10/01/2012 07:45:30 : INFO  : Run start: Tue Jan 10 07:45:29 GMT 2012
10/01/2012 07:45:37 : INFO  : Initialised job
10/01/2012 07:45:40 : INFO  : Renaming log file 'phyre2_20120110_074528.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/7d2e382eb99dba87/phyre_20120110_074528.log'
10/01/2012 07:45:41 : INFO  : Initialised job:
Sequence
>batch____
MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFS
TDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQCPQAEEGPLLALTRA
WTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSQNPADII
PQLLDEQRVQAV

10/01/2012 07:45:42 : INFO  : Checked sequence
10/01/2012 07:45:46 : INFO  : Finding homologues with PSI-BLAST
10/01/2012 07:45:48 : INFO  : PSI-BLAST 3 iterations
10/01/2012 07:46:58 : INFO  : PSI-BLAST 5 iterations
10/01/2012 07:47:59 : INFO  : Finished PSI-BLAST
10/01/2012 07:48:02 : INFO  : Running Buildali to generate a3m file
10/01/2012 07:50:47 : INFO  : Converting to HMM
10/01/2012 07:50:50 : INFO  : Calibrating HMM
10/01/2012 07:51:03 : INFO  : Searching HMM database
10/01/2012 07:54:45 : INFO  : Finished buildali
10/01/2012 07:54:47 : INFO  : Predicting secondary structure
10/01/2012 07:54:58 : INFO  : Predicted secondary structure (PSI-Pred)
10/01/2012 07:55:00 : INFO  : Predicting Disordered regions
10/01/2012 07:55:05 : INFO  : Predicted Disorder (Disopred)
10/01/2012 07:55:07 : INFO  : Running memsat_svm check
10/01/2012 08:00:32 : INFO  : Globular protein
10/01/2012 08:00:34 : INFO  : Predicted Transmembrane (memsat_svm) ID '7d2e382eb99dba87'
10/01/2012 08:00:36 : INFO  : Initialising fold library search
10/01/2012 08:00:40 : INFO  : Initialised search input
10/01/2012 08:00:43 : INFO  : Building Ensemble models
10/01/2012 08:00:48 : INFO  : Building hh.d2avue1.model.1.pdb
10/01/2012 08:01:07 : INFO  : Building hh.c2avuF_.model.2.pdb
10/01/2012 08:01:24 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/7d2e382eb99dba87/hh.c2avuF_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/7d2e382eb99dba87/c2avuF_.2.pdb
10/01/2012 08:01:29 : INFO  : Building hh.c3iz6X_.model.3.pdb
10/01/2012 08:01:46 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/7d2e382eb99dba87/hh.c3iz6X_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/7d2e382eb99dba87/c3iz6X_.21.pdb
10/01/2012 08:01:52 : INFO  : Building hh.d1qxfa_.model.4.pdb
10/01/2012 08:02:06 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/7d2e382eb99dba87/hh.d1qxfa_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/7d2e382eb99dba87/d1qxfa_.24.pdb
10/01/2012 08:02:11 : INFO  : Building d2avue1.1.pdb
10/01/2012 08:02:29 : INFO  : Building c2avuF_.2.pdb
10/01/2012 08:02:47 : INFO  : Building c1ee8A_.3.pdb
10/01/2012 08:03:06 : INFO  : Building c1k82D_.4.pdb
10/01/2012 08:03:26 : INFO  : Building c1zgwA_.5.pdb
10/01/2012 08:03:44 : INFO  : Building c1nnjA_.6.pdb
10/01/2012 08:04:04 : INFO  : Building c2opfA_.7.pdb
10/01/2012 08:04:23 : INFO  : Building d1ee8a3.8.pdb
10/01/2012 08:04:41 : INFO  : Building c2f5qA_.9.pdb
10/01/2012 08:05:01 : INFO  : Building d1tdza3.10.pdb
10/01/2012 08:05:20 : INFO  : Building d1r2za3.11.pdb
10/01/2012 08:05:39 : INFO  : Building d1k82a3.12.pdb
10/01/2012 08:05:57 : INFO  : Building d1l1ta3.13.pdb
10/01/2012 08:06:16 : INFO  : Building d1k3xa3.14.pdb
10/01/2012 08:06:35 : INFO  : Building c3eg9B_.15.pdb
10/01/2012 08:06:53 : INFO  : Building c3eh2B_.16.pdb
10/01/2012 08:07:11 : INFO  : Building c3a46B_.17.pdb
10/01/2012 08:07:30 : INFO  : Building c1pd0A_.18.pdb
10/01/2012 08:07:48 : INFO  : Building c1m2vB_.19.pdb
10/01/2012 08:08:06 : INFO  : Building c2hr5B_.20.pdb
10/01/2012 08:09:42 : INFO  : Finished HH model building
10/01/2012 08:09:44 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
10/01/2012 08:10:50 : INFO  : html domain output complete ID '7d2e382eb99dba87'
10/01/2012 08:15:40 : INFO  : Run end  : Tue Jan 10 08:15:38 GMT 2012
