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    Reference sequence (query): batch____
    Identities normalised by aligned length.
    Colored by: property

    HSP processing: ranked
    Search cycle: 3

                                                                                                 1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         . ] 192
       batch____                                       bits   E-value  N 100.0%  1:192             MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQCPQAEEGPLLALTRAWTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSQNPADIIPQLLDEQRVQAV
     1 UniRef50_O52222 Flagellar transcriptional a...   271     1e-71  1  93.8%  1:192   1:192     MSEKSIVQEARDIQLAMELINLGARLQMLESETQLSRGRLIRLYKELRGSPPPKGMLPFSTDWFMTWEQNIHASMFCNAWQFLLKTGLCSGVDAVIKAYRLYLEQCPQPPEGPLLALTRAWTLVRFVESGLLELSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSRDAADIIPQLLDEQIEQAV
     2 UniRef50_C9XV32 Flagellar transcriptional a...   267     1e-70  1  89.1%  1:192   1:193     MTDKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFSTDWFMTWEQNIHASMFCNAWQYLLRTGLCSGVDAVIKAYRLYLEQCPQENdgPLLALTRAWTLVRFVDSGMLELSRCNSCGGNFVTHAHQPVGSFACSLCQPPSRAVKRRKLSRDAADIIPQLLDEQVEQAV
     3 UniRef50_O85807 Flagellar transcriptional a...   265     5e-70  1  83.3%  1:192   2:194     MVEKSIVQEAKDIQLAMELISLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFSTDWFMTWEQNIHSSMFYNAYLFLMKSGQCSGVEAVIKAYRLYLEQCPQqgEAPLLALTRAWTLVRFVDSGMLQLSACSCCGGAFITHAHQPLNGFICSLCQPPSRAVKRRKLSPQLADIIPQLLDEQVKRAI
     4 UniRef50_Q9X9F3 Flagellar transcriptional a...   259     3e-68  1  78.6%  1:192   1:194     MVEKSIVQEAKDIQLAMELITLGARLQMLESETQLSRGRLIRLYKELRGSPPPKGMLPFSTDWFMTWEQNIHSSMFYNAYRFLLKSGHCEGVEVVVKAYRLYLEQCPpnGDAPILALTRAWTLVRFVDSGMLQPTECRCCGGTFITHAHQPVNSFVCSLCQPPSRAVKKRKLSPQPADTNSQLLDGFAQKAM
     5 UniRef50_A9ACW3 Flagellar transcriptional a...   241     1e-62  1  60.8%  1:171  15:185     MASKSVVIEVKEITLAIELIELGARLQLLEAETSLSRDRLIKLYKELKGVSPPKGMLPFSTDWFMTWQPNIHSSLFYNIYRFMQDHGRCEPIHAIVKAYRLYLEHVSLSGDEAALSLTRAWTLVRFFDSGMLQMTPCTRCGGHFVAHAHDPQQGFVCGLCQPPSRAGKTRK---------------------
     6 UniRef50_Q1LMQ4 Flagellar transcriptional a...   226     3e-58  1  47.1%  2:188   3:190     -TRKSVLREVEEFRLAVELVELGARLQVLESEVAISRDRLTRLYKELRGVSPPKGQLPSSPEWFLTWRPNVHASLFLSAYRFLMAQGKQSRIRCIVSAYRLYVEHISLIGEDLTLSFTRAWTMLRFLDSGTLVSSTCKCCGGSFVRHKYDLQTNFVCGLCAPPPRAAKGKKLATSAEpvVPEDLQQTI----
     7 UniRef50_Q2NX28 Flagellar transcriptional a...   220     2e-56  1  61.8%  1:178   1:179     MYRKSIMQESRDIQLAMELIALGARLPILENETCLSRSRLLRLYKEVKGTPAPKGLLPFSADWFLSWEQNIHSSAFYNAYLCLIRVGNIPTIEAMIKAYRLYLELCPQRQdgPLLGLTRAWILLRFIDSQLLGQTRCKLCGGAFITYAFHPPHNFVCSFCHPPSRAVKKRKLSHAAAD--------------
     8 UniRef50_Q0AI30 Flagellar transcriptional a...   218     1e-55  1  50.3%  1:171   1:171     MKVKSILSEGKQIQLATELVRLGARLQVLEVSTTLSRERLVKLYKEVKGVSPPKGMLPYSEDWFTGWQPNMHSSLFINIYNYITQYTNVRDIDAIIKSYQLYLEHIEVNHLQCILSFTRAWTLVRFVESKVLSVTSCVKCTGNFLVHSLDIQSNHVCGLCHVPSRAGKTKR---------------------
     9 UniRef50_Q0K2R3 Flagellar transcriptional a...   217     2e-55  1  50.6%  3:176  27:200     --GKSMLQDVEQIRLAIEMIGLGARLQVLESEVSLPRVRLIRLYKELCGVSPPKGMLPFSTDWFVSWRPNAHASMLLGAYRFMTSRGSLDGIRAVLSSYRMYREQLCATGEASQLSFTRAWTLVRFYERGMLRLARCRDCRGEYVVQADDARHRYVCGLCLPPARAGKGRKPAPAA----------------
    10 UniRef50_B2TE01 Flagellar transcriptional a...   207     1e-52  1  52.1%  1:165   1:165     MLKRSLTEDAQEVFRAIALIELGARMQVLESELTLSRDRMIRLYREVKGVSPPKGMLPFSADWYMTWLANIHASLFYNTYLFLKNEARCSHLDALTKGYRLYLEHCQHSETEPVLDLTRAWTLVRFFDADILQLTKCCRCTGKFVAHKHDLQHNVVCGACQPPSR---------------------------
    11 UniRef50_Q46TH1 Flagellar transcriptional a...   201     1e-50  1  53.1%  2:161   9:168     -PARSALQDASDTQLAIELIGLGARPQVVEAEVTLSRSRVYRLYRELTGGSPPKGMLPFSADWFVTWRPNAHASYLLSVHEYMQQRAGLPGIRAVLNSYRVYAEHMKANNEECLISFTRFWTLVRFCEGGLLQLSTCPCCGGRFVTHAHEPLASFICTLCQ-------------------------------
    12 UniRef50_A1W669 Putative uncharacterized pr...   152     5e-36  1  25.3%  1:178   1:182     MPGTKISQRMRALQLARDCAALGARIRTIHHLTGLRPRELLHLLFNSHAM-PPCGRAPNSREWYHRAnqRIEASIVIANFRRMRHLGF-PAPEALVGAYRYYQSMYR---PPPRISFDRAFDLAAHTeaPNFRLASCSRCDSEFltFAGADTSARPCPFCQLLDRHARDPRLTASFAE--------------
    13 UniRef50_C6BQC6 Flagellar transcriptional a...   146     5e-34  1  24.6%  1:171   1:172     MKNTQLRFYIEHERRLKRLCEFGARPKTMQALLTPHGGVHIATFRelTGRTPKPGMSPSPdsFFQKPNRRFDCSLILHSYNKLCYLGA-HHVDALIEAYAFFRESTP-PEKSMEFSFERALMLARAFDSGELRLTECECCSSNHVHERNEPV---MCPVCNNGNFGGSRKR---------------------
    14 UniRef50_A9ARR3 Putative uncharacterized pr...   146     5e-34  1  20.7%  7:170 225:394     ------LPRDRNETYASALMAYGCRASTAASLFRLNQNAMRQRFFEMHGTSSPCGNTPNSLSWFvtPTNRLHGTIFTWLYRAALAA-GANAPQALIATNDVYQQIFGGQH---AISVDRGCNLTRAMAADnlTIAPCRSCRTEYLVSNNETkhSFDCPACtpKRRGTKAR----------------------
    15 UniRef50_C1MEH2 Transcriptional activator n...   145     6e-34  1  22.2%  3:160   2:166     --KAALVRDEDKFALTQKMVKLGFRRKIIVHSLNASDRVIDFLRKEFHLSDVSIGRLKHSETLLNTTHKKVEATNFMSIYLRRSKDPNNsnIVDVVSAFEIYRElrPEEASKVMIDANEAWTLARDFRAEEIRMVRCFRCDLSFIssCDRPRKKHICPFC--------------------------------
    16 UniRef50_B2UCN2 Putative uncharacterized pr...   145     9e-34  1  24.8%  7:171 221:390     ------VGRAQMERYTEALIGLRCRASSVASMFPGTAATARALYRQIHGESSPCGLMPSSSSWYvsVSSRIQSTTLIWLYWSALA-ARANEPEAFITALDTVGRLF---GDAARLTPDRAFHLARSVSTgdLSMSSCRTCSTHYLTCNTTPkaSFYCPSCttAPRKGKPRK---------------------
    17 UniRef50_Q8L260 Transcriptional activator n...   144     2e-33  1  14.1%  7:162   4:163     ------IPKDEVDYLLKRMVALGFRKAIITTSLNAAERLVDTLKRNCNQEDNGRGRLKVATSFLSMKQDTIESTNFMTIYLRIAKDpkVSDIRDIITAFEIFQNlrPRNSSDMIIDANAAWILARDYRTEEIKMVTCTHCNNHYI-SPYDEKPKHKCPFCDN------------------------------
    18 UniRef50_A3GZH1 Transcriptional activator n...   142     4e-33  1  25.2%  7:161   5:164     ------LSKSELFTRASLLIKYGFRTTIIALDTGLPIHIIRRLHKEVTGKSPCPGQLPESDAIVKSRRALVEGSLLMALYVNIGGDNVYknIDALMKAYDAYLVARKEADLPAEIpiNEGWVLARDLRSQLASLHRCR-CGSLYLTVSQQRI-QLKCPVCE-------------------------------
    19 UniRef50_Q47DP0 Putative uncharacterized pr...   136     5e-31  1  24.3%  8:176   7:179     -------RHLRAMQLAKQLAALGARLKTIHLITGIPPRQVQSLFFP-DARTIPRGRAPDSAEWYHGAnlRTDACLIGARYCQLRNQGLATG-EALVFAYRAYQAATL---PPYRISLDRAFNLVSYIdaPALSVLTCPGCGCEFIAAVGTVAhgEPCPFCKLLERFHLDHRIQASY----------------
    20 UniRef50_C4NV70 Putative uncharacterized pr...   132     7e-30  1  19.7% 15:171  14:180     --------------TARHMALAGYITKIIMIETGLTYKQVRRLYQDLegYTLERKSRTfgATLIHSHTSKIQASLLMQLYFNIGGEAVLrnIKALNKAFRMYHAIRKEV-PGMkfDITDAWCLASELRSGDAMLEVCDNCKCTYFTSVNQRTC-VECPFCKEQGRHGGGEK---------------------
    21 UniRef50_Q11ZG5 Putative uncharacterized pr...   130     2e-29  1  20.3% 11:182  19:192     ----------EQITSIRELVSFRARPATIAQLVPHQYAEmrRIY-ETSDLRPPGGTQPSCKQVVLMYRSLTYRSNLNALYTQFSDL-RCAGvsALVVVYRLYRRKAGFgdEKQLISFDHWYVVALEIETRESRLHRCGACGSRNLLTKHISVTSIDCVFCDLLATA--NRKATSKADPMVPR----------
    22 UniRef50_A1WPA9 Putative uncharacterized pr...   125     6e-28  1  21.7%  9:160   6:178     --------DLQLYETAKVMAKMQARACVISRITGLSIADTRKIWHDEMGRSSPSGQQPNDDQWFlsPLRRMHGALILQLYARAQK--AMPPHAAFTHAYYHYARLtrQSEDDYVIPFLRAHFLTLLYTDenLQTRRCKSCGTLYLGHVEEV--SSKCPIC--------------------------------
    23 UniRef50_D2TXU7 Putative uncharacterized pr...   125     9e-28  1  20.5% 15:160   7:168     --------------LAVEMIKLGFRKAIILSEIPSLSSSAFDCLKNEAGLS-GNgrLKKVNRVFVDDNLKKHGSLFLYVYLIMASNPKNknIEELVSAYSSYRehCNSYNDTLkiDANMAWQIATAYRSDVIDLVGCFYCRNkyLTCNADTVCNMKCAFC--------------------------------
    24 UniRef50_A1VVD0 Putative uncharacterized pr...   120     3e-26  1  17.9% 16:160  14:179     ---------------AVYMARMLARNPIIVHALGLTKREGETIWKKTNNRSSPSGQFPSNHDWYltTDRRFQGALFILMYQKA--LTAMPRELALPHTYYHFSNITAGEWKGPklPYSRAFNLIAGYHNEqlVVKCCKGCLGKYLARFDE--GGSKCPLC--------------------------------
    25 UniRef50_Q5NV35 Putative uncharacterized pr...   115     8e-25  1  18.7% 22:171 237:391     ---------------------FGCRAKSVSSLFNTSLEVARDAYRRIHGRSSPSGQPPSSLTWFitPPRRVQSTFQMWLFRSAIARE-VSTPESFVAAIDI---NRTFFADDCKVPPERSMHLARSMasEELAVWPCRKCGTPYLASNseLLHSFTCPCCntATRGGNRRR---------------------
    26 UniRef50_Q120F9 Putative uncharacterized pr...   115     1e-24  1  17.0% 19:171  39:207     ------------------LIRLTQRTQLIKDLTGTDIraAIDKRLEEMgrPRGSGQTYTAKGFLSKMADKYDAAYLLGLHFGANGPGSLATFdaLDKRMETYLRYCseRQEDASISFETYIVLIEGIKNHEVPMHTCKDCSTSYVWPVGSYV-RHSCPVCAVHQHDVKAAK---------------------
    27 UniRef50_B7XGS9 Putative uncharacterized pr...    96     7e-19  1  17.5% 16:141 196:326     ---------------ATELLQQKLQPKLVAQWTGLNADEVVrlLRDIPLVQSQSgqAPNKT----LAESPLHSLLYLTIYRLLADNprRTNARAVVAAHREYVELCRAVGIEamISPSNGYQLSNAMKTGDITLTPCSKCK---------------------------------------------------
       consensus/100%                                                                              ............................h...h......h..hh..........t...............h.t......a..h...........h..........h........hs....h.h...htt.......C..C....................................................
       consensus/90%                                                                               ...............h..hhththR.thl...h.h..t.h.thhhp..t.....G....s.thh......hpus.hh.ha..h.t.....t.tsh.tshtha.t.h........ls.pphh.lht.hpst.h....C..Cts.al....t......CshC................................
       consensus/80%                                                                               ..............hs.thhthshRhphltt.hths.tthhplhpchpu.ssspG.hP.stphhhphp.phcuohhhtha..h.t.s.hts.culhtuachY.p.h...t.t.hlshscua.Lsp.hcst.lthttCttCtstalht.tp...th.CshC............................
       consensus/70%                                                                               ........c.p..thAhphlthGsRhphltp.hslsttphhcLa+-hpGhssPpG.hP.ussaahshptphcuohhhshYhhhht.sthsshcAllpAYchYhcht...tps.hlshsRAasLschhcut.lphspCppCsspalspstp.htshhCshCp...h.............

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