Phyre 2 alignment of P0ABY7 with d1d5ya1

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Job Description | P0ABY7
Confidence | 36.10% | Date | Thu Jan 5 11:16:42 GMT 2012
Rank | 47 | Aligned Residues | 24
% Identity | 17% | Template | d1d5ya1
SCOP info | DNA/RNA-binding 3-helical bundle | Homeodomain-like | AraC type transcriptional activator
Resolution | 2.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | L | E | S | E | T | Q | L | S | R | G | R | L | I | K | L | Y | K | E | L | R | G | S | P | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | V | A | A | K | A | G | Y | S | K | W | H | L | Q | R | M | F | K | D | V | T | G | H | A | I
Template Known Secondary structure |  |  |  | T | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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