + Y Y T + + V T+ K ++ + S++ ++ YA I Sbjct: 136 SESDYVIKYARYQTTQLLAMVLIIAVVATVRDVKKLATALCLITVVVSIASILQHYAPSI 195 Query: 154 NSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKK------------NHPFLFLLN 201 D + +S+ + + + +A + L L Sbjct: 196 APYGLGDANTVRDWKGRSIGFSSSPVTLANQIAFVVMPLMGVFFSSAVGVGRRRILALFG 255 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 ++ L + TR+ VA + + + ++L A++A ++ Sbjct: 256 ILLLVGGLNFSYTRSAFFALAPATVALALCLKGRVRIALLAMVLL--AVVAFQLLRGTGL 313 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 I +RY + D S + A++++G I + P E E V Sbjct: 314 IGSRYYKTAED---------DRSAASHQALWDVGFAIAMDHPILGIGHEHFEEVSAQYVD 364 Query: 322 EHNRLRGAL----EFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 E N A HN+ + + G+ + + L L++ + Sbjct: 365 ELNTSADAAGGTSAVGKERPHNDFLSVWTSWGIFALLAYLALFWGMI 411 >UniRef50_D2UC28 Probable lipid a core-o-antigen ligase protein n=1 Tax=Xanthomonas albilineans RepID=D2UC28_XANAL Length = 452 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 71/180 (39%), Gaps = 11/180 (6%) Query: 198 FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 +LL + AV VL L +RA+ + + ++ V + + + + A++A ++ + Sbjct: 219 WLLAATAVGVVLVLAGSRASWITYALLLVLSGWGLLG---ARKLLVLGVAAALVAGVLGL 275 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 + + +R+ + + A+ +L R ++ + + P E Sbjct: 276 VSPQVHDRFERSARAFSG-QPADLNAALTGRAQIWAASWCMIRQHPLDGVGVRGFRE--- 331 Query: 318 LLVAEHNRLRGALEFSNV---HLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG 374 A + E+ + H H ++E S G++G+ L + + A++ ++ Sbjct: 332 AYAACNPTPTQPGEWGSEPAFHAHQIVLEVLSETGVIGLLLWLA-GAAQAWRAWRYASVA 390 >UniRef50_P73958 Slr1515 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73958_SYNY3 Length = 474 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 77/259 (29%), Gaps = 34/259 (13%) Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 AAY + G+ +++ + L L L TQ+R L + L Sbjct: 204 AAYLVPMTGLSLSALVVWRRWWPKLLGATMVIVNLLCLFFTQSRGGWLAVLALGATFLAL 263 Query: 232 YYNK--------SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVT 283 Y + + + IL +I +PI+ R + Sbjct: 264 CYFWWLPQLPKFWQRWSLPLAIAVAVILGGGALIAVEPIRLRAMSIFA-------GREDS 316 Query: 284 SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIE 343 S R+ ++E + P + A + F+ + ++ +E Sbjct: 317 SNNFRINVWEGVKAMIRARPIIGIGPGNEA------FNQIYPYYMRPRFTALSAYSIYLE 370 Query: 344 AGSLKGLMGIFSTLFLYFSLFYIAYKKRA-------------LGLLILTLGIVGIGLSDV 390 G++G L+L + +G L +G++ G+ D Sbjct: 371 ILVETGVVGFTCMLWLLAVTLGKGVELVKRCRQTLAPEGIWIMGALAAIIGLLVHGMVDT 430 Query: 391 IIWARSIPIIIISAIVLLL 409 + + + + + ++ Sbjct: 431 VWYRPPVSTLWWLLVAIVA 449 >UniRef50_C6I0F5 O-antigen polymerase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0F5_9BACT Length = 444 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 117/359 (32%), Gaps = 19/359 (5%) Query: 30 FFSMIIAFVDNTFSIKIYNITAIVCLLSLI--LRGRQENYNIKNLILPLSIFLIGLLDLI 87 + + + FS + I ++ L ++ LR R + LIL L +F+ L L+ Sbjct: 46 YVLFSVFVFNMPFSEALKEIFLVLSFLLIVIHLRDRAYEPAPRILILGLPVFIFALSSLL 105 Query: 88 WYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIA 147 + R + +F + ++ L + + Sbjct: 106 SALHSINTHQALRGFWGDLETLMSWVVFAGAFLLFPDRTRTLRISLVALAAGLAAGAAVG 165 Query: 148 GYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLY 207 Y M + ++ G ++ ST + + + FL + Sbjct: 166 LYKMVALGDPNMEMMNLGDKNSSAQFISTSFLLFLGAWTLPKLSGLTGRFFLPVLLLLSG 225 Query: 208 VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYN 267 L L +RA L+ P+ A L+ + + + L A+ A ++++ R+ Sbjct: 226 SLILCHSRAFLISLPVASAALLLLGRH-----WKILVGTLAAMAAGAALLYSLSPHLRW- 279 Query: 268 EALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLR 327 ++ S S +R + L IF P ++ +A +++ Sbjct: 280 ----EMASVIAPARDGSFTSRYETWAGALRIFHDHPLLGVGPDTF------QMANIHKIY 329 Query: 328 GALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIG 386 ++++ H HN GL+G+ S + F + + L + +G Sbjct: 330 HLPDYAS-HGHNIFFNLLGEYGLLGVLSFALILFLWSGRVLRDKDPSETGRLLKGLTVG 387 >UniRef50_A8ZZ87 O-antigen polymerase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZZ87_DESOH Length = 404 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 83/259 (32%), Gaps = 30/259 (11%) Query: 155 SIHENDRISFGVGTATGAAYSTML-----IGIVSGVAILYTKKNHPFLFLLNSCAVLYVL 209 I R++ V + M+ +G + ++ T L + L Sbjct: 151 LIFGGHRLTAAVHNPNLFGFLMMIGALSILGTIRPARLIKTGVVKFIFLCLLLGMFFFCL 210 Query: 210 ALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEA 269 + +RA L + + K+ + + I + ++++ N R +A Sbjct: 211 LYSGSRAAWLSLAFGIFLFFLLRF-KNWNRAMKIFAITIVLTLPVLLLANDLFIKRMGDA 269 Query: 270 LNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGA 329 + G R ++ ++ +P R + + L + Sbjct: 270 FINY------------GHRPGCWQGAVSFIADAPVFGHGI--RDDMIFLKLKRIAITSP- 314 Query: 330 LEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSD 389 HN +E L G +G L ++L+ A K ++ L + G+ +S Sbjct: 315 --------HNAYLEVMVLLGFVGFLIYGRLIWTLYCRALKL-SVIQPAYCLMLTGMMVSA 365 Query: 390 VIIWARSIPIIIISAIVLL 408 + I++SA LL Sbjct: 366 FFGHSFITDQILLSACCLL 384 >UniRef50_Q3SHP5 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHP5_THIDA Length = 415 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 93/261 (35%), Gaps = 9/261 (3%) Query: 111 KIFIFGSFIVFL---TLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVG 167 +I++ G +++++ L + K + L + + LI Y H G+ Sbjct: 93 RIWLAGLYLIWMLREPLARERLFKLSAWLLVFWVVDALIQAIVGYDLFGHAYPERLNGIY 152 Query: 168 TATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVA 227 T L + V +++ + L V+ L R + ++F + V Sbjct: 153 GPTNWKLGLTLAMLSPIVWEYFSRHGTRWQLALAWLGTAAVVLLASNRESWIVFAVATVM 212 Query: 228 ALIAYYNK---SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLN-SYTNANSVT 283 Y + P + +V+ + V N R +++L+ + +Y + N+ + Sbjct: 213 WTWVYARRLAFHPVRLLGPLVVAAVVAGVGVYQVNPKFAQRVDQSLSAFDFTYESLNNAS 272 Query: 284 SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIE 343 S R+ ++ L + P + S + ++ ++ H ++E Sbjct: 273 S--YRVHLWNNALTVLKNHPVNGAGVRSYRYAYAKYAKPNDPYLSPDGTGMIYAHQLVLE 330 Query: 344 AGSLKGLMGIFSTLFLYFSLF 364 GS G +G+ L + L Sbjct: 331 VGSETGGIGLVGLLMFFAVLI 351 >UniRef50_C6DZV8 O-antigen polymerase n=1 Tax=Geobacter sp. M21 RepID=C6DZV8_GEOSM Length = 437 Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 63/385 (16%), Positives = 131/385 (34%), Gaps = 39/385 (10%) Query: 42 FSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRA 101 K++ A++ L + ++ L + I+ + LL IW+S + + Sbjct: 49 IVFKVFIGAAMISFLRNPGGRLTSAFACRDFWLIIWIW-VALLVSIWFSPYPTNPL---- 103 Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR 161 +Y + + + + + T+ +A + + + N+R Sbjct: 104 ---AYEFANEFLKLAVLLWLVLGLLHSEERIVHYERTMLGAFSFLALWGVEQHF-RGNER 159 Query: 162 ISFGVGTATGAAYSTMLIGIVS-----GVAILYTKKNHPFLFLLNSCAVLYVLALTQTRA 216 + G A G + I +++ +A+ ++K +L S A+L + TQ+R Sbjct: 160 LEGLGGAAFGDSNGVAAILVLAFPLALNLALHSSEKRERWLGWGASAAILLAVIATQSRG 219 Query: 217 TLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY 276 L + + +K I++ +L + NR + + Sbjct: 220 GFLGLSVAAAVFFL-----HSRKKKQLILITSVLLGVAALFVTDGYLNRMSTITAE---- 270 Query: 277 TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGAL-EFSNV 335 S G+RL +++ G+ +F +P S + + L E+S Sbjct: 271 -EEERDLSSGSRLVLWKAGMMVFRDNPIIGTGFLSFPIAKQEYKDAVPNVDEKLREYSFR 329 Query: 336 HL---HNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA-----------LGLLILTLG 381 HN ++A S GL L + R L L + G Sbjct: 330 GYKVSHNSYVQALSEGGLFLFVPYALLILGCLWGNRALRRAKRDQAEHRLMLLLNGIEAG 389 Query: 382 IVGIGLSDVIIWARSIPIIIISAIV 406 IVG + V I A ++ ++ + +V Sbjct: 390 IVGYCVCIVFINALTVVLLPVQIVV 414 >UniRef50_A4WY14 Polysaccharide deacetylase n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4WY14_RHOS5 Length = 464 Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 91/277 (32%), Gaps = 16/277 (5%) Query: 111 KIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTAT 170 K + ++ +L S L ++VL T + A A +S T Sbjct: 162 KAGVIAWILIVSSLVSALILMADTVLGTHLVAASEAATTA--QSSEGFVRSSGASDQNPT 219 Query: 171 GAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALI 230 AA S +L+G++ + L L + L + R+ + + I+ + Sbjct: 220 TAA-SLLLVGVIMALVHAIETPRFRLLMLGVAGLGTIALIFSFARSAAIAYAIVGICLAW 278 Query: 231 AYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLA 290 Y VL+ A+ A I E + + +LG RL+ Sbjct: 279 RYRRSRYTPLAMFGVLVAAVGALPFIPA---------EYWERMATIFGGGGDWTLGRRLS 329 Query: 291 MYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGL 350 IG+ +F + P + AE N R LHN + + G+ Sbjct: 330 YNLIGIQLFAERPVFGIGPGNFAERFN---DPEFRFYPGRTLLGRELHNMYLSVLTQYGV 386 Query: 351 MGIFSTLFLY-FSLFYIAYKKRALGLLILTLGIVGIG 386 +G + + +L + RA L + + +G Sbjct: 387 VGAAAFYGMLGGALVALRRVLRAPASETLRIWALALG 423 >UniRef50_UPI000174580F hypothetical protein VspiD_02685 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174580F Length = 631 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 90/265 (33%), Gaps = 33/265 (12%) Query: 107 LNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGV 166 A++++ G + + S ++ + + Y+ + E RI Sbjct: 110 HPGARLWVLGVLLFTTLGNLVVGFIHFSGRWSFHVVPS-------YMRAFGEEQRIGGFY 162 Query: 167 GTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVL--ALTQTRATLL----- 219 A ++ +V L+ + LL A+ + ALT +R L+ Sbjct: 163 NNPNHLAAFLTMMSLVLAGMALFGRGGAARKLLLGFVALSAAIGVALTVSRGALVGLAAG 222 Query: 220 --LFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI-IFNKPIQNRYNEALNDLNSY 276 + + + L Y K + +++A+ ++ +F++ +Q R+ ++++ Sbjct: 223 GVVLAALSLFILWKTYPHLVGKLLVATAVVLAMGGMVLFGVFSEQLQRRFG-----MSAF 277 Query: 277 TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL-RGALEFSNV 335 + R+ +++ L P A E L EF Sbjct: 278 SEGEP------RMQIWKAALEQHQTHPLIGAGARMFYEGCVTYRQAIAPLWLQEAEFV-- 329 Query: 336 HLHNEIIEAGSLKGLMGIFSTLFLY 360 HNE ++ + G +G+ + + Sbjct: 330 --HNEWLQTLADYGWVGLGLVIAVL 352 >UniRef50_C1XMI1 Lipid A core-O-antigen ligase-like enyme n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMI1_MEIRU Length = 545 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 71/197 (36%), Gaps = 15/197 (7%) Query: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 ++ + + P L + LY+ ++ RA L P++ + L+ + Sbjct: 142 LIPLAMMWLFRSRWPILSGILLTGALYLALMSGARAVYL--PLVFIVLLMVWRLWREGIP 199 Query: 241 TSSIVLLIAILASIVI-----IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIG 295 I+L+ A++A+ ++ + PIQN + + S+G+RL M++ Sbjct: 200 LRQIMLVCALVAAAIVSLDTALPFSPIQNALGLKATLSRQAQDLGAEGSIGSRLQMWDQT 259 Query: 296 LNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFS 355 L I ++ P + R L A HN +E + G + + Sbjct: 260 LKIALQHPMGTGNGSFRDTLAAYLQYPGILFSNA--------HNYYLETAATGGWLRLLL 311 Query: 356 TLFLYFSLFYIAYKKRA 372 L + + + A Sbjct: 312 LLVILVWALWHGWNSPA 328 >UniRef50_C8P120 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P120_ERYRH Length = 402 Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 87/255 (34%), Gaps = 40/255 (15%) Query: 161 RISFGVGTATGAAYSTMLIGIVS----GVAILYTKKNHPFLFLLNSCAVLYVLALTQTRA 216 R A+ +++ +V I + + LY + LT TR+ Sbjct: 158 RAYSTFDNPNLYAFVLLIVLLVCFNQLQFQITFKNYRLGAFYAGAFIINLYAMFLTGTRS 217 Query: 217 TLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY 276 ++ + ++ + K +++L+ L ++ I+ + R+ + Sbjct: 218 IIVALMFGLLTVILVQRKWTQFK----VMILLGALLTLFILSRPDLFPRFMQIAEH---- 269 Query: 277 TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVH 336 G RL +++ ++ +K P+ + AL F N+ Sbjct: 270 --------SGIRLEIWDKAIHQILKEPWFGKG----------------MFTYALLFDNID 305 Query: 337 LHNEIIEAGSLKGLMGIFSTLFLYFS----LFYIAYKKRALGLLILTLGIVGIGLSDVII 392 HN IE+ G+ G + ++ AY L + + + G+ D+ + Sbjct: 306 AHNIFIESFLSFGICGTIILVSFLIGKLRDVYLNAYYLDYPLALGVLVATIMYGIFDIPL 365 Query: 393 WARSIPIIIISAIVL 407 +A ++ ++ L Sbjct: 366 FAVQTSLLFVAVFCL 380 >UniRef50_B9XBX6 O-antigen polymerase n=1 Tax=bacterium Ellin514 RepID=B9XBX6_9BACT Length = 452 Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 77/253 (30%), Gaps = 33/253 (13%) Query: 161 RISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP-----FLFLLNSCAVLYVLALTQTR 215 RI + A +L+ + I ++ FL L A L L + ++ Sbjct: 201 RIFATLFYPNALAGVILLVLPPTLAFIWSLRERLTSGARVFLMALYGVAALGCLYWSGSK 260 Query: 216 ATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNS 275 LL + + K + ++ +A + + + Sbjct: 261 GGWLLMLVTLLVGSFFMPMKQRVRLAIVGTFMVLGVAGFALKYQGFFKK----------- 309 Query: 276 YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV 335 TS+ AR + + P + A++ + + + Sbjct: 310 -----GATSVVARGDYWRAAVETTKVHPVFGTGPGTFAKAYEKIKKPESEMSRLT----- 359 Query: 336 HLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL----GLLILTLGIVGIGLSDVI 391 HN+ ++ S G++G Y Y + + L + LG++G L + Sbjct: 360 --HNDYLQQASDSGVLGFLLYAAFLSYSIYFIYSRTDIRGHWLKLGVWLGLLGWALQSTV 417 Query: 392 IWARSIP-IIIIS 403 + IP + I+ Sbjct: 418 EFGLYIPALSWIA 430 >UniRef50_UPI0001C33463 probable bicarbonate transporter, IctB family n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C33463 Length = 459 Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 87/264 (32%), Gaps = 24/264 (9%) Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLF---PIICVAA 228 +AY I + ++ K L L + L T +R+ + +I Sbjct: 201 SAYILPSIALSMAAFFVWQKTLPKLLALTILLINTFCLYFTGSRSGWIALIICLVIFSLL 260 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGAR 288 L ++ F +L I I IF + + + + S + +S R Sbjct: 261 LFTWFKDELPLFWRQWLLPITFGTLISFIF--VLIASNDILQSRIMSIFIGRADSSNNFR 318 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLK 348 + ++ +N+ PF + A S + + +S +E Sbjct: 319 INVWTSVVNMIKDYPFLGIGPGNDAFSKIYPLYMSPKYSALSAYSV------FLETAVEM 372 Query: 349 GLMGIFSTLFLYFSLFYIAYKKRA-------------LGLLILTLGIVGIGLSDVIIWAR 395 GL+G+ ++L F++ +K + + +G++ GL D + + Sbjct: 373 GLVGLSIFIWLIFTIINQGIQKINKLKNDKNSHGIWIIAAVAAIVGLLMQGLFDTVWYRP 432 Query: 396 SIPIIIISAIVLLLVINNRNNTIN 419 + + + L+ + IN Sbjct: 433 QVNTLWWFLVALIASQHKSKEKIN 456 >UniRef50_A1HP47 O-antigen polymerase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP47_9FIRM Length = 412 Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 43/338 (12%), Positives = 109/338 (32%), Gaps = 52/338 (15%) Query: 103 YHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSI------ 156 Y+ Y + I + + + +++ + + ++ Y Y Sbjct: 90 YNYYHLMGRYII---IYYLVVNNVHSLEQLKRIVWAVLVSAAVVTAYGFYQYIYGIDISA 146 Query: 157 -----------HENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAV 205 + S A + M++ + +G+A+ L + Sbjct: 147 FEWVDGEQFPDLKVRVFSTLQNPNLLAGFLVMIMALAAGLALRGAHSVPRRLAFAIFIGL 206 Query: 206 LY-VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQN 264 L L LT +R L ++ V + + + ++ + + + Sbjct: 207 LGVCLVLTYSRGAWLS--VLAVIGVYGMLHNRRIFWLLLLIPAAVL------PAHDAVLE 258 Query: 265 RYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHN 324 R +N + TS R+A++E + + + P + L+ E++ Sbjct: 259 RLLSIIN--------PTDTSSTLRIALWESTVAMIMDRPLLGIGWGAY----WLVYPEYD 306 Query: 325 RLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK-----------KRAL 373 H HN ++ + G+ G + L + +A + L Sbjct: 307 FFVQDAGTKIFHAHNLYLQIAAEIGIPGFVAFLTVMAGHARLAVRLIGNAGDQWASALML 366 Query: 374 GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 G++ +G+ GL+D I++ + ++ +++V+ Sbjct: 367 GVVAALVGLAVNGLTDHILFNIQLSMLFWLLNAMVVVV 404 >UniRef50_A7A9I9 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7A9I9_9PORP Length = 608 Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 76/232 (32%), Gaps = 18/232 (7%) Query: 185 VAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSI 244 +A+ ++ + +L S ++ L + L ++ + K+ +I Sbjct: 190 IALWKSRTFLFYFSILGSTLIITTLIFKTDQPVWLA-ALLSGIWVCWMRLIGWKQTKKAI 248 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF 304 I + A II I + ++ + RL ++ I ++ P Sbjct: 249 QKHIQLFAISSIILFVAITAVI--LVGNIQKAQAGDR------RLLIWNITTQAIMEHPV 300 Query: 305 SFRSAESRAESMNLLVAEHNRLRGA------LEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 + + + + A + +NE ++ G G+ G+ +F Sbjct: 301 TGIGIGGFPATYAKEQSAYFETDTASSKEKQTATCPQYAYNEYLQIGLELGITGLLFFIF 360 Query: 359 LYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 Y + R +G GI+ +G+ + + +P + + L + Sbjct: 361 WLAFSLYYGIRHRQIGASG---GILALGIFALYSYPLQLPTYWVLLLFLTTI 409 >UniRef50_B5UQ63 O-antigen polymerase, putative n=1 Tax=Bacillus cereus AH1134 RepID=B5UQ63_BACCE Length = 418 Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 103/314 (32%), Gaps = 37/314 (11%) Query: 119 IVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR-----ISFGVGTATGAA 173 ++ L L K + + +++ Y + + + + Sbjct: 103 VIVLPLILSTKERLYIFMSWFIIFGLILSVYVISLTDYNRLLEGRYYASEVLEESIGNRN 162 Query: 174 YSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLL--FPIICVAALIA 231 +LIG+ + + L+ + +L + LT +R LL+ P+ L+ Sbjct: 163 AVALLIGLAFNFGVYKVFYQRNYKHLIFALVMLTAVLLTGSRKGLLICFIPMFINIFLMG 222 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFN---------KPIQNRYNEALNDLNSYTNANSV 282 + K V LI V+ +N + I R+ ++ + ++N Sbjct: 223 MKSNLKKNIQYFFVSLILATLLSVLFYNILFKIDILYENIGWRFESMYQEIFLHESSN-E 281 Query: 283 TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEII 342 S R M + G++ F + P E+ V + + HN I Sbjct: 282 GSYHTRKNMIQYGMDYFKERPLLGHGIENFRYLYAQEVGK-----------ETYSHNNYI 330 Query: 343 EAGSLKGLMGIFSTLFLYFSLFYIAYKKR---------ALGLLILTLGIVGIGLSDVIIW 393 E G++G+ Y S+ A +R L ++L I + ++ Sbjct: 331 ELLVNNGIVGLLLYYSFYISVILKANDRRRKSKSLEEKRYYLFCISLLICMFIIDWGLVS 390 Query: 394 ARSIPIIIISAIVL 407 + P I+ A+ L Sbjct: 391 YKWYPNYILLALAL 404 >UniRef50_C6BCQ9 O-antigen polymerase n=1 Tax=Ralstonia pickettii 12D RepID=C6BCQ9_RALP1 Length = 590 Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 82/217 (37%), Gaps = 10/217 (4%) Query: 182 VSGVAILYTKKNHPFLFL-LNSCAVLYVLALTQTRATLLLFPII--CVAALIAYYNKSPK 238 ++ L + H + L L + L ++L +R L ++ A+ + + Sbjct: 181 IAASGFLAHRCRHARIPLALIAVIFLLGMSLAFSRTAWLHIVVLGTLAGAIWTLEQRGWR 240 Query: 239 KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNI 298 ++ + V + +L + + L DL + +G R +++ ++ Sbjct: 241 RWVKACVPALVLLVTYQLCNWLVAYANIRWHL-DLPTSMGERINEGVGPRAVLWQHAWHM 299 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 F+ P+ A + L + R A + HN +++ + G++G+ + Sbjct: 300 FVVHPWLGGGWGDYAWNQYLQTDQLGRAVMAT-----NAHNIVLDQLAKLGVLGLLAVAL 354 Query: 359 LYFSLFYIAYKKRA-LGLLILTLGIVGIGLSDVIIWA 394 + + K+RA G+ L I+ +G ++ + Sbjct: 355 PFLGFVWNLRKRRATPGMAFLLGTILVMGAHSMLEFP 391 >UniRef50_A9B578 O-antigen polymerase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B578_HERA2 Length = 501 Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 94/290 (32%), Gaps = 22/290 (7%) Query: 142 LSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLN 201 L F AG ++ + ++ RI+ +G + + + + + K F + Sbjct: 206 LGFAKAGKMQIVSGVEDDYRIAGPIGDPNFYSQVLLTLIPLGMDRMWNEKNKKLRWFAIW 265 Query: 202 SCAV-LYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 +V + + + +R L + +A+LI + + PK + I++ + + + + Sbjct: 266 QLSVCMASIFFSFSRGAFLS---LSIASLIMFVRRPPKPLSVIIIIALGFVIIPTLPAS- 321 Query: 261 PIQNRYNEALNDLNSYTNAN--SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNL 318 R + + + S R + + GL +F +P + Sbjct: 322 -YIARLETIPEAIPGLAQEDVRNEASFRGRSSAQQAGLRMFWANPVFGLGVGNFGNHYQE 380 Query: 319 LVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG---- 374 + + HN +E + KGL G+ + + LF + R Sbjct: 381 YARD--LGLDNSRWDQA-PHNMYLEILTEKGLFGLSVFSAMMWVLFRDMNRARKKFREIN 437 Query: 375 -------LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + G+VG + + + I + + N N Sbjct: 438 MGDFDGLIFGFQAGLVGYMFAGIFLQLSYPRFFWILIAIAYAIPNVANKA 487 >UniRef50_C1D4Z1 O-antigen polymerase n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4Z1_LARHH Length = 399 Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 109/304 (35%), Gaps = 19/304 (6%) Query: 119 IVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTML 178 LTL + K+ ++ + ++ ++ + Y N I D T T + Sbjct: 100 PFLLTLIYESKAGDIKIIKWSWLVAVILMATSGYFNYITTQDIRPHSAFTNTIPYSAFCA 159 Query: 179 IGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPK 238 + + V I + K L+ + AV++ +Q+R + + +I YN S K Sbjct: 160 VFAILFVTINQSGKLISAACLIPASAVIF---YSQSRGVWIGVILATAFLIINAYNISGK 216 Query: 239 KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNI 298 K I IA++A + + +R + + + N N S+G R+ + I Sbjct: 217 K----IFPTIALIAILAYATSDLFSSRADITIQQTMDFFNGNREGSVGMRMQLALASYYI 272 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 FI++P L V N H E+ + G++G+ L Sbjct: 273 FIENPLFGAGRNLLPALHELYV---NGYITQSVSDAADTHGELFYNAASLGIVGVIYYLI 329 Query: 359 LYF--------SLFYIAYKKRALGLLILTLGIVGIGLSDVII-WARSIPIIIISAIVLLL 409 Y ++ A ++ + + +++ G + + + I +VLL Sbjct: 330 FYIFTTVPFIQAMKQEATRQVGMAGVAISIVFFFTGFTHITFGLSMYASIYASIQVVLLT 389 Query: 410 VINN 413 I N Sbjct: 390 AILN 393 >UniRef50_C4V4R3 O-antigen polymerase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4R3_9FIRM Length = 454 Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 20/165 (12%) Query: 208 VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYN 267 L +T R L+ L+A Y ++L I ++ + V+ F+ + +R Sbjct: 222 CLGMTYARGACLVI-----GILLAGYGVLRDWR---VLLGIVVVGAGVLFFDPVLSDRLL 273 Query: 268 EALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLR 327 + TS RLA +E + + + PF + L+ Sbjct: 274 SVFTRV--------DTSSEMRLAFWESTVAMILDHPFLGIGWGMY---FMVYPEYDFYLQ 322 Query: 328 GALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA 372 GA VH HN + + G+ G + L+ +F A++ Sbjct: 323 GAP-VQIVHAHNMYLNYAAEIGVPGALAFLWFFFGSMIHAFRLPR 366 >UniRef50_Q8A281 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A281_BACTN Length = 536 Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 92/284 (32%), Gaps = 31/284 (10%) Query: 131 KKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYT 190 ++ L + + G Y + I + + A Y+ L V +Y Sbjct: 75 PSFYIIVLLSDVVLAMHGILQYTHIIPFHSYLGLSGSFDNPAGYAASLCAGFPAVFYIYM 134 Query: 191 ---KKNHPFLFLLNSCAVLYVLALTQTRATLLLFPII-CVAALIAYYNKSPKKFTSSIVL 246 K +L V+ V+ L+ +R +L ++ V L S KK+ ++L Sbjct: 135 HYCSKLIRGSVILAGLCVIIVVVLSGSRTGILSIAVMCIVCFLQKTEIGSRKKYLLLLLL 194 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 L + +++ F K S RL +++ + +P + Sbjct: 195 LFPVFVTLLYFFKKD----------------------SADGRLLIWKCSALMIKDNPVTG 232 Query: 307 RSAESR-AESMNLLVAEHNRLRGALEFSNV----HLHNEIIEAGSLKGLMGIFSTLFLYF 361 + A MN R H NE I GL+G L + Sbjct: 233 YGSGGFLANYMNYQAEYFARDTDNKYAMLAGDVKHPFNEYILLVVNYGLIGFLLFLTFVY 292 Query: 362 SLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAI 405 L+ + L I T+ ++GI + + S P + + I Sbjct: 293 FLWKCYRRNSCLETNIATVCLIGIAVFACFSYPLSYPFVWVMMI 336 >UniRef50_Q1ZHF3 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZHF3_9GAMM Length = 555 Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 138/368 (37%), Gaps = 42/368 (11%) Query: 71 NLILPLSIFLIGLLDLIWYSAFKVD----------NSPFRATYHSYLNTAKIFIFGSFIV 120 +L++ L ++ + + ++YS F + + + + +++ G+ + Sbjct: 48 SLLISLGLYQVSRIKTLYYSHFSIAFLIAIVFFCVPLIYANNTLAIQSASRLLGLGAGFL 107 Query: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMY-------------INSIHENDRISFGVG 167 Q++ KK +L+ L + A AMY I R Sbjct: 108 VFLSFQQMRFKKSDILHLLIFIVLAGALQAMYSLIQSYLLSEHNFIGYDIHYGRPYGVFQ 167 Query: 168 TATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL-NSCAVLYVLALTQTRATLLLFPIICV 226 A I+S + +FLL ++ ++VL LTQ+R+ L +I + Sbjct: 168 QPNVLASFMATTLILSAYLLSKVHCQKQHVFLLISAFLCMWVLVLTQSRSGYLG-LLIAL 226 Query: 227 AALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLG 286 A + + KK ++L +++ S ++ + +Q+R E + S G Sbjct: 227 AFVAPLLYSAHKKRFFFLLLALSLGLSCALLKDDALQSRSLETMQ------------SGG 274 Query: 287 ARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEH--NRLRGALEFSNVHLHNEIIEA 344 R+ +Y + + ++ P S +S A+ A + H HNE + Sbjct: 275 PRITLYTQSMQMILEKPLLGYGYGSFPKSYLFAFAKSVSQDEFSAQQGYLTHPHNEFLFW 334 Query: 345 GSLKGLMGIFSTLFL---YFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIII 401 G+ +F+ L L + L +K+AL L + I+ +++ ++ +I Sbjct: 335 AVEGGIAPLFAILILCVAFLRLLRTQKRKQALAFCALVIPIIVHTQTELPLYQSAIHWFT 394 Query: 402 ISAIVLLL 409 + +V + Sbjct: 395 LLFLVFYI 402 >UniRef50_B8F9U4 O-antigen polymerase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9U4_DESAA Length = 459 Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 90/277 (32%), Gaps = 23/277 (8%) Query: 153 INSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLY-VLAL 211 + R+ + A + + ++ + + C + L + Sbjct: 187 YHDQLPGRRLGSTYYNSDHLAGLMEMTLCLGVGLLMAGLSRSKRIAIGLGCLFMATALVI 246 Query: 212 TQTRATLL--LFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEA 269 + +R L + + + A + +++ ++ +VI+ + P R A Sbjct: 247 SLSRGGWAGALVGLGLIGVIFAERRYFRRGIIVALIGATFVVMLLVILMSSPTVERILTA 306 Query: 270 LNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGA 329 S +R+ +++ ++ P + + E +R Sbjct: 307 -------EQGIDNASWSSRVTVWKATRDMIADHPVFGVGPGNFSLGFTQYQPEGLSVR-- 357 Query: 330 LEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLIL--TLGIVGIGL 387 H HN+ + S GL+ I L++ L A K ++ T G+ Sbjct: 358 ----FFHAHNDYLHIISEIGLLLIPVVLWMTIVLIRQARIKINPPSRLIRGTTIGALAGI 413 Query: 388 SDVIIWARS-----IPIIIISAIVLLLVINNRNNTIN 419 + +II + +P +S I+L + + ++ + Sbjct: 414 TAIIIHSIGDFNLHLPANALSFIILAAIFFSSHHDMR 450 >UniRef50_C0QH03 O-antigen polymerase involved in exopolysaccharide biosynthesis n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QH03_DESAH Length = 776 Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 93/292 (31%), Gaps = 23/292 (7%) Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATG 171 I IFG + F ++ +K ++ + ++ +I G + N + F V A Sbjct: 147 ITIFGGLLSFSSILQFYLTKDMALWFWHVPVNSMIVGPYICHNHYAGLMEMIFPVVLALF 206 Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLL----NSCAVLYVLALTQTRATL--LLFPIIC 225 Y + ++ L + ++ + ++ +R + L ++ Sbjct: 207 FFYRPRMANTTLLQGVIQILSQEKANIHLIIGGAALLIVTSVFVSLSRGGMISLCLSLVF 266 Query: 226 VAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSL 285 L+ S I +++ SI I +R+++ N S Sbjct: 267 FTFLLFRRKISRGNTLLIIAVIVVAALSIAWFGWDQIFDRFSKLKN-----AQGVIHES- 320 Query: 286 GARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAG 345 R ++ L I + + + + + GAL + H HN+ IE Sbjct: 321 --RFDFWQDSLGIIRDFFWVGSGFGTYIDIFPA----YQTVYGAL--TINHAHNDYIEMV 372 Query: 346 SLKGLMGIFSTLFLYFSLF---YIAYKKRALGLLILTLGIVGIGLSDVIIWA 394 GL+G +LF Y + +R + GL + Sbjct: 373 VEGGLVGFLLAAAFIVTLFSKTYSRFMQRKDAYCVYIYMGSITGLVAFLFHG 424 >UniRef50_C9Y124 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y124_CROTZ Length = 467 Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 78/216 (36%), Gaps = 5/216 (2%) Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 A++ IG + + + + L + + +VL L Q+RA + +I + Sbjct: 86 ASFLASGIGCGFLLLLQQRLRRNALLCIAGLGLLTFVLVLNQSRAGEIGAILIVLCLAAL 145 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 + + P + ++++L+ A+ I +N + + +S AR + Sbjct: 146 LWRQHPARIAAALILMTMSAATAWYITQHT-----TVLVNGVPYSMARDYASSTHARWKI 200 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 I + ++ P+ + + + V H H HNE++ A G++ Sbjct: 201 LAITWQMIMEKPWLGWGYGTFEYAFSRFVLAHPEYGYTYSSIVTHPHNELLYAWFQGGVV 260 Query: 352 GIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGL 387 + L L+ I G + ++ I L Sbjct: 261 ALAGMLLLFAGWVKIVITAWRQGRMQTGYALLIIPL 296 >UniRef50_B8GCP3 O-antigen polymerase n=3 Tax=Chloroflexus RepID=B8GCP3_CHLAD Length = 496 Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 77/212 (36%), Gaps = 13/212 (6%) Query: 189 YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPI---ICVAALIAYYNKSPKKFTSSIV 245 + + + + + +++ L + +R + + + L A+Y + + + ++ Sbjct: 237 WRDRLRLGIVFITAGSLIGGLLASFSRGGWVGAALGATVMTVVLGAWYGRRMLRQSIPVI 296 Query: 246 LLIAILASIVI---IFNKPIQNRYNEALNDLNSYTNANSVTS-----LGARLAMYEIGLN 297 L+ I++ + + +R + +L + N + + R+A + N Sbjct: 297 LVAVFGGMILVNSGLLPTALSSRLTSIIANLQPFDVRNVNITPDNFAVVERMAHLQAAWN 356 Query: 298 IFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEF--SNVHLHNEIIEAGSLKGLMGIFS 355 + + P + + LV + S H HN + + GL+G+ + Sbjct: 357 MVQERPLLGVGPGNFTIAYERLVYSGQTPTWIKPWYDSRGHAHNYYLHIAAESGLIGLSA 416 Query: 356 TLFLYFSLFYIAYKKRALGLLILTLGIVGIGL 387 L L S++ A + T GI G+ Sbjct: 417 YLLLLGSVWRTAVRAVQQANDWFTRGIALGGI 448 >UniRef50_UPI000197B9DC hypothetical protein BACCOPRO_00097 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B9DC Length = 588 Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 44/314 (14%), Positives = 101/314 (32%), Gaps = 37/314 (11%) Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATG 171 + + + L L + + L+ +L I+G A + + + GT Sbjct: 101 LLVLWFILRLLFLFRPETRELFTRLWLTVALGEAISGMAQLYGFTYSHHALFNLTGTFFN 160 Query: 172 AAYSTMLIGIVSGVAI---LYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA 228 + + I+ A+ L+ +K L + VL ++R+ + + Sbjct: 161 PGPYSGFLAILLPWALHVALHNRKLTGHYAWLCVLVICVVLPAGRSRSAWIAALLGSAWV 220 Query: 229 LIAYY--------NKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN 280 LI+YY + PK+ + ++ + +LA ++ Sbjct: 221 LISYYKAAIISYTRQYPKRIAAMLLASVLLLAGGAYGMYHLKKD---------------- 264 Query: 281 SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEF----SNVH 336 S RL M+++ I + E+ A + + + E + Sbjct: 265 ---SADGRLLMWKVSTQIIREQRGLGVGVGHFPEAFAEAQASYLKHASSQEKWVAGCPEY 321 Query: 337 LHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARS 396 NE ++ G+ + L + F++A + + G+ + S + Sbjct: 322 AFNEYLQIAVELGIFPLMLFLGVGGGAFFLAVRTKQSGISGALIAFAIFAFSS---YPLQ 378 Query: 397 IPIIIISAIVLLLV 410 +P I + L + Sbjct: 379 LPDFWILWVCLCAL 392 >UniRef50_B3C9M5 Putative uncharacterized protein n=8 Tax=Bacteroides RepID=B3C9M5_9BACE Length = 571 Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 109/332 (32%), Gaps = 60/332 (18%) Query: 113 FIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAG--------YAMYINSIHENDRISF 164 + SF+ + + + Y + S ++ G +Y S+ + R + Sbjct: 59 ILIASFLQLFGKAYREDALEFRHFYAYVAWSLVLLGGVEAVWGLCQLYGFSVSGHSRYAL 118 Query: 165 G---VGTATGAAYSTMLIGI---VSGVAILYTKKNHPFLFLLNSCAVLYVLAL-----TQ 213 A Y M++ + + + + + AV +L L T Sbjct: 119 TGSFFNPGPYAGYLAMVLPVCLHLYLRICGWKGMPARYKIEKGAAAVSGMLILCVLPSTM 178 Query: 214 TRATLLLFPIICV------------AALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 +R+ + I C + L Y K + + I L++++ A+ + Sbjct: 179 SRSAWVAAAISCAWVAYMHRDKRKWSILWRRYKKRYVLWGAGIFLILSLAAAGMFFLKP- 237 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFS----FRSAESRAESMN 317 ++LG R M+++ P+ F A A+S+ Sbjct: 238 --------------------DSALGRRF-MWKMTCRAIAAHPWGCPTGFACAYGEAQSLY 276 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLI 377 + + S + NE +E G+ LF+ F +I K R G+ Sbjct: 277 FASGNYASWEERVAGSPEYAFNEYLEVALTYGVAMCILVLFVIFGCLWIGVKLRRYGICG 336 Query: 378 LTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 + ++ S + +P I++AI LLL Sbjct: 337 ALISLLVFSFSS---YPLHLPAFIVTAICLLL 365 >UniRef50_Q12AK2 O-antigen polymerase n=1 Tax=Polaromonas sp. JS666 RepID=Q12AK2_POLSJ Length = 738 Score = 57.4 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 109/324 (33%), Gaps = 48/324 (14%) Query: 75 PLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKES 134 PL++ L ++W + R + S +++L L + + K S Sbjct: 98 PLALMAYALGSMVWSHTYLAGVEAIR------------WFIFSLLLWLGLNTFTREKSPS 145 Query: 135 VLYTLYSLSFLIAGYAMYI-----NSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILY 189 + + +++ + + + + + + A + S + I Sbjct: 146 LFWGIHAGAVVASLWTALQFWIDFRFFSQGPNPASTFVNRNFFAEYVVCTLPFSALLIAR 205 Query: 190 TKKNHPFLFLLNSCAV-LYVLALTQTRATLLLFPIICVAAL----------IAYYNKSPK 238 K +L + A + L +T TR+ L ++ L +A + + Sbjct: 206 AGKPQEIAWLTFTTAFNIVALLMTGTRSALATLWVLLFLVLPLAGFFYRRQLACFAWNLT 265 Query: 239 KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVT-------------SL 285 + + I LL+ + + +I + LN N+ T SL Sbjct: 266 QRLAVIALLLVTIVGLGLI--HTGNPKIAGELNGRNALERGIFRTVSVVTDSDEFRTGSL 323 Query: 286 GARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAG 345 RL M++ + P S A + + L ++L ++ + HNE ++ Sbjct: 324 SVRLTMWKATGRMIQDRPLSGVGAGAWEVNGPLYQTAGSQLE-----TDYYAHNEPLQLL 378 Query: 346 SLKGLMGIFSTLFLYFSLFYIAYK 369 + GL+G + L L A++ Sbjct: 379 AEYGLVGWLALAGLLGYLGLAAWR 402 >UniRef50_A6T1Z8 Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1Z8_JANMA Length = 571 Score = 57.4 bits (137), Expect = 9e-07, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 74/232 (31%), Gaps = 14/232 (6%) Query: 168 TATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLA----LTQTRATLLLFPI 223 A A + + + G+A ++ + + L + +L L LTQ+R ++ P+ Sbjct: 169 HANIAQTNQLALLFCMGIASVWWLFQNDRVRPLFAIFLLASLIWGLSLTQSRIAWMILPV 228 Query: 224 ICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVT 283 + I Y K SI+ L + I + ++ + + Sbjct: 229 FSMLVFIWRYKPGFKPIPLSIIFGFLSLYFLFAFALPEISILFGSQVDSPAARASGGYS- 287 Query: 284 SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIE 343 ARL + + + P+ + ++ A H HN ++ Sbjct: 288 ---ARLVLLQQAWEMSRTHPWFGVGWYEFGPQQIAMASQFEPGTYAR-----HSHNIVLN 339 Query: 344 AGSLKGLMGIFSTLFLYFSLFYIAYKKR-ALGLLILTLGIVGIGLSDVIIWA 394 + G + F + K+ + L + IGL V+ + Sbjct: 340 FAAEFGWLFTFILMVWVIWWLKALINKKINSQTCLFFLFAMAIGLHSVVEFP 391 >UniRef50_C0N914 O-Antigen Polymerase family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N914_9GAMM Length = 571 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 71/201 (35%), Gaps = 10/201 (4%) Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 A + + S + + N L L+ V+ L+ +R L I L+A Sbjct: 181 ATCIILSFYLASRPLVFKRRFNVQALLLVTVLVSSIVVGLSGSRTGWLALAIALPVILLA 240 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 + + S+VLL A+++ V ++ + + + S + ARL + Sbjct: 241 RREQLWSNKSLSVVLLAALVSGFVFGTMNNGGKTIDKTV----AIQSGYSGS---ARLGI 293 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGA---LEFSNVHLHNEIIEAGSLK 348 Y I L++ + P+ S + + H HNE+++ Sbjct: 294 YTISLDLLAQKPWFGHGVGSFPRQFQYARPDFYIEYPEGKLPKQMINHPHNELLQWMVEG 353 Query: 349 GLMGIFSTLFLYFSLFYIAYK 369 G+ + + +L + YK Sbjct: 354 GVSALLGIVISVTALAFALYK 374 >UniRef50_A1VNY4 O-antigen polymerase n=2 Tax=Polaromonas RepID=A1VNY4_POLNA Length = 405 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 6/145 (4%) Query: 210 ALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEA 269 L+ ++ ++ +A + + PKK+ + +VLL +LA + + +++R + Sbjct: 186 ILSGRTGHVVAIALVSLAIMW----ELPKKYRAMVVLLPFLLALGLFFSSSKVRDRLTKV 241 Query: 270 LNDLNSYT-NANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG 328 ++ SY+ A VTS G RL ++ + + P + S + N L N Sbjct: 242 ETEVQSYSTQAEPVTSSGIRLNLWRRAIQSIGQHPLAGSGVGSWSSEFNRLQRAQNPAHI 301 Query: 329 ALEFSNVHLHNEIIEAGSLKGLMGI 353 ++ SN + H E + G G+ G+ Sbjct: 302 DID-SNGNPHQEYLLWGVQLGIPGM 325 >UniRef50_B5EA98 O-antigen polymerase n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EA98_GEOBB Length = 446 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 103/295 (34%), Gaps = 25/295 (8%) Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193 ++L L L M N E + + A+ + + + A K+ Sbjct: 135 TLLGCLTFLGIWGIEQQMLGNERLEGLGGAAWGDSNGVASVYVLFLPVALAFAYAAGKRR 194 Query: 194 HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 ++F+ + ++ ++ T++R LL I T I LL+A+L + Sbjct: 195 RFWIFMGVAAVMVALIVCTKSRGGLLGMVACLFCFAIYAR---KTAATFKIALLLALLVT 251 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 + + + ++D ++ S +R +++ GL +F ++P + Sbjct: 252 PFATDAYLERMKTLQGVSDTENF-----EGSARSRFILWQAGLMVFTRNPVVGTGFLTYP 306 Query: 314 ESMNLLVAEHNRLRGA------LEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA 367 E+ L + S HN I+ S G+ G L Sbjct: 307 EAKMEFEENFYHLEDHFREWVFRKESKKVTHNTYIQMLSDCGVFGALPFFLLMAGGIRSG 366 Query: 368 YKKR-----------ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 ++ R +L L + G+ G + + I + ++P I + +V+ ++ Sbjct: 367 FRARSRLKQEQREAPSLWLAGCSAGLTGFSVCIITIDSVTMPFIYVQLVVIGILS 421 >UniRef50_D2L620 O-antigen polymerase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L620_9DELT Length = 651 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 51/332 (15%), Positives = 109/332 (32%), Gaps = 19/332 (5%) Query: 95 DNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKES---VLYTLYSLSFLIAGYAM 151 +P Y++ ++ +F S L + + L TL+S+ +A Y + Sbjct: 152 TGTPAADAYYAVGAAWRLVLFASLGWALANGEEKAFRPLVRGIALGTLFSVVVGLAAYVL 211 Query: 152 YINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLAL 211 + D Y+ L V +L + N + V+ L Sbjct: 212 SSGAALSMDG-RLASLFFNPGWYAEYLCMTYPLVILLLQRSNLSKSVYVFIALSAIVVTL 270 Query: 212 TQTRATLLLFPIICVAALIAYYNKSPKKFTS--------SIVLLIAILASIVIIFNKPIQ 263 T RA ++F + + + + + ++ I + ++++ + Sbjct: 271 TMARAAWIIFLYLVLQTVFLLFKSHRVENAGGTPYLKGVAVCFSIVLCSALLAYHYLAVG 330 Query: 264 NRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEH 323 + ++ + T+ + RL ++ G+ I ++SP ES A L+ + Sbjct: 331 QKTSKDVVLTEKITDRLVHFTDTPRLTVFTGGVLIGLESPLVGYGYESYAWRYRQLMQDP 390 Query: 324 NRLRGALEFSNVHL----HNEIIEAGSLKGLMGIFSTLFLYFSLF--YIAYKKRALGLL- 376 + HN I+ S GL+G+ L F + + R GL Sbjct: 391 ESRLARAMPKDAEAFEATHNFFIQLFSGIGLLGVLVWTVLIGCAFRAWRFWAARGDGLAR 450 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 + L + +P + + +LL Sbjct: 451 AALASAIVFHLFGLFQEMTYVPPVWLLMFLLL 482 >UniRef50_Q2LRM7 O-antigen polymerase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRM7_SYNAS Length = 418 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 47/313 (15%), Positives = 104/313 (33%), Gaps = 33/313 (10%) Query: 111 KIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTAT 170 + +F ++ ++ ++ + + + A I + G Sbjct: 100 RYLLFVVALIDISQRLPVQKYLIVGMGVGVVWAVINLLSAHIIGYDLFGRPLIRYAGKLK 159 Query: 171 GAAYSTMLIGIVSGVAILYTKKNH----PFLFLLNSCAVLYVLALTQT--RATLLLFPII 224 +A L V+ + + + + ++ + QT R T L Sbjct: 160 ESARIAGLFAYVAPFFLGWAVSDKNMTTRRRIFIAVAGAFALVLVLQTNIRTTFLASAAG 219 Query: 225 CVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTS 284 LI + K + +IV+ A I +I I NDL +S Sbjct: 220 IAIYLIYFLYKKSRW---TIVIPALFFAGIALIAKFWIP-----YFNDL---------SS 262 Query: 285 LGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSN-------VHL 337 + R+ ++++ L ++ + P S ++ + A N H Sbjct: 263 IYDRIYIWKVALAMWQEHPLFGVGVGSFQDAYKSVAASGIVAPFVAPDGNIFSAPEAAHA 322 Query: 338 HNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA---LGLLILTLGIVGIGLSDVIIWA 394 HN ++ + G+ G ++L+ + Y+K +GL+ + + IGL+ +++ Sbjct: 323 HNFLLMLLACGGIAGFSMFVWLFVNAVRRMYRKPDGWRIGLISWPVVALLIGLTGWSVYS 382 Query: 395 RSIPIIIISAIVL 407 + IVL Sbjct: 383 DWYQAVFAYFIVL 395 >UniRef50_Q01S31 O-antigen polymerase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01S31_SOLUE Length = 561 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 102/322 (31%), Gaps = 25/322 (7%) Query: 94 VDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYI 153 P + Y S+ + +V + + ++LY + + + A Y + Sbjct: 64 FSPRPEISFYGSHWRQYGALAQAAVLVLSCAIAAHAMRATAMLYVVSAAGAVTALYGIAQ 123 Query: 154 NS----------IHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC 203 H + I V + Y + + + + + Sbjct: 124 YLGWDPILPAAAYHIGEGIWTIVRPPSTLGYVSYFATWL-LFVFFLSAALPGRFAKVCAA 182 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIF-NKPI 262 L + LT TRA L L+ P++ + + +A++ + +P+ Sbjct: 183 LALIAMLLTGTRAAFLGLVAGVAVWLLWRGFHVPRRTLLGGLAALVAIAALYVSPLGQPM 242 Query: 263 QNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE 322 ++R + D GAR ++ L + + P + E+ Sbjct: 243 RSRTRWFVEDPWG----------GARPLLWRDSLVMGLSRPLTGHGPETFTAVFPRY-ES 291 Query: 323 HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA--LGLLILTL 380 R +F++ HN ++A +G+ G+ F A+K RA L Sbjct: 292 AALARAYPDFAHESPHNIFLDALVQQGVPGLLLLAAWCALGFAAAWKLRASHPVLAPSLA 351 Query: 381 GIVGIGLSDVIIWARSIPIIII 402 + G+ A +IP +I Sbjct: 352 AALAAGIVSQQFTAFTIPTAVI 373 >UniRef50_A8VKG3 Wzy n=2 Tax=Gammaproteobacteria RepID=A8VKG3_VIBVU Length = 393 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 116/352 (32%), Gaps = 42/352 (11%) Query: 78 IFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLY 137 L G+L +IW R + + ++ + ++F + Y Sbjct: 64 FLLWGILSIIWS----------RNVDLAINMSLRMVLLLLSMIFTINLNNKDESLIKAGY 113 Query: 138 TLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL 197 L ++ + ++ + + R S GT + ++ G V + IL + + Sbjct: 114 YGLLLGIILNVPLTFSDAYYISGRFS---GTTINPNHISLFSGFVIFLTILNKRFLEKSV 170 Query: 198 FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 FLL Y++ T +R LLL + L K S ++ L + Sbjct: 171 FLLAIILSSYLIFQTGSRKGLLLALVAVSIYLFKLDEKKATLSYSVVLCLAGFTILFIFF 230 Query: 258 FNKPIQNRYNEALNDLNSYTNAN----------SVTSLGARLAMYEIGLNIFIKSPFSFR 307 N + + T N +S RL NIF+K P + Sbjct: 231 TNLDYLSTIHPTFFRFYELTQVNVSDLSREGFGGDSSTRWRLIFIVEAYNIFLKYPVTGI 290 Query: 308 SAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA 367 ++ + ++ HN +E S G +G+ YFS+F Sbjct: 291 GLDNFKTIFSE---------------ELYSHNNYVELLSTLGFVGLILYYLFYFSIFKYV 335 Query: 368 YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 ++ R + + + L + + + V + R + I ++L+ R + Sbjct: 336 FRNRNVFCIFIMLFFLSMDFAMVSYFER----MYILPLILIYFTTKRERPLE 383 >UniRef50_C5CXB6 O-antigen polymerase n=1 Tax=Variovorax paradoxus S110 RepID=C5CXB6_VARPS Length = 419 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 97/289 (33%), Gaps = 18/289 (6%) Query: 91 AFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYA 150 + S +H I + + + + + L L +++ G+ Sbjct: 74 HYPETGS---NLFHGLRIGLTILMAMALTREEAVWALRGFLLIAALNILLVVAYYAIGFP 130 Query: 151 MYINSIHENDRIS-FGVGTATGAAYSTMLIGI--VSGVAILYTKKNHPFLFLLNSCAVLY 207 ++ + + A + + ++ +A + P L+ ++ Sbjct: 131 IWSPLRAVVMEVGNKSISNALLFSVVASTAAVWGIAQIAAHRPLRAIPAFVLMLGLGLVV 190 Query: 208 VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYN 267 L LT + L L +I V + + + ++ ++ + + A++ + +Q++ Sbjct: 191 ALPLTSRTSVLALLLVIPVVCIHQWRSHLKMLVSALVLGAVVLAAALYQLPQ--LQHKVE 248 Query: 268 EALNDLNSYTNANS-VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 + ++ S R MY + P + + + Sbjct: 249 TGVEEIEKAQAGEIFKGSWVIRYYMYRDTGLMIADRPLTGWGIGGWTDQWHK-------- 300 Query: 327 RGALEFSNVHL-HNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG 374 RG F++ ++ HN+ + G+ GL + S L + + A+K+ + Sbjct: 301 RGPALFADSNMPHNDFLWVGAQGGLPALLSLLAIMAGAVWQAWKRPDIA 349 >UniRef50_C3KDB6 Putative membrane protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KDB6_PSEFS Length = 651 Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 108/341 (31%), Gaps = 45/341 (13%) Query: 54 CLLSLILRGR--QENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAK 111 LL L LR R +E I L L L+W D F+ H+++ Sbjct: 85 TLLLLCLRPREIKELLREPLAIAFLVFSAWALTSLLWSPEHHADTDLFKRPLHTFM---- 140 Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFG----VG 167 +F + L ++L + + + A G + Sbjct: 141 --LFAGCGLLLHYRNELFKPVFFSAAVIALVVCVCNLVAFSKGFEPGTGMRMIGGRGALD 198 Query: 168 TATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLAL-TQTRATLLLFPIICV 226 +++ + + T++ F + + A++ + L T +R L+ + + Sbjct: 199 NPLLSSHVFGFFCVYWLYICMTTQRLQVLWFSIPALAIMTLTVLATGSRTPLVALTLTIL 258 Query: 227 AALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLG 286 N+ + +VL A +++ + + I NR + Sbjct: 259 WMTFVSRNRRSALLIAGMVLGA---AGLLLFYPELITNRGSSF----------------- 298 Query: 287 ARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGS 346 R ++ + L + P+ S +S + L E H + Sbjct: 299 -RFELWGMSLQRIAEHPWIGHSYDS---------ELYLTLADGYELREPHSF--ALGVLY 346 Query: 347 LKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGL 387 G++G +F+ Y K+RA L IL ++ G+ Sbjct: 347 YVGIIGFIPWIFMIGWGLYKGLKERAQPLFILASSLLTYGI 387 >UniRef50_D1C2X5 O-antigen polymerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2X5_SPHTD Length = 512 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 85/236 (36%), Gaps = 25/236 (10%) Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIA-ILASIVIIFNK 260 + A L + L+ +R L +A L+ P + + + A + + Sbjct: 273 TLAGLVGIVLSFSRGAWLGTAAGLLAMLLVSARGLPIARVAIAGAVAVALFAGGMRYAPE 332 Query: 261 PIQNRYNEALNDLNSYTNANSV------TSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 +Q RY + ++ + + + + S+ R+A ++ G+ +F P + Sbjct: 333 AVQARYEQLVSQVRLFDSRQVIVTAENFASV-ERMAHWQTGIAMFQAEPLLGVGVGNYNA 391 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI-------- 366 H S H HN I + G +G+ + L+L + + Sbjct: 392 RFREF-QIHPGFPN----SAGHAHNYYIHTAAETGTLGLAAYLWLIGTALAVALRAARTT 446 Query: 367 ---AYKKRALGLLILTLGIVGIGLSDVI-IWARSIPIIIISAIVLLLVINNRNNTI 418 + LG + +T+ ++ + + + + + I + I A+ +L + N + Sbjct: 447 QDALSRAVGLGAVGVTVALMVHNVVENLHVLSLGIQLAAIWALAVLALYNPPWRGV 502 >UniRef50_A7AIE4 Putative uncharacterized protein n=5 Tax=Bacteroidales RepID=A7AIE4_9PORP Length = 607 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 89/324 (27%), Gaps = 45/324 (13%) Query: 111 KIFIFGSFIVFLTLTSQL----KSKKESVLYTLYSLSFLIAGYAMYI---NSIHENDRIS 163 K+ G +V L K L+ L + A + M + + Sbjct: 105 KLLFGGQLVVLWFLLRYFLTEAPCLKFFFLFVLMLTGLVEAVWGMQQLHGYAYSNHSLFR 164 Query: 164 FGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQ--TRATLLLF 221 Y L ++ + + CA ++ L +R+ + Sbjct: 165 LTGSFFNPGPYCGYLAVVLPVCLWTALRFQKGMHYFGWVCAGAILIVLPAGMSRSAWMAA 224 Query: 222 PIICVAALIAYYN---------KSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALND 272 + C + K T + ++AIL I ++ Sbjct: 225 VVACGWVYWTERIGWEKTKAVCRRYKNATIPFIAIVAILVGCTIAGVYGMKQ-------- 276 Query: 273 LNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEF 332 S RL M+++ + P + + + A + Sbjct: 277 ----------DSADGRLLMWKVTVKAIAGQPLAGTGLGGFPAAYAEAQGGYFATGNATDR 326 Query: 333 ------SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIG 386 + NE ++ G +G+ G+ + S+ Y + R G L + Sbjct: 327 EKRVAGCPEYAFNEYLQIGLEQGVGGLIVFVAWLGSMAYYGIRNRQQGTAGGVLALAVFA 386 Query: 387 LSDVIIWARSIPIIIISAIVLLLV 410 +S + +P ++ + L + Sbjct: 387 VSS---YPLQLPSFWVALVFLGAI 407 >UniRef50_D1Y330 O-Antigen Polymerase family protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y330_9BACT Length = 421 Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 78/234 (33%), Gaps = 20/234 (8%) Query: 198 FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 +L V+ L+ + + I L + + ++ + V I Sbjct: 184 RVLIVVPACLVVFLSFSSGAWMAAAIGGCFLLYWASRFKKIGISFLASGAVVLVLACVAI 243 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGA----RLAMYEIGLNIFIKSPFSFRSAESRA 313 + + + + + Y S+ +GA R ++ + K P + E Sbjct: 244 NARSGGSLWRKIATE---YRQVTSMRDMGAFTTYRNEIWNASAYLIRKRPITGWGGEKFL 300 Query: 314 ESMNLLVAEHNRLRGAL-EFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA 372 + L G + + +H H+ + L G+ G+ L Y A++ Sbjct: 301 RLYHELFRTKADELGLKYQANGMHPHSTFLNVAYLAGIPGLVLFLAAYAVSLKKAFRLAR 360 Query: 373 ----------LGLLILTLGIVGIGLS-DVIIWARSIPI-IIISAIVLLLVINNR 414 + L IL L ++ L+ DV++ R + +LL++ + R Sbjct: 361 TENGRSFPWGVALFILLLTVLAYALTADVLMGRRDTSVMFWCFWGILLILPDGR 414 >UniRef50_B9KZC7 O-Antigen Polymerase family n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZC7_THERP Length = 499 Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 53/158 (33%), Gaps = 11/158 (6%) Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI-IFN 259 + A L + L+ +R L ++ + +++A+LA+ Sbjct: 267 GATASLSGIVLSFSRGAWLGTSAGLAIFVLLVPRGLRRSALVIGAIVLAVLAAGGWNELP 326 Query: 260 KPIQNRYNEALN-----DLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 ++ R ++ D+ ++ ++ R+A ++ +F+ P + A + + Sbjct: 327 AAVRERMTLLVSYGRPFDVRDVQLTDANWAVVERMAHWQAAWAMFLDHPLTGVGAGNFSV 386 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMG 352 + H HN + + G+ G Sbjct: 387 HF-----PDYSPHPVFRIARGHAHNYYLHILAELGIPG 419 >UniRef50_C2FRP7 O-antigen polymerase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FRP7_9SPHI Length = 718 Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 44/388 (11%), Positives = 123/388 (31%), Gaps = 51/388 (13%) Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 +S+F ++ +++ S F + + + + + ++ L + + Sbjct: 91 VSLFFKQIIPILFISFFVLSG---ISIFAGLNKVEGLLEYAAYTTTLISFLNIFTLIFLA 147 Query: 136 LYTLYSLSFLIAGYAMYIN---------------SIHENDRISFGVGTATGAAYSTMLIG 180 + +S ++ +Y + I + G + ++ Sbjct: 148 KDNIKVISIIVTCIVLYQSGAELYKFIREVNTLPLWEAILNIKWTTGNKNIFGATLIVKL 207 Query: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA-----LIAYYNK 235 L TK ++ LL L L RA + +I + ++ + ++ Sbjct: 208 CFVVYTFLRTKGIFRYIALLTYFIALLTLFFISARAIYISSTLIILFITLGTTILYWKSE 267 Query: 236 SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANS-------------- 281 +LI++ +I +K + + + + + S Sbjct: 268 KRNSTLLHNAVLISLFIISFLIVDKTLTKYSKDGSDKQINTEQSQSSSFIEERAQTITDF 327 Query: 282 -VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNE 340 + RL M++ L + P + + + ++ ++ HN+ Sbjct: 328 DNSGTNIRLFMWKASLEGIKERPLLGYGLGNYKIESSRITGKYYTSNVFNRYN----HND 383 Query: 341 IIEAGSLKGLM-GIFSTLFLYFSLFYIA--------YKKRALGLLILTLGIVGIGLSDVI 391 ++ G++ G+ F+ Y ++R +++ GI+G + V Sbjct: 384 FLQVAFESGIITGLLYFGLFVFAFIYTLKILFKKEYNQERKFAAILIFSGIIGYFIDSVF 443 Query: 392 IWARSIPIIIISAIVLLLVINNRNNTIN 419 + + P + I ++LL + ++ Sbjct: 444 NFPLARPNMNIMFVLLLAMTIANYVSVK 471 >UniRef50_D1BLV4 O-antigen polymerase n=3 Tax=Veillonella RepID=D1BLV4_VEIPT Length = 413 Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 106/277 (38%), Gaps = 20/277 (7%) Query: 118 FIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTM 177 ++ L + Q K +++L +++ Y +Y + + A + Sbjct: 104 MLIILYMCYQDKKSVDTLLKIGMWTGYIVCFYTVYFYGLDYFITVLSSSARIANDALNAN 163 Query: 178 LIGIVSGVAIL----YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYY 233 +G++ AI+ Y + P + + + L +LA T +R L+F + L + Sbjct: 164 TVGLLGANAIVMTLYYMLYDRPRWWHIIALPTLGILAATGSRKA-LVFVGVGTVLLFIFK 222 Query: 234 NKSPKKFTSSIVLLIAILASIVIIF-----NKPIQNRYNEALNDLNSYTNANSVTSLGAR 288 + +SIV +I L + II + N + ++T +S R Sbjct: 223 SFRSANAVNSIVKVIGSLLGLTIIGIAVLQLPMFSEVLDRMSNMMEAFTGTGGDSSTIIR 282 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLK 348 LA+ +IG ++F +SP + + + + + N LHN IE + Sbjct: 283 LALVDIGWDLFYQSPITGVGINNPSVYTFFVYGKDNYY----------LHNNYIELLAGT 332 Query: 349 GLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGI 385 G++G+ + +Y + Y + R + + ++ Sbjct: 333 GVIGLIAYYSMYLYVAYNLIRYRDIHSNEYIMVLILF 369 >UniRef50_B5FFG9 O-antigen polymerase, putative n=1 Tax=Vibrio fischeri MJ11 RepID=B5FFG9_VIBFM Length = 445 Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 107/284 (37%), Gaps = 29/284 (10%) Query: 118 FIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSI------HENDRISFGVGTA-- 169 F +F+ + K+ +L+ + F ++ Y + + RI F V A Sbjct: 108 FFIFIAYWLKAKTTSVYLLWFSMLIGFALSFYIHSDHFVQDLIQGAHGLRIDFNVNNAQH 167 Query: 170 ----TGAAYSTMLIGIVSGVAI-LYTKKNHPFLFL-----LNSCAVLYVLALTQTRATLL 219 +G A+ + I+ + + T K +L L L + ++V+ TQTR L Sbjct: 168 PALWSGLAFLLLSYFIIKYFYLAIQTNKTIKYLTLTFGLMLINLFFIFVIFATQTRQVFL 227 Query: 220 LFPIICVAALIAY---YNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY 276 I C+ A Y P + ++ +++LA I + ++ R + + Sbjct: 228 GLMISCIFAPFIYSLLQKNQPSLKLTLPIIFVSVLALIAMTNISTLEKRTSTESSTYKKL 287 Query: 277 TNANSVT----SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEF 332 + S G R+ ++ + P + R + + L R+ + Sbjct: 288 LMGDIDNIPYDSSGIRINIWYEAYGWIQERPILGSGQDIRDDVILLS----KRIPENIRT 343 Query: 333 SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLL 376 + HLHN IE G++G+ LF+++ L + K LG Sbjct: 344 TINHLHNSFIEVTLSYGIIGLALILFMFYWLLHSTSKLVPLGQF 387 >UniRef50_B2HZX0 Lipid A core-O-antigen ligase n=8 Tax=Acinetobacter RepID=B2HZX0_ACIBC Length = 542 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 83/213 (38%), Gaps = 11/213 (5%) Query: 175 STMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYN 234 + +++G++ + + K +L ++ +L+ +AL+Q+R + ++FP + + ++ + Sbjct: 165 TFLIMGLLGCLFLYEKNKATVWLLFPSALIILFTIALSQSRTSWVVFPFLLIYWIVKLFG 224 Query: 235 KSPKKFTSSIVLLIA---ILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGA-RLA 290 K + L A ++A +++ F + ++ A D+ ++ S G R Sbjct: 225 KQKRFGFIQGFLWCAGFFVIAGVILPFATSLIEAWSSA--DVAQASSLVERASSGYLRFN 282 Query: 291 MYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGL 350 ++ L + P+ + + A HN +++ G+ Sbjct: 283 IWTQMLLAVQQHPWLGYGWNQTSVAQMSAYALFPTTEWTTS-----AHNILLDLIIWNGI 337 Query: 351 MGIFSTLFLYFSLFYIAYKKRALGLLILTLGIV 383 + + F ++ + I+ + +V Sbjct: 338 PIGIVIIAYFACWFLWLNQQAKETISIIAIMMV 370 >UniRef50_B0N8X1 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N8X1_9FIRM Length = 388 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 70/222 (31%), Gaps = 27/222 (12%) Query: 191 KKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 + + +C ++L +T R + + LI + S++ L+ I Sbjct: 183 NVKKQLYYFIVACLNFFLLYMTGCRTAFVATAGAMLVFLII----NKNYRICSLIGLLCI 238 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 + I IFN R + +++ R ++ + P + Sbjct: 239 IGGIYFIFNPEQFPRIEKLVDNFT------------VRTKIWHAAIEGIKAHPLFGQGPM 286 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 + H H+ ++ G++G+ + + F +K Sbjct: 287 TYMMIFKQYGG----------HVTQHAHSVYLDPILSFGVVGVATLVPYMFDNCKRLFKV 336 Query: 371 RALGLLILTLGIVGIGLSDVIIWAR-SIPIIIISAIVLLLVI 411 L + + +V ++ +++ I + +L L+I Sbjct: 337 YQEKLNLRYVALVISCIAVILLHGVLDYTIFWVHTGMLFLLI 378 >UniRef50_B7GVQ4 O-Antigen Polymerase family protein n=5 Tax=Acinetobacter baumannii RepID=B7GVQ4_ACIB3 Length = 542 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 84/213 (39%), Gaps = 11/213 (5%) Query: 175 STMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYN 234 + ++IG++ + + K +L L ++ +L+ +AL+Q+R + ++FP + + ++ + Sbjct: 165 TFLIIGLLGCLYLYEKHKVTLWLLLPSALIILFTIALSQSRTSWIVFPFLLIYWMVKQFG 224 Query: 235 KSPKKF----TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLA 290 K + + I I+ + I+ N + + +S+ S R+ Sbjct: 225 KQKRFRFVQGLLWCLAFFLIAGLILPYITQFIEFSTNTEITETSSFVA--RAGSGHERIG 282 Query: 291 MYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGL 350 M+ L+ + P+ + ++ + G + HN +++ G+ Sbjct: 283 MWIQILHAIAQQPWLGYGWSQTSVAVVDSIQ-----YGTVHVWFNSAHNVLLDIIIWNGI 337 Query: 351 MGIFSTLFLYFSLFYIAYKKRALGLLILTLGIV 383 + + F ++ + I+ + +V Sbjct: 338 PIGIVIIAYFACWFVWLNQQAKETISIIAIMMV 370 >UniRef50_C6JNS2 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JNS2_FUSVA Length = 401 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 54/405 (13%), Positives = 141/405 (34%), Gaps = 34/405 (8%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 +E++ + +I AF+++ ++K+ + + +L L+ + N N + + +F+ Sbjct: 10 IELLGEYTSYLYIISAFINSKLNMKLGYLLVGLGILKLLFWREKVNINKRVYGMFSFLFV 69 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 +G++ S F V S + + F VFL+ +LK + Sbjct: 70 LGII-----SNFIVSKSNGINVF--INENGRFFYAAFLFVFLSGKDKLKK-----IDISI 117 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL 200 +L ++ + + + ++I + + K+ + ++ Sbjct: 118 NLGVILLCIGILMKNEWVMKGSYSRQRGILIIGIVYIMINFLECI----LKEKYTNFYVF 173 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 LY + +R + + + + LI ++ ++ + + Sbjct: 174 PLVLSLYSIVELDSRMAVFVILLCLMLYLIFIIFFRKGYKIKRLLAVLILGGVLGYNLLP 233 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES----- 315 N + + + + ++ S R+ M++ G++IF ++ Sbjct: 234 ------NSFIEKVKTSFHTSNNVSNEDRIVMWKAGIHIFKENYLLGIGTSEEDVKPLLIE 287 Query: 316 --MNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA- 372 + E R + LH+ ++ G++G+ L+ + Y Y+ + Sbjct: 288 YVDKNIEKEVLRNEFIRDRKFSRLHSMYVDFFVQNGIIGLLYIGLLFIIIPYEFYRSKKG 347 Query: 373 ---LGLLILTLGIVGIGLS-DVIIWARSIPIIIISAIVLLLVINN 413 L +G G++ V SI + + L+L++ N Sbjct: 348 RIETALFFSIIGFYIYGITWSVWSDYGSIQALFQIVLALMLIVGN 392 >UniRef50_B5YIP3 O-Antigen Polymerase family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIP3_THEYD Length = 623 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 93/285 (32%), Gaps = 12/285 (4%) Query: 90 SAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGY 149 SA+ V +H Y T K +F ++FL+ + + + Sbjct: 105 SAWLVGGFVLWFAFHQYELTQKQKLFIFLLIFLSAVIESLIGIIQFFGLYRYIPVTPSPE 164 Query: 150 AMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVL 209 A + + + + A + + +VS + LF + L Sbjct: 165 AGMVGGVFQQKNLFASW----VATGLIVSLYLVSTAWLRSFSSFKKILFFAGIFLLSLSL 220 Query: 210 ALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIV---LLIAILASIVIIFNKPIQNRY 266 + Q+R LL + + + + V L IA +++ + + Q Sbjct: 221 IIAQSRTGLLGVVLAIILIFLVRRKTYKPIKKTVFVWLMLFIAGVSAGFFLLSVKDQLGI 280 Query: 267 NEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES-----MNLLVA 321 + + + S R+ MYE ++F ++PF+ + + + + Sbjct: 281 EKLAVKKIKWFSDPEQVSYRERILMYETSFDMFKENPFTGQGFSNFGSLYMYYQAKVKKS 340 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 + +G H HNE+ + G+ GI L L + + Sbjct: 341 NPDYYKGTGNQYTHHPHNELSLIVAESGIFGILGVLCLLYGILKF 385 >UniRef50_B4CZW4 O-antigen polymerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZW4_9BACT Length = 641 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 54/367 (14%), Positives = 120/367 (32%), Gaps = 58/367 (15%) Query: 23 IITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIG 82 + L ++I V FS+ Y + A LLS + + L+ P ++ L+ Sbjct: 8 LFALALICIQVLIGGVKLVFSLPGYALLAGGALLSFLAVKK--------LVRPPALCLVT 59 Query: 83 LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTL-----TSQLKSKKESVLY 137 +L L + + +SP + L + G+ IV+L ++++ L Sbjct: 60 VLTLAGWVIARALSSPVEYLARADL----FMVLGALIVYLLTVMYYTDTRMRLALTGALL 115 Query: 138 TLYSLSFLIAGYAMYIN----SIHENDRISFGVGTATGA-------AYSTMLIGIVSGVA 186 + + +I + R A+G A +I +++ Sbjct: 116 IVALVHVVIGAIQFKQADNFMLLPGIMRPPAYEWRASGFYICPNHLAGLLEMIAMLALGQ 175 Query: 187 ILYTKKNHPFLFLLNSCAV--LYVLALTQTRATLL-------LFPIICVAALIAYYNKSP 237 + L CA+ L +A+T +R L F ++ + A+ Sbjct: 176 ACWGASRPALRVLAAYCALMCLAGVAITGSRGGYLSVVFGLGAFAVLSLWAVQLTRRGGF 235 Query: 238 KKFTSSIVLLIAILASIVIIF---NKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEI 294 + +++ I ++F ++ + R + Y N RL +++ Sbjct: 236 WLMFAGLLVSAVIFVGGGLLFMSQSETLHARLGQI------YEPHNP------RLLLWQA 283 Query: 295 GLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIF 354 L F +P + + ++ +H H++ +E + G++G Sbjct: 284 ALKQFHLNPTFGTGSGTYLYYGRQF--RFPVVQNDP----MHAHDDYLELLAEYGVIGAA 337 Query: 355 STLFLYF 361 Sbjct: 338 LGGLFLL 344 >UniRef50_C6CP08 O-antigen polymerase n=2 Tax=Dickeya RepID=C6CP08_DICZE Length = 402 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 16/205 (7%) Query: 166 VGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCA-VLYVLALTQTRATLLLFPII 224 V A + + + L + A L +A ++RAT ++ Sbjct: 151 VNHAAIYNAIICGMALAVLFSYWSLLSVASRLMWIAMLALSLVYVAFGESRATFGAILVV 210 Query: 225 CVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTS 284 + + + KS K + ++A V+ + + + NA+ Sbjct: 211 MLVLGVGFARKSKKFLLLPAFFIAGLIAVAVLSNARVV----------VKQEQNASDNNV 260 Query: 285 LGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEA 344 L R ++ ++ + P E+ + + H HN I Sbjct: 261 LSYRDTIWLSAFDVVKQHPLFGVGKENFEKIDINKWQDKPLFTHV-----SHAHNIFINV 315 Query: 345 GSLKGLMGIFSTLFLYFSLFYIAYK 369 + G+ G F L+ ++ + Sbjct: 316 LTENGIWGAFWVFGLFGAMGVTLIR 340 >UniRef50_B8IY99 O-antigen polymerase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IY99_DESDA Length = 459 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 72/231 (31%), Gaps = 27/231 (11%) Query: 151 MYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLA 210 + + R++ Y + + G+ + + LL S AVL+ Sbjct: 162 FLMGYPLHSGRLTGSFDDYEVGNYIALALIPAFGLWFILRQFFSRLPSLLLSTAVLWPAF 221 Query: 211 L----TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRY 266 +R+ L L+ + S + + A++++I + R Sbjct: 222 FLLAGAGSRSGALAIAAAMGLWLLLTGSSSVRWK-----GPLFAAAALLLILVAQGRARL 276 Query: 267 NEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 + + D R +++++G +F++ P+ A + L + Sbjct: 277 DAVVED--------------GRWSLWKLGWRVFLEHPWFGAGAGQYNAAFRSLGLSPEKD 322 Query: 327 RGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLI 377 + H HN ++ GL+G + + Y + L Sbjct: 323 A----ITISHPHNIYLDMLYAHGLVGFALGMIFLLGFSWWGYTRIRPRLQA 369 >UniRef50_C5NWF6 Licd protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWF6_9BACL Length = 718 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 65/443 (14%), Positives = 146/443 (32%), Gaps = 59/443 (13%) Query: 13 YTLKSSMILEIITYILCFFSMIIAFV-DNTFSIKIYNITAIVCLLSLILRGRQENYNIKN 71 + + + IL + Y +C + + F+ N + I+ ++ + Sbjct: 10 FKINLAFILIVAVYCMCGLIVPLQFISANKVVAGGMTLLGILLATYNLVIKKVYLKIKTI 69 Query: 72 LILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSK 131 L L L + ++ S N + Y F +F +T + K Sbjct: 70 EYLLLFFALNIITSILVISYGYSTNIKNTLVFFIY-------FLTVFPIFTGITREEGKK 122 Query: 132 KES-VLYTLYSLSFLIAGYAMYINSIHENDRI----------SFGVGTATGAAYSTMLIG 180 YT+ L+ ++ + + R+ F G S + Sbjct: 123 IYDYFFYTVTVLNTFGVLVSLIQFVLLKGYRVHDYKGLYIRQGFVESRLFGILASPNFLS 182 Query: 181 IVSGVAILYT-------KKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA-LIAY 232 ++S + I++ +K + ++ L+ + L+ +R + I + + Sbjct: 183 LISLIVIIFLVLKICSFEKVYRYISLVTIVLNFIYIVLSGSRTAFICMMIAAAIYSIAMF 242 Query: 233 YNKSPKKFTSSIVLLIAILASIVII-----------FNKPIQNRYNEALNDLNSYTNANS 281 Y K + +VL I ++ + ++ + + N+ N+ + + Sbjct: 243 YQKGNIRSLFKVVLAIVVVLFSYKAVNFTSEQYLHYNKERLEAQDKKLENEDNNLSLERT 302 Query: 282 VTS----LGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHL 337 TS R A+++ + K P S + E + E ++ H Sbjct: 303 DTSEENISNNRFAIWKSTASFVPKKPIFGYSGGNWYEIGKKINPEEYIIK-------EHY 355 Query: 338 --HNEIIEAGSLKGLMGIFST----LFLYFSLFYIAYKKRALGL----LILTLGIVGIGL 387 HN +E GL G S L + S+ ++ + L L+ + I+ + L Sbjct: 356 LTHNGYLEILFYNGLAGFISMGIFVLSFFVSMIKRIFRDKEEDLVNKDLLSMIMILMVIL 415 Query: 388 SDVIIWARSIPIIIISAIVLLLV 410 + + + I + I+L L+ Sbjct: 416 VSNLFLSSTFYGISLLGIILFLM 438 >UniRef50_C1F2S5 O-antigen polymerase family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F2S5_ACIC5 Length = 478 Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 60/181 (33%), Gaps = 13/181 (7%) Query: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIIC-VAALIAYYNKSPKK 239 +V A++ + + ++ VL L+ +R +L ++ V L A + + Sbjct: 214 MVLATAVVLAMRRRGLVVAASAVLFFGVLGLSGSRGAWVLEAVLLAVTVLFAVLRHAEHR 273 Query: 240 FTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIF 299 + +L + + + R E + + T G R +++ Sbjct: 274 TRAGALLAAGVAGVASLALLYAGRTRLMEWM--------GRNATLSG-RTEIWQAVWPFV 324 Query: 300 IKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFL 359 ++ P+ A + A+ F H HN ++ G +G+ L Sbjct: 325 MRKPWLGWG---YAAFWRGWTGPSFDVSSAVHFLVFHAHNGYLDLWLQTGAIGLGLFLLA 381 Query: 360 Y 360 Y Sbjct: 382 Y 382 >UniRef50_B5EPG9 O-antigen polymerase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPG9_ACIF5 Length = 686 Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 46/322 (14%), Positives = 110/322 (34%), Gaps = 49/322 (15%) Query: 72 LILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSK 131 + + L + GL L W SP+ + ++ ++ G+ + ++ + + Sbjct: 67 IFMLLWLLWFGLT-LFW------SGSPYTSWFY-------FWVLGALPLTFLISVMIPAP 112 Query: 132 KESVLY-----TLYSLSFLIAGYAMYINSIHENDRISFG--------VGTATGAAYSTML 178 + + +++++G A++ + + T + AA+ +L Sbjct: 113 VAERAWPWFWRGILLSAWILSGMALWQYYHWMGQGVGLSGLRPYGPLLDTNSFAAWLNLL 172 Query: 179 IGIVSGVAILYTKKNHPFL-----------FLLNSCAVLYVLALTQTRATLLLFPIICVA 227 + V ++ +K +L +L T +R LL + + + Sbjct: 173 FFPILAVYLIDDEKRGTRFGSLQLNMVGLFYLATLTVILLAFFSTNSRGGLLAW-VSTMP 231 Query: 228 ALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGA 287 + + + P + V+ L S ++ + ++ S A Sbjct: 232 FVFWAFGRRPGGWARMAVITAVALISFSLLGYPQGYDLLGHLAPGFITHN-----LSTVA 286 Query: 288 RLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSL 347 R M+ ++F+ P+ S + RL G L + + HN+ +E + Sbjct: 287 RGLMWVATWHMFLSHPWLGTGLGSYFLNYPAY-----RLPGELASAGTYAHNDYLEYLAE 341 Query: 348 KGLMGIFSTLFLYFSLFYIAYK 369 GL+ + L +L Y Y+ Sbjct: 342 GGLINLGFLLGFAATLMYALYR 363 >UniRef50_C6NU14 O-antigen polymerase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NU14_9GAMM Length = 694 Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 69/174 (39%), Gaps = 11/174 (6%) Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 +L+ + +T +R L + + ALIA+ ++VL I + A + Sbjct: 207 LFYLVTLTLTTFAFWMTYSRGGALAWLCTFLVALIAFRKTPGFGRKLALVLAIEVAAYAI 266 Query: 256 IIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES 315 + + Y+ + Y +++ T +R M+ +IF+ P+ S Sbjct: 267 FGY----LHHYDMLGHLAPGYISSSIETV--SRGLMWIATWHIFLSHPYLGTGLGSY--- 317 Query: 316 MNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 L RL G L + + HN+ IE + GL+ + L +LFY Y+ Sbjct: 318 --FLFYPAYRLHGELASAGTYAHNDYIEFLAEGGLINLGFLLAFAGTLFYALYR 369 >UniRef50_Q72GL1 Hypothetical membrane spanning protein n=1 Tax=Thermus thermophilus HB27 RepID=Q72GL1_THET2 Length = 479 Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 35/263 (13%) Query: 158 ENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRAT 217 R +G + ++ ++ ++ VA ++ LL L TQTR Sbjct: 192 GIYRGQMPIGLTSHRGHAAGVLALLGLVAAGLYLRSPRPGLLLLFGLGALALWFTQTRGG 251 Query: 218 LLLF--PIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNS 275 L + +A + + + ++ L+ A+ + + + S Sbjct: 252 WLALWGTLALLALGLTWKRPGRLRPALALFLVGALSYGLYLALGQMGVQEPRRFPELGAS 311 Query: 276 YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA---------------------- 313 + AN+ +S RL ++ L P+ + A Sbjct: 312 FAEANAYSS--GRLELWRKALAALPLRPWLGWGFDGYARASPHAVDWNGEDRRFVPAALS 369 Query: 314 --------ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY 365 E + + LR HN ++ G++G + L + Sbjct: 370 LPVRLVQGEDRLFYLEDPTGLRLLAPAPYAKAHNLFLDLLLSVGVLGGAAYLLWLGAALR 429 Query: 366 IAYKKRALGLLILTLGIVGIGLS 388 A + L + G + GL+ Sbjct: 430 QASWAKLPFALAV-AGYLLYGLT 451 >UniRef50_A1SRW5 O-antigen polymerase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRW5_PSYIN Length = 579 Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 65/364 (17%), Positives = 127/364 (34%), Gaps = 35/364 (9%) Query: 48 NITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYL 107 N+ I + + L + K ++ L+ L + F +N +Y Sbjct: 41 NVVWIFFSVLISLGLWKITVQQKIFYSRFTVVLLSAFILFYIPLFYPNNELADQSY---- 96 Query: 108 NTAKIFIFGSFIVFLTLTSQLK--SKKESVLYTLYSLSFLIAGYAMYINSIHENDRI--- 162 T I +F ++F++L E +L + F+ A Y++ + + + I Sbjct: 97 -TRLIGLFAGILLFISLQQFQFDKKNLEKLLLLIVLAGFIQACYSLMQDYLLPANNIFGY 155 Query: 163 SFGVGTATGA-------AYSTMLIGIVSGVAILYTK-KNHPFLFLLNSCAVLYVLALTQT 214 G G G A I++G + K K LL++ ++V+ +T + Sbjct: 156 DVGYGRPYGIFQQPNVLASFMATTLILAGYLLQQIKDKKLQIFLLLSALLNMWVITITVS 215 Query: 215 RATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLN 274 R L I V + + S +KF I+ + L + R ++ Sbjct: 216 RTGYLGLLIAFVLFIPWAWQSSKRKFGIFILAIFLGLGLASTKGGDILGKR------NIA 269 Query: 275 SYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES-MNLLVAEHNRLRGALEFS 333 + T G RL Y ++ K P ++ + + E Sbjct: 270 NMTEG------GGRLTHYSNSWDMIKKHPLIGYGYGGFEKNYLINTAERVKNSKSKPEHQ 323 Query: 334 NV-HLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR---ALGLLILTLGIVGIGLSD 389 ++ H HNEI+ G++ I + L L + ++ K R A+ L L + I ++ Sbjct: 324 HLTHPHNEILFWAIEGGVVPIVAILLLVIAFIHLLGKFRLTHAMALSTLVIPIAVHTQTE 383 Query: 390 VIIW 393 + Sbjct: 384 YPFY 387 >UniRef50_B5LBK8 Putative phosphotransferase LicD4 n=1 Tax=Streptococcus pneumoniae RepID=B5LBK8_STRPN Length = 717 Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 117/356 (32%), Gaps = 59/356 (16%) Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS-FLIAGYAMYINSIHENDRI-------- 162 I+ F + VF + T + V +++ +++ + +++ + + R+ Sbjct: 103 IYFFAIYPVFQSFTVKKARALFDVFFSVITVANTIGVLVSIWQFFMLQGYRVFDYKGLLI 162 Query: 163 --SFGVGTATGAAYSTMLIGIVSGVAILYT-------KKNHPFLFLLNSCAVLYVLALTQ 213 F G S + I+S + ++Y K L + + + L+ Sbjct: 163 RQGFVESRLFGILASPNYLSIISLMVVIYLWMRLSIYKPVLKTLAITSILLNFAYIVLSG 222 Query: 214 TRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI------------IFNKP 261 +R T + ++ + + N + K + VL+ L + + Sbjct: 223 SRTTYICLVVVALLYALMTANWTKKIKSLLTVLVTVGLVFVCYNGIKYSSDIYLKAHSAQ 282 Query: 262 IQNRYNEALNDLNSYTNANSVTS----LGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 IQ N N+ + + TS R A+++ + + P S + E Sbjct: 283 IQKNQENGQNGDNNLSLERTDTSEENISNNRFAIWQSTASFIPRRPLFGYSGGNWYELGK 342 Query: 318 LLVAEHNRLRGALEFSNVHL--HNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK----- 370 A ++ H HN +E G+ G S + KK Sbjct: 343 EYDASAYIIKQ-------HYLTHNGYLELLFYDGITGFIPMAIFILSFIVSSLKKYKKDL 395 Query: 371 ----RALGLLILTLGIVGIGLSDVIIWA-------RSIPIIIISAIVLLLVINNRN 415 R L+ + L V I +S++ + + + + +IS ++ R+ Sbjct: 396 QEGRRNHELITILLMTVVILISNLFLSSTFYGISLQGCILFVISGYYFSVLYKKRD 451 >UniRef50_Q0B1E1 O-antigen polymerase n=9 Tax=Burkholderia RepID=Q0B1E1_BURCM Length = 442 Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 106/312 (33%), Gaps = 25/312 (8%) Query: 77 SIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTL-TSQLKSKKESV 135 + + GLL L + +Y Y + F+ + I+ L + L K Sbjct: 45 CLSVFGLLALGSTLLYDPQALL---SYDFYRHDGNFFVSYAPILAGCLYSHDLDLDKALR 101 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGT------ATGAAYSTMLIGIVSGVAILY 189 + ++++ + YA+Y+ S + A AA + + G+A Sbjct: 102 RFFVFAVLANLPPYAVYVAQNGLLAIFSNANDSFGSYFIARNAAGGFLAMLFCLGLACYV 161 Query: 190 TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIA 249 + + L LL A+ + R ++L L+ ++ V Sbjct: 162 KRHDKLVLGLLVLNAMFVFSTYS--RGSMLGMATAIAYLLLGRKRWLVAVLMAAAVAF-- 217 Query: 250 ILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTS-LGARL-AMYEIGLNIFIKSPFSFR 307 Q+ + ++ ++ + ++ T+ + R ++ L F SP Sbjct: 218 ----SFGAAWNHTQSAVDYMAHE-HTVRDVDAKTANVDVRFGWLWPRALAYFEASPIIGM 272 Query: 308 SAESRAESMNLLVAEHNRLRGALE----FSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSL 363 S + ++ +V + + ++ H HN + + G++G+ L Y+ L Sbjct: 273 GVGSFDDEVHDVVNYFGVVGQPRDVTVLHTDAHAHNSYLHIAAELGVIGLALMLAFYWHL 332 Query: 364 FYIAYKKRALGL 375 A + A L Sbjct: 333 VKWAVEGAASTL 344 >UniRef50_B5YJ59 O-Antigen Polymerase family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJ59_THEYD Length = 420 Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 82/268 (30%), Gaps = 22/268 (8%) Query: 134 SVLYTLYSLSFLIAGYAMYINS--IHENDRISFGVGTATG----AAYSTMLIGIVSGVAI 187 VL+ + L + Y Y N + G G A Y TM+I + I Sbjct: 113 RVLFFSSIIFSLYSFYDFYRNGGNWFSVTYKAGGFRDPGGGEVAALYHTMVIPFIFWGLI 172 Query: 188 LYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLF---PIICVAALIAYYNKSPKKFTSSI 244 K F +L L L +T RA ++ L+ + Sbjct: 173 YLQDKKQKFFLILALVINLLALHITFVRAGIIALGLHVFFSSLLLLKEKKFFISLLLVIL 232 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTN---ANSVTSLGARLAMYEIGLNIFIK 301 + ++ + +F + R + +S+ RLAM++ ++ + Sbjct: 233 LSILTFVYIEKKMFREMHTERIPSISEYFKMKPEEIAGYNPSSMKQRLAMWKTAIDKISE 292 Query: 302 SPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF 361 +PF L + R F HN I G+ G+ L++ Sbjct: 293 NPFYPHGYGRF------LFGKTVRNENNKHFIYPQTHNTFIGIAFELGIQGLIVFLWMIT 346 Query: 362 SLFY----IAYKKRALGLLILTLGIVGI 385 + F K + + + ++ + Sbjct: 347 AFFIVCLKYWLKSQDTLIKYFSASLMTM 374 >UniRef50_Q3SPX7 O-antigen polymerase n=2 Tax=Nitrobacter RepID=Q3SPX7_NITWN Length = 426 Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 115/347 (33%), Gaps = 36/347 (10%) Query: 34 IIAFVDNTFSIKIYNITAIVCLLSLI----LRGRQENYNIKNLILPLSIFLIGLLDLIWY 89 ++ + +S I+ + ++ L+ L+ R + + LP+++F + + ++W Sbjct: 36 VLMAISLPWSTTIFGVFTVLWLIMLLTVIDARQFRFQFRRPAYWLPVALFCLAAIGMLW- 94 Query: 90 SAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGY 149 ++P+ A H+ + K + L Q + + + L L Sbjct: 95 -----ADAPWAARIHAAGSVVK------LLAIPLLMHQFERSGKGLAVFLAFLGSCTVLL 143 Query: 150 AMYINSIHENDRISFGVGTAT---------GAAYSTMLIGIVSGVAILYTKKNHPF---L 197 A+ S E I G + + G + +++ ++ L Sbjct: 144 ALSWLSWFEPRVIPAHDKIPGVPVKNWITQGVEFVLCIFGSAALAIVIWRRQRRYAAAGL 203 Query: 198 FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 LL + L + + +R L+ PI+ + + Y + IAI A++ Sbjct: 204 VLLGAAFFLNMALVASSRTALVSLPILLLISTFRYMKWREALILYT---AIAITAALTWF 260 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 +Q R S + + +G RL + L +P + S Sbjct: 261 LAPNLQERIASIQQQYASSQSQQTS--VGLRLEYWTKSLRFIRNAPLAGHGTGSIRSLFE 318 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 + + HN+ + G++G+ ++ S F Sbjct: 319 REAGGEAVTDNQI---VANPHNQTLYFALEWGVIGVILLYAMWLSHF 362 >UniRef50_Q11XH7 Lipid A core--O-antigen ligase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11XH7_CYTH3 Length = 416 Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 108/330 (32%), Gaps = 28/330 (8%) Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 L I +I L+ ++W + +Y + KI + + F + + V Sbjct: 72 LPILIIYLIGVLWTDDY---------SYWTERVQVKIPLLFLPLGFWAVKDSITRATIDV 122 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAA--------YSTMLIGIVSGV-- 185 L ++ +I + I+ A + I + + Sbjct: 123 LIMIFISLCAATALGSFIYYLLHYKEITESYKHAKTIPTIIEHIRYSLLLTIAFFASIQA 182 Query: 186 ----AILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFT 241 +++ TK + L L++ L+ R+ LL C LI KS K Sbjct: 183 YLTSSVMVTKVQKGIVAGLGIFLFLFLHVLS-IRSGLLALYTTCFLWLIIQVFKSGNKKL 241 Query: 242 SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVT--SLGARLAMYEIGLNIF 299 + A + F + N+ N + D+N + SV S G RL +IG+ + Sbjct: 242 LLLFPAAAAFLVAMYFFVPSLHNKVNYMVRDVNQFVTGKSVNNYSDGNRLLSMKIGVEVG 301 Query: 300 IKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFL 359 ++ P+ + + MN + + + H + + + G++G + Sbjct: 302 MQHPWIGVGSGDVQQEMNAVYKKEYPDIDEHNWLIPHS--QFVYIFTALGIIGFVIFMIC 359 Query: 360 YFSLFYIAYKKRALGLLILTLGIVGIGLSD 389 F + + + + LS+ Sbjct: 360 LIYPFLNKEVSLDIFCMAVLVSTYTSYLSE 389 >UniRef50_C6LCR5 O-antigen polymerase family protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LCR5_9FIRM Length = 440 Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 83/250 (33%), Gaps = 22/250 (8%) Query: 176 TMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNK 235 +G + + K + + A + +T ++ +L+ A I Sbjct: 178 LASLGALLSFYFMTRKNKISVSYAIPFMAFIMTGFMTGSKNAILIIIFQLAAYWILISKS 237 Query: 236 SPKKFTSSIVLLIAILASIVIIFNKPIQN----RYNEALNDLNSYTNANSVTSLGARLAM 291 K F + V + + +I+ N+ + R LN S N + TS RL Sbjct: 238 WIKIFEIAFVAVGCVFIYWLIMNNQMLYQLVGIRVERMLNLFISGENVDGSTS--ERLYF 295 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 +F P + + + + + H +E S G+ Sbjct: 296 IRTAWQLFKAHPVFGIGMNNFSAYLASIGYSNPVYS----------HCGFLELLSTLGIP 345 Query: 352 GIFSTLFLYF----SLFYIAYKKRALGLL--ILTLGIVGIGLSDVIIWARSIPIIIISAI 405 G ++F L A K+ + + L L ++ +S + ++ ++ I ++ A Sbjct: 346 GFCVYYSMHFRIAAGLCRPALKRDKMAAVLLALCLRVLLFDVSTISMYTYNMYITLMIAY 405 Query: 406 VLLLVINNRN 415 +L +N Sbjct: 406 CFMLKKEEKN 415 >UniRef50_D1CAK4 O-antigen polymerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAK4_SPHTD Length = 480 Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 122/355 (34%), Gaps = 37/355 (10%) Query: 18 SMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLS 77 S++L I+ + + ++ + I + + L + ++ +LP + Sbjct: 55 SLVLAILLMSGLVDLLTPFRIGPLSAMGVTTILYAIGSWFVWLLRAELPARLRRALLPFA 114 Query: 78 IFLI--GLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 +FL G+ ++WY + N I F IV ++ + Sbjct: 115 LFLFWAGVSMVLWYRP----------SVEGVQNLLVIVAFLGLIVLTANETRRSPEFIDT 164 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 L + + + +IA ++ G + + VA+ + Sbjct: 165 LGRVMTAATVIAVVLQVLSYHLGV--------MPAGFGIQARSFALFALVALAWQLGRWR 216 Query: 196 ---FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILA 252 + A++ ++ ++ +R ++ ++ A+ +S + + + VL + + Sbjct: 217 SGDRRAFWAALAIVGLIGISLSRTAFVVGVLLFPAS--HMRLQSVRGWFQAGVLGVGAVG 274 Query: 253 SIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESR 312 + I ++ R DL+ ++ ++G R A +EI L + KSP + S Sbjct: 275 LLYTIVSRVEPLRARFFEGDLSLKVGGIAINAMG-RTAFWEITLASWRKSPLIGNGSGSA 333 Query: 313 AESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA 367 + H HN+ + GL+G+ L Y L ++ Sbjct: 334 QPLIEAYFP-----------GLGHPHNDYLRILHDYGLIGLAIWLVGYLVLLWVT 377 >UniRef50_D2U323 O-antigen ligase n=1 Tax=Arsenophonus nasoniae RepID=D2U323_9ENTR Length = 388 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 45/318 (14%), Positives = 100/318 (31%), Gaps = 13/318 (4%) Query: 52 IVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAK 111 + +++ R+ ++I L LS+ + L K N +A + Sbjct: 30 YFTAIIYLIKDRKRVFSIFKNNLFLSLVFFVIAMLYSLIISKDINISLKAINKGVIEKLF 89 Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATG 171 I IV + +K L L I YI+ H+ Sbjct: 90 ITSVAIAIVLYQEKKEHITKLLIFSLILSILPLAIKEILQYIDEYHQGILPLSAFEHRYI 149 Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 + + ++ + KN FLL+ + + T R T L +I + Sbjct: 150 SDWLIFILPALLSFWFYKGVKNKILFFLLSVT-FVAITIGTLQRGTWLSIAVIFFIWCVV 208 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 K K + +++ + +L+ + +I + Y + +S Sbjct: 209 --KKQIKLPSLAVIGIGVLLSYLAMINQGQFDKLF---------YKLGQTNSSHRYSNGT 257 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 + L + ++P + + + ++ HN ++ G+ Sbjct: 258 QDSALVLIKENPITGYGY-GEQLFYKIYNERVIDYPDWIFKQSIGPHNTVLSIWFAAGIF 316 Query: 352 GIFSTLFLYFSLFYIAYK 369 G+ + L+L+ S+F + Sbjct: 317 GLIAILYLFVSIFIHLFN 334 >UniRef50_B2RKC6 Putative uncharacterized protein n=2 Tax=Porphyromonas gingivalis RepID=B2RKC6_PORG3 Length = 471 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 68/209 (32%), Gaps = 25/209 (11%) Query: 176 TMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNK 235 + + + + + A+ +TQ+R +L P + + Sbjct: 253 AIFMAVAVRQYFYREQTVSTVEMIYGLVALSCFAFITQSRLAMLFIP-LSIMFFFLVRAF 311 Query: 236 SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIG 295 + + ++ IFN + +R+ D G R+ M +I Sbjct: 312 FLSQKKKLLFTSFMLIIVGGFIFNGLLSHRF---FAD-------------GERMQMRDIA 355 Query: 296 LNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFS 355 ++ + P + + + + L+ H HN+++ G G+ G+ Sbjct: 356 MDAINRHPLTGIRLGTMDNILQAQIDTDILLK--------HPHNQLLADGMQLGIPGMVV 407 Query: 356 TLFLYFSLFYIAYKKRALGLLILTLGIVG 384 + LFY AY+ R L+ I+ Sbjct: 408 LVVFVGGLFYFAYRDRRYDFLLFLPAILL 436 >UniRef50_C6PW82 O-antigen polymerase n=3 Tax=Clostridium RepID=C6PW82_9CLOT Length = 411 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 92/257 (35%), Gaps = 31/257 (12%) Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 A+ + + + + I K ++ L S ++ + LT +R I VA Sbjct: 170 GAFLVLALFPIIMLTIYEKNKIKKSIYSLISMIIVVDIVLTWSRNA-----FIGVAIGAI 224 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 I+ A+++ +F I +R D+ + + S R+ + Sbjct: 225 ILAIIFSWKLIFIIGPAAVIS----LFIPKISHRIL----DIANSSQNES------RIYL 270 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 ++ L + + P + + V ++ L+ F++ HN ++ S G++ Sbjct: 271 WKTALKMIKEHPILGVGNGNYVSLYDTYVKKYPELK-YPWFTHRPSHNSYLKVTSELGIL 329 Query: 352 GIFSTL-FLYFSLFYI----------AYKKRALGLLILTLGIVGIGLSDVIIWARSIPII 400 GI S + L FSL + Y+ G+ +G + +SD + + Sbjct: 330 GILSFVCMLVFSLLRVKQAASSAKDKLYRYFCTGIFASMVGFYFMNISDNLFFVPKTTAY 389 Query: 401 IISAIVLLLVINNRNNT 417 + + I R ++ Sbjct: 390 FWILLAISQAIVIRESS 406 >UniRef50_A4C652 Membrane protein of EXOQ family, involved in exopolysaccharide production n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C652_9GAMM Length = 498 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 90/278 (32%), Gaps = 19/278 (6%) Query: 98 PFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGY-AMYINSI 156 F ++Y + A + I G + L + ++ + +++ + + + Sbjct: 168 IFTFFRNNYKDEATLQILGRIFALILLLQGIIVLEQKFVGAIFTEQVIGKQINIVSLIGN 227 Query: 157 HENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN-HPFLFLLNSCAVLYVLALTQTR 215 E R++ + A L V+ + KK F ++ L T +R Sbjct: 228 QEVKRVAGSLSHPNNLAMFLNLFLPVACLLFFEEKKVAWRMFFGISIFLALLAELWTSSR 287 Query: 216 ATLLLFPIICVAALIAYYNK---SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALND 272 L I +K + K S +++ + A++++ ++ + R Sbjct: 288 GGWLALAFSGSICFILIMHKQGFNLIKVLLSFIMVSILAATVLLTASETFRTRIF----- 342 Query: 273 LNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEF 332 + R+ + ++ N+ + +P A M + + + Sbjct: 343 ------GEDYGTADLRVPLMQVAENMIVDNPVLGVGLNVYAARMQHYDNTNEYVS---RY 393 Query: 333 SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 +HN + + GL + L L + ++ + Sbjct: 394 YPFPVHNTYLLMAAESGLPSLILFLALIVYILWLGLRS 431 >UniRef50_D1YM01 O-antigen polymerase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YM01_9FIRM Length = 397 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 47/370 (12%), Positives = 115/370 (31%), Gaps = 17/370 (4%) Query: 29 CFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIW 88 S++I ++ + I+ + + R+ ++ I + +L + Sbjct: 15 ILISIMICMTRSSMAFGNLMYGLIILMTLITCWYRRHEISVPQSIRQYGWAYLVMLLCVL 74 Query: 89 YSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAG 148 SAF D+ Y + K+ I ++ + + +L + + + G Sbjct: 75 PSAFISDDILVTTKYFFNIWVWKVLIIVPILLCIKSSRKLYTILSVFFVYMGIDALSAFG 134 Query: 149 YAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYV 208 + ++ DR + + + + ++ K ++ L + L + Sbjct: 135 QYLAHYNLDFGDRAGGVINGSVMGLAMLLSFSFPLALIAMFDKSFPKYVRLSAIFSSLGI 194 Query: 209 L---ALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNR 265 L Q+R + L I V + Y + + ++ + + N+ R Sbjct: 195 LLGMWGNQSRGSWLFNGINGVLITLRYCFVNIRYIL--VLFVTVVGIGYAFTSNQSYMER 252 Query: 266 YNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNR 325 N + S R+ ++E + + P + Sbjct: 253 LESTFN-------ITTDGSNLGRIYVWEADKQMIMDHPVIGVGPGLWGKKYKEEYKLEKE 305 Query: 326 LRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGI 385 + H HN I++ S G++G+ L Y + K + L I+ Sbjct: 306 TQNL-----GHSHNNILQIASESGILGLIGFLGFSIFTIYKSVKNYIMSANPYDLSIIVG 360 Query: 386 GLSDVIIWAR 395 +S + ++ Sbjct: 361 FISYLFLFGS 370 >UniRef50_A2TSG4 TPR domain protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TSG4_9FLAO Length = 798 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 61/435 (14%), Positives = 144/435 (33%), Gaps = 49/435 (11%) Query: 21 LEIITYILCFFSMIIAFVD-NTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF 79 +++ + C S+I F + + + ++ LL LI + ++ + Sbjct: 13 FKLLIVLYCIISIIPRFEAIDPIGSQWFYF-GVINLLGLIFFYNNRTLGVLRTSSRVAFW 71 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFI-FGSFIVFLTLTSQLKSKKESVLYT 138 G+ + + + + A++ I + + + L Sbjct: 72 FFGIYLVFFVACLASIFGSL-NISEGVKDIARVGITLVGVFNLYLIFKVAPHRLFAFLVK 130 Query: 139 LYSLSFLIAGYAMYINSI-----------HENDRISFGVGTATGAAYSTMLIGIVSGVAI 187 ++ + G + + I + + FG T A S + I+SGV Sbjct: 131 TLHVTVFVVGIQIIFHFIDNWSVPRTGTLVKETELLFGSQNVTAAFLSITIPFIISGV-- 188 Query: 188 LYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKS-------PKKF 240 L + LL L R +L +I +I + + Sbjct: 189 LKHAGRWRVMSLLTLFVSFTALFYVGARTAVLSATVIFSLLIIYFIIDGVRSGALVQRLK 248 Query: 241 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSL--------------G 286 + ++ ++A +++ N +R YT ++ + G Sbjct: 249 YPLLPIIGILIAGFLLVTNSNRLDRSKANSYKNILYTKSSVQNATLAPAPVQAGLSKIAG 308 Query: 287 ARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGS 346 R Y++ ++ F +SP + A +++ + +HN+ ++ + Sbjct: 309 IRSLYYKMAMDDFKRSPLVGIGLGNWKLGNKD--AYYSQSNRDRFLYPLRVHNDFLQILA 366 Query: 347 LKGLMG----IFSTLFLYFSLFYIAYK----KRALGLLILTLGIVGIGLSDVIIWA-RSI 397 G++G + + L + + +K ++ L+L L ++ GL I + Sbjct: 367 EAGILGFIPYVLLFMMLSGGILLLFFKNQDSEKRWTFLVLALALIAYGLDASINFPLERT 426 Query: 398 PIIIISAIVLLLVIN 412 PI + AI+ L+I+ Sbjct: 427 PIQGLFAILAALIIS 441 >UniRef50_B1LZH5 Putative uncharacterized protein n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LZH5_METRJ Length = 545 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 102/323 (31%), Gaps = 24/323 (7%) Query: 68 NIKNLILPLSIFLIGLLDL--------IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFI 119 + ++ + GLL L +W+ ++ + S L+ + I I Sbjct: 131 DRPLVLTQFCFLVAGLLSLSNATDTAYLWFDTWRFAGLLLVSVAVSNLSESDIRTLALAI 190 Query: 120 VFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVG-TATGAAYSTML 178 L L + + V + LS L + N R + G+ Y Sbjct: 191 CALCLVQTAVAGLQYVSGSELGLSVLGEEQIVEENINFSAQRRAGGLKVHPNILGYYYEF 250 Query: 179 IGIVS-GVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP 237 + ++ +A+ + + L + LT +RA+ L FP+ ++ Y Sbjct: 251 VWPLALALALSRGPLLLRLAGAAGAASALVGVVLTLSRASWLTFPVSAALLILLVYRDRL 310 Query: 238 KKFTSSIV--LLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIG 295 TS IV LL + A + I R + S R + Sbjct: 311 FSRTSLIVFGLLAIVGAVAALYAGPLIWERLTA-----------DDGGSAAQRGPLNAAA 359 Query: 296 LNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVH-LHNEIIEAGSLKGLMGIF 354 L +F + P + +L L + H +HN I + G++G Sbjct: 360 LALFEQFPIFGVGLNNFGNQFAVLDRTGLSRLAGLFDRSNHVVHNLHILILTEVGIVGYA 419 Query: 355 STLFLYFSLFYIAYKKRALGLLI 377 + L ++ + ++ + Sbjct: 420 AFLLVFGTGIVRGFRAARRAPVG 442 >UniRef50_B4RUZ9 Secreted polysaccharide polymerase n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RUZ9_ALTMD Length = 385 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 78/245 (31%), Gaps = 18/245 (7%) Query: 140 YSLSFLIAGYAMYINSIHENDRIS----FGVGTATGAAYSTMLIGIVSGVAILYTKK-NH 194 Y + + ++ + DR+ A G A + +++ ++ Sbjct: 85 YLFGAWFSSFIVFQTGRNAGDRVEGVGTVDAPEANGLAAALAPAIVINLYYFWVSRTIKE 144 Query: 195 PFLFLLNSCAVLYVLALTQTRATLLLFPI----ICVAALIAYYNKSPKKFTSSIVLLIAI 250 F + + L +RA+ L I + + + +K T + + ++ + Sbjct: 145 KAFFAIAGVFTANAIVLINSRASFLAVAISVSYFMWKLFFSSFQRPRQKATVAWIAILGL 204 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 + I+ I R ++ + T RL + + + P A Sbjct: 205 CGAAYIVDYGFI-ERMKTIKSEEKTAQKETGKT----RLTFWSAAVEVSKDHPL-GLGAR 258 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 ++ V + N +H+ +E + +G G +FL S ++ K Sbjct: 259 GFDAVSHVYV---PSNVDTGQSRNRSVHSTWLEVLTEQGYTGFILFIFLLSSAYFTLRKI 315 Query: 371 RALGL 375 R + Sbjct: 316 RKSLI 320 >UniRef50_A8SMC4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMC4_9FIRM Length = 401 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 101/263 (38%), Gaps = 34/263 (12%) Query: 156 IHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL-NSCAVLYVLALTQT 214 R A I I++ L K + L+ L S VL LT+ Sbjct: 160 YMALHRPISSFFNTNYYATICEFIIIIAMYYFLSNKNRNNRLYFLCVSTLAFIVLFLTEN 219 Query: 215 RATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLN 274 R L P I +A L+ + K+ K + + + I+ I++IF+ I RY N Sbjct: 220 RTAL---PTILIATLVLSFTKN-NKKVFTFLGIFTIVIVILMIFSNRIFPRYEFIGN--- 272 Query: 275 SYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSN 334 SLG R ++E + +F K+ + + + + Sbjct: 273 ---------SLGTRKEIWENAIKLFKKTFLFGSGPMAYQNASWVSHPAN----------- 312 Query: 335 VHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY--IAYKKRALG--LLILTLGIVGIGLSDV 390 H HN +++ G++G L+ +F + +KR L ++ LT+ ++ G+ DV Sbjct: 313 -HAHNIVLDLLINFGIVGNIIIFPLFIGIFKKVYSIRKRNLFRLIIALTVVVILHGMLDV 371 Query: 391 -IIWARSIPIIIISAIVLLLVIN 412 I+W ++ I + + V N Sbjct: 372 TILWHQTAYIYFSVLLAVGKVSN 394 >UniRef50_C6MKH1 O-antigen polymerase n=1 Tax=Geobacter sp. M18 RepID=C6MKH1_9DELT Length = 435 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 101/275 (36%), Gaps = 27/275 (9%) Query: 113 FIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYA--MYINSIHENDRISFGVGTAT 170 ++F ++ LT++ + + Y L ++ G+ M +S G Sbjct: 112 WVFVVLLITRVLTTKTRMLLFLITYFLVNIKMAQHGFLSWMSRGFSFTGWGVSGSPGWFQ 171 Query: 171 GAAYSTMLIGIVSGVAI--------LYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFP 222 + +M +G+ +A+ + + L+++ A + + +R ++ Sbjct: 172 NSGEFSMEMGVFLPLALSYIVAFRHTWPRPLKIALYIIVVMA-IGSIMACNSRGGIV--- 227 Query: 223 IICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSV 282 + A+ + ++ + + L A+ + + R+ A D Sbjct: 228 --GLVAVGLWGLMYSRERVKAFICLAAVAYIVYTFLPTQFKARFETAGED---------R 276 Query: 283 TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEII 342 TS+ +R+A + G+ ++P + ++ + E L + + V +HN + Sbjct: 277 TSV-SRIAYWNCGVQAVKENPLTGVGFKNWGPWASDNHPEIIGLNSSDKQIEV-IHNTYL 334 Query: 343 EAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLI 377 EA + G +G+ L L +F + + + L Sbjct: 335 EAATELGGIGMLVYLALQLQIFVLNRRNAKMASLA 369 >UniRef50_C9KUN2 O-antigen polymerase family protein n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KUN2_9BACE Length = 538 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 112/354 (31%), Gaps = 39/354 (11%) Query: 69 IKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQL 128 + + L + + + Y S F + Y ++I +I+F+ + ++ Sbjct: 28 KRKIRLSVDFLFLSFTVFMGYVFVY---SLFTSQY-----IHSVYIVSGWILFVLMRNR- 78 Query: 129 KSKKESVLYTLYSLSFLIAGYAMYI-NSIHENDRISFGVGTATGAAYSTMLIGIVSGVAI 187 K+ E+ L + L A Y + E G+ A I + + Sbjct: 79 KNPTETFNSILAVVGVLSALYGLLQYTGYIETQSYFPVTGSFDNPAGFAASIVLCYPFLL 138 Query: 188 LYTKKNHPFLFLLNSCAVLYVL-ALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 + +F L +C +L ++ L+ +R +L ++ + Y K K ++ Sbjct: 139 CHPSNGKRRMFKLMACLLLIIVVILSGSRTGVLTLCVVTLLFYALRYRKLIHKRRIFLIS 198 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 A+ + I ++ S R+ ++++ + + Sbjct: 199 GGALFLISLFIGLIYLKP------------------ASASGRVLIWKVSAGLCKEHIIQG 240 Query: 307 RSAESRAESMNLLVAEHNRLRGA------LEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 S A++ A L + H NE + +GL+GI L Sbjct: 241 NGLGSFKADYMPEQAKYLSSSHADESDRILAGNTNHPFNEYLLLLIEQGLIGIVLFLLSL 300 Query: 361 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 ++F + L +V I + + + I L +N R Sbjct: 301 IAVF----RSNVAFDTPAILTLVSIAIFSCFSYPFKYAFVWFMIIYCLASLNQR 350 >UniRef50_B4B3W0 O-antigen polymerase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B3W0_9CHRO Length = 851 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 79/224 (35%), Gaps = 15/224 (6%) Query: 171 GAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLL--LFPIICVAA 228 A Y + I ++ ++IL T K +L+ L L T ++ L + Sbjct: 191 VAGYLLLAIPLLVSLSILETSKK-RWLWFSGVGLGLLDLYTTSSKGGWLGLAALFVFAVV 249 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGAR 288 ++ + P+ + + I+ ++ + N + + ++ + L R Sbjct: 250 VLLLKSNLPRLWLGIGSFIAFIIILLLALTNNRLLLLIKQVIS-------GQTGGELAYR 302 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLK 348 L ++G + I+ PFS + L + LH+ ++ + Sbjct: 303 LINTDLGWRMGIEHPFSGIGLGNVPLLYQKYRPIWAGRESELAYQ---LHSTPVQLWAEL 359 Query: 349 GLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVII 392 G+ GIF L L Y ++ L T I GLS ++ Sbjct: 360 GIWGIFPLLEAVILLTYALFRYATP--LEKTDQIFIWGLSGALL 401 >UniRef50_B0THF5 O-antigen polymerase family protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THF5_HELMI Length = 666 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 90/255 (35%), Gaps = 34/255 (13%) Query: 129 KSKKESVLYTLYSLSFLIAGYAMYI----NSIHENDRISFGVGTATGAAYST-------- 176 + +L + IA + +Y + EN +G+ T A+S Sbjct: 364 PRQAALLLILFTLVGTAIAAFGVYQFIVKAPMPENWVDQAELGSITTRAFSIVGSPNILG 423 Query: 177 --MLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLAL-TQTRATLLLFPIICVAALIAYY 233 +++ + + Y K LF L A++ L + +R L + I Sbjct: 424 SLLVLTTPIALGLAYRGKTIQRLFYLACAALMGASMLFSFSRGAWLAIAAAIILFGILQD 483 Query: 234 NKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYE 293 + ++ L+ I A ++ I + +R + L+ ++ RL ++ Sbjct: 484 RR--------LIALLIIGAILLPIASPAAADRVSYLLS-----PEYFKKSAQDGRLERWD 530 Query: 294 IGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGI 353 + L + P + + E+ R +++ N ++ + GL+G+ Sbjct: 531 LALEKVAQRPLTGIGLGRYGGAAAENNKEYLPHR--TLYTD----NYYMKTAAETGLLGL 584 Query: 354 FSTLFLYFSLFYIAY 368 F+ + L S+ A+ Sbjct: 585 FAFIALMVSVLRTAF 599 >UniRef50_C6C6R7 O-antigen polymerase n=1 Tax=Dickeya dadantii Ech703 RepID=C6C6R7_DICDC Length = 400 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 93/264 (35%), Gaps = 31/264 (11%) Query: 97 SPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSI 156 S + S + A+ +FG I + +K +++ + + Y + + Sbjct: 79 SYYHTDIRSLTDVARYILFGWLIY---RANFSAQQKLGLVFWAVMGTVVGLIYGAWDHYY 135 Query: 157 HENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH-------PFLFLLNSCAVLYVL 209 ++ + + + + ++ + I+ G+A+ + L+L L + Sbjct: 136 LDHGQF-WTLNSVGHVNHAAIYNAIICGMALTTLFSHWTSFSAGRRLLWLAMLALCLVYV 194 Query: 210 ALTQTRATLLLFP-IICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNE 268 A ++RAT ++ L + ++ ++ I +I+ ++ N+ Sbjct: 195 AFGESRATFGAILAVVLFLGLGFARKSKKFLWVPTLFIVGMIGVAILSNARVVVKQEQND 254 Query: 269 ALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG 328 N++ SY + ++ + F + P E+ + + +G Sbjct: 255 LENNMLSYRDT-----------IWRSAFDTFREHPLFGVGKENF-------IEVGIKWQG 296 Query: 329 ALEFSNV-HLHNEIIEAGSLKGLM 351 + F +V H HN + + G+ Sbjct: 297 EVMFPHVSHAHNIFMNVLAENGIW 320 >UniRef50_C8WZW4 O-antigen polymerase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZW4_DESRD Length = 415 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 72/196 (36%), Gaps = 11/196 (5%) Query: 195 PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASI 254 F L A ++L T +R + ++A I Y+ + ++ ++ + Sbjct: 183 KFFHFLAFLASAFMLIKTTSRG---VIGGCALSASIYYFYHAKLNSKHILIFILIAFSFS 239 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 +I+F P R + + ++T SL R ++ F+ PFS E+ Sbjct: 240 IILFKTPQGIRTKNEI--IQTFTATEKDKSLRMRFFLWYASFKSFLDKPFSGNGFENFRN 297 Query: 315 SMNLLVAEHNRLR------GALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY 368 + + + ++ S+ + HN + G+ G + + S+ + + Sbjct: 298 TYEKQYHIYKNNKKLQKKFPLVKSSDKNAHNFFLHFLLETGIFGTLAITLFFCSIIFYGF 357 Query: 369 KKRALGLLILTLGIVG 384 + ++ + L ++ Sbjct: 358 NRFSMTSIASALALIT 373 >UniRef50_Q2JJF2 O-antigen polymerase family protein n=2 Tax=Synechococcus RepID=Q2JJF2_SYNJB Length = 433 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 84/265 (31%), Gaps = 20/265 (7%) Query: 151 MYINSIHENDRISFGVGTATGAA-YSTMLIGIVSGVAILYTKKNHP--FLFLLNSCAVLY 207 ++I + +R + + A Y + + + +G+ + ++ P Sbjct: 157 VWITGVAGGERPAAAFTSPNILAIYLVIHLCLAAGLWLDRADRDWPQAVGLGAVLGLGSL 216 Query: 208 VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYN 267 +L LT +R + + + L + L + A+ + + R Sbjct: 217 LLLLTASRNGWGVGGLALMMGLALRRCW-WGIGILVGIGLAGLAAAWDWPGWRAVVPRLI 275 Query: 268 EALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLR 327 + A +S RL + L + + P + +S A N Sbjct: 276 WSRLADTFDPQALHFSSTANRLDAWHFALQMARERPLTGWGWQSFAALYNAQEPPELL-- 333 Query: 328 GALEFSNVHLHNEIIEAGSLKGLM---GIFSTLFLYFSLFYIAYKKRA----LGLLILTL 380 H HN + + G+ G + + A+++ LG+L+ Sbjct: 334 -------GHCHNLYLHLAAEGGIPLLLGHLILWGWILARGWHAWRRSQESVLLGMLLALT 386 Query: 381 GIVGIGLSDVIIWARSIPIIIISAI 405 GL DV++ I +++ + Sbjct: 387 AFFASGLLDVVMLDGRIHLLVTLLL 411 >UniRef50_C4TSW9 O-antigen biosynthesis protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TSW9_YERKR Length = 415 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 39/315 (12%), Positives = 97/315 (30%), Gaps = 35/315 (11%) Query: 111 KIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTAT 170 K F++ + + + K + + + L+ A+ + T Sbjct: 99 KKFLYILPLALFFINQPQRVKLFCIGFLAANAVVLVGTLAV---GVLHIPIGHIDPANPT 155 Query: 171 GAAYSTMLIGIVSGVAILYTKKNHP-------FLFLLNSCAVLYVLALTQTRATLLLFPI 223 ++ IL+ LL A VL L R + + Sbjct: 156 LFKLQITQNFFLALSTILWLMLAFKSQGWKRWGYGLLVVAACYSVLFLVLGRTGYVALVV 215 Query: 224 ICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLN---SYTNAN 280 L + + + ++ IA +A ++I R + ++++ + N Sbjct: 216 GLGVWLFFSLGRRQR-WLLVVLGAIAFVAVLLIPNKAT--QRITQGIDEIKVCMAAPAGN 272 Query: 281 S----VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVH 336 TS+G R + + ++P A + + + Sbjct: 273 VTGACRTSMGQRSEFAIEAVRLIKEAPILGHGAGGFYYEDPKI-----------NYKINN 321 Query: 337 LHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK----RALGLLILTLGIVGIGLSDVII 392 HN+ + G++G+ L + + +++ R + L +LT + + ++ Sbjct: 322 PHNQYLLETIQSGVVGLIIFLAWIVCCYRVIWQQIPALRNVLLAVLTSYMACNFFNSFLL 381 Query: 393 WARSIPIIIISAIVL 407 + + +I +L Sbjct: 382 DSSEGHLFMIFVAIL 396 >UniRef50_C0QCL9 RfaL n=2 Tax=Deltaproteobacteria RepID=C0QCL9_DESAH Length = 442 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 45/350 (12%), Positives = 120/350 (34%), Gaps = 36/350 (10%) Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 L + + ++ L + + H + K+ +F +FL K + Sbjct: 87 LLLLFLCVIWLSSIFGVSTVDR-YSTVDHPTVKFTKVVVF----IFLMTHIITDKNKFNG 141 Query: 136 LYTLYSLSFLIAGYAMYI----NSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTK 191 L+ ++ + L+ G + + I G A + + + ++ + + + Sbjct: 142 LFWVFVMCALVLGLQAWELPRRSFIAGRLEGIGGADFAESNFFGSFMAAMLPLIGVQLLR 201 Query: 192 KNH---PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI 248 + L+ + + L ++R L+ + C AA++ + K + L+ Sbjct: 202 SKKWILKIVCLVAAAFTANAVVLCRSRGALVGIAMGCFAAMLMAPKQYKK---KIAIGLV 258 Query: 249 AILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRS 308 + + + ++ R + S +R +++ G + P Sbjct: 259 LGVLGGLYVTDQQFLERMTS----IVVSEEEERDESAASRFRLWQAGAQMVSDHPL-GIG 313 Query: 309 AESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY 368 + +++ + + E+ HN ++ + G+ G+F + F Sbjct: 314 IGNWYQTIVIYI---------PEYEGKDSHNTYVKCVAELGIQGLFLFALIIFFALKENS 364 Query: 369 KKRALGLLILT-----LGIVGIGL--SDVIIWARSIPIIIISAIVLLLVI 411 + +A+ + I+ GL S VII + I +I ++ +++ Sbjct: 365 RIKAMSDRLPPEIANDFIILSFGLCISIVIILTCGLTITMIYTEIIWILL 414 >UniRef50_Q3J9S9 O-antigen polymerase n=2 Tax=Nitrosococcus oceani RepID=Q3J9S9_NITOC Length = 468 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 93/305 (30%), Gaps = 21/305 (6%) Query: 74 LPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTL-TSQLKSKK 132 L L + L G + + A+ D + + AKIF+ L ++ Sbjct: 78 LRLLLVLFGYMTFTTFFAWAPDA-----AWQQWDKVAKIFLMSYVTTILIYGKQRIYWLL 132 Query: 133 ESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKK 192 +L F + + M++G+ + + Sbjct: 133 LVATLSLGFYGFKGGLFTILTGGQFHVMGPPKSFLAGNNFLGLAMVMGLPLLLVFAQQEA 192 Query: 193 NHPFLFLL--NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 F LL + T +R +L ++ V + + NK I+L+ + Sbjct: 193 RVWFRRLLYATFALTFIAVPFTYSRGAMLGLAVVSVLLFMRWRNK----ALLVIMLIPIL 248 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 + + + N S N S R+A +++ NI I P E Sbjct: 249 FGGLAFVP--------EKLFNRAESIQNYEMDASSMQRIAAWDLAWNIAIDRPLRGGGFE 300 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 ++ + +E ++V H+ + G +G+ + + F + + Sbjct: 301 YEGDTARWHTYLDPKYYYVMEGAHV-AHSIYFQMLGQHGFVGLSLFMIILFLTYRRLGRL 359 Query: 371 RALGL 375 + L Sbjct: 360 KKWTL 364 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P27243 O-antigen ligase n=5 Tax=Escherichia coli RepID=... 214 7e-54 UniRef50_Q4QTN0 WaaL n=1 Tax=Klebsiella pneumoniae RepID=Q4QTN0_... 185 3e-45 UniRef50_A8ARL1 Putative uncharacterized protein n=2 Tax=Citroba... 180 1e-43 UniRef50_D0KD48 O-antigen polymerase n=3 Tax=Pectobacterium RepI... 179 2e-43 UniRef50_Q9ZIT0 Lipid A-core:surface polymer ligase WaaL n=26 Ta... 178 4e-43 UniRef50_Q0K7R4 Membrane spanning protein involved in lipopolysa... 167 6e-40 UniRef50_Q9ZIS3 Lipid A-core:surface polymer ligase WaaL n=3 Tax... 162 3e-38 UniRef50_B2VF67 Lipid A core, surface polymer ligase WaaL n=5 Ta... 161 5e-38 UniRef50_Q6DAU1 O-antigen ligase n=1 Tax=Pectobacterium atrosept... 160 7e-38 UniRef50_C9KNY6 Inorganic carbon transporter n=2 Tax=Veillonella... 159 2e-37 UniRef50_D0KD50 O-antigen polymerase n=1 Tax=Pectobacterium wasa... 159 2e-37 UniRef50_B5SFB1 Lipopolysaccharide o-antigen ligase protein n=4 ... 151 5e-35 UniRef50_B6XJV7 Putative uncharacterized protein n=1 Tax=Provide... 145 4e-33 UniRef50_C6P739 O-antigen polymerase n=1 Tax=Sideroxydans lithot... 142 2e-32 UniRef50_B2U905 O-antigen polymerase n=2 Tax=Ralstonia pickettii... 133 8e-30 UniRef50_C5V1T7 O-antigen polymerase n=1 Tax=Gallionella ferrugi... 132 2e-29 UniRef50_B7X132 O-antigen polymerase n=1 Tax=Comamonas testoster... 131 5e-29 UniRef50_A5KZV1 Putative O-antigen ligase n=1 Tax=Vibrionales ba... 131 6e-29 UniRef50_Q1YWB6 Putative O-antigen ligase n=2 Tax=Photobacterium... 129 2e-28 UniRef50_D1T571 O-antigen polymerase n=3 Tax=Burkholderia RepID=... 128 3e-28 UniRef50_B2SL57 O-Antigen Polymerase family n=11 Tax=Xanthomonad... 128 4e-28 UniRef50_A1WKR6 O-antigen polymerase n=1 Tax=Verminephrobacter e... 128 5e-28 UniRef50_Q65W10 RfaL protein n=2 Tax=Pasteurellaceae RepID=Q65W1... 128 5e-28 UniRef50_C4KCH4 O-antigen polymerase n=1 Tax=Thauera sp. MZ1T Re... 127 6e-28 UniRef50_Q1LJU1 O-antigen polymerase n=1 Tax=Cupriavidus metalli... 127 7e-28 UniRef50_D0Z1E7 O-antigen ligase n=1 Tax=Photobacterium damselae... 127 7e-28 UniRef50_C9P0H7 O-antigen ligase n=1 Tax=Vibrio coralliilyticus ... 127 9e-28 UniRef50_A0KQV1 O-antigen polymerase n=5 Tax=Aeromonas RepID=A0K... 125 2e-27 UniRef50_B2KDP4 O-antigen polymerase n=1 Tax=Elusimicrobium minu... 123 8e-27 UniRef50_A6VLR5 O-antigen polymerase n=1 Tax=Actinobacillus succ... 123 1e-26 UniRef50_A9IRJ0 Membrane protein resembling polysaccharide polym... 122 3e-26 UniRef50_D0IMS5 O-antigen ligase n=11 Tax=Vibrio RepID=D0IMS5_9VIBR 122 3e-26 UniRef50_Q2YBZ5 O-antigen polymerase n=2 Tax=Nitrosospira multif... 120 9e-26 UniRef50_C8SG72 O-antigen polymerase n=1 Tax=Mesorhizobium oppor... 120 9e-26 UniRef50_B8K678 Putative O-antigen ligase n=1 Tax=Vibrio parahae... 120 1e-25 UniRef50_B4AYT6 O-antigen polymerase n=1 Tax=Cyanothece sp. PCC ... 119 2e-25 UniRef50_B5JVL1 O-Antigen Polymerase family n=1 Tax=gamma proteo... 119 2e-25 UniRef50_Q1ZLP1 RfaL protein n=2 Tax=Photobacterium RepID=Q1ZLP1... 119 2e-25 UniRef50_B5YEZ0 Tetratricopeptide repeat domain protein n=1 Tax=... 118 3e-25 UniRef50_Q1PVJ3 Putative uncharacterized protein n=1 Tax=Candida... 118 4e-25 UniRef50_Q9CJX6 Putative uncharacterized protein n=1 Tax=Pasteur... 118 4e-25 UniRef50_A6FBF0 Putative O-antigen ligase n=1 Tax=Moritella sp. ... 117 7e-25 UniRef50_D2EQE8 Putative licD2 protein n=1 Tax=Streptococcus sp.... 117 8e-25 UniRef50_B9MAP4 O-antigen polymerase n=2 Tax=Comamonadaceae RepI... 117 9e-25 UniRef50_B7VTJ0 Putative O-antigen ligase n=2 Tax=Vibrio RepID=B... 117 1e-24 UniRef50_UPI0001BCF229 O-antigen polymerase n=1 Tax=Selenomonas ... 116 2e-24 UniRef50_C9P8T9 RfaL protein n=1 Tax=Vibrio metschnikovii CIP 69... 116 2e-24 UniRef50_Q7NZV1 Probable O-antigen ligase; lipopolysaccharide co... 115 2e-24 UniRef50_C4L785 O-antigen polymerase n=1 Tax=Tolumonas auensis D... 115 2e-24 UniRef50_Q474P4 O-antigen polymerase n=1 Tax=Ralstonia eutropha ... 115 2e-24 UniRef50_A1W2G4 O-antigen polymerase n=3 Tax=Acidovorax RepID=A1... 115 2e-24 UniRef50_A7AIE4 Putative uncharacterized protein n=5 Tax=Bactero... 115 3e-24 UniRef50_UPI000197B9DC hypothetical protein BACCOPRO_00097 n=1 T... 115 4e-24 UniRef50_A5FG38 O-antigen polymerase n=1 Tax=Flavobacterium john... 114 5e-24 UniRef50_B6A4C0 O-antigen polymerase n=11 Tax=Rhizobium RepID=B6... 114 5e-24 UniRef50_A6LHH5 Putative membrane protein n=3 Tax=Bacteroidales ... 114 6e-24 UniRef50_A3N1D5 Putative uncharacterized protein n=6 Tax=Actinob... 114 6e-24 UniRef50_C6HYN6 O-antigen polymerase n=1 Tax=Leptospirillum ferr... 113 1e-23 UniRef50_A9IHC6 LPS ligase-like protein n=1 Tax=Bordetella petri... 113 1e-23 UniRef50_C9LXH7 Putative O-antigen polymerase n=1 Tax=Selenomona... 113 1e-23 UniRef50_A6LK62 O-antigen polymerase n=1 Tax=Thermosipho melanes... 113 1e-23 UniRef50_D0IC13 O-antigen ligase n=1 Tax=Grimontia hollisae CIP ... 113 1e-23 UniRef50_C1SIP4 Lipid A core-O-antigen ligase-like enyme n=1 Tax... 113 1e-23 UniRef50_A7HKE5 O-antigen polymerase n=1 Tax=Fervidobacterium no... 113 1e-23 UniRef50_B0C275 O-Antigen polymerase, putative n=1 Tax=Acaryochl... 113 1e-23 UniRef50_Q985Q6 Mll7573 protein n=1 Tax=Mesorhizobium loti RepID... 113 2e-23 UniRef50_C3NSX8 O-antigen ligase n=24 Tax=Vibrio RepID=C3NSX8_VIBCJ 112 2e-23 UniRef50_C5NWF6 Licd protein n=1 Tax=Gemella haemolysans ATCC 10... 112 3e-23 UniRef50_B5YD26 Heptosyltransferase family n=2 Tax=Dictyoglomus ... 112 3e-23 UniRef50_Q1NRK6 O-antigen polymerase n=2 Tax=delta proteobacteri... 112 4e-23 UniRef50_A7BYU7 O-antigen polymerase n=1 Tax=Beggiatoa sp. PS Re... 111 4e-23 UniRef50_C9Y384 Putative uncharacterized protein n=1 Tax=Cronoba... 111 5e-23 UniRef50_B9XBG9 O-antigen polymerase n=1 Tax=bacterium Ellin514 ... 110 7e-23 UniRef50_A1SRT4 O-antigen polymerase n=1 Tax=Psychromonas ingrah... 110 8e-23 UniRef50_P44067 Uncharacterized protein HI0874 n=5 Tax=Pasteurel... 110 8e-23 UniRef50_Q1Q4N8 Similar to lipid A core O-antigen ligase related... 110 8e-23 UniRef50_A8T0D4 Putative O-antigen ligase n=1 Tax=Vibrio sp. AND... 110 8e-23 UniRef50_C2HRF0 O-antigen ligase n=1 Tax=Vibrio cholerae bv. alb... 110 1e-22 UniRef50_Q2L1I7 Putative O-antigen polymerase n=1 Tax=Bordetella... 110 1e-22 UniRef50_C8N937 Putative uncharacterized protein n=1 Tax=Cardiob... 110 1e-22 UniRef50_A9BR10 O-antigen polymerase n=1 Tax=Delftia acidovorans... 109 2e-22 UniRef50_A1HMD6 O-antigen polymerase n=1 Tax=Thermosinus carboxy... 109 2e-22 UniRef50_A2TSG4 TPR domain protein n=1 Tax=Dokdonia donghaensis ... 108 3e-22 UniRef50_B3ELM8 O-antigen polymerase n=1 Tax=Chlorobium phaeobac... 108 5e-22 UniRef50_A8F5A6 O-antigen polymerase n=1 Tax=Thermotoga lettinga... 107 6e-22 UniRef50_Q01Z28 O-antigen polymerase n=1 Tax=Candidatus Solibact... 107 6e-22 UniRef50_A1SRW5 O-antigen polymerase n=1 Tax=Psychromonas ingrah... 107 7e-22 UniRef50_A9B578 O-antigen polymerase n=1 Tax=Herpetosiphon auran... 107 8e-22 UniRef50_B6EPB7 O-antigen ligase WaaL n=1 Tax=Aliivibrio salmoni... 107 8e-22 UniRef50_Q4KJB3 O-antigen polymerase family protein/toluene tole... 107 9e-22 UniRef50_D2RIJ5 O-antigen polymerase n=1 Tax=Acidaminococcus fer... 107 1e-21 UniRef50_Q1ZGS6 Putative O-antigen ligase n=1 Tax=Psychromonas s... 106 1e-21 UniRef50_C6DZV8 O-antigen polymerase n=1 Tax=Geobacter sp. M21 R... 106 2e-21 UniRef50_A1AXG4 O-antigen polymerase n=1 Tax=Candidatus Ruthia m... 105 2e-21 UniRef50_Q12AK2 O-antigen polymerase n=1 Tax=Polaromonas sp. JS6... 105 3e-21 UniRef50_C9R1T3 RfaL protein n=1 Tax=Aggregatibacter actinomycet... 105 3e-21 UniRef50_C2FRP7 O-antigen polymerase n=2 Tax=Sphingobacterium sp... 105 4e-21 UniRef50_C6MBK9 O-antigen polymerase n=1 Tax=Nitrosomonas sp. AL... 105 4e-21 UniRef50_UPI00016A36CB O-antigen polymerase n=1 Tax=Burkholderia... 105 4e-21 UniRef50_A6C2I1 Putative uncharacterized protein n=1 Tax=Plancto... 105 4e-21 UniRef50_A3ERX2 O-antigen polymerase n=2 Tax=Leptospirillum sp. ... 105 5e-21 UniRef50_D1YM01 O-antigen polymerase n=1 Tax=Veillonella parvula... 104 6e-21 UniRef50_C4V160 O-antigen polymerase n=1 Tax=Selenomonas fluegge... 104 6e-21 UniRef50_Q0AIV7 O-antigen polymerase n=2 Tax=Nitrosomonas RepID=... 104 6e-21 UniRef50_A5EUW2 O-antigen ligase n=1 Tax=Dichelobacter nodosus V... 104 7e-21 UniRef50_B7J3X6 O-antigen polymerase family protein n=2 Tax=Acid... 104 7e-21 UniRef50_B8GCP3 O-antigen polymerase n=3 Tax=Chloroflexus RepID=... 104 8e-21 UniRef50_A9CZZ0 RfaL protein n=1 Tax=Hoeflea phototrophica DFL-4... 103 9e-21 UniRef50_P73958 Slr1515 protein n=1 Tax=Synechocystis sp. PCC 68... 103 9e-21 UniRef50_Q0FYD9 Putative uncharacterized protein n=1 Tax=Fulvima... 103 9e-21 UniRef50_C9PJM0 O-antigen ligase n=1 Tax=Vibrio furnissii CIP 10... 103 1e-20 UniRef50_A7JUL1 Possible O-antigen ligase n=12 Tax=Pasteurellace... 103 2e-20 UniRef50_B2IAL7 O-antigen polymerase n=7 Tax=Xylella fastidiosa ... 103 2e-20 UniRef50_A6SUC2 Uncharacterized conserved protein n=1 Tax=Janthi... 102 2e-20 UniRef50_A9AZ26 O-antigen polymerase n=1 Tax=Herpetosiphon auran... 102 2e-20 UniRef50_C4TSW9 O-antigen biosynthesis protein n=1 Tax=Yersinia ... 102 2e-20 UniRef50_A3UQU5 RfaL protein n=1 Tax=Vibrio splendidus 12B01 Rep... 102 2e-20 UniRef50_B5YIP3 O-Antigen Polymerase family n=1 Tax=Thermodesulf... 102 3e-20 UniRef50_Q3B1X3 Putative uncharacterized protein n=1 Tax=Chlorob... 102 3e-20 UniRef50_Q9ZM38 Putative n=15 Tax=Helicobacter RepID=Q9ZM38_HELPJ 102 3e-20 UniRef50_C8Q870 Putative uncharacterized protein n=1 Tax=Pantoea... 102 4e-20 UniRef50_B8F9U4 O-antigen polymerase n=1 Tax=Desulfatibacillum a... 101 4e-20 UniRef50_C6MZJ1 O-antigen biosynthesis protein n=2 Tax=Legionell... 101 5e-20 UniRef50_B2JE45 O-antigen polymerase n=2 Tax=Burkholderia RepID=... 101 6e-20 UniRef50_C6BCQ9 O-antigen polymerase n=1 Tax=Ralstonia pickettii... 100 7e-20 UniRef50_C5T763 O-antigen polymerase n=1 Tax=Acidovorax delafiel... 100 9e-20 UniRef50_Q1N5A2 Putative uncharacterized protein n=1 Tax=Bermane... 100 1e-19 UniRef50_C9KUN2 O-antigen polymerase family protein n=1 Tax=Bact... 100 1e-19 UniRef50_C0WB04 Predicted protein n=1 Tax=Acidaminococcus sp. D2... 100 1e-19 UniRef50_B9BDB2 Putative membrane protein n=3 Tax=Burkholderia m... 100 1e-19 UniRef50_Q6AN94 Hypothetical membrane protein n=1 Tax=Desulfotal... 100 2e-19 UniRef50_C9LPH8 O-antigen polymerase family protein n=1 Tax=Dial... 100 2e-19 UniRef50_B5LBK8 Putative phosphotransferase LicD4 n=1 Tax=Strept... 100 2e-19 UniRef50_B8E0S1 TPR repeat-containing protein n=1 Tax=Dictyoglom... 99 2e-19 UniRef50_A7GHW6 Exopolysaccharide biosynthesis family protein n=... 99 2e-19 UniRef50_B4SKH3 O-antigen polymerase n=2 Tax=Stenotrophomonas ma... 99 2e-19 UniRef50_C4V4R3 O-antigen polymerase n=1 Tax=Selenomonas fluegge... 99 2e-19 UniRef50_C6PW82 O-antigen polymerase n=3 Tax=Clostridium RepID=C... 99 3e-19 UniRef50_A0YU97 O-antigen polymerase n=3 Tax=Cyanobacteria RepID... 99 3e-19 UniRef50_Q8A281 Putative uncharacterized protein n=2 Tax=Bactero... 99 3e-19 UniRef50_Q5ZXB0 O-antigen biosynthesis protein n=4 Tax=Legionell... 99 3e-19 UniRef50_C0QH03 O-antigen polymerase involved in exopolysacchari... 99 4e-19 UniRef50_D1B406 O-antigen polymerase n=1 Tax=Sulfurospirillum de... 98 5e-19 UniRef50_Q1ZHF3 Putative uncharacterized protein n=1 Tax=Psychro... 98 5e-19 UniRef50_Q8F4F2 Putative uncharacterized protein n=1 Tax=Leptosp... 98 6e-19 UniRef50_B4WP88 O-Antigen Polymerase family n=3 Tax=Cyanobacteri... 98 6e-19 UniRef50_A1HP47 O-antigen polymerase n=1 Tax=Thermosinus carboxy... 98 6e-19 UniRef50_A9KDI8 O-antigen ligase n=6 Tax=Coxiella burnetii RepID... 98 6e-19 UniRef50_C5CEM9 O-antigen polymerase n=1 Tax=Kosmotoga olearia T... 98 7e-19 UniRef50_Q6MMF8 Putative O-antigen ligase WaaL n=1 Tax=Bdellovib... 97 9e-19 UniRef50_A4WU00 O-antigen polymerase n=4 Tax=Rhodobacter sphaero... 97 1e-18 UniRef50_A4G2D6 Putative uncharacterized protein n=1 Tax=Hermini... 97 1e-18 UniRef50_A9A0F8 O-antigen polymerase n=1 Tax=Desulfococcus oleov... 97 1e-18 UniRef50_B2KDP3 O-antigen polymerase n=1 Tax=Elusimicrobium minu... 97 2e-18 UniRef50_C7I561 O-antigen polymerase n=1 Tax=Thiomonas intermedi... 97 2e-18 UniRef50_B1ZQU0 O-antigen polymerase n=1 Tax=Opitutus terrae PB9... 97 2e-18 UniRef50_A4BIW8 RfaL protein n=1 Tax=Reinekea blandensis MED297 ... 97 2e-18 UniRef50_B3C9M5 Putative uncharacterized protein n=8 Tax=Bactero... 96 2e-18 UniRef50_Q11IK5 O-antigen polymerase n=1 Tax=Chelativorans sp. B... 96 2e-18 UniRef50_C9QDI3 O-antigen ligase n=1 Tax=Vibrio orientalis CIP 1... 96 2e-18 UniRef50_Q1QJM5 O-antigen polymerase n=4 Tax=Bradyrhizobiaceae R... 96 2e-18 UniRef50_A9AJI5 Putative O-antigen polymerase n=1 Tax=Burkholder... 96 3e-18 UniRef50_C6I0F5 O-antigen polymerase n=1 Tax=Leptospirillum ferr... 96 3e-18 UniRef50_C3WC59 Predicted protein n=3 Tax=Fusobacterium mortifer... 95 3e-18 UniRef50_Q04RN1 O-antigen ligase/O-antigen polymerase n=2 Tax=Le... 95 3e-18 UniRef50_A3JEK5 Putative O-antigen ligase n=1 Tax=Marinobacter s... 95 3e-18 UniRef50_Q97GP8 Membrane protein of EXOQ family, involved in exo... 95 4e-18 UniRef50_D2UC28 Probable lipid a core-o-antigen ligase protein n... 95 4e-18 UniRef50_A3EV53 Putative O-antigen polymerase n=2 Tax=Leptospiri... 95 4e-18 UniRef50_C3WA18 Predicted protein n=1 Tax=Fusobacterium mortifer... 95 4e-18 UniRef50_UPI0001C16EA2 O-antigen polymerase n=2 Tax=Nostocaceae ... 95 5e-18 UniRef50_Q7NEY3 IctB protein n=1 Tax=Gloeobacter violaceus RepID... 94 7e-18 UniRef50_C7LVM7 O-antigen polymerase n=1 Tax=Desulfomicrobium ba... 94 7e-18 UniRef50_C3KDB6 Putative membrane protein n=1 Tax=Pseudomonas fl... 94 8e-18 UniRef50_C0WC10 O-antigen polymerase n=1 Tax=Acidaminococcus sp.... 94 9e-18 UniRef50_C7PHL3 O-antigen polymerase n=1 Tax=Chitinophaga pinens... 94 1e-17 UniRef50_Q2BMR7 Probable transcriptional regulator SyrB n=1 Tax=... 94 1e-17 UniRef50_B8CZB5 O-antigen polymerase n=1 Tax=Halothermothrix ore... 94 1e-17 UniRef50_Q7V4W6 Possible bicarbonate transporter, ICT family n=1... 93 2e-17 UniRef50_A1TYQ8 O-antigen polymerase n=1 Tax=Marinobacter aquaeo... 93 2e-17 UniRef50_D1C2X7 O-antigen polymerase n=1 Tax=Sphaerobacter therm... 93 2e-17 UniRef50_D1BNH3 O-antigen polymerase n=3 Tax=Veillonella RepID=D... 93 2e-17 UniRef50_Q7MY35 O-antigen ligase RfaL n=3 Tax=Enterobacteriaceae... 93 2e-17 UniRef50_A6QBN3 Putative uncharacterized protein n=1 Tax=Sulfuro... 92 3e-17 UniRef50_A8PNA9 O-Antigen Polymerase family n=1 Tax=Rickettsiell... 92 3e-17 UniRef50_D1Y330 O-Antigen Polymerase family protein n=1 Tax=Pyra... 92 3e-17 UniRef50_B4B3W0 O-antigen polymerase n=1 Tax=Cyanothece sp. PCC ... 92 3e-17 UniRef50_Q6FFS6 Putative uncharacterized protein n=1 Tax=Acineto... 92 4e-17 UniRef50_C0N914 O-Antigen Polymerase family n=1 Tax=Methylophaga... 92 4e-17 UniRef50_A9DSN2 Putative uncharacterized protein n=1 Tax=Kordia ... 92 4e-17 UniRef50_C5CXB6 O-antigen polymerase n=1 Tax=Variovorax paradoxu... 92 5e-17 UniRef50_C7HY66 O-antigen polymerase n=1 Tax=Thiomonas intermedi... 92 5e-17 UniRef50_C9LNB5 Inorganic carbon transporter/0-antigen polymeras... 92 5e-17 UniRef50_Q7NME7 Glr0819 protein n=1 Tax=Gloeobacter violaceus Re... 92 5e-17 UniRef50_Q0B1E1 O-antigen polymerase n=9 Tax=Burkholderia RepID=... 92 5e-17 UniRef50_B5EPG9 O-antigen polymerase n=2 Tax=Acidithiobacillus f... 91 6e-17 UniRef50_B5EA98 O-antigen polymerase n=1 Tax=Geobacter bemidjien... 91 7e-17 UniRef50_B8FGY0 O-antigen polymerase n=1 Tax=Desulfatibacillum a... 91 9e-17 UniRef50_B0THF5 O-antigen polymerase family protein n=1 Tax=Heli... 91 9e-17 UniRef50_C1I9Q4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 90 1e-16 UniRef50_A6GLX2 Putative uncharacterized protein n=1 Tax=Limnoba... 90 1e-16 UniRef50_Q30PV6 O-antigen polymerase n=1 Tax=Sulfurimonas denitr... 90 1e-16 UniRef50_Q2LRM7 O-antigen polymerase n=1 Tax=Syntrophus aciditro... 90 1e-16 UniRef50_Q3SHP5 Putative uncharacterized protein n=1 Tax=Thiobac... 90 1e-16 UniRef50_D1CAK4 O-antigen polymerase n=1 Tax=Sphaerobacter therm... 90 1e-16 UniRef50_Q31FH0 O-antigen polymerase n=1 Tax=Thiomicrospira crun... 90 2e-16 UniRef50_A6VTJ6 O-antigen polymerase n=1 Tax=Marinomonas sp. MWY... 90 2e-16 UniRef50_Q2P774 Membrane protein n=23 Tax=Xanthomonadaceae RepID... 89 2e-16 UniRef50_A4ACC3 O-antigen polymerase n=2 Tax=unclassified Gammap... 89 2e-16 UniRef50_Q5E8K0 O-antigen ligase n=1 Tax=Vibrio fischeri ES114 R... 89 3e-16 UniRef50_C8PLC3 O-antigen polymerase family protein n=1 Tax=Camp... 89 3e-16 UniRef50_B4CZW4 O-antigen polymerase n=1 Tax=Chthoniobacter flav... 89 3e-16 UniRef50_A6DE46 O-antigen polymerase n=1 Tax=Caminibacter mediat... 89 3e-16 UniRef50_C0QCL9 RfaL n=2 Tax=Deltaproteobacteria RepID=C0QCL9_DESAH 89 4e-16 UniRef50_Q1QWW2 O-antigen polymerase n=1 Tax=Chromohalobacter sa... 89 4e-16 UniRef50_C6LCR5 O-antigen polymerase family protein n=1 Tax=Brya... 89 4e-16 UniRef50_D2RP26 O-antigen polymerase n=1 Tax=Acidaminococcus fer... 89 4e-16 UniRef50_C9Y124 Putative uncharacterized protein n=1 Tax=Cronoba... 89 4e-16 UniRef50_C5V422 O-antigen polymerase n=1 Tax=Gallionella ferrugi... 89 4e-16 UniRef50_Q67QF8 Putative uncharacterized protein n=1 Tax=Symbiob... 88 5e-16 UniRef50_Q5LT75 O-antigen polymerase, putative n=1 Tax=Ruegeria ... 88 5e-16 UniRef50_A6T1Z8 Uncharacterized conserved protein n=1 Tax=Janthi... 88 5e-16 UniRef50_C8VYR5 O-antigen polymerase n=1 Tax=Desulfotomaculum ac... 88 7e-16 UniRef50_C6JNS2 Putative uncharacterized protein n=1 Tax=Fusobac... 88 7e-16 Sequences not found previously or not previously below threshold: UniRef50_B8FDD3 O-antigen polymerase n=1 Tax=Desulfatibacillum a... 112 3e-23 UniRef50_C7M4U7 Tetratricopeptide domain protein n=1 Tax=Capnocy... 109 2e-22 UniRef50_A5IIX8 O-antigen polymerase n=6 Tax=Thermotogaceae RepI... 103 9e-21 UniRef50_C3QVV3 Predicted protein n=4 Tax=Bacteroides RepID=C3QV... 100 2e-19 UniRef50_B7IG67 O-Antigen Polymerase family n=1 Tax=Thermosipho ... 99 3e-19 UniRef50_UPI000185C723 O-antigen polymerase family protein n=1 T... 99 3e-19 UniRef50_A4TQL0 O-antigen biosynthesis protein n=31 Tax=Yersinia... 98 7e-19 UniRef50_C8XEV0 O-antigen polymerase n=1 Tax=Nakamurella multipa... 97 9e-19 UniRef50_Q5LB39 Putative membrane protein n=9 Tax=Bacteroides Re... 97 9e-19 UniRef50_A8GCN8 O-antigen polymerase n=8 Tax=Enterobacteriaceae ... 97 1e-18 UniRef50_Q475L7 O-antigen polymerase n=5 Tax=cellular organisms ... 96 2e-18 UniRef50_B4RIX1 Possible integral membrane protein n=21 Tax=Neis... 96 2e-18 UniRef50_UPI0001968C3F hypothetical protein BACCELL_00757 n=1 Ta... 95 4e-18 UniRef50_A9BFF9 O-antigen polymerase n=1 Tax=Petrotoga mobilis S... 94 7e-18 UniRef50_Q7NHG4 Glr2573 protein n=1 Tax=Gloeobacter violaceus Re... 94 9e-18 UniRef50_C6IP29 O-antigen polymerase n=3 Tax=Bacteroides RepID=C... 94 1e-17 UniRef50_Q2JUE2 Putative inorganic carbon transporter/0-antigen ... 94 1e-17 UniRef50_A5UVV0 O-antigen polymerase n=2 Tax=Roseiflexus RepID=A... 94 1e-17 UniRef50_B4WNG9 O-Antigen Polymerase family n=1 Tax=Synechococcu... 94 1e-17 UniRef50_C6M4U2 O-antigen polymerase n=5 Tax=Neisseria RepID=C6M... 92 3e-17 UniRef50_C6BCR1 O-antigen polymerase n=6 Tax=Ralstonia RepID=C6B... 91 6e-17 UniRef50_Q8YM67 All5073 protein n=20 Tax=Cyanobacteria RepID=Q8Y... 91 9e-17 UniRef50_A8RE07 Putative uncharacterized protein n=1 Tax=Eubacte... 90 1e-16 UniRef50_B4DAG7 O-antigen polymerase n=1 Tax=Chthoniobacter flav... 90 2e-16 UniRef50_C1XRI3 O-Antigen Polymerase n=1 Tax=Meiothermus silvanu... 90 2e-16 UniRef50_A8HZX0 Putative membrane protein n=1 Tax=Azorhizobium c... 89 3e-16 >UniRef50_P27243 O-antigen ligase n=5 Tax=Escherichia coli RepID=RFAL_ECOLI Length = 419 Score = 214 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 419/419 (100%), Positives = 419/419 (100%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL Sbjct: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 Query: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV Sbjct: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 Query: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG Sbjct: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 Query: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF Sbjct: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 Query: 241 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI 300 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI Sbjct: 241 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI 300 Query: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY Sbjct: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 Query: 361 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN Sbjct: 361 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 >UniRef50_Q4QTN0 WaaL n=1 Tax=Klebsiella pneumoniae RepID=Q4QTN0_KLEPN Length = 416 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 119/408 (29%), Positives = 203/408 (49%), Gaps = 3/408 (0%) Query: 7 LHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQEN 66 +H + LK ++ + +L F+ ++ + KIY + + +L R Sbjct: 1 MHRVLNTRLKIKNMVLNLAGLLYLFTFMLFYAAPVEMRKIYYLAGYLTFFVALLGCRSLT 60 Query: 67 YNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTS 126 N + + L GL L WY+ +S + + Y SY T K+ + + IVFL Sbjct: 61 SWKNNRDIAGATALFGLTLLGWYAL-NFTHSEYWSIYDSYKETGKVLLITALIVFLVSNL 119 Query: 127 QLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA 186 + E + L YA+Y E+ R+ + AT AY + IV A Sbjct: 120 RFSFPAERFSWLLIVAGLATNAYAIYQGLEIESVRLQIELDRATVIAYIFTMTNIVMLAA 179 Query: 187 ILYTKKNHPF-LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIV 245 IL K + + LFLL + + +A T+TRA LL FP++ + LI + K+ Sbjct: 180 ILELKSQYRYFLFLLAALSGFTAIAYTETRAALLTFPVLIILLLIVHPRVRKKQLLKLGT 239 Query: 246 LLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFS 305 I +LA + I F++ + +RY ND + Y + NSV+S+G+RLAM++ GL + +P Sbjct: 240 AFIVMLALLAIAFHQKLTDRYQGLRNDASQYQDNNSVSSIGSRLAMFQSGLQAALDAP-F 298 Query: 306 FRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY 365 SAE R +++ V + +L GAL++ +VH+HNE+IE SL+G+ G+ + + Y +L Sbjct: 299 GESAERRNDNIKRQVEKKPKLTGALDYMDVHMHNELIENFSLRGVGGVITLIIFYATLLI 358 Query: 366 IAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 A++K + +LTL ++ GLSDVI + + II +A++L ++ Sbjct: 359 NAWRKCNVMQGMLTLSVIIYGLSDVIFFGKEAVIIFSTALILSILYQK 406 >UniRef50_A8ARL1 Putative uncharacterized protein n=2 Tax=Citrobacter RepID=A8ARL1_CITK8 Length = 427 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 115/397 (28%), Positives = 202/397 (50%), Gaps = 6/397 (1%) Query: 20 ILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF 79 ++ + Y C ++ + ++ ++K++ A++ L + + + KNL+LP+ + Sbjct: 21 VIYFLFYAGCLTTLAMLLINPDEALKVFIACAVLSLPIIGKHSKSLLSDKKNLLLPVMLL 80 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQ----LKSKKESV 135 L GL+ +IW FK S F Y SY N K+ IF + I + Sbjct: 81 LFGLVQIIWVEIFKEPGSSFTGAYRSYQNGGKVMIFAALIATALQSPIACAMKDRITRYW 140 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 + T +L AGY + + N R+ G TGAAY+ + +++ AI+ + H Sbjct: 141 VITTAVGLYLFAGYQLLTSPDPLNYRVELGFEHPTGAAYALTFVALLASQAIINLRLKHT 200 Query: 196 -FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASI 254 L+LL+ L V+ +TQTRA +L++P++ + +Y + +++ I + Sbjct: 201 ILLYLLHFLVSLAVITITQTRAAILVYPVLSIGLFFLHYRHNRTVLLRTLLAFIVLAGLA 260 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 I I+ RYN + D++SY+ NS TS+GARLAM G++ + +S E R Sbjct: 261 AIPLKSVIEKRYNSFVTDMHSYSKKNSNTSIGARLAMQRAGIDAGKNHYW-GQSLEQRDA 319 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG 374 M + LRGAL F ++HLHNE I+ SLKG+ G+ + LFLY ++F AY +R+ Sbjct: 320 GMRDFARQDTSLRGALGFVDIHLHNEFIDTFSLKGISGVIALLFLYLAMFLKAYTQRSPL 379 Query: 375 LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 L I++ IV GLSD++++A+ + + A+ +++ Sbjct: 380 LFIISSAIVIYGLSDLLLYAKGETLSSMLALCAAMML 416 >UniRef50_D0KD48 O-antigen polymerase n=3 Tax=Pectobacterium RepID=D0KD48_PECWW Length = 427 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 121/417 (29%), Positives = 207/417 (49%), Gaps = 5/417 (1%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 ML + K ++ S++ L + + C ++ I + + ++ +T + + ++ Sbjct: 11 MLNELRYELGKTPSISSAVALNAV-FPGCLLTLAIMPFSSILAGWLFYLTGSLSVFYVVT 69 Query: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 R + L++PL + IG+ +LIWY + +S F Y++Y +A I G+FIV Sbjct: 70 HLRTVIVAKRRLLIPLCLLAIGITNLIWYYHYYQPDSLFPYVYNAYRTSAHAGILGAFIV 129 Query: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 L + + +K+S+ Y + ++ L YA Y + RI GTAT AAY IG Sbjct: 130 LTALHIRQQQQKQSLFYII-AICVLALSYAFYQSLFSGMHRIGLAFGTATSAAYFLTFIG 188 Query: 181 IVSGVAILYTKKNHPFLFLLN-SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKK 239 +S A+L + + L V + LT+TRA + ++PI+ L++ + + Sbjct: 189 ALSAQALLKLDSTYKYYLYLGHFLLVTVAILLTETRAAIFVYPIVGATILLSEVRHNKRL 248 Query: 240 FTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIF 299 F + + A L + +F + I R N+ ND++SY NS TS+GAR+AMY+ G+ Sbjct: 249 FIKAFIGSAATLLLCLFLFQETIHQRVNDLFNDVHSYNMNNSKTSVGARIAMYQSGVEAG 308 Query: 300 IKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFL 359 + +SAE R + + L GA+E+ NVHLHNE+++A SLKGL G + L Sbjct: 309 EDA-LLGQSAEQRTARIITQAEQKPSLAGAVEYLNVHLHNEVVDAFSLKGLPGAILLILL 367 Query: 360 YFSLFYI-AYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 Y SLFY + R+ L ++ GLSDVI+++R + I + L + + Sbjct: 368 YASLFYFSFFVLRSHLSAALLFSLLMYGLSDVILYSRDMLIAWLMTFCLGTTLTGKW 424 >UniRef50_Q9ZIT0 Lipid A-core:surface polymer ligase WaaL n=26 Tax=Enterobacteriaceae RepID=Q9ZIT0_ECOLX Length = 417 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 106/399 (26%), Positives = 199/399 (49%), Gaps = 9/399 (2%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 ++ + ILC FS++ + + + K + I+ L + ++ N L++ +S+ L Sbjct: 12 IKSLILILCIFSLMTLSLWDDVATKFLHAAGIISALYFLATPKKTITNNPTLLIFISLCL 71 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV----L 136 +G++++IWYS +KV S + Y + T KI + +FI + K L Sbjct: 72 LGIVNIIWYSHYKVSGSVYTNAYRGPMETGKIALCSAFIFLVLFAKNEMRTKIKFGKLIL 131 Query: 137 YTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP- 195 + + L +AM+ + DR++ AT A Y + +++ + IL + H Sbjct: 132 FASLATQLLFFAHAMWQHFYLNVDRVALSASHATTAGYIILFPSLLASILILKSDFRHKT 191 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 L+ +N L + +T+TRA +L+FP + ++ + + + L + V Sbjct: 192 TLYTINFMLSLCAVIVTETRAAILVFPFFALILIVMDSYINKRINYKLYCFITIALLAGV 251 Query: 256 IIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES 315 F + R N+ NDL +Y++ N+ TS+GARLAMYE+GL + +S E RAE Sbjct: 252 FSFKDTLLMRMNDLNNDLVNYSHDNTRTSVGARLAMYEVGLKTYSP---IGQSLEKRAEK 308 Query: 316 MNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK-KRALG 374 ++ L + RL GAL + + HLHN++I+ S +G+ G+ T+ + ++ A + + Sbjct: 309 IHELEEKEPRLSGALPYVDSHLHNDLIDTLSTRGIPGVVLTILAFSAILIYALRTAKEPY 368 Query: 375 LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 +LIL ++ +GLSDVI++++ +P + I+LL Sbjct: 369 ILILLFSLLVVGLSDVILFSKPVPTAVFITIILLCAYFK 407 >UniRef50_Q0K7R4 Membrane spanning protein involved in lipopolysaccharide biosynthesis n=2 Tax=Cupriavidus RepID=Q0K7R4_RALEH Length = 429 Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats. Identities = 77/431 (17%), Positives = 162/431 (37%), Gaps = 24/431 (5%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 ML +L + Y + ++ L + F +++ FV T S Y + ++L+ Sbjct: 1 MLLMTRLQRSQSYGVDKALYLAACAVLAAFPALM--FVKPTVSNLCYGLLLGWSAITLVA 58 Query: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 GR+ L+ F++ + L + S + SYL F FI Sbjct: 59 GGREGRTECGGLLRRYWFFMLAMAALPLAVLLQQLLSGAEEPHVSYL----YLRFALFIP 114 Query: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 + +L + + + L++ A + + G + +ML+G Sbjct: 115 LVFGMVRLGRGGMRSVQWGFVVCALLSA-AWIHEATAAGRPVHVGSSNIIPLSNLSMLMG 173 Query: 181 IVSGVAILYTKKN---HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP 237 I++ ++I + + L LL A LY ++ TR L P++ AL A + + Sbjct: 174 ILALISIGWDRPRDYLQSGLKLLAGFAGLYASYMSGTRGGWLAIPVLAFIALAASHRLTR 233 Query: 238 KKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGL 296 +++V L + + + + +Q R + +++++ + + T G RL ++ L Sbjct: 234 MHKAAAMVGLAGL-MGLAWLGSARVQQRTADVVSEVSQFAQHVTPDTPTGIRLQLWRASL 292 Query: 297 NIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFST 356 + P++ E+ ++ L A+H A + H HNE++ A + G+ G+ + Sbjct: 293 ELIQAHPWTGVGPENFERTLQTLEAQHVITPLAA--TMPHSHNELLHATATLGIPGLLAI 350 Query: 357 LFLYFSLFYIAYKK----------RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIV 406 L LY + + L L G + GL++V+ + + Sbjct: 351 LALYLVPAAFFLRHLGNADRGTQVASAMGLALCCGFMVFGLTEVMFATTLVNAFYSLIMA 410 Query: 407 LLLVINNRNNT 417 + Sbjct: 411 VCFAYVVARKD 421 >UniRef50_Q9ZIS3 Lipid A-core:surface polymer ligase WaaL n=3 Tax=Enterobacteriaceae RepID=Q9ZIS3_ECOLX Length = 417 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 114/403 (28%), Positives = 190/403 (47%), Gaps = 12/403 (2%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 ++L ++ +D + KI N T L LI+ ++ NYN +IL L + L+G + Sbjct: 16 IFLLYLIGLLFVPIDLNITTKIINATGAFSLFLLIVN-KKHNYNKNVIILILGLLLLGAM 74 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 +LIWY +K ++ +R Y YL + K+ +F S L ++ + ++ + + Sbjct: 75 NLIWYEFYKTEDVVYRNAYRGYLESGKLLVFSSLTFLLLSKNKFRQNEKLHFISAILVQI 134 Query: 145 LIAGYAMYINSIHENDRISFGVGT--------ATGAAYSTMLIGIVSGVAILYTKKNHPF 196 ++ A Y DRI AT AAY + S + + K + + Sbjct: 135 IMLCRAYYQGIYLHADRIPLSAMNGNIGQMGAATIAAYVITFTTLYSSIVFIKMKSKYKW 194 Query: 197 -LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 LF N + +T TRA + FP++ + L + + + +L + Sbjct: 195 FLFYANFALSFAAVMMTGTRAAIFTFPLMIMVILFLQHRDQKVFLFKGLSGVFILLLACG 254 Query: 256 IIFNKPIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 +IFNK I R N D+ SY T NS +S+GAR AM G+ F+++S E RAE Sbjct: 255 LIFNKEIDRRINSLKADVISYATKNNSQSSVGARFAMVNAGIKGSPD-GFNWQSLEQRAE 313 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG 374 + L AE+N GAL F +VH+HNEI+E+ S KG +G+ + Y ++ Y +++ Sbjct: 314 KIKALSAENNIYSGALLFLDVHMHNEIVESLSTKGKIGLLVLIMFYVAMIYYCIREKKYI 373 Query: 375 LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 LL+ I+ G+SDVI A+ IP I + L + ++N Sbjct: 374 LLVFPASIMLFGISDVITHAKPIPASWIVCLFLSISFLSKNEP 416 >UniRef50_B2VF67 Lipid A core, surface polymer ligase WaaL n=5 Tax=Enterobacteriaceae RepID=B2VF67_ERWT9 Length = 414 Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats. Identities = 99/401 (24%), Positives = 190/401 (47%), Gaps = 6/401 (1%) Query: 20 ILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF 79 + + Y C + F ++ + + + ++++L R + N I+ L Sbjct: 10 VFSYLIYTCCAIAFATVPFGLKFGKDLFYVASYISFIAIVLNIRYYTQDKLNFIVSLLFL 69 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 GL + W AFK P+ Y SY++TA++ I S I + L ++ +K + L Sbjct: 70 AFGLGTIFWLVAFKQPG-PYIDVYRSYMSTARLVIAMSVISLVALNERIAIQKIT-LVVS 127 Query: 140 YSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFL 199 ++ L+ YA+Y RI T AY I +V +I+ K + +F Sbjct: 128 IAVGLLVNAYALYQGLWLLQARIELNFDRTTIVAYLLTAISLVMMQSIMLLKVRYRLIFY 187 Query: 200 LNSCAVLYV-LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI-AILASIVII 257 + + + Y + LT TRA ++ +P + V +I N P + +I+LL+ +LAS ++ Sbjct: 188 IAAFILSYSTIILTGTRAAMIAYPALIVLTVIVTKNIIPIRHKVAIILLVPVLLASTGLL 247 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 F I++R ++ ++ + + S S+ +R+ M + + K+P +S E RA Sbjct: 248 FKDMIKSRIDDFERNVAAINDTRSENSVFSRVWMQIVAIRTGNKAPL-GQSVEQRANEAM 306 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK-RALGLL 376 ++ + +L A + VH+HNE++E SLKG G+ L Y SL +++++ R L Sbjct: 307 EVIKDDPQLYNARRYLTVHMHNEVLETWSLKGAWGVTLLLSFYGSLILLSFRQSRNSMLF 366 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 +T +V GLSDVI ++ + + AI+ ++ + ++ Sbjct: 367 GVTSALVIYGLSDVIFFSTEATAVFLLAIIASILSAKKPHS 407 >UniRef50_Q6DAU1 O-antigen ligase n=1 Tax=Pectobacterium atrosepticum RepID=Q6DAU1_ERWCT Length = 408 Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 125/406 (30%), Positives = 198/406 (48%), Gaps = 7/406 (1%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 K+ + + Y S+I D + KI+N I+ + L + R+ +++++P Sbjct: 8 KTIKVFSSLIYTSLIISLIAMIFDVKLASKIFNTIGIISAILLFINKRE--IKKESMLIP 65 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 LSI + + +LIW +K S YHSY N KI GS + +T K Sbjct: 66 LSILFLCVTNLIWEQLYKNSGSEIIGLYHSYHNVMKILFLGSSLTLFVMTFSSKHPLTK- 124 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIV-SGVAILYTKKNH 194 L + + +Y R S AT +AY IGI+ S V +L T+K + Sbjct: 125 -NALNIIYTIPFFLVLYYLLSEPEVRFSISDKIATSSAYMISFIGILTSQVILLKTEKRN 183 Query: 195 PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASI 254 F + +N ++ L+ TRA +L +P++ LI K K I+L I + Sbjct: 184 LFFYFINHIIFFTIIVLSGTRAAILAYPLLSAIVLIPAILKDKKINLKLIILYIMVNIVC 243 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 ++ K I +R ++D+N Y +NS +S+GAR+AMY GL FI +P +SAESR Sbjct: 244 LVACQKTIMSRSENLISDINMYNQSNSESSVGARIAMYRSGLTSFIHAPM-GQSAESRQL 302 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI-AYKKRAL 373 + ++ L GA + +HLHNE+IEA SLKG++G + L LY SLFY ++ + Sbjct: 303 DIQKQAEQNPSLSGAALLTGIHLHNELIEAISLKGIIGGMALLLLYASLFYFSSFILKDY 362 Query: 374 GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 L LTL +V GLSDVI + ++ + I L +++ RN + Sbjct: 363 ALTSLTLSLVIYGLSDVIFYGKNATTVWIVTYCLSILLVKRNRGVQ 408 >UniRef50_C9KNY6 Inorganic carbon transporter n=2 Tax=Veillonellaceae RepID=C9KNY6_9FIRM Length = 671 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 49/446 (10%), Positives = 125/446 (28%), Gaps = 85/446 (19%) Query: 23 IITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIG 82 I + + + + + + + I ++ ++ +P +F Sbjct: 31 AIAWYGLLAEVFFLPLSPSVAT-VALLIGIAGTALRFYVDKEFHFRHLRFDVPAVLF--- 86 Query: 83 LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSL 142 + + S + F + Y+ Y + I + + +S+L + Sbjct: 87 -VAVSGLSVLSSPDRGF-SFYNYYNLVGVYVLTYLLI---GQNVREPGQMKSILRMACAA 141 Query: 143 SFLIAGYAMYINSIH----------------ENDRISFGVGTATGAAYSTMLIGIVSGVA 186 + ++ Y Y R+ A +I ++ Sbjct: 142 AVIVLLYGYYQFLFGIDISSMKWVDGDAFPELRKRVFSTWENPNILAGYLDIIICLAFGL 201 Query: 187 ILYTKKNHPFLFL-LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIV 245 + + + L A LA+T R L+ +I + + ++ Sbjct: 202 FMKCRDRERRILLGAFMLAAAACLAMTYARGACLVIAVILAGYGVLRDRR--------VL 253 Query: 246 LLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFS 305 + ++ +I+ + + + R + TS RLA +E + + PF Sbjct: 254 VACILVVAILFVLDPMLYERITSVFTKV--------DTSTEMRLAFWESTVAMIQDHPFL 305 Query: 306 FRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY 365 + + VH HN + + G+ G + + +F Sbjct: 306 GIGWGAYWMVYPEY----DFYLQGANVLIVHAHNIYLNYMAEIGIPGAVAFFWFFFGTMI 361 Query: 366 IAYKKR---------------------------------------ALGLLILTLGIVGIG 386 +A + +LG+ + L + G Sbjct: 362 MALRTHFPADTGAAEQATPFGKYQMPFRWNRLWHDWKEHDILAGLSLGIGLAVLSVALNG 421 Query: 387 LSDVIIWARSIPIIIISAIVLLLVIN 412 L+D +++ +++ L ++ Sbjct: 422 LTDDLLFNIPSSMLLWMLAALAGALS 447 >UniRef50_D0KD50 O-antigen polymerase n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KD50_PECWW Length = 410 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 124/396 (31%), Positives = 194/396 (48%), Gaps = 7/396 (1%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 + Y S+I D + KI+N I+ + L+L R+ +N+++PLS+F + + Sbjct: 16 LIYTSLIISLIAMIFDVKLASKIFNTIGIISTILLLLNRRR--IKKENILIPLSMFFLCV 73 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 +LIW +K S YHSY N KI GS + +T K L + Sbjct: 74 TNLIWEQIYKNGESEIIGLYHSYHNVMKILFLGSSLTLFVMTFSSKHTLSK--KALNIIY 131 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIV-SGVAILYTKKNHPFLFLLNS 202 + +Y R S AT +AY IGI+ S +L T+KN+ + +N Sbjct: 132 TIPFFLLLYYLLSEPEIRFSISDRIATSSAYMISFIGILTSQYILLKTEKNNLLFYFINH 191 Query: 203 CAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPI 262 ++ LT TRA +L +P + LI K K I L I + ++ K I Sbjct: 192 ITFFIIILLTGTRAAILAYPFLSAIVLIPVILKDKKINLKLIALFIMVNIICLVACQKTI 251 Query: 263 QNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE 322 +R ++D+N Y +NS +S+GAR+A+Y GL FI +P +SAESR + E Sbjct: 252 ISRSENLISDINMYNQSNSESSVGARIAVYRSGLTSFIHAPM-GQSAESRQLDIQKQAEE 310 Query: 323 HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI-AYKKRALGLLILTLG 381 + L GA + +HLHNE+IE+ SLKG++G + LFLY SL Y + + L+ LTL Sbjct: 311 NPSLSGATLLTGIHLHNELIESISLKGIIGGVALLFLYASLVYFSLFTLKDYALISLTLS 370 Query: 382 IVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 ++ GLSDVI + ++ + + L +++ RNN Sbjct: 371 LIIYGLSDVIFYGKNTTTVWVVTYCLSILLVKRNNN 406 >UniRef50_B5SFB1 Lipopolysaccharide o-antigen ligase protein n=4 Tax=Ralstonia solanacearum RepID=B5SFB1_RALSO Length = 435 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 59/401 (14%), Positives = 132/401 (32%), Gaps = 14/401 (3%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 + + V + + ++ L + + R + + L G Sbjct: 21 VFLLIYPALTVVKQGGASALLIAAGVLSLGAGVAVRRVLSGPATPYGADRLVRLTGWALC 80 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 A + + + + F+ + L + L+ + + Sbjct: 81 APLVAVILSEAWHGQLRWNAFDAPARFLAAVPLFLLLRRAPLRW-LRWADGSFAVAALAG 139 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL---NSC 203 G ++ R+ +++G++S ++I + +K+ + LL Sbjct: 140 LGVCLWAARDWGEGRMGSTFLNPIHFGDIALVLGVLSALSINWWRKDPLAVRLLKIGGLL 199 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQ 263 A L LT +R + P I + +I P ++ + + + + I + I+ Sbjct: 200 AGLVASLLTGSRGGWVALPFILMLVVIMRGRDKPARWRVLVPAVAVLGVVALYIVSGTIR 259 Query: 264 NRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEH 323 R + DL Y TS+G RL +Y+ L + + P A+S+ LV Sbjct: 260 ERIHMVWADLAQYGQGQKDTSVGIRLQIYQAALMLIPQHPIFGLGPGGFADSLQALVDAG 319 Query: 324 NRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK----------KRAL 373 A + HN+++ + GL+G + + ++ + ++ + AL Sbjct: 320 RMTATAAQLGRGEAHNQLLAYTANFGLVGGLAIVAIHLVPGLLCWRCLKAPAAPMRRAAL 379 Query: 374 GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 + L GL+ I + + I L I + Sbjct: 380 MGAVFALAFFVFGLTVEIFTLKMTASFYAAVIACLAGIASH 420 >UniRef50_B6XJV7 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XJV7_9ENTR Length = 400 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 102/392 (26%), Positives = 190/392 (48%), Gaps = 11/392 (2%) Query: 28 LCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLI 87 LCF ++++ + KI+N I+ +L+ + + N +I+ + +FLIG+ LI Sbjct: 4 LCFIAILLLPFKPDITSKIFNFAGILSVLTFLSSPKVYLKNK-IVIVAIPLFLIGITHLI 62 Query: 88 WYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFL-I 146 W +K +S +R YH Y KI +FGSFI+ +T + + ++S + I Sbjct: 63 WVELYKTSDSIYRNVYHGYFQMGKIALFGSFILLITHNALKNILISKLHLITATISQISI 122 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVS----GVAILYTKKNHPFLFLLNS 202 GY +Y R+ A+ A + + +S + + + + +L+ L+ Sbjct: 123 LGYTVYQEFYLHIPRVELAFHNASNATGAAYAMIFLSLYAQFIFLSHGSRIKYYLYSLSI 182 Query: 203 CAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPI 262 + + LT+TRA +LL+P+I + Y+ ++ ++ I I IF++ I Sbjct: 183 LITFFCVVLTETRAGILLYPVISLCIFFLYFRQNKNLKLKFVLFPIIAALIICAIFSETI 242 Query: 263 QNRYNEALNDLNSYTNANS-VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 R A N++ +Y +S TS+G RL+M + G + + F ++SAE R + L Sbjct: 243 IQRMQSASNEIIAYIKNDSTSTSVGDRLSMIQTGF--YASNGFLWQSAEERNSKIIELAK 300 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLM-GIFSTLFLYFSLFYIAYKK-RALGLLILT 379 R GA+E HLHN+++E S KG + G+ L Y ++F YK+ + +L T Sbjct: 301 NDKRFAGAIEHMQAHLHNDLMEELSTKGWINGVLLILLFYVAIFAYGYKQAKNPFILGFT 360 Query: 380 LGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 ++G+GLSD +I + + + + ++L+ Sbjct: 361 FVLIGLGLSDTLIISTQVSLSWVLVLILMTSC 392 >UniRef50_C6P739 O-antigen polymerase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P739_9PROT Length = 425 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 122/339 (35%), Gaps = 16/339 (4%) Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 + + T H Y ++ ++ + L +L+ VL + L+ +I Sbjct: 75 MSVAILISQTYLQNYTAHPYDAASRYWLAIPVFLLL---QRLRPAVFVVLQVAFPLAAII 131 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL---NSC 203 +R G ++ G++S +I + +++ L LL Sbjct: 132 GFMMSNDLGAGSENRSGIGTLDLIHFGDLELIFGVLSLFSINWLGRDNKLLRLLKVTGFM 191 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQ 263 L + +R P+ + ++ K ++ ++ + + + V + + Q Sbjct: 192 LGLLASFESGSRGGWFAIPVFILIYFYFRTSRVSLKMAAASLIATSFVIAFVYLASGTFQ 251 Query: 264 NRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEH 323 +R NE +ND+ ++ N TS G R +Y+ +IF P E A M ++ Sbjct: 252 HRVNELINDIATFEQGNRDTSTGVRWQLYKAAADIFAHHPIFGVGPEGFALEMQPMLDAG 311 Query: 324 NRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY----------KKRAL 373 A E +HN+I+ + G+ G+ + L YF F + + ++ + Sbjct: 312 KITPLAAELGRGEVHNDILSKAAGMGIFGLAALLASYFVPFGLFWRATKSTLREVRRAGI 371 Query: 374 GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 + GI+ G++ + + +LL Sbjct: 372 LGIAFVSGILVFGVTVEFLNLTMATAFYGFTVAVLLAAC 410 >UniRef50_B2U905 O-antigen polymerase n=2 Tax=Ralstonia pickettii RepID=B2U905_RALPJ Length = 426 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 64/390 (16%), Positives = 142/390 (36%), Gaps = 25/390 (6%) Query: 40 NTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPF 99 +FS+ + + + R ++ L +++ + LI Sbjct: 40 LSFSLLLVAAFGWMLSAPAAVMSRLRAMWREHRWLIVAMAAMPTAMLISAQLNPAAPRNV 99 Query: 100 RATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEN 159 Y QL+ K+ + L + Y+ Sbjct: 100 PFAYGRLWLFGLAL---------FALLQLRPKQLESVQWGCVAGALASAVWAYLELRAGR 150 Query: 160 DRISFGVGTATGAAYSTMLIGIVSGVAILYTK---KNHPFLFLLNSCAVLYVLALTQTRA 216 + A ++L+ + + ++I +T+ L LL CA LY L+Q R Sbjct: 151 VGMVGAFSNAIPFGNLSLLMALFALMSIGWTEDDGWALIALRLLAGCAGLYASYLSQARG 210 Query: 217 TLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY 276 + P++ + A+ + S KK ++++L L ++ + + ++ R+++A+ D+++Y Sbjct: 211 GWIAIPVLLLIAVATLRHVSWKKRLTALLLFFVFLIAVCVS-SSVVRTRFDQAMEDIHAY 269 Query: 277 TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVH 336 + TS+G R +++ + + P + ++ + AE + A F H Sbjct: 270 QAGQTNTSVGIRFQLWKAATLMLTRHPLAGVGRGQFGPALKAIHAEGLITQEATAF--EH 327 Query: 337 LHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR----------ALGLLILTLGIVGIG 386 HNE + G+ G++GI + L LY + L L +G + G Sbjct: 328 AHNEFLYNGATLGVLGIGALLALYLVPAAYFLRAALCDDRVLRTTGAMGLTLCVGFLLFG 387 Query: 387 LSDVIIWARSIPIIIISAIVLLLVINNRNN 416 L++V++ + + + +R Sbjct: 388 LTEVMLIIAQTVVFYSVMVAVFTAHIHRRR 417 >UniRef50_C5V1T7 O-antigen polymerase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1T7_9PROT Length = 414 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 67/415 (16%), Positives = 150/415 (36%), Gaps = 22/415 (5%) Query: 15 LKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLIL 74 +K+++ +E ++ ++ + + I+ +++L+ Q + + Sbjct: 1 MKNNLTIERSMMLIMLMYPVLMLSVKGSLSAFFIVLCILSIVTLLKNKTQPVFINSQDKI 60 Query: 75 PLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKES 134 L A + SY ++ F+F I F + K Sbjct: 61 ------YILAMSSILVATILSQLIHGKIIVSYWDSPARFLFAVPIYFAL--KKQSMKVFE 112 Query: 135 VLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH 194 + L + A + R + +++GI+S +I + + + Sbjct: 113 LFQFGLPLGAIAALLIQHQEVGVFGTRATNTFLNPIHFGDLALMLGILSACSINWFRLDS 172 Query: 195 PF---LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAIL 251 L ++ A +Y L+ TR + P+I + L+ + KK ++ + A+L Sbjct: 173 RLVVMLKVIGLIAGMYASILSGTRGGWVAIPVILLVCLVVWKVYDVKKLAGGLLAVAAML 232 Query: 252 ASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES 311 A F IQ R +++ ++ S + N TS G RL +++ IF+ +P + S Sbjct: 233 AVSYFAFTP-IQQRVSDSYVEIRSIASGNLETSTGFRLQIWKGASQIFLANPIAGVSPSG 291 Query: 312 RAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA---- 367 ++ L A + +H++I + + G+ G+ + ++ Sbjct: 292 FDNAILSLGKAGVISPMAADLGVNEVHSQIFSSAARLGIFGLIAYFLVHLVPLKFFVNSM 351 Query: 368 ------YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 +K L + L +G + GL+ + + + V+LL N +N Sbjct: 352 RSRNNIIQKAGLMGMSLVVGFIVFGLTVEMYNLKMVATFYSLTGVVLLACCNNDN 406 >UniRef50_B7X132 O-antigen polymerase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X132_COMTE Length = 434 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 123/332 (37%), Gaps = 29/332 (8%) Query: 100 RATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEN 159 + + AK + + +L S+ + ++++ L A+Y + + Sbjct: 92 WFSAAGWGYGAKYALAALSLWYL---SKSGVRLPAIVWGLALGCAGALAIAVYQAGVLKM 148 Query: 160 DRISFGVGTATGAAYSTMLIGI--VSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRAT 217 R++ G A M +G +S + K+ L ++ L+ +R + Sbjct: 149 PRVT-GFTNAIQYGGIAMYLGFATLSLAVLGRWSKSRAAALGLLGACGVFASFLSDSRGS 207 Query: 218 LLLFPIICV-AALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY 276 ++ P++ L+A+ N + + + ++ + + + + ++ R EA +++ Y Sbjct: 208 WVVIPLLIAAIWLMAWLNGYKRLASLAAAAMLMLGLIVAVPAYQKLEQRSTEAAREVSQY 267 Query: 277 ---TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFS 333 +VTS+G RL + + +++ + PFS + +V + +E+ Sbjct: 268 LQDPQKYAVTSVGQRLEQWRLAIHLIEQRPFSGWGLAGYPAAKKQMVDQGLAHPSVMEY- 326 Query: 334 NVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLI---------------- 377 H HNEI++ +GL G+ L Y I + Sbjct: 327 -GHAHNEILDMWVKRGLPGLILLLAFYAVPAAIFWPTPRRLARADAAHRPRLLALRAAAT 385 Query: 378 -LTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 L L G G + V S + I ++ +L Sbjct: 386 LLPLAYFGFGWTQVFFAHNSGNMFYIFSLAVL 417 >UniRef50_A5KZV1 Putative O-antigen ligase n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZV1_9GAMM Length = 399 Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats. Identities = 62/398 (15%), Positives = 142/398 (35%), Gaps = 20/398 (5%) Query: 15 LKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLIL 74 + I + FF++ + + K+ + I ++S++ ++ N Sbjct: 4 INRKQIYTAFLLLPYFFAVTGMLILDGGDKKMIPLFLISIIVSILAFKKETILNNIQ--- 60 Query: 75 PLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKES 134 +W + + F YH + + G + + ++ ++ + Sbjct: 61 ---------SPFVWLISISCIYTVFSYYYHGSSSRELRALIGLTLFLIAFPYKILTQ-KV 110 Query: 135 VLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH 194 + + + S I ++Y N +R + + A ++ I + + Sbjct: 111 IQWVVLICSLAICANSVYFNLYIGMERDAGYINPIPYATACALISIIAFSILLDNPSLKE 170 Query: 195 PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKS---PKKFTSSIVLLIAIL 251 L L++ L + L++ R L F + LIA K+ K S V + Sbjct: 171 KLLPLVSFLISLPPIILSEARGIWLAFSLSIFFILIAKCIKNPPSKSKVLLSFVFTAVLT 230 Query: 252 ASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES 311 ++ +F + I RY + + ++ + + TS+G RL M+ + + + P E Sbjct: 231 STGAFLFKEKINERYEKTIYEIERIQSNDYSTSIGLRLKMWMLVPELIKQKPILGHGQEQ 290 Query: 312 RAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR 371 R E + + F++ H HN+ ++ G++G+ + L I K Sbjct: 291 R-EILRSKLKRGEISHQLFYFASAHYHNQFLDKMVKSGVIGLTLVIGLLIYPLMIVKKLP 349 Query: 372 A---LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIV 406 + ++ L GL+DV ++ + +V Sbjct: 350 SLDTYIVIGLVSLFFIAGLTDVPFNHPQPLMLYLLFLV 387 >UniRef50_Q1YWB6 Putative O-antigen ligase n=2 Tax=Photobacterium profundum RepID=Q1YWB6_PHOPR Length = 393 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 66/401 (16%), Positives = 129/401 (32%), Gaps = 20/401 (4%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 L ++ YI F +++ + I + I L L +EN Sbjct: 10 LMLLPYIWLFTGLLVLRNSDKTMIVMMIIAIAATLFHRGLVPIKENLKNDKT-------- 61 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 +W + F YH + + G+ + + +L +++ + TL Sbjct: 62 ------LWLLLVITGYALFSYFYHGGSSREIRALIGASLFLICFPRELLTQRVLLGLTLL 115 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL 200 + S L YA Y + +R + + A + + N L Sbjct: 116 A-SSLCLAYACYYSLYININRAEWPINAIPFATMCAVFGILAIAQLSRTVSLNVKLQAAL 174 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 L + T TR L F I + L+ + + + L A+L+ I Sbjct: 175 ALIFSLTAIIFTDTRGIWLGFTIAAIIILLLKIKNKGINWKYTTIGLAALLSIG-FIVKP 233 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 I+ R + ++N+ T+ N TS+G R M+++ ++ + + A + L Sbjct: 234 QIEQRIVQTQAEINAITSGNLDTSIGFRFQMWKLAPDMLKDNYILGLG-DKHALRFDKLY 292 Query: 321 AEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF---YIAYKKRALGLLI 377 + F H HN+ ++ G +G+ L L R ++ Sbjct: 293 NQGLVSERLFNFKPAHYHNQYLDNFIKTGGIGLLLFLALLIVPITQVKYVSTDRKYKIIG 352 Query: 378 LTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTI 418 L+DV + I L+ +N + Sbjct: 353 TVGLFAIAALTDVPFNHGQTLSTYLLLICGLINYSNPKKGL 393 >UniRef50_D1T571 O-antigen polymerase n=3 Tax=Burkholderia RepID=D1T571_9BURK Length = 433 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 50/385 (12%), Positives = 123/385 (31%), Gaps = 22/385 (5%) Query: 22 EIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSI--F 79 I L + + + F+ ++ T + L N + ++ + Sbjct: 1 MIFASSLVWLTSALLFLAPAVNLMWRGGTGYCFFALVALALGAAIVNRRMPGYFSALRTY 60 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 + ++ + + + + +VFL L + + Sbjct: 61 RWYTIGMLAFVVGIGAQQLALGYWLPREFDSVARFVFALLVFLLLRQLPSRNLRMIGWGC 120 Query: 140 YSLSFLIAGYAMYI---NSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF 196 + + + +A+ + +R++ A + +L+ +S + + Sbjct: 121 AAGALAVGAWAILNPPPGGWTDANRLNNSYTNAIPFGDTALLLAFLSVFTLGWDNPRDWR 180 Query: 197 LFL---LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 + + L + Y L+ TR L P+ V L Y+ +K + L+ ++ + Sbjct: 181 VLVPRVLALVSGGYASFLSGTRGGWLAVPV-FVVLLGMQYHWFTRKKRLLVATLVIVIGA 239 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 ++ + +Q R+ E ND++ T+ G RL ++ I + P Sbjct: 240 GGVLSTERVQKRFAEVPNDVSMMQKGEDFTATGLRLQLWNASRIIVERHPVWGVGKGHLV 299 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR-- 371 + + E N H++ + G +G+ L Y+ + ++ R Sbjct: 300 NELGAMAKRGEV---KAEIVNERAHSDFFSTLAEMGAVGVICLLLFYYGMTVYFWRHRHA 356 Query: 372 --------ALGLLILTLGIVGIGLS 388 + L + V GL+ Sbjct: 357 SDPAIRAASYSGLAVASSTVIFGLT 381 >UniRef50_B2SL57 O-Antigen Polymerase family n=11 Tax=Xanthomonadaceae RepID=B2SL57_XANOP Length = 425 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 108/349 (30%), Gaps = 20/349 (5%) Query: 81 IGLLDLIWYSAFKVDNSPFRATY--HSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYT 138 L + W + + S H + F L+ ++ + Sbjct: 71 WSLRAVGWLTVAVIAISLLSIALFEHGLRDVGNRSRFLVLPWAALWAYALQPRQIWLWRG 130 Query: 139 LYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLF 198 F A+ + + G A A +++ +V Sbjct: 131 ALVGVFAAMLIALLQ--VMNGAGRAEGFTNAIVFADIALMLLVVGVFCRPDGNVRW---L 185 Query: 199 LLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIF 258 L + A + V+ L+ +R LL + +S + + + + + + Sbjct: 186 LGAAIATVVVIVLSGSRGVLLSLLATLGVLIWGAPWRSARVRLLTFIGGPVLAVGVALSV 245 Query: 259 NKPIQN-RYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 R E +DL Y ++ +S GAR+ + + P + ++M+ Sbjct: 246 PALTDQMRLGELQSDLQRYEVGDTDSSAGARIERLHVAWDTLKAHPLTGVGVGRFDDAMH 305 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA---------- 367 L A H HN++ E + +G+ G+ + +Y ++ Sbjct: 306 DLPAC-AADPSLFRCQLGHAHNDLAEWSATQGVPGLLLLIAVYGVPLWVFARLHRRSGQQ 364 Query: 368 -YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 ++ A ++L + GL+ + + + + +L+ + R Sbjct: 365 QFRGPAAAGVMLVISYALCGLTQSMFAHQVAASFYTAMVGVLVGLAARQ 413 >UniRef50_A1WKR6 O-antigen polymerase n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WKR6_VEREI Length = 415 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 54/404 (13%), Positives = 132/404 (32%), Gaps = 27/404 (6%) Query: 32 SMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSA 91 + ++A + A++ L +++ L++ + + ++W Sbjct: 15 AFMLAGLALWLPSGYSYGAALLLLTAVVSAPWWCRSPAPRAAWWLAL-VFACMAVLWMLD 73 Query: 92 FKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAM 151 + S K + I L + S + + + LI Y Sbjct: 74 MDATGD-----WGSMDRPLKYLLALPCIFCLMRFAPHASCLWTGIALGAAGGGLIGLYQT 128 Query: 152 YINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLAL 211 + + + + + ++ G++ V + +L L AL Sbjct: 129 QWQGLSRANGFTNAIQYGDLSLLLALMSGLLLLVQYRRWQPWQRWLLALAVLLGGVGSAL 188 Query: 212 TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALN 271 +Q+R L ++ + + + + +L +V+ + R+++A Sbjct: 189 SQSRGGWLALVLVLPVSAWLLARTIGPRRVCWGLCAL-LLGVVVLAQMPVVGQRFDQARQ 247 Query: 272 DLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGAL 330 ++ +Y + +S+G RLA + + + + P + + VA L Sbjct: 248 EVQTYREMGDDSSSVGQRLAHWRLAWEMGRERPLTGWGRTGYMQEKVRRVAAGLVRPSVL 307 Query: 331 EFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG---------------- 374 F H+HNE+++ +G+ G+ L Y + + + A Sbjct: 308 TF--GHVHNEVLDLFVKRGIFGVLLLLLFYGTALALFWPTAARIRDAAGKIDKEALSLCL 365 Query: 375 -LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + + L +G G + V + S + + L+L R + Sbjct: 366 VGVSMPLSYIGFGFTQVFLAHNSGNMFYLFMCPLVLAALQRRRS 409 >UniRef50_Q65W10 RfaL protein n=2 Tax=Pasteurellaceae RepID=Q65W10_MANSM Length = 419 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 59/402 (14%), Positives = 134/402 (33%), Gaps = 29/402 (7%) Query: 28 LCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLI 87 L F + + S + + + L+ +++ R+ + L S L L ++ Sbjct: 16 LFFIICLSVRSGYSISPILLALVGLGYLIYDLIKKRKWQISPDEKWLIYSYGLYFSLFVL 75 Query: 88 WYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIA 147 + + + +F F + + +++Y + S + Sbjct: 76 SLLIHQGRLKELDSPVKIVFLLTLLLLFSRFPIKFS----------TLIYAIPMGSMIAG 125 Query: 148 GYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSG----VAILYTKKNHPFLFLLNSC 203 A+ + M +G+ S + +K LL + Sbjct: 126 ITALIDRFYLHSQMAYAPRIMHIQGGDIAMSLGMFSLVCCIYFFIKQQKKWMLFCLLATL 185 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI-IFNKPI 262 + + L+ R + P + AY + F S++ ++ + + + I N I Sbjct: 186 SGMLGSILSTARGGWIGVPFVLCFIFWAYRKYLSRTFFVSVISILVVAVGVAVSIPNTKI 245 Query: 263 QNRYNEALNDLNSY---TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 R N A +D+ SY + TS+GAR M++ + + P E + Sbjct: 246 MKRINAAQHDITSYVDNKKGSDSTSVGARFEMWKSAFLMIKEKPVFGWGIEGVNQMRKEH 305 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK--------- 370 + + A +F+ H HN+ ++ S +G++G + L ++ K Sbjct: 306 QKQGIISKYASQFT--HAHNQYLDDFSKRGVLGFIALLAVFLVPMRFFRKNLSDRLEVKV 363 Query: 371 RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 A+ ++ + ++ S S I ++L + Sbjct: 364 VAIFGMVHVISVMFYCFSQGFFSHNSGNIFYFFPVILFYAVI 405 >UniRef50_C4KCH4 O-antigen polymerase n=1 Tax=Thauera sp. MZ1T RepID=C4KCH4_THASP Length = 439 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 54/392 (13%), Positives = 122/392 (31%), Gaps = 15/392 (3%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 L + L F+ S + T + LSL+ + Sbjct: 19 LHTVNSALVFWFFAFLITGPKNS----HATTALLALSLVTLPATVRVAPRVWAHAAPW-- 72 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 L+ L Y ++++ + ++ ++ I+F L+ Sbjct: 73 --LIGLGAYCSYQIAYRLIDGGLEARIDPPARYLGAIPILFYLARYGFN---IKALWAGM 127 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAI-LYTKKNHPFLFL 199 ++ LI G A E + + L+ ++ ++ + Sbjct: 128 AVGSLIGGVAGAQEVWIEGAQRAGAGIHPIAYGSILALLSMILLYGATIFRETTWRIFLS 187 Query: 200 LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFN 259 L + L+ TR + ++ + + L + + + Sbjct: 188 AAFAVGLTGVLLSGTRGLYAALAVCMAFIGYRALRQAGVSSRAVWLTAAFSLILTIAVAS 247 Query: 260 --KPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE-SRAESM 316 + R E + N TS+G RL M+ GL I + P + ++ ++ Sbjct: 248 QIPAVNERLQETQREYAEIYEGNLDTSIGHRLQMWHAGLFIISERPLFGLGPDVTKRQTA 307 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLL 376 E ++ + HLHN I + GL+G+ + L F + + Sbjct: 308 TQAFMEEHQYGPWVLRIYDHLHNLYINEAATFGLIGLTALAGLLFGALKGTFGPTRTMIN 367 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 + + I+ GL++ I+ + + + + +L Sbjct: 368 LTIMIILLEGLTETILNHHRLMMTFMILVTVL 399 >UniRef50_Q1LJU1 O-antigen polymerase n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LJU1_RALME Length = 413 Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats. Identities = 72/415 (17%), Positives = 141/415 (33%), Gaps = 28/415 (6%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 S+ +L + +L F ++ + ++ LL GR K + Sbjct: 3 DSNKLLSRMATVLVFAFPVLILCVPRGAGVFLAGVGVLALLGWRGMGRAWREYSKVMTP- 61 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 + + L + + F ++ N ++ + + + + Sbjct: 62 -----LAIAVLAFMLVYVGSKLYFHTPWNVIDNPSRTLLAILTCWVIV---RAAPNPAWL 113 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 + FL Y DR S + A A + +V ++ H Sbjct: 114 WRGITVGLFLALLIVGYQKFALNIDRPSAWIQ-AIAFANMIAALALVGFARPGDSRGTH- 171 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 +N +L L TR ++ + V L+ Y + + V +A LA Sbjct: 172 MEAWVNLLLGTMILMLNGTRGAVVAMLVTSVPMLMIRYRRFSVRMLIVAVCAVATLAIGA 231 Query: 256 IIFNK-PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 + P+ R ++A++++ Y N TS+G RL ++ IGL F + P++ A Sbjct: 232 YMVPDSPVSKRVDDAVSEIQMYRQGNIETSVGVRLKIWHIGLQYFSEHPWTGVGVGQFAR 291 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL- 373 ++ H A H HN+I+EA S G+ G+ L L+ + + Sbjct: 292 ILHASEFCHETKSLACVL--EHAHNDIVEAASTTGIPGLMVMLGLFLVPAVLFARALRAA 349 Query: 374 -------------GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 L + + + GL+ V + ++ + I LLL + R Sbjct: 350 RSLGNPQGVSLGGAGLGVVMASLISGLTQVTMAHQANVVFYAGLIGLLLGMAGRE 404 >UniRef50_D0Z1E7 O-antigen ligase n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z1E7_LISDA Length = 395 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 55/374 (14%), Positives = 129/374 (34%), Gaps = 15/374 (4%) Query: 45 KIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL--------IWYSAFKVDN 96 + + + ++ G + + + + ++ GL + +W Sbjct: 10 ILLPFIWLSTGMLILKNGDKTMVAMIIISIIATVCRYGLTSIKQNLSNKMLWLVIAIAAY 69 Query: 97 SPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSI 156 + F YH + I GS + L L +QL ++ + L L L +++ + I Sbjct: 70 TLFSYAYHGLSSRELRAIIGSLLFLLFLPTQLITQ--NRLIGLVVLGSIVSSLYAWYYGI 127 Query: 157 HENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRA 216 + S+ + + + A+ T K + + L + ++R Sbjct: 128 YLGLGRSWPMNPIPYSTLIVSFAIMSLSFALASTDKRVKVITTVCFSFSCLALIIGESRG 187 Query: 217 TLLLFPIICVAALIA-YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNS 275 L + I K+ I+ L+ ++ S+ I+ ++ R+ + + + Sbjct: 188 LWLALALTLFTFAIYSMIRFYQPKYWLYIMGLVILIGSMGIVLKPQLEARWQQTEQEYQA 247 Query: 276 YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV 335 N N TS+G RL M++ + P ++ + ++ L + + ++ Sbjct: 248 IQNGNMCTSIGLRLQMWQAASILVEDDPILGTG-DAHIQKLDELYHQGRIEKCLYQYQPA 306 Query: 336 HLHNEIIEAGSLKGLMGIFSTLFLYFSL---FYIAYKKRALGLLILTLGIVGIGLSDVII 392 H HN+ ++ G++G+ L L + LL + + L+DV + Sbjct: 307 HYHNQYLDRFVKNGVIGLILLLALLLCPITQIKKLNNTKQYILLGIITVYISASLTDVPL 366 Query: 393 WARSIPIIIISAIV 406 + I Sbjct: 367 NHGQTLFMYFFYIF 380 >UniRef50_C9P0H7 O-antigen ligase n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9P0H7_9VIBR Length = 389 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 67/382 (17%), Positives = 144/382 (37%), Gaps = 20/382 (5%) Query: 31 FSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYS 90 F ++I+ + T + + + ++ ++ I+R RQ N FL +L ++S Sbjct: 18 FLVLISIFNFTDTKSLVSRVTVIVIVYSIIRYRQCIKTNFNQYGYKKFFLASILVFSYFS 77 Query: 91 AFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYA 150 V + L +V+L++ K V T+ + + A Sbjct: 78 IMHVWRGDNFGLPRTLLT---------CLVYLSVVPWSKFSNSWVYNTIILSASVCGLNA 128 Query: 151 MYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLA 210 ++ + R+ A Y + + + Y + L + L+ L Sbjct: 129 IFEHYYLNIARVGIATNPIPYALYCSFVSLSSLALTKHYESRFIQGLCITGFLLSLWALI 188 Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEAL 270 LT +R + +PI + + Y + + + L++I + F I R + + Sbjct: 189 LTDSRGVWVAYPIAMMLVI--YRSFNNLSLVKLGTFTLIGLSAIYLSFKPMIDERVDRTV 246 Query: 271 NDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGAL 330 + NS + N TS GARL ++ G++++ + P +L ++ Sbjct: 247 AEFNSISKGNYETSFGARLDLWTFGVDVWKEQPMVGEG-------DIMLEEGIRKVPNRK 299 Query: 331 EFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI--AYKKRALGLLILTLGIVGIGLS 388 + +HLHN+ I+ + G +G F + +F + A ++ + +L + + GLS Sbjct: 300 AYRQLHLHNQYIDTLARYGSVGFFIMMVWFFYPVRLNKARERDRVITQVLVMLVFIAGLS 359 Query: 389 DVIIWARSIPIIIISAIVLLLV 410 DV + + + L + Sbjct: 360 DVPFHHTHVVYLFTLVVGLFSL 381 >UniRef50_A0KQV1 O-antigen polymerase n=5 Tax=Aeromonas RepID=A0KQV1_AERHH Length = 404 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 63/397 (15%), Positives = 137/397 (34%), Gaps = 21/397 (5%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 + + L +T I F + +A + + +T I LL+ + +++ IL Sbjct: 12 RITTALFGLTIIFSFCGLFLAPFGQSIQSNLLAVTGIFGLLNYFVGKQRDVGLKDRRIL- 70 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 + + + + R + +++ L K + Sbjct: 71 WGLLVYAAMIFVNRLIHGDQYGVMRGLF--------------YVLVFALMMPRKPSLLML 116 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 Y L + G H DR+ G A + + + + I++ + Sbjct: 117 GYLAIVLGGMGLGILSIWQYQHGIDRVE-GFTNAILFSQAALTLVILNWFVFQQERLPGW 175 Query: 196 FLF--LLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 L+ A L+ L L+Q+R L F +I +I Y ++ +L Sbjct: 176 LRGGSLVGLMAALFALYLSQSRGVWLAFGVILA-YVICYKAYFKPWKYVAVAMLCVASIG 234 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 ++ N+ +Q+R + A++DL + +S G R+ ++ F+ +P + Sbjct: 235 VIYHTNQLVQSRVHSAVSDLKLVEEGSYDSSWGLRVVAWQSAWLGFLDAPLAGVGTNGFD 294 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK--R 371 L H HN+ ++ ++G +G + + Y+A R Sbjct: 295 ALKRRQAESGVLSPSILSSELAHAHNQYMQNLVIRGSIGFIALVIFLGLPLYLAANNISR 354 Query: 372 ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 +++ L V LSDV + + + ++V + Sbjct: 355 ISAGVLVPLAFVINSLSDVPFEHQGVLYLYTLSLVFI 391 >UniRef50_B2KDP4 O-antigen polymerase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDP4_ELUMP Length = 737 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 60/420 (14%), Positives = 129/420 (30%), Gaps = 36/420 (8%) Query: 22 EIITYILCFFSMIIA-----FVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPL 76 +I + + F S+ + S+ + + + + ++ +N + + L Sbjct: 25 HVIGWAVFFISLSVYVRTYDIAAVKISLFFCALAVMFSVWASFKSLSEKPFNKQLFLSFL 84 Query: 77 SIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVL 136 L I + S +L F + + + +K S + Sbjct: 85 PFIFFALWLFISFIINPYKISSLEDFLKQFLYIFIPFFIATSFSLKEVGTVVKFLTASAV 144 Query: 137 YTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF 196 I G + + RI +G A + + + L + Sbjct: 145 ICFAYGFLQITGLDIMPWADFFGKRIFSALGNPNMFADFVIFMNFIVLALYLRKFEKK-- 202 Query: 197 LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 +LL A L L T+++ L F + V + Y P F I ++ ++ Sbjct: 203 -YLLLFAAGLVNLYFTESKGAWLSFGVTLVFFVFLYVKYFPSNFIKKHSKFIWVVGVVLA 261 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 + + + + S+ R + + + F+ S A Sbjct: 262 LASVILVVVFASKRMQ-----------SVDFRAITWRGIVQMSADKAFTGYGTGSFATVY 310 Query: 317 NLLVAEHNRLRGALEFSNV-HLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA--- 372 + + H NE +E + G++G+ L+L + +FY+A+KK Sbjct: 311 PTYRRAEIFYIEKIHNNETQHAENEFLEVLTDNGIIGLTLFLWLLYFVFYLAFKKFKELR 370 Query: 373 -------------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 L + I+ + DV + S + I L+LV++ + Sbjct: 371 LDPKSQGPPAYYLLAFVSAAAAILIHSIFDVSMRFVSTGFLFWVFIGLILVLSGYETVVR 430 >UniRef50_A6VLR5 O-antigen polymerase n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VLR5_ACTSZ Length = 415 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 60/399 (15%), Positives = 134/399 (33%), Gaps = 15/399 (3%) Query: 32 SMIIAFVDNTFSIKIYNITAIVCLLSL-ILRGRQENYNIKNLILPLSIFLIGLLDLIWYS 90 + AF+ F +K + A + L+ L + N ++ L L + Sbjct: 15 VLTAAFILTVFVLKPVHNAAFIALVLLGLAYSFTLLKNKQSFALTKEDKWFCYAVLFYII 74 Query: 91 AFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYA 150 + + +++ F L + + + F++A Y Sbjct: 75 VRLITFGFHDDRWRHVDVVSQLLAFLPTYFLLRKFKICLNALFIAIPCSAVIGFVVAAYD 134 Query: 151 MYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLA 210 + + A L + A+ +K L LL L Sbjct: 135 RLYLGLRLPFGNMIHIQAGDMALSLGWLSFPLFFYALKKKQKILTALCLLGILGGLGASV 194 Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI-IFNKPIQNRYNEA 269 L+ R + P + + + + + KKF + + L+ + A ++ I + R ++A Sbjct: 195 LSTARGGWISLPPVLLVLIYIFRQQLSKKFLAGLCTLVVVGAVVLFMIPQTQVSQRIHQA 254 Query: 270 LNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG 328 +D+ +Y N TS+GAR M++ L I + P + ++ E + Sbjct: 255 HSDIVNYFEKNNPNTSIGARFEMWKGALMIAQEHPLAGVGEDAFKTHFKRYATEGKMAKS 314 Query: 329 ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG----------LLIL 378 A + H HN +++ + G+ G+ S L ++F ++ ++ Sbjct: 315 ASIY--AHAHNLYLDSLAKNGIFGLLSLLLVFFVPLRKFWRTAKSADLNQKTIGALGVVH 372 Query: 379 TLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + ++ G+S+ + + +L + T Sbjct: 373 VVAVLFYGMSEAFFSLHATQMFYFFLAFVLYSMTESAQT 411 >UniRef50_A9IRJ0 Membrane protein resembling polysaccharide polymerases n=4 Tax=Bordetella RepID=A9IRJ0_BORPD Length = 419 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 140/358 (39%), Gaps = 20/358 (5%) Query: 79 FLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYT 138 + L A + NS + S + + V L + + V ++ Sbjct: 58 LSWMSVALATPLAVMLVNSAVLGIWSSSELEKLLRFALAIPVAWLLLRVPRRWLQQVQWS 117 Query: 139 LYSLSFLIAGYAMYINSIHENDRI----SFGVGTATGAAYSTMLIGIVSGVAILYTKKNH 194 L + ++ + I + R G A A T+ G+ S + + Sbjct: 118 LLAGAYAGSVMLFVIMLSPDLGRGAVSEYGGRYNAVAFADLTLFFGLASCLTLPGRLSRF 177 Query: 195 PFL----FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 L + L+ L+QTR+ L + V L+A + S + T+ + L A Sbjct: 178 SRLEAVLKIFVVPLSLWAAWLSQTRSCWALLVVFGVVLLLANRHWSLRAKTAFVAGLSAF 237 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 + + + ++R+ E +DL Y + + TS+G RL +++ +F + P + A Sbjct: 238 VVAGAVFAWHAKESRFAEVRHDLTRYEHQDRDTSVGIRLQLWQASWLMFKEKPLTGVGAP 297 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 + + L + + + HN+ + A ++ GL G+ S L LYF I +++ Sbjct: 298 NFRAELARLHDQGVVTK-LVATKFGEPHNDFLGALAMYGLPGLLSILALYFIPAAIFFRR 356 Query: 371 R----------ALGLLILTLGIVGIGLSDVIIWA-RSIPIIIISAIVLLLVINNRNNT 417 A L+ TLG L++++ + RS+PI ++ +VL + + R + Sbjct: 357 LGSSDPVTHMGAKLGLLFTLGYATFSLTEMMFRSMRSVPIYAVTVVVLFALSSERARS 414 >UniRef50_D0IMS5 O-antigen ligase n=11 Tax=Vibrio RepID=D0IMS5_9VIBR Length = 404 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 58/403 (14%), Positives = 135/403 (33%), Gaps = 23/403 (5%) Query: 17 SSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPL 76 S + ++ F + + +VCL +I G++ N + + Sbjct: 8 ISKLEAAFFISPLAILLMAIFNFPDTKFILSRLIPVVCLYGMIKYGKEIKDNYNSQLKSF 67 Query: 77 SIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVL 136 IF G++ + + A + + +L + + V Sbjct: 68 LIFGFGVVVVYSIYHVIRGDGFSLART-----------LITSLAYLIFVPWKRINPKVVC 116 Query: 137 YTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF 196 Y + + + A Y + R+ A Y + L+ + + K Sbjct: 117 YIIAIAAIVCGLNAFYERYVLNIYRVGIATNPIPYALYVSFLVLSCVYLLLNSQSKTLKL 176 Query: 197 LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 L + L + +T R +L P+ + +I K + +SI+ ++ L Sbjct: 177 LASIGGSLSLSAIIMTDVRGVILFLPVAIIYLVITTIKPIWKYYVASILSVMFFLGVFYT 236 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 IF I R + ++ +S+G RL ++ G++I ++P + + Sbjct: 237 IFQPEINARITQTQGEIALIKQGYLSSSIGVRLDLWMHGVDIIAQNPLFGVGDIGLQDRI 296 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR----- 371 + + + HLHN+ ++ + G++G +L + Sbjct: 297 SKMTNPGAATQ-------PHLHNQYLDFLARYGIVGTLVIFLFCLALIFNLNNSAFEYIG 349 Query: 372 ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 + + + ++ GL+DV + I ++ LL+ + + Sbjct: 350 NPLVNSMFMMLIFAGLTDVPLHHTHIVYLLTILCGLLIRFSEK 392 >UniRef50_Q2YBZ5 O-antigen polymerase n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YBZ5_NITMU Length = 431 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 67/395 (16%), Positives = 130/395 (32%), Gaps = 18/395 (4%) Query: 26 YILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLD 85 ++L FF + + + I + + +L R + ++ L + + + Sbjct: 25 FVLLFFGIALWSKWLSLGTGI--LLTFIWILDSGPRRLGQIIREPLVLGILLLCAVVAVG 82 Query: 86 LIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFL 145 L+W + +R + L + L T Y + L Sbjct: 83 LLWADYPEAGRMKWRRYFG---------FLVFIPFLSLLNRHRLPWAIAGLLTGYIIVLL 133 Query: 146 IAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAV 205 Y ++ + ++ + +++ + AI + L S + Sbjct: 134 SGVYQWAVSGVQGIPPLNISYLVFSSLLGIGVILLLYLATAIGEI--KWKCVLGLGSLFL 191 Query: 206 LYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNR 265 L + R LL + + Y K+ +K I+ + I+ ++++ + Q R Sbjct: 192 LLIQFGQYGRGPLLATLLAVFLMVFLTY-KTERKALLGIIASLTIVVAVLVYGSNSFQAR 250 Query: 266 YNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNR 325 + + TSLG RLAM+++GL+ ++ PF VA + Sbjct: 251 LEQVEVEAKLSQQGKYDTSLGYRLAMWDVGLHGILEHPFFGHGTGMPESYFEKTVATYKG 310 Query: 326 LRG---ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGL-LILTLG 381 H HN+ IE G G +GI + F +S F R L L Sbjct: 311 GIYRDLPQYVGASHYHNDWIEIGMHTGALGILAYGFFLWSWFQTLRAHRLPVLGAALVFF 370 Query: 382 IVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 I GL+D IP ++ + + N Sbjct: 371 IFLSGLTDTFALYSKIPTFLVVITAIAIAWQKEGN 405 >UniRef50_C8SG72 O-antigen polymerase n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SG72_9RHIZ Length = 459 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 61/396 (15%), Positives = 141/396 (35%), Gaps = 26/396 (6%) Query: 27 ILCFFSMIIAFVDNTFSI---KIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 I +FS++ F ++N + +L + L+ R+ N + + L + + Sbjct: 16 INIYFSILCFFFPPVLGSVVSFVFNGGGLSSVLLIALKKRRFNVDPAMMALTAAFYAYCA 75 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 +L + I + + T + K+ ++ + Sbjct: 76 ANL------AASIVNNAIARDASHLIPLITFLFFPVSYSTWSITQKTTLVRIIVLCSMAA 129 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC 203 A R G G A A L +V L + H + + Sbjct: 130 CFAALLLAAFQQYRLGIRAEGGAGNAIVFAEVLCLAVMVCVAGALSGVERHRIALICAAL 189 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSP-KKFTSSIVLLIAILASIVIIFNKPI 262 + + TR + I +A L+ ++ + +++++A+ I + I Sbjct: 190 GGTIAIVYSGTRIIWVALLIAGIAVLLINQHRVRGRNVVRLLLMVVAVGIVIAAFGFQTI 249 Query: 263 QNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 R + +DL++ ++ + TS+G R+A+++IGL F + P + LL++ Sbjct: 250 SGRLDFLRSDLSALGSHGDYNTSVGIRVALWQIGLKAFREMPLLGHGVG----ATQLLIS 305 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY-----------KK 370 + + AL H HN + A G++G + ++ A + Sbjct: 306 HGFQNQFALSLGFNHFHNGFLTALVQAGILGAVALAAIFVVAARNAALVLRNSSDPIERF 365 Query: 371 RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIV 406 A ++I + + G++ ++I + +++ +V Sbjct: 366 GATMIVIAVITYLCAGMTGILIGHDILDSVLMVFLV 401 >UniRef50_B8K678 Putative O-antigen ligase n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K678_VIBPA Length = 392 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 119/312 (38%), Gaps = 5/312 (1%) Query: 108 NTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVG 167 + ++ I S +VFL + +K K + S + Y ++ + + DRI + V Sbjct: 82 SILRVLIATSLLVFLPQDNVVKFVKTHLANLTPLASLISIAYVIHQSYYLQLDRIEWSVN 141 Query: 168 TATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVA 227 + + I + + + + +++TR TL+ F + Sbjct: 142 PIPYTTMVSAIAIISFYYMVSPYNFRIKIANTVGLFLSVTGILISETRGTLVAFIAALLI 201 Query: 228 ALIAY--YNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSL 285 + ++ K + + ++ + I+ RY + ++ N N TS+ Sbjct: 202 LSLFRLDFSTLKHKGIKYFTIASIAILTLFFVNKDTIKPRYERTVFEVQQILNGNYSTSI 261 Query: 286 GARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAG 345 G RL M++ GL + +S + L E+ + A+++ H HN+ I + Sbjct: 262 GLRLHMWQAGLELAKHPTLIGLG-DSHIDEKKKLAEENLIHQSAVKWR--HYHNDYITSW 318 Query: 346 SLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAI 405 +G++G L + FY + R+ I +L V + S +I I Sbjct: 319 VKRGVVGFVFLLVMLSFPFYYFIRYRSEETTIASLVGVIYVVGSFTDIPLSQANSLILYI 378 Query: 406 VLLLVINNRNNT 417 +L++V+ + T Sbjct: 379 ILMIVLCSPKRT 390 >UniRef50_B4AYT6 O-antigen polymerase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AYT6_9CHRO Length = 857 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 59/428 (13%), Positives = 136/428 (31%), Gaps = 20/428 (4%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNI----TAIVCLL 56 M+ SF S K + ++ IL F+ + + + ++ + Sbjct: 1 MIDSFASKSSDAVIWKGQWLGWLVLGILVLFTWLPNNYYLVVAWPWIVVWQTGFLLLGVW 60 Query: 57 SLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFG 116 + + + + + + LI + F A ++ + + Sbjct: 61 LIWMLRQFQIPFRCVGYGFDGFVVWTAITLILSAIF--SQFVGVAAWNVSIGIYYGVLLY 118 Query: 117 SFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYST 176 +L S+ L ++ +I + N E+ R + +G A Sbjct: 119 VLRNWLGKGQLSLSRLWIGLSFTGVIASVIGLMVWWQNYTPEDPRNGWPIGHPNFLAGYL 178 Query: 177 MLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKS 236 +L+ ++ + K S +L+VL T +R L ++ V +++ + +S Sbjct: 179 LLVLPLTFYWGVDQKGWRRLAAWGASLLLLFVLYTTSSRGGFLGLFVLIVVSILFWLLQS 238 Query: 237 P---KKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYE 293 + +V + + ++++ N +Q + + RL M+ Sbjct: 239 HPSQRIRRLLMVGVALVAVVVILLSNPRVQQIIHLSSPQNTPAVQVTVDGESQERLYMWR 298 Query: 294 IGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGI 353 IF P + A +L G L + LH+ I GLMG+ Sbjct: 299 SAWQIFKAHPLLGIGPGNMARVYDLYR---PVEAGLLLINLQELHSTPIHITGELGLMGL 355 Query: 354 FSTLFLYFSLFYIAYK--------KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAI 405 + L + + K L + ++ +S + + I ++ I Sbjct: 356 AAYLLFLGCCTRLWIRLYRHCTEPKNRYLLYGIGSSLLAYTVSSLTDYQLDNIAICVTLI 415 Query: 406 VLLLVINN 413 L+ ++ Sbjct: 416 ALIALLIR 423 >UniRef50_B5JVL1 O-Antigen Polymerase family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVL1_9GAMM Length = 308 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 111/297 (37%), Gaps = 19/297 (6%) Query: 135 VLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH 194 + + + I + + + + GV A +++G +S +++ + Sbjct: 8 AILSGFHALCEIFQWTFFGDQFSRKTWRADGVVNAIYFGNIALMLGTISAISLYQNWQEK 67 Query: 195 PFLFLLNSC----AVLYVLALTQTRATLLLFPII--CVAALIAYYNKSPKKFTSSIVLLI 248 ++++ + + L+ +R L I+ ++ K F S++L+ Sbjct: 68 KWIWVFFAVNGATFGIIGSVLSLSRGGWLAGLILTSLFFFILLIKGKVKLLFLFSLLLVS 127 Query: 249 AILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRS 308 A+ AS ++ R+ +++ + NS TS+G RL M+ + +SPF Sbjct: 128 ALFASYFFSHEGMLKKRFQNTYENISQFDPKNSETSIGYRLRMWLQAIENIKESPFFGSG 187 Query: 309 AESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY 368 +S A + ++E H HN+ + S G+ G +FLY Sbjct: 188 PDSFA-----FINPDPDPSLSIESEYYHAHNDYLNTLSNTGITGFIPLVFLYSMPLLYFT 242 Query: 369 K--------KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + + L + + L+DV+ + I + I L +++ + N + Sbjct: 243 RKLFFSTSHQWPLSGACIVVLYACFSLTDVMFYRSVGTIYFLLLIPLFMILCDHNKS 299 >UniRef50_Q1ZLP1 RfaL protein n=2 Tax=Photobacterium RepID=Q1ZLP1_PHOAS Length = 423 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 61/408 (14%), Positives = 141/408 (34%), Gaps = 29/408 (7%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 I+ + + K YN+ I+ L++ + Q N + + G+ L Sbjct: 11 IIISLLVASFPILCLAYGKGYNLPPILLLVTALGFCWQFNKINYTTQVKWVLGSFGIYFL 70 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 + + ++ ++I + + + L + S ++ ++ Sbjct: 71 ----TYLASTLYYGGSFAEIDMPSRIVLVLPIFLLMLLYPPKINILTSGFIIGSIIAGVV 126 Query: 147 AGYAMY-------INSIHENDRISFGVGTATGAAYSTMLIGIVSG----VAILYTKKNHP 195 A +Y + ++++ S + M +G++S + Sbjct: 127 AMIHIYDFKTGRAFSDLYKSIHPSLKGYMPIQSGNMAMTLGVISLTISLYYLDQKSWWKF 186 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 L L+ + +Y L+ +R + PI + L + K + +++ A Sbjct: 187 TLSLIAALLGIYASFLSGSRGGWIFLPIA-IIYLAFSNRQFISKKIAIFSIVVLGTAVFS 245 Query: 256 IIFNKPIQNRYNEALNDLNSYTNA-NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 + N I+ R NEA ++ Y + +SLG R +++ + + P + R Sbjct: 246 LSQNTEIETRLNEATQEIVQYQKGHDENSSLGVRFELWKSAIYTTEQHPIFGSGYQGREV 305 Query: 315 SMNLLVAEHNRLRGAL-EFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL 373 + + E+ + H HN+ +E S++G++G+ + L ++ I + Sbjct: 306 LREKWAHDGLVNAQVIKEYLHSHSHNQFLEDLSVRGVIGLTALLAIFIIPLGIFITNHRI 365 Query: 374 G-----------LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 I + ++G LS + S I V+LL Sbjct: 366 ANSPQQKMINQCGAISVIMMIGYCLSQAMFRHNSGIIFYSLITVILLA 413 >UniRef50_B5YEZ0 Tetratricopeptide repeat domain protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YEZ0_DICT6 Length = 867 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 52/439 (11%), Positives = 136/439 (30%), Gaps = 34/439 (7%) Query: 7 LHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQEN 66 L + MI + F + ++ + L ++ + ++ Sbjct: 17 YFRLFVFAFLLLMIFLVPIAQPSFLKLHDISEIPKVTLIRVLTGFALLLWAIWVYVSRKE 76 Query: 67 YNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTS 126 N+ ++ S+FL + +I F +Y + F + L Sbjct: 77 LNLPPKVISASVFLFLISWIISTIFSTNFYLSFFGSYMRQMGFLTYFFYFVIFFLLYNVV 136 Query: 127 QLKSKKESVLYTLYSLSFLIAGYAMYINSIHEN--------DRISFGVGTATGAA-YSTM 177 + ++ + +T++ + ++ + + RI +G A + M Sbjct: 137 ENYTELKYFYWTVFITTVIVDFFGILQLYRLMPWYERVRTESRIIATLGHADFLGHFLVM 196 Query: 178 LIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNK-- 235 ++ I+ L + A VL + TR + + F + + K Sbjct: 197 VMPIILSFIYYVKNNVLRVLLYVLFLASFLVLLGSYTRGSWVAFLAGIIIYYVFVLWKEK 256 Query: 236 ---SPKKFTSSIVLLIAILASIVIIFNKPIQNRYN-------EALNDLNSYTNANSVTSL 285 + K ++ L++ + ++ I + + S VT Sbjct: 257 GFFTKKNKIITLALVLGLALTVGIFYITENKLYIEKKDVGLFSLKERFESIGAGLRVTQQ 316 Query: 286 GARLAMYEIGLNIFIK------SPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHN 339 R+ + + +F E+ + + + + HN Sbjct: 317 NPRILTWRDSIRLFEDKILKSPRIIYGLGPETFSFNFTPYKSLDLARYDGGKGYPDREHN 376 Query: 340 EIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR-------ALGLLILTLGIVGIGLSDVII 392 E ++ +GL+G+ S +F+ S+F + K + L +G + + +++ Sbjct: 377 EFLDILFPQGLLGLLSFIFVLLSVFLYSIKNYNKIGAENRILFLGTLIGWLSFLIQGLVL 436 Query: 393 WARSIPIIIISAIVLLLVI 411 + S + + +++ Sbjct: 437 FGLSATYLYFWMLTSFIML 455 >UniRef50_Q1PVJ3 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVJ3_9BACT Length = 943 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 58/454 (12%), Positives = 149/454 (32%), Gaps = 59/454 (12%) Query: 19 MILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCL-LSLILRGRQENYNIKNLILPLS 77 ++L + I FF + + V + + + +I L + IL + +++ ++ + Sbjct: 19 LLLAAVVIIPLFFDIRLYSVFDLSKVAVLYFFSIATLVIWTILLTVKHDFSFSHVSINTP 78 Query: 78 IFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLY 137 I + +I + TY + A + +++ +L Sbjct: 79 ILAYIAIFIIATTVSINPVMSLFGTYKRFEGLAATLCYIFLFYVTIHFITTRTRLYMLLI 138 Query: 138 TLYSLSFLIAGYAM-------YINSIHENDRISFGVGTATGAAYSTMLIG--IVSGVAIL 188 ++ + + + Y + Y R+ G A +++ +VS I Sbjct: 139 SMAVCALISSIYGIFQRCGVDYFTWSSSGPRVFSTFGNPVFFAAQLVMVLPVVVSLFFIG 198 Query: 189 YTKKNHP-----------FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP 237 + +K + F + S + LT TRA + V L + K Sbjct: 199 FKEKEGKDGIFINNRYAIWSFYVVSVIIYIAFWLTNTRACFVALLGGIVPFLFFIFIKRS 258 Query: 238 KKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANS---------------- 281 + ++L+++ + KP + D+ + +++ Sbjct: 259 TERYPFLILVVSFFIIGIFFNVKPETSFIKHFAADVQNEKDSSDFFIDKEAEEKSISRKP 318 Query: 282 ----------VTSLGARLAMYEIGLNIFIKSPFSFRSAES----RAESMNLLVAEHNRLR 327 S +R+ Y + I P ++ +++ + + Sbjct: 319 RPWIAGKFSVTGSSFSRIFQYLAAVEIIKDYPALGIGPDTIGIVFQKNLAKVFSVLEEDN 378 Query: 328 GALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSL-------FYIAYKKRALGLLILTL 380 G +HN+I++ +G++G+ + ++L + + + + +L L+ Sbjct: 379 GFQFPRQDRIHNDILDTAVTRGILGLGTYVWLLTAFGVYVGRNYRRLNNRDKILILGLSS 438 Query: 381 GIVGIGLSDVIIWARS-IPIIIISAIVLLLVINN 413 GIV + + + + I + + L + I Sbjct: 439 GIVCYLIQNQFSFGNTPIVTLFWVMMGLCISIIK 472 >UniRef50_Q9CJX6 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CJX6_PASMU Length = 257 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 93/255 (36%), Gaps = 15/255 (5%) Query: 175 STMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYN 234 + ++ + + ++ + + L+ R + P++ AL AY Sbjct: 3 LGLFSFVIGLHSFSRQQYRQMLWAIIATLFGILGSVLSTARGGWIGLPLLLCFALFAYRQ 62 Query: 235 K-SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYT--NANSVTSLGARLAM 291 S K + + +LA++ + +R EA + Y A TS+GAR A+ Sbjct: 63 YLSKKILFFVSLFFVFLLAAVAFAPKTKLISRVTEAYTETQQYFDAQAEQSTSIGARFAL 122 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 ++ L + + P E + E A F+ H HN+ ++ S GL+ Sbjct: 123 WKSALLMAKEKPLLGWGNAGAMEKRQVQQQEGMISEYAANFT--HAHNQYLDNLSKYGLV 180 Query: 352 GIFSTLFLYFSLFYIAYKKR----------ALGLLILTLGIVGIGLSDVIIWARSIPIII 401 G+ + L ++ F Y+KR A ++ + ++ L+ + S I Sbjct: 181 GLVALLAIFSVPFCYFYRKRHAIKGEEKLVATLGMLHIISVMCYSLTQAFLNHNSGNIFY 240 Query: 402 ISAIVLLLVINNRNN 416 ++ + + Sbjct: 241 FLSVFIFYGCLKHSE 255 >UniRef50_A6FBF0 Putative O-antigen ligase n=1 Tax=Moritella sp. PE36 RepID=A6FBF0_9GAMM Length = 386 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 57/394 (14%), Positives = 135/394 (34%), Gaps = 21/394 (5%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 K L ++ +I F +++ + I I+ LL ++N + L L Sbjct: 4 KLYNALILMPFIWAFSGLLLFRNGDKLMIVAILISITATLLHYGFDSIKQNLRDRGLWLI 63 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 ++ + + ++ + + L +I + K + Sbjct: 64 FTLTIYAVFSYYYHGSSSREMRALLGAMLLLLTFPRILL----------------SKYHL 107 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 + + S ++ Y++ + R+ + + A ++ + + + + Sbjct: 108 KWLVALGSTVVLSSTYYLSEYLQIHRVDWPLNAIPHATIGAVIAIVTLVLLLDEKNNRNK 167 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 + L + L + QTR L I + L + +++ + IL+ V Sbjct: 168 MMLSLCFSLSIAALLINQTRGIWLSVVIAAILILFLKVKIKHINWRYTLI-TLVILSIGV 226 Query: 256 IIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES 315 + IQ R ++ ++ + + +S+G RL ++ I + + P E Sbjct: 227 YVAKPQIQQRIDKTSTEIVQIKSGDFTSSIGIRLELWMISPEVIAERPILGHGNGD-QEK 285 Query: 316 MNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK-RALG 374 +N +VA + +EF H HN+ I+ G++ + L L Sbjct: 286 LNEIVARGGVYKRLVEFK--HYHNQYIDRLVSGGIVSLILLLALLTYPLLFLLPGVNQQI 343 Query: 375 LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 + +++ GL+DV + + + I L Sbjct: 344 GIGISIVYATAGLTDVPFNHGATLFMYLLLIFTL 377 >UniRef50_D2EQE8 Putative licD2 protein n=1 Tax=Streptococcus sp. M143 RepID=D2EQE8_9STRE Length = 719 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 53/433 (12%), Positives = 129/433 (29%), Gaps = 40/433 (9%) Query: 24 ITYILCFFSMI-IAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIG 82 I Y+ F S++ ++ + + IY + + +L + + I L +F + Sbjct: 17 IAYLFVFISILSMSSLVYKVANPIYKGLSAIVVLYICYTLLFKWKQITVDRKFLVLFGLL 76 Query: 83 LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSF----IVFLTLTSQLKSKKESVLYT 138 + + F + +F + L + S Sbjct: 77 SGSHLLSAVFNRSGHLIGNVIEILFMVTYVLLFTMLQSGQLKKLFDWIAYTVQIISFSSA 136 Query: 139 LYSLSFLIAGYAMY-----INSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193 +++ L++ + + + A+ I I+ + +++ Sbjct: 137 IFAFGLLVSRVLILFKIGEQSYYYGVMNGRLWGIVNPNASAIFSYISIILAMYLIHKGSK 196 Query: 194 HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 + LN+ L A Q+R LL ++ S K + +++ ++++ Sbjct: 197 YSVYLKLNNVIQLVYFATMQSRGALLSLLLMIGLYSFFATRGSIVKRFLTFIVVGLLVSA 256 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANS------------------VTSLGARLAMYEIG 295 I + + + S T+ R +++ Sbjct: 257 TNIGLSYVTSIYISSETATVFDLNKGQSYAETDSSVTKKTGELHLIETTPSGRTYIWKNA 316 Query: 296 LNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFS 355 + + P + + ++ + + HN + G++G+ S Sbjct: 317 IKMGSAKPIFGYGVRNVPDYYTEYFSKFEIQNSLIG---GNFHNIFVTIFVSSGVLGLVS 373 Query: 356 TLFLYFSLFYIAY------KKRALGLLILTLGIVGIGL---SDVIIWARSIPIIIISAIV 406 L + + KK L+++ + G S ++ I II AI Sbjct: 374 FLLILGYVIKRFLTYLIVSKKNTDKLIMILFFGILFGQLFESQIMYSTNFINIIFWLAIG 433 Query: 407 LLLVINNRNNTIN 419 LV+ R+ I Sbjct: 434 YGLVVCKRDEGIR 446 >UniRef50_B9MAP4 O-antigen polymerase n=2 Tax=Comamonadaceae RepID=B9MAP4_DIAST Length = 444 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 62/406 (15%), Positives = 149/406 (36%), Gaps = 34/406 (8%) Query: 26 YILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLD 85 + + + + A + LL+L ++ ++ + +L + + + L Sbjct: 10 WGGSLSAFLFFSLSLIVPSGYSYGAAALALLALAGCLQKGSHGVASLDTKILLASLCLTG 69 Query: 86 LIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFL 145 ++W + F S AK + L+ +V++ + + + Sbjct: 70 MLWTAPFDRAWS-----ISGLGIGAKYAFAALTLWALSQRV---LSPHAVVWGVAAGAVG 121 Query: 146 IAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC-- 203 G A Y + + G A M +GI + + + + L C Sbjct: 122 ALGIAAYQYLVLHWVKAQ-GFTNAIEYGGIAMYMGIAAWAMAMLGRWRWHQIAALGICGA 180 Query: 204 AVLYVLALTQTRATLLLFPIICV-AALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPI 262 + L+++R + + P++ L+A+ N + +++I ++ A++V+ K Sbjct: 181 CGVLASLLSESRGSWVTVPLLLAAIWLMAWRNGYRRIASAAIAAMLIGGAALVLPAYKKF 240 Query: 263 QNRYNEALNDLNSY---TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 + R + A+ + Y + TS+G RL + + +++ + P + + ++ + Sbjct: 241 EQRADLAVQEARHYLAEPQKYAETSIGQRLEQWRLAVDLIEERPVAGWGLDGYPKAKQAM 300 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGL---- 375 V + +++ H HNEI++ +GL+G+ LF Y + Y+ + Sbjct: 301 VDKGAAHPSVMQY--GHAHNEILDMWVKRGLIGLLILLFFYAAPLYVFWPTPRRLARVDT 358 Query: 376 -------------LILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 +L L G G + V S + I ++ + Sbjct: 359 TLQPRLLALRAAAALLPLAYFGFGWTQVFFAHNSGQMFYIFSLAIF 404 >UniRef50_B7VTJ0 Putative O-antigen ligase n=2 Tax=Vibrio RepID=B7VTJ0_VIBSL Length = 392 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 63/403 (15%), Positives = 130/403 (32%), Gaps = 17/403 (4%) Query: 17 SSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNL--IL 74 ++ +++ I L F ++ V K + L R+ Sbjct: 5 NTNLIQKILITLPLFWIVTVQVWLGQGNKPLAAITLFIAACCALLYRKNKEKHDWFEDGW 64 Query: 75 PLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKES 134 + L+ + ++ Y + RAT +VF K Sbjct: 65 VWILLLLSVFAVVSYELHGFSSQELRATLIG-------------LVFFLFYRNGFVKLSD 111 Query: 135 VLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH 194 + ++ Y DR S A+ + ++ + + + Sbjct: 112 IQNLCFTSVVSTTVLVAYYIFFLSGDRGSLTSNALIFASIQGFAVVLLLALGCISYEGKR 171 Query: 195 PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASI 254 P + + L +R LL II + L + + + + + + Sbjct: 172 PKTMATLAFIGFLSMFLVGSRGPLLAVIIIGLVVLFKMMMQHRQYKALLGISAMVVFSVF 231 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 ++ + R + +L++ + + N TS+G RL MY+ G + F+ SP + A+ Sbjct: 232 LMSKYDVVSERIDYSLHEYHQISQGNMDTSVGLRLQMYQAGFDFFVNSPLLGIGGDKEAQ 291 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG 374 L G N HLHN I+ + GL+GI + + + K + Sbjct: 292 LDKLSFT--PTNSGKRFIVNAHLHNNYIDKAASSGLVGIALLILSLMYPLFNSRYKLSPI 349 Query: 375 LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 +L+ + + L D + ++ I +LL + R Sbjct: 350 VLLPVVYFSLMCLFDSPFRNGDLAVMYFVFIGVLLKLQVRTEA 392 >UniRef50_UPI0001BCF229 O-antigen polymerase n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCF229 Length = 312 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 100/297 (33%), Gaps = 29/297 (9%) Query: 134 SVLYTLYSLSFLIAGYAMYINSIHEND--RISFGVGTATGAA-YSTMLIGIVSGVAILYT 190 + ++ S I ++ R + V + T A + M I ++ + Sbjct: 2 RAIILAFAASVCINDITAFVQLGIHGMEWRPTGLVHSPTFLASHLLMAIPVLCFFSQQSY 61 Query: 191 KKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 K+ L + +L LTQTR L ++ + L+ + Sbjct: 62 MKHFQRPLLALALLSGVLLLLTQTRGAWLAAAGTSALLFALTPQL--RRVLLAAALIGTL 119 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 L S VI+F+ +R + S R+ M++ L+IF P + Sbjct: 120 LLSAVILFSPTYSSRLISI--------SDTGYASNQERIYMWQAALDIFRDHPILGVGMD 171 Query: 311 SRAESMN-----LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY 365 N E R + H HN ++ S G+ G + L L+ LFY Sbjct: 172 EYGYYYNTAYIPDAARERPRDPDDPSTGHGHPHNNFLKHLSEGGIFGAVAFLLLHGYLFY 231 Query: 366 IAYKK-----------RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 Y++ AL +++ GI GL+D I SI + L+L Sbjct: 232 RLYQQFHEERRQRTPAYALMGILVFAGIHLEGLTDTNINQLSIAREYWLLMGLILAS 288 >UniRef50_C9P8T9 RfaL protein n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P8T9_VIBME Length = 423 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 61/414 (14%), Positives = 138/414 (33%), Gaps = 35/414 (8%) Query: 22 EIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLI 81 +I+ +LC F + + ++ + L ++ + +I+ ++ Sbjct: 11 NLISLVLCSFPVFCLALGKGYNYPAILLLITSLLTC-SYWVKKATFTRPVIIISITFIAY 69 Query: 82 GLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYS 141 L+ + + S F + L + + + + Y+L Sbjct: 70 FASYLLSWFVYDGKLSDLDQASR----------FILVLPILFMLIHFRIRSQWFFYSLCI 119 Query: 142 LSFLIAGYAMYINSIHENDRISFGVG--------TATGAAYSTMLIGIVSGVAILYTKKN 193 + + ++ + R G + M +G ++ Y K Sbjct: 120 GAIIAGIISIIHVYHMDFSRAFTGQNSHWWLRGYMPIQSGNMAMTLGFLALAISFYALKT 179 Query: 194 HPFLFLLNSCAVLY----VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIA 249 F L+ S + L+ +R + P + + L A + KK I ++ Sbjct: 180 RQFTLLIVSLLGSFGGVLASFLSGSRGAWIAVPFVLLYLLWANKSLLNKKIIVIISVITI 239 Query: 250 ILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSA 309 ++ I +Q+R A++++ Y N +SLG R +++ L F SP Sbjct: 240 -GIALTISSIDRVQDRVATAVHEIQQYEQDNRYSSLGIRFELWKNALLTFKTSPLIGVGE 298 Query: 310 ESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA-- 367 R + + H HN+ +E S++GL+G+ + L L+ ++ Sbjct: 299 VERYTLQKIHGDQGLIDYKVAHNFFSHAHNQYLEDLSIRGLVGLTALLALFLIPLKLSAS 358 Query: 368 ---------YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 ++ + +++ L + L+ + S I V LL + Sbjct: 359 RYVNPRNPKHQLVSQLVIVHILLFIFYQLTQAMFSHNSGTIFFSVMTVALLSLV 412 >UniRef50_Q7NZV1 Probable O-antigen ligase; lipopolysaccharide core biosynthesis n=1 Tax=Chromobacterium violaceum RepID=Q7NZV1_CHRVO Length = 429 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 81/397 (20%), Positives = 158/397 (39%), Gaps = 11/397 (2%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 + +L ++ I +++ L + + + NL+L ++ + Sbjct: 25 LALLLGCCLILTLPASGRTLFYILCSLSLLFLPLAMFQRLEAKPKALNLLLSFALLIFIG 84 Query: 84 LDLIWYSAFKVD-NSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSL 142 W F ++ +Y + KI++ ++ L S + + TL + Sbjct: 85 FRAAWLWYFPAPTDAGLFPVAFAYQLSNKIWLSALPLLLFPLWSPFRERLSPAGATLALV 144 Query: 143 SFLIAGYAMYINSIH--ENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL 200 S + + + + R+ G ATGAAY I + + + L Sbjct: 145 SASALLSMITLKAWYDAHGVRVGLGSLYATGAAYLLSAIHFFALLLFHPFRLKKWQWLGL 204 Query: 201 NSCAVL--YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIF 258 L + T TRA LL++ + AL+ + T +I L+++ + + + Sbjct: 205 CLLIALQFMSIVATGTRAALLVYLFVLGCALLWRFGLHQSWRTYAIAALLSV--ATLWLS 262 Query: 259 NKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNL 318 + +R +A DL +Y+ N+ TSLG R ++++ G++ + P+ +S ++R + Sbjct: 263 WAAVGSRVKQAQADLIAYSQGNADTSLGIRFSLWDAGVHAVREQPW-GQSIQARDVLFHQ 321 Query: 319 LVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK---RALGL 375 LV + + AL +VHLHNE +E SL+GL G S L +K+ Sbjct: 322 LVKDGALNKAALIMRDVHLHNEWLEILSLQGLPGALSWLIFLLGFGVYGWKRGGFFRRFA 381 Query: 376 LILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 L + GLSDV++ + I + L L + Sbjct: 382 LFYIGFWLVFGLSDVLLLSPQIAMFGAMFAALGLYLA 418 >UniRef50_C4L785 O-antigen polymerase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L785_TOLAT Length = 416 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 59/357 (16%), Positives = 135/357 (37%), Gaps = 21/357 (5%) Query: 79 FLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYT 138 +L+ + LI+ + T + +K+ + + ++F + L Sbjct: 60 WLLFAILLIYPLVHGLSILTDGGTIKEFDRPSKVIMGAAILLFCLRN----PPRFKWLML 115 Query: 139 LYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYT----KKNH 194 + + AG + + +F +M +G++S ++++ K Sbjct: 116 GIATGAITAGSRALFDRLVTGYGRAFEWMVPIQGGDISMTLGLLSLCGVMWSIKTANKGL 175 Query: 195 PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASI 254 F L S + L+ +R +LFP+I + + K + L + +L + Sbjct: 176 IVYFALASILGVLGSILSGSRGGWVLFPVILFVIYRIFKDWFSPKVKLGMGLALCLLVAF 235 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNA-NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 + + R A +D++ Y + N TSLG R +++ ++ F++ P Sbjct: 236 CLTPQSGVPTRIAAAKSDISLYLSGQNKNTSLGHRFEIWKSSVDSFLEKPLFGWGYHGVR 295 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY----- 368 +S + + A +F++ H HN+ ++ + +G++G+ + L L Y+ Sbjct: 296 QSQEQQYKQGLITKEAYDFNS-HAHNQFLDEMAKRGIIGLGALLALLLIPLYLFKQYLNQ 354 Query: 369 ------KKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 + A +I+ L + LS ++ S + ++I+ L IN Sbjct: 355 SFTPETRTLAAAGVIVVLSTIDYSLSQAFLYHSSGIVFYCASIIFLYSAVRSQQPIN 411 >UniRef50_Q474P4 O-antigen polymerase n=1 Tax=Ralstonia eutropha JMP134 RepID=Q474P4_RALEJ Length = 430 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 69/416 (16%), Positives = 149/416 (35%), Gaps = 21/416 (5%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 K ++ + + L IA + I + I+ + ++ +R + + L+ Sbjct: 12 KRKLLFQSLVSALLLAYPAIALFVHNAGNAILFLLLILSVTAMTIRLQPDGVGFGELLKA 71 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 + + N + + + + + VF L + + Sbjct: 72 YWPLHLAMAS---GCLAIFINQLWTGEFAARDYDRALRLAIFPFVFWILFFVPIRHLKLL 128 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTK---K 192 ++ + + + A + + + G + + +L G++ V+ + + K Sbjct: 129 QWSFLAAAVIAMAKAYIFTNGGDVRDGNIGFISIIAYSDIALLAGVLCVVSFGWNEGKLK 188 Query: 193 NHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILA 252 + +L A LY LT TR + L P+ + L + +K+ V ++ Sbjct: 189 LVLLVKILACVAGLYTSVLTATRGSWLAIPLFLIFFLFFARLEVRRKWL--WVASFVVVV 246 Query: 253 SIVIIFNKPIQNRYNEALNDLNSYTN-ANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES 311 +++ N+ NR+ + +DL +Y++ TS G RL ++ L + + P E+ Sbjct: 247 GLMLTLNQNAANRFLDTQSDLAAYSHGGGKSTSTGHRLQLWGAALTLIAREPVFGIGREN 306 Query: 312 RAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA---- 367 S+ + + F H HNEI+ + + G+ G+ S L LY Y Sbjct: 307 YDSSIKEMARKKEITGELTRF--AHSHNEILFSTVVSGVFGLLSALALYLVPGYFFAREL 364 Query: 368 ------YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + A L +G GL+D++ + + I LV R+ Sbjct: 365 SNTAPDIRTAARMGCALVIGFFSFGLTDLMFFWPVLGGYYSIMIGAFLVFIIRSKA 420 >UniRef50_A1W2G4 O-antigen polymerase n=3 Tax=Acidovorax RepID=A1W2G4_ACISJ Length = 435 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 50/400 (12%), Positives = 124/400 (31%), Gaps = 32/400 (8%) Query: 32 SMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSA 91 ++ + Y+ A + L+ + ++ + + ++W Sbjct: 20 AVFLVPALALTVQSGYSYGAALLLVGALCSLHGWPRLPQDRWTWAFAAAMSCIGVLWLVL 79 Query: 92 FKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAM 151 + +K ++F++ + + L + + ++A + + Sbjct: 80 ANPLEGL-----GGWDRPSKFAFGIVCLLFVSTAAPKPRAQFWGLLVGCAGAGVVALWQV 134 Query: 152 YINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAIL----YTKKNHPFLFLLNSCAVLY 207 Y+ + G A +L+G + V L + + + + L Sbjct: 135 YVENSPRASGFPTGRTNAIQWGNLALLMGTMLAVQTLALREHLSRRAVAMACVGGLLALN 194 Query: 208 VLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYN 267 L+Q+R L + L ++ ++ + L + +K + R+N Sbjct: 195 ASVLSQSRGGWLALLMATPVGLYFLWHFYRRELWRMLAGTTIALVVLGAANHKVLAERWN 254 Query: 268 EALNDLNSYTNAN-SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 ++ Y + + TS+G RL + + ++ P VA Sbjct: 255 VMEKEVLIYGSERAADTSVGQRLEHWRFAWEVGLEKPLLGWGMRGYLAEKEKRVAAGQYE 314 Query: 327 RGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR--------------- 371 LE+ + HNE ++ GL+G+ L Y + + R Sbjct: 315 PSILEYI--YTHNEPLDMFIKAGLVGVLLLLLFYAVPLGMFWPTRARMAAYAGQAAEVRA 372 Query: 372 -----ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIV 406 + + + L G G++ V S + + ++ Sbjct: 373 QVLALRMAGVCIPLLYAGFGMTQVFFAHNSGIMFYLFMVM 412 >UniRef50_A7AIE4 Putative uncharacterized protein n=5 Tax=Bacteroidales RepID=A7AIE4_9PORP Length = 607 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 48/392 (12%), Positives = 118/392 (30%), Gaps = 48/392 (12%) Query: 44 IKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATY 103 + ++++ + + ++ LP + L+ + +++D P + + Sbjct: 49 VFWFHLSMALMAIGTVVTAWPGGRKSIPFALPDGLLLLFAGITLATYDWQLDPEPEKLLF 108 Query: 104 HSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAM-----YINSIHE 158 + + + ++ K L+ L + A + M Y S H Sbjct: 109 GGQ-------LVVLWFLLRYFLTEAPCLKFFFLFVLMLTGLVEAVWGMQQLHGYAYSNHS 161 Query: 159 NDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATL 218 R++ ++ V L +K + + + A+L VL +R+ Sbjct: 162 LFRLTGSFFNPGPYCGYLAVVLPVCLWTALRFQKGMHYFGWVCAGAILIVLPAGMSRSAW 221 Query: 219 LLFPIICVAALIAYYN---------KSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEA 269 + + C + K T + ++AIL I ++ Sbjct: 222 MAAVVACGWVYWTERIGWEKTKAVCRRYKNATIPFIAIVAILVGCTIAGVYGMKQ----- 276 Query: 270 LNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGA 329 S RL M+++ + P + + + A Sbjct: 277 -------------DSADGRLLMWKVTVKAIAGQPLAGTGLGGFPAAYAEAQGGYFATGNA 323 Query: 330 LEF------SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIV 383 + + NE ++ G +G+ G+ + S+ Y + R G L + Sbjct: 324 TDREKRVAGCPEYAFNEYLQIGLEQGVGGLIVFVAWLGSMAYYGIRNRQQGTAGGVLALA 383 Query: 384 GIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 +S + +P ++ + L + + Sbjct: 384 VFAVSS---YPLQLPSFWVALVFLGAICVTED 412 >UniRef50_UPI000197B9DC hypothetical protein BACCOPRO_00097 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B9DC Length = 588 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 49/384 (12%), Positives = 118/384 (30%), Gaps = 47/384 (12%) Query: 42 FSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRA 101 F + + VCLL ++ ++ + L I W + + Sbjct: 41 FWTYLVVLLGSVCLLGYLIERKRLRITRVDGAWSLFI--------GWACLSCFSDGNVLS 92 Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEND- 160 S+L + + + + L L + + L+ +L I+G A + + Sbjct: 93 GKCSFLLS--LLVLWFILRLLFLFRPETRELFTRLWLTVALGEAISGMAQLYGFTYSHHA 150 Query: 161 --RISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATL 218 ++ + ++ + L+ +K L + VL ++R+ Sbjct: 151 LFNLTGTFFNPGPYSGFLAILLPWALHVALHNRKLTGHYAWLCVLVICVVLPAGRSRSAW 210 Query: 219 LLFPIICVAALIAYY--------NKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEAL 270 + + LI+YY + PK+ + ++ + +LA ++ Sbjct: 211 IAALLGSAWVLISYYKAAIISYTRQYPKRIAAMLLASVLLLAGGAYGMYHLKKD------ 264 Query: 271 NDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG-- 328 S RL M+++ I + E+ A + + Sbjct: 265 -------------SADGRLLMWKVSTQIIREQRGLGVGVGHFPEAFAEAQASYLKHASSQ 311 Query: 329 --ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIG 386 + + NE ++ G+ + L + F++A + + G+ + Sbjct: 312 EKWVAGCPEYAFNEYLQIAVELGIFPLMLFLGVGGGAFFLAVRTKQSGISGALIAFAIFA 371 Query: 387 LSDVIIWARSIPIIIISAIVLLLV 410 S + +P I + L + Sbjct: 372 FSS---YPLQLPDFWILWVCLCAL 392 >UniRef50_A5FG38 O-antigen polymerase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FG38_FLAJ1 Length = 773 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 62/428 (14%), Positives = 127/428 (29%), Gaps = 43/428 (10%) Query: 19 MILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSI 78 +I++ + Y + F+ + I+ I L L L+ Sbjct: 32 LIIDFLPYFKSLEIINPQFLYLSVINLIFGIYFYFNTNVLSNTVFSLLKRSYIFRLYLAF 91 Query: 79 FLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYT 138 L+ + L + + F I I + LT+ + K + Sbjct: 92 ILLCGISLFSAKNSSLVFTKFTE----------IAIVFCLFINLTILLKDKFDLLYKIVL 141 Query: 139 LYSLSFLIAGYAMYINSIHENDRIS---------FGVGTATGAAYSTMLIGIVSGVAILY 189 + +S N + S G A S + + I + Sbjct: 142 IIGISAFFQSLQQLQNFLIIPKNTSIMDLLWSMKGNTGNINILAASLTIKIPFLLLGITH 201 Query: 190 TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKS-------PKKFTS 242 F + +V+ V+ LT R L+ +I ++ ++ K Sbjct: 202 FNSYKKIFFTVTLFSVVSVIFLTGARTPLINLFLIFFIYIVYLLKENTFSKPGFIKIIYL 261 Query: 243 SIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKS 302 + +L A+L + I NRY N + S ARL + + K+ Sbjct: 262 IVPVLCAVLYTNSIFEKSKDNNRYVALENRIERINA--EDNSSKARLTFWGNAFEMIKKN 319 Query: 303 PFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFS 362 P + ++H HN+ IE + G++ L ++ Sbjct: 320 PILGIGLGNYQIESIPYEK----TTSYDLIVSLHAHNDFIEISAETGIINGLIYLSIFIL 375 Query: 363 LFYIAY-----------KKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 +F I + AL L+L + L + ++ ++ I + ++ Sbjct: 376 IFSINLKNVLKSNDSHTRLTALLTLMLVIVYGVDSLFNFPMYRPTMSIFFSLILAFTVLN 435 Query: 412 NNRNNTIN 419 N ++ + Sbjct: 436 NFKDKNLQ 443 >UniRef50_B6A4C0 O-antigen polymerase n=11 Tax=Rhizobium RepID=B6A4C0_RHILW Length = 424 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 140/392 (35%), Gaps = 20/392 (5%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 I F I+ + F+ I + + L L N + + ++ + + + L+ + Sbjct: 28 IAVFLFAILPGLSPNFNSFILLGSMVWGLYCLTTGSLALNLSKSDRLVAIGMSIYPLVMI 87 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 + + + F +++ + + + + ++ Sbjct: 88 ASIFVNPPYSEELDWIFR------LLPFFSVWLLLPRMRQSPDGRLVPLFILGAGIGMIV 141 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVL 206 + + +R G A +L G ++ + + K + +L A L Sbjct: 142 TFLFSLLQIMFLMERAEAGTSNAALLGVIGILFGGIALLNVQSPKSVEQRIAILGYAAGL 201 Query: 207 YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI-AILASIVIIFNKPIQNR 265 + L+ TR+ L+ P+ V L + S S+ + + A ++ + + I +R Sbjct: 202 GCVLLSGTRSAWLVIPVHIVIFLWYFRKHSFHLSLRSLAITGSLLFAGLIALGSGQILHR 261 Query: 266 YNEALNDLNSYTNANSV-TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHN 324 ++ S ++ TSL AR A+Y+ ++ K P + ++R S V Sbjct: 262 IEALQENMASLERSDGEVTSLSARFALYKGAISAISKDPLTGYGPQNRMAS----VLAEL 317 Query: 325 RLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA--------LGLL 376 + + H+HN + AG G+ GI + + + A++K A L Sbjct: 318 PDSLRPQLTYSHVHNGFLTAGIDAGIFGIAALSLMLATPVIGAWRKEAGPGRDLAIALAL 377 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 +L V G ++ +++ I + L+ Sbjct: 378 LLVSSYVITGSFGIMFNQKALDPIFAYLVALI 409 >UniRef50_A6LHH5 Putative membrane protein n=3 Tax=Bacteroidales RepID=A6LHH5_PARD8 Length = 602 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 50/406 (12%), Positives = 105/406 (25%), Gaps = 46/406 (11%) Query: 46 IYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL--IWYSAFK---------- 93 + + + + K + L + + L +W + K Sbjct: 12 LLGTLLLSAPFAGLGMLSTHLVTEKTFWIQLITLFLSAVSLQGLWLNPSKELCPWTYVDI 71 Query: 94 -----VDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAG 148 + Y + K+ G +V L Q+ + ++ Sbjct: 72 LPLSLLGLILLSYPYSIHPEPEKLLFIGQMVVLWYLLRQVLHECPVLIGYFSMFFIATGL 131 Query: 149 YAMYINSI---------HENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFL 199 H R++ + + V+ +L K + +L Sbjct: 132 IEAIWGFRQLQGWAYSNHSLFRLTGSFFNPGPYSGYLAITLPVALGILLEQSKRNMPYYL 191 Query: 200 LNSCAVLYVLAL--TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 C ++ L +R+ + + C Y + + Sbjct: 192 SMGCIGTAIVVLPAGMSRSAWIAVVVSCAWVYALYRLDRKQ-------AATRLRQHKRWY 244 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 I + YT S R M++I K P + S + Sbjct: 245 IIGGILGGILLLGGSASLYTLKKD--SADGRFLMWKITTKAIQKQPITGTSLGGFPAAYA 302 Query: 318 LLVAEHNRLRGALE------FSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR 371 AE+ A E + NE ++ G +GL+G+ + LFY K + Sbjct: 303 ETQAEYMASGKATEQEKLVAGCPEYAFNEYLQIGLEQGLVGLALFIGWLGLLFYKGIKNK 362 Query: 372 ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + + S + +P + I L ++ + Sbjct: 363 RYACCGGLMSLAIFAFSS---YPLQLPEFWVVLIFLGVMSVTPDKD 405 >UniRef50_A3N1D5 Putative uncharacterized protein n=6 Tax=Actinobacillus RepID=A3N1D5_ACTP2 Length = 449 Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 71/431 (16%), Positives = 144/431 (33%), Gaps = 33/431 (7%) Query: 4 SFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGR 63 SF + +KS I FF + + + I I + + LL ++ R Sbjct: 28 SFYMEHAMLARVKSYNNQLYSILIGLFFILALPLKTSYSLIPILLAVSGIALLVPHIKSR 87 Query: 64 QENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLT 123 N + + L S L +I + K S + L + L Sbjct: 88 TFNLDKADKWLIASFVFYFTLCVISFMTHKGKFSELDLPSRAVLT----------LPILA 137 Query: 124 LTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVS 183 + + ++ +LY + + + ++ + D+ F A M + + S Sbjct: 138 VLYKKHIQQVWILYAILAGGIVAGVVSIIQVFGFDLDK-PFPKTMHIQAGDMAMSLAMFS 196 Query: 184 GVAILYTKKNHPFLF----LLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKK 239 A+ Y L L++ + LT R + P + A + K Sbjct: 197 FCALFYFHAQKQRLLTVTCLISGLLAMIASFLTTARGAWIGVPAVLAAIFLLNRKNLSKW 256 Query: 240 FTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNI 298 + ++ I S + I RY EA +D+++Y +N+ TS+GAR M++ L Sbjct: 257 ---VVTSVLLITLSGGFFAKETIYQRYLEAKSDISAYVDRSNTSTSVGARFDMWKSSLLG 313 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 + P E E + + A F H HN+ + + +G++G+ + L Sbjct: 314 IQEKPLFGWGLEGVKEMRKQHFEQGKISQYASGF--AHAHNQYLHDTATRGVLGLIALLA 371 Query: 359 LYFSLFYIAYKKRALGL------------LILTLGIVGIGLSDVIIWARSIPIIIISAIV 406 + F ++ + L ++ L+ + S + + + Sbjct: 372 ILFVPLSSFWRNVRQAAPNSLAHLWGVLGITHILLMMSYFLTQAFLSHNSGVMFYFTVTL 431 Query: 407 LLLVINNRNNT 417 + L + Sbjct: 432 IFLGLQKTAQN 442 >UniRef50_C6HYN6 O-antigen polymerase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYN6_9BACT Length = 544 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 119/387 (30%), Gaps = 28/387 (7%) Query: 44 IKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATY 103 + + +V S + + + L + I + S + Sbjct: 106 TTVLTLITLVGFFSNSKKIEKYEALPLEASFRRLLLLFCGIVAISVLHTDISGSGMT--F 163 Query: 104 HSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR-- 161 + L K + + FLT + + ++ + + + ++ G+ Y ++R Sbjct: 164 FTALVDYKRWFDPLMVFFLTSYLVQEEEDAKMILYMMAFTLVVIGFGTYWQRHELDNRSH 223 Query: 162 ----ISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF-LFLLNSCAVLYVLALTQTRA 216 T A+ ++ G ++ K LF + L L+ TQ+R Sbjct: 224 YVRLTGLAGQANTMGAFYANYAFVMIGYLVMKGMKRIRRSLFFIGIVGCLLGLSATQSRG 283 Query: 217 TLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLN-- 274 L F + + + V + +A ++ R + + Sbjct: 284 DALGFVGGMMVFFLL----RSRLQFVIYVSAVVFIAYNPQYLPGGLKQRVERTVQQQSGD 339 Query: 275 -SYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFS 333 S RLA+++ + + ++P + + V + G LE Sbjct: 340 GLDKKTQLDASARTRLALWKGAIRMIEENPVMGVGYKMFQTYIFSYVDHNEETAG-LELK 398 Query: 334 NVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA-----------LGLLILTLGI 382 HN + G+ G+ + L + +F IA++ + L + Sbjct: 399 GRDGHNAYLMIGAEMGIPALLVFLSILVFMFRIAWRSYRASPDLYWKTISIVALCSITSL 458 Query: 383 VGIGLSDVIIWARSIPIIIISAIVLLL 409 V + +++ + + + +LL Sbjct: 459 VITNMFGSRVFSLVLTGYLWMLLAILL 485 >UniRef50_A9IHC6 LPS ligase-like protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IHC6_BORPD Length = 403 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 44/393 (11%), Positives = 117/393 (29%), Gaps = 25/393 (6%) Query: 44 IKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATY 103 I+ I + C++ L ++ + +G+ ++ + Sbjct: 8 SVIFYILMVACVIGLAGMACAPSWRMPGFWDTWKPLGVGMALVLASVLASQAYHGQFSGA 67 Query: 104 HSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRIS 163 + + + L + + A + + R Sbjct: 68 G----LERAIRAAAMLPMTWLLLYSRPATLRHIQWGLLAGGATAAWLLLFPQFLAGSRPK 123 Query: 164 FGVGTATG---AAYSTMLIGIVSGVAILYTKKNHPF----LFLLNSCAVLYVLALTQTRA 216 T T+L +++ ++I + L L L ++TR+ Sbjct: 124 TSAYTPYNTVTFGNLTLLFAVMAWLSIGWQLTRWRRAEIALKLGVGGLTLAGFIASETRS 183 Query: 217 TLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY 276 L P+ + + Y + +++ + +A + VI+ N + R + Sbjct: 184 GWLAIPVFLLIGVCVYNRVPWSRRLAAVGVAVA-VGCGVIVANDALNARVEAGVRQWKEC 242 Query: 277 T-NANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV 335 + TS+ R+ + + ++ SP +++ + + + Sbjct: 243 QVHELRNTSICVRVQLARAAIEMWKTSPLFGVGERGFEPALDAQQKRG-VVSADVARTFG 301 Query: 336 HLHNEIIEAGSLKGLMGIFS-TLFLYFSLFYI----------AYKKRALGLLILTLGIVG 384 HN+++ + G +G+ L +Y + A + A L + LG Sbjct: 302 ETHNDMLYVLAQYGAVGLLFGLLVIYLLPAWYFARRLGHDDRAIRTAAAMGLSICLGFAI 361 Query: 385 IGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 GL++++ + ++L + Sbjct: 362 FGLTELMFRGMRTVSFYAIWVSVMLALTYPRRD 394 >UniRef50_C9LXH7 Putative O-antigen polymerase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LXH7_9FIRM Length = 448 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 56/400 (14%), Positives = 117/400 (29%), Gaps = 50/400 (12%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 Y + + + + I L L++ + +P ++F + Sbjct: 15 IYYAILLEAFLIALSPPLATAALLLGVIFWLARLVVDKECRRFRRLPYDVPAALFAL--- 71 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 L S F + F + Y+ Y + I SQ K L L Sbjct: 72 -LGAVSIFVSPDRGF-SFYNYYNLVGVYLLTYLLIGQNVQASQDIRKIVYALGLSCVLVL 129 Query: 145 LIAGYAMYINSIHEND-------------RISFGVGTATGAAYSTMLIGIVSGVAILYTK 191 L Y R+ A + + + + Sbjct: 130 LYGFYQFAFGIDTSTMKWVDGDAFPELKKRVFSTWENPNILAGYLDVAMCFAFAFFVKMR 189 Query: 192 -KNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 + + LA+T R L+ +I + + + ++L + + Sbjct: 190 DQRRRIALGAALVLLAACLAMTYARMAFLVIALIFILYGMFRDGR--------VLLAVGV 241 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 +A + +F+ + +R + TS RLA++E L + PF Sbjct: 242 VAGALFLFDPALLDRVTSVFTRV--------DTSSEMRLALWESTLAMIGDHPFFGIGWG 293 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 + + + VH HN + + G++G S L+ +F +A+ Sbjct: 294 AYWMVYPEY----DFYLQGADVLIVHAHNMYLNYAAEIGVVGAVSFLWFFFGTMGLAFFS 349 Query: 371 RA-----------LGLLILTLGIVGIGLSDVIIWARSIPI 399 + L + + I GL+D +++ + Sbjct: 350 KVHDSEGFRQGLMLAISLAFFSIALNGLTDDVLFNIPSSM 389 >UniRef50_A6LK62 O-antigen polymerase n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LK62_THEM4 Length = 1070 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 61/431 (14%), Positives = 134/431 (31%), Gaps = 42/431 (9%) Query: 20 ILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF 79 I IT +L K +T +L L + ++ + + Sbjct: 6 IFLNITIVLVALFASPKLTYEFSVPKYAILTFAFSVLFTYLAAKVIKEKKISIYISPAHI 65 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 + + + + + +F + F + + K+ ++L Sbjct: 66 IWFFFAISSIISSFNTLRDNPFYFRQSFDIGLYVLFNVLVAFYISSEYNEKKRINILLFT 125 Query: 140 YSLSFLIAGYAMYINSIHEND-------------RISFGVGTATGAAYSTMLIGIVSGVA 186 + L+ L +N D I VG A ++ ++ Sbjct: 126 FMLTGLFISIDALLNFYIGYDIFLGKVGQPLSRGSIKASVGNVIFVANYIDMLLPIALYF 185 Query: 187 IL---------YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP 237 +L + L++ L + ++QTR+ L ++ V +I Y+ Sbjct: 186 LLAYDLGVKKFWQVSLIKLSSLVSFILGLMAVIVSQTRSEYLAIIVMSVMYVIFYFVWRK 245 Query: 238 KKFTSSIV---------LLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGAR 288 K + +L+ + IV+I+N +N N ++ SV+S R Sbjct: 246 KSSPIPQIKKLTNLLLIVLLIVSVFIVLIYNTENPLTGQGKVNMTNRFSAMASVSSRDER 305 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVH---LHNEIIEAG 345 + L ++ + + E+ L + + HN+ + Sbjct: 306 FLSWFTSLELWEDHKIFGTGIGTYQLLSLTKMGEYLEKHPELYYGWNNFKRAHNDYFQVL 365 Query: 346 SLKGLMGIFSTLFLYFSLFYIAY--------KKRALGLLILTLGIVGIGLSDVIIWARSI 397 G++G+ + L L Y + + L L L++ IVG + + + Sbjct: 366 GETGIVGLSLIILLLAFLVYYFFTIPKKIENRDDLLLFLSLSISIVGFSIQSFFSFPGHL 425 Query: 398 PIIIISAIVLL 408 ++AIV + Sbjct: 426 LPNALAAIVFV 436 >UniRef50_D0IC13 O-antigen ligase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0IC13_VIBHO Length = 412 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 55/399 (13%), Positives = 117/399 (29%), Gaps = 25/399 (6%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 LE + + + + + + I + + + + R + + Sbjct: 17 LEALFLLSPLAVLFLGIFNIAETKSILSRLIPLVCVYCLWFYRDALKQNWQAARTRPLMI 76 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 L+ ++ F + I L L + + + L Sbjct: 77 TSLVAFFYF--------GFPHLLRGDEFAFSRTLVTCLIYLLMLP-WAQLPRHYLTRMLI 127 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL 200 + L AMY R+ A + ++ ++ + L Sbjct: 128 FAAILCGLNAMYEFWGLGIQRVGVATNPIPYALFCAFMVLGALHQCLMAKSWPWRIVSWL 187 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 + LT R +L P++ V ++ S + + +++ + + F Sbjct: 188 GVALAGTAIVLTDVRGVILFLPVVMVYMVLRIVQPSFRTYLMALLAVALLCGLGYKAFED 247 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 IQ R + N N TS+G RL ++ G I ++P ++ E ++ Sbjct: 248 KIQQRIAVTEYEFTQIANGNFNTSIGIRLTLWLQGKEIVSQAPIFGVGDDALREDISARF 307 Query: 321 AEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR--------- 371 + HLHN+ + + G++G+ L + S Sbjct: 308 NRGDSNP-------PHLHNQYFDTLARYGVLGLMVLLAWFVSPLLYVTSSAPHGGVGFSL 360 Query: 372 ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 L L L + GL+DV + + L Sbjct: 361 DPLLSSLMLMVALAGLTDVPFHHTHLVYLFTLFTGAWLF 399 >UniRef50_C1SIP4 Lipid A core-O-antigen ligase-like enyme n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIP4_9BACT Length = 390 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 56/400 (14%), Positives = 133/400 (33%), Gaps = 36/400 (9%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 IL F + V + + + + ++ + + + I L + + ++ Sbjct: 5 ILLKFGALANPVSISAAEGTFGLIILIAIYKIYKTKDYSVFKKGFFIFFLLMVVAEIIST 64 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 ++ + +F K L L++ L Sbjct: 65 FIGVNPGKSLPRLKSFWVLLYLPVIYVVF------------EGRDKAGYLMWLFAGGILT 112 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAI---LYTKKNHPFLFLLNSC 203 + +Y + DR+ + + LI I + + LY K L + Sbjct: 113 TVFGLYEYFSGKVDRLQGFLTHSLTYGNVAALICITALGLLVMKLYKNKKQLALTVATFL 172 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQ 263 L L L+ +R + I A ++ Y+ +++ L I + ++ Sbjct: 173 ICLVGLVLSGSRGPIFSLLITGFALVVYRYH----LKGVVGGIVLIALICGGIYADPQVR 228 Query: 264 NRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEH 323 R+ +++++ + +S+G RL ++E + PF + + ++ + Sbjct: 229 ERFTVTIDNIHK-----TESSIGTRLVLWEAASEAIMLRPFFGYGKGNFKDEVSKYI--- 280 Query: 324 NRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLI-----L 378 S H HN I+ L G G+F+ L +L + Y++ I + Sbjct: 281 ----NVPTSSRAHAHNSYIQYTFLHGFFGLFALLGFIGTLMWEIYRRSKCSPFIKVGMFV 336 Query: 379 TLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTI 418 + + GL++ + + + +S + L L + + Sbjct: 337 FVVFLLEGLTENNLSDSEVVMTCLSVVGLTLAPGRPSIGV 376 >UniRef50_A7HKE5 O-antigen polymerase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HKE5_FERNB Length = 1090 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 58/438 (13%), Positives = 131/438 (29%), Gaps = 60/438 (13%) Query: 42 FSIKIYNITAIVCLLS-LILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFR 100 FS Y I I + L R F +I + R Sbjct: 29 FSTPKYAILTIATFILGFYLLYRLFKNKEIKFFATPVHFTWLAFSIIALLSTMNTFQDNR 88 Query: 101 ATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEND 160 + ++ + F + K + ++ L+ L +N D Sbjct: 89 FFFRQAIDIGLYLFLNVLLSFYFSSIINKKEYIVRFLFIFVLTGLFIAINAILNFYIGYD 148 Query: 161 -------------RISFGVGTATGAAYSTMLIGIVSGVAI------------LYTKKNHP 195 I +G + ++ ++ + L+T Sbjct: 149 ILLGNVGAPFERASIKANIGNVIFVSNYLNMLLPIAIYFVASLDFGYLNIKRLWTVYLFK 208 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKK---------------- 239 + L+++ V+ +QTR+ L I + + AY+ KK Sbjct: 209 IVSLISAILYFDVIVFSQTRSEYLALVIELILFVFAYFFYLRKKEDKIAEELKKKDPKTL 268 Query: 240 ------FTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYE 293 SI++ I + IV+++N P + + ++ +SV+S R + Sbjct: 269 KRLLRFREMSILIFILMAIIIVVVYNIPTPFNNYASFKMTDRFSAMSSVSSRDERFLSWF 328 Query: 294 IGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVH---LHNEIIEAGSLKGL 350 + I+ + + +++ + + HN+ + S G+ Sbjct: 329 STIYIWKNHKILGQGIGTYQVYGLYGISDLIEAHPEYNYGWNNFKRAHNDYFQVLSETGI 388 Query: 351 MGIFSTLFLYFSLFYIAYKK--------RALGLLILTLGIVGIGLSDVIIWARS-IPIII 401 +G+ + + + L K A+ +L L + V + +P + Sbjct: 389 LGLSAIVLMLILLVMYVVKNIRKVEDKDDAILFFMLVLSGIIFAFQSVFSFPGHLLPNAL 448 Query: 402 ISAIVLLLVINNRNNTIN 419 ++ V+ + + N +N Sbjct: 449 LANFVISIGLGKYFNKVN 466 >UniRef50_B0C275 O-Antigen polymerase, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C275_ACAM1 Length = 868 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 51/428 (11%), Positives = 128/428 (29%), Gaps = 43/428 (10%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 S++ + + F+++ S + + L ++ Q L Sbjct: 25 SRSLLGILCLGLYFLFTLMPDSHSIMVSWPWVFVWQLTWLCPVLWLVGQLWQRSPIPRLQ 84 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 + + L ++ + F Y A I + V + L+ ++ V Sbjct: 85 QGLDWLAALTMVGLLLS-ASLARFPNQARWYTGAALGGIAAIYCVNAWARTPLRRQRLLV 143 Query: 136 LYTLYSLSFLIAGYAMY--INSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKK- 192 + S ++ ++ + E +R+ A+Y+ + + + + Sbjct: 144 TQGIVSAGLIVTSLGLWVSQTLLPELNRLQSLQKLGVQASYNFSTLELRNWAPFGHQNYV 203 Query: 193 -------------------NHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYY 233 + + L L T +R L + V + + Sbjct: 204 AGYLVLALPLLLGLGLTHLRWRWWWFGCLGLGLIDLYTTSSRGGWLGLLVAGVYLGLVLF 263 Query: 234 NKS--PKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 + +++ L + +++ N + + ++++ S + RL Sbjct: 264 RQQGLNRRWLMGGTLASLGIVVVLVFANNRLS-------SQISNFLQGRSGGDMAYRLIT 316 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 + G N+ ++ P + S + L + LH + + + GL Sbjct: 317 HVAGWNMGLQQPVTGMGVGSVPLAYQAYRPHWAGLEAEHAYQ---LHGTLPQIWAELGLA 373 Query: 352 GIFSTLFLYFSLFYIAYKKRALG--------LLILTLGIVGIGLSDVIIWARSIPIIIIS 403 G+ + L L + + LL LG + L+D + I ++I Sbjct: 374 GMVPFVLLLGWLIWQGGRYMTQATVNLLPQSLLAGLLGYSLVSLTDYQLDNIGISGLMII 433 Query: 404 AIVLLLVI 411 ++ L Sbjct: 434 SLGCLAGF 441 >UniRef50_Q985Q6 Mll7573 protein n=1 Tax=Mesorhizobium loti RepID=Q985Q6_RHILO Length = 417 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 65/378 (17%), Positives = 138/378 (36%), Gaps = 23/378 (6%) Query: 42 FSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRA 101 ++N A+ +L L LR R+ N + + + ++I+ +L+ Sbjct: 1 MVSFVFNGGALWSVLLLALRKRRFNVDPAMMAMTIAIYAYCAANLV------ASIVNSAI 54 Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR 161 + + I + T + K+ ++ + +A R Sbjct: 55 ARDALHLIPLVTFLFFPISYSTWSITQKTTLVRIIVLSSMAACFVALLLAVFQQHWLGMR 114 Query: 162 ISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLF 221 G G A A L +V L + H L + + + TR L Sbjct: 115 AEGGAGNAIVFAEVLCLAVLVCVAGALSDIERHRIALLCAALGGTIAIIYSGTRIVWLAL 174 Query: 222 PIICVAALIAYYNKSP-KKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYT-NA 279 I +A L+ ++ + +VLL+A A I + + I R + +DL++ N Sbjct: 175 LIAGIAVLLINQHRLKGRNAIRLLVLLLAAGAVIAAVGFQTISGRVDFLRSDLDALAVNG 234 Query: 280 NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHN 339 + T++G RLA+++IGL F + P + L+ + + ++ H HN Sbjct: 235 DHTTAIGLRLAVWDIGLKAFREMPLFGHGVG----ATQALIKQGFHDQFGMDAGFNHFHN 290 Query: 340 EIIEAGSLKGLMGIFSTLFLYFSLFYIAY-----------KKRALGLLILTLGIVGIGLS 388 + A GL+G + ++ A + A ++I+ + + G++ Sbjct: 291 GFLTALVQAGLLGAVTLAAMFVVAARNAAVVLRNSTDPIERFGATMIVIMVITYLTSGMT 350 Query: 389 DVIIWARSIPIIIISAIV 406 ++I + +++ +V Sbjct: 351 GILIGHDILDSVLMVFLV 368 >UniRef50_C3NSX8 O-antigen ligase n=24 Tax=Vibrio RepID=C3NSX8_VIBCJ Length = 399 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 64/407 (15%), Positives = 127/407 (31%), Gaps = 23/407 (5%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 IT F ++ + + FS+ + + + LI G N ++ LS + + Sbjct: 5 ITKTSIFLTISLLLITPGFSVVAVGLLTLYSSVKLIKNGLNLNKFDIIPLITLSAYFL-- 62 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE--SVLYTLYS 141 + + YL+ + + F K ++ + Sbjct: 63 --------SNLPITIIDGDTLRYLDAGIRALLCIPMYFFIKNEISKGANLDNTLCTSTIL 114 Query: 142 LSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLN 201 SF +A Y I R+ + + + + +T+ + L+ Sbjct: 115 ASFGALAFAFYQFFILNMPRVDGFLFSINFG--YLAAALAILSFGLSFTQTRFKYYLYLS 172 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 A LT TR +L + + I K K T L+ +L S+ F+ Sbjct: 173 VVAATVATILTLTRGAILTLLFVFILFFIVNVRKIKFKQTLVFTLISFLLVSVSYQFSPR 232 Query: 262 IQNRYNEALNDLNSYTNAN--SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 IQ R + + +++S + N + S G RL ++ + F +P + R L Sbjct: 233 IQERVDFTIFEISSIASNNIHAAASSGGRLQLWYAAVEAFKHNPIWGTTYSERESLNIEL 292 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA------- 372 E H H++ EA + G +GI + + F + Sbjct: 293 FKEGKVDEWTSTVPRGHAHSQYFEAIASNGTLGILAIFAMLILPFGVFLNDYRKTGSPIS 352 Query: 373 LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 + G + L++ + A I + + N Sbjct: 353 QTGYLFAFGFIIFCLTEAPLQANLIGTFYGFMVAIFYAYIAAKRAKN 399 >UniRef50_C5NWF6 Licd protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NWF6_9BACL Length = 718 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 61/443 (13%), Positives = 143/443 (32%), Gaps = 41/443 (9%) Query: 4 SFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVD-NTFSIKIYNITAIVCLLSLILRG 62 KL + + + IL + Y +C + + F+ N + I+ ++ Sbjct: 1 MLKLIEKNYFKINLAFILIVAVYCMCGLIVPLQFISANKVVAGGMTLLGILLATYNLVIK 60 Query: 63 RQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGS----- 117 + L L L + ++ S N + Y T G Sbjct: 61 KVYLKIKTIEYLLLFFALNIITSILVISYGYSTNIKNTLVFFIYFLTVFPIFTGITREEG 120 Query: 118 -----FIVFLTLTSQLKSKKESVLYTLYSLSFLIAGY-AMYINSIHENDRISFGVGTATG 171 + + S++ + + + Y +YI R+ + + Sbjct: 121 KKIYDYFFYTVTVLNTFGVLVSLIQFVLLKGYRVHDYKGLYIRQGFVESRLFGILASPNF 180 Query: 172 AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 + ++++ I + I +K + ++ L+ + L+ +R + I IA Sbjct: 181 LSLISLIVIIFLVLKICSFEKVYRYISLVTIVLNFIYIVLSGSRTAFICMMIAAAIYSIA 240 Query: 232 YYNKSPKKFTSSIVLLIAILASIVI------------IFNKPIQNRYNEALNDLNSYTNA 279 + + + V+L ++ + ++ + + N+ N+ + Sbjct: 241 MFYQKGNIRSLFKVVLAIVVVLFSYKAVNFTSEQYLHYNKERLEAQDKKLENEDNNLSLE 300 Query: 280 NSVTS----LGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV 335 + TS R A+++ + K P S + E + E ++ Sbjct: 301 RTDTSEENISNNRFAIWKSTASFVPKKPIFGYSGGNWYEIGKKINPEEYIIKEHYL---- 356 Query: 336 HLHNEIIEAGSLKGLMGIFST----LFLYFSLFYIAYKKRALGL----LILTLGIVGIGL 387 HN +E GL G S L + S+ ++ + L L+ + I+ + L Sbjct: 357 -THNGYLEILFYNGLAGFISMGIFVLSFFVSMIKRIFRDKEEDLVNKDLLSMIMILMVIL 415 Query: 388 SDVIIWARSIPIIIISAIVLLLV 410 + + + I + I+L L+ Sbjct: 416 VSNLFLSSTFYGISLLGIILFLM 438 >UniRef50_B5YD26 Heptosyltransferase family n=2 Tax=Dictyoglomus RepID=B5YD26_DICT6 Length = 781 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 51/416 (12%), Positives = 124/416 (29%), Gaps = 42/416 (10%) Query: 26 YILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLD 85 Y+ F ++ +I I+ + + + + + R+ + L IF++ L Sbjct: 48 YLYIFLFLLPFLSSGKIAIGIFIAFVLWLVDTFLAKDRRFFETLDTFTLLYIIFMLINLA 107 Query: 86 LIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFL 145 ++S + V + K ++ + + K K + L+ + +FL Sbjct: 108 STFFSPYLVP---------AIKGYLKFCVYFGLFLVFRDVFKDKEKIKRALFVILFSTFL 158 Query: 146 IAGYAMYINSI---------------HENDRISFGVGTATGAAYSTMLIGIVSGVAILYT 190 ++ Y +Y I R+ + + + +I Sbjct: 159 LSLYCLYQWIIKVPPLAGWEDVEFVGENVTRVYGTLQNPNLLGGYLIGVFPFILSSIFIF 218 Query: 191 KKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 K +F + + T +R L F + + T +I Sbjct: 219 KFKSVPIF--ATLLSFLSIIWTYSRGAYLGFLFSMLVYFYFIFRIIWGYLTKKQRKIIFA 276 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 ++ I + + + S +S R+ +++ IF + Sbjct: 277 FIILLFFVGLGILIKSSYLQKRILSAFTLWGHSSNATRIVIWQRSFKIFRDFFLTGIGLG 336 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 + + F+ + +N +E G G+ + L + + LF +K Sbjct: 337 N------DVFRRVYAFYMEPRFTALASYNLFMEIGIEGGIFALLVFLLMLYYLFSRFIRK 390 Query: 371 RA----------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 + + + G D I + II ++ +++ + N Sbjct: 391 YNLWNLDYKVIGITAFASIVAPLFHGFVDTIWYRPYPQIIFWFSVSIIINLFKENK 446 >UniRef50_B8FDD3 O-antigen polymerase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDD3_DESAA Length = 762 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 57/451 (12%), Positives = 137/451 (30%), Gaps = 56/451 (12%) Query: 17 SSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPL 76 S+MIL I + F + ++ I + L ++ + ++ K+ P Sbjct: 60 STMILFAIVALTPFAVRPALYDQTNLPQTVFFIIGALLLSAVFCL--KSYFSPKSAAPPT 117 Query: 77 SIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVL 136 F + L L + + + A A +F F + + + + Sbjct: 118 VFFPLAALTLWGGLSIFWGTNAYEAVTIWLPWVACLFFFSAAFNVPDSRERRLLLLKGLF 177 Query: 137 YTLYSLSFLIAGYAM------------YINSIHENDRISFGVGTATGAAYSTMLIGIVSG 184 + +++ L + + S + + + + G Sbjct: 178 LSGTAVALLGILQHLGGDVLQHMGGENWFGVKQAEPPASTFTNRNMAVHFIVLTLPLGVG 237 Query: 185 VAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPI---ICVAALIAYYNKS----- 236 + + FL+ + +L L T R L + + A L+ Y KS Sbjct: 238 FFLQEKRGWPAAAFLVCTTCMLNYLFYTSNRTGWLCLLLQIAVFAALLLVYKVKSGAIGM 297 Query: 237 PKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN---------------- 280 + S+ + +A+ + K + ++ + +++ + ++ Sbjct: 298 NRGKMISLAVCLALFLVLFNCGPKGFEWQFGKVFQRVSALSQSDLESPGTSPETQAPADK 357 Query: 281 ----------SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGAL 330 S RL ++ L + P S + Sbjct: 358 KQDSPAAPRKYDASKRLRLDIWANTLAMIKDHPLLGVGMGSHKVLYPIYSRRAKVEGAFS 417 Query: 331 EFSN-VHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA-------LGLLILTLGI 382 E S ++HN+ ++ + GL G+ L+L S F I + ++ + + Sbjct: 418 EESQLSNVHNDYLQIAAELGLPGLIMVLWLGVSAFLILLRLFRKENGEEKFLVIAIAACL 477 Query: 383 VGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 GI L+ + + ++ + L ++ Sbjct: 478 AGISLNAAASFPFQRMVPLLVVSLYLAMLAR 508 >UniRef50_Q1NRK6 O-antigen polymerase n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NRK6_9DELT Length = 436 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 47/393 (11%), Positives = 121/393 (30%), Gaps = 14/393 (3%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 L + + + + + A+ L+ ++ R+ + ++ L I L Sbjct: 14 ALALITSYLILIPFRRAEIPMALMAVAGLVLMVRHRRELWQRQEVVLFSLLFAAIWLPMA 73 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 I T + ++L VL + L Sbjct: 74 ISLIGAVNPEKTLSTTAAFLRFYPAGIFVILTLAVAGAPAKLLRILAWVLLIWVLDALLQ 133 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVL 206 A + R++ G+ M + +S + +++ + P + + A + Sbjct: 134 AVTGYNSLGYPQPGRVNGFFGSGIHFG---MFMATLSPLLLVHAYRKWPLPAQIATLAGV 190 Query: 207 Y-VLALTQTRATLLLFPIIC----VAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 V+ ++ TR + ++ V L ++ V++ ++ + + Sbjct: 191 ASVIFMSGTRGGWVSLAVVLGGLAVWVLWREGVRASLPRLVVAVVVFGLVGAGTLYCFPQ 250 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 +R ++ + +L RL ++ G+ + P + A + + + Sbjct: 251 FSDRVDKTMLAFTG-DTELLDKALSDRLPIWSTGVKMIQAHPLNGVGARNFRYAYDEFAE 309 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLG 381 + G + H H +++ S G++G+ L + L A+++ + L Sbjct: 310 PDDYWAGE-GVTAAHAHQIVLDVASETGVVGLGGFLVV-VWLLARAWRRADPHTRQIMLP 367 Query: 382 IVGIGLSDVI---IWARSIPIIIISAIVLLLVI 411 L+ + S LL + Sbjct: 368 YALALLTVFFPLNSHYATYSTAWSSTYFWLLAL 400 >UniRef50_A7BYU7 O-antigen polymerase n=1 Tax=Beggiatoa sp. PS RepID=A7BYU7_9GAMM Length = 406 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 75/203 (36%), Gaps = 13/203 (6%) Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEAL 270 +++ R+ L ++ L+ Y + +L+AI++ + ++ R + Sbjct: 1 MSEGRSGYL---VLFCLILLFSYQIYHIRGLIIGSILLAIISVSAYESSDVLRQRVDRIS 57 Query: 271 NDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGAL 330 + +Y +TS+ RL Y L IF + P + S ++ L + Sbjct: 58 EGVENYQQGKVITSVELRLEFYRNSLAIFAQKPIFGHGSGSFSDEYQKLAEKQAIT---- 113 Query: 331 EFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY----KKRALGLLILTLGIVGIG 386 + HNE + GL+G+ L+L + ++ A K + L + I G Sbjct: 114 --MTTNPHNEYLMIAVQWGLVGVALFLYLLYVMWRTAIHHLPKLQKHQAQGLIVTIFVGG 171 Query: 387 LSDVIIWARSIPIIIISAIVLLL 409 L + + + I I + Sbjct: 172 LVNSLWLDNTEGHIFAYLIGIFY 194 >UniRef50_C9Y384 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y384_CROTZ Length = 219 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 2/212 (0%) Query: 206 LYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNR 265 +L T TRA ++ +P+I + L K I+ + L + + + I R Sbjct: 3 FLMLVATGTRAAIIAYPLIFLVLLAIKLYKEKHIPWKGIIAFVLALIVGIFMMKEDIAKR 62 Query: 266 YNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNR 325 YN+ +D+ +Y ++TS+GARLAM++ GL + F ++S + R E + V + Sbjct: 63 YNDFNSDIAAYDRNITLTSVGARLAMWQTGLEAAKNN-FLWQSTDQRNEIIAATVKKEPG 121 Query: 326 LRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK-RALGLLILTLGIVG 384 LRGAL F HLHNE++E SLKG G+ +LF A++K ++ L I+ Sbjct: 122 LRGALLFMKGHLHNEVVETLSLKGPSGLLLYFAFIVALFCYAFRKLNSIILCAFLASIIM 181 Query: 385 IGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 G+S V+ ++++ PI + +++ +V +N Sbjct: 182 FGISGVMFYSKTTPIAWMLTLIMSIVFLEQNR 213 >UniRef50_B9XBG9 O-antigen polymerase n=1 Tax=bacterium Ellin514 RepID=B9XBG9_9BACT Length = 621 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 54/426 (12%), Positives = 134/426 (31%), Gaps = 50/426 (11%) Query: 20 ILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF 79 IL ++ IL F ++ V + + +T L L K L P+ Sbjct: 14 ILALVIGILVFSALAFGAVGQWEFLVVQGLTV--GALLLWGIRLWLIPRPKILWTPVC-- 69 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 G++ + Y+ + + Y + +I ++ + + + + + Sbjct: 70 -WGVVAFVAYAIVRYLQADIE--YVARQELIRILVYAFLFLIVLNNLHRQELTQIFALAV 126 Query: 140 YSLSFLIAGYAMYINSI----------HENDRISFGVGTATGAAYSTMLIGIVSGVAILY 189 L LI+ YA+Y R A ++ V +L Sbjct: 127 IFLGMLISFYAIYQYVAKSNKVWTAVSPYTGRAGGTFIYPNNFAGYLEMLLPVGLCYVLA 186 Query: 190 TKKNHPFLFLL--NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLL 247 + +H L A+L + +T +R L+ + A + + + ++L Sbjct: 187 GRFSHVMKIALGYACVAMLAGIGVTMSRGGWLVAGVTLAALCGVLLTQRNFRIQALLLLA 246 Query: 248 IAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFR 307 + ++ +V+ R + ++ R ++++ ++ + Sbjct: 247 LLLIGGMVMAP------RLRSMNARFANTFSSGRAD--DLRFSIWKPAYRMWQDHFWLGV 298 Query: 308 SAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA 367 + + ++ HN+ + + GL+G L + L+ Sbjct: 299 GPDHFDYVFRIYR------PEDVQLRPGRAHNDYLNTLADWGLVGTIIVLAAWILLYAGV 352 Query: 368 YKKRA-----------------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 +K ++ +LG+ + L + + P + I AI L+ + Sbjct: 353 WKSWRAVRGVQDDFSRKKSNKYAFVMGASLGLFAVLLHATVDFNLHTPAVAILAISLMAI 412 Query: 411 INNRNN 416 +++ Sbjct: 413 LSSHLR 418 >UniRef50_A1SRT4 O-antigen polymerase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRT4_PSYIN Length = 416 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 61/410 (14%), Positives = 135/410 (32%), Gaps = 27/410 (6%) Query: 25 TYILCFFSMIIAF-VDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 ++ FFSM A + A++ L SL + + L ++ + L Sbjct: 15 FFVFIFFSMTFAVRSGTGYGAFPLLFIALISLPSLYRYIKAHPLTLLEKSLLTALIVFAL 74 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 L ++ + S + + + L + S+ + + Sbjct: 75 LPMLSAYFEGLSGSAYDKPSR----------YLLCALTFLLLLRYNVSLLSIALGAWLGA 124 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTK-KNHPFLFLLNS 202 A+Y +R ++L+ ++ K K FL + + Sbjct: 125 IFAGTNALYDVFYLGMERAGGRFTVVIEFGDISLLLTAFVLLSYQKLKNKIPQFLIITSI 184 Query: 203 CAVLYVLALTQTRATLLLFPIICVAALIAYYNK----SPKKFTSSIVLLIAILASIVIIF 258 L + L+Q+R + P++ + Y N S KK+ ++ LL IL + + Sbjct: 185 LLGLTAVILSQSRGGWIFIPLLVIIIATHYRNICFDLSKKKWLGTVFLLTTILVAGWLSA 244 Query: 259 NKPIQNRYNEALNDLNSYTNANSVT-SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 + + R A + + SY ++VT ++G R M++ G+ +P + Sbjct: 245 GELVSQRIKLAEDAIISYQKNDNVTPAVGVRFEMWKGGIQSIKNAPLFGGGDKGIITGKQ 304 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG--- 374 L+ ++ +HN+ ++ G + L ++F +R G Sbjct: 305 QLIDQNKIALSPGIIQWTSVHNQYLDTWGKYGFFTFMAFLAIFFIPLTFFITQRNKGDAD 364 Query: 375 -------LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + L G + L++ I S + ++++ Sbjct: 365 TRCASYCGITLCTGYLFFALTESIFTINSTVMFYSFSLIIFYSCAKTARD 414 >UniRef50_P44067 Uncharacterized protein HI0874 n=5 Tax=Pasteurellaceae RepID=Y874_HAEIN Length = 399 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 68/402 (16%), Positives = 141/402 (35%), Gaps = 30/402 (7%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 + L F +++I ++ I + ++ + L + + + K + L F L Sbjct: 13 LLVSLFFLTILIIPKGYNYAPIILSAIGLIYFIPLKKKLSFSSEDKKLIFSFLFYFFTFL 72 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 L +I FI L L K++++LY + S + Sbjct: 73 LSIIINK-------------DGIREIDNPSRLLLFIPLLLLFKNFPIKRKTILYAIPSSA 119 Query: 144 FLIAGYAMYINSIHENDRISFGVGTA---TGAAYSTMLIGIVSGVAILYTKKNHPFLFLL 200 + A++ ++ A +++ + + + Sbjct: 120 LITGCVALFQKFALGYEKPFPETMHIQMGNIAISLATFSIVITLHFFIKKQYKSTLFGFV 179 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYY-NKSPKKFTSSIVLLIAILASIVIIFN 259 + AL+ R + P++ L Y + K + I ++ L +++ Sbjct: 180 AIILAIMTSALSGARGGWIGLPVVVGIILFLYKEFINKKLIITLIAIITIGLTALITSPK 239 Query: 260 KPIQNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNL 318 I+ RYN A +D+ SY N TSLGAR M+E L ++P ++ E + Sbjct: 240 FGIEKRYNAAKSDIVSYLEKNNRNTSLGARFDMWENALIAIKEAPIFGHGSDGYDEFRHK 299 Query: 319 LVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA------ 372 V + L F + LHN+ +E+ +GL+G + + + + + K Sbjct: 300 QVKSKQMAKTTLNFGS--LHNQYLESWVKRGLVGFIALILIILTPIFYFIKNLNTHNLET 357 Query: 373 ----LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 + +I + + S + S I SA++ +V Sbjct: 358 KCICILGIIHIVSHIFYFTSQSFLAHNSGNIFYFSAMLCFIV 399 >UniRef50_Q1Q4N8 Similar to lipid A core O-antigen ligase related enzyme n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4N8_9BACT Length = 437 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 65/419 (15%), Positives = 130/419 (31%), Gaps = 45/419 (10%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 +I FF + + +T + CL ++ ++ + L +P+ +F I L Sbjct: 15 AFITYFFILTFFPFGADVIKMMCLVTMVGCLAYQMVLEKRIIFEKTALNIPILVFFIYL- 73 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 +I K F H Y+ FI +V + + + + L Sbjct: 74 -IIASIFSKNTKYCFETLLHDYVP---YFIIFFCMVNTIHSIEQVKRIIKAMLITCGLVC 129 Query: 145 LIAGYAMYINSIHENDRISFGV-GTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC 203 Y Y +DR+ + A Y ++ + I + Y F Sbjct: 130 AYGLYGYYTGIAARDDRLIATFKYHSRIAKYISLFLPIAICLFFYYRSIFVRFWLGCLVF 189 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQ 263 Y + LT +RA+ + + K ++ L+ +L + Sbjct: 190 VSGYAIVLTMSRASWFANMVAVIYIAFMLKKKYLLIAIIAMCPLLFVLLPSKYSMHAKTI 249 Query: 264 NRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE--SRAESMNLLVA 321 +Y++ + S LG RL ++ + I + P + + Sbjct: 250 TQYDKFFS---------SNKILGERLMCWKASIAIILDHPLLGIGPGKRNFRDIYETYRK 300 Query: 322 E----------------HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY 365 E + + S H HN I+ G+ G+ L+++ +FY Sbjct: 301 EIREKEKKSLGDIPAKTIKKKKVQKVESLSHAHNIILHMWVETGIFGLAIFLWMFTIIFY 360 Query: 366 IAYKKRA------------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 K +G+ + ++ GL+D+ + VL L+I Sbjct: 361 RTIKAIKSIAENRFEKMLLVGVSAGLVSLISHGLTDIFWKTPESLFLWQVIGVLFLIIQ 419 >UniRef50_A8T0D4 Putative O-antigen ligase n=1 Tax=Vibrio sp. AND4 RepID=A8T0D4_9VIBR Length = 425 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 71/415 (17%), Positives = 145/415 (34%), Gaps = 44/415 (10%) Query: 19 MILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSI 78 M+L + I CF M+I + + + + I + + +N L L Sbjct: 19 MVLMYLPLIWCFSGMLIYPSADKTQVILVLLAIISSFIVHDKKTIIDNVKQNQLAKFLLF 78 Query: 79 FLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYT 138 IG + L H Y ++ G + F + S ++ L Sbjct: 79 LTIGAVFL--------------KLLHGYSSSVIRAFSGLLLYFAFIPKSTFSSIKNKLPA 124 Query: 139 LYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLF 198 L LS +I+ + + ++ + + S + K + Sbjct: 125 LLLLSGIISFVYGFWFTYVLELGRAWSINPIPYSTVSVAIGVGSLYFLFSNASKQIQRMM 184 Query: 199 LLNSCAVLYVLALTQTRATLLLF-PIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 LL+ L V+ +Q R T L + + L A Y+K + + + LI I++ ++ Sbjct: 185 LLSFALSLNVIIFSQARGTALALCSVAALVILFAVYSKLEIRKQLTYIFLIVIVS--LLA 242 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 IQNR + N++ +++ +S+G R M++ + + + P + ++ Sbjct: 243 NTHLIQNRIDFTANEMQRIESSDMNSSIGLRFQMWKAAVYLIKEKPLLGYG-DDHKQAKQ 301 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFS---------------------- 355 LL + + A+ F+ H HNE I +L GL G+ Sbjct: 302 LLADQGIITQDAVPFT--HYHNEFISDWALDGLTGVVMLLLMLYLPFFLFKKTVQQHASG 359 Query: 356 --TLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 L Y ++++ + + LG L+DV +++ ++ Sbjct: 360 EKFTSLCRGGIRNPYIQQSIAGIFIVLGYAVAALTDVPFQHAVTISFYLASCAVI 414 >UniRef50_C2HRF0 O-antigen ligase n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2HRF0_VIBCH Length = 416 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 77/408 (18%), Positives = 150/408 (36%), Gaps = 23/408 (5%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQ-ENYNIKNLIL 74 K +IL+ I L FF + + + I++ I ++ L + + IK+ Sbjct: 14 KVKIILDCIFAYLPFFVSFLLIFNVPDTKYIWSRAVICSIVYLFIFHFDGFSVEIKSKGY 73 Query: 75 PLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKES 134 + LI L + + NS F T + + F+ L S L Sbjct: 74 LIVPLLIFCLYFFFMQYYNDGNSNFPRT-----------LCYIVLYFIVLPSHLIHI-HV 121 Query: 135 VLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH 194 + Y L + L + Y + N R+ F V ++ L+ I S + K + Sbjct: 122 LKYMLVLGALLSSFVGFYEFFMLGNTRVGFYVLNPIPISFYFGLLLIFSVWLSFESYKKN 181 Query: 195 PFLFLLNS---CAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAIL 251 L L+ + + LT+TRA+ + I+ ++ ++ S K S + + + Sbjct: 182 NILCGLSVVSSFLLFICIILTETRASWMALVIVFLSCIVYSIFNSNLKKKSIYLSSLLAV 241 Query: 252 ASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES 311 + NR +A + Y N N +S G R+ +++ GL++ K+P Sbjct: 242 IIGFGWNIPIVHNRIYDAYYQIEQYKNDNYNSSTGIRIKLWQAGLDMAKKAPLLGLHRVD 301 Query: 312 RAESMNLLVAEHNRLRGALEF---SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY 368 N + E F N + HN+ +++ G +G+ + F + Sbjct: 302 VQHISNAKIQEGKYPEFLRSFLIHPNPNFHNQYVQSFVNSGFIGLLFLIVFIFLPILVFI 361 Query: 369 KKRALGLLILTLGIVGIGL----SDVIIWARSIPIIIISAIVLLLVIN 412 K R + +++ I+ L D + + I S I++L + Sbjct: 362 KNRKINTTLISCAIIQFSLISLFFDSMFLYSHVVIFYCSIIMVLYYFS 409 >UniRef50_Q2L1I7 Putative O-antigen polymerase n=1 Tax=Bordetella avium 197N RepID=Q2L1I7_BORA1 Length = 420 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 56/412 (13%), Positives = 140/412 (33%), Gaps = 25/412 (6%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 + + + + + + + +T ++ + +L R + + + ++ + + Sbjct: 9 LLVAVLAATPTLLLITASGGSTAFYLTLLLSIAALGCREQALDLSAYRKLIVAACLPLAA 68 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 + LI + + L G ++ L + + + VL+ + Sbjct: 69 MLLIAVLHGSLSSIN--------LERGLRLALGMPLLLAGLQATGPQRLKHVLWGTLAAG 120 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF----LFL 199 ++ + + H ++R A +L G+++ ++ + + L Sbjct: 121 WVAIVSLIALIGTHLSERPLTPEYNAVSYGNLLLLFGVINLFSLSWPLTRYRRSEIAFKL 180 Query: 200 LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFN 259 L + +TQTR+ L PI AL+ Y + ++++ V + Sbjct: 181 LTTLVTFAGFIITQTRSGWLALPIFVALALLVYARFRHPLRLFAALIVVLAGLIAVGSLS 240 Query: 260 KPIQNRYNEALNDLNSYTNAN-SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNL 318 + R L +S+ RL ++ + + +P A + ++ Sbjct: 241 PALVKRVELGRQQLTECEANPLVNSSICVRLQLWRAAWGMMLDNPIKGVGASGFSPALQK 300 Query: 319 LVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL----- 373 + AE E HN++++A +L G+ G + L LY ++ A Sbjct: 301 MAAEGKVSPYVAE-DFGEPHNDMLDALALYGIPGGLALLLLYAIPAVFFLRRLAYDLPQQ 359 Query: 374 ------GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 +LG GL++++ + + I L V+++ N Sbjct: 360 VRAAAAMGASTSLGFAAFGLTELMFRGMRTLGLYVILIALFAVLSSAANGAR 411 >UniRef50_C8N937 Putative uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N937_9GAMM Length = 406 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 117/400 (29%), Gaps = 22/400 (5%) Query: 32 SMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSA 91 S F + ++K + LL L + + L G + Sbjct: 11 SATFLFFALSLAVKSGYSYGVALLLLAALITLPHWWPRRPREAALRWLAFGFFFAGSVAL 70 Query: 92 FKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAM 151 V S A K F + FL + L A Y Sbjct: 71 LDVIRSGIGA--RGLEAPLKFFAVPLLLYFLATVPPKGRAIWAGAACGALLGLASAWYYS 128 Query: 152 YINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLN-SCAVLYVLA 210 + + ML+ +++ ++ ++ L L A + Sbjct: 129 HFAPELLPAGRAARYLHPIQLGNIAMLLALIAACSLRARPRHWQLLLALAGIVAGVCTTL 188 Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII---FNKPIQNRYN 267 L+QTR + + + + S + + + + I+ R Sbjct: 189 LSQTRGSFFALAWTLFFLGLLSLRRRHFRARSVALSATIVAITAALFWLGNMDVIEERLA 248 Query: 268 EALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLR 327 A +D+ Y + TS+GAR M+ P L V + Sbjct: 249 AARHDIALYEQGKADTSIGARFEMWRFAWQEGSSYPLIGPGT------AQLNVDKDGWRS 302 Query: 328 GALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK----------KRALGLLI 377 A HLHNE ++A + +GL+G+ + L+L+ ++ + L Sbjct: 303 AADLAPFGHLHNEFLDAFARRGLLGLAAVLYLFLVPLWLYRRGEERDSPDAAALRLAGRA 362 Query: 378 LTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 L G L+ +++ + + + + L+ R Sbjct: 363 QVLLYSGFSLTQAALYSHNSGFLFFALPLCLIYAALRGEG 402 >UniRef50_A9BR10 O-antigen polymerase n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BR10_DELAS Length = 422 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 59/405 (14%), Positives = 124/405 (30%), Gaps = 38/405 (9%) Query: 30 FFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWY 89 ++++ + ++ L +L R Y N L +G+ + ++ Sbjct: 15 LAAILVPGLALWLRSGYSYGAGLMVLGALCFLPRWVRYRQSNGTWLLVALFLGMAVMWYF 74 Query: 90 SAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGY 149 + + ++ A +F + L AG+ Sbjct: 75 LSVLDGGTGQFDRPVKFILGAVSLLFAMCY----------PPTARIFLWGIPLGSAGAGF 124 Query: 150 AMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA----ILYTKKNHPFLFLLNSCAV 205 + G A +L+G S + L L + Sbjct: 125 MALWQVCVLGMERATGYTNAIQWGNMALLLGCFSCIYAVSFWHQRSLLWRLLVLAAAALG 184 Query: 206 LYVLALTQTRATLLLFP--IICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQ 263 L+ +R L + L+ Y I + + V+ F + Sbjct: 185 ALASLLSGSRGGWLALLPMFFMLMVLVRMYRPQYFGRLLLGCAAIVVALATVMAFIPRVS 244 Query: 264 NRYNEALNDLNSYT-NANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE 322 R +E D+++Y NS TSLG RL Y + + + + P + + M+ VA Sbjct: 245 ERVDEVYLDVSTYLYAGNSNTSLGTRLEQYRLAVQMIGEKPLLGWGMQGYVDEMHRRVAA 304 Query: 323 HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLL------ 376 + + E++ + HN+ ++ G+ G+ L+ SL ++ + R L Sbjct: 305 GSYGQSIREYNFI--HNDFLDIWVKLGVPGVLLQAALFISLLWLFWPSRRRMALWPADST 362 Query: 377 -------------ILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 ++ + G+S S + + +V L Sbjct: 363 PWREALLLRILGSLMPAMYLAFGMSQQFFVHNSGIVFFVFLVVAL 407 >UniRef50_C7M4U7 Tetratricopeptide domain protein n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M4U7_CAPOD Length = 829 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 46/435 (10%), Positives = 121/435 (27%), Gaps = 36/435 (8%) Query: 14 TLKSSMILEIITYILCFFS--MIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKN 71 L +S++L Y+ M F +V L+ I R+ + Sbjct: 29 KLLASVLLIAYGYVTVLTPNWMAFDSNATKFYTFAILNLIVVGLVFFIKEFRERTQLLFG 88 Query: 72 LI---LPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQL 128 + ++ LI +L L ++ + + + ++ + +++ + Sbjct: 89 FFTNKIGIAYCLIMVLALFSFTKAIDIEEAILHFFKIFTAFSAAWMVSALVIYNKKSLVH 148 Query: 129 KSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAIL 188 + ++L L L + I +I + I A + + + Sbjct: 149 LAVAMTILLCYDFLVTLDGVKGI-IKAISADYNIKGSYSNKNILASAMFIKIPFAIWLFY 207 Query: 189 YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAAL-------IAYYNKSPKKFT 241 + K + + + TRA L + + + + Sbjct: 208 FQKNTLRIIGGIGVLVGTLAIFFMSTRAFYLATILTTLIFITYGAIDYFILKRRETGVKV 267 Query: 242 SSIVLLIAILASIVIIFNKPI---QNRYNEALNDLNSYTNANSVTSLGARLAMY-EIGLN 297 V L+ + I + Q R + + + TS R + + Sbjct: 268 LMHVGLVVLAFGIFSFVQNYLYPQQVRQSTSFGARLAEVANQENTSNNLRKTAWVITTTD 327 Query: 298 IFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTL 357 + P + ++ + + HN+ +E + G+ + L Sbjct: 328 MIPNDPLLGVGIGNWKVRFLQYENSYSPHYIYMYKN----HNDFLELTAEAGIFAGLAFL 383 Query: 358 FLYFSLFYIAYK--------KRALGLLILTLGIVGIGLSDVIIWARSIP-------IIII 402 ++ Y + ++ + G+ + + P I + Sbjct: 384 AIFLLAAYYFLRGTYKNKNPEQEQWFFLPLFGLFAYSFDAFFNFPQDRPEIQALFGIYVG 443 Query: 403 SAIVLLLVINNRNNT 417 A+ L ++ ++ Sbjct: 444 IAVGLAVLYFSKKKG 458 >UniRef50_A1HMD6 O-antigen polymerase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMD6_9FIRM Length = 408 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 60/412 (14%), Positives = 130/412 (31%), Gaps = 32/412 (7%) Query: 8 HSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENY 67 + I+E I Y L +A + + S + ++ ++ ++ Sbjct: 11 QLSNTSCVIQKNIIEKIIYFLLIAYAAVATISISASNIVISLALVLAIIHYAKYPTTNLG 70 Query: 68 NIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQ 127 K L+ + FL + V + + + + + Sbjct: 71 IDKGLLKAILFFLFAMF---------VSAVFAYNPALGFPEIGHTAYRTAPLFLASSFIK 121 Query: 128 LKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAI 187 K + +L L + + YA+++ G A Y LI ++ + I Sbjct: 122 DKRQLWIILLVLIAAFTVNNFYAIWLGVNGNLRASGIRGGPMILAGYLVQLIPLIFILFI 181 Query: 188 LYT-KKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 L L TR + + A I ++ K +++ Sbjct: 182 NNICNTKDRRFLGLAIFIAFLALLFNGTRGAWIAVAAVLFAYAILQVRRNTKLSLVALLF 241 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 LI ++ + N+ +R + S RL M++ ++F+ P + Sbjct: 242 LIVLII--SLFSNQMFYDRVKTITDITFQ--------SNSERLLMWQSAWHMFLDHPLTG 291 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 + + + A E H HN + + GL+G + +++ + + Sbjct: 292 VGTGNYGDLYQI----KYISPQAQEPFQRHAHNNFFQVLAEYGLIGFIAFSYMFGYILFN 347 Query: 367 AYKK--------RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 AY K AL +++TLG++ GL++ I + + L Sbjct: 348 AYVKLRDNQNNIWALAAILVTLGLLVQGLTEYNFGHSVIMRLYWFLLGLFYA 399 >UniRef50_A2TSG4 TPR domain protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TSG4_9FLAO Length = 798 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 50/431 (11%), Positives = 126/431 (29%), Gaps = 40/431 (9%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 +++ + C S+I F + ++ LL LI + ++ + Sbjct: 13 FKLLIVLYCIISIIPRFEAIDPIGSQWFYFGVINLLGLIFFYNNRTLGVLRTSSRVAFWF 72 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 G+ + + + + + + + L Sbjct: 73 FGIYLVFFVACLASIFGSLNISEGVKDIARVGITLVGVFNLYLIFKVAPHRLFAFLVKTL 132 Query: 141 SLSFLIAGYAMYINSIHENDRISFG---------VGTATGAAYSTMLIGIVSGVAILYTK 191 ++ + G + + I G G+ A + +L Sbjct: 133 HVTVFVVGIQIIFHFIDNWSVPRTGTLVKETELLFGSQNVTAAFLSITIPFIISGVLKHA 192 Query: 192 KNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKS-------PKKFTSSI 244 + LL L R +L +I +I + + + Sbjct: 193 GRWRVMSLLTLFVSFTALFYVGARTAVLSATVIFSLLIIYFIIDGVRSGALVQRLKYPLL 252 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSL--------------GARLA 290 ++ ++A +++ N +R YT ++ + G R Sbjct: 253 PIIGILIAGFLLVTNSNRLDRSKANSYKNILYTKSSVQNATLAPAPVQAGLSKIAGIRSL 312 Query: 291 MYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGL 350 Y++ ++ F +SP + A +++ + +HN+ ++ + G+ Sbjct: 313 YYKMAMDDFKRSPLVGIGLGNWKLGNKD--AYYSQSNRDRFLYPLRVHNDFLQILAEAGI 370 Query: 351 MGIFSTLFLY----FSLFYIAYKK----RALGLLILTLGIVGIGLSDVIIWARSIPIIII 402 +G + L+ + + +K + L+L L ++ GL I + I Sbjct: 371 LGFIPYVLLFMMLSGGILLLFFKNQDSEKRWTFLVLALALIAYGLDASINFPLERTPIQG 430 Query: 403 SAIVLLLVINN 413 +L +I + Sbjct: 431 LFAILAALIIS 441 >UniRef50_B3ELM8 O-antigen polymerase n=1 Tax=Chlorobium phaeobacteroides BS1 RepID=B3ELM8_CHLPB Length = 398 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 67/388 (17%), Positives = 125/388 (32%), Gaps = 30/388 (7%) Query: 33 MIIAFVDNTFSIKIYNITAIVCLLSLILRGRQE-----NYNIKNLILPLSIFLIGLLDLI 87 ++ FS+ + NI A + L I RG + K ++ L + L+ Sbjct: 16 IVFFGFIFPFSVAVGNIVAALITLLWIFRGNHKENWASLKGNKFVLATLCFVALYFAGLL 75 Query: 88 WYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIA 147 W K + +F+ + + + + ++ Sbjct: 76 WTLDIDS----------GIRTLQKESVLLLIPIFMLFIQKKHLHRYIFAFLISISCMVLL 125 Query: 148 GYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILY-------TKKNHPFLFLL 200 +A+Y I T + S ++ +L+ K + LF L Sbjct: 126 SFAIYYGIIPPLSGAKQSDPTPFMSHISYNPFLTIAIYLLLFLILFDDTQSKRNKILFSL 185 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 + +T+ RA +F + + Y+NK KK +L+ ++ SI + Sbjct: 186 VVLIFSINMFITKGRAGQAMFFAMIFITTVQYFNKQRKKGLLVAAILVPLILSIAYSTSD 245 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 NR N + D+ Y N TS G RL E I +P A + Sbjct: 246 NFSNRMNAIVGDVQKYQENNKKTSTGLRLVFAENSFEIIRNNPVFGVGTGDFAHEYEKIN 305 Query: 321 AEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR----ALGLL 376 ++ E + HN + G++G+ S L L F ++ + L Sbjct: 306 NKNTPELRPTE----NPHNMYVLTTVQLGIIGLVSLLSLLFFQTQLSTSSKIDFQKKFGL 361 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISA 404 L + I LSD + ++ + Sbjct: 362 TLPILFGIIMLSDSYLRGHYTTMLYVYF 389 >UniRef50_A8F5A6 O-antigen polymerase n=1 Tax=Thermotoga lettingae TMO RepID=A8F5A6_THELT Length = 1028 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 62/438 (14%), Positives = 135/438 (30%), Gaps = 50/438 (11%) Query: 20 ILEIITYILCFFSMIIA--FVDNTFSIKIYNITAIVCLLSLILRGRQENYNIK-NLILPL 76 I EI ++ + + A FV FS+ Y + + L+ I + + L Sbjct: 4 IEEIFLHVTVIITALFANKFVTYEFSVPKYAVLTTMVLILSIGLIFRWWKEKQLKLYFSF 63 Query: 77 SIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVL 136 S L L + R + ++ A + I + + L Sbjct: 64 SHLFWFLFSLSSILSTISVYRYNRFYFRYSIDIALFVVLSVLISLYISNRFKSKESITRL 123 Query: 137 YTLYSLSFLIAGYAMYINSI-------------HENDRISFGVGTATGAAYSTMLIGIVS 183 + + + ++ +N I +G A ++ + Sbjct: 124 FLTFIATGVVVAIDAILNFYTGRSIFLGVVGEPFSRAAIKSTIGNTIFVANYMTMLLVSC 183 Query: 184 GVAILYTKKNHP-----------FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAY 232 +L ++ L + ++QTR+ + I Y Sbjct: 184 LYFLLSDNYGWKNLSRKGFLFVKIFSMVAFWLFLTTVVISQTRSEYISMIFSVAVFAILY 243 Query: 233 YNKSPK------------KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN 280 + S K I +LI +A I++I+N ++ + ++ Sbjct: 244 FVYSRKTKTDDDVHNWKNLKKLLITILIFGVAVIMVIYNTDNPLTGGGKVSVTSRFSAMT 303 Query: 281 SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHL--- 337 SV+S+ RL + + + ++ + ++ + + R L + + Sbjct: 304 SVSSIDERLLAWLGAIYQWKENKLIGTGIGTYQIKAIDILQDVMKDRPELLYGWNNFKRT 363 Query: 338 HNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA--------LGLLILTLGIVGIGLSD 389 HN+ ++ G+ G+ S L L SL A+K L L + G + + Sbjct: 364 HNDYLQVLGETGIFGLISVLLLMLSLIIYAFKYLKTVERKDDLLLFLTIACGFIAFMVQS 423 Query: 390 VIIWARSIPIIIISAIVL 407 + + + A+ L Sbjct: 424 FFSFPGHLLPNSLLALFL 441 >UniRef50_Q01Z28 O-antigen polymerase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Z28_SOLUE Length = 405 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 45/377 (11%), Positives = 115/377 (30%), Gaps = 51/377 (13%) Query: 67 YNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTS 126 + + LPL +FL+G + + +S P + ++F L S Sbjct: 48 LRLPRIKLPLGLFLLGTIISLAFSDNPAAGLPQIRKF--------YVFLELLVIFSLLRS 99 Query: 127 QLKSKKESVLYTLYSLSFLIAGYAMY-------------INSIHENDRISFGVGTATGAA 173 + + + + G+ + + +RI+ + Sbjct: 100 VEMVRLLFLSWAGIGAVTAVRGFVQFASKVQEAHRLGRNFYDFYVGERITGFTSHWNTYS 159 Query: 174 Y--STMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 I +V+ + + +L+L+ +L + L +TR + + + + Sbjct: 160 AEEMFAFIMLVAFLLFAPGTRKRLWLWLICGALILIAIVLGETRGIWIALAVAGLYLVWF 219 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 + ++ A+ + + +Q R+ SV S R+ Sbjct: 220 WKRW-------MVIAAPAVALLGIALAPSAMQERFTSIF-------KPKSVDSNQFRVVT 265 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 + GL + P+ E V E + HLHN + + +G+ Sbjct: 266 WRTGLRMVKAHPWLGLGPEEPHLQFEKYVPEDIPRPLPSGW-YGHLHNIYLHYAAERGIP 324 Query: 352 GIFSTLFLYFSLFYIAYKKRAL-------------GLLILTLGIVGIGLSDVIIWARSIP 398 + L++ + Y ++ + G + L + G ++ + + Sbjct: 325 TMLVLLWMLLQILYDFWRGLRILPPGPSNRRFLLHGGIAAVLATMAEGFVELNLGDSEVL 384 Query: 399 IIIISAIVLLLVINNRN 415 + + + + ++ Sbjct: 385 TMFLVIVACGYLALEKD 401 >UniRef50_A1SRW5 O-antigen polymerase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SRW5_PSYIN Length = 579 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 130/386 (33%), Gaps = 35/386 (9%) Query: 48 NITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYL 107 N+ I + + L + K ++ L+ L + F +N +Y Sbjct: 41 NVVWIFFSVLISLGLWKITVQQKIFYSRFTVVLLSAFILFYIPLFYPNNELADQSYTRL- 99 Query: 108 NTAKIFIFGSFIVFLTLTSQLK--SKKESVLYTLYSLSFLIAGYAMYINSIH-------- 157 I +F ++F++L E +L + F+ A Y++ + + Sbjct: 100 ----IGLFAGILLFISLQQFQFDKKNLEKLLLLIVLAGFIQACYSLMQDYLLPANNIFGY 155 Query: 158 --ENDRISFGVGTATGAAYSTMLIGIVSGVAILY-TKKNHPFLFLLNSCAVLYVLALTQT 214 R A I++G + K LL++ ++V+ +T + Sbjct: 156 DVGYGRPYGIFQQPNVLASFMATTLILAGYLLQQIKDKKLQIFLLLSALLNMWVITITVS 215 Query: 215 RATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLN 274 R L I V + + S +KF I+ + L + R ++ Sbjct: 216 RTGYLGLLIAFVLFIPWAWQSSKRKFGIFILAIFLGLGLASTKGGDILGKR------NIA 269 Query: 275 SYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE--HNRLRGALEF 332 + T G RL Y ++ K P ++ + AE N Sbjct: 270 NMTEG------GGRLTHYSNSWDMIKKHPLIGYGYGGFEKNYLINTAERVKNSKSKPEHQ 323 Query: 333 SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR---ALGLLILTLGIVGIGLSD 389 H HNEI+ G++ I + L L + ++ K R A+ L L + I ++ Sbjct: 324 HLTHPHNEILFWAIEGGVVPIVAILLLVIAFIHLLGKFRLTHAMALSTLVIPIAVHTQTE 383 Query: 390 VIIWARSIPIIIISAIVLLLVINNRN 415 + ++ +++ +V + + N Sbjct: 384 YPFYHSALHWLVLLVLVFYIDSQSEN 409 >UniRef50_A9B578 O-antigen polymerase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B578_HERA2 Length = 501 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 97/318 (30%), Gaps = 22/318 (6%) Query: 114 IFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAA 173 ++ + + S ++ + + L F AG ++ + ++ RI+ +G + Sbjct: 178 MWALLFAGIFMASITTWQQLTGTFENDYLGFAKAGKMQIVSGVEDDYRIAGPIGDPNFYS 237 Query: 174 YSTMLIGIVSGVAILYTKKNHPFLFLLN-SCAVLYVLALTQTRATLLLFPIICVAALIAY 232 + + + + K F + + + + +R L I + + Sbjct: 238 QVLLTLIPLGMDRMWNEKNKKLRWFAIWQLSVCMASIFFSFSRGAFLSLSIASLIMFV-- 295 Query: 233 YNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN--SVTSLGARLA 290 S++++IA+ I+ R + + + S R + Sbjct: 296 ---RRPPKPLSVIIIIALGFVIIPTLPASYIARLETIPEAIPGLAQEDVRNEASFRGRSS 352 Query: 291 MYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGL 350 + GL +F +P + + L + HN +E + KGL Sbjct: 353 AQQAGLRMFWANPVFGLGVGNFGNHYQEYARD---LGLDNSRWDQAPHNMYLEILTEKGL 409 Query: 351 MGIFSTLFLYFSLFYIAYKKRALG-----------LLILTLGIVGIGLSDVIIWARSIPI 399 G+ + + LF + R + G+VG + + + Sbjct: 410 FGLSVFSAMMWVLFRDMNRARKKFREINMGDFDGLIFGFQAGLVGYMFAGIFLQLSYPRF 469 Query: 400 IIISAIVLLLVINNRNNT 417 I + + N N Sbjct: 470 FWILIAIAYAIPNVANKA 487 >UniRef50_B6EPB7 O-antigen ligase WaaL n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EPB7_ALISL Length = 408 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 67/419 (15%), Positives = 129/419 (30%), Gaps = 34/419 (8%) Query: 17 SSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPL 76 + L +I ILCF + S + + + L L+ + N + L Sbjct: 2 KKISLPLIATILCFL-FFSTPIIYPDSYVVAPLLLALFGLFLLPKTYHAFKNRDVKYISL 60 Query: 77 SIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVL 136 S+ +L +I + + S ++ + + FL + Sbjct: 61 SMVGYFILTIISFLYSGGETS-------QLDMPSRTVLASFILCFLVTYKPNPAPLFLAA 113 Query: 137 YTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP- 195 +++ I+ Y + I + + S ++ Y +K Sbjct: 114 PIGAAIAGFISFY--HSFYIGGCAFVGTFGYMPIQIGGIIASLATFSVISFFYYRKTEQK 171 Query: 196 ---FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILA 252 + + L+ R LL P + + L KK +L I Sbjct: 172 NFAVFSFVAANLGYIATLLSGARGAWLLTPFVLLIVLYLNKELINKKIVGYALLAAIIDL 231 Query: 253 SIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESR 312 SI + I +R + +DL Y+ S +S GARL M++ L +SP + Sbjct: 232 SIA---SAQITSRLDAIQSDLTQYSAEQSASSSGARLEMWKSALYSAQESPLFGQGFSGI 288 Query: 313 AESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA 372 + + AL++S HN+ +E KG+ G+ L ++ F + Sbjct: 289 EAAKQRQLDAGLIDPIALKYS--RAHNQYLEDLQTKGIFGLSVLLIMFAVPFAFFKRNLK 346 Query: 373 ---------------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 L + G L+ + S + I +L + Sbjct: 347 QYINDSDKDTHYFLALMGASHVALVAGYALTQHYLSHHSGILFFAVGIAILSALVINQR 405 >UniRef50_Q4KJB3 O-antigen polymerase family protein/toluene tolerance protein n=2 Tax=Pseudomonas fluorescens RepID=Q4KJB3_PSEF5 Length = 620 Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats. Identities = 50/405 (12%), Positives = 124/405 (30%), Gaps = 49/405 (12%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGR--QENYNIKNLILPLSIFLI 81 I Y+L +M + Y + +I L++L R + I L Sbjct: 24 IGYLLLLCAMFFLPGRSGLHKLYYGLFSIPTLIALCTRPSELKSLLREPVFIAMLLFCTW 83 Query: 82 GLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYS 141 ++ L W + H+ + +F ++ + ++ + Sbjct: 84 AIVSLAWSPPVDSVLGEIKTPLHT------LMLFAGCMLLVRYRGEVLQPLVFCAAIVAL 137 Query: 142 LSFLIAGYAMYINSIHENDRISFG-VGTATGAAYSTMLIGIVSGVAILY-TKKNHPFLFL 199 ++ + Y E I G +++ + + + +L + Sbjct: 138 IASIFNLYVFVRYHTPELRMIGAGAFDNPLLSSHVFGFFCVYWLCLSMNCRRYQILWLSV 197 Query: 200 LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFN 259 ++ L T +R L+ +AAL + ++ + ++A ++V +F+ Sbjct: 198 PALVIMVAALIATGSRTPLVAL---TLAALWLSFISWNRRSLMLLGGMLAGGIAVVALFS 254 Query: 260 KPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 + + R + +R ++ + L P+ Sbjct: 255 QMLLERGSS------------------SRFDLWRLALEQIANHPWIGHGY---------- 286 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILT 379 L + F HN + G++G+ LF+ + +++ RA LLIL Sbjct: 287 -NASLSLDPGIGFLLQEPHNFALGVLYYVGIIGLLPWLFMQAWALFKSWQLRAEPLLILA 345 Query: 380 LGIVGIGLSD-------VIIWARSIPIIIISAIVLLLVINNRNNT 417 + G+ ++ + ++ + L+ + Sbjct: 346 STWLMFGIGAGLTEGGGILSRPKEHWFLLWIPLALIAALCISQRA 390 >UniRef50_D2RIJ5 O-antigen polymerase n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RIJ5_ACIFE Length = 399 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 44/384 (11%), Positives = 115/384 (29%), Gaps = 28/384 (7%) Query: 38 VDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNS 97 + + + + L+ +Q + + + + + L L + Sbjct: 26 ISMALGEVLNGLVLLFGLILYYYNRKQIHLSPELKGYLKAYLIFVLCTLPSVIFGGNVSK 85 Query: 98 PFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIH 157 + + +F +VF+ L + + + FL ++ + Sbjct: 86 GVHEFLQ--MWVWRFVVFLPIVVFIKKRDYLINMLTAYMAVFGVDCFLTLIQVLFH--LG 141 Query: 158 ENDRISFGVGTATGAAYSTMLIGIVSGVAIL--YTKKNHPFLFLLNSCAVLYVLALTQTR 215 NDR G+ G A ++ ++ + IL +K + + L ++R Sbjct: 142 NNDRGWGLGGSQLGIASIMCMMLPITFIIILDSSFEKRLKNVARVTLICNWIGLFCNKSR 201 Query: 216 ATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNS 275 L I+ + Y S K +++ + + + + ++ + R+ Sbjct: 202 GAWLSNMILVPVSAWNYIKHSKK--ALAVIAVFFLASGVFMVSSPKYLKRFES------- 252 Query: 276 YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV 335 N + S G R+ ++ + + P + + Sbjct: 253 IANTTTDRSNGDRIVAWKSCIQMVKDHPLTGIGLGRWGKVYGTQY-----WTPEDTQKLP 307 Query: 336 HLHNEIIEAGSLKGLMGIFSTLFLYFSL----FYIAYKKRALGLLILTLGIV----GIGL 387 H H+ + G++G+ L+ F K + L+ + + G Sbjct: 308 HAHSNYFHILAETGIIGLLGLLYFTVYFVSRSFINWKKNKNPYDLMACISFLGYVVFFGQ 367 Query: 388 SDVIIWARSIPIIIISAIVLLLVI 411 + + S I+ +L+ + Sbjct: 368 IEYTLDLTSGVRIMWFLEAVLISL 391 >UniRef50_Q1ZGS6 Putative O-antigen ligase n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGS6_9GAMM Length = 413 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 61/416 (14%), Positives = 134/416 (32%), Gaps = 17/416 (4%) Query: 7 LHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQEN 66 + LK + + + + S+ I + + ++ L ++ ++ Sbjct: 8 FYKLKKTYSNQQFLYHLYSVLPFLLSLTSILWFRNGHKSIVIVALVYLIIRLFVQSKKII 67 Query: 67 YNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTS 126 L L+ + I+ + S + L +T Sbjct: 68 TTNIYNNPWLKYILLLSIFSIFNYCYNSTGSIEVRSLLVVFTL------------LLVTP 115 Query: 127 QLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA 186 + +S+ Y L++ + I +Y I +R + V A + + Sbjct: 116 KKTFNLKSLQYLLFAGAVNITAIIVYYQIIEPTNRFDWPVNAIPLATIAAFFSISSLTML 175 Query: 187 ILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 I K H + ++ Y LT++R ++ II + Y +S K + + Sbjct: 176 INNIKNKHKAILWISLILSTYATLLTESRGPIIALIIILGLSGYYYLLRSKKLIVKVMAI 235 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 + ++ + + R + +N++ + TS+G RL MY++G + + P Sbjct: 236 ALVVVIG-FLSVKPYMSARITQTINEVKHLEKGDFSTSIGLRLQMYQLGWTLIKEKPILG 294 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 + +N L+ + + HN IE G++G + L+ Y+ Sbjct: 295 YGK-TLQPKLNDLLDKKQITPSVHRVVSWTFHNNFIEKQVNSGILGSLLLMSLFIYPIYL 353 Query: 367 AYKKRALGLLILT---LGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 K + ++ L D II + I + + N I Sbjct: 354 TKKHSPVIKCLVINISLLYFLCSFVDTPFTTGQSLIIYLIMIGYIERAGSNLNNIQ 409 >UniRef50_C6DZV8 O-antigen polymerase n=1 Tax=Geobacter sp. M21 RepID=C6DZV8_GEOSM Length = 437 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 59/380 (15%), Positives = 123/380 (32%), Gaps = 29/380 (7%) Query: 42 FSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRA 101 K++ A++ L + ++ L + I++ L+ IW+S + + + Sbjct: 49 IVFKVFIGAAMISFLRNPGGRLTSAFACRDFWLIIWIWVALLVS-IWFSPYPTNPLAYEF 107 Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR 161 +++ L ++ + ++L L+ N E Sbjct: 108 ANEFLKLAVLLWLVLGL---LHSEERIVHYERTMLGAFSFLALWGVEQHFRGNERLEGLG 164 Query: 162 ISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLF 221 + + AA + + +A+ ++K +L S A+L + TQ+R L Sbjct: 165 GAAFGDSNGVAAILVLAFPLALNLALHSSEKRERWLGWGASAAILLAVIATQSRGGFLGL 224 Query: 222 PIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANS 281 + + K I++ +L + NR + + Sbjct: 225 SVAAAVFFLHSRKKKQ-----LILITSVLLGVAALFVTDGYLNRMSTITAE-----EEER 274 Query: 282 VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHN----RLRGALEFSNVHL 337 S G+RL +++ G+ +F +P S + +LR Sbjct: 275 DLSSGSRLVLWKAGMMVFRDNPIIGTGFLSFPIAKQEYKDAVPNVDEKLREYSFRGYKVS 334 Query: 338 HNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA-----------LGLLILTLGIVGIG 386 HN ++A S GL L + R L L + GIVG Sbjct: 335 HNSYVQALSEGGLFLFVPYALLILGCLWGNRALRRAKRDQAEHRLMLLLNGIEAGIVGYC 394 Query: 387 LSDVIIWARSIPIIIISAIV 406 + V I A ++ ++ + +V Sbjct: 395 VCIVFINALTVVLLPVQIVV 414 >UniRef50_A1AXG4 O-antigen polymerase n=1 Tax=Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) RepID=A1AXG4_RUTMC Length = 411 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 63/413 (15%), Positives = 154/413 (37%), Gaps = 18/413 (4%) Query: 14 TLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLI 73 ++K I+ L SM + ++ + ++ I+ + + + L Sbjct: 4 SIKYPNIVRFTFLQLTVLSMPLFVLNVKYMSELIIFILIIFGIYFSTYEKVLPFMHDQLK 63 Query: 74 LPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE 133 L + + L ++ + S H F + + Sbjct: 64 LYSYLIFVFFLSIVMSVILSDNPS------HGISKIGSNIHFLVAPFVAYSIFKCNVNFK 117 Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193 ++ + + + YA+Y NS DR+ G + T + + V+ + + Sbjct: 118 HMVLAIKLSIIIGSIYAVYQNSYLGIDRVEAGADSPTIFGFIMVFFAFVAIIDVWSQTNK 177 Query: 194 HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKS-PKKFTSSIVLLIAILA 252 L Y + L+ TR + ++F ++ + + ++ + K ++++ A++ Sbjct: 178 EKLFSFLIFLLASYSIILSGTRISWMIFLVLFFSVIFIWFIQGCLTKKGLLLIVVTAVIT 237 Query: 253 SIVIIFNKPIQNRYNEALNDLNSYT-NANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES 311 ++ I +K + +R N A ++ +++ N NS S+ RL+M+ GL F + P ++ Sbjct: 238 TVFFIHSKQVNDRINVAFEEIKTFSKNKNSYGSIDLRLSMWRGGLAAFKQQPIIGYGYQN 297 Query: 312 RAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK- 370 + + + L LHN+ I + G++G+ L L F I +K+ Sbjct: 298 TGLAASRYTS--GSYEKGLIKGQKMLHNDYINSLVGFGIVGLLVLLMLLFLPLAIFFKRL 355 Query: 371 -------RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 + L+ + + ++D I + ++ + +LL + ++ Sbjct: 356 RTNKDFTKNAIGLLFIIALSVYAITDSIYSHNVMRSFVVFFLGVLLPVPTKSR 408 >UniRef50_Q12AK2 O-antigen polymerase n=1 Tax=Polaromonas sp. JS666 RepID=Q12AK2_POLSJ Length = 738 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 47/365 (12%), Positives = 117/365 (32%), Gaps = 48/365 (13%) Query: 19 MILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQ----ENYNIKNLIL 74 +I + +++ + I A + L ++ + + Sbjct: 38 IIFACMLFLVAAIGAPYEEMLQDTLKSIVVSFAALGAGLLFFWRQRQRHEYFHWHALMGF 97 Query: 75 PLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKES 134 PL++ L ++W + R + S +++L L + + K S Sbjct: 98 PLALMAYALGSMVWSHTYLAGVEAIR------------WFIFSLLLWLGLNTFTREKSPS 145 Query: 135 VLYTLYSLSFLIAGYAMYIN-----SIHENDRISFGVGTATGAAYSTMLIGIVSGVAILY 189 + + +++ + + + + + + A + S + I Sbjct: 146 LFWGIHAGAVVASLWTALQFWIDFRFFSQGPNPASTFVNRNFFAEYVVCTLPFSALLIAR 205 Query: 190 TKKNHPFLFLLNSCAV-LYVLALTQTRAT----LLLFPIICVAALIAYYNKS-------- 236 K +L + A + L +T TR+ +L ++ A Y + Sbjct: 206 AGKPQEIAWLTFTTAFNIVALLMTGTRSALATLWVLLFLVLPLAGFFYRRQLACFAWNLT 265 Query: 237 PKKFTSSIVLLIAILASIVIIFNKPI---------QNRYNEALNDLNSYTNANSVTSLGA 287 + +++L+ + ++ N I R + + ++ SL Sbjct: 266 QRLAVIALLLVTIVGLGLIHTGNPKIAGELNGRNALERGIFRTVSVVTDSDEFRTGSLSV 325 Query: 288 RLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSL 347 RL M++ + P S A + + L ++L ++ + HNE ++ + Sbjct: 326 RLTMWKATGRMIQDRPLSGVGAGAWEVNGPLYQTAGSQLE-----TDYYAHNEPLQLLAE 380 Query: 348 KGLMG 352 GL+G Sbjct: 381 YGLVG 385 >UniRef50_C9R1T3 RfaL protein n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R1T3_AGGAD Length = 437 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 57/401 (14%), Positives = 141/401 (35%), Gaps = 19/401 (4%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 T + F +++ ++ I ++ ++ + L + N Sbjct: 33 TLVFFFTCLLVLKHGYNYTPAILSLMGVIFFIYRQLCKPKGNLTHDGNEKW-----FVAT 87 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 L + F + + + N ++I F + + L + + ++ Sbjct: 88 LLFYVLLFALSILYHQGKIREFDNPSRILFFLTLLPLLAHYPIRFNWLLHAIPWGSLIAG 147 Query: 145 LIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCA 204 + A +I + + + + A M +S + + + L+ + S Sbjct: 148 ITAIIHRFILNYYMAFEYQMHIQSGDIAMSLGMFSLAISFYFFIKRQYHFGALYFVFSLM 207 Query: 205 VLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILA-SIVIIFNKPIQ 263 ++ L+ R + P + + L AY KKF + +++A++ ++ ++ N I+ Sbjct: 208 GVFASLLSTARGGWIGIPFVLLLILFAYRRYLSKKFVAGFFIVLALIVTTVAMLPNTKIK 267 Query: 264 NRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE 322 R A D+ +Y N TS+GAR M++ + + + P + +E L + Sbjct: 268 ERIAAAEYDIIAYFQQNNGSTSVGARFDMWKSVMLMTQEKPIFGWGVQGVSEKRKLQYEQ 327 Query: 323 HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK----------KRA 372 + A F+ H HN+ + S +G +G+ + L ++ + + Sbjct: 328 GLISQYAAAFN--HAHNQYFDDLSKRGALGLLALLGVFLVPLRFFIRHLKSVDLELKLVS 385 Query: 373 LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 L + + ++ S S I +++ + Sbjct: 386 LLGAVHIVSVMFYCFSQGFFSHNSGNIFYFFPVIVFYALVK 426 >UniRef50_C2FRP7 O-antigen polymerase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FRP7_9SPHI Length = 718 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 44/388 (11%), Positives = 122/388 (31%), Gaps = 51/388 (13%) Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 +S+F ++ +++ S F + + + + + ++ L + + Sbjct: 91 VSLFFKQIIPILFISFFVLSG---ISIFAGLNKVEGLLEYAAYTTTLISFLNIFTLIFLA 147 Query: 136 LYTLYSLSFLIAGYAMYINS---------------IHENDRISFGVGTATGAAYSTMLIG 180 + +S ++ +Y + I + G + ++ Sbjct: 148 KDNIKVISIIVTCIVLYQSGAELYKFIREVNTLPLWEAILNIKWTTGNKNIFGATLIVKL 207 Query: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA-----LIAYYNK 235 L TK ++ LL L L RA + +I + ++ + ++ Sbjct: 208 CFVVYTFLRTKGIFRYIALLTYFIALLTLFFISARAIYISSTLIILFITLGTTILYWKSE 267 Query: 236 SPKKFTSSIVLLIAILASIVIIFNKPI---------------QNRYNEALNDLNSYTNAN 280 +LI++ +I +K + Q++ + + + Sbjct: 268 KRNSTLLHNAVLISLFIISFLIVDKTLTKYSKDGSDKQINTEQSQSSSFIEERAQTITDF 327 Query: 281 SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNE 340 + RL M++ L + P + + + ++ ++ HN+ Sbjct: 328 DNSGTNIRLFMWKASLEGIKERPLLGYGLGNYKIESSRITGKYYTSNVFNRYN----HND 383 Query: 341 IIEAGSLKGLMGIFSTLFLYFSLFYIAYK---------KRALGLLILTLGIVGIGLSDVI 391 ++ G++ L+ F K +R +++ GI+G + V Sbjct: 384 FLQVAFESGIITGLLYFGLFVFAFIYTLKILFKKEYNQERKFAAILIFSGIIGYFIDSVF 443 Query: 392 IWARSIPIIIISAIVLLLVINNRNNTIN 419 + + P + I ++LL + ++ Sbjct: 444 NFPLARPNMNIMFVLLLAMTIANYVSVK 471 >UniRef50_C6MBK9 O-antigen polymerase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBK9_9PROT Length = 396 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 53/338 (15%), Positives = 109/338 (32%), Gaps = 4/338 (1%) Query: 83 LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSL 142 L I + + + F + K + L L Sbjct: 57 LTQAILLLCALLMLGLLWGEWPQDGRMKWVKYFSLLVFIPFYALIDKERLPWALGGLIVS 116 Query: 143 SFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNS 202 + +Y + I + + + IV+ + + + Sbjct: 117 YLCVLAVGVYQWFTIDAQGIPLLGMSYLSFSAMLGIGAIVTSGMACMNPSVRLQILFVIA 176 Query: 203 CAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPI 262 VL + Q LL +I + + + + I++ + ++A + + Sbjct: 177 TLVLLFIQFHQNGRIFLLVTLISILLIAFLRYQIEMRKFLMILISVLVVAVVFAYSSPVF 236 Query: 263 QNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE 322 Q R + +D+ N +SLG RLAM+++GL+ + P S + +A Sbjct: 237 QARLIQIKSDIELLQQGNYSSSLGYRLAMWDVGLHGIAERPLSGFGTGMPEKYFEKTIAT 296 Query: 323 HNRLRG---ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILT 379 + H HN+ IE G G+ G+ FL +S + + L + Sbjct: 297 YKDGLYKDLPEFQETAHYHNDWIEIGMHIGVPGMLVLGFLLWSWYQAFNRNNLNLLGLGL 356 Query: 380 LGIV-GIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 + + GL+D I PI+++ + + + R Sbjct: 357 ISFIFLSGLTDTFIIFSRTPILLLIITAIAINWHKREQ 394 >UniRef50_UPI00016A36CB O-antigen polymerase n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A36CB Length = 409 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 46/304 (15%), Positives = 103/304 (33%), Gaps = 2/304 (0%) Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR 161 +Y ++I + + + + ++ V+ + L ++ R Sbjct: 75 IAKAYDAPSRILLSIAVLFYFRYKRIDFARLIGVVAPVALLILVVQVKLDPHAMAIWGGR 134 Query: 162 ISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH-PFLFLLNSCAVLYVLALTQTRATLLL 220 + +++ + S I + L ++ A LY++ +QTR LL Sbjct: 135 FATYFVDTDMFGVYALILAMFSLFGIEPGQSRPARALSIVGIVAGLYLVVGSQTRTAYLL 194 Query: 221 FPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNA- 279 PI L+ K ++ L +IV+ + R ++L+ + N Sbjct: 195 IPIAAALWLVLKRPSISAKHFVALAALGIATIAIVLSLHDDTSTRVASIYHELDMWLNGS 254 Query: 280 NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHN 339 N TS G RL M+ + +F++SP+ + + A + HN Sbjct: 255 NRDTSGGLRLTMWHMAWELFLQSPWHGYGDTGFRAYLGEPGITAFASQIARQIIFAGPHN 314 Query: 340 EIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPI 399 E++ G+ G + + L+ ++ R +G+ + ++ A Sbjct: 315 ELLANMLRSGIAGAVAVVALFAVPIATFWRARRYSPRARIAADMGLSFTICLMLAGIAFE 374 Query: 400 IIIS 403 + Sbjct: 375 MFTL 378 >UniRef50_A6C2I1 Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2I1_9PLAN Length = 439 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 49/390 (12%), Positives = 113/390 (28%), Gaps = 19/390 (4%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 Y+ F I + S+ I L + + + + +F Sbjct: 33 VYLAIFAGFAIPVSTSLTSVYNLGIFLCWVLSGQYRVTFACFKKYRIVTISVVLFCCLAC 92 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 L++ S Y + + ++ F + + + Sbjct: 93 SLLYTPEVLSLASRNLFKYRQF------LMMPIYLAFFIDPRARRRGIQMFELAMIITLI 146 Query: 145 LIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCA 204 ++ + + ++ L L+ A Sbjct: 147 ASLSCWIFSIDYSVRLMDNAIFKNRITQNILMSFLVYIAAWKFLEHPARRWPYALVAVIA 206 Query: 205 VLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQN 264 VLA+ R+ + I+ Y K K + ++ + ++ N Sbjct: 207 TFNVLAIVPGRSGYVALGILIGLL---MYQKLGAKGILPAAACVGLIGLVTYHNSERFHN 263 Query: 265 RYNEALNDLNSYTNANSV-TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEH 323 R NE + ++ Y N++ +S+ RL YE GL I SP S A L+ + Sbjct: 264 RINEVVKEIKEYRNSSKSRSSVDLRLEFYENGLQIAKSSPLMGSGIGSFAMKYRELMEQK 323 Query: 324 NRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL---GLLILTL 380 + + HNE + G++G+ L ++ + + + + Sbjct: 324 ------GQLVTENPHNEYVMLLVQNGIIGVGLFLCFFWVSWLTTRQLTGIDQALGQAVLA 377 Query: 381 GIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 + + + + ++ + + + L L Sbjct: 378 VYLLVCMVNSLMLDTTEGCLFGYLVGLTLA 407 >UniRef50_A3ERX2 O-antigen polymerase n=2 Tax=Leptospirillum sp. Group II RepID=A3ERX2_9BACT Length = 503 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 61/429 (14%), Positives = 126/429 (29%), Gaps = 17/429 (3%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 + S L S ++ I Y + F+ + I+ + S + Sbjct: 63 LFLSLALKSAGTPMPAMMALIVYIPYAKAIAGNMGGFLPGLNYTTALMVIVIIGMYSRVQ 122 Query: 61 RGRQ---ENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGS 117 L L + G + +I S F++ +F Sbjct: 123 GTHVEPALPLEATFRRLVLLFCVFGAISVIHTDLVFAQWSVFKSIVDYKRWIDPFLVFFL 182 Query: 118 FIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTAT--GAAYS 175 F + + K+ + ++ + I+ R+ G A GA Y+ Sbjct: 183 FSYLVRTQKEAKTLIYLMAVSMVVVGIGSLYQHHVISGRSHRVRLKGIAGQANQMGAFYA 242 Query: 176 TMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNK 235 + I+ V + LF L L L T++R L + + L Sbjct: 243 NYMFLILGFVWMKGLTFLKKSLFALGFWGCLLGLFATESRGDFLALVMGMLLFLFLRKKV 302 Query: 236 SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIG 295 + I+ + + + IQ+ S ++ S RLA+++ Sbjct: 303 LFFVAIAGIIFVSVNIQFLPSGLRNRIQHTVTHRDPYGFSGSSGQLDASARTRLALWQGA 362 Query: 296 LNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFS 355 N+ + P + E + V + L + HN + G+ G+ + Sbjct: 363 ANMIMSHPVMGVGYKMFPEYIYQYVPHNEET-DRLPLRHRDGHNAYLMIGAEMGVPALLL 421 Query: 356 TLFLYFSLFYIAYKKRALG-----------LLILTLGIVGIGLSDVIIWARSIPIIIISA 404 L L +F I ++ L +V L + + + + + Sbjct: 422 FLLLLLYMFRIMWRAYRASPDPYWKTVSVCGLCAVTSLVLTNLFGSRVISLVLAGYLWAL 481 Query: 405 IVLLLVINN 413 + +LL + Sbjct: 482 LAILLKVPK 490 >UniRef50_D1YM01 O-antigen polymerase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YM01_9FIRM Length = 397 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 52/407 (12%), Positives = 124/407 (30%), Gaps = 26/407 (6%) Query: 17 SSMILEIITYIL-CFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 S IL +L S++I ++ + I+ + + R+ ++ I Sbjct: 2 KSWILNNAEMVLTILISIMICMTRSSMAFGNLMYGLIILMTLITCWYRRHEISVPQSIRQ 61 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 + +L + SAF D+ Y + K+ I ++ + + +L + Sbjct: 62 YGWAYLVMLLCVLPSAFISDDILVTTKYFFNIWVWKVLIIVPILLCIKSSRKLYTILSVF 121 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 + + G + ++ DR + + + + ++ K Sbjct: 122 FVYMGIDALSAFGQYLAHYNLDFGDRAGGVINGSVMGLAMLLSFSFPLALIAMFDKSFPK 181 Query: 196 FLFLLNSCAVLYVLAL---TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILA 252 ++ L + L +L Q+R + L I V + Y + + ++ + + Sbjct: 182 YVRLSAIFSSLGILLGMWGNQSRGSWLFNGINGVLITLRYCFVNIRYIL--VLFVTVVGI 239 Query: 253 SIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESR 312 N+ R N + S R+ ++E + + P Sbjct: 240 GYAFTSNQSYMERLESTFN-------ITTDGSNLGRIYVWEADKQMIMDHPVIGVGPGLW 292 Query: 313 AESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA 372 + + H HN I++ S G++G+ L Y + K Sbjct: 293 GKKYKEEYKLEKETQNL-----GHSHNNILQIASESGILGLIGFLGFSIFTIYKSVKNYI 347 Query: 373 L--------GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 + ++ + G D S + + ++L + Sbjct: 348 MSANPYDLSIIVGFISYLFLFGSVDYTWGNSSGIRMFWIVMGIMLQL 394 >UniRef50_C4V160 O-antigen polymerase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V160_9FIRM Length = 401 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 55/401 (13%), Positives = 121/401 (30%), Gaps = 29/401 (7%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 L + L + + + S + IV L L+L+ + + + + Sbjct: 17 LHTCAFYLLCGFGLFSSISIGASNVFLGMLTIVFLCRLLLKHDDWKDVLPSGRIRTAFLA 76 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 + L+ R Y ++ L + ++ + Sbjct: 77 LMGAVLLSAVFSTDVILSLRRFVEYYGYRM-------IGLYAVLLMVREKRRLLWIGICI 129 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAI-LYTKKNHPFLFL 199 ++SF+I A+ I N R + A +M I ++ Y+ + Sbjct: 130 AVSFIINDCAIVFQGIQGNFRAGGFAFSMVAGATLSMFIPVLLIFLHEKYSDRRWRAAVS 189 Query: 200 LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFN 259 L TR + PI+ + + K F ++++L A+ + Sbjct: 190 AVLILSGAALLYNGTRGAWVAVPIVSFVCAVFMIRQKKKLFAGAVLILAVFSAA--FALS 247 Query: 260 KPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 + R + R+ +++ ++F P Sbjct: 248 PTLSARLVSITDINVQTNWE--------RILLWKSACHMFQDHPMFGVGFGCFERQYQET 299 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK-------RA 372 L GA E H H+ ++ + G +G+ + LF + L ++ A Sbjct: 300 Y----ILPGAKEPQLFHAHSNVMNTLAECGAIGLGALLFFWCVLITYGFRTWLATHNIAA 355 Query: 373 LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 L L + LG++ GL++ + + + + L Sbjct: 356 LILSAVLLGLILQGLTNYNMGTSMVMKLHWLLLGLCFSWLR 396 >UniRef50_Q0AIV7 O-antigen polymerase n=2 Tax=Nitrosomonas RepID=Q0AIV7_NITEC Length = 405 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 63/395 (15%), Positives = 135/395 (34%), Gaps = 22/395 (5%) Query: 34 IIAFVDNTFSIKIYNITAIVCLLSLI---LRGRQENYNIKNLILPLSIFLIGLLDLIWYS 90 + + S +Y ++ + L+ L + + L + + L+W Sbjct: 1 MFFCLALWPSGLVYWGIGLLVVAWLVDGGLSRFPDLLKEPLIQGVLVFCGVWGVGLLWSD 60 Query: 91 AFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYA 150 + K FI I F +L ++ + + L ++ G Sbjct: 61 FSVSLTGKWE----------KYFILLIIIPFFSLLNKERLPWVTGALISGYLGVVVLG-- 108 Query: 151 MYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLA 210 Y ++ IS + + + + I++ T + +L Sbjct: 109 GYQYAVLGEQGISLFGMSYLNFSSALGIGVILAVYGGWVTLSRMRWFLSALLWITALLLL 168 Query: 211 LTQTR---ATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYN 267 Q R +LL ++ + + + K +S + I + + + R Sbjct: 169 FLQFRENARGILLSTVMILLLMFCLRYQVKGKVLASYLASIIAVTVLFAASSDVFHKRLE 228 Query: 268 EALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE---SRAESMNLLVAEHN 324 +DL + + TS+G RLA+++IGL+ + +P + ++ + E Sbjct: 229 AIGSDLQLFQQGHYQTSVGYRLAIWDIGLHGLVDAPVIGHGSGMAKHYLQNSFMSYKEGI 288 Query: 325 RLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK-KRALGLLILTLGIV 383 H HNE+IE G GL+GI + +FL + F + + AL + Sbjct: 289 YQDLPEFHEAKHFHNELIEIGVHLGLLGILAFIFLLWCWFKTFKQHQMALLGGAIVCFTF 348 Query: 384 GIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTI 418 GL+D + IP +++ + + ++ Sbjct: 349 LSGLTDTFLLYSRIPPFLLAVTAIAVCWQRYEGSL 383 >UniRef50_A5EUW2 O-antigen ligase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EUW2_DICNV Length = 401 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 63/403 (15%), Positives = 134/403 (33%), Gaps = 24/403 (5%) Query: 19 MILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSI 78 M L I + + F+ I ++++ + + + + Sbjct: 1 MKLNTIQGGIIVAIFLCTFLIPGGYNYGMLALLITGIIAIAEKSPHRLSYFERRWIAFLL 60 Query: 79 FLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYT 138 + + + +Y N ++ + + L+ + L Sbjct: 61 IFSAISLTLRLLHGEP--------LSTYDNLSRYGLSIILLYGLSRYPPAEKYYSWALLA 112 Query: 139 LYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLF 198 + L+ A Y + G + +M+ + SG + Y K Sbjct: 113 GTLTALLMVLVARYRGD------SAIGYQHHIQFSGISMIFAVFSGFRLPYAKTRWQRFI 166 Query: 199 LLNSCA-VLYVLALTQTRATLLLFPIICVAALIAYYNK-SPKKFTSSIVLLIAILASIVI 256 L+ + + AL R + L+ P I V I + + K LL++ +++ Sbjct: 167 LIVALFCGVCAAALGGGRGSWLIVPPILVLFFIMMRKRVTLKNAALGFFLLLSFFSALYC 226 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 I + R +DL+ Y TS G RL M+ ++ + P + Sbjct: 227 IPQTGVAARVRGVFSDLDHYRQGTVATSQGMRLEMWRCARLMWQEKPLMGWGSVGMQAEK 286 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK------K 370 L+A ++ F+ HLHN+ I+ G G++G F+ LF+Y ++ + Sbjct: 287 ARLIARNDCHFSIAPFN--HLHNDYIDIGVRYGIVGCFNFLFIYCGALFLYFVMLAQFPS 344 Query: 371 RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 A + + + + L++ + I + LL + N Sbjct: 345 IAWQGIAINCCFMVVSLTNAFLSHHISIIFYLLLNSLLFIQTN 387 >UniRef50_B7J3X6 O-antigen polymerase family protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J3X6_ACIF2 Length = 417 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 53/404 (13%), Positives = 126/404 (31%), Gaps = 9/404 (2%) Query: 14 TLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLI 73 ++++ ++ + F + F + I LL ++ + I Sbjct: 5 RADATLMKALLQKTMFLFFCLPIFFFPLSTAAAGISGGIFVLLYIMSGYWKNLGQIPTRP 64 Query: 74 LPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE 133 + + L+ L L+ + + G+ + + ++ Sbjct: 65 WFIPLTLLILWTLLGTIWSRANPHDTWIAISRLGYF-FFAYAGTTLPWNRSRFRMIPGLF 123 Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193 L + L ++ S G + + + + + Sbjct: 124 LAGLILNWIVGLCQWLGIWKWSPLIPRLGPVGYANHIFLSMTLTMALLWIAYDMRDRVLL 183 Query: 194 HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 + + + A L L + R LLF I+ A+ + + + + L I Sbjct: 184 PRWANAILAVAFLLQLGMGAGRTGQLLFVILMPLAVWVLFRGQWRYWALGGIALTIIGMG 243 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 + +Q+R E L +L + + TS G R+ M + L + + P + A Sbjct: 244 ----MSPIVQHRVQEGLQNLQVVSKGDYDTSWGLRVLMAQGALYMGFQHPILGVGTGNYA 299 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL 373 M L H N + ++ G+ G+ ++ +++ A++ +A+ Sbjct: 300 NEMAQLQKNHILPELPSPLIMSQPQNSYLLELAMLGIPGLLLLVWFLWAVTAPAWRLKAV 359 Query: 374 ----GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 +LI + SD +IW + + L + + Sbjct: 360 PEGWFVLIYMAVFIAGSFSDTLIWGYANVFSLAILTALPIPLAQ 403 >UniRef50_B8GCP3 O-antigen polymerase n=3 Tax=Chloroflexus RepID=B8GCP3_CHLAD Length = 496 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 44/377 (11%), Positives = 122/377 (32%), Gaps = 39/377 (10%) Query: 44 IKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATY 103 + I + L + + R ++ + L + ++ + + + S Sbjct: 78 TQFCFILVALSFLWQLSQRRWPWPDMPGIALAIFLWTLAVTAAL------TPLSRSEGLK 131 Query: 104 HSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEND--- 160 + + I+ + + L +++ ++ ++ L + + A + + Sbjct: 132 ETLRWGTVLLIYLAAMSALQDPDRVQWRRAVLVACLLAAPAITALIGIGQHLTGIGPASF 191 Query: 161 -------RISFGVGTATGAAYSTMLIGIVSGVAIL----------YTKKNHPFLFLLNSC 203 R +G A ++ L + + + + + Sbjct: 192 AVGDGRVRAYGTIGQPNSFAGYLNQAWPLAAGFGLVMIVTHHWHTWRDRLRLGIVFITAG 251 Query: 204 AVLYVLALTQTRATLLLFPI---ICVAALIAYYNKSPKKFTSSIVLLIAILASIVI---I 257 +++ L + +R + + + L A+Y + + + ++L+ I++ + Sbjct: 252 SLIGGLLASFSRGGWVGAALGATVMTVVLGAWYGRRMLRQSIPVILVAVFGGMILVNSGL 311 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTS-----LGARLAMYEIGLNIFIKSPFSFRSAESR 312 + +R + +L + N + + R+A + N+ + P + Sbjct: 312 LPTALSSRLTSIIANLQPFDVRNVNITPDNFAVVERMAHLQAAWNMVQERPLLGVGPGNF 371 Query: 313 AESMNLLVAEHNRLRGALEF--SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 + LV + S H HN + + GL+G+ + L L S++ A + Sbjct: 372 TIAYERLVYSGQTPTWIKPWYDSRGHAHNYYLHIAAESGLIGLSAYLLLLGSVWRTAVRA 431 Query: 371 RALGLLILTLGIVGIGL 387 T GI G+ Sbjct: 432 VQQANDWFTRGIALGGI 448 >UniRef50_A9CZZ0 RfaL protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CZZ0_9RHIZ Length = 404 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 64/415 (15%), Positives = 147/415 (35%), Gaps = 40/415 (9%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRG------RQENYNIKNLILPLSIFL 80 IL FS+ + + AI+ L L+ R + + + K ++ ++ Sbjct: 3 ILMMFSLAASLSMPDAYTIAGALFAIIGLFYLLKRMHARASLFEPHLSGKLCLIFMAYAF 62 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 I L +W+ A + F++ IV L ++ + + Sbjct: 63 ICALIQLWHRAPISHYEMYM-----------PFLWAPLIVLAVLDGRIDRRFIWL--GCL 109 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA-----ILYTKKNHP 195 + L A++ + +R +G+ + +L+G ++ + K Sbjct: 110 LGAVLACFLALFQSIYLGAERPFGFLGSPITFGNNALLLGCIALAGRHDSPLNLRKPIWL 169 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA-YYNKSPKKFTSSIVLLIAILASI 254 L + + TQ++ L P++ + ++ ++ S + S V + Sbjct: 170 ALAYMGFFFGVVASLTTQSKGGWPLIPLVLIWVIVEDFWRASRQGRRSFFVAAFTFACLL 229 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNANS--VTSLGARLAMYEIGLNIFIKSPFSFRSAESR 312 + +R A ++ S ARL ++ GL+I+ + P+ S E Sbjct: 230 PFMPLDTPLSRVKSAAIGTMAWFQTGEVVEGSADARLELWRFGLSIWPEKPWLGHSREGV 289 Query: 313 AESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA 372 + M+ +A++ + LHNE I+ + +GL+G+ S + ++ + + + Sbjct: 290 VQRMHEKIAQNEVDPWIKSLTG--LHNEPIQLLAEQGLVGLLSWVMMFAASILVFGRAYT 347 Query: 373 ----------LGLLILTLGIVGIGLSDV-IIWARSIPIIIISAIVLLLVINNRNN 416 LI + GLSD+ ++ + I + + L ++ Sbjct: 348 EHSRVQKVLGQAGLITVAASLTFGLSDMNLMLNVNRQIFVFLVMALAALVVAERR 402 >UniRef50_P73958 Slr1515 protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=P73958_SYNY3 Length = 474 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 81/275 (29%), Gaps = 35/275 (12%) Query: 158 ENDRISFGVGTATG-AAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRA 216 + R+ +G AAY + G+ +++ + L L L TQ+R Sbjct: 189 QATRVYSFLGNPNLLAAYLVPMTGLSLSALVVWRRWWPKLLGATMVIVNLLCLFFTQSRG 248 Query: 217 TLLLFPIICVAALIAYYNK--------SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNE 268 L + L Y + + + IL +I +PI+ R Sbjct: 249 GWLAVLALGATFLALCYFWWLPQLPKFWQRWSLPLAIAVAVILGGGALIAVEPIRLRAMS 308 Query: 269 ALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG 328 +S R+ ++E + P + + Sbjct: 309 IF-------AGREDSSNNFRINVWEGVKAMIRARPIIGIGPGN------EAFNQIYPYYM 355 Query: 329 ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA-------------LGL 375 F+ + ++ +E G++G L+L + +G Sbjct: 356 RPRFTALSAYSIYLEILVETGVVGFTCMLWLLAVTLGKGVELVKRCRQTLAPEGIWIMGA 415 Query: 376 LILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 L +G++ G+ D + + + + + ++ Sbjct: 416 LAAIIGLLVHGMVDTVWYRPPVSTLWWLLVAIVAS 450 >UniRef50_Q0FYD9 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYD9_9RHIZ Length = 431 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 54/395 (13%), Positives = 126/395 (31%), Gaps = 27/395 (6%) Query: 29 CFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIW 88 S + + + + + + A + L++ + + + L Sbjct: 26 IILSYAVMPLAGSLASFMIVVLACWAAICLVVGRL-----AWRPFGAAAPIVWSHVVLFS 80 Query: 89 YSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAG 148 A + T + F+ V S E+V L Sbjct: 81 VLALADIVNIAPGTAALDIGLRLFFLMPVVAVHRVAISSTGDVLEAVFRGAAIGGILAPV 140 Query: 149 YAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAI-LYTKKNHPFLFLLNSCAVLY 207 + + + R G A + +L ++ + + LL + Sbjct: 141 LGLASILLSGSYRAEGLAGNAGPFSILCLLTAGLALLGLRAKKDMLWNAAALLGAFGAAL 200 Query: 208 VLALTQTRATLLLFPIICVAALIAYYNKS--------PKKFTSSIVLLIAILASIVIIFN 259 + +T R PI+ + + + +I + + ++ Sbjct: 201 AVVMTGMRGAWPALPIVLAIVVWVRWRDLPDVWARVEKRHRVWAIGAALLLTLVGAVLGA 260 Query: 260 KPIQNRYNEALNDLNS-YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNL 318 + I R + + D+ + + ++++ +S+G R MY G+ ++ P ++ Sbjct: 261 EYIGYRTQKLIEDVQALFLSSDANSSVGLRAEMYRAGIAALLERPLLGWGESGVWPAL-- 318 Query: 319 LVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL----- 373 A FS HLHN I+ G G++GI + + + + + AY++R Sbjct: 319 --EPRLGAAFADGFSYSHLHNMILTVGVQAGVLGILALIAVLITPVWCAYRQRNRAEGRA 376 Query: 374 ---GLLILTLGIVGIGLSDVIIWARSIPIIIISAI 405 LIL GL++++ + + + +I Sbjct: 377 RLAFALILVCAYAIPGLTNIMFFHDILDGVWALSI 411 >UniRef50_A5IIX8 O-antigen polymerase n=6 Tax=Thermotogaceae RepID=A5IIX8_THEP1 Length = 1065 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 46/434 (10%), Positives = 121/434 (27%), Gaps = 45/434 (10%) Query: 19 MILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSI 78 + + L + I +++ + L+ R+E I+ + ++ Sbjct: 5 FYIMYVVVALFSSRKLTYEFSVPKYALITVFLSVMFFMILMKILRKEKLEIRFNMAHVAF 64 Query: 79 FLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYT 138 F + L+ DN + + + A + F + ++ T Sbjct: 65 FAFAISALLSTINVYRDNPVY---FRYSFDIAIYVLLMFFTSIFISNFFVTKERIRRFLT 121 Query: 139 LYSLSFLIAGYAMYINSIHENDRISFGVGTA-------------TGAAYSTMLIGIVSGV 185 + + +N D VG+ + L ++ Sbjct: 122 VSVALAGFIAFDALLNFYGGVDVFLGSVGSPFSRATVKATIGNVNFVSNFLSLNLPLAIY 181 Query: 186 AILYTKKNHP------FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKK 239 I + +++ ++ + ++QTR+ + I + Y KK Sbjct: 182 LIASADFKRKEASVIKVIASVSALLIVSGILVSQTRSLYVANIISLCIFSVFYMIFRKKK 241 Query: 240 F------------TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGA 287 + ++ +V+++N P ++ V+S Sbjct: 242 VSKETDREVLSMSKALTTFVLIASIVLVVLYNLPTPLNGYGMVSPAGRIQAVAEVSSWHE 301 Query: 288 RLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHL---HNEIIEA 344 RL + + + + + + L + + HN+ ++ Sbjct: 302 RLLSWFSSIYQWRTHKILGTGIGTYQILTINYMGDVIEDHPILMYGWNNFKRTHNDYLQV 361 Query: 345 GSLKGLMGIFSTLFLYFSLFYIAY--------KKRALGLLILTLGIVGIGLSDVIIWARS 396 G++G S +FL SL + + + L L L + + + Sbjct: 362 LGEMGIVGFVSVVFLALSLGILFFKIIRRITVRDDLLLFLTLASSFITFMMHSAFSFPAH 421 Query: 397 IPIIIISAIVLLLV 410 + + + + Sbjct: 422 LLPNGFLVMTIASI 435 >UniRef50_C9PJM0 O-antigen ligase n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PJM0_VIBFU Length = 407 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 137/396 (34%), Gaps = 16/396 (4%) Query: 17 SSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPL 76 + + +L F + + K IT ++ LL ++ + E + Sbjct: 7 NKKTFNEVLLLLPFVFAFAFMIWFEGASKALVITTVISLLVFVIVFKGEIKSNIANASRK 66 Query: 77 SIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVL 136 L+ + ++ A + + + + + I ++ F + + Sbjct: 67 PFHLLLWVFSVFVIAQSLLHGVSSREIRAAICLSLIALYFPF---------QRIQPIYYQ 117 Query: 137 YTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF 196 + I ++Y + IH +R + A+ + +L + + Sbjct: 118 SLVVLGCCTIFSNSLYFSVIHGFNREFGVINPIPYASIAALLALLALHFSFGAQTTKGKV 177 Query: 197 LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 +F S + L LT++R L F + + + KK VL+ +++ + Sbjct: 178 IFAGASLFPIISLILTESRGVWLAFICAFLMLSWGLFKFTIKKIIFVSVLVASLITLLSG 237 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 F I+ R + + N TS+G R M+E L + + + + Sbjct: 238 SF---IEQRIEKTQYEFEQIQQGNMNTSIGLRFQMWEASLKLADNNWLVGLGTDHF-DKF 293 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLK---GLMGIFSTLFLYFSLFYIAYKKRAL 373 L +H + + H HN+ I++ GL + L L L A K+ Sbjct: 294 EQLYTQHQITKALYDLHPPHYHNQFIDSVVKSGLIGLFFLLLLLLLPLYLVRHADKRTKN 353 Query: 374 GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 +L + V +GL+D + I+ + +++L+ Sbjct: 354 IVLSVVALYVVMGLTDAPFYNGQTFILYVLTMLILI 389 >UniRef50_A7JUL1 Possible O-antigen ligase n=12 Tax=Pasteurellaceae RepID=A7JUL1_PASHA Length = 418 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 68/407 (16%), Positives = 134/407 (32%), Gaps = 14/407 (3%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 I TF + + +++ + + +L Sbjct: 13 IALFYNVLVATFFVTVLTFKKGYSYVPMALGIIATLSFLFYRFKLKQKWLLDKEDKFFIF 72 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 + ++ F + N +I + I+ L K + ++ Sbjct: 73 SLIGYFLTFAMSAIFNGDGIREIDNPIQILLLIPLIILFRLYPIKKETVLHFIPIGALVA 132 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC 203 IA Y +I ++ + + A ++ ++ + + +L+ + Sbjct: 133 GCIAIYQRFILNLKFPFPEIMRIQSGNIAILLSLFSIAIAFYWLSKKRIKTGIAYLVFAM 192 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP-I 262 L+ LT R L F IC L + KK I+L + S I + I Sbjct: 193 FGLFASILTGARGGWLAFIPICFFILFLNLRQLNKKAIFLILLALISSLSFFISKPEFGI 252 Query: 263 QNRYNEALNDLNSY-TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 Q RYN A ND+ + N +SLGAR M+E L + P + + Sbjct: 253 QKRYNAAKNDIIVFLEKGNRHSSLGARFDMWENALIGIREKPLLGHGSTGYETFKKKQIE 312 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA--------- 372 + L F++ LHN+ +EA +G++G + + + F I K+ Sbjct: 313 TKQMAKTTLRFNS--LHNQYLEAFVKRGVVGFMALMAILIIPFVIFAKRLKAKNREVKCM 370 Query: 373 -LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTI 418 + ++ + LS + S + ++LL + +N I Sbjct: 371 AILGIVHIISHSFFFLSQSFLAHNSGSLFYFFVLILLYHLVKQNEEI 417 >UniRef50_B2IAL7 O-antigen polymerase n=7 Tax=Xylella fastidiosa RepID=B2IAL7_XYLF2 Length = 409 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 109/316 (34%), Gaps = 17/316 (5%) Query: 116 GSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYS 175 + + L ++ L+ +L I + R G A A Sbjct: 96 FLLLPWSALWVYALRPRKQWLWCGAALGVFGVLLLAVIQILRGETRAE-GWVNAIVLADV 154 Query: 176 TMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNK 235 TM + IV A K L L A V+ L+ +R LL ++ + ++ Sbjct: 155 TMALTIVVVFA---RPKQSWLLPSLVLLACSAVIVLSGSRGVLLAMAVVLLVLTMSVRWA 211 Query: 236 SPKKFTSSIVLLIAILASIVI-IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEI 294 S + + L+ ++ + + Q R E D+ + +S +S GARL ++ Sbjct: 212 SLRVRLLLLAGLVLGGGALALEVPQVTEQMRLVEFQADIRRLESGDSDSSTGARLERLQV 271 Query: 295 GLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIF 354 F+ P +M LL + H HN++ E + +G+ G+ Sbjct: 272 AYATFLSKPLMGVGIGQFDRAMTLLPVCR-GDEWLVRCHLRHAHNDLAEWAATQGVPGLL 330 Query: 355 STLFLYFSLFYIAYKKRALG-----------LLILTLGIVGIGLSDVIIWARSIPIIIIS 403 + L +Y F + + A G ++L + + G++ + + Sbjct: 331 AILAIYGVPFVLLLRLYAAGGRKSFRGPAATGVMLVVSYMLCGMTQSMFSHQMSTSFYAV 390 Query: 404 AIVLLLVINNRNNTIN 419 A+ + + + R + Sbjct: 391 AVGVCIGLALREVKLR 406 >UniRef50_A6SUC2 Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SUC2_JANMA Length = 431 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 59/408 (14%), Positives = 128/408 (31%), Gaps = 18/408 (4%) Query: 9 SLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL-RGRQENY 67 S+ + L + L + +A +++ + + + RG Sbjct: 2 SILTPDSGNRNTLHNTGFYLLAGLIALAPLNSKVLGLAWLSFWVFGIYVAFKMRGTDAQT 61 Query: 68 NIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQ 127 N I F +L LI + + ++ L F+ S Sbjct: 62 NSIAAITTSVWFKSCVLALILGGISNLIWHEGIDSLNAQLRLLLAAAAAFFLARRGAISG 121 Query: 128 LKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAI 187 K + + + +E+ R S A + ++ A+ Sbjct: 122 HIRIKLIHAIAIACVFAFARTIFLIAQGANEDIRASLASNAIPWAVVISFYTCLLLPAAL 181 Query: 188 LYTKKN-HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKS-----PKKFT 241 L+L + + + +Q+R L+ P C+ +Y + ++ Sbjct: 182 SEQNSLLRRRLWLFSVGCGIGAILQSQSRGAFLVIPWCCLVYAWFWYKQYAQEGGFRRAL 241 Query: 242 SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYT-NANSVTSLGARLAMYEIGLNIFI 300 +V + I+ + I R + A+ D+ + N TS+GARL ++ + L+ Sbjct: 242 LMLVGAVTIVLATSWFMPGDIL-RMHRAVQDIEEAQTSENYNTSMGARLYLWCMALDGIR 300 Query: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALE---FSNVHLHNEIIEAGSLKGLMGIFSTL 357 +SP+ + R + + + A + H+HNE + GL+ + S + Sbjct: 301 ESPWIGIGSVERMRRIKHAGEGESIEQVAKLQEVRALGHVHNEYLHNALDGGLILLASFM 360 Query: 358 FLYFSLFYIAYKKRALG------LLILTLGIVGIGLSDVIIWARSIPI 399 L + + R + L + L++V Sbjct: 361 ALLIGMATAIFYLRRVAPVAAWQLGGVLFMHATASLTNVNFAHNYYAT 408 >UniRef50_A9AZ26 O-antigen polymerase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZ26_HERA2 Length = 474 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 55/411 (13%), Positives = 134/411 (32%), Gaps = 52/411 (12%) Query: 35 IAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKV 94 + + + L +++ L++P S+FL+ LL + + Sbjct: 70 LLSFPLGLTATHVIGIMALGAWLLYGMAQRKIIIDTTLLVPWSLFLMALLLSAGLTEY-- 127 Query: 95 DNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYIN 154 + + F+ V T + ++ ++++ + A + Sbjct: 128 ------NAVDALKQVVRWFMALLAFVVTVATITTPKRAIGLIAVMFTVGVIEALIGIQQY 181 Query: 155 SIHEND-------RISFGVGTATGAAYST-----MLIGIVSGVAILYTKKNHPFLFLL-- 200 + R +G A M + + G+ + ++ + +L+ Sbjct: 182 RVGAGPFAIGETVRAYGTIGKPNTFAGFLELMWPMTLSVALGLLWFWWQQRQRWHYLIGS 241 Query: 201 -----NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 S +L + ++ +R + V L+A + + +L+ + S Sbjct: 242 ALSAGASLIILAAVGVSFSRGAWIGIMGAVVVMLLAVDRRRALPLIALGGILLLAIISQP 301 Query: 256 IIFNKPIQNRYNEALNDLNSYTNA-----NSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 +F I R + N+L + + ++ R+A ++ G N+F+ P + Sbjct: 302 ELFPPVITERISSLTNNLRIFDAGRVTVTDENFAVVERMAHWQAGANMFLAHPLLGVGPD 361 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA--- 367 + + G S H HN I + G++G + L L +++ A Sbjct: 362 NFNRAYPEFF------VGRWSESQGHSHNYYIHIAAEAGILGFVAYLVLIAAVYRQAYLA 415 Query: 368 --------YKKRALGLLILTLGIVGIGLSD---VIIWARSIPIIIISAIVL 407 ++ A+G + I + D V+ + + + +VL Sbjct: 416 IQATRGTVWQMVAIGCCGIITAIQLHNVFDNLHVLNFGIHLSAVWALCVVL 466 >UniRef50_C4TSW9 O-antigen biosynthesis protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TSW9_YERKR Length = 415 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 49/396 (12%), Positives = 112/396 (28%), Gaps = 25/396 (6%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 IL F+ ++ + S + NI ++ L+SLI+ R+ L PL + L Sbjct: 20 ILSGFAALLLGIALPTSNPLINIALVLILISLIIN-RKSLQLKPLLTNPLVYLPAAMFAL 78 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 + S NS I F + +L + + L Sbjct: 79 LALSLLFHHNSYGPEMVSKDKKFLYILPLALFFINQPQRVKLFCIGFLAANAVVLVGTLA 138 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVL 206 G + + T + + + +A LL A Sbjct: 139 VGVLHIPIGHIDPANPTLFKLQITQNFFLALSTILWLMLAFKSQGWKRWGYGLLVVAACY 198 Query: 207 YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRY 266 VL L R + + L + + + + + ++ R Sbjct: 199 SVLFLVLGRTGYVALVVGLGVWLFFSLGRRQRWLLVVLGAIAFVAVLLI---PNKATQRI 255 Query: 267 NEALNDLNSYTN-------ANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 + ++++ TS+G R + + ++P A + Sbjct: 256 TQGIDEIKVCMAAPAGNVTGACRTSMGQRSEFAIEAVRLIKEAPILGHGAGGFYYEDPKI 315 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK---RALGLL 376 + + HN+ + G++G+ L + + +++ LL Sbjct: 316 -----------NYKINNPHNQYLLETIQSGVVGLIIFLAWIVCCYRVIWQQIPALRNVLL 364 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 + + + + S + + + +L + Sbjct: 365 AVLTSYMACNFFNSFLLDSSEGHLFMIFVAILAGYS 400 >UniRef50_A3UQU5 RfaL protein n=1 Tax=Vibrio splendidus 12B01 RepID=A3UQU5_VIBSP Length = 411 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 61/409 (14%), Positives = 133/409 (32%), Gaps = 35/409 (8%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 + ++ I F +++ FS + A+ L Sbjct: 6 NNRYLVSSIVSGFFFSFLLLTGDSYKFSTLPLVLVALFTLPWTFKNSNGIYIK------- 58 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 ++ Y + + L+ IF ++ S + + Sbjct: 59 -----YTTGAMLGYFLVTLLSLTINGGDLGQLDMPSRVIFAVVVMLYIANSP--PSIKFI 111 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 Y++ + + A+Y A + ++S VA++Y K+ Sbjct: 112 FYSICLGASIAGTLAIYHYVTTGERAFYENGYMVIQAGGIASSLALLSIVALIYAKQTKE 171 Query: 196 FLFL----LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAIL 251 L + ++ L L +R +L P I + Y + + +L I Sbjct: 172 LLLITISSVSIILGLSATLLAGSRGAWILPPFIIIYLFYIYKDSFSFRSKVIAILSITAT 231 Query: 252 ASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES 311 + + I+ R + L+D++ Y N+ S TS GARL M++ + P + + Sbjct: 232 IIFI---SPTIKPRIDAMLSDIHRYQNSYSKTSSGARLEMWKSATYSALDKPIFGQGFDG 288 Query: 312 RAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK- 370 + + + + L+ + HN+ E KGL+G+F+ + Y+ +KK Sbjct: 289 VKRAKKAQIEKGLVDKQVLK--SKRAHNQFFEELQTKGLIGLFTMFAFFGVPLYLLWKKI 346 Query: 371 -----------RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 A+ ++ ++G L+ + S + + Sbjct: 347 STSRSRNNQYFFAVAGIVHITSVIGFSLTQHYLAHHSGILFYSIGTAIF 395 >UniRef50_B5YIP3 O-Antigen Polymerase family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIP3_THEYD Length = 623 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 59/420 (14%), Positives = 128/420 (30%), Gaps = 32/420 (7%) Query: 18 SMILEIITYILCFFSMIIAFVDNTFSIK-----IYNITAIVCLLSLILRGRQENYNIKNL 72 ++L I++ I F I K I+ + V ++ + ++ L Sbjct: 16 KILLIILSAIFLFIMHIFLPNIGGVIAKQVEYVIWFASGTVVFIACLKVLKERTLKESPL 75 Query: 73 ILPLSIFLIGLLD------------LIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 + + F+ + + SA+ V +H Y T K +F ++ Sbjct: 76 KIYILFFITAWIGSIVFNQIRNLDYFLISSAWLVGGFVLWFAFHQYELTQKQKLFIFLLI 135 Query: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIG 180 FL+ + + + A + + + + A + + Sbjct: 136 FLSAVIESLIGIIQFFGLYRYIPVTPSPEAGMVGGVFQQKNLFASW----VATGLIVSLY 191 Query: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 +VS + LF + L + Q+R LL + + + Sbjct: 192 LVSTAWLRSFSSFKKILFFAGIFLLSLSLIIAQSRTGLLGVVLAIILIFLVRRKTYKPIK 251 Query: 241 TSSIV---LLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLN 297 + V L IA +++ + + Q + + + S R+ MYE + Sbjct: 252 KTVFVWLMLFIAGVSAGFFLLSVKDQLGIEKLAVKKIKWFSDPEQVSYRERILMYETSFD 311 Query: 298 IFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNV-----HLHNEIIEAGSLKGLMG 352 +F ++PF+ + + A+ + H HNE+ + G+ G Sbjct: 312 MFKENPFTGQGFSNFGSLYMYYQAKVKKSNPDYYKGTGNQYTHHPHNELSLIVAESGIFG 371 Query: 353 IFSTLFLYFSLFYIAYK---KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 I L L + + K +RA L + + + + I + Sbjct: 372 ILGVLCLLYGILKFFKKIGYQRAGLYTALLTPFLIHMMLEYPLHLSVAHWFTFVLIGAMA 431 >UniRef50_Q3B1X3 Putative uncharacterized protein n=1 Tax=Chlorobium luteolum DSM 273 RepID=Q3B1X3_PELLD Length = 410 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 58/396 (14%), Positives = 130/396 (32%), Gaps = 26/396 (6%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 +Y+ + F +I + ++ + + + ++ F++ L+ Sbjct: 19 SYLFILLGFALPFSVAAGNILVALFLVLLLIGGVRREDWTRVRHSPVVLAVSGFFVLHLI 78 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 L+W V AK +F+ ++ + + Sbjct: 79 GLLWTEDMPV----------GLHVVAKAAYLLLIPIFMLGVKPEHMRRYLWAFLAAMVVQ 128 Query: 145 LIAGYAMYINSIH-----ENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFL 199 I Y +++ + + +G T + + + + + + +L Sbjct: 129 AIWSYGIWLQLLPTGTFGGPEDPVMFMGRITYSPFLAIAVYLSLALGVLERGAGWGKKLF 188 Query: 200 LNSCAVLYV--LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 S V L LTQ RA + F ++ V A+ Y++ ++++A L + Sbjct: 189 TLSLGVFLAVDLFLTQGRAGHVAFFVVAVIAVFQYFSGRRWVAGLVSLVMVAGLFTAAYT 248 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 F+ + R +A++D N Y NS TS+G R+ + IF + P Sbjct: 249 FSDAFKGRLGQAVSDSNGYEMTNS-TSVGTRITFVLNSMEIFKEHPLIGVGTGDFRVEYA 307 Query: 318 LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG--- 374 + + A + H+ G++G+ + L++ + A K Sbjct: 308 RMNERMSPAMPATH----NPHDMYALEMVQFGVLGLAALLWILYLQVSFARKSNNPLQRN 363 Query: 375 -LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 + L L I SD ++ ++ + L Sbjct: 364 VGVALPLIYGVIMFSDSYLFGHFSTLLFVYLSAFLY 399 >UniRef50_Q9ZM38 Putative n=15 Tax=Helicobacter RepID=Q9ZM38_HELPJ Length = 429 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 52/413 (12%), Positives = 144/413 (34%), Gaps = 20/413 (4%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLL-----SLILRGRQENYNIKNLILPLSIF 79 + L F + + + + + + + + N+ L++ Sbjct: 10 VFTLIFALFFLTSFKKPLTQVLLIVLMVFLFFRCYFQASLKETFRINHLKTMPFKWLTLA 69 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 +G+ I+ + F + +S LN + + G+ + + ++K ++ + Y++ Sbjct: 70 FLGVFLSIFPNMFNMYDSQTFRYNLFALNMSLTYACGALCLLFSSRLRIKLNQKVLFYSM 129 Query: 140 YSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFL 199 +F+ ++ R ++ I A+ + F Sbjct: 130 AVANFINGLLSLVQKIYFNMPRAQGFSTVKEYVVLVSVSILGCYIYALYSQNQKEKLFFT 189 Query: 200 LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFN 259 L+ V+ L+ TR+ + F + +++++++ S + + + Sbjct: 190 LSVFVGFLVVILSATRSATIAFVATFLILSCFILYAKKSLKPLGYMVVVSLVLSALYVGS 249 Query: 260 KPIQNR---------YNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 ++ R DL Y ++ +S+G RL ++ L + PF +A Sbjct: 250 NALKKRGAIKQSRVQNQTFEEDLKRYAKKDADSSIGWRLERWKEALTVLRLRPFFGMAAS 309 Query: 311 SRAESMNLLVAEHNRLRG-ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFS---LFYI 366 + + + +++ R L N+II + +G++G LF +F+ Sbjct: 310 EKCQRLEEILSLSKSYRAKDLILCYERYDNQIIHVLATRGIIGFLIWLFFLLVIVKIFWS 369 Query: 367 AYKKRALGLLILTLGIVGIGLSDVII--WARSIPIIIISAIVLLLVINNRNNT 417 K+ +L + + + + + + I +V+++V ++ + Sbjct: 370 GIKQNSLISFFILITLAFYLIFGIGFDPFDFFITGSFFVGMVMMVVFLKKDKS 422 >UniRef50_C8Q870 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q870_9ENTR Length = 422 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 73/407 (17%), Positives = 161/407 (39%), Gaps = 16/407 (3%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL----RGRQENYNIKN 71 +I + L SM + FS KI+ I + + ++ + + + + + Sbjct: 13 NIIIIAVNLVVFLLSLSMPLTLFSYGFSQKIFYIASYLSVVLFFVTLANKHARTSIDKYT 72 Query: 72 LILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTL------T 125 +L ++IF +GL+ L W + + + F + ++ + + + Sbjct: 73 WLLFIAIFALGLVRLGWALDIRANYTDFTGPTANIISNYLLGGKRLLLGAFIISVISIHH 132 Query: 126 SQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGV 185 ++ L L + DRI A+ ++Y + + Sbjct: 133 QKITPAMVGCSKIFLWLGALATLGFGVHEYLLTGDRIKLTADAASSSSYMVLFLYCAYLW 192 Query: 186 AILYTKKN-HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSI 244 + L + ++ LT TR +LL F I + + +Y + Sbjct: 193 LSAKDVSRLWITIDLAFVAIIFSLVILTGTRVSLLAFLFITLCQISRFYGLLTVLKSRRN 252 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF 304 ++ IL + +++ R+ +A N++ +Y+N +S TS+GAR+A+++ GL+ + Sbjct: 253 RVITLILVAGLVMSTG---ERWMQAFNNIENYSN-DSSTSVGARVAIWDSGLHFLPEHLG 308 Query: 305 SFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 + + A H ++HNE +E +L+G++G+ +FLY + F Sbjct: 309 FSSPDVRTVTARAYIAAFHPGNTEGYTNVKYNMHNEFLEVVTLEGIVGLVCLVFLYVATF 368 Query: 365 YIAYKKRALGLLIL-TLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 +I K+ AL + L + +GL+D ++ + + A+ L + Sbjct: 369 WIWSKRSALQGISLPVAALFIMGLTDSVLIYPQTTTLFVIALALCAI 415 >UniRef50_B8F9U4 O-antigen polymerase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9U4_DESAA Length = 459 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 46/426 (10%), Positives = 120/426 (28%), Gaps = 52/426 (12%) Query: 12 PYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVC----LLSLILRGRQENY 67 P + + Y L F + +S+ I A++ L I+ GR+ Sbjct: 40 PISKGLKAVSRFCLYALVIFPPLAMGGAIGWSVPIIEWLALLAISCVFLRRIILGRKLWV 99 Query: 68 NIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQ 127 + +++ + L ++ + S + + + + Sbjct: 100 STPMDRPFIALAAVCALSTVFSINVRNSLSAL----------GLLAAYIAVFYVAIDVVR 149 Query: 128 LKSKKESVLYTLYSLSFLIAGYAMY------------INSIHENDRISFGVGTATGAAYS 175 + + Y + L +A + ++ + R+ + A Sbjct: 150 TRDGLRKLCYVIVGLGVFVAVFGIFKYFGANPFTWWEYHDQLPGRRLGSTYYNSDHLAGL 209 Query: 176 TMLIGIVSGVAILYTKKNHPFLFLLNSCAVLY-VLALTQTRATLLLFPIICVAA--LIAY 232 + + ++ + + C + L ++ +R + + A Sbjct: 210 MEMTLCLGVGLLMAGLSRSKRIAIGLGCLFMATALVISLSRGGWAGALVGLGLIGVIFAE 269 Query: 233 YNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMY 292 + +++ ++ +VI+ + P R A S +R+ ++ Sbjct: 270 RRYFRRGIIVALIGATFVVMLLVILMSSPTVERILTA-------EQGIDNASWSSRVTVW 322 Query: 293 EIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMG 352 + ++ P + + E L H HN+ + S GL+ Sbjct: 323 KATRDMIADHPVFGVGPGNFSLGFTQYQPEG------LSVRFFHAHNDYLHIISEIGLLL 376 Query: 353 IFSTLFLYFSLFY----------IAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIII 402 I L++ L + +G L I+ + D + + + I Sbjct: 377 IPVVLWMTIVLIRQARIKINPPSRLIRGTTIGALAGITAIIIHSIGDFNLHLPANALSFI 436 Query: 403 SAIVLL 408 + Sbjct: 437 ILAAIF 442 >UniRef50_C6MZJ1 O-antigen biosynthesis protein n=2 Tax=Legionella RepID=C6MZJ1_9GAMM Length = 419 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 49/403 (12%), Positives = 131/403 (32%), Gaps = 19/403 (4%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 + + F + + + + S+K + + + I R+ ++ N + + Sbjct: 11 VLIVSFFLVLFVFCIPISASLKSISSVFCLTAILFIPHYRKHLFDAFNTLWARVGLVFFA 70 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 ++ S + YL I+ + + + + + + + ++ Sbjct: 71 YVVLACFWSDAPFSMRLSMTDKYLK----LIYLPILAVGFINPKTRRWAFNAYFAIMIVT 126 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL----FL 199 ++ N + V A + + + + + + +L Sbjct: 127 CFVSFLKQKGLVTINNMEDTGEVFHNHIATGFMVALAVYFAGILSFEAHLNKWLRAYYLF 186 Query: 200 LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFN 259 + + + L R +++ ++ L+ K P K L ++ + + Sbjct: 187 MVALGSYQIFFLNTGRTGYVVYGLLISLLLV---QKLPLKKAMIGFTLFCAAIGLIYLAS 243 Query: 260 KPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 +Q R ++D+ TSLG R+ ++ ++F + P + S Sbjct: 244 PLMQVRTAALISDIKFLQQHEENTSLGFRVQFHDYAHSLFNQHPLIGVGTGAFKYSYAR- 302 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY---KKRALGLL 376 ++ A + H++ + G++GI L +LF + K+ L Sbjct: 303 ----DQPVPAWDRKLNDPHSQYWLTLAEHGIIGITLLLLFIGTLFITIFQLSKETRPIPL 358 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 + + G +D I+ ++ ++I L NT+ Sbjct: 359 GILVAFCFGGFTDSILCFSTVGTLLIVFCALGFSELLEKNTVR 401 >UniRef50_B2JE45 O-antigen polymerase n=2 Tax=Burkholderia RepID=B2JE45_BURP8 Length = 432 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 62/407 (15%), Positives = 140/407 (34%), Gaps = 17/407 (4%) Query: 19 MILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSI 78 +IL ++ F++ ++ + ++ + A++ + R + + + + L + Sbjct: 11 LILARTFALVALFAVPLSTAGVNIAASLFAVCALLS--PEVWRNWRAIFTDRVSVAALLL 68 Query: 79 FLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYT 138 + L L W +A + F Y + + + T+ K L Sbjct: 69 AAVLTLSLAWTTADRGHALDFLMKYRKLIYLPLLMLTFRDCRATAWTTVAKWALFGALTF 128 Query: 139 LYSLSFLIAGYAMYINSIH---ENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN-- 193 LS I H + R ++ A T L+ ++ + + Sbjct: 129 ALLLSCSNYFGWTSIGPWHSDTDPIRRAWVFKDHIAAGIMTALLFYLALNFAKHVRSRAA 188 Query: 194 HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP----KKFTSSIVLLIA 249 L+++ A++ VL + Q R ++ + V ++ Y+ S V L+A Sbjct: 189 KAALYVVALLAIVNVLLMMQGRTGQIIAILFIVIYVVTYFVSLRGMKLWVRWGSGVALVA 248 Query: 250 ILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSA 309 + ++V +R E +++++Y +N TS+G R+ Y L + + P Sbjct: 249 VAGTLVYAALHSHGSRLAETNDEISAYETSNKNTSMGVRIVFYRRSLELIGERPVIGHGV 308 Query: 310 ESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 + E + A + HNE + G G +GI +F + A + Sbjct: 309 GTVQEEFDAFARNATGAAAATAGN---PHNEFLLMGIQLGALGIALFVFFLVQIGRSALE 365 Query: 370 KRALG---LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 R +L ++ ++ + + I + + L Sbjct: 366 LREPARTIVLAYLFAFAIGCFANSLLLNFTEGNLFIFLVGIFLSCRK 412 >UniRef50_C6BCQ9 O-antigen polymerase n=1 Tax=Ralstonia pickettii 12D RepID=C6BCQ9_RALP1 Length = 590 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 55/413 (13%), Positives = 135/413 (32%), Gaps = 16/413 (3%) Query: 13 YTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNL 72 + L ++ + ++ F ++ TF + + L ++L N Sbjct: 6 FLLSPLWVVIAMCGMVPFVVAPHSYPLPTFYAEFAAGICWIALAVVVLALTWRNKARLPA 65 Query: 73 ILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKK 132 I L+G+L A ++ S L A G+ L + + Sbjct: 66 IALAPFALVGVLFAQLLIAPPLNPSYSLEATVFLLAAAAACGLGARCRNLPGVLEAFAIG 125 Query: 133 ESVLYTLYSLSFLIAGY-------AMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGV 185 + L+ + A + DR +G S + GI + Sbjct: 126 LVLGGLATVAVELLQLFRVQGLPIAFFSILPAGTDRRMWGNINQPNLLASYLAFGIAASG 185 Query: 186 AILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPII--CVAALIAYYNKSPKKFTSS 243 + + ++ L + L ++L +R L ++ A+ + +++ + Sbjct: 186 FLAHRCRHARIPLALIAVIFLLGMSLAFSRTAWLHIVVLGTLAGAIWTLEQRGWRRWVKA 245 Query: 244 IVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSP 303 V + +L + + L DL + +G R +++ ++F+ P Sbjct: 246 CVPALVLLVTYQLCNWLVAYANIRWHL-DLPTSMGERINEGVGPRAVLWQHAWHMFVVHP 304 Query: 304 FSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSL 363 + A + L + + HN +++ + G++G+ + + Sbjct: 305 WLGGGWGDYAWNQYLQTDQ-----LGRAVMATNAHNIVLDQLAKLGVLGLLAVALPFLGF 359 Query: 364 FYIAYKKRALGLLILTLG-IVGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 + K+RA + LG I+ +G ++ + ++ L ++ R+ Sbjct: 360 VWNLRKRRATPGMAFLLGTILVMGAHSMLEFPLHYLFFLLPFAFALGYLDERS 412 >UniRef50_C5T763 O-antigen polymerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T763_ACIDE Length = 303 Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 42/287 (14%), Positives = 83/287 (28%), Gaps = 18/287 (6%) Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYS-----TMLIGIVSGVAIL 188 + + + + + + +GV Y + +V+ L Sbjct: 3 AFALAMLLVLASVYANIWFDLPWSKTHNQGWGVDHTVVGDYITQSLMMTFLVVVALDRGL 62 Query: 189 YTKKNHPFLFLLNSCAVLYVLA--LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 L + + V L+ R +L +A + + + Sbjct: 63 RAGAMWQRLAWWAAALLAAVSITHLSSGRTGYVLLAAAVLAFSLLATQGWRRW---MALC 119 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 +A V+ + IQ R A+ + + TS+G R+ ++ + K P + Sbjct: 120 ALAAGLVGVVWTSATIQQRVQLAIAEARTSDRMEI-TSIGGRINFWKNTWELIEKRPLTG 178 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 S V F H HN+ + GL G+ L F+ + Sbjct: 179 WGTGSYHVQWCHAVDA----PQWCVFGRWHPHNQFLFFWVEHGLAGLVLFGILVFAPLWA 234 Query: 367 AYKKRALGLLILTLGIVGI---GLSDVIIWARSIPIIIISAIVLLLV 410 A + R +L V L + +W+ I + L Sbjct: 235 ARRARPPQQRLLVSFFVIFLIDSLINSPLWSSRENHFFIFMMAWLAA 281 >UniRef50_Q1N5A2 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N5A2_9GAMM Length = 443 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 60/419 (14%), Positives = 144/419 (34%), Gaps = 24/419 (5%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLIL------ 74 Y + F ++++ + + + IV + + L++ Sbjct: 15 FVFSLYAVFFITLLVLPIVPKGIALLLLLVGIVGFAVYRGKLLIGFSPEERLLIWVFSAF 74 Query: 75 -PLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE 133 +S + S +++++ + + F + + + Sbjct: 75 TFISFISFLVFPYSRMSHYRMEDYATFMLILPMFLLLRQWRFKLNTIVVLFSFVATLLGV 134 Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193 L L+S+ + + N + + GV A +++ + A+++ K+ Sbjct: 135 VSLLQLWSMQSGSGYFMTFDNPMAQFWNRPSGVVNPMRYAAISLIFFAFALNALVFVKRQ 194 Query: 194 HPFLFLLNSCAVL---YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 + L A++ ALTQ R L F + A++ +K + + I Sbjct: 195 SALIKTLLFVAMISAGIACALTQVRGAWLAFFALVFTYGCAFFYLGYRKRVVAFFAVAII 254 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 + V F ++ R ++ Y NS +SLGARL M++ + + P+ Sbjct: 255 VVVSVAQF-DFVEQRIHKTERAFEMYMEGNSGSSLGARLDMFKTAWWLINERPWFGHGLN 313 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK 370 S + + + + + + + HNEI+ A KG++G+ S L L+ + + K Sbjct: 314 SYSANATEIRENTPGMNPEVGRWH-NPHNEILNATVEKGVIGLISMLLLFVAPGLLFLKA 372 Query: 371 R------------ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + + + + GLS + + ++ L + +++ Sbjct: 373 FLVNRGTGSVAYLSFCGISVLIVYFVAGLSVALFEHDIFNHFYVLTVLFLASQVHSHSS 431 >UniRef50_C9KUN2 O-antigen polymerase family protein n=1 Tax=Bacteroides finegoldii DSM 17565 RepID=C9KUN2_9BACE Length = 538 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 40/345 (11%), Positives = 100/345 (28%), Gaps = 28/345 (8%) Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 + + L + + + S + + G + L + ++ + + + Sbjct: 33 LSVDFLFLSFTVFMGYVFVYSLFTSQYIHSVYIVSGWILFVLMRNRKNPTETFNSILAVV 92 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL 200 + + G Y I A ++ ++ + + L+ Sbjct: 93 GVLSALYGLLQYTGYIETQSYFPVTGSFDNPAGFAASIVLCYPFLLCHPSNGKRRMFKLM 152 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 ++ V+ L+ +R +L ++ + Y K K ++ A+ + I Sbjct: 153 ACLLLIIVVILSGSRTGVLTLCVVTLLFYALRYRKLIHKRRIFLISGGALFLISLFIGLI 212 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 ++ S R+ ++++ + + S Sbjct: 213 YLKP------------------ASASGRVLIWKVSAGLCKEHIIQGNGLGSFKADYMPEQ 254 Query: 321 AEHNRLRGA------LEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG 374 A++ A L + H NE + +GL+GI L ++F + Sbjct: 255 AKYLSSSHADESDRILAGNTNHPFNEYLLLLIEQGLIGIVLFLLSLIAVF----RSNVAF 310 Query: 375 LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 L +V I + + + I L +N R + Sbjct: 311 DTPAILTLVSIAIFSCFSYPFKYAFVWFMIIYCLASLNQREVALR 355 >UniRef50_C0WB04 Predicted protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WB04_9FIRM Length = 397 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 40/368 (10%), Positives = 101/368 (27%), Gaps = 19/368 (5%) Query: 42 FSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRA 101 Y + ++ L+ +I R R+ + + L + + + Sbjct: 28 VGNIFYGLAIVLFLVDVIERRRRGETFHLAPHVKHYFWAYAFFALTLLPSALLSPDVSFS 87 Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDR 161 + + ++FL + + L + I DR Sbjct: 88 FGKYLNSIVGRIVVLPMLLFL---DVDEKAIKKALLCFIAFIAFDGLCTFGERLITGADR 144 Query: 162 ISFGVGTATGAAYSTMLIGIVSGVAILYTKKN--HPFLFLLNSCAVLYVLALTQTRATLL 219 A + S + L + H L+ + ++ + TR++ + Sbjct: 145 AHGLGDGWLRHASIVATVFPASIILWLQKAEKISHRNGLLVAAVLIVLGAIGSGTRSSWV 204 Query: 220 LFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNA 279 + + + + + ++ L A I + + R+ S +N Sbjct: 205 GIFVSVILVTAESLRERNSRIVAVLLALSCSFAVIA--ASPALSQRF-------FSISNV 255 Query: 280 NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHN 339 + S G R+ ++ + P ++ +G H HN Sbjct: 256 TTDRSNGDRIEAWKKAAVMIQDKPVFGFGILQGGKAYLAHYRTKADTQGLH-----HFHN 310 Query: 340 EIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPI 399 ++ GL+G+ S FY+ +G + + + Sbjct: 311 IYVQTAVDSGLVGLMGLASWILSSFYLFRHVENPYAFAGFCAWIGFCTVGMFDYTLGMSA 370 Query: 400 IIISAIVL 407 + + + + Sbjct: 371 AVKTLLFM 378 >UniRef50_B9BDB2 Putative membrane protein n=3 Tax=Burkholderia multivorans RepID=B9BDB2_9BURK Length = 356 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 119/352 (33%), Gaps = 19/352 (5%) Query: 83 LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSL 142 + L+ A + +S FR + + + + + + L + S + YT+ Sbjct: 2 AIVLLLPVASILISSAFRGKFAAPMFDSPSRFAAAIPILLLVVHYRFSVGRWLQYTIPIG 61 Query: 143 SFLIAGYAMYINS--IHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFL- 199 + + + DR++ M +G++S +I K+ P L Sbjct: 62 LVITFVQLHFFEGPHFWDGDRMATYFADPLTFGQYMMTLGLMSLASINLFGKDRPPLIAF 121 Query: 200 --LNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 + Y+ + +R L PI+ + + + + + ++A+L Sbjct: 122 KCAAAALGFYLSIRSGSRTGWLAMPIVIAYLALPRRRQLRARNVALALGVVAVLLVSSYE 181 Query: 258 FNKPIQNRYNEALNDLNSY--TNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAES 315 F++ +++R + A D SY + TS G R+ IG + P + Sbjct: 182 FSQTVRDRIDAAQQDYASYHFSGIAPDTSAGLRITFLRIGTYLAATHPLGGLGDTGFESA 241 Query: 316 MNLLVAEHNRLRGALEFS-NVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA-- 372 + A F+ + HNE++ G+ GI STL L+ I + Sbjct: 242 LKAPELAAFASPYARSFALHAGFHNELMTNAVRSGIWGILSTLALFIVPMVIFVRAIRSP 301 Query: 373 ---------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 +GL+ + IV ++V + I L R Sbjct: 302 DRDRVANGTMGLVFMICQIVSGMTTEVFNLKFTASFSAIFIAALCGASIIRY 353 >UniRef50_Q6AN94 Hypothetical membrane protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AN94_DESPS Length = 569 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 48/393 (12%), Positives = 122/393 (31%), Gaps = 23/393 (5%) Query: 38 VDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNS 97 + ++ + I I++ ++ + S+ L+ L L + F + Sbjct: 40 IPSSNMTWCFVALLIASCCYRIIQQKELTLSKTTWFFIASVCLMSLPYLYPENWFADELL 99 Query: 98 PFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAM------ 151 + A + F + + + VL+ + + I G Sbjct: 100 TAESAGRGLGLVAGLLFFIALQQVPKTSGAMFKLSYIVLFGIAIEAIFILGQFFLLTENN 159 Query: 152 YINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN-----HPFLFLLNSCAVL 206 ++N E A++ + + + + ++++ L S Sbjct: 160 WLNYNIEYRPYGVFQQVNVAASFMATGVALSLYLLLQQSRQDSCNSYLKITLLACSLICP 219 Query: 207 YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRY 266 + LTQ+RA L ++ + + Y+ + + L +++ I++ Sbjct: 220 LAVMLTQSRAGTLGLGVVMILGYLGSYSSFKSQLKLRNIWLGLMISGILLG--------M 271 Query: 267 NEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 + V+S+G R A+Y + + P + S A+ Sbjct: 272 ASIQLSKTDGRSLEQVSSMGIRKAIYTRSFKMVTEHPVLGWGYGNFEWSYLNHQAKAYTE 331 Query: 327 RGALEFSN---VHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLG-I 382 + H HNE++ GL+ + L F+ K + + + + Sbjct: 332 DQNIALGPDKLEHPHNELLYWAVEGGLVSVVGIFLLMAYFFWQLRKSKQKLIFLALFAPL 391 Query: 383 VGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 + ++ + + P I+ ++ L + Sbjct: 392 AIHCMLELPFYHAASPWILFIFLIWLTDHSKEY 424 >UniRef50_C9LPH8 O-antigen polymerase family protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LPH8_9FIRM Length = 407 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 58/396 (14%), Positives = 111/396 (28%), Gaps = 25/396 (6%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 IT+++ F + V + I L +IL RQ N N + G+ Sbjct: 9 ITWLIAFCLGAFSCVTRLSIAVGSILQGIAVLCGVILLWRQRNSVQLNKETKGYMAAAGI 68 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 L + ++ IV + + Sbjct: 69 FFLCTLPSALFAGHAEEGLGQFLDMWVWRYMIFLLIVLFVRKRTYLTNMLFAFLLFFGAD 128 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLF--LLN 201 L+ +YI +H DR A ++ + V + + + + + Sbjct: 129 SLLTFIQVYI--LHLTDRGWGFGSNMLAIAGIMCMVLPLCFVVLFDQRFDRKLKYASVWT 186 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 ++ L ++RA L I Y + K ++V I I N Sbjct: 187 MLSIFVGLLSNKSRAAWLTCLITTPVVTGKYIRDNIKY--LAVVGAIMIGFCGFFFANPS 244 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 +R+ N + +N + RL M++ L ++ P Sbjct: 245 YISRFKSVTNTTTNTSNTD-------RLQMWQGCLTMYKNHPVIGVGLGRFKPEYKEYAK 297 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR--------AL 373 H + + H HN + + G +GI L F + + L Sbjct: 298 SHP----EIVRTYSHAHNNFMHLLAETGTIGIAGYLIFIFYSLVHSLRSWLKSKSPYDLL 353 Query: 374 GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 + + G + II S + ++L Sbjct: 354 IFTTILSFMCLFGQVEYIIDNSSAVRLFWFLFAIML 389 >UniRef50_C3QVV3 Predicted protein n=4 Tax=Bacteroides RepID=C3QVV3_9BACE Length = 536 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 95/316 (30%), Gaps = 26/316 (8%) Query: 103 YHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRI 162 Y S + + + I + ++ + + Y+ S H + I Sbjct: 39 YSSIWRVTVLCLIYTCIRIMPKRQCYCLLYIVCIWGITEVIISTLQKVNYLESNHHDFGI 98 Query: 163 SFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC----AVLYVLALTQTRATL 218 + G + IVS I +N + L+ C +LY L L+ +RA Sbjct: 99 TGTFGNPGPLGGLLAVCWIVSIFFIYENIQNKHRILTLSFCMIACFILYGLLLSGSRAGW 158 Query: 219 LLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTN 278 + + L + + +L L I + R Sbjct: 159 TAALVGSMIFLWQWLKRKHTIKVKPTLLKSGFLLIITVFIISIYFIR------------- 205 Query: 279 ANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEF-----S 333 S RL ++ + + P + L AE+ + + Sbjct: 206 ---RDSADGRLLIWYNTIKMIEDYPLFGIGTGGWQANYMLYQAEYFLQATNSPYTLLADN 262 Query: 334 NVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR-ALGLLILTLGIVGIGLSDVII 392 + +NE + + +G++G+ +L+++LF K L + Sbjct: 263 IFYTYNEFLYITAEQGIVGLVVVSWLFYALFSYKEKNNTDHCLKSALTTFLVFSFFSYPG 322 Query: 393 WARSIPIIIISAIVLL 408 + I+ IS I ++ Sbjct: 323 QVFPLEILFISIIGMM 338 >UniRef50_B5LBK8 Putative phosphotransferase LicD4 n=1 Tax=Streptococcus pneumoniae RepID=B5LBK8_STRPN Length = 717 Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 55/442 (12%), Positives = 135/442 (30%), Gaps = 56/442 (12%) Query: 13 YTLKSSMILEIITYILCFFSMIIAFVD-NTFSIKIYNITAIVCLLSLILRGRQENYNIKN 71 + + + I Y + + + + N F + ++ L + K Sbjct: 10 FKINLLFLSVISFYCMAGLIVPLQPISANKFVTLGMTLMGVLLGLYNFFIKKVYLNVRKI 69 Query: 72 LILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSK 131 L L + L + N + Y F + VF + T + Sbjct: 70 EYLILFFLMNILTAALVVKYGFSTNIKNLVVFFIY-------FFAIYPVFQSFTVKKARA 122 Query: 132 KESVLYTLYSLS-FLIAGYAMYINSIHENDRIS-----------------FGVGTATGAA 173 V +++ +++ + +++ + + R+ + + + Sbjct: 123 LFDVFFSVITVANTIGVLVSIWQFFMLQGYRVFDYKGLLIRQGFVESRLFGILASPNYLS 182 Query: 174 YSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYY 233 ++++ I + + K L + + + L+ +R T + ++ + + Sbjct: 183 IISLMVVIYLWMRLSIYKPVLKTLAITSILLNFAYIVLSGSRTTYICLVVVALLYALMTA 242 Query: 234 NKSPKKFTSSIVLLIAILASIVI------------IFNKPIQNRYNEALNDLNSYTNANS 281 N + K + VL+ L + + IQ N N+ + + Sbjct: 243 NWTKKIKSLLTVLVTVGLVFVCYNGIKYSSDIYLKAHSAQIQKNQENGQNGDNNLSLERT 302 Query: 282 VTS----LGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHL 337 TS R A+++ + + P S + E A ++ Sbjct: 303 DTSEENISNNRFAIWQSTASFIPRRPLFGYSGGNWYELGKEYDASAYIIKQHYL-----T 357 Query: 338 HNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK---------KRALGLLILTLGIVGIGLS 388 HN +E G+ G S + K +R L+ + L V I +S Sbjct: 358 HNGYLELLFYDGITGFIPMAIFILSFIVSSLKKYKKDLQEGRRNHELITILLMTVVILIS 417 Query: 389 DVIIWARSIPIIIISAIVLLLV 410 ++ + + I + I+ ++ Sbjct: 418 NLFLSSTFYGISLQGCILFVIS 439 >UniRef50_B8E0S1 TPR repeat-containing protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0S1_DICTD Length = 870 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 53/452 (11%), Positives = 125/452 (27%), Gaps = 36/452 (7%) Query: 2 LTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILR 61 +T L + M+ + F + ++ + + L ++ Sbjct: 12 ITLNHYLRLFVFAFLLLMVFLVPIAQPIFLKLHDISEIPKVTLIRVLGSFALLLWAVWTY 71 Query: 62 GRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVF 121 + + I+ IFL + + F +Y + F + + Sbjct: 72 ILNKRLRLPPKIVSAGIFLFLISWGLSTIFSTNFYLSFFGSYMRQMGFLTYFFYFATFFL 131 Query: 122 LTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEN--------DRISFGVGTATGAA 173 L + ++ +T+ + ++ + RI +G A Sbjct: 132 LYDVIETHTELRYFYWTIVITTVVVDFFGALQLYRLMPWYERVRTESRIISTLGHADFLG 191 Query: 174 -YSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAY 232 + M++ ++ + VL + TR + F + + Sbjct: 192 HFLVMVMPLILALIYQVKNLCLKISLYFLFLLSFLVLLGSYTRGAWVAFLVGIIFYYAFV 251 Query: 233 YNKSPKKF--------TSSIVLLIAILASIVIIFNKPIQNR----YNEALNDLNSYTNAN 280 K K F + ++ L + I K R S Sbjct: 252 LLKEKKFFTSKNKIITLALVLGLGFTVGIFYISETKLYLERKDVGLFSLKERFESIGAGL 311 Query: 281 SVTSLGARLAMYEIGLNIFIK------SPFSFRSAESRAESMNLLVAEHNRLRGALEFSN 334 VT R+ + + +F E+ + + + + Sbjct: 312 GVTQQNPRVLTWRDSVRLFEDKILKSPRIIYGLGPETFSFNFTPYKSLDLARYDRGKGYP 371 Query: 335 VHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR-------ALGLLILTLGIVGIGL 387 HNE ++ +GL G+FS +F+ S+F+ + K + L G + + Sbjct: 372 DREHNEFLDILFPQGLFGLFSFIFIIVSVFFYSIKNYHHINPENRILFLGALTGWISFLV 431 Query: 388 SDVIIWARSIP--IIIISAIVLLLVINNRNNT 417 ++++ S I +++ Sbjct: 432 QGLVLFGLSATYLYFWILTAFIMIFFKLEKKD 463 >UniRef50_A7GHW6 Exopolysaccharide biosynthesis family protein n=11 Tax=Clostridium RepID=A7GHW6_CLOBL Length = 410 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 56/417 (13%), Positives = 132/417 (31%), Gaps = 49/417 (11%) Query: 20 ILEIITYILC--FFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLS 77 + IITY++C F + I + +N ++ L+ + Sbjct: 4 LSNIITYLICSYIFILPILPSKYKYKNIPFNGDVVLLLIIISFIIFIFINGEWRKNFFNG 63 Query: 78 IFLI-----GLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKK 132 + + +W V S + T + + + K Sbjct: 64 MKDFFCKANTIFIFMWVGMMVVSISYSPDKKLALQETIRTSTYIVLFFIIKYEVYKKKYL 123 Query: 133 ESVLYTLYSLSFLIAGYAMYINSIHENDR-----------ISFGVGTATGAAYSTMLIGI 181 + ++Y+ S ++ +Y +S + + M++ Sbjct: 124 DKIIYSYIFTSIIVGFIGIYEYLKGIGLTHKGEFSTVVRCVSTLENSNNLGGFFIMIVFP 183 Query: 182 VSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFT 241 + ++ +K +++L S + + ++ +R L F I + +I + K Sbjct: 184 MMVLSFKEKQKCKRNVYILCSIIAIINIIISFSRNAWLAFVIGYMVLIIVFNFK------ 237 Query: 242 SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIK 301 ++ AIL + V +F I NR E + + + R+++++I + Sbjct: 238 ---LIYGAILGAGVSLFIPKISNRLREIGDVSQNLS----------RISLWKIAWEMVKD 284 Query: 302 SPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF 361 P + + + G + H HN ++A G+MG+ S L ++ Sbjct: 285 KPLLGVGNGNYRTLYPQYYKK-VKYLGYTAQAKFHPHNAYLKAQCELGIMGLISLLGIFV 343 Query: 362 SLFYI-----------AYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVL 407 S + YK G + + + + D A + ++ + Sbjct: 344 SSVWKVSELSKKSNNTFYKYFYKGFIASLIAFMFMNFIDNFFSAPKVIAFFWISLAV 400 >UniRef50_B4SKH3 O-antigen polymerase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SKH3_STRM5 Length = 429 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 37/355 (10%), Positives = 107/355 (30%), Gaps = 15/355 (4%) Query: 79 FLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYT 138 + + + + + + ++ ++ L Sbjct: 69 YGWMAAGMAVMLIGVLTSLAVHGIWKGSEVEKAARLLSMLMILFAALRVPRAILSRALLG 128 Query: 139 LYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF-- 196 + A ++ + T + + + L + Sbjct: 129 TLPAVWSAAAIIGWLALETGVRPATQQFNAVTYGDLTLLFGVLSLLSLGLPVTRFTRIEA 188 Query: 197 -LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 L LL L TQTR LL P + L+ + + + ++A ++ Sbjct: 189 TLKLLTGILGLIAFLWTQTRGGLLAIPCFLLIGLLVMGRRLGRMKILLGL-VLAAGVGVM 247 Query: 256 IIFNKPIQNRYNEALNDLNSYTNAN-SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 + +++R + +N+ + + + TS+ RL ++ + + P R Sbjct: 248 ATHDGALRDRIDAGVNEYGDCSADHLADTSVCIRLQLWTAAGYMIREQPVFGVGGGDRFR 307 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY------ 368 +A ++ + HN+++ + G++G + +Y + + Sbjct: 308 RELERLAAEGKVSAMVARDFGETHNDLLYFLATYGVLGGLGLVLVYLAPALVFLPRLWRG 367 Query: 369 ----KKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 + A L + + G++++++ + + LLL ++ + Sbjct: 368 DERSRLHAAAGLSICVAFAVFGVTEMMLRDMRTASFYAAWVALLLALSEPRSGTQ 422 >UniRef50_C4V4R3 O-antigen polymerase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4R3_9FIRM Length = 454 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 43/364 (11%), Positives = 100/364 (27%), Gaps = 44/364 (12%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 T + + + L + + P +F++ Sbjct: 31 TMQYALIAEAFLIPLVPLAAMAVLLVGCGALCVRLRIDPTFHLRRLPYDAPALLFVVIAF 90 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 + + + Y + + I+ + T + V+ ++ + + Sbjct: 91 LSVAVAP--------NMAFSFYNYSHLVPIYALTYLLTGQTLRSAEDLRPVVISMAAAAL 142 Query: 145 LIAGYAMYINSIH----------------ENDRISFGVGTATGAAYSTMLIGIVSGVAIL 188 L+ Y Y + R+ A ++ ++ Sbjct: 143 LVILYGFYQFVFGIDISAMKWVDGASFPELSKRVFSTWENPNILAGYLDIVVCLALGLAA 202 Query: 189 YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI 248 L L+ L L +T R L+ I+ + + ++L I Sbjct: 203 ALPGWRRGLALVLLVMALACLGMTYARGACLVIGILLAGYGVLRDWR--------VLLGI 254 Query: 249 AILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRS 308 ++ + V+ F+ + +R + TS RLA +E + + + PF Sbjct: 255 VVVGAGVLFFDPVLSDRLLSVFTRV--------DTSSEMRLAFWESTVAMILDHPFLGIG 306 Query: 309 AESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY 368 + VH HN + + G+ G + L+ +F A+ Sbjct: 307 WGMYFMVYPEY----DFYLQGAPVQIVHAHNMYLNYAAEIGVPGALAFLWFFFGSMIHAF 362 Query: 369 KKRA 372 + Sbjct: 363 RLPR 366 >UniRef50_C6PW82 O-antigen polymerase n=3 Tax=Clostridium RepID=C6PW82_9CLOT Length = 411 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 57/426 (13%), Positives = 135/426 (31%), Gaps = 46/426 (10%) Query: 18 SMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLS 77 ILE + YI +II + I A++ L+ ++ K + S Sbjct: 1 MKILENVLYIFMCIYIIILPWQQGKTTYGDGILALIILIYILKLILSSKSRQKMFLDIKS 60 Query: 78 IF--LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 F + + + + + S + +A+ + + K + Sbjct: 61 FFHDYLSISMSVLFLVMIISTSYAFDKKIALNESARFLSYVILFFIIKYECNYKRYIRGI 120 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISF-------------GVGTATGAAYSTMLIGIV 182 + + F I + +Y F A+ + + + Sbjct: 121 INSYVFSVFSICVFGIYQYFTGFGLSAEFMKYSYTDKKIEATLDNPNNLGAFLVLALFPI 180 Query: 183 SGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTS 242 + I K ++ L S ++ + LT +R + I + I + K Sbjct: 181 IMLTIYEKNKIKKSIYSLISMIIVVDIVLTWSRNAFIGVAIGAIILAIIFSWK------- 233 Query: 243 SIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKS 302 ++ I A+++ +F I +R + N + +R+ +++ L + + Sbjct: 234 --LIFIIGPAAVISLFIPKISHRILDIAN----------SSQNESRIYLWKTALKMIKEH 281 Query: 303 PFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFS 362 P + + V ++ L+ F++ HN ++ S G++GI S + + Sbjct: 282 PILGVGNGNYVSLYDTYVKKYPELKY-PWFTHRPSHNSYLKVTSELGILGILSFVCMLVF 340 Query: 363 LFYI-----------AYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 Y+ G+ +G + +SD + + + + I Sbjct: 341 SLLRVKQAASSAKDKLYRYFCTGIFASMVGFYFMNISDNLFFVPKTTAYFWILLAISQAI 400 Query: 412 NNRNNT 417 R ++ Sbjct: 401 VIRESS 406 >UniRef50_B7IG67 O-Antigen Polymerase family n=1 Tax=Thermosipho africanus TCF52B RepID=B7IG67_THEAB Length = 1079 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 45/372 (12%), Positives = 107/372 (28%), Gaps = 38/372 (10%) Query: 20 ILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF 79 IL I +L + K +T + ++ L + + + + Sbjct: 6 ILFQIAIVLVALFASPKYTYEFSVPKYAILTLFMSIMFTYLAFKWIKEKKISFYITPAHI 65 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 + L + + + ++ A +F + + + + K+ + Sbjct: 66 VWFLFSISSVISSFNVLRDNPFYFRRSIDIALYVVFNALLAIFISSEYKEKKRIHMFLLT 125 Query: 140 YSLSFLIAGYAMYINSIHENDR-------------ISFGVGTATGAAYSTMLIGIVSGVA 186 + ++ + +N I VG A ++ ++ Sbjct: 126 FMITGFVISIDALLNFYGGYSMFLGNVGEAFSRAAIKSTVGNVIFTANYIDMLLPIALYF 185 Query: 187 IL---------YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSP 237 IL + ++ + ++QTR+ L I+ +I Y Sbjct: 186 ILSNEISFKGFWQVAFLKIFAFVSFAIGFVAVIVSQTRSEYLAIIIMTSLYVIMYLIWRK 245 Query: 238 KKFT-------------SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTS 284 K V LI + IVI+FN ++ + ++ +SV+S Sbjct: 246 GKKVNEEIPKKVRAITRYLFVSLIVLSIIIVIVFNTDNPLTNGGKVSMTSRFSAMSSVSS 305 Query: 285 LGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVH---LHNEI 341 R + L ++ + + E+ L + + HN+ Sbjct: 306 KDERFLSWFTSLELWEDHKIFGSGIATYQLLSISKMGEYLEKHPELYYGWNNFKRAHNDY 365 Query: 342 IEAGSLKGLMGI 353 + G++G Sbjct: 366 FQVLGETGIVGF 377 >UniRef50_A0YU97 O-antigen polymerase n=3 Tax=Cyanobacteria RepID=A0YU97_9CYAN Length = 466 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 45/411 (10%), Positives = 117/411 (28%), Gaps = 40/411 (9%) Query: 36 AFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVD 95 + FS+ + TA++ +L + G + + + I LL L+++ Sbjct: 53 VLISLVFSLAPFVGTALIGVLLIACAGFWVLLTLCDDPSETAFTPIHLLVLLYWGVAVTA 112 Query: 96 NSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINS 155 + + K+ ++ + + + + + +++ Y + Sbjct: 113 TALSPVKAAALSGLIKLTLYLILFFLMARILRSPRIRSIFITFYLHIVLIVSIYGLRQWF 172 Query: 156 IH---------------ENDRISFGVGTATG-AAYSTMLIGIVSGVAILYTKKNHPFLFL 199 + R+ +G A Y ++ L L Sbjct: 173 FGVEASATWVDPTSAQADLIRVFSYLGNPNLLAGYLLPACAFSVAAMFVWEGWLPKALGL 232 Query: 200 LNSCAVLYVLALTQTRATLL---LFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 + L LT +R + L+ + + + F + I I + Sbjct: 233 TMTVVNSACLVLTFSRGGWIGFVALMFTLAVLLLYWLSINFSPFWRQWAVPIGIGSLAAF 292 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 + I + S +S R+ ++ L + P + A + Sbjct: 293 LILAVIT--VPALRLRVASIFVGREDSSNNFRMNVWAAVLEMIQDRPILGIGPGNNAFNK 350 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA---- 372 + R +S I+E G++G+ L+L + + + Sbjct: 351 IYPLYMRPRYSALSAYSV------ILEIAVETGIIGLTCFLWLLVVTLHQGWLQLQRLRE 404 Query: 373 ---------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 + + +G++ G D + + + + + ++ R Sbjct: 405 LRNTQGLWLIAAIATIIGMMAHGSVDTVWYRPQVNTLWWLMMAIVASFYQR 455 >UniRef50_Q8A281 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A281_BACTN Length = 536 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 113/365 (30%), Gaps = 27/365 (7%) Query: 60 LRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFI 119 L + IL + L I + + + + L F Sbjct: 6 LLPKIGMRYKVLYILAFLLCANSLFLQIESPIITIGDKWYASIILLLLFLIANSTFSMSS 65 Query: 120 VFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTML- 178 +L L S VL + L+ +I H +S G A S Sbjct: 66 FSWSLNKLLPSFYIIVLLSDVVLAMHGILQYTHIIPFHSYLGLSGSFDNPAGYAASLCAG 125 Query: 179 IGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPK 238 V + + Y K +L V+ V+ L+ +R +L ++C+ + + Sbjct: 126 FPAVFYIYMHYCSKLIRGSVILAGLCVIIVVVLSGSRTGILSIAVMCIVCFLQKTEIGSR 185 Query: 239 KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNI 298 K ++LL+ + ++ F S RL +++ + Sbjct: 186 KKYLLLLLLLFPVFVTLLYFF---------------------KKDSADGRLLIWKCSALM 224 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSN-----VHLHNEIIEAGSLKGLMGI 353 +P + + + AE+ +++ H NE I GL+G Sbjct: 225 IKDNPVTGYGSGGFLANYMNYQAEYFARDTDNKYAMLAGDVKHPFNEYILLVVNYGLIGF 284 Query: 354 FSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 L + L+ + L I T+ ++GI + + S P + + I + VI Sbjct: 285 LLFLTFVYFLWKCYRRNSCLETNIATVCLIGIAVFACFSYPLSYPFVWVMMIYSIYVIIF 344 Query: 414 RNNTI 418 I Sbjct: 345 HAGYI 349 >UniRef50_Q5ZXB0 O-antigen biosynthesis protein n=4 Tax=Legionella pneumophila RepID=Q5ZXB0_LEGPH Length = 416 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 50/381 (13%), Positives = 117/381 (30%), Gaps = 16/381 (4%) Query: 41 TFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFR 100 I I +++ +L + Y L + L + + S Sbjct: 29 PTIKSICFICSLIAVLITPQYRKHIVYAYNTLWGRAAFCLFLFVVIASLW-SPAPYSMQW 87 Query: 101 ATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEND 160 Y + I + + + + + + ++ +S L A N I D Sbjct: 88 MVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFITCVISILKA-----KNIIASED 142 Query: 161 RISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLL 220 + + +A + + VL + R L+ Sbjct: 143 PGEVFYNHIITGFMVALAAYLAGLLAFQSSGWLRLIYIFMILLTSYQVLFINTGRTGYLV 202 Query: 221 FPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN 280 + + L+ K K + ++L + + ++ + +Q R + + D+ N Sbjct: 203 Y---FILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPVMQTRIYDLIQDIKLLKQHN 259 Query: 281 SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNE 340 TS+G R+ + + +K PF S + V + + + H++ Sbjct: 260 KNTSIGYRMQFHHYAKQLMLKHPFIGIGTGGFKYSYSQDVPVPSWGKELTD-----PHSQ 314 Query: 341 IIEAGSLKGLMGIFSTLFLYFSLFYIAYK--KRALGLLILTLGIVGIGLSDVIIWARSIP 398 + +GL+G+ + SLF +++ LL + +SD I+ + Sbjct: 315 YWMTLAEQGLIGLVLLIIFLASLFITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAG 374 Query: 399 IIIISAIVLLLVINNRNNTIN 419 +++ L + Sbjct: 375 YLLVVMSALCFGELIEKRRVK 395 >UniRef50_UPI000185C723 O-antigen polymerase family protein n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C723 Length = 823 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 35/416 (8%), Positives = 106/416 (25%), Gaps = 32/416 (7%) Query: 11 KPYTLKSSMILEIITYILCFFS------MIIAFVDNTFSIKIYNITAIVCLLSLILRGRQ 64 +P + + + + M F +V L+ I R+ Sbjct: 16 QPQDTSIKWLATFLLIAYGYVTVITPNWMAFDSNATKFYTFAILNLVVVALVFFIKEFRE 75 Query: 65 ENYNIKNLI---LPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVF 121 + + ++ LI ++ L+ +S + + + ++ + +++ Sbjct: 76 RTQVLFGFFTNKMGIAYSLIMVMALLSFSKAINTEEAILHFFKIFTAFSAAWMVSALVIY 135 Query: 122 LTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGI 181 + + ++L L + + + + A+ + I Sbjct: 136 YKEGIVVLALAMTILLCYDFLVAMDGIKGVIRGTATDLAIKGSYSNKNILASAIFIKIPF 195 Query: 182 VSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA-------LIAYYN 234 + + + + + TR L + V Sbjct: 196 AVWLFYFRRENYLRLIGAVGLTLGTLAVFFMSTRTFYLATILTVVIFVIYGAIDFFILKR 255 Query: 235 KSPKKFTSSIVLLIAILASIVIIFNKPIQN---RYNEALNDLNSYTNANSVTSLGARLAM 291 + V L+ I I + R + + + S R Sbjct: 256 RETGVKVLIHVGLVVIAFGIFSFVQNYLYPQEVRQSTSFGARLAEVANQENASNNLRKTA 315 Query: 292 Y-EIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGL 350 + ++ P + ++ + + HN+ +E + G+ Sbjct: 316 WVITATDMIPNDPLLGVGIGNWKVRFLQYENSYSPHYIYMYKN----HNDFLELTAEVGI 371 Query: 351 MGIFSTLFLYFSLFYIAYK--------KRALGLLILTLGIVGIGLSDVIIWARSIP 398 +G + + ++ + K ++ + G+ + + P Sbjct: 372 LGGLAFVAIFLLAAFYFIKGTYKNKNSEQEQWFFLPLFGLFAYSFDAFFNFPQDRP 427 >UniRef50_C0QH03 O-antigen polymerase involved in exopolysaccharide biosynthesis n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QH03_DESAH Length = 776 Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 103/347 (29%), Gaps = 31/347 (8%) Query: 86 LIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFL 145 L +++ + + I IFG + F ++ +K ++ + ++ + Sbjct: 121 LSYWAFYVLTVQLLTNKTRLKRTIIVITIFGGLLSFSSILQFYLTKDMALWFWHVPVNSM 180 Query: 146 IAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP----FLFLLN 201 I G + N + F V A Y + ++ + Sbjct: 181 IVGPYICHNHYAGLMEMIFPVVLALFFFYRPRMANTTLLQGVIQILSQEKANIHLIIGGA 240 Query: 202 SCAVLYVLALTQTRATLLLFPIICVAA--LIAYYNKSPKKFTSSIVLLIAILASIVIIFN 259 + ++ + ++ +R ++ + V L+ S I +++ SI Sbjct: 241 ALLIVTSVFVSLSRGGMISLCLSLVFFTFLLFRRKISRGNTLLIIAVIVVAALSIAWFGW 300 Query: 260 KPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 I +R+++ N + R ++ L I + + + Sbjct: 301 DQIFDRFSKLKNAQGVIHES--------RFDFWQDSLGIIRDFFWVGSGFGTYIDIFPAY 352 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR-------- 371 + + H HN+ IE GL+G +LF Y + Sbjct: 353 QTVY------GALTINHAHNDYIEMVVEGGLVGFLLAAAFIVTLFSKTYSRFMQRKDAYC 406 Query: 372 ---ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 +G + + + G +D + + + L + N Sbjct: 407 VYIYMGSITGLVAFLFHGFTDFNLHIAANGLWFFFMAGLAVSAANTK 453 >UniRef50_D1B406 O-antigen polymerase n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B406_SULD5 Length = 417 Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 62/402 (15%), Positives = 139/402 (34%), Gaps = 16/402 (3%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 LE +T+ +++ F ++ L+ ++G E +LP +F Sbjct: 16 LEKVTFYSLLLFVLLLPFSKAFMSFCVFYFPLLLFLNFGIKGIWERLKCIPAMLPFFLF- 74 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 I Y + V + + L + + L LK + L++L Sbjct: 75 ------IGYMSVTVLWTERFVQANGLLKLYFLLSLIPSLALLVKKEWLKPLVVAFLFSLS 128 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN---HPFL 197 S L G+ + I +++ + M +G +S + I+ T K F Sbjct: 129 VSSALSMGHYLEWWQIRGQAQLNTSPFMNSIHYSVFMAVGAISTLYIMITLKRDRVKQFG 188 Query: 198 FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 L S ++ L L+ R L F + +I + + K S +V + I A + Sbjct: 189 LLALSLLLIVTLFLSNGRTGQLSFLVAL-CWMIVMFFRGNMKLLSGLVFTVFIAAYGIYN 247 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 Q R + D+ TS+G RL+ + + I ++ P ++ Sbjct: 248 GVPQFQKRIDTIFVDVQKMKQGVWNTSIGLRLSYWLLAKEIVLEHPLLGVGYGDYKLAVE 307 Query: 318 LLVAE---HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK--RA 372 + + + LH++ + GL+G+ ++ +L+ + + Sbjct: 308 EALQKNDFGIEAKAKAFLITNDLHSQYLMVVVQGGLIGLVLFVWFLIALYRLPIQNPVYK 367 Query: 373 LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 L+L + + ++ + + + L + ++++ Sbjct: 368 RLSLLLLSIYIIGCFPEPLLILLNPLTLFAFFVGLSMAVSSK 409 >UniRef50_Q1ZHF3 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZHF3_9GAMM Length = 555 Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 71/416 (17%), Positives = 143/416 (34%), Gaps = 35/416 (8%) Query: 13 YTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNL 72 + L I +I+ ++L M ++ S IV + +L + Sbjct: 3 FKLSIQTIYKIVFFLLMAVGMHYVQINRGGSGLALPQNNIVWIFISLLISLGLYQVSRIK 62 Query: 73 ILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKK 132 L S F I L I + + + + + +++ G+ + Q++ KK Sbjct: 63 TLYYSHFSIAFLIAIVFFCVPL---IYANNTLAIQSASRLLGLGAGFLVFLSFQQMRFKK 119 Query: 133 ESVLYTLYSLSFLIAGYAMY-------------INSIHENDRISFGVGTATGAAYSTMLI 179 +L+ L + A AMY I R A Sbjct: 120 SDILHLLIFIVLAGALQAMYSLIQSYLLSEHNFIGYDIHYGRPYGVFQQPNVLASFMATT 179 Query: 180 GIVSGVAILYTKKNHP-FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPK 238 I+S + L+++ ++VL LTQ+R+ L I Y+ K Sbjct: 180 LILSAYLLSKVHCQKQHVFLLISAFLCMWVLVLTQSRSGYLGLLIALAFVAPLLYSAHKK 239 Query: 239 KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNI 298 +F ++ L S ++ + +Q+R E + S G R+ +Y + + Sbjct: 240 RFFFLLLALSL-GLSCALLKDDALQSRSLETMQ------------SGGPRITLYTQSMQM 286 Query: 299 FIKSPFSFRSAESRAESMNLLVAEH--NRLRGALEFSNVHLHNEIIEAGSLKGLMGIFST 356 ++ P S +S A+ A + H HNE + G+ +F+ Sbjct: 287 ILEKPLLGYGYGSFPKSYLFAFAKSVSQDEFSAQQGYLTHPHNEFLFWAVEGGIAPLFAI 346 Query: 357 LFLYFSLFYIAY---KKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 L L + + +K+AL L + I+ +++ ++ +I + +V + Sbjct: 347 LILCVAFLRLLRTQKRKQALAFCALVIPIIVHTQTELPLYQSAIHWFTLLFLVFYI 402 >UniRef50_Q8F4F2 Putative uncharacterized protein n=1 Tax=Leptospira interrogans RepID=Q8F4F2_LEPIN Length = 803 Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 53/438 (12%), Positives = 128/438 (29%), Gaps = 58/438 (13%) Query: 25 TYILCFFSMIIAFVDNTFSI-KIYNITAIVCLLSLILRGRQENYNIKNLILPL-SIFLIG 82 T L F + + + SI +I+ T I+ L ++ + +P + I Sbjct: 11 TVSLISFGLFLFSFPLSVSISQIFGATTILSTYPLFFLEKKLKQVWDKIQIPFYTFLGIY 70 Query: 83 LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFI--VFLTLTSQLKSKKESVLYTLY 140 +L ++ SPF + + ++ F + + L+ Sbjct: 71 ILLFLFSIFQSESYSPFFKKFLKQSESGDFWMLLIFPASFLIASIEKNHKTLRKFLFISA 130 Query: 141 SLSFLIAGYAMYINSIHE-----------NDRISFGVGTATGAAYSTML----------- 178 +++ L+ +++ DR+ G+ + Sbjct: 131 TITILLGCISLFSEVRIGKFVANGFKYAPGDRLQHFSGSIGPIKLYLPIGMMNTHLTFGG 190 Query: 179 --------IGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALI 230 + I + + + +L Q+R+ L + + ++ Sbjct: 191 LLGLFLPGLFIDWIQSFQQKRSFVFGFKTILMLIGFIILFFNQSRSVWLGVIYVLLLLIL 250 Query: 231 AYYNKSPK-----KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSL 285 + PK K S ++L+ L+++ N + R + ++ N Sbjct: 251 SLRKHLPKISLKTKMISGLILISVFLSTVYFFRNNWLIQRSISQIFQTHNTEN------- 303 Query: 286 GARLAMYEIGLNIFIKSPFSFRSAESRAESM-----NLLVAEHNRLRGALEFSNVHLHNE 340 R +Y+ + + K F + + N++ E H HN+ Sbjct: 304 -QRYYIYKNTIPLLSKHWFIGIGGGNYKDFHWKESSNMIQKEEQLWYELYITPRGHAHND 362 Query: 341 IIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA------LGLLILTLGIVGIGLSDVIIWA 394 ++ G+ L + LF ++ L I L + G + Sbjct: 363 LLHFIVTGGIFSGILFLLFWGRLFGSFFQNDYNTQNGISILTIGILSLFPAGFFQCYLLD 422 Query: 395 RSIPIIIISAIVLLLVIN 412 + + + + L + Sbjct: 423 DEVVLPFFAFCGIFLGSS 440 >UniRef50_B4WP88 O-Antigen Polymerase family n=3 Tax=Cyanobacteria RepID=B4WP88_9SYNE Length = 480 Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 41/431 (9%), Positives = 113/431 (26%), Gaps = 43/431 (9%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 + S +L I F + + S + + L + L Sbjct: 45 QGSWLLAWGDGIAWVFVAALIALAPYVSTTLIGWLLLASAGLWFLLTVSDQAEGWLTPLH 104 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 + + ++ + V + K+ + + ++K + + Sbjct: 105 IGVVAYWGAMVLATALSPVKMAALSGLI-------KLTLNVLLFMLTARILRIKELRSGI 157 Query: 136 LYTLYSLSFLIAGYAMYINSIH---------------ENDRISFGVGTATG-AAYSTMLI 179 + + + +++ Y + R+ + A Y + Sbjct: 158 ILVYLATATIVSVYGLRQWFFGAEALATWVDPESNLSGATRVYSYLRNPNLLAGYLMPAV 217 Query: 180 GIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKK 239 G + + + L + + L LT +R L F + ++ Sbjct: 218 GFGAMAVFAWKRWLPKLLAAVVTVVSSGCLVLTLSRGGWLGFLAMAFVMILLLIFWGKSL 277 Query: 240 FTSSI-VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNI 298 F+ + +L ++ + S S +S RL +Y + Sbjct: 278 FSPFWRRWALPLLLVGSMVMVAAAVVMVPPVRERVMSIFAMRSDSSNNFRLNVYAAVFEM 337 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 P + + L ++ + ++ E G++ + L+ Sbjct: 338 IQARPVVGIGPGN------EAFNQVYPLYQRTGYTALSAYSIYFETLVEGGVVAGLALLW 391 Query: 359 LYFSLFYIAYKKRA-------------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAI 405 + F + +G + +G++ G D + + I + + Sbjct: 392 MLVLAFQQGWSHLRQLRQNLEKEGYWLIGAIASMVGLLVQGAFDTVWYRPQISTLWWLLL 451 Query: 406 VLLLVINNRNN 416 ++ Sbjct: 452 GIVASFYVEAR 462 >UniRef50_A1HP47 O-antigen polymerase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP47_9FIRM Length = 412 Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 51/421 (12%), Positives = 127/421 (30%), Gaps = 58/421 (13%) Query: 20 ILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF 79 IL+ + + T S A++ + L R + Sbjct: 13 ILDYLIEHCIIAVAFFLPLSLTASSVFLGGGALLWAGKMALARRLALRPTPLDGPIALLV 72 Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 + ++ V + Y+ Y + I + + + +++ + Sbjct: 73 ALSAASVL------VSPDRSFSFYNYYHLMGRYII---IYYLVVNNVHSLEQLKRIVWAV 123 Query: 140 YSLSFLIAGYAMYINSI-----------------HENDRISFGVGTATGAAYSTMLIGIV 182 + ++ Y Y + S A + M++ + Sbjct: 124 LVSAAVVTAYGFYQYIYGIDISAFEWVDGEQFPDLKVRVFSTLQNPNLLAGFLVMIMALA 183 Query: 183 SGVAILYTKKNHPFLFLLNSCAVL-YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFT 241 +G+A+ L +L L LT +R L + + + + Sbjct: 184 AGLALRGAHSVPRRLAFAIFIGLLGVCLVLTYSRGAWLSVLAVIGVYGMLHNRR------ 237 Query: 242 SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIK 301 I L+ ++ + V+ + + R +N + TS R+A++E + + + Sbjct: 238 --IFWLLLLIPAAVLPAHDAVLERLLSIIN--------PTDTSSTLRIALWESTVAMIMD 287 Query: 302 SPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF 361 P + + H HN ++ + G+ G + L + Sbjct: 288 RPLLGIGWGAYWLVYPEY----DFFVQDAGTKIFHAHNLYLQIAAEIGIPGFVAFLTVMA 343 Query: 362 SLFYIAYKKRA-----------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 +A + LG++ +G+ GL+D I++ + ++ +++V Sbjct: 344 GHARLAVRLIGNAGDQWASALMLGVVAALVGLAVNGLTDHILFNIQLSMLFWLLNAMVVV 403 Query: 411 I 411 + Sbjct: 404 V 404 >UniRef50_A9KDI8 O-antigen ligase n=6 Tax=Coxiella burnetii RepID=A9KDI8_COXBN Length = 436 Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 48/401 (11%), Positives = 130/401 (32%), Gaps = 31/401 (7%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 T +L + + T + ++ + ++ L S + + + + L +F+ + Sbjct: 23 TGVLLAATAFSVPLSTTATCILFPLATLLSLFSDPWYKKWRAISSHPVAIVLILFIALYV 82 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 +YS R +H + T+ + ++ + + + +++ Sbjct: 83 IAAFYSVAPN-----RDIFHQFSKTSN-LLCAVILIGFSCEPPWRRYILNAFLIAMTITL 136 Query: 145 LIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAIL---------------Y 189 ++ + N + L+ I + + + Sbjct: 137 GLSYIKYFFNPLLFFSTPFGKSSVFKDHIIQNFLMVITAFIFLYRSLTPVAPTFKLRTPN 196 Query: 190 TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIA 249 N +L A+ L + R+ +F + + Y+ + +++ Sbjct: 197 KWLNRWIYGILAFVAIFNALFINDGRSGYFIFAALLFFSGGLYFGW---RGFLVALIMAV 253 Query: 250 ILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSA 309 +L+ + F+ + R E + + Y + TS+G R+ + +F + P+ Sbjct: 254 LLSGLAYHFSDQFRWRITELVQNTERYQKGEANTSVGIRIQSIKNAYFLFKQRPWLGHGT 313 Query: 310 ESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 + L E + G + S N + G G++G+F L + + +Y Sbjct: 314 GGFHTAYATLPPEKTQATGDMRLSY----NSYLNVGIELGIVGVFLLLMNFLIQWKYSYS 369 Query: 370 ---KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVL 407 + L +G+V L + + + + + + Sbjct: 370 ISGDYRYFMQALLIGMVIGCLGNSWLSDTTELHLYALFLGV 410 >UniRef50_C5CEM9 O-antigen polymerase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEM9_KOSOT Length = 936 Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 49/437 (11%), Positives = 130/437 (29%), Gaps = 40/437 (9%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 L + +I + + ++ + ++ + +G + + +++ L + F Sbjct: 7 LFYLLFIAGSSLFAVKGITWDMALPKFFYASVFLAALFVAKGMRLSKQPQSISLSIPHFF 66 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 + + + + + + L + + I+F S+ L ++ Sbjct: 67 AVVYAVYGILSSFLLLRTIPEAFATSLGFSLSLL--VLILFSIHISEKSVNGILWLLQIF 124 Query: 141 SLSFLIAGYAMYINSIHEND-------------RISFGVGTATGAAYSTMLIGIVSGVAI 187 L +I + N IS VG ++ + Sbjct: 125 VLFGVIIAVDALLGFYTGNSIFWGILGQPLMRGNISSVVGNVNFTTDLMGMLLPIVLYLA 184 Query: 188 LYTKKNHP------FLFLLNSCAVLYVLALTQTRATLL----LFPIICVAALIAYYNKSP 237 + T++ + + L V+ QTR F ++ + L K Sbjct: 185 IITRRLWRNERARVLFYTITYALFLSVVLAGQTRGVYYSLIGAFLVVLLGVLAGMQKKVK 244 Query: 238 KKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLN 297 K ++++ ++ +I + +++ + ++ R +++ + Sbjct: 245 PKIRPLSLVVLLVITIFLIYGYSTDSIFTRGTFSISERLSSSANKSAADFRTFLWKTAIK 304 Query: 298 IFIKSPFSFRSAESRA----ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGI 353 + S S E+M ++ E R +++ H E + + GL+G+ Sbjct: 305 QWENSKILGTGFGSYKYFSSENMGRVLNEEPRYMYIAGLNSIRAHGEYFQQLAETGLIGL 364 Query: 354 FSTLFLYFSLFYIAYK-----------KRALGLLILTLGIVGIGLSDVIIWARSIPIIII 402 L SL ++ L IV + ++ + Sbjct: 365 SLVLLALGSLVLYYFRIIFRLKDFDLLLLFSVLAGSFSVIVLHSVVSFPAHFMPNALLAV 424 Query: 403 SAIVLLLVINNRNNTIN 419 + L R+N+ Sbjct: 425 TVAGAALSPVFRSNSFQ 441 >UniRef50_A4TQL0 O-antigen biosynthesis protein n=31 Tax=Yersinia RepID=A4TQL0_YERPP Length = 410 Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 50/396 (12%), Positives = 127/396 (32%), Gaps = 25/396 (6%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 +LC + ++ + + ++ +++ ++ ++SLI+ + ++ L PL + L Sbjct: 16 MLCSIAALLLGISMPTNNQLMSVSLVLIIISLIINRKSLDF-KPLLTSPLVYLPAAMFVL 74 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 + S +NS Y I F + +L V + L Sbjct: 75 LALSLLYQNNSYGPDMVGKYKKLLYILPLALFFMNQPRLIKLFCTGFLVANAVILAGSLA 134 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVL 206 G S + + T + + + +A + +L A Sbjct: 135 VGVLHIPLSGVDPTNPTIFKLQITQNFFMALAALLWLVLAFQHQGWKRWGYSVLVVAASY 194 Query: 207 YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRY 266 +L L R + + L + ++V+L A+ + +I +R Sbjct: 195 SILFLVLGRTGYVALIVGLGVWLFFSLGNRQR---LTLVVLGALAFAALIFIPNKATDRI 251 Query: 267 NEALNDLN-------SYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 + ++++ + +S+G R A + +SP A Sbjct: 252 VQGVDEIKVCMAASATDAADACNSSMGQRSAFVVEAARLIKESPILGHGAGGFYYENKE- 310 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR---ALGLL 376 +++ + HN+ + G++G+F L + + +++ LL Sbjct: 311 ----------VDYKVNNPHNQYLLETIQSGVIGLFIFLAWVICCYRVIWQQTPALRNVLL 360 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 + + + + S + + + +L + Sbjct: 361 AVLTSYMACNFFNSFLLDSSEGHLFMIFVAVLAGYS 396 >UniRef50_C8XEV0 O-antigen polymerase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XEV0_NAKMY Length = 668 Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 34/247 (13%), Positives = 79/247 (31%), Gaps = 20/247 (8%) Query: 175 STMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYN 234 + + + + L+ + +++ + LTQ+R + I V + Sbjct: 189 LILFTPMSLSLLAMSKSWRDRVLWGGATVSLMLGVYLTQSRGGFIALFIGLVMWAVLAGG 248 Query: 235 KSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEI 294 K V LI I+ I +R + S + + S+ R Sbjct: 249 AYRKALLYLPVALIVIV------PLTGIGSRLGTLTA-VVSGSTTTADPSVVTRKRFQLD 301 Query: 295 GLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIF 354 ++F+ P + S N HN +E + G++ + Sbjct: 302 AWHMFLDRPITGHGIGSYGGLFAEYDRLANFYEPVNIVVA--AHNFYLEQAADGGVVLLI 359 Query: 355 STLFLYFSLFYIAYK-----------KRALGLLILTLGIVGIGLSDVIIWARSIPIIIIS 403 F + ++ ++A + R L + G++G ++ V + +++ Sbjct: 360 CWAFFFGTILFVALRTMIGAGRTGDDTRRFLALGVIGGLIGWLIASVFLHLSDFRALLLI 419 Query: 404 AIVLLLV 410 A++ V Sbjct: 420 AVIAAAV 426 >UniRef50_Q5LB39 Putative membrane protein n=9 Tax=Bacteroides RepID=Q5LB39_BACFN Length = 562 Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 42/373 (11%), Positives = 108/373 (28%), Gaps = 60/373 (16%) Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTA----KIFIFGSFIVFLTLTSQLKSK 131 L + LL ++W + + + A ++ +F+ + Sbjct: 16 LLAMVCALLSVVWVNDPMLPAGELSGQWLYLAKVAMGAAVGWVVSAFLYYRKGYDMGADF 75 Query: 132 KESVLYTLYSLSFLIAGYAMYINS-----IHENDRISFGVGTATGAAYSTMLIGIVSGVA 186 + V+++ L+ A Y + H ++ + +I + Sbjct: 76 YQVVIWSFIVLAASEAIYGLRQLYGFTSSHHSLYSLTGSFFNPGPYSGYLAMIFPLCLDQ 135 Query: 187 ILYTKKNHPFLFL---------LNSCAVLYVLALTQTRATLLLFPIICVAAL-------- 229 L +K ++ +L VL +R+ + I + Sbjct: 136 WLRLRKRENKNWMEWTGYYGAVAVLFLILCVLPAGMSRSAWVAALISGIWVYGVHKSWPV 195 Query: 230 ----IAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSL 285 + K+ +S++ ++ ++ + + S Sbjct: 196 RLKRVWMRKKTKVLAVTSVLCIVVLVGGVCLFNL---------------------KKDSA 234 Query: 286 GARLAMYEIGLNIFIKSPFSFRSAESRAESM----NLLVAEHNRLRGA--LEFSNVHLHN 339 RL M++I + PF+ + A + AE + + S + N Sbjct: 235 SGRLFMWKISSRAIAEKPFTGYGQGNFALAYGTSQEAYFAEGSYSPQEELVAGSPEYAFN 294 Query: 340 EIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPI 399 E ++ G+ + L + + G + ++ S + +P Sbjct: 295 EYLQIALEWGIPVLLCCLAFAGFCLRRGVELKRWGPCGSVISLLVFAFSS---YPMQLPA 351 Query: 400 IIISAIVLLLVIN 412 +I+ ++LL+ Sbjct: 352 FVIAFLILLMACI 364 >UniRef50_Q6MMF8 Putative O-antigen ligase WaaL n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MMF8_BDEBA Length = 419 Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 60/422 (14%), Positives = 139/422 (32%), Gaps = 30/422 (7%) Query: 14 TLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGR--QENYNIKN 71 ++ +S + S+ I V+ + ++ ++ I L+ +E + +KN Sbjct: 2 SINTSKFTSTLILAFFPLSLAINLVNFFWMDTVFILSTIGALVWAKRSHSDLKEVFGLKN 61 Query: 72 LILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSK 131 L + + + + Y + + F S L + + Sbjct: 62 KTLIILLLIYFFSGITGYVLHSPMQTNEWVKISNLRWIWGFFACYSVGHILAAQGKKRFD 121 Query: 132 KESVLYTLYSLSFLIAGYAMYINSIHE--NDRISFGVGTATGAAYSTMLIGIVSGVAILY 189 + L L +I + + R+ A + + + ++Y Sbjct: 122 HRHFIVLLTVLLAIIVSHLNLTSGAFFSPGVRLQGFYSNPAFFAMAAVALWASLIPYLIY 181 Query: 190 TKKNHPFLFLLNSCAVLYVLAL-TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI 248 L L V+ + T TR++ + + + L NK K + Sbjct: 182 NHSKASGLGAAALLTCLTVILIATYTRSSWIAMVAVLIFTLFYTKNK---KAILVAGFAL 238 Query: 249 AILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRS 308 + A+ V+ +++R + S S GAR+ ++ +IF+ P Sbjct: 239 SAAAAAVLFNLFQMKDRILQTF--------DFSGVSQGARIEIWNATWHIFLDHPIFGVG 290 Query: 309 AESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY 368 ++ L + +L + + H HN+ ++ S G++G+ L ++ + F + Sbjct: 291 ---FEYAVKLYKEYYIKLGQSTAYIPGHAHNQFLDVLSGAGIVGLIGYLGVFGAGFVFFH 347 Query: 369 KKRA-----------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 KK LG L+ + + G ++ I + ++ + +R Sbjct: 348 KKFKSATDILSKQLSLGSLLCIVALFGCSFTETPIIQQETRNYVLIILGFSYGYLSRGAG 407 Query: 418 IN 419 N Sbjct: 408 TN 409 >UniRef50_A4WU00 O-antigen polymerase n=4 Tax=Rhodobacter sphaeroides RepID=A4WU00_RHOS5 Length = 433 Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 54/410 (13%), Positives = 124/410 (30%), Gaps = 24/410 (5%) Query: 10 LKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNI 69 L+P+ +I T +L F +++ + L ++ R + + Sbjct: 6 LRPHRHDGMIIDVCPTTVLAFLTILCLLLVQWIGSMAAAGFLASGCLLVVRRPQTTLMEL 65 Query: 70 KNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLK 129 + + +I L ++W + ++ I S IVFL Sbjct: 66 RRYWMIFAIAAWCLFTVLWSQYASLSLRYGIQLCVTFAIAVAIASRLSPIVFL------- 118 Query: 130 SKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILY 189 +L++ + ++ +++ + + FG A ST+++ + + Sbjct: 119 ----RILFSAHLIAAVLSLVFGKVRADGLGWLGIFGSKNAFSLPMSTLMLCAFAIMLDRN 174 Query: 190 TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAAL-IAYYNKSPKKFTSSIVLLI 248 + L ++L Q+ LL AL + Sbjct: 175 QSRMWRLLAAGGFLIGTFLLIQAQSAGQLLATGAALAFALPFFLGRWLSFAQRILLAGFT 234 Query: 249 AILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRS 308 L +V I +Q + +L R ++ + + PF Sbjct: 235 VGLGIVVAILLVAMQEEVMALI-----LETTGKDATLTGRTELWALAFREIAQQPFLGVG 289 Query: 309 AESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY 368 ++ N + G H HN I G++G+ F +A Sbjct: 290 YQAYWVPGNPGAEAMWKEFGISGKRGFHFHNTFISNAVEIGIIGVAMQAVAIFGALALAT 349 Query: 369 -------KKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 + ++ L L + + +S+V+ + + ++ L+ V+ Sbjct: 350 IWAFKEPRAESIFLTALMMRSTVLSMSEVVGYLQFDLATLMLVAALVYVL 399 >UniRef50_A4G2D6 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2D6_HERAR Length = 402 Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 59/400 (14%), Positives = 132/400 (33%), Gaps = 28/400 (7%) Query: 31 FSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLI-WY 89 + F I + ++ ++L+L G P+ +GLL + Sbjct: 17 IILSFLPFTLFFPIGVGYAGMLLFFVALLLNGDYRGKWQTVKNSPMFWPTLGLLLVTCGA 76 Query: 90 SAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGY 149 F F + Y N ++V L S + + ++ + A Sbjct: 77 GLFLTRPDGFWKAFMHYQN---------YLVLLLFISVGGGRWQQRALYVFFAGAVYAAT 127 Query: 150 AMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVA-------ILYTKKNHPFLFLLNS 202 Y+N + A ++LIGI+ G+A I + + Sbjct: 128 LFYLNYFQLLPDWAIFQNYIQYAGNKSILIGILLGIAGGWMLNEIFSRRDGKLLMIAAFL 187 Query: 203 CAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPI 262 + +TR I A++ + + + I L++A+ Sbjct: 188 YISFALFVFAKTRTG--SIIFILGCAIVMLRYLTLSRRSLLIALVLALAMGGAWQNAHDF 245 Query: 263 QNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE 322 + R + D+ ++ V++ G RL MY I +I ++ P + + Sbjct: 246 RERLTGTVQDVKAFMQGGQVSAEGIRLEMYRITGDIIMERPLGGHGIGTWVINYEERAKG 305 Query: 323 HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK---KRALGLLILT 379 A HN+ + + G++G+ + L+++ + +A + + L + Sbjct: 306 LPSETMAT------PHNDYLLYAAEIGILGVLALLWIWVTQLVVAVRVGGDAGVRLFTIG 359 Query: 380 LGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 + I+ G+ + I+ I + + + L +R+ Sbjct: 360 VAIMFGGMVNAIMRDALFGIAFMLLLSIPLAGISRSRYSQ 399 >UniRef50_A9A0F8 O-antigen polymerase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A0F8_DESOH Length = 754 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 49/371 (13%), Positives = 113/371 (30%), Gaps = 60/371 (16%) Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 I + + + ++ F K+ L L L Sbjct: 96 IGILLPDQAWPLTLNLHATLFELCRWLLWVGFYWLSVQLLSDKTMLRRTLLFLAFFGGLF 155 Query: 147 AG-----------YAMYINSIHENDRISFGVG-TATGAAYSTMLIGIVSGVAILYTKKNH 194 A +A++ + +N + A M+ G V + + + Sbjct: 156 ALSSILQNIFTEDHALWFRYVPDNSMVFGSYVCHNHYAGLMAMIFGPVLALVLAHRPPRQ 215 Query: 195 P-------------------FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNK 235 L ++++ + + + +R +L + +A + + Sbjct: 216 FGSPREKVLGFFEEEETPLFILLIVSAAVIAMSIFASLSRGGILSLCASMLFFALALFGR 275 Query: 236 -----SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLA 290 + S+++LL A++A++ + I NR+ + Y N S G R Sbjct: 276 AFPDRRINRRASAVLLLCAVIAAVTWFGWERIDNRFAKI------YAADNFTDSEG-RFH 328 Query: 291 MYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGL 350 + L + P + + + + L H HN+ +E + G+ Sbjct: 329 FWADSLKMVSDFPATGVGFGAFGNVIPAYQNRY------LGRILDHAHNDYLELLAEGGI 382 Query: 351 MGIFSTLFLYFSLFYIAY----KKRALGLLILT-------LGIVGIGLSDVIIWARSIPI 399 G+ L + LF K++ +++ L I+ G++D + + + Sbjct: 383 PGVVLALAFFICLFKTVRKVLKKRKEPYTILVCAGTATGILAILLHGVTDFNLHIPANAL 442 Query: 400 IIISAIVLLLV 410 + LL Sbjct: 443 YLAFLCGLLAA 453 >UniRef50_A8GCN8 O-antigen polymerase n=8 Tax=Enterobacteriaceae RepID=A8GCN8_SERP5 Length = 418 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 49/398 (12%), Positives = 109/398 (27%), Gaps = 33/398 (8%) Query: 28 LCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENY----NIKNLILPLSIFLIGL 83 L F+ + S + NI + L+ L+ R + + LP +F + Sbjct: 19 LFTFTAFLLGASLPTSNPLMNIALGLALVCLLWRRDTRQIGALASHPLVWLPALMFALLA 78 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 L L+ ++ + Y + F + L Sbjct: 79 LSLLTHTHDYGPKMVGK-----YQKLLYVLPLALFFLADRRLLTHFVSGFVWANALILAI 133 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC 203 L G D + T + I Y L Sbjct: 134 SLAGGLGHVTLGGLNPDNPTVFKLQITQNVFMAFAALIWLSRTFEYRGLLRWGYAGLVLL 193 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQ 263 A + VL + Q R + L+ +K +++ + +++++ Sbjct: 194 ATVNVLLMVQGRTGYVALATGMGTWLLLTLR---RKQLITVLACGTLAIAMLVMTPNRAM 250 Query: 264 NRYNEALNDLNSYTNANSVT-------SLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 R + + A++ + S+G R A +++ ++P A S Sbjct: 251 ERLTLGVQQIQGCVLASAESAYRACDNSMGQRTAFAREAIHLIKQAPLLGNGAGSFWYG- 309 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR---AL 373 + + HNE + + GL+G+ L + + ++ Sbjct: 310 ----------NADTGYGVHNPHNEYLLQTAQTGLLGLMVFLTWMWGCYRAGWQLPTHCRT 359 Query: 374 GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 + + + L + + S + + L Sbjct: 360 LFVAVLSSYMACHLFNSFLLDSSEGHLFVIIAAWLAGF 397 >UniRef50_B2KDP3 O-antigen polymerase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDP3_ELUMP Length = 612 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 52/406 (12%), Positives = 128/406 (31%), Gaps = 19/406 (4%) Query: 23 IITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIG 82 +I + F + ++ ++++T I I+ + N ++ I ++ Sbjct: 18 VIAPLFFFTDLTQNPFQIQTNVLMFSLTGI-----FIINAKDFLVNKQDKAFFFFIAVLF 72 Query: 83 LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSL 142 L I K + + S ++ + K ++V+ TL Sbjct: 73 LTWFISLLLAKNYYETIKYSILSNGFILFVWAASYVAGKSIKENGSNLKLKTVINTLLIT 132 Query: 143 SFLIAGYAMYINS-----IHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL 197 F+ A Y + + N R S+ L+ + L+ + N Sbjct: 133 GFIAAFYGLAQKAGGEVIWPGNIRAGVISTFGNPNFLSSFLVVLFFPALYLFLENNKKAF 192 Query: 198 FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 + + + L R++LL V L+ +S K + + A++ +++ Sbjct: 193 YGVVLLVYALFIILCGARSSLLALAGGMVLFLVYAPFRSYIKQNKKQLGIFALILVVILT 252 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMN 317 T V S R+ +++ IF +P + + Sbjct: 253 AFPAQNKFSKINEVKDILKTERPMVQSYDQRIMLWKGAFKIFTSNPAAGAGWGNFQLFYA 312 Query: 318 LLVAEHNRLRGAL---EFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY------ 368 + E + L + HN I + + G++G+ + +F + Sbjct: 313 VKQGELLAQKPDLYVFKVQGNAAHNFIFQLLAESGVLGLATFIFFVVIFGKRSVSYFTKK 372 Query: 369 KKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 K + L + + + +++ I + +L ++++ Sbjct: 373 TKNRDMVFALLVSLAAMFADNMLNITLFITMPAFLFFFILGILSSE 418 >UniRef50_C7I561 O-antigen polymerase n=1 Tax=Thiomonas intermedia K12 RepID=C7I561_THIIN Length = 509 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 53/416 (12%), Positives = 124/416 (29%), Gaps = 30/416 (7%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIF----L 80 L ++ + N T ++ L + N + + PL + Sbjct: 95 LLALVIIYYPLSKLYPVLIAPGINGTNLLELFLISFWVMHAYKNQRKMFNPLPFTRLVGI 154 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 L +I ++ L+ F + Q K+ ++ + Sbjct: 155 WFFLSVISVFTAIYHIGLHPFIWNYLLSARGFFDQFIIFFLVVNLIQDKNMARRLIVYMM 214 Query: 141 SLSFLIAGYAMYINSIHEN------DRISFGVGTAT-GAAYSTMLIGIVSGVAILYTKKN 193 + +I Y ++ + R+ +G AA + + Y + Sbjct: 215 FSAAVIFLYGIHEWWLTRGASSIEKSRLLGPIGQPNEFAAQIIYSLAPLLAYGAYYFPRW 274 Query: 194 HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 + L VL +R L F + KS K F ++++ I Sbjct: 275 KSWRLAPIVLIGLKVLLAAFSRGAYLAFAMELATLSFV---KSKKFFVLVLLVIGTIYFF 331 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 I + ++ R + D + + S +R +++ + + + P + + Sbjct: 332 IPALVPNSMKARVAQTYQDHEA--DLKIDKSADSRFLLWDAAIEMAKEDPIFGKGFDQFH 389 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY----- 368 + V N + A S G+ + + L + +L + + Sbjct: 390 SLVPSYV---PGFYEGSTGDATDNQNMFLYAASNMGVPSLITLLLIIGALAFRGWSIYKK 446 Query: 369 ------KKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTI 418 + LG + L G+V + + I S+ + + I ++ + + I Sbjct: 447 STVDIDRIIGLGAVTLVAGLVAVNMFGTHIIDTSVDVFLWIYIAIVAHLFDPKQLI 502 >UniRef50_B1ZQU0 O-antigen polymerase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQU0_OPITP Length = 717 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 43/321 (13%), Positives = 85/321 (26%), Gaps = 29/321 (9%) Query: 69 IKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQL 128 L L + ++ W V +R + ++ + + L Sbjct: 127 HPASWLVLPFLVYAAANVAW--ISPVPWLGWRDWFGWAQLGIMFWVALNGVRSPAARGTL 184 Query: 129 KSKKESVLYTLYSLSFLI------AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIV 182 + + T L R S G A +L+ Sbjct: 185 FTLLLLLGLTAVVLGCYQRFVRPDWLMLGRTQVQQFVGRASGSFGIPNSLAALLLLLLPP 244 Query: 183 SGVAILYT--KKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 L LF + L L LT +R + ++ VA + S ++ Sbjct: 245 CCALALRRGASAVQRVLFGYVAVVFLLGLGLTVSRGAWISLAVVLVAWPLFARGGSWRRR 304 Query: 241 TSSIVLLIAILASI---VIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLN 297 ++ L +I ++ R+ + D + R ++ Sbjct: 305 LGWTAVVGVTLGAIALTAFFQVDLVRERWIKLKQDSGELS----------RPILWRGAWR 354 Query: 298 IFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTL 357 IF + P A S A + + HN+ + S G +G Sbjct: 355 IFAEHPVWGSGAGSFAVAFEKHRPATFQDDPLW------AHNDYLNTLSDYGAVGFTLCF 408 Query: 358 FLYFSLFYIAYKKRALGLLIL 378 + + + A++ R G Sbjct: 409 GAWAVVGWGAHRARKRGRTGF 429 >UniRef50_A4BIW8 RfaL protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIW8_9GAMM Length = 381 Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 49/286 (17%), Positives = 109/286 (38%), Gaps = 17/286 (5%) Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193 L ++ +IA + M ++ R + T A L V ++++ ++ Sbjct: 67 HWLIAGMGVAVVIALFYMVFLTLDGQSRPKVNMNQITSANLMVYLGFAVVAFSMVHVFEH 126 Query: 194 HPFLFLLNSCAVLYVLAL-----TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI 248 + L + + AL +++R L P ++L + + +IVL+ Sbjct: 127 KGSRWWLVVGGSVLLAALIAAVLSKSRGAWLSVPFFVGSSLWLFRQHFKRWQLVAIVLVT 186 Query: 249 AI-LASIVIIFNKPIQNRYNEALNDLNSYTNANSVT-SLGARLAMYEIGLNIFIKSPFSF 306 + ++ + P+ R E ++D N Y VT S+ RL M+E + F +P Sbjct: 187 VLGGLTVAYLPGSPVLPRIQEGISDANRYFTTGEVTRSIDTRLNMWETAIEAFKLNPLFG 246 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 S + + E + ++ H H++ + + +GL+G+ + F+ Sbjct: 247 LS----EKGLQKFEREGGVAKYLEKY--GHQHSDFFDILAKRGLVGLAFFYGFWAVFFWA 300 Query: 367 AYKKRALGL----LILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 + G ++L +G + GL++ + ++ LL Sbjct: 301 FNGYTSPGYREAGILLGVGYLVFGLTETTTGNYAAMSLLAVQTALL 346 >UniRef50_B3C9M5 Putative uncharacterized protein n=8 Tax=Bacteroides RepID=B3C9M5_9BACE Length = 571 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 117/390 (30%), Gaps = 67/390 (17%) Query: 64 QENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLT 123 + + + + + L + P T ++ K +F S + + Sbjct: 3 KIQTYKIKTAVMVLLLFAAICSLQSLACATTPELPSGETVGQWVWLGKAVLFSSGCILIA 62 Query: 124 LTSQLKSKK------------ESVLYTLYSLSFLIAGYAMYINSIHENDR------ISFG 165 QL K V ++L L + A + + Sbjct: 63 SFLQLFGKAYREDALEFRHFYAYVAWSLVLLGGVEAVWGLCQLYGFSVSGHSRYALTGSF 122 Query: 166 VGTATGAAYSTMLIGIVSGVAIL--------YTKKNHPFLFLLNSCAVLYVLALTQTRAT 217 A Y M++ + + + K ++ +L VL T +R+ Sbjct: 123 FNPGPYAGYLAMVLPVCLHLYLRICGWKGMPARYKIEKGAAAVSGMLILCVLPSTMSRSA 182 Query: 218 LLLFPIICVA------------ALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNR 265 + I C L Y K + + I L++++ A+ + Sbjct: 183 WVAAAISCAWVAYMHRDKRKWSILWRRYKKRYVLWGAGIFLILSLAAAGMFFLKP----- 237 Query: 266 YNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF---SFR-SAESRAESMNLLVA 321 ++LG R M+++ P+ + A A+S+ Sbjct: 238 ----------------DSALGRRF-MWKMTCRAIAAHPWGCPTGFACAYGEAQSLYFASG 280 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLG 381 + + S + NE +E G+ LF+ F +I K R G+ + Sbjct: 281 NYASWEERVAGSPEYAFNEYLEVALTYGVAMCILVLFVIFGCLWIGVKLRRYGICGALIS 340 Query: 382 IVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 ++ S + +P I++AI LLL Sbjct: 341 LLVFSFSS---YPLHLPAFIVTAICLLLAC 367 >UniRef50_Q11IK5 O-antigen polymerase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11IK5_MESSB Length = 426 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 61/407 (14%), Positives = 144/407 (35%), Gaps = 33/407 (8%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 +L ++ V + ++ A + + + R ++ G + Sbjct: 21 VLLSIAVACLVVKVKLDVLLFGFFAGIGIYLITGMHRSIRSIDPVYATGACLYA-GCAIV 79 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 I + Y YL G ++ L + + ++ L +F + Sbjct: 80 IGLIHGNLPEEIRWIGYPLYLLLGITLFPGVVLIKDPLRQIVLGARAGLILALVVGAFEM 139 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVL 206 G RI G A A+ +++G++S + + + P L A L Sbjct: 140 VG---------GLVRIGLGGNAANT-AFVIVVVGVLSRMPVRNPPRFLPNSRLWFYLAAL 189 Query: 207 YVLALTQTRATLLLFPIICVAALIAYYNK--------SPKKFTSSIVLLIAILASIVIIF 258 + +T TR+ L +F + + L A + S + +++ L +I Sbjct: 190 -AVIMTGTRSVLPVFALGLLFDLFAMRRQLANGALRMSLRSAAVVMLVFFLGLGAIGYEL 248 Query: 259 NKPIQNRYNEALNDLNSYTNANSV-----TSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 I NR + +++S T L RL +++ + + P + Sbjct: 249 AGSIANRVDYTFAEIDSTMQNPGEEDAPLTGLEIRLTLWQKAIEVIRSHPLIGSGGD--- 305 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK--- 370 SM ++ + + A +H+HN +++ ++G++G+ L + ++ + + Sbjct: 306 ASMREIIRSTPQEQRATFSPYIHVHNFVLDELRVRGIIGLVVMLGFFLAVCWRLWASGLP 365 Query: 371 -RALGLLILTLGIVGIG-LSDVIIWARSIPIIIISAIVLLLVINNRN 415 ++ ++ G L +++ R++ +I I + LLL + Sbjct: 366 EIREATVLFFASLLTYGALHGLLLADRNMALIAIFLVSLLLYLKKEA 412 >UniRef50_C9QDI3 O-antigen ligase n=1 Tax=Vibrio orientalis CIP 102891 RepID=C9QDI3_VIBOR Length = 399 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 60/398 (15%), Positives = 142/398 (35%), Gaps = 17/398 (4%) Query: 34 IIAFVDNTFSIKIYNITAIVCLLSLILR-----GRQENYNIKNLILPLSIFLIGLL---- 84 ++ F++N ++ + + ++ + + +L R + L L +F ++ Sbjct: 1 MLNFINNRKAVSLLFLAPVLWITTGMLWDGDGDMRLVPIVLVIAALSLFVFRFAIIKDNL 60 Query: 85 -DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVL-YTLYSL 142 W ++ Y Y ++ ++FL LT+ +S + + L+ Sbjct: 61 KSSFWVKLLFINGLFGALAYEVYGFDSRELRATLVMLFLFLTTPKNFYTKSAMQWLLFIA 120 Query: 143 SFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNS 202 S + Y+ Y R + + A ++ G+ + ++ + + ++ Sbjct: 121 SISCSSYSYYYQINVSLFRGEWPINAIPFATICGLVSISSLGLLLTRFEEKNTIVLIVAV 180 Query: 203 CAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPI 262 + L L+Q+R L+ ++ + Y + + LL ++ + I Sbjct: 181 TLSMAGLLLSQSRGPLIALIVVVFLL-LLYVSYRKNWALCVLTLLCLVVGVGGLFKLPVI 239 Query: 263 QNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE 322 Q+R + + + + +S+G RL M IG+ ++ ++P + + L E Sbjct: 240 QDRIERTIQEYHLIEQGHLNSSIGVRLQMVGIGIELWQRNPMLGYGKD-IKIEFDKLEYE 298 Query: 323 HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK----KRALGLLIL 378 ++ HN ++ L GL+G L F + A + + A+ L Sbjct: 299 KRITPSLNRLISMTFHNGYVDKFVLYGLLGGLIFLTFLFYPIWKARQYTIERGAVLLWAP 358 Query: 379 TLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 L + SD I + I + +I + Sbjct: 359 ALFVAICNFSDAPFINSQAAIYYMFIIGSVTMILSNEK 396 >UniRef50_Q475L7 O-antigen polymerase n=5 Tax=cellular organisms RepID=Q475L7_RALEJ Length = 607 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 43/440 (9%), Positives = 139/440 (31%), Gaps = 37/440 (8%) Query: 8 HSLKPYTLKSSMILEIITYILCFF----SMIIAFVDNTFSIKIYNITAIVCLLSLILRGR 63 + I ++T+ ++ +A ++ + L + ++ Sbjct: 8 RRMPQSRTTIPAIFLVLTFAFPLLVSRHTLPMATFYGEWAAAAVFLLLAGLLTAFAIQSS 67 Query: 64 QENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLT 123 + + I L ++LI L + S F AT + A + + Sbjct: 68 RGSNANIPWIASLPLWLIILGAIQSASGFDDITGSRFATQLTLGLGAALMLAVWHYRSSA 127 Query: 124 LTSQLKSKKESVLYTLYSLSFLIA-------------GYAMYINSIHENDRISFGVGTAT 170 + +++ L + + + ++++R +G Sbjct: 128 SPDARLAITDALATAFLLAGLLGTISQWVQLFHLESRSFGLVSSYFYDDNRRLWGNLNQP 187 Query: 171 GAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALI 230 + + +V+ + K ++L+ + + L+ +R +L + + A+I Sbjct: 188 NHQATLEGMALVAATWLASRGKLRFPMWLIAVVLLESGIVLSGSRTGVLHVGLAALYAVI 247 Query: 231 AYYNKS-------PKKFTSSIVLLIAILASIVIIFNKPIQNRYNEA-LNDLNSYTNANSV 282 A + P + + +++ + ++++I I+ N ++ + Sbjct: 248 AAWLARDTRRDVDPMRRPAGLLVAGVAMVAVLLILQPIIKAAGNAFDWRLFDTLAQLQAA 307 Query: 283 TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEII 342 + AR A++ +F P+ + +++ G ++H HN ++ Sbjct: 308 DQMSARSALWTHAWAMFRSHPWLGVGWGEFGWAQFQQLSQV----GVKVEMSLHAHNAVL 363 Query: 343 EAGSLKGLMGIFSTLFLYFSLFYIAYK--------KRALGLLILTLGIVGIGLSDVIIWA 394 + + G++G + + + + +++ + + ++ + Sbjct: 364 DLLAKTGIVGTAGVALVLIGWLWRVVRVGIWHADNEERAQAIVVLTWLAMLCAHSMLEYP 423 Query: 395 RSIPIIIISAIVLLLVINNR 414 + +L + R Sbjct: 424 LHYLYFFLPFCFMLGWLEPR 443 >UniRef50_Q1QJM5 O-antigen polymerase n=4 Tax=Bradyrhizobiaceae RepID=Q1QJM5_NITHX Length = 434 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 50/383 (13%), Positives = 131/383 (34%), Gaps = 20/383 (5%) Query: 45 KIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYH 104 I+ + + L+ I + + ILP++ F++ L +W ++P+ A H Sbjct: 59 AIFAVIWLFALVPTIEPTLLQLFKRPICILPVAFFVLALAGTLW------SSAPWTARLH 112 Query: 105 SYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAM-----YINSIHEN 159 + AK+ + I +S+ + + L + L + A + + Sbjct: 113 AVGPLAKLLVIPLLIYHFRRSSRGQWVFTAFLVSCALLMIMSWIVAFDPRLALKSGAYYG 172 Query: 160 DRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLY-VLALTQTRATL 218 I + + A + + +L + L L+ + + + ++ + +R L Sbjct: 173 VPIKNYIDQSQEFALCAVALAYPVVHLLLQKRIKEAALLLIVAVSFVANMMFVVVSRTAL 232 Query: 219 LLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTN 278 + P++ + + ++ + ++ + +Q+R + + Y Sbjct: 233 VTMPVMLGIFMFL---HLTPRRMIAVSCTTLLAGVVMWFASPSLQSRVASFSSQYDQYET 289 Query: 279 ANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLH 338 ++ TS+G RL + L F+ +P + S A GA + H Sbjct: 290 SDQATSIGLRLEFWRKSLRFFVDAPLAGHGTGSVQGLF---TAAAVGQTGAAAEVVNNPH 346 Query: 339 NEIIEAGSLKGLMGIFSTLFLYFS--LFYIAYKKRALGLLILTLGIVGIGLSDVIIWARS 396 N+ + A G +GI ++ + L++ + L + ++ Sbjct: 347 NQTLNAAVQWGSLGILVLYAMWLFHLSLFRGTSLADWVGLLVVAQNMMTSLFNSHLFDFH 406 Query: 397 IPIIIISAIVLLLVINNRNNTIN 419 + + + + + + + Sbjct: 407 EGWMYVLGVGVAGGMVLQTRAVE 429 >UniRef50_B4RIX1 Possible integral membrane protein n=21 Tax=Neisseria RepID=B4RIX1_NEIG2 Length = 642 Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 51/427 (11%), Positives = 126/427 (29%), Gaps = 19/427 (4%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 M + +P IL +I + + A ++ L L Sbjct: 1 MSAETTVSGARPAAKLPIYILPCFLWIGIIPFTFALRLKPSPDFYHDAAAAAGLIVLLFL 60 Query: 61 RGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIV 120 ++ +++K + +F + W+ ++ N + + ++ Sbjct: 61 TAGKKLFDVKIPAISFLLFAMAA---FWWLQARLMNLIYPGMNDIASWVFILLAVSAWAC 117 Query: 121 FLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINS-------------IHENDRISFGVG 167 + + + ++ + L+ + I +H + +G Sbjct: 118 KSLVAHYGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWENTPLLQNIIVHRGQGVIGHIG 177 Query: 168 TATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVA 227 + M GI++ + +K L + VL L +R L I + Sbjct: 178 QRNNLGHYLMW-GILASAYLNGQRKIPAALGAICLIMQTAVLGLVNSRTILTYIAAIALI 236 Query: 228 ALIAYYNKSPKKFTSSIVLLIAILASIVIIFN-KPIQNRYNEALNDLNSYTNANSVTSLG 286 Y+ + + + A+ + + F+ I + + AN + Sbjct: 237 LPFWYFRSDKSNRRTMLGIAAAVFLTALFQFSMNAILETFTGIRYETAVERVANGGFTDL 296 Query: 287 ARLAMYEIGLNIFIKSPFSFRSAESRAES-MNLLVAEHNRLRGALEFSNVHLHNEIIEAG 345 R + + L F +P S A+ + +H L H HN I++ Sbjct: 297 PRQSEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQHTIHDNFLSTLFTHSHNIILQLL 356 Query: 346 SLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAI 405 + G+ G + K+ + L + + + ++ + + Sbjct: 357 AEMGISGTLLVAATLLTGIAGLLKRSLTPASLFLLCALAVSMCHSMLEYPLWYVYFLIPF 416 Query: 406 VLLLVIN 412 L+L ++ Sbjct: 417 GLMLFLS 423 >UniRef50_A9AJI5 Putative O-antigen polymerase n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AJI5_BURM1 Length = 446 Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 33/322 (10%), Positives = 92/322 (28%), Gaps = 20/322 (6%) Query: 104 HSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRIS 163 ++ ++ + +++ ++ L + L + S R + Sbjct: 107 KAFDAPLRMLLAIPVLLYFHQRRIDFARIVGYAAPLCLFAMLAEVWLDPAASGQWGGRYA 166 Query: 164 FGVGTATGAAYSTMLIGIVSGVAIL----YTKKNHPFLFLLNSCAVLYVLALTQTRATLL 219 +++ ++ K L + + ++ + TR Sbjct: 167 TYFVDTDTFGVYGLVLTGFCLFSLRIAPNGGSKISAAWQLFGALVGIVLIIGSGTRTAWY 226 Query: 220 LFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNA 279 P++ L + ++ + ++A + + ++ I R ++++ + Sbjct: 227 AVPVVFALWLWLNRRSARLRWLLVCIAVLAAVLVL----DREIAARLLSGYHEIHQWLVG 282 Query: 280 NS-VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLH 338 TS G RL M+ + +F P+ ++ H Sbjct: 283 TRRDTSAGLRLTMWHMSWELFKHRPWGGYGDTGYLAFLDQPWIASIAPISQAMAIEHGPH 342 Query: 339 NEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK-----------RALGLLILTLGIVGIGL 387 NE++ G+ G + L + ++ LGL+ + IV Sbjct: 343 NELLANLLRSGVGGGVAVLCQFLIPLMFFARRCYAADDAVKEASRLGLIYIVCVIVMSVG 402 Query: 388 SDVIIWARSIPIIIISAIVLLL 409 ++ + + L Sbjct: 403 FEMFTLKYTASFYGLVIACLGA 424 >UniRef50_C6I0F5 O-antigen polymerase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0F5_9BACT Length = 444 Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 53/396 (13%), Positives = 115/396 (29%), Gaps = 27/396 (6%) Query: 29 CFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNI--KNLILPLSIFLIGLLDL 86 + + + FS + I ++ L +++ R Y + LIL L +F+ L L Sbjct: 45 FYVLFSVFVFNMPFSEALKEIFLVLSFLLIVIHLRDRAYEPAPRILILGLPVFIFALSSL 104 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 + + R + +F + ++ L + + Sbjct: 105 LSALHSINTHQALRGFWGDLETLMSWVVFAGAFLLFPDRTRTLRISLVALAAGLAAGAAV 164 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVL 206 Y M + ++ G ++ ST + + + FL + Sbjct: 165 GLYKMVALGDPNMEMMNLGDKNSSAQFISTSFLLFLGAWTLPKLSGLTGRFFLPVLLLLS 224 Query: 207 YVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRY 266 L L +RA L+ P+ A L+ + ++ + + + + Sbjct: 225 GSLILCHSRAFLISLPVASAALLLLGRHWK----------ILVGTLAAMAAGAALLYSLS 274 Query: 267 NEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL 326 ++ S S +R + L IF P ++ + + Sbjct: 275 PHLRWEMASVIAPARDGSFTSRYETWAGALRIFHDHPLLGVGPDTFQMANIHKIYHLPDY 334 Query: 327 RGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIG 386 H HN GL+G+ S + F + + L + +G Sbjct: 335 AS-------HGHNIFFNLLGEYGLLGVLSFALILFLWSGRVLRDKDPSETGRLLKGLTVG 387 Query: 387 LSDV--------IIWARSIPIIIISAIVLLLVINNR 414 +W S ++ + + +LV R Sbjct: 388 FLLNLLLAGLAHPMWGGSFSLLFMFIMAYVLVTEER 423 >UniRef50_C3WC59 Predicted protein n=3 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WC59_FUSMR Length = 413 Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 124/361 (34%), Gaps = 32/361 (8%) Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 L+ L+ F + ++ ++ L + ++ I + ++ S+ Sbjct: 60 YILVILVLLPIFSLFSAGGTHSFQRALEKSYRYLPIFSIPLFITSERVIKIILSLFSLSI 119 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF---- 196 +SF+ + + N R+ A+ + ++ I+Y K + Sbjct: 120 FISFINGIFFYKKLKWNFNARLISFSSHPLDEAHILAMGSLLLLALIIYNIKFKKYKELP 179 Query: 197 LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 ++LL L L +TQ R L F + KK V+L+ +L + Sbjct: 180 IYLLAFILALIALVMTQGRGAWLGFLGGLFVVVFLLMKN--KKLFIVGVILVGVLGVGAV 237 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 NRY + + + TS RL M+E +++F + ++ ++ Sbjct: 238 TSKGLENNRYIKRFESIQNLE----DTSNKIRLFMWESSIDMFKNNLPFGVGRDNASKYA 293 Query: 317 NLLVAEHNRLRGALEF----------SNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 + ++N+ + +LH+ + +G++ F + ++ + Y Sbjct: 294 LEYMEKNNKYDEMEHKWAKSHLKQIAGSGNLHSMYFTTLAEEGIL-AFPFIGMFLFILYR 352 Query: 367 AYK-----------KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 ++ +G + + + + G ++ + +++ ++ L L Sbjct: 353 QFRYCIARERDLNFYLVVGTMGMLVAFLIGGFTENVWREIWKSNVLVFSLGLYLSRVKSK 412 Query: 416 N 416 N Sbjct: 413 N 413 >UniRef50_Q04RN1 O-antigen ligase/O-antigen polymerase n=2 Tax=Leptospira borgpetersenii serovar Hardjo-bovis RepID=Q04RN1_LEPBJ Length = 777 Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 52/425 (12%), Positives = 119/425 (28%), Gaps = 60/425 (14%) Query: 37 FVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDN 96 + S +T IL + K L F I L + + + Sbjct: 25 PQSVSVSQFFGGLTIATSFPLFILDQEAKKTWEKIQNPFLFFFGIYTLLFLSSLFYAENY 84 Query: 97 SPFRATYHSYLNTAKIFIFGSFI--VFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYIN 154 S F + ++ F + + ++ + L+ S+ L +++ Sbjct: 85 SSFFKKFLKQSEFGDFWMLLLFPASFLIASQEKNQTILKRFLFVSASIVILFGCISLFSE 144 Query: 155 SIHE-----------NDRISFGVGTATGAAYSTML----------------IGIVSGVAI 187 DR+ G + + + Sbjct: 145 VRIGKFVANGFKYAPGDRLQHFSGNIGPVKLYLPIGMMNTHLTFGGLLGLFLPGLFVDWF 204 Query: 188 LYTKKNHPFLFLL---NSCAVLYVLALTQTRATLLLFPIICVAALI---AYYNKS----- 236 KK +F+L A +L Q+R+ L ++ + L+ K+ Sbjct: 205 QSVKKKKGLIFVLKTFFVLAGFIILFFNQSRSIWLGIFVVLLLLLLKGTFSIRKNPISIS 264 Query: 237 -PKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIG 295 K + L +L++ ++ N + R + ++++ N R +Y+ Sbjct: 265 IKAKILAGFFFLGLLLSAGYLLKNSWLIQRSISQIFEVHNTEN--------QRYYIYKNT 316 Query: 296 LNIFIKSPFSFRSAESRAESM-----NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGL 350 + + K F + E ++ E H HN+++ G+ Sbjct: 317 IPLIRKHWFIGIGGGNYKEFHWKESSEMIEKEEQLWYELYITPRGHAHNDLLHFLVTGGV 376 Query: 351 MGIFSTLFLYFSLFYIAYKKRALGLLIL------TLGIVGIGLSDVIIWARSIPIIIISA 404 M + + LF ++ L + L + G + + + + Sbjct: 377 MAGILFILFWGKLFDFFFQNDFHSLTGIPILTIGILSLFPAGFFQCYLLDDEVVLPFFAF 436 Query: 405 IVLLL 409 + L Sbjct: 437 CGIFL 441 >UniRef50_A3JEK5 Putative O-antigen ligase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JEK5_9ALTE Length = 346 Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 120/339 (35%), Gaps = 11/339 (3%) Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 L F A + + + + + + + ++ + ++ F Sbjct: 8 FLFASWLFVFVTVVGYAVNDGSWSELRAVLVMAVYISFFWGVRFNDRVFELIALISAMGF 67 Query: 145 LIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF-LFLLNSC 203 + ++ Y++ RI + A + + + + + F + Sbjct: 68 ITLTFSQYLS---TGGRIGGFINPIPYATAVGSVAVLFLAMTLFSNRAFWQRGAFGVLFI 124 Query: 204 AVLYVLALTQTRATLL-LFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPI 262 ++ L +T+TR L+ +F + ++ K+ S+V++ A++ I N + Sbjct: 125 LLVVSLFMTKTRGVLVPVFLVTGGLLVVLLMMNKSKRLLQSLVIVFALVGFAAIAGNVFL 184 Query: 263 QNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE 322 ++R + N+ T N S+G RL ++ + ++ P +++ L Sbjct: 185 KDRLTQTYNEYGQMTEGNYDGSIGVRLQLWLTAGELIVQEPIIGHGKG-YRDALESLYLA 243 Query: 323 HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA-----LGLLI 377 + F+ H HN+ I+ KGL+G + L L + +AY+ L Sbjct: 244 ASMKESLYLFNANHFHNQYIDTTVKKGLVGGLALLLLLGAGVQMAYRSPRAPWQWYSGLA 303 Query: 378 LTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 + L G L+DV + + L+ ++ Sbjct: 304 VILVYGGSALTDVPLIHAHTIFLFFGICFLISAVSAETR 342 >UniRef50_Q97GP8 Membrane protein of EXOQ family, involved in exopolysaccharide production n=1 Tax=Clostridium acetobutylicum RepID=Q97GP8_CLOAB Length = 406 Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 56/418 (13%), Positives = 137/418 (32%), Gaps = 51/418 (12%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 ++ I Y+ + + + NIT LL +I L ++ Sbjct: 5 IKKINYLFICLFIFLNPLIPYNVKIHNNITVSDILLLVIFVLFLVEILRNRQKLKECFYI 64 Query: 81 IG-----LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 + ++ + + + + + + + F + + L+L+ + + + Sbjct: 65 MLGDKTLFCLILLFIVMMISVTYAKEKPLALEESLRFFCYIGLYIILSLSYREEKHFKGF 124 Query: 136 LYTLYSLSFLIAGYAMYINSIHEN--------------DRISFGVGTATG-AAYSTMLIG 180 + + + LI+ ++ R++ G AA+ + I Sbjct: 125 VTSFVASVTLISIIGIFQKITGMGIPHQYDYKVNGVTMVRVAAVFGNPNTLAAFMILSIF 184 Query: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 + A + + S ++Y ALT +R + + + + Y K Sbjct: 185 PIVMFAFFEKNLKKKAFYSILSVLIVYNAALTGSRNSYMGLALGFCVLALIYSIK----- 239 Query: 241 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI 300 ++L I+ +F + +R ++ AR+ +++ L + Sbjct: 240 ----LILPIIVLGGASMFLPQVTSRLRSI----------DNKNLNDARIKLWKTALKMIK 285 Query: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 P S + + + V ++ LR A ++S +HN ++ S G+ G + Sbjct: 286 DHPLSGVGNGNYIANYDAYVKQYPELRYA-DYSRFPVHNSYLKIESELGIFGGIFFVATI 344 Query: 361 FSLFYIAYKKRA-----------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVL 407 ++F Y LG + T + + SD +++ SI + + Sbjct: 345 VNVFLKLYNTYKKTDIKIKKAFYLGFIASTSAFLFMNFSDNLLFVPSITSFFWMFVAI 402 >UniRef50_UPI0001968C3F hypothetical protein BACCELL_00757 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001968C3F Length = 601 Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 50/422 (11%), Positives = 125/422 (29%), Gaps = 23/422 (5%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLIL 60 M F+ + I + + + I+F + S IY ++ + L+++L Sbjct: 1 MEKVFRQIKILSIGKMICSIGISLLLLGVINTTFISFSTHDLSFFIYPLSWAILCLTVVL 60 Query: 61 RGRQENYNIKNLILPLSIFLIGLLDL-IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFI 119 + K + L+ ++ L W + D + ++ + Sbjct: 61 SFLKFFIRRKKCFQFVVADLLVIILLGYWLLRYDFDLQLANWKLFLFGELCILWFSIRML 120 Query: 120 VFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLI 179 + L S K + ++ + I + S H I+ + ++ Sbjct: 121 LECNLISVEKISWVLLSSSIIQSVWGILQLYGFCESNHSKFDITGSFFNPGPYSGYIAIM 180 Query: 180 GIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKK 239 VS L TK ++ L +L +L +R+ + + V L N Sbjct: 181 VPVSLYLFLSTKCMKRYVALFFLAVLLCILPAGMSRSAWIGAIVSSVIVLFWQNNWIKYW 240 Query: 240 FTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIF 299 + + + + + S RL +++ + Sbjct: 241 YLKRKL-------------SVLCLVVGVVGIAVGSYLMFNLKKDSAYGRLFIWKNTVCAI 287 Query: 300 IKSPFSFRSAESRAESMNLLV------AEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGI 353 K P + + ++ + + + NE ++ G + + Sbjct: 288 WKKPVFGYGSCMFPVAYAQEQTDRFRSGKYTATEERVAGNPEYAFNEYLQILVEGGCLLL 347 Query: 354 FSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 F + + K+R GL + ++ S P + A++++ ++ Sbjct: 348 FGVVVIVAYALSGGIKRRDYGLCGGLISLLIFAFSSYPF---QYPAFCVVAVIIVASLST 404 Query: 414 RN 415 + Sbjct: 405 KR 406 >UniRef50_D2UC28 Probable lipid a core-o-antigen ligase protein n=1 Tax=Xanthomonas albilineans RepID=D2UC28_XANAL Length = 452 Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 46/408 (11%), Positives = 123/408 (30%), Gaps = 31/408 (7%) Query: 31 FSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYS 90 + +I + + + + L + L+ + L LL L ++ Sbjct: 26 WVLIFVALWPAPGLAASVLALGALVTLARLLHSRFRGGGAGLLSGPAWALTTLLFLAYWL 85 Query: 91 AFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYA 150 + + +A F F+ + + + L ++ + A Sbjct: 86 PQPLSALGAVDVPLALRESAVDLRFLPFLWLVAMAVATSRGRRLTFNGLGVIAAIWTLDA 145 Query: 151 MYINSIHENDRISF--------------------------GVGTATGAAYSTMLIGIVSG 184 + + GV + +L + Sbjct: 146 LVQALCGTSPLFWSMDQLKWAISHHGLCTLQQAMAADRLSGVFGPCNLKFGQVLASVSPF 205 Query: 185 VAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSI 244 + ++ + +LL + AV VL L +RA+ + + ++ V + + + Sbjct: 206 LLWGAARRGGAWGWLLAATAVGVVLVLAGSRASWITYALLLVLSGWGLLG---ARKLLVL 262 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF 304 + A++A ++ + + + +R+ + + A+ +L R ++ + + P Sbjct: 263 GVAAALVAGVLGLVSPQVHDRFERSARAFSG-QPADLNAALTGRAQIWAASWCMIRQHPL 321 Query: 305 SFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 E+ + H H ++E S G++G+ L + Sbjct: 322 DGVGVRGFREAYAACNPTPTQPGEWGSEPAFHAHQIVLEVLSETGVIGLLLWLA-GAAQA 380 Query: 365 YIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 + A++ ++ T + L V + + L L++ Sbjct: 381 WRAWRYASVAARERTRPAMQALLITVFPFNTHLAFYSSFWGSLALLLV 428 >UniRef50_A3EV53 Putative O-antigen polymerase n=2 Tax=Leptospirillum sp. Group II RepID=A3EV53_9BACT Length = 453 Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 58/368 (15%), Positives = 123/368 (33%), Gaps = 29/368 (7%) Query: 53 VCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKI 112 + ++ G ++ +L ++L + + R + + + Sbjct: 68 LSIVYFFGTGNLGSFWRFSLRTGWPLYLFTGVSFLSGLHSINRMEGLRGFWGDFEALMGV 127 Query: 113 FIFGSFIVF--LTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTAT 170 FG+ + + ++ +L TL IA + S + TA Sbjct: 128 LFFGASVALRKWSGIPRIWMTGALLLGTLAGAGVGIARIVIEHRSFLGMMNLGDKNSTAQ 187 Query: 171 GAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYV-LALTQTRATLLLFPIICVAAL 229 A ++I + + KKN LFLL+ VL + L LT++R L+ P+ + + Sbjct: 188 FLAILMVIILFLGIDGLQREKKNRFSLFLLSVLPVLAIFLFLTRSRTFLVAVPLAFLLMI 247 Query: 230 IAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARL 289 I I+ + A+ A V I ++ + + S S +R Sbjct: 248 ILAKAWRVLIVLGGILGIGALAAYFVPI-----------LRWEIATLPHPTSDGSFTSRY 296 Query: 290 AMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKG 349 +E + ++ PF ++ + + H HN G Sbjct: 297 PTWEGAIRMWKSHPFLGVGPDNFHMANIHALYHLPEYAS-------HGHNLFFNLLGEYG 349 Query: 350 LMGIFSTLFLYFSL---FYIAYKKRALG-----LLILTLGIVGIGLSDVIIWARSIPIII 401 +G+ + + + + LG L L ++ +G +W S +++ Sbjct: 350 SLGVAAFALWLAVWCRDVFAGLRTKRLGNSHAALCAGILVLLFVGGIAHPMWGGSTSLML 409 Query: 402 ISAIVLLL 409 + ++VL L Sbjct: 410 MLSMVLSL 417 >UniRef50_C3WA18 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WA18_FUSMR Length = 399 Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 56/400 (14%), Positives = 130/400 (32%), Gaps = 25/400 (6%) Query: 29 CFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIW 88 ++ + F+I ++ I + + + +E N L + + ++W Sbjct: 13 IVLYILGVSLFINFNITKISLGFIFVFILIDIFYFKEKMEFGNKKLRKLVLFFIGVGILW 72 Query: 89 YSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAG 148 + ++L + FI ++ L + +K + + L G Sbjct: 73 NFLADFNYR----AVRAFLKINQYFIITFYLYSLVKEKKEILRKFIISIGIGYLLLFFNG 128 Query: 149 YAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYV 208 Y + R +G + A S+++ G + K + + L++ Sbjct: 129 INTYF-LKKDISRFEGYLGIMSTALISSIITVFSFGGILESKSKKIKIFSIFLCASSLFL 187 Query: 209 LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNE 268 L ++QTRA LL + C ++ K ++ I+ + ++I F P NR+ + Sbjct: 188 LVISQTRAALLAVILSCFILVVI------NKNIKLLLSCISGMVLLLIFFQTPYSNRFKK 241 Query: 269 ALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHN---- 324 + + TS G R+ M++ + + + P + + + + V Sbjct: 242 ---NTFNIERTVQNTSNGLRVEMWKNAIWRYSQHPITGTGTKQDKKLFDKYVDMMPEDTK 298 Query: 325 ---RLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK----KRALGLLI 377 + E H+ + G+ IF L + K K L Sbjct: 299 VQRYYKSIFEKGFDDAHSMYLNNLVYHGVFSIFQFLIFLPYFLIVLIKNLEFKYRLATFG 358 Query: 378 LTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + G+ + + P+ + + + +N Sbjct: 359 ALISYCIYGVVWPLWRGGADPVFLWVILAITGCSCLKNKG 398 >UniRef50_UPI0001C16EA2 O-antigen polymerase n=2 Tax=Nostocaceae RepID=UPI0001C16EA2 Length = 473 Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 41/376 (10%), Positives = 110/376 (29%), Gaps = 50/376 (13%) Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 +S I L+ L+++ V ++ + + ++ + ++ + + Sbjct: 94 ISFTPIHLVVLLYWFIAVVSAGLSPVKKAAFSDLVNLTLYLLLFALCARSLRIHRVRSWL 153 Query: 136 LYTLYSLSFLIAGYAMYINSIH---------------ENDRISFGVGTATG-AAYSTMLI 179 + +S L++ Y + + R+ +G A Y + Sbjct: 154 ITLYLHVSLLVSVYGIRQWFFGAKALATWVDPESTLSKTTRVYSYLGNPNLLAGYLIPAV 213 Query: 180 GIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNK---- 235 + + L ++ A L LT +R + I +AA++ Sbjct: 214 ALSLVAIFAWHGWIRKSLAVIMLAANASCLVLTFSRGGWIGMLIAILAAMVLLAYWWSVQ 273 Query: 236 ----SPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 I+ + +IF +P++ R D +S R + Sbjct: 274 LPPFWRTWLLPIILGTFIGALLLAVIFVEPVRLRLVSIFAD-------RQDSSNNFRRNV 326 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 ++ + P + + + + R + + +E G + Sbjct: 327 WDAVFQMIRDRPIIGIGPGHNSFNKIYPLYQRPRYSALSAY------SIFLETAVESGFI 380 Query: 352 GIFSTLFLYFSLFYIAYKKRA-------------LGLLILTLGIVGIGLSDVIIWARSIP 398 G+ ++L + + +G + G++G G D + + + Sbjct: 381 GLSCFIWLIIVIVNTGLVQMRSFLKVRNQDGLWLIGAIAAIFGMLGHGTVDTVWYRPEVN 440 Query: 399 IIIISAIVLLLVINNR 414 + + ++ N Sbjct: 441 TLWWLMVAMVASYWNP 456 >UniRef50_Q7NEY3 IctB protein n=1 Tax=Gloeobacter violaceus RepID=Q7NEY3_GLOVI Length = 467 Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 45/407 (11%), Positives = 124/407 (30%), Gaps = 22/407 (5%) Query: 18 SMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLS 77 + + E + + ++I+ T ++ + ++ L + + + Sbjct: 53 ARVAEPVAMGVFCLLLLISPFVPTAAVGAVLAVGLALVVLLFCVRARPLSPLALPVSAFW 112 Query: 78 IFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLY 137 + L +D Y + + L + + L + +Y Sbjct: 113 LSGWVALIGSPRLLSSLDGWLKMTLYAAGFALGAHLLQKPLYRTLAVGTYLAATLPVSIY 172 Query: 138 TLYSLSFLIAGYAMY---INSIHENDRISFGVGTATG-AAYSTMLIGIVSGVAILYTKKN 193 L A + + + + R+ +G AAY I + A+++ Sbjct: 173 GLLQYVNGAPPLATWVDPESPLADTTRVYSFLGNPNLLAAYLIAAIPLGVVGALVWKNWA 232 Query: 194 HPFLFLLNSCAVLYVLALTQTRATLLLF-PIICVAALIAYYNKSPKKFTSSIVLLIAILA 252 + L + A L LT +R + + V A++ + + + + + ++ Sbjct: 233 AKAMAALAAGAGALCLVLTYSRGGWIALTATVLVLAVLLWPWLAERLKPEWRLWVPVVIL 292 Query: 253 SIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESR 312 V S + +S R+ ++ + P + + Sbjct: 293 GTVAAALVVAVVAVPAVGERALSIFDGRDDSSNNFRITVWGAVFEMIRAYPLTGIGPGN- 351 Query: 313 AESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK--- 369 L +F + ++ ++E G++G+ + L+L ++ + Sbjct: 352 -----LTFEAIYPFFQRPKFDALSAYSIVLELTVELGIVGLLAFLWLASAMLVQGFTVWV 406 Query: 370 --------KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 +G++ GL+D + + S+ ++ L+ Sbjct: 407 RRAEPVGALWCAAATCAVVGLLVNGLTDTVWFRPSVQVVWWMLCALI 453 >UniRef50_A9BFF9 O-antigen polymerase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BFF9_PETMO Length = 874 Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 60/448 (13%), Positives = 146/448 (32%), Gaps = 50/448 (11%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSI-------KIYNITAIVCLLSLILRGRQENYN 68 + + I I +L F++I + ++++ +V L+ + + + + Sbjct: 3 EKAKIPNDILILLVLFALIPFLMIPNLVYEYSTQKHLVFSLFMVVILIYYLFKYFSKPIS 62 Query: 69 IKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQL 128 IK + + + + + ++N + T + +F S+++ Sbjct: 63 IKFTYPHIFLSFFSISAFLSLISVYLENKYYLPTSVGVAFYIVLVMFFSYVITTRFGKDF 122 Query: 129 KSKKESVLYTLYSLSFL--------IAGYAMYINSIHENDR---ISFGVGTATGAAYSTM 177 K + + + + + + G+ ++ + + + +G + Sbjct: 123 KFIEYGLFVFMVTGTVIAIDGLLNKFLGFDLFFGKYGDPSQRIALRTTIGNPNFVSDYLA 182 Query: 178 LIGIVSGVAILYTKKN--HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNK 235 + +S L N L N + +V+ L QTR+ L + A+I+Y Sbjct: 183 QLLPISIYFTLRKNTNTYIRIYALANVFIMYWVVLLAQTRSIYLATFVGLGFAIISYLIS 242 Query: 236 SPKK----------FTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSL 285 + K+ F I+L++++LA + ++FN + + + SV+S Sbjct: 243 NKKETLKNYVKSKEFKIWIILVLSVLAFLFLMFNFETPFNRGGEVIAADRFAAMTSVSSW 302 Query: 286 GARLAMYEIGLNIFIK-----SPFSFRSAESRAESMNLLVAEHNRLRGALEF----SNVH 336 R + + F + +AE + Sbjct: 303 DERSLSWLSAVKQFADENHKNHFIIGSGINTYPVYAVHYLAEVQAENPERFLYAWNNFKR 362 Query: 337 LHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL-----------GLLILTLGIVGI 385 HN+ ++ G++G S + + SL + +K L L + I+ I Sbjct: 363 AHNDYLQVLGETGILGFSSIVLMLVSLMVVYFKVLKLEKDDDNKILLFPLFGWSATIMVI 422 Query: 386 GLSDVIIWARSIPIIIISAIVLLLVINN 413 + +I+ I+ V Sbjct: 423 HAFTEFAFHMHPNLILSVFILSSAVSEQ 450 >UniRef50_C7LVM7 O-antigen polymerase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVM7_DESBD Length = 512 Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 41/375 (10%), Positives = 104/375 (27%), Gaps = 50/375 (13%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 + +C + ++ + ++ + C L L+ + L + + Sbjct: 80 LFFICLGAWLLRHSIPASAKRLSGFAGMACALLLVPLAQTIPLPAALLEILSPVRAQWTQ 139 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 L+ + + +F+ ++ S+ +L+ L+ L+ Sbjct: 140 ALLQFGNTSNVTISYDLLTTWTQLVWWLFLVIFAVLLSQALSREAKLPTWLLHFLFVLAG 199 Query: 145 LIAGYAMYINSIHE----------------NDRISFGVGTATGAAYSTMLIGIVSGVAIL 188 L A Y + + + AA+ +L ++ ++ Sbjct: 200 LQAMYGIAQTLLPSLGVLWDTHAATGQAYKGYARGTFINRNHFAAFLGLLWPVLLAYLLV 259 Query: 189 YTKKNH-----------------PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIA 231 + V+ L +Q+R +L + + Sbjct: 260 LKSPRKMEQILGERQRAQLLVQKKAFGIFCLALVVLALFFSQSRGGILAAMLAFTLLSLF 319 Query: 232 YYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAM 291 + + I +L +I + + NR+ + + R+ M Sbjct: 320 AGLWRKRVAVALATCWIIMLGYGAVIGLEGLTNRFLQL------------DHGMAGRVEM 367 Query: 292 YEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLM 351 ++ G I P + + E+ + E H HN+ +E GL Sbjct: 368 WKDGWKILQDHPLTGTGLGTYPEASRAYQNAFS-----PERRADHAHNDYLETAVELGLP 422 Query: 352 GIFSTLFLYFSLFYI 366 + + L+ + Sbjct: 423 AACVLIGGIWGLWCL 437 >UniRef50_C3KDB6 Putative membrane protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3KDB6_PSEFS Length = 651 Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 115/371 (30%), Gaps = 45/371 (12%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQE--NYNIKNLILPLSIFLI 81 I +L S+ N Y + + LL L LR R+ I L Sbjct: 55 IGLLLLLSSLFFVTNRNVLHKFYYGLFSAPTLLLLCLRPREIKELLREPLAIAFLVFSAW 114 Query: 82 GLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYS 141 L L+W D F+ H++ +F + L ++L + Sbjct: 115 ALTSLLWSPEHHADTDLFKRPLHTF------MLFAGCGLLLHYRNELFKPVFFSAAVIAL 168 Query: 142 LSFLIAGYAMYINSIHE----NDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL 197 + + A + +++ + + T++ Sbjct: 169 VVCVCNLVAFSKGFEPGTGMRMIGGRGALDNPLLSSHVFGFFCVYWLYICMTTQRLQVLW 228 Query: 198 FLLNSCAVLYVLAL-TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 F + + A++ + L T +R L+ + + N ++ I ++ A +++ Sbjct: 229 FSIPALAIMTLTVLATGSRTPLVALTLTILWMTFVSRN---RRSALLIAGMVLGAAGLLL 285 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 + + I NR + R ++ + L + P+ S +S Sbjct: 286 FYPELITNRGSSF------------------RFELWGMSLQRIAEHPWIGHSYDS----- 322 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLL 376 L A + H+ + G++G +F+ Y K+RA L Sbjct: 323 ------ELYLTLADGYELREPHSFALGVLYYVGIIGFIPWIFMIGWGLYKGLKERAQPLF 376 Query: 377 ILTLGIVGIGL 387 IL ++ G+ Sbjct: 377 ILASSLLTYGI 387 >UniRef50_Q7NHG4 Glr2573 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NHG4_GLOVI Length = 781 Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 43/347 (12%), Positives = 96/347 (27%), Gaps = 23/347 (6%) Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 L+GL + + P R+ +++ + + F L + Sbjct: 76 LVGLTVAALVVSAALSPDPERSWWYATMAGGYFALLYGFSGRWPRGVPLLGIVALAQVLV 135 Query: 140 YSLSFLIAGYAMYINSIHENDRISFG-----VGTATGAAYSTMLIGIVSGVAILYTKKNH 194 + I F +G + L V+ L Sbjct: 136 SVAGLYQYALLVVIPEWQAGPPFHFFNNVYPLGHHNFGSGLLSLTLPVTLALALARPGKG 195 Query: 195 PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASI 254 +L+ L+ L +L TQ+R L CV + + + +LA Sbjct: 196 RWLWGLSGLLGLALLFSTQSRGGWLGALAGCVLVCGLLIRLDRRAWLALGAAGGVLLAVG 255 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 ++ + + S R ++ G+ +++ P Sbjct: 256 MLSL---------TFASTKSQLFLQGRDISAAQRWVFWQTGVRLWLDHPLFGVGQGVTGF 306 Query: 315 SMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK---- 370 +E + + + LH+ + + GL G+ + L + Sbjct: 307 LFPGYRSE---IDPWMARTAQQLHSTPVHLLAETGLAGLAAYLGWLGGCALAIGRLLSRE 363 Query: 371 --RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 A L G L+D + +I + ++ L+ +++ Sbjct: 364 RTAAAALAGALAGYAVSSLTDFQLENPAIALTLVLLAAELVRLSHPE 410 >UniRef50_C0WC10 O-antigen polymerase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WC10_9FIRM Length = 416 Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 50/423 (11%), Positives = 121/423 (28%), Gaps = 55/423 (13%) Query: 18 SMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLS 77 S L I Y L + + + +I ++ + ++ +++ G+ + Sbjct: 10 SWNLNQILYGLLVAYVFLLPIHLNLAIGLFLVMVVLNFANILKTGQFWPKVTVPKKISRP 69 Query: 78 IFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLY 137 ++ + LL + + +Y + + F+ + ++ Sbjct: 70 LWALFLLSAVSVCWSQEP------FLSAYNWIVVVGLKAGSFYFVLRYGSTGRRSLFLVK 123 Query: 138 TLYSLSFLIAGYAMYINSIHEND------------------RISFGVGTATGAAYSTMLI 179 + L+A Y +Y +S A++ M Sbjct: 124 VFMVSAGLVALYGIYQYFFGVIAIQDAEWIDHAAFPLMTKRAVSTLENPNILASFLVMTA 183 Query: 180 GIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKK 239 G+ + + L LT +R + + A+Y+K Sbjct: 184 AYSEGLFAPLKGGKRRASLAVIFLLAITCLILTFSRGNWIALFFVLFVFAGAFYHK---- 239 Query: 240 FTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIF 299 + + I ++ I + R + TS RL + ++ Sbjct: 240 ---AFLPFIGGGLGVLWIGWDRLSARIMSIFS--------IKDTSAELRLMYMDSATSMI 288 Query: 300 IKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFL 359 + P + N H HN + + G+ G+ L++ Sbjct: 289 EEHP-FGVGWYGYQFAFPDY----NFGYVDPSVIMYHSHNLLTNIAAELGIPGLALFLYI 343 Query: 360 YFSLFYIA-----------YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 + L +A + A G + +GI G++D ++ + I ++ Sbjct: 344 MYQLAVLARSIRHREAEPWIRGLACGYIASLVGIFVAGMTDYTLFNLQLGIYFWIFNAMI 403 Query: 409 LVI 411 + + Sbjct: 404 IAL 406 >UniRef50_C7PHL3 O-antigen polymerase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PHL3_CHIPD Length = 580 Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 96/306 (31%), Gaps = 35/306 (11%) Query: 114 IFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINS----IHENDRISFGVGT- 168 + +L L +LY + + + Y + H R++ Sbjct: 101 LIALTGFYLVLRRCKWRHFLFILYAIAVAGIIQSVYGLLQLYNILPAHSQFRLTGTFFNL 160 Query: 169 ATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA 228 AA+ + + + + K + LN + +L +TQ RA + ++ V Sbjct: 161 GAYAAFVALSACVSLVLIFYFKDKRMSMIPQLNIVLAIIILPITQNRAAWIALIVVGVFL 220 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGAR 288 + K I ++ I + S R Sbjct: 221 YARFMKKYLLYGMLIITGVLVIAGGYYL------------------------KKDSADGR 256 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEF-----SNVHLHNEIIE 343 + ++++ I P + + A A + + +G+ + + N++++ Sbjct: 257 VLIWKVTSQIVGAHPLTGIGYDRFAGEYMNYQASYMQAQGSPGEKQLADNVYYAFNDLLQ 316 Query: 344 AGSLKGLMGIFSTLFLYFSLFY-IAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIII 402 + G++G F L L F Y + + LG + IG+ + + + + Sbjct: 317 LTAESGVIGAFGILLLILVCFRVKGYDRFRYAGQAIILGYMLIGMFYYPHFILPLKMTGV 376 Query: 403 SAIVLL 408 + +L Sbjct: 377 LGLAML 382 >UniRef50_Q2BMR7 Probable transcriptional regulator SyrB n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMR7_9GAMM Length = 598 Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 56/422 (13%), Positives = 126/422 (29%), Gaps = 31/422 (7%) Query: 1 MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAF------VDNTFSIKIYNITAIVC 54 M + +L Y + + + + + I+ + + Sbjct: 1 MSFALQLKQDSSYKKPQKLFFALFGILFLIAPFYYQPNLGGEGLFIPHNSTIWIVATWII 60 Query: 55 LLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFI 114 + + R + L++ IG + + T Sbjct: 61 AAASFMIYRTNEIVLPRYWFGLALMPIGAWITGFVAVNNNPTEWLV---RLSAITGGYLF 117 Query: 115 FGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAM-------YINSIHENDRISFGVG 167 F S F Q+ + V+ + +F A+ +I + Sbjct: 118 FLSLFQFRLTKQQIVNALIIVVLMGFIAAFFGLAQALGWSKHFSFIPFSPSQTPVGIFQQ 177 Query: 168 TATGAAYSTMLIGIVSGVAILYTKKNHP----FLFLLNSCAVLYVLALTQTRATLLLFPI 223 ++ ++ ++ +A +T+ L ++ + Y ++L+ +R LL + Sbjct: 178 INIQTSFMVTMLVLILYIASSFTQSKISPAVTLLLIITAFFASYTVSLSGSRVGLLGIAL 237 Query: 224 ICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVT 283 LI+ + + K + I LL+ + + + + + N+ + + Sbjct: 238 SLPLMLISRWKELCTKKSILIGLLLTMCIGG-FLGKEGVISTSNKIERSITNIGGMEGD- 295 Query: 284 SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHN---RLRGALEFSNVHLHNE 340 R +Y IF +SP S + A+ H HNE Sbjct: 296 ---IRWKIYIQSWEIFKESPLIGHGLGSFQKVFQERRADIQTQGITSFGDAPRFSHPHNE 352 Query: 341 IIEAGSLKG---LMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSI 397 I G ++GI + +LFY ++ L L L + I ++ + + Sbjct: 353 FIFWLVEGGALSVIGILCAVAATLTLFYKLGWRKGLSLTALLIPITLHTQVELPFYISNT 412 Query: 398 PI 399 P Sbjct: 413 PW 414 >UniRef50_C6IP29 O-antigen polymerase n=3 Tax=Bacteroides RepID=C6IP29_9BACE Length = 537 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 102/348 (29%), Gaps = 25/348 (7%) Query: 69 IKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQL 128 + + FL+ L L + D+ F + I F SF +F + Sbjct: 2 KSIPVSSILYFLLSLGVLFVNANTFTDSQIFPKWMFMFTGLGVIGCFFSFYLF--RGKRF 59 Query: 129 KSKKESVLYTLYSLSFLIAGYAMYINSIHEN-----DRISFGVGTATGAAYSTMLIGIVS 183 + YT+ FL AGY + + + G A S + Sbjct: 60 ICNAKCCYYTVIISCFLQAGYGILQFFNILSSHSITYNVVGSFDNPAGFAGSLCAGLPFT 119 Query: 184 GVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSS 243 + Y+ K + ++ + L+++RA + + V I Sbjct: 120 FYFLQYSNKKVQWASWCALFVIVLGVLLSESRAGSISIFTVLVIYFIHQNKNKFHYKKHI 179 Query: 244 IVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSP 303 L+ + ++ IF ++ S RL ++ + P Sbjct: 180 GSFLLCLSFLLISIFV-------------ISVTVYHLKKDSADGRLLIWRCTWEMIKHEP 226 Query: 304 FSFRSAESRAESMNLLVAEHNRLRGALEF-----SNVHLHNEIIEAGSLKGLMGIFSTLF 358 F+ + A++ + +F + NE + G G++ + Sbjct: 227 FTGYGVGGFSAHYMDYQAQYFKEHPDSQFAILADNIKSPFNEYLSVGVQFGILTWVLLIA 286 Query: 359 LYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIV 406 L K + L ++ I + + + P I I + + Sbjct: 287 AGIFLILCHRKHPTKAGYVSLLSLLSIAVFSFFSYPFTYPFIWIISAL 334 >UniRef50_Q2JUE2 Putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family protein n=2 Tax=Synechococcus RepID=Q2JUE2_SYNJA Length = 471 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 49/417 (11%), Positives = 113/417 (27%), Gaps = 27/417 (6%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 KSS++++ +I ++ S I + + ++L E + LP Sbjct: 39 KSSLLVQTSDWIGLGLVLLYWVFSAQSSTGILGLILLAMAALVVLGWLVETPTWLPVHLP 98 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 L +F S YL + + S+ Sbjct: 99 LGLFWGIATLATILSPVPYAAREGWLKLTLYLAGYLLLQRLLRQLQFRDWIVGSLLLVSL 158 Query: 136 LYTL------YSLSFLIAGYAMYINSIHENDRISFGVGTAT-GAAYSTMLIGIVSGVAIL 188 + + + +A + + + R+ + Y +I + + Sbjct: 159 AMGVYGLRQYFYGAAELATWVDPESGLAGLTRVYSYLRNPNLYGGYLIPVIPLGLAATWI 218 Query: 189 YTKKNHPFLFLLNSCAVLYVLALTQTRATLLL-FPIICVAALIAYYNKSPKKFTSSIVLL 247 + L + L L LT +R + + + A++ S Sbjct: 219 WPSWGAKLLAGFTTAVNLICLLLTYSRGAWIGGLATLTLMAVLLAQWHSVDLPARWRRWA 278 Query: 248 IAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFR 307 + L + S TS R+ ++ L++ P Sbjct: 279 LPALLGGGGAALLLGILTVRSLRLRVQSLFWGRLDTSNNFRINVWAAVLDMIRDFPILGI 338 Query: 308 SAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA 367 + A + + + +S ++ G +G + + L+ Sbjct: 339 GPGNVAFNRVYPLYQRGNFSALGAYSVP------LQLTVETGFIGSLTFAWFLLVLWDHG 392 Query: 368 YKKRALGL-------------LILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 ++ L L G++ GL D I + + ++ A+ L+ Sbjct: 393 WRCWKTLLNLRDPQGLWVAAGLAACTGMMVHGLVDTIWYRPQVQMLWWLAVALITAS 449 >UniRef50_A5UVV0 O-antigen polymerase n=2 Tax=Roseiflexus RepID=A5UVV0_ROSS1 Length = 500 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 49/398 (12%), Positives = 126/398 (31%), Gaps = 42/398 (10%) Query: 52 IVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAK 111 +V +L+++L R+ ++ + L L+ + A ++TAK Sbjct: 97 MVAILTVVLLARRFLTERPRGLVSDPVIWWILAYLVAGAIGLWFARSTDAVMKQLIDTAK 156 Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEND----------- 160 I + I L T + L + + + Y + N Sbjct: 157 DCIIAALIFNLLATRIAFERAIWGLLIVGATLSALTVYQEITRTYDNNYWGFAQSAVRQI 216 Query: 161 --------RISFGVGTATGAAYSTMLIGIVSGVAILYTK-KNHPFLFLLNSCAVLYVLAL 211 R V +++ ++ AIL + + +L + L Sbjct: 217 STTMDDRARAFGTVNDPNYFGQLLLVLVPLAVWAILNGRTWRGKTSGIAALLLLLSAIGL 276 Query: 212 TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALN 271 T +R L I+ V + + +L++ ++ +++ + + R+ Sbjct: 277 TFSRGAYLGVVIVLVVYAMYLRLDAR------YLLVLPLIGALLYVAPPEFRARFGTLEE 330 Query: 272 DLNSYTN--ANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGA 329 + TN + S+ R EI L + + + + + GA Sbjct: 331 IVPGMTNAGVYNDGSIQGRSVKAEIALTMLADHLIFGVGRGNYRFHYRDYINQ---IEGA 387 Query: 330 LEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY-----------KKRALGLLIL 378 + HN +E + +G++G + L +++ ++ A + + Sbjct: 388 GSNTERDAHNLYLEVAAEQGVVGFAVFVGLILTVWSRLRVAEWLFAATGERRMADLAVAV 447 Query: 379 TLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 +G +G ++ + + + + + + ++ Sbjct: 448 KVGFLGYLVTSLFLHGAYGYMFWLQVGMAVALVVIAQR 485 >UniRef50_B4WNG9 O-Antigen Polymerase family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNG9_9SYNE Length = 845 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 121/390 (31%), Gaps = 27/390 (6%) Query: 46 IYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHS 105 I LLSL G ++ L + + ++ + F V N+ F A Sbjct: 53 ILIWQVAFLLLSLCTIGSLRKFSTPFFALGYGL-DWIVAAMLAVTLFSVANADFTAVAVW 111 Query: 106 YLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYI--------NSIH 157 +I +++ L S L + + G ++ ++ H Sbjct: 112 NFLLFGNYIVALYLLVHLLRSGLSRTFLWFSTVVSGTVTTVVGLWLWQPNPDMWLSDNFH 171 Query: 158 ENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRAT 217 R S +G +LI +S + K ++ +L S + L ++ +R Sbjct: 172 SALRNSSPLGHHNFVGGYNLLIFPISLSLCVTQKGWKRWVCILFSGVIGVGLYVSGSRGA 231 Query: 218 LLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYT 277 ++ ++ + + + +K S + + +L + + R +E S Sbjct: 232 MVGALMLLLLGMPFQLWQHRRKVQKSYL-VGGVLILLTALALAFSNPRMSELFEFSTSPE 290 Query: 278 NANS------VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALE 331 + RL M + NIF++ P + + +L G Sbjct: 291 VDETASVVVADGPTADRLFMLQAARNIFLEHPIVGVGPGNLSRVYSLYR---PIEAGGGM 347 Query: 332 FSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK--------KRALGLLILTLGIV 383 LHN + + G +G + L + + L + V Sbjct: 348 ALIQQLHNTPAQILAELGALGFGVYIGWLVWLIRMTGRIYSKVTDSTDRYLLYGIAASFV 407 Query: 384 GIGLSDVIIWARSIPIIIISAIVLLLVINN 413 G G S + + I S ++L ++ Sbjct: 408 GYGFSSLTDYQLENIGISSSLLILTALLVR 437 >UniRef50_B8CZB5 O-antigen polymerase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZB5_HALOH Length = 393 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 50/415 (12%), Positives = 127/415 (30%), Gaps = 43/415 (10%) Query: 15 LKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLIL 74 +K++ IL+ ++ + I + + + ++ + +I+ +E Sbjct: 1 MKTTSILDKSIHVCLYIFAIGTMISKAITSFAGGLVVLLWVSKMIIIRDKELKPDPLKWP 60 Query: 75 PLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKES 134 +F+ + + + F + T + Sbjct: 61 MAGLFIAVAFS-----------GLDVMDNTTLTEIGTVGLLILFYYAVVNTVNDLKLVRN 109 Query: 135 VLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNH 194 + + + Y +Y + R+ + + M + Sbjct: 110 LSLVSLISLIVASIYGIYQHYYLNYPRVQGFMFSLAFGNVLAMFSIFTLIYLLWGNLNKK 169 Query: 195 PFLFLLN-SCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 ++L+ + L L T++R L F + K I++++ +L + Sbjct: 170 KKIYLIFPTILFLVNLLFTKSRGAWLAFLGGTGFLGLIRDRK-------IILIMLVVLIA 222 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 + NR+ + + S RLA+++ L ++ + + Sbjct: 223 SFYLLPDSYINRFMSIF-------DLRNNRSNLGRLALWKGSLLMYRDHFINGVGFGKFS 275 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA------ 367 N R + H HN I++ + G +G+ + ++L +S+ + Sbjct: 276 IEYE------NHYRQPHTATTCHAHNNILQFMAETGSIGLIAFVWLMYSIIKLLYKRYLT 329 Query: 368 -----YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 +K LG L+ + GL++ + + + L +VI N Sbjct: 330 IESLNWKLYLLGSLLAVIMFNIQGLTEYNFGDAELNRLFWFLLALNVVIINYFKN 384 >UniRef50_Q7V4W6 Possible bicarbonate transporter, ICT family n=16 Tax=cellular organisms RepID=Q7V4W6_PROMM Length = 439 Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 45/394 (11%), Positives = 107/394 (27%), Gaps = 30/394 (7%) Query: 48 NITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYL 107 I+ +L + + + + + + + V + + Sbjct: 51 LGLTILAAGALWIIWGCVTPAGRIGSISSCLLVFFAIACLATGFSPVPLAAAKGLIKLIS 110 Query: 108 NTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIH---------E 158 + + + + S+ + YA H Sbjct: 111 YLGVYALMRQLLATSSDWWDRLVAALLTGELISSVIAIRQLYAPAEEMAHWADPNSVAAG 170 Query: 159 NDRISFGVGTATGAAYSTMLIGIVSGVAIL-YTKKNHPFLFLLNSCAVLYVLALTQTRAT 217 RI +G A M I ++ VA+L + ++ + + +R Sbjct: 171 TVRIYGPLGNPNLLAGYLMPILPLALVALLRWQGLGAKLYAMVALGLGITATLFSFSRGG 230 Query: 218 LLLFPIICVAALIAYYNKSPKKFTSS---IVLLIAILASIVIIFNKPIQNRYNEALNDLN 274 L L+ +S + ++ LI I+ ++ Q + Sbjct: 231 WLGMLSALAVILVLLLLRSTSHWPLVWRRLLPLIVIVLGTAMLVIAATQ--IEPIRTRIT 288 Query: 275 SYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSN 334 S S +S R+ ++ L + P+ + A + + + + +S Sbjct: 289 SLIAGRSDSSNNFRINVWLSSLEMIQARPWLGIGPGNAAFNRIYPLFQQPKFNALSAYSV 348 Query: 335 VHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA---------LGLLILTLGIVGI 385 +E GL G+ ++L L + L L G+ Sbjct: 349 P------LEILVETGLAGLMASLALVITGMRKGLAGLNSNHPLALPALASLAAIAGLAVH 402 Query: 386 GLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 G++D I + + ++ + L + Sbjct: 403 GITDTIFFRPEVQLVGWFCLATLAQTQPEQKQLQ 436 >UniRef50_A1TYQ8 O-antigen polymerase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TYQ8_MARAV Length = 415 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 61/416 (14%), Positives = 150/416 (36%), Gaps = 27/416 (6%) Query: 12 PYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILR---GRQENYN 68 P + L+ + I+ ++ + + + ++ + +V ++S + + + Sbjct: 3 PVQSGLASTLKYLLLIVIGTFPALSVIVDGYGSALWYLLGLVGIVSFAISANVRERLCFE 62 Query: 69 IKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQL 128 K L+ + FL + +I Y + + + + I + L Sbjct: 63 PKALLFVATPFLFFVWSIIIYWLVDPSD-------FAKSRVERHALLLISIPVIALLFHA 115 Query: 129 KSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAIL 188 + + + +L + + GY + +H+ + G+ A ++ I+ +L Sbjct: 116 RFRSKDLLLSFSLSGLVFLGYWI----VHDGEGRLDGLVHAIHFGNIALITLILCVGGLL 171 Query: 189 YTKKN-HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA-LIAYYNKSPKKFTSSIVL 246 K + S L + +R L+ + +A ++ ++ + Sbjct: 172 TQSKRHWYVIAAAGSVGALIAFMESGSRGGLVALFLALLAVGFWFSVTRNQIRYFVITLA 231 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 L+A A + + + PI RY L++L+ ++ TS+G RL M++ LN+ ++P Sbjct: 232 LVASAAIVSVKYVDPISERYELTLSELDKFSEGQLYTSMGMRLLMWDAALNVITEAPVIG 291 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 + ++E + +FS+ HN+ + + GL+G+F L + + Sbjct: 292 SGFSGYRTEILTRISEGHLKPLMSDFSSE-PHNQYLYQLASHGLIGLFLLLLMLTLPLFY 350 Query: 367 AYKKR----------ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 R + L ++ L + GL+ + R + + Sbjct: 351 LATPRPGSHRNHHILRVTLAVIFLSFIFFGLTITLFDQRRVIQNYGLYYAIAAWFI 406 >UniRef50_D1C2X7 O-antigen polymerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2X7_SPHTD Length = 465 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 41/347 (11%), Positives = 94/347 (27%), Gaps = 25/347 (7%) Query: 74 LPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE 133 + +++ ++G L L + R L + + L + Sbjct: 132 VAIALLVVGTLSLFTVADPSHRAESLREYRWVILEPVVFAFLLRWYLTDRSDRWLTAWLY 191 Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193 + L ++ ++AG ++ RIS + + + + Sbjct: 192 AGAAALAAMYAVVAGLGGSGLAVEGVVRISGTYPHPNALGLYLERVVPFAVALGIAFRSR 251 Query: 194 HPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILAS 253 L + L LT +R L + + +++ Sbjct: 252 LDLRGLALAALCAAGLLLTFSRGAYLGAGAGLLVVAWLAGRRRMAGALVLGAVVLGGALV 311 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA 313 +V R + S RLA+++ L + P + + Sbjct: 312 LVA------GERLLSLFS----------GGSGSLRLAIWQSSLAMIRDHPITGVGLDQF- 354 Query: 314 ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK---- 369 + + E H HN +++ G+MG+ L ++ Sbjct: 355 --LYQYAPRYVSPEAWPERFTSHPHNIVLDLWLRLGIMGLGVAAAYAVVLVRRVHRIVGQ 412 Query: 370 --KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 + LG L + GL D + + + ++ + R Sbjct: 413 QSRLGLGALGALVAGATHGLVDNGYFLPGLALAFWLVTAIIDLEVGR 459 >UniRef50_D1BNH3 O-antigen polymerase n=3 Tax=Veillonella RepID=D1BNH3_VEIPT Length = 412 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 50/413 (12%), Positives = 120/413 (29%), Gaps = 49/413 (11%) Query: 29 CFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIW 88 F + ++ + + V L I + + K+L LP ++ + Sbjct: 12 LTFYIERLIYGVVIAMPLQPMVGDVLLWLAIGLALYDLISSKSLSLPTGYLSWTVMIFVI 71 Query: 89 YSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAG 148 ++ SP + +I G + + + L + L+ Sbjct: 72 WTGISSLMSPNWD-WSIQSWFYQIVAGGGMYYLVRTYIRTPKQWNYFLRAFLGTAVLVCI 130 Query: 149 YAMYINSIH----------------ENDRISFGVGTATGAAYSTMLIGIVSGVAIL---- 188 Y R++ + +++ V IL Sbjct: 131 IGAYQYIFVPNIHIKEWVDAAQFPKLMRRMASTLQNPNLLGAYLLMVLSVCISYILVYMK 190 Query: 189 YTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLI 248 + L+ + + LT +R + F + + I + + L + Sbjct: 191 ENRTREVVTMLIIGVVLFLTMLLTYSRGIWISFAAMILYWAIFVERR--------LFLSL 242 Query: 249 AILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRS 308 ++ I+ + + +R TS R A+++ + I ++P Sbjct: 243 LVVPLILYFYEGEVASRLWSIFQ--------GHDTSSDLRWALWDSTMYIVRENPIFGIG 294 Query: 309 AESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY 368 + N H HN + + G+ G+ S L + + Sbjct: 295 WNTFYLVYPEY----NYYIQGPNVLMYHAHNLYLNILAETGIPGLLSFLAVIVGHVVTSV 350 Query: 369 KKR--------ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 + + +G+ L +G++ GLSD +++ + I+ + + Sbjct: 351 RLKGDMFRQAAQIGIGALAIGVLFSGLSDFELYSHQVTIVFWQLLGWVGAFVK 403 >UniRef50_Q7MY35 O-antigen ligase RfaL n=3 Tax=Enterobacteriaceae RepID=Q7MY35_PHOLL Length = 408 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 47/346 (13%), Positives = 115/346 (33%), Gaps = 13/346 (3%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGL 83 ++ I + +++ + + + I L L+ RQ ++++N + LSI L + Sbjct: 18 LSIIGIYIALVYLPDITRYKNLVIVLIGITALTYLVTDFRQVMHSMRNSL-FLSIMLFIV 76 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 + F+ LN +F F +V + +K + + L+ Sbjct: 77 AMFYSVAISVDPALSFQEMNKPILNGLLLFSFTFPVVLYKENKESIAKMILYSFAIGMLA 136 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC 203 + YI + ++ + + I+ L+ K +L + Sbjct: 137 ICLTDVGKYIINYNKGEMPFTNFNHREFSYGFIFYFPILLCTWALWKKHTLVSWLILAAA 196 Query: 204 --AVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP 261 L++L T R + +I +I I+ +L+ II N+ Sbjct: 197 SAISLFLLLGTLARGAWVAIAVITAFIIIINREWKLTIIVGLILSFSVVLSHTTIIANEN 256 Query: 262 IQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 + + + + +S + + +++P + + Sbjct: 257 TKLLF---------WKLTQTDSSHRYKNGTQGTAFELILENPIKGYGYGN-KVYHKVYNE 306 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA 367 + +++ HN ++ G++G+ +TL + FS Y + Sbjct: 307 RVADYPDWIYRTSIGPHNILLALWFAGGIIGLITTLLMTFSALYTS 352 >UniRef50_C6M4U2 O-antigen polymerase n=5 Tax=Neisseria RepID=C6M4U2_NEISI Length = 610 Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 41/409 (10%), Positives = 116/409 (28%), Gaps = 14/409 (3%) Query: 23 IITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIG 82 +I + V S + + + L+ +++ + +++ + + ++ Sbjct: 23 CFLWICAAPFLSFYRVGPLSSFYLEAASLLGALMLVLVTAYKGLLSVRLPKAAVGLLVLA 82 Query: 83 LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSL 142 + + + ++ + + +L Sbjct: 83 AFWWLQARMMDLIYVGMNDMVMWTFIILALAVWACRGWVAAYGQERIVTVFAWSLLFGTL 142 Query: 143 SFLIAGYAMYINSI----------HENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKK 192 + + + +S +G + M G+++ + T+K Sbjct: 143 LQAAIAFIQFKGWYDLGFLRSMIVYSGKEVSGQLGQRNHLGHYLMW-GVLAAAYLWSTRK 201 Query: 193 NHPFLFLLNSCAVLYVLALTQTRATL-LLFPIICVAALIAYYNKSPKKFTSSIVLLIAIL 251 +L + + VL L +R L + + + L + I L L Sbjct: 202 MPGWLGFVLVFLMTAVLGLVNSRTILGYVAGVALILPLWRWRAGRDSARLVRIFFLTVAL 261 Query: 252 ASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAES 311 ++ I + NS R + F+ +P+ S Sbjct: 262 VAVFQFAMGSILELLGNGQYETAVERAGNSGFEGSMRQIEWRKAWTAFLSAPWFGHGWNS 321 Query: 312 R-AESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMG-IFSTLFLYFSLFYIAYK 369 ++ + + L H HN +++ S GL+G + L + L+ + + Sbjct: 322 FAQQTFWINAEQQYFPNNILGVLFTHSHNIVLQLLSEVGLVGTVLVALTMLAGLWRMLVR 381 Query: 370 KRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTI 418 L+L + ++ + + +++ + R + Sbjct: 382 PYHPASLLLLSMVAVSMCHSMLEYPLWYIYFLTPFVLMFALAPARYEDV 430 >UniRef50_A6QBN3 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QBN3_SULNB Length = 410 Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 56/398 (14%), Positives = 128/398 (32%), Gaps = 13/398 (3%) Query: 26 YILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLD 85 Y+L F+ + T S+ + + +V L + + I L+ +L Sbjct: 16 YLLLAFAFTLPLSRATNSLSVALLILLVFLQGHYKQQIARLKHSHFAIAILAFISFTVLS 75 Query: 86 LIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFL 145 L+W K L I IF + + + + Sbjct: 76 LLWTHNMK------IGLNGKILYLYWIAIFAIALNVKKDNIPSVITAFVLGMVVSEVLSY 129 Query: 146 IAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAV 205 + ++ H + S + + + I+ + + LL Sbjct: 130 GMFFELWTIKGHGKEYPSPFMMHIDYSIFLAFTAIILLNRILSKRYTPKEKIALLFFFIT 189 Query: 206 LYV-LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQN 264 + L + + R L F + A + +Y + + +++VL++ I + + Q Sbjct: 190 ITGNLFINEGRTGQLAFLVGIFATVFIHYRINFRSIIAALVLIVVIF-TGAYTLSDKFQT 248 Query: 265 RYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHN 324 R A +D+ +S G R+AMY + +I P ++ + ++N Sbjct: 249 RVQAAQHDITKIEKGQFTSSWGMRVAMYIVAADIIKDHPLIGVGVGDFRDAATEALKKNN 308 Query: 325 RLRGALEFSN---VHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL--GLLILT 379 H H++ + G +G F L +++ ++ L L++ Sbjct: 309 HNFNKKVVQFIPKYHFHSQYLNVLVQNGFIGFFLLLMVFYQFTRLSISDPELKELSLLIV 368 Query: 380 LGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + + + + ++ + + I L L + T Sbjct: 369 IMFLIGFIPEPLLMKQFTNTLFILFAGLFLGASLPQRT 406 >UniRef50_A8PNA9 O-Antigen Polymerase family n=1 Tax=Rickettsiella grylli RepID=A8PNA9_9COXI Length = 405 Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 48/312 (15%), Positives = 100/312 (32%), Gaps = 15/312 (4%) Query: 102 TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLY--TLYSLSFLIAGYAMYINSIHEN 159 +H+ + +K + + + + L+ TL +I + + Sbjct: 91 AFHTLIKYSKFLLGFFLLSVFRDKKTARYAFFAFLFSATLTLFISVIKFFGSWDFLHRFP 150 Query: 160 DRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLL 219 M + +A LL+ AV VL + +R+ L Sbjct: 151 ADSGVFKDHIFTGFLLAMTGYCYAVLAFSIKNAGRWLFGLLSLVAVYDVLFINLSRSGYL 210 Query: 220 LFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNA 279 + + + ++ K S V + L + ++ +NR+ A + + Y + Sbjct: 211 VLFSLILLLAWQQFSW---KGLSMSVFISTFLIAGLLFLPANFKNRFALAQSQMTQYRHG 267 Query: 280 NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHN 339 + TS+G RL Y+ L + K P+ S A ++ + + + HN Sbjct: 268 SCDTSIGLRLEFYQNSLKLIKKHPWIGTGTGSFA-------KDYLSITSEKHVATQNPHN 320 Query: 340 EIIEAGSLKGLMGIFSTLFLYFSLFYIAYK---KRALGLLILTLGIVGIGLSDVIIWARS 396 E GL+G L L+ +++ R + L I L + + + Sbjct: 321 EYFNIIVQFGLLGFIVLLALFVVHGITSFRLTGNRQYFAQAVLLSIAVGSLFNSWLMDVT 380 Query: 397 IPIIIISAIVLL 408 + L Sbjct: 381 QGCFYVIFTALC 392 >UniRef50_D1Y330 O-Antigen Polymerase family protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y330_9BACT Length = 421 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 44/409 (10%), Positives = 113/409 (27%), Gaps = 17/409 (4%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 + +E + L S+ ++ + ++ + I+ + I + Sbjct: 6 SKADTIENVLVNLYLASVCLSPLGPVVHYVLWALCLILMTVGRIKYHVPFRLKNLDRTGK 65 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESV 135 + + L L + + + ++F+ F + K + Sbjct: 66 IVLGCWLALCLWSAAVGLLTFHDVDGYGRNVTIFWEVFLGMYFAARFLTRETSRRKMMRL 125 Query: 136 LYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 L + +R + + Sbjct: 126 FVWASVLILFGNLLRELGFIGYFPNRSLENGNNLGLLGLLLLPPLVCYAFWCAEGLVRR- 184 Query: 196 FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIV 255 +L V+ L+ + + I L + + ++ + V Sbjct: 185 ---VLIVVPACLVVFLSFSSGAWMAAAIGGCFLLYWASRFKKIGISFLASGAVVLVLACV 241 Query: 256 IIFNKPIQNRYNEALNDLNSYTNA-NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 I + + + + + T+ + R ++ + K P + E Sbjct: 242 AINARSGGSLWRKIATEYRQVTSMRDMGAFTTYRNEIWNASAYLIRKRPITGWGGEKFLR 301 Query: 315 SMNLLVAEHNRLRGA-LEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRA- 372 + L G + + +H H+ + L G+ G+ L Y A++ Sbjct: 302 LYHELFRTKADELGLKYQANGMHPHSTFLNVAYLAGIPGLVLFLAAYAVSLKKAFRLART 361 Query: 373 ---------LGLLILTLGIVGIGLS-DVIIWARSIPIIIISAIVLLLVI 411 + L IL L ++ L+ DV++ R ++ +LL++ Sbjct: 362 ENGRSFPWGVALFILLLTVLAYALTADVLMGRRDTSVMFWCFWGILLIL 410 >UniRef50_B4B3W0 O-antigen polymerase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B3W0_9CHRO Length = 851 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 68/444 (15%), Positives = 137/444 (30%), Gaps = 44/444 (9%) Query: 4 SFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDN------TFSIKIYNITAIVCLLS 57 + +P T ++ ++ +I + FF++I F + + + LL+ Sbjct: 1 MYSTSKSEPNTSETRLLKGVIFALYVFFTLIPDSNTLMVQWPWVFFWQTGLLCLVFWLLA 60 Query: 58 LILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGS 117 ++ R+ L + + LIGL +I + N + + A ++ Sbjct: 61 ILWSQRKIQALGNGLDWVVGLTLIGL--IISTLFAQFPNQARWYAWAALCMLAALYCLNH 118 Query: 118 FIVFLTLTSQLKSKKESVLYTLYSLSFLIA------------------GYAMYINSIHEN 159 ++ QL K+ + +S + G + + Sbjct: 119 WLCTPKRRYQLLVKQGYLNIAFIIVSLTLWTTQTLLPQLARLNTFKQYGVNLSFDFSVLE 178 Query: 160 DRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLL 219 R +G A +L + + +L+ L L T ++ L Sbjct: 179 LRNWAPLGHQNYVAGYLLLAIPLLVSLSILETSKKRWLWFSGVGLGLLDLYTTSSKGGWL 238 Query: 220 LFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNA 279 + V A++ KS + I+++ N L + + Sbjct: 239 GLAALFVFAVVVLLLKSNLPRLWLGIGSFIAFIIILLLALTN-----NRLLLLIKQVISG 293 Query: 280 NSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHN 339 + L RL ++G + I+ PFS + L + LH+ Sbjct: 294 QTGGELAYRLINTDLGWRMGIEHPFSGIGLGNVPLLYQKYRPIWAGRESELAYQ---LHS 350 Query: 340 EIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL----------GLLILTLGIVGIGLSD 389 ++ + G+ GIF L L Y ++ GL LG + L+D Sbjct: 351 TPVQLWAELGIWGIFPLLEAVILLTYALFRYATPLEKTDQIFIWGLSGALLGYGMMSLTD 410 Query: 390 VIIWARSIPIIIISAIVLLLVINN 413 + SI ++ I L I Sbjct: 411 YQLDNISISATLVIYIACLASIYR 434 >UniRef50_Q6FFS6 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FFS6_ACIAD Length = 568 Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 35/392 (8%), Positives = 127/392 (32%), Gaps = 17/392 (4%) Query: 33 MIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAF 92 + +A++ S + + + L N + + + + ++ + Sbjct: 32 ISLAWLSPDHSYPWLTFASEMLSFAAFLSLLALFLNRPLELPRVQLLALPVVFIPMIQWG 91 Query: 93 KVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIA---GY 149 F + S ++ L+ +S + + ++ L L+ Sbjct: 92 FGLVVDFSSALLSSAYLLGFWLTMLLGYNLSRSSADRERMFTLSSYLLFAVALLTSLIAC 151 Query: 150 AMYINSIHENDRISFGVGTATGAAYS-------TMLIGIVSGVAILYTKKNHPFLFLLNS 202 ++N + A ++ +++G++ + + +K + + Sbjct: 152 IQWLNLESHVPGVMNLYSHRPYANFAQPNNMSTFLILGLLGCLYLAEKQKLKQYYIWPVA 211 Query: 203 CAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPI 262 +++ + L+Q+R + + + +++L ++ ++F + Sbjct: 212 ALIVFAITLSQSRTAWVFGLFFIIYWTYKSWRYPTHLKRYAVLLWAIGFFAVGLLFPRFT 271 Query: 263 QNRYNEALNDLNSYTNANSVTSLGA-RLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVA 321 + ++ ++ S G RL +++ L+ + P++ + Sbjct: 272 RLIQKLKEGNVVQTSSVVERASAGHERLGIWQQMLDAIHQKPWTGYGWNQ-----TSIAE 326 Query: 322 EHNRLRGALEFSNVHLHNEIIEAGSLKG-LMGIFSTLFLYFSLFYIAYKKRALGLLILTL 380 + + HN +++ G L+G T+ + + ++ + +I L Sbjct: 327 LSSMSSNTIHVWFTSAHNVVLDLLVWNGWLLGGLITICILIWICWLNVHAKTTESIIACL 386 Query: 381 GIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 + + + ++ + ++ L+ +I Sbjct: 387 MVSAVWIHTLLEYPLQYAYFLLPVGFLMGLIQ 418 >UniRef50_C0N914 O-Antigen Polymerase family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N914_9GAMM Length = 571 Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 57/425 (13%), Positives = 126/425 (29%), Gaps = 28/425 (6%) Query: 4 SFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGR 63 + H + ++ +I ++L I ++ ++ + Sbjct: 1 MTQTHKSFFSRWSVAEVMLVILFLLAPLYYHPNLGGEGLRIPNNITVWLIAIIFITFSIN 60 Query: 64 QENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLT 123 + + +L L+ S F + I +F+ L Sbjct: 61 KVIKAEFFQLPRYFGYLTAFPILVILSGFLAG---VEQPLNWLFRVLFILGGFAFLFSLF 117 Query: 124 LTSQLKSKKESVLYTLYSLSFLIAGYAMYINSI-----------HENDRISFGVGTATGA 172 + + +L + F+ AG + + + A Sbjct: 118 QHKLKAGRWDRLLLIIALSGFIHAGIGLLQIWLKLDMPFLLPKSPQGIPSGLFQQINNQA 177 Query: 173 AYSTMLIGIVSGVA----ILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA 228 +Y I + +A + + N L L+ V+ L+ +R L I Sbjct: 178 SYLATCIILSFYLASRPLVFKRRFNVQALLLVTVLVSSIVVGLSGSRTGWLALAIALPVI 237 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGAR 288 L+A + + S+VLL A+++ V ++ + + Y S AR Sbjct: 238 LLARREQLWSNKSLSVVLLAALVSGFVFGTMNNGGKTIDKTVAIQSGY-------SGSAR 290 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGA---LEFSNVHLHNEIIEAG 345 L +Y I L++ + P+ S + + H HNE+++ Sbjct: 291 LGIYTISLDLLAQKPWFGHGVGSFPRQFQYARPDFYIEYPEGKLPKQMINHPHNELLQWM 350 Query: 346 SLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAI 405 G+ + + +L + YK ++ I L + + + Sbjct: 351 VEGGVSALLGIVISVTALAFALYKVGPARGFSYLALLIPISLHTQLELPFYMSALHWLVF 410 Query: 406 VLLLV 410 +LL+ Sbjct: 411 MLLVA 415 >UniRef50_A9DSN2 Putative uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DSN2_9FLAO Length = 410 Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 39/399 (9%), Positives = 121/399 (30%), Gaps = 15/399 (3%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 +IL + +D I I+++ + + + L ++++ + ++ Sbjct: 19 VFILLLGVVATFTLDKINPIFIFSLMIVQGFVLFRPDEKVNFKTNTYFWLLMALYGLNIV 78 Query: 85 DLIWYSAFKVDNSPFRA--------TYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVL 136 +++ + + ++S I + F V L + ++ Sbjct: 79 GMLYTDNYSKGFNTITRQISFVLFPLFYSVYRVKNIGLLLKFYVIAVFGFILAFELHTLY 138 Query: 137 YTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF 196 Y ++ + + ++ ++ V + L K + Sbjct: 139 RFFYKSDIFPLDLELFFSYRYTGAELTKLFEMHNAYFGMYIMFSHVIILDYLSRTKKYYA 198 Query: 197 LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 + LL L L Q A + + Y +K + + + +L + Sbjct: 199 IILLLLLIAFQSLFLLQMVAKTAIILNALLILCSLAYILIKRKLFAILAFSVVLLVASGW 258 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 ++ + + + + + + R M+ + + ++ +++ Sbjct: 259 FASQHLNLSVSRITDRMMELQKGDG-SQEETRARMWSAAIPVIKENYLIGTGTGDVKKAL 317 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLL 376 + + N ++HN+ ++ G++G+ L ++ A K Sbjct: 318 HAEFGKQNIS------IRSNVHNQYLDYLMRFGIIGLGLFLAVFAYSLIHAIKTNNYIYF 371 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 T+ I+ ++ I+ + + LL + Sbjct: 372 CFTIIIMVCCFTENILSRQWGITFFATFNYLLYYQYQKK 410 >UniRef50_C5CXB6 O-antigen polymerase n=1 Tax=Variovorax paradoxus S110 RepID=C5CXB6_VARPS Length = 419 Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 45/360 (12%), Positives = 111/360 (30%), Gaps = 18/360 (5%) Query: 65 ENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTL 124 ++ + L + S +H I + + + Sbjct: 48 RLRANPLWWPLVAYLAWTFIVLAIGPHYPETGS---NLFHGLRIGLTILMAMALTREEAV 104 Query: 125 TSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSG 184 + + L L +++ G+ ++ + + V G Sbjct: 105 WALRGFLLIAALNILLVVAYYAIGFPIWSPLRAVVMEVGNKSISNALLFSVVASTAAVWG 164 Query: 185 VAILYTKKNHPFL--FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTS 242 +A + + + F+L L V +R ++L ++ I + S K Sbjct: 165 IAQIAAHRPLRAIPAFVLMLGLGLVVALPLTSRTSVLALLLVIPVVCIHQWR-SHLKMLV 223 Query: 243 SIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNAN-SVTSLGARLAMYEIGLNIFIK 301 S ++L A++ + + +Q++ + ++ S R MY + Sbjct: 224 SALVLGAVVLAAALYQLPQLQHKVETGVEEIEKAQAGEIFKGSWVIRYYMYRDTGLMIAD 283 Query: 302 SPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF 361 P + + ++ AL + HN+ + G+ GL + S L + Sbjct: 284 RPLTGWGIGGW-------TDQWHKRGPALFADSNMPHNDFLWVGAQGGLPALLSLLAIMA 336 Query: 362 SLFYIAYKKR----ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 + A+K+ L + ++ ++ + A+ ++ A+V L + T Sbjct: 337 GAVWQAWKRPDIAGRYALAATLIALIASSVNSAVRDAQIGLALLWIAMVYLRLAQEPRET 396 >UniRef50_C7HY66 O-antigen polymerase n=1 Tax=Thiomonas intermedia K12 RepID=C7HY66_THIIN Length = 419 Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 53/394 (13%), Positives = 133/394 (33%), Gaps = 21/394 (5%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 T I F+++ A + + + L++ L+ ++N ++ L+ +GLL Sbjct: 16 TSIFTTFAIVFAAASTPLPTAWGSASLVFLLIAFFLQSLKKNTWLRIRRNSLAWAAMGLL 75 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 + + + + I+ LT +LK + T LS Sbjct: 76 TALAIGMLYGATPL--SQAFEFWTKYLKLLAIPIIIGLTPDERLKRLALNAALTALVLSL 133 Query: 145 LIAG--YAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNS 202 L++ Y I + ++ G T + + + + + + Sbjct: 134 LVSYARYFGIIPLYTDPNQAYIGFQNRITFGLYTSIASYIFAYRAIKHSDKNWKVAYIIL 193 Query: 203 CAV--LYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 LA+ R ++F + L Y ++ + I + +++ + Sbjct: 194 FLSSSFNTLAVNNGRTGYVIFFALTAMFL---YRNIQPRWRLPSAGVALITITALLLASP 250 Query: 261 PIQNRYNEALNDLNSYTNAN--SVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNL 318 ++R ++++ + +S R + ++I +P S Sbjct: 251 VSRDRIERSISNAETIQQKAPVEQSSTVIRWQFLKNSIDIIRSAPLFGHGTGSFESQYEK 310 Query: 319 LVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY----KKRALG 374 R+ G + + + HN+ + S G+ G+F +F +++ A + + Sbjct: 311 ------RIIGTTQVGSSNPHNDYLLILSQLGVFGLFFEIFFIATIYIKARLMNNESQEWA 364 Query: 375 LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 +L I+ GL+ ++ A ++ ++L Sbjct: 365 YALLVAFILYSGLNSTLLDAGEGRFFVVLLAIVL 398 >UniRef50_C9LNB5 Inorganic carbon transporter/0-antigen polymerase family protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LNB5_9FIRM Length = 408 Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 55/415 (13%), Positives = 120/415 (28%), Gaps = 52/415 (12%) Query: 29 CFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIW 88 + + S ++ + L+ G K + G + Sbjct: 13 ILICLYLTIFLLPLSSWLFYFALVPAA--LLSMGDIFLTKRKVNYGGKWGWFGGGFLICS 70 Query: 89 YSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAG 148 + + F + ++ F ++ L + KK ++ ++ +I G Sbjct: 71 FLSVFNAPDKFFSIFNWCFLPLAYAFF-YVLISTYLAGEDGKKKALYVFLAGAVCVVIWG 129 Query: 149 YAMY------------------INSIHENDRISFGVGTATGA-AYSTMLIGIVSGVAILY 189 + Y R+ +G AY MLI + + A+ Sbjct: 130 FIQYADAGCMARDLNAEGWVDPERFPLLRRRMFSTLGNPNLFGAYLLMLISVFAPFALGE 189 Query: 190 TKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIA 249 LF + LALT +R + I + + Y + L+ Sbjct: 190 KNNKRKILFAGFLFVLSVCLALTYSRGAWISLAGIVLGLAVFYDKR--------FGLVFL 241 Query: 250 ILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSA 309 + I+ ++ + R+ + TSL RLA++E + + + P Sbjct: 242 AVPLILFFYHGQVAERFISLFS--------GEDTSLSLRLALWESTIAMIEEHPLLGIGW 293 Query: 310 ESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 S + N H H+ + + G+ G +F ++++ Sbjct: 294 GSYWLAYPEY----NFFIEDASVVIFHAHDMYLHIPAEVGIPGGILYFLFFFGQGVMSWR 349 Query: 370 KRALG----------LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNR 414 G ++L L G+ D +++ + + L + R Sbjct: 350 IWRRGVGVMKLFGLSGMLLVLSAAIDGIGDYALFSCPVSCCFWALSALCVSEERR 404 >UniRef50_Q7NME7 Glr0819 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NME7_GLOVI Length = 467 Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 88/279 (31%), Gaps = 22/279 (7%) Query: 145 LIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCA 204 L+ DR++ T AA +L+ V+ L + L A Sbjct: 178 LVLLVIGSRQEAGILDRVTAFFAWPTSAAAYFLLVLPVALSTALGGEARLRPLAWAAFGA 237 Query: 205 VLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKP-IQ 263 V L T +R ++ + VA L+ P ++ +A+ ++ + Sbjct: 238 VGIALVGTASRNAWIIALLASVALLVVARRLVPVLSLAAAAAAVAVAGLGPTEWSVVELL 297 Query: 264 NRYNEALNDLNSYTNANSVT----SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLL 319 R A + S T SL R ++I + + P++ ++ + + Sbjct: 298 RRVVPAALWQKVAESVTSGTASFESLINRFDAWQIAFEMTRRRPWTGWGLQTFPFVESEI 357 Query: 320 VAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL------ 373 + +H HN + + GL + Y + ++ + Sbjct: 358 FGRD-------AANLLHAHNLYLTYSAETGLPAALLLVGFYLWTLCVGVQRAVMLKGVAR 410 Query: 374 ----GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 GL+ + GLSDV + I + L+ Sbjct: 411 WQLAGLVAALASYLLFGLSDVPFYDARINGLFWLWSGLI 449 >UniRef50_Q0B1E1 O-antigen polymerase n=9 Tax=Burkholderia RepID=Q0B1E1_BURCM Length = 442 Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 47/367 (12%), Positives = 102/367 (27%), Gaps = 18/367 (4%) Query: 33 MIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAF 92 + I + FSI + + + + L + + + + GLL L + Sbjct: 2 VYITLIALLFSITNFIPVSAIGFAPICLCAWRLFDRRYPPFVT-CLSVFGLLALGSTLLY 60 Query: 93 KVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMY 152 Y N + + L + + Sbjct: 61 DPQALLSYDFYRHDGNFFVSYAPILAGCLYSHDLDLDKALRRFFVFAVLANLPPYAVYVA 120 Query: 153 INSIH----ENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYV 208 N + + A AA + + G+A + + L LL A+ Sbjct: 121 QNGLLAIFSNANDSFGSYFIARNAAGGFLAMLFCLGLACYVKRHDKLVLGLLVLNAMF-- 178 Query: 209 LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNE 268 + T +R ++L L+ ++ V A Q+ + Sbjct: 179 VFSTYSRGSMLGMATAIAYLLLGRKRWLVAVLMAAAVAFSFGAA------WNHTQSAVDY 232 Query: 269 ALNDLNSYTNANSVTSLGARL-AMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE----H 323 ++ ++ R ++ L F SP S + ++ +V Sbjct: 233 MAHEHTVRDVDAKTANVDVRFGWLWPRALAYFEASPIIGMGVGSFDDEVHDVVNYFGVVG 292 Query: 324 NRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIV 383 + ++ H HN + + G++G+ L Y+ L A + A L + Sbjct: 293 QPRDVTVLHTDAHAHNSYLHIAAELGVIGLALMLAFYWHLVKWAVEGAASTLPARRSSVG 352 Query: 384 GIGLSDV 390 ++ Sbjct: 353 AYTFVEL 359 >UniRef50_B5EPG9 O-antigen polymerase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPG9_ACIF5 Length = 686 Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 50/366 (13%), Positives = 118/366 (32%), Gaps = 31/366 (8%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNI-KNLILPLSIFLIGL 83 + F +I F+ ++ ++ + A+ ++ ++ + + L P I + Sbjct: 10 VGLYAAFPLIAYFLSWYYNGQMIPLLAVTSMVLMVWGALVWWPRLGEGLAWPRGFLPIFM 69 Query: 84 LDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLS 143 L + + + S T Y I + + + + Sbjct: 70 LLWLLWFGLTLFWSGSPYTSWFYFWVLGALPLTFLISVMIPAPVAERAWPWFWRGILLSA 129 Query: 144 FLIAGYAMYINSIHENDRISFG--------VGTATGAAYSTMLIGIVSGVAILYTKKNHP 195 ++++G A++ + + T + AA+ +L + V ++ +K Sbjct: 130 WILSGMALWQYYHWMGQGVGLSGLRPYGPLLDTNSFAAWLNLLFFPILAVYLIDDEKRGT 189 Query: 196 FL-----------FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSI 244 +L +L T +R LL + + + + + + P + Sbjct: 190 RFGSLQLNMVGLFYLATLTVILLAFFSTNSRGGLLAW-VSTMPFVFWAFGRRPGGWARMA 248 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF 304 V+ L S ++ + + S AR M+ ++F+ P+ Sbjct: 249 VITAVALISFSLLGYPQGYDLLGHLAPGFIT-----HNLSTVARGLMWVATWHMFLSHPW 303 Query: 305 SFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 S + RL G L + + HN+ +E + GL+ + L +L Sbjct: 304 LGTGLGSYFLNYPAY-----RLPGELASAGTYAHNDYLEYLAEGGLINLGFLLGFAATLM 358 Query: 365 YIAYKK 370 Y Y+ Sbjct: 359 YALYRL 364 >UniRef50_C6BCR1 O-antigen polymerase n=6 Tax=Ralstonia RepID=C6BCR1_RALP1 Length = 589 Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 86/260 (33%), Gaps = 7/260 (2%) Query: 151 MYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLA 210 + + R+ + G+ + V + K + + L +A Sbjct: 152 FSMTPLGTGRRMWGNLNQPNHVGSYLAF-GLAACVFVAQEFKRWRLALAVIAVIFLLGMA 210 Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEAL 270 LT +R T + ++ A +A+ + V +L V + N Sbjct: 211 LTISRVTWMHVVVVGALAGLAWSASARGLRRWLAVGASVLLLVAVYEACNWFVSYANVLW 270 Query: 271 N-DLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGA 329 + DL +G R A+++ ++F+ P+ A + + Sbjct: 271 HLDLPGSLGERMQEGVGPRAALWQHAWHMFLAHPWLGGGWGDYAWNQYVQTDR-----LG 325 Query: 330 LEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSD 389 +++ HN +++ + GL+G+F+ + S + K+ L I+ + + Sbjct: 326 NVAMSLNAHNIVLDLLAKVGLLGLFAVTLPFLSFAWSLRKQPITPARAFLLAIILVLAAH 385 Query: 390 VIIWARSIPIIIISAIVLLL 409 ++ + + + L Sbjct: 386 SMLEYPLHYLFFLLPLAFAL 405 >UniRef50_B5EA98 O-antigen polymerase n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EA98_GEOBB Length = 446 Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 51/408 (12%), Positives = 122/408 (29%), Gaps = 26/408 (6%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 L ++ Y+ +T + +L+ L + + + + L Sbjct: 23 LGVVIYLGANIVRPEMLFWGGEGGSFVFVTYYILILAGCLLRGELSGLGQVFQREYLLML 82 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 L + P Y + + + G + + + ++ + ++L L Sbjct: 83 WMLAAIYLSIMLAQFQVPLAG-YFATDIAKTLGLCGLLYLLVKKLADIELLESTLLGCLT 141 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL 200 L M N E + + A+ + + + A K+ ++F+ Sbjct: 142 FLGIWGIEQQMLGNERLEGLGGAAWGDSNGVASVYVLFLPVALAFAYAAGKRRRFWIFMG 201 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 + ++ ++ T++R LL I + + ++ L+ Sbjct: 202 VAAVMVALIVCTKSRGGLLGMVACLFCFAIYARKTAATFKIALLLALLV-----TPFATD 256 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 R N S +R +++ GL +F ++P + E+ Sbjct: 257 AYLERMKTLQ---GVSDTENFEGSARSRFILWQAGLMVFTRNPVVGTGFLTYPEAKMEFE 313 Query: 321 AEHNRLRGALEFSNVH------LHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALG 374 L HN I+ S G+ G L ++ R+ Sbjct: 314 ENFYHLEDHFREWVFRKESKKVTHNTYIQMLSDCGVFGALPFFLLMAGGIRSGFRARSRL 373 Query: 375 -----------LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 L + G+ G + + I + ++P I + +V+ ++ Sbjct: 374 KQEQREAPSLWLAGCSAGLTGFSVCIITIDSVTMPFIYVQLVVIGILS 421 >UniRef50_B8FGY0 O-antigen polymerase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGY0_DESAA Length = 408 Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 52/408 (12%), Positives = 111/408 (27%), Gaps = 48/408 (11%) Query: 23 IITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIG 82 + + + I + F + A L S++ R + N + +F G Sbjct: 15 VCLWAGALVPVGIVIGNVGFEAFVALAGAAWILRSIVARDKTMERVADNPLTAPWMFWFG 74 Query: 83 LLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSL 142 + + F+ L + L + Sbjct: 75 AILISLMVNGAGSKGIMHDIA---------FVRFFLFGLAMLDVSNRRPVGPYLIAGLAA 125 Query: 143 SFLIAGYAMYINSIHENDRISFGVGT--------ATGAAYSTMLIGIVSGVAI----LYT 190 L A + + D + + A + +G A+ + Sbjct: 126 GVLFAAFNTILAYTIGVDMFARSLERYTGKLKEAARYSGLCAYACVFFAGWALGDKNILQ 185 Query: 191 KKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 K + LL + + TQ R +L CV + + ++ Sbjct: 186 NKKRAAILLLIAAIAFGQIVQTQVRTVVLAVLAGCVFIVFYGQGRKFGFKKVGLIAAGIF 245 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 V + N + S+ R ++++ + I+ + P Sbjct: 246 SLLGVAFYLGEWWN-----------------MESMYDRWVIWQVAVEIWKEHPVVGAGVG 288 Query: 311 SRAESMNLLVAEHNRLRGALE-------FSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSL 363 S ++ + A H HN + G+ G++G+ + +L Sbjct: 289 SFQDAFARISASGLVPPWEAPDGRVYFNVEQTHAHNLFLMIGACTGILGLAAFSWLMVRA 348 Query: 364 FYIAY---KKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 + Y K GL + ++ IGL+ I+ + +VL Sbjct: 349 CRLIYANPKGWRNGLPAWPIVLLVIGLTGFNIYHSWYHALFAFFLVLS 396 >UniRef50_Q8YM67 All5073 protein n=20 Tax=Cyanobacteria RepID=Q8YM67_ANASP Length = 475 Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 46/420 (10%), Positives = 114/420 (27%), Gaps = 42/420 (10%) Query: 22 EIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLI 81 ++I L ++A ++ + + + A V L+ + + N +L+ P+ + ++ Sbjct: 46 DMIAAALLSLIYVLAPFVSSTLVGVL-LIACVGFWLLLTLSDEPSSNNNSLVTPIHLLVL 104 Query: 82 GLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYS 141 + + T L + + + ++ S Sbjct: 105 LYWGIAAVATALSPVKKAALTDLLTLTLYLLLFALC-----ARVLRSPRLRSWIITLYLS 159 Query: 142 LSFLIAGYAMYINSIHEND---------------RISFGVGTATG-AAYSTMLIGIVSGV 185 S +++ Y M R+ +G A Y + Sbjct: 160 ASLVVSIYGMRQWRFGAPPLATWVDPESTLSKTTRVYSYLGNPNLLAGYLVPAVIFSLMA 219 Query: 186 AILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSI- 244 ++ L + L T +R + + + A + + Sbjct: 220 VFVWQGWARKSLAVTMLFVNTACLIFTYSRGGWIGLVVAVLGATALLVDWWSVQMPPFWR 279 Query: 245 VLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPF 304 + IL +I + S +S R +++ + P Sbjct: 280 TWSLPILLGGLIGVLLIAVLFVEPVRFRVLSIFADRQDSSNNFRRNVWDAVFEMIRDRPI 339 Query: 305 SFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLF 364 + + + + R + + +E G +G+ L+L Sbjct: 340 IGIGPGHNSFNKVYPLYQRPRYSALSAY------SIFLEVAVEMGFVGLACFLWLIIVTI 393 Query: 365 YIAYKKRA-------------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 A+ + +G L LG++ G D I + + + + L+ Sbjct: 394 NTAFVQLRQLRQSANVQGFWLVGALATLLGMLAHGTVDTIWFRPEVNTLWWLMVALIASY 453 >UniRef50_B0THF5 O-antigen polymerase family protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THF5_HELMI Length = 666 Score = 90.9 bits (224), Expect = 9e-17, Method: Composition-based stats. Identities = 43/370 (11%), Positives = 103/370 (27%), Gaps = 44/370 (11%) Query: 64 QENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLT 123 Q F + + +S + I + Sbjct: 299 QWVTKRDFRWRIHPTFFALTAFISLLLFLFLIDSTYPRLSVPLDGLRVIVQHMLWFYIAV 358 Query: 124 LTSQLKSKKESVLYTLYSLSFLIAGYAMYINSI---------------HENDRISFGVGT 168 + + +L + IA + +Y + R VG+ Sbjct: 359 QLVKTPRQAALLLILFTLVGTAIAAFGVYQFIVKAPMPENWVDQAELGSITTRAFSIVGS 418 Query: 169 ATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAA 228 +L ++ K +L + + + + +R L + Sbjct: 419 PNILGSLLVLTTPIALGLAYRGKTIQRLFYLACAALMGASMLFSFSRGAWLAIAAAIILF 478 Query: 229 LIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGAR 288 I + ++ L+ I A ++ I + +R + L+ ++ R Sbjct: 479 GILQDRR--------LIALLIIGAILLPIASPAAADRVSYLLS-----PEYFKKSAQDGR 525 Query: 289 LAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLK 348 L +++ L + P + + E+ L ++ N ++ + Sbjct: 526 LERWDLALEKVAQRPLTGIGLGRYGGAAAENNKEY------LPHRTLYTDNYYMKTAAET 579 Query: 349 GLMGIFSTLFLYFSLFYIAY----------KKRALGLLILTLGIVGIGLSDVIIWARSIP 398 GL+G+F+ + L S+ A+ + A+G+ G+V + + + Sbjct: 580 GLLGLFAFIALMVSVLRTAFGTAIHSPPPRRALAIGVACGLFGVVLHNAVENVFEVPLMV 639 Query: 399 IIIISAIVLL 408 LL Sbjct: 640 TSFWLCAALL 649 >UniRef50_C1I9Q4 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Q4_9CLOT Length = 433 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 61/413 (14%), Positives = 135/413 (32%), Gaps = 25/413 (6%) Query: 14 TLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLI 73 + ++IL + I+ F + ++ I+ V + ++ + +N ++ I Sbjct: 23 KILVNIILYSVIVIMPFIVVNVSSPRYVIGKMIFLYVVGVISIITLIGLKVTEFNFEHKI 82 Query: 74 LPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE 133 + + + + ++ + A + ++ +I+ L S+ Sbjct: 83 ALVFLITMLIPSIL-------SPQKYVAFMGNIQRNEGFVMYCIYILLFILASKYFVLNR 135 Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGV------------GTATGAAYSTMLIGI 181 +L + S ++ Y + + + ++Y + + I Sbjct: 136 KLLNLVLIFSCIMGVYGILQFYGIDPVQFWMFGFIQVSDSIGMIGNRNFFSSYLCIFLFI 195 Query: 182 VSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFT 241 + I Y K +L+ S + L T TR+ L F I + LI K K+ Sbjct: 196 SMAIYIFYGGKR----YLIYSIILFTALICTLTRSGWLAFIIYSIIGLIFVI-KDKKRLK 250 Query: 242 SSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIK 301 S ++ I+ L+ +++ A N + + R+ + I + F Sbjct: 251 KSGIVFISFLSIFLLLNLSTNGKIIGRATNTIAIDETGIAKVEDSGRIEILNISWSAFKD 310 Query: 302 SPFSFRSAESRAESMN-LLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLY 360 +PF ++ ++ +H HNE +E G++ + S L L Sbjct: 311 NPFIGWGPDTLKYRLDSQYSEKHQEYINKHSAYIDKSHNEFLEYAVSNGILNLISYLLLI 370 Query: 361 FSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 + Y K L + L + L I + I I L + Sbjct: 371 GVIMYKLIKNINNNLFKVLLLTLLGYLVQSFFNISVIMVAPIFWIFLGFCVKE 423 >UniRef50_A6GLX2 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLX2_9BURK Length = 407 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 59/409 (14%), Positives = 134/409 (32%), Gaps = 25/409 (6%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 L+ I I+ + A++ +++ + N ++ PL + Sbjct: 6 LQRINPAWFLAGAAFFLPIAPGPSNIFLLLALIASVAVPGLKSRLNVAMQQ---PLLLLG 62 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 + L L+W S S + + YL+ + FI L L ++ + L Sbjct: 63 VSLASLLWISVAWTKGSVDDSMH--YLSKYSTLLMAPFIFGLFLVYPKAIRQVLFAFVLS 120 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTK--------- 191 + L+ Y +++ + + IV + + ++ Sbjct: 121 AWLTLLLSYGIWLEVPVLLNAFPLVDPSYPTVFKLHTTQSIVLCLGLYFSWALAMGEANP 180 Query: 192 -KNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 L L VL V L + + + + L+ + K K + + AI Sbjct: 181 ASKKKLLALAAVFTVLTVFNLLNMTHARIGYVSLVLPLLVYLFMKFSWKGGLIALAIAAI 240 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYT-NANSVTSLGARLAMYEIGLNIFIKSPFSFRSA 309 +A++ ++ + +R ++ N++ +++ + T +GARL+ + I L IF + P Sbjct: 241 VANVAYFGSETVSSRVDKTYNEVVNWSPDKYENTDMGARLSWWHISLQIFREHPVVGAGV 300 Query: 310 ESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 + + + HN+ + GL+G L + + + Y+ Sbjct: 301 GAYPSEFLKHAQPMGVPP------HNNPHNQFFLLLTQIGLVGPLLFLAILIAHYLSIYR 354 Query: 370 K---RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRN 415 L L L + + + + + + L N Sbjct: 355 LTEPERLASAALFAVFAFGNLFNSFLLDSAERTLYMILVSGFLAAANHQ 403 >UniRef50_Q30PV6 O-antigen polymerase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30PV6_SULDN Length = 401 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 41/363 (11%), Positives = 119/363 (32%), Gaps = 13/363 (3%) Query: 62 GRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVF 121 +++ N + +IF + L++ A + + + + + +V Sbjct: 42 YKRDYKNTFETLKSSAIFTYIAIFLLYIFATLLWSEDIKEGINQIRLYGYWILLLPPLVV 101 Query: 122 LTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGI 181 L + S + L ++ L Y M+ + + N+R S + ++ + Sbjct: 102 LVQKEWIWSMLSAFLLGMFVSEIL--AYGMFFDFWNINERDSSYPTPFMTHIHYSIYLAF 159 Query: 182 VSGVAI-----LYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKS 236 + + + ++L L + RA L F + + + Y + Sbjct: 160 TAILLLSRVFCKKLLLKEKLPYMLFFLLSTTNLMFSTGRAGQLAFFVALIVLIFLKYRIT 219 Query: 237 PKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGL 296 K S + I + + + R + + D+ + N S G R+A + + Sbjct: 220 VKSVVMSFFSITVIFL-LAYNSLELFKQRVDAGVKDVQNIAVQNYNNSFGIRVAFWLVAG 278 Query: 297 NIFIKSPFSFRSAESRAESMNLLVAE---HNRLRGALEFSNVHLHNEIIEAGSLKGLMGI 353 + + S ++ + + H HN+ + G +G+ Sbjct: 279 EVLKEHSLLGNGIGDYKVSTKEILGKKEFGLSDETKEFMTTQHFHNQYLMVAVQGGFIGL 338 Query: 354 FSTLFLYFSLFYIAY--KKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVI 411 L++ F + ++ ++ + I +++ + + ++ + + ++ Sbjct: 339 TLMFLLFYKFFTLRIEDRELKEISVLGFVVIAVGSVAEPLWMLQFPLMLFLFITSISIIA 398 Query: 412 NNR 414 + + Sbjct: 399 SKK 401 >UniRef50_Q2LRM7 O-antigen polymerase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRM7_SYNAS Length = 418 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 47/397 (11%), Positives = 117/397 (29%), Gaps = 34/397 (8%) Query: 28 LCFFSMIIAFVDNTFSIKIYNITAIVC-LLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 C + + I+ + ++ + ++ I+ + L + Sbjct: 16 FCMIMGSLLPAGIVAGNAGFESIIILVDMAWILRWVLLKENPLQKQIIIHPLILPWIFWF 75 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLI 146 + N + + + +F ++ ++ ++ + + + Sbjct: 76 GTMIVSLLINGQEIGGWGHDIAFIRYLLFVVALIDISQRLPVQKYLIVGMGVGVVWAVIN 135 Query: 147 AGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILY------TKKNHPFLFLL 200 A I + G +A L V+ + + + Sbjct: 136 LLSAHIIGYDLFGRPLIRYAGKLKESARIAGLFAYVAPFFLGWAVSDKNMTTRRRIFIAV 195 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 L ++ T R T L LI + K + L A +A I + Sbjct: 196 AGAFALVLVLQTNIRTTFLASAAGIAIYLIYFLYKKSRWTIVIPALFFAGIALIAKFWIP 255 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 + +S+ R+ ++++ L ++ + P S ++ + Sbjct: 256 YFNDL-----------------SSIYDRIYIWKVALAMWQEHPLFGVGVGSFQDAYKSVA 298 Query: 321 AEHNRLRGALEFSN-------VHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK--- 370 A N H HN ++ + G+ G ++L+ + Y+K Sbjct: 299 ASGIVAPFVAPDGNIFSAPEAAHAHNFLLMLLACGGIAGFSMFVWLFVNAVRRMYRKPDG 358 Query: 371 RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVL 407 +GL+ + + IGL+ +++ + IVL Sbjct: 359 WRIGLISWPVVALLIGLTGWSVYSDWYQAVFAYFIVL 395 >UniRef50_A8RE07 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RE07_9FIRM Length = 818 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 54/435 (12%), Positives = 129/435 (29%), Gaps = 49/435 (11%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 K + I + + I + + + + L L++R + K +I+ Sbjct: 7 KVTSIELYKILFMVCSLLYILPKGDVVASILLKGMLVWGFLLLVIR-----FYQKRIIID 61 Query: 76 LSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSF------IVFLTLTSQLK 129 F+ ++ + F + R ++ + + + L Sbjct: 62 NKFFIFFIIFTLLSIIFNFQDGFIRNIKDFLYLILEVVLLTQVDKGDSKNILIFNRILLG 121 Query: 130 SKKESVLYTLYSLSFLIAGYAMYINSIHEND--RISFGVGTATGAAYSTMLIGIVSGVAI 187 +L F I + I R+ G A ++ + I Sbjct: 122 FMTFGYTVSLLIFFFRIPQVPGFEKFIMSYTEGRLWGWCGNPNTLATMSLFGLFAAFFNI 181 Query: 188 LYTKKNHPFL----FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSS 243 K+N L + L L L+Q+R+ + F ++ A+ K S Sbjct: 182 YLRKENLSVLNKLGYGFIIIEALACLTLSQSRSGFVGFAVLVFGAVFFIGIYKNKHIIGS 241 Query: 244 IVLLIAILASIVI----------------IFNKPIQNRYNEALNDLNSYTNANSVTS--- 284 I+L + I + V + N Y D + N +S Sbjct: 242 ILLALIIGIASVFMLEVYGWGLRQMPSEKLAISVNSNGYFSIQEDGSDGGEVNPSSSDMG 301 Query: 285 ----------LGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSN 334 R +++ GL++ ++ + + +N + + + Sbjct: 302 LENREIGSDYSNGRFTIWKGGLSVAKENILFGVGQNALNDEVNQKLPKDYVKQ--SPKIA 359 Query: 335 VHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK-RALGLLILTLGIVGIGLSDVIIW 393 ++HN ++ + G+ + + + F+ K+ L + ++G L + Sbjct: 360 ANMHNIYLQVLATSGIFAFIFFVLQFVNSFWKRRKEIFNDALKCMFFVLIGCMLIINLFD 419 Query: 394 ARSIPIIIISAIVLL 408 + I + + + Sbjct: 420 SNIIGFMNLFIAGMF 434 >UniRef50_Q3SHP5 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHP5_THIDA Length = 415 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 51/399 (12%), Positives = 126/399 (31%), Gaps = 12/399 (3%) Query: 27 ILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDL 86 +L + +++ + + ++ + + +L L + + + L Sbjct: 14 VLAWSFLLLLPFARSSELPMFIMAILGGILLWKHGRAVAWEGGAKTFSLLFLCIWVPIAL 73 Query: 87 IWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLT---LTSQLKSKKESVLYTLYSLS 143 D+ F+ + + L +I++ G +++++ L + K + L + + Sbjct: 74 -----SVPDSLWFKKSLSTALTFPRIWLAGLYLIWMLREPLARERLFKLSAWLLVFWVVD 128 Query: 144 FLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSC 203 LI Y H G+ T L + V +++ + L Sbjct: 129 ALIQAIVGYDLFGHAYPERLNGIYGPTNWKLGLTLAMLSPIVWEYFSRHGTRWQLALAWL 188 Query: 204 AVLYVLALTQTRATLLLFPIICVAALIAYYNK---SPKKFTSSIVLLIAILASIVIIFNK 260 V+ L R + ++F + V Y + P + +V+ + V N Sbjct: 189 GTAAVVLLASNRESWIVFAVATVMWTWVYARRLAFHPVRLLGPLVVAAVVAGVGVYQVNP 248 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 R +++L+ + + + S R+ ++ L + P + S + Sbjct: 249 KFAQRVDQSLSAFDFTYESLNNASS-YRVHLWNNALTVLKNHPVNGAGVRSYRYAYAKYA 307 Query: 321 AEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTL 380 ++ ++ H ++E GS G +G+ L + L A L Sbjct: 308 KPNDPYLSPDGTGMIYAHQLVLEVGSETGGIGLVGLLMFFAVLIRSAQGMSREYLAWPAW 367 Query: 381 GIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 V L + ++ I+ ++ Sbjct: 368 LGVFAWLFPFNTHTAIYSAYWSLVVGWMIAISRTAPSVE 406 >UniRef50_D1CAK4 O-antigen polymerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1CAK4_SPHTD Length = 480 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 120/355 (33%), Gaps = 37/355 (10%) Query: 16 KSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILP 75 S++L I+ + + ++ + I + + L + ++ +LP Sbjct: 53 SRSLVLAILLMSGLVDLLTPFRIGPLSAMGVTTILYAIGSWFVWLLRAELPARLRRALLP 112 Query: 76 LSIFLI--GLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE 133 ++FL G+ ++WY N I F IV ++ + Sbjct: 113 FALFLFWAGVSMVLWYRPSV----------EGVQNLLVIVAFLGLIVLTANETRRSPEFI 162 Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193 L + + + +IA ++ G + + VA+ + Sbjct: 163 DTLGRVMTAATVIAVVLQVLSYHLGV--------MPAGFGIQARSFALFALVALAWQLGR 214 Query: 194 HP---FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAI 250 + A++ ++ ++ +R ++ ++ A+ +S + + + VL + Sbjct: 215 WRSGDRRAFWAALAIVGLIGISLSRTAFVVGVLLFPAS--HMRLQSVRGWFQAGVLGVGA 272 Query: 251 LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 + + I ++ R DL+ ++ ++G R A +EI L + KSP + Sbjct: 273 VGLLYTIVSRVEPLRARFFEGDLSLKVGGIAINAMG-RTAFWEITLASWRKSPLIGNGSG 331 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFY 365 S + H HN+ + GL+G+ L Y L + Sbjct: 332 SAQPLIEAYFP-----------GLGHPHNDYLRILHDYGLIGLAIWLVGYLVLLW 375 >UniRef50_B4DAG7 O-antigen polymerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAG7_9BACT Length = 634 Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 29/315 (9%), Positives = 80/315 (25%), Gaps = 17/315 (5%) Query: 62 GRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVF 121 R+ ++ L I Y++ + + Sbjct: 46 RRRTLIPRGATECLVAALLFCAYISIRALFSPEQYLARTDLYNALAGVLLYLLVALNLTS 105 Query: 122 LTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHEND-----RISFGVGTATGAAYST 176 L + ++ + ++ R S G + Sbjct: 106 ARWRLLLVGAILVLAVINCAIGAVQFTKGEFVPFSFLPHPVYRNRASGFYGYPNHLSGFL 165 Query: 177 MLIGIVSGVAILYTK--KNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYN 234 + ++ +++ L S A L + +T +R + + + + Sbjct: 166 EIALMLGLGVAFWSRCASWVKVLAGYISGATLLGILITGSRGGYISTTVGLLVFALLSLV 225 Query: 235 KSPKKFTSSIVLLIAI-LASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYE 293 K + ++ ++ L I + Q + + + S R+ +++ Sbjct: 226 LVGKLASGRLLGVLFASLLIISGVAWGVKQVMWKSSFLQTRAEQTLTVDAS---RMRLWQ 282 Query: 294 IGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGI 353 F P + + A+ +H HN+ E G++G+ Sbjct: 283 AAWKQFRLQPVVGTGSGTYLYYGRQFRN------PAIHTDPIHAHNDYFELLGEYGIIGL 336 Query: 354 FSTLFLYFSLFYIAY 368 + + + Sbjct: 337 ICAVIFVETHLRRGW 351 >UniRef50_C1XRI3 O-Antigen Polymerase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XRI3_9DEIN Length = 402 Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 42/382 (10%), Positives = 112/382 (29%), Gaps = 3/382 (0%) Query: 32 SMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSA 91 +I + S ++ + L L+ G + + + + Sbjct: 14 VLIALVLFAGLSQGGFSGWGLFGLRVLVGAGLILWLGSVVMRGFIRWPPLPVALAALAYL 73 Query: 92 FKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAM 151 + Y A + VF + S + +L + ++ Y + Sbjct: 74 LITVVGALSSPYPYGSAQALLNTAMFGAVFFLGYACRPSCRPVLLVGFGLGAGILGVYGL 133 Query: 152 YINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLAL 211 + R++ + + L ++ L ++ L+ + + L L Sbjct: 134 WQALSLGLTRVTGLYFNSNHYSGFLALAVPITLGLALSSRGLWRGLWAGLAGLLCVNLIL 193 Query: 212 TQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALN 271 T + L + + L + + +L ++++ +++ Sbjct: 194 TFSWGLLAVALALAGWLLAGFGRRGWAGVLRGGLLALSLVGLALLMLVSLSPQLAGNLGQ 253 Query: 272 DLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRL--RGA 329 + SL +R + L + P+ S + + Sbjct: 254 RTVQLWGDWARVSLESRAGIARGSLELIKTHPWLGVGPGSFVYAWPRYRPPKIETVPQEI 313 Query: 330 LEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKK-RALGLLILTLGIVGIGLS 388 L + HN+ ++ S GL+G+ + L + + + G+ + + ++ GL+ Sbjct: 314 LHKRINYAHNDYLQVASETGLLGLAAFLGFWIVVLGKGSRSLVGTGIKVGLIALLLHGLT 373 Query: 389 DVIIWARSIPIIIISAIVLLLV 410 D + ++ L V Sbjct: 374 DGNLTFIPANAVLAYLFAGLYV 395 >UniRef50_Q31FH0 O-antigen polymerase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FH0_THICR Length = 436 Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 106/327 (32%), Gaps = 8/327 (2%) Query: 47 YNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSY 106 Y + + L L + +++ + + L ++ ++ + A Sbjct: 46 YLVMLVGLPLVLYMNYFKKDLFQATEETLIRFSGLIFLVILTGFFYQNPDLTRFAPTLEG 105 Query: 107 LNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGV 166 + + + L + S+L +SF + YA+ + Sbjct: 106 YSKTVLLPLFLLPMLYFLKFRSIGLLASMLAIGAMISFAMTVYAISHGVPRGGGGVHGA- 164 Query: 167 GTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNS-CAVLYVLALTQTRATLLLFPIIC 225 ML G++ + +Y K F +L+ + L+ +R ++ + Sbjct: 165 --PIIFGDLAMLYGVLLFILAVYFHKEKYFYWLMFFGALGVLSSLLSGSRGGWIVLFTLP 222 Query: 226 VAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSY--TNANSVT 283 + K + + + + + + + + PI++R A +++ + Sbjct: 223 FFLIPFLPKKYRARVSIMGGVGFIFIITAMALLDNPIKSRVLLAFSEIQLILSDESYMGG 282 Query: 284 SLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIE 343 SLG+RL + + F+ +P + LV + H HNE + Sbjct: 283 SLGSRLEFWRLAWLAFLSNPINGIGVGEFYAFKLHLVELGKVPEHLARYK--HTHNEYLG 340 Query: 344 AGSLKGLMGIFSTLFLYFSLFYIAYKK 370 S GL+GI + L+ + Sbjct: 341 ILSGMGLLGILVYSAFFVWLWKFFNQA 367 >UniRef50_A6VTJ6 O-antigen polymerase n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VTJ6_MARMS Length = 440 Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 117/379 (30%), Gaps = 19/379 (5%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 +L S+ + + T +I + + + L+ + + + IL +++ L Sbjct: 24 LILLGIISIALYALTRTGFSEIAGVASAIATLTGFWGLFKYGKVVNSHILFRFVWIAILF 83 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 LI + + + + + F+F ++ +S Sbjct: 84 QLISWGLSQYVTPEWAESSPKLDKITRWFVFIPLAWWVAQYKNATWLIWGCAALGILVSP 143 Query: 145 LIAGYA---MYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL-FLL 200 + G + + + +LIG + L +K + L Sbjct: 144 WVTGDGLDEIIQGINGQRVFFGLRQEQHASLFFGVILIGFLCFTRTLLSKSKWLAIPLFL 203 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFT-------SSIVLLIAILAS 253 + ++ + +R L I + K KK T I L + Sbjct: 204 AIAYCILIIYINSSRQAWLALLITAFFMASYFTVKRFKKATGKQKTTTLGIFLAGILSLG 263 Query: 254 IVIIFNKPIQNRYNEALNDLNSYTNANSV----TSLGARLAMYEIGLNIFIKSPFSFRSA 309 I+I N+ I R LN+ + + +S G RL + + P + Sbjct: 264 IIISNNETIVERVMLEKEALNAIASLDFDDVPYSSFGIRLHSWVAATDFIKAKPIFGWGS 323 Query: 310 ESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 R+ M L + HLHN IE G++G+ + ++ + +K Sbjct: 324 NGRSLVMKKT----EWLPDDIRKDFGHLHNIYIEMLVNFGIVGLAFYISIWVVMAKSLFK 379 Query: 370 KRALGLLILTLGIVGIGLS 388 + G + +G + Sbjct: 380 QIKAGKIEKQVGYFFMSFV 398 >UniRef50_Q2P774 Membrane protein n=23 Tax=Xanthomonadaceae RepID=Q2P774_XANOM Length = 444 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 78/234 (33%), Gaps = 5/234 (2%) Query: 179 IGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPK 238 + +S +L + H + + + + AV VL L +RA+ + + +I + + Sbjct: 198 LASLSPFLLLALGRRHVWAWAVGAAAVGIVLVLAGSRASWITYGVIVLLSGWQLLGGRR- 256 Query: 239 KFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNI 298 + + A+LA V+ + R + +L R ++ L + Sbjct: 257 --LLVVAVAGALLAIAVVAVAPQARERIQRTTLAFGNGEQG-VDQALSGRAQIWGAALCM 313 Query: 299 FIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLF 358 PF+ A + + H H ++E + G++G+ L Sbjct: 314 IRAHPFNGVGARGFRHAYPACNPAPGQAPAWGGGPAFHAHQIVLEILAETGVIGLLLWLA 373 Query: 359 LYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVIN 412 + + A++ ++ + ++ V + L L++ Sbjct: 374 -GAAQAWRAWRYSSVVAREQARPAMIALVATVFPLNTHLAFYSSFWGGLSLMLA 426 >UniRef50_A4ACC3 O-antigen polymerase n=2 Tax=unclassified Gammaproteobacteria RepID=A4ACC3_9GAMM Length = 419 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 90/277 (32%), Gaps = 12/277 (4%) Query: 153 INSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALT 212 + I+ G + L ++ + + P + VL ++ L+ Sbjct: 131 LGYGVGEGYINGLFGDDDNIKFGVALAFLLPVGLVYGLRHWPPVVVGGFLLLVLILIVLS 190 Query: 213 QTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIF--NKPIQNRYNEAL 270 RA + + A I Y+ + + +L +A++ + + ++ R + Sbjct: 191 GKRAAWISVSVELAALGIYYFFRGRLGLLKVVAVLAVGIAALTFAYQSSDWVRERSVVIV 250 Query: 271 NDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLR--- 327 + L+ + + G RL ++ L + + + E +R Sbjct: 251 SALDEPSYTAVNKATGLRLPIWRTALAMGEAHWINGVGPRGFRYAYRDFAVEGDRWARPA 310 Query: 328 -GALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK-----KRALGLLILTLG 381 A H H ++E + G++G+ F L + + + L Sbjct: 311 GEAGGAKASHAHQLLLELWAETGVVGLMGYGIFLFLLGSAWQRGDAHARSRALPYGVALV 370 Query: 382 IVGIGL-SDVIIWARSIPIIIISAIVLLLVINNRNNT 417 V L + + ++ +++ I + L+ + + Sbjct: 371 GVLFPLNTHLAWYSSWHALLLWLFIGVFLLALSEKRS 407 >UniRef50_Q5E8K0 O-antigen ligase n=1 Tax=Vibrio fischeri ES114 RepID=Q5E8K0_VIBF1 Length = 410 Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 53/404 (13%), Positives = 134/404 (33%), Gaps = 17/404 (4%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 + I YI +++ F + I + S I ++ + + Sbjct: 18 VLAIVYIPILWTLSFNFTLPNGRSIASKLLVISAIFSFIYFRKRVFLFKEKPKTFKILIT 77 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLY 140 + +++ S + + ++ ++ I +I K +++ + Sbjct: 78 SLFIIILFRSILFLYHGEQTSSIRAFG------IIFLYIYSFPYWLVKKEHIKNLTFISL 131 Query: 141 SLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLL 200 L L A + N R Y+ ++ V ++ TK + + + Sbjct: 132 FLFGLDAFIHVINNGF---TRYGGNTNPNPYGLYAALIFIFVYIYNLINTKTHILYKTIP 188 Query: 201 NSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNK 260 + ++Q+R + + + IA + K + I+ + + + Sbjct: 189 LIIIGFLPIMISQSRGVWVSTILTLIIIHIARIKFNIKNISIYIL--TILAIAFSLYSTP 246 Query: 261 PIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLV 320 ++NR ++ + + N +SLG R+ +++ + + + PF E N Sbjct: 247 TVKNRIEATKIEIKNIEHHNLSSSLGVRIQVWKDSIPLIKEYPFFGLG-NKLKEINNTRF 305 Query: 321 AEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGL----L 376 + + +S HLH++ E + +G +G F + I K + + + Sbjct: 306 ENKKISQYSYYYSRNHLHSQYFEFITKQGFIGFFIIIGAIIFPLIIMRKDNDIFVKFCSI 365 Query: 377 ILTLGIVGIGLSDVII-WARSIPIIIISAIVLLLVINNRNNTIN 419 ++ +++V W +I + L L + I Sbjct: 366 SFLCVLLINFITEVPFNWINFTYTYLILILCLTLQSYHSTKDIR 409 >UniRef50_C8PLC3 O-antigen polymerase family protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PLC3_9PROT Length = 414 Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 51/410 (12%), Positives = 126/410 (30%), Gaps = 34/410 (8%) Query: 25 TYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLL 84 + + ++F + ++ L + K I + L Sbjct: 10 IMGYLLYILSLSFFVGKSYNVFSALIVVIFLFHTFKERLFCVFKDKFFIFMSIWCIYMLS 69 Query: 85 DLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSF 144 +IW + S + +++ + L S+ K ++ T L Sbjct: 70 SVIWATHKDGIISAAGVLF--------LWVLLYLAIKTYLDSKDKLERFFKFQTYIVLFV 121 Query: 145 LIAGYAMYINSI---------HENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN-H 194 ++ I F + + +G+ + L + + H Sbjct: 122 AFNALLQFLIGYNIFGVPILDGRATDIFFSSNSRIFPFILPLYVGVFGAMLSLKDRSSSH 181 Query: 195 PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASI 254 L+ +L + L+ +R LLL + + + +++ + I + Sbjct: 182 YILYGSALFGILIAVPLSGSRGPLLLLSVFIPIIVWTSPYRKTAFIMLAVLCVCVISIA- 240 Query: 255 VIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAE 314 + +Q+R + + + R+A+++ + F +P ++ Sbjct: 241 --FNSDKLQDRLISLAHPFENQKH--------LRVAIWKTAIEEFKDNPILGVGFKNFKY 290 Query: 315 SMNLLVAEHNRLRGALEFSN---VHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKR 371 + N H H+ ++ + +G++G + L+FS+ Y Y+K Sbjct: 291 RQFDYYKPEFESYEIDKEQNKMVEHAHSPWMDILAEQGIVGFGFAITLFFSILYNVYRKG 350 Query: 372 ALGLLILTLGIVGIGL--SDVIIWARSIPIIIISAIVLLLVINNRNNTIN 419 L+ S +I +I +I + +++ N IN Sbjct: 351 TFILIGAFSVFYAFSFLNSTFVISKSRWSFFMIFSITIFMLVANYYKYIN 400 >UniRef50_A8HZX0 Putative membrane protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8HZX0_AZOC5 Length = 486 Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 49/400 (12%), Positives = 112/400 (28%), Gaps = 51/400 (12%) Query: 34 IIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFK 93 + + IV L+L Y + L F ++ S Sbjct: 84 FPVLSPLRIPQLLAQLILIVTFWHLVLMRSIRPYWSRELTAFAVFFTFCTASIVTSSGRD 143 Query: 94 VDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYI 153 + ++ + + ++ + + T+ ++ A+Y Sbjct: 144 TSFLFWSDSFSKV---------ALMTLLIAWCTRKAADFQLAGQTIVLAGIAVSCVAIYN 194 Query: 154 N----SIHENDRISFG-------VGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNS 202 + E R++ G A + + + T + F L+ Sbjct: 195 KVHGIGLVEGTRVTIGRDVGSVLGDPNDLALALLFPLSFAGALVVARTNLLNRFYGLVGF 254 Query: 203 CAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPI 262 V+ + TQ+R LL + Y +V +I + A +++ I Sbjct: 255 GFVVAAIICTQSRGGLLGLATVTAVIGSRYVKN------KMLVGIIGVCAMVLLYAVAGI 308 Query: 263 QNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAE 322 R + + S RL + N+ P + + E Sbjct: 309 SGRSSGGAAE------QGIDESSEGRLIAWRTAWNMVKAHPLLGVGLNTFPLNYYFYTPE 362 Query: 323 HNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK------------K 370 + A+ H+ + G +G S + + L ++ + + Sbjct: 363 WDGHEHAV-------HSTWFGVLAETGFLGFTSFITMIGMLIRLSLRCLSVAQGHGVDPR 415 Query: 371 RALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLV 410 + L LT G+ G +S + I ++ + + + Sbjct: 416 FSTAALALTSGLAGFCVSGTFLTQGLSWPIYVTLALTVAL 455 >UniRef50_B4CZW4 O-antigen polymerase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZW4_9BACT Length = 641 Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 51/424 (12%), Positives = 114/424 (26%), Gaps = 51/424 (12%) Query: 21 LEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFL 80 + L ++I V FS+ Y + A LLS + + L+ P ++ L Sbjct: 6 FTLFALALICIQVLIGGVKLVFSLPGYALLAGGALLSFLAVKK--------LVRPPALCL 57 Query: 81 IGLLDLIWYSAFKVDNSPFRATYHS-YLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 + +L L + + +SP + I V ++++ L + Sbjct: 58 VTVLTLAGWVIARALSSPVEYLARADLFMVLGALIVYLLTVMYYTDTRMRLALTGALLIV 117 Query: 140 YSLSFLIAGYAMYINSIHEN-----------DRISFGVGTATGAAYSTMLIGIVSGVAIL 188 + +I R S A +I +++ Sbjct: 118 ALVHVVIGAIQFKQADNFMLLPGIMRPPAYEWRASGFYICPNHLAGLLEMIAMLALGQAC 177 Query: 189 YTKKNH--PFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 + L + L +A+T +R L A + L Sbjct: 178 WGASRPALRVLAAYCALMCLAGVAITGSRGGYLSVVFGLGAFAVLSLWAVQLTRRGGFWL 237 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 + A L +IF ++ ++ RL +++ L F +P Sbjct: 238 MFAGLLVSAVIFVGGGLLFMSQ--SETLHARLGQIYEPHNPRLLLWQAALKQFHLNPTFG 295 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 + + ++ +H H++ +E + G++G Sbjct: 296 TGSGTYLYYGRQF------RFPVVQNDPMHAHDDYLELLAEYGVIGAALGGLFLLVHLVS 349 Query: 367 AYKKRA---------------------LGLLILTLGIVGIGLSDVIIWARSIPIIIISAI 405 +G L ++ + D + + + + Sbjct: 350 GMAGLRKIVHEQISPGAPRLSHDLALIIGALSAVAALLVHSVVDFNMHIPANALFVAFLF 409 Query: 406 VLLL 409 L+ Sbjct: 410 GLMA 413 >UniRef50_A6DE46 O-antigen polymerase n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DE46_9PROT Length = 428 Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 60/409 (14%), Positives = 134/409 (32%), Gaps = 21/409 (5%) Query: 24 ITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILR--------GRQENYNIKNLILP 75 I +L +F +++ FV + I + ++ +L ++ +Q + L L Sbjct: 7 INSVLNYFILLLIFVSLFSTAAIRIVLGLIFILWILENNFQIKFSILKQYIKHSWPLKLL 66 Query: 76 LSIFLIGLLDLIWYSAFKVDN--SPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKE 133 L F I + W ++ F+ Y S+ +++ I+ + K Sbjct: 67 LIFFTIKFFSIFWSNSIYNGFWSGYFKNAYDSFFRHDLLYLLIIPIILTSFKKNNAKKAI 126 Query: 134 SVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKN 193 + +S + + Y ++ + + + I + ++ ++ +K Sbjct: 127 DIFLLGMFISEIFS-YLLFFDLLPHWNFIRGTPYNPSPFLNHSLYSFLLVIFIFTLFEKF 185 Query: 194 HP-------FLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 +FL S L + R L+F I V Y K+ S +L Sbjct: 186 QRTNILIEKLIFLFFSITATINLFINGGRTGQLIF-IFTVFFYAFYKYPKKIKYVVSGIL 244 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 I ++ ++ F+ R N AL ++ N N +S G R + ++F K+P Sbjct: 245 AIIVIFTLAYKFSPIFNQRINNALYEVRGIVNGNYSSSWGGRFLSILVTKDVFEKNPILG 304 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHL--HNEIIEAGSLKGLMGIFSTLFLYFSLF 364 + + + ++ + +H HNE + +G++G+ + F F Sbjct: 305 IGIGNSRKEVFEIIKSNYPNAFDYYKRRLHSDMHNEYAQILVEEGIIGLIIFIMFLFISF 364 Query: 365 YIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 I V + + + + + Sbjct: 365 KQKINDGFYNFFIKLFIFVFTLALFTGNFFSKMFTSFVLFYIFFAISVK 413 >UniRef50_C0QCL9 RfaL n=2 Tax=Deltaproteobacteria RepID=C0QCL9_DESAH Length = 442 Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 49/396 (12%), Positives = 128/396 (32%), Gaps = 45/396 (11%) Query: 36 AFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVD 95 A +++ L ++ R + + L + + Sbjct: 46 APFSGIGIRYSFSLALATILGFVLQRHKLRFGFSAIQRQETLLLLFLCVIWLSSIFGVST 105 Query: 96 NSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMY--- 152 + H + K+ +F +FL K + L+ ++ + L+ G + Sbjct: 106 VDRYSTVDHPTVKFTKVVVF----IFLMTHIITDKNKFNGLFWVFVMCALVLGLQAWELP 161 Query: 153 ----INSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYV 208 I E + + ++ ++ ++ + K + L+ + Sbjct: 162 RRSFIAGRLEGIGGADFAESNFFGSFMAAMLPLIGVQLLRSKKWILKIVCLVAAAFTANA 221 Query: 209 LALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNE 268 + L ++R L+ + C AA++ + KK + L+ + + + ++ R Sbjct: 222 VVLCRSRGALVGIAMGCFAAMLMAPKQYKKK---IAIGLVLGVLGGLYVTDQQFLERMTS 278 Query: 269 ALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRG 328 + S +R +++ G + P + +++ + + E+ Sbjct: 279 IVVS----EEEERDESAASRFRLWQAGAQMVSDHPL-GIGIGNWYQTIVIYIPEYEG--- 330 Query: 329 ALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL--------------- 373 HN ++ + G+ G+F + F + +A+ Sbjct: 331 ------KDSHNTYVKCVAELGIQGLFLFALIIFFALKENSRIKAMSDRLPPEIANDFIIL 384 Query: 374 --GLLILTLGIVGIGLSDVIIWARSIPIIIISAIVL 407 GL I + I+ GL+ +I+ I I+++ + L Sbjct: 385 SFGLCISIVIILTCGLTITMIYTEIIWILLMLPVCL 420 >UniRef50_Q1QWW2 O-antigen polymerase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWW2_CHRSD Length = 446 Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 50/393 (12%), Positives = 123/393 (31%), Gaps = 29/393 (7%) Query: 38 VDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNS 97 + A+ L+++++ G+ + +L +I + L L+ Y Sbjct: 30 LWPEVGEPAGTAMALFGLIAVLVWGKDLKGSAALWLLLAAIGVQILSWLLGYFHHPD--- 86 Query: 98 PFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSI- 156 + ++ AK+FIF +L +++ Y ++ + G + Sbjct: 87 -WISSNPEVDRLAKLFIFIGVAWWLGGSTRWTLALWGASVIGYVIAAFVHGGGVQEWLAG 145 Query: 157 HENDRISFGVGTATGAAYSTMLIGIVS-------GVAILYTKKNHPFLFLLNSCAVLYVL 209 R+ FG+ A + + + + ++ ++ + + L + Sbjct: 146 FNGQRVGFGIRNKQHGAMLFGVCLVGLTVFARRIFMCLGPSRLPIILVWCVLTLISLAGV 205 Query: 210 ALTQTRATLLLFPIICVAALIAYYNKS---------PKKFTSSIVLLIAILASIVIIFNK 260 + QTRA L ++ +I + + T + +L + + F Sbjct: 206 MIGQTRAVWLALSVVAFFGIIIWLMWLVKFHGARSMLRSVTIVVCVLAVVFLGALYTFKD 265 Query: 261 PIQNRYNEALNDLNSYTNANSV----TSLGARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 + R + + + +S+G R+ + + P E R + Sbjct: 266 TLSKRVGYESDVIEKLIDGEFQQLPYSSIGIRIHTWVAAGEWIAERPLVGWGGEGRGLVI 325 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLL 376 + L ++ HLHN +E GL+G+ L F + + G++ Sbjct: 326 ----DHTDWLPDDIKERFGHLHNFFLEVWVAYGLLGLGVIAALAFWIGRGTWLAWRAGVI 381 Query: 377 ILTLGIVGIGLSDVIIWARSIPIIIISAIVLLL 409 + + G + + + Sbjct: 382 PNDMALFGAAFFVYWMIVNQFESYNSFWTGVYV 414 >UniRef50_C6LCR5 O-antigen polymerase family protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LCR5_9FIRM Length = 440 Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 44/351 (12%), Positives = 102/351 (29%), Gaps = 24/351 (6%) Query: 73 ILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKK 132 + + ++L G W + + F++ L S+ + + Sbjct: 83 LWMIILWLYGAASSFWSIDASNAYGVLWNLLKT--------MLACFMIRPRLNSRRRIDR 134 Query: 133 ESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKK 192 L + L+ S +RI +G + +G + + K Sbjct: 135 VLALLLAALVYMLLLLVVRTPASAWGTERIGEVIGQHSNEIGRLASLGALLSFYFMTRKN 194 Query: 193 NHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILA 252 + + A + +T ++ +L+ A I K F + V + + Sbjct: 195 KISVSYAIPFMAFIMTGFMTGSKNAILIIIFQLAAYWILISKSWIKIFEIAFVAVGCVFI 254 Query: 253 SIVIIFNKPIQNRYNEALNDLNS--YTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAE 310 +I+ N+ + + + + + N S RL +F P Sbjct: 255 YWLIMNNQMLYQLVGIRVERMLNLFISGENVDGSTSERLYFIRTAWQLFKAHPVFGIGMN 314 Query: 311 SRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYF----SLFYI 366 + + + + + H +E S G+ G ++F L Sbjct: 315 NFSAYLASIGYSNPVY----------SHCGFLELLSTLGIPGFCVYYSMHFRIAAGLCRP 364 Query: 367 AYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNT 417 A K+ + ++L L + + I + + I I ++ Sbjct: 365 ALKRDKMAAVLLALCLRVLLFDVSTISMYTYNMYITLMIAYCFMLKKEEKN 415 >UniRef50_D2RP26 O-antigen polymerase n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RP26_ACIFE Length = 423 Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 52/433 (12%), Positives = 123/433 (28%), Gaps = 56/433 (12%) Query: 7 LHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQEN 66 + + + L +S L IT+ + + + + I+ I + L+++ G+ Sbjct: 1 MERPRGWGLPASWNLNQITFGVLCVLFFVLPLHQLGAGIIFGICFALNLVNIWKTGQFWP 60 Query: 67 YNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTS 126 + ++ + LL + + + + Sbjct: 61 AIQIPRTISRPLWALFLLSGVSTLWSANPAACALNWLWVVGQE------AGIFYLVLRYA 114 Query: 127 QLKSKKESVLYTLYSLSFLIAGYAMYINSI-----------------HENDRISFGVGTA 169 + ++ + L+A Y ++ S V Sbjct: 115 STGRRTLFLIKIFMISAGLVAAYGIWQYFFSSSLQNLEWIDHQAFKHLSRRAFSTLVNPN 174 Query: 170 TGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAAL 229 + + G+ + + L LT +R + + + Sbjct: 175 ILGTFLVTTVAYCEGLFAPLKGGRTRWALVGIFLLATACLILTFSRGNWVAYFWVLFIFA 234 Query: 230 IAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARL 289 A+Y+K + + I ++ +F + R + TS R Sbjct: 235 GAFYHK-------AFLPFIGGGLGVLYLFWNQLAERLMSIFS--------VHDTSAELRF 279 Query: 290 AMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKG 349 E L++ P + E H HN ++ + G Sbjct: 280 FYLESSLDMIRDHP-FGVGWYGYGYAFPDY-----NFFIDEEVFMYHSHNLLLNVTAELG 333 Query: 350 LMGIFSTLFLYFSLFYIAY------------KKRALGLLILTLGIVGIGLSDVIIWARSI 397 + G+ L++ LF +A + A G + +GI GL+D ++ + Sbjct: 334 IPGLLLFLYVMVRLFLLAREIRHRQRTRPWLRGVACGYMASLVGIFISGLTDHTLFNSQL 393 Query: 398 PIIIISAIVLLLV 410 ++ + +LL+ Sbjct: 394 GMLFWAGNAILLI 406 >UniRef50_C9Y124 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y124_CROTZ Length = 467 Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 43/324 (13%), Positives = 107/324 (33%), Gaps = 21/324 (6%) Query: 112 IFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAM----------YINSIHENDR 161 + + Q + V + + + Y ++ Sbjct: 16 LLFWCGLTHLYVTWLQKRQVLLVVFILALAQAVIGLIQTFMPHLAMRLYEYDWLRNQGRP 75 Query: 162 ISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLF 221 A++ IG + + + + L + + +VL L Q+RA + Sbjct: 76 YGIFQQVNLLASFLASGIGCGFLLLLQQRLRRNALLCIAGLGLLTFVLVLNQSRAGEIGA 135 Query: 222 PIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANS 281 +I + + + P + ++++L+ A+ I +N + + Sbjct: 136 ILIVLCLAALLWRQHPARIAAALILMTMSAATAWYITQHT-----TVLVNGVPYSMARDY 190 Query: 282 VTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEI 341 +S AR + I + ++ P+ + + + V H H HNE+ Sbjct: 191 ASSTHARWKILAITWQMIMEKPWLGWGYGTFEYAFSRFVLAHPEYGYTYSSIVTHPHNEL 250 Query: 342 IEAGSLKGLMGIFSTLFLYFSLFYI---AYKKRAL--GLLILTLGIVGIGLSDVIIWARS 396 + A G++ + L L+ I A+++ + G +L + ++ + + Sbjct: 251 LYAWFQGGVVALAGMLLLFAGWVKIVITAWRQGRMQTGYALLIIPLLVHLNLEYPFYQSF 310 Query: 397 IPI-IIISAIVLLLVINNRNNTIN 419 + + I + L ++ N N T+ Sbjct: 311 VHFGLFILLLRLGVIDNPLNQTVR 334 >UniRef50_C5V422 O-antigen polymerase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V422_9PROT Length = 568 Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 59/394 (14%), Positives = 122/394 (30%), Gaps = 17/394 (4%) Query: 26 YILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLD 85 ++L F + TF + + V L+L+L G I+ L FLI L+ Sbjct: 2 WVLPFLHYRHQYPLTTFEQEWLSALMGVLSLTLLLTGDYWQAPRLPRIVQLPAFLIALVL 61 Query: 86 LIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFL 145 L L T + + G+ + + L L LS L Sbjct: 62 LQSSLGMMAYFDQSLLYLLYLLFTLLLMMLGARLREVFGLEFLAVVLAGFLLVGAELSAL 121 Query: 146 IAGYAMYINSIHE--------NDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFL 197 I Y + + + A +G++S + +K Sbjct: 122 IGILQHYRWHSWFDSVVVMKVSTGVYGNLAQPNHFASYIT-LGLISLGVLFGQRKLPAGF 180 Query: 198 FLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVII 257 L + +L+VL L+ +R++ + L+A+ ++ +L + ++ Sbjct: 181 VLALALPLLFVLTLSGSRSSW---LYLLFMLLLAWRGMKTLPQLRPVMHYCVVLLAGFVL 237 Query: 258 FNKPIQNRYNEALNDLNSYTNANSVTSLG-ARLAMYEIGLNIFIKSPFSFRSAESRAESM 316 + +Q + + + TS G RL ++ IF +SP+ A Sbjct: 238 MHGVVQLSFMKGAGSNFDIFQRVADTSSGSIRLQLWHEAWLIFKQSPWMGAGFGQFAWQH 297 Query: 317 NLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRAL--G 374 L E + + + H+ + + + G+ G+ F A Sbjct: 298 FQLGPE--LRQVNINGLYNNAHSLLFQLAAEAGIAGLLVLFAALGVWFKGGRVCSAPHWW 355 Query: 375 LLILTLGIVGIGLSDVIIWARSIPIIIISAIVLL 408 + + L + +W + + + Sbjct: 356 GYAILGVLAIHSLLEYPLWYVYFLAVAALLLGMF 389 >UniRef50_Q67QF8 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67QF8_SYMTH Length = 540 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 96/320 (30%), Gaps = 44/320 (13%) Query: 105 SYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIH------- 157 S+ N G + + ++L + + + L+ +A+Y Sbjct: 224 SFRNLIIWLTAGLLFWLVADQVRTSRDAAALLGPVLAGAMLMTLWAVYQVFRPPQVEESW 283 Query: 158 -------ENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLA 210 + R+ +G A L+ + + L +L L Sbjct: 284 VDPEQAGQVIRVFASMGNPNYLAEYMTLLLP-PAIGLWLQNPRRQLPLALPVAMMLLTLL 342 Query: 211 LTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEAL 270 LT +R L ++ + + V L ++++ I R A Sbjct: 343 LTGSRGGWLATAGALGLFVLLRFRRWT-------VFLALGGLALLLAAPDAILTRLLSAF 395 Query: 271 NDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGAL 330 + + TS R+ ++ L + + A A+ + Sbjct: 396 S--------LADTSNQYRVNIWIGVLAMLREHWVLGVGAG------AEAFAKGYQAFMLS 441 Query: 331 EFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAY-----KKRALGLLILTL---GI 382 E H HN +E + G++G+ + ++ + + ++ + L + G+ Sbjct: 442 EARAAHAHNVPLEIFAEMGILGLIAAVWALLAALRRPFVVGADRQSSYILAAVPCALTGL 501 Query: 383 VGIGLSDVIIWARSIPIIII 402 + GL D + + I Sbjct: 502 LVHGLVDYVWYNPKILFAFW 521 >UniRef50_Q5LT75 O-antigen polymerase, putative n=1 Tax=Ruegeria pomeroyi RepID=Q5LT75_SILPO Length = 465 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 47/347 (13%), Positives = 107/347 (30%), Gaps = 27/347 (7%) Query: 80 LIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTL 139 + LL IW + + +Y + + + + + V+ Sbjct: 107 MFTLLFAIWLCVSYLASDWRAYSYDHTKGFLQTLLLVPILGLTVTAPRHLRRMVLVIAAS 166 Query: 140 YSLSFLIAGYAMYINS-------------IHENDRISFGVGTATGAAYSTMLIGIVSGVA 186 ++S + R + A M + ++ + Sbjct: 167 GAISAVFVILETVFGLRLLPYADEGDVAAWLGAVRSAGASAYNPTTASHLMAVSLMLALV 226 Query: 187 ILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVL 246 + + L++L S L L + R+ + LI + + + F + + Sbjct: 227 MALHDRRGRRLWVLISLLCLVALPMMGARSG--AIAVAMGIGLIGFRMRHHRLFPAVALA 284 Query: 247 LIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSF 306 + L V+ + R+ + L + SL RL+ +IGL+++ ++P + Sbjct: 285 AVGALVFAVLNAPDTLVERFGVLGDFLG--EGDTADRSLLRRLSYNQIGLSLWAENPVTG 342 Query: 307 RSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYI 366 + + ++ R E LHN +E G++GI L S + Sbjct: 343 LGPGAYPVN---YASDAFRWYPGREAEARQLHNAYLEVAVETGIVGIALFLGALLSAAWA 399 Query: 367 A-------YKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIV 406 A + + L + + + + + I I A + Sbjct: 400 ALKAGLHPVSEVQVLAQALGVAMAVFMFASLFMPNEDIKYTWILAAL 446 >UniRef50_A6T1Z8 Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1Z8_JANMA Length = 571 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 60/417 (14%), Positives = 131/417 (31%), Gaps = 24/417 (5%) Query: 14 TLKSSMILEIITYILCFFSMIIAFVDN--TFSIKIYNITAIVCLLSLILRGRQENYNIKN 71 L ILCF +I V+ +F + I L+ + Q + + Sbjct: 6 KHDERRYLTYFGAILCFAYLIPLHVNPYPSFYNEWTAALGIFVLIFGFMHRNQFPMRLPS 65 Query: 72 LILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSF---------IVFL 122 + I + + I A + L I I + + Sbjct: 66 IAFLPLIIAVMIGVQIMAGLTTFPWDGALAIGYCLLAGVAILIGATITAEDRGAERLCAA 125 Query: 123 TLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTML--IG 180 L + SV+ L+ + + + + +D + +L +G Sbjct: 126 IAWPHLIAAGFSVVIATMQLAGVEHIFVPFAMLMAHSDAVIRPHANIAQTNQLALLFCMG 185 Query: 181 IVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKF 240 I S + + P + ++++ L+LTQ+R ++ P+ + I Y K Sbjct: 186 IASVWWLFQNDRVRPLFAIFLLASLIWGLSLTQSRIAWMILPVFSMLVFIWRYKPGFKPI 245 Query: 241 TSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFI 300 SI+ L + I + ++ + + ARL + + + Sbjct: 246 PLSIIFGFLSLYFLFAFALPEISILFGSQVDSPAARASGGYS----ARLVLLQQAWEMSR 301 Query: 301 KSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKG-LMGIFSTLFL 359 P+ + ++ A H HN ++ + G L +++ Sbjct: 302 THPWFGVGWYEFGPQQIAMASQFEPGTYAR-----HSHNIVLNFAAEFGWLFTFILMVWV 356 Query: 360 YFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNN 416 + L + KK + L + IGL V+ + ++ LL+ + +++ Sbjct: 357 IWWLKALINKKINSQTCLFFLFAMAIGLHSVVEFPLWYA-YVLFPFCLLIGMVHQDR 412 >UniRef50_C8VYR5 O-antigen polymerase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VYR5_DESAS Length = 540 Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 55/416 (13%), Positives = 134/416 (32%), Gaps = 41/416 (9%) Query: 18 SMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLS 77 ++ I + + ++ + ++ + + + + ++ G + +++LP+ Sbjct: 126 MAVVFAIPESGLYLAALLLPFTSFNNLALLGVLTALAYSARVIAGGKVELCRSSILLPVL 185 Query: 78 IFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGS------FIVFLTLTSQLKSK 131 IF L+ S ++ + Y + + + I ++ L + Sbjct: 186 IFFAVLVYGTVTSVLPRSSAYEFSIYVAAVIYLFLIINMIDNKQKLSLLLGCLALSAAAV 245 Query: 132 KESVLYTLYSLSFLIAGYAMYINSIHEND---RISFGVGTATGAA-YSTMLIGIVSGVAI 187 +Y Y + + +++ D R S A Y ++I I + + Sbjct: 246 AADAIYDYYFGVTFVDLHKGWVDPELNPDIKNRASAVFENPNLLAQYFVLVIPITASLIA 305 Query: 188 LYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLL 247 + + + FL L +C L LT +R L F + + + L Sbjct: 306 VVKRIGYKFLLLAIACLAGTALVLTYSRGGLYGFVFAMAVLAMI-------RGPKFLPLF 358 Query: 248 IAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFR 307 A + +R A + + +S+ R +++ L + + Sbjct: 359 FAAAVIGAFFLPHTVIDRLATA--------DNLNDSSVVYRFDIWKSTLMMIKDYWLTGV 410 Query: 308 SAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIA 367 + A V N H HN ++ S G+ G+ + L L + ++ Sbjct: 411 GVGTEAFMRVYYVYMMNSA------IMPHAHNLYLQLLSETGIFGLAAFLLLMYKIYQTV 464 Query: 368 YKKR----------ALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINN 413 ++ G+ G + L D +W + ++ I + +V+ Sbjct: 465 FRLVSSKLSYIKWLNAGIAGAMAGFLLQSLFDYGLWYYKLGVLFWILIGVYIVLEK 520 >UniRef50_C6JNS2 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JNS2_FUSVA Length = 401 Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 50/409 (12%), Positives = 137/409 (33%), Gaps = 34/409 (8%) Query: 17 SSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPL 76 + +E++ + +I AF+++ ++K+ + + +L L+ + N N + + Sbjct: 6 KKIKIELLGEYTSYLYIISAFINSKLNMKLGYLLVGLGILKLLFWREKVNINKRVYGMFS 65 Query: 77 SIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVL 136 +F++G++ S + F VFL+ +LK Sbjct: 66 FLFVLGIIS-------NFIVSKSNGINVFINENGRFFYAAFLFVFLSGKDKLKKID---- 114 Query: 137 YTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPF 196 +L ++ + + + ++I + + K+ + Sbjct: 115 -ISINLGVILLCIGILMKNEWVMKGSYSRQRGILIIGIVYIMINFLECIL----KEKYTN 169 Query: 197 LFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVI 256 ++ LY + +R + + + + LI ++ ++ + + Sbjct: 170 FYVFPLVLSLYSIVELDSRMAVFVILLCLMLYLIFIIFFRKGYKIKRLLAVLILGGVLGY 229 Query: 257 IFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRA--- 313 N + + + + ++ S R+ M++ G++IF ++ Sbjct: 230 NLLP------NSFIEKVKTSFHTSNNVSNEDRIVMWKAGIHIFKENYLLGIGTSEEDVKP 283 Query: 314 ----ESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYK 369 + E R + LH+ ++ G++G+ L+ + Y Y+ Sbjct: 284 LLIEYVDKNIEKEVLRNEFIRDRKFSRLHSMYVDFFVQNGIIGLLYIGLLFIIIPYEFYR 343 Query: 370 KRA----LGLLILTLGIVGIGLSDVIIW-ARSIPIIIISAIVLLLVINN 413 + L +G G++ + SI + + L+L++ N Sbjct: 344 SKKGRIETALFFSIIGFYIYGITWSVWSDYGSIQALFQIVLALMLIVGN 392 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.318 0.138 0.327 Lambda K H 0.267 0.0421 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,784,432,522 Number of Sequences: 3077464 Number of extensions: 60245750 Number of successful extensions: 687872 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2119 Number of HSP's successfully gapped in prelim test: 15436 Number of HSP's that attempted gapping in prelim test: 642491 Number of HSP's gapped (non-prelim): 48191 length of query: 419 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 288 effective length of database: 637,248,572 effective search space: 183527588736 effective search space used: 183527588736 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 94 (40.8 bits)