Phyre 2 alignment of P0ABY7 with c3rfaA_

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Job Description | P0ABY7
Confidence | 44.50% | Date | Thu Jan 5 11:16:42 GMT 2012
Rank | 34 | Aligned Residues | 30
% Identity | 23% | Template | c3rfaA_
PDB info | PDB header:oxidoreductase | Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; | PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine
Resolution | 2.05 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | S | F | A | C | S | L | C | Q | P | P | S | R | A | V | K | R | R | K | L | S | Q | N | P | A | D | I | I | P | Q | L | L | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | A | L | E | C | K | F | C | S | T | A | . | Q | Q | G | F | N | R | N | L | R | . | . | V | S | E | I | I | G | Q | V | W | R
Template Known Secondary structure |  |  | S | S |  |  | T | T |  | G | G | G | . | T | T |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 125 | . | . | . | . | 130 | . | . | . | . | . |  | . | . | . | . | 140 | . | . | . | . |  |  | . | . | . | . | . | 150 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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