BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (201 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q21M56 50S ribosomal protein L4 n=42 Tax=Bacteria RepID... 285 6e-76 UniRef50_C5BQ62 50S ribosomal protein L4 n=266 Tax=Gammaproteoba... 285 7e-76 UniRef50_B0U0Y8 50S ribosomal protein L4 n=35 Tax=Gammaproteobac... 244 1e-63 UniRef50_Q8D211 50S ribosomal protein L4 n=2 Tax=Gammaproteobact... 229 4e-59 UniRef50_Q1H4N6 50S ribosomal protein L4 n=174 Tax=Proteobacteri... 228 1e-58 UniRef50_Q12GX0 50S ribosomal protein L4 n=18 Tax=Proteobacteria... 211 1e-53 UniRef50_Q7VQE7 50S ribosomal protein L4 n=7 Tax=Gammaproteobact... 207 2e-52 UniRef50_Q605B3 50S ribosomal protein L4 n=3 Tax=Gammaproteobact... 204 2e-51 UniRef50_B4SKW4 50S ribosomal protein L4 n=13 Tax=Xanthomonadace... 194 2e-48 UniRef50_B7J468 50S ribosomal protein L4 n=4 Tax=cellular organi... 174 1e-42 UniRef50_C1KZH9 50S ribosomal protein L4 n=21 Tax=Bacteria RepID... 168 1e-40 UniRef50_B0RZU1 50S ribosomal protein L4 n=32 Tax=Bacteria RepID... 166 4e-40 UniRef50_A9NED4 50S ribosomal protein L4 n=11 Tax=Bacteria RepID... 163 4e-39 UniRef50_C1TLI0 LSU ribosomal protein L4P n=1 Tax=Dethiosulfovib... 159 5e-38 UniRef50_C9M934 Ribosomal protein L4/L1 family protein n=2 Tax=S... 155 6e-37 UniRef50_D1CFC7 Ribosomal protein L4/L1e n=2 Tax=Bacteria RepID=... 154 1e-36 UniRef50_B5YG46 50S ribosomal protein L4 n=1 Tax=Thermodesulfovi... 151 1e-35 UniRef50_A5FRZ0 50S ribosomal protein L4 n=5 Tax=Dehalococcoides... 151 1e-35 UniRef50_Q03ZP4 50S ribosomal protein L4 n=19 Tax=Firmicutes Rep... 150 2e-35 UniRef50_Q02W25 50S ribosomal protein L4 n=145 Tax=Bacteria RepI... 149 6e-35 UniRef50_Q034Y4 50S ribosomal protein L4 n=209 Tax=Bacteria RepI... 147 2e-34 UniRef50_C8W7Z8 Ribosomal protein L4/L1e n=7 Tax=Coriobacteriace... 144 1e-33 UniRef50_A3DJH3 50S ribosomal protein L4 n=16 Tax=Clostridiales ... 144 2e-33 UniRef50_B9XFN0 Ribosomal protein L4/L1e n=1 Tax=bacterium Ellin... 143 3e-33 UniRef50_D1AWK4 Ribosomal protein L4/L1e n=7 Tax=Fusobacteriacea... 143 4e-33 UniRef50_P51313 50S ribosomal protein L4, chloroplastic n=3 Tax=... 142 5e-33 UniRef50_Q110A8 50S ribosomal protein L4 n=17 Tax=Cyanobacteria ... 142 9e-33 UniRef50_Q2LQA0 50S ribosomal protein L4 n=12 Tax=Bacteria RepID... 140 2e-32 UniRef50_B8I7Y0 50S ribosomal protein L4 n=33 Tax=Firmicutes Rep... 140 3e-32 UniRef50_C6C186 50S ribosomal protein L4 n=6 Tax=Bacteria RepID=... 138 9e-32 UniRef50_C1F641 50S ribosomal protein L4 n=1 Tax=Acidobacterium ... 138 1e-31 UniRef50_P10135 50S ribosomal protein L4 n=9 Tax=Bacteria RepID=... 137 2e-31 UniRef50_B2KEM0 Ribosomal protein L4/L1e n=1 Tax=Elusimicrobium ... 135 6e-31 UniRef50_Q30Z43 50S ribosomal protein L4 n=8 Tax=Bacteria RepID=... 135 1e-30 UniRef50_C0QVZ7 50S ribosomal protein L4 n=3 Tax=Brachyspira Rep... 134 2e-30 UniRef50_D1NBS4 Ribosomal protein L4/L1e n=1 Tax=Victivallis vad... 133 3e-30 UniRef50_C1A6Q6 50S ribosomal protein L4 n=1 Tax=Gemmatimonas au... 131 1e-29 UniRef50_B2V7L2 Ribosomal protein L4/L1e n=4 Tax=Hydrogenotherma... 131 1e-29 UniRef50_A6DPN5 50S ribosomal protein L4 n=1 Tax=Lentisphaera ar... 131 1e-29 UniRef50_B1ZNE7 Ribosomal protein L4/L1e n=3 Tax=Verrucomicrobia... 131 1e-29 UniRef50_C6HWF6 Ribosomal protein L4 n=1 Tax=Leptospirillum ferr... 131 1e-29 UniRef50_B2UMT9 Ribosomal protein L4/L1e n=2 Tax=Verrucomicrobia... 130 2e-29 UniRef50_C1SPI5 Ribosomal protein L4 n=1 Tax=Denitrovibrio aceti... 130 2e-29 UniRef50_A0L5X4 50S ribosomal protein L4 n=1 Tax=Magnetococcus s... 130 3e-29 UniRef50_P49546 50S ribosomal protein L4, chloroplastic n=3 Tax=... 129 4e-29 UniRef50_Q6B8V4 50S ribosomal protein L4, chloroplastic n=1 Tax=... 129 5e-29 UniRef50_Q39Y05 50S ribosomal protein L4 n=11 Tax=Desulfuromonad... 128 9e-29 UniRef50_Q1Q137 Strongly similar to 50S ribosomal protein L4 n=1... 128 9e-29 UniRef50_D2SHA2 Ribosomal protein L4/L1e n=2 Tax=Actinobacteria ... 125 6e-28 UniRef50_B1GZ84 50S ribosomal protein L4 n=1 Tax=uncultured Term... 125 8e-28 UniRef50_Q1ISC1 50S ribosomal protein L4 n=2 Tax=Acidobacteria R... 125 1e-27 UniRef50_A5IM84 50S ribosomal protein L4 n=51 Tax=Bacteria RepID... 125 1e-27 UniRef50_C1Z9D6 LSU ribosomal protein L4P n=1 Tax=Planctomyces l... 124 2e-27 UniRef50_Q1D774 50S ribosomal protein L4 n=3 Tax=Myxococcales Re... 124 2e-27 UniRef50_A4FPM4 50S ribosomal protein L4 n=49 Tax=Actinobacteria... 123 4e-27 UniRef50_C5JB89 50S ribosomal protein L4 n=1 Tax=uncultured bact... 123 4e-27 UniRef50_B3EUM2 50S ribosomal protein L4 n=71 Tax=cellular organ... 123 4e-27 UniRef50_D1J751 Chloroplast 50S ribosomal protein L4 n=2 Tax=Pha... 122 5e-27 UniRef50_D0J9J1 50S ribosomal subunit protein L4 n=2 Tax=Blattab... 122 6e-27 UniRef50_A3EVS0 Ribosomal protein L4 n=2 Tax=Leptospirillum sp. ... 122 6e-27 UniRef50_Q8VY61 50S ribosomal protein L4 n=18 Tax=Magnoliophyta ... 122 6e-27 UniRef50_UPI0001C30EB8 ribosomal protein L4/L1e n=1 Tax=Conexiba... 122 7e-27 UniRef50_A9UV13 Predicted protein n=1 Tax=Monosiga brevicollis R... 122 7e-27 UniRef50_B6WX21 Putative uncharacterized protein n=1 Tax=Desulfo... 122 7e-27 UniRef50_B5JYE1 Ribosomal protein L4/L1 family (Fragment) n=1 Ta... 121 1e-26 UniRef50_Q2JFH5 50S ribosomal protein L4 n=91 Tax=Actinobacterid... 121 1e-26 UniRef50_C0Q9X2 50S ribosomal protein L4 n=1 Tax=Desulfobacteriu... 120 3e-26 UniRef50_Q0EW37 50S ribosomal protein L4 n=1 Tax=Mariprofundus f... 119 7e-26 UniRef50_UPI0000D54D0B 50S ribosomal protein L4 n=1 Tax=Psychrof... 118 1e-25 UniRef50_Q2S3R3 50S ribosomal protein L4 n=2 Tax=Rhodothermaceae... 117 2e-25 UniRef50_C4XG14 Putative uncharacterized protein n=2 Tax=Mycopla... 116 5e-25 UniRef50_Q2JV82 50S ribosomal protein L4 n=17 Tax=Cyanobacteria ... 115 7e-25 UniRef50_Q4JT48 50S ribosomal protein L4 n=7 Tax=Actinomycetales... 115 8e-25 UniRef50_B8IYH3 50S ribosomal protein L4 n=6 Tax=Desulfovibriona... 115 9e-25 UniRef50_B4CUX4 Ribosomal protein L4/L1e n=1 Tax=Chthoniobacter ... 115 1e-24 UniRef50_C7PU72 Ribosomal protein L4/L1e n=11 Tax=Bacteroidetes ... 114 1e-24 UniRef50_A5IYY5 50S ribosomal protein L4 n=1 Tax=Mycoplasma agal... 113 3e-24 UniRef50_Q7UN19 50S ribosomal protein L4 n=1 Tax=Rhodopirellula ... 113 4e-24 UniRef50_C1E7J4 Predicted protein n=2 Tax=Micromonas RepID=C1E7J... 113 5e-24 UniRef50_Q6KI54 50S ribosomal protein L4 n=1 Tax=Mycoplasma mobi... 112 5e-24 UniRef50_A7RJ96 Predicted protein n=2 Tax=Metazoa RepID=A7RJ96_N... 112 5e-24 UniRef50_A8Z669 50S ribosomal subunit protein L4 n=3 Tax=Candida... 112 7e-24 UniRef50_C9RR33 Ribosomal protein L4/L1e n=1 Tax=Fibrobacter suc... 111 1e-23 UniRef50_A9BCP6 50S ribosomal protein L4 n=25 Tax=cellular organ... 111 2e-23 UniRef50_B7T1Y3 Ribosomal protein L4 n=1 Tax=Vaucheria litorea R... 110 3e-23 UniRef50_Q1CRU2 50S ribosomal protein L4 n=81 Tax=Epsilonproteob... 110 3e-23 UniRef50_Q84U22 Plastid ribosomal protein L4 n=1 Tax=Chlamydomon... 110 4e-23 UniRef50_C7MFF5 LSU ribosomal protein L4P n=1 Tax=Brachybacteriu... 109 4e-23 UniRef50_Q6UCS1 Ribosomal protein L4 n=1 Tax=uncultured marine a... 108 8e-23 UniRef50_D0MYG7 50S ribosomal protein L4 n=1 Tax=Phytophthora in... 108 8e-23 UniRef50_D2R5T8 Ribosomal protein L4/L1e n=4 Tax=Planctomycetace... 108 1e-22 UniRef50_Q4A5C2 50S ribosomal protein L4 n=1 Tax=Mycoplasma syno... 108 1e-22 UniRef50_B2XTF4 50S ribosomal protein L4 n=2 Tax=Heterosigma aka... 108 1e-22 UniRef50_Q9TLT3 50S ribosomal protein L4, chloroplastic n=1 Tax=... 108 1e-22 UniRef50_A4S817 Plastid ribosomal protein L4 large ribosomal sub... 107 3e-22 UniRef50_Q8KTP1 Ribosomal protein L4 n=1 Tax=Candidatus Tremblay... 106 4e-22 UniRef50_Q2GL58 50S ribosomal protein L4 n=15 Tax=Rickettsiales ... 106 5e-22 UniRef50_A5CCL1 50S ribosomal protein L4 n=18 Tax=cellular organ... 105 6e-22 UniRef50_Q85FW2 50S ribosomal protein L4, chloroplastic n=1 Tax=... 105 8e-22 UniRef50_A9T3B9 Predicted protein n=3 Tax=Embryophyta RepID=A9T3... 105 9e-22 UniRef50_Q83FY7 50S ribosomal protein L4 n=7 Tax=Micrococcineae ... 105 1e-21 UniRef50_B2S2D7 50S ribosomal protein L4 n=25 Tax=Spirochaetacea... 105 1e-21 UniRef50_B8KWG3 Ribosomal protein L4/L1e n=1 Tax=gamma proteobac... 104 1e-21 UniRef50_Q8GM59 50S ribosomal protein L4 n=3 Tax=Mycoplasma RepI... 104 2e-21 UniRef50_O46895 50S ribosomal protein L4, chloroplastic n=1 Tax=... 104 2e-21 UniRef50_B3QY25 50S ribosomal protein L4 n=15 Tax=Bacteroidetes/... 104 2e-21 UniRef50_A5USI8 LSU ribosomal protein L4P n=8 Tax=Chloroflexi Re... 103 2e-21 UniRef50_D0LIC4 Ribosomal protein L4/L1e n=1 Tax=Haliangium ochr... 103 2e-21 UniRef50_B3E0I5 50S ribosomal protein L4 n=1 Tax=Methylacidiphil... 103 3e-21 UniRef50_Q4EE76 Ribosomal protein L4/L1 family n=1 Tax=Listeria ... 102 5e-21 UniRef50_A8IAS4 Ribosomal protein L4/L1e n=4 Tax=Alphaproteobact... 102 5e-21 UniRef50_A5KRQ2 Ribosomal protein L4/L1e n=1 Tax=candidate divis... 102 8e-21 UniRef50_Q8EUB4 50S ribosomal protein L4 n=1 Tax=Mycoplasma pene... 102 9e-21 UniRef50_B5Y986 Ribosomal protein L4/L1 family n=1 Tax=Coprother... 101 1e-20 UniRef50_A6GCH8 50S ribosomal protein L4 n=1 Tax=Plesiocystis pa... 101 2e-20 UniRef50_Q601L4 50S ribosomal protein L4 n=6 Tax=Mycoplasma RepI... 101 2e-20 UniRef50_B0VI30 50S ribosomal protein L4 n=1 Tax=Candidatus Cloa... 100 3e-20 UniRef50_Q6ME62 Putative 50S ribosomal protein L4 n=3 Tax=Parach... 99 8e-20 UniRef50_P61061 50S ribosomal protein L4 n=1 Tax=Bdellovibrio ba... 99 1e-19 UniRef50_D2IS95 Ribosomal protein L4 n=1 Tax=Cryptomonas paramec... 99 1e-19 UniRef50_C6XLG6 Ribosomal protein L4/L1e n=7 Tax=Alphaproteobact... 98 2e-19 UniRef50_B0CPN7 Predicted protein n=2 Tax=Agaricales RepID=B0CPN... 96 5e-19 UniRef50_Q7XYP3 Ribosomal protein rpL4 (Fragment) n=1 Tax=Bigelo... 96 5e-19 UniRef50_A5FZW4 50S ribosomal protein L4 n=180 Tax=Alphaproteoba... 96 6e-19 UniRef50_B1AIM1 50S ribosomal protein L4 n=15 Tax=Mycoplasmatace... 96 1e-18 UniRef50_P75579 50S ribosomal protein L4 n=2 Tax=Mycoplasma RepI... 96 1e-18 UniRef50_Q252V4 50S ribosomal protein L4 n=15 Tax=Chlamydiaceae ... 94 3e-18 UniRef50_Q0FQD6 50S ribosomal protein L4 (Fragment) n=1 Tax=Rose... 94 4e-18 UniRef50_Q1IX73 50S ribosomal protein L4 n=10 Tax=Bacteria RepID... 93 4e-18 UniRef50_Q1AU30 50S ribosomal protein L4 n=1 Tax=Rubrobacter xyl... 93 5e-18 UniRef50_Q2GED8 50S ribosomal protein L4 n=2 Tax=Neorickettsia R... 93 5e-18 UniRef50_A8J5Z5 Mitochondrial ribosomal protein L4 (Fragment) n=... 93 6e-18 UniRef50_Q04PT9 50S ribosomal protein L4 n=23 Tax=Leptospira Rep... 92 1e-17 UniRef50_UPI0001509D48 ribosomal protein L4/L1 family protein n=... 92 1e-17 UniRef50_Q00YX6 50S ribosomal protein L4 (ISS) n=2 Tax=Ostreococ... 91 2e-17 UniRef50_B4KI26 GI14673 n=2 Tax=Drosophila RepID=B4KI26_DROMO 91 3e-17 UniRef50_B8BX09 RM4, ribosomal protein 4 (Fragment) n=1 Tax=Thal... 89 7e-17 UniRef50_Q54RB5 Putative uncharacterized protein n=1 Tax=Dictyos... 89 7e-17 UniRef50_B4JAB3 GH11428 n=2 Tax=Coelomata RepID=B4JAB3_DROGR 89 8e-17 UniRef50_Q4PHH8 Putative uncharacterized protein n=1 Tax=Ustilag... 89 9e-17 UniRef50_O74801 60S ribosomal protein yml6, mitochondrial n=1 Ta... 89 1e-16 UniRef50_Q075M8 Plastid 50S ribosomal protein L4 family (Fragmen... 89 1e-16 UniRef50_O50061 50S ribosomal protein L4, chloroplastic n=23 Tax... 88 1e-16 UniRef50_C6XHJ0 50S ribosomal protein L4 n=2 Tax=Rhizobiaceae Re... 88 1e-16 UniRef50_B2WIG6 50S ribosomal protein L4 n=5 Tax=Leotiomyceta Re... 87 4e-16 UniRef50_C8N6G3 50S ribosomal protein L4 n=1 Tax=Cardiobacterium... 86 8e-16 UniRef50_Q0INA7 Os12g0488600 protein n=1 Tax=Oryza sativa Japoni... 86 9e-16 UniRef50_Q9BYD3 39S ribosomal protein L4, mitochondrial n=28 Tax... 84 2e-15 UniRef50_Q9V3D0 Mitochondrial ribosomal protein L4 n=14 Tax=Endo... 84 3e-15 UniRef50_Q4FLL9 50S ribosomal protein L4 n=3 Tax=Candidatus Pela... 83 5e-15 UniRef50_D2VLH2 Ribosomal protein L4/L1e n=1 Tax=Naegleria grube... 82 8e-15 UniRef50_B4U745 50S ribosomal protein L4 n=4 Tax=Aquificaceae Re... 82 9e-15 UniRef50_C8V2I4 50S ribosomal protein L4 (AFU_orthologue; AFUA_5... 80 3e-14 UniRef50_C7Z3X5 Predicted protein n=3 Tax=Sordariomycetes RepID=... 80 4e-14 UniRef50_A2R423 Contig An14c0190, complete genome n=6 Tax=Tricho... 79 1e-13 UniRef50_Q7RXV7 60S ribosomal protein L4, mitochondrial n=5 Tax=... 78 2e-13 UniRef50_A8QA96 Putative uncharacterized protein n=1 Tax=Malasse... 78 2e-13 UniRef50_B6K4T6 50S ribosomal protein L4 n=1 Tax=Schizosaccharom... 75 1e-12 UniRef50_B8LSS3 50S ribosomal protein L4 n=6 Tax=Eurotiomycetida... 75 1e-12 UniRef50_UPI00017927E1 PREDICTED: similar to GA19152-PA n=1 Tax=... 75 1e-12 UniRef50_B6HLY3 Pc21g08410 protein n=3 Tax=mitosporic Trichocoma... 75 2e-12 UniRef50_C1BS34 Mitochondrial 39S ribosomal protein L4 n=1 Tax=L... 71 3e-11 UniRef50_D0RNM6 Ribosomal protein, L4/L1 family n=1 Tax=alpha pr... 70 5e-11 UniRef50_Q05FI6 Ribosomal protein L4 n=4 Tax=Candidatus Carsonel... 69 1e-10 UniRef50_UPI000186E58D mitochondrial 50S ribosomal protein L4, p... 69 1e-10 UniRef50_Q8IB54 Mitochondrial ribosomal protein L4, putative n=1... 67 3e-10 UniRef50_B7P338 Ribosomal protein L4, putative (Fragment) n=1 Ta... 67 5e-10 UniRef50_UPI000180C8CE PREDICTED: similar to mitochondrial ribos... 65 1e-09 UniRef50_C1FJ75 Predicted protein (Fragment) n=2 Tax=Micromonas ... 64 4e-09 UniRef50_Q4UI83 Putative uncharacterized protein n=1 Tax=Theiler... 60 3e-08 UniRef50_O17005 Putative uncharacterized protein n=2 Tax=Caenorh... 60 4e-08 UniRef50_B7FXM9 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 60 5e-08 UniRef50_B6KDX9 50S ribosomal protein L4, putative n=3 Tax=Toxop... 59 1e-07 UniRef50_A8Q8Q6 Ribosomal protein L4/L1 family protein n=1 Tax=B... 57 3e-07 UniRef50_Q06RI4 23S ribosomal protein L4 n=1 Tax=Brucella ceti R... 57 3e-07 UniRef50_Q5KM69 Ribosomal protein L4, putative n=2 Tax=Filobasid... 55 1e-06 UniRef50_C5KH52 Putative uncharacterized protein n=1 Tax=Perkins... 54 3e-06 UniRef50_Q7YN80 Ribosomal protein L4 n=1 Tax=Eimeria tenella Rep... 54 4e-06 UniRef50_A0CQM2 Chromosome undetermined scaffold_24, whole genom... 53 8e-06 UniRef50_C4PXU3 50S ribosomal protein L4, putative n=1 Tax=Schis... 52 1e-05 UniRef50_P51998 54S ribosomal protein YmL6, mitochondrial n=12 T... 48 2e-04 UniRef50_Q6BKF7 DEHA2F22330p n=4 Tax=Saccharomycetales RepID=Q6B... 45 0.001 UniRef50_UPI0001BCDE73 50S ribosomal protein L4 n=1 Tax=Campylob... 44 0.005 UniRef50_Q6C573 YALI0E20493p n=1 Tax=Yarrowia lipolytica RepID=Q... 42 0.013 UniRef50_D2MKV5 Ribosomal protein L4/L1e n=1 Tax=Candidatus Pori... 40 0.055 UniRef50_UPI0001923E1E PREDICTED: hypothetical protein n=2 Tax=H... 39 0.086 UniRef50_D1ZWQ9 Whole genome shotgun sequence assembly, contig_1... 39 0.096 >UniRef50_Q21M56 50S ribosomal protein L4 n=42 Tax=Bacteria RepID=RL4_SACD2 Length = 204 Score = 285 bits (729), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 137/203 (67%), Positives = 167/203 (82%), Gaps = 3/203 (1%) Query: 1 MELVLKDAQSA---LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGK 57 MEL + Q A ++VSE FGR+FN+ LVHQ VVA+ AGARQGT+AQK RA V+G GK Sbjct: 1 MELSIATPQGAKGTVSVSEAAFGREFNQDLVHQAVVAFMAGARQGTKAQKNRAAVSGGGK 60 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 KPWRQKGTGRAR+G+I+SP+WRSGGVTFAA P+DHSQK+NKKMYR A++ ILSEL RQ+R Sbjct: 61 KPWRQKGTGRARAGTIRSPLWRSGGVTFAAEPRDHSQKLNKKMYRAAIRCILSELARQER 120 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 L+VVE+F ++APKTK L QKL L DVLII ++ ENL+LAARNLHKVDVRD G+DP Sbjct: 121 LVVVEEFDLDAPKTKDLVQKLAQFDLADVLIIGEDVSENLYLAARNLHKVDVRDVNGLDP 180 Query: 178 VSLIAFDKVVMTADAVKQVEEML 200 VSLI FDKVV+T A+K++EE+L Sbjct: 181 VSLIRFDKVVVTVAALKKLEEVL 203 >UniRef50_C5BQ62 50S ribosomal protein L4 n=266 Tax=Gammaproteobacteria RepID=RL4_TERTT Length = 204 Score = 285 bits (729), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 136/204 (66%), Positives = 167/204 (81%), Gaps = 3/204 (1%) Query: 1 MELVLKDAQSA---LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGK 57 MEL + Q A + VSE FG++FN+ LVHQ VVAY AG+RQGT+AQK RA V+G GK Sbjct: 1 MELSIVTPQGAKGTVAVSEVAFGKEFNQDLVHQAVVAYMAGSRQGTKAQKNRAAVSGGGK 60 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 KPWRQKGTGRAR+G+I+SPIWRSGGVTFAA+P+D QK+NKKMYR AL+ ILSEL RQ+R Sbjct: 61 KPWRQKGTGRARAGTIRSPIWRSGGVTFAAQPRDFEQKLNKKMYRAALRCILSELARQER 120 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 L+VVE+F ++APKTK+L QKL + L D LI++ ++ ENL+LAARNLHKVDVRD IDP Sbjct: 121 LVVVEEFDLDAPKTKILVQKLAEYDLTDALIVSEQVSENLYLAARNLHKVDVRDVQAIDP 180 Query: 178 VSLIAFDKVVMTADAVKQVEEMLA 201 VSLI F+KVVMT AVK++EE+LA Sbjct: 181 VSLIRFEKVVMTVSAVKKLEEVLA 204 >UniRef50_B0U0Y8 50S ribosomal protein L4 n=35 Tax=Gammaproteobacteria RepID=RL4_FRAP2 Length = 207 Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 6/206 (2%) Query: 1 MELVLKDAQSA----LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L +K A + V+E F D+NE+L+HQVVVAY AGARQGT+AQKTR+EV+G G Sbjct: 1 MDLNIKSLAGAEAGVVGVAEGVFAADYNESLIHQVVVAYMAGARQGTKAQKTRSEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KPWRQKGTGRAR+G+I+SPI+R GGVTFAA+P+ + QKVN+KMY GA+KSILSELVR D Sbjct: 61 AKPWRQKGTGRARAGTIRSPIFRKGGVTFAAKPKSYKQKVNRKMYSGAVKSILSELVRSD 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITG--ELDENLFLAARNLHKVDVRDATG 174 R+ VVE +E PKTK + + ++DVL + G E +ENL+L++RNL V V D+ Sbjct: 121 RMTVVESLRLETPKTKEFKVIVDSLGVKDVLFVVGVEEFNENLYLSSRNLKNVAVCDSVE 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEML 200 I+PVSL+ F+ VV T A+K++EE L Sbjct: 181 INPVSLVCFENVVFTKQAIKEIEEKL 206 >UniRef50_Q8D211 50S ribosomal protein L4 n=2 Tax=Gammaproteobacteria RepID=RL4_WIGBR Length = 201 Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 117/201 (58%), Positives = 158/201 (78%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 MEL+ D++ + +SE FG+ FNE+LVHQVV +Y RQGT AQK+R+EV GSGKKPW Sbjct: 1 MELLCIDSKEKVKISEKIFGQKFNESLVHQVVRSYRITKRQGTSAQKSRSEVIGSGKKPW 60 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTGRAR+GS+KSPIWRSGGVTFA + +D K+NKKMY+ ALKSI SEL RQ+R+++ Sbjct: 61 RQKGTGRARAGSVKSPIWRSGGVTFAKKTRDFKHKINKKMYKNALKSIFSELCRQNRILI 120 Query: 121 VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 V+ F V++ KTKLL +KL +M LE+VLII+ +D+NL L++RNL+KV V I+P++L Sbjct: 121 VKNFFVKSEKTKLLKKKLNEMNLENVLIISKTIDKNLVLSSRNLNKVHVCFPININPINL 180 Query: 181 IAFDKVVMTADAVKQVEEMLA 201 I+F K ++T DA+K +EE+L Sbjct: 181 ISFKKTIITIDAIKIIEEILT 201 >UniRef50_Q1H4N6 50S ribosomal protein L4 n=174 Tax=Proteobacteria RepID=RL4_METFK Length = 208 Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 119/208 (57%), Positives = 151/208 (72%), Gaps = 7/208 (3%) Query: 1 MELVLKD-----AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS 55 ME+ L D A++ L VSE TFGR+FNEALVHQVVVAY A AR TRAQ TRAEV+ + Sbjct: 1 MEIKLIDKNGRPAKAGLAVSEATFGREFNEALVHQVVVAYQANARTATRAQLTRAEVSHT 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVR 114 KKPW QKGTGRAR+G S IWR GG F P ++ S K+N+K YR ++SILSELVR Sbjct: 61 TKKPWNQKGTGRARAGMSSSTIWRGGGRAFPNTPDENFSHKINRKAYRAGVRSILSELVR 120 Query: 115 QDRLIVVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDAT 173 QDRL VE+F+V+ PKTK L +K+K + E +L++ + DENL+L+ARNL V V +A Sbjct: 121 QDRLSAVEEFAVDTPKTKQLVEKIKGLGYNEGLLVLVDKFDENLYLSARNLPHVLVLEAQ 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEMLA 201 +DPVSL+ F +V+ TA AVK++EEMLA Sbjct: 181 YVDPVSLVRFPQVLATAGAVKKLEEMLA 208 >UniRef50_Q12GX0 50S ribosomal protein L4 n=18 Tax=Proteobacteria RepID=RL4_POLSJ Length = 206 Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 103/195 (52%), Positives = 140/195 (71%), Gaps = 1/195 (0%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 A S + V +T FGR++NE+L+HQVVVA+ A ARQGTRAQK R +V S KKP++QKGTGR Sbjct: 12 ASSKVDVPDTVFGREYNESLIHQVVVAFQANARQGTRAQKDREQVRHSTKKPFKQKGTGR 71 Query: 68 ARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 AR+G SP+WR GG F P ++ +QK+NKKMYR + SI S+L R+ RL VV+ +V Sbjct: 72 ARAGMTSSPLWRGGGRIFPNMPDENFTQKINKKMYRAGMASIFSQLAREGRLAVVDSLAV 131 Query: 127 EAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 ++PKTK+LA K K M L VL+I +DENL+LA+RNL + V + DPVSL+ + KV Sbjct: 132 DSPKTKVLADKFKAMNLNSVLVIADVVDENLYLASRNLVNILVVEPRYADPVSLVHYKKV 191 Query: 187 VMTADAVKQVEEMLA 201 ++T A+ Q++EM A Sbjct: 192 LVTKAAMDQLKEMFA 206 >UniRef50_Q7VQE7 50S ribosomal protein L4 n=7 Tax=Gammaproteobacteria RepID=RL4_BLOFL Length = 212 Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 103/192 (53%), Positives = 145/192 (75%), Gaps = 2/192 (1%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 ++VS+ FG FN AL+HQ+V +Y RQG+++QK+R++V+GS KKPWRQKGTGRARSG Sbjct: 21 VSVSDKVFGYPFNPALIHQIVSSYLINCRQGSKSQKSRSDVSGSNKKPWRQKGTGRARSG 80 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 S+KSPIWRSGGVTFA++P+ + QK+NKKMY+GA+KSILS+LV +RL ++E +E PKT Sbjct: 81 SVKSPIWRSGGVTFASKPKKYDQKINKKMYKGAMKSILSKLVCDNRLFLIEDLFLEKPKT 140 Query: 132 KLLAQKLKDMALE-DVLIITGE-LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 LL +KLK++ + VLI+T +D+NL LA+ NLH V + + IDPVSLI F+ ++ Sbjct: 141 NLLLKKLKNITSDRSVLIVTDNVIDKNLILASSNLHTVKIYNLNSIDPVSLINFNITLLF 200 Query: 190 ADAVKQVEEMLA 201 V+ +E L+ Sbjct: 201 RTIVESLELRLS 212 >UniRef50_Q605B3 50S ribosomal protein L4 n=3 Tax=Gammaproteobacteria RepID=RL4_METCA Length = 205 Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 95/190 (50%), Positives = 139/190 (73%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 L VS+ FG+ FNE+LVHQ+VV Y A AR GT+AQK+R++V+G GKKPW+QKG+G AR+G Sbjct: 16 LEVSDKVFGQGFNESLVHQLVVGYLAAARSGTKAQKSRSDVSGGGKKPWKQKGSGHARAG 75 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 + +SP+WR+GGVTFAA +++ QK+NKKMYR A++SI SEL+RQ RL+V + +PKT Sbjct: 76 TTRSPLWRTGGVTFAASNRNYRQKLNKKMYRAAVRSIFSELLRQGRLVVSDGIVPTSPKT 135 Query: 132 KLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTAD 191 + LA KLK +I+ +LD NL L++RNL V + A + PV L+ ++V+ T+ Sbjct: 136 RELAAKLKSFGEGYTVILAEQLDLNLALSSRNLPNVSINTADTLSPVDLVHAERVIATSS 195 Query: 192 AVKQVEEMLA 201 A++++E L+ Sbjct: 196 AIRKLEVRLS 205 >UniRef50_B4SKW4 50S ribosomal protein L4 n=13 Tax=Xanthomonadaceae RepID=RL4_STRM5 Length = 201 Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 108/202 (53%), Positives = 141/202 (69%), Gaps = 2/202 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 MELV+ + + ++VS+ FGRDF+E LVHQVVVAY R GT+AQKTR+EV K Sbjct: 1 MELVITGSNNKVSVSDAVFGRDFSEDLVHQVVVAYRNAGRAGTKAQKTRSEV-AGTTKKS 59 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 +++ G AR G++ +PI+ GGVTFAA+P+ QKVN+K YR A+ +ILSEL RQ RL + Sbjct: 60 KKQKGGGARHGALTAPIFVGGGVTFAAKPRSFEQKVNRKQYRAAMCAILSELNRQGRLTI 119 Query: 121 VEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 VE F VE TK L KL + + + LI+T E E+L+L+ARNL V VRD G+DPVS Sbjct: 120 VESFDVEVTNTKGLIAKLAGLEVGKRPLIVTEEASEHLYLSARNLPYVQVRDVQGLDPVS 179 Query: 180 LIAFDKVVMTADAVKQVEEMLA 201 L+ D VV+TADAVK+VEE LA Sbjct: 180 LVGADTVVITADAVKKVEEWLA 201 >UniRef50_B7J468 50S ribosomal protein L4 n=4 Tax=cellular organisms RepID=RL4_ACIF2 Length = 205 Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 80/192 (41%), Positives = 125/192 (65%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 S + +++ FG +NEAL+HQVVVA AG R QK RA V G G+KPW+QKGTGRAR Sbjct: 14 SEIEIADGVFGVPYNEALLHQVVVAQMAGMRSANAVQKNRAAVRGGGRKPWKQKGTGRAR 73 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 +GSI+SPIWR GG F ++++QKVNKKM+ GA++++L+EL+RQ RL ++++ P Sbjct: 74 AGSIRSPIWRGGGRAFPGGNENYTQKVNKKMWAGAMRTVLAELLRQGRLQIIQQEDFGEP 133 Query: 130 KTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 +++L L ++VL++ GE+ NLFL RN +V + + P L+ + +V++ Sbjct: 134 RSRLGRDWLSRAGGDNVLLVMGEVPLNLFLGLRNFPRVGIAGWQDVGPADLLQYGRVLLD 193 Query: 190 ADAVKQVEEMLA 201 +A ++ E+ Sbjct: 194 VEAAARLGEVYG 205 >UniRef50_C1KZH9 50S ribosomal protein L4 n=21 Tax=Bacteria RepID=RL4_LISMC Length = 207 Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 90/205 (43%), Positives = 139/205 (67%), Gaps = 5/205 (2%) Query: 1 MELVLKDAQSA--LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKK 58 + L+ +D +A +T+++T FG + NE +V V+++ A RQGT K R+EV G G+K Sbjct: 4 LSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRK 63 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRL 118 PWRQKGTGRAR GSI+SP WR GGV F P+ ++ K+ KK+ R A+KSILS V +++L Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKL 123 Query: 119 IVVEKFSVEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGID 176 +V+E + +APKTK A LK+++++ ++++ GE EN+ L+ARNL + V A I Sbjct: 124 VVLEGLTFDAPKTKEFAAFLKNISVDTKALIVVAGE-SENVELSARNLQGITVIPAESIS 182 Query: 177 PVSLIAFDKVVMTADAVKQVEEMLA 201 + + DK+++T AV++VEE+LA Sbjct: 183 VLEVAKHDKLIITKAAVEKVEEVLA 207 >UniRef50_B0RZU1 50S ribosomal protein L4 n=32 Tax=Bacteria RepID=RL4_FINM2 Length = 207 Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 84/190 (44%), Positives = 129/190 (67%), Gaps = 1/190 (0%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 L ++E FG D NE +V++VV A RQGT++ KTR+EV G G+KPWRQKGTGRAR G Sbjct: 17 LELNEAIFGVDVNEHVVYEVVKNQLANKRQGTQSAKTRSEVRGGGRKPWRQKGTGRARQG 76 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 SI+SP WR GGV FA +P+D+S V KK+ R A+KS+L+E V + +IV++K +++A T Sbjct: 77 SIRSPQWRGGGVVFAPKPRDYSYAVPKKVRRLAIKSVLTEKVNDNEMIVLDKLNLDAIST 136 Query: 132 KLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 K + LK++ A + L++ + D+ L+ + RN+ V + +A I+ + ++ +V+T Sbjct: 137 KKAVEVLKNIKADKKALVVIDKNDDTLYRSFRNIENVAICEAKLINVYDCLKYNSLVITT 196 Query: 191 DAVKQVEEML 200 DAVK +EE+ Sbjct: 197 DAVKILEEVF 206 >UniRef50_A9NED4 50S ribosomal protein L4 n=11 Tax=Bacteria RepID=RL4_ACHLI Length = 207 Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 85/192 (44%), Positives = 124/192 (64%), Gaps = 1/192 (0%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 S + +++ FG N+ +++ VV A A RQGT KTRAEV G GKKPWRQKGTGRAR Sbjct: 15 SEVALNDAIFGITPNQQVLYDVVNAQRAALRQGTAKTKTRAEVRGGGKKPWRQKGTGRAR 74 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 GSI+SP WR GG+ F P+ ++ KVN+K+ + ALKS LS V + L++V+ +V P Sbjct: 75 QGSIRSPQWRGGGIVFGPIPRSYAVKVNQKVKQLALKSALSYHVLAENLVLVDNITVAEP 134 Query: 130 KTKLLAQKLKDMALED-VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 KTKL + + ++ L+D +++ +D+NL LA+ NL VR+ + + L+ F +VV+ Sbjct: 135 KTKLFIEIMNNLKLDDRSIVLVDSVDKNLLLASNNLPGAVVREVSQVSVYELLKFKQVVL 194 Query: 189 TADAVKQVEEML 200 T AVK EE+L Sbjct: 195 TQGAVKYYEEVL 206 >UniRef50_C1TLI0 LSU ribosomal protein L4P n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLI0_9BACT Length = 206 Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 82/198 (41%), Positives = 119/198 (60%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + ++ L++S F + +HQVVVA A RQGT K R +V G GKKPWRQK Sbjct: 9 ITGESTGELSLSGNVFDVPLHVPAMHQVVVAQLANRRQGTHCTKGRGDVRGGGKKPWRQK 68 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 TGRAR GS +SPIW GGVT +P+++ QKVNKK+ R A+ S LS+ +R +L+ E Sbjct: 69 HTGRARHGSSRSPIWVGGGVTHGPKPRNYRQKVNKKVRRLAICSALSQKIRDAQLMGFEA 128 Query: 124 FSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 FS+E P TK++ + + +E L+I DEN+ ++ RN+ DV I+ L+ Sbjct: 129 FSMEKPSTKIMKGLFQSLGVEKPLVIVDHRDENISMSTRNIPGADVLHVDSINVYDLLKH 188 Query: 184 DKVVMTADAVKQVEEMLA 201 V ++A AVK++EE+ A Sbjct: 189 GHVFISAGAVKKLEEVYA 206 >UniRef50_C9M934 Ribosomal protein L4/L1 family protein n=2 Tax=Synergistaceae RepID=C9M934_9BACT Length = 207 Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 83/190 (43%), Positives = 115/190 (60%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 L +S+ FG F+ + +HQVVVA A ARQGT K R EV G G+KPWRQK TGRAR+G Sbjct: 17 LELSDAVFGVPFHSSAIHQVVVAQQANARQGTACAKDRGEVRGGGRKPWRQKHTGRARAG 76 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 SI+SP+W GGV +P+D+ KVNKK+ A++S LS + RL VE FS+EAP T Sbjct: 77 SIRSPLWAGGGVVHGPKPRDYFLKVNKKVRALAMRSALSVRAGESRLFAVEGFSLEAPST 136 Query: 132 KLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTAD 191 K + L + LI+ +EN+ +A N+ V V I+ + L+ D +V T Sbjct: 137 KKMLSFLAAVGARKPLIVLDSRNENVIRSAANIQGVKVLHMDSINVLDLVRHDGLVATTA 196 Query: 192 AVKQVEEMLA 201 +K++EE+ A Sbjct: 197 VLKRLEEVYA 206 >UniRef50_D1CFC7 Ribosomal protein L4/L1e n=2 Tax=Bacteria RepID=D1CFC7_THET1 Length = 223 Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 84/196 (42%), Positives = 121/196 (61%), Gaps = 2/196 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 D S L VS+ FG N A++HQ +V A AR GT +TRAEV+G G+KPWRQKGTG Sbjct: 11 DIVSQLEVSDLVFGIQPNLAVMHQALVRQLANARTGTHDTRTRAEVSGGGRKPWRQKGTG 70 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GSI++P WR GGV F P+ + Q++ +KM R AL+S LS+ V ++RL+VV S Sbjct: 71 RARQGSIRAPQWRGGGVVFGPHPRSYEQRMPRKMRRLALRSALSQKVAEERLLVVTGLSE 130 Query: 127 EAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 P+TK + L+ + L + VLI T +E++ A NL V V A+ ++ L+ +D Sbjct: 131 IEPRTKAMIAALEKLGLAGQKVLIATNGRNESVQKAGSNLPNVKVIHASNLNIADLLKYD 190 Query: 185 KVVMTADAVKQVEEML 200 + + AV ++E+L Sbjct: 191 YLFLEDGAVNSLQEIL 206 >UniRef50_B5YG46 50S ribosomal protein L4 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RL4_THEYD Length = 210 Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 79/195 (40%), Positives = 120/195 (61%), Gaps = 6/195 (3%) Query: 1 MELVLKDAQSALT----VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 +E+ ++D + + V + F +E++VH VVAY A RQGT KTR+EV+G G Sbjct: 2 IEIEIRDINNNIVGKKEVPDIVFNNSASESVVHTAVVAYMANQRQGTHCTKTRSEVSGGG 61 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPWRQK TGRAR GSI+SP+WR GG+ F +P+D+ ++ K+M AL L+ R + Sbjct: 62 KKPWRQKHTGRARHGSIRSPLWRKGGIVFGPKPRDYYIQLPKQMKDTALFKALTMKYRDN 121 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATG 174 +++++ S+ KTK + + LK++ LE+ VLI E DE + L+ARN+ + V A Sbjct: 122 EILLLDNLSLNRIKTKDMVEILKNLQLEESSVLIALPEKDEKVLLSARNIPYIGVVRAED 181 Query: 175 IDPVSLIAFDKVVMT 189 ++ + FDKVV T Sbjct: 182 LNAYHVAMFDKVVFT 196 >UniRef50_A5FRZ0 50S ribosomal protein L4 n=5 Tax=Dehalococcoides RepID=RL4_DEHSB Length = 210 Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 81/189 (42%), Positives = 117/189 (61%), Gaps = 1/189 (0%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + +SE FG FNEALVHQ VA A ARQGT++ KTR EV GS +K +RQKGTG AR G Sbjct: 16 INISEDVFGVPFNEALVHQAFVAQQANARQGTQSTKTRGEVQGSSRKIYRQKGTGNARMG 75 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 + +SP+ R GGV F RP+D S+ + KKM R A++ +LS + L V+++ S + PKT Sbjct: 76 TNRSPVRRHGGVAFGPRPRDFSKDLPKKMRRQAIRCVLSFKLESGELKVIDQLSFDEPKT 135 Query: 132 KLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 + +A+ L + + LI D N +ARN+ V A ++ ++ ++VMT Sbjct: 136 RDMAKILTALQVISPTLIAVDNPDTNFIKSARNIPAVKTTPANLLNISDMLKNKQLVMTE 195 Query: 191 DAVKQVEEM 199 +AV+QVEE+ Sbjct: 196 EAVRQVEEL 204 >UniRef50_Q03ZP4 50S ribosomal protein L4 n=19 Tax=Firmicutes RepID=RL4_LEUMM Length = 207 Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 124/191 (64%), Gaps = 1/191 (0%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + +++ F + N A++ V+ A RQGT A K R+ V+G G+KPW+QKGTGRAR+G Sbjct: 17 IELNDAVFAIEPNNAVITDAVLMQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRARAG 76 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 SI+ P +R GG+ F P+ ++ ++N+K Y+ ALKS+LS+ V ++L+VV+ S EAPKT Sbjct: 77 SIREPQFRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVADNKLVVVDALSFEAPKT 136 Query: 132 KLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 + + L +++ + L++ E +EN L+ARNL V V GI+ + ++ DK+V+ Sbjct: 137 QDFKKVLANLSADKKTLVVVDEDNENAILSARNLANVQVMTTKGINVLDVVNADKLVIVQ 196 Query: 191 DAVKQVEEMLA 201 ++++++ LA Sbjct: 197 SSIEEIQGGLA 207 >UniRef50_Q02W25 50S ribosomal protein L4 n=145 Tax=Bacteria RepID=RL4_LACLS Length = 208 Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 77/192 (40%), Positives = 121/192 (63%), Gaps = 2/192 (1%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 +T++++ FG + NE++V VV++ A RQGT A K R+ V+G GKKPWRQKGTGRAR G Sbjct: 17 VTLNDSVFGIEPNESVVFDVVISQRASLRQGTHAHKNRSAVSGGGKKPWRQKGTGRARQG 76 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 S +SP WR GG F P+ ++ K+ +K+ + ALKS+ S V +LI V+ APKT Sbjct: 77 STRSPQWRGGGTVFGPNPRSYAYKLPQKVRQLALKSVYSTKVADGKLIAVDTLDFAAPKT 136 Query: 132 KLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 A+ + +++E ++++ E +E L+ARNL V V A + +++ DK+++ Sbjct: 137 AEFAKVISALSIERKVLVVLPNEGNEFAELSARNLENVKVTTANSASVLDIVSADKLLVV 196 Query: 190 ADAVKQVEEMLA 201 A+ Q+EE+LA Sbjct: 197 QSALTQIEEVLA 208 >UniRef50_Q034Y4 50S ribosomal protein L4 n=209 Tax=Bacteria RepID=RL4_LACC3 Length = 207 Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/189 (41%), Positives = 120/189 (63%), Gaps = 1/189 (0%) Query: 14 VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSI 73 +++ + + NE +V VV RQGT A K R+ V+G G+KPWRQKGTGRAR GSI Sbjct: 19 LNDAIWAVEPNENVVFDAVVMQRDSLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSI 78 Query: 74 KSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKL 133 +SP WR GG+ F P+ ++ K+ KK+ R A+KS+LS+ V L+VV+ + +APKTK Sbjct: 79 RSPQWRGGGIVFGPTPRSYAYKLPKKVRRLAIKSVLSQKVLDSDLVVVDGLNFDAPKTKA 138 Query: 134 LAQKLKDMALED-VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADA 192 A L + + D L++ + +E AARNL V V A GI+ + ++ + K+++T A Sbjct: 139 FATVLDGLKVSDKALVVLEDGNEVAAKAARNLPNVKVVPAEGINVLDVVDYKKLILTQSA 198 Query: 193 VKQVEEMLA 201 ++++EE+LA Sbjct: 199 LQKIEEVLA 207 >UniRef50_C8W7Z8 Ribosomal protein L4/L1e n=7 Tax=Coriobacteriaceae RepID=C8W7Z8_ATOPD Length = 208 Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 78/190 (41%), Positives = 114/190 (60%), Gaps = 2/190 (1%) Query: 14 VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSI 73 +S +G + N +VHQVVV A ARQGT + K R EV+G G KP+RQKGTGRAR GSI Sbjct: 19 LSSDVYGIEPNIPVVHQVVVCQDASARQGTHSTKNRHEVSGGGVKPYRQKGTGRARQGSI 78 Query: 74 KSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKL 133 ++ W GGV F P+ H++++N KM + A++S+LS V L++V+ P TK Sbjct: 79 RAGQWTGGGVIFGPTPRSHARRINNKMVKLAMRSVLSGKVADSELVLVDSLEFAQPSTKQ 138 Query: 134 LAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTAD 191 L+++ +E V +I + D N +L+ RNL KV + + + LI +VM+AD Sbjct: 139 AKAALQNLGIEGKRVTVIVPDDDVNTYLSFRNLPKVSIFGVSEVTTRFLIDNGALVMSAD 198 Query: 192 AVKQVEEMLA 201 KQ+ E+LA Sbjct: 199 VAKQLGEVLA 208 >UniRef50_A3DJH3 50S ribosomal protein L4 n=16 Tax=Clostridiales RepID=RL4_CLOTH Length = 208 Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 74/192 (38%), Positives = 119/192 (61%), Gaps = 2/192 (1%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + + FG + N+ +HQV+V A RQGT++ KT++EV G G+KPWRQKGTGRAR G Sbjct: 17 INLRDDIFGIEVNKHAIHQVIVNQLANRRQGTQSTKTKSEVRGGGRKPWRQKGTGRARHG 76 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 SI+S W GG+ +P+ + V KK+ R ALKS LS V ++ L+V++ + + KT Sbjct: 77 SIRSAQWVKGGIALGPKPRSYKYAVPKKLRRLALKSALSSKVNENELLVLDSLNFDEIKT 136 Query: 132 KLLAQKLKDMALEDV--LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 K +A LK++ + D +++ + + N+ L+ARN+ + ++ +I DK ++T Sbjct: 137 KQMANVLKNLKVNDTTAVLVLADKNRNVELSARNIPGLKTLFVNTMNVYDIIRHDKFIIT 196 Query: 190 ADAVKQVEEMLA 201 DAV +VEE+ A Sbjct: 197 KDAVAKVEEVYA 208 >UniRef50_B9XFN0 Ribosomal protein L4/L1e n=1 Tax=bacterium Ellin514 RepID=B9XFN0_9BACT Length = 208 Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 1/175 (0%) Query: 28 VHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAA 87 VH VVAY A R GT KT EV GS KKPW+QKGTGRAR+GS++SP+WR GGV F Sbjct: 32 VHDAVVAYRAAQRSGTACAKTVGEVAGSNKKPWKQKGTGRARAGSVRSPLWRGGGVVFGP 91 Query: 88 RPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDV- 146 RP+D S+K+++ + A + L+E + ++VV+ F + + KTK L + +E Sbjct: 92 RPRDFSKKISRSTKQLAFRKALTERLNAGDVLVVDNFKLASAKTKEFVGVLTALKVEGTA 151 Query: 147 LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 L++ LD NL A+RN+ KV+V + ++ ++ DK+V T A ++VEE L Sbjct: 152 LVVADALDANLSRASRNVAKVEVATSDSVNTYQILRSDKLVFTRSAFEKVEERLG 206 >UniRef50_D1AWK4 Ribosomal protein L4/L1e n=7 Tax=Fusobacteriaceae RepID=D1AWK4_STRM9 Length = 214 Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 75/195 (38%), Positives = 125/195 (64%), Gaps = 6/195 (3%) Query: 13 TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGS 72 TVS FG + N+ ++H+V+ A A +R GT + KTR EV+G G+KP+RQKGTGRAR GS Sbjct: 20 TVSSEIFGLEPNKYVMHEVLTAELAASRAGTASTKTRGEVSGGGRKPFRQKGTGRARQGS 79 Query: 73 IKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTK 132 ++P GGV +P+++ +KVNKK+ + ALKS L+ ++ +IV+E + ++ PKTK Sbjct: 80 TRAPHMVGGGVVHGPKPRNYDKKVNKKVRKLALKSALAVRIQNGDVIVLEDYMLDTPKTK 139 Query: 133 L---LAQKLKDMALEDVLIITGELDE---NLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 +K+ + + + I+ L++ NL+L+ RN+ K ++ D + +L+ F+KV Sbjct: 140 AFVNFTEKVNMVEDKKLFIVNDYLEDADWNLYLSVRNIEKTEILDPRELSVYALLKFNKV 199 Query: 187 VMTADAVKQVEEMLA 201 V+T +A+ +EE+L Sbjct: 200 VITKEALATIEEVLG 214 >UniRef50_P51313 50S ribosomal protein L4, chloroplastic n=3 Tax=Eukaryota RepID=RK4_PORPU Length = 214 Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 74/184 (40%), Positives = 120/184 (65%), Gaps = 7/184 (3%) Query: 21 RDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRS 80 +D LVH+ +V + RQG+ KTR+EV G G+KPWRQKGTGRAR+GSI+SP+WR Sbjct: 30 KDSGMYLVHRALVKQSNEKRQGSANTKTRSEVRGGGRKPWRQKGTGRARAGSIRSPLWRG 89 Query: 81 GGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV--EAPKTKLLAQKL 138 GGV F +P+ ++K+NKK + AL++ L+ + +VVE F + PKTKL + + Sbjct: 90 GGVIFGPKPRSFAKKMNKKESQLALRTALNN--KSVNTLVVENFDTYFQKPKTKLFIEAI 147 Query: 139 KDMALE---DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQ 195 L+ +L+I + D N++L+ RNL+ V++ A ++ ++L+A KV++T DA+ + Sbjct: 148 TRWNLDLNKKLLVIVDKKDLNVYLSIRNLYNVEIISADTLNIMALLAAHKVIITVDALSK 207 Query: 196 VEEM 199 ++E+ Sbjct: 208 IQEV 211 >UniRef50_Q110A8 50S ribosomal protein L4 n=17 Tax=Cyanobacteria RepID=RL4_TRIEI Length = 212 Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 72/180 (40%), Positives = 114/180 (63%), Gaps = 7/180 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 +VH+ + A RQGT + KTR+EV G G+KPWRQKGTGRAR+GSI+SP+WR GGV F Sbjct: 32 IVHRSLRLQMANNRQGTASTKTRSEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGGVIFG 91 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE--APKTKLLAQKLKDMALE 144 +P+D+S K+N+K R AL + R + LIV+E S + PKTK L Q + ++ Sbjct: 92 PKPRDYSHKMNRKEKRLALSTAFQS--RSEDLIVIEDLSEQFTKPKTKELVQAITRWGID 149 Query: 145 ---DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 ++++ E EN++L+ RN+ K+ + A ++ ++A DK++ T A+ +++E+ Sbjct: 150 IQAKIVLVLPEKQENVYLSGRNIAKLKIILANNLNIYDILAADKIIATVTAIAKIQEVYG 209 >UniRef50_Q2LQA0 50S ribosomal protein L4 n=12 Tax=Bacteria RepID=RL4_SYNAS Length = 217 Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 121/195 (62%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K+ S + +++ FG + N+A+++ VV A R GT A K R++V+G GKKPWRQKGT Sbjct: 21 KNKVSEIELNDAVFGAEVNDAVIYDVVRMQMASRRFGTAATKGRSDVSGGGKKPWRQKGT 80 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRARSG+ +SPIWR GG+ F P+D+ V KK+ + AL+S+LS + +L+V++ F Sbjct: 81 GRARSGTSRSPIWRGGGIVFGPVPRDYKYNVPKKVRKNALRSVLSLKYQGQKLVVLKDFP 140 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 ++ KTK + + L+ L +T E +E L ++RN+ + + + G++ ++ + Sbjct: 141 LDEIKTKKFKEVVDRFGLKKALFVTEERNEFLEKSSRNIAGIKMVRSEGLNVYDVLNHEH 200 Query: 186 VVMTADAVKQVEEML 200 +V+ AVK++E L Sbjct: 201 LVIIEPAVKKLEGAL 215 >UniRef50_B8I7Y0 50S ribosomal protein L4 n=33 Tax=Firmicutes RepID=RL4_CLOCE Length = 207 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 118/191 (61%), Gaps = 1/191 (0%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + +S+ FG D N+ +H VVV A RQGT++ KT++EV G GKKPWRQKGTGRAR G Sbjct: 17 IQLSDNVFGTDVNKDALHAVVVNQLANRRQGTQSTKTKSEVRGGGKKPWRQKGTGRARQG 76 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 SI+S W GG+ +P+ + + KK+ R A+KS L+ V + + V++ +++A KT Sbjct: 77 SIRSAQWVKGGIVLGPKPRSYRYTLPKKVKRIAMKSALTSKVSGNEIFVLDALALDAIKT 136 Query: 132 KLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 K + L ++ ++ L++ +EN+ +ARN+ + ++ ++ +DK ++T Sbjct: 137 KSMVGVLNNLKVDSSALLVIDSKNENIVKSARNIPGIKTAYVNTLNVFDILKYDKFIITK 196 Query: 191 DAVKQVEEMLA 201 DAV++VEE+ A Sbjct: 197 DAVEKVEEVYA 207 >UniRef50_C6C186 50S ribosomal protein L4 n=6 Tax=Bacteria RepID=RL4_DESAD Length = 206 Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 70/174 (40%), Positives = 109/174 (62%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H VV + A RQGT A KTR G G KPWRQKGTGRAR+GS +SP+WR GG TF Sbjct: 32 ILHLVVRSQLAAKRQGTHATKTRGMKRGGGAKPWRQKGTGRARAGSTRSPLWRGGGTTFG 91 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDV 146 +P+D+S KVNKK+ R ALK L+ + +++++VV+ + KTKL + + + LE Sbjct: 92 PQPRDYSFKVNKKVRRLALKMALTSRLSEEKMMVVKNIDLPEIKTKLFVEVAEALGLEKA 151 Query: 147 LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 L++ + D L L+ARN+ + + A ++ ++ ++VM +A + ++E L Sbjct: 152 LVVVKDADNKLLLSARNIPGIKLITADQLNVYDILKARQLVMLENAAQDLQERL 205 >UniRef50_C1F641 50S ribosomal protein L4 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=RL4_ACIC5 Length = 222 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/182 (40%), Positives = 109/182 (59%), Gaps = 3/182 (1%) Query: 22 DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSG 81 + NEAL+ + V Y A RQGT A K + V+GSGKK W+QKGTGRAR GS++SP+WR G Sbjct: 28 EVNEALLWEAVKHYRASLRQGTHATKNKKLVSGSGKKLWKQKGTGRARVGSVRSPLWRHG 87 Query: 82 GVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM 141 G +P+ + KK GAL+S L+ + +LIVVE F V PKTKL L + Sbjct: 88 GTVHGPQPRSYDYAFPKKKLMGALRSALAAKLADGKLIVVESFEVSEPKTKLYRTALDKL 147 Query: 142 -ALEDVLII--TGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 A L++ + L ENL+L ARNL V++ + P L+ +++ + + A+++++E Sbjct: 148 EANRSTLLVESSQSLTENLYLGARNLANVELVLNNEVHPYDLLRYERAIFSRAAIEKLQE 207 Query: 199 ML 200 L Sbjct: 208 SL 209 >UniRef50_P10135 50S ribosomal protein L4 n=9 Tax=Bacteria RepID=RL4_MYCCT Length = 208 Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 122/193 (63%), Gaps = 3/193 (1%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + +++ +G + ++ ++ V++ A RQGT+ KTRAEV+G G+KPW+QKGTGRAR G Sbjct: 16 IALNDYVWGIEPHQQAIYDTVISQQAALRQGTKKVKTRAEVSGGGRKPWKQKGTGRARQG 75 Query: 72 SIKSPIWRSGGVTFAARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 SI++P W+ GGVTF P ++ + VNKK+ A +S+LS V+++ L++V+KF P Sbjct: 76 SIRAPQWKGGGVTFGPTPDINYKKSVNKKVRALAFRSVLSLKVKENNLVIVDKFDFAKPS 135 Query: 131 TKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 TK + +K++ ++D LI+T E +E + ++ N+ V A ++ L+ K+++ Sbjct: 136 TKEMVVVMKNLKIDDQKTLIVTKEKEELVVKSSNNITGVKTISANQLNVFDLLNATKLLI 195 Query: 189 TADAVKQVEEMLA 201 T +A VEE+ A Sbjct: 196 TEEAAIAVEEVYA 208 >UniRef50_B2KEM0 Ribosomal protein L4/L1e n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEM0_ELUMP Length = 211 Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 112/190 (58%), Gaps = 2/190 (1%) Query: 14 VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSI 73 + E F N +H+VV A+ A R+GT KTRAEV+G+GKKPW+QKGTGRAR GS+ Sbjct: 18 LPEVLFSAKPNPTFLHEVVTAFLANQRRGTADVKTRAEVSGTGKKPWKQKGTGRARHGSM 77 Query: 74 KSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKL 133 +SPIWR GGV F P+ Q + + R AL LS + +IV ++ KTK+ Sbjct: 78 RSPIWRHGGVAFGPTPRSFRQYLPAQKRRAALIQALSAKYAEGNVIVFNDGGIKESKTKV 137 Query: 134 LAQKLKDM-ALEDVLIITGE-LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTAD 191 LA LK M A L++T E D +FL+ARN+ + + A+ ++ ++ K+++T D Sbjct: 138 LATALKAMEAGRKPLVLTTEKTDNKVFLSARNIAGLSLIPASDVNAYVVLNSSKIIITKD 197 Query: 192 AVKQVEEMLA 201 A++ ++ A Sbjct: 198 ALETLKSTFA 207 >UniRef50_Q30Z43 50S ribosomal protein L4 n=8 Tax=Bacteria RepID=RL4_DESDG Length = 206 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 73/195 (37%), Positives = 115/195 (58%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K LT++ F + +++ VV A A R GT + KTR+ ++G G KPWRQKGT Sbjct: 11 KKETGELTLAPEVFEVEVRPEILNLVVRAQRAAKRAGTHSVKTRSTISGGGAKPWRQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRARSGS +SP+WR G V F +P+D+S KVNKK+ + ALK LS + ++ L+VV+ Sbjct: 71 GRARSGSNRSPVWRGGAVVFGPQPRDYSFKVNKKVRKLALKMALSSRLAEENLMVVKGIE 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + KTK + + + L L++T E+D+ L L+ARN+ + + + ++ + Sbjct: 131 LPEVKTKHMVKVAGALGLGKALVVTPEMDDKLVLSARNIPGITLMTPEQLSVFEILKHAQ 190 Query: 186 VVMTADAVKQVEEML 200 +V+ AV+ V+E L Sbjct: 191 LVLLEGAVEPVQERL 205 >UniRef50_C0QVZ7 50S ribosomal protein L4 n=3 Tax=Brachyspira RepID=RL4_BRAHW Length = 215 Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 120/210 (57%), Gaps = 13/210 (6%) Query: 1 MELVL----KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME+V+ D+ L + + F + N L+++ + A RQGT + KTRAEV+G G Sbjct: 1 MEVVILNENGDSVGNLEIVDEIFKSEVNNNLLYEAIKNELANRRQGTHSTKTRAEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPWRQKGTGRAR+GS +SPIW GG T +P+D+S ++ KKM R AL S+LS + Sbjct: 61 KKPWRQKGTGRARAGSTRSPIWVGGGKTHTPKPRDYSYRLPKKMKRKALLSVLSLKYGSN 120 Query: 117 RLIVVEKFSVEAPKTKLLA---QKLKDMALEDVLIITGE---LDEN---LFLAARNLHKV 167 L V E F+ +APKTK +A K+K+ V + G+ L +N L L+ RN+ + Sbjct: 121 VLKVFEDFTFDAPKTKRMASFISKVKEPNTRKVAFVVGKDESLGDNYNKLLLSLRNIKDL 180 Query: 168 DVRDATGIDPVSLIAFDKVVMTADAVKQVE 197 + +A + L D+V T A+ ++ Sbjct: 181 KLVNADSMSIHPLFYADEVYFTKTALSKLN 210 >UniRef50_D1NBS4 Ribosomal protein L4/L1e n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBS4_9BACT Length = 209 Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/179 (42%), Positives = 106/179 (59%), Gaps = 2/179 (1%) Query: 25 EALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVT 84 E VH VVAY AG R GT KTR EV+G G KP+RQKG GRAR+GS +SP+W GG Sbjct: 31 EQAVHDTVVAYLAGQRAGTACTKTRGEVSGGGAKPFRQKGMGRARAGSSRSPVWVGGGTI 90 Query: 85 FAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM--A 142 F RP+ ++KVNKK+ + ALK LSE + + L++++KF + KT+ LK++ A Sbjct: 91 FGPRPRSFAKKVNKKVLQLALKRALSERIVEGDLVLLDKFELADHKTRNAFAILKNLNVA 150 Query: 143 LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 E V+I ELD A N+ V +R ++ L+ F K++ T DA+ + LA Sbjct: 151 NETVMISLPELDAASVCATGNIPNVVLRKTDTVNVYELLRFKKLLFTKDALDAFIQRLA 209 >UniRef50_C1A6Q6 50S ribosomal protein L4 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6Q6_GEMAT Length = 213 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 2/184 (1%) Query: 14 VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSI 73 + E TF N ++HQ V A+ A RQGT KTR EVTG +KPW+QKGTGRAR GS Sbjct: 25 LPEGTFDGIVNVPVMHQAVKAFLANRRQGTAKTKTRGEVTGGNQKPWKQKGTGRARQGST 84 Query: 74 KSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKL 133 ++P W GG F +P+ ++Q V K++ A KS L+ R++ ++VVE + APKTK Sbjct: 85 RAPNWPGGGTVFGPQPRSYTQIVPKQVRVLARKSALNARARENAVVVVEALNFSAPKTKA 144 Query: 134 LAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTAD 191 + + + + + VL++T + N++L+ARNL + V + + ++ D VV+ + Sbjct: 145 MTELFTKLGVLGKKVLVLTDGVKPNVYLSARNLGQAHVMPYSDANTYHILWSDVVVIESS 204 Query: 192 AVKQ 195 A+ Q Sbjct: 205 ALTQ 208 >UniRef50_B2V7L2 Ribosomal protein L4/L1e n=4 Tax=Hydrogenothermaceae RepID=B2V7L2_SULSY Length = 208 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/192 (39%), Positives = 115/192 (59%), Gaps = 2/192 (1%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + E F + N+ V +V+ + A R GT + KTRAEV GS +K + QKGTGRAR G Sbjct: 16 INLKEDIFKTEVNQGTVWEVIKWHLASKRAGTASTKTRAEVAGSNRKIYPQKGTGRARHG 75 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 IK+ I+ GGV P+D+ + KK+ R LK +L+ + + LIVV+ F+ EAPKT Sbjct: 76 DIKANIFVGGGVAHGPHPRDYYFALPKKVRRKVLKGVLTYKLNNNELIVVDDFNFEAPKT 135 Query: 132 KLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 K + LK LE+ VL++ E EN+ + RN+ KV + A GI+ ++ DKV++ Sbjct: 136 KNAIEVLKSFGLENSKVLLVLPEKLENVIKSFRNIPKVKILLAEGINSYDVLNNDKVIIF 195 Query: 190 ADAVKQVEEMLA 201 A+++++E LA Sbjct: 196 KSALEKIQERLA 207 >UniRef50_A6DPN5 50S ribosomal protein L4 n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPN5_9BACT Length = 215 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/183 (39%), Positives = 115/183 (62%), Gaps = 6/183 (3%) Query: 25 EALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVT 84 E VH+ VVA+ A R G+ KTR+E G G+KPWRQKGTG AR+GS +SPIW GGV Sbjct: 30 EQAVHESVVAFLASLRSGSANTKTRSEKRGGGRKPWRQKGTGNARAGSTRSPIWTGGGVA 89 Query: 85 FAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE 144 F +P+ +++ VNKK+ R A++ L+E ++ + LIVV+ F+ E P TK L+ + Sbjct: 90 FGPKPRSYAKNVNKKVRRLAVRRALAERIQAEELIVVDSFAFEKPSTKTAIAFLESVNAA 149 Query: 145 D--VLIITGELD---ENLFLAARNLHKVD-VRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 D V+I++ +L ENL A++ + V V A+ ++ +++ KV++T A++QV + Sbjct: 150 DRPVIILSDDLTENIENLENTAKSFNNVSLVMTASEVNAYDILSGKKVIITKAALEQVGQ 209 Query: 199 MLA 201 ++ Sbjct: 210 RIS 212 >UniRef50_B1ZNE7 Ribosomal protein L4/L1e n=3 Tax=Verrucomicrobia RepID=B1ZNE7_OPITP Length = 210 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 109/180 (60%), Gaps = 1/180 (0%) Query: 18 TFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPI 77 TF D V +V+VA A RQGT + KTR EV G GKKPWRQKGTGRAR+GSI+SP+ Sbjct: 22 TFEGDKGLQAVKEVIVAINANNRQGTHSTKTRGEVRGGGKKPWRQKGTGRARAGSIRSPL 81 Query: 78 WRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQK 137 W GGV F +P+D+S+K+N K+ + A L + + V+E F +A KTK Q Sbjct: 82 WGGGGVVFGPKPRDYSKKINAKVKQLAFSRALFDRASAGEIAVIEAFDSKATKTKAFNQI 141 Query: 138 LKDMALED-VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 L +A + VL++ A+RNL +V +++A ++ + L + K+++++ A++ + Sbjct: 142 LGRIAPKGKVLLVDAPFAAEAARASRNLERVTLQEAAKLNTLDLAQYQKIIVSSKALEAI 201 >UniRef50_C6HWF6 Ribosomal protein L4 n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWF6_9BACT Length = 210 Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 120/200 (60%), Gaps = 6/200 (3%) Query: 7 DAQSALTVS-ETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 D +S+ T+S ++ +D FN +VH++ AG R GT + KTR EV+G GKKP+RQKG Sbjct: 9 DGKSSSTISIDSEVTQDSFNNGIVHEITTMELAGMRAGTSSTKTRGEVSGGGKKPYRQKG 68 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TGRAR GS ++P WR G + F RP+++ K K AL+ L V ++++ ++ Sbjct: 69 TGRARQGSSRAPQWRGGAIIFGPRPRNYFYKQPSKKVLKALREALLVRVSENKVSIIPNL 128 Query: 125 SVEAPKTK----LLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 E KTK LL + + +++LII+ ELDEN +L++RN+ + + +T + + + Sbjct: 129 ESETLKTKKFVDLLKKYHTNPGYQNILIISEELDENTWLSSRNIPGLTILPSTAVTALYM 188 Query: 181 IAFDKVVMTADAVKQVEEML 200 + D V++ D+ + ++++L Sbjct: 189 VFTDVVLVAEDSREWLQQLL 208 >UniRef50_B2UMT9 Ribosomal protein L4/L1e n=2 Tax=Verrucomicrobiaceae RepID=B2UMT9_AKKM8 Length = 202 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 1/176 (0%) Query: 20 GRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWR 79 G D VH ++VAY A R G+ KTRAEV+G+ KK +RQKGTG AR G ++PI+ Sbjct: 20 GSDKGSQAVHDLIVAYQANRRTGSANSKTRAEVSGNNKKIFRQKGTGNARHGDKRAPIFV 79 Query: 80 SGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLK 139 GGV F RP D+S+KVNK R AL+ +L +L+ ++ V +FSV KTK + +K Sbjct: 80 GGGVVFGPRPCDYSKKVNKSTRRLALRRVLGDLIAASKVSTVSEFSVADGKTKSFIKAVK 139 Query: 140 DMA-LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 D+ + VLI+ DE + AARN+ +V + A ++ L+ D V++ +A++ Sbjct: 140 DLTDAKKVLIVAASFDETTYRAARNVQEVLLMTAAEVNIEQLMNADAVILVDNALE 195 >UniRef50_C1SPI5 Ribosomal protein L4 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPI5_9BACT Length = 208 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 111/191 (58%), Gaps = 2/191 (1%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS-GKKPWRQKGTGRARS 70 + +S+ +L+H+VV+ A R GT + RA++ G G KPWRQKGTGRARS Sbjct: 17 IDLSDEIMSYPVKSSLMHEVVIMQLANRRAGTHSTLNRAKMKGGRGAKPWRQKGTGRARS 76 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 GS KSPIWR G F +P+D+S + KK + ALKS + + +++ SVE K Sbjct: 77 GSRKSPIWRGGATCFGPQPRDYSYSMPKKKIKNALKSAIRAKTEAGAVHILDALSVENGK 136 Query: 131 TKLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 TK + LK+ A + VLI+ ELD+ A RN+ VD+ D G++ +I +++ Sbjct: 137 TKEAVEILKNFAADRKVLIVFKELDDKAVCAFRNIPYVDLLDVNGLNVYDVINSRTILVC 196 Query: 190 ADAVKQVEEML 200 DAV++++E+L Sbjct: 197 KDAVERIQEVL 207 >UniRef50_A0L5X4 50S ribosomal protein L4 n=1 Tax=Magnetococcus sp. MC-1 RepID=RL4_MAGSM Length = 207 Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 124/206 (60%), Gaps = 5/206 (2%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 +++ +KDA + + ++E+ FGR+ L+ V A R GT R++V G G Sbjct: 2 IQVPVKDANNQEVRSTELNESVFGREIRADLLGMAVNYQLAKRRLGTATVLGRSDVRGGG 61 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKP+RQKGTG AR G+I++P +R+GG+ F + +D+S K+NKK+ + AL++ LS + Sbjct: 62 KKPYRQKGTGNARQGTIRAPQFRTGGIVFGPQQRDYSHKLNKKVRKLALQTALSVKASSE 121 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 ++VV+K + + KTK + L + A ++ EL + L+ARN+ V V D G+ Sbjct: 122 EMVVVDKLELASIKTKEMKALLSTLGAARSTFLVVKELSNEIVLSARNIPNVMVADVDGV 181 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + L+ ++K+V+T +AV+ +EE LA Sbjct: 182 NVYDLLRYEKLVITEEAVRSLEEKLA 207 >UniRef50_P49546 50S ribosomal protein L4, chloroplastic n=3 Tax=Bacillariophyta RepID=RK4_ODOSI Length = 215 Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 114/180 (63%), Gaps = 7/180 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H+ ++ + + RQGT + KTR+EV G G+KPWRQKGTGRAR+GS +SP+W+ GGV F Sbjct: 37 LIHKDILRHQSSQRQGTISTKTRSEVRGGGRKPWRQKGTGRARAGSSRSPLWKGGGVIFG 96 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVEAPKTKLLAQKLKDMAL- 143 +P+ K+NKK + AL+++L +++ + +++ +++ PKTK K+ + Sbjct: 97 PKPRKIILKLNKKERKLALQTLLYN--KRNNISIIDNLETNLDLPKTKTFYSLCKNCEIN 154 Query: 144 --EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 + +LII GE L LA RN+ V++ A+ ++ SL+ +++MT AVK ++E+ Sbjct: 155 LDQKILIIVGEKTIPLKLATRNIKNVELILASNLNTFSLLKAKQILMTPLAVKDIKEIYC 214 >UniRef50_Q6B8V4 50S ribosomal protein L4, chloroplastic n=1 Tax=Gracilaria tenuistipitata var. liui RepID=RK4_GRATL Length = 217 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 64/178 (35%), Positives = 106/178 (59%), Gaps = 7/178 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H+ ++ + R +TR EV+G G+KPW+QKGTGRAR+GS +SP+WR GGV F Sbjct: 39 ILHRALIHQLSNHRNRNAHTQTRGEVSGGGRKPWKQKGTGRARAGSNRSPLWRGGGVIFG 98 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVEAPKTKLLAQKLKDMALE 144 R + + K+NKK + AL+ +++ + IV E F + P TK+L LK L+ Sbjct: 99 PRHKKYVNKINKKEKQLALRILINNKFKNT--IVTENFISKISTPNTKILVNNLKKYNLD 156 Query: 145 ---DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 ++LII E +L+L+ RNL V++ A ++ VSL+ + +++ DA+ + +M Sbjct: 157 TNNNILIIVNEKSNDLYLSTRNLKNVELLAANHLNIVSLLKANHIIINKDALDIINKM 214 >UniRef50_Q39Y05 50S ribosomal protein L4 n=11 Tax=Desulfuromonadales RepID=RL4_GEOMG Length = 220 Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 113/195 (57%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K+ + +S+ F D E L+H+ V A R GT K RA V+G GKKP++QKGT Sbjct: 24 KNKVGEMDLSDAVFNGDVREYLIHEAVKVQLANRRAGTVGVKNRAAVSGGGKKPFKQKGT 83 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 G+AR G I++P + GGV F + + ++ +NKK + A++S LS L ++++L V++ S Sbjct: 84 GQARQGCIRAPHYVGGGVAFGPQAKTYALSMNKKARKAAVRSALSMLFKENKLSVLDCLS 143 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + + TK LK + L+I E + NL L+ARN+ V V A ++ ++ F+ Sbjct: 144 LPSISTKGFVGVLKTFDVTKTLVIIDEANTNLELSARNVKDVKVLKAEHLNVFDIVKFNN 203 Query: 186 VVMTADAVKQVEEML 200 +++T AV+++E L Sbjct: 204 IILTQSAVRKIEGAL 218 >UniRef50_Q1Q137 Strongly similar to 50S ribosomal protein L4 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q137_9BACT Length = 203 Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 2/169 (1%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+ VV Y A RQGT + KTRAEV+G GKKPW QK TG+AR+GS +SPIWR GGV F Sbjct: 31 LLRDVVKMYEANKRQGTVSTKTRAEVSGGGKKPWAQKHTGKARAGSSRSPIWRGGGVAFG 90 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDV 146 +P+D+S + K + AL S LS ++ + ++VV+K +PKTK + LK + + Sbjct: 91 PKPRDYSYSIPKMAKKQALFSALSSKIKDNEVVVVDKLDFASPKTKHMVSLLKSFGMVGI 150 Query: 147 --LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAV 193 LI+ + E+L ++RN+ V + + ++ ++ K+++T A+ Sbjct: 151 SSLIVISKATESLLKSSRNIPYVRMMECHDLNAYEILKPKKILITKQAL 199 >UniRef50_D2SHA2 Ribosomal protein L4/L1e n=2 Tax=Actinobacteria (class) RepID=D2SHA2_9ACTO Length = 292 Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 115/187 (61%), Gaps = 2/187 (1%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 ++T+ F N +L+HQVVVA A ARQGT A KTR +V+G G KP+RQKGTGRAR Sbjct: 30 SVTLPGELFDASANVSLMHQVVVAQLAAARQGTHATKTRGQVSGGGIKPYRQKGTGRARQ 89 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF-SVEAP 129 GSI++P + GG +P+D+SQK KKM AL+ LS+ R++R+ VV F +AP Sbjct: 90 GSIRAPQFTGGGTVHGPQPRDYSQKTPKKMKAAALRGALSDRARENRVHVVSTFVDGDAP 149 Query: 130 KTKLLAQKLKDMALEDVLIITGELDENL-FLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 +TK L+ + +++ + D+ L +++ RN+ +V + +A ++ ++ D+VV Sbjct: 150 RTKAALATLESITRAKRVLVVLDRDDVLNWVSLRNVPQVHLLEAGQLNTYDVLVADEVVF 209 Query: 189 TADAVKQ 195 T A+ + Sbjct: 210 TEAALAE 216 >UniRef50_B1GZ84 50S ribosomal protein L4 n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ84_UNCTG Length = 206 Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 108/181 (59%), Gaps = 1/181 (0%) Query: 19 FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW 78 FG+ + AL+H+V +AY R GT KTR EV+ SG KPW+QKGTG AR+G SP+W Sbjct: 22 FGKKVSVALLHEVTMAYLNNLRAGTHKTKTRGEVSFSGAKPWKQKGTGNARAGQKNSPLW 81 Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKL 138 R GG+ F +P+++ K++K+ + +L S ++ +IVV+ V KTK +A+ + Sbjct: 82 RKGGIIFGPQPRNYYTKISKRKKKLSLDMAFSAQLKNGNIIVVDSVKVSEVKTKKVAELI 141 Query: 139 KDMALEDVLIITG-ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVE 197 K++ + I+ D + +AARN+ V V + I+ ++ DK+V+T +AV ++ Sbjct: 142 KNLKVGGKKIVFAIPSDTDFKVAARNIKNVIVENIKNINAYQVLWADKLVITPEAVDLIK 201 Query: 198 E 198 E Sbjct: 202 E 202 >UniRef50_Q1ISC1 50S ribosomal protein L4 n=2 Tax=Acidobacteria RepID=RL4_ACIBL Length = 217 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 110/191 (57%), Gaps = 2/191 (1%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 + +++ FG NE L+ + V Y AG +GT A K + V+G+GKK W+QKGTGRAR Sbjct: 16 SFELADEVFG-AVNEDLLWEAVKHYRAGQHRGTHATKNKKLVSGAGKKLWKQKGTGRARV 74 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 GSI+SP+WR GG +P+ + +K GAL+S L+ + +L VVE F V+ PK Sbjct: 75 GSIRSPLWRHGGTVHGPQPRSYDYAFPRKKLLGALRSALAAKLADGKLTVVESFDVKEPK 134 Query: 131 TKLLAQKLKDMALEDV-LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 + L + ++ L+I ++NL L++RNL V++ + P L+ +D+ V+ Sbjct: 135 ANAFRKTLAGLKVDKTALLIESAENKNLELSSRNLKGVELVAGNAVHPYHLLRYDRAVIA 194 Query: 190 ADAVKQVEEML 200 A+++++ L Sbjct: 195 RPALEKLQNSL 205 >UniRef50_A5IM84 50S ribosomal protein L4 n=51 Tax=Bacteria RepID=RL4_THEP1 Length = 235 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 20/211 (9%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 L +S+ F D N ++ + V + R GT + KTR EV+G G+KPW QK TGRAR Sbjct: 16 TLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRKPWPQKHTGRARH 75 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 GSI+SPIWR GG+ +P+D S+K+NKKM + AL+S LS R+++L V++ +E PK Sbjct: 76 GSIRSPIWRHGGIAHGPKPRDWSKKLNKKMKKLALRSALSVKYRENKLFVLDDLKLERPK 135 Query: 131 TKLLAQKLKDMALED--VLIITGELDE---NLFLAARNLHKVDVRDA------------- 172 TK L + L+++ L D LI+ DE N+ L+ +NL V V A Sbjct: 136 TKFLKEILQNLQLSDKKTLIVLPWKDEGYMNVKLSGKNLPNVKVIIADNPNNSKNGEKAV 195 Query: 173 --TGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 G++ ++ +D +V+T D V ++EE+L Sbjct: 196 RIDGLNVFDMLKYDYLVLTQDMVSKIEEVLG 226 >UniRef50_C1Z9D6 LSU ribosomal protein L4P n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1Z9D6_PLALI Length = 209 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/173 (39%), Positives = 104/173 (60%), Gaps = 2/173 (1%) Query: 23 FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGG 82 N+ L+H VV Y A RQGT K+RAE+ GS +K ++QKGTGRAR G+ + P+ R GG Sbjct: 29 INKQLLHDAVVMYQANLRQGTFKSKSRAEIAGSKQKLFKQKGTGRARQGNKRQPVRRGGG 88 Query: 83 VTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMA 142 FA RP D S ++ +K + A + L + + + ++E ++EAPKTK++A L + Sbjct: 89 HAFAKRPTDFSYRLPRKALQLATRMALLGKFQDNEVTIIESLALEAPKTKVVASLLNKLG 148 Query: 143 LED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAV 193 LE LI D N++ +ARN+ KV V A G++ L+ ++V+T DA+ Sbjct: 149 LESKGCLISIPSHDSNVWKSARNIPKVGVSPAAGLNAYQLLLRKQLVVTTDAL 201 >UniRef50_Q1D774 50S ribosomal protein L4 n=3 Tax=Myxococcales RepID=RL4_MYXXD Length = 207 Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 115/193 (59%), Gaps = 1/193 (0%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 S + +S+ FG + N L ++V R+GT K + V+G GKKPW+QKGTGRAR Sbjct: 15 SEIELSDDVFGTEPNAHLFYEVAKMQQINRRRGTVGVKNTSLVSGGGKKPWKQKGTGRAR 74 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 GSI++ W GG A + +D+ + +K+ RGALKS LS ++ LI+++ FS++AP Sbjct: 75 QGSIRASHWVGGGKAMAPKARDYFYRPPRKVRRGALKSALSLRAQEKTLIILDGFSLDAP 134 Query: 130 KTKLLAQKL-KDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 K+K + L K + L++ L+I + + NL + RNL K DV G++ +++ +V+ Sbjct: 135 KSKQAFEVLTKRLKLQNALVIDDKGNTNLHRSVRNLAKFDVLPPEGLNLEAVLRHSHLVL 194 Query: 189 TADAVKQVEEMLA 201 T+ A K +E L+ Sbjct: 195 TSAAAKTLEGALS 207 >UniRef50_A4FPM4 50S ribosomal protein L4 n=49 Tax=Actinobacteria (class) RepID=RL4_SACEN Length = 228 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 103/174 (59%), Gaps = 2/174 (1%) Query: 24 NEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGV 83 N AL+HQVVVA A RQGT A KTR +V+G GKKP+RQKGTG AR GSI++P + GG Sbjct: 30 NIALMHQVVVAQLAAGRQGTHATKTRGQVSGGGKKPYRQKGTGNARQGSIRAPQFTGGGT 89 Query: 84 TFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK-FSVEAPKTKLLAQKLKDMA 142 +P+D+SQ+ KKM AL+ LS+ VR +L VV E P TK ++ Sbjct: 90 VHGPQPRDYSQRTPKKMKVAALRGALSDRVRAGQLHVVSHVVGGEQPSTKQARTAVRTWT 149 Query: 143 -LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQ 195 + VL++ + +E +L+ RNL V + D + ++ ++ D VV T A ++ Sbjct: 150 EAKRVLVVLNKSEETSWLSLRNLQNVHLIDPSQLNTYDVLVNDDVVFTKAAFER 203 >UniRef50_C5JB89 50S ribosomal protein L4 n=1 Tax=uncultured bacterium RepID=C5JB89_9BACT Length = 217 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 119/206 (57%), Gaps = 5/206 (2%) Query: 1 MELVLKDA--QSALTV--SETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 +E + DA Q++ TV S FG + L+ +VV A R GT + K R EV G G Sbjct: 2 IEFPVVDAANQTSHTVNLSSHAFGCEVRGDLLTRVVHYQLAKRRLGTASTKRRGEVRGGG 61 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KP+RQKGTG AR G+I++P +R+GGV F P+D+S K+N+K L++ LS + Sbjct: 62 HKPYRQKGTGNARQGTIRAPQYRTGGVVFGPHPRDYSVKMNRKERALGLRTALSAKREAE 121 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 LIV+ F + KT+ + Q L + A VLI+ E DE + +ARNL VDV G+ Sbjct: 122 ELIVLTDFGLTEIKTRSMLQVLTRLNAANSVLIVLPESDERIERSARNLPGVDVIQVDGV 181 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + L+ +K++MT A++++E +A Sbjct: 182 NVYDLLVHEKLLMTEAALQKLEARVA 207 >UniRef50_B3EUM2 50S ribosomal protein L4 n=71 Tax=cellular organisms RepID=RL4_AMOA5 Length = 210 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 115/195 (58%), Gaps = 2/195 (1%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 KD + +S+T FG N+ ++ V A RQGT K R E+ GS KK +QKGT Sbjct: 11 KDTGRKVVLSDTIFGITPNDHAIYLDVKNILANKRQGTHKSKERGEIAGSTKKIKKQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 G AR+GSIKSPI+R GG F +P+D+ K+NKK+ + A KS L+ +Q + V+E FS Sbjct: 71 GTARAGSIKSPIFRGGGRVFGPKPRDYGFKLNKKLKKLARKSALTYKAQQGNISVLEDFS 130 Query: 126 VEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 E PKTK+ + L+++ + D L+I +D+NL LA+RNL V I+ L+ Sbjct: 131 FEMPKTKMYLEMLQNLNMADQKTLLILPAVDKNLVLASRNLPNTSVALVEQINTYDLLYS 190 Query: 184 DKVVMTADAVKQVEE 198 K++++ A+ ++ E Sbjct: 191 KKILISETALSKLTE 205 >UniRef50_D1J751 Chloroplast 50S ribosomal protein L4 n=2 Tax=Phaeophyceae RepID=D1J751_ECTSI Length = 232 Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 115/184 (62%), Gaps = 6/184 (3%) Query: 20 GRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWR 79 G++ + ++++ +A RQGT TRAEV G G+KPWRQKGTGRAR+GS +SP+W+ Sbjct: 48 GQETDNYILYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWK 107 Query: 80 SGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE-KFSVEAPKTKLLAQKL 138 GGV+F +P+ + K+N+K ++ A++ ++ ++++ + +++ FS KT + Sbjct: 108 GGGVSFGPKPKTYINKLNRKEWQLAVRGLI--ILKEPSITIIDHNFSSIDNKTNIFINLF 165 Query: 139 K--DMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQ 195 K D++ +++ I ++ENLF RN+ V + A ++ ++L+ D + ++ D++K Sbjct: 166 KGCDISFSKNITFIVPAIEENLFKVTRNIKTVTIMRADTLNLITLLESDHLFISKDSLKI 225 Query: 196 VEEM 199 +EE+ Sbjct: 226 IEEI 229 >UniRef50_D0J9J1 50S ribosomal subunit protein L4 n=2 Tax=Blattabacterium RepID=D0J9J1_BLASP Length = 210 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MELVLKDAQSALTVSETTFGRDF--NEALVHQV---VVAYAAGARQGTRAQKTRAEVTGS 55 MEL + D + T + F F ++ H + V Y + RQGT K R E++GS Sbjct: 1 MELEILDIKGNSTNRKVLFNEKFFSKKSYDHPIYLEVKRYLSAQRQGTHKSKERGEISGS 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQ 115 +K RQKGTG +R G IK+P++R GG F P+ + K+NK A K+I+ ++ Sbjct: 61 RRKLHRQKGTGGSRKGDIKNPLFRGGGRVFGPTPRRYFMKINKLTKNLAKKNIIEHKLKT 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDAT 173 ++ ++E F ++ PKTKL+ LK + L E L+I + D NL L+ARNL + +A Sbjct: 121 KKVKIIEDFQLKKPKTKLVLNILKSLQLMNEKSLMIVEKADRNLHLSARNLKNFQLLNAE 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEML 200 ++ SL+ V+++ ++VK++E +L Sbjct: 181 ELNSYSLLNSSYVILSENSVKRIERIL 207 >UniRef50_A3EVS0 Ribosomal protein L4 n=2 Tax=Leptospirillum sp. Group II RepID=A3EVS0_9BACT Length = 218 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 103/182 (56%), Gaps = 4/182 (2%) Query: 23 FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGG 82 N L+H+++ AG R GT + KTR EV+G GKKP+RQKGTGRAR GS ++P WR G Sbjct: 28 INIPLLHEIIKMQRAGIRSGTASTKTRGEVSGGGKKPYRQKGTGRARQGSTRAPQWRGGA 87 Query: 83 VTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMA 142 + F RP+D+ + K A+K+ + + L VV+ V + KTK L + Sbjct: 88 IIFGPRPRDYFYRQPAKKVVLAVKNAIFSHLENKSLYVVDSLDVPSRKTKDLIALFNKWS 147 Query: 143 L----EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 L E +LII L EN++ + RN+ +++ ++P L+ DKV+++ +A + + Sbjct: 148 LFPGEERILIIDNGLSENIYYSCRNIPGLEILLPHQVNPYDLLIADKVLVSKEAFENMNV 207 Query: 199 ML 200 +L Sbjct: 208 LL 209 >UniRef50_Q8VY61 50S ribosomal protein L4 n=18 Tax=Magnoliophyta RepID=Q8VY61_ARATH Length = 300 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 107/176 (60%), Gaps = 2/176 (1%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H VV A +QGT + KT +EV+G+G+KPW QKGTGRAR G+++ P +R G V Sbjct: 119 IIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGCVMHG 178 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM-ALED 145 +P+ H+ K+NK++ R LK L+ + +L+V + + KTK + M + Sbjct: 179 PKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGLPTHKTKNIVNYYNQMENTKK 238 Query: 146 VLIIT-GELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 VL++ G +DE L LA +NLH V++ + G++ S++ D ++M+ DAV ++ E + Sbjct: 239 VLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHDTLLMSRDAVNKIVERM 294 >UniRef50_UPI0001C30EB8 ribosomal protein L4/L1e n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30EB8 Length = 210 Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 76/192 (39%), Positives = 107/192 (55%), Gaps = 9/192 (4%) Query: 19 FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW 78 F FN LVH+ V + RQGT + KTR V G G KPWRQKGTGRAR+GS +SPIW Sbjct: 19 FTAKFNGPLVHETVRSELNALRQGTSSTKTRGNVRGGGAKPWRQKGTGRARAGSSRSPIW 78 Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKL 138 + GG F P+ ++ KVN+K R AL+S LS + L V + + +AP TK ++ L Sbjct: 79 KGGGTVFGPSPRHYTFKVNRKARRAALRSALSVQADRGSLAVFDATTFDAPSTKTASKLL 138 Query: 139 KDMALEDVLIITGELDE-NLFLAARNLHKV---DVRDATGIDPV---SLIAFDKVV--MT 189 D + ++ + DE N L+ RNL ++ V DA D + SL+ + + +T Sbjct: 139 ADWGQPNPTLVLLDADEANAGLSFRNLERILVLPVEDAGVADVIGAASLLISETALAQIT 198 Query: 190 ADAVKQVEEMLA 201 A A+ V+E A Sbjct: 199 ARAIGAVQEEAA 210 >UniRef50_A9UV13 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UV13_MONBE Length = 229 Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 113/203 (55%), Gaps = 3/203 (1%) Query: 1 MELVLKDAQ-SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKP 59 + ++L+ AQ + + T FG + ++H+VVV A R+G KTR EV G G+KP Sbjct: 4 VRMMLRRAQVGVMELDPTVFGEEIRVDIMHRVVVWQRALWRKGNAKTKTRGEVRGGGRKP 63 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKGTGRAR+GSI+ P WR GGV P+D SQK+ +K+ + ++ +S +Q+ L+ Sbjct: 64 HPQKGTGRARTGSIRVPNWRGGGVVHGPIPRDWSQKLPRKVRQKGVRVAISTRYQQNDLV 123 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDE--NLFLAARNLHKVDVRDATGIDP 177 +V+ + KTK LA+ LE L + G ++ NL A RN+ A G Sbjct: 124 IVDDLVLPTLKTKSLAEIAAQHRLESALFVYGHDEDSMNLKWACRNMPAFHATSAAGAHV 183 Query: 178 VSLIAFDKVVMTADAVKQVEEML 200 +++ DK+V++ AV+ +E L Sbjct: 184 YNILKHDKLVLSVSAVRDLERRL 206 >UniRef50_B6WX21 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WX21_9DELT Length = 207 Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 105/186 (56%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 LT+S F + +++ VV A A R GT KTRA V+G G KPW+QKGTGRARSG Sbjct: 17 LTLSADVFEVEARPEILNLVVRAQMAAKRAGTHMAKTRAFVSGGGVKPWKQKGTGRARSG 76 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 S +SP+WR G + F +P+D+S KVN K+ A+K LS + + L+VV+ + KT Sbjct: 77 SNRSPVWRGGAIVFGPQPRDYSFKVNSKVRALAMKMALSSRLAAENLLVVKGIELPEAKT 136 Query: 132 KLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTAD 191 K A+ + L LI+T E E L +ARN+ + + + + ++ ++V+ Sbjct: 137 KHFAKVAGTLGLNKALIVTAEESEALTRSARNIPGITLTTPDRLSVLEILRHKQLVLLEG 196 Query: 192 AVKQVE 197 AV V+ Sbjct: 197 AVAPVQ 202 >UniRef50_B5JYE1 Ribosomal protein L4/L1 family (Fragment) n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JYE1_9GAMM Length = 101 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 61/100 (61%), Positives = 78/100 (78%) Query: 101 YRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA 160 YRGA+ SI SELVRQ+RL+VVE +V+APKTK L KLK+M LE VL+++ D NL+LA Sbjct: 1 YRGAMASIFSELVRQERLVVVEDITVDAPKTKQLVGKLKEMELESVLLVSETDDINLYLA 60 Query: 161 ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 ARNL+ VDV D G+ PV LI FDKV++T D++K+VEE L Sbjct: 61 ARNLNSVDVTDVAGLSPVDLIRFDKVLITVDSLKRVEEQL 100 >UniRef50_Q2JFH5 50S ribosomal protein L4 n=91 Tax=Actinobacteridae RepID=RL4_FRASC Length = 245 Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/185 (40%), Positives = 103/185 (55%), Gaps = 9/185 (4%) Query: 19 FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW 78 F N L+HQVVVA A ARQGT KTR EV G G+KP+RQKGTGRAR GS+++P + Sbjct: 36 FDVPLNIPLIHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPYRQKGTGRARQGSLRAPQF 95 Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF-SVEAPKTKLLAQK 137 GG P+ + Q+ KKM AL+ LS+ R +R+ VV S E P TK Sbjct: 96 TGGGTVHGPTPRRYDQRTPKKMKAAALRGALSDRARNNRVHVVSSLVSGETPSTKSAVTA 155 Query: 138 LKDMA-LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 L+ +A VL++ DE + + RN+ V + +DP L +D V+ +D V + Sbjct: 156 LRTIADTRRVLVVASRSDELTWKSLRNVAAVHL-----LDPGQLNTYD--VLVSDDVVFI 208 Query: 197 EEMLA 201 E+ LA Sbjct: 209 EDALA 213 >UniRef50_C0Q9X2 50S ribosomal protein L4 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=RL4_DESAH Length = 207 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 109/184 (59%) Query: 14 VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSI 73 +++ F ++++H VV A R GT K R+EV+GS +K +RQKGTG ARSGS+ Sbjct: 19 LADEVFSIPVKKSVLHDVVRMQLARRRSGTAKSKGRSEVSGSTRKLYRQKGTGNARSGSV 78 Query: 74 KSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKL 133 KSP+ R GGV F P+ ++ + KK+ ALK LS + + L V++ F++++ KTK Sbjct: 79 KSPLRRGGGVIFGPAPRSYAYAIPKKVRALALKMALSSKLAANELSVIDTFAMDSIKTKE 138 Query: 134 LAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAV 193 + + L++ LI+ D NL L+ARN+ V V G++ ++ +D +++ A+ Sbjct: 139 FDSIIDHLGLKNTLIVIDGDDRNLVLSARNIPDVKVIRTEGLNVYDILKYDNLLLIESAI 198 Query: 194 KQVE 197 K++E Sbjct: 199 KEIE 202 >UniRef50_Q0EW37 50S ribosomal protein L4 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW37_9PROT Length = 207 Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 1/184 (0%) Query: 19 FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW 78 FG D + A VH+V A A+ R GT K R+EV+G GKKPW+QKGTGRAR+GS + W Sbjct: 24 FGLDADAAFVHRVYAALASAQRGGTSKVKDRSEVSGGGKKPWKQKGTGRARAGSSRQAQW 83 Query: 79 RSGGVTFA-ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQK 137 R GG + + ++NKK R AL LS+ +R+ +L VV+K + KTK Sbjct: 84 RHGGTAHGPSADTSFATRINKKERRRALCLALSDCLREGKLTVVDKLELAEIKTKAFVDT 143 Query: 138 LKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVE 197 L + + LI+ GE + + L+ RN+ + ++ L+ +VV+T+ A+ +E Sbjct: 144 LGALGADSGLIVLGESNNAVELSGRNVPNTRIVLDGQVNLHDLLKSKRVVLTSAAIDNLE 203 Query: 198 EMLA 201 E LA Sbjct: 204 ERLA 207 >UniRef50_UPI0000D54D0B 50S ribosomal protein L4 n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54D0B Length = 207 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 110/193 (56%), Gaps = 2/193 (1%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 ++ + F + N ++V Q V++ + RQGT + + R+ V G GKKPW+QKG G AR+ Sbjct: 15 SIKLDSNIFNIEVNSSVVRQAVLSELSNLRQGTHSSRNRSAVRGGGKKPWKQKGRGVARA 74 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 G+I+SP+W+ GG F P +++K+ KKM + A KS+L++ V+ L+V++ ++ + K Sbjct: 75 GTIRSPLWKGGGAVFGPEPHVYNKKLPKKMSKLARKSVLTKKVQDKELVVLDSINISSKK 134 Query: 131 TKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 T ++ + + + L++ ENL L++RN+ V + + + L+ + +++ Sbjct: 135 TADFISFMESINILNKKTLVLVDSYQENLILSSRNIRNVFIENVKTVSVYDLLDSEIILI 194 Query: 189 TADAVKQVEEMLA 201 + E+LA Sbjct: 195 DKLGINTFSEVLA 207 >UniRef50_Q2S3R3 50S ribosomal protein L4 n=2 Tax=Rhodothermaceae RepID=RL4_SALRD Length = 215 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 110/187 (58%), Gaps = 2/187 (1%) Query: 17 TTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSP 76 T F + N+ ++ V A RQGT K R EV GSG+K +RQKGTG AR G +SP Sbjct: 22 TVFDIEPNDHIIWLDVKRIQAHQRQGTSKTKERGEVRGSGRKLYRQKGTGNARVGDAQSP 81 Query: 77 IWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQ 136 I R GG ARP+D++ +N+K R A +S LS D + V+E FS++ P T+ L Sbjct: 82 IRRGGGRAHGARPRDYAHDLNQKEKRLARRSALSYKAANDNIQVIENFSLDRPDTRGLTD 141 Query: 137 KLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 + + +E D+L+ T E++ ++L+++NL V+V++ I+ V ++ D V++ A+ Sbjct: 142 LFELLGVEGQDILLATAEVEREVYLSSQNLPDVNVQEVQSINTVDILDADVVLLQEGALD 201 Query: 195 QVEEMLA 201 + ++L+ Sbjct: 202 WLTDVLS 208 >UniRef50_C4XG14 Putative uncharacterized protein n=2 Tax=Mycoplasma RepID=C4XG14_MYCFE Length = 378 Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 102/177 (57%), Gaps = 7/177 (3%) Query: 25 EALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVT 84 E + ++A A RQGT K R+EV+G GKKPWRQKGTGRAR+GS +SPIW GG Sbjct: 201 EQAIFDTIMADRASRRQGTHDVKNRSEVSGGGKKPWRQKGTGRARAGSTRSPIWVGGGRA 260 Query: 85 FAARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL 143 F P+ ++S KVNKK+ R A S L+ L+ + +V++ F + TK KLK + + Sbjct: 261 FGPTPERNYSLKVNKKVRRAAFLSALT-LLSNKKSVVIDDFKMSKISTKDAVNKLKSLKI 319 Query: 144 ED---VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVE 197 E+ +L++T DE ++ + NL V + +L+ D +V++ + +K E Sbjct: 320 ENLKHILVVT--TDETVYKSTANLQNVLCVKPNSVSVENLVWADVLVLSNEGLKNFE 374 >UniRef50_Q2JV82 50S ribosomal protein L4 n=17 Tax=Cyanobacteria RepID=RL4_SYNJA Length = 326 Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 69/164 (42%), Positives = 102/164 (62%), Gaps = 7/164 (4%) Query: 38 GARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVN 97 ARQG KTRAEV G G+KPWRQKGTGRAR+GSI+SP+WR GGV F R ++++ +N Sbjct: 43 NARQGNAHTKTRAEVRGGGRKPWRQKGTGRARAGSIRSPLWRKGGVIFGPRKREYNLAMN 102 Query: 98 KKMYRGALKSILSELVRQDRLIVVEKF--SVEAPKTKLLAQK-LKDMALED--VLIITGE 152 +K + AL++ L V + LIVVE F + PKT+ +AQ L+ +ED L+I E Sbjct: 103 RKERQLALRTALQSRV--EDLIVVEDFQDQLNPPKTRAVAQALLRWGVMEDQSALLIVAE 160 Query: 153 LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 E + A RN+ +V + ++ L+ D V++T A++++ Sbjct: 161 RSEAVERAVRNIARVKLIGLDQLNVFDLLNVDWVLITTSALEKL 204 >UniRef50_Q4JT48 50S ribosomal protein L4 n=7 Tax=Actinomycetales RepID=RL4_CORJK Length = 217 Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 69/180 (38%), Positives = 103/180 (57%), Gaps = 6/180 (3%) Query: 19 FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW 78 F + + AL+HQVV A A RQGT A KTR V+G G+KP+RQKGTGRAR GSI++P + Sbjct: 26 FDAEASVALMHQVVTAQLAAKRQGTHATKTRGMVSGGGRKPFRQKGTGRARQGSIRAPHF 85 Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF-SVEAPKTK---LL 134 GG +P+D+SQ+ KKM AL+ L++ VR DR+ VVE+ + P TK Sbjct: 86 TGGGTVHGPQPRDYSQRTPKKMKAAALRGALTDRVRHDRIHVVEELVPGQTPSTKAARAF 145 Query: 135 AQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 ++L D + VL++ D + + NL +V ++ ++ D VV + +A+ Sbjct: 146 IERLTDR--KSVLVVLTREDVTAWKSVNNLPQVHTLVNDQLNTYDVLNADDVVFSVEALN 203 >UniRef50_B8IYH3 50S ribosomal protein L4 n=6 Tax=Desulfovibrionales RepID=RL4_DESDA Length = 210 Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 106/192 (55%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K +T++ F + +++ V A A R GT KTRA V+G G KPW+QKGT Sbjct: 11 KQESGEVTLASDVFEIEVRPEILNLVARAQMAAKRAGTHNVKTRAFVSGGGAKPWKQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR+GS +SPIWR G +TF P+D++ KVN K+ ALK LS + + L+VV+ Sbjct: 71 GRARAGSNRSPIWRGGAITFGPSPRDYTFKVNSKVRSLALKMALSSRLAAESLMVVKGIV 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + KTK A+ + L LI+ E + +L +ARN+ + + + + ++ + Sbjct: 131 LPEAKTKHFAKVADTLGLTKALIVAPEENADLTRSARNIPGLTLTTVDRLSVLEILKHKQ 190 Query: 186 VVMTADAVKQVE 197 +V+ AV+ V+ Sbjct: 191 LVLLEGAVESVQ 202 >UniRef50_B4CUX4 Ribosomal protein L4/L1e n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUX4_9BACT Length = 203 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 110/176 (62%), Gaps = 1/176 (0%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H V A A R GT + KT+A V GSG KPWRQKGTGRAR+G SP+W GGV F Sbjct: 27 VIHDTVTALRANRRSGTASVKTKATVNGSGAKPWRQKGTGRARAGYKSSPVWVGGGVVFG 86 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED- 145 P+D+S+KV K + + AL+ LSE ++ + +V++F+++ PKTK A + + E Sbjct: 87 PHPRDYSKKVAKSVKKLALRKALSERIKSGDVFIVDEFAIKEPKTKQFAAAIALITEEPK 146 Query: 146 VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 L+++ D+N +L+ARN+ + A+ ++ L+ F K+V+T D + Q+ + LA Sbjct: 147 TLVVSAAFDKNTYLSARNVQPAQLITASEVNTEQLLNFRKIVITNDGLAQIADRLA 202 >UniRef50_C7PU72 Ribosomal protein L4/L1e n=11 Tax=Bacteroidetes RepID=C7PU72_CHIPD Length = 212 Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 107/191 (56%), Gaps = 4/191 (2%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + E FG + N +++ V Y A RQGT KTRAEV G+ +K +QKGTG +R G Sbjct: 17 IELPEEIFGVEPNNHVIYLAVKQYLAAQRQGTHKVKTRAEVKGASRKLHKQKGTGGSRKG 76 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 +I++P+++ GG F +P + K+N+K+ A S LS +++ +IVVE +++ PKT Sbjct: 77 NIRNPLYKGGGTIFGPKPHKYDIKLNRKVKDLAKISALSTKAKENSIIVVEDLTLDTPKT 136 Query: 132 KLLAQKLKDMALE----DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 K A L ++ + L + E ++N++L+ RN+ VD + I+ ++ + +V Sbjct: 137 KAFAGILNNLKVNVSGRKTLFVLPEYNDNVYLSLRNIPTVDSVMLSDINTYEIMNSNVLV 196 Query: 188 MTADAVKQVEE 198 T A K E Sbjct: 197 FTESAAKIFTE 207 >UniRef50_A5IYY5 50S ribosomal protein L4 n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IYY5_MYCAP Length = 300 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 7/174 (4%) Query: 28 VHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAA 87 + +++ A RQGT K+RAEV G GKKPWRQKGTGRAR+GS +SPIW GG F Sbjct: 126 IFDTIISDRASRRQGTHDVKSRAEVRGGGKKPWRQKGTGRARAGSTRSPIWVGGGRAFGP 185 Query: 88 RP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED- 145 P +++ KVNKK+ A S+L+ L+ Q + +VV+ F +E+ TK KL ++ +++ Sbjct: 186 TPVRNYKLKVNKKVRFNAFVSVLT-LLAQSKAVVVDDFKLESISTKAAINKLSELGIKEQ 244 Query: 146 --VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVE 197 +LI T DE + + NL V T + +LI D +V++ + + E Sbjct: 245 KHILIATN--DEVTYKSVANLQNVICVKPTSVSVENLIWADVLVLSTEGYENFE 296 >UniRef50_Q7UN19 50S ribosomal protein L4 n=1 Tax=Rhodopirellula baltica RepID=RL4_RHOBA Length = 222 Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 106/174 (60%), Gaps = 2/174 (1%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H VVV Y A RQG+ +TR +V+G+ KK +RQKGTG AR+GS ++ + R GGV Sbjct: 32 LLHDVVVMYQANKRQGSHNTRTRGQVSGTNKKMYRQKGTGNARAGSKRTNVRRGGGVART 91 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED- 145 +P+D+S ++ KK + A + + + ++V+ + ++APKT +AQ LK++ L + Sbjct: 92 VKPRDYSYRLPKKAIKIATRMAIRSRIDDGEIVVINELKLDAPKTSQIAQILKNLGLANT 151 Query: 146 -VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 LI T D+ ++ + RN+ V V ++ ++L+ +V+ T +A+ +V++ Sbjct: 152 TTLIATAGDDQIIYKSGRNISGVTVEPVRQLNALTLLTPKRVLFTQEALDRVKD 205 >UniRef50_C1E7J4 Predicted protein n=2 Tax=Micromonas RepID=C1E7J4_9CHLO Length = 276 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 3/182 (1%) Query: 22 DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSG 81 D + LVH+ VV AR+GT + T++EV G G+KP++QKGTG AR+GS ++P+ G Sbjct: 87 DVAKGLVHKYVVMVRQNARRGTASTLTKSEVRGGGRKPFKQKGTGNARAGSSRTPLKPGG 146 Query: 82 GVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM 141 GV F +P+D S K+NKK R A+ + + +IVV+ + APKTK +A LK Sbjct: 147 GVVFGPKPKDWSIKMNKKERRLAMATAIQSAAAASSMIVVDSLAGAAPKTKAMATALKSW 206 Query: 142 AL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 + E IIT + E + L+ RN+ +V D ++ ++ DKVV+ A++ + + Sbjct: 207 GVAEGEKAYIITKDAPEGVTLSTRNMARVVQTDIKHLNVYDVLNADKVVVEESALQYIND 266 Query: 199 ML 200 Sbjct: 267 FY 268 >UniRef50_Q6KI54 50S ribosomal protein L4 n=1 Tax=Mycoplasma mobile RepID=RL4_MYCMO Length = 293 Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 62/151 (41%), Positives = 94/151 (62%), Gaps = 7/151 (4%) Query: 23 FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGG 82 N + ++ A RQGT + KTR+EV+G GKKPW+QKGTGRAR+GS +SPIW GG Sbjct: 114 INTQAIFDSILFERASQRQGTHSTKTRSEVSGGGKKPWKQKGTGRARAGSTRSPIWVGGG 173 Query: 83 VTFAARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM 141 +TF +PQ + K+NKK+ A S L+ L ++ I+VE +E ++ L +KL+D+ Sbjct: 174 ITFGPKPQKKYDFKINKKVRNLAFLSSLTLLANKN-AILVEDLKLEKISSQELIKKLEDL 232 Query: 142 A---LEDVLIITGELDENLFLAARNLHKVDV 169 L+ +LI++ DE +F + RN+ + V Sbjct: 233 KINNLKKILIVSD--DEKIFKSGRNVQNLHV 261 >UniRef50_A7RJ96 Predicted protein n=2 Tax=Metazoa RepID=A7RJ96_NEMVE Length = 299 Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 110/199 (55%), Gaps = 3/199 (1%) Query: 5 LKDAQS--ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 KD +S + +++ FG + ++H+VVV A R GT K R+EV G G+KPW Q Sbjct: 91 FKDDKSLGMIELNDFVFGENPRIDILHRVVVWQRAKRRAGTACVKDRSEVRGGGRKPWPQ 150 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KG +AR GSI++P +R GGV +P+ + + KK+ R L+ LS + Q L +VE Sbjct: 151 KGLNKARQGSIRAPHFRGGGVVHGPKPRSYEYTLPKKVRRMGLRVALSVRLAQGDLHIVE 210 Query: 123 KFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 F + + L L + +++ G +E LF AA +L KVDV + ++ S++ Sbjct: 211 SFD-DIEDDQDLMPILDQRGWQSAVLVDGSPNERLFEAAADLDKVDVFYSENVNVYSILL 269 Query: 183 FDKVVMTADAVKQVEEMLA 201 ++++ DAVKQ+EE L Sbjct: 270 RHNLILSLDAVKQLEERLG 288 >UniRef50_A8Z669 50S ribosomal subunit protein L4 n=3 Tax=Candidatus Sulcia muelleri RepID=A8Z669_SULMW Length = 207 Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 101/180 (56%), Gaps = 4/180 (2%) Query: 24 NEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGV 83 N ++ + Y + RQGT K R+E+TGS KK RQKG+G AR G IK+PI+RSGG Sbjct: 28 NNNILFLDIKRYLSAQRQGTNKSKERSEITGSTKKIQRQKGSGNARKGDIKNPIFRSGGR 87 Query: 84 TFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLK---- 139 F +P++ + K+N K A K+IL+ +R +++ V+E F KTKL+ + L Sbjct: 88 IFGPKPRNFNIKINNKSKFLAKKTILNFKLRTNKIKVIEDFKFNIIKTKLVFKILNRLNF 147 Query: 140 DMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 + ++ LII ++++ F ++RNL + ++ L D +V A+K++ ++ Sbjct: 148 NFNIKKSLIIYNKINDIFFFSSRNLKFTNFLSINELNSYELANSDYLVFFESAIKKILKL 207 >UniRef50_C9RR33 Ribosomal protein L4/L1e n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RR33_FIBSS Length = 206 Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 99/181 (54%), Gaps = 2/181 (1%) Query: 19 FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW 78 F ++ N+ ++ + A RQGT K++ EV+G G+KPW+QKGTGRARSG S +W Sbjct: 23 FDQEVNKVCMYLHIKAILNNNRQGTAQTKSKGEVSGGGQKPWKQKGTGRARSGQNTSAVW 82 Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKL 138 G + D+ +KVNKK+ + A S L+ + ++ V E S APKTK L L Sbjct: 83 VRGAKAHGPKSHDYFEKVNKKVKKIAFYSALANKASEGKVSVFEALSFSAPKTKDLLSVL 142 Query: 139 KDMALE--DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 +E +VL I E D+NL+L++ N+ ++ ++ + VV++ A+ ++ Sbjct: 143 AKSGIEQRNVLFIVSEKDQNLYLSSNNIPWCRCARVADVNTYDVVRANNVVISQAALAEL 202 Query: 197 E 197 E Sbjct: 203 E 203 >UniRef50_A9BCP6 50S ribosomal protein L4 n=25 Tax=cellular organisms RepID=RL4_PROM4 Length = 211 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 108/178 (60%), Gaps = 7/178 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H+ VV A +RQGT + TR+EV G G+KP++QKGTGRAR GSI++P+ GG+ F Sbjct: 32 LIHRAVVRQQAHSRQGTASTLTRSEVRGGGRKPYKQKGTGRARQGSIRTPLRPGGGIIFG 91 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVEAPKTKLLAQKLKDMALE 144 +P+ S +N+K R AL++ L + R + L++V+ F +++ PKT+ + + L + Sbjct: 92 PKPRSFSLGMNRKERRLALRTAL--MARINDLMIVQDFGTALKVPKTREIVEALSRFGIA 149 Query: 145 D---VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 D VLII + E + + RN+ +V V A ++ L+ + +V+ A+ ++E+ Sbjct: 150 DDAKVLIILAQPSEIIIRSVRNIERVKVIGADQLNVFDLLNANSLVIGEKALSTIKEV 207 >UniRef50_B7T1Y3 Ribosomal protein L4 n=1 Tax=Vaucheria litorea RepID=B7T1Y3_VAULI Length = 220 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/175 (36%), Positives = 102/175 (58%), Gaps = 5/175 (2%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H+ + RQGT KTRAEV G G+KPW+QKGTGRAR+GS +SP+WR GGV F Sbjct: 43 LLHRALQTQLTNERQGTSNTKTRAEVQGGGRKPWKQKGTGRARAGSNRSPLWRGGGVIFG 102 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQ---KLKDMAL 143 + + S K+N+K +R +L+ +L +Q + ++ ++ KTK + Q KL L Sbjct: 103 PKIKKFSNKINRKEWRLSLRLLLLN--KQKNITIINTIFLDFFKTKNIIQYILKLGIDPL 160 Query: 144 EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 + ++II DENL +NL V + A ++ ++ + + + +++K +EE Sbjct: 161 QKLVIIIPNYDENLRRGTKNLKNVQLLKANCLNIKDILKAEHIFIDINSLKIIEE 215 >UniRef50_Q1CRU2 50S ribosomal protein L4 n=81 Tax=Epsilonproteobacteria RepID=RL4_HELPH Length = 215 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 99/182 (54%), Gaps = 9/182 (4%) Query: 24 NEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGV 83 N ++ V Y + R T K RAEV+G G+KPW QKG GRAR+GSI SP++ GGV Sbjct: 27 NSHNLYLYVKHYLSSVRANTAKSKNRAEVSGGGRKPWAQKGGGRARAGSITSPVFVGGGV 86 Query: 84 TFAA-RPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS----VEAPKTKLLAQKL 138 + A ++++ K+NKK R AL+ L E + ++L VVEK + VE K K L ++ Sbjct: 87 SHGATNKRNYNLKINKKQKRLALEYALEEKAQANKLFVVEKIAIKGVVEDNKRKHLTKEA 146 Query: 139 KDM--ALE--DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 M ALE D L + +DE LA NL K + D ++ L AF VVM A + Sbjct: 147 NQMFQALEQRDTLFVCLNMDECTELAFSNLKKCLIIDVNELNAYLLAAFSSVVMEEAAFQ 206 Query: 195 QV 196 V Sbjct: 207 HV 208 >UniRef50_Q84U22 Plastid ribosomal protein L4 n=1 Tax=Chlamydomonas reinhardtii RepID=Q84U22_CHLRE Length = 243 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/197 (38%), Positives = 109/197 (55%), Gaps = 13/197 (6%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 Q AL V+E D + LVH+ +V ARQGT + TR+EV G GKKP+ QKGTG A Sbjct: 45 QLALKVAE-----DSAKGLVHRYLVMVQQNARQGTASTLTRSEVRGGGKKPYAQKGTGNA 99 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R GS SP++ GGVTF +P+D S +NKK R AL + L +IVVE + + Sbjct: 100 RRGSSVSPLFPGGGVTFGPKPKDWSISMNKKERRLALATALQSATAD--MIVVESLAGKL 157 Query: 129 PKTKL-----LAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 TK L +KL A+E VL+IT E ++ LA RN+ K+ + A+ I ++ Sbjct: 158 QDTKTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRNIAKLTMNTASAISVFDVLN 217 Query: 183 FDKVVMTADAVKQVEEM 199 D +++ +A+ V+ Sbjct: 218 ADHIIIEDEALAHVQSF 234 >UniRef50_C7MFF5 LSU ribosomal protein L4P n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MFF5_BRAFD Length = 312 Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 2/173 (1%) Query: 24 NEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGV 83 N L+HQVVVA A ARQGT KTRAEV G GKKPW+QKGTGRAR GS+++P + GG Sbjct: 32 NVPLIHQVVVAQQAAARQGTHKAKTRAEVRGGGKKPWKQKGTGRARQGSLRAPQFTGGGT 91 Query: 84 TFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK-FSVEAPKTKLLAQKLKDMA 142 P+D+SQ+ KKM AL+ LS+ R R+ VV + TK + Q L +++ Sbjct: 92 VHGPVPRDYSQRTPKKMKAAALRGALSDRARNGRVHVVSSLLEGDVASTKAVRQTLSNVS 151 Query: 143 LEDVLIITGELDENL-FLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 L++ D++L L++RNL V A ++ ++ D VV TA A++ Sbjct: 152 DRRHLLVVVRRDDDLGALSSRNLPTTHVLYADQVNTYDVMLSDDVVFTAGALE 204 >UniRef50_Q6UCS1 Ribosomal protein L4 n=1 Tax=uncultured marine alpha proteobacterium HOT2C01 RepID=Q6UCS1_9PROT Length = 229 Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 103/168 (61%), Gaps = 2/168 (1%) Query: 32 VVAYAAGARQGTRAQ-KTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQ 90 +V ++ ++ RA+ K R+EV G+ +K RQKG+G AR GS K+ I+RSGG+ R Sbjct: 58 LVRWSESNQKPLRARTKNRSEVKGTTQKLGRQKGSGGARHGSKKANIFRSGGMAHNLRGV 117 Query: 91 DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIIT 150 +K+ K+ + ALK I ++ ++ + LI+VE+ +E PKTK+LA+ L D+ LI+ Sbjct: 118 RSLKKMPKRTRQEALKHIFADKLKNNNLIIVEELKIEEPKTKILAKSLSDLNAHSALILE 177 Query: 151 GEL-DENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVE 197 G+ D N LA+RNL + + + L+ F+K++M+ +A++ +E Sbjct: 178 GDKPDNNFVLASRNLKNIKYSSINNFNALDLLGFEKLIMSKNALEILE 225 >UniRef50_D0MYG7 50S ribosomal protein L4 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MYG7_PHYIN Length = 277 Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 105/191 (54%), Gaps = 1/191 (0%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 ++++ FG ++ +VV A R GT KTR+EV+GS +KPW+QKG+GRAR Sbjct: 84 SISMDGEVFGAPDRVDILQRVVRWQLACRRAGTNKTKTRSEVSGSTRKPWKQKGSGRARV 143 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 G I++P WR G +D S + KK+ L+ LS +R+ +L +V+ V+ K Sbjct: 144 GDIRAPQWRGGYRVHGPVLRDFSYSLPKKVRAMGLRVALSTKLREGKLAIVDSLDVDITK 203 Query: 131 TKLLAQKLKDMALEDVLIITGELDENLF-LAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 TK + + L + L + GE E+ F LA RN+ VD I+ S++ D +++T Sbjct: 204 TKDMKKLLGGRGWDHALFVGGEEVESSFVLATRNIPHVDTLAQNKINVYSILQKDLLIIT 263 Query: 190 ADAVKQVEEML 200 DAVK +EE L Sbjct: 264 KDAVKYLEERL 274 >UniRef50_D2R5T8 Ribosomal protein L4/L1e n=4 Tax=Planctomycetaceae RepID=D2R5T8_9PLAN Length = 209 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/177 (39%), Positives = 110/177 (62%), Gaps = 5/177 (2%) Query: 23 FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGG 82 ++ L+H VVV Y A RQGT K R EV GS KK +RQKGTG AR+GS +S + R GG Sbjct: 28 ISQQLLHDVVVMYQANLRQGTHRTKGRGEVAGSTKKMYRQKGTGNARAGSRRSGVRRGGG 87 Query: 83 VTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMA 142 FA RP+D+S ++ +K + A + ++ + Q+ ++V+++ S+ APKTK +A LK + Sbjct: 88 HIFALRPRDYSYRLPRKAVQAATRMAIAHKLNQNSVVVIDELSMAAPKTKEVATILKTLG 147 Query: 143 L--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA---DAVK 194 L L+ T LD N++ +ARN+ KV V ++ +S++ K+++T DA+K Sbjct: 148 LAGASTLVTTAGLDVNVYKSARNIDKVTVSPVADLNALSVLMPRKMLVTKAALDAIK 204 >UniRef50_Q4A5C2 50S ribosomal protein L4 n=1 Tax=Mycoplasma synoviae 53 RepID=RL4_MYCS5 Length = 229 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/179 (37%), Positives = 109/179 (60%), Gaps = 10/179 (5%) Query: 28 VHQ-----VVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGG 82 VHQ +++ A RQGT K RA V+GSGKKPW+QKGTGRAR S +SPIW GG Sbjct: 47 VHQQAIFDSILSERASRRQGTHQVKNRAAVSGSGKKPWKQKGTGRARHSSRRSPIWVGGG 106 Query: 83 VTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM 141 F + +++S KVNKK+ + A +S L+ LV D+ ++VE F ++ TK L+QKLK + Sbjct: 107 RAFGPQSVKNYSLKVNKKVKQLAFRSALTMLV-NDKAVLVEDFKMDKISTKDLSQKLKSL 165 Query: 142 ALEDV--LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 ++ + +I+ E + +F ++ NL V A ++ +L+ D +++ +++K + E Sbjct: 166 NVDKLRHVILVSE-NATVFKSSANLKNVTTLKAHSLNVETLVRADVLLVENESMKLLTE 223 >UniRef50_B2XTF4 50S ribosomal protein L4 n=2 Tax=Heterosigma akashiwo RepID=B2XTF4_HETA2 Length = 231 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 108/193 (55%), Gaps = 23/193 (11%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H+ V +R G KTR+EV G G+KPW+QKGTGRAR+GS +SP+W+ GGVTF Sbjct: 36 LIHRAFVKQFIESRNGNANTKTRSEVRGGGRKPWQQKGTGRARAGSNRSPLWKGGGVTFG 95 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS-----------VEAPKTKLLA 135 + + + K+NKK +R AL+++L +++ + V++ FS KTK L Sbjct: 96 PKTKTYKIKLNKKEWRLALQTLL--FNKKNSIRVIKSFSETFERISKEQGSNPQKTKTLL 153 Query: 136 Q------KLKDMALED----VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 K++++ + +LI+ + NL ++NL +D+ A ++ SL+ Sbjct: 154 NFLNQFVKIRNLNSNNIRNKILIVVPKKSLNLISTSQNLKNIDIIAADNLNIKSLLDSKY 213 Query: 186 VVMTADAVKQVEE 198 +++ +++K +EE Sbjct: 214 ILLCTESLKIIEE 226 >UniRef50_Q9TLT3 50S ribosomal protein L4, chloroplastic n=1 Tax=Cyanidium caldarium RepID=RK4_CYACA Length = 219 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 108/177 (61%), Gaps = 3/177 (1%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 +VH+V +R+ T + KT+++V G GKKPW+QKGTGRAR+GSI+SP+WR GGV F Sbjct: 40 VVHRVFSIQNKLSREHTASTKTKSQVRGGGKKPWKQKGTGRARAGSIRSPLWRGGGVVFG 99 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLK--DMALE 144 +P++ K+NKK R AL ++LS + + ++ + T+ L + L+ +++L+ Sbjct: 100 PKPKNVFFKINKKEIRLALYTVLSNALPKTTVVSSLEGLPNFISTQALIKFLRSLNVSLD 159 Query: 145 D-VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 + VLI+ + + LFL+ RN+ + + A ++ S+I +V+T A+K + + Sbjct: 160 NRVLIVVEKKETPLFLSCRNIKNLALIQADHLNVKSVILAQSLVVTLQALKIIYKTF 216 >UniRef50_A4S817 Plastid ribosomal protein L4 large ribosomal subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S817_OSTLU Length = 251 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/197 (34%), Positives = 108/197 (54%), Gaps = 7/197 (3%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 SA T+ T + LVH+ VV AR+GT + T++EV G G+KP++QKGTG A Sbjct: 49 SSAATLELKTARAEVARGLVHKYVVMVRQNARRGTASTLTKSEVRGGGRKPFKQKGTGNA 108 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS--V 126 R+GS ++P+ GGV+F +P+D S K+NKK R A+ + L +IVV+ S + Sbjct: 109 RAGSSRTPLKPGGGVSFGPKPRDWSIKMNKKERRLAMATALQSAASA--MIVVDDISGNI 166 Query: 127 EAPKTKLLAQKLKDM---ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 AP T + L A E +IT + +EN+ +ARN+ +V D + ++ ++ Sbjct: 167 SAPGTNAFNKSLMAWGVGASEKAYVITKDANENVAKSARNIERVVQTDVSHLNVYDILNA 226 Query: 184 DKVVMTADAVKQVEEML 200 DKV++ A A+ + Sbjct: 227 DKVIVEASALAHISSFF 243 >UniRef50_Q8KTP1 Ribosomal protein L4 n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTP1_TREPR Length = 198 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 6/193 (3%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 S+ + + G L+ QV+ AY A R Q++R EV+ S +KPWRQKG GRAR Sbjct: 5 SSPYCNRPSHGSHAGYPLLRQVLNAYHASLRPSCSTQRSRGEVSHSTRKPWRQKGLGRAR 64 Query: 70 SGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 +G SP+WR GG F +R ++NK+M R +L + RQ RL +V+ + Sbjct: 65 AGMTSSPLWRGGGRAFPSRTAASRLVRINKRMARLSLHVQIVRAARQGRLAIVDALRIAP 124 Query: 129 PKTKLLAQKLKDMALEDVLIITG--ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 KT+ L A +++ G EL N + AARN+ + + GI P + ++ Sbjct: 125 SKTRELRC---ASAQPSTMVVVGKSELCYNAYRAARNVSGLSIVAQRGISPRAFHLSSRI 181 Query: 187 VMTADAVKQVEEM 199 VMT A + + M Sbjct: 182 VMTRKAAEDIATM 194 >UniRef50_Q2GL58 50S ribosomal protein L4 n=15 Tax=Rickettsiales RepID=RL4_ANAPZ Length = 208 Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 1/192 (0%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 ++ ++ FG + ++ +VV A R GT K ++++G+ KP+RQK TGRAR Sbjct: 15 SIDLNPQVFGLEPRRDVLKEVVNWQLAKRRAGTHKAKGISDISGTTAKPYRQKHTGRARQ 74 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 GS++SP +R G V F P+ H +NKK+ R LK LS V ++L+V++ V+ K Sbjct: 75 GSLRSPQFRGGAVIFGPVPRSHEYSLNKKVRRLGLKVALSMKVAANKLVVLDSLDVDLKK 134 Query: 131 TKLLAQKLKDMA-LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 T + A L+++ E + A RNL VD+ GI+ + ++ D V++T Sbjct: 135 TADAKGVFGNFAGHSSYLVVSESCKEEVVRACRNLRGVDLLKCVGINVLDILKHDCVILT 194 Query: 190 ADAVKQVEEMLA 201 D VK +E L+ Sbjct: 195 VDTVKSLEGRLS 206 >UniRef50_A5CCL1 50S ribosomal protein L4 n=18 Tax=cellular organisms RepID=RL4_ORITB Length = 210 Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 4/202 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 +L++ + + ++ + F + ++ V+ A GT KT + V+G+ KKP++QK Sbjct: 8 LLQEIEKEVELNPSVFCLKYRPDIIKLVIDWQLAKRMSGTHCTKTISGVSGTTKKPFKQK 67 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTG AR GS++S R GG++ + H V KK+ + ALK LS + ++LIVV+ Sbjct: 68 GTGNARQGSLRSVQMRGGGISHGPVVRSHEFDVPKKIRKQALKYALSYKLSVNKLIVVDD 127 Query: 124 FSVEAPKTKLLAQKLKDMALED----VLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 F++ + KT +L LK + I +D N FLA+RNL ++V G +P Sbjct: 128 FNIGSNKTAVLKNLLKKYNYSNYSGFFCIDDQNVDRNFFLASRNLFNLNVVAQIGANPYD 187 Query: 180 LIAFDKVVMTADAVKQVEEMLA 201 ++ D V++T A K +E LA Sbjct: 188 IMKHDCVMVTLSAAKSLEMRLA 209 >UniRef50_Q85FW2 50S ribosomal protein L4, chloroplastic n=1 Tax=Cyanidioschyzon merolae RepID=RK4_CYAME Length = 200 Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H+ + + RQ KTRAE+ G G+KPW+QKGTGRAR+GS +SP+WR GGV F Sbjct: 23 LLHRALRTHMLSIRQWGAHTKTRAEIRGGGRKPWKQKGTGRARAGSRRSPLWRGGGVAFG 82 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDV 146 R K+N+K R A K ++ + ++ +V +E P ++ ++Q L + V Sbjct: 83 PRGVAMECKLNRKESRKATK--IAFMACSKKIQIVNPPILEKPSSRTISQMLPPLPSRPV 140 Query: 147 LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 L I E + +L+L+ RN+ + + A I L+ ++ ++ +A+ +E L Sbjct: 141 LWILHEKNPSLWLSCRNIKTLQLIQAEHIYVKPLLWAKQIWISHEAIPILENQL 194 >UniRef50_A9T3B9 Predicted protein n=3 Tax=Embryophyta RepID=A9T3B9_PHYPA Length = 269 Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 110/193 (56%), Gaps = 7/193 (3%) Query: 13 TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGS 72 T++ F +VH+VV A RQGT + K EV+G+G+KP QKG+GRAR GS Sbjct: 73 TLAGDVFDVPIRPDVVHRVVRWQLAKRRQGTASTKGIHEVSGTGRKPGPQKGSGRARHGS 132 Query: 73 IKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP--K 130 ++ P +R G +P+ H + K++ R LK LS V + +L V + SVE P K Sbjct: 133 LRGPQFRGGATQHGPKPRSHEIGLQKQVRRLGLKVALSSRVAEGKLKVFD--SVEPPTLK 190 Query: 131 TKLLAQKLKDM-ALEDVLII--TGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 T+ + + + D+ + VLI+ ++E+L A NLH V+V A G++ S++ D +V Sbjct: 191 TREMERLIADIEGCKKVLIVDDAETVNESLCRATGNLHYVNVLPAKGLNVYSILQHDTLV 250 Query: 188 MTADAVKQVEEML 200 M+ A++++EE L Sbjct: 251 MSVGAIRRIEERL 263 >UniRef50_Q83FY7 50S ribosomal protein L4 n=7 Tax=Micrococcineae RepID=RL4_TROWT Length = 248 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 2/175 (1%) Query: 19 FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW 78 F D N L+HQVVVA A RQGT K+RAEV+GSG+KP+RQKGTG AR GS ++P Sbjct: 25 FDSDPNLHLIHQVVVAQQAAFRQGTHKTKSRAEVSGSGRKPFRQKGTGNARCGSTRAPQM 84 Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKL 138 R GGV P+++ + KKM + AL L+ R R+ +V+ F + P Sbjct: 85 RGGGVVHGPVPRNYVHRTPKKMIKAALAGCLTNRARAGRVHIVDSFG-DTPSVADALTLF 143 Query: 139 KDMALEDVLIITGELDENL-FLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADA 192 + L L++ + +++ + + RN+ V + ++ ++ D V+ T A Sbjct: 144 QITGLSSKLLVVAQASDSVAYRSVRNIPGVRLVHVGQLNSYDVLRSDDVLFTRGA 198 >UniRef50_B2S2D7 50S ribosomal protein L4 n=25 Tax=Spirochaetaceae RepID=RL4_TREPS Length = 216 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 1/193 (0%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 A ++ + E+ FG N +++ + + + R GT K R+EV GS KP++QKGTGR Sbjct: 12 ALRSVELDESVFGLSVNRGVIYYAINSELSNKRLGTACTKGRSEVHGSNTKPYKQKGTGR 71 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR G KSP+ GG F +P+D + KK+ R A+KS+LS + D L V+E F+VE Sbjct: 72 ARRGDKKSPLLVGGGTIFGPKPRDFHYALPKKVKRLAMKSLLSLKAQGDALTVIEDFTVE 131 Query: 128 APKTKLLAQKLKDMALEDVLIITGELDENLF-LAARNLHKVDVRDATGIDPVSLIAFDKV 186 + KT+ L Q L+ A + + + D+ L A RN+ + + L KV Sbjct: 132 SGKTRDLIQVLRHFAQRERTVFILQNDDALLKRAGRNIPTLSFLSYNRLRAHDLFYGRKV 191 Query: 187 VMTADAVKQVEEM 199 ++ AV ++ + Sbjct: 192 LVLETAVHKIADF 204 >UniRef50_B8KWG3 Ribosomal protein L4/L1e n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KWG3_9GAMM Length = 86 Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 49/76 (64%), Positives = 65/76 (85%) Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 +E PKTKLLA++LK LE+VLII+ E+D+NL+LA+RNLH+VDV D G++PVSL+AFDK Sbjct: 11 LEQPKTKLLAEQLKGFGLENVLIISSEVDKNLYLASRNLHRVDVSDVEGVNPVSLVAFDK 70 Query: 186 VVMTADAVKQVEEMLA 201 V++T DAVK+ EE LA Sbjct: 71 VLVTVDAVKKFEEALA 86 >UniRef50_Q8GM59 50S ribosomal protein L4 n=3 Tax=Mycoplasma RepID=Q8GM59_MYCHO Length = 322 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 119/197 (60%), Gaps = 10/197 (5%) Query: 10 SALTVSETTFGRD--FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 S+ + ++ FG + +N+A + +++ R T KTR EV+GSGKKPW QK TG Sbjct: 129 SSENLPKSVFGLEKIYNQA-IFDAILSERGSRRLATHKTKTRGEVSGSGKKPWDQKHTGN 187 Query: 68 ARSGSIKSPIWRSGGVTFAARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 AR+GS++SPI+ GG F + +++ K+NKK R AL S L+ L + D ++V+++S+ Sbjct: 188 ARAGSLRSPIFVGGGKVFGPTTERNYNLKINKKTRRNALLSALTLLAK-DHAVLVKEYSL 246 Query: 127 EAPKTKLLAQKLKD---MALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 T+ L KL + +L VL+++ +E +FL+ARNL V V T + SL+A Sbjct: 247 SKISTRELLIKLNEDKIASLNKVLLVSN--NETVFLSARNLPNVTVTKVTSLSVESLLAA 304 Query: 184 DKVVMTADAVKQVEEML 200 D +V+++D VK +E ++ Sbjct: 305 DVLVISSDDVKYLEGLV 321 >UniRef50_O46895 50S ribosomal protein L4, chloroplastic n=1 Tax=Guillardia theta RepID=RK4_GUITH Length = 223 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 7/180 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H+V+ R G KTR+EV G GKKPW+QKGTG AR+GS SP+W+ GGVTF Sbjct: 42 LLHRVLTNQLINNRSGNACTKTRSEVEGGGKKPWKQKGTGNARAGSSNSPLWKGGGVTFG 101 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED- 145 +P+ S K NKK AL + L ++I ++ KT+ L K ++ +E+ Sbjct: 102 PKPRTFSNKTNKKERLLALTTALYLKSNNTKVINLDNLDFTNLKTRDLVIKCSNL-IENY 160 Query: 146 -----VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 +L + L+ +N+ VD+ TG+D ++ ++ T A+ V+E+ Sbjct: 161 KKDQKILFVAEPTASGLWRYVKNISNVDLIYTTGLDLKKILQAHHIIFTCKALNDVKEVF 220 >UniRef50_B3QY25 50S ribosomal protein L4 n=15 Tax=Bacteroidetes/Chlorobi group RepID=RL4_CHLT3 Length = 210 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 100/185 (54%), Gaps = 2/185 (1%) Query: 19 FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW 78 F + N+ ++ V + A QGT KTR+EV+G G+KP+RQKGTG AR GS +SP+ Sbjct: 24 FEIEPNDHAIYLDVRSIMANQHQGTHKVKTRSEVSGGGRKPYRQKGTGNARRGSSRSPVM 83 Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKL 138 GG F +P D+ +NKKM R A S LS + + +IV+E + KTK + L Sbjct: 84 IGGGAIFGPKPHDYVVGINKKMKRLARISALSYKAKNNEIIVMEDYVPSEIKTKEVVSFL 143 Query: 139 KDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 K + L + L++ ++ ++ + RN+ K+ + +A L+ +++ A++ + Sbjct: 144 KSLGLNEKKTLLLMPSKNDVMYKSGRNISKLSILEANKASTYDLLNNKTLLIQKSALETL 203 Query: 197 EEMLA 201 E L Sbjct: 204 ERSLG 208 >UniRef50_A5USI8 LSU ribosomal protein L4P n=8 Tax=Chloroflexi RepID=A5USI8_ROSS1 Length = 223 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 100/183 (54%), Gaps = 1/183 (0%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + +S+ FG + N ++HQ + A AR GT R EV GS +K +RQKGTGRAR G Sbjct: 16 IQISDYVFGIEPNVPVMHQAMERQRANARLGTHNTLGRGEVEGSTRKLYRQKGTGRARQG 75 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 SI++P + GG+ P+ +++ + +KM R A++S LS R + +++ + E P+T Sbjct: 76 SIRAPHRKGGGIAHGPHPRKYTKAMPRKMRRLAVRSALSARYRDGAITFLDRLTFEKPRT 135 Query: 132 KLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 K + L + L LI+ + DE + +A NL V A ++ + L+ D +VM Sbjct: 136 KDMIAVLNALNLTGKTLIVLDQKDEYVRRSANNLPNVKTLLAHYLNVIDLLTHDHIVMLQ 195 Query: 191 DAV 193 AV Sbjct: 196 AAV 198 >UniRef50_D0LIC4 Ribosomal protein L4/L1e n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIC4_HALO1 Length = 215 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 99/193 (51%), Gaps = 4/193 (2%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + + F + +E L +VV A R GT + K R EV GS KP+RQKGTGRAR G Sbjct: 17 IDLDDAIFAEEVHEHLFWEVVKWQRARRRAGTHSTKRRGEVRGSNIKPYRQKGTGRARQG 76 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 K+P W GG F +P+ + + KK+ + AL+S LS ++ +L+V++ F VE KT Sbjct: 77 DRKAPHWVGGGSVFGPKPRSYDYALPKKVRKKALRSALSLRAKEQKLVVLDAFPVEGGKT 136 Query: 132 KLLAQKLKDMAL----EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 + + L + VLI+ + +L RNL G++ ++ +V Sbjct: 137 RNVVSALAALGAAHTDNRVLIVDAGDNLDLIRGTRNLRGSKWLAPEGLNVYDILDHSTLV 196 Query: 188 MTADAVKQVEEML 200 MT+ VK VE L Sbjct: 197 MTSATVKAVERAL 209 >UniRef50_B3E0I5 50S ribosomal protein L4 n=1 Tax=Methylacidiphilum infernorum V4 RepID=RL4_METI4 Length = 222 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 114/201 (56%), Gaps = 7/201 (3%) Query: 1 MELV-LKDAQS-ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKK 58 MEL+ ++ AQ LT+ ET RD ++H +V Y A +R GTRA KT+A V SGKK Sbjct: 8 MELLTIEKAQDYGLTLPETG-QRD---QVLHDALVGYLANSRSGTRATKTKATVKASGKK 63 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRL 118 PWRQKGTGRAR+G + SP+W GGV F +P+D S+ + KK+ AL + VR + + Sbjct: 64 PWRQKGTGRARAGYVSSPVWVGGGVVFGPQPRDFSKNIPKKIKGLALLKAFAAKVRSEEV 123 Query: 119 IVVEKFSVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 +EK + KTK + L+ E L+I N+ L+ RN+ + + A ++ Sbjct: 124 YCLEKVEMTEIKTKKMLSLLEGWDGKESGLLILKNPSRNVLLSGRNIPHLGIVRAQDVNA 183 Query: 178 VSLIAFDKVVMTADAVKQVEE 198 + L+ F KV + A++ + E Sbjct: 184 LDLLGFKKVFLERPAIEVLVE 204 >UniRef50_Q4EE76 Ribosomal protein L4/L1 family n=1 Tax=Listeria monocytogenes str. 4b H7858 RepID=Q4EE76_LISMO Length = 149 Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 90/134 (67%), Gaps = 3/134 (2%) Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 S SI+SP WR GGV F P+ ++ K+ KK+ R A+KSILS V +++L+V+E + +AP Sbjct: 17 SSSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDAP 76 Query: 130 KTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 KTK A LK+++++ ++++ GE EN+ L+ARNL + V A I + + DK++ Sbjct: 77 KTKEFAAFLKNISVDTKALIVVAGE-SENVELSARNLQGITVIPAESISVLEVAKHDKLI 135 Query: 188 MTADAVKQVEEMLA 201 +T AV++VEE+LA Sbjct: 136 ITKAAVEKVEEVLA 149 >UniRef50_A8IAS4 Ribosomal protein L4/L1e n=4 Tax=Alphaproteobacteria RepID=A8IAS4_AZOC5 Length = 207 Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 5/202 (2%) Query: 1 MELVLKDAQSA----LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 MEL +K A + +S+ FG + ++H++V A + GT K R+E+ + Sbjct: 2 MELTVKTLDGAEAGSIQLSDAIFGLEPRADILHRMVTWQLARRQAGTHRTKGRSEINRTS 61 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KK ++QKGTG AR G+ +P +R GG F + H+ + KK+ ALK LS + + Sbjct: 62 KKLYKQKGTGNARHGAASAPQFRGGGRAFGPVVRSHAFDLPKKVRALALKHALSSKAKAE 121 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGE-LDENLFLAARNLHKVDVRDATGI 175 ++IV++ ++ KTK L ++ + + + VL++ GE + N LAARNL VDV GI Sbjct: 122 QIIVLDAATLTDAKTKALKERFEKLGIASVLVVDGEQVATNFALAARNLASVDVLPVQGI 181 Query: 176 DPVSLIAFDKVVMTADAVKQVE 197 + ++ D +V+T AV +E Sbjct: 182 NVYDILRRDTLVLTRAAVDALE 203 >UniRef50_A5KRQ2 Ribosomal protein L4/L1e n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRQ2_9BACT Length = 199 Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 103/192 (53%), Gaps = 6/192 (3%) Query: 13 TVSETTFGRDF-NEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 T+ +T F D N L+ AY A AR + K R EV G G+KP +QKGTGRAR+G Sbjct: 5 TLPKTVFAVDVPNHELLKLAYEAYLAEARTSAASTKKRGEVRGGGRKPHKQKGTGRARAG 64 Query: 72 SIKSPIWRSGGVTFA-ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 SI+SP+WR GGVTF + +++ +++N K R A++ L+ L Q I+ S K Sbjct: 65 SIRSPLWRGGGVTFGPSGNENYKKQLNVKAKRVAVRQALT-LAAQAGKIITADVSATG-K 122 Query: 131 TKLLAQKLKDMA--LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 TK + LKD + L++ E L A NL +++ AT + ++ DK++M Sbjct: 123 TKDMTAFLKDQKADVRRTLLVVSEKSPELIRATGNLQNIELVRATYLSVFHVLNADKIIM 182 Query: 189 TADAVKQVEEML 200 T A+ +E L Sbjct: 183 TPTAITAIEAWL 194 >UniRef50_Q8EUB4 50S ribosomal protein L4 n=1 Tax=Mycoplasma penetrans RepID=RL4_MYCPE Length = 213 Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 103/183 (56%), Gaps = 10/183 (5%) Query: 23 FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGG 82 FN LV + A +RQ T + T+AEV G G+KP++QK TGRAR GSI++P + GG Sbjct: 37 FNSVLVEE------ANSRQSTASTLTKAEVRGGGRKPYKQKHTGRARQGSIRNPHYVGGG 90 Query: 83 VTFAARPQ-DHSQKVNKKMYRGALKSILS-ELVRQDRLIVVEKFSVEAPKTKLLAQKLKD 140 F P+ +++ K N K Y+ A +S ++ +L Q ++V K ++ P TK +++ LK Sbjct: 91 RAFGPSPEKNYTLKQNSKAYKLAFQSAMTLKLNEQGLNLLVNKIDMKEPSTKTISKMLKK 150 Query: 141 MALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 ++ E+ VL + + +EN + +N+ KV + + ++ D V+ DA ++ E Sbjct: 151 VSYENKKVLFVINDKNENFLKSCKNIQKVTSKMWNQVSVRDILNSDIAVIQEDAFDKISE 210 Query: 199 MLA 201 + A Sbjct: 211 VFA 213 >UniRef50_B5Y986 Ribosomal protein L4/L1 family n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y986_COPPD Length = 208 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 17/212 (8%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALV---------HQVVVAYAAGARQGTRAQKTRAE 51 M+L + D A E D NE LV H VV +G R GT + K + E Sbjct: 1 MQLPVFDVNGAEVAYE-----DVNENLVATPVRGRLLHLNVVRVLSGKRHGTASTKKQGE 55 Query: 52 VTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSE 111 V GS +KPW QK TGRAR G ++SPIWR G V F +P+D ++ VNKK + A+ S Sbjct: 56 VAGSTRKPWPQKHTGRARHGYMRSPIWRKGAVAFGPKPRDWTKDVNKKQVKLAMASCFGY 115 Query: 112 LVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDV 169 ++ L++++ S KT+ L+ L++ V +++ ++ + A +NL V Sbjct: 116 RLKNGELLLIDANSFNG-KTREFKAFLRSKQLDEKRVTVVSLAGEQGVRRACQNLENVYY 174 Query: 170 RDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 ++ L+ D V+MT A + +E+ A Sbjct: 175 VPVEKVNAYDLLKGDAVIMTQSAWVRAQEVWA 206 >UniRef50_A6GCH8 50S ribosomal protein L4 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCH8_9DELT Length = 218 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 64/189 (33%), Positives = 101/189 (53%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + VS+ F + E L+ +VV A R GT K R+EV G+ K +RQKGTG AR G Sbjct: 17 IEVSDEVFAAEVKEHLLWEVVRWQRAKKRAGTAKTKERSEVHGTRSKMYRQKGTGNARHG 76 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 S + ++R GG RP+D++ VNKK GAL+S LS + L+V+ F V KT Sbjct: 77 SRRVNVFRGGGQVHGPRPRDYTFSVNKKARAGALRSALSLRASEGNLVVIRDFEVPDAKT 136 Query: 132 KLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTAD 191 + LA L + L++ G + +L +ARNL G++ ++ F K++++ Sbjct: 137 RNLAAALGKLNAPKSLLVDGGDNMSLARSARNLPTAQHIVPEGVNVYDILRFPKLLISES 196 Query: 192 AVKQVEEML 200 +++ +E L Sbjct: 197 SLRALEARL 205 >UniRef50_Q601L4 50S ribosomal protein L4 n=6 Tax=Mycoplasma RepID=RL4_MYCH2 Length = 214 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 3/169 (1%) Query: 32 VVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQ- 90 +++ A R T K RAEV+G+GKKPW+QK TG+AR+GS +SPI+ GG F Q Sbjct: 45 ILSERASKRLSTHKVKNRAEVSGTGKKPWKQKSTGKARAGSKRSPIFVGGGRAFGPTTQR 104 Query: 91 DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDV-LII 149 +++ KVNKK+ + A S LS+L Q++ I+V FS+ TKLL +LK ++ + I+ Sbjct: 105 NYNLKVNKKVKKLAFISALSQLA-QNQQILVNDFSMNKISTKLLVDQLKIFKIDQLRHIL 163 Query: 150 TGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 D NLFL+ARNL V++ + SLI D ++++ + + +E+ Sbjct: 164 IASSDPNLFLSARNLPNVELVKTNSLTVESLIKADLLIISKNEITNLEK 212 >UniRef50_B0VI30 50S ribosomal protein L4 n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI30_9BACT Length = 211 Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 104/191 (54%), Gaps = 4/191 (2%) Query: 14 VSETTFGRDFN--EALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + E F D N + L+++VV + A RQGT +K R+ GS +K +RQKGTG AR G Sbjct: 19 LPEGIFEVDVNAPKILLNEVVTMFLANQRQGTVQKKNRSMTAGSTRKLFRQKGTGNARVG 78 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 + +SPI GG FA P+D +K+ + R ALK L++ R+ R+++V+ S E P T Sbjct: 79 TRRSPIRVHGGKAFAIYPKDWYRKIPRTKKRLALKVALTDRAREGRIMIVDNLSFEKPNT 138 Query: 132 KLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 KL + L + E LI+T + NL +V A ++ ++ ++MT Sbjct: 139 KLAVELLNKIIPEKGYKLIVTDGHHIPTVKSFANLPEVMTDRADSLNAYEVLKSSYIIMT 198 Query: 190 ADAVKQVEEML 200 +A+K+VEE+ Sbjct: 199 DEALKKVEEVF 209 >UniRef50_Q6ME62 Putative 50S ribosomal protein L4 n=3 Tax=Parachlamydiaceae RepID=Q6ME62_PARUW Length = 196 Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 106/195 (54%), Gaps = 21/195 (10%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++ +VA A ARQ + + KTRAEV + KK QKG GRAR GS +P +R GG F Sbjct: 1 MIKDYIVALRANARQWSASTKTRAEVKHTTKKAHPQKGQGRARHGSTVAPQYRGGGRAFG 60 Query: 87 ARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED 145 RP+ D ++NKK + A++ +LSE ++++++ ++E +++APKTK LAQ L+ L Sbjct: 61 PRPKFDQHVRINKKERKAAIRFLLSEKLKENKVWLIEDTAMDAPKTKTLAQFLRGFDLRG 120 Query: 146 VLIITGEL-------------------DENLFLAA-RNLHKVDVRDATGIDPVSLIAFDK 185 ++ GE N F+ + RNL + + A+ I+ ++ + Sbjct: 121 RVLFLGETTFTDVETEGKVQRVSISTDKHNHFVKSMRNLPRANFMLASNINGYDVMIARE 180 Query: 186 VVMTADAVKQVEEML 200 +V+T A+ ++ + L Sbjct: 181 IVLTESALNELNQWL 195 >UniRef50_P61061 50S ribosomal protein L4 n=1 Tax=Bdellovibrio bacteriovorus RepID=RL4_BDEBA Length = 209 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 103/191 (53%), Gaps = 1/191 (0%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K+ ++ ++ F + ++H VV A RQGT KT+ V+G GKKP++QKGT Sbjct: 11 KEKVGSVELAADVFETPVKKEVLHTVVQWQLAARRQGTHMTKTKGLVSGGGKKPFKQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 G AR GS +S + GG F +P+ ++ + KK+ R L LS L ++ +L +V+ + Sbjct: 71 GGARQGSSRSILMPGGGTAFGPQPRSYAFVLPKKVRRLGLSMALSHLQKEGKLFIVDSMA 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 E KT L ++L+ L+ +++ +D+ A++NL G++ L+ +D Sbjct: 131 SEG-KTAELNKRLQAFGLKKAVLVDSVVDDKFNRASKNLPTFKYFPVEGLNVFDLLKYDA 189 Query: 186 VVMTADAVKQV 196 V+T D+V ++ Sbjct: 190 AVITKDSVAKI 200 >UniRef50_D2IS95 Ribosomal protein L4 n=1 Tax=Cryptomonas paramecium RepID=D2IS95_9CRYP Length = 214 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 94/167 (56%), Gaps = 9/167 (5%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 Q +T++ T + ++ H+++ R T KTRAEV G G+KPW+QKGTGRA Sbjct: 21 QPTITLNLKTCA-EVSKFFFHRILTIQNKNQRCKTACSKTRAEVRGGGRKPWKQKGTGRA 79 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SV 126 R+GS SP+W+ GGV F +P +++K+N K + A+ + L ++++V F S+ Sbjct: 80 RAGSSVSPLWKGGGVVFGPKPTVYNKKINFKERQLAIFTGLYAC--SYKIVIVRNFVSSI 137 Query: 127 EAPKTK----LLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDV 169 P+TK LL+ + + +LI+ + E L+ + RN+ K+ + Sbjct: 138 AQPRTKAFLGLLSSFDPSLLSKRILILVPKATETLYSSCRNVEKITI 184 >UniRef50_C6XLG6 Ribosomal protein L4/L1e n=7 Tax=Alphaproteobacteria RepID=C6XLG6_HIRBI Length = 309 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 110/201 (54%), Gaps = 4/201 (1%) Query: 1 MELVLKDAQSALTV--SETTFGRDFNEALVHQVVVAYAAGARQ-GTRAQKTRAEVTGSGK 57 ++++ DA+ A +V ++ FG + + Q +V Y RQ GT +TR+EV + Sbjct: 3 LDVINLDAKKAGSVELNDAVFGIEDVRPDILQRMVRYQLAKRQAGTHKTQTRSEVNKTKT 62 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 + RQKG G AR GS +PI+ GGV + + H+ + KK ALK LS V+ Sbjct: 63 RFGRQKGGGGARHGSRNAPIFVGGGVAHGPKVRSHAHDLTKKFRALALKHALSAKVKDSS 122 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGE-LDENLFLAARNLHKVDVRDATGID 176 LIV+E+ +V KTK L + + + L++ L+I GE LD+N AARN+ +DV G++ Sbjct: 123 LIVLEEAAVSEVKTKALRAQFEALGLKNALVIGGESLDDNFAKAARNIPNIDVLPFAGLN 182 Query: 177 PVSLIAFDKVVMTADAVKQVE 197 ++ +V+T +AV V Sbjct: 183 VYDVMRRHTLVLTKEAVDAVH 203 >UniRef50_B0CPN7 Predicted protein n=2 Tax=Agaricales RepID=B0CPN7_LACBS Length = 253 Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 2/193 (1%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 S + + T F ++H V Y RQG+ KTR EV GSG K RQKGTGRAR Sbjct: 40 SLVVLDPTVFNHPIRRDVLHLCVTHYLDSLRQGSANTKTRGEVRGSGAKLHRQKGTGRAR 99 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 G +SPI GGV F +P+D S K+ +K+ ++ LS +++ ++ ++ Sbjct: 100 VGDGQSPIRVGGGVAFGPKPRDFSTKLPRKVIEMGMRVALSVKMKERQVGIMASLDWPNA 159 Query: 130 KTKLLAQKLKDMALEDVLIITGE--LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 KT+ L QK+ + L L +TGE + L A N+ V V A ++ ++ + ++V Sbjct: 160 KTRNLVQKIDLLGLRKTLFVTGEGVVPAGLKQAMANIPLVQVITADEVNVYEIMKWQRLV 219 Query: 188 MTADAVKQVEEML 200 + AV+ E L Sbjct: 220 LDVKAVEFFERTL 232 >UniRef50_Q7XYP3 Ribosomal protein rpL4 (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XYP3_BIGNA Length = 335 Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 8/183 (4%) Query: 25 EALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVT 84 + LVH+ ++ R GT + KT++EV G GKKP++QK TG AR GS ++P+ GG+ Sbjct: 140 KGLVHRYLMYARNSMRAGTASTKTKSEVRGGGKKPYQQKKTGNARQGSRRTPLKPGGGII 199 Query: 85 FAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS--VEAPKTKLLAQKLKDMA 142 F +P+D S +N+K R A+ + L +I+VE E+PKTK +A L + Sbjct: 200 FGPKPRDWSVDMNQKERRIAMATALQSA--SSDVILVEDLDGKFESPKTKNMADFLDRVG 257 Query: 143 L----EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 E VL++ N L+ARN+ K+ + T + + ++ DK++M A + ++ Sbjct: 258 AKPSEEKVLLVVEGQKRNALLSARNIDKLKINKPTSLRIIDVLGADKIIMEKKAFETMKN 317 Query: 199 MLA 201 + Sbjct: 318 IFG 320 >UniRef50_A5FZW4 50S ribosomal protein L4 n=180 Tax=Alphaproteobacteria RepID=RL4_ACICJ Length = 216 Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 90/161 (55%), Gaps = 1/161 (0%) Query: 40 RQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKK 99 R GT K EV+G+ KKP+RQKGTG AR GS+++P +R+GG +DH +NKK Sbjct: 44 RAGTHKVKGMGEVSGTTKKPYRQKGTGNARQGSLRAPQFRTGGAVHGPVVRDHGYSLNKK 103 Query: 100 MYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFL 159 + R L S LS+ + + +L+V++ + KT L KLK + L++ +DE Sbjct: 104 VRRLGLISALSQKLAEGKLVVLDTVA-GVSKTSELNVKLKKLGWGRTLVVDAVVDEGFAR 162 Query: 160 AARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 A+RNL +DV G + ++ D + +TA ++ ++ L Sbjct: 163 ASRNLIGIDVLPVVGANVYDILQHDTLAITAAGLEGLKRRL 203 >UniRef50_B1AIM1 50S ribosomal protein L4 n=15 Tax=Mycoplasmataceae RepID=RL4_UREP2 Length = 211 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 85/143 (59%), Gaps = 4/143 (2%) Query: 32 VVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-Q 90 V+A A RQGT + T+ EV G GKKPWRQK TG+AR+GS ++P W GGV F +P + Sbjct: 37 VLAENAAERQGTHSTLTKGEVRGGGKKPWRQKHTGKARTGSTRNPHWTGGGVVFGPKPNR 96 Query: 91 DHSQKVNKKMYRGALKSILSELVRQDRLI-VVEKFSVEAPKTKLLAQKLKDMALED--VL 147 +++ KVN K+ A KS L+ + + +++ +V +E P TK + + + LE+ VL Sbjct: 97 NYNLKVNAKVRLLAFKSALTIKLNEGKMLGLVANSDLETPSTKKMVNFINNANLENQKVL 156 Query: 148 IITGELDENLFLAARNLHKVDVR 170 ++ + N+ + NL KV + Sbjct: 157 LVIVDNFSNIKKSTNNLQKVTTK 179 >UniRef50_P75579 50S ribosomal protein L4 n=2 Tax=Mycoplasma RepID=RL4_MYCPN Length = 212 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 5/189 (2%) Query: 14 VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSI 73 +S ++ + V V+ A RQGT + T+ EV G GKKP++QK TG+AR GS Sbjct: 20 LSPGLIAKELKQQPVFDAVLVEQASWRQGTHSILTKGEVRGGGKKPYKQKHTGKARQGST 79 Query: 74 KSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK--FSVEAPK 130 ++P + GG+ F +P +++S K+NKK + AL ++ SE + D +V++ F+ K Sbjct: 80 RNPHFVGGGIVFGPKPNRNYSLKLNKKAHTAALHTVWSEKLASDNTHLVDQNLFNKTEGK 139 Query: 131 TKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 TK++ Q LK L D VL + L+ NL + N+ V V+ + L+ + +++ Sbjct: 140 TKVMMQFLKSAKLLDKNVLFVVNTLNTNLEQSTSNIKNVQVKHLDKVSVRDLMLANALLV 199 Query: 189 TADAVKQVE 197 + +K +E Sbjct: 200 EKEVLKALE 208 >UniRef50_Q252V4 50S ribosomal protein L4 n=15 Tax=Chlamydiaceae RepID=RL4_CHLFF Length = 224 Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 11/152 (7%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 LV +VA A RQ + + R+EV+ S KKP+RQKGTG AR G + +P +R GG+ F Sbjct: 33 LVKDYIVAIRANKRQWSACTRNRSEVSHSTKKPFRQKGTGNARQGCLAAPQFRGGGIVFG 92 Query: 87 ARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF----SVEAPKTKLLAQKLKDM 141 +P+ D ++NKK R A++ +LS+ ++ +RLIV + S+ APKTK + LK Sbjct: 93 PKPKFDQHVRINKKEKRAAIRLLLSQKIQTNRLIVADDSVFTKSLTAPKTKEALRFLKSC 152 Query: 142 ALE--DVLII----TGELDENLFLAARNLHKV 167 +E VL I + +E L L+ RNL V Sbjct: 153 NVECRGVLFIDDLNHAQNNEGLRLSLRNLPAV 184 >UniRef50_Q0FQD6 50S ribosomal protein L4 (Fragment) n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FQD6_9RHOB Length = 177 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/163 (36%), Positives = 94/163 (57%), Gaps = 2/163 (1%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 A + +++ F + ++H+VV A+ GT KTR+EV+ S KK +RQKGTG Sbjct: 12 AAGEVELTDEIFDLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYSTKKIYRQKGTGG 71 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR GS K+PI+R GG+ P+ H+ + KK+ + LK LS + L+++E + Sbjct: 72 ARHGSRKAPIFRKGGIYKGPTPRSHAHDLPKKVRQLGLKLALSAKAKAGSLVIIENADAD 131 Query: 128 APKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDV 169 KTK LA ++K++ + L+I G E++EN AA N+ +DV Sbjct: 132 G-KTKTLASQVKNLGWKRALVIDGAEVNENFARAAANIDGLDV 173 >UniRef50_Q1IX73 50S ribosomal protein L4 n=10 Tax=Bacteria RepID=RL4_DEIGD Length = 213 Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 101/181 (55%), Gaps = 6/181 (3%) Query: 22 DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSG 81 + N ++H+VV AG R+GT + KTRAEV+ SGKK + QKGTG AR G P + G Sbjct: 21 EVNPHVLHEVVTWQLAGRRRGTASTKTRAEVSRSGKKMYSQKGTGNARHGDRSVPTFVGG 80 Query: 82 GVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM 141 GV F +P+ +S + +K+ + L L++ +Q +L V+ F ++ KTK K+ Sbjct: 81 GVAFGPKPRSYSYTLPRKVRQLGLAMALADRQQQGKLTAVDGFGLDG-KTKSFVSWAKEN 139 Query: 142 AL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 L E VLI+T DE AARN+ V G++ ++ +++V+ A A++ +E Sbjct: 140 GLDGSERVLIVTD--DELTRRAARNVAWATVLPVAGLNVYDILRHERLVIDAVALEPAQE 197 Query: 199 M 199 + Sbjct: 198 L 198 >UniRef50_Q1AU30 50S ribosomal protein L4 n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RL4_RUBXD Length = 211 Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 5/192 (2%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 +S + + F + + ++H+ VVA R+ T + + R+EV GSG K +RQKGTGRA Sbjct: 14 RSEMELKGPRFETEPKQHVIHRAVVAELEARRRWTASTRERSEVAGSGAKLYRQKGTGRA 73 Query: 69 RSGSIKSPIWRSGGVTFAARPQD--HSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 R+G IKSP+ GG +P+ + +K+N+K R A LS + RL V++ Sbjct: 74 RAGDIKSPLRHGGGTWGGPKPKGPRYGKKINRKEARAAFDGALSAKAAEGRLYVLDALDF 133 Query: 127 EAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 E P TK + L M +E +L++ GE E L+ RNL +V V G L+ Sbjct: 134 ERPSTKRAKELLGQMGVEGPVLLVLDGEEREAA-LSFRNLPEVTVVGPRGYGVYELLRAR 192 Query: 185 KVVMTADAVKQV 196 +VV + A ++ Sbjct: 193 EVVFSRAAYGRL 204 >UniRef50_Q2GED8 50S ribosomal protein L4 n=2 Tax=Neorickettsia RepID=RL4_NEOSM Length = 214 Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 4/175 (2%) Query: 23 FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGG 82 F L+ V+ A R GT K +EV+G+ +KP+RQKGTGRAR GS+++P +R GG Sbjct: 31 FRPDLLSLVINWQLAKRRAGTHKTKGISEVSGTTRKPYRQKGTGRARQGSLRAPQFRKGG 90 Query: 83 VTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMA 142 + F + H VNKK+ AL+S LS + RL V+E + K L + A Sbjct: 91 IVFGPVVRQHGFSVNKKVRSLALRSALSMRFAEGRLFVLESSRLGESKAATLLKWFASNA 150 Query: 143 LEDV----LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAV 193 V LI+T E +E L AA NLH V V + + ++ D V++ +V Sbjct: 151 ELSVGKKFLIVTEEKNEGLLRAASNLHWVKVLWGSSANVYDVVLHDFVLLEKASV 205 >UniRef50_A8J5Z5 Mitochondrial ribosomal protein L4 (Fragment) n=4 Tax=cellular organisms RepID=A8J5Z5_CHLRE Length = 124 Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 43/96 (44%), Positives = 63/96 (65%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H+VV + A +QGT K+RAEV+G GKKPW QK TGRAR GSI+SP+W+ GGV+ A Sbjct: 27 ILHRVVRYWRAKWQQGTHKAKSRAEVSGGGKKPWNQKKTGRARQGSIRSPLWKGGGVSHA 86 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 RP+ H+ + + ++ LS + + R VV+ Sbjct: 87 PRPRSHAHALPRSTRLLGMRCALSAKINEGRFFVVD 122 >UniRef50_Q04PT9 50S ribosomal protein L4 n=23 Tax=Leptospira RepID=RL4_LEPBJ Length = 211 Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 12/197 (6%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 S + + F + A +++ + A A R G A KTR+EV G GKKPW QKGTG AR Sbjct: 14 SEIELPSALFESKLSVASIYEAIKAENANLRSGNHATKTRSEVRGGGKKPWSQKGTGHAR 73 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 GS ++P W GG + +D+S KV+ K+ A+ SIL++ + + V+E + Sbjct: 74 QGSTRAPHWVGGGTVHGPQKRDYSYKVSSKLKHKAVLSILNKKAQASAVKVIEDLDPKEY 133 Query: 130 KTKLLAQKLKDMALEDV----LIITGELDENLFL--AARNLHKVDVRDATGIDPVSLIAF 183 TK K+M L + ++ GE D F+ + RN+ V ++ I ++ Sbjct: 134 STKSFDSIFKNMNLRNTGVIGFLVQGESD---FVKKSVRNIPTVKYINSKRISCRDILYN 190 Query: 184 DKVVMTADAVKQVEEML 200 +V+T A + EML Sbjct: 191 RNLVITEAA---LNEML 204 >UniRef50_UPI0001509D48 ribosomal protein L4/L1 family protein n=1 Tax=Tetrahymena thermophila RepID=UPI0001509D48 Length = 358 Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 103/185 (55%), Gaps = 8/185 (4%) Query: 23 FNEALVHQVVVAYAAGARQG-----TRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPI 77 FN L +V +Y RQ T KT+ V+GSGKKP+ QKGTG+AR G+ ++P Sbjct: 98 FNVPLRRDIVHSYVLW-RQNRDEIKTHITKTKGTVSGSGKKPYAQKGTGKARMGNKRAPG 156 Query: 78 WRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQK 137 + GG A+P+ +NKK+ ALK +LS + + +L ++E V+ PKT+ +A+ Sbjct: 157 RKKGGKAHGAKPRILRYPLNKKIRLQALKVVLSAKLAEGKLRIIETEQVDEPKTRAIAKM 216 Query: 138 LKDMALEDVLIITG--ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQ 195 L+ M ++I ++D N LA +N+ K+ + + ++ D+V +T +A++Q Sbjct: 217 LEKMDKRSRILIVHPYQIDTNFELAHQNIQKLQSCYPNELSVLKVLTNDRVFITLEALRQ 276 Query: 196 VEEML 200 + + L Sbjct: 277 LTQEL 281 >UniRef50_Q00YX6 50S ribosomal protein L4 (ISS) n=2 Tax=Ostreococcus RepID=Q00YX6_OSTTA Length = 275 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 29/209 (13%) Query: 17 TTFGRDFNEAL----VHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGS 72 T GR F++ L H+VV A AR GT KTR EV+G+ +K QKG GRAR G Sbjct: 57 TLPGRIFDQPLRVDVAHRVVRWQRAKARAGTHKTKTRGEVSGTTRKARPQKGQGRARVGM 116 Query: 73 IKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTK 132 +++P R GGV P+ H+ + KK+ R LK LS + ++++V+ F+ PKT+ Sbjct: 117 LRAPQMRGGGVAHGPVPRSHAYALPKKVRRMGLKVALSARAAEGKIVIVDSFAGMEPKTR 176 Query: 133 LLAQKLK----DMAL------EDVLIITGEL---------------DENLFLAARNLHKV 167 ++ + L+ DM L LI+ GE +E + +++RNL V Sbjct: 177 VMKETLERLTGDMGLAAGGKFHSTLIVDGEFEETSEEDDDEETYSPNEIVRISSRNLPHV 236 Query: 168 DVRDATGIDPVSLIAFDKVVMTADAVKQV 196 +V G + S++ +VMT ++Q+ Sbjct: 237 EVLPQIGANVYSILRRRTLVMTKSGLEQL 265 >UniRef50_B4KI26 GI14673 n=2 Tax=Drosophila RepID=B4KI26_DROMO Length = 911 Score = 90.5 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 12/162 (7%) Query: 47 KTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGAL 105 KTRAEV G G+KPW QKG GRAR GSI+SP+++ GGV R P H + L Sbjct: 733 KTRAEVRGGGRKPWPQKGMGRARHGSIRSPLFKGGGVIHGPRSPTTHFYMLPFYKRVMGL 792 Query: 106 KSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE-----DVLIITGE--LDENLF 158 S LS + QD L ++E VE P AQ ++D+ E VLI+ EN+ Sbjct: 793 TSTLSVKLAQDDLHIIE--DVEIPTKD--AQFIRDLIQERNWGPSVLIVDKHDVFPENIC 848 Query: 159 LAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 A ++ V++ A G++ S++ D +V+T +AVK +EE L Sbjct: 849 YATDSIGYVNLMPAYGLNVYSMLKHDTLVLTVEAVKHLEERL 890 >UniRef50_B8BX09 RM4, ribosomal protein 4 (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8BX09_THAPS Length = 199 Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 9/199 (4%) Query: 10 SALTVSETTFGRD-FNEALVHQVVVAYAAGARQGTRA----QKTRAEVTGSGKKPWRQKG 64 ++ +S TFG D ++H+ VV Y R+G R KT EV+GSG+K QKG Sbjct: 2 GSIHLSAHTFGCDPIRVDILHRCVV-YQRNKRRGKRNAGARTKTIHEVSGSGRKVRNQKG 60 Query: 65 TGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 G AR+G + WR G + QD++ K+NKK+ + ++ LS+ + + LIV+ Sbjct: 61 GGVARAGHSRPAHWRGGAKAHGPKGSVQDYTTKLNKKVRKMGVRHALSQKLLEGNLIVMG 120 Query: 123 KFSVEAPKTKLLAQKLKDMALEDVL-IITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 + ++ KTK L + L + + G L+ NL +A+ NL KV V + G + L+ Sbjct: 121 DLNAKSHKTKELEEALGRFGIAGKKGTVYGGLNVNLKVASGNLFKVKVMNQLGTNVYDLL 180 Query: 182 AFDKVVMTADAVKQVEEML 200 +K+V++ AVK +EE L Sbjct: 181 KHEKLVLSLSAVKALEERL 199 >UniRef50_Q54RB5 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54RB5_DICDI Length = 258 Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 104/191 (54%), Gaps = 3/191 (1%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + +S+ F L+H++V A ++QGT + + KKP RQKG+G AR G Sbjct: 66 IQLSKDVFSVPLRVDLLHRMVRYQRAKSQQGTHQALNMGRMERTNKKPTRQKGSGNARKG 125 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 + S +R G TFA + H+ + +K+ + LK LS + Q++L+VV+ F++E+ KT Sbjct: 126 TNHSVHFRGGARTFAPTMRSHAHDLPRKVRKLCLKVALSTKLAQNKLVVVDGFNLESHKT 185 Query: 132 KLLAQKL-KDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 K L KL KD L++ E+ + L ++ N+ K+D G++ +++ D +V+T Sbjct: 186 KELLSKLPKDWG--RTLLVDSEISDFLNKSSLNVQKIDTLPQLGLNVYTILQNDTLVLTK 243 Query: 191 DAVKQVEEMLA 201 +V+ ++ L Sbjct: 244 SSVEALQARLT 254 >UniRef50_B4JAB3 GH11428 n=2 Tax=Coelomata RepID=B4JAB3_DROGR Length = 923 Score = 89.0 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 61/162 (37%), Positives = 91/162 (56%), Gaps = 12/162 (7%) Query: 47 KTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGAL 105 KTRAEV G G+KPW QKG GRAR GSI+SP+++ GG+ R P H + L Sbjct: 745 KTRAEVRGGGRKPWPQKGMGRARHGSIRSPLFKGGGIVHGPRSPTSHFYMLPFYTRVLGL 804 Query: 106 KSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE-----DVLIITGE--LDENLF 158 S LS + QD L ++E +VE P AQ ++D+ E VLII + EN+ Sbjct: 805 TSTLSVKLAQDDLHIIE--NVELPTRD--AQFIRDLIAERNWGPSVLIIDKQEMFPENIC 860 Query: 159 LAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 A ++ V++ + G++ S++ D +V+T +AVK +E+ L Sbjct: 861 YATDSIGYVNLMPSFGLNVYSMLKHDTLVLTVEAVKHLEQRL 902 >UniRef50_Q4PHH8 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PHH8_USTMA Length = 438 Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 6/154 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H VV Y R GT + K R++V GS +K QKG+G+AR G++ +PI R G V Sbjct: 162 VIHSAVVYYLDAQRSGTASTKGRSDVRGSMRKLRPQKGSGQARLGTMSNPILRGGAVAHG 221 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK--TKLLAQKLKDMALE 144 RP+DHS K+ +++ AL+S LS RQ L+VVE + AP T LA+ L Sbjct: 222 PRPRDHSTKLPRRVRELALRSALSSKWRQGNLLVVENLNWTAPPSSTGPLARLLGSKGWS 281 Query: 145 DVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 D L +T D + R+L K D R ++ DP+ Sbjct: 282 DALFLTAPRDPQPSM--RSLIK-DARPSSS-DPI 311 >UniRef50_O74801 60S ribosomal protein yml6, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=RL4P_SCHPO Length = 261 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 30/201 (14%) Query: 23 FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGG 82 F ++H+ V+ A RQGT + K R E+T SG+K +RQKGTG AR G SPI R G Sbjct: 33 FRRDILHRAVIYEADNDRQGTASSKRRNEITCSGRKLYRQKGTGHARVGDASSPIRRGGA 92 Query: 83 VTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK-FSVEAPKTKLLAQKLKDM 141 + +P+D S K+ ++Y A++ LS + L ++E ++ PKT++L + LK Sbjct: 93 KSHGPKPRDFSTKLQTQVYNLAMRIALSTRFINNELTILENPINLSQPKTRILLEVLKQH 152 Query: 142 AL-----EDVLIITGEL-------DENLFLAARNL--H-------KVDVRDATGIDPVSL 180 L + + ++ + NL LA+R L H + VRDA Sbjct: 153 KLGHEYGKALFVLNDNYFEDESLKNNNLLLASRQLGYHCSFIPVGEFQVRDA-------- 204 Query: 181 IAFDKVVMTADAVKQVEEMLA 201 + F K+ + ++A+ + E A Sbjct: 205 LKFGKLFIDSEAMSLIVEKFA 225 >UniRef50_Q075M8 Plastid 50S ribosomal protein L4 family (Fragment) n=1 Tax=Prototheca wickerhamii RepID=Q075M8_PROWI Length = 228 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 5/128 (3%) Query: 13 TVSETTFGRD-FNEA----LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 +V T G D FN ++H+VV A +QGT KTR EV G G+KP QKG G Sbjct: 80 SVGSFTLGGDVFNTVVRPDILHRVVRWQLAARQQGTHKTKTRTEVRGGGRKPRPQKGGGV 139 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 +R GSI++P WR GGV P+ H+ K+ K + R L+S LS R+ RL++V+ + Sbjct: 140 SRQGSIRAPQWRGGGVAHGPVPRSHAIKLLKSIRRLGLRSALSAKAREGRLVIVDTLRLP 199 Query: 128 APKTKLLA 135 KT+ LA Sbjct: 200 EAKTRALA 207 >UniRef50_O50061 50S ribosomal protein L4, chloroplastic n=23 Tax=cellular organisms RepID=RK4_ARATH Length = 282 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 6/179 (3%) Query: 22 DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSG 81 D A+VH+ +V R+GT + TR EV G G KP+ QK TG AR GS ++P+ G Sbjct: 77 DTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGG 136 Query: 82 GVTFAARPQDHSQKVNKKMYR-GALKSILSELVRQDRLIVVEKFS--VEAPKTKLLAQKL 138 GV F RP+D S K+N+K + ++ S + IVVE+F E PKTK + Sbjct: 137 GVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFGEKFEKPKTKDFLAAM 196 Query: 139 KDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 + L E + + ++DEN+ ++RN+ + + ++ ++ DK+V+T AV+ Sbjct: 197 QRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVE 255 >UniRef50_C6XHJ0 50S ribosomal protein L4 n=2 Tax=Rhizobiaceae RepID=C6XHJ0_LIBAP Length = 207 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 1/191 (0%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + ++VSE F + ++ +V+ + R G K R+EV +G K + QKGTGRA Sbjct: 14 KGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYTGSKMYVQKGTGRA 73 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R S +R GG F P + KK+ AL+ LS+ + ++V++ + Sbjct: 74 RHSSKSVSQFRGGGKAFGPVPIIGVHALPKKVRSLALRHALSDKFCSNDIMVIDNLVSKE 133 Query: 129 PKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 KTK L + + + L + LII G +LD N LAARN+ +++ GI+ ++ K+V Sbjct: 134 CKTKYLVTRFRALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQGINVYDILRCSKLV 193 Query: 188 MTADAVKQVEE 198 ++ A++ +E+ Sbjct: 194 LSKSAIEALED 204 >UniRef50_B2WIG6 50S ribosomal protein L4 n=5 Tax=Leotiomyceta RepID=B2WIG6_PYRTR Length = 575 Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 1/110 (0%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H+ VV R GT + KTR EV GS +K QKGTG AR G SP+ R GGV F Sbjct: 98 ILHRAVVYEGDATRLGTASTKTRHEVHGSRRKVRPQKGTGHARLGDRMSPMLRGGGVAFG 157 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK-FSVEAPKTKLLA 135 +P+D S ++ KK+Y A ++ LS R+ LI+V+ +E+P T+LLA Sbjct: 158 PKPRDFSSELPKKVYDLAFRTALSYRFRKGELIIVDNAMELESPSTRLLA 207 >UniRef50_C8N6G3 50S ribosomal protein L4 n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6G3_9GAMM Length = 103 Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 1/103 (0%) Query: 100 MYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLF 158 MYR AL+SI SEL RQDRL +VE+ + + KTK +M +D L+IT L+ENLF Sbjct: 1 MYRAALRSIFSELQRQDRLCLVEELNFSSNKTKDFVSYAAEMGFGQDFLLITESLNENLF 60 Query: 159 LAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 LA+RN+ V V D IDPV L+ +KV + A++++ E L+ Sbjct: 61 LASRNIPSVVVVDVEAIDPVLLLRHEKVAIDKLAIERINEWLS 103 >UniRef50_Q0INA7 Os12g0488600 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0INA7_ORYSJ Length = 346 Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 6/133 (4%) Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 KP++QKGTGRAR G+++ P +R G +P+ H+ K+ KK+ R LK LS + + Sbjct: 173 KPYKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGK 232 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALED----VLIITGELDENLFLAARNLHKVDVRDAT 173 L+V E V + KTK + + M ED +L+ G++D+ L LA +NLH V+V + Sbjct: 233 LLVFEDLEVPSHKTKNVVSYISQM--EDTKKVLLVDGGDIDKKLKLATQNLHYVNVLPSI 290 Query: 174 GIDPVSLIAFDKV 186 G++ S++ D + Sbjct: 291 GLNVYSILQHDTL 303 >UniRef50_Q9BYD3 39S ribosomal protein L4, mitochondrial n=28 Tax=Coelomata RepID=RM04_HUMAN Length = 311 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 95/183 (51%), Gaps = 13/183 (7%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++HQV + R KTRAEV G G+KPW QKGTGRAR GSI+SP+WR GGV Sbjct: 95 ILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHG 154 Query: 87 AR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL-- 143 R P + + K+ LK L+ + QD L +++ S+E P Q L ++A Sbjct: 155 PRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMD--SLELPTGD--PQYLTELAHYR 210 Query: 144 ---EDVLII---TGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVE 197 + VL++ E+ +++ A L ++ A G++ S++ +V+T V +E Sbjct: 211 RWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVGLNVHSMLKHQTLVLTLPTVAFLE 270 Query: 198 EML 200 + L Sbjct: 271 DKL 273 >UniRef50_Q9V3D0 Mitochondrial ribosomal protein L4 n=14 Tax=Endopterygota RepID=Q9V3D0_DROME Length = 296 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 12/162 (7%) Query: 47 KTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGAL 105 KTRAEV G G+KPW QKG GRAR GS++SP+ + GGV R P H + L Sbjct: 118 KTRAEVRGGGRKPWPQKGGGRARHGSLRSPMLKGGGVVHGPRSPTTHFYMLPFYKRVLGL 177 Query: 106 KSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE-----DVLIITGE--LDENLF 158 S LS + QD L +++ +V+ P A+ LKD+ E VLI+ + N+ Sbjct: 178 TSTLSVKLAQDDLHIID--NVDIPTGD--AEFLKDLIAERNWGPSVLIVDEDHMFPANIC 233 Query: 159 LAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 A+ +L V++ G++ S++ D +V+T AVK +E+ L Sbjct: 234 QASDDLGYVNLMPTFGLNVYSMLKHDTLVLTVAAVKHLEQRL 275 >UniRef50_Q4FLL9 50S ribosomal protein L4 n=3 Tax=Candidatus Pelagibacter RepID=RL4_PELUB Length = 207 Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 7/202 (3%) Query: 2 ELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTR--AEVTGSGKKP 59 +L L + ++ V + F N+ LV V+ Y A R KT+ E+TGS K Sbjct: 5 KLNLDGKKDSIEVLDKIFSAKINKRLVDNVL--YKTNANYKGRHAKTKQQNEITGSTSKI 62 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAARPQ--DHSQKVNKKMYRGALKSILSELVRQDR 117 + QKGTG AR S K+PI+ GGV + + +K+NK + ++ S+++E + + Sbjct: 63 YAQKGTGGARHASRKAPIFVGGGVAHGPKGELAYKKRKLNKSEKKLSIASLITEKNKLNN 122 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELD-ENLFLAARNLHKVDVRDATGID 176 LI+ F E KTK + +K + + LII + E + + RN+ V V D Sbjct: 123 LIIFSDFGNEIKKTKEMHSIIKKFEITNSLIILDKSSKEKIEKSVRNIPNVKVTDINHFS 182 Query: 177 PVSLIAFDKVVMTADAVKQVEE 198 +I F KVV T ++K++E+ Sbjct: 183 AFDIIKFKKVVFTESSIKELEK 204 >UniRef50_D2VLH2 Ribosomal protein L4/L1e n=1 Tax=Naegleria gruberi RepID=D2VLH2_NAEGR Length = 332 Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 13/178 (7%) Query: 37 AGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKV 96 A RQGT K R E +K QKG G AR +P +R GG A RP+ + + Sbjct: 147 AKRRQGTHKTKYRLETAYCKQKQTPQKGRGAARHSDRGAPQYRGGGHAMALRPRSYEYNL 206 Query: 97 NKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED----------- 145 NKK+ R AL+ L+ +Q +LI+V+ FS++ KTK +A + + D Sbjct: 207 NKKIRRLALRMALTTKYQQGKLIIVDDFSIDTFKTKYVAGLISNTVFPDSETHEKEIKDR 266 Query: 146 -VLIITGE-LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 VL+I GE ++ N NLH D G++ ++ +KVV++ ++ + + A Sbjct: 267 GVLLIDGEQVNANFERGVFNLHYADYLSIDGLNVYDMLRREKVVISKSGLETLTKKYA 324 >UniRef50_B4U745 50S ribosomal protein L4 n=4 Tax=Aquificaceae RepID=RL4_HYDS0 Length = 200 Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 4/193 (2%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 + + + + F + + ++ VV A RQGT + KTRAEV S KK QKGTG AR Sbjct: 4 NGVELRDDVFNVEPKKHILWDVVRWQLAKRRQGTHSTKTRAEVNCSKKKIMPQKGTGNAR 63 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVE 127 G+ + I+ GGV P+D+ K++KK + AL LS + + + V+E S+ Sbjct: 64 HGARSANIFVGGGVVHGPTPRDYEYKLSKKYRKIALAMALSTKAKNNSVYVLESLLSSLG 123 Query: 128 APKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 PKTK+ + LK+ + D VL++T + ++ + + +N+ V G++ ++ D Sbjct: 124 KPKTKVAFELLKEKGISDKKVLVVTKDQNDIVSKSFKNIPNTKVLPVVGLNVYDILWADA 183 Query: 186 VVMTADAVKQVEE 198 +++ A++++ E Sbjct: 184 LLIEQGALEKIYE 196 >UniRef50_C8V2I4 50S ribosomal protein L4 (AFU_orthologue; AFUA_5G12800) n=9 Tax=Eurotiomycetidae RepID=C8V2I4_EMENI Length = 287 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/96 (43%), Positives = 60/96 (62%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H+ VV RQGT + K R +V GS +K + QKGTGRAR G KSPI R GGV F Sbjct: 94 ILHRAVVYEGDMTRQGTASTKWRGDVHGSNRKLYAQKGTGRARVGDKKSPIRRGGGVAFG 153 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 P+D S ++ +K+Y A + LS R+ +LI+++ Sbjct: 154 PHPRDFSTELPRKIYDQAWRIALSYRYRRGQLIIID 189 >UniRef50_C7Z3X5 Predicted protein n=3 Tax=Sordariomycetes RepID=C7Z3X5_NECH7 Length = 321 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 41/205 (20%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H VV RQGT + K R E+ GS +K QKGTGRAR G+ +SP+ R GG F Sbjct: 96 ILHLAVVFEGDNTRQGTASTKNRWEINGSHRKMRPQKGTGRARLGTKQSPLLRGGGKVFG 155 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE----------------KFSVEAPK 130 +P+D +N+K+Y A ++ LS R+ LIV E K+ + K Sbjct: 156 PKPRDFGTGLNRKVYDKAWRTALSYRYRKGDLIVCEDGMDLALPTDFELLAGKYLKDGMK 215 Query: 131 TKLLAQKLKDM--------ALEDVLIITGELDENLFLA---------ARNLHKVDVRDAT 173 L + + M A L +TG E LF A A +L VDV+D Sbjct: 216 ETYLKKYMTGMLGNLGLGRASGRTLFVTGNRREALFEAMEQVPWEGRALDLEDVDVKD-- 273 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEE 198 L+ KVV+ +K++ E Sbjct: 274 ------LLETGKVVLERSVLKEMIE 292 >UniRef50_A2R423 Contig An14c0190, complete genome n=6 Tax=Trichocomaceae RepID=A2R423_ASPNC Length = 289 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/96 (44%), Positives = 60/96 (62%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H+ VV RQGT + K R +V GSG+K QKGTGRAR G KSPI R GGV F Sbjct: 96 ILHRAVVYEGDMTRQGTASTKWRDDVHGSGRKLHAQKGTGRARVGDKKSPIRRGGGVAFG 155 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 P+D S ++ +K+Y A + LS ++ +LI+V+ Sbjct: 156 PHPRDFSTELPQKIYDQAWRIALSYRYKRGQLIIVD 191 >UniRef50_Q7RXV7 60S ribosomal protein L4, mitochondrial n=5 Tax=Sordariomycetes RepID=Q7RXV7_NEUCR Length = 349 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/96 (43%), Positives = 59/96 (61%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H V+ R+G + KTR EV GS KK QKGTG AR G+ +SP+ + GG TF Sbjct: 120 ILHLAVIYEGDSTRRGMASTKTRYEVHGSHKKMSPQKGTGNARRGTRQSPLMKGGGKTFG 179 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 +P+D S K+NKK+Y A ++ LS ++ LIV E Sbjct: 180 PKPRDFSTKLNKKVYDLAWRTALSYRYKRGELIVTE 215 >UniRef50_A8QA96 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QA96_MALGO Length = 395 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 2/151 (1%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K A + + +S F ++ +H VV Y R GT + K+R++V SGKK QKGT Sbjct: 85 KRAIAYVPMSSHVFNTAPHQHAMHMAVVYYLDALRSGTASTKSRSDVAYSGKKLRPQKGT 144 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR +P+ R GGV +P+D + +K+ AL+S LS R+ RL VV Sbjct: 145 GRARLSDAGNPMLRGGGVAHGPKPRDFKTDLPRKVRELALRSALSARFREGRLHVVPSLD 204 Query: 126 VEAPK--TKLLAQKLKDMALEDVLIITGELD 154 AP T LA+ L + L +T D Sbjct: 205 WYAPPMSTNKLARLLSAKQWTNTLFLTAPRD 235 >UniRef50_B6K4T6 50S ribosomal protein L4 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K4T6_SCHJY Length = 245 Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 3/118 (2%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++ + VV A R GT K+R+E+ SGKK QKGTGRAR G SP+ R G V Sbjct: 34 ILQKAVVFEANRDRAGTANTKSRSEINCSGKKLRPQKGTGRARLGDASSPMLRGGAVAHG 93 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE-KFSVEAPKTKLLAQ--KLKDM 141 +P+D + K+ K++ A++ LSE RQ+ L+V++ E +KLL KL D+ Sbjct: 94 PKPRDFTTKMPTKIFSKAMRVALSERFRQNELLVLDSPLHTEQLTSKLLNAFVKLHDL 151 >UniRef50_B8LSS3 50S ribosomal protein L4 n=6 Tax=Eurotiomycetidae RepID=B8LSS3_TALSN Length = 299 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 5/139 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H+ VV RQGT + K R +V GSG+K QKGTG AR G KSPI R GGV Sbjct: 100 LLHRAVVYEGDKTRQGTASTKWRDDVHGSGRKLAPQKGTGNARVGDKKSPIRRGGGVAHG 159 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE-- 144 P+D S + +K+Y A + LS + +L+VV+ + ++ ++ L Sbjct: 160 PHPRDFSTDLPRKVYDKAWRIALSYRYTRGQLLVVDNIQTPDNSSPWFWKRFFEVNLWGK 219 Query: 145 ---DVLIITGELDENLFLA 160 + +DE+LF A Sbjct: 220 NHGGCTFVKDRMDEDLFGA 238 >UniRef50_UPI00017927E1 PREDICTED: similar to GA19152-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI00017927E1 Length = 308 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ + ++ + + + FG ++H+ VV K AEV S KKPW Sbjct: 83 LDTIKENPSTIIDLHPQVFGSRPRIDIIHENVVWQKKYKYVSYANTKVTAEVNMSSKKPW 142 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQK-----VNKKMYRGALKSILSELVRQ 115 QKG GRAR G+ +SP++R G V P+ H+ K++Y L S LS + Q Sbjct: 143 PQKGQGRARHGTRRSPLFRGGSVIHG--PRSHTTHFYMLPFYKRVY--GLTSTLSVKLIQ 198 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLII--TGELDENLFLAARNLHKVDVRD 171 D L VV + + L D L VL I T + +N+ LA + +++ Sbjct: 199 DDLHVVNNLDIPTDDPGYI-NDLVDSRLWGPSVLFIDDTDTMPKNISLALNQIKHMNLMP 257 Query: 172 ATGIDPVSLIAFDKVVMTADAVKQVEEML 200 G++ S++ ++ +V+T AVK+++E L Sbjct: 258 VYGLNVYSMLKYETLVLTVAAVKKIQERL 286 >UniRef50_B6HLY3 Pc21g08410 protein n=3 Tax=mitosporic Trichocomaceae RepID=B6HLY3_PENCW Length = 311 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 58/97 (59%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H+ VV RQG+ + K R +V GS KK + QKG+GRAR+G SP+ R GGV F Sbjct: 97 ILHRAVVYEGDSTRQGSASTKWRDDVHGSHKKLYAQKGSGRARAGDKMSPVRRGGGVAFG 156 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 P+D S + +K+Y A + LS + + LIVV+ Sbjct: 157 PHPRDFSTDLPRKIYDQAWRIALSHRLSRGELIVVDN 193 >UniRef50_C1BS34 Mitochondrial 39S ribosomal protein L4 n=1 Tax=Lepeophtheirus salmonis RepID=C1BS34_9MAXI Length = 275 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 83/171 (48%), Gaps = 29/171 (16%) Query: 47 KTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGG---------VTFAARPQDHSQKVN 97 K R E+ G G +PW QKGTGRAR S +SPIW GG F P H +VN Sbjct: 94 KDRYELPGKGARPWPQKGTGRARHKSKRSPIWLQGGKAHGPKGPKTNFFMLPYQH--RVN 151 Query: 98 KKMYRGALKSILSELVRQDRLIVVEKF-SVEAPKTKLLAQKLKDMALE-----DVLIITG 151 L LS QD +I+V+ F +E+ + L+D+ E L + G Sbjct: 152 ------GLIHTLSVKFAQDDIIIVQNFDDLESTD----PEDLEDLISERGWGLSTLFVNG 201 Query: 152 E--LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 + EN+ A+ ++ V+V + G++ S++ +V+T DAV +E+ L Sbjct: 202 DSIAPENITAASESILHVNVMPSFGLNVHSMLKHKTLVLTLDAVNLIEDKL 252 >UniRef50_D0RNM6 Ribosomal protein, L4/L1 family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNM6_9RICK Length = 209 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 3/193 (1%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 +L S+ F + ++ QV+ + T K+R EV GS KK +QKG+G AR Sbjct: 15 SLEASDKVFKVKPRKDIIQQVIDWQQNRMFKKTGHTKSRGEVKGSRKKIVQQKGSGGARH 74 Query: 71 GSIKSPIWRSGGVTFAARPQDHS--QKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 G+I +P++ GG+ R + + +K+NKK+ + L LS + D++ + + + Sbjct: 75 GNITAPVFVGGGIAHGPRHRGNYAVKKLNKKVRKLGLVHALSVKAKSDQIAIFNEPKISG 134 Query: 129 PKTKLLAQKLKDMALEDVLIITGELDENLFL-AARNLHKVDVRDATGIDPVSLIAFDKVV 187 KTK LK++ + L I + F+ + +N+ + G + LI ++KV+ Sbjct: 135 LKTKNFKDFLKNIKSKSALFIHHKDAPKEFVRSIKNIPNSKKLEDVGTNVYDLIKYEKVL 194 Query: 188 MTADAVKQVEEML 200 T ++ K +EE L Sbjct: 195 FTKESFKAIEERL 207 >UniRef50_Q05FI6 Ribosomal protein L4 n=4 Tax=Candidatus Carsonella ruddii RepID=Q05FI6_CARRP Length = 172 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/38 (78%), Positives = 32/38 (84%) Query: 49 RAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 R V GSGKKPW QKGTGRAR+G KSPIWRSGGVTF+ Sbjct: 43 RRLVFGSGKKPWIQKGTGRARAGDKKSPIWRSGGVTFS 80 >UniRef50_UPI000186E58D mitochondrial 50S ribosomal protein L4, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E58D Length = 286 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 87/162 (53%), Gaps = 8/162 (4%) Query: 45 AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKV--NKKMY 101 + KTRAE+ GSG+KP QKGTGRAR GS ++P + GG R P + ++ KK++ Sbjct: 115 SAKTRAEMKGSGRKPHPQKGTGRARLGSRRAPQVKGGGTCHGPRNPTSYYFRIPLYKKIH 174 Query: 102 RGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGE--LDENLF 158 L S LS + Q+ L VV+ ++ ++ + +K+ VLI+ + + N+ Sbjct: 175 --GLTSTLSAKLAQNDLHVVDNINIPTDDSQYMIDLMKERNWGSSVLIVDSDDIMPRNIS 232 Query: 159 LAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 +A ++ + + G++ ++ D +V+T A+ ++E L Sbjct: 233 IATDSIGYITLMPVYGLNVYGMLKHDTLVLTLSALDELENKL 274 >UniRef50_Q8IB54 Mitochondrial ribosomal protein L4, putative n=10 Tax=Aconoidasida RepID=Q8IB54_PLAF7 Length = 568 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 7/197 (3%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAY-AAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 D ++V FG ++H+ Y A A R Q + E GS KK QK + Sbjct: 187 DNIKYISVPNDIFGLPIRSDILHKCYYFYRTALAGYTERMQLYKWEWPGSTKKYRSQKKS 246 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 G+AR K+ G RP D +N+K +K +LS QD++ VV+ F Sbjct: 247 GKARMNWRKTCGRYLGVKNHPIRPFDQKTNINRKFLWKGMKILLSAKFAQDQIKVVDNFL 306 Query: 126 VEAPKTKLLAQKLKDMALED----VLIITGELD--ENLFLAARNLHKVDVRDATGIDPVS 179 +++ KTK + L+++ ++ +L+ G+ D +N A N+ V + G++ + Sbjct: 307 IKSHKTKYTVKYLRNILGKNCNSALLVHEGKTDVNDNFLWACANIASVKRENVEGVNIYN 366 Query: 180 LIAFDKVVMTADAVKQV 196 L+ + VV T A+K + Sbjct: 367 LLKYRYVVFTYKALKNI 383 >UniRef50_B7P338 Ribosomal protein L4, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7P338_IXOSC Length = 295 Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 21/162 (12%) Query: 47 KTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGAL 105 +TRAE G G+KPW QKGTGRAR GSI++P W+ GGV+ R P+ + Y Sbjct: 125 QTRAERRGGGRKPWPQKGTGRARHGSIRAPQWKGGGVSMGPRGPRTY-------FY---- 173 Query: 106 KSILSELVRQDRLIVV--EKFS--VEAPKTKLLAQKLKDMALE---DVLIITGELDENLF 158 +L R + LI KF+ E T L + + T + +N+ Sbjct: 174 --MLPFFRRVEGLITALSVKFAQVTEMLCTFLCTSRATSHSSRFGWHCFRSTDYVPKNIA 231 Query: 159 LAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 +A + +++ G++ S++ +D +V+T A +++E L Sbjct: 232 VACDQIKHMNIMPVYGLNVHSMLKYDTLVLTLSAAEEIEAKL 273 >UniRef50_UPI000180C8CE PREDICTED: similar to mitochondrial ribosomal protein L4 n=1 Tax=Ciona intestinalis RepID=UPI000180C8CE Length = 330 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 8/158 (5%) Query: 47 KTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGAL 105 +TRAE+ KKPW QKGTGRAR GS SP+W GG++ R P+ ++N L Sbjct: 130 RTRAEIGRGKKKPWPQKGTGRARHGSSNSPLWVKGGISQGPRGPRASFYELNPNTLLDGL 189 Query: 106 KSILSELVRQDRLIVVE--KFSVEAPKTKLLAQKLKDMALEDVLIITGELDENL-FLA-- 160 LS Q+ LI++E + S + P + ++++ +L++ E +EN+ +L Sbjct: 190 LIALSIKHIQNDLIIIESAQISQDMPDFDEYLEN-RNLSEASMLLVHAE-NENISYLEHL 247 Query: 161 ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 A + +++ G++ S++ DK+V++ + ++E Sbjct: 248 AEDSKLLNIMPLYGLNVCSILKHDKLVLSRCILDELEH 285 >UniRef50_C1FJ75 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1FJ75_9CHLO Length = 190 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 13/185 (7%) Query: 17 TTFGRDFNEAL----VHQVVVAYAAGARQGTRAQK-TRAEVTGSGKKPWRQKGTGRARSG 71 T GR F+ L H+VVV + R+G A+ TR+EV+G+ +K QKG GRAR G Sbjct: 4 TLPGRHFDVPLRVDIAHRVVV-WQRSKRRGNYAKTLTRSEVSGTTRKARAQKGAGRARVG 62 Query: 72 SIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVEA 128 ++++P R GGV ++ + K+ +++ R L+ LS + R++V++ VE Sbjct: 63 TLRAPQMRGGGVAHGPSGMRNWNTKLQRRVRRAGLQVALSAKAAEGRIVVLDSLHRGVE- 121 Query: 129 PKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 PKT+ L L + L T N A+ NL V V D G++ ++ + + Sbjct: 122 PKTQWLDGALDTLLGAQKLPTT---HSNAKRASLNLPHVQVMDQFGLNVYDVLRHRSLAI 178 Query: 189 TADAV 193 T DA+ Sbjct: 179 TRDAL 183 >UniRef50_Q4UI83 Putative uncharacterized protein n=1 Tax=Theileria annulata RepID=Q4UI83_THEAN Length = 464 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 21/211 (9%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYA-AGARQGTRAQKTRAEVTGSGKKPWR-Q 62 +K+A L V FG ++H+ Y A A Q + E GS KK WR Q Sbjct: 103 VKEAIRYLRVPNDIFGLPIRPDILHRCYQFYRRAKAGYSEDMQLYKWEWPGSTKK-WRKQ 161 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKK-----------MYRGALKSILSE 111 + +G+AR G KSP G RP+D+ K+ ++ +Y G LK +LS Sbjct: 162 QKSGKARIGWKKSPGKYVGVFAHPLRPKDNRTKIQRRSKLVFLIRFLALYTG-LKIMLSA 220 Query: 112 LVRQDRLIVVEKFSVEAPKTKLLAQKLK----DMALEDVLIITG--ELDENLFLAARNLH 165 Q ++ VV+ F + + KTK Q L+ D +L+ G + +EN + N+ Sbjct: 221 KFAQSQIQVVDSFLMASHKTKYAVQNLRRILGDRCNSALLVFEGLSDSNENFRWSTANIP 280 Query: 166 KVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 V G++ +L+ + ++V+T A++++ Sbjct: 281 SVRRETVEGVNVYNLLKYRQLVITQSALRKL 311 >UniRef50_O17005 Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=O17005_CAEEL Length = 299 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 13/162 (8%) Query: 48 TRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALK 106 T+AE+ G G+KPW QK TGRA GSI+SP + GG R P+ + + L Sbjct: 103 TKAEMPGGGRKPWPQKKTGRAHVGSIRSPQFIRGGFANGVRGPRTWFYMLPDAVRIQGLC 162 Query: 107 SILSELVRQDRLIVVEK---FSVEAPKTKLLAQKLKD-----MALEDVLIITGELDENLF 158 L+ QD L +V+K PK + + ++ + ++D I+G L E Sbjct: 163 VALTLKHTQDDLHIVDKIQNLQNGDPKYWIDLCEARNYGYSVLFVDDCDEISGGLAE--- 219 Query: 159 LAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 A + L ++V G++ SL+ +D +V++ A+++VEE L Sbjct: 220 -AQQALPWLNVMPVYGLNCFSLMKYDTIVLSRSALERVEERL 260 >UniRef50_B7FXM9 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FXM9_PHATR Length = 184 Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 93/175 (53%), Gaps = 21/175 (12%) Query: 47 KTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQ-KVNKKMYRGA 104 KT +EV+GSG+K QKGTG AR+G + P +R G + D+ K+NKK+ + A Sbjct: 7 KTISEVSGSGRKIRNQKGTGMARAGHSRPPHFRGGAKAHGPKNVTDYGNTKLNKKVRKLA 66 Query: 105 LKSILSELVRQDRLIVVEKF-SVEAPKTKLLAQKLK--DMALED---VLIITGELDE--- 155 L LS+ + + LI++ + + KTK L + L+ D+ +D LI+ + E Sbjct: 67 LVHALSQKLLEGNLIILNSLKELPSHKTKELTRFLEPWDIGGKDGATALILDAYISEEEG 126 Query: 156 ----------NLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 NL++A+ N++++ V + ++ +K+V+T A++++E+ L Sbjct: 127 QPQSYKGVPMNLWVASSNIYRIKVGNHLAACVYDILKHEKLVLTLAALEKLEDRL 181 >UniRef50_B6KDX9 50S ribosomal protein L4, putative n=3 Tax=Toxoplasma gondii RepID=B6KDX9_TOXGO Length = 625 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 7/190 (3%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYA-AGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 + + FG ++++ Y A A R Q + E GS +K Q+ +GRAR Sbjct: 212 CVVLPNDIFGLPLRPDILYRCYWFYRRAIAGWTERMQLFKWEWPGSKRKLRTQQRSGRAR 271 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 G K+P G RP D K+NK++ LK +LS Q ++ VV+ F++++ Sbjct: 272 IGWRKAPGKYVGVKAHPLRPHDQRIKINKRLLWQGLKIMLSAKFAQGQITVVDHFNLQSH 331 Query: 130 KTKLLAQKLKDM---ALEDVLII---TGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 KTK + L+ + L++ T ++++N A ++ V + GI+ +L+ + Sbjct: 332 KTKHCVRHLRRLLGRKCPSALLVHEGTTDVNDNFRYATAHILAVRRENVEGINVYNLLKY 391 Query: 184 DKVVMTADAV 193 ++V+T A+ Sbjct: 392 RQLVITEKAL 401 >UniRef50_A8Q8Q6 Ribosomal protein L4/L1 family protein n=1 Tax=Brugia malayi RepID=A8Q8Q6_BRUMA Length = 303 Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 11/157 (7%) Query: 46 QKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGA 104 Q ++ E+ G G KPW QK TGR +GSI+SP +R GG R P+ + + Sbjct: 106 QLSKKEMPGGGHKPWPQKKTGRHHAGSIRSPHFRLGGFANGIRGPKTWFYVLPDAIRLEG 165 Query: 105 LKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE-----DVLII--TGELDENL 157 L ++ Q+ L++V+ F+ P AQ + D+A +L I + E+ EN+ Sbjct: 166 LCIAVTIKHAQNDLVIVDNFA-SLPNAD--AQFMHDLADSRNWGYSILFINDSSEVPENM 222 Query: 158 FLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 + +V GI+ SL+ D V+ + A++ Sbjct: 223 AKVCDEIPTFNVMPVYGINCFSLVKHDTVIFSLAALQ 259 >UniRef50_Q06RI4 23S ribosomal protein L4 n=1 Tax=Brucella ceti RepID=Q06RI4_9RHIZ Length = 176 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%) Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQ+G+ +A+ R GG ++H + KK+ L+ LS + LI+ Sbjct: 43 RQQGSHKAQG--------RGGGQAHGPVVRNHDHDLPKKVLALGLRHALSAKAKASDLII 94 Query: 121 VEKFSVEAPKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRDATGIDPVS 179 ++ + KTK L + + LE+ L+I G E+D N AA N+ +DV GI+ Sbjct: 95 IDDLASADAKTKQLVSQFAKLGLENALLIGGAEIDANFQRAASNIPNIDVLPVQGINVYD 154 Query: 180 LIAFDKVVMTADAVKQVEE 198 ++ K+V++ AV+ +EE Sbjct: 155 ILRRGKLVLSKAAVEALEE 173 >UniRef50_Q5KM69 Ribosomal protein L4, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KM69_CRYNE Length = 406 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/114 (28%), Positives = 58/114 (50%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + F + ++H+ VV Y + R GT++ K+R+ V SG+K QKGTG+AR+G Sbjct: 126 IALPPDVFAQPIRRDILHRCVVWYLSQLRSGTKSTKSRSTVAYSGRKLIPQKGTGKARAG 185 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 S R G P++ +Q + +K+ ++ LS ++ L VV + Sbjct: 186 DASSGTRRGGAPIHPIFPKNWAQALPRKVRELGMRVALSSKLKAGLLRVVPNLN 239 >UniRef50_C5KH52 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KH52_9ALVE Length = 497 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 6/157 (3%) Query: 46 QKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGAL 105 Q + E GS KK K G++R G K+P G + RP++ Q K+ +L Sbjct: 157 QLFKWEWPGSNKKARSHKNIGKSRMGRRKAPGKYDGVFSIPQRPREWRQGELKRRVWKSL 216 Query: 106 KSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM---ALEDVLII---TGELDENLFL 159 K +LS Q + VV+ F+V KT+ +A L+ + L+I T ++++N Sbjct: 217 KMMLSAKFAQGEITVVDSFNVSTHKTRHVAAHLRRLLGRHCNSALLIHVGTSDVNDNFRW 276 Query: 160 AARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 ++ +V D G+ +L+ + ++V+T A+ ++ Sbjct: 277 GTAHIAQVRREDVEGVSTYNLLKYRQIVITEQALHKL 313 >UniRef50_Q7YN80 Ribosomal protein L4 n=1 Tax=Eimeria tenella RepID=Q7YN80_EIMTE Length = 213 Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 27/41 (65%) Query: 48 TRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR 88 + ++ S KKPW+QKG G ARSGS KSP+W+ G F + Sbjct: 72 NKNNLSKSTKKPWKQKGLGMARSGSFKSPLWKGGIKLFGPK 112 >UniRef50_A0CQM2 Chromosome undetermined scaffold_24, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0CQM2_PARTE Length = 318 Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 16/205 (7%) Query: 7 DAQS---ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 DAQ ++ + + F + LV ++V ++ T+A + SG K QK Sbjct: 42 DAQPTGQSIALDQEIFNQPIRRDLVQRLVRYTDLYDKKVTKATLALRDAAASGAKNHPQK 101 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARP-----QDHSQKVNKKMYRGALKSILSELVRQDRL 118 TGRAR G + P R+ G+ R D +KV + Y+ L + L E + Sbjct: 102 KTGRARQGHRQRP-GRNKGIKAHGRKIRSLRIDLPRKVRLQAYKVGLTAALIE----GKF 156 Query: 119 IVVEKFSVEAPKTKLLAQKLK--DMALEDVLIITGELDENLFL-AARNLHKVDVRDATGI 175 V++ + KTK L Q +K + + +LI+T ++LFL A+RNL ++ Sbjct: 157 TVIDTEKLNEGKTKHLVQLMKGFESFTQPLLIVTSVDPDDLFLRASRNLENLETCTVKEF 216 Query: 176 DPVSLIAFDKVVMTADAVKQVEEML 200 + + ++ F +++T +A+ Q+ E L Sbjct: 217 NIIKILKFKSILITKEAIIQLTESL 241 >UniRef50_C4PXU3 50S ribosomal protein L4, putative n=1 Tax=Schistosoma mansoni RepID=C4PXU3_SCHMA Length = 409 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVT-GSGKKPWRQKGTGRARSGSIKSPIWRSGGVTF 85 LVH+ + A R TRAE++ G+ KKPW QKGTG+AR G+ ++ IW +GG Sbjct: 118 LVHKNLYWQAHYRLIDWRCITTRAELSYGTRKKPWPQKGTGKARHGNRRTHIWLTGGQCK 177 Query: 86 AAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 R P+ ++ L S+LS Q +VVEK Sbjct: 178 GPRGPESFYYLLSYGERLAGLLSMLSIKHAQVIFVVVEK 216 >UniRef50_P51998 54S ribosomal protein YmL6, mitochondrial n=12 Tax=Saccharomycetaceae RepID=RL4P_YEAST Length = 286 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 3/130 (2%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + V +T ++ + VV R G R+E S +K QKG+GRAR G Sbjct: 58 VPVPTSTVAAPLRRDILWRAVVYENDNRRVGASNPPGRSENGFSRRKLMPQKGSGRARVG 117 Query: 72 SIKSPIWRSGGVTFA-ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV--EKFSVEA 128 SP +GG A P D++ ++ K+Y A + LS + +L V+ EK + + Sbjct: 118 DANSPTRHNGGRALARTAPNDYTTELPSKVYSMAFNNALSHQYKSGKLFVIGGEKVDLIS 177 Query: 129 PKTKLLAQKL 138 P +L +L Sbjct: 178 PTPELDLNRL 187 >UniRef50_Q6BKF7 DEHA2F22330p n=4 Tax=Saccharomycetales RepID=Q6BKF7_DEBHA Length = 255 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 11/105 (10%) Query: 21 RDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW-- 78 RDF + VV A AR G+ T+ + S +K QKGTGRAR+G SPI Sbjct: 59 RDF----LWSAVVYEADRARVGSGYVITKGDKLYSNRKLHPQKGTGRARTGDANSPIRDN 114 Query: 79 --RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV 121 ++ GV P D S ++ K+Y A ++ LS+ R ++ ++ Sbjct: 115 EVKAHGVK---APHDWSTRLPSKVYSKAFQTALSDQYRNGKVFII 156 >UniRef50_UPI0001BCDE73 50S ribosomal protein L4 n=1 Tax=Campylobacter fetus subsp. venerealis str. Azul-94 RepID=UPI0001BCDE73 Length = 119 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 50/105 (47%) Query: 92 HSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITG 151 + QK NKK R AL+ L++ +L V+ + + KTK + + D LII Sbjct: 11 YDQKANKKQKRLALEFALNDKGANGKLYAVDNIQISSGKTKDAISISNKLGVRDALIIKN 70 Query: 152 ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 ELD LA +NL V DA+ ++ + + V+ A++ + Sbjct: 71 ELDAKTLLAIKNLANCYVIDASEVNAYLVSVYSAVIAEKAALQSI 115 >UniRef50_Q6C573 YALI0E20493p n=1 Tax=Yarrowia lipolytica RepID=Q6C573_YARLI Length = 271 Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 2/119 (1%) Query: 14 VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSI 73 V+ G ++ L+ + VV A R G R ++ S +K +QKG G+AR G Sbjct: 61 VTSQMLGAQVHKDLLWRAVVYEADRQRVGASNPPGREQMGYSTRKLHKQKGMGKARVGDA 120 Query: 74 KSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 SP GG P + + K++Y A+++ L+ ++ RL VV+ E P++ Sbjct: 121 GSPTRTQGGFALDRNAPNKMATGLPKQVYASAIRAALTSQYQEGRLFVVDG-PCELPES 178 >UniRef50_D2MKV5 Ribosomal protein L4/L1e n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKV5_9BACT Length = 98 Score = 39.7 bits (91), Expect = 0.055, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Query: 105 LKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARN 163 ++S LS + L+V+ S+ PKTKL+A+ +K + A VL + G + +F A RN Sbjct: 1 MQSALSSKMAAGELLVLADLSLPEPKTKLMAKAVKQLGATGPVLFVVGRDHDAVFRATRN 60 Query: 164 LHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 L +V + ++ + +V+ D + V+E+ A Sbjct: 61 LAQVKAVPPEELTVYDVLRYQTLVVLKDELPNVQELWA 98 >UniRef50_UPI0001923E1E PREDICTED: hypothetical protein n=2 Tax=Hydra magnipapillata RepID=UPI0001923E1E Length = 426 Score = 39.3 bits (90), Expect = 0.086, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 2/121 (1%) Query: 81 GGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKD 140 GGV+ +P+D+S ++ K+ R L++ LS Q L VVE ++ +T + + Sbjct: 248 GGVSGGPKPKDYSYELPFKVRRMGLRTALSCKFAQGDLTVVEDYN-NLTETN-FSDAVTS 305 Query: 141 MALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 ++L+ L + G ++ L K+D + A + ++ K+V++ AV+ +EE L Sbjct: 306 LSLQSSLFVDGFENDYLDSLVSGFEKIDFKPALLLHVYGMLIRSKLVLSLQAVRILEEKL 365 Query: 201 A 201 Sbjct: 366 C 366 >UniRef50_D1ZWQ9 Whole genome shotgun sequence assembly, contig_1528 n=2 Tax=cellular organisms RepID=D1ZWQ9_SORMA Length = 180 Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Query: 109 LSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLF-LAARNLHK 166 LS + L+V++ +VE KT++L L + + L+I G+ EN F LAARNL + Sbjct: 3 LSSHAKAGSLVVLDGLTVENGKTQVLLGNLAKLGFGKTSLVIDGDAVENTFALAARNLRQ 62 Query: 167 VDVRDATGIDPVSLIAFDKVVM 188 V+V A G + ++ D + + Sbjct: 63 VNVLPAGGANVYDILKHDTLAI 84 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C1TLI0 LSU ribosomal protein L4P n=1 Tax=Dethiosulfovib... 271 1e-71 UniRef50_Q21M56 50S ribosomal protein L4 n=42 Tax=Bacteria RepID... 263 2e-69 UniRef50_C5BQ62 50S ribosomal protein L4 n=266 Tax=Gammaproteoba... 263 3e-69 UniRef50_C1KZH9 50S ribosomal protein L4 n=21 Tax=Bacteria RepID... 261 1e-68 UniRef50_Q034Y4 50S ribosomal protein L4 n=209 Tax=Bacteria RepI... 256 2e-67 UniRef50_C9M934 Ribosomal protein L4/L1 family protein n=2 Tax=S... 256 2e-67 UniRef50_C6C186 50S ribosomal protein L4 n=6 Tax=Bacteria RepID=... 255 6e-67 UniRef50_B0RZU1 50S ribosomal protein L4 n=32 Tax=Bacteria RepID... 254 2e-66 UniRef50_A3DJH3 50S ribosomal protein L4 n=16 Tax=Clostridiales ... 251 8e-66 UniRef50_B8I7Y0 50S ribosomal protein L4 n=33 Tax=Firmicutes Rep... 251 1e-65 UniRef50_Q2LQA0 50S ribosomal protein L4 n=12 Tax=Bacteria RepID... 250 2e-65 UniRef50_A5FRZ0 50S ribosomal protein L4 n=5 Tax=Dehalococcoides... 250 2e-65 UniRef50_C0Q9X2 50S ribosomal protein L4 n=1 Tax=Desulfobacteriu... 250 3e-65 UniRef50_A9UV13 Predicted protein n=1 Tax=Monosiga brevicollis R... 250 3e-65 UniRef50_A7RJ96 Predicted protein n=2 Tax=Metazoa RepID=A7RJ96_N... 249 3e-65 UniRef50_Q8VY61 50S ribosomal protein L4 n=18 Tax=Magnoliophyta ... 249 5e-65 UniRef50_Q03ZP4 50S ribosomal protein L4 n=19 Tax=Firmicutes Rep... 248 7e-65 UniRef50_D1CFC7 Ribosomal protein L4/L1e n=2 Tax=Bacteria RepID=... 248 8e-65 UniRef50_D0MYG7 50S ribosomal protein L4 n=1 Tax=Phytophthora in... 248 1e-64 UniRef50_B2V7L2 Ribosomal protein L4/L1e n=4 Tax=Hydrogenotherma... 247 2e-64 UniRef50_C5JB89 50S ribosomal protein L4 n=1 Tax=uncultured bact... 246 3e-64 UniRef50_Q30Z43 50S ribosomal protein L4 n=8 Tax=Bacteria RepID=... 246 3e-64 UniRef50_A9NED4 50S ribosomal protein L4 n=11 Tax=Bacteria RepID... 246 4e-64 UniRef50_B0U0Y8 50S ribosomal protein L4 n=35 Tax=Gammaproteobac... 243 3e-63 UniRef50_A0L5X4 50S ribosomal protein L4 n=1 Tax=Magnetococcus s... 242 5e-63 UniRef50_D1AWK4 Ribosomal protein L4/L1e n=7 Tax=Fusobacteriacea... 241 7e-63 UniRef50_Q02W25 50S ribosomal protein L4 n=145 Tax=Bacteria RepI... 241 8e-63 UniRef50_B5YG46 50S ribosomal protein L4 n=1 Tax=Thermodesulfovi... 241 9e-63 UniRef50_A9T3B9 Predicted protein n=3 Tax=Embryophyta RepID=A9T3... 238 9e-62 UniRef50_A8IAS4 Ribosomal protein L4/L1e n=4 Tax=Alphaproteobact... 237 2e-61 UniRef50_A5IM84 50S ribosomal protein L4 n=51 Tax=Bacteria RepID... 236 5e-61 UniRef50_Q1Q137 Strongly similar to 50S ribosomal protein L4 n=1... 234 2e-60 UniRef50_P10135 50S ribosomal protein L4 n=9 Tax=Bacteria RepID=... 233 2e-60 UniRef50_D2SHA2 Ribosomal protein L4/L1e n=2 Tax=Actinobacteria ... 233 2e-60 UniRef50_C1SPI5 Ribosomal protein L4 n=1 Tax=Denitrovibrio aceti... 233 2e-60 UniRef50_A6GCH8 50S ribosomal protein L4 n=1 Tax=Plesiocystis pa... 233 3e-60 UniRef50_A5USI8 LSU ribosomal protein L4P n=8 Tax=Chloroflexi Re... 232 5e-60 UniRef50_Q110A8 50S ribosomal protein L4 n=17 Tax=Cyanobacteria ... 232 5e-60 UniRef50_Q2GL58 50S ribosomal protein L4 n=15 Tax=Rickettsiales ... 230 2e-59 UniRef50_C1A6Q6 50S ribosomal protein L4 n=1 Tax=Gemmatimonas au... 230 2e-59 UniRef50_D0LIC4 Ribosomal protein L4/L1e n=1 Tax=Haliangium ochr... 230 3e-59 UniRef50_B6WX21 Putative uncharacterized protein n=1 Tax=Desulfo... 229 4e-59 UniRef50_Q00YX6 50S ribosomal protein L4 (ISS) n=2 Tax=Ostreococ... 229 5e-59 UniRef50_B8IYH3 50S ribosomal protein L4 n=6 Tax=Desulfovibriona... 229 6e-59 UniRef50_Q39Y05 50S ribosomal protein L4 n=11 Tax=Desulfuromonad... 228 6e-59 UniRef50_Q12GX0 50S ribosomal protein L4 n=18 Tax=Proteobacteria... 228 9e-59 UniRef50_Q2S3R3 50S ribosomal protein L4 n=2 Tax=Rhodothermaceae... 228 1e-58 UniRef50_B4U745 50S ribosomal protein L4 n=4 Tax=Aquificaceae Re... 228 1e-58 UniRef50_A4FPM4 50S ribosomal protein L4 n=49 Tax=Actinobacteria... 227 2e-58 UniRef50_Q1H4N6 50S ribosomal protein L4 n=174 Tax=Proteobacteri... 227 2e-58 UniRef50_P61061 50S ribosomal protein L4 n=1 Tax=Bdellovibrio ba... 226 2e-58 UniRef50_Q2JFH5 50S ribosomal protein L4 n=91 Tax=Actinobacterid... 226 3e-58 UniRef50_C7PU72 Ribosomal protein L4/L1e n=11 Tax=Bacteroidetes ... 226 3e-58 UniRef50_B9XFN0 Ribosomal protein L4/L1e n=1 Tax=bacterium Ellin... 225 6e-58 UniRef50_B4JAB3 GH11428 n=2 Tax=Coelomata RepID=B4JAB3_DROGR 224 1e-57 UniRef50_B4KI26 GI14673 n=2 Tax=Drosophila RepID=B4KI26_DROMO 223 2e-57 UniRef50_A5FZW4 50S ribosomal protein L4 n=180 Tax=Alphaproteoba... 223 2e-57 UniRef50_B2KEM0 Ribosomal protein L4/L1e n=1 Tax=Elusimicrobium ... 223 3e-57 UniRef50_A3EVS0 Ribosomal protein L4 n=2 Tax=Leptospirillum sp. ... 222 5e-57 UniRef50_A5CCL1 50S ribosomal protein L4 n=18 Tax=cellular organ... 222 5e-57 UniRef50_C8W7Z8 Ribosomal protein L4/L1e n=7 Tax=Coriobacteriace... 222 5e-57 UniRef50_Q83FY7 50S ribosomal protein L4 n=7 Tax=Micrococcineae ... 222 5e-57 UniRef50_B0CPN7 Predicted protein n=2 Tax=Agaricales RepID=B0CPN... 222 6e-57 UniRef50_Q605B3 50S ribosomal protein L4 n=3 Tax=Gammaproteobact... 222 7e-57 UniRef50_D1NBS4 Ribosomal protein L4/L1e n=1 Tax=Victivallis vad... 222 7e-57 UniRef50_C1F641 50S ribosomal protein L4 n=1 Tax=Acidobacterium ... 221 1e-56 UniRef50_Q1D774 50S ribosomal protein L4 n=3 Tax=Myxococcales Re... 221 1e-56 UniRef50_Q9BYD3 39S ribosomal protein L4, mitochondrial n=28 Tax... 221 1e-56 UniRef50_C6XHJ0 50S ribosomal protein L4 n=2 Tax=Rhizobiaceae Re... 221 1e-56 UniRef50_B3EUM2 50S ribosomal protein L4 n=71 Tax=cellular organ... 219 3e-56 UniRef50_C0QVZ7 50S ribosomal protein L4 n=3 Tax=Brachyspira Rep... 219 5e-56 UniRef50_C6XLG6 Ribosomal protein L4/L1e n=7 Tax=Alphaproteobact... 219 6e-56 UniRef50_B3QY25 50S ribosomal protein L4 n=15 Tax=Bacteroidetes/... 218 6e-56 UniRef50_Q4JT48 50S ribosomal protein L4 n=7 Tax=Actinomycetales... 218 1e-55 UniRef50_Q9V3D0 Mitochondrial ribosomal protein L4 n=14 Tax=Endo... 218 1e-55 UniRef50_Q1IX73 50S ribosomal protein L4 n=10 Tax=Bacteria RepID... 217 2e-55 UniRef50_Q2JV82 50S ribosomal protein L4 n=17 Tax=Cyanobacteria ... 217 2e-55 UniRef50_C7MFF5 LSU ribosomal protein L4P n=1 Tax=Brachybacteriu... 217 2e-55 UniRef50_A9BCP6 50S ribosomal protein L4 n=25 Tax=cellular organ... 216 5e-55 UniRef50_Q0EW37 50S ribosomal protein L4 n=1 Tax=Mariprofundus f... 215 6e-55 UniRef50_UPI0001C30EB8 ribosomal protein L4/L1e n=1 Tax=Conexiba... 214 2e-54 UniRef50_P51313 50S ribosomal protein L4, chloroplastic n=3 Tax=... 213 3e-54 UniRef50_B7J468 50S ribosomal protein L4 n=4 Tax=cellular organi... 213 3e-54 UniRef50_Q1ISC1 50S ribosomal protein L4 n=2 Tax=Acidobacteria R... 212 5e-54 UniRef50_B1GZ84 50S ribosomal protein L4 n=1 Tax=uncultured Term... 212 7e-54 UniRef50_UPI000186E58D mitochondrial 50S ribosomal protein L4, p... 209 4e-53 UniRef50_UPI00017927E1 PREDICTED: similar to GA19152-PA n=1 Tax=... 209 5e-53 UniRef50_C6HWF6 Ribosomal protein L4 n=1 Tax=Leptospirillum ferr... 209 5e-53 UniRef50_C9RR33 Ribosomal protein L4/L1e n=1 Tax=Fibrobacter suc... 209 6e-53 UniRef50_C1Z9D6 LSU ribosomal protein L4P n=1 Tax=Planctomyces l... 208 7e-53 UniRef50_B4SKW4 50S ribosomal protein L4 n=13 Tax=Xanthomonadace... 206 3e-52 UniRef50_A6DPN5 50S ribosomal protein L4 n=1 Tax=Lentisphaera ar... 206 4e-52 UniRef50_Q8D211 50S ribosomal protein L4 n=2 Tax=Gammaproteobact... 206 4e-52 UniRef50_C1E7J4 Predicted protein n=2 Tax=Micromonas RepID=C1E7J... 206 4e-52 UniRef50_UPI0000D54D0B 50S ribosomal protein L4 n=1 Tax=Psychrof... 206 5e-52 UniRef50_A4S817 Plastid ribosomal protein L4 large ribosomal sub... 205 5e-52 UniRef50_Q54RB5 Putative uncharacterized protein n=1 Tax=Dictyos... 205 8e-52 UniRef50_D2VLH2 Ribosomal protein L4/L1e n=1 Tax=Naegleria grube... 204 1e-51 UniRef50_B2S2D7 50S ribosomal protein L4 n=25 Tax=Spirochaetacea... 204 2e-51 UniRef50_Q2GED8 50S ribosomal protein L4 n=2 Tax=Neorickettsia R... 203 2e-51 UniRef50_P49546 50S ribosomal protein L4, chloroplastic n=3 Tax=... 203 3e-51 UniRef50_D1J751 Chloroplast 50S ribosomal protein L4 n=2 Tax=Pha... 201 1e-50 UniRef50_Q1AU30 50S ribosomal protein L4 n=1 Tax=Rubrobacter xyl... 201 1e-50 UniRef50_Q4PHH8 Putative uncharacterized protein n=1 Tax=Ustilag... 200 3e-50 UniRef50_B5Y986 Ribosomal protein L4/L1 family n=1 Tax=Coprother... 199 3e-50 UniRef50_Q7VQE7 50S ribosomal protein L4 n=7 Tax=Gammaproteobact... 199 3e-50 UniRef50_B0VI30 50S ribosomal protein L4 n=1 Tax=Candidatus Cloa... 199 4e-50 UniRef50_A8QA96 Putative uncharacterized protein n=1 Tax=Malasse... 199 6e-50 UniRef50_Q7UN19 50S ribosomal protein L4 n=1 Tax=Rhodopirellula ... 199 6e-50 UniRef50_Q0FQD6 50S ribosomal protein L4 (Fragment) n=1 Tax=Rose... 198 8e-50 UniRef50_B1ZNE7 Ribosomal protein L4/L1e n=3 Tax=Verrucomicrobia... 198 1e-49 UniRef50_Q04PT9 50S ribosomal protein L4 n=23 Tax=Leptospira Rep... 196 3e-49 UniRef50_O17005 Putative uncharacterized protein n=2 Tax=Caenorh... 196 4e-49 UniRef50_Q7XYP3 Ribosomal protein rpL4 (Fragment) n=1 Tax=Bigelo... 194 1e-48 UniRef50_Q84U22 Plastid ribosomal protein L4 n=1 Tax=Chlamydomon... 194 2e-48 UniRef50_B8BX09 RM4, ribosomal protein 4 (Fragment) n=1 Tax=Thal... 194 2e-48 UniRef50_B2UMT9 Ribosomal protein L4/L1e n=2 Tax=Verrucomicrobia... 193 3e-48 UniRef50_D0J9J1 50S ribosomal subunit protein L4 n=2 Tax=Blattab... 193 3e-48 UniRef50_B7P338 Ribosomal protein L4, putative (Fragment) n=1 Ta... 193 4e-48 UniRef50_O50061 50S ribosomal protein L4, chloroplastic n=23 Tax... 193 5e-48 UniRef50_C1FJ75 Predicted protein (Fragment) n=2 Tax=Micromonas ... 192 5e-48 UniRef50_B8LSS3 50S ribosomal protein L4 n=6 Tax=Eurotiomycetida... 192 7e-48 UniRef50_Q8IB54 Mitochondrial ribosomal protein L4, putative n=1... 191 8e-48 UniRef50_UPI0001509D48 ribosomal protein L4/L1 family protein n=... 191 9e-48 UniRef50_B6KDX9 50S ribosomal protein L4, putative n=3 Tax=Toxop... 191 1e-47 UniRef50_Q4UI83 Putative uncharacterized protein n=1 Tax=Theiler... 191 2e-47 UniRef50_C4XG14 Putative uncharacterized protein n=2 Tax=Mycopla... 189 4e-47 UniRef50_Q6B8V4 50S ribosomal protein L4, chloroplastic n=1 Tax=... 188 1e-46 UniRef50_Q85FW2 50S ribosomal protein L4, chloroplastic n=1 Tax=... 188 1e-46 UniRef50_P75579 50S ribosomal protein L4 n=2 Tax=Mycoplasma RepI... 186 3e-46 UniRef50_D2R5T8 Ribosomal protein L4/L1e n=4 Tax=Planctomycetace... 186 4e-46 UniRef50_D0RNM6 Ribosomal protein, L4/L1 family n=1 Tax=alpha pr... 186 5e-46 UniRef50_A5IYY5 50S ribosomal protein L4 n=1 Tax=Mycoplasma agal... 185 7e-46 UniRef50_B1AIM1 50S ribosomal protein L4 n=15 Tax=Mycoplasmatace... 185 7e-46 UniRef50_Q9TLT3 50S ribosomal protein L4, chloroplastic n=1 Tax=... 184 1e-45 UniRef50_O74801 60S ribosomal protein yml6, mitochondrial n=1 Ta... 184 1e-45 UniRef50_Q252V4 50S ribosomal protein L4 n=15 Tax=Chlamydiaceae ... 184 1e-45 UniRef50_B7T1Y3 Ribosomal protein L4 n=1 Tax=Vaucheria litorea R... 184 2e-45 UniRef50_A5KRQ2 Ribosomal protein L4/L1e n=1 Tax=candidate divis... 183 4e-45 UniRef50_C1BS34 Mitochondrial 39S ribosomal protein L4 n=1 Tax=L... 182 6e-45 UniRef50_Q8EUB4 50S ribosomal protein L4 n=1 Tax=Mycoplasma pene... 181 8e-45 UniRef50_Q6KI54 50S ribosomal protein L4 n=1 Tax=Mycoplasma mobi... 181 1e-44 UniRef50_Q4A5C2 50S ribosomal protein L4 n=1 Tax=Mycoplasma syno... 180 2e-44 UniRef50_C7Z3X5 Predicted protein n=3 Tax=Sordariomycetes RepID=... 180 2e-44 UniRef50_Q075M8 Plastid 50S ribosomal protein L4 family (Fragmen... 180 3e-44 UniRef50_Q6ME62 Putative 50S ribosomal protein L4 n=3 Tax=Parach... 179 4e-44 UniRef50_C8V2I4 50S ribosomal protein L4 (AFU_orthologue; AFUA_5... 179 5e-44 UniRef50_A2R423 Contig An14c0190, complete genome n=6 Tax=Tricho... 179 5e-44 UniRef50_O46895 50S ribosomal protein L4, chloroplastic n=1 Tax=... 178 1e-43 UniRef50_A8Q8Q6 Ribosomal protein L4/L1 family protein n=1 Tax=B... 177 2e-43 UniRef50_A8Z669 50S ribosomal subunit protein L4 n=3 Tax=Candida... 176 3e-43 UniRef50_B2WIG6 50S ribosomal protein L4 n=5 Tax=Leotiomyceta Re... 176 6e-43 UniRef50_Q0INA7 Os12g0488600 protein n=1 Tax=Oryza sativa Japoni... 175 8e-43 UniRef50_Q1CRU2 50S ribosomal protein L4 n=81 Tax=Epsilonproteob... 174 2e-42 UniRef50_D2IS95 Ribosomal protein L4 n=1 Tax=Cryptomonas paramec... 173 3e-42 UniRef50_Q06RI4 23S ribosomal protein L4 n=1 Tax=Brucella ceti R... 173 4e-42 UniRef50_B4CUX4 Ribosomal protein L4/L1e n=1 Tax=Chthoniobacter ... 173 5e-42 UniRef50_B2XTF4 50S ribosomal protein L4 n=2 Tax=Heterosigma aka... 172 5e-42 UniRef50_UPI000180C8CE PREDICTED: similar to mitochondrial ribos... 172 5e-42 UniRef50_B3E0I5 50S ribosomal protein L4 n=1 Tax=Methylacidiphil... 171 1e-41 UniRef50_Q4FLL9 50S ribosomal protein L4 n=3 Tax=Candidatus Pela... 169 4e-41 UniRef50_Q4EE76 Ribosomal protein L4/L1 family n=1 Tax=Listeria ... 169 4e-41 UniRef50_Q601L4 50S ribosomal protein L4 n=6 Tax=Mycoplasma RepI... 169 6e-41 UniRef50_Q5KM69 Ribosomal protein L4, putative n=2 Tax=Filobasid... 169 6e-41 UniRef50_Q7RXV7 60S ribosomal protein L4, mitochondrial n=5 Tax=... 167 1e-40 UniRef50_B6HLY3 Pc21g08410 protein n=3 Tax=mitosporic Trichocoma... 167 2e-40 UniRef50_Q6UCS1 Ribosomal protein L4 n=1 Tax=uncultured marine a... 167 2e-40 UniRef50_Q8GM59 50S ribosomal protein L4 n=3 Tax=Mycoplasma RepI... 166 5e-40 UniRef50_B6K4T6 50S ribosomal protein L4 n=1 Tax=Schizosaccharom... 164 2e-39 UniRef50_A8J5Z5 Mitochondrial ribosomal protein L4 (Fragment) n=... 163 3e-39 UniRef50_C5KH52 Putative uncharacterized protein n=1 Tax=Perkins... 161 2e-38 UniRef50_A0CQM2 Chromosome undetermined scaffold_24, whole genom... 160 2e-38 UniRef50_B7FXM9 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 158 8e-38 UniRef50_Q8KTP1 Ribosomal protein L4 n=1 Tax=Candidatus Tremblay... 147 2e-34 UniRef50_C4PXU3 50S ribosomal protein L4, putative n=1 Tax=Schis... 142 7e-33 UniRef50_Q6BKF7 DEHA2F22330p n=4 Tax=Saccharomycetales RepID=Q6B... 137 2e-31 UniRef50_P51998 54S ribosomal protein YmL6, mitochondrial n=12 T... 133 4e-30 UniRef50_B5JYE1 Ribosomal protein L4/L1 family (Fragment) n=1 Ta... 111 1e-23 UniRef50_C8N6G3 50S ribosomal protein L4 n=1 Tax=Cardiobacterium... 105 1e-21 UniRef50_B8KWG3 Ribosomal protein L4/L1e n=1 Tax=gamma proteobac... 96 7e-19 UniRef50_Q05FI6 Ribosomal protein L4 n=4 Tax=Candidatus Carsonel... 72 7e-12 UniRef50_Q7YN80 Ribosomal protein L4 n=1 Tax=Eimeria tenella Rep... 69 8e-11 Sequences not found previously or not previously below threshold: UniRef50_B9WJJ8 60S ribosomal (Large subunit) protein, mitochond... 122 8e-27 UniRef50_C4R1R6 Putative uncharacterized protein n=1 Tax=Pichia ... 118 9e-26 UniRef50_Q6C573 YALI0E20493p n=1 Tax=Yarrowia lipolytica RepID=Q... 112 6e-24 UniRef50_UPI0001923E1E PREDICTED: hypothetical protein n=2 Tax=H... 98 1e-19 UniRef50_C6UN10 Putative 50S ribosomal subunit protein L4 n=1 Ta... 97 3e-19 UniRef50_D2MKV5 Ribosomal protein L4/L1e n=1 Tax=Candidatus Pori... 93 6e-18 UniRef50_UPI0001BCDE73 50S ribosomal protein L4 n=1 Tax=Campylob... 85 1e-15 UniRef50_D2RE65 Ribosomal protein L4/L1e n=2 Tax=Archaea RepID=D... 83 6e-15 UniRef50_D1ZWQ9 Whole genome shotgun sequence assembly, contig_1... 81 3e-14 UniRef50_P60847 50S ribosomal protein L4P n=1 Tax=Nanoarchaeum e... 77 3e-13 UniRef50_Q2NFV7 50S ribosomal protein L4P n=23 Tax=Euryarchaeota... 75 1e-12 UniRef50_Q8TY91 50S ribosomal protein L4P n=2 Tax=Archaea RepID=... 74 2e-12 UniRef50_Q673S8 Ribosomal protein L4 n=7 Tax=environmental sampl... 73 6e-12 UniRef50_A0B9W9 50S ribosomal protein L4P n=8 Tax=Euryarchaeota ... 73 6e-12 UniRef50_Q4UES5 60S ribosomal subunit protein L4/L1, putative n=... 71 2e-11 UniRef50_Q9MTE6 Ribosomal protein L4 n=1 Tax=Toxoplasma gondii R... 71 3e-11 UniRef50_Q4DUP9 Putative uncharacterized protein n=6 Tax=Trypano... 67 3e-10 UniRef50_B5IFI8 Ribosomal protein L4/L1 family n=2 Tax=Acidulipr... 67 3e-10 UniRef50_Q9HIR0 50S ribosomal protein L4P n=3 Tax=Thermoplasmata... 66 6e-10 UniRef50_B0R657 50S ribosomal protein L4P n=8 Tax=Halobacteriace... 64 2e-09 UniRef50_A8TE32 Ribosomal protein L4/L1e n=1 Tax=Methanococcus v... 64 2e-09 UniRef50_P09180 60S ribosomal protein L4 n=185 Tax=Eukaryota Rep... 63 6e-09 UniRef50_C5Y5B1 Putative uncharacterized protein Sb05g022750 n=1... 62 1e-08 UniRef50_B0ETG0 60S ribosomal protein L4, putative n=6 Tax=Entam... 61 4e-08 UniRef50_UPI0000E47D01 PREDICTED: hypothetical protein n=1 Tax=S... 59 7e-08 UniRef50_Q8I431 60S ribosomal protein L4, putative n=7 Tax=Eukar... 59 7e-08 UniRef50_Q5BZ19 SJCHGC04542 protein (Fragment) n=2 Tax=Schistoso... 57 4e-07 UniRef50_A6VHD3 50S ribosomal protein L4P n=18 Tax=Archaea RepID... 57 5e-07 UniRef50_Q4Y0D5 Putative uncharacterized protein (Fragment) n=1 ... 57 5e-07 UniRef50_Q9YFM1 50S ribosomal protein L4P n=7 Tax=Thermoprotei R... 56 5e-07 UniRef50_Q8SRC2 60S RIBOSOMAL PROTEIN L4 n=12 Tax=Apansporoblast... 56 7e-07 UniRef50_D1LYL0 Ribosomal protein L4 n=9 Tax=Fungi/Metazoa group... 56 9e-07 UniRef50_A7AUF0 Ribosomal protein RPL4A n=1 Tax=Babesia bovis Re... 55 2e-06 UniRef50_C3N5S8 50S ribosomal protein L4P n=10 Tax=Sulfolobaceae... 54 3e-06 UniRef50_P36578 60S ribosomal protein L4 n=76 Tax=Eukaryota RepI... 53 4e-06 UniRef50_UPI0001509E5C ribosomal protein L4/L1 family protein n=... 51 2e-05 UniRef50_Q25805 Rpl4 protein n=1 Tax=Plasmodium falciparum 3D7 R... 51 3e-05 UniRef50_UPI0001BCE474 50S ribosomal protein L4 n=1 Tax=Aeromicr... 50 4e-05 UniRef50_UPI000038E236 50S ribosomal protein L4P n=1 Tax=Ferropl... 50 5e-05 UniRef50_A3FPV6 60S ribosomal protein-like, putative n=23 Tax=Eu... 49 1e-04 UniRef50_Q1KYM6 RPL4 (Fragment) n=1 Tax=Streblomastix strix RepI... 48 2e-04 UniRef50_C7DIC7 Ribosomal protein L4/L1e n=1 Tax=Candidatus Micr... 47 4e-04 UniRef50_B9W418 Putative ribosomal protein conserved domain L4/L... 44 0.004 UniRef50_D2EG73 Ribosomal protein L4/L1e n=1 Tax=Candidatus Parv... 43 0.005 UniRef50_B2A4H6 Glycosyl transferase family 2 n=1 Tax=Natranaero... 41 0.018 UniRef50_A9BL16 Rpl1 n=1 Tax=Cryptophyta RepID=A9BL16_9CRYP 41 0.018 UniRef50_A2DAA4 Ribosomal protein, putative n=3 Tax=Trichomonas ... 41 0.018 UniRef50_Q1JE58 LSU ribosomal protein L1E (L4P) n=2 Tax=Streptoc... 39 0.091 >UniRef50_C1TLI0 LSU ribosomal protein L4P n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLI0_9BACT Length = 206 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 119/199 (59%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + ++ L++S F + +HQVVVA A RQGT K R +V G GKKPWRQ Sbjct: 8 TITGESTGELSLSGNVFDVPLHVPAMHQVVVAQLANRRQGTHCTKGRGDVRGGGKKPWRQ 67 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 K TGRAR GS +SPIW GGVT +P+++ QKVNKK+ R A+ S LS+ +R +L+ E Sbjct: 68 KHTGRARHGSSRSPIWVGGGVTHGPKPRNYRQKVNKKVRRLAICSALSQKIRDAQLMGFE 127 Query: 123 KFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 FS+E P TK++ + + +E L+I DEN+ ++ RN+ DV I+ L+ Sbjct: 128 AFSMEKPSTKIMKGLFQSLGVEKPLVIVDHRDENISMSTRNIPGADVLHVDSINVYDLLK 187 Query: 183 FDKVVMTADAVKQVEEMLA 201 V ++A AVK++EE+ A Sbjct: 188 HGHVFISAGAVKKLEEVYA 206 >UniRef50_Q21M56 50S ribosomal protein L4 n=42 Tax=Bacteria RepID=RL4_SACD2 Length = 204 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 136/203 (66%), Positives = 168/203 (82%), Gaps = 3/203 (1%) Query: 1 MELVL---KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGK 57 MEL + + A+ ++VSE FGR+FN+ LVHQ VVA+ AGARQGT+AQK RA V+G GK Sbjct: 1 MELSIATPQGAKGTVSVSEAAFGREFNQDLVHQAVVAFMAGARQGTKAQKNRAAVSGGGK 60 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 KPWRQKGTGRAR+G+I+SP+WRSGGVTFAA P+DHSQK+NKKMYR A++ ILSEL RQ+R Sbjct: 61 KPWRQKGTGRARAGTIRSPLWRSGGVTFAAEPRDHSQKLNKKMYRAAIRCILSELARQER 120 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 L+VVE+F ++APKTK L QKL L DVLII ++ ENL+LAARNLHKVDVRD G+DP Sbjct: 121 LVVVEEFDLDAPKTKDLVQKLAQFDLADVLIIGEDVSENLYLAARNLHKVDVRDVNGLDP 180 Query: 178 VSLIAFDKVVMTADAVKQVEEML 200 VSLI FDKVV+T A+K++EE+L Sbjct: 181 VSLIRFDKVVVTVAALKKLEEVL 203 >UniRef50_C5BQ62 50S ribosomal protein L4 n=266 Tax=Gammaproteobacteria RepID=RL4_TERTT Length = 204 Score = 263 bits (672), Expect = 3e-69, Method: Composition-based stats. Identities = 135/204 (66%), Positives = 168/204 (82%), Gaps = 3/204 (1%) Query: 1 MELVL---KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGK 57 MEL + + A+ + VSE FG++FN+ LVHQ VVAY AG+RQGT+AQK RA V+G GK Sbjct: 1 MELSIVTPQGAKGTVAVSEVAFGKEFNQDLVHQAVVAYMAGSRQGTKAQKNRAAVSGGGK 60 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 KPWRQKGTGRAR+G+I+SPIWRSGGVTFAA+P+D QK+NKKMYR AL+ ILSEL RQ+R Sbjct: 61 KPWRQKGTGRARAGTIRSPIWRSGGVTFAAQPRDFEQKLNKKMYRAALRCILSELARQER 120 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 L+VVE+F ++APKTK+L QKL + L D LI++ ++ ENL+LAARNLHKVDVRD IDP Sbjct: 121 LVVVEEFDLDAPKTKILVQKLAEYDLTDALIVSEQVSENLYLAARNLHKVDVRDVQAIDP 180 Query: 178 VSLIAFDKVVMTADAVKQVEEMLA 201 VSLI F+KVVMT AVK++EE+LA Sbjct: 181 VSLIRFEKVVMTVSAVKKLEEVLA 204 >UniRef50_C1KZH9 50S ribosomal protein L4 n=21 Tax=Bacteria RepID=RL4_LISMC Length = 207 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 89/204 (43%), Positives = 134/204 (65%), Gaps = 3/204 (1%) Query: 1 MELVLKDAQ--SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKK 58 + L+ +D +T+++T FG + NE +V V+++ A RQGT K R+EV G G+K Sbjct: 4 LSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRK 63 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRL 118 PWRQKGTGRAR GSI+SP WR GGV F P+ ++ K+ KK+ R A+KSILS V +++L Sbjct: 64 PWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKL 123 Query: 119 IVVEKFSVEAPKTKLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 +V+E + +APKTK A LK+++++ LI+ EN+ L+ARNL + V A I Sbjct: 124 VVLEGLTFDAPKTKEFAAFLKNISVDTKALIVVAGESENVELSARNLQGITVIPAESISV 183 Query: 178 VSLIAFDKVVMTADAVKQVEEMLA 201 + + DK+++T AV++VEE+LA Sbjct: 184 LEVAKHDKLIITKAAVEKVEEVLA 207 >UniRef50_Q034Y4 50S ribosomal protein L4 n=209 Tax=Bacteria RepID=RL4_LACC3 Length = 207 Score = 256 bits (656), Expect = 2e-67, Method: Composition-based stats. Identities = 77/194 (39%), Positives = 121/194 (62%), Gaps = 1/194 (0%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + +++ + + NE +V VV RQGT A K R+ V+G G+KPWRQKGTGRA Sbjct: 14 NGKVELNDAIWAVEPNENVVFDAVVMQRDSLRQGTHAVKNRSAVSGGGRKPWRQKGTGRA 73 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R GSI+SP WR GG+ F P+ ++ K+ KK+ R A+KS+LS+ V L+VV+ + +A Sbjct: 74 RQGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLAIKSVLSQKVLDSDLVVVDGLNFDA 133 Query: 129 PKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 PKTK A L + + + L++ + +E AARNL V V A GI+ + ++ + K++ Sbjct: 134 PKTKAFATVLDGLKVSDKALVVLEDGNEVAAKAARNLPNVKVVPAEGINVLDVVDYKKLI 193 Query: 188 MTADAVKQVEEMLA 201 +T A++++EE+LA Sbjct: 194 LTQSALQKIEEVLA 207 >UniRef50_C9M934 Ribosomal protein L4/L1 family protein n=2 Tax=Synergistaceae RepID=C9M934_9BACT Length = 207 Score = 256 bits (656), Expect = 2e-67, Method: Composition-based stats. Identities = 83/195 (42%), Positives = 116/195 (59%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + L +S+ FG F+ + +HQVVVA A ARQGT K R EV G G+KPWRQK TG Sbjct: 12 EVVGDLELSDAVFGVPFHSSAIHQVVVAQQANARQGTACAKDRGEVRGGGRKPWRQKHTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR+GSI+SP+W GGV +P+D+ KVNKK+ A++S LS + RL VE FS+ Sbjct: 72 RARAGSIRSPLWAGGGVVHGPKPRDYFLKVNKKVRALAMRSALSVRAGESRLFAVEGFSL 131 Query: 127 EAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 EAP TK + L + LI+ +EN+ +A N+ V V I+ + L+ D + Sbjct: 132 EAPSTKKMLSFLAAVGARKPLIVLDSRNENVIRSAANIQGVKVLHMDSINVLDLVRHDGL 191 Query: 187 VMTADAVKQVEEMLA 201 V T +K++EE+ A Sbjct: 192 VATTAVLKRLEEVYA 206 >UniRef50_C6C186 50S ribosomal protein L4 n=6 Tax=Bacteria RepID=RL4_DESAD Length = 206 Score = 255 bits (652), Expect = 6e-67, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 115/195 (58%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K ++ ++ F ++H VV + A RQGT A KTR G G KPWRQKGT Sbjct: 11 KKEVGSMDLAPEVFEVPVKPEILHLVVRSQLAAKRQGTHATKTRGMKRGGGAKPWRQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR+GS +SP+WR GG TF +P+D+S KVNKK+ R ALK L+ + +++++VV+ Sbjct: 71 GRARAGSTRSPLWRGGGTTFGPQPRDYSFKVNKKVRRLALKMALTSRLSEEKMMVVKNID 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + KTKL + + + LE L++ + D L L+ARN+ + + A ++ ++ + Sbjct: 131 LPEIKTKLFVEVAEALGLEKALVVVKDADNKLLLSARNIPGIKLITADQLNVYDILKARQ 190 Query: 186 VVMTADAVKQVEEML 200 +VM +A + ++E L Sbjct: 191 LVMLENAAQDLQERL 205 >UniRef50_B0RZU1 50S ribosomal protein L4 n=32 Tax=Bacteria RepID=RL4_FINM2 Length = 207 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 83/195 (42%), Positives = 129/195 (66%), Gaps = 1/195 (0%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + L ++E FG D NE +V++VV A RQGT++ KTR+EV G G+KPWRQKGTG Sbjct: 12 ENVGELELNEAIFGVDVNEHVVYEVVKNQLANKRQGTQSAKTRSEVRGGGRKPWRQKGTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GSI+SP WR GGV FA +P+D+S V KK+ R A+KS+L+E V + +IV++K ++ Sbjct: 72 RARQGSIRSPQWRGGGVVFAPKPRDYSYAVPKKVRRLAIKSVLTEKVNDNEMIVLDKLNL 131 Query: 127 EAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 +A TK + LK++ + L++ + D+ L+ + RN+ V + +A I+ + ++ Sbjct: 132 DAISTKKAVEVLKNIKADKKALVVIDKNDDTLYRSFRNIENVAICEAKLINVYDCLKYNS 191 Query: 186 VVMTADAVKQVEEML 200 +V+T DAVK +EE+ Sbjct: 192 LVITTDAVKILEEVF 206 >UniRef50_A3DJH3 50S ribosomal protein L4 n=16 Tax=Clostridiales RepID=RL4_CLOTH Length = 208 Score = 251 bits (643), Expect = 8e-66, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 120/200 (60%), Gaps = 2/200 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + + + FG + N+ +HQV+V A RQGT++ KT++EV G G+KPWRQK Sbjct: 9 INGKVVGEINLRDDIFGIEVNKHAIHQVIVNQLANRRQGTQSTKTKSEVRGGGRKPWRQK 68 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRAR GSI+S W GG+ +P+ + V KK+ R ALKS LS V ++ L+V++ Sbjct: 69 GTGRARHGSIRSAQWVKGGIALGPKPRSYKYAVPKKLRRLALKSALSSKVNENELLVLDS 128 Query: 124 FSVEAPKTKLLAQKLKDMALEDV--LIITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 + + KTK +A LK++ + D +++ + + N+ L+ARN+ + ++ +I Sbjct: 129 LNFDEIKTKQMANVLKNLKVNDTTAVLVLADKNRNVELSARNIPGLKTLFVNTMNVYDII 188 Query: 182 AFDKVVMTADAVKQVEEMLA 201 DK ++T DAV +VEE+ A Sbjct: 189 RHDKFIITKDAVAKVEEVYA 208 >UniRef50_B8I7Y0 50S ribosomal protein L4 n=33 Tax=Firmicutes RepID=RL4_CLOCE Length = 207 Score = 251 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + + +S+ FG D N+ +H VVV A RQGT++ KT++EV G GKKPWRQK Sbjct: 9 MKGEVVGDIQLSDNVFGTDVNKDALHAVVVNQLANRRQGTQSTKTKSEVRGGGKKPWRQK 68 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRAR GSI+S W GG+ +P+ + + KK+ R A+KS L+ V + + V++ Sbjct: 69 GTGRARQGSIRSAQWVKGGIVLGPKPRSYRYTLPKKVKRIAMKSALTSKVSGNEIFVLDA 128 Query: 124 FSVEAPKTKLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 +++A KTK + L ++ ++ L++ +EN+ +ARN+ + ++ ++ Sbjct: 129 LALDAIKTKSMVGVLNNLKVDSSALLVIDSKNENIVKSARNIPGIKTAYVNTLNVFDILK 188 Query: 183 FDKVVMTADAVKQVEEMLA 201 +DK ++T DAV++VEE+ A Sbjct: 189 YDKFIITKDAVEKVEEVYA 207 >UniRef50_Q2LQA0 50S ribosomal protein L4 n=12 Tax=Bacteria RepID=RL4_SYNAS Length = 217 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 122/197 (61%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + K+ S + +++ FG + N+A+++ VV A R GT A K R++V+G GKKPWRQK Sbjct: 19 INKNKVSEIELNDAVFGAEVNDAVIYDVVRMQMASRRFGTAATKGRSDVSGGGKKPWRQK 78 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRARSG+ +SPIWR GG+ F P+D+ V KK+ + AL+S+LS + +L+V++ Sbjct: 79 GTGRARSGTSRSPIWRGGGIVFGPVPRDYKYNVPKKVRKNALRSVLSLKYQGQKLVVLKD 138 Query: 124 FSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 F ++ KTK + + L+ L +T E +E L ++RN+ + + + G++ ++ Sbjct: 139 FPLDEIKTKKFKEVVDRFGLKKALFVTEERNEFLEKSSRNIAGIKMVRSEGLNVYDVLNH 198 Query: 184 DKVVMTADAVKQVEEML 200 + +V+ AVK++E L Sbjct: 199 EHLVIIEPAVKKLEGAL 215 >UniRef50_A5FRZ0 50S ribosomal protein L4 n=5 Tax=Dehalococcoides RepID=RL4_DEHSB Length = 210 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 5/206 (2%) Query: 1 MELVLKDAQSAL----TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME+ + +A + +SE FG FNEALVHQ VA A ARQGT++ KTR EV GS Sbjct: 1 MEIPVYNASGEIVKNINISEDVFGVPFNEALVHQAFVAQQANARQGTQSTKTRGEVQGSS 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 +K +RQKGTG AR G+ +SP+ R GGV F RP+D S+ + KKM R A++ +LS + Sbjct: 61 RKIYRQKGTGNARMGTNRSPVRRHGGVAFGPRPRDFSKDLPKKMRRQAIRCVLSFKLESG 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMA-LEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 L V+++ S + PKT+ +A+ L + + LI D N +ARN+ V A + Sbjct: 121 ELKVIDQLSFDEPKTRDMAKILTALQVISPTLIAVDNPDTNFIKSARNIPAVKTTPANLL 180 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + ++ ++VMT +AV+QVEE+ Sbjct: 181 NISDMLKNKQLVMTEEAVRQVEELWG 206 >UniRef50_C0Q9X2 50S ribosomal protein L4 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=RL4_DESAH Length = 207 Score = 250 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 111/194 (57%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + S +++ F ++++H VV A R GT K R+EV+GS +K +RQKGTG Sbjct: 12 EKVSEAFLADEVFSIPVKKSVLHDVVRMQLARRRSGTAKSKGRSEVSGSTRKLYRQKGTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 ARSGS+KSP+ R GGV F P+ ++ + KK+ ALK LS + + L V++ F++ Sbjct: 72 NARSGSVKSPLRRGGGVIFGPAPRSYAYAIPKKVRALALKMALSSKLAANELSVIDTFAM 131 Query: 127 EAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 ++ KTK + + L++ LI+ D NL L+ARN+ V V G++ ++ +D + Sbjct: 132 DSIKTKEFDSIIDHLGLKNTLIVIDGDDRNLVLSARNIPDVKVIRTEGLNVYDILKYDNL 191 Query: 187 VMTADAVKQVEEML 200 ++ A+K++E Sbjct: 192 LLIESAIKEIEGRF 205 >UniRef50_A9UV13 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UV13_MONBE Length = 229 Score = 250 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 3/203 (1%) Query: 1 MELVLKDAQ-SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKP 59 + ++L+ AQ + + T FG + ++H+VVV A R+G KTR EV G G+KP Sbjct: 4 VRMMLRRAQVGVMELDPTVFGEEIRVDIMHRVVVWQRALWRKGNAKTKTRGEVRGGGRKP 63 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKGTGRAR+GSI+ P WR GGV P+D SQK+ +K+ + ++ +S +Q+ L+ Sbjct: 64 HPQKGTGRARTGSIRVPNWRGGGVVHGPIPRDWSQKLPRKVRQKGVRVAISTRYQQNDLV 123 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALEDVLII--TGELDENLFLAARNLHKVDVRDATGIDP 177 +V+ + KTK LA+ LE L + E NL A RN+ A G Sbjct: 124 IVDDLVLPTLKTKSLAEIAAQHRLESALFVYGHDEDSMNLKWACRNMPAFHATSAAGAHV 183 Query: 178 VSLIAFDKVVMTADAVKQVEEML 200 +++ DK+V++ AV+ +E L Sbjct: 184 YNILKHDKLVLSVSAVRDLERRL 206 >UniRef50_A7RJ96 Predicted protein n=2 Tax=Metazoa RepID=A7RJ96_NEMVE Length = 299 Score = 249 bits (637), Expect = 3e-65, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 1/192 (0%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 + +++ FG + ++H+VVV A R GT K R+EV G G+KPW QKG +AR Sbjct: 98 GMIELNDFVFGENPRIDILHRVVVWQRAKRRAGTACVKDRSEVRGGGRKPWPQKGLNKAR 157 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 GSI++P +R GGV +P+ + + KK+ R L+ LS + Q L +VE F + Sbjct: 158 QGSIRAPHFRGGGVVHGPKPRSYEYTLPKKVRRMGLRVALSVRLAQGDLHIVESFD-DIE 216 Query: 130 KTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 + L L + +++ G +E LF AA +L KVDV + ++ S++ ++++ Sbjct: 217 DDQDLMPILDQRGWQSAVLVDGSPNERLFEAAADLDKVDVFYSENVNVYSILLRHNLILS 276 Query: 190 ADAVKQVEEMLA 201 DAVKQ+EE L Sbjct: 277 LDAVKQLEERLG 288 >UniRef50_Q8VY61 50S ribosomal protein L4 n=18 Tax=Magnoliophyta RepID=Q8VY61_ARATH Length = 300 Score = 249 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 114/196 (58%), Gaps = 2/196 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + + ++ F + ++H VV A +QGT + KT +EV+G+G+KPW QKGTG Sbjct: 99 EEKGFMVLAGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTG 158 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR G+++ P +R G V +P+ H+ K+NK++ R LK L+ + +L+V + + Sbjct: 159 RARHGTLRGPQFRGGCVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGL 218 Query: 127 EAPKTKLLAQKLKDM-ALEDVLIITGE-LDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 KTK + M + VL++ G +DE L LA +NLH V++ + G++ S++ D Sbjct: 219 PTHKTKNIVNYYNQMENTKKVLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHD 278 Query: 185 KVVMTADAVKQVEEML 200 ++M+ DAV ++ E + Sbjct: 279 TLLMSRDAVNKIVERM 294 >UniRef50_Q03ZP4 50S ribosomal protein L4 n=19 Tax=Firmicutes RepID=RL4_LEUMM Length = 207 Score = 248 bits (635), Expect = 7e-65, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 124/192 (64%), Gaps = 1/192 (0%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 + +++ F + N A++ V+ A RQGT A K R+ V+G G+KPW+QKGTGRAR+ Sbjct: 16 EIELNDAVFAIEPNNAVITDAVLMQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRARA 75 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 GSI+ P +R GG+ F P+ ++ ++N+K Y+ ALKS+LS+ V ++L+VV+ S EAPK Sbjct: 76 GSIREPQFRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVADNKLVVVDALSFEAPK 135 Query: 131 TKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 T+ + L +++ + L++ E +EN L+ARNL V V GI+ + ++ DK+V+ Sbjct: 136 TQDFKKVLANLSADKKTLVVVDEDNENAILSARNLANVQVMTTKGINVLDVVNADKLVIV 195 Query: 190 ADAVKQVEEMLA 201 ++++++ LA Sbjct: 196 QSSIEEIQGGLA 207 >UniRef50_D1CFC7 Ribosomal protein L4/L1e n=2 Tax=Bacteria RepID=D1CFC7_THET1 Length = 223 Score = 248 bits (634), Expect = 8e-65, Method: Composition-based stats. Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 6/206 (2%) Query: 1 MELVL----KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L + D S L VS+ FG N A++HQ +V A AR GT +TRAEV+G G Sbjct: 1 MQLPVYNLNGDIVSQLEVSDLVFGIQPNLAVMHQALVRQLANARTGTHDTRTRAEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 +KPWRQKGTGRAR GSI++P WR GGV F P+ + Q++ +KM R AL+S LS+ V ++ Sbjct: 61 RKPWRQKGTGRARQGSIRAPQWRGGGVVFGPHPRSYEQRMPRKMRRLALRSALSQKVAEE 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATG 174 RL+VV S P+TK + L+ + L + VLI T +E++ A NL V V A+ Sbjct: 121 RLLVVTGLSEIEPRTKAMIAALEKLGLAGQKVLIATNGRNESVQKAGSNLPNVKVIHASN 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEML 200 ++ L+ +D + + AV ++E+L Sbjct: 181 LNIADLLKYDYLFLEDGAVNSLQEIL 206 >UniRef50_D0MYG7 50S ribosomal protein L4 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MYG7_PHYIN Length = 277 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 1/192 (0%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 ++++ FG ++ +VV A R GT KTR+EV+GS +KPW+QKG+GRAR Sbjct: 83 GSISMDGEVFGAPDRVDILQRVVRWQLACRRAGTNKTKTRSEVSGSTRKPWKQKGSGRAR 142 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 G I++P WR G +D S + KK+ L+ LS +R+ +L +V+ V+ Sbjct: 143 VGDIRAPQWRGGYRVHGPVLRDFSYSLPKKVRAMGLRVALSTKLREGKLAIVDSLDVDIT 202 Query: 130 KTKLLAQKLKDMALEDVLIITGELDE-NLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 KTK + + L + L + GE E + LA RN+ VD I+ S++ D +++ Sbjct: 203 KTKDMKKLLGGRGWDHALFVGGEEVESSFVLATRNIPHVDTLAQNKINVYSILQKDLLII 262 Query: 189 TADAVKQVEEML 200 T DAVK +EE L Sbjct: 263 TKDAVKYLEERL 274 >UniRef50_B2V7L2 Ribosomal protein L4/L1e n=4 Tax=Hydrogenothermaceae RepID=B2V7L2_SULSY Length = 208 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 6/207 (2%) Query: 1 MELVLKDAQ----SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME + + + + + E F + N+ V +V+ + A R GT + KTRAEV GS Sbjct: 1 MEFNVVNNKNEVIGKINLKEDIFKTEVNQGTVWEVIKWHLASKRAGTASTKTRAEVAGSN 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 +K + QKGTGRAR G IK+ I+ GGV P+D+ + KK+ R LK +L+ + + Sbjct: 61 RKIYPQKGTGRARHGDIKANIFVGGGVAHGPHPRDYYFALPKKVRRKVLKGVLTYKLNNN 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATG 174 LIVV+ F+ EAPKTK + LK LE VL++ E EN+ + RN+ KV + A G Sbjct: 121 ELIVVDDFNFEAPKTKNAIEVLKSFGLENSKVLLVLPEKLENVIKSFRNIPKVKILLAEG 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEMLA 201 I+ ++ DKV++ A+++++E LA Sbjct: 181 INSYDVLNNDKVIIFKSALEKIQERLA 207 >UniRef50_C5JB89 50S ribosomal protein L4 n=1 Tax=uncultured bacterium RepID=C5JB89_9BACT Length = 217 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 +E + DA + + +S FG + L+ +VV A R GT + K R EV G G Sbjct: 2 IEFPVVDAANQTSHTVNLSSHAFGCEVRGDLLTRVVHYQLAKRRLGTASTKRRGEVRGGG 61 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KP+RQKGTG AR G+I++P +R+GGV F P+D+S K+N+K L++ LS + Sbjct: 62 HKPYRQKGTGNARQGTIRAPQYRTGGVVFGPHPRDYSVKMNRKERALGLRTALSAKREAE 121 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALED-VLIITGELDENLFLAARNLHKVDVRDATGI 175 LIV+ F + KT+ + Q L + + VLI+ E DE + +ARNL VDV G+ Sbjct: 122 ELIVLTDFGLTEIKTRSMLQVLTRLNAANSVLIVLPESDERIERSARNLPGVDVIQVDGV 181 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + L+ +K++MT A++++E +A Sbjct: 182 NVYDLLVHEKLLMTEAALQKLEARVA 207 >UniRef50_Q30Z43 50S ribosomal protein L4 n=8 Tax=Bacteria RepID=RL4_DESDG Length = 206 Score = 246 bits (629), Expect = 3e-64, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 115/195 (58%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K LT++ F + +++ VV A A R GT + KTR+ ++G G KPWRQKGT Sbjct: 11 KKETGELTLAPEVFEVEVRPEILNLVVRAQRAAKRAGTHSVKTRSTISGGGAKPWRQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRARSGS +SP+WR G V F +P+D+S KVNKK+ + ALK LS + ++ L+VV+ Sbjct: 71 GRARSGSNRSPVWRGGAVVFGPQPRDYSFKVNKKVRKLALKMALSSRLAEENLMVVKGIE 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + KTK + + + L L++T E+D+ L L+ARN+ + + + ++ + Sbjct: 131 LPEVKTKHMVKVAGALGLGKALVVTPEMDDKLVLSARNIPGITLMTPEQLSVFEILKHAQ 190 Query: 186 VVMTADAVKQVEEML 200 +V+ AV+ V+E L Sbjct: 191 LVLLEGAVEPVQERL 205 >UniRef50_A9NED4 50S ribosomal protein L4 n=11 Tax=Bacteria RepID=RL4_ACHLI Length = 207 Score = 246 bits (628), Expect = 4e-64, Method: Composition-based stats. Identities = 86/195 (44%), Positives = 124/195 (63%), Gaps = 1/195 (0%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + S + +++ FG N+ +++ VV A A RQGT KTRAEV G GKKPWRQKGTG Sbjct: 12 EKISEVALNDAIFGITPNQQVLYDVVNAQRAALRQGTAKTKTRAEVRGGGKKPWRQKGTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GSI+SP WR GG+ F P+ ++ KVN+K+ + ALKS LS V + L++V+ +V Sbjct: 72 RARQGSIRSPQWRGGGIVFGPIPRSYAVKVNQKVKQLALKSALSYHVLAENLVLVDNITV 131 Query: 127 EAPKTKLLAQKLKDMALEDVLII-TGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 PKTKL + + ++ L+D I+ +D+NL LA+ NL VR+ + + L+ F + Sbjct: 132 AEPKTKLFIEIMNNLKLDDRSIVLVDSVDKNLLLASNNLPGAVVREVSQVSVYELLKFKQ 191 Query: 186 VVMTADAVKQVEEML 200 VV+T AVK EE+L Sbjct: 192 VVLTQGAVKYYEEVL 206 >UniRef50_B0U0Y8 50S ribosomal protein L4 n=35 Tax=Gammaproteobacteria RepID=RL4_FRAP2 Length = 207 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 6/206 (2%) Query: 1 MELVLKDAQSA----LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L +K A + V+E F D+NE+L+HQVVVAY AGARQGT+AQKTR+EV+G G Sbjct: 1 MDLNIKSLAGAEAGVVGVAEGVFAADYNESLIHQVVVAYMAGARQGTKAQKTRSEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KPWRQKGTGRAR+G+I+SPI+R GGVTFAA+P+ + QKVN+KMY GA+KSILSELVR D Sbjct: 61 AKPWRQKGTGRARAGTIRSPIFRKGGVTFAAKPKSYKQKVNRKMYSGAVKSILSELVRSD 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITG--ELDENLFLAARNLHKVDVRDATG 174 R+ VVE +E PKTK + + ++DVL + G E +ENL+L++RNL V V D+ Sbjct: 121 RMTVVESLRLETPKTKEFKVIVDSLGVKDVLFVVGVEEFNENLYLSSRNLKNVAVCDSVE 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEML 200 I+PVSL+ F+ VV T A+K++EE L Sbjct: 181 INPVSLVCFENVVFTKQAIKEIEEKL 206 >UniRef50_A0L5X4 50S ribosomal protein L4 n=1 Tax=Magnetococcus sp. MC-1 RepID=RL4_MAGSM Length = 207 Score = 242 bits (618), Expect = 5e-63, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 123/206 (59%), Gaps = 5/206 (2%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 +++ +KDA + + ++E+ FGR+ L+ V A R GT R++V G G Sbjct: 2 IQVPVKDANNQEVRSTELNESVFGREIRADLLGMAVNYQLAKRRLGTATVLGRSDVRGGG 61 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKP+RQKGTG AR G+I++P +R+GG+ F + +D+S K+NKK+ + AL++ LS + Sbjct: 62 KKPYRQKGTGNARQGTIRAPQFRTGGIVFGPQQRDYSHKLNKKVRKLALQTALSVKASSE 121 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMA-LEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 ++VV+K + + KTK + L + ++ EL + L+ARN+ V V D G+ Sbjct: 122 EMVVVDKLELASIKTKEMKALLSTLGAARSTFLVVKELSNEIVLSARNIPNVMVADVDGV 181 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + L+ ++K+V+T +AV+ +EE LA Sbjct: 182 NVYDLLRYEKLVITEEAVRSLEEKLA 207 >UniRef50_D1AWK4 Ribosomal protein L4/L1e n=7 Tax=Fusobacteriaceae RepID=D1AWK4_STRM9 Length = 214 Score = 241 bits (617), Expect = 7e-63, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 124/201 (61%), Gaps = 6/201 (2%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + TVS FG + N+ ++H+V+ A A +R GT + KTR EV+G G+KP+RQKGTG Sbjct: 14 EEKGVTTVSSEIFGLEPNKYVMHEVLTAELAASRAGTASTKTRGEVSGGGRKPFRQKGTG 73 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GS ++P GGV +P+++ +KVNKK+ + ALKS L+ ++ +IV+E + + Sbjct: 74 RARQGSTRAPHMVGGGVVHGPKPRNYDKKVNKKVRKLALKSALAVRIQNGDVIVLEDYML 133 Query: 127 EAPKTKLLAQKLKDMAL--EDVLIIT----GELDENLFLAARNLHKVDVRDATGIDPVSL 180 + PKTK + + + + L I + D NL+L+ RN+ K ++ D + +L Sbjct: 134 DTPKTKAFVNFTEKVNMVEDKKLFIVNDYLEDADWNLYLSVRNIEKTEILDPRELSVYAL 193 Query: 181 IAFDKVVMTADAVKQVEEMLA 201 + F+KVV+T +A+ +EE+L Sbjct: 194 LKFNKVVITKEALATIEEVLG 214 >UniRef50_Q02W25 50S ribosomal protein L4 n=145 Tax=Bacteria RepID=RL4_LACLS Length = 208 Score = 241 bits (617), Expect = 8e-63, Method: Composition-based stats. Identities = 77/194 (39%), Positives = 120/194 (61%), Gaps = 2/194 (1%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 +T++++ FG + NE++V VV++ A RQGT A K R+ V+G GKKPWRQKGTGRAR Sbjct: 15 GEVTLNDSVFGIEPNESVVFDVVISQRASLRQGTHAHKNRSAVSGGGKKPWRQKGTGRAR 74 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 GS +SP WR GG F P+ ++ K+ +K+ + ALKS+ S V +LI V+ AP Sbjct: 75 QGSTRSPQWRGGGTVFGPNPRSYAYKLPQKVRQLALKSVYSTKVADGKLIAVDTLDFAAP 134 Query: 130 KTKLLAQKLKDMALEDVLIIT--GELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 KT A+ + +++E +++ E +E L+ARNL V V A + +++ DK++ Sbjct: 135 KTAEFAKVISALSIERKVLVVLPNEGNEFAELSARNLENVKVTTANSASVLDIVSADKLL 194 Query: 188 MTADAVKQVEEMLA 201 + A+ Q+EE+LA Sbjct: 195 VVQSALTQIEEVLA 208 >UniRef50_B5YG46 50S ribosomal protein L4 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RL4_THEYD Length = 210 Score = 241 bits (616), Expect = 9e-63, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 122/202 (60%), Gaps = 6/202 (2%) Query: 1 MELVLKDAQSAL----TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 +E+ ++D + + V + F +E++VH VVAY A RQGT KTR+EV+G G Sbjct: 2 IEIEIRDINNNIVGKKEVPDIVFNNSASESVVHTAVVAYMANQRQGTHCTKTRSEVSGGG 61 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPWRQK TGRAR GSI+SP+WR GG+ F +P+D+ ++ K+M AL L+ R + Sbjct: 62 KKPWRQKHTGRARHGSIRSPLWRKGGIVFGPKPRDYYIQLPKQMKDTALFKALTMKYRDN 121 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATG 174 +++++ S+ KTK + + LK++ LE VLI E DE + L+ARN+ + V A Sbjct: 122 EILLLDNLSLNRIKTKDMVEILKNLQLEESSVLIALPEKDEKVLLSARNIPYIGVVRAED 181 Query: 175 IDPVSLIAFDKVVMTADAVKQV 196 ++ + FDKVV T + ++ Sbjct: 182 LNAYHVAMFDKVVFTVAGLDKL 203 >UniRef50_A9T3B9 Predicted protein n=3 Tax=Embryophyta RepID=A9T3B9_PHYPA Length = 269 Score = 238 bits (608), Expect = 9e-62, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 3/197 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + T++ F +VH+VV A RQGT + K EV+G+G+KP QKG+G Sbjct: 67 EDKGLATLAGDVFDVPIRPDVVHRVVRWQLAKRRQGTASTKGIHEVSGTGRKPGPQKGSG 126 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GS++ P +R G +P+ H + K++ R LK LS V + +L V + Sbjct: 127 RARHGSLRGPQFRGGATQHGPKPRSHEIGLQKQVRRLGLKVALSSRVAEGKLKVFDSVEP 186 Query: 127 EAPKTKLLAQKLKDM-ALEDVLIITG--ELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 KT+ + + + D+ + VLI+ ++E+L A NLH V+V A G++ S++ Sbjct: 187 PTLKTREMERLIADIEGCKKVLIVDDAETVNESLCRATGNLHYVNVLPAKGLNVYSILQH 246 Query: 184 DKVVMTADAVKQVEEML 200 D +VM+ A++++EE L Sbjct: 247 DTLVMSVGAIRRIEERL 263 >UniRef50_A8IAS4 Ribosomal protein L4/L1e n=4 Tax=Alphaproteobacteria RepID=A8IAS4_AZOC5 Length = 207 Score = 237 bits (605), Expect = 2e-61, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 111/205 (54%), Gaps = 5/205 (2%) Query: 1 MELVLKD----AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 MEL +K ++ +S+ FG + ++H++V A + GT K R+E+ + Sbjct: 2 MELTVKTLDGAEAGSIQLSDAIFGLEPRADILHRMVTWQLARRQAGTHRTKGRSEINRTS 61 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KK ++QKGTG AR G+ +P +R GG F + H+ + KK+ ALK LS + + Sbjct: 62 KKLYKQKGTGNARHGAASAPQFRGGGRAFGPVVRSHAFDLPKKVRALALKHALSSKAKAE 121 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGE-LDENLFLAARNLHKVDVRDATGI 175 ++IV++ ++ KTK L ++ + + + VL++ GE + N LAARNL VDV GI Sbjct: 122 QIIVLDAATLTDAKTKALKERFEKLGIASVLVVDGEQVATNFALAARNLASVDVLPVQGI 181 Query: 176 DPVSLIAFDKVVMTADAVKQVEEML 200 + ++ D +V+T AV +E Sbjct: 182 NVYDILRRDTLVLTRAAVDALEARF 206 >UniRef50_A5IM84 50S ribosomal protein L4 n=51 Tax=Bacteria RepID=RL4_THEP1 Length = 235 Score = 236 bits (602), Expect = 5e-61, Method: Composition-based stats. Identities = 81/218 (37%), Positives = 124/218 (56%), Gaps = 20/218 (9%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 V + L +S+ F D N ++ + V + R GT + KTR EV+G G+KPW QK Sbjct: 9 VKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRKPWPQK 68 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 TGRAR GSI+SPIWR GG+ +P+D S+K+NKKM + AL+S LS R+++L V++ Sbjct: 69 HTGRARHGSIRSPIWRHGGIAHGPKPRDWSKKLNKKMKKLALRSALSVKYRENKLFVLDD 128 Query: 124 FSVEAPKTKLLAQKLKDMAL--EDVLIITGELDE---NLFLAARNLHKVDVRDA------ 172 +E PKTK L + L+++ L + LI+ DE N+ L+ +NL V V A Sbjct: 129 LKLERPKTKFLKEILQNLQLSDKKTLIVLPWKDEGYMNVKLSGKNLPNVKVIIADNPNNS 188 Query: 173 ---------TGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 G++ ++ +D +V+T D V ++EE+L Sbjct: 189 KNGEKAVRIDGLNVFDMLKYDYLVLTQDMVSKIEEVLG 226 >UniRef50_Q1Q137 Strongly similar to 50S ribosomal protein L4 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q137_9BACT Length = 203 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 114/202 (56%), Gaps = 6/202 (2%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME+++ + + + V ++ L+ VV Y A RQGT + KTRAEV+G G Sbjct: 1 MEIIVYNDEGKKIENMQVPDSISDSPVRYKLLRDVVKMYEANKRQGTVSTKTRAEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPW QK TG+AR+GS +SPIWR GGV F +P+D+S + K + AL S LS ++ + Sbjct: 61 KKPWAQKHTGKARAGSSRSPIWRGGGVAFGPKPRDYSYSIPKMAKKQALFSALSSKIKDN 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATG 174 ++VV+K +PKTK + LK + LI+ + E+L ++RN+ V + + Sbjct: 121 EVVVVDKLDFASPKTKHMVSLLKSFGMVGISSLIVISKATESLLKSSRNIPYVRMMECHD 180 Query: 175 IDPVSLIAFDKVVMTADAVKQV 196 ++ ++ K+++T A+ + Sbjct: 181 LNAYEILKPKKILITKQALSSL 202 >UniRef50_P10135 50S ribosomal protein L4 n=9 Tax=Bacteria RepID=RL4_MYCCT Length = 208 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 127/208 (61%), Gaps = 7/208 (3%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L + D + + +++ +G + ++ ++ V++ A RQGT+ KTRAEV+G G Sbjct: 1 MKLQVLDTKGNEIKEIALNDYVWGIEPHQQAIYDTVISQQAALRQGTKKVKTRAEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQ 115 +KPW+QKGTGRAR GSI++P W+ GGVTF P ++ + VNKK+ A +S+LS V++ Sbjct: 61 RKPWKQKGTGRARQGSIRAPQWKGGGVTFGPTPDINYKKSVNKKVRALAFRSVLSLKVKE 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDAT 173 + L++V+KF P TK + +K++ ++ LI+T E +E + ++ N+ V A Sbjct: 121 NNLVIVDKFDFAKPSTKEMVVVMKNLKIDDQKTLIVTKEKEELVVKSSNNITGVKTISAN 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEMLA 201 ++ L+ K+++T +A VEE+ A Sbjct: 181 QLNVFDLLNATKLLITEEAAIAVEEVYA 208 >UniRef50_D2SHA2 Ribosomal protein L4/L1e n=2 Tax=Actinobacteria (class) RepID=D2SHA2_9ACTO Length = 292 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 117/198 (59%), Gaps = 2/198 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + + ++T+ F N +L+HQVVVA A ARQGT A KTR +V+G G KP+ Sbjct: 20 VRTPAGETSGSVTLPGELFDASANVSLMHQVVVAQLAAARQGTHATKTRGQVSGGGIKPY 79 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTGRAR GSI++P + GG +P+D+SQK KKM AL+ LS+ R++R+ V Sbjct: 80 RQKGTGRARQGSIRAPQFTGGGTVHGPQPRDYSQKTPKKMKAAALRGALSDRARENRVHV 139 Query: 121 VEKF-SVEAPKTKLLAQKLKDMALEDVLIITGELDENL-FLAARNLHKVDVRDATGIDPV 178 V F +AP+TK L+ + +++ + D+ L +++ RN+ +V + +A ++ Sbjct: 140 VSTFVDGDAPRTKAALATLESITRAKRVLVVLDRDDVLNWVSLRNVPQVHLLEAGQLNTY 199 Query: 179 SLIAFDKVVMTADAVKQV 196 ++ D+VV T A+ + Sbjct: 200 DVLVADEVVFTEAALAEF 217 >UniRef50_C1SPI5 Ribosomal protein L4 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPI5_9BACT Length = 208 Score = 233 bits (595), Expect = 2e-60, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 112/196 (57%), Gaps = 2/196 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS-GKKPWRQKGT 65 + + +S+ +L+H+VV+ A R GT + RA++ G G KPWRQKGT Sbjct: 12 ETVGTIDLSDEIMSYPVKSSLMHEVVIMQLANRRAGTHSTLNRAKMKGGRGAKPWRQKGT 71 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRARSGS KSPIWR G F +P+D+S + KK + ALKS + + +++ S Sbjct: 72 GRARSGSRKSPIWRGGATCFGPQPRDYSYSMPKKKIKNALKSAIRAKTEAGAVHILDALS 131 Query: 126 VEAPKTKLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 VE KTK + LK+ A + VLI+ ELD+ A RN+ VD+ D G++ +I Sbjct: 132 VENGKTKEAVEILKNFAADRKVLIVFKELDDKAVCAFRNIPYVDLLDVNGLNVYDVINSR 191 Query: 185 KVVMTADAVKQVEEML 200 +++ DAV++++E+L Sbjct: 192 TILVCKDAVERIQEVL 207 >UniRef50_A6GCH8 50S ribosomal protein L4 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCH8_9DELT Length = 218 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 4/203 (1%) Query: 2 ELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGK 57 +L +KD + + VS+ F + E L+ +VV A R GT K R+EV G+ Sbjct: 3 KLNVKDLEGNDVAEIEVSDEVFAAEVKEHLLWEVVRWQRAKKRAGTAKTKERSEVHGTRS 62 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 K +RQKGTG AR GS + ++R GG RP+D++ VNKK GAL+S LS + Sbjct: 63 KMYRQKGTGNARHGSRRVNVFRGGGQVHGPRPRDYTFSVNKKARAGALRSALSLRASEGN 122 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 L+V+ F V KT+ LA L + L++ G + +L +ARNL G++ Sbjct: 123 LVVIRDFEVPDAKTRNLAAALGKLNAPKSLLVDGGDNMSLARSARNLPTAQHIVPEGVNV 182 Query: 178 VSLIAFDKVVMTADAVKQVEEML 200 ++ F K++++ +++ +E L Sbjct: 183 YDILRFPKLLISESSLRALEARL 205 >UniRef50_A5USI8 LSU ribosomal protein L4P n=8 Tax=Chloroflexi RepID=A5USI8_ROSS1 Length = 223 Score = 232 bits (593), Expect = 5e-60, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 101/189 (53%), Gaps = 1/189 (0%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + +S+ FG + N ++HQ + A AR GT R EV GS +K +RQKGTG Sbjct: 11 EEVGVIQISDYVFGIEPNVPVMHQAMERQRANARLGTHNTLGRGEVEGSTRKLYRQKGTG 70 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GSI++P + GG+ P+ +++ + +KM R A++S LS R + +++ + Sbjct: 71 RARQGSIRAPHRKGGGIAHGPHPRKYTKAMPRKMRRLAVRSALSARYRDGAITFLDRLTF 130 Query: 127 EAPKTKLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 E P+TK + L + L LI+ + DE + +A NL V A ++ + L+ D Sbjct: 131 EKPRTKDMIAVLNALNLTGKTLIVLDQKDEYVRRSANNLPNVKTLLAHYLNVIDLLTHDH 190 Query: 186 VVMTADAVK 194 +VM AV Sbjct: 191 IVMLQAAVD 199 >UniRef50_Q110A8 50S ribosomal protein L4 n=17 Tax=Cyanobacteria RepID=RL4_TRIEI Length = 212 Score = 232 bits (593), Expect = 5e-60, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 118/200 (59%), Gaps = 7/200 (3%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + T++ + +VH+ + A RQGT + KTR+EV G G+KPWRQKGTG Sbjct: 12 EEVGQATLNLRVAKEESAAHIVHRSLRLQMANNRQGTASTKTRSEVRGGGRKPWRQKGTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS- 125 RAR+GSI+SP+WR GGV F +P+D+S K+N+K R AL + R + LIV+E S Sbjct: 72 RARAGSIRSPLWRGGGVIFGPKPRDYSHKMNRKEKRLALSTAFQS--RSEDLIVIEDLSE 129 Query: 126 -VEAPKTKLLAQKLKDMALE---DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 PKTK L Q + ++ ++++ E EN++L+ RN+ K+ + A ++ ++ Sbjct: 130 QFTKPKTKELVQAITRWGIDIQAKIVLVLPEKQENVYLSGRNIAKLKIILANNLNIYDIL 189 Query: 182 AFDKVVMTADAVKQVEEMLA 201 A DK++ T A+ +++E+ Sbjct: 190 AADKIIATVTAIAKIQEVYG 209 >UniRef50_Q2GL58 50S ribosomal protein L4 n=15 Tax=Rickettsiales RepID=RL4_ANAPZ Length = 208 Score = 230 bits (588), Expect = 2e-59, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 5/206 (2%) Query: 1 MELVLKDA----QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME+ + + ++ ++ FG + ++ +VV A R GT K ++++G+ Sbjct: 1 MEVNIVNIANEVVGSIDLNPQVFGLEPRRDVLKEVVNWQLAKRRAGTHKAKGISDISGTT 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KP+RQK TGRAR GS++SP +R G V F P+ H +NKK+ R LK LS V + Sbjct: 61 AKPYRQKHTGRARQGSLRSPQFRGGAVIFGPVPRSHEYSLNKKVRRLGLKVALSMKVAAN 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 +L+V++ V+ KT + L+++ E + A RNL VD+ GI Sbjct: 121 KLVVLDSLDVDLKKTADAKGVFGNFAGHSSYLVVSESCKEEVVRACRNLRGVDLLKCVGI 180 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + + ++ D V++T D VK +E L+ Sbjct: 181 NVLDILKHDCVILTVDTVKSLEGRLS 206 >UniRef50_C1A6Q6 50S ribosomal protein L4 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6Q6_GEMAT Length = 213 Score = 230 bits (587), Expect = 2e-59, Method: Composition-based stats. Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 2/185 (1%) Query: 13 TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGS 72 + E TF N ++HQ V A+ A RQGT KTR EVTG +KPW+QKGTGRAR GS Sbjct: 24 QLPEGTFDGIVNVPVMHQAVKAFLANRRQGTAKTKTRGEVTGGNQKPWKQKGTGRARQGS 83 Query: 73 IKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTK 132 ++P W GG F +P+ ++Q V K++ A KS L+ R++ ++VVE + APKTK Sbjct: 84 TRAPNWPGGGTVFGPQPRSYTQIVPKQVRVLARKSALNARARENAVVVVEALNFSAPKTK 143 Query: 133 LLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 + + + + + VL++T + N++L+ARNL + V + + ++ D VV+ + Sbjct: 144 AMTELFTKLGVLGKKVLVLTDGVKPNVYLSARNLGQAHVMPYSDANTYHILWSDVVVIES 203 Query: 191 DAVKQ 195 A+ Q Sbjct: 204 SALTQ 208 >UniRef50_D0LIC4 Ribosomal protein L4/L1e n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIC4_HALO1 Length = 215 Score = 230 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 100/198 (50%), Gaps = 4/198 (2%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + + + F + +E L +VV A R GT + K R EV GS KP+RQKGTG Sbjct: 12 ETVGDIDLDDAIFAEEVHEHLFWEVVKWQRARRRAGTHSTKRRGEVRGSNIKPYRQKGTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR G K+P W GG F +P+ + + KK+ + AL+S LS ++ +L+V++ F V Sbjct: 72 RARQGDRKAPHWVGGGSVFGPKPRSYDYALPKKVRKKALRSALSLRAKEQKLVVLDAFPV 131 Query: 127 EAPKTKLLAQKLKDMAL----EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 E KT+ + L + VLI+ + +L RNL G++ ++ Sbjct: 132 EGGKTRNVVSALAALGAAHTDNRVLIVDAGDNLDLIRGTRNLRGSKWLAPEGLNVYDILD 191 Query: 183 FDKVVMTADAVKQVEEML 200 +VMT+ VK VE L Sbjct: 192 HSTLVMTSATVKAVERAL 209 >UniRef50_B6WX21 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WX21_9DELT Length = 207 Score = 229 bits (585), Expect = 4e-59, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 106/195 (54%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K LT+S F + +++ VV A A R GT KTRA V+G G KPW+QKGT Sbjct: 11 KQECGELTLSADVFEVEARPEILNLVVRAQMAAKRAGTHMAKTRAFVSGGGVKPWKQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRARSGS +SP+WR G + F +P+D+S KVN K+ A+K LS + + L+VV+ Sbjct: 71 GRARSGSNRSPVWRGGAIVFGPQPRDYSFKVNSKVRALAMKMALSSRLAAENLLVVKGIE 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + KTK A+ + L LI+T E E L +ARN+ + + + + ++ + Sbjct: 131 LPEAKTKHFAKVAGTLGLNKALIVTAEESEALTRSARNIPGITLTTPDRLSVLEILRHKQ 190 Query: 186 VVMTADAVKQVEEML 200 +V+ AV V+ Sbjct: 191 LVLLEGAVAPVQARF 205 >UniRef50_Q00YX6 50S ribosomal protein L4 (ISS) n=2 Tax=Ostreococcus RepID=Q00YX6_OSTTA Length = 275 Score = 229 bits (584), Expect = 5e-59, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 25/217 (11%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + T+ F + + H+VV A AR GT KTR EV+G+ +K QKG GRA Sbjct: 53 RGEATLPGRIFDQPLRVDVAHRVVRWQRAKARAGTHKTKTRGEVSGTTRKARPQKGQGRA 112 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R G +++P R GGV P+ H+ + KK+ R LK LS + ++++V+ F+ Sbjct: 113 RVGMLRAPQMRGGGVAHGPVPRSHAYALPKKVRRMGLKVALSARAAEGKIVIVDSFAGME 172 Query: 129 PKTKLLAQKLKDMALE----------DVLIITG---------------ELDENLFLAARN 163 PKT+++ + L+ + + LI+ G +E + +++RN Sbjct: 173 PKTRVMKETLERLTGDMGLAAGGKFHSTLIVDGEFEETSEEDDDEETYSPNEIVRISSRN 232 Query: 164 LHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 L V+V G + S++ +VMT ++Q+ L Sbjct: 233 LPHVEVLPQIGANVYSILRRRTLVMTKSGLEQLIRRL 269 >UniRef50_B8IYH3 50S ribosomal protein L4 n=6 Tax=Desulfovibrionales RepID=RL4_DESDA Length = 210 Score = 229 bits (584), Expect = 6e-59, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 106/195 (54%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K +T++ F + +++ V A A R GT KTRA V+G G KPW+QKGT Sbjct: 11 KQESGEVTLASDVFEIEVRPEILNLVARAQMAAKRAGTHNVKTRAFVSGGGAKPWKQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR+GS +SPIWR G +TF P+D++ KVN K+ ALK LS + + L+VV+ Sbjct: 71 GRARAGSNRSPIWRGGAITFGPSPRDYTFKVNSKVRSLALKMALSSRLAAESLMVVKGIV 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + KTK A+ + L LI+ E + +L +ARN+ + + + + ++ + Sbjct: 131 LPEAKTKHFAKVADTLGLTKALIVAPEENADLTRSARNIPGLTLTTVDRLSVLEILKHKQ 190 Query: 186 VVMTADAVKQVEEML 200 +V+ AV+ V+ Sbjct: 191 LVLLEGAVESVQARF 205 >UniRef50_Q39Y05 50S ribosomal protein L4 n=11 Tax=Desulfuromonadales RepID=RL4_GEOMG Length = 220 Score = 228 bits (583), Expect = 6e-59, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 114/197 (57%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + K+ + +S+ F D E L+H+ V A R GT K RA V+G GKKP++QK Sbjct: 22 INKNKVGEMDLSDAVFNGDVREYLIHEAVKVQLANRRAGTVGVKNRAAVSGGGKKPFKQK 81 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTG+AR G I++P + GGV F + + ++ +NKK + A++S LS L ++++L V++ Sbjct: 82 GTGQARQGCIRAPHYVGGGVAFGPQAKTYALSMNKKARKAAVRSALSMLFKENKLSVLDC 141 Query: 124 FSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 S+ + TK LK + L+I E + NL L+ARN+ V V A ++ ++ F Sbjct: 142 LSLPSISTKGFVGVLKTFDVTKTLVIIDEANTNLELSARNVKDVKVLKAEHLNVFDIVKF 201 Query: 184 DKVVMTADAVKQVEEML 200 + +++T AV+++E L Sbjct: 202 NNIILTQSAVRKIEGAL 218 >UniRef50_Q12GX0 50S ribosomal protein L4 n=18 Tax=Proteobacteria RepID=RL4_POLSJ Length = 206 Score = 228 bits (582), Expect = 9e-59, Method: Composition-based stats. Identities = 103/195 (52%), Positives = 140/195 (71%), Gaps = 1/195 (0%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 A S + V +T FGR++NE+L+HQVVVA+ A ARQGTRAQK R +V S KKP++QKGTGR Sbjct: 12 ASSKVDVPDTVFGREYNESLIHQVVVAFQANARQGTRAQKDREQVRHSTKKPFKQKGTGR 71 Query: 68 ARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 AR+G SP+WR GG F P ++ +QK+NKKMYR + SI S+L R+ RL VV+ +V Sbjct: 72 ARAGMTSSPLWRGGGRIFPNMPDENFTQKINKKMYRAGMASIFSQLAREGRLAVVDSLAV 131 Query: 127 EAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 ++PKTK+LA K K M L VL+I +DENL+LA+RNL + V + DPVSL+ + KV Sbjct: 132 DSPKTKVLADKFKAMNLNSVLVIADVVDENLYLASRNLVNILVVEPRYADPVSLVHYKKV 191 Query: 187 VMTADAVKQVEEMLA 201 ++T A+ Q++EM A Sbjct: 192 LVTKAAMDQLKEMFA 206 >UniRef50_Q2S3R3 50S ribosomal protein L4 n=2 Tax=Rhodothermaceae RepID=RL4_SALRD Length = 215 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 67/191 (35%), Positives = 111/191 (58%), Gaps = 2/191 (1%) Query: 13 TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGS 72 + T F + N+ ++ V A RQGT K R EV GSG+K +RQKGTG AR G Sbjct: 18 ALDPTVFDIEPNDHIIWLDVKRIQAHQRQGTSKTKERGEVRGSGRKLYRQKGTGNARVGD 77 Query: 73 IKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTK 132 +SPI R GG ARP+D++ +N+K R A +S LS D + V+E FS++ P T+ Sbjct: 78 AQSPIRRGGGRAHGARPRDYAHDLNQKEKRLARRSALSYKAANDNIQVIENFSLDRPDTR 137 Query: 133 LLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 L + + +E D+L+ T E++ ++L+++NL V+V++ I+ V ++ D V++ Sbjct: 138 GLTDLFELLGVEGQDILLATAEVEREVYLSSQNLPDVNVQEVQSINTVDILDADVVLLQE 197 Query: 191 DAVKQVEEMLA 201 A+ + ++L+ Sbjct: 198 GALDWLTDVLS 208 >UniRef50_B4U745 50S ribosomal protein L4 n=4 Tax=Aquificaceae RepID=RL4_HYDS0 Length = 200 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 4/195 (2%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + + + + F + + ++ VV A RQGT + KTRAEV S KK QKGTG A Sbjct: 3 VNGVELRDDVFNVEPKKHILWDVVRWQLAKRRQGTHSTKTRAEVNCSKKKIMPQKGTGNA 62 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SV 126 R G+ + I+ GGV P+D+ K++KK + AL LS + + + V+E S+ Sbjct: 63 RHGARSANIFVGGGVVHGPTPRDYEYKLSKKYRKIALAMALSTKAKNNSVYVLESLLSSL 122 Query: 127 EAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 PKTK+ + LK+ + + VL++T + ++ + + +N+ V G++ ++ D Sbjct: 123 GKPKTKVAFELLKEKGISDKKVLVVTKDQNDIVSKSFKNIPNTKVLPVVGLNVYDILWAD 182 Query: 185 KVVMTADAVKQVEEM 199 +++ A++++ E Sbjct: 183 ALLIEQGALEKIYER 197 >UniRef50_A4FPM4 50S ribosomal protein L4 n=49 Tax=Actinobacteria (class) RepID=RL4_SACEN Length = 228 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 107/198 (54%), Gaps = 2/198 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + + + F N AL+HQVVVA A RQGT A KTR +V+G GKKP+ Sbjct: 7 VRTPDGKTDGTVELPAEIFDVQANIALMHQVVVAQLAAGRQGTHATKTRGQVSGGGKKPY 66 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTG AR GSI++P + GG +P+D+SQ+ KKM AL+ LS+ VR +L V Sbjct: 67 RQKGTGNARQGSIRAPQFTGGGTVHGPQPRDYSQRTPKKMKVAALRGALSDRVRAGQLHV 126 Query: 121 VEK-FSVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 V E P TK ++ + VL++ + +E +L+ RNL V + D + ++ Sbjct: 127 VSHVVGGEQPSTKQARTAVRTWTEAKRVLVVLNKSEETSWLSLRNLQNVHLIDPSQLNTY 186 Query: 179 SLIAFDKVVMTADAVKQV 196 ++ D VV T A ++ Sbjct: 187 DVLVNDDVVFTKAAFERF 204 >UniRef50_Q1H4N6 50S ribosomal protein L4 n=174 Tax=Proteobacteria RepID=RL4_METFK Length = 208 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 118/208 (56%), Positives = 148/208 (71%), Gaps = 7/208 (3%) Query: 1 MELVLKDAQS-----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS 55 ME+ L D L VSE TFGR+FNEALVHQVVVAY A AR TRAQ TRAEV+ + Sbjct: 1 MEIKLIDKNGRPAKAGLAVSEATFGREFNEALVHQVVVAYQANARTATRAQLTRAEVSHT 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVR 114 KKPW QKGTGRAR+G S IWR GG F P ++ S K+N+K YR ++SILSELVR Sbjct: 61 TKKPWNQKGTGRARAGMSSSTIWRGGGRAFPNTPDENFSHKINRKAYRAGVRSILSELVR 120 Query: 115 QDRLIVVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDAT 173 QDRL VE+F+V+ PKTK L +K+K + E +L++ + DENL+L+ARNL V V +A Sbjct: 121 QDRLSAVEEFAVDTPKTKQLVEKIKGLGYNEGLLVLVDKFDENLYLSARNLPHVLVLEAQ 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEMLA 201 +DPVSL+ F +V+ TA AVK++EEMLA Sbjct: 181 YVDPVSLVRFPQVLATAGAVKKLEEMLA 208 >UniRef50_P61061 50S ribosomal protein L4 n=1 Tax=Bdellovibrio bacteriovorus RepID=RL4_BDEBA Length = 209 Score = 226 bits (578), Expect = 2e-58, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 104/194 (53%), Gaps = 1/194 (0%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K+ ++ ++ F + ++H VV A RQGT KT+ V+G GKKP++QKGT Sbjct: 11 KEKVGSVELAADVFETPVKKEVLHTVVQWQLAARRQGTHMTKTKGLVSGGGKKPFKQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 G AR GS +S + GG F +P+ ++ + KK+ R L LS L ++ +L +V+ + Sbjct: 71 GGARQGSSRSILMPGGGTAFGPQPRSYAFVLPKKVRRLGLSMALSHLQKEGKLFIVDSMA 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 E KT L ++L+ L+ +++ +D+ A++NL G++ L+ +D Sbjct: 131 SEG-KTAELNKRLQAFGLKKAVLVDSVVDDKFNRASKNLPTFKYFPVEGLNVFDLLKYDA 189 Query: 186 VVMTADAVKQVEEM 199 V+T D+V ++ + Sbjct: 190 AVITKDSVAKIVDR 203 >UniRef50_Q2JFH5 50S ribosomal protein L4 n=91 Tax=Actinobacteridae RepID=RL4_FRASC Length = 245 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 101/189 (53%), Gaps = 2/189 (1%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 ++ + F N L+HQVVVA A ARQGT KTR EV G G+KP+RQKGTGRAR Sbjct: 27 GSVELPGGVFDVPLNIPLIHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPYRQKGTGRAR 86 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF-SVEA 128 GS+++P + GG P+ + Q+ KKM AL+ LS+ R +R+ VV S E Sbjct: 87 QGSLRAPQFTGGGTVHGPTPRRYDQRTPKKMKAAALRGALSDRARNNRVHVVSSLVSGET 146 Query: 129 PKTKLLAQKLKDMA-LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 P TK L+ +A VL++ DE + + RN+ V + D ++ ++ D VV Sbjct: 147 PSTKSAVTALRTIADTRRVLVVASRSDELTWKSLRNVAAVHLLDPGQLNTYDVLVSDDVV 206 Query: 188 MTADAVKQV 196 DA+ Sbjct: 207 FIEDALAAF 215 >UniRef50_C7PU72 Ribosomal protein L4/L1e n=11 Tax=Bacteroidetes RepID=C7PU72_CHIPD Length = 212 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 4/197 (2%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K + + E FG + N +++ V Y A RQGT KTRAEV G+ +K +QKGT Sbjct: 11 KKTGRTIELPEEIFGVEPNNHVIYLAVKQYLAAQRQGTHKVKTRAEVKGASRKLHKQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 G +R G+I++P+++ GG F +P + K+N+K+ A S LS +++ +IVVE + Sbjct: 71 GGSRKGNIRNPLYKGGGTIFGPKPHKYDIKLNRKVKDLAKISALSTKAKENSIIVVEDLT 130 Query: 126 VEAPKTKLLAQKLKDMAL----EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 ++ PKTK A L ++ + L + E ++N++L+ RN+ VD + I+ ++ Sbjct: 131 LDTPKTKAFAGILNNLKVNVSGRKTLFVLPEYNDNVYLSLRNIPTVDSVMLSDINTYEIM 190 Query: 182 AFDKVVMTADAVKQVEE 198 + +V T A K E Sbjct: 191 NSNVLVFTESAAKIFTE 207 >UniRef50_B9XFN0 Ribosomal protein L4/L1e n=1 Tax=bacterium Ellin514 RepID=B9XFN0_9BACT Length = 208 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 1 MELVLKDAQSALTVSETT-FGRDFN---EALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L ++D + F N VH VVAY A R GT KT EV GS Sbjct: 1 MKLKIQDIKGNSQGEMDVKFSLVTNGRGTQAVHDAVVAYRAAQRSGTACAKTVGEVAGSN 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPW+QKGTGRAR+GS++SP+WR GGV F RP+D S+K+++ + A + L+E + Sbjct: 61 KKPWKQKGTGRARAGSVRSPLWRGGGVVFGPRPRDFSKKISRSTKQLAFRKALTERLNAG 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDV-LIITGELDENLFLAARNLHKVDVRDATGI 175 ++VV+ F + + KTK L + +E L++ LD NL A+RN+ KV+V + + Sbjct: 121 DVLVVDNFKLASAKTKEFVGVLTALKVEGTALVVADALDANLSRASRNVAKVEVATSDSV 180 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + ++ DK+V T A ++VEE L Sbjct: 181 NTYQILRSDKLVFTRSAFEKVEERLG 206 >UniRef50_B4JAB3 GH11428 n=2 Tax=Coelomata RepID=B4JAB3_DROGR Length = 923 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ V + + + F ++ + + KTRAEV G G+KPW Sbjct: 699 VDAVKERKVGMMELHPDVFAAQPRVDIIQENIEWQRKYRYVSMAHTKTRAEVRGGGRKPW 758 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKG GRAR GSI+SP+++ GG+ R P H + L S LS + QD L Sbjct: 759 PQKGMGRARHGSIRSPLFKGGGIVHGPRSPTSHFYMLPFYTRVLGLTSTLSVKLAQDDLH 818 Query: 120 VVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGE--LDENLFLAARNLHKVDVRDATGID 176 ++E + + + + + VLII + EN+ A ++ V++ + G++ Sbjct: 819 IIENVELPTRDAQFIRDLIAERNWGPSVLIIDKQEMFPENICYATDSIGYVNLMPSFGLN 878 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 S++ D +V+T +AVK +E+ L Sbjct: 879 VYSMLKHDTLVLTVEAVKHLEQRL 902 >UniRef50_B4KI26 GI14673 n=2 Tax=Drosophila RepID=B4KI26_DROMO Length = 911 Score = 223 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ V + + + F ++ + + KTRAEV G G+KPW Sbjct: 687 VDAVTERKVGLMELHPDVFAAQPRVDVIQENIEWQRKYRYVSMAHTKTRAEVRGGGRKPW 746 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKG GRAR GSI+SP+++ GGV R P H + L S LS + QD L Sbjct: 747 PQKGMGRARHGSIRSPLFKGGGVIHGPRSPTTHFYMLPFYKRVMGLTSTLSVKLAQDDLH 806 Query: 120 VVEKFSVEAPKTKLLAQKLKDMAL-EDVLIIT--GELDENLFLAARNLHKVDVRDATGID 176 ++E + + + +++ VLI+ EN+ A ++ V++ A G++ Sbjct: 807 IIEDVEIPTKDAQFIRDLIQERNWGPSVLIVDKHDVFPENICYATDSIGYVNLMPAYGLN 866 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 S++ D +V+T +AVK +EE L Sbjct: 867 VYSMLKHDTLVLTVEAVKHLEERL 890 >UniRef50_A5FZW4 50S ribosomal protein L4 n=180 Tax=Alphaproteobacteria RepID=RL4_ACICJ Length = 216 Score = 223 bits (570), Expect = 2e-57, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 1/194 (0%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + E F ++ +VV A R GT K EV+G+ KKP+RQKGTG Sbjct: 11 GSAGKAELPEEYFAATPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTTKKPYRQKGTG 70 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 AR GS+++P +R+GG +DH +NKK+ R L S LS+ + + +L+V++ + Sbjct: 71 NARQGSLRAPQFRTGGAVHGPVVRDHGYSLNKKVRRLGLISALSQKLAEGKLVVLDTVA- 129 Query: 127 EAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 KT L KLK + L++ +DE A+RNL +DV G + ++ D + Sbjct: 130 GVSKTSELNVKLKKLGWGRTLVVDAVVDEGFARASRNLIGIDVLPVVGANVYDILQHDTL 189 Query: 187 VMTADAVKQVEEML 200 +TA ++ ++ L Sbjct: 190 AITAAGLEGLKRRL 203 >UniRef50_B2KEM0 Ribosomal protein L4/L1e n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEM0_ELUMP Length = 211 Score = 223 bits (568), Expect = 3e-57, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 118/207 (57%), Gaps = 6/207 (2%) Query: 1 MELVLKDAQSALT----VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME + + Q + E F N +H+VV A+ A R+GT KTRAEV+G+G Sbjct: 1 METKVFNIQGKEEGTTALPEVLFSAKPNPTFLHEVVTAFLANQRRGTADVKTRAEVSGTG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPW+QKGTGRAR GS++SPIWR GGV F P+ Q + + R AL LS + Sbjct: 61 KKPWKQKGTGRARHGSMRSPIWRHGGVAFGPTPRSFRQYLPAQKRRAALIQALSAKYAEG 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDM-ALEDVLIITGELDEN-LFLAARNLHKVDVRDATG 174 +IV ++ KTK+LA LK M A L++T E +N +FL+ARN+ + + A+ Sbjct: 121 NVIVFNDGGIKESKTKVLATALKAMEAGRKPLVLTTEKTDNKVFLSARNIAGLSLIPASD 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEMLA 201 ++ ++ K+++T DA++ ++ A Sbjct: 181 VNAYVVLNSSKIIITKDALETLKSTFA 207 >UniRef50_A3EVS0 Ribosomal protein L4 n=2 Tax=Leptospirillum sp. Group II RepID=A3EVS0_9BACT Length = 218 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 5/205 (2%) Query: 1 MELVLKDAQSALTVSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKP 59 M + D+ +L ++ + + N L+H+++ AG R GT + KTR EV+G GKKP Sbjct: 5 MVALKDDSLKSLEINVSAEEAELINIPLLHEIIKMQRAGIRSGTASTKTRGEVSGGGKKP 64 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 +RQKGTGRAR GS ++P WR G + F RP+D+ + K A+K+ + + L Sbjct: 65 YRQKGTGRARQGSTRAPQWRGGAIIFGPRPRDYFYRQPAKKVVLAVKNAIFSHLENKSLY 124 Query: 120 VVEKFSVEAPKTKLLAQKLKDMAL----EDVLIITGELDENLFLAARNLHKVDVRDATGI 175 VV+ V + KTK L +L E +LII L EN++ + RN+ +++ + Sbjct: 125 VVDSLDVPSRKTKDLIALFNKWSLFPGEERILIIDNGLSENIYYSCRNIPGLEILLPHQV 184 Query: 176 DPVSLIAFDKVVMTADAVKQVEEML 200 +P L+ DKV+++ +A + + +L Sbjct: 185 NPYDLLIADKVLVSKEAFENMNVLL 209 >UniRef50_A5CCL1 50S ribosomal protein L4 n=18 Tax=cellular organisms RepID=RL4_ORITB Length = 210 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 4/202 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 +L++ + + ++ + F + ++ V+ A GT KT + V+G+ KKP++QK Sbjct: 8 LLQEIEKEVELNPSVFCLKYRPDIIKLVIDWQLAKRMSGTHCTKTISGVSGTTKKPFKQK 67 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTG AR GS++S R GG++ + H V KK+ + ALK LS + ++LIVV+ Sbjct: 68 GTGNARQGSLRSVQMRGGGISHGPVVRSHEFDVPKKIRKQALKYALSYKLSVNKLIVVDD 127 Query: 124 FSVEAPKTKLLAQKLKDMALED----VLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 F++ + KT +L LK + I +D N FLA+RNL ++V G +P Sbjct: 128 FNIGSNKTAVLKNLLKKYNYSNYSGFFCIDDQNVDRNFFLASRNLFNLNVVAQIGANPYD 187 Query: 180 LIAFDKVVMTADAVKQVEEMLA 201 ++ D V++T A K +E LA Sbjct: 188 IMKHDCVMVTLSAAKSLEMRLA 209 >UniRef50_C8W7Z8 Ribosomal protein L4/L1e n=7 Tax=Coriobacteriaceae RepID=C8W7Z8_ATOPD Length = 208 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 114/197 (57%), Gaps = 2/197 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 +S +G + N +VHQVVV A ARQGT + K R EV+G G KP+RQKGTG Sbjct: 12 KKVGTTELSSDVYGIEPNIPVVHQVVVCQDASARQGTHSTKNRHEVSGGGVKPYRQKGTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GSI++ W GGV F P+ H++++N KM + A++S+LS V L++V+ Sbjct: 72 RARQGSIRAGQWTGGGVIFGPTPRSHARRINNKMVKLAMRSVLSGKVADSELVLVDSLEF 131 Query: 127 EAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 P TK L+++ +E V +I + D N +L+ RNL KV + + + LI Sbjct: 132 AQPSTKQAKAALQNLGIEGKRVTVIVPDDDVNTYLSFRNLPKVSIFGVSEVTTRFLIDNG 191 Query: 185 KVVMTADAVKQVEEMLA 201 +VM+AD KQ+ E+LA Sbjct: 192 ALVMSADVAKQLGEVLA 208 >UniRef50_Q83FY7 50S ribosomal protein L4 n=7 Tax=Micrococcineae RepID=RL4_TROWT Length = 248 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 2/187 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 +A L + F D N L+HQVVVA A RQGT K+RAEV+GSG+KP+RQKGTG Sbjct: 13 NAVGTLQLVGHLFDSDPNLHLIHQVVVAQQAAFRQGTHKTKSRAEVSGSGRKPFRQKGTG 72 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 AR GS ++P R GGV P+++ + KKM + AL L+ R R+ +V+ F Sbjct: 73 NARCGSTRAPQMRGGGVVHGPVPRNYVHRTPKKMIKAALAGCLTNRARAGRVHIVDSFG- 131 Query: 127 EAPKTKLLAQKLKDMALEDVLIITGELDENL-FLAARNLHKVDVRDATGIDPVSLIAFDK 185 + P + L L++ + +++ + + RN+ V + ++ ++ D Sbjct: 132 DTPSVADALTLFQITGLSSKLLVVAQASDSVAYRSVRNIPGVRLVHVGQLNSYDVLRSDD 191 Query: 186 VVMTADA 192 V+ T A Sbjct: 192 VLFTRGA 198 >UniRef50_B0CPN7 Predicted protein n=2 Tax=Agaricales RepID=B0CPN7_LACBS Length = 253 Score = 222 bits (566), Expect = 6e-57, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 2/193 (1%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 S + + T F ++H V Y RQG+ KTR EV GSG K RQKGTGRAR Sbjct: 40 SLVVLDPTVFNHPIRRDVLHLCVTHYLDSLRQGSANTKTRGEVRGSGAKLHRQKGTGRAR 99 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 G +SPI GGV F +P+D S K+ +K+ ++ LS +++ ++ ++ Sbjct: 100 VGDGQSPIRVGGGVAFGPKPRDFSTKLPRKVIEMGMRVALSVKMKERQVGIMASLDWPNA 159 Query: 130 KTKLLAQKLKDMALEDVLIITGE--LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 KT+ L QK+ + L L +TGE + L A N+ V V A ++ ++ + ++V Sbjct: 160 KTRNLVQKIDLLGLRKTLFVTGEGVVPAGLKQAMANIPLVQVITADEVNVYEIMKWQRLV 219 Query: 188 MTADAVKQVEEML 200 + AV+ E L Sbjct: 220 LDVKAVEFFERTL 232 >UniRef50_Q605B3 50S ribosomal protein L4 n=3 Tax=Gammaproteobacteria RepID=RL4_METCA Length = 205 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 96/195 (49%), Positives = 140/195 (71%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 A L VS+ FG+ FNE+LVHQ+VV Y A AR GT+AQK+R++V+G GKKPW+QKG+G Sbjct: 11 GAAGDLEVSDKVFGQGFNESLVHQLVVGYLAAARSGTKAQKSRSDVSGGGKKPWKQKGSG 70 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 AR+G+ +SP+WR+GGVTFAA +++ QK+NKKMYR A++SI SEL+RQ RL+V + Sbjct: 71 HARAGTTRSPLWRTGGVTFAASNRNYRQKLNKKMYRAAVRSIFSELLRQGRLVVSDGIVP 130 Query: 127 EAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 +PKT+ LA KLK +I+ +LD NL L++RNL V + A + PV L+ ++V Sbjct: 131 TSPKTRELAAKLKSFGEGYTVILAEQLDLNLALSSRNLPNVSINTADTLSPVDLVHAERV 190 Query: 187 VMTADAVKQVEEMLA 201 + T+ A++++E L+ Sbjct: 191 IATSSAIRKLEVRLS 205 >UniRef50_D1NBS4 Ribosomal protein L4/L1e n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBS4_9BACT Length = 209 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 109/195 (55%), Gaps = 2/195 (1%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + E + E VH VVAY AG R GT KTR EV+G G KP+RQKG GRA Sbjct: 15 VGEYVIPEGVIELEKGEQAVHDTVVAYLAGQRAGTACTKTRGEVSGGGAKPFRQKGMGRA 74 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R+GS +SP+W GG F RP+ ++KVNKK+ + ALK LSE + + L++++KF + Sbjct: 75 RAGSSRSPVWVGGGTIFGPRPRSFAKKVNKKVLQLALKRALSERIVEGDLVLLDKFELAD 134 Query: 129 PKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 KT+ LK++ + + V+I ELD A N+ V +R ++ L+ F K+ Sbjct: 135 HKTRNAFAILKNLNVANETVMISLPELDAASVCATGNIPNVVLRKTDTVNVYELLRFKKL 194 Query: 187 VMTADAVKQVEEMLA 201 + T DA+ + LA Sbjct: 195 LFTKDALDAFIQRLA 209 >UniRef50_C1F641 50S ribosomal protein L4 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=RL4_ACIC5 Length = 222 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 76/198 (38%), Positives = 115/198 (58%), Gaps = 4/198 (2%) Query: 7 DAQSALTVSETTFG-RDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 +L +++ F + NEAL+ + V Y A RQGT A K + V+GSGKK W+QKGT Sbjct: 12 KKVGSLELADELFAPSEVNEALLWEAVKHYRASLRQGTHATKNKKLVSGSGKKLWKQKGT 71 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR GS++SP+WR GG +P+ + KK GAL+S L+ + +LIVVE F Sbjct: 72 GRARVGSVRSPLWRHGGTVHGPQPRSYDYAFPKKKLMGALRSALAAKLADGKLIVVESFE 131 Query: 126 VEAPKTKLLAQKLKDM-ALEDVLII--TGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 V PKTKL L + A L++ + L ENL+L ARNL V++ + P L+ Sbjct: 132 VSEPKTKLYRTALDKLEANRSTLLVESSQSLTENLYLGARNLANVELVLNNEVHPYDLLR 191 Query: 183 FDKVVMTADAVKQVEEML 200 +++ + + A+++++E L Sbjct: 192 YERAIFSRAAIEKLQESL 209 >UniRef50_Q1D774 50S ribosomal protein L4 n=3 Tax=Myxococcales RepID=RL4_MYXXD Length = 207 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 S + +S+ FG + N L ++V R+GT K + V+G GKKPW+QKGTG Sbjct: 12 KKVSEIELSDDVFGTEPNAHLFYEVAKMQQINRRRGTVGVKNTSLVSGGGKKPWKQKGTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GSI++ W GG A + +D+ + +K+ RGALKS LS ++ LI+++ FS+ Sbjct: 72 RARQGSIRASHWVGGGKAMAPKARDYFYRPPRKVRRGALKSALSLRAQEKTLIILDGFSL 131 Query: 127 EAPKTKLLAQKL-KDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 +APK+K + L K + L++ L+I + + NL + RNL K DV G++ +++ Sbjct: 132 DAPKSKQAFEVLTKRLKLQNALVIDDKGNTNLHRSVRNLAKFDVLPPEGLNLEAVLRHSH 191 Query: 186 VVMTADAVKQVEEMLA 201 +V+T+ A K +E L+ Sbjct: 192 LVLTSAAAKTLEGALS 207 >UniRef50_Q9BYD3 39S ribosomal protein L4, mitochondrial n=28 Tax=Coelomata RepID=RM04_HUMAN Length = 311 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 5/200 (2%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 ++ + F ++HQV + R KTRAEV G G+KPW QKGT Sbjct: 74 QERVGLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGT 133 Query: 66 GRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 GRAR GSI+SP+WR GGV R P + + K+ LK L+ + QD L +++ Sbjct: 134 GRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSL 193 Query: 125 SVEAPKTKLLAQKLKDMAL-EDVLIIT---GELDENLFLAARNLHKVDVRDATGIDPVSL 180 + + L + + VL++ E+ +++ A L ++ A G++ S+ Sbjct: 194 ELPTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVGLNVHSM 253 Query: 181 IAFDKVVMTADAVKQVEEML 200 + +V+T V +E+ L Sbjct: 254 LKHQTLVLTLPTVAFLEDKL 273 >UniRef50_C6XHJ0 50S ribosomal protein L4 n=2 Tax=Rhizobiaceae RepID=C6XHJ0_LIBAP Length = 207 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 1/195 (0%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + ++VSE F + ++ +V+ + R G K R+EV +G K + QKGTG Sbjct: 12 EDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYTGSKMYVQKGTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR S +R GG F P + KK+ AL+ LS+ + ++V++ Sbjct: 72 RARHSSKSVSQFRGGGKAFGPVPIIGVHALPKKVRSLALRHALSDKFCSNDIMVIDNLVS 131 Query: 127 EAPKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + KTK L + + + L + LII G +LD N LAARN+ +++ GI+ ++ K Sbjct: 132 KECKTKYLVTRFRALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQGINVYDILRCSK 191 Query: 186 VVMTADAVKQVEEML 200 +V++ A++ +E+ Sbjct: 192 LVLSKSAIEALEDRF 206 >UniRef50_B3EUM2 50S ribosomal protein L4 n=71 Tax=cellular organisms RepID=RL4_AMOA5 Length = 210 Score = 219 bits (560), Expect = 3e-56, Method: Composition-based stats. Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 7/207 (3%) Query: 1 MELVL-----KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS 55 MEL + KD + +S+T FG N+ ++ V A RQGT K R E+ GS Sbjct: 1 MELSVLQYTGKDTGRKVVLSDTIFGITPNDHAIYLDVKNILANKRQGTHKSKERGEIAGS 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQ 115 KK +QKGTG AR+GSIKSPI+R GG F +P+D+ K+NKK+ + A KS L+ +Q Sbjct: 61 TKKIKKQKGTGTARAGSIKSPIFRGGGRVFGPKPRDYGFKLNKKLKKLARKSALTYKAQQ 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDAT 173 + V+E FS E PKTK+ + L+++ + + L+I +D+NL LA+RNL V Sbjct: 121 GNISVLEDFSFEMPKTKMYLEMLQNLNMADQKTLLILPAVDKNLVLASRNLPNTSVALVE 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEML 200 I+ L+ K++++ A+ ++ E Sbjct: 181 QINTYDLLYSKKILISETALSKLTENF 207 >UniRef50_C0QVZ7 50S ribosomal protein L4 n=3 Tax=Brachyspira RepID=RL4_BRAHW Length = 215 Score = 219 bits (558), Expect = 5e-56, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 13/212 (6%) Query: 1 MELVLK----DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME+V+ D+ L + + F + N L+++ + A RQGT + KTRAEV+G G Sbjct: 1 MEVVILNENGDSVGNLEIVDEIFKSEVNNNLLYEAIKNELANRRQGTHSTKTRAEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPWRQKGTGRAR+GS +SPIW GG T +P+D+S ++ KKM R AL S+LS + Sbjct: 61 KKPWRQKGTGRARAGSTRSPIWVGGGKTHTPKPRDYSYRLPKKMKRKALLSVLSLKYGSN 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKL---KDMALEDVLIITGELD------ENLFLAARNLHKV 167 L V E F+ +APKTK +A + K+ V + G+ + L L+ RN+ + Sbjct: 121 VLKVFEDFTFDAPKTKRMASFISKVKEPNTRKVAFVVGKDESLGDNYNKLLLSLRNIKDL 180 Query: 168 DVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 + +A + L D+V T A+ ++ Sbjct: 181 KLVNADSMSIHPLFYADEVYFTKTALSKLNAR 212 >UniRef50_C6XLG6 Ribosomal protein L4/L1e n=7 Tax=Alphaproteobacteria RepID=C6XLG6_HIRBI Length = 309 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQ--SALTVSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGK 57 ++++ DA+ ++ +++ FG + ++ ++V A + GT +TR+EV + Sbjct: 3 LDVINLDAKKAGSVELNDAVFGIEDVRPDILQRMVRYQLAKRQAGTHKTQTRSEVNKTKT 62 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 + RQKG G AR GS +PI+ GGV + + H+ + KK ALK LS V+ Sbjct: 63 RFGRQKGGGGARHGSRNAPIFVGGGVAHGPKVRSHAHDLTKKFRALALKHALSAKVKDSS 122 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGE-LDENLFLAARNLHKVDVRDATGID 176 LIV+E+ +V KTK L + + + L++ L+I GE LD+N AARN+ +DV G++ Sbjct: 123 LIVLEEAAVSEVKTKALRAQFEALGLKNALVIGGESLDDNFAKAARNIPNIDVLPFAGLN 182 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 ++ +V+T +AV V Sbjct: 183 VYDVMRRHTLVLTKEAVDAVHARF 206 >UniRef50_B3QY25 50S ribosomal protein L4 n=15 Tax=Bacteroidetes/Chlorobi group RepID=RL4_CHLT3 Length = 210 Score = 218 bits (557), Expect = 6e-56, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 7/208 (3%) Query: 1 MELVLKDAQSA-----LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS 55 ME+ + + A + + F + N+ ++ V + A QGT KTR+EV+G Sbjct: 1 MEVKVLNKDGAETGETVELKPVIFEIEPNDHAIYLDVRSIMANQHQGTHKVKTRSEVSGG 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQ 115 G+KP+RQKGTG AR GS +SP+ GG F +P D+ +NKKM R A S LS + Sbjct: 61 GRKPYRQKGTGNARRGSSRSPVMIGGGAIFGPKPHDYVVGINKKMKRLARISALSYKAKN 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDAT 173 + +IV+E + KTK + LK + L + L++ ++ ++ + RN+ K+ + +A Sbjct: 121 NEIIVMEDYVPSEIKTKEVVSFLKSLGLNEKKTLLLMPSKNDVMYKSGRNISKLSILEAN 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEMLA 201 L+ +++ A++ +E L Sbjct: 181 KASTYDLLNNKTLLIQKSALETLERSLG 208 >UniRef50_Q4JT48 50S ribosomal protein L4 n=7 Tax=Actinomycetales RepID=RL4_CORJK Length = 217 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 2/190 (1%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + + + F + + AL+HQVV A A RQGT A KTR V+G G+KP+RQKGTGRA Sbjct: 16 NGTVELPASIFDAEASVALMHQVVTAQLAAKRQGTHATKTRGMVSGGGRKPFRQKGTGRA 75 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF-SVE 127 R GSI++P + GG +P+D+SQ+ KKM AL+ L++ VR DR+ VVE+ + Sbjct: 76 RQGSIRAPHFTGGGTVHGPQPRDYSQRTPKKMKAAALRGALTDRVRHDRIHVVEELVPGQ 135 Query: 128 APKTKLLAQKLKDMALED-VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 P TK ++ + VL++ D + + NL +V ++ ++ D V Sbjct: 136 TPSTKAARAFIERLTDRKSVLVVLTREDVTAWKSVNNLPQVHTLVNDQLNTYDVLNADDV 195 Query: 187 VMTADAVKQV 196 V + +A+ Sbjct: 196 VFSVEALNAF 205 >UniRef50_Q9V3D0 Mitochondrial ribosomal protein L4 n=14 Tax=Endopterygota RepID=Q9V3D0_DROME Length = 296 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 4/203 (1%) Query: 2 ELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWR 61 + V + + + F ++ + V + KTRAEV G G+KPW Sbjct: 73 DAVAERKVGLIELHPDVFAAQPRVDIIQENVEWQSKYRYVSMAHTKTRAEVRGGGRKPWP 132 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 QKG GRAR GS++SP+ + GGV R P H + L S LS + QD L + Sbjct: 133 QKGGGRARHGSLRSPMLKGGGVVHGPRSPTTHFYMLPFYKRVLGLTSTLSVKLAQDDLHI 192 Query: 121 VEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGE--LDENLFLAARNLHKVDVRDATGIDP 177 ++ + + L + + VLI+ + N+ A+ +L V++ G++ Sbjct: 193 IDNVDIPTGDAEFLKDLIAERNWGPSVLIVDEDHMFPANICQASDDLGYVNLMPTFGLNV 252 Query: 178 VSLIAFDKVVMTADAVKQVEEML 200 S++ D +V+T AVK +E+ L Sbjct: 253 YSMLKHDTLVLTVAAVKHLEQRL 275 >UniRef50_Q1IX73 50S ribosomal protein L4 n=10 Tax=Bacteria RepID=RL4_DEIGD Length = 213 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 10/201 (4%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + ++ ++ ++ + + N ++H+VV AG R+GT + KTRAEV+ SGKK + Sbjct: 4 INVIGQNGGRSIDLDLP----EVNPHVLHEVVTWQLAGRRRGTASTKTRAEVSRSGKKMY 59 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 QKGTG AR G P + GGV F +P+ +S + +K+ + L L++ +Q +L Sbjct: 60 SQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYSYTLPRKVRQLGLAMALADRQQQGKLTA 119 Query: 121 VEKFSVEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 V+ F ++ KTK K+ L E VLI+T DE AARN+ V G++ Sbjct: 120 VDGFGLDG-KTKSFVSWAKENGLDGSERVLIVTD--DELTRRAARNVAWATVLPVAGLNV 176 Query: 178 VSLIAFDKVVMTADAVKQVEE 198 ++ +++V+ A A++ +E Sbjct: 177 YDILRHERLVIDAVALEPAQE 197 >UniRef50_Q2JV82 50S ribosomal protein L4 n=17 Tax=Cyanobacteria RepID=RL4_SYNJA Length = 326 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 7/200 (3%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + +S + +++ + ARQG KTRAEV G G+KPWRQKGTG Sbjct: 12 ETVGSAELSLKVARPETASHILYLALRRQMTNARQGNAHTKTRAEVRGGGRKPWRQKGTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF-- 124 RAR+GSI+SP+WR GGV F R ++++ +N+K + AL++ L V + LIVVE F Sbjct: 72 RARAGSIRSPLWRKGGVIFGPRKREYNLAMNRKERQLALRTALQSRV--EDLIVVEDFQD 129 Query: 125 SVEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 + PKT+ +AQ L + + L+I E E + A RN+ +V + ++ L+ Sbjct: 130 QLNPPKTRAVAQALLRWGVMEDQSALLIVAERSEAVERAVRNIARVKLIGLDQLNVFDLL 189 Query: 182 AFDKVVMTADAVKQVEEMLA 201 D V++T A+++++ Sbjct: 190 NVDWVLITTSALEKLKARWG 209 >UniRef50_C7MFF5 LSU ribosomal protein L4P n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MFF5_BRAFD Length = 312 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 107/195 (54%), Gaps = 2/195 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 ++ + + F N L+HQVVVA A ARQGT KTRAEV G GKKPW+QK Sbjct: 12 PAGKKSGSVELPASIFDVQTNVPLIHQVVVAQQAAARQGTHKAKTRAEVRGGGKKPWKQK 71 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRAR GS+++P + GG P+D+SQ+ KKM AL+ LS+ R R+ VV Sbjct: 72 GTGRARQGSLRAPQFTGGGTVHGPVPRDYSQRTPKKMKAAALRGALSDRARNGRVHVVSS 131 Query: 124 -FSVEAPKTKLLAQKLKDMALEDVLIITGELDENL-FLAARNLHKVDVRDATGIDPVSLI 181 + TK + Q L +++ L++ D++L L++RNL V A ++ ++ Sbjct: 132 LLEGDVASTKAVRQTLSNVSDRRHLLVVVRRDDDLGALSSRNLPTTHVLYADQVNTYDVM 191 Query: 182 AFDKVVMTADAVKQV 196 D VV TA A++ Sbjct: 192 LSDDVVFTAGALEDF 206 >UniRef50_A9BCP6 50S ribosomal protein L4 n=25 Tax=cellular organisms RepID=RL4_PROM4 Length = 211 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 7/197 (3%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 T+ L+H+ VV A +RQGT + TR+EV G G+KP++QKGTGRAR Sbjct: 15 GKATLDLKVAKETTAVDLIHRAVVRQQAHSRQGTASTLTRSEVRGGGRKPYKQKGTGRAR 74 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVE 127 GSI++P+ GG+ F +P+ S +N+K R AL++ L + R + L++V+ F +++ Sbjct: 75 QGSIRTPLRPGGGIIFGPKPRSFSLGMNRKERRLALRTAL--MARINDLMIVQDFGTALK 132 Query: 128 APKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 PKT+ + + L + VLII + E + + RN+ +V V A ++ L+ + Sbjct: 133 VPKTREIVEALSRFGIADDAKVLIILAQPSEIIIRSVRNIERVKVIGADQLNVFDLLNAN 192 Query: 185 KVVMTADAVKQVEEMLA 201 +V+ A+ ++E+ Sbjct: 193 SLVIGEKALSTIKEVYG 209 >UniRef50_Q0EW37 50S ribosomal protein L4 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW37_9PROT Length = 207 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Query: 13 TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGS 72 ++ FG D + A VH+V A A+ R GT K R+EV+G GKKPW+QKGTGRAR+GS Sbjct: 18 ELNPAVFGLDADAAFVHRVYAALASAQRGGTSKVKDRSEVSGGGKKPWKQKGTGRARAGS 77 Query: 73 IKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 + WR GG + ++NKK R AL LS+ +R+ +L VV+K + KT Sbjct: 78 SRQAQWRHGGTAHGPSADTSFATRINKKERRRALCLALSDCLREGKLTVVDKLELAEIKT 137 Query: 132 KLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTAD 191 K L + + LI+ GE + + L+ RN+ + ++ L+ +VV+T+ Sbjct: 138 KAFVDTLGALGADSGLIVLGESNNAVELSGRNVPNTRIVLDGQVNLHDLLKSKRVVLTSA 197 Query: 192 AVKQVEEMLA 201 A+ +EE LA Sbjct: 198 AIDNLEERLA 207 >UniRef50_UPI0001C30EB8 ribosomal protein L4/L1e n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30EB8 Length = 210 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 102/191 (53%), Gaps = 1/191 (0%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 + + + F FN LVH+ V + RQGT + KTR V G G KPWRQKGTGRAR Sbjct: 10 GEVVLDDLAFTAKFNGPLVHETVRSELNALRQGTSSTKTRGNVRGGGAKPWRQKGTGRAR 69 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 +GS +SPIW+ GG F P+ ++ KVN+K R AL+S LS + L V + + +AP Sbjct: 70 AGSSRSPIWKGGGTVFGPSPRHYTFKVNRKARRAALRSALSVQADRGSLAVFDATTFDAP 129 Query: 130 KTKLLAQKLKDMALEDVLIITGELDE-NLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 TK ++ L D + ++ + DE N L+ RNL ++ V +I +++ Sbjct: 130 STKTASKLLADWGQPNPTLVLLDADEANAGLSFRNLERILVLPVEDAGVADVIGAASLLI 189 Query: 189 TADAVKQVEEM 199 + A+ Q+ Sbjct: 190 SETALAQITAR 200 >UniRef50_P51313 50S ribosomal protein L4, chloroplastic n=3 Tax=Eukaryota RepID=RK4_PORPU Length = 214 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 73/179 (40%), Positives = 117/179 (65%), Gaps = 7/179 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 LVH+ +V + RQG+ KTR+EV G G+KPWRQKGTGRAR+GSI+SP+WR GGV F Sbjct: 36 LVHRALVKQSNEKRQGSANTKTRSEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGGVIFG 95 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS--VEAPKTKLLAQKLKDMALE 144 +P+ ++K+NKK + AL++ L+ +VVE F + PKTKL + + L+ Sbjct: 96 PKPRSFAKKMNKKESQLALRTALNNK--SVNTLVVENFDTYFQKPKTKLFIEAITRWNLD 153 Query: 145 ---DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 +L+I + D N++L+ RNL+ V++ A ++ ++L+A KV++T DA+ +++E+ Sbjct: 154 LNKKLLVIVDKKDLNVYLSIRNLYNVEIISADTLNIMALLAAHKVIITVDALSKIQEVY 212 >UniRef50_B7J468 50S ribosomal protein L4 n=4 Tax=cellular organisms RepID=RL4_ACIF2 Length = 205 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 81/198 (40%), Positives = 126/198 (63%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 V S + +++ FG +NEAL+HQVVVA AG R QK RA V G G+KPW+QK Sbjct: 8 VTTGKSSEIEIADGVFGVPYNEALLHQVVVAQMAGMRSANAVQKNRAAVRGGGRKPWKQK 67 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRAR+GSI+SPIWR GG F ++++QKVNKKM+ GA++++L+EL+RQ RL ++++ Sbjct: 68 GTGRARAGSIRSPIWRGGGRAFPGGNENYTQKVNKKMWAGAMRTVLAELLRQGRLQIIQQ 127 Query: 124 FSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 P+++L L ++VL++ GE+ NLFL RN +V + + P L+ + Sbjct: 128 EDFGEPRSRLGRDWLSRAGGDNVLLVMGEVPLNLFLGLRNFPRVGIAGWQDVGPADLLQY 187 Query: 184 DKVVMTADAVKQVEEMLA 201 +V++ +A ++ E+ Sbjct: 188 GRVLLDVEAAARLGEVYG 205 >UniRef50_Q1ISC1 50S ribosomal protein L4 n=2 Tax=Acidobacteria RepID=RL4_ACIBL Length = 217 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 111/195 (56%), Gaps = 2/195 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + +++ FG NE L+ + V Y AG +GT A K + V+G+GKK W+QKGTG Sbjct: 12 EKVGSFELADEVFGA-VNEDLLWEAVKHYRAGQHRGTHATKNKKLVSGAGKKLWKQKGTG 70 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GSI+SP+WR GG +P+ + +K GAL+S L+ + +L VVE F V Sbjct: 71 RARVGSIRSPLWRHGGTVHGPQPRSYDYAFPRKKLLGALRSALAAKLADGKLTVVESFDV 130 Query: 127 EAPKTKLLAQKLKDMALEDV-LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + PK + L + ++ L+I ++NL L++RNL V++ + P L+ +D+ Sbjct: 131 KEPKANAFRKTLAGLKVDKTALLIESAENKNLELSSRNLKGVELVAGNAVHPYHLLRYDR 190 Query: 186 VVMTADAVKQVEEML 200 V+ A+++++ L Sbjct: 191 AVIARPALEKLQNSL 205 >UniRef50_B1GZ84 50S ribosomal protein L4 n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ84_UNCTG Length = 206 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 117/204 (57%), Gaps = 6/204 (2%) Query: 1 MELVLKDAQSA----LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME + DA+ + + + FG+ + AL+H+V +AY R GT KTR EV+ SG Sbjct: 1 METTVYDAKGEEKGKIELPDF-FGKKVSVALLHEVTMAYLNNLRAGTHKTKTRGEVSFSG 59 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KPW+QKGTG AR+G SP+WR GG+ F +P+++ K++K+ + +L S ++ Sbjct: 60 AKPWKQKGTGNARAGQKNSPLWRKGGIIFGPQPRNYYTKISKRKKKLSLDMAFSAQLKNG 119 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRDATGI 175 +IVV+ V KTK +A+ +K++ + I+ D + +AARN+ V V + I Sbjct: 120 NIIVVDSVKVSEVKTKKVAELIKNLKVGGKKIVFAIPSDTDFKVAARNIKNVIVENIKNI 179 Query: 176 DPVSLIAFDKVVMTADAVKQVEEM 199 + ++ DK+V+T +AV ++E Sbjct: 180 NAYQVLWADKLVITPEAVDLIKER 203 >UniRef50_UPI000186E58D mitochondrial 50S ribosomal protein L4, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E58D Length = 286 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 101/204 (49%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ + + + + ++ + FG L++ + + +R + KTRAE+ GSG+KP Sbjct: 71 VDSIKEQKRGLVQLNPSIFGTIPRLDLIYYNIKWQSLYSRVILYSAKTRAEMKGSGRKPH 130 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKGTGRAR GS ++P + GG R P + ++ L S LS + Q+ L Sbjct: 131 PQKGTGRARLGSRRAPQVKGGGTCHGPRNPTSYYFRIPLYKKIHGLTSTLSAKLAQNDLH 190 Query: 120 VVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGE--LDENLFLAARNLHKVDVRDATGID 176 VV+ ++ ++ + +K+ VLI+ + + N+ +A ++ + + G++ Sbjct: 191 VVDNINIPTDDSQYMIDLMKERNWGSSVLIVDSDDIMPRNISIATDSIGYITLMPVYGLN 250 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 ++ D +V+T A+ ++E L Sbjct: 251 VYGMLKHDTLVLTLSALDELENKL 274 >UniRef50_UPI00017927E1 PREDICTED: similar to GA19152-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI00017927E1 Length = 308 Score = 209 bits (532), Expect = 5e-53, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ + ++ + + + FG ++H+ VV K AEV S KKPW Sbjct: 83 LDTIKENPSTIIDLHPQVFGSRPRIDIIHENVVWQKKYKYVSYANTKVTAEVNMSSKKPW 142 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKG GRAR G+ +SP++R G V R H + L S LS + QD L Sbjct: 143 PQKGQGRARHGTRRSPLFRGGSVIHGPRSHTTHFYMLPFYKRVYGLTSTLSVKLIQDDLH 202 Query: 120 VVEKFSVEAPKTKLLAQKLKDMAL-EDVLII--TGELDENLFLAARNLHKVDVRDATGID 176 VV + + + VL I T + +N+ LA + +++ G++ Sbjct: 203 VVNNLDIPTDDPGYINDLVDSRLWGPSVLFIDDTDTMPKNISLALNQIKHMNLMPVYGLN 262 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 S++ ++ +V+T AVK+++E L Sbjct: 263 VYSMLKYETLVLTVAAVKKIQERL 286 >UniRef50_C6HWF6 Ribosomal protein L4 n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWF6_9BACT Length = 210 Score = 209 bits (532), Expect = 5e-53, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 113/198 (57%), Gaps = 4/198 (2%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + S +++ FN +VH++ AG R GT + KTR EV+G GKKP+RQKGTG Sbjct: 11 KSSSTISIDSEVTQDSFNNGIVHEITTMELAGMRAGTSSTKTRGEVSGGGKKPYRQKGTG 70 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GS ++P WR G + F RP+++ K K AL+ L V ++++ ++ Sbjct: 71 RARQGSSRAPQWRGGAIIFGPRPRNYFYKQPSKKVLKALREALLVRVSENKVSIIPNLES 130 Query: 127 EAPKTKLLAQKLK----DMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 E KTK LK + +++LII+ ELDEN +L++RN+ + + +T + + ++ Sbjct: 131 ETLKTKKFVDLLKKYHTNPGYQNILIISEELDENTWLSSRNIPGLTILPSTAVTALYMVF 190 Query: 183 FDKVVMTADAVKQVEEML 200 D V++ D+ + ++++L Sbjct: 191 TDVVLVAEDSREWLQQLL 208 >UniRef50_C9RR33 Ribosomal protein L4/L1e n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RR33_FIBSS Length = 206 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 3/193 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 D ++ + + F ++ N+ ++ + A RQGT K++ EV+G G+KPW+QKGTG Sbjct: 12 DFKNDIQLP-ALFDQEVNKVCMYLHIKAILNNNRQGTAQTKSKGEVSGGGQKPWKQKGTG 70 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RARSG S +W G + D+ +KVNKK+ + A S L+ + ++ V E S Sbjct: 71 RARSGQNTSAVWVRGAKAHGPKSHDYFEKVNKKVKKIAFYSALANKASEGKVSVFEALSF 130 Query: 127 EAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 APKTK L L +E +VL I E D+NL+L++ N+ ++ ++ + Sbjct: 131 SAPKTKDLLSVLAKSGIEQRNVLFIVSEKDQNLYLSSNNIPWCRCARVADVNTYDVVRAN 190 Query: 185 KVVMTADAVKQVE 197 VV++ A+ ++E Sbjct: 191 NVVISQAALAELE 203 >UniRef50_C1Z9D6 LSU ribosomal protein L4P n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1Z9D6_PLALI Length = 209 Score = 208 bits (531), Expect = 7e-53, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 105/176 (59%), Gaps = 2/176 (1%) Query: 23 FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGG 82 N+ L+H VV Y A RQGT K+RAE+ GS +K ++QKGTGRAR G+ + P+ R GG Sbjct: 29 INKQLLHDAVVMYQANLRQGTFKSKSRAEIAGSKQKLFKQKGTGRARQGNKRQPVRRGGG 88 Query: 83 VTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMA 142 FA RP D S ++ +K + A + L + + + ++E ++EAPKTK++A L + Sbjct: 89 HAFAKRPTDFSYRLPRKALQLATRMALLGKFQDNEVTIIESLALEAPKTKVVASLLNKLG 148 Query: 143 LED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 LE LI D N++ +ARN+ KV V A G++ L+ ++V+T DA+ + Sbjct: 149 LESKGCLISIPSHDSNVWKSARNIPKVGVSPAAGLNAYQLLLRKQLVVTTDALDLL 204 >UniRef50_B4SKW4 50S ribosomal protein L4 n=13 Tax=Xanthomonadaceae RepID=RL4_STRM5 Length = 201 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 112/202 (55%), Positives = 144/202 (71%), Gaps = 2/202 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 MELV+ + + ++VS+ FGRDF+E LVHQVVVAY R GT+AQKTR+EV G+ KK Sbjct: 1 MELVITGSNNKVSVSDAVFGRDFSEDLVHQVVVAYRNAGRAGTKAQKTRSEVAGTTKKSK 60 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 +QKG AR G++ +PI+ GGVTFAA+P+ QKVN+K YR A+ +ILSEL RQ RL + Sbjct: 61 KQKGG-GARHGALTAPIFVGGGVTFAAKPRSFEQKVNRKQYRAAMCAILSELNRQGRLTI 119 Query: 121 VEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 VE F VE TK L KL + + + LI+T E E+L+L+ARNL V VRD G+DPVS Sbjct: 120 VESFDVEVTNTKGLIAKLAGLEVGKRPLIVTEEASEHLYLSARNLPYVQVRDVQGLDPVS 179 Query: 180 LIAFDKVVMTADAVKQVEEMLA 201 L+ D VV+TADAVK+VEE LA Sbjct: 180 LVGADTVVITADAVKKVEEWLA 201 >UniRef50_A6DPN5 50S ribosomal protein L4 n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPN5_9BACT Length = 215 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 118/202 (58%), Gaps = 10/202 (4%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 A L ++ + E VH+ VVA+ A R G+ KTR+E G G+KPWRQKGTG Sbjct: 13 ASGELEINSKWLEFEKGEQAVHESVVAFLASLRSGSANTKTRSEKRGGGRKPWRQKGTGN 72 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR+GS +SPIW GGV F +P+ +++ VNKK+ R A++ L+E ++ + LIVV+ F+ E Sbjct: 73 ARAGSTRSPIWTGGGVAFGPKPRSYAKNVNKKVRRLAVRRALAERIQAEELIVVDSFAFE 132 Query: 128 APKTKLLAQKLKDMALED--VLIITGELDENLF------LAARNLHKVDVRDATGIDPVS 179 P TK L+ + D V+I++ +L EN+ + N+ V A+ ++ Sbjct: 133 KPSTKTAIAFLESVNAADRPVIILSDDLTENIENLENTAKSFNNVSLV--MTASEVNAYD 190 Query: 180 LIAFDKVVMTADAVKQVEEMLA 201 +++ KV++T A++QV + ++ Sbjct: 191 ILSGKKVIITKAALEQVGQRIS 212 >UniRef50_Q8D211 50S ribosomal protein L4 n=2 Tax=Gammaproteobacteria RepID=RL4_WIGBR Length = 201 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 110/185 (59%), Positives = 146/185 (78%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 MEL+ D++ + +SE FG+ FNE+LVHQVV +Y RQGT AQK+R+EV GSGKKPW Sbjct: 1 MELLCIDSKEKVKISEKIFGQKFNESLVHQVVRSYRITKRQGTSAQKSRSEVIGSGKKPW 60 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTGRAR+GS+KSPIWRSGGVTFA + +D K+NKKMY+ ALKSI SEL RQ+R+++ Sbjct: 61 RQKGTGRARAGSVKSPIWRSGGVTFAKKTRDFKHKINKKMYKNALKSIFSELCRQNRILI 120 Query: 121 VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 V+ F V++ KTKLL +KL +M LE+VLII+ +D+NL L++RNL+KV V I+P++L Sbjct: 121 VKNFFVKSEKTKLLKKKLNEMNLENVLIISKTIDKNLVLSSRNLNKVHVCFPININPINL 180 Query: 181 IAFDK 185 I+F K Sbjct: 181 ISFKK 185 >UniRef50_C1E7J4 Predicted protein n=2 Tax=Micromonas RepID=C1E7J4_9CHLO Length = 276 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 3/197 (1%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 + T+ D + LVH+ VV AR+GT + T++EV G G+KP++QKGTG Sbjct: 73 SAGTATLDVKVAKPDVAKGLVHKYVVMVRQNARRGTASTLTKSEVRGGGRKPFKQKGTGN 132 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR+GS ++P+ GGV F +P+D S K+NKK R A+ + + +IVV+ + Sbjct: 133 ARAGSSRTPLKPGGGVVFGPKPKDWSIKMNKKERRLAMATAIQSAAAASSMIVVDSLAGA 192 Query: 128 APKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 APKTK +A LK + E IIT + E + L+ RN+ +V D ++ ++ D Sbjct: 193 APKTKAMATALKSWGVAEGEKAYIITKDAPEGVTLSTRNMARVVQTDIKHLNVYDVLNAD 252 Query: 185 KVVMTADAVKQVEEMLA 201 KVV+ A++ + + Sbjct: 253 KVVVEESALQYINDFYG 269 >UniRef50_UPI0000D54D0B 50S ribosomal protein L4 n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54D0B Length = 207 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M++ ++D+ ++ + F + N ++V Q V++ + RQGT + + R+ V G G Sbjct: 1 MKINVQDSSGKIVESIKLDSNIFNIEVNSSVVRQAVLSELSNLRQGTHSSRNRSAVRGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPW+QKG G AR+G+I+SP+W+ GG F P +++K+ KKM + A KS+L++ V+ Sbjct: 61 KKPWKQKGRGVARAGTIRSPLWKGGGAVFGPEPHVYNKKLPKKMSKLARKSVLTKKVQDK 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATG 174 L+V++ ++ + KT ++ + + + L++ ENL L++RN+ V + + Sbjct: 121 ELVVLDSINISSKKTADFISFMESINILNKKTLVLVDSYQENLILSSRNIRNVFIENVKT 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEMLA 201 + L+ + +++ + E+LA Sbjct: 181 VSVYDLLDSEIILIDKLGINTFSEVLA 207 >UniRef50_A4S817 Plastid ribosomal protein L4 large ribosomal subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S817_OSTLU Length = 251 Score = 205 bits (523), Expect = 5e-52, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 7/199 (3%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 SA T+ T + LVH+ VV AR+GT + T++EV G G+KP++QKGTG Sbjct: 48 KSSAATLELKTARAEVARGLVHKYVVMVRQNARRGTASTLTKSEVRGGGRKPFKQKGTGN 107 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--S 125 AR+GS ++P+ GGV+F +P+D S K+NKK R A+ + L +IVV+ + Sbjct: 108 ARAGSSRTPLKPGGGVSFGPKPRDWSIKMNKKERRLAMATALQSAASA--MIVVDDISGN 165 Query: 126 VEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 + AP T + L + E +IT + +EN+ +ARN+ +V D + ++ ++ Sbjct: 166 ISAPGTNAFNKSLMAWGVGASEKAYVITKDANENVAKSARNIERVVQTDVSHLNVYDILN 225 Query: 183 FDKVVMTADAVKQVEEMLA 201 DKV++ A A+ + Sbjct: 226 ADKVIVEASALAHISSFFG 244 >UniRef50_Q54RB5 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54RB5_DICDI Length = 258 Score = 205 bits (522), Expect = 8e-52, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 102/193 (52%), Gaps = 1/193 (0%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 + +S+ F L+H++V A ++QGT + + KKP RQKG+G Sbjct: 62 PIENIQLSKDVFSVPLRVDLLHRMVRYQRAKSQQGTHQALNMGRMERTNKKPTRQKGSGN 121 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR G+ S +R G TFA + H+ + +K+ + LK LS + Q++L+VV+ F++E Sbjct: 122 ARKGTNHSVHFRGGARTFAPTMRSHAHDLPRKVRKLCLKVALSTKLAQNKLVVVDGFNLE 181 Query: 128 APKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 + KTK L KL L++ E+ + L ++ N+ K+D G++ +++ D +V Sbjct: 182 SHKTKELLSKLPK-DWGRTLLVDSEISDFLNKSSLNVQKIDTLPQLGLNVYTILQNDTLV 240 Query: 188 MTADAVKQVEEML 200 +T +V+ ++ L Sbjct: 241 LTKSSVEALQARL 253 >UniRef50_D2VLH2 Ribosomal protein L4/L1e n=1 Tax=Naegleria gruberi RepID=D2VLH2_NAEGR Length = 332 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 13/203 (6%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + F + +++ +V A RQGT K R E +K QKG G AR Sbjct: 122 INLHPYFFNCTPRKDILYLMVKWQLAKRRQGTHKTKYRLETAYCKQKQTPQKGRGAARHS 181 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 +P +R GG A RP+ + +NKK+ R AL+ L+ +Q +LI+V+ FS++ KT Sbjct: 182 DRGAPQYRGGGHAMALRPRSYEYNLNKKIRRLALRMALTTKYQQGKLIIVDDFSIDTFKT 241 Query: 132 KLLAQKL------------KDMALEDVLIITGE-LDENLFLAARNLHKVDVRDATGIDPV 178 K +A + K++ VL+I GE ++ N NLH D G++ Sbjct: 242 KYVAGLISNTVFPDSETHEKEIKDRGVLLIDGEQVNANFERGVFNLHYADYLSIDGLNVY 301 Query: 179 SLIAFDKVVMTADAVKQVEEMLA 201 ++ +KVV++ ++ + + A Sbjct: 302 DMLRREKVVISKSGLETLTKKYA 324 >UniRef50_B2S2D7 50S ribosomal protein L4 n=25 Tax=Spirochaetaceae RepID=RL4_TREPS Length = 216 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 101/194 (52%), Gaps = 1/194 (0%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 A ++ + E+ FG N +++ + + + R GT K R+EV GS KP++QKGTGR Sbjct: 12 ALRSVELDESVFGLSVNRGVIYYAINSELSNKRLGTACTKGRSEVHGSNTKPYKQKGTGR 71 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR G KSP+ GG F +P+D + KK+ R A+KS+LS + D L V+E F+VE Sbjct: 72 ARRGDKKSPLLVGGGTIFGPKPRDFHYALPKKVKRLAMKSLLSLKAQGDALTVIEDFTVE 131 Query: 128 APKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 + KT+ L Q L+ A E + I D L A RN+ + + L KV Sbjct: 132 SGKTRDLIQVLRHFAQRERTVFILQNDDALLKRAGRNIPTLSFLSYNRLRAHDLFYGRKV 191 Query: 187 VMTADAVKQVEEML 200 ++ AV ++ + Sbjct: 192 LVLETAVHKIADFY 205 >UniRef50_Q2GED8 50S ribosomal protein L4 n=2 Tax=Neorickettsia RepID=RL4_NEOSM Length = 214 Score = 203 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 4/195 (2%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 ++ V F L+ V+ A R GT K +EV+G+ +KP+RQKGTGRAR Sbjct: 18 GSVAVDRALIEAPFRPDLLSLVINWQLAKRRAGTHKTKGISEVSGTTRKPYRQKGTGRAR 77 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 GS+++P +R GG+ F + H VNKK+ AL+S LS + RL V+E + Sbjct: 78 QGSLRAPQFRKGGIVFGPVVRQHGFSVNKKVRSLALRSALSMRFAEGRLFVLESSRLGES 137 Query: 130 KTKLLAQKLKDMA----LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 K L + A + LI+T E +E L AA NLH V V + + ++ D Sbjct: 138 KAATLLKWFASNAELSVGKKFLIVTEEKNEGLLRAASNLHWVKVLWGSSANVYDVVLHDF 197 Query: 186 VVMTADAVKQVEEML 200 V++ +V + + L Sbjct: 198 VLLEKASVDVLVKRL 212 >UniRef50_P49546 50S ribosomal protein L4, chloroplastic n=3 Tax=Bacillariophyta RepID=RK4_ODOSI Length = 215 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 113/180 (62%), Gaps = 7/180 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H+ ++ + + RQGT + KTR+EV G G+KPWRQKGTGRAR+GS +SP+W+ GGV F Sbjct: 37 LIHKDILRHQSSQRQGTISTKTRSEVRGGGRKPWRQKGTGRARAGSSRSPLWKGGGVIFG 96 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVEAPKTKLLAQKLKDMAL- 143 +P+ K+NKK + AL+++L ++ + +++ +++ PKTK K+ + Sbjct: 97 PKPRKIILKLNKKERKLALQTLLYNK--RNNISIIDNLETNLDLPKTKTFYSLCKNCEIN 154 Query: 144 --EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 + +LII GE L LA RN+ V++ A+ ++ SL+ +++MT AVK ++E+ Sbjct: 155 LDQKILIIVGEKTIPLKLATRNIKNVELILASNLNTFSLLKAKQILMTPLAVKDIKEIYC 214 >UniRef50_D1J751 Chloroplast 50S ribosomal protein L4 n=2 Tax=Phaeophyceae RepID=D1J751_ECTSI Length = 232 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 59/185 (31%), Positives = 113/185 (61%), Gaps = 6/185 (3%) Query: 20 GRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWR 79 G++ + ++++ +A RQGT TRAEV G G+KPWRQKGTGRAR+GS +SP+W+ Sbjct: 48 GQETDNYILYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWRQKGTGRARAGSNRSPLWK 107 Query: 80 SGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE-KFSVEAPKTKLLAQKL 138 GGV+F +P+ + K+N+K ++ A++ ++ ++++ + +++ FS KT + Sbjct: 108 GGGVSFGPKPKTYINKLNRKEWQLAVRGLI--ILKEPSITIIDHNFSSIDNKTNIFINLF 165 Query: 139 KDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQ 195 K + +++ I ++ENLF RN+ V + A ++ ++L+ D + ++ D++K Sbjct: 166 KGCDISFSKNITFIVPAIEENLFKVTRNIKTVTIMRADTLNLITLLESDHLFISKDSLKI 225 Query: 196 VEEML 200 +EE+ Sbjct: 226 IEEIY 230 >UniRef50_Q1AU30 50S ribosomal protein L4 n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RL4_RUBXD Length = 211 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 98/191 (51%), Gaps = 3/191 (1%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 +S + + F + + ++H+ VVA R+ T + + R+EV GSG K +RQKGTGRA Sbjct: 14 RSEMELKGPRFETEPKQHVIHRAVVAELEARRRWTASTRERSEVAGSGAKLYRQKGTGRA 73 Query: 69 RSGSIKSPIWRSGGVTFAARPQ--DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 R+G IKSP+ GG +P+ + +K+N+K R A LS + RL V++ Sbjct: 74 RAGDIKSPLRHGGGTWGGPKPKGPRYGKKINRKEARAAFDGALSAKAAEGRLYVLDALDF 133 Query: 127 EAPKTKLLAQKLKDMALED-VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 E P TK + L M +E VL++ + L+ RNL +V V G L+ + Sbjct: 134 ERPSTKRAKELLGQMGVEGPVLLVLDGEEREAALSFRNLPEVTVVGPRGYGVYELLRARE 193 Query: 186 VVMTADAVKQV 196 VV + A ++ Sbjct: 194 VVFSRAAYGRL 204 >UniRef50_Q4PHH8 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PHH8_USTMA Length = 438 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 103/250 (41%), Gaps = 56/250 (22%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 +++ + +S F ++H VV Y R GT + K R++V GS +K QKG+G+ Sbjct: 143 SKAYVPLSAHVFDAPARRDVIHSAVVYYLDAQRSGTASTKGRSDVRGSMRKLRPQKGSGQ 202 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR G++ +PI R G V RP+DHS K+ +++ AL+S LS RQ L+VVE + Sbjct: 203 ARLGTMSNPILRGGAVAHGPRPRDHSTKLPRRVRELALRSALSSKWRQGNLLVVENLNWT 262 Query: 128 AP--KTKLLAQKLKDMALEDVLIITGELDE------------------------------ 155 AP T LA+ L D L +T D Sbjct: 263 APPSSTGPLARLLGSKGWSDALFLTAPRDPQPSMRSLIKDARPSSSDPIYDEHQKLSHQQ 322 Query: 156 ---NLFLAARNLHKVDVRDATG---------------------IDPVSLIAFDKVVMTAD 191 N LA+ NL + ++ + + ++ KV+ Sbjct: 323 AIRNFVLASNNLPRAELIELDSLTEEYRDNIAKTSDDKKKPGELHAYEVLRRHKVICDLG 382 Query: 192 AVKQVEEMLA 201 AV+ +EE L Sbjct: 383 AVEWLEEKLG 392 >UniRef50_B5Y986 Ribosomal protein L4/L1 family n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y986_COPPD Length = 208 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 7/207 (3%) Query: 1 MELVLKDAQSAL----TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L + D A V+E L+H VV +G R GT + K + EV GS Sbjct: 1 MQLPVFDVNGAEVAYEDVNENLVATPVRGRLLHLNVVRVLSGKRHGTASTKKQGEVAGST 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 +KPW QK TGRAR G ++SPIWR G V F +P+D ++ VNKK + A+ S ++ Sbjct: 61 RKPWPQKHTGRARHGYMRSPIWRKGAVAFGPKPRDWTKDVNKKQVKLAMASCFGYRLKNG 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKL--KDMALEDVLIITGELDENLFLAARNLHKVDVRDATG 174 L++++ S KT+ L K + + V +++ ++ + A +NL V Sbjct: 121 ELLLIDANSFNG-KTREFKAFLRSKQLDEKRVTVVSLAGEQGVRRACQNLENVYYVPVEK 179 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEMLA 201 ++ L+ D V+MT A + +E+ A Sbjct: 180 VNAYDLLKGDAVIMTQSAWVRAQEVWA 206 >UniRef50_Q7VQE7 50S ribosomal protein L4 n=7 Tax=Gammaproteobacteria RepID=RL4_BLOFL Length = 212 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 103/193 (53%), Positives = 145/193 (75%), Gaps = 2/193 (1%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 ++VS+ FG FN AL+HQ+V +Y RQG+++QK+R++V+GS KKPWRQKGTGRARS Sbjct: 20 NVSVSDKVFGYPFNPALIHQIVSSYLINCRQGSKSQKSRSDVSGSNKKPWRQKGTGRARS 79 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 GS+KSPIWRSGGVTFA++P+ + QK+NKKMY+GA+KSILS+LV +RL ++E +E PK Sbjct: 80 GSVKSPIWRSGGVTFASKPKKYDQKINKKMYKGAMKSILSKLVCDNRLFLIEDLFLEKPK 139 Query: 131 TKLLAQKLKDMALE-DVLIITGEL-DENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 T LL +KLK++ + VLI+T + D+NL LA+ NLH V + + IDPVSLI F+ ++ Sbjct: 140 TNLLLKKLKNITSDRSVLIVTDNVIDKNLILASSNLHTVKIYNLNSIDPVSLINFNITLL 199 Query: 189 TADAVKQVEEMLA 201 V+ +E L+ Sbjct: 200 FRTIVESLELRLS 212 >UniRef50_B0VI30 50S ribosomal protein L4 n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI30_9BACT Length = 211 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 4/198 (2%) Query: 7 DAQSALTVSETTFGRDFNEA--LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 + + + E F D N L+++VV + A RQGT +K R+ GS +K +RQKG Sbjct: 12 ELIGEVDLPEGIFEVDVNAPKILLNEVVTMFLANQRQGTVQKKNRSMTAGSTRKLFRQKG 71 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TG AR G+ +SPI GG FA P+D +K+ + R ALK L++ R+ R+++V+ Sbjct: 72 TGNARVGTRRSPIRVHGGKAFAIYPKDWYRKIPRTKKRLALKVALTDRAREGRIMIVDNL 131 Query: 125 SVEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 S E P TKL + L + E LI+T + NL +V A ++ ++ Sbjct: 132 SFEKPNTKLAVELLNKIIPEKGYKLIVTDGHHIPTVKSFANLPEVMTDRADSLNAYEVLK 191 Query: 183 FDKVVMTADAVKQVEEML 200 ++MT +A+K+VEE+ Sbjct: 192 SSYIIMTDEALKKVEEVF 209 >UniRef50_A8QA96 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QA96_MALGO Length = 395 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 99/248 (39%), Gaps = 52/248 (20%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K A + + +S F ++ +H VV Y R GT + K+R++V SGKK QKGT Sbjct: 85 KRAIAYVPMSSHVFNTAPHQHAMHMAVVYYLDALRSGTASTKSRSDVAYSGKKLRPQKGT 144 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR +P+ R GGV +P+D + +K+ AL+S LS R+ RL VV Sbjct: 145 GRARLSDAGNPMLRGGGVAHGPKPRDFKTDLPRKVRELALRSALSARFREGRLHVVPSLD 204 Query: 126 VEAP--KTKLLAQKLKDMALEDVLIITGELDE---------------------------- 155 AP T LA+ L + L +T D Sbjct: 205 WYAPPMSTNKLARLLSAKQWTNTLFLTAPRDPVSPVANERGSMRPSSVNLMYTDQQLTRH 264 Query: 156 -----NLFLAARNLHKVDVRD-----------------ATGIDPVSLIAFDKVVMTADAV 193 + LA RNL VD+ + ++ F ++V+ A+ Sbjct: 265 AQYIRHFALAQRNLPDVDLVRLHELPPHPRPRLEHAKQPGELHAYQVLEFQRIVLDMGAL 324 Query: 194 KQVEEMLA 201 + +EE L Sbjct: 325 EWLEEKLG 332 >UniRef50_Q7UN19 50S ribosomal protein L4 n=1 Tax=Rhodopirellula baltica RepID=RL4_RHOBA Length = 222 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 113/202 (55%), Gaps = 6/202 (2%) Query: 3 LVLKDAQSAL----TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKK 58 L + DA + ++ L+H VVV Y A RQG+ +TR +V+G+ KK Sbjct: 4 LPILDASGKEVGQYEIDTEQIANRVSKQLLHDVVVMYQANKRQGSHNTRTRGQVSGTNKK 63 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRL 118 +RQKGTG AR+GS ++ + R GGV +P+D+S ++ KK + A + + + + Sbjct: 64 MYRQKGTGNARAGSKRTNVRRGGGVARTVKPRDYSYRLPKKAIKIATRMAIRSRIDDGEI 123 Query: 119 IVVEKFSVEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGID 176 +V+ + ++APKT +AQ LK++ L + LI T D+ ++ + RN+ V V ++ Sbjct: 124 VVINELKLDAPKTSQIAQILKNLGLANTTTLIATAGDDQIIYKSGRNISGVTVEPVRQLN 183 Query: 177 PVSLIAFDKVVMTADAVKQVEE 198 ++L+ +V+ T +A+ +V++ Sbjct: 184 ALTLLTPKRVLFTQEALDRVKD 205 >UniRef50_Q0FQD6 50S ribosomal protein L4 (Fragment) n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FQD6_9RHOB Length = 177 Score = 198 bits (505), Expect = 8e-50, Method: Composition-based stats. Identities = 60/175 (34%), Positives = 100/175 (57%), Gaps = 4/175 (2%) Query: 1 MELVLKD--AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKK 58 ++++ D A + +++ F + ++H+VV A+ GT KTR+EV+ S KK Sbjct: 3 LDVIKLDGGAAGEVELTDEIFDLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYSTKK 62 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRL 118 +RQKGTG AR GS K+PI+R GG+ P+ H+ + KK+ + LK LS + L Sbjct: 63 IYRQKGTGGARHGSRKAPIFRKGGIYKGPTPRSHAHDLPKKVRQLGLKLALSAKAKAGSL 122 Query: 119 IVVEKFSVEAPKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRDA 172 +++E + KTK LA ++K++ + L+I G E++EN AA N+ +DV + Sbjct: 123 VIIENADADG-KTKTLASQVKNLGWKRALVIDGAEVNENFARAAANIDGLDVLPS 176 >UniRef50_B1ZNE7 Ribosomal protein L4/L1e n=3 Tax=Verrucomicrobia RepID=B1ZNE7_OPITP Length = 210 Score = 198 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 1/183 (0%) Query: 18 TFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPI 77 TF D V +V+VA A RQGT + KTR EV G GKKPWRQKGTGRAR+GSI+SP+ Sbjct: 22 TFEGDKGLQAVKEVIVAINANNRQGTHSTKTRGEVRGGGKKPWRQKGTGRARAGSIRSPL 81 Query: 78 WRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQK 137 W GGV F +P+D+S+K+N K+ + A L + + V+E F +A KTK Q Sbjct: 82 WGGGGVVFGPKPRDYSKKINAKVKQLAFSRALFDRASAGEIAVIEAFDSKATKTKAFNQI 141 Query: 138 LKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 L +A + VL++ A+RNL +V +++A ++ + L + K+++++ A++ + Sbjct: 142 LGRIAPKGKVLLVDAPFAAEAARASRNLERVTLQEAAKLNTLDLAQYQKIIVSSKALEAI 201 Query: 197 EEM 199 Sbjct: 202 IAR 204 >UniRef50_Q04PT9 50S ribosomal protein L4 n=23 Tax=Leptospira RepID=RL4_LEPBJ Length = 211 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 5/192 (2%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 S + + F + A +++ + A A R G A KTR+EV G GKKPW QKGTG A Sbjct: 13 ISEIELPSALFESKLSVASIYEAIKAENANLRSGNHATKTRSEVRGGGKKPWSQKGTGHA 72 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R GS ++P W GG + +D+S KV+ K+ A+ SIL++ + + V+E + Sbjct: 73 RQGSTRAPHWVGGGTVHGPQKRDYSYKVSSKLKHKAVLSILNKKAQASAVKVIEDLDPKE 132 Query: 129 PKTKLLAQKLKDMALEDV----LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 TK K+M L + ++ GE D + + RN+ V ++ I ++ Sbjct: 133 YSTKSFDSIFKNMNLRNTGVIGFLVQGESD-FVKKSVRNIPTVKYINSKRISCRDILYNR 191 Query: 185 KVVMTADAVKQV 196 +V+T A+ ++ Sbjct: 192 NLVITEAALNEM 203 >UniRef50_O17005 Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=O17005_CAEEL Length = 299 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 7/206 (3%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ + + + + F ++H+ + + T+AE+ G G+KPW Sbjct: 56 LDTIEDEKLGLVDLHPDIFRTSPRIDILHRNLTWQSVYRNVQMTKMLTKAEMPGGGRKPW 115 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QK TGRA GSI+SP + GG R P+ + + L L+ QD L Sbjct: 116 PQKKTGRAHVGSIRSPQFIRGGFANGVRGPRTWFYMLPDAVRIQGLCVALTLKHTQDDLH 175 Query: 120 VVE---KFSVEAPKTKLLAQKLKDMALEDVLIIT--GELDENLFLAARNLHKVDVRDATG 174 +V+ PK + + ++ VL + E+ L A + L ++V G Sbjct: 176 IVDKIQNLQNGDPKYWIDLCEARNYGY-SVLFVDDCDEISGGLAEAQQALPWLNVMPVYG 234 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEML 200 ++ SL+ +D +V++ A+++VEE L Sbjct: 235 LNCFSLMKYDTIVLSRSALERVEERL 260 >UniRef50_Q7XYP3 Ribosomal protein rpL4 (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XYP3_BIGNA Length = 335 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 10/209 (4%) Query: 1 MELVLKDAQ--SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKK 58 +E+ D Q + +S + + LVH+ ++ R GT + KT++EV G GKK Sbjct: 114 LEVKNFDGQVVGSDDMSLKVARPETAKGLVHRYLMYARNSMRAGTASTKTKSEVRGGGKK 173 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRL 118 P++QK TG AR GS ++P+ GG+ F +P+D S +N+K R A+ + L + Sbjct: 174 PYQQKKTGNARQGSRRTPLKPGGGIIFGPKPRDWSVDMNQKERRIAMATALQS--ASSDV 231 Query: 119 IVVEKFS--VEAPKTKLLAQKLKDMAL----EDVLIITGELDENLFLAARNLHKVDVRDA 172 I+VE E+PKTK +A L + E VL++ N L+ARN+ K+ + Sbjct: 232 ILVEDLDGKFESPKTKNMADFLDRVGAKPSEEKVLLVVEGQKRNALLSARNIDKLKINKP 291 Query: 173 TGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 T + + ++ DK++M A + ++ + Sbjct: 292 TSLRIIDVLGADKIIMEKKAFETMKNIFG 320 >UniRef50_Q84U22 Plastid ribosomal protein L4 n=1 Tax=Chlamydomonas reinhardtii RepID=Q84U22_CHLRE Length = 243 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 8/188 (4%) Query: 20 GRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWR 79 D + LVH+ +V ARQGT + TR+EV G GKKP+ QKGTG AR GS SP++ Sbjct: 51 AEDSAKGLVHRYLVMVQQNARQGTASTLTRSEVRGGGKKPYAQKGTGNARRGSSVSPLFP 110 Query: 80 SGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVEAPKTKLLAQK 137 GGVTF +P+D S +NKK R AL + L +IVVE ++ KTK + Sbjct: 111 GGGVTFGPKPKDWSISMNKKERRLALATALQSATA--DMIVVESLAGKLQDTKTKSMVAL 168 Query: 138 LKDMAL----EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAV 193 L+ + VL+IT E ++ LA RN+ K+ + A+ I ++ D +++ +A+ Sbjct: 169 LEKLGANAMERKVLLITKEERPDVTLAGRNIAKLTMNTASAISVFDVLNADHIIIEDEAL 228 Query: 194 KQVEEMLA 201 V+ Sbjct: 229 AHVQSFYG 236 >UniRef50_B8BX09 RM4, ribosomal protein 4 (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8BX09_THAPS Length = 199 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 7/198 (3%) Query: 10 SALTVSETTFGRDF-NEALVHQVVVAYAAGAR---QGTRAQKTRAEVTGSGKKPWRQKGT 65 ++ +S TFG D ++H+ VV R KT EV+GSG+K QKG Sbjct: 2 GSIHLSAHTFGCDPIRVDILHRCVVYQRNKRRGKRNAGARTKTIHEVSGSGRKVRNQKGG 61 Query: 66 GRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 G AR+G + WR G + QD++ K+NKK+ + ++ LS+ + + LIV+ Sbjct: 62 GVARAGHSRPAHWRGGAKAHGPKGSVQDYTTKLNKKVRKMGVRHALSQKLLEGNLIVMGD 121 Query: 124 FSVEAPKTKLLAQKLKDMALEDVL-IITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 + ++ KTK L + L + + G L+ NL +A+ NL KV V + G + L+ Sbjct: 122 LNAKSHKTKELEEALGRFGIAGKKGTVYGGLNVNLKVASGNLFKVKVMNQLGTNVYDLLK 181 Query: 183 FDKVVMTADAVKQVEEML 200 +K+V++ AVK +EE L Sbjct: 182 HEKLVLSLSAVKALEERL 199 >UniRef50_B2UMT9 Ribosomal protein L4/L1e n=2 Tax=Verrucomicrobiaceae RepID=B2UMT9_AKKM8 Length = 202 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 113/202 (55%), Gaps = 1/202 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 M ++A + G D VH ++VAY A R G+ KTRAEV+G+ KK + Sbjct: 1 MSANTFTLEAAAAANIQVVGSDKGSQAVHDLIVAYQANRRTGSANSKTRAEVSGNNKKIF 60 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTG AR G ++PI+ GGV F RP D+S+KVNK R AL+ +L +L+ ++ Sbjct: 61 RQKGTGNARHGDKRAPIFVGGGVVFGPRPCDYSKKVNKSTRRLALRRVLGDLIAASKVST 120 Query: 121 VEKFSVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 V +FSV KTK + +KD+ + VLI+ DE + AARN+ +V + A ++ Sbjct: 121 VSEFSVADGKTKSFIKAVKDLTDAKKVLIVAASFDETTYRAARNVQEVLLMTAAEVNIEQ 180 Query: 180 LIAFDKVVMTADAVKQVEEMLA 201 L+ D V++ +A++ + A Sbjct: 181 LMNADAVILVDNALETLASRTA 202 >UniRef50_D0J9J1 50S ribosomal subunit protein L4 n=2 Tax=Blattabacterium RepID=D0J9J1_BLASP Length = 210 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 115/207 (55%), Gaps = 7/207 (3%) Query: 1 MELVLKDAQSALTVSETTFGRDF-----NEALVHQVVVAYAAGARQGTRAQKTRAEVTGS 55 MEL + D + T + F F + ++ V Y + RQGT K R E++GS Sbjct: 1 MELEILDIKGNSTNRKVLFNEKFFSKKSYDHPIYLEVKRYLSAQRQGTHKSKERGEISGS 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQ 115 +K RQKGTG +R G IK+P++R GG F P+ + K+NK A K+I+ ++ Sbjct: 61 RRKLHRQKGTGGSRKGDIKNPLFRGGGRVFGPTPRRYFMKINKLTKNLAKKNIIEHKLKT 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDAT 173 ++ ++E F ++ PKTKL+ LK + L E L+I + D NL L+ARNL + +A Sbjct: 121 KKVKIIEDFQLKKPKTKLVLNILKSLQLMNEKSLMIVEKADRNLHLSARNLKNFQLLNAE 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEML 200 ++ SL+ V+++ ++VK++E +L Sbjct: 181 ELNSYSLLNSSYVILSENSVKRIERIL 207 >UniRef50_B7P338 Ribosomal protein L4, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7P338_IXOSC Length = 295 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 13/204 (6%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ V + + + F +H + R +TRAE G G+KPW Sbjct: 79 LDTVESEKLGLVPLHPKIFAGFPRIDTLHWNIHWQKNYQRVDWATAQTRAERRGGGRKPW 138 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKGTGRAR GSI++P W+ GGV+ R P+ + + L + LS Q Sbjct: 139 PQKGTGRARHGSIRAPQWKGGGVSMGPRGPRTYFYMLPFFRRVEGLITALSVKFAQ---- 194 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALE---DVLIITGELDENLFLAARNLHKVDVRDATGID 176 E T L + + T + +N+ +A + +++ G++ Sbjct: 195 -----VTEMLCTFLCTSRATSHSSRFGWHCFRSTDYVPKNIAVACDQIKHMNIMPVYGLN 249 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 S++ +D +V+T A +++E L Sbjct: 250 VHSMLKYDTLVLTLSAAEEIEAKL 273 >UniRef50_O50061 50S ribosomal protein L4, chloroplastic n=23 Tax=cellular organisms RepID=RK4_ARATH Length = 282 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 6/201 (2%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + D A+VH+ +V R+GT + TR EV G G KP+ QK TG Sbjct: 62 EKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKTG 121 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRG-ALKSILSELVRQDRLIVVEKF- 124 AR GS ++P+ GGV F RP+D S K+N+K + ++ S + IVVE+F Sbjct: 122 HARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEFG 181 Query: 125 -SVEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 E PKTK ++ L E + + ++DEN+ ++RN+ + + ++ + Sbjct: 182 EKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDI 241 Query: 181 IAFDKVVMTADAVKQVEEMLA 201 + DK+V+T AV+ + Sbjct: 242 LNADKLVLTPAAVEFLNARYG 262 >UniRef50_C1FJ75 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1FJ75_9CHLO Length = 190 Score = 192 bits (489), Expect = 5e-48, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 5/192 (2%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 +T+ F + H+VVV + R TR+EV+G+ +K QKG GRAR Sbjct: 2 TVTLPGRHFDVPLRVDIAHRVVVWQRSKRRGNYAKTLTRSEVSGTTRKARAQKGAGRARV 61 Query: 71 GSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE-A 128 G++++P R GGV ++ + K+ +++ R L+ LS + R++V++ Sbjct: 62 GTLRAPQMRGGGVAHGPSGMRNWNTKLQRRVRRAGLQVALSAKAAEGRIVVLDSLHRGVE 121 Query: 129 PKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 PKT+ L L + L N A+ NL V V D G++ ++ + + Sbjct: 122 PKTQWLDGALDTLLGAQKL---PTTHSNAKRASLNLPHVQVMDQFGLNVYDVLRHRSLAI 178 Query: 189 TADAVKQVEEML 200 T DA+ + L Sbjct: 179 TRDALDALVARL 190 >UniRef50_B8LSS3 50S ribosomal protein L4 n=6 Tax=Eurotiomycetidae RepID=B8LSS3_TALSN Length = 299 Score = 192 bits (488), Expect = 7e-48, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 6/182 (3%) Query: 21 RDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRS 80 L+H+ VV RQGT + K R +V GSG+K QKGTG AR G KSPI R Sbjct: 94 VPLRRDLLHRAVVYEGDKTRQGTASTKWRDDVHGSGRKLAPQKGTGNARVGDKKSPIRRG 153 Query: 81 GGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKD 140 GGV P+D S + +K+Y A + LS + +L+VV+ + ++ + Sbjct: 154 GGVAHGPHPRDFSTDLPRKVYDKAWRIALSYRYTRGQLLVVDNIQTPDNSSPWFWKRFFE 213 Query: 141 MALE-----DVLIITGELDENLFLAARNLH-KVDVRDATGIDPVSLIAFDKVVMTADAVK 194 + L + +DE+LF A + D +D ++ K+++ A+ Sbjct: 214 VNLWGKNHGGCTFVKDRMDEDLFGAISEFKQHARILDRPDLDVKDILKNGKMIIEQKALN 273 Query: 195 QV 196 ++ Sbjct: 274 KI 275 >UniRef50_Q8IB54 Mitochondrial ribosomal protein L4, putative n=10 Tax=Aconoidasida RepID=Q8IB54_PLAF7 Length = 568 Score = 191 bits (487), Expect = 8e-48, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 7/198 (3%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYA-AGARQGTRAQKTRAEVTGSGKKPWRQKG 64 D ++V FG ++H+ Y A A R Q + E GS KK QK Sbjct: 186 DDNIKYISVPNDIFGLPIRSDILHKCYYFYRTALAGYTERMQLYKWEWPGSTKKYRSQKK 245 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 +G+AR K+ G RP D +N+K +K +LS QD++ VV+ F Sbjct: 246 SGKARMNWRKTCGRYLGVKNHPIRPFDQKTNINRKFLWKGMKILLSAKFAQDQIKVVDNF 305 Query: 125 SVEAPKTKLLAQKLKDM---ALEDVLIITG---ELDENLFLAARNLHKVDVRDATGIDPV 178 +++ KTK + L+++ L++ ++++N A N+ V + G++ Sbjct: 306 LIKSHKTKYTVKYLRNILGKNCNSALLVHEGKTDVNDNFLWACANIASVKRENVEGVNIY 365 Query: 179 SLIAFDKVVMTADAVKQV 196 +L+ + VV T A+K + Sbjct: 366 NLLKYRYVVFTYKALKNI 383 >UniRef50_UPI0001509D48 ribosomal protein L4/L1 family protein n=1 Tax=Tetrahymena thermophila RepID=UPI0001509D48 Length = 358 Score = 191 bits (487), Expect = 9e-48, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 2/193 (1%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 + + F +VH V+ T KT+ V+GSGKKP+ QKGTG+AR Sbjct: 89 KTVDLDHDIFNVPLRRDIVHSYVLWRQNRDEIKTHITKTKGTVSGSGKKPYAQKGTGKAR 148 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 G+ ++P + GG A+P+ +NKK+ ALK +LS + + +L ++E V+ P Sbjct: 149 MGNKRAPGRKKGGKAHGAKPRILRYPLNKKIRLQALKVVLSAKLAEGKLRIIETEQVDEP 208 Query: 130 KTKLLAQKLKDMALED-VLIITG-ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 KT+ +A+ L+ M +LI+ ++D N LA +N+ K+ + + ++ D+V Sbjct: 209 KTRAIAKMLEKMDKRSRILIVHPYQIDTNFELAHQNIQKLQSCYPNELSVLKVLTNDRVF 268 Query: 188 MTADAVKQVEEML 200 +T +A++Q+ + L Sbjct: 269 ITLEALRQLTQEL 281 >UniRef50_B6KDX9 50S ribosomal protein L4, putative n=3 Tax=Toxoplasma gondii RepID=B6KDX9_TOXGO Length = 625 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 7/194 (3%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYA-AGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + + FG ++++ Y A A R Q + E GS +K Q+ +GRA Sbjct: 211 GCVVLPNDIFGLPLRPDILYRCYWFYRRAIAGWTERMQLFKWEWPGSKRKLRTQQRSGRA 270 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R G K+P G RP D K+NK++ LK +LS Q ++ VV+ F++++ Sbjct: 271 RIGWRKAPGKYVGVKAHPLRPHDQRIKINKRLLWQGLKIMLSAKFAQGQITVVDHFNLQS 330 Query: 129 PKTKLLAQKLKDMALEDV---LIITG---ELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 KTK + L+ + L++ ++++N A ++ V + GI+ +L+ Sbjct: 331 HKTKHCVRHLRRLLGRKCPSALLVHEGTTDVNDNFRYATAHILAVRRENVEGINVYNLLK 390 Query: 183 FDKVVMTADAVKQV 196 + ++V+T A+ ++ Sbjct: 391 YRQLVITEKALLKL 404 >UniRef50_Q4UI83 Putative uncharacterized protein n=1 Tax=Theileria annulata RepID=Q4UI83_THEAN Length = 464 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 17/209 (8%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYA-AGARQGTRAQKTRAEVTGSGKKPWRQK 63 +K+A L V FG ++H+ Y A A Q + E GS KK +Q+ Sbjct: 103 VKEAIRYLRVPNDIFGLPIRPDILHRCYQFYRRAKAGYSEDMQLYKWEWPGSTKKWRKQQ 162 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKK------MYRGA----LKSILSELV 113 +G+AR G KSP G RP+D+ K+ ++ + A LK +LS Sbjct: 163 KSGKARIGWKKSPGKYVGVFAHPLRPKDNRTKIQRRSKLVFLIRFLALYTGLKIMLSAKF 222 Query: 114 RQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDV---LII---TGELDENLFLAARNLHKV 167 Q ++ VV+ F + + KTK Q L+ + + L++ + +EN + N+ V Sbjct: 223 AQSQIQVVDSFLMASHKTKYAVQNLRRILGDRCNSALLVFEGLSDSNENFRWSTANIPSV 282 Query: 168 DVRDATGIDPVSLIAFDKVVMTADAVKQV 196 G++ +L+ + ++V+T A++++ Sbjct: 283 RRETVEGVNVYNLLKYRQLVITQSALRKL 311 >UniRef50_C4XG14 Putative uncharacterized protein n=2 Tax=Mycoplasma RepID=C4XG14_MYCFE Length = 378 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 105/192 (54%), Gaps = 8/192 (4%) Query: 13 TVSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + F E + ++A A RQGT K R+EV+G GKKPWRQKGTGRAR+G Sbjct: 188 ALPKELFASPKIYEQAIFDTIMADRASRRQGTHDVKNRSEVSGGGKKPWRQKGTGRARAG 247 Query: 72 SIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 S +SPIW GG F P +++S KVNKK+ R A S L+ L+ + +V++ F + Sbjct: 248 STRSPIWVGGGRAFGPTPERNYSLKVNKKVRRAAFLSALT-LLSNKKSVVIDDFKMSKIS 306 Query: 131 TKLLAQKLKDMALED---VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 TK KLK + +E+ +L++T DE ++ + NL V + +L+ D +V Sbjct: 307 TKDAVNKLKSLKIENLKHILVVT--TDETVYKSTANLQNVLCVKPNSVSVENLVWADVLV 364 Query: 188 MTADAVKQVEEM 199 ++ + +K E Sbjct: 365 LSNEGLKNFEGR 376 >UniRef50_Q6B8V4 50S ribosomal protein L4, chloroplastic n=1 Tax=Gracilaria tenuistipitata var. liui RepID=RK4_GRATL Length = 217 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 106/182 (58%), Gaps = 7/182 (3%) Query: 24 NEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGV 83 ++H+ ++ + R +TR EV+G G+KPW+QKGTGRAR+GS +SP+WR GGV Sbjct: 36 KIYILHRALIHQLSNHRNRNAHTQTRGEVSGGGRKPWKQKGTGRARAGSNRSPLWRGGGV 95 Query: 84 TFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVEAPKTKLLAQKLKDM 141 F R + + K+NKK + AL+ +++ + IV E F + P TK+L LK Sbjct: 96 IFGPRHKKYVNKINKKEKQLALRILINNKFKNT--IVTENFISKISTPNTKILVNNLKKY 153 Query: 142 ALE---DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 L+ ++LII E +L+L+ RNL V++ A ++ VSL+ + +++ DA+ + + Sbjct: 154 NLDTNNNILIIVNEKSNDLYLSTRNLKNVELLAANHLNIVSLLKANHIIINKDALDIINK 213 Query: 199 ML 200 M Sbjct: 214 MY 215 >UniRef50_Q85FW2 50S ribosomal protein L4, chloroplastic n=1 Tax=Cyanidioschyzon merolae RepID=RK4_CYAME Length = 200 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 2/176 (1%) Query: 25 EALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVT 84 + L+H+ + + RQ KTRAE+ G G+KPW+QKGTGRAR+GS +SP+WR GGV Sbjct: 21 KHLLHRALRTHMLSIRQWGAHTKTRAEIRGGGRKPWKQKGTGRARAGSRRSPLWRGGGVA 80 Query: 85 FAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE 144 F R K+N+K R A K + ++ +V +E P ++ ++Q L + Sbjct: 81 FGPRGVAMECKLNRKESRKATKIAF--MACSKKIQIVNPPILEKPSSRTISQMLPPLPSR 138 Query: 145 DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 VL I E + +L+L+ RN+ + + A I L+ ++ ++ +A+ +E L Sbjct: 139 PVLWILHEKNPSLWLSCRNIKTLQLIQAEHIYVKPLLWAKQIWISHEAIPILENQL 194 >UniRef50_P75579 50S ribosomal protein L4 n=2 Tax=Mycoplasma RepID=RL4_MYCPN Length = 212 Score = 186 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 5/194 (2%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + +S ++ + V V+ A RQGT + T+ EV G GKKP++QK TG+AR G Sbjct: 18 VKLSPGLIAKELKQQPVFDAVLVEQASWRQGTHSILTKGEVRGGGKKPYKQKHTGKARQG 77 Query: 72 SIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK--FSVEA 128 S ++P + GG+ F +P +++S K+NKK + AL ++ SE + D +V++ F+ Sbjct: 78 STRNPHFVGGGIVFGPKPNRNYSLKLNKKAHTAALHTVWSEKLASDNTHLVDQNLFNKTE 137 Query: 129 PKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 KTK++ Q LK L ++VL + L+ NL + N+ V V+ + L+ + + Sbjct: 138 GKTKVMMQFLKSAKLLDKNVLFVVNTLNTNLEQSTSNIKNVQVKHLDKVSVRDLMLANAL 197 Query: 187 VMTADAVKQVEEML 200 ++ + +K +E Sbjct: 198 LVEKEVLKALEGKF 211 >UniRef50_D2R5T8 Ribosomal protein L4/L1e n=4 Tax=Planctomycetaceae RepID=D2R5T8_9PLAN Length = 209 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 2/193 (1%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + ++ L+H VVV Y A RQGT K R EV GS KK +RQKGTG A Sbjct: 14 VGKYEIDPAEIAPKISQQLLHDVVVMYQANLRQGTHRTKGRGEVAGSTKKMYRQKGTGNA 73 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R+GS +S + R GG FA RP+D+S ++ +K + A + ++ + Q+ ++V+++ S+ A Sbjct: 74 RAGSRRSGVRRGGGHIFALRPRDYSYRLPRKAVQAATRMAIAHKLNQNSVVVIDELSMAA 133 Query: 129 PKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 PKTK +A LK + L L+ T LD N++ +ARN+ KV V ++ +S++ K+ Sbjct: 134 PKTKEVATILKTLGLAGASTLVTTAGLDVNVYKSARNIDKVTVSPVADLNALSVLMPRKM 193 Query: 187 VMTADAVKQVEEM 199 ++T A+ ++ Sbjct: 194 LVTKAALDAIKTR 206 >UniRef50_D0RNM6 Ribosomal protein, L4/L1 family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNM6_9RICK Length = 209 Score = 186 bits (472), Expect = 5e-46, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 3/197 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 +L S+ F + ++ QV+ + T K+R EV GS KK +QKG+G Sbjct: 11 KNVGSLEASDKVFKVKPRKDIIQQVIDWQQNRMFKKTGHTKSRGEVKGSRKKIVQQKGSG 70 Query: 67 RARSGSIKSPIWRSGGVTFAARPQ-DHS-QKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 AR G+I +P++ GG+ R + +++ +K+NKK+ + L LS + D++ + + Sbjct: 71 GARHGNITAPVFVGGGIAHGPRHRGNYAVKKLNKKVRKLGLVHALSVKAKSDQIAIFNEP 130 Query: 125 SVEAPKTKLLAQKLKDMALEDVLII-TGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 + KTK LK++ + L I + + + +N+ + G + LI + Sbjct: 131 KISGLKTKNFKDFLKNIKSKSALFIHHKDAPKEFVRSIKNIPNSKKLEDVGTNVYDLIKY 190 Query: 184 DKVVMTADAVKQVEEML 200 +KV+ T ++ K +EE L Sbjct: 191 EKVLFTKESFKAIEERL 207 >UniRef50_A5IYY5 50S ribosomal protein L4 n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IYY5_MYCAP Length = 300 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 102/189 (53%), Gaps = 4/189 (2%) Query: 14 VSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGS 72 ++ F D + +++ A RQGT K+RAEV G GKKPWRQKGTGRAR+GS Sbjct: 111 LNPKLFASDKIYSQAIFDTIISDRASRRQGTHDVKSRAEVRGGGKKPWRQKGTGRARAGS 170 Query: 73 IKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 +SPIW GG F P +++ KVNKK+ A S+L+ L+ Q + +VV+ F +E+ T Sbjct: 171 TRSPIWVGGGRAFGPTPVRNYKLKVNKKVRFNAFVSVLT-LLAQSKAVVVDDFKLESIST 229 Query: 132 KLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 K KL ++ + E I+ DE + + NL V T + +LI D +V++ Sbjct: 230 KAAINKLSELGIKEQKHILIATNDEVTYKSVANLQNVICVKPTSVSVENLIWADVLVLST 289 Query: 191 DAVKQVEEM 199 + + E Sbjct: 290 EGYENFEGR 298 >UniRef50_B1AIM1 50S ribosomal protein L4 n=15 Tax=Mycoplasmataceae RepID=RL4_UREP2 Length = 211 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 4/188 (2%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 L V+ F ++ + V+A A RQGT + T+ EV G GKKPWRQK TG+AR Sbjct: 15 KELEVTSDLFVEVPHKQAMFDSVLAENAAERQGTHSTLTKGEVRGGGKKPWRQKHTGKAR 74 Query: 70 SGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLI-VVEKFSVE 127 +GS ++P W GGV F +P ++++ KVN K+ A KS L+ + + +++ +V +E Sbjct: 75 TGSTRNPHWTGGGVVFGPKPNRNYNLKVNAKVRLLAFKSALTIKLNEGKMLGLVANSDLE 134 Query: 128 APKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 P TK + + + LE VL++ + N+ + NL KV + + L+ + Sbjct: 135 TPSTKKMVNFINNANLENQKVLLVIVDNFSNIKKSTNNLQKVTTKLWYQVSVRDLMHANV 194 Query: 186 VVMTADAV 193 VV+ +A Sbjct: 195 VVVAEEAF 202 >UniRef50_Q9TLT3 50S ribosomal protein L4, chloroplastic n=1 Tax=Cyanidium caldarium RepID=RK4_CYACA Length = 219 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 104/177 (58%), Gaps = 3/177 (1%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 +VH+V +R+ T + KT+++V G GKKPW+QKGTGRAR+GSI+SP+WR GGV F Sbjct: 40 VVHRVFSIQNKLSREHTASTKTKSQVRGGGKKPWKQKGTGRARAGSIRSPLWRGGGVVFG 99 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE-- 144 +P++ K+NKK R AL ++LS + + ++ + T+ L + L+ + + Sbjct: 100 PKPKNVFFKINKKEIRLALYTVLSNALPKTTVVSSLEGLPNFISTQALIKFLRSLNVSLD 159 Query: 145 -DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 VLI+ + + LFL+ RN+ + + A ++ S+I +V+T A+K + + Sbjct: 160 NRVLIVVEKKETPLFLSCRNIKNLALIQADHLNVKSVILAQSLVVTLQALKIIYKTF 216 >UniRef50_O74801 60S ribosomal protein yml6, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=RL4P_SCHPO Length = 261 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 14/214 (6%) Query: 2 ELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWR 61 + + S + + F ++H+ V+ A RQGT + K R E+T SG+K +R Sbjct: 12 KFPSLEPASLFLIPGSFLQERFRRDILHRAVIYEADNDRQGTASSKRRNEITCSGRKLYR 71 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV 121 QKGTG AR G SPI R G + +P+D S K+ ++Y A++ LS + L ++ Sbjct: 72 QKGTGHARVGDASSPIRRGGAKSHGPKPRDFSTKLQTQVYNLAMRIALSTRFINNELTIL 131 Query: 122 EK-FSVEAPKTKLLAQKLKDMAL----EDVLIITGE--------LDENLFLAARNLH-KV 167 E ++ PKT++L + LK L L + + + NL LA+R L Sbjct: 132 ENPINLSQPKTRILLEVLKQHKLGHEYGKALFVLNDNYFEDESLKNNNLLLASRQLGYHC 191 Query: 168 DVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 + F K+ + ++A+ + E A Sbjct: 192 SFIPVGEFQVRDALKFGKLFIDSEAMSLIVEKFA 225 >UniRef50_Q252V4 50S ribosomal protein L4 n=15 Tax=Chlamydiaceae RepID=RL4_CHLFF Length = 224 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 15/204 (7%) Query: 7 DAQSALTVSETTFGRDFN-EALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + + + + F ++ N LV +VA A RQ + + R+EV+ S KKP+RQKGT Sbjct: 12 NKAGEVELPDAFFAQEGNGLQLVKDYIVAIRANKRQWSACTRNRSEVSHSTKKPFRQKGT 71 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 G AR G + +P +R GG+ F +P+ D ++NKK R A++ +LS+ ++ +RLIV + Sbjct: 72 GNARQGCLAAPQFRGGGIVFGPKPKFDQHVRINKKEKRAAIRLLLSQKIQTNRLIVADDS 131 Query: 125 ----SVEAPKTKLLAQKLKDMALE--DVLIITG----ELDENLFLAARNLHKVDVRDATG 174 S+ APKTK + LK +E VL I + +E L L+ RNL V A G Sbjct: 132 VFTKSLTAPKTKEALRFLKSCNVECRGVLFIDDLNHAQNNEGLRLSLRNLPAVRGF-AYG 190 Query: 175 IDP--VSLIAFDKVVMTADAVKQV 196 ++ L++ +V++ A+ + Sbjct: 191 MNVNGYDLVSARNIVISEKALTGL 214 >UniRef50_B7T1Y3 Ribosomal protein L4 n=1 Tax=Vaucheria litorea RepID=B7T1Y3_VAULI Length = 220 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 112/201 (55%), Gaps = 8/201 (3%) Query: 6 KDAQSALTVS-ETTFGRDFNEA--LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 K+ + LT++ + N++ L+H+ + RQGT KTRAEV G G+KPW+Q Sbjct: 19 KENITTLTLNIPKHYESKINKSNYLLHRALQTQLTNERQGTSNTKTRAEVQGGGRKPWKQ 78 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KGTGRAR+GS +SP+WR GGV F + + S K+N+K +R +L+ L +Q + ++ Sbjct: 79 KGTGRARAGSNRSPLWRGGGVIFGPKIKKFSNKINRKEWRLSLRL--LLLNKQKNITIIN 136 Query: 123 KFSVEAPKTKLLAQKLKDMALE---DVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 ++ KTK + Q + + ++ ++II DENL +NL V + A ++ Sbjct: 137 TIFLDFFKTKNIIQYILKLGIDPLQKLVIIIPNYDENLRRGTKNLKNVQLLKANCLNIKD 196 Query: 180 LIAFDKVVMTADAVKQVEEML 200 ++ + + + +++K +EE Sbjct: 197 ILKAEHIFIDINSLKIIEETY 217 >UniRef50_A5KRQ2 Ribosomal protein L4/L1e n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRQ2_9BACT Length = 199 Score = 183 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 6/193 (3%) Query: 13 TVSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 T+ +T F D N L+ AY A AR + K R EV G G+KP +QKGTGRAR+G Sbjct: 5 TLPKTVFAVDVPNHELLKLAYEAYLAEARTSAASTKKRGEVRGGGRKPHKQKGTGRARAG 64 Query: 72 SIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 SI+SP+WR GGVTF +++ +++N K R A++ L+ + ++I + K Sbjct: 65 SIRSPLWRGGGVTFGPSGNENYKKQLNVKAKRVAVRQALTLAAQAGKIITAD--VSATGK 122 Query: 131 TKLLAQKLKDMA--LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 TK + LKD + L++ E L A NL +++ AT + ++ DK++M Sbjct: 123 TKDMTAFLKDQKADVRRTLLVVSEKSPELIRATGNLQNIELVRATYLSVFHVLNADKIIM 182 Query: 189 TADAVKQVEEMLA 201 T A+ +E L Sbjct: 183 TPTAITAIEAWLG 195 >UniRef50_C1BS34 Mitochondrial 39S ribosomal protein L4 n=1 Tax=Lepeophtheirus salmonis RepID=C1BS34_9MAXI Length = 275 Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 5/194 (2%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + +G ++ + + K R E+ G G +PW QKGTGRAR Sbjct: 59 VDLHPDVWGVAPRLDIIADNLKWQENYKKVEYNYVKDRYELPGKGARPWPQKGTGRARHK 118 Query: 72 SIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF-SVEAP 129 S +SPIW GG + P+ + + + L LS QD +I+V+ F +E+ Sbjct: 119 SKRSPIWLQGGKAHGPKGPKTNFFMLPYQHRVNGLIHTLSVKFAQDDIIIVQNFDDLEST 178 Query: 130 KTKLLAQKLKDMALE-DVLIITGE--LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 + L + + L + G+ EN+ A+ ++ V+V + G++ S++ + Sbjct: 179 DPEDLEDLISERGWGLSTLFVNGDSIAPENITAASESILHVNVMPSFGLNVHSMLKHKTL 238 Query: 187 VMTADAVKQVEEML 200 V+T DAV +E+ L Sbjct: 239 VLTLDAVNLIEDKL 252 >UniRef50_Q8EUB4 50S ribosomal protein L4 n=1 Tax=Mycoplasma penetrans RepID=RL4_MYCPE Length = 213 Score = 181 bits (461), Expect = 8e-45, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 4/186 (2%) Query: 20 GRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWR 79 + N + V+ A +RQ T + T+AEV G G+KP++QK TGRAR GSI++P + Sbjct: 28 DKKINHQEIFNSVLVEEANSRQSTASTLTKAEVRGGGRKPYKQKHTGRARQGSIRNPHYV 87 Query: 80 SGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRL-IVVEKFSVEAPKTKLLAQK 137 GG F P ++++ K N K Y+ A +S ++ + + L ++V K ++ P TK +++ Sbjct: 88 GGGRAFGPSPEKNYTLKQNSKAYKLAFQSAMTLKLNEQGLNLLVNKIDMKEPSTKTISKM 147 Query: 138 LKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQ 195 LK ++ E VL + + +EN + +N+ KV + + ++ D V+ DA + Sbjct: 148 LKKVSYENKKVLFVINDKNENFLKSCKNIQKVTSKMWNQVSVRDILNSDIAVIQEDAFDK 207 Query: 196 VEEMLA 201 + E+ A Sbjct: 208 ISEVFA 213 >UniRef50_Q6KI54 50S ribosomal protein L4 n=1 Tax=Mycoplasma mobile RepID=RL4_MYCMO Length = 293 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 110/198 (55%), Gaps = 10/198 (5%) Query: 9 QSALTVSETTFGR---DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 ++ +++ + FG N + ++ A RQGT + KTR+EV+G GKKPW+QKGT Sbjct: 97 KNTVSLPKGIFGLSEEKINTQAIFDSILFERASQRQGTHSTKTRSEVSGGGKKPWKQKGT 156 Query: 66 GRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 GRAR+GS +SPIW GG+TF +P + + K+NKK+ A S L+ L+ I+VE Sbjct: 157 GRARAGSTRSPIWVGGGITFGPKPQKKYDFKINKKVRNLAFLSSLT-LLANKNAILVEDL 215 Query: 125 SVEAPKTKLLAQKLKDM---ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 +E ++ L +KL+D+ L+ +LI++ DE +F + RN+ + V + L Sbjct: 216 KLEKISSQELIKKLEDLKINNLKKILIVSD--DEKIFKSGRNVQNLHVVKLNSLTVELLN 273 Query: 182 AFDKVVMTADAVKQVEEM 199 ++++ + +E Sbjct: 274 ETHALLLSKKDLTTLESR 291 >UniRef50_Q4A5C2 50S ribosomal protein L4 n=1 Tax=Mycoplasma synoviae 53 RepID=RL4_MYCS5 Length = 229 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 64/180 (35%), Positives = 108/180 (60%), Gaps = 3/180 (1%) Query: 22 DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSG 81 + ++ + +++ A RQGT K RA V+GSGKKPW+QKGTGRAR S +SPIW G Sbjct: 46 EVHQQAIFDSILSERASRRQGTHQVKNRAAVSGSGKKPWKQKGTGRARHSSRRSPIWVGG 105 Query: 82 GVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKD 140 G F + +++S KVNKK+ + A +S L+ LV D+ ++VE F ++ TK L+QKLK Sbjct: 106 GRAFGPQSVKNYSLKVNKKVKQLAFRSALTMLV-NDKAVLVEDFKMDKISTKDLSQKLKS 164 Query: 141 MALEDV-LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 + ++ + +I + +F ++ NL V A ++ +L+ D +++ +++K + E Sbjct: 165 LNVDKLRHVILVSENATVFKSSANLKNVTTLKAHSLNVETLVRADVLLVENESMKLLTER 224 >UniRef50_C7Z3X5 Predicted protein n=3 Tax=Sordariomycetes RepID=C7Z3X5_NECH7 Length = 321 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 25/203 (12%) Query: 21 RDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRS 80 ++H VV RQGT + K R E+ GS +K QKGTGRAR G+ +SP+ R Sbjct: 90 LPLRRDILHLAVVFEGDNTRQGTASTKNRWEINGSHRKMRPQKGTGRARLGTKQSPLLRG 149 Query: 81 GGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE---------KFSVEAPKT 131 GG F +P+D +N+K+Y A ++ LS R+ LIV E F + A K Sbjct: 150 GGKVFGPKPRDFGTGLNRKVYDKAWRTALSYRYRKGDLIVCEDGMDLALPTDFELLAGKY 209 Query: 132 -----------KLLAQKLKDMAL----EDVLIITGELDENLFLAARNLHKV-DVRDATGI 175 K + L ++ L L +TG E LF A + D + Sbjct: 210 LKDGMKETYLKKYMTGMLGNLGLGRASGRTLFVTGNRREALFEAMEQVPWEGRALDLEDV 269 Query: 176 DPVSLIAFDKVVMTADAVKQVEE 198 D L+ KVV+ +K++ E Sbjct: 270 DVKDLLETGKVVLERSVLKEMIE 292 >UniRef50_Q075M8 Plastid 50S ribosomal protein L4 family (Fragment) n=1 Tax=Prototheca wickerhamii RepID=Q075M8_PROWI Length = 228 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 49/130 (37%), Positives = 71/130 (54%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + T+ F ++H+VV A +QGT KTR EV G G+KP QKG G Sbjct: 79 RSVGSFTLGGDVFNTVVRPDILHRVVRWQLAARQQGTHKTKTRTEVRGGGRKPRPQKGGG 138 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 +R GSI++P WR GGV P+ H+ K+ K + R L+S LS R+ RL++V+ + Sbjct: 139 VSRQGSIRAPQWRGGGVAHGPVPRSHAIKLLKSIRRLGLRSALSAKAREGRLVIVDTLRL 198 Query: 127 EAPKTKLLAQ 136 KT+ LA Sbjct: 199 PEAKTRALAD 208 >UniRef50_Q6ME62 Putative 50S ribosomal protein L4 n=3 Tax=Parachlamydiaceae RepID=Q6ME62_PARUW Length = 196 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 21/195 (10%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++ +VA A ARQ + + KTRAEV + KK QKG GRAR GS +P +R GG F Sbjct: 1 MIKDYIVALRANARQWSASTKTRAEVKHTTKKAHPQKGQGRARHGSTVAPQYRGGGRAFG 60 Query: 87 ARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE- 144 RP+ D ++NKK + A++ +LSE ++++++ ++E +++APKTK LAQ L+ L Sbjct: 61 PRPKFDQHVRINKKERKAAIRFLLSEKLKENKVWLIEDTAMDAPKTKTLAQFLRGFDLRG 120 Query: 145 DVLI-------------------ITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 VL I+ + + + RNL + + A+ I+ ++ + Sbjct: 121 RVLFLGETTFTDVETEGKVQRVSISTDKHNHFVKSMRNLPRANFMLASNINGYDVMIARE 180 Query: 186 VVMTADAVKQVEEML 200 +V+T A+ ++ + L Sbjct: 181 IVLTESALNELNQWL 195 >UniRef50_C8V2I4 50S ribosomal protein L4 (AFU_orthologue; AFUA_5G12800) n=9 Tax=Eurotiomycetidae RepID=C8V2I4_EMENI Length = 287 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 7/182 (3%) Query: 22 DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSG 81 + ++H+ VV RQGT + K R +V GS +K + QKGTGRAR G KSPI R G Sbjct: 89 PLRKDILHRAVVYEGDMTRQGTASTKWRGDVHGSNRKLYAQKGTGRARVGDKKSPIRRGG 148 Query: 82 GVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK-FSVEAPKTKLLAQ---K 137 GV F P+D S ++ +K+Y A + LS R+ +LI+++ + T + K Sbjct: 149 GVAFGPHPRDFSTELPRKIYDQAWRIALSYRYRRGQLIIIDNEIGIPEDATPYFIKEIFK 208 Query: 138 LKDMALE--DVLIITGELDENLFLAARNL-HKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 E +IT + E LF R++ + D +D L+ ++++ A+ Sbjct: 209 FNRWGREFGRSTLITDRVHEELFETVRSVGEDAKILDRGDVDVKDLLETGRLIVEKRALD 268 Query: 195 QV 196 ++ Sbjct: 269 RI 270 >UniRef50_A2R423 Contig An14c0190, complete genome n=6 Tax=Trichocomaceae RepID=A2R423_ASPNC Length = 289 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 7/182 (3%) Query: 22 DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSG 81 + ++H+ VV RQGT + K R +V GSG+K QKGTGRAR G KSPI R G Sbjct: 91 PLRKDILHRAVVYEGDMTRQGTASTKWRDDVHGSGRKLHAQKGTGRARVGDKKSPIRRGG 150 Query: 82 GVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK-FSVEAPKTKLLAQKLKD 140 GV F P+D S ++ +K+Y A + LS ++ +LI+V+ ++ T + +++ Sbjct: 151 GVAFGPHPRDFSTELPQKIYDQAWRIALSYRYKRGQLIIVDNEIALPEGATPHIVEEIFK 210 Query: 141 MALE-----DVLIITGELDENLFLAARNL-HKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 + +IT + +E LF R + D +D L+ ++++ A+ Sbjct: 211 VNCWGRHYGRSTLITDQPNEELFETVRQAGEHAKILDRRDVDVKDLLETGRLIIEKQALD 270 Query: 195 QV 196 ++ Sbjct: 271 RI 272 >UniRef50_O46895 50S ribosomal protein L4, chloroplastic n=1 Tax=Guillardia theta RepID=RK4_GUITH Length = 223 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 7/205 (3%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + L D +S +++ + L+H+V+ R G KTR+EV G GKKPW Sbjct: 18 VSLNKMDTKSHDSLNLNV--SKKSRYLLHRVLTNQLINNRSGNACTKTRSEVEGGGKKPW 75 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 +QKGTG AR+GS SP+W+ GGVTF +P+ S K NKK AL + L ++I Sbjct: 76 KQKGTGNARAGSSNSPLWKGGGVTFGPKPRTFSNKTNKKERLLALTTALYLKSNNTKVIN 135 Query: 121 VEKFSVEAPKTKLLAQKLKDM-----ALEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 ++ KT+ L K ++ + +L + L+ +N+ VD+ TG+ Sbjct: 136 LDNLDFTNLKTRDLVIKCSNLIENYKKDQKILFVAEPTASGLWRYVKNISNVDLIYTTGL 195 Query: 176 DPVSLIAFDKVVMTADAVKQVEEML 200 D ++ ++ T A+ V+E+ Sbjct: 196 DLKKILQAHHIIFTCKALNDVKEVF 220 >UniRef50_A8Q8Q6 Ribosomal protein L4/L1 family protein n=1 Tax=Brugia malayi RepID=A8Q8Q6_BRUMA Length = 303 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 5/193 (2%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 +++ F L+H+ + Q ++ E+ G G KPW QK TGR +G Sbjct: 72 ISLHPDIFRTMPRIDLLHRNITWQENYRNLAITKQLSKKEMPGGGHKPWPQKKTGRHHAG 131 Query: 72 SIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF-SVEAP 129 SI+SP +R GG R P+ + + L ++ Q+ L++V+ F S+ Sbjct: 132 SIRSPHFRLGGFANGIRGPKTWFYVLPDAIRLEGLCIAVTIKHAQNDLVIVDNFASLPNA 191 Query: 130 KTKLLAQKLKDMALE-DVLIITG--ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 + + +L I E+ EN+ + +V GI+ SL+ D V Sbjct: 192 DAQFMHDLADSRNWGYSILFINDSSEVPENMAKVCDEIPTFNVMPVYGINCFSLVKHDTV 251 Query: 187 VMTADAVKQVEEM 199 + + A++ + Sbjct: 252 IFSLAALQLFQSR 264 >UniRef50_A8Z669 50S ribosomal subunit protein L4 n=3 Tax=Candidatus Sulcia muelleri RepID=A8Z669_SULMW Length = 207 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 19 FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW 78 F + N ++ + Y + RQGT K R+E+TGS KK RQKG+G AR G IK+PI+ Sbjct: 23 FLKKENNNILFLDIKRYLSAQRQGTNKSKERSEITGSTKKIQRQKGSGNARKGDIKNPIF 82 Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKL 138 RSGG F +P++ + K+N K A K+IL+ +R +++ V+E F KTKL+ + L Sbjct: 83 RSGGRIFGPKPRNFNIKINNKSKFLAKKTILNFKLRTNKIKVIEDFKFNIIKTKLVFKIL 142 Query: 139 K----DMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 + ++ LII ++++ F ++RNL + ++ L D +V A+K Sbjct: 143 NRLNFNFNIKKSLIIYNKINDIFFFSSRNLKFTNFLSINELNSYELANSDYLVFFESAIK 202 Query: 195 QV 196 ++ Sbjct: 203 KI 204 >UniRef50_B2WIG6 50S ribosomal protein L4 n=5 Tax=Leotiomyceta RepID=B2WIG6_PYRTR Length = 575 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 6/182 (3%) Query: 21 RDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRS 80 ++H+ VV R GT + KTR EV GS +K QKGTG AR G SP+ R Sbjct: 92 LPTRRDILHRAVVYEGDATRLGTASTKTRHEVHGSRRKVRPQKGTGHARLGDRMSPMLRG 151 Query: 81 GGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK-FSVEAPKTKLLAQKLK 139 GGV F +P+D S ++ KK+Y A ++ LS R+ LI+V+ +E+P T+LLA + Sbjct: 152 GGVAFGPKPRDFSSELPKKVYDLAFRTALSYRFRKGELIIVDNAMELESPSTRLLADIFR 211 Query: 140 D----MALEDVLIITGELDENLFLAARNLHKVD-VRDATGIDPVSLIAFDKVVMTADAVK 194 L++T E L A ++ + +D L+ ++++ DA++ Sbjct: 212 HHEKLWGRGRSLMVTLEERPLLEQALVDMDRRKQAILWNKVDVKYLLELSRIIIERDALQ 271 Query: 195 QV 196 + Sbjct: 272 NI 273 >UniRef50_Q0INA7 Os12g0488600 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0INA7_ORYSJ Length = 346 Score = 175 bits (444), Expect = 8e-43, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 79/133 (59%), Gaps = 2/133 (1%) Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 KP++QKGTGRAR G+++ P +R G +P+ H+ K+ KK+ R LK LS + + Sbjct: 173 KPYKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGK 232 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDM-ALEDVLIIT-GELDENLFLAARNLHKVDVRDATGI 175 L+V E V + KTK + + M + VL++ G++D+ L LA +NLH V+V + G+ Sbjct: 233 LLVFEDLEVPSHKTKNVVSYISQMEDTKKVLLVDGGDIDKKLKLATQNLHYVNVLPSIGL 292 Query: 176 DPVSLIAFDKVVM 188 + S++ D + + Sbjct: 293 NVYSILQHDTLWL 305 >UniRef50_Q1CRU2 50S ribosomal protein L4 n=81 Tax=Epsilonproteobacteria RepID=RL4_HELPH Length = 215 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 102/197 (51%), Gaps = 11/197 (5%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + ++ + + G N ++ V Y + R T K RAEV+G G+KPW QKG GRA Sbjct: 14 KGSVELPKRYEG--INSHNLYLYVKHYLSSVRANTAKSKNRAEVSGGGRKPWAQKGGGRA 71 Query: 69 RSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS-- 125 R+GSI SP++ GGV+ A ++++ K+NKK R AL+ L E + ++L VVEK + Sbjct: 72 RAGSITSPVFVGGGVSHGATNKRNYNLKINKKQKRLALEYALEEKAQANKLFVVEKIAIK 131 Query: 126 --VEAPK----TKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 VE K TK Q + + D L + +DE LA NL K + D ++ Sbjct: 132 GVVEDNKRKHLTKEANQMFQALEQRDTLFVCLNMDECTELAFSNLKKCLIIDVNELNAYL 191 Query: 180 LIAFDKVVMTADAVKQV 196 L AF VVM A + V Sbjct: 192 LAAFSSVVMEEAAFQHV 208 >UniRef50_D2IS95 Ribosomal protein L4 n=1 Tax=Cryptomonas paramecium RepID=D2IS95_9CRYP Length = 214 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 9/191 (4%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 Q +T++ T + ++ H+++ R T KTRAEV G G+KPW+QKGTGRA Sbjct: 21 QPTITLNLKTCA-EVSKFFFHRILTIQNKNQRCKTACSKTRAEVRGGGRKPWKQKGTGRA 79 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SV 126 R+GS SP+W+ GGV F +P +++K+N K + A+ + L ++++V F S+ Sbjct: 80 RAGSSVSPLWKGGGVVFGPKPTVYNKKINFKERQLAIFTGLY--ACSYKIVIVRNFVSSI 137 Query: 127 EAPKTKLLAQKLK----DMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 P+TK L + + +LI+ + E L+ + RN+ K+ + + + Sbjct: 138 AQPRTKAFLGLLSSFDPSLLSKRILILVPKATETLYSSCRNVEKITIGSRKTLTLRDIFL 197 Query: 183 FDKVVMTADAV 193 D +++ +A+ Sbjct: 198 ADSILIAEEAL 208 >UniRef50_Q06RI4 23S ribosomal protein L4 n=1 Tax=Brucella ceti RepID=Q06RI4_9RHIZ Length = 176 Score = 173 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 31/192 (16%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 + ++E FG D + ++ +VV A RQ+G+ +A Sbjct: 14 GKVKLNEEIFGLDPRDDILQRVVRWQLA----------------------RRQQGSHKA- 50 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 R GG ++H + KK+ L+ LS + LI+++ + Sbjct: 51 -------QGRGGGQAHGPVVRNHDHDLPKKVLALGLRHALSAKAKASDLIIIDDLASADA 103 Query: 130 KTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 KTK L + + LE+ L+I G E+D N AA N+ +DV GI+ ++ K+V+ Sbjct: 104 KTKQLVSQFAKLGLENALLIGGAEIDANFQRAASNIPNIDVLPVQGINVYDILRRGKLVL 163 Query: 189 TADAVKQVEEML 200 + AV+ +EE Sbjct: 164 SKAAVEALEERF 175 >UniRef50_B4CUX4 Ribosomal protein L4/L1e n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUX4_9BACT Length = 203 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 70/178 (39%), Positives = 110/178 (61%), Gaps = 1/178 (0%) Query: 25 EALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVT 84 ++H V A A R GT + KT+A V GSG KPWRQKGTGRAR+G SP+W GGV Sbjct: 25 SQVIHDTVTALRANRRSGTASVKTKATVNGSGAKPWRQKGTGRARAGYKSSPVWVGGGVV 84 Query: 85 FAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE 144 F P+D+S+KV K + + AL+ LSE ++ + +V++F+++ PKTK A + + E Sbjct: 85 FGPHPRDYSKKVAKSVKKLALRKALSERIKSGDVFIVDEFAIKEPKTKQFAAAIALITEE 144 Query: 145 -DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 L+++ D+N +L+ARN+ + A+ ++ L+ F K+V+T D + Q+ + LA Sbjct: 145 PKTLVVSAAFDKNTYLSARNVQPAQLITASEVNTEQLLNFRKIVITNDGLAQIADRLA 202 >UniRef50_B2XTF4 50S ribosomal protein L4 n=2 Tax=Heterosigma akashiwo RepID=B2XTF4_HETA2 Length = 231 Score = 172 bits (437), Expect = 5e-42, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 23/201 (11%) Query: 22 DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSG 81 + L+H+ V +R G KTR+EV G G+KPW+QKGTGRAR+GS +SP+W+ G Sbjct: 31 EKGNYLIHRAFVKQFIESRNGNANTKTRSEVRGGGRKPWQQKGTGRARAGSNRSPLWKGG 90 Query: 82 GVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS-----------VEAPK 130 GVTF + + + K+NKK +R AL+++L ++ + V++ FS K Sbjct: 91 GVTFGPKTKTYKIKLNKKEWRLALQTLLFNK--KNSIRVIKSFSETFERISKEQGSNPQK 148 Query: 131 TKLLAQKL------KDMAL----EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 TK L L +++ +LI+ + NL ++NL +D+ A ++ SL Sbjct: 149 TKTLLNFLNQFVKIRNLNSNNIRNKILIVVPKKSLNLISTSQNLKNIDIIAADNLNIKSL 208 Query: 181 IAFDKVVMTADAVKQVEEMLA 201 + +++ +++K +EE Sbjct: 209 LDSKYILLCTESLKIIEETYG 229 >UniRef50_UPI000180C8CE PREDICTED: similar to mitochondrial ribosomal protein L4 n=1 Tax=Ciona intestinalis RepID=UPI000180C8CE Length = 330 Score = 172 bits (437), Expect = 5e-42, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 8/197 (4%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 S + + F ++H VV +TRAE+ KKPW QKGTGRA Sbjct: 92 NSVVQLHPVLFDTHPRMDILHSVVRWQQEYREVDYSWSRTRAEIGRGKKKPWPQKGTGRA 151 Query: 69 RSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK--FS 125 R GS SP+W GG++ R P+ ++N L LS Q+ LI++E S Sbjct: 152 RHGSSNSPLWVKGGISQGPRGPRASFYELNPNTLLDGLLIALSIKHIQNDLIIIESAQIS 211 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENL-FLA--ARNLHKVDVRDATGIDPVSLIA 182 + P + ++++ +L++ E +EN+ +L A + +++ G++ S++ Sbjct: 212 QDMPDFDEYLEN-RNLSEASMLLVHAE-NENISYLEHLAEDSKLLNIMPLYGLNVCSILK 269 Query: 183 FDKVVMTADAVKQVEEM 199 DK+V++ + ++E Sbjct: 270 HDKLVLSRCILDELEHK 286 >UniRef50_B3E0I5 50S ribosomal protein L4 n=1 Tax=Methylacidiphilum infernorum V4 RepID=RL4_METI4 Length = 222 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 65/177 (36%), Positives = 100/177 (56%), Gaps = 1/177 (0%) Query: 24 NEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGV 83 + ++H +V Y A +R GTRA KT+A V SGKKPWRQKGTGRAR+G + SP+W GGV Sbjct: 29 RDQVLHDALVGYLANSRSGTRATKTKATVKASGKKPWRQKGTGRARAGYVSSPVWVGGGV 88 Query: 84 TFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM-A 142 F +P+D S+ + KK+ AL + VR + + +EK + KTK + L+ Sbjct: 89 VFGPQPRDFSKNIPKKIKGLALLKAFAAKVRSEEVYCLEKVEMTEIKTKKMLSLLEGWDG 148 Query: 143 LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 E L+I N+ L+ RN+ + + A ++ + L+ F KV + A++ + E Sbjct: 149 KESGLLILKNPSRNVLLSGRNIPHLGIVRAQDVNALDLLGFKKVFLERPAIEVLVER 205 >UniRef50_Q4FLL9 50S ribosomal protein L4 n=3 Tax=Candidatus Pelagibacter RepID=RL4_PELUB Length = 207 Score = 169 bits (430), Expect = 4e-41, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 3/203 (1%) Query: 2 ELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWR 61 +L L + ++ V + F N+ LV V+ A + K + E+TGS K + Sbjct: 5 KLNLDGKKDSIEVLDKIFSAKINKRLVDNVLYKTNANYKGRHAKTKQQNEITGSTSKIYA 64 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAARPQ--DHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKGTG AR S K+PI+ GGV + + +K+NK + ++ S+++E + + LI Sbjct: 65 QKGTGGARHASRKAPIFVGGGVAHGPKGELAYKKRKLNKSEKKLSIASLITEKNKLNNLI 124 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELD-ENLFLAARNLHKVDVRDATGIDPV 178 + F E KTK + +K + + LII + E + + RN+ V V D Sbjct: 125 IFSDFGNEIKKTKEMHSIIKKFEITNSLIILDKSSKEKIEKSVRNIPNVKVTDINHFSAF 184 Query: 179 SLIAFDKVVMTADAVKQVEEMLA 201 +I F KVV T ++K++E+ + Sbjct: 185 DIIKFKKVVFTESSIKELEKRYS 207 >UniRef50_Q4EE76 Ribosomal protein L4/L1 family n=1 Tax=Listeria monocytogenes str. 4b H7858 RepID=Q4EE76_LISMO Length = 149 Score = 169 bits (429), Expect = 4e-41, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 1/131 (0%) Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 SI+SP WR GGV F P+ ++ K+ KK+ R A+KSILS V +++L+V+E + +APKT Sbjct: 19 SIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPKT 78 Query: 132 KLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 K A LK+++++ LI+ EN+ L+ARNL + V A I + + DK+++T Sbjct: 79 KEFAAFLKNISVDTKALIVVAGESENVELSARNLQGITVIPAESISVLEVAKHDKLIITK 138 Query: 191 DAVKQVEEMLA 201 AV++VEE+LA Sbjct: 139 AAVEKVEEVLA 149 >UniRef50_Q601L4 50S ribosomal protein L4 n=6 Tax=Mycoplasma RepID=RL4_MYCH2 Length = 214 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 111/190 (58%), Gaps = 4/190 (2%) Query: 13 TVSETTFGR-DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + ++ F + + + + +++ A R T K RAEV+G+GKKPW+QK TG+AR+G Sbjct: 25 DLPKSLFEQKEPHFQAIFDSILSERASKRLSTHKVKNRAEVSGTGKKPWKQKSTGKARAG 84 Query: 72 SIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 S +SPI+ GG F ++++ KVNKK+ + A S LS+ + Q++ I+V FS+ Sbjct: 85 SKRSPIFVGGGRAFGPTTQRNYNLKVNKKVKKLAFISALSQ-LAQNQQILVNDFSMNKIS 143 Query: 131 TKLLAQKLKDMALEDV-LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 TKLL +LK ++ + I+ D NLFL+ARNL V++ + SLI D ++++ Sbjct: 144 TKLLVDQLKIFKIDQLRHILIASSDPNLFLSARNLPNVELVKTNSLTVESLIKADLLIIS 203 Query: 190 ADAVKQVEEM 199 + + +E+ Sbjct: 204 KNEITNLEKR 213 >UniRef50_Q5KM69 Ribosomal protein L4, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KM69_CRYNE Length = 406 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 86/249 (34%), Gaps = 64/249 (25%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + F + ++H+ VV Y + R GT++ K+R+ V SG+K QKGTG+AR+G Sbjct: 126 IALPPDVFAQPIRRDILHRCVVWYLSQLRSGTKSTKSRSTVAYSGRKLIPQKGTGKARAG 185 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV---------- 121 S R G P++ +Q + +K+ ++ LS ++ L VV Sbjct: 186 DASSGTRRGGAPIHPIFPKNWAQALPRKVRELGMRVALSSKLKAGLLRVVPNLNEAGWKG 245 Query: 122 -----------------EKFSVEAPKTKL------------------------------- 133 E ++A KT Sbjct: 246 TNEAKRALADALTFPEVEDSEMQATKTNTEPVAQDAVQAVEKVNELEGTVPEATSSAIKP 305 Query: 134 -LAQKLKDMALEDVLIITGEL---DE--NLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 + VL + DE + RN+ V+V + ++ + +V Sbjct: 306 GFIPRFGPAKDLSVLFLYSPFKPSDEIADFVRVTRNIPGVEVLSTEEVQVYDILKYRWLV 365 Query: 188 MTADAVKQV 196 M +AV Sbjct: 366 MEGEAVDWF 374 >UniRef50_Q7RXV7 60S ribosomal protein L4, mitochondrial n=5 Tax=Sordariomycetes RepID=Q7RXV7_NEUCR Length = 349 Score = 167 bits (425), Expect = 1e-40, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 38/210 (18%) Query: 21 RDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRS 80 ++H V+ R+G + KTR EV GS KK QKGTG AR G+ +SP+ + Sbjct: 114 LPLRRDILHLAVIYEGDSTRRGMASTKTRYEVHGSHKKMSPQKGTGNARRGTRQSPLMKG 173 Query: 81 GGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK-FSVEAPKT-------- 131 GG TF +P+D S K+NKK+Y A ++ LS ++ LIV E + P Sbjct: 174 GGKTFGPKPRDFSTKLNKKVYDLAWRTALSYRYKRGELIVTEDGLDLPLPNDFLWLAGGG 233 Query: 132 ------------KLLAQKLKDMALED----VLIITGELDENLFLAARNLHKVDVRDATG- 174 K + + + + ITG+ NLF ++ A G Sbjct: 234 KLSRELEDGYVRKWVHEFMTSLNWGKEAGRTTFITGDKRPNLF------TGFELAGAEGR 287 Query: 175 ------IDPVSLIAFDKVVMTADAVKQVEE 198 +D L+ ++V+ A+K++ E Sbjct: 288 ALELWDVDVKDLLETGRIVIERSALKEMIE 317 >UniRef50_B6HLY3 Pc21g08410 protein n=3 Tax=mitosporic Trichocomaceae RepID=B6HLY3_PENCW Length = 311 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 6/196 (3%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + Q + S ++H+ VV RQG+ + K R +V GS KK + QKG+G Sbjct: 77 EPQRLVHYSRRLLQMPTRHDILHRAVVYEGDSTRQGSASTKWRDDVHGSHKKLYAQKGSG 136 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK-FS 125 RAR+G SP+ R GGV F P+D S + +K+Y A + LS + + LIVV+ Sbjct: 137 RARAGDKMSPVRRGGGVAFGPHPRDFSTDLPRKIYDQAWRIALSHRLSRGELIVVDNTID 196 Query: 126 VEAPKTKLLAQKL-KDMAL---EDVLIITGELDENLFLAARNLHK-VDVRDATGIDPVSL 180 + + + L + +T E +E A +D ++ Sbjct: 197 INEASSPFFIKNLIQAHGWYHKGRSTFVTLEPNEMFSDAVEKFGNHARTICVEDLDVKNV 256 Query: 181 IAFDKVVMTADAVKQV 196 + ++V+ +A+ ++ Sbjct: 257 LERARLVIEKNALHKI 272 >UniRef50_Q6UCS1 Ribosomal protein L4 n=1 Tax=uncultured marine alpha proteobacterium HOT2C01 RepID=Q6UCS1_9PROT Length = 229 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 108/200 (54%), Gaps = 1/200 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 M + ++ + + F ++V +V + + K R+EV G+ +K Sbjct: 28 MHKIDGKKSGSVNLKDQLFNSKSGLSVVGSLVRWSESNQKPLRARTKNRSEVKGTTQKLG 87 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKG+G AR GS K+ I+RSGG+ R +K+ K+ + ALK I ++ ++ + LI+ Sbjct: 88 RQKGSGGARHGSKKANIFRSGGMAHNLRGVRSLKKMPKRTRQEALKHIFADKLKNNNLII 147 Query: 121 VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDE-NLFLAARNLHKVDVRDATGIDPVS 179 VE+ +E PKTK+LA+ L D+ LI+ G+ + N LA+RNL + + + Sbjct: 148 VEELKIEEPKTKILAKSLSDLNAHSALILEGDKPDNNFVLASRNLKNIKYSSINNFNALD 207 Query: 180 LIAFDKVVMTADAVKQVEEM 199 L+ F+K++M+ +A++ +E Sbjct: 208 LLGFEKLIMSKNALEILESR 227 >UniRef50_Q8GM59 50S ribosomal protein L4 n=3 Tax=Mycoplasma RepID=Q8GM59_MYCHO Length = 322 Score = 166 bits (420), Expect = 5e-40, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 112/193 (58%), Gaps = 8/193 (4%) Query: 10 SALTVSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 S+ + ++ FG + + +++ R T KTR EV+GSGKKPW QK TG A Sbjct: 129 SSENLPKSVFGLEKIYNQAIFDAILSERGSRRLATHKTKTRGEVSGSGKKPWDQKHTGNA 188 Query: 69 RSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 R+GS++SPI+ GG F ++++ K+NKK R AL S L+ +D ++V+++S+ Sbjct: 189 RAGSLRSPIFVGGGKVFGPTTERNYNLKINKKTRRNALLSA-LTLLAKDHAVLVKEYSLS 247 Query: 128 APKTKLLAQKLKD---MALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 T+ L KL + +L VL+++ +E +FL+ARNL V V T + SL+A D Sbjct: 248 KISTRELLIKLNEDKIASLNKVLLVSN--NETVFLSARNLPNVTVTKVTSLSVESLLAAD 305 Query: 185 KVVMTADAVKQVE 197 +V+++D VK +E Sbjct: 306 VLVISSDDVKYLE 318 >UniRef50_B6K4T6 50S ribosomal protein L4 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K4T6_SCHJY Length = 245 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 14/212 (6%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + L + ++ + VV A R GT K+R+E+ SGKK Q Sbjct: 10 FPSLEPMGFLHIPRPFLTEPLRRDILQKAVVFEANRDRAGTANTKSRSEINCSGKKLRPQ 69 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KGTGRAR G SP+ R G V +P+D + K+ K++ A++ LSE RQ+ L+V++ Sbjct: 70 KGTGRARLGDASSPMLRGGAVAHGPKPRDFTTKMPTKIFSKAMRVALSERFRQNELLVLD 129 Query: 123 K-FSVEAPKTKLLAQK--LKDMALE--DVLIITGEL--------DENLFLAARNLH-KVD 168 E +KLL L D+ L I +L ++ A +L + Sbjct: 130 SPLHTEQLTSKLLNAFVKLHDLGAPYGRTLFILDDLSYSTSAATNKRFIEATTSLGRHCE 189 Query: 169 VRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 A+ + + F K+ + A + ++ Sbjct: 190 FLPASQLQIRHALKFGKLAIEHKAFSTLYQLY 221 >UniRef50_A8J5Z5 Mitochondrial ribosomal protein L4 (Fragment) n=4 Tax=cellular organisms RepID=A8J5Z5_CHLRE Length = 124 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 44/119 (36%), Positives = 66/119 (55%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + + F ++H+VV + A +QGT K+RAEV+G GKKPW QK T Sbjct: 6 ERPLGLAPLPGAAFNVPVRIDILHRVVRYWRAKWQQGTHKAKSRAEVSGGGKKPWNQKKT 65 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 GRAR GSI+SP+W+ GGV+ A RP+ H+ + + ++ LS + + R VV+ Sbjct: 66 GRARQGSIRSPLWKGGGVSHAPRPRSHAHALPRSTRLLGMRCALSAKINEGRFFVVDDL 124 >UniRef50_C5KH52 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KH52_9ALVE Length = 497 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 11/199 (5%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYA---AGARQGTRAQKTRAEVTGSGKKPWRQK 63 + ++ V + F + +++ + AG +Q Q + E GS KK K Sbjct: 117 EEIGSIIVPNSIFAEPIRKDILYFTYWWHRGCMAGYQQD--MQLFKWEWPGSNKKARSHK 174 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 G++R G K+P G + RP++ Q K+ +LK +LS Q + VV+ Sbjct: 175 NIGKSRMGRRKAPGKYDGVFSIPQRPREWRQGELKRRVWKSLKMMLSAKFAQGEITVVDS 234 Query: 124 FSVEAPKTKLLAQKLKDMALE---DVLII---TGELDENLFLAARNLHKVDVRDATGIDP 177 F+V KT+ +A L+ + L+I T ++++N ++ +V D G+ Sbjct: 235 FNVSTHKTRHVAAHLRRLLGRHCNSALLIHVGTSDVNDNFRWGTAHIAQVRREDVEGVST 294 Query: 178 VSLIAFDKVVMTADAVKQV 196 +L+ + ++V+T A+ ++ Sbjct: 295 YNLLKYRQIVITEQALHKL 313 >UniRef50_A0CQM2 Chromosome undetermined scaffold_24, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0CQM2_PARTE Length = 318 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 3/193 (1%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 ++ + + F + LV ++V ++ T+A + SG K QK TGRAR Sbjct: 49 SIALDQEIFNQPIRRDLVQRLVRYTDLYDKKVTKATLALRDAAASGAKNHPQKKTGRARQ 108 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 G + P G + + + +K+ A K L+ + + + V++ + K Sbjct: 109 GHRQRPGRNKGIKAHGRKIRSLRIDLPRKVRLQAYKVGLTAALIEGKFTVIDTEKLNEGK 168 Query: 131 TKLLAQKLKDMAL--EDVLIITGELDENLFL-AARNLHKVDVRDATGIDPVSLIAFDKVV 187 TK L Q +K + +LI+T ++LFL A+RNL ++ + + ++ F ++ Sbjct: 169 TKHLVQLMKGFESFTQPLLIVTSVDPDDLFLRASRNLENLETCTVKEFNIIKILKFKSIL 228 Query: 188 MTADAVKQVEEML 200 +T +A+ Q+ E L Sbjct: 229 ITKEAIIQLTESL 241 >UniRef50_B7FXM9 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FXM9_PHATR Length = 184 Score = 158 bits (401), Expect = 8e-38, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 21/178 (11%) Query: 44 RAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDH-SQKVNKKMY 101 KT +EV+GSG+K QKGTG AR+G + P +R G + D+ + K+NKK+ Sbjct: 4 AKTKTISEVSGSGRKIRNQKGTGMARAGHSRPPHFRGGAKAHGPKNVTDYGNTKLNKKVR 63 Query: 102 RGALKSILSELVRQDRLIVVEKFS-VEAPKTKLLAQKLKDMALED-----VLIITGELDE 155 + AL LS+ + + LI++ + + KTK L + L+ + LI+ + E Sbjct: 64 KLALVHALSQKLLEGNLIILNSLKELPSHKTKELTRFLEPWDIGGKDGATALILDAYISE 123 Query: 156 -------------NLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 NL++A+ N++++ V + ++ +K+V+T A++++E+ L Sbjct: 124 EEGQPQSYKGVPMNLWVASSNIYRIKVGNHLAACVYDILKHEKLVLTLAALEKLEDRL 181 >UniRef50_Q8KTP1 Ribosomal protein L4 n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTP1_TREPR Length = 198 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 96/191 (50%), Gaps = 6/191 (3%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 S+ + + G L+ QV+ AY A R Q++R EV+ S +KPWRQKG GRA Sbjct: 4 VSSPYCNRPSHGSHAGYPLLRQVLNAYHASLRPSCSTQRSRGEVSHSTRKPWRQKGLGRA 63 Query: 69 RSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 R+G SP+WR GG F +R ++NK+M R +L + RQ RL +V+ + Sbjct: 64 RAGMTSSPLWRGGGRAFPSRTAASRLVRINKRMARLSLHVQIVRAARQGRLAIVDALRIA 123 Query: 128 APKTKLLAQKLKDMALEDVLIITG--ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 KT+ L A +++ G EL N + AARN+ + + GI P + + Sbjct: 124 PSKTRELRC---ASAQPSTMVVVGKSELCYNAYRAARNVSGLSIVAQRGISPRAFHLSSR 180 Query: 186 VVMTADAVKQV 196 +VMT A + + Sbjct: 181 IVMTRKAAEDI 191 >UniRef50_C4PXU3 50S ribosomal protein L4, putative n=1 Tax=Schistosoma mansoni RepID=C4PXU3_SCHMA Length = 409 Score = 142 bits (359), Expect = 7e-33, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 92/251 (36%), Gaps = 63/251 (25%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVT-GSGKKPWRQKGTGRA 68 + + F LVH+ + A R TRAE++ G+ KKPW QKGTG+A Sbjct: 101 GMIDLHPDIFAVFPRIDLVHKNLYWQAHYRLIDWRCITTRAELSYGTRKKPWPQKGTGKA 160 Query: 69 RSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 R G+ ++ IW +GG R P+ ++ L S+LS Q +VVEK + E Sbjct: 161 RHGNRRTHIWLTGGQCKGPRGPESFYYLLSYGERLAGLLSMLSIKHAQVIFVVVEK-NNE 219 Query: 128 APKTKLLAQKLKDMALE--DVLIITGELD-------------------ENLFLAARNLH- 165 + + ++L D+ +L + +N+ + NL Sbjct: 220 L--SAIYIRQLADLRCWGPSILFVDAHSPASQLAVPCPGSENIDNNETDNMNFSYDNLAI 277 Query: 166 ------------------------------------KVDVRDATGIDPVSLIAFDKVVMT 189 + + ++ S++ D +V++ Sbjct: 278 SLACGSYENHVKSEISPESSAFKLDSIAPRATHPGRGLTLMPVHSLNVWSMVHHDTLVIS 337 Query: 190 ADAVKQVEEML 200 A++ +EE L Sbjct: 338 LKALEMLEERL 348 >UniRef50_Q6BKF7 DEHA2F22330p n=4 Tax=Saccharomycetales RepID=Q6BKF7_DEBHA Length = 255 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 18/216 (8%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + S + + F + VV A AR G+ T+ + S +K Q Sbjct: 37 FPSLEPHSFVPLPTQFFDAPLRRDFLWSAVVYEADRARVGSGYVITKGDKLYSNRKLHPQ 96 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI-- 119 KGTGRAR+G SPI + + P D S ++ K+Y A ++ LS+ R ++ Sbjct: 97 KGTGRARTGDANSPIRDNEVKAHGVKAPHDWSTRLPSKVYSKAFQTALSDQYRNGKVFII 156 Query: 120 ------------VVEKFSVEAPK-TKLLAQKLKDMALEDVLIITGELDENLFLAARNL-H 165 VV F + P+ T+ + D+ +L IT +NL + + Sbjct: 157 GGDKSATKASDDVVADFKYDHPEATRQFVE-AHDLDRLSLLFITDAQRDNLINSTEYVGK 215 Query: 166 KVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 K DV ++ ++ +++ + A A++ + Sbjct: 216 KADVLIKEAVEVRDILKANRIYIEAPALQWFIGKYS 251 >UniRef50_P51998 54S ribosomal protein YmL6, mitochondrial n=12 Tax=Saccharomycetaceae RepID=RL4P_YEAST Length = 286 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 87/224 (38%), Gaps = 30/224 (13%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + + + V +T ++ + VV R G R+E S +K Q Sbjct: 49 FPSLEPLTFVPVPTSTVAAPLRRDILWRAVVYENDNRRVGASNPPGRSENGFSRRKLMPQ 108 Query: 63 KGTGRARSGSIKSPIWRSGGVTFA-ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV 121 KG+GRAR G SP +GG A P D++ ++ K+Y A + LS + +L V+ Sbjct: 109 KGSGRARVGDANSPTRHNGGRALARTAPNDYTTELPSKVYSMAFNNALSHQYKSGKLFVI 168 Query: 122 --EKFSVEAPKTKLLAQKLK--------------------------DMALEDVLIITGEL 153 EK + +P +L +L + + +L IT + Sbjct: 169 GGEKVDLISPTPELDLNRLDLVNTNTVEGKEIFEGEVIFRKFLEEFQLKGKRLLFITDKT 228 Query: 154 DENLFLAARNLH-KVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 E L ++ KVDV ++ ++ V + +A++ + Sbjct: 229 REGLIKSSDPYKQKVDVIQKELVEVNDILRAQAVFIELEALEYL 272 >UniRef50_B9WJJ8 60S ribosomal (Large subunit) protein, mitochondrial, putative n=4 Tax=Saccharomycetales RepID=B9WJJ8_CANDC Length = 272 Score = 122 bits (306), Expect = 8e-27, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 85/223 (38%), Gaps = 29/223 (13%) Query: 2 ELVLKDAQSALTVSETTFGR--DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKP 59 E + ++ + + F ++ V A AR G+ +++ S +K Sbjct: 45 EFPSLEPKTFIPLPTNFFNTEKPIRRDILWSCVTYEADKARVGSNYVILKSDSPYSNRKL 104 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRL 118 QKG+GRAR G SP + A + P D S + K+Y +++ + +Q L Sbjct: 105 RPQKGSGRARLGDANSPHMDNEIKAHAIKGPHDWSTDLPSKIYSRGIQNAFTMHYKQGNL 164 Query: 119 IVVEK-FSVE---APKTKLLAQKLKDMALEDVLIITGELDENLFLAARN----------- 163 +VE + + T+ + ++ ++L IT E +NL + + Sbjct: 165 NIVENELNFQYGYDIITQSFVS-IHNLNKLNLLFITNEPRDNLMESIKQFYINDKEFNSL 223 Query: 164 --------LHKV--DVRDATGIDPVSLIAFDKVVMTADAVKQV 196 L K+ V ++ ++ +V + + A++ Sbjct: 224 NKKEKPKYLQKLKGKVLTKEDVEVRDILRAHRVFIESSALQWF 266 >UniRef50_C4R1R6 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4R1R6_PICPG Length = 261 Score = 118 bits (297), Expect = 9e-26, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 86/220 (39%), Gaps = 21/220 (9%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + + L +S L+ + VV R G R E S +K Q Sbjct: 41 FPSLEPHTVLPISTEFLNSPLRRDLLWKAVVMEFDNIRVGASNPPGRGEHKFSRRKLRPQ 100 Query: 63 KGTGRARSGSIKSPIWRSGGVTFA-ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV 121 KG+GRAR G SP +G A P D S + K+Y A + LS + L ++ Sbjct: 101 KGSGRARVGDANSPTRHNGARALARNAPNDFSTDLPFKVYARAYRIALSSFYIKGHLHII 160 Query: 122 ------------EKFSVEAPKTK----LLAQKLKDMALEDVLIITGELD--ENLFLA--A 161 ++ +E K + Q + ++ ++L I+ L+ +NL A A Sbjct: 161 GGCSSLIPFNRGDQNILELSTDKKEALEIFQAIHNLKGLNILFISDSLNNSQNLNKAIQA 220 Query: 162 RNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 N ++ + D ++ L+ ++V + +++ + A Sbjct: 221 LNDDQISLLDKENVEVRHLLKANRVFIDQASLQFFAKEFA 260 >UniRef50_Q6C573 YALI0E20493p n=1 Tax=Yarrowia lipolytica RepID=Q6C573_YARLI Length = 271 Score = 112 bits (281), Expect = 6e-24, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 12/210 (5%) Query: 2 ELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWR 61 + + V+ G ++ L+ + VV A R G R ++ S +K + Sbjct: 49 QFPSLEPTRLQPVTSQMLGAQVHKDLLWRAVVYEADRQRVGASNPPGREQMGYSTRKLHK 108 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFA-ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 QKG G+AR G SP GG P + + K++Y A+++ L+ ++ RL V Sbjct: 109 QKGMGKARVGDAGSPTRTQGGFALDRNAPNKMATGLPKQVYASAIRAALTSQYQEGRLFV 168 Query: 121 VEKF-----SVEAPKT---KLLAQKLKDMALEDVLIITGELDENL--FLAARNLHKVDVR 170 V+ SV+ T + L +L E + + L L NL D+ Sbjct: 169 VDGPCELPESVKDNTTFGQQWLQGELGFGKKEMTVFLVDTERPILDSVLGKDNLK-ADIV 227 Query: 171 DATGIDPVSLIAFDKVVMTADAVKQVEEML 200 I+ ++ VV+ D +K + Sbjct: 228 PKEFIEVRDILKARNVVVEYDVLKWLAAKY 257 >UniRef50_B5JYE1 Ribosomal protein L4/L1 family (Fragment) n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JYE1_9GAMM Length = 101 Score = 111 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 61/100 (61%), Positives = 78/100 (78%) Query: 101 YRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA 160 YRGA+ SI SELVRQ+RL+VVE +V+APKTK L KLK+M LE VL+++ D NL+LA Sbjct: 1 YRGAMASIFSELVRQERLVVVEDITVDAPKTKQLVGKLKEMELESVLLVSETDDINLYLA 60 Query: 161 ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 ARNL+ VDV D G+ PV LI FDKV++T D++K+VEE L Sbjct: 61 ARNLNSVDVTDVAGLSPVDLIRFDKVLITVDSLKRVEEQL 100 >UniRef50_C8N6G3 50S ribosomal protein L4 n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6G3_9GAMM Length = 103 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 1/103 (0%) Query: 100 MYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLF 158 MYR AL+SI SEL RQDRL +VE+ + + KTK +M +D L+IT L+ENLF Sbjct: 1 MYRAALRSIFSELQRQDRLCLVEELNFSSNKTKDFVSYAAEMGFGQDFLLITESLNENLF 60 Query: 159 LAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 LA+RN+ V V D IDPV L+ +KV + A++++ E L+ Sbjct: 61 LASRNIPSVVVVDVEAIDPVLLLRHEKVAIDKLAIERINEWLS 103 >UniRef50_UPI0001923E1E PREDICTED: hypothetical protein n=2 Tax=Hydra magnipapillata RepID=UPI0001923E1E Length = 426 Score = 98.3 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 2/123 (1%) Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKL 138 GGV+ +P+D+S ++ K+ R L++ LS Q L VVE ++ + + Sbjct: 246 YKGGVSGGPKPKDYSYELPFKVRRMGLRTALSCKFAQGDLTVVEDYNN--LTETNFSDAV 303 Query: 139 KDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 ++L+ L + G ++ L K+D + A + ++ K+V++ AV+ +EE Sbjct: 304 TSLSLQSSLFVDGFENDYLDSLVSGFEKIDFKPALLLHVYGMLIRSKLVLSLQAVRILEE 363 Query: 199 MLA 201 L Sbjct: 364 KLC 366 >UniRef50_C6UN10 Putative 50S ribosomal subunit protein L4 n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN10_HODCD Length = 187 Score = 97.1 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 15/181 (8%) Query: 20 GRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWR 79 G + +V Y R KTRA+V+ S +K ++QKGTG AR + +R Sbjct: 12 GFEPRLDVVSAAWRWYTNKRRWHVAQIKTRADVSCSRRKLFKQKGTGGARHSTRAVCQFR 71 Query: 80 SGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLK 139 GG F AR + K+NK++ AL+S L+ + L VE + + L Sbjct: 72 GGGK-FCARRTLLTPKLNKRVKTLALRSALALKLAAGELKFVEGLAAAKLTP---SSFLV 127 Query: 140 DMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 ++ AA V + + SL+A V++T A + + Sbjct: 128 HACPRSAAVVG-------LRAA----GVANAHWSKLCARSLLATSAVIVTKRAFLALAQK 176 Query: 200 L 200 L Sbjct: 177 L 177 >UniRef50_B8KWG3 Ribosomal protein L4/L1e n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KWG3_9GAMM Length = 86 Score = 96.0 bits (238), Expect = 7e-19, Method: Composition-based stats. Identities = 49/77 (63%), Positives = 65/77 (84%) Query: 125 SVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 +E PKTKLLA++LK LE+VLII+ E+D+NL+LA+RNLH+VDV D G++PVSL+AFD Sbjct: 10 DLEQPKTKLLAEQLKGFGLENVLIISSEVDKNLYLASRNLHRVDVSDVEGVNPVSLVAFD 69 Query: 185 KVVMTADAVKQVEEMLA 201 KV++T DAVK+ EE LA Sbjct: 70 KVLVTVDAVKKFEEALA 86 >UniRef50_D2MKV5 Ribosomal protein L4/L1e n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKV5_9BACT Length = 98 Score = 92.9 bits (230), Expect = 6e-18, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 105 LKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED-VLIITGELDENLFLAARN 163 ++S LS + L+V+ S+ PKTKL+A+ +K + VL + G + +F A RN Sbjct: 1 MQSALSSKMAAGELLVLADLSLPEPKTKLMAKAVKQLGATGPVLFVVGRDHDAVFRATRN 60 Query: 164 LHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 L +V + ++ + +V+ D + V+E+ A Sbjct: 61 LAQVKAVPPEELTVYDVLRYQTLVVLKDELPNVQELWA 98 >UniRef50_UPI0001BCDE73 50S ribosomal protein L4 n=1 Tax=Campylobacter fetus subsp. venerealis str. Azul-94 RepID=UPI0001BCDE73 Length = 119 Score = 85.2 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 1/112 (0%) Query: 86 AARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE 144 + + + QK NKK R AL+ L++ +L V+ + + KTK + + Sbjct: 4 GPKNNRHYDQKANKKQKRLALEFALNDKGANGKLYAVDNIQISSGKTKDAISISNKLGVR 63 Query: 145 DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 D LII ELD LA +NL V DA+ ++ + + V+ A++ + Sbjct: 64 DALIIKNELDAKTLLAIKNLANCYVIDASEVNAYLVSVYSAVIAEKAALQSI 115 >UniRef50_D2RE65 Ribosomal protein L4/L1e n=2 Tax=Archaea RepID=D2RE65_ARCPR Length = 252 Score = 82.9 bits (204), Expect = 6e-15, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 87/257 (33%), Gaps = 71/257 (27%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ--GT---RAQKTRAEVTGSGKK 58 + + + + F +F ++ + V+A + RQ GT E G Sbjct: 8 LKGEIVEEIELP-KVFETEFRPDIIKRAVLAIQSHRRQPYGTNPLAGVDYAWENWGP--- 63 Query: 59 PWRQKGTGRARS-----GSIK--SPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILS 110 G G AR GS P G + + ++K+NKK R AL S ++ Sbjct: 64 -----GYGYARVPRWKIGSRAVVVPQAVGGRRAHPPKVQKKWAEKINKKEKRKALMSAIA 118 Query: 111 ELVR-----------QDRL--IVVEKFSVEAPKTKLLAQKLKDMAL-------------- 143 + L IVV+ KTK +A+ K + + Sbjct: 119 ATANPELVKARNHVFEGELPKIVVDDIE-SIKKTKEVAEIFKAIGVYADVERAKETKRVR 177 Query: 144 --------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV--- 186 VL++ G+ D+ + AA+NL VD ++ L+A V Sbjct: 178 AGKGKMRGRRYVMKRSVLLVVGK-DDGVIKAAKNLPGVDAVLVKDLNV-ELLAPGCVAGR 235 Query: 187 --VMTADAVKQVEEMLA 201 V T A++ + L Sbjct: 236 LTVWTKSAIEYLRGWLC 252 >UniRef50_D1ZWQ9 Whole genome shotgun sequence assembly, contig_1528 n=2 Tax=cellular organisms RepID=D1ZWQ9_SORMA Length = 180 Score = 80.9 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Query: 107 SILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDV-LIITGELDENLF-LAARNL 164 LS + L+V++ +VE KT++L L + L+I G+ EN F LAARNL Sbjct: 1 MALSSHAKAGSLVVLDGLTVENGKTQVLLGNLAKLGFGKTSLVIDGDAVENTFALAARNL 60 Query: 165 HKVDVRDATGIDPVSLIAFDKVVMT 189 +V+V A G + ++ D + + Sbjct: 61 RQVNVLPAGGANVYDILKHDTLAID 85 >UniRef50_P60847 50S ribosomal protein L4P n=1 Tax=Nanoarchaeum equitans RepID=RL4_NANEQ Length = 268 Score = 77.1 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 95/267 (35%), Gaps = 71/267 (26%) Query: 1 MELVLKDAQ----SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQ----KTRAEV 52 ME+ L + Q + + F ++ + +A + RQ A K + Sbjct: 1 MEVPLYNLQASQVGNIELPPQ-FNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAW 59 Query: 53 TGSGKKPWRQK-GTG-----RA---RSGS------IKSPIWRSGGVTFAARP-QDHSQKV 96 T ++ WR G G RA R G+ G + +D +K+ Sbjct: 60 TSKRRRSWRTSYGRGISRVSRAILRRHGALFYWVARNIAQAVKGKKAHPPKAEKDWYEKI 119 Query: 97 NKKMYRGALKSILSE-------LVRQDRL-----IVVEKFSVEAPKTKLLAQKLKDMAL- 143 NKK R A++S L+ R + IVV+ + KTK + Q L + L Sbjct: 120 NKKERRLAIRSALAATKELDLVKARGHIIDKPVPIVVDGLE-QLRKTKEIQQLLLKLGLE 178 Query: 144 --------------------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 + LI+ + +E LF A N+ +D+ + ++ Sbjct: 179 KELERVYEIKRRAGKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNV 238 Query: 178 VSLIA-----FDKVVMTADAVKQVEEM 199 L+A ++++ DA++ + E Sbjct: 239 -ELLAPGAKPGRLLIISKDALETLRER 264 >UniRef50_Q2NFV7 50S ribosomal protein L4P n=23 Tax=Euryarchaeota RepID=RL4_METST Length = 259 Score = 75.2 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 63/253 (24%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ--GT---RAQKTRAEVTGSGKK 58 + D + + E F ++ ++ + V++ Q GT ++T AE GSG+ Sbjct: 9 LKGDITEEIELPE-IFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRG 67 Query: 59 PW---RQKGTGRARSGSIKSPIWRSGGVTFAARPQD-HSQKVNKKMYRGALKSILSELVR 114 R KG+ +A P G R + +K+NKK A++S ++ Sbjct: 68 AAMVPRVKGSSKA----AFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRSAIAATAN 123 Query: 115 QDRL--------------IVVEKFSVEAPKTKLLAQKLKDMAL----------------- 143 ++ + V++ TK + KD+ + Sbjct: 124 KELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGK 183 Query: 144 -----------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI----AFDKVVM 188 + L++ G D + L ARN VDV + I+ L+ ++ + Sbjct: 184 GKLRGRKYRTPKGPLVVVGN-DRGISLGARNHAGVDVVEVNNINA-ELLAPGTHAGRLTI 241 Query: 189 -TADAVKQVEEML 200 T A++++ ++ Sbjct: 242 YTKSAIEKLGDLF 254 >UniRef50_Q8TY91 50S ribosomal protein L4P n=2 Tax=Archaea RepID=RL4_METKA Length = 260 Score = 74.4 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 96/266 (36%), Gaps = 72/266 (27%) Query: 1 MELVLKDAQSA----LTVSETTFGRDFNEALVHQVVVAYAAGARQ--GT---RAQKTRAE 51 ME + + + + + F + L+ + V+A A RQ GT +T AE Sbjct: 1 MEAPVFNLEGEEVDTVELPSF-FEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAE 59 Query: 52 VTGSGK--------KPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYR 102 G+G K R GRA + G A P +D +Q+VN+K R Sbjct: 60 SWGAGHGVAMVPRVKGRRHPAAGRA----ARVAQAVGGQKAHAPTPEKDWTQRVNRKERR 115 Query: 103 GALKSILSELVRQD---------------RLIVVEKFSVEAPKTKLLAQKLKDMAL---- 143 AL+S L+ + + ++VV++ K + + + K + L Sbjct: 116 AALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELK-SLNKAREVREFFKSVGLWADV 174 Query: 144 ------------------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 + VLI+ E DE + L ARN VDV +A + Sbjct: 175 ERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDE-DEGIKLGARNHPGVDVVEAMHLGVEH 233 Query: 180 L----IAFDKVVMTADAVKQVEEMLA 201 L V T A++ +EE L Sbjct: 234 LAPGAHPGRLTVFTPGALEVLEERLG 259 >UniRef50_Q673S8 Ribosomal protein L4 n=7 Tax=environmental samples RepID=Q673S8_9EURY Length = 304 Score = 72.9 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 91/261 (34%), Gaps = 75/261 (28%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQG----TRAQKTRAEVTGSGKKPWRQKGT 65 A+T+ + F + E L+ + V+A A RQ K + + W KG Sbjct: 46 KAVTLPD-VFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWWGKGR 104 Query: 66 GRAR----SGSI---KSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDR 117 G +R +G ++P R G + +D SQK+N K R A S ++ + Sbjct: 105 GVSRIMRKAGQRTAAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSAIAASASSNL 164 Query: 118 L--------------IVVE-----------KFSVEAP----KTKLLAQKLKDMAL----- 143 + I+++ K+ +E+ T+ ++ + L Sbjct: 165 VSERGHHFEASLRFPIIIDGYVESREGGDEKYDLESLPLQYSTRKFVAMMEGLGLGADLD 224 Query: 144 -----------------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 + +L++ + + L AARN+ VD+ A + L Sbjct: 225 RARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTN-GLAKAARNIPGVDIVVAKDLSAEDL 283 Query: 181 I---AFDKV-VMTADAVKQVE 197 ++ V T A+ +E Sbjct: 284 APGGDAGRLTVWTKAAIGALE 304 >UniRef50_A0B9W9 50S ribosomal protein L4P n=8 Tax=Euryarchaeota RepID=RL4_METTP Length = 251 Score = 72.9 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 89/246 (36%), Gaps = 57/246 (23%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ--GTR-----AQKTRAEVTGSGKKP 59 + + + F ++ L+ + V+A A Q G R+ G G Sbjct: 11 NPVGEIVLP-AIFDEEYRPDLIKRAVLAAQANRLQPYGPHFYAGMNTSARSWGPGHGVSR 69 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVR---- 114 + TGR R+ ++ P+ R G + P + S+K+N+K A++S ++ + Sbjct: 70 VPRIVTGR-RAAAV--PMARGGRASHPPVPSKVLSEKINEKERIKAIRSAVAATAKPDIV 126 Query: 115 -------QDRLIVVEKFSVEAP-KTKLLAQKLKDMALED--------------------- 145 L +V + +E+ KT L + L L D Sbjct: 127 AARGHLFSGELPIVVRGEIESISKTSELRRFLMAAGLWDDVMRAKNGRKVRAGKGKIRGR 186 Query: 146 ------VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK-----VVMTADAVK 194 ++I D + AARNL VD A ++ L+A V + ++K Sbjct: 187 RFRQPRSILIVAAADNGIGRAARNLPGVDFVTADRLNA-ELLAPGTHAGRLTVWSEPSLK 245 Query: 195 QVEEML 200 +EE L Sbjct: 246 VLEERL 251 >UniRef50_Q05FI6 Ribosomal protein L4 n=4 Tax=Candidatus Carsonella ruddii RepID=Q05FI6_CARRP Length = 172 Score = 72.5 bits (177), Expect = 7e-12, Method: Composition-based stats. Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%) Query: 49 RAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSI 108 R V GSGKKPW QKGTGRAR+G KSPIWRSGGVTF+ ++ K KK + L ++ Sbjct: 43 RRLVFGSGKKPWIQKGTGRARAGDKKSPIWRSGGVTFS----NYLFKKKKKKQKNVLINL 98 Query: 109 LSELVRQDRLIVVE 122 ++ L+ +++ + + Sbjct: 99 INLLIYSNKIFIFD 112 >UniRef50_Q4UES5 60S ribosomal subunit protein L4/L1, putative n=2 Tax=Theileria RepID=Q4UES5_THEAN Length = 426 Score = 71.3 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 78/233 (33%), Gaps = 49/233 (21%) Query: 13 TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQK-----TRAEVTGSGKKPWRQ---KG 64 T+ F LVH V + RQ + T A G+G+ R KG Sbjct: 21 TIMPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKG 80 Query: 65 TGRARSGSIKSPIW-RSGGVTFAARP-QDHSQKVNKKMYRGALKS----------ILSEL 112 G RSG + R+GG+ R + +K+N K R AL ++S Sbjct: 81 GGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRG 140 Query: 113 VRQDRL----IVVEKFSVEAPKTKLLAQKLKDMALED---------------------VL 147 R + + +V++ KT+ + L M L D L Sbjct: 141 HRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKRKGKKRPVGPL 200 Query: 148 IITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMTADAVKQV 196 ++ A RN+ VDV ++ + L V+ + A + + Sbjct: 201 VVMRSTAVEGKRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIFSKSAFELL 253 >UniRef50_Q9MTE6 Ribosomal protein L4 n=1 Tax=Toxoplasma gondii RepID=Q9MTE6_TOXGO Length = 211 Score = 70.5 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Query: 44 RAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRG 103 K +A + S KK +QKG+G+AR GS KS + + G V F + + + KK Sbjct: 61 SNTKNKAFSSYSNKKLRQQKGSGKARIGSKKSVLQKGGSVAFGLNLKRYFNPLIKKTLFL 120 Query: 104 ALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQK---LKDMALEDVLIITGELDENLF-L 159 LK + +I + F+ + K + L + + +L + + ++ Sbjct: 121 ILKYLCLNKRTNIYIININTFNKYSVNFKDYLKLQVQLNGILIHKLLCLNLTKNNLVYFK 180 Query: 160 AARNLHKVDVRDATGIDPVSLIAFDKVVM 188 + +++ + + + L++F + + Sbjct: 181 FTKQGKQINFLKSNKLTCLKLLSFKYIFI 209 >UniRef50_Q7YN80 Ribosomal protein L4 n=1 Tax=Eimeria tenella RepID=Q7YN80_EIMTE Length = 213 Score = 69.0 bits (168), Expect = 8e-11, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 7/148 (4%) Query: 44 RAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRG 103 + ++ S KKPW+QKG G ARSGS KSP+W+ G F + + + K + Sbjct: 68 SNTINKNNLSKSTKKPWKQKGLGMARSGSFKSPLWKGGIKLFGPKNRIINIIFQIKKKKL 127 Query: 104 ALKSILSELVRQDRLIVVEKFSVEAPKTKLLA---QKLKDMALEDVLIITGELDENLFLA 160 +L +++ K +++K + ++ I + N+ Sbjct: 128 NFFYLLLNKRTYISFTSYNAYNIYFNNFKEYLNKQKRIKGIFSNKIIYILLNNNINIKK- 186 Query: 161 ARNLHKVDVRDATGIDPVSLIAFDKVVM 188 + + ++ +S + F+ ++ Sbjct: 187 ---TNYPFILSIKSLNIISFLKFNYIIF 211 >UniRef50_Q4DUP9 Putative uncharacterized protein n=6 Tax=Trypanosomatidae RepID=Q4DUP9_TRYCR Length = 459 Score = 67.5 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 80/251 (31%), Gaps = 59/251 (23%) Query: 3 LVLKDAQSAL----TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVT---GS 55 + + + + + + FG + + + + R A K E Sbjct: 115 VPVFNLNNEVTHTRELDPFVFGMYPETEELSKNLTYWL--VRCQNYASKWDYETREIWRK 172 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNK---KMYRGALKSILSEL 112 KK W G G R + K+ + GG T ++P + + K + + + +L+ Sbjct: 173 AKKNWPNTGMGMPRVSNRKNHQYLWGGRTKPSKP--WNMLMPTMDVKTWSKSNRMMLTLK 230 Query: 113 VRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE---------------------------- 144 + Q RL VVE+ ++ P + + M+ + Sbjct: 231 MLQGRLQVVERLTLSEPTQECYLGLCRTMSWDVRHTGGGVLFMDGGSRITPSIEFDRSFF 290 Query: 145 -------------DVLIITGELDENLFLAARNLHK----VDVRDATGIDPVSLIAFDKVV 187 L+ + D N + + + + + + +++V Sbjct: 291 FGSFFNGRNKVVRPTLLCDEQYDYNKTASKQRMKGPKGPKNPIPINRFNVFDAMQHERLV 350 Query: 188 MTADAVKQVEE 198 +T A+ Q+EE Sbjct: 351 ITEGAIMQLEE 361 >UniRef50_B5IFI8 Ribosomal protein L4/L1 family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFI8_9EURY Length = 254 Score = 67.1 bits (163), Expect = 3e-10, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 77/253 (30%), Gaps = 71/253 (28%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQG-----TRAQKTRAEVTGSGK---K 58 + + +T+ F + L+ + V + Q T + AE G G K Sbjct: 11 EVKRQITLP-KVFNYPYRPDLIKEAVRIFQLNRVQPHGVSPTAGMRRVAESWGPGHGISK 69 Query: 59 PWRQKGTGRARSGSIKS----PIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELV 113 R G P G + +K+N KM R A S LS + Sbjct: 70 MVP-------RVGHTSRGAIIPSTVGGRAGHPPTTQKVWKRKMNIKMRRLAKYSALS--M 120 Query: 114 RQDRL----------------IVVEKFSVEAPKTKLLAQKLKDMAL-------------- 143 +++ +VVE K + L+++ + Sbjct: 121 TSNKVMVAKRGHKFSPDITLPVVVEDEFENISTVKEAIRVLQNLGIYEDIIRASEKRIRG 180 Query: 144 -------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI---AFDKV- 186 + VLI+ D N+ RNL VD+ ++ L ++ Sbjct: 181 GKGKRRGRRYKKKKSVLIVVSNKD-NVLKGFRNLPGVDIVTPRELNAEVLAPGTHAGRLA 239 Query: 187 VMTADAVKQVEEM 199 + T A+K++ Sbjct: 240 IFTESAIKEIRRW 252 >UniRef50_Q9HIR0 50S ribosomal protein L4P n=3 Tax=Thermoplasmatales RepID=RL4_THEAC Length = 255 Score = 66.3 bits (161), Expect = 6e-10, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 81/249 (32%), Gaps = 64/249 (25%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ--GTRAQKTRAEVTGSGKKPWRQKG 64 + + + + E F + E ++ + A + RQ G+ V + + G Sbjct: 13 EMKGEIDLPE-VFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTR-----PG 66 Query: 65 TGRARS-----GSIKSPI--WRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQD 116 G +R GS I G + R ++ K+N + + A S ++ + Sbjct: 67 LGISRMPRIAGGSRVVGIASAVGGKSAHSPRTTKNLYVKINDRERKMAKYSAIALTASVE 126 Query: 117 RL--------------IVVEKFSVEAPKTKLLAQKLKDMAL------------------- 143 + IVVE KTK LK++ + Sbjct: 127 AVKKRGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGK 186 Query: 144 ---------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL----IAFDKVVMTA 190 + VLI+ + + A R+L VD+ + L + + T Sbjct: 187 MRGRRYKQPKSVLIVA--RNSSAMKAFRSLPGVDIASPNSLSIRKLAPGGVGGRLTIFTE 244 Query: 191 DAVKQVEEM 199 A++ ++E+ Sbjct: 245 GAIESLKEV 253 >UniRef50_B0R657 50S ribosomal protein L4P n=8 Tax=Halobacteriaceae RepID=RL4_HALS3 Length = 250 Score = 64.4 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 83/257 (32%), Gaps = 65/257 (25%) Query: 1 MELVLKD----AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ-----GTRAQKTRAE 51 M++ ++D L + F LV + V+A A Q +T AE Sbjct: 1 MQVTVRDLDGDDAGTLDLPR-VFEEPVRPDLVKRAVLAAQANRTQEYGADEYAGLRTTAE 59 Query: 52 VTGSGKKP-WRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYR-----GA 104 GSG+ K G G + P G + +DH VN K + Sbjct: 60 SQGSGRGMAHVPKANG---QG-ARVPQTVGGRKAHPPKAEKDHGLDVNDKERKAAVRAAV 115 Query: 105 LKSILSELVRQDR----------LIVVEKFSVEAPKTKLLAQKLKDMAL----------- 143 + SELV L+V + F + KT+ + L+ + + Sbjct: 116 AATTDSELVADRGHNFDDDVEFPLVVSDDFE-DLVKTQDVVSLLEALGVHADIERADEGR 174 Query: 144 -----------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL---IAF 183 +L +T AARNL VDV ++ L Sbjct: 175 TVRAGQGTLRGRKYQEPTSILFVTASES-GPSTAARNLAGVDVATGREVNAEDLAPGAEP 233 Query: 184 DKV-VMTADAVKQVEEM 199 ++ V T AV++V + Sbjct: 234 GRLTVWTESAVEEVAQR 250 >UniRef50_A8TE32 Ribosomal protein L4/L1e n=1 Tax=Methanococcus voltae A3 RepID=A8TE32_METVO Length = 253 Score = 64.4 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 83/246 (33%), Gaps = 60/246 (24%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + + + + F ++ L+ + V++ Q + + K KG GRA Sbjct: 13 KGEVAIP-SVFSAEYRPDLIKRAVISSLTAKLQPKGSNLLAG--HRTSAKSIG-KGHGRA 68 Query: 69 RS------GSIKSPIWRSGGVTFAARPQD-HSQKVNKKMYRGALKSILSELVRQD----- 116 R G P G + + +++N+K AL+S ++ + Sbjct: 69 RVRRTAQGGGAFVPQAVGGRRAHGPKVEKILLERINRKERLKALQSAIAASANVEIVKAR 128 Query: 117 ----------RLIVVEKFSVEAPKTKLLAQKLKDMALE---------------------- 144 LIV E+F KTK K + L+ Sbjct: 129 GHIIPDVPALPLIVSEEFE-SIVKTKDALDVFKALKLDADLTRAKEGISIKAGKGKLRGR 187 Query: 145 ------DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI---AFDKVVM-TADAVK 194 VL++ + + + A++N+ VDV A + + + A ++ + T A++ Sbjct: 188 KYKKPRSVLVVVSKACDAV-KASKNIAGVDVITADDLGTMHIAPGTAAGRLTLWTEGAIE 246 Query: 195 QVEEML 200 + E Sbjct: 247 ALREKF 252 >UniRef50_P09180 60S ribosomal protein L4 n=185 Tax=Eukaryota RepID=RL4_DROME Length = 401 Score = 62.8 bits (152), Expect = 6e-09, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 81/241 (33%), Gaps = 55/241 (22%) Query: 16 ETTFGRDFNEALVHQVVVAYAAGARQGTRAQ-----KTRAEVTGSGK---KPWRQKGTGR 67 F +V++V RQ +T AE G+G+ + R +G G Sbjct: 28 PAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGT 87 Query: 68 ARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSE----LVRQDRLIVV 121 RSG GG FA + +KVN R AL S ++ + Q + V+ Sbjct: 88 HRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVI 147 Query: 122 EKFS----------VEAPKTKLLAQKLKDMA----LEDVL-------------------- 147 + S + KTK L+ + ++ V Sbjct: 148 DGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIAR 207 Query: 148 ---IITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMTADAVKQVEEML 200 ++ + DE L A RN+ ++ + ++ + L V+ T A ++ ++ Sbjct: 208 RGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLF 267 Query: 201 A 201 Sbjct: 268 G 268 >UniRef50_C5Y5B1 Putative uncharacterized protein Sb05g022750 n=1 Tax=Sorghum bicolor RepID=C5Y5B1_SORBI Length = 64 Score = 62.1 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 29/98 (29%), Gaps = 36/98 (36%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + + F + +VH V GT K E Sbjct: 1 MVLDDDVFDVPIRKDIVHWV----------GTHLTKAIGE-------------------- 30 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSIL 109 + G +P+ H+ K+ KK+ R LK L Sbjct: 31 ------FHGGATIHGPKPRIHAIKLQKKVRRLGLKIAL 62 >UniRef50_B0ETG0 60S ribosomal protein L4, putative n=6 Tax=Entamoeba RepID=B0ETG0_ENTDI Length = 431 Score = 60.5 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 77/243 (31%), Gaps = 57/243 (23%) Query: 16 ETTFGRDFNEALVHQVVVAYAAGARQ----GTRAQKTRAEVT-GSGK---KPWRQKGTGR 67 F +VH V + RQ T A K + ++ G+G+ + R G+G Sbjct: 25 PAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTEAGKQHSAISWGTGRAVARIPRISGSGS 84 Query: 68 ARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSELVRQDRL------- 118 R+G G F+ + +K K+M R A+ S ++ + Sbjct: 85 GRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHI 144 Query: 119 -------IVVEKFSVEAP-KTKLLAQKLKDMAL--------------------------- 143 +VV S+ KTK LK + Sbjct: 145 AGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIKE 204 Query: 144 -EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL----IAFDKVVMTADAVKQVEE 198 + L++ G D A RN+ VD + ++L ++ T A K++ Sbjct: 205 RKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHMGRFIIWTESAFKKLNT 264 Query: 199 MLA 201 + Sbjct: 265 IFG 267 >UniRef50_UPI0000E47D01 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E47D01 Length = 89 Score = 59.4 bits (143), Expect = 7e-08, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 24/48 (50%) Query: 153 LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 + N A + +V A G++ S++ +V+T DAV +E+ L Sbjct: 1 MPLNFLEAVNGIKTFNVLSAEGLNVYSMLKHKTLVLTLDAVNLLEQRL 48 >UniRef50_Q8I431 60S ribosomal protein L4, putative n=7 Tax=Eukaryota RepID=Q8I431_PLAF7 Length = 411 Score = 59.4 bits (143), Expect = 7e-08, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 81/252 (32%), Gaps = 58/252 (23%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQK-----TRAEVTGSGK--- 57 K+ + + F L+ V + R + T AE G+G+ Sbjct: 16 KNVVGEVEIP-VVFQTPIRNDLIQSVYTNMSKNRRHPYAVKLGAGYETSAESWGTGRAVA 74 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSE---- 111 + R G G R+G GG F + +KVN K R A+ S ++ Sbjct: 75 RIPRVPGGGTHRAGQGAFGNMCRGGGMFNPTKIWRRWGRKVNLKEKRYAVCSSIAASGVT 134 Query: 112 -----------LVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVL------------- 147 +++ L+V KTK L + L+D + Sbjct: 135 SLVLARGHRISHLKEVPLVVSNDIE-SLSKTKEAVNFLVSLGLKDEVNRLVKSKKIRAGK 193 Query: 148 --------------IITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV----VMT 189 +I E D + A RN+ VD+ T ++ + L + + + Sbjct: 194 GKMRNRKYKIRNGPLIIYENDNGVKKAFRNIPGVDLCKVTKLNLLKLAPGGSIGRLCIWS 253 Query: 190 ADAVKQVEEMLA 201 A K+++ + Sbjct: 254 ESAFKKLDVIYG 265 >UniRef50_Q5BZ19 SJCHGC04542 protein (Fragment) n=2 Tax=Schistosoma japonicum RepID=Q5BZ19_SCHJA Length = 167 Score = 57.1 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVT-GSGKKPWRQKG 64 + + F LVH+ + A R TRAE+ G+ KKPW QK Sbjct: 96 VGMVDLHPDIFAVFPRIDLVHKNLYWQAHYRLIDWRCITTRAELPYGTRKKPWPQKK 152 >UniRef50_A6VHD3 50S ribosomal protein L4P n=18 Tax=Archaea RepID=RL4_METM7 Length = 252 Score = 56.7 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 81/247 (32%), Gaps = 62/247 (25%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + + + F ++ L+ + V++ Q S K KG G+A Sbjct: 13 KGDIELP-AVFETEYRPDLIKRAVISSLTAKLQPKGCDAFAG-YRTSAKSIG--KGHGKA 68 Query: 69 RSGSIKS--------PIWRSGGVTFAARPQD-HSQKVNKKMYRGA------------LKS 107 R ++ P G + + +++N+K A + S Sbjct: 69 RV--RRTAQGAGAFVPQAVGGRRAHPPKVEKILFERINRKEKLKALASAIAASAIPEIVS 126 Query: 108 ILSELVR-QDRLIVVEKFSVEAP-KTKLLAQKLKDMAL---------------------- 143 + L +V E+ KTK + + K + L Sbjct: 127 ARGHKIEGVPSLPLVVNADFESLAKTKEVLEVFKTLKLDADLARAKDGIKIKAGRAKLRG 186 Query: 144 ------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL----IAFDKVVMTADAV 193 + VL++ G+ E + A+RNL VDV A + + + +A + T +A+ Sbjct: 187 RKYKKPKSVLVVVGDACEAIA-ASRNLAGVDVITANDLSAIHIAPGTMAGRLTLWTENAI 245 Query: 194 KQVEEML 200 +++ Sbjct: 246 EKINGRF 252 >UniRef50_Q4Y0D5 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium chabaudi RepID=Q4Y0D5_PLACH Length = 127 Score = 56.7 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 37/82 (45%) Query: 31 VVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQ 90 ++ Y + + K R+ + S KK QKGTG+AR ++ S + + G TF + Sbjct: 45 IIKYYYLNSIYRYKNTKNRSLINFSKKKIRVQKGTGKARLKTLSSTVCKQGACTFGPFYK 104 Query: 91 DHSQKVNKKMYRGALKSILSEL 112 K NK +Y+ +L Sbjct: 105 SKIIKYNKFIYKLIFIYLLINK 126 >UniRef50_Q9YFM1 50S ribosomal protein L4P n=7 Tax=Thermoprotei RepID=RL4_AERPE Length = 272 Score = 56.3 bits (135), Expect = 5e-07, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 81/247 (32%), Gaps = 60/247 (24%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK-GTGR 67 + ++ + + F + L+ + ++ Q K R + G G G Sbjct: 26 KDSVVLPQ-IFRFPVRKDLIRRAFLSEFTARLQ----PKGRDPMAGKRTSAVSLGVGRGV 80 Query: 68 ARS----GSIKSPIW---RSGGVTFAARPQDHSQK-VNKKMYRGALKSILSELVRQDRL- 118 AR GS+++ + R G R + ++ +NKK R A S +S R+D + Sbjct: 81 ARVPRIKGSLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATISAISATSREDLVR 140 Query: 119 ------------IVVEKFSVEAPKT-KLLAQKLKDMAL---------------------- 143 IV++ + T + L+ + + Sbjct: 141 QRGHRFSAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRG 200 Query: 144 ------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMTADAV 193 + VL + + L LA + + VDV T + + L + T +A+ Sbjct: 201 RRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLLSVLHLAPGGHPGRLTIYTTEAL 260 Query: 194 KQVEEML 200 K + Sbjct: 261 KLLSRRF 267 >UniRef50_Q8SRC2 60S RIBOSOMAL PROTEIN L4 n=12 Tax=Apansporoblastina RepID=Q8SRC2_ENCCU Length = 335 Score = 55.9 bits (134), Expect = 7e-07, Method: Composition-based stats. Identities = 46/249 (18%), Positives = 88/249 (35%), Gaps = 59/249 (23%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRA-----EVTGSGK---KPW 60 + L + E F + LV + Y RQ K E G+G+ + Sbjct: 16 KKTLDLPE-VFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVP 74 Query: 61 RQKGTGRARSGSIKSPIW-RSGGVTFAAR-PQDHSQKV--NKKMY----------RGALK 106 R KG G R+G + R G + + + ++KV N K + +L Sbjct: 75 RVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLV 134 Query: 107 SILSELVRQDRL--IVVEKFSVEAPKTKLLAQKLKDMAL--------------------- 143 + ++ I+V +A KTK + L+++ + Sbjct: 135 EARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMR 194 Query: 144 -------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI---AFDKVVM-TADA 192 + +LI+ GE E L RN+ VD +D + L ++++ T A Sbjct: 195 NRRYTQRKGILIVHGESSE--MLGFRNIRGVDQMSIDSLDLLELAPGGVAGRLIIWTESA 252 Query: 193 VKQVEEMLA 201 ++++++ Sbjct: 253 FEKLDKIFG 261 >UniRef50_D1LYL0 Ribosomal protein L4 n=9 Tax=Fungi/Metazoa group RepID=D1LYL0_MANSE Length = 439 Score = 55.5 bits (133), Expect = 9e-07, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 90/250 (36%), Gaps = 58/250 (23%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ-----GTRAQKTRAEVTGSGK---KP 59 A + + F LV+ V V+ + ARQ +T AE G+G+ + Sbjct: 21 AGKTIPLP-FVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARI 79 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAA-RP-QDHSQKVNKKMYRG------------AL 105 R +G G RSG GG FA +P + ++VN + R AL Sbjct: 80 PRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAAVAAALAASGVPAL 139 Query: 106 KSI---LSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM-ALEDVL-------------- 147 + E + + L+V +K E KTK L+ + A DVL Sbjct: 140 VQARGHIIEKIPELPLVVSDKVQ-EITKTKQAVIFLRRVKAWSDVLKVYKSQRLRAGKGK 198 Query: 148 ------------IITGELDENLFLAARNLHKVDVRDATGIDPVSL----IAFDKVVMTAD 191 +I D+ L A RN+ V++ + ++ + L ++ T Sbjct: 199 MRNRRRVQRKGPLIIYHKDKGLSRAFRNIPGVEMLNVNKLNLLKLAPGGHLGRFIIWTQS 258 Query: 192 AVKQVEEMLA 201 A +++ + Sbjct: 259 AFDRLDALFG 268 >UniRef50_A7AUF0 Ribosomal protein RPL4A n=1 Tax=Babesia bovis RepID=A7AUF0_BABBO Length = 360 Score = 54.7 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 50/234 (21%), Positives = 79/234 (33%), Gaps = 50/234 (21%) Query: 13 TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQK-----TRAEVTGSGK---KPWRQKG 64 T+ F LV V + RQ K T A G+G+ + R KG Sbjct: 21 TLMPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKG 80 Query: 65 TGRARSGSIKSPIW-RSGGVTFAARP-QDHSQKVNKKMYRGALK----------SILSEL 112 G R+G + R+GG+ R + +KVN K R AL ++S Sbjct: 81 GGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRG 140 Query: 113 VRQDRL----IVVEKFSVEAPKTKLLAQKLKDMALE----------------------DV 146 R + L +VV+ + KTK + L+ + L Sbjct: 141 HRIEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGRKKRPVGP 200 Query: 147 LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV----VMTADAVKQV 196 LII A RN+ V+V ++ + L + V + A + + Sbjct: 201 LIILRATAVEGKRAFRNIPGVEVACVERLNLLKLAPAGALGRLCVWSKSAFEAL 254 >UniRef50_C3N5S8 50S ribosomal protein L4P n=10 Tax=Sulfolobaceae RepID=RL4_SULIA Length = 267 Score = 54.0 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 84/250 (33%), Gaps = 60/250 (24%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAY-----AAGARQGTRAQKTRAEVTG---SGKK 58 + + + F + ++ +V +A R ++T AE G + Sbjct: 18 NKVKEVELP-FIFSFPVRKDIIRRVFLAEFTHSLQPKGRDPMAGKRTSAESFGINLGMAR 76 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELV---- 113 R K +G A +P G +TF + ++VN K + A+ S LS Sbjct: 77 VPRVKNSGEA----ALAPNTVGGRLTFPPSVDKKLVEEVNDKEKQLAVISALSATADTVF 132 Query: 114 --RQDRL--------IVVEKFSVEAPKTKLLAQKLKDMALED------------------ 145 + + IVV V + + L+ + + D Sbjct: 133 VKARGHVFKDSVSFPIVVTDDIVSLKTASEVEEFLEKIGVYDDVKRVKERIRIRAGKGKM 192 Query: 146 ----------VLIITGELDENLFLAARNLHKVDVRDATGIDPVSL----IAFDKVVMTAD 191 LII + + + AARN+ VDV +A + + L + T Sbjct: 193 RGRKYKEPIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHPGRLTIYTET 252 Query: 192 AVKQVEEMLA 201 ++K ++E L+ Sbjct: 253 SIKILDERLS 262 >UniRef50_P36578 60S ribosomal protein L4 n=76 Tax=Eukaryota RepID=RL4_HUMAN Length = 427 Score = 53.2 bits (127), Expect = 4e-06, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 84/248 (33%), Gaps = 58/248 (23%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQ-----KTRAEVTGSGK---KPWR 61 +T+ F +V+ V RQ +T AE G+G+ + R Sbjct: 20 KNVTLP-AVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKS----------IL 109 +G G RSG GG FA + ++VN R A+ S ++ Sbjct: 79 VRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVM 138 Query: 110 SELVRQDRL----IVVEKFSVEAPKTKLLAQKLKDMALED-------------------- 145 S+ R + + +VVE KTK LK + + Sbjct: 139 SKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198 Query: 146 --------VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV----VMTADAV 193 II E D + A RN+ + + + + ++ + L V + T A Sbjct: 199 RRRIQRRGPCIIYNE-DNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAF 257 Query: 194 KQVEEMLA 201 ++++E+ Sbjct: 258 RKLDELYG 265 >UniRef50_UPI0001509E5C ribosomal protein L4/L1 family protein n=1 Tax=Tetrahymena thermophila RepID=UPI0001509E5C Length = 410 Score = 51.3 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 74/256 (28%), Gaps = 61/256 (23%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ---------GTRAQKTRAEVTGSG 56 K + LT+ F +VH+V +Q GT AE G+G Sbjct: 17 KQTATKLTLP-AVFTAPIRTDIVHKVFTDLNKNRKQASGVKISTRGTAGMGHSAESWGTG 75 Query: 57 K---KPWRQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYR--------- 102 + + R G+G RSG G FA + ++VN R Sbjct: 76 RAVARIPRVGGSGTHRSGQAAFGNQCRKGRMFAPLKTYRRVHRRVNVNQKRHAVAAALAA 135 Query: 103 -----GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL-------------- 143 Q+ V + KTK LK + Sbjct: 136 SALVPLVFARGHRISNVQELPYVFDDSVESYEKTKQAVAFLKRVGAYDDVLRVAETKALR 195 Query: 144 --------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV--- 186 L++ G L A RN+ VDV + ++ + L V Sbjct: 196 AGQGKLRNRRYKLRRGPLVVYGNEKSTLTRALRNIPGVDVCNVNRLNLLQLAPGGHVGRF 255 Query: 187 -VMTADAVKQVEEMLA 201 + T A K++ E+ Sbjct: 256 IIWTESAFKKLNEIFG 271 >UniRef50_Q25805 Rpl4 protein n=1 Tax=Plasmodium falciparum 3D7 RepID=Q25805_PLAF7 Length = 190 Score = 50.9 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 44 RAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRG 103 + K +++V S KK QKG G+AR + KSP+ + G F K NK + + Sbjct: 54 KHTKNKSKVYFSNKKIRVQKGLGKARLKNFKSPVCKQGACNFGP-----FYKENKIISKI 108 Query: 104 ALKSILSELVRQDR 117 + I L+ R Sbjct: 109 NYRLIFVYLLINKR 122 >UniRef50_UPI0001BCE474 50S ribosomal protein L4 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCE474 Length = 178 Score = 50.1 bits (119), Expect = 4e-05, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 19/48 (39%) Query: 147 LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 L+ D + RN+ V + ++ ++ D ++ T +A Sbjct: 2 LVAVTREDVVTAKSLRNVADVVILPFDQLNTYDVLKSDDLIFTREAFD 49 >UniRef50_UPI000038E236 50S ribosomal protein L4P n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E236 Length = 256 Score = 50.1 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 67/222 (30%), Gaps = 54/222 (24%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + + + F + E L+H+ A + RQ + A G G Sbjct: 11 EVTKEIELPQ-VFEIETREDLIHKAFRAISLSMRQPYGSSP-LAGTRRVGHNLGPNHGIS 68 Query: 67 R-ARSGSIKSPI----WRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRL-- 118 R R S + G + R + +K+NKK R A S ++ ++R+ Sbjct: 69 RIPRLASGSRGVLLASMVGGRSALSPRSDKVLYKKINKKERRLAKLSAIAFTANKERILQ 128 Query: 119 ----------------IVVEKFSVEAPKTKLLAQKLKDMAL------------------- 143 +VVE K K Q L ++ + Sbjct: 129 RGHRISEESIEKLTFPVVVEDDIESITKVKDAVQVLSNLGVYDDVLRSKDGKKIRAGRGK 188 Query: 144 --------EDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 L+I G E+L A +L VD+ + Sbjct: 189 MRNRTYKQPKSLLIVGSSVESL-RAFASLPGVDLASLNSLSI 229 >UniRef50_A3FPV6 60S ribosomal protein-like, putative n=23 Tax=Eukaryota RepID=A3FPV6_CRYPV Length = 394 Score = 49.0 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 85/253 (33%), Gaps = 60/253 (23%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR-AQKT----RAEVTGSGK---K 58 A S++ + T F LV V + RQ + K AE G+G+ + Sbjct: 18 KATSSIPLP-TVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVAR 76 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKS--------- 107 R +G +RSG GG F+ + +K+N R A+ + Sbjct: 77 IPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPS 136 Query: 108 -ILSELVRQDRL----IVVEKFSVEAPKTKLLAQKLKDMALE------------------ 144 +++ R + + +V+ KT + K+ Sbjct: 137 LVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGK 196 Query: 145 ------------DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI---AFDKV-VM 188 L++ E D + A RN+ VD ++ + L F ++ + Sbjct: 197 GKMRNRRRVCAVGPLVVYAE-DNGIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTIF 255 Query: 189 TADAVKQVEEMLA 201 T A+K+++E+ Sbjct: 256 TKGAIKRLQEIYG 268 >UniRef50_Q1KYM6 RPL4 (Fragment) n=1 Tax=Streblomastix strix RepID=Q1KYM6_9EUKA Length = 492 Score = 48.2 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 85/251 (33%), Gaps = 57/251 (22%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQG-----TRAQKTRAEVTGSGK---K 58 A+ V +VH V + A RQ + AE G+G+ + Sbjct: 16 KARDTTAVPSVIRYSPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVAR 75 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSE----- 111 R G+G +R+G GG ++ + + VN R A+ S ++ Sbjct: 76 VPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPS 135 Query: 112 --LVRQDRL-------IVVEKFSVEAPKTKLLAQKLKDMALED----------------- 145 L R ++ +VV + KTK + L + D Sbjct: 136 LVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGK 195 Query: 146 -----------VLIITGELDENLFLAARNLHKVDVRDATGIDPVSL----IAFDKVVMTA 190 VLI+ + +E L A RN+ VD+ + ++ L ++ T Sbjct: 196 ARNRRYTQRRGVLIVHDQ-NEGLANAFRNISGVDISNVXRLNIRDLAPGGHLGRFIIWTE 254 Query: 191 DAVKQVEEMLA 201 A K+++++ Sbjct: 255 GAYKKLDKLYG 265 >UniRef50_C7DIC7 Ribosomal protein L4/L1e n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIC7_9EURY Length = 261 Score = 47.0 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 83/253 (32%), Gaps = 53/253 (20%) Query: 1 MELVLKDAQSALTVS-ETTFGRDFNEALVHQVVVAYAAGARQG----------TRAQKTR 49 ++++ D + + F + L+ + +A Q T AQ Sbjct: 5 IDVLNIDGKKDHKLDLAEVFDTEIEPWLIRRAAIAENTYGLQPQGHFPLAGMQTTAQYYG 64 Query: 50 AEVTGS-----GKKPWRQKGTGRARSGS-IKSPIWRSGGVTFA-ARPQDHSQKVNKKMYR 102 A ++ G+ ++ G G + P G + +K+NKK Y+ Sbjct: 65 AMMSYRTGRHMGRAIRPREKLGGGVQGKVKRIPSSVKGKRAHPHMIEKKLVEKMNKKEYQ 124 Query: 103 GALKSILSELVRQDRL------IVVEKFSVEAPKTKLLAQKLKDMAL------------- 143 A+KS ++ + IV K+K + + LK + + Sbjct: 125 AAIKSAIAYSASSNLASGVETPIVFSDTLESVKKSKDIIKMLKAINIYKLISDKSKREKG 184 Query: 144 -----------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI---AFDKV-VM 188 + + II D+ A+RN+ + + + L+ V + Sbjct: 185 TSRRTQRKAFSKKIAIIVLN-DDGAVRASRNIPGITAVKLSALKVNDLVPGGEHPLVPIW 243 Query: 189 TADAVKQVEEMLA 201 + A+K ++ +A Sbjct: 244 SESALKSIDHEIA 256 >UniRef50_B9W418 Putative ribosomal protein conserved domain L4/L1 family (Fragment) n=1 Tax=Histomonas meleagridis RepID=B9W418_9EUKA Length = 275 Score = 43.6 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 148 IITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMTADAVKQVEEML 200 ++ DE + A RN+ V+++ + L K V+ T A K ++E+ Sbjct: 61 LVVYNKDEGVVKAFRNIPGVEIQSVHRLSIYQLAPAGKMGRLVIWTESAFKALDEIY 117 >UniRef50_D2EG73 Ribosomal protein L4/L1e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EG73_9EURY Length = 237 Score = 43.2 bits (101), Expect = 0.005, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 57/173 (32%), Gaps = 36/173 (20%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAY------------AAGARQGTRAQKTR--AEVTG 54 ++ + E F N + + +A AG R+ R K R + + Sbjct: 12 SGSIELPE-VFNTPVNYQTLKKAFLAEDSERFQLKYTDPMAGKRKVARLTKRRRSYKTSY 70 Query: 55 SG------KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQK-VNKKMYRGALKS 107 +K + GT G + +P G + + K +NKK R A+K Sbjct: 71 GRGLDRTPRKTLSKVGTNFYYVGPV-APNTVGGREAHPPQAEKRLVKGINKKEKRMAIKM 129 Query: 108 ILSELVRQDRL-------------IVVEKFSVEAPKTKLLAQKLKDMALEDVL 147 ++ + IV++ KTK + L + LE+ L Sbjct: 130 GIAASANIKEVSKFHNLGGLKELPIVIDGNLETLKKTKDAIKLLSAIGLENEL 182 >UniRef50_B2A4H6 Glycosyl transferase family 2 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4H6_NATTJ Length = 336 Score = 41.3 bits (96), Expect = 0.018, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 10/88 (11%) Query: 99 KMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLF 158 K + A+ S LS+ LIVV S ++ KT L ++ + V +I E ++ Sbjct: 16 KFLQQAIDSALSQTYPSTDLIVVNDGSTDSTKT-----ILDNLNDQRVTVIHLEENQG-- 68 Query: 159 LAARNLHKVDVRDATGIDPVSLIAFDKV 186 A N + + A+G + +S+ D + Sbjct: 69 --AANALNIGIEQASG-NWISIHDADDI 93 >UniRef50_A9BL16 Rpl1 n=1 Tax=Cryptophyta RepID=A9BL16_9CRYP Length = 312 Score = 41.3 bits (96), Expect = 0.018, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 70/220 (31%), Gaps = 55/220 (25%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVT-----GSGK---KPW 60 ++ + E F + V + + RQ ++ T G+G+ + Sbjct: 17 VDSVNLPE-IFLSPIRIDIFKFVFLNMSKNKRQSYSVNQSSGMNTSAISWGTGRAVARIP 75 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKS------ILSEL 112 R KG+G RSG + GG F+ + K+ K R A+ + ++S + Sbjct: 76 RVKGSGTNRSGQGAVGNFCRGGRMFSPTTIWRKWHHKIIKNQRRQAVLTSVACSGLVSLV 135 Query: 113 VRQDRLI--------VVEKFSVEAPKTKLLAQKLKDMAL---------EDVL-------- 147 + + I V+E TK LK++ + L Sbjct: 136 MARGHKISETPEIPLVIESCVESIICTKFGQTALKNLGAYSDIRDKLKKKTLKAGKGKLR 195 Query: 148 ----------IITGELDENLFLAARNLHKVDVRDATGIDP 177 +I E + A RN+ ++ ++ Sbjct: 196 NRRRKKYLGPLIIFEKN---ARAFRNIPGIETCCIDYLNI 232 >UniRef50_A2DAA4 Ribosomal protein, putative n=3 Tax=Trichomonas vaginalis RepID=A2DAA4_TRIVA Length = 370 Score = 41.3 bits (96), Expect = 0.018, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 73/227 (32%), Gaps = 74/227 (32%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKP----WRQK 63 S + + F +V +V V A A+Q +GKK W Sbjct: 15 KASTIELP-KVFDTPIRAEVVKEVYVNLAKNAQQPHAND------PMAGKKVSAISW--- 64 Query: 64 GTGRARS--------GSIKSPI-----WRSGGVTFAARP--QDHSQKVNKKMYR------ 102 GTGRA++ GS ++ + GG F + + V + + Sbjct: 65 GTGRAKARVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASA 124 Query: 103 ----------GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL----EDVL- 147 A IL E V++ ++VV+ E +T+ + LK + + + VL Sbjct: 125 IAATAVVPLVQARGHILGE-VKEVPIVVVDAVQ-EIKRTRDAVELLKKVGVYGDVQRVLD 182 Query: 148 ----------------------IITGELDENLFLAARNLHKVDVRDA 172 ++ D+ + A RN+ V+ Sbjct: 183 GSVHRSSKGKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETISV 229 >UniRef50_Q1JE58 LSU ribosomal protein L1E (L4P) n=2 Tax=Streptococcus pyogenes RepID=Q1JE58_STRPB Length = 109 Score = 39.0 bits (90), Expect = 0.091, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAG-----ARQGTRAQKTRAEVTGSGKK 58 S++ +++ FG + NE++V VV++ A R T Q +V KK Sbjct: 14 VSSVELNDAIFGIEPNESVVFDVVISQRASFAKVLMRLKTVQQYQVVDVNHGVKK 68 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C1TLI0 LSU ribosomal protein L4P n=1 Tax=Dethiosulfovib... 264 2e-69 UniRef50_C6C186 50S ribosomal protein L4 n=6 Tax=Bacteria RepID=... 253 4e-66 UniRef50_C1KZH9 50S ribosomal protein L4 n=21 Tax=Bacteria RepID... 250 2e-65 UniRef50_B0RZU1 50S ribosomal protein L4 n=32 Tax=Bacteria RepID... 248 1e-64 UniRef50_C9M934 Ribosomal protein L4/L1 family protein n=2 Tax=S... 247 2e-64 UniRef50_B8I7Y0 50S ribosomal protein L4 n=33 Tax=Firmicutes Rep... 246 2e-64 UniRef50_Q034Y4 50S ribosomal protein L4 n=209 Tax=Bacteria RepI... 246 4e-64 UniRef50_Q21M56 50S ribosomal protein L4 n=42 Tax=Bacteria RepID... 243 2e-63 UniRef50_A3DJH3 50S ribosomal protein L4 n=16 Tax=Clostridiales ... 242 7e-63 UniRef50_C5BQ62 50S ribosomal protein L4 n=266 Tax=Gammaproteoba... 241 7e-63 UniRef50_A5FRZ0 50S ribosomal protein L4 n=5 Tax=Dehalococcoides... 241 1e-62 UniRef50_Q8VY61 50S ribosomal protein L4 n=18 Tax=Magnoliophyta ... 240 2e-62 UniRef50_A9UV13 Predicted protein n=1 Tax=Monosiga brevicollis R... 240 2e-62 UniRef50_Q30Z43 50S ribosomal protein L4 n=8 Tax=Bacteria RepID=... 240 2e-62 UniRef50_A7RJ96 Predicted protein n=2 Tax=Metazoa RepID=A7RJ96_N... 240 2e-62 UniRef50_B2V7L2 Ribosomal protein L4/L1e n=4 Tax=Hydrogenotherma... 239 4e-62 UniRef50_D0MYG7 50S ribosomal protein L4 n=1 Tax=Phytophthora in... 239 5e-62 UniRef50_C5JB89 50S ribosomal protein L4 n=1 Tax=uncultured bact... 239 5e-62 UniRef50_Q2LQA0 50S ribosomal protein L4 n=12 Tax=Bacteria RepID... 238 6e-62 UniRef50_C0Q9X2 50S ribosomal protein L4 n=1 Tax=Desulfobacteriu... 238 7e-62 UniRef50_A9T3B9 Predicted protein n=3 Tax=Embryophyta RepID=A9T3... 236 3e-61 UniRef50_D1CFC7 Ribosomal protein L4/L1e n=2 Tax=Bacteria RepID=... 235 5e-61 UniRef50_Q03ZP4 50S ribosomal protein L4 n=19 Tax=Firmicutes Rep... 235 6e-61 UniRef50_D1AWK4 Ribosomal protein L4/L1e n=7 Tax=Fusobacteriacea... 235 9e-61 UniRef50_A9NED4 50S ribosomal protein L4 n=11 Tax=Bacteria RepID... 234 2e-60 UniRef50_A0L5X4 50S ribosomal protein L4 n=1 Tax=Magnetococcus s... 232 4e-60 UniRef50_B4JAB3 GH11428 n=2 Tax=Coelomata RepID=B4JAB3_DROGR 232 5e-60 UniRef50_B4KI26 GI14673 n=2 Tax=Drosophila RepID=B4KI26_DROMO 232 6e-60 UniRef50_Q02W25 50S ribosomal protein L4 n=145 Tax=Bacteria RepI... 231 8e-60 UniRef50_A8IAS4 Ribosomal protein L4/L1e n=4 Tax=Alphaproteobact... 231 1e-59 UniRef50_Q1Q137 Strongly similar to 50S ribosomal protein L4 n=1... 229 5e-59 UniRef50_Q110A8 50S ribosomal protein L4 n=17 Tax=Cyanobacteria ... 228 1e-58 UniRef50_P10135 50S ribosomal protein L4 n=9 Tax=Bacteria RepID=... 227 2e-58 UniRef50_D2SHA2 Ribosomal protein L4/L1e n=2 Tax=Actinobacteria ... 226 3e-58 UniRef50_B5YG46 50S ribosomal protein L4 n=1 Tax=Thermodesulfovi... 226 5e-58 UniRef50_B8IYH3 50S ribosomal protein L4 n=6 Tax=Desulfovibriona... 225 7e-58 UniRef50_A6GCH8 50S ribosomal protein L4 n=1 Tax=Plesiocystis pa... 225 8e-58 UniRef50_B6WX21 Putative uncharacterized protein n=1 Tax=Desulfo... 225 8e-58 UniRef50_Q2GL58 50S ribosomal protein L4 n=15 Tax=Rickettsiales ... 224 1e-57 UniRef50_B4U745 50S ribosomal protein L4 n=4 Tax=Aquificaceae Re... 224 1e-57 UniRef50_B0U0Y8 50S ribosomal protein L4 n=35 Tax=Gammaproteobac... 224 2e-57 UniRef50_Q39Y05 50S ribosomal protein L4 n=11 Tax=Desulfuromonad... 224 2e-57 UniRef50_D0LIC4 Ribosomal protein L4/L1e n=1 Tax=Haliangium ochr... 223 3e-57 UniRef50_C1SPI5 Ribosomal protein L4 n=1 Tax=Denitrovibrio aceti... 223 3e-57 UniRef50_A5IM84 50S ribosomal protein L4 n=51 Tax=Bacteria RepID... 223 4e-57 UniRef50_Q9V3D0 Mitochondrial ribosomal protein L4 n=14 Tax=Endo... 223 4e-57 UniRef50_C7PU72 Ribosomal protein L4/L1e n=11 Tax=Bacteroidetes ... 223 4e-57 UniRef50_Q2JFH5 50S ribosomal protein L4 n=91 Tax=Actinobacterid... 221 8e-57 UniRef50_A4FPM4 50S ribosomal protein L4 n=49 Tax=Actinobacteria... 221 1e-56 UniRef50_A5USI8 LSU ribosomal protein L4P n=8 Tax=Chloroflexi Re... 220 2e-56 UniRef50_Q9BYD3 39S ribosomal protein L4, mitochondrial n=28 Tax... 220 2e-56 UniRef50_Q00YX6 50S ribosomal protein L4 (ISS) n=2 Tax=Ostreococ... 220 3e-56 UniRef50_A5FZW4 50S ribosomal protein L4 n=180 Tax=Alphaproteoba... 220 3e-56 UniRef50_C1A6Q6 50S ribosomal protein L4 n=1 Tax=Gemmatimonas au... 219 4e-56 UniRef50_Q2S3R3 50S ribosomal protein L4 n=2 Tax=Rhodothermaceae... 218 7e-56 UniRef50_P61061 50S ribosomal protein L4 n=1 Tax=Bdellovibrio ba... 218 8e-56 UniRef50_C6XLG6 Ribosomal protein L4/L1e n=7 Tax=Alphaproteobact... 218 8e-56 UniRef50_B2KEM0 Ribosomal protein L4/L1e n=1 Tax=Elusimicrobium ... 218 1e-55 UniRef50_B3QY25 50S ribosomal protein L4 n=15 Tax=Bacteroidetes/... 218 1e-55 UniRef50_Q2JV82 50S ribosomal protein L4 n=17 Tax=Cyanobacteria ... 217 2e-55 UniRef50_UPI000186E58D mitochondrial 50S ribosomal protein L4, p... 215 8e-55 UniRef50_Q4JT48 50S ribosomal protein L4 n=7 Tax=Actinomycetales... 214 1e-54 UniRef50_C8W7Z8 Ribosomal protein L4/L1e n=7 Tax=Coriobacteriace... 214 1e-54 UniRef50_B9XFN0 Ribosomal protein L4/L1e n=1 Tax=bacterium Ellin... 214 1e-54 UniRef50_B0CPN7 Predicted protein n=2 Tax=Agaricales RepID=B0CPN... 214 1e-54 UniRef50_B3EUM2 50S ribosomal protein L4 n=71 Tax=cellular organ... 214 1e-54 UniRef50_A5CCL1 50S ribosomal protein L4 n=18 Tax=cellular organ... 214 2e-54 UniRef50_Q12GX0 50S ribosomal protein L4 n=18 Tax=Proteobacteria... 214 2e-54 UniRef50_Q1D774 50S ribosomal protein L4 n=3 Tax=Myxococcales Re... 213 4e-54 UniRef50_UPI00017927E1 PREDICTED: similar to GA19152-PA n=1 Tax=... 212 5e-54 UniRef50_Q83FY7 50S ribosomal protein L4 n=7 Tax=Micrococcineae ... 212 5e-54 UniRef50_A9BCP6 50S ribosomal protein L4 n=25 Tax=cellular organ... 211 9e-54 UniRef50_C6XHJ0 50S ribosomal protein L4 n=2 Tax=Rhizobiaceae Re... 211 9e-54 UniRef50_A3EVS0 Ribosomal protein L4 n=2 Tax=Leptospirillum sp. ... 211 9e-54 UniRef50_C1F641 50S ribosomal protein L4 n=1 Tax=Acidobacterium ... 211 1e-53 UniRef50_D1NBS4 Ribosomal protein L4/L1e n=1 Tax=Victivallis vad... 210 2e-53 UniRef50_C0QVZ7 50S ribosomal protein L4 n=3 Tax=Brachyspira Rep... 210 3e-53 UniRef50_D2VLH2 Ribosomal protein L4/L1e n=1 Tax=Naegleria grube... 209 3e-53 UniRef50_Q1IX73 50S ribosomal protein L4 n=10 Tax=Bacteria RepID... 209 4e-53 UniRef50_Q54RB5 Putative uncharacterized protein n=1 Tax=Dictyos... 208 9e-53 UniRef50_C7MFF5 LSU ribosomal protein L4P n=1 Tax=Brachybacteriu... 208 1e-52 UniRef50_P51313 50S ribosomal protein L4, chloroplastic n=3 Tax=... 207 2e-52 UniRef50_Q0EW37 50S ribosomal protein L4 n=1 Tax=Mariprofundus f... 206 3e-52 UniRef50_UPI0001C30EB8 ribosomal protein L4/L1e n=1 Tax=Conexiba... 206 4e-52 UniRef50_C9RR33 Ribosomal protein L4/L1e n=1 Tax=Fibrobacter suc... 205 7e-52 UniRef50_Q605B3 50S ribosomal protein L4 n=3 Tax=Gammaproteobact... 204 1e-51 UniRef50_O17005 Putative uncharacterized protein n=2 Tax=Caenorh... 204 1e-51 UniRef50_Q1ISC1 50S ribosomal protein L4 n=2 Tax=Acidobacteria R... 204 1e-51 UniRef50_Q1H4N6 50S ribosomal protein L4 n=174 Tax=Proteobacteri... 204 2e-51 UniRef50_B1GZ84 50S ribosomal protein L4 n=1 Tax=uncultured Term... 203 3e-51 UniRef50_B7J468 50S ribosomal protein L4 n=4 Tax=cellular organi... 202 6e-51 UniRef50_UPI0000D54D0B 50S ribosomal protein L4 n=1 Tax=Psychrof... 202 6e-51 UniRef50_A6DPN5 50S ribosomal protein L4 n=1 Tax=Lentisphaera ar... 201 1e-50 UniRef50_C1E7J4 Predicted protein n=2 Tax=Micromonas RepID=C1E7J... 200 2e-50 UniRef50_C6HWF6 Ribosomal protein L4 n=1 Tax=Leptospirillum ferr... 199 6e-50 UniRef50_B0VI30 50S ribosomal protein L4 n=1 Tax=Candidatus Cloa... 198 7e-50 UniRef50_Q2GED8 50S ribosomal protein L4 n=2 Tax=Neorickettsia R... 196 3e-49 UniRef50_P49546 50S ribosomal protein L4, chloroplastic n=3 Tax=... 196 3e-49 UniRef50_C1Z9D6 LSU ribosomal protein L4P n=1 Tax=Planctomyces l... 195 6e-49 UniRef50_B5Y986 Ribosomal protein L4/L1 family n=1 Tax=Coprother... 195 6e-49 UniRef50_B8LSS3 50S ribosomal protein L4 n=6 Tax=Eurotiomycetida... 195 6e-49 UniRef50_B2S2D7 50S ribosomal protein L4 n=25 Tax=Spirochaetacea... 195 7e-49 UniRef50_D1J751 Chloroplast 50S ribosomal protein L4 n=2 Tax=Pha... 194 1e-48 UniRef50_Q0FQD6 50S ribosomal protein L4 (Fragment) n=1 Tax=Rose... 194 1e-48 UniRef50_A2R423 Contig An14c0190, complete genome n=6 Tax=Tricho... 194 2e-48 UniRef50_Q4PHH8 Putative uncharacterized protein n=1 Tax=Ustilag... 193 2e-48 UniRef50_UPI0001509D48 ribosomal protein L4/L1 family protein n=... 193 4e-48 UniRef50_C1FJ75 Predicted protein (Fragment) n=2 Tax=Micromonas ... 193 4e-48 UniRef50_O74801 60S ribosomal protein yml6, mitochondrial n=1 Ta... 192 5e-48 UniRef50_B1ZNE7 Ribosomal protein L4/L1e n=3 Tax=Verrucomicrobia... 192 6e-48 UniRef50_B7P338 Ribosomal protein L4, putative (Fragment) n=1 Ta... 192 6e-48 UniRef50_B4SKW4 50S ribosomal protein L4 n=13 Tax=Xanthomonadace... 191 8e-48 UniRef50_Q04PT9 50S ribosomal protein L4 n=23 Tax=Leptospira Rep... 191 2e-47 UniRef50_A4S817 Plastid ribosomal protein L4 large ribosomal sub... 190 2e-47 UniRef50_Q7UN19 50S ribosomal protein L4 n=1 Tax=Rhodopirellula ... 189 3e-47 UniRef50_Q1AU30 50S ribosomal protein L4 n=1 Tax=Rubrobacter xyl... 189 4e-47 UniRef50_B2WIG6 50S ribosomal protein L4 n=5 Tax=Leotiomyceta Re... 188 8e-47 UniRef50_D0RNM6 Ribosomal protein, L4/L1 family n=1 Tax=alpha pr... 188 9e-47 UniRef50_Q84U22 Plastid ribosomal protein L4 n=1 Tax=Chlamydomon... 188 9e-47 UniRef50_Q7XYP3 Ribosomal protein rpL4 (Fragment) n=1 Tax=Bigelo... 188 1e-46 UniRef50_C4XG14 Putative uncharacterized protein n=2 Tax=Mycopla... 187 2e-46 UniRef50_Q252V4 50S ribosomal protein L4 n=15 Tax=Chlamydiaceae ... 187 2e-46 UniRef50_D0J9J1 50S ribosomal subunit protein L4 n=2 Tax=Blattab... 187 2e-46 UniRef50_O50061 50S ribosomal protein L4, chloroplastic n=23 Tax... 186 3e-46 UniRef50_Q8D211 50S ribosomal protein L4 n=2 Tax=Gammaproteobact... 186 3e-46 UniRef50_B2UMT9 Ribosomal protein L4/L1e n=2 Tax=Verrucomicrobia... 186 4e-46 UniRef50_P75579 50S ribosomal protein L4 n=2 Tax=Mycoplasma RepI... 186 5e-46 UniRef50_B8BX09 RM4, ribosomal protein 4 (Fragment) n=1 Tax=Thal... 186 6e-46 UniRef50_C8V2I4 50S ribosomal protein L4 (AFU_orthologue; AFUA_5... 185 6e-46 UniRef50_B7T1Y3 Ribosomal protein L4 n=1 Tax=Vaucheria litorea R... 185 9e-46 UniRef50_C1BS34 Mitochondrial 39S ribosomal protein L4 n=1 Tax=L... 185 9e-46 UniRef50_C7Z3X5 Predicted protein n=3 Tax=Sordariomycetes RepID=... 184 1e-45 UniRef50_Q7VQE7 50S ribosomal protein L4 n=7 Tax=Gammaproteobact... 184 2e-45 UniRef50_B6HLY3 Pc21g08410 protein n=3 Tax=mitosporic Trichocoma... 183 3e-45 UniRef50_B6KDX9 50S ribosomal protein L4, putative n=3 Tax=Toxop... 183 3e-45 UniRef50_B1AIM1 50S ribosomal protein L4 n=15 Tax=Mycoplasmatace... 183 4e-45 UniRef50_A8QA96 Putative uncharacterized protein n=1 Tax=Malasse... 183 5e-45 UniRef50_Q6B8V4 50S ribosomal protein L4, chloroplastic n=1 Tax=... 182 8e-45 UniRef50_A5IYY5 50S ribosomal protein L4 n=1 Tax=Mycoplasma agal... 182 8e-45 UniRef50_Q8EUB4 50S ribosomal protein L4 n=1 Tax=Mycoplasma pene... 181 1e-44 UniRef50_A8Q8Q6 Ribosomal protein L4/L1 family protein n=1 Tax=B... 180 3e-44 UniRef50_Q9TLT3 50S ribosomal protein L4, chloroplastic n=1 Tax=... 179 3e-44 UniRef50_B6K4T6 50S ribosomal protein L4 n=1 Tax=Schizosaccharom... 178 1e-43 UniRef50_D2R5T8 Ribosomal protein L4/L1e n=4 Tax=Planctomycetace... 178 1e-43 UniRef50_Q4UI83 Putative uncharacterized protein n=1 Tax=Theiler... 178 1e-43 UniRef50_Q6KI54 50S ribosomal protein L4 n=1 Tax=Mycoplasma mobi... 177 2e-43 UniRef50_A5KRQ2 Ribosomal protein L4/L1e n=1 Tax=candidate divis... 177 2e-43 UniRef50_O46895 50S ribosomal protein L4, chloroplastic n=1 Tax=... 177 2e-43 UniRef50_Q4A5C2 50S ribosomal protein L4 n=1 Tax=Mycoplasma syno... 176 3e-43 UniRef50_Q7RXV7 60S ribosomal protein L4, mitochondrial n=5 Tax=... 176 3e-43 UniRef50_Q6ME62 Putative 50S ribosomal protein L4 n=3 Tax=Parach... 176 6e-43 UniRef50_Q85FW2 50S ribosomal protein L4, chloroplastic n=1 Tax=... 175 1e-42 UniRef50_Q1CRU2 50S ribosomal protein L4 n=81 Tax=Epsilonproteob... 174 1e-42 UniRef50_Q06RI4 23S ribosomal protein L4 n=1 Tax=Brucella ceti R... 174 1e-42 UniRef50_Q075M8 Plastid 50S ribosomal protein L4 family (Fragmen... 174 2e-42 UniRef50_Q8IB54 Mitochondrial ribosomal protein L4, putative n=1... 173 3e-42 UniRef50_UPI000180C8CE PREDICTED: similar to mitochondrial ribos... 173 4e-42 UniRef50_Q4FLL9 50S ribosomal protein L4 n=3 Tax=Candidatus Pela... 171 1e-41 UniRef50_Q6UCS1 Ribosomal protein L4 n=1 Tax=uncultured marine a... 169 4e-41 UniRef50_A8Z669 50S ribosomal subunit protein L4 n=3 Tax=Candida... 169 4e-41 UniRef50_D2IS95 Ribosomal protein L4 n=1 Tax=Cryptomonas paramec... 169 5e-41 UniRef50_B2XTF4 50S ribosomal protein L4 n=2 Tax=Heterosigma aka... 169 5e-41 UniRef50_Q4EE76 Ribosomal protein L4/L1 family n=1 Tax=Listeria ... 168 9e-41 UniRef50_Q5KM69 Ribosomal protein L4, putative n=2 Tax=Filobasid... 168 1e-40 UniRef50_Q601L4 50S ribosomal protein L4 n=6 Tax=Mycoplasma RepI... 166 4e-40 UniRef50_Q0INA7 Os12g0488600 protein n=1 Tax=Oryza sativa Japoni... 162 5e-39 UniRef50_Q8GM59 50S ribosomal protein L4 n=3 Tax=Mycoplasma RepI... 162 5e-39 UniRef50_B3E0I5 50S ribosomal protein L4 n=1 Tax=Methylacidiphil... 159 4e-38 UniRef50_B4CUX4 Ribosomal protein L4/L1e n=1 Tax=Chthoniobacter ... 159 5e-38 UniRef50_C5KH52 Putative uncharacterized protein n=1 Tax=Perkins... 158 8e-38 UniRef50_A0CQM2 Chromosome undetermined scaffold_24, whole genom... 158 8e-38 UniRef50_Q6BKF7 DEHA2F22330p n=4 Tax=Saccharomycetales RepID=Q6B... 158 9e-38 UniRef50_A8J5Z5 Mitochondrial ribosomal protein L4 (Fragment) n=... 155 7e-37 UniRef50_B7FXM9 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 153 4e-36 UniRef50_P51998 54S ribosomal protein YmL6, mitochondrial n=12 T... 150 2e-35 UniRef50_B9WJJ8 60S ribosomal (Large subunit) protein, mitochond... 147 2e-34 UniRef50_C4PXU3 50S ribosomal protein L4, putative n=1 Tax=Schis... 147 2e-34 UniRef50_C4R1R6 Putative uncharacterized protein n=1 Tax=Pichia ... 138 1e-31 UniRef50_Q8KTP1 Ribosomal protein L4 n=1 Tax=Candidatus Tremblay... 136 4e-31 UniRef50_Q6C573 YALI0E20493p n=1 Tax=Yarrowia lipolytica RepID=Q... 131 2e-29 UniRef50_D2RE65 Ribosomal protein L4/L1e n=2 Tax=Archaea RepID=D... 127 2e-28 UniRef50_Q8I431 60S ribosomal protein L4, putative n=7 Tax=Eukar... 127 3e-28 UniRef50_P36578 60S ribosomal protein L4 n=76 Tax=Eukaryota RepI... 126 4e-28 UniRef50_Q4UES5 60S ribosomal subunit protein L4/L1, putative n=... 126 4e-28 UniRef50_A0B9W9 50S ribosomal protein L4P n=8 Tax=Euryarchaeota ... 123 3e-27 UniRef50_UPI0001509E5C ribosomal protein L4/L1 family protein n=... 122 6e-27 UniRef50_P09180 60S ribosomal protein L4 n=185 Tax=Eukaryota Rep... 122 9e-27 UniRef50_Q8TY91 50S ribosomal protein L4P n=2 Tax=Archaea RepID=... 120 3e-26 UniRef50_D1LYL0 Ribosomal protein L4 n=9 Tax=Fungi/Metazoa group... 118 1e-25 UniRef50_A7AUF0 Ribosomal protein RPL4A n=1 Tax=Babesia bovis Re... 117 2e-25 UniRef50_Q2NFV7 50S ribosomal protein L4P n=23 Tax=Euryarchaeota... 116 4e-25 UniRef50_C6UN10 Putative 50S ribosomal subunit protein L4 n=1 Ta... 116 4e-25 UniRef50_A3FPV6 60S ribosomal protein-like, putative n=23 Tax=Eu... 115 8e-25 UniRef50_P60847 50S ribosomal protein L4P n=1 Tax=Nanoarchaeum e... 114 1e-24 UniRef50_Q673S8 Ribosomal protein L4 n=7 Tax=environmental sampl... 114 2e-24 UniRef50_B0ETG0 60S ribosomal protein L4, putative n=6 Tax=Entam... 113 4e-24 UniRef50_B0R657 50S ribosomal protein L4P n=8 Tax=Halobacteriace... 112 7e-24 UniRef50_Q8SRC2 60S RIBOSOMAL PROTEIN L4 n=12 Tax=Apansporoblast... 110 2e-23 UniRef50_Q1KYM6 RPL4 (Fragment) n=1 Tax=Streblomastix strix RepI... 109 6e-23 UniRef50_Q4DUP9 Putative uncharacterized protein n=6 Tax=Trypano... 109 8e-23 UniRef50_UPI0001923E1E PREDICTED: hypothetical protein n=2 Tax=H... 109 8e-23 UniRef50_B5IFI8 Ribosomal protein L4/L1 family n=2 Tax=Acidulipr... 107 3e-22 UniRef50_Q9HIR0 50S ribosomal protein L4P n=3 Tax=Thermoplasmata... 106 3e-22 UniRef50_B5JYE1 Ribosomal protein L4/L1 family (Fragment) n=1 Ta... 106 5e-22 UniRef50_A8TE32 Ribosomal protein L4/L1e n=1 Tax=Methanococcus v... 105 1e-21 UniRef50_A6VHD3 50S ribosomal protein L4P n=18 Tax=Archaea RepID... 102 5e-21 UniRef50_Q9YFM1 50S ribosomal protein L4P n=7 Tax=Thermoprotei R... 100 2e-20 UniRef50_C3N5S8 50S ribosomal protein L4P n=10 Tax=Sulfolobaceae... 100 3e-20 UniRef50_C8N6G3 50S ribosomal protein L4 n=1 Tax=Cardiobacterium... 99 1e-19 UniRef50_Q9MTE6 Ribosomal protein L4 n=1 Tax=Toxoplasma gondii R... 96 1e-18 UniRef50_UPI0001BCDE73 50S ribosomal protein L4 n=1 Tax=Campylob... 93 4e-18 UniRef50_UPI000038E236 50S ribosomal protein L4P n=1 Tax=Ferropl... 93 5e-18 UniRef50_D2MKV5 Ribosomal protein L4/L1e n=1 Tax=Candidatus Pori... 91 2e-17 UniRef50_B8KWG3 Ribosomal protein L4/L1e n=1 Tax=gamma proteobac... 90 4e-17 UniRef50_C7DIC7 Ribosomal protein L4/L1e n=1 Tax=Candidatus Micr... 90 5e-17 UniRef50_Q7YN80 Ribosomal protein L4 n=1 Tax=Eimeria tenella Rep... 82 7e-15 UniRef50_D1ZWQ9 Whole genome shotgun sequence assembly, contig_1... 79 6e-14 UniRef50_Q05FI6 Ribosomal protein L4 n=4 Tax=Candidatus Carsonel... 69 6e-11 UniRef50_Q4Y0D5 Putative uncharacterized protein (Fragment) n=1 ... 67 5e-10 UniRef50_C5Y5B1 Putative uncharacterized protein Sb05g022750 n=1... 66 8e-10 UniRef50_Q5BZ19 SJCHGC04542 protein (Fragment) n=2 Tax=Schistoso... 62 1e-08 UniRef50_UPI0000E47D01 PREDICTED: hypothetical protein n=1 Tax=S... 60 6e-08 UniRef50_Q25805 Rpl4 protein n=1 Tax=Plasmodium falciparum 3D7 R... 58 2e-07 UniRef50_UPI0001BCE474 50S ribosomal protein L4 n=1 Tax=Aeromicr... 51 2e-05 Sequences not found previously or not previously below threshold: UniRef50_A9BL16 Rpl1 n=1 Tax=Cryptophyta RepID=A9BL16_9CRYP 101 1e-20 UniRef50_Q4U6T4 SL3 n=1 Tax=Brugia malayi RepID=Q4U6T4_BRUMA 92 9e-18 UniRef50_A2DAA4 Ribosomal protein, putative n=3 Tax=Trichomonas ... 89 1e-16 UniRef50_Q4FXU6 Ribosomal protein L1a, putative n=2 Tax=Kinetopl... 80 4e-14 UniRef50_A8B7H8 Ribosomal protein L4 n=2 Tax=Giardia intestinali... 75 1e-12 UniRef50_Q00UB0 Ribosomal protein RPL1/RPL2/RL4L4 (ISS) n=1 Tax=... 75 2e-12 UniRef50_A9A5J3 Ribosomal protein L4/L1e n=2 Tax=Thaumarchaeota ... 62 8e-09 UniRef50_D2EG73 Ribosomal protein L4/L1e n=1 Tax=Candidatus Parv... 61 2e-08 UniRef50_B9W418 Putative ribosomal protein conserved domain L4/L... 57 5e-07 UniRef50_Q5MGK5 Ribosomal protein 23 n=3 Tax=Neoptera RepID=Q5MG... 54 4e-06 UniRef50_C5LQ28 60S ribosomal subunit protein L4, putative n=4 T... 52 9e-06 UniRef50_Q3LWC7 Ribosomal protein L4A n=1 Tax=Bigelowiella natan... 52 1e-05 UniRef50_D1I7T8 Whole genome shotgun sequence of line PN40024, s... 52 2e-05 UniRef50_Q95YH2 Ribosomal protein L4 (Fragment) n=1 Tax=Parameci... 51 2e-05 UniRef50_Q5CLD6 60S ribosomal protein-like n=1 Tax=Cryptosporidi... 49 1e-04 UniRef50_B7XRA0 LSU ribosomal protein L1E (Fragment) n=1 Tax=Ent... 45 0.001 UniRef50_B6TX31 Putative uncharacterized protein n=1 Tax=Zea may... 44 0.002 UniRef50_B2A4H6 Glycosyl transferase family 2 n=1 Tax=Natranaero... 42 0.011 UniRef50_Q18CM4 Putative phosphoribosyl transferase (Putative co... 40 0.033 UniRef50_A6L3D7 Phosphate starvation-inducible protein PhoH n=65... 39 0.098 >UniRef50_C1TLI0 LSU ribosomal protein L4P n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLI0_9BACT Length = 206 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 119/199 (59%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + ++ L++S F + +HQVVVA A RQGT K R +V G GKKPWRQ Sbjct: 8 TITGESTGELSLSGNVFDVPLHVPAMHQVVVAQLANRRQGTHCTKGRGDVRGGGKKPWRQ 67 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 K TGRAR GS +SPIW GGVT +P+++ QKVNKK+ R A+ S LS+ +R +L+ E Sbjct: 68 KHTGRARHGSSRSPIWVGGGVTHGPKPRNYRQKVNKKVRRLAICSALSQKIRDAQLMGFE 127 Query: 123 KFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 FS+E P TK++ + + +E L+I DEN+ ++ RN+ DV I+ L+ Sbjct: 128 AFSMEKPSTKIMKGLFQSLGVEKPLVIVDHRDENISMSTRNIPGADVLHVDSINVYDLLK 187 Query: 183 FDKVVMTADAVKQVEEMLA 201 V ++A AVK++EE+ A Sbjct: 188 HGHVFISAGAVKKLEEVYA 206 >UniRef50_C6C186 50S ribosomal protein L4 n=6 Tax=Bacteria RepID=RL4_DESAD Length = 206 Score = 253 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 115/196 (58%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 K ++ ++ F ++H VV + A RQGT A KTR G G KPWRQKG Sbjct: 10 TKKEVGSMDLAPEVFEVPVKPEILHLVVRSQLAAKRQGTHATKTRGMKRGGGAKPWRQKG 69 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TGRAR+GS +SP+WR GG TF +P+D+S KVNKK+ R ALK L+ + +++++VV+ Sbjct: 70 TGRARAGSTRSPLWRGGGTTFGPQPRDYSFKVNKKVRRLALKMALTSRLSEEKMMVVKNI 129 Query: 125 SVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 + KTKL + + + LE L++ + D L L+ARN+ + + A ++ ++ Sbjct: 130 DLPEIKTKLFVEVAEALGLEKALVVVKDADNKLLLSARNIPGIKLITADQLNVYDILKAR 189 Query: 185 KVVMTADAVKQVEEML 200 ++VM +A + ++E L Sbjct: 190 QLVMLENAAQDLQERL 205 >UniRef50_C1KZH9 50S ribosomal protein L4 n=21 Tax=Bacteria RepID=RL4_LISMC Length = 207 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 87/193 (45%), Positives = 129/193 (66%), Gaps = 1/193 (0%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 +T+++T FG + NE +V V+++ A RQGT K R+EV G G+KPWRQKGTGRAR Sbjct: 15 GEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRAR 74 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 GSI+SP WR GGV F P+ ++ K+ KK+ R A+KSILS V +++L+V+E + +AP Sbjct: 75 QGSIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDAP 134 Query: 130 KTKLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 KTK A LK+++++ LI+ EN+ L+ARNL + V A I + + DK+++ Sbjct: 135 KTKEFAAFLKNISVDTKALIVVAGESENVELSARNLQGITVIPAESISVLEVAKHDKLII 194 Query: 189 TADAVKQVEEMLA 201 T AV++VEE+LA Sbjct: 195 TKAAVEKVEEVLA 207 >UniRef50_B0RZU1 50S ribosomal protein L4 n=32 Tax=Bacteria RepID=RL4_FINM2 Length = 207 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 83/196 (42%), Positives = 129/196 (65%), Gaps = 1/196 (0%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + L ++E FG D NE +V++VV A RQGT++ KTR+EV G G+KPWRQKGT Sbjct: 11 GENVGELELNEAIFGVDVNEHVVYEVVKNQLANKRQGTQSAKTRSEVRGGGRKPWRQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR GSI+SP WR GGV FA +P+D+S V KK+ R A+KS+L+E V + +IV++K + Sbjct: 71 GRARQGSIRSPQWRGGGVVFAPKPRDYSYAVPKKVRRLAIKSVLTEKVNDNEMIVLDKLN 130 Query: 126 VEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 ++A TK + LK++ + L++ + D+ L+ + RN+ V + +A I+ + ++ Sbjct: 131 LDAISTKKAVEVLKNIKADKKALVVIDKNDDTLYRSFRNIENVAICEAKLINVYDCLKYN 190 Query: 185 KVVMTADAVKQVEEML 200 +V+T DAVK +EE+ Sbjct: 191 SLVITTDAVKILEEVF 206 >UniRef50_C9M934 Ribosomal protein L4/L1 family protein n=2 Tax=Synergistaceae RepID=C9M934_9BACT Length = 207 Score = 247 bits (631), Expect = 2e-64, Method: Composition-based stats. Identities = 83/196 (42%), Positives = 116/196 (59%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + L +S+ FG F+ + +HQVVVA A ARQGT K R EV G G+KPWRQK T Sbjct: 11 GEVVGDLELSDAVFGVPFHSSAIHQVVVAQQANARQGTACAKDRGEVRGGGRKPWRQKHT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR+GSI+SP+W GGV +P+D+ KVNKK+ A++S LS + RL VE FS Sbjct: 71 GRARAGSIRSPLWAGGGVVHGPKPRDYFLKVNKKVRALAMRSALSVRAGESRLFAVEGFS 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 +EAP TK + L + LI+ +EN+ +A N+ V V I+ + L+ D Sbjct: 131 LEAPSTKKMLSFLAAVGARKPLIVLDSRNENVIRSAANIQGVKVLHMDSINVLDLVRHDG 190 Query: 186 VVMTADAVKQVEEMLA 201 +V T +K++EE+ A Sbjct: 191 LVATTAVLKRLEEVYA 206 >UniRef50_B8I7Y0 50S ribosomal protein L4 n=33 Tax=Firmicutes RepID=RL4_CLOCE Length = 207 Score = 246 bits (630), Expect = 2e-64, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + + +S+ FG D N+ +H VVV A RQGT++ KT++EV G GKKPWRQK Sbjct: 9 MKGEVVGDIQLSDNVFGTDVNKDALHAVVVNQLANRRQGTQSTKTKSEVRGGGKKPWRQK 68 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRAR GSI+S W GG+ +P+ + + KK+ R A+KS L+ V + + V++ Sbjct: 69 GTGRARQGSIRSAQWVKGGIVLGPKPRSYRYTLPKKVKRIAMKSALTSKVSGNEIFVLDA 128 Query: 124 FSVEAPKTKLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 +++A KTK + L ++ ++ L++ +EN+ +ARN+ + ++ ++ Sbjct: 129 LALDAIKTKSMVGVLNNLKVDSSALLVIDSKNENIVKSARNIPGIKTAYVNTLNVFDILK 188 Query: 183 FDKVVMTADAVKQVEEMLA 201 +DK ++T DAV++VEE+ A Sbjct: 189 YDKFIITKDAVEKVEEVYA 207 >UniRef50_Q034Y4 50S ribosomal protein L4 n=209 Tax=Bacteria RepID=RL4_LACC3 Length = 207 Score = 246 bits (628), Expect = 4e-64, Method: Composition-based stats. Identities = 77/195 (39%), Positives = 121/195 (62%), Gaps = 1/195 (0%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 + +++ + + NE +V VV RQGT A K R+ V+G G+KPWRQKGTGR Sbjct: 13 ENGKVELNDAIWAVEPNENVVFDAVVMQRDSLRQGTHAVKNRSAVSGGGRKPWRQKGTGR 72 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR GSI+SP WR GG+ F P+ ++ K+ KK+ R A+KS+LS+ V L+VV+ + + Sbjct: 73 ARQGSIRSPQWRGGGIVFGPTPRSYAYKLPKKVRRLAIKSVLSQKVLDSDLVVVDGLNFD 132 Query: 128 APKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 APKTK A L + + + L++ + +E AARNL V V A GI+ + ++ + K+ Sbjct: 133 APKTKAFATVLDGLKVSDKALVVLEDGNEVAAKAARNLPNVKVVPAEGINVLDVVDYKKL 192 Query: 187 VMTADAVKQVEEMLA 201 ++T A++++EE+LA Sbjct: 193 ILTQSALQKIEEVLA 207 >UniRef50_Q21M56 50S ribosomal protein L4 n=42 Tax=Bacteria RepID=RL4_SACD2 Length = 204 Score = 243 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 136/203 (66%), Positives = 168/203 (82%), Gaps = 3/203 (1%) Query: 1 MELVL---KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGK 57 MEL + + A+ ++VSE FGR+FN+ LVHQ VVA+ AGARQGT+AQK RA V+G GK Sbjct: 1 MELSIATPQGAKGTVSVSEAAFGREFNQDLVHQAVVAFMAGARQGTKAQKNRAAVSGGGK 60 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 KPWRQKGTGRAR+G+I+SP+WRSGGVTFAA P+DHSQK+NKKMYR A++ ILSEL RQ+R Sbjct: 61 KPWRQKGTGRARAGTIRSPLWRSGGVTFAAEPRDHSQKLNKKMYRAAIRCILSELARQER 120 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 L+VVE+F ++APKTK L QKL L DVLII ++ ENL+LAARNLHKVDVRD G+DP Sbjct: 121 LVVVEEFDLDAPKTKDLVQKLAQFDLADVLIIGEDVSENLYLAARNLHKVDVRDVNGLDP 180 Query: 178 VSLIAFDKVVMTADAVKQVEEML 200 VSLI FDKVV+T A+K++EE+L Sbjct: 181 VSLIRFDKVVVTVAALKKLEEVL 203 >UniRef50_A3DJH3 50S ribosomal protein L4 n=16 Tax=Clostridiales RepID=RL4_CLOTH Length = 208 Score = 242 bits (618), Expect = 7e-63, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 119/200 (59%), Gaps = 2/200 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + + + FG + N+ +HQV+V A RQGT++ KT++EV G G+KPWRQK Sbjct: 9 INGKVVGEINLRDDIFGIEVNKHAIHQVIVNQLANRRQGTQSTKTKSEVRGGGRKPWRQK 68 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRAR GSI+S W GG+ +P+ + V KK+ R ALKS LS V ++ L+V++ Sbjct: 69 GTGRARHGSIRSAQWVKGGIALGPKPRSYKYAVPKKLRRLALKSALSSKVNENELLVLDS 128 Query: 124 FSVEAPKTKLLAQKLKDMALEDVL--IITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 + + KTK +A LK++ + D ++ + + N+ L+ARN+ + ++ +I Sbjct: 129 LNFDEIKTKQMANVLKNLKVNDTTAVLVLADKNRNVELSARNIPGLKTLFVNTMNVYDII 188 Query: 182 AFDKVVMTADAVKQVEEMLA 201 DK ++T DAV +VEE+ A Sbjct: 189 RHDKFIITKDAVAKVEEVYA 208 >UniRef50_C5BQ62 50S ribosomal protein L4 n=266 Tax=Gammaproteobacteria RepID=RL4_TERTT Length = 204 Score = 241 bits (617), Expect = 7e-63, Method: Composition-based stats. Identities = 135/204 (66%), Positives = 168/204 (82%), Gaps = 3/204 (1%) Query: 1 MELVL---KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGK 57 MEL + + A+ + VSE FG++FN+ LVHQ VVAY AG+RQGT+AQK RA V+G GK Sbjct: 1 MELSIVTPQGAKGTVAVSEVAFGKEFNQDLVHQAVVAYMAGSRQGTKAQKNRAAVSGGGK 60 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 KPWRQKGTGRAR+G+I+SPIWRSGGVTFAA+P+D QK+NKKMYR AL+ ILSEL RQ+R Sbjct: 61 KPWRQKGTGRARAGTIRSPIWRSGGVTFAAQPRDFEQKLNKKMYRAALRCILSELARQER 120 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 L+VVE+F ++APKTK+L QKL + L D LI++ ++ ENL+LAARNLHKVDVRD IDP Sbjct: 121 LVVVEEFDLDAPKTKILVQKLAEYDLTDALIVSEQVSENLYLAARNLHKVDVRDVQAIDP 180 Query: 178 VSLIAFDKVVMTADAVKQVEEMLA 201 VSLI F+KVVMT AVK++EE+LA Sbjct: 181 VSLIRFEKVVMTVSAVKKLEEVLA 204 >UniRef50_A5FRZ0 50S ribosomal protein L4 n=5 Tax=Dehalococcoides RepID=RL4_DEHSB Length = 210 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 5/206 (2%) Query: 1 MELVLKDAQSALT----VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME+ + +A + +SE FG FNEALVHQ VA A ARQGT++ KTR EV GS Sbjct: 1 MEIPVYNASGEIVKNINISEDVFGVPFNEALVHQAFVAQQANARQGTQSTKTRGEVQGSS 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 +K +RQKGTG AR G+ +SP+ R GGV F RP+D S+ + KKM R A++ +LS + Sbjct: 61 RKIYRQKGTGNARMGTNRSPVRRHGGVAFGPRPRDFSKDLPKKMRRQAIRCVLSFKLESG 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMA-LEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 L V+++ S + PKT+ +A+ L + + LI D N +ARN+ V A + Sbjct: 121 ELKVIDQLSFDEPKTRDMAKILTALQVISPTLIAVDNPDTNFIKSARNIPAVKTTPANLL 180 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + ++ ++VMT +AV+QVEE+ Sbjct: 181 NISDMLKNKQLVMTEEAVRQVEELWG 206 >UniRef50_Q8VY61 50S ribosomal protein L4 n=18 Tax=Magnoliophyta RepID=Q8VY61_ARATH Length = 300 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 112/195 (57%), Gaps = 2/195 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + + ++ F + ++H VV A +QGT + KT +EV+G+G+KPW QKGTG Sbjct: 99 EEKGFMVLAGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTG 158 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR G+++ P +R G V +P+ H+ K+NK++ R LK L+ + +L+V + + Sbjct: 159 RARHGTLRGPQFRGGCVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGL 218 Query: 127 EAPKTKLLAQKLKDM-ALEDVLIITGEL-DENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 KTK + M + VL++ G DE L LA +NLH V++ + G++ S++ D Sbjct: 219 PTHKTKNIVNYYNQMENTKKVLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHD 278 Query: 185 KVVMTADAVKQVEEM 199 ++M+ DAV ++ E Sbjct: 279 TLLMSRDAVNKIVER 293 >UniRef50_A9UV13 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UV13_MONBE Length = 229 Score = 240 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 2/194 (1%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + + T FG + ++H+VVV A R+G KTR EV G G+KP QKGTGRA Sbjct: 13 VGVMELDPTVFGEEIRVDIMHRVVVWQRALWRKGNAKTKTRGEVRGGGRKPHPQKGTGRA 72 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R+GSI+ P WR GGV P+D SQK+ +K+ + ++ +S +Q+ L++V+ + Sbjct: 73 RTGSIRVPNWRGGGVVHGPIPRDWSQKLPRKVRQKGVRVAISTRYQQNDLVIVDDLVLPT 132 Query: 129 PKTKLLAQKLKDMALEDVLII--TGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 KTK LA+ LE L + E NL A RN+ A G +++ DK+ Sbjct: 133 LKTKSLAEIAAQHRLESALFVYGHDEDSMNLKWACRNMPAFHATSAAGAHVYNILKHDKL 192 Query: 187 VMTADAVKQVEEML 200 V++ AV+ +E L Sbjct: 193 VLSVSAVRDLERRL 206 >UniRef50_Q30Z43 50S ribosomal protein L4 n=8 Tax=Bacteria RepID=RL4_DESDG Length = 206 Score = 240 bits (613), Expect = 2e-62, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 115/195 (58%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K LT++ F + +++ VV A A R GT + KTR+ ++G G KPWRQKGT Sbjct: 11 KKETGELTLAPEVFEVEVRPEILNLVVRAQRAAKRAGTHSVKTRSTISGGGAKPWRQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRARSGS +SP+WR G V F +P+D+S KVNKK+ + ALK LS + ++ L+VV+ Sbjct: 71 GRARSGSNRSPVWRGGAVVFGPQPRDYSFKVNKKVRKLALKMALSSRLAEENLMVVKGIE 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + KTK + + + L L++T E+D+ L L+ARN+ + + + ++ + Sbjct: 131 LPEVKTKHMVKVAGALGLGKALVVTPEMDDKLVLSARNIPGITLMTPEQLSVFEILKHAQ 190 Query: 186 VVMTADAVKQVEEML 200 +V+ AV+ V+E L Sbjct: 191 LVLLEGAVEPVQERL 205 >UniRef50_A7RJ96 Predicted protein n=2 Tax=Metazoa RepID=A7RJ96_NEMVE Length = 299 Score = 240 bits (613), Expect = 2e-62, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 107/199 (53%), Gaps = 1/199 (0%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + + +++ FG + ++H+VVV A R GT K R+EV G G+KPW Q Sbjct: 91 FKDDKSLGMIELNDFVFGENPRIDILHRVVVWQRAKRRAGTACVKDRSEVRGGGRKPWPQ 150 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KG +AR GSI++P +R GGV +P+ + + KK+ R L+ LS + Q L +VE Sbjct: 151 KGLNKARQGSIRAPHFRGGGVVHGPKPRSYEYTLPKKVRRMGLRVALSVRLAQGDLHIVE 210 Query: 123 KFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 F + + L L + +++ G +E LF AA +L KVDV + ++ S++ Sbjct: 211 SFD-DIEDDQDLMPILDQRGWQSAVLVDGSPNERLFEAAADLDKVDVFYSENVNVYSILL 269 Query: 183 FDKVVMTADAVKQVEEMLA 201 ++++ DAVKQ+EE L Sbjct: 270 RHNLILSLDAVKQLEERLG 288 >UniRef50_B2V7L2 Ribosomal protein L4/L1e n=4 Tax=Hydrogenothermaceae RepID=B2V7L2_SULSY Length = 208 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 6/207 (2%) Query: 1 MELVLKDAQ----SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME + + + + + E F + N+ V +V+ + A R GT + KTRAEV GS Sbjct: 1 MEFNVVNNKNEVIGKINLKEDIFKTEVNQGTVWEVIKWHLASKRAGTASTKTRAEVAGSN 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 +K + QKGTGRAR G IK+ I+ GGV P+D+ + KK+ R LK +L+ + + Sbjct: 61 RKIYPQKGTGRARHGDIKANIFVGGGVAHGPHPRDYYFALPKKVRRKVLKGVLTYKLNNN 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATG 174 LIVV+ F+ EAPKTK + LK LE VL++ E EN+ + RN+ KV + A G Sbjct: 121 ELIVVDDFNFEAPKTKNAIEVLKSFGLENSKVLLVLPEKLENVIKSFRNIPKVKILLAEG 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEMLA 201 I+ ++ DKV++ A+++++E LA Sbjct: 181 INSYDVLNNDKVIIFKSALEKIQERLA 207 >UniRef50_D0MYG7 50S ribosomal protein L4 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MYG7_PHYIN Length = 277 Score = 239 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 1/192 (0%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 ++++ FG ++ +VV A R GT KTR+EV+GS +KPW+QKG+GRAR Sbjct: 83 GSISMDGEVFGAPDRVDILQRVVRWQLACRRAGTNKTKTRSEVSGSTRKPWKQKGSGRAR 142 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 G I++P WR G +D S + KK+ L+ LS +R+ +L +V+ V+ Sbjct: 143 VGDIRAPQWRGGYRVHGPVLRDFSYSLPKKVRAMGLRVALSTKLREGKLAIVDSLDVDIT 202 Query: 130 KTKLLAQKLKDMALEDVLIITGELDE-NLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 KTK + + L + L + GE E + LA RN+ VD I+ S++ D +++ Sbjct: 203 KTKDMKKLLGGRGWDHALFVGGEEVESSFVLATRNIPHVDTLAQNKINVYSILQKDLLII 262 Query: 189 TADAVKQVEEML 200 T DAVK +EE L Sbjct: 263 TKDAVKYLEERL 274 >UniRef50_C5JB89 50S ribosomal protein L4 n=1 Tax=uncultured bacterium RepID=C5JB89_9BACT Length = 217 Score = 239 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 5/206 (2%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 +E + DA + + +S FG + L+ +VV A R GT + K R EV G G Sbjct: 2 IEFPVVDAANQTSHTVNLSSHAFGCEVRGDLLTRVVHYQLAKRRLGTASTKRRGEVRGGG 61 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KP+RQKGTG AR G+I++P +R+GGV F P+D+S K+N+K L++ LS + Sbjct: 62 HKPYRQKGTGNARQGTIRAPQYRTGGVVFGPHPRDYSVKMNRKERALGLRTALSAKREAE 121 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMA-LEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 LIV+ F + KT+ + Q L + VLI+ E DE + +ARNL VDV G+ Sbjct: 122 ELIVLTDFGLTEIKTRSMLQVLTRLNAANSVLIVLPESDERIERSARNLPGVDVIQVDGV 181 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + L+ +K++MT A++++E +A Sbjct: 182 NVYDLLVHEKLLMTEAALQKLEARVA 207 >UniRef50_Q2LQA0 50S ribosomal protein L4 n=12 Tax=Bacteria RepID=RL4_SYNAS Length = 217 Score = 238 bits (609), Expect = 6e-62, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 122/197 (61%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + K+ S + +++ FG + N+A+++ VV A R GT A K R++V+G GKKPWRQK Sbjct: 19 INKNKVSEIELNDAVFGAEVNDAVIYDVVRMQMASRRFGTAATKGRSDVSGGGKKPWRQK 78 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRARSG+ +SPIWR GG+ F P+D+ V KK+ + AL+S+LS + +L+V++ Sbjct: 79 GTGRARSGTSRSPIWRGGGIVFGPVPRDYKYNVPKKVRKNALRSVLSLKYQGQKLVVLKD 138 Query: 124 FSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 F ++ KTK + + L+ L +T E +E L ++RN+ + + + G++ ++ Sbjct: 139 FPLDEIKTKKFKEVVDRFGLKKALFVTEERNEFLEKSSRNIAGIKMVRSEGLNVYDVLNH 198 Query: 184 DKVVMTADAVKQVEEML 200 + +V+ AVK++E L Sbjct: 199 EHLVIIEPAVKKLEGAL 215 >UniRef50_C0Q9X2 50S ribosomal protein L4 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=RL4_DESAH Length = 207 Score = 238 bits (609), Expect = 7e-62, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 111/196 (56%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 + S +++ F ++++H VV A R GT K R+EV+GS +K +RQKG Sbjct: 10 SGEKVSEAFLADEVFSIPVKKSVLHDVVRMQLARRRSGTAKSKGRSEVSGSTRKLYRQKG 69 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TG ARSGS+KSP+ R GGV F P+ ++ + KK+ ALK LS + + L V++ F Sbjct: 70 TGNARSGSVKSPLRRGGGVIFGPAPRSYAYAIPKKVRALALKMALSSKLAANELSVIDTF 129 Query: 125 SVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 ++++ KTK + + L++ LI+ D NL L+ARN+ V V G++ ++ +D Sbjct: 130 AMDSIKTKEFDSIIDHLGLKNTLIVIDGDDRNLVLSARNIPDVKVIRTEGLNVYDILKYD 189 Query: 185 KVVMTADAVKQVEEML 200 +++ A+K++E Sbjct: 190 NLLLIESAIKEIEGRF 205 >UniRef50_A9T3B9 Predicted protein n=3 Tax=Embryophyta RepID=A9T3B9_PHYPA Length = 269 Score = 236 bits (603), Expect = 3e-61, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 3/197 (1%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 + + T++ F +VH+VV A RQGT + K EV+G+G+KP QKG+G Sbjct: 67 EDKGLATLAGDVFDVPIRPDVVHRVVRWQLAKRRQGTASTKGIHEVSGTGRKPGPQKGSG 126 Query: 67 RARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV 126 RAR GS++ P +R G +P+ H + K++ R LK LS V + +L V + Sbjct: 127 RARHGSLRGPQFRGGATQHGPKPRSHEIGLQKQVRRLGLKVALSSRVAEGKLKVFDSVEP 186 Query: 127 EAPKTKLLAQKLKDM-ALEDVLIITG--ELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 KT+ + + + D+ + VLI+ ++E+L A NLH V+V A G++ S++ Sbjct: 187 PTLKTREMERLIADIEGCKKVLIVDDAETVNESLCRATGNLHYVNVLPAKGLNVYSILQH 246 Query: 184 DKVVMTADAVKQVEEML 200 D +VM+ A++++EE L Sbjct: 247 DTLVMSVGAIRRIEERL 263 >UniRef50_D1CFC7 Ribosomal protein L4/L1e n=2 Tax=Bacteria RepID=D1CFC7_THET1 Length = 223 Score = 235 bits (601), Expect = 5e-61, Method: Composition-based stats. Identities = 83/206 (40%), Positives = 124/206 (60%), Gaps = 6/206 (2%) Query: 1 MELVLKDAQSAL----TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L + + + VS+ FG N A++HQ +V A AR GT +TRAEV+G G Sbjct: 1 MQLPVYNLNGDIVSQLEVSDLVFGIQPNLAVMHQALVRQLANARTGTHDTRTRAEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 +KPWRQKGTGRAR GSI++P WR GGV F P+ + Q++ +KM R AL+S LS+ V ++ Sbjct: 61 RKPWRQKGTGRARQGSIRAPQWRGGGVVFGPHPRSYEQRMPRKMRRLALRSALSQKVAEE 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATG 174 RL+VV S P+TK + L+ + L + VLI T +E++ A NL V V A+ Sbjct: 121 RLLVVTGLSEIEPRTKAMIAALEKLGLAGQKVLIATNGRNESVQKAGSNLPNVKVIHASN 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEML 200 ++ L+ +D + + AV ++E+L Sbjct: 181 LNIADLLKYDYLFLEDGAVNSLQEIL 206 >UniRef50_Q03ZP4 50S ribosomal protein L4 n=19 Tax=Firmicutes RepID=RL4_LEUMM Length = 207 Score = 235 bits (601), Expect = 6e-61, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 124/192 (64%), Gaps = 1/192 (0%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 + +++ F + N A++ V+ A RQGT A K R+ V+G G+KPW+QKGTGRAR+ Sbjct: 16 EIELNDAVFAIEPNNAVITDAVLMQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRARA 75 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 GSI+ P +R GG+ F P+ ++ ++N+K Y+ ALKS+LS+ V ++L+VV+ S EAPK Sbjct: 76 GSIREPQFRGGGIVFGPSPRSYAYRINRKAYQLALKSVLSQKVADNKLVVVDALSFEAPK 135 Query: 131 TKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 T+ + L +++ + L++ E +EN L+ARNL V V GI+ + ++ DK+V+ Sbjct: 136 TQDFKKVLANLSADKKTLVVVDEDNENAILSARNLANVQVMTTKGINVLDVVNADKLVIV 195 Query: 190 ADAVKQVEEMLA 201 ++++++ LA Sbjct: 196 QSSIEEIQGGLA 207 >UniRef50_D1AWK4 Ribosomal protein L4/L1e n=7 Tax=Fusobacteriaceae RepID=D1AWK4_STRM9 Length = 214 Score = 235 bits (599), Expect = 9e-61, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 125/204 (61%), Gaps = 6/204 (2%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + + TVS FG + N+ ++H+V+ A A +R GT + KTR EV+G G+KP+RQK Sbjct: 11 LNGEEKGVTTVSSEIFGLEPNKYVMHEVLTAELAASRAGTASTKTRGEVSGGGRKPFRQK 70 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRAR GS ++P GGV +P+++ +KVNKK+ + ALKS L+ ++ +IV+E Sbjct: 71 GTGRARQGSTRAPHMVGGGVVHGPKPRNYDKKVNKKVRKLALKSALAVRIQNGDVIVLED 130 Query: 124 FSVEAPKTKLLAQKLKDMAL--EDVLIIT----GELDENLFLAARNLHKVDVRDATGIDP 177 + ++ PKTK + + + + L I + D NL+L+ RN+ K ++ D + Sbjct: 131 YMLDTPKTKAFVNFTEKVNMVEDKKLFIVNDYLEDADWNLYLSVRNIEKTEILDPRELSV 190 Query: 178 VSLIAFDKVVMTADAVKQVEEMLA 201 +L+ F+KVV+T +A+ +EE+L Sbjct: 191 YALLKFNKVVITKEALATIEEVLG 214 >UniRef50_A9NED4 50S ribosomal protein L4 n=11 Tax=Bacteria RepID=RL4_ACHLI Length = 207 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 84/196 (42%), Positives = 124/196 (63%), Gaps = 1/196 (0%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + S + +++ FG N+ +++ VV A A RQGT KTRAEV G GKKPWRQKGT Sbjct: 11 GEKISEVALNDAIFGITPNQQVLYDVVNAQRAALRQGTAKTKTRAEVRGGGKKPWRQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR GSI+SP WR GG+ F P+ ++ KVN+K+ + ALKS LS V + L++V+ + Sbjct: 71 GRARQGSIRSPQWRGGGIVFGPIPRSYAVKVNQKVKQLALKSALSYHVLAENLVLVDNIT 130 Query: 126 VEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 V PKTKL + + ++ L + +++ +D+NL LA+ NL VR+ + + L+ F Sbjct: 131 VAEPKTKLFIEIMNNLKLDDRSIVLVDSVDKNLLLASNNLPGAVVREVSQVSVYELLKFK 190 Query: 185 KVVMTADAVKQVEEML 200 +VV+T AVK EE+L Sbjct: 191 QVVLTQGAVKYYEEVL 206 >UniRef50_A0L5X4 50S ribosomal protein L4 n=1 Tax=Magnetococcus sp. MC-1 RepID=RL4_MAGSM Length = 207 Score = 232 bits (593), Expect = 4e-60, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 122/206 (59%), Gaps = 5/206 (2%) Query: 1 MELVLKDA----QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 +++ +KDA + ++E+ FGR+ L+ V A R GT R++V G G Sbjct: 2 IQVPVKDANNQEVRSTELNESVFGREIRADLLGMAVNYQLAKRRLGTATVLGRSDVRGGG 61 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKP+RQKGTG AR G+I++P +R+GG+ F + +D+S K+NKK+ + AL++ LS + Sbjct: 62 KKPYRQKGTGNARQGTIRAPQFRTGGIVFGPQQRDYSHKLNKKVRKLALQTALSVKASSE 121 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMA-LEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 ++VV+K + + KTK + L + ++ EL + L+ARN+ V V D G+ Sbjct: 122 EMVVVDKLELASIKTKEMKALLSTLGAARSTFLVVKELSNEIVLSARNIPNVMVADVDGV 181 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + L+ ++K+V+T +AV+ +EE LA Sbjct: 182 NVYDLLRYEKLVITEEAVRSLEEKLA 207 >UniRef50_B4JAB3 GH11428 n=2 Tax=Coelomata RepID=B4JAB3_DROGR Length = 923 Score = 232 bits (593), Expect = 5e-60, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ V + + + F ++ + + KTRAEV G G+KPW Sbjct: 699 VDAVKERKVGMMELHPDVFAAQPRVDIIQENIEWQRKYRYVSMAHTKTRAEVRGGGRKPW 758 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKG GRAR GSI+SP+++ GG+ R P H + L S LS + QD L Sbjct: 759 PQKGMGRARHGSIRSPLFKGGGIVHGPRSPTSHFYMLPFYTRVLGLTSTLSVKLAQDDLH 818 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALE-DVLIITGEL--DENLFLAARNLHKVDVRDATGID 176 ++E + + + + + VLII + EN+ A ++ V++ + G++ Sbjct: 819 IIENVELPTRDAQFIRDLIAERNWGPSVLIIDKQEMFPENICYATDSIGYVNLMPSFGLN 878 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 S++ D +V+T +AVK +E+ L Sbjct: 879 VYSMLKHDTLVLTVEAVKHLEQRL 902 >UniRef50_B4KI26 GI14673 n=2 Tax=Drosophila RepID=B4KI26_DROMO Length = 911 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ V + + + F ++ + + KTRAEV G G+KPW Sbjct: 687 VDAVTERKVGLMELHPDVFAAQPRVDVIQENIEWQRKYRYVSMAHTKTRAEVRGGGRKPW 746 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKG GRAR GSI+SP+++ GGV R P H + L S LS + QD L Sbjct: 747 PQKGMGRARHGSIRSPLFKGGGVIHGPRSPTTHFYMLPFYKRVMGLTSTLSVKLAQDDLH 806 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALE-DVLIIT--GELDENLFLAARNLHKVDVRDATGID 176 ++E + + + +++ VLI+ EN+ A ++ V++ A G++ Sbjct: 807 IIEDVEIPTKDAQFIRDLIQERNWGPSVLIVDKHDVFPENICYATDSIGYVNLMPAYGLN 866 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 S++ D +V+T +AVK +EE L Sbjct: 867 VYSMLKHDTLVLTVEAVKHLEERL 890 >UniRef50_Q02W25 50S ribosomal protein L4 n=145 Tax=Bacteria RepID=RL4_LACLS Length = 208 Score = 231 bits (591), Expect = 8e-60, Method: Composition-based stats. Identities = 77/194 (39%), Positives = 119/194 (61%), Gaps = 2/194 (1%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 +T++++ FG + NE++V VV++ A RQGT A K R+ V+G GKKPWRQKGTGRAR Sbjct: 15 GEVTLNDSVFGIEPNESVVFDVVISQRASLRQGTHAHKNRSAVSGGGKKPWRQKGTGRAR 74 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 GS +SP WR GG F P+ ++ K+ +K+ + ALKS+ S V +LI V+ AP Sbjct: 75 QGSTRSPQWRGGGTVFGPNPRSYAYKLPQKVRQLALKSVYSTKVADGKLIAVDTLDFAAP 134 Query: 130 KTKLLAQKLKDMAL-EDVLIITGEL-DENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 KT A+ + +++ VL++ +E L+ARNL V V A + +++ DK++ Sbjct: 135 KTAEFAKVISALSIERKVLVVLPNEGNEFAELSARNLENVKVTTANSASVLDIVSADKLL 194 Query: 188 MTADAVKQVEEMLA 201 + A+ Q+EE+LA Sbjct: 195 VVQSALTQIEEVLA 208 >UniRef50_A8IAS4 Ribosomal protein L4/L1e n=4 Tax=Alphaproteobacteria RepID=A8IAS4_AZOC5 Length = 207 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 1/201 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ + ++ +S+ FG + ++H++V A + GT K R+E+ + KK + Sbjct: 6 VKTLDGAEAGSIQLSDAIFGLEPRADILHRMVTWQLARRQAGTHRTKGRSEINRTSKKLY 65 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 +QKGTG AR G+ +P +R GG F + H+ + KK+ ALK LS + +++IV Sbjct: 66 KQKGTGNARHGAASAPQFRGGGRAFGPVVRSHAFDLPKKVRALALKHALSSKAKAEQIIV 125 Query: 121 VEKFSVEAPKTKLLAQKLKDMALEDVLIITGE-LDENLFLAARNLHKVDVRDATGIDPVS 179 ++ ++ KTK L ++ + + + VL++ GE + N LAARNL VDV GI+ Sbjct: 126 LDAATLTDAKTKALKERFEKLGIASVLVVDGEQVATNFALAARNLASVDVLPVQGINVYD 185 Query: 180 LIAFDKVVMTADAVKQVEEML 200 ++ D +V+T AV +E Sbjct: 186 ILRRDTLVLTRAAVDALEARF 206 >UniRef50_Q1Q137 Strongly similar to 50S ribosomal protein L4 n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q137_9BACT Length = 203 Score = 229 bits (584), Expect = 5e-59, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 114/202 (56%), Gaps = 6/202 (2%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME+++ + + + V ++ L+ VV Y A RQGT + KTRAEV+G G Sbjct: 1 MEIIVYNDEGKKIENMQVPDSISDSPVRYKLLRDVVKMYEANKRQGTVSTKTRAEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPW QK TG+AR+GS +SPIWR GGV F +P+D+S + K + AL S LS ++ + Sbjct: 61 KKPWAQKHTGKARAGSSRSPIWRGGGVAFGPKPRDYSYSIPKMAKKQALFSALSSKIKDN 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATG 174 ++VV+K +PKTK + LK + LI+ + E+L ++RN+ V + + Sbjct: 121 EVVVVDKLDFASPKTKHMVSLLKSFGMVGISSLIVISKATESLLKSSRNIPYVRMMECHD 180 Query: 175 IDPVSLIAFDKVVMTADAVKQV 196 ++ ++ K+++T A+ + Sbjct: 181 LNAYEILKPKKILITKQALSSL 202 >UniRef50_Q110A8 50S ribosomal protein L4 n=17 Tax=Cyanobacteria RepID=RL4_TRIEI Length = 212 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 118/201 (58%), Gaps = 7/201 (3%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + T++ + +VH+ + A RQGT + KTR+EV G G+KPWRQKGT Sbjct: 11 GEEVGQATLNLRVAKEESAAHIVHRSLRLQMANNRQGTASTKTRSEVRGGGRKPWRQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR+GSI+SP+WR GGV F +P+D+S K+N+K R AL + R + LIV+E S Sbjct: 71 GRARAGSIRSPLWRGGGVIFGPKPRDYSHKMNRKEKRLALSTAFQS--RSEDLIVIEDLS 128 Query: 126 --VEAPKTKLLAQKLKDMALE---DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 PKTK L Q + ++ ++++ E EN++L+ RN+ K+ + A ++ + Sbjct: 129 EQFTKPKTKELVQAITRWGIDIQAKIVLVLPEKQENVYLSGRNIAKLKIILANNLNIYDI 188 Query: 181 IAFDKVVMTADAVKQVEEMLA 201 +A DK++ T A+ +++E+ Sbjct: 189 LAADKIIATVTAIAKIQEVYG 209 >UniRef50_P10135 50S ribosomal protein L4 n=9 Tax=Bacteria RepID=RL4_MYCCT Length = 208 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 127/208 (61%), Gaps = 7/208 (3%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L + D + + +++ +G + ++ ++ V++ A RQGT+ KTRAEV+G G Sbjct: 1 MKLQVLDTKGNEIKEIALNDYVWGIEPHQQAIYDTVISQQAALRQGTKKVKTRAEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQ 115 +KPW+QKGTGRAR GSI++P W+ GGVTF P ++ + VNKK+ A +S+LS V++ Sbjct: 61 RKPWKQKGTGRARQGSIRAPQWKGGGVTFGPTPDINYKKSVNKKVRALAFRSVLSLKVKE 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDAT 173 + L++V+KF P TK + +K++ ++ LI+T E +E + ++ N+ V A Sbjct: 121 NNLVIVDKFDFAKPSTKEMVVVMKNLKIDDQKTLIVTKEKEELVVKSSNNITGVKTISAN 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEMLA 201 ++ L+ K+++T +A VEE+ A Sbjct: 181 QLNVFDLLNATKLLITEEAAIAVEEVYA 208 >UniRef50_D2SHA2 Ribosomal protein L4/L1e n=2 Tax=Actinobacteria (class) RepID=D2SHA2_9ACTO Length = 292 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 2/198 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + + ++T+ F N +L+HQVVVA A ARQGT A KTR +V+G G KP+ Sbjct: 20 VRTPAGETSGSVTLPGELFDASANVSLMHQVVVAQLAAARQGTHATKTRGQVSGGGIKPY 79 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTGRAR GSI++P + GG +P+D+SQK KKM AL+ LS+ R++R+ V Sbjct: 80 RQKGTGRARQGSIRAPQFTGGGTVHGPQPRDYSQKTPKKMKAAALRGALSDRARENRVHV 139 Query: 121 VEKF-SVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 V F +AP+TK L+ + + VL++ D +++ RN+ +V + +A ++ Sbjct: 140 VSTFVDGDAPRTKAALATLESITRAKRVLVVLDRDDVLNWVSLRNVPQVHLLEAGQLNTY 199 Query: 179 SLIAFDKVVMTADAVKQV 196 ++ D+VV T A+ + Sbjct: 200 DVLVADEVVFTEAALAEF 217 >UniRef50_B5YG46 50S ribosomal protein L4 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RL4_THEYD Length = 210 Score = 226 bits (576), Expect = 5e-58, Method: Composition-based stats. Identities = 77/195 (39%), Positives = 116/195 (59%), Gaps = 2/195 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + V + F +E++VH VVAY A RQGT KTR+EV+G GKKPWRQK Sbjct: 9 INNNIVGKKEVPDIVFNNSASESVVHTAVVAYMANQRQGTHCTKTRSEVSGGGKKPWRQK 68 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 TGRAR GSI+SP+WR GG+ F +P+D+ ++ K+M AL L+ R + +++++ Sbjct: 69 HTGRARHGSIRSPLWRKGGIVFGPKPRDYYIQLPKQMKDTALFKALTMKYRDNEILLLDN 128 Query: 124 FSVEAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 S+ KTK + + LK++ LE VLI E DE + L+ARN+ + V A ++ + Sbjct: 129 LSLNRIKTKDMVEILKNLQLEESSVLIALPEKDEKVLLSARNIPYIGVVRAEDLNAYHVA 188 Query: 182 AFDKVVMTADAVKQV 196 FDKVV T + ++ Sbjct: 189 MFDKVVFTVAGLDKL 203 >UniRef50_B8IYH3 50S ribosomal protein L4 n=6 Tax=Desulfovibrionales RepID=RL4_DESDA Length = 210 Score = 225 bits (574), Expect = 7e-58, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 106/196 (54%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 K +T++ F + +++ V A A R GT KTRA V+G G KPW+QKG Sbjct: 10 NKQESGEVTLASDVFEIEVRPEILNLVARAQMAAKRAGTHNVKTRAFVSGGGAKPWKQKG 69 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TGRAR+GS +SPIWR G +TF P+D++ KVN K+ ALK LS + + L+VV+ Sbjct: 70 TGRARAGSNRSPIWRGGAITFGPSPRDYTFKVNSKVRSLALKMALSSRLAAESLMVVKGI 129 Query: 125 SVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 + KTK A+ + L LI+ E + +L +ARN+ + + + + ++ Sbjct: 130 VLPEAKTKHFAKVADTLGLTKALIVAPEENADLTRSARNIPGLTLTTVDRLSVLEILKHK 189 Query: 185 KVVMTADAVKQVEEML 200 ++V+ AV+ V+ Sbjct: 190 QLVLLEGAVESVQARF 205 >UniRef50_A6GCH8 50S ribosomal protein L4 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCH8_9DELT Length = 218 Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 104/197 (52%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + + + VS+ F + E L+ +VV A R GT K R+EV G+ K +RQK Sbjct: 9 LEGNDVAEIEVSDEVFAAEVKEHLLWEVVRWQRAKKRAGTAKTKERSEVHGTRSKMYRQK 68 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTG AR GS + ++R GG RP+D++ VNKK GAL+S LS + L+V+ Sbjct: 69 GTGNARHGSRRVNVFRGGGQVHGPRPRDYTFSVNKKARAGALRSALSLRASEGNLVVIRD 128 Query: 124 FSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 F V KT+ LA L + L++ G + +L +ARNL G++ ++ F Sbjct: 129 FEVPDAKTRNLAAALGKLNAPKSLLVDGGDNMSLARSARNLPTAQHIVPEGVNVYDILRF 188 Query: 184 DKVVMTADAVKQVEEML 200 K++++ +++ +E L Sbjct: 189 PKLLISESSLRALEARL 205 >UniRef50_B6WX21 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WX21_9DELT Length = 207 Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 106/196 (54%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 K LT+S F + +++ VV A A R GT KTRA V+G G KPW+QKG Sbjct: 10 NKQECGELTLSADVFEVEARPEILNLVVRAQMAAKRAGTHMAKTRAFVSGGGVKPWKQKG 69 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TGRARSGS +SP+WR G + F +P+D+S KVN K+ A+K LS + + L+VV+ Sbjct: 70 TGRARSGSNRSPVWRGGAIVFGPQPRDYSFKVNSKVRALAMKMALSSRLAAENLLVVKGI 129 Query: 125 SVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 + KTK A+ + L LI+T E E L +ARN+ + + + + ++ Sbjct: 130 ELPEAKTKHFAKVAGTLGLNKALIVTAEESEALTRSARNIPGITLTTPDRLSVLEILRHK 189 Query: 185 KVVMTADAVKQVEEML 200 ++V+ AV V+ Sbjct: 190 QLVLLEGAVAPVQARF 205 >UniRef50_Q2GL58 50S ribosomal protein L4 n=15 Tax=Rickettsiales RepID=RL4_ANAPZ Length = 208 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 5/206 (2%) Query: 1 MELVLK----DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME+ + + ++ ++ FG + ++ +VV A R GT K ++++G+ Sbjct: 1 MEVNIVNIANEVVGSIDLNPQVFGLEPRRDVLKEVVNWQLAKRRAGTHKAKGISDISGTT 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KP+RQK TGRAR GS++SP +R G V F P+ H +NKK+ R LK LS V + Sbjct: 61 AKPYRQKHTGRARQGSLRSPQFRGGAVIFGPVPRSHEYSLNKKVRRLGLKVALSMKVAAN 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 +L+V++ V+ KT + L+++ E + A RNL VD+ GI Sbjct: 121 KLVVLDSLDVDLKKTADAKGVFGNFAGHSSYLVVSESCKEEVVRACRNLRGVDLLKCVGI 180 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + + ++ D V++T D VK +E L+ Sbjct: 181 NVLDILKHDCVILTVDTVKSLEGRLS 206 >UniRef50_B4U745 50S ribosomal protein L4 n=4 Tax=Aquificaceae RepID=RL4_HYDS0 Length = 200 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 4/195 (2%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + + + + F + + ++ VV A RQGT + KTRAEV S KK QKGTG A Sbjct: 3 VNGVELRDDVFNVEPKKHILWDVVRWQLAKRRQGTHSTKTRAEVNCSKKKIMPQKGTGNA 62 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SV 126 R G+ + I+ GGV P+D+ K++KK + AL LS + + + V+E S+ Sbjct: 63 RHGARSANIFVGGGVVHGPTPRDYEYKLSKKYRKIALAMALSTKAKNNSVYVLESLLSSL 122 Query: 127 EAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 PKTK+ + LK+ + + VL++T + ++ + + +N+ V G++ ++ D Sbjct: 123 GKPKTKVAFELLKEKGISDKKVLVVTKDQNDIVSKSFKNIPNTKVLPVVGLNVYDILWAD 182 Query: 185 KVVMTADAVKQVEEM 199 +++ A++++ E Sbjct: 183 ALLIEQGALEKIYER 197 >UniRef50_B0U0Y8 50S ribosomal protein L4 n=35 Tax=Gammaproteobacteria RepID=RL4_FRAP2 Length = 207 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 6/206 (2%) Query: 1 MELVLKDAQSA----LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L +K A + V+E F D+NE+L+HQVVVAY AGARQGT+AQKTR+EV+G G Sbjct: 1 MDLNIKSLAGAEAGVVGVAEGVFAADYNESLIHQVVVAYMAGARQGTKAQKTRSEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KPWRQKGTGRAR+G+I+SPI+R GGVTFAA+P+ + QKVN+KMY GA+KSILSELVR D Sbjct: 61 AKPWRQKGTGRARAGTIRSPIFRKGGVTFAAKPKSYKQKVNRKMYSGAVKSILSELVRSD 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITG--ELDENLFLAARNLHKVDVRDATG 174 R+ VVE +E PKTK + + ++DVL + G E +ENL+L++RNL V V D+ Sbjct: 121 RMTVVESLRLETPKTKEFKVIVDSLGVKDVLFVVGVEEFNENLYLSSRNLKNVAVCDSVE 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEML 200 I+PVSL+ F+ VV T A+K++EE L Sbjct: 181 INPVSLVCFENVVFTKQAIKEIEEKL 206 >UniRef50_Q39Y05 50S ribosomal protein L4 n=11 Tax=Desulfuromonadales RepID=RL4_GEOMG Length = 220 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 114/197 (57%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + K+ + +S+ F D E L+H+ V A R GT K RA V+G GKKP++QK Sbjct: 22 INKNKVGEMDLSDAVFNGDVREYLIHEAVKVQLANRRAGTVGVKNRAAVSGGGKKPFKQK 81 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTG+AR G I++P + GGV F + + ++ +NKK + A++S LS L ++++L V++ Sbjct: 82 GTGQARQGCIRAPHYVGGGVAFGPQAKTYALSMNKKARKAAVRSALSMLFKENKLSVLDC 141 Query: 124 FSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 S+ + TK LK + L+I E + NL L+ARN+ V V A ++ ++ F Sbjct: 142 LSLPSISTKGFVGVLKTFDVTKTLVIIDEANTNLELSARNVKDVKVLKAEHLNVFDIVKF 201 Query: 184 DKVVMTADAVKQVEEML 200 + +++T AV+++E L Sbjct: 202 NNIILTQSAVRKIEGAL 218 >UniRef50_D0LIC4 Ribosomal protein L4/L1e n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIC4_HALO1 Length = 215 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 4/199 (2%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + + + + F + +E L +VV A R GT + K R EV GS KP+RQKGT Sbjct: 11 GETVGDIDLDDAIFAEEVHEHLFWEVVKWQRARRRAGTHSTKRRGEVRGSNIKPYRQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR G K+P W GG F +P+ + + KK+ + AL+S LS ++ +L+V++ F Sbjct: 71 GRARQGDRKAPHWVGGGSVFGPKPRSYDYALPKKVRKKALRSALSLRAKEQKLVVLDAFP 130 Query: 126 VEAPKTKLLAQKLKDMAL----EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 VE KT+ + L + VLI+ + +L RNL G++ ++ Sbjct: 131 VEGGKTRNVVSALAALGAAHTDNRVLIVDAGDNLDLIRGTRNLRGSKWLAPEGLNVYDIL 190 Query: 182 AFDKVVMTADAVKQVEEML 200 +VMT+ VK VE L Sbjct: 191 DHSTLVMTSATVKAVERAL 209 >UniRef50_C1SPI5 Ribosomal protein L4 n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPI5_9BACT Length = 208 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 2/202 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS-GKKP 59 ++ V + + +S+ +L+H+VV+ A R GT + RA++ G G KP Sbjct: 6 VKNVKNETVGTIDLSDEIMSYPVKSSLMHEVVIMQLANRRAGTHSTLNRAKMKGGRGAKP 65 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 WRQKGTGRARSGS KSPIWR G F +P+D+S + KK + ALKS + + Sbjct: 66 WRQKGTGRARSGSRKSPIWRGGATCFGPQPRDYSYSMPKKKIKNALKSAIRAKTEAGAVH 125 Query: 120 VVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 +++ SVE KTK + LK+ A VLI+ ELD+ A RN+ VD+ D G++ Sbjct: 126 ILDALSVENGKTKEAVEILKNFAADRKVLIVFKELDDKAVCAFRNIPYVDLLDVNGLNVY 185 Query: 179 SLIAFDKVVMTADAVKQVEEML 200 +I +++ DAV++++E+L Sbjct: 186 DVINSRTILVCKDAVERIQEVL 207 >UniRef50_A5IM84 50S ribosomal protein L4 n=51 Tax=Bacteria RepID=RL4_THEP1 Length = 235 Score = 223 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 123/218 (56%), Gaps = 20/218 (9%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 V + L +S+ F D N ++ + V + R GT + KTR EV+G G+KPW QK Sbjct: 9 VKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRKPWPQK 68 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 TGRAR GSI+SPIWR GG+ +P+D S+K+NKKM + AL+S LS R+++L V++ Sbjct: 69 HTGRARHGSIRSPIWRHGGIAHGPKPRDWSKKLNKKMKKLALRSALSVKYRENKLFVLDD 128 Query: 124 FSVEAPKTKLLAQKLKDMAL--EDVLIITGELDE---NLFLAARNLHKVDVR-------- 170 +E PKTK L + L+++ L + LI+ DE N+ L+ +NL V V Sbjct: 129 LKLERPKTKFLKEILQNLQLSDKKTLIVLPWKDEGYMNVKLSGKNLPNVKVIIADNPNNS 188 Query: 171 -------DATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 G++ ++ +D +V+T D V ++EE+L Sbjct: 189 KNGEKAVRIDGLNVFDMLKYDYLVLTQDMVSKIEEVLG 226 >UniRef50_Q9V3D0 Mitochondrial ribosomal protein L4 n=14 Tax=Endopterygota RepID=Q9V3D0_DROME Length = 296 Score = 223 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 4/203 (1%) Query: 2 ELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWR 61 + V + + + F ++ + V + KTRAEV G G+KPW Sbjct: 73 DAVAERKVGLIELHPDVFAAQPRVDIIQENVEWQSKYRYVSMAHTKTRAEVRGGGRKPWP 132 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 QKG GRAR GS++SP+ + GGV R P H + L S LS + QD L + Sbjct: 133 QKGGGRARHGSLRSPMLKGGGVVHGPRSPTTHFYMLPFYKRVLGLTSTLSVKLAQDDLHI 192 Query: 121 VEKFSVEAPKTKLLAQKLKDMALE-DVLIITGE--LDENLFLAARNLHKVDVRDATGIDP 177 ++ + + L + + VLI+ + N+ A+ +L V++ G++ Sbjct: 193 IDNVDIPTGDAEFLKDLIAERNWGPSVLIVDEDHMFPANICQASDDLGYVNLMPTFGLNV 252 Query: 178 VSLIAFDKVVMTADAVKQVEEML 200 S++ D +V+T AVK +E+ L Sbjct: 253 YSMLKHDTLVLTVAAVKHLEQRL 275 >UniRef50_C7PU72 Ribosomal protein L4/L1e n=11 Tax=Bacteroidetes RepID=C7PU72_CHIPD Length = 212 Score = 223 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 113/207 (54%), Gaps = 9/207 (4%) Query: 1 MELVLKDAQS-----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS 55 M++ + + + + + E FG + N +++ V Y A RQGT KTRAEV G+ Sbjct: 1 MQVDILNKEGKKTGRTIELPEEIFGVEPNNHVIYLAVKQYLAAQRQGTHKVKTRAEVKGA 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQ 115 +K +QKGTG +R G+I++P+++ GG F +P + K+N+K+ A S LS ++ Sbjct: 61 SRKLHKQKGTGGSRKGNIRNPLYKGGGTIFGPKPHKYDIKLNRKVKDLAKISALSTKAKE 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMAL----EDVLIITGELDENLFLAARNLHKVDVRD 171 + +IVVE +++ PKTK A L ++ + L + E ++N++L+ RN+ VD Sbjct: 121 NSIIVVEDLTLDTPKTKAFAGILNNLKVNVSGRKTLFVLPEYNDNVYLSLRNIPTVDSVM 180 Query: 172 ATGIDPVSLIAFDKVVMTADAVKQVEE 198 + I+ ++ + +V T A K E Sbjct: 181 LSDINTYEIMNSNVLVFTESAAKIFTE 207 >UniRef50_Q2JFH5 50S ribosomal protein L4 n=91 Tax=Actinobacteridae RepID=RL4_FRASC Length = 245 Score = 221 bits (565), Expect = 8e-57, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 101/201 (50%), Gaps = 2/201 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + ++ + F N L+HQVVVA A ARQGT KTR EV G G+KP+ Sbjct: 18 VHAPNGGEGGSVELPGGVFDVPLNIPLIHQVVVAQLAAARQGTHDTKTRGEVRGGGRKPY 77 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTGRAR GS+++P + GG P+ + Q+ KKM AL+ LS+ R +R+ V Sbjct: 78 RQKGTGRARQGSLRAPQFTGGGTVHGPTPRRYDQRTPKKMKAAALRGALSDRARNNRVHV 137 Query: 121 VEKF-SVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 V S E P TK L+ + VL++ DE + + RN+ V + D ++ Sbjct: 138 VSSLVSGETPSTKSAVTALRTIADTRRVLVVASRSDELTWKSLRNVAAVHLLDPGQLNTY 197 Query: 179 SLIAFDKVVMTADAVKQVEEM 199 ++ D VV DA+ Sbjct: 198 DVLVSDDVVFIEDALAAFLAR 218 >UniRef50_A4FPM4 50S ribosomal protein L4 n=49 Tax=Actinobacteria (class) RepID=RL4_SACEN Length = 228 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 107/198 (54%), Gaps = 2/198 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + + + F N AL+HQVVVA A RQGT A KTR +V+G GKKP+ Sbjct: 7 VRTPDGKTDGTVELPAEIFDVQANIALMHQVVVAQLAAGRQGTHATKTRGQVSGGGKKPY 66 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTG AR GSI++P + GG +P+D+SQ+ KKM AL+ LS+ VR +L V Sbjct: 67 RQKGTGNARQGSIRAPQFTGGGTVHGPQPRDYSQRTPKKMKVAALRGALSDRVRAGQLHV 126 Query: 121 VEKFS-VEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 V E P TK ++ + VL++ + +E +L+ RNL V + D + ++ Sbjct: 127 VSHVVGGEQPSTKQARTAVRTWTEAKRVLVVLNKSEETSWLSLRNLQNVHLIDPSQLNTY 186 Query: 179 SLIAFDKVVMTADAVKQV 196 ++ D VV T A ++ Sbjct: 187 DVLVNDDVVFTKAAFERF 204 >UniRef50_A5USI8 LSU ribosomal protein L4P n=8 Tax=Chloroflexi RepID=A5USI8_ROSS1 Length = 223 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 1/191 (0%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 + + +S+ FG + N ++HQ + A AR GT R EV GS +K +RQKG Sbjct: 9 SGEEVGVIQISDYVFGIEPNVPVMHQAMERQRANARLGTHNTLGRGEVEGSTRKLYRQKG 68 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TGRAR GSI++P + GG+ P+ +++ + +KM R A++S LS R + +++ Sbjct: 69 TGRARQGSIRAPHRKGGGIAHGPHPRKYTKAMPRKMRRLAVRSALSARYRDGAITFLDRL 128 Query: 125 SVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 + E P+TK + L + L LI+ + DE + +A NL V A ++ + L+ Sbjct: 129 TFEKPRTKDMIAVLNALNLTGKTLIVLDQKDEYVRRSANNLPNVKTLLAHYLNVIDLLTH 188 Query: 184 DKVVMTADAVK 194 D +VM AV Sbjct: 189 DHIVMLQAAVD 199 >UniRef50_Q9BYD3 39S ribosomal protein L4, mitochondrial n=28 Tax=Coelomata RepID=RM04_HUMAN Length = 311 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 5/200 (2%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 ++ + F ++HQV + R KTRAEV G G+KPW QKGT Sbjct: 74 QERVGLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGT 133 Query: 66 GRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 GRAR GSI+SP+WR GGV R P + + K+ LK L+ + QD L +++ Sbjct: 134 GRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSL 193 Query: 125 SVEAPKTKLLAQKLKDMAL-EDVLIIT---GELDENLFLAARNLHKVDVRDATGIDPVSL 180 + + L + + VL++ E+ +++ A L ++ A G++ S+ Sbjct: 194 ELPTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVGLNVHSM 253 Query: 181 IAFDKVVMTADAVKQVEEML 200 + +V+T V +E+ L Sbjct: 254 LKHQTLVLTLPTVAFLEDKL 273 >UniRef50_Q00YX6 50S ribosomal protein L4 (ISS) n=2 Tax=Ostreococcus RepID=Q00YX6_OSTTA Length = 275 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 25/216 (11%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 T+ F + + H+VV A AR GT KTR EV+G+ +K QKG GRAR Sbjct: 54 GEATLPGRIFDQPLRVDVAHRVVRWQRAKARAGTHKTKTRGEVSGTTRKARPQKGQGRAR 113 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 G +++P R GGV P+ H+ + KK+ R LK LS + ++++V+ F+ P Sbjct: 114 VGMLRAPQMRGGGVAHGPVPRSHAYALPKKVRRMGLKVALSARAAEGKIVIVDSFAGMEP 173 Query: 130 KTKLLAQKLKDM----------ALEDVLIITG---------------ELDENLFLAARNL 164 KT+++ + L+ + LI+ G +E + +++RNL Sbjct: 174 KTRVMKETLERLTGDMGLAAGGKFHSTLIVDGEFEETSEEDDDEETYSPNEIVRISSRNL 233 Query: 165 HKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 V+V G + S++ +VMT ++Q+ L Sbjct: 234 PHVEVLPQIGANVYSILRRRTLVMTKSGLEQLIRRL 269 >UniRef50_A5FZW4 50S ribosomal protein L4 n=180 Tax=Alphaproteobacteria RepID=RL4_ACICJ Length = 216 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 1/200 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + + + + E F ++ +VV A R GT K EV+G+ KKP+ Sbjct: 5 ISTLDAGSAGKAELPEEYFAATPRADIMARVVHWQLAKRRAGTHKVKGMGEVSGTTKKPY 64 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTG AR GS+++P +R+GG +DH +NKK+ R L S LS+ + + +L+V Sbjct: 65 RQKGTGNARQGSLRAPQFRTGGAVHGPVVRDHGYSLNKKVRRLGLISALSQKLAEGKLVV 124 Query: 121 VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 ++ + KT L KLK + L++ +DE A+RNL +DV G + + Sbjct: 125 LDTVA-GVSKTSELNVKLKKLGWGRTLVVDAVVDEGFARASRNLIGIDVLPVVGANVYDI 183 Query: 181 IAFDKVVMTADAVKQVEEML 200 + D + +TA ++ ++ L Sbjct: 184 LQHDTLAITAAGLEGLKRRL 203 >UniRef50_C1A6Q6 50S ribosomal protein L4 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6Q6_GEMAT Length = 213 Score = 219 bits (559), Expect = 4e-56, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 109/188 (57%), Gaps = 2/188 (1%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 + E TF N ++HQ V A+ A RQGT KTR EVTG +KPW+QKGTGRAR Sbjct: 21 GTRQLPEGTFDGIVNVPVMHQAVKAFLANRRQGTAKTKTRGEVTGGNQKPWKQKGTGRAR 80 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 GS ++P W GG F +P+ ++Q V K++ A KS L+ R++ ++VVE + AP Sbjct: 81 QGSTRAPNWPGGGTVFGPQPRSYTQIVPKQVRVLARKSALNARARENAVVVVEALNFSAP 140 Query: 130 KTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 KTK + + + + + VL++T + N++L+ARNL + V + + ++ D VV Sbjct: 141 KTKAMTELFTKLGVLGKKVLVLTDGVKPNVYLSARNLGQAHVMPYSDANTYHILWSDVVV 200 Query: 188 MTADAVKQ 195 + + A+ Q Sbjct: 201 IESSALTQ 208 >UniRef50_Q2S3R3 50S ribosomal protein L4 n=2 Tax=Rhodothermaceae RepID=RL4_SALRD Length = 215 Score = 218 bits (557), Expect = 7e-56, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 115/208 (55%), Gaps = 7/208 (3%) Query: 1 MELVLKDAQS-----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS 55 M++ + + T F + N+ ++ V A RQGT K R EV GS Sbjct: 1 MDVEIYQEDGVESGETAALDPTVFDIEPNDHIIWLDVKRIQAHQRQGTSKTKERGEVRGS 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQ 115 G+K +RQKGTG AR G +SPI R GG ARP+D++ +N+K R A +S LS Sbjct: 61 GRKLYRQKGTGNARVGDAQSPIRRGGGRAHGARPRDYAHDLNQKEKRLARRSALSYKAAN 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDAT 173 D + V+E FS++ P T+ L + + +E D+L+ T E++ ++L+++NL V+V++ Sbjct: 121 DNIQVIENFSLDRPDTRGLTDLFELLGVEGQDILLATAEVEREVYLSSQNLPDVNVQEVQ 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEMLA 201 I+ V ++ D V++ A+ + ++L+ Sbjct: 181 SINTVDILDADVVLLQEGALDWLTDVLS 208 >UniRef50_P61061 50S ribosomal protein L4 n=1 Tax=Bdellovibrio bacteriovorus RepID=RL4_BDEBA Length = 209 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 1/195 (0%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 K+ ++ ++ F + ++H VV A RQGT KT+ V+G GKKP++QKG Sbjct: 10 KKEKVGSVELAADVFETPVKKEVLHTVVQWQLAARRQGTHMTKTKGLVSGGGKKPFKQKG 69 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TG AR GS +S + GG F +P+ ++ + KK+ R L LS L ++ +L +V+ Sbjct: 70 TGGARQGSSRSILMPGGGTAFGPQPRSYAFVLPKKVRRLGLSMALSHLQKEGKLFIVDSM 129 Query: 125 SVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 + KT L ++L+ L+ +++ +D+ A++NL G++ L+ +D Sbjct: 130 A-SEGKTAELNKRLQAFGLKKAVLVDSVVDDKFNRASKNLPTFKYFPVEGLNVFDLLKYD 188 Query: 185 KVVMTADAVKQVEEM 199 V+T D+V ++ + Sbjct: 189 AAVITKDSVAKIVDR 203 >UniRef50_C6XLG6 Ribosomal protein L4/L1e n=7 Tax=Alphaproteobacteria RepID=C6XLG6_HIRBI Length = 309 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQ--SALTVSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGK 57 ++++ DA+ ++ +++ FG + ++ ++V A + GT +TR+EV + Sbjct: 3 LDVINLDAKKAGSVELNDAVFGIEDVRPDILQRMVRYQLAKRQAGTHKTQTRSEVNKTKT 62 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 + RQKG G AR GS +PI+ GGV + + H+ + KK ALK LS V+ Sbjct: 63 RFGRQKGGGGARHGSRNAPIFVGGGVAHGPKVRSHAHDLTKKFRALALKHALSAKVKDSS 122 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGE-LDENLFLAARNLHKVDVRDATGID 176 LIV+E+ +V KTK L + + + L++ L+I GE LD+N AARN+ +DV G++ Sbjct: 123 LIVLEEAAVSEVKTKALRAQFEALGLKNALVIGGESLDDNFAKAARNIPNIDVLPFAGLN 182 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 ++ +V+T +AV V Sbjct: 183 VYDVMRRHTLVLTKEAVDAVHARF 206 >UniRef50_B2KEM0 Ribosomal protein L4/L1e n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEM0_ELUMP Length = 211 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 1 MELVLKDAQSALT----VSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME + + Q + E F N +H+VV A+ A R+GT KTRAEV+G+G Sbjct: 1 METKVFNIQGKEEGTTALPEVLFSAKPNPTFLHEVVTAFLANQRRGTADVKTRAEVSGTG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPW+QKGTGRAR GS++SPIWR GGV F P+ Q + + R AL LS + Sbjct: 61 KKPWKQKGTGRARHGSMRSPIWRHGGVAFGPTPRSFRQYLPAQKRRAALIQALSAKYAEG 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDEN-LFLAARNLHKVDVRDATG 174 +IV ++ KTK+LA LK M L++T E +N +FL+ARN+ + + A+ Sbjct: 121 NVIVFNDGGIKESKTKVLATALKAMEAGRKPLVLTTEKTDNKVFLSARNIAGLSLIPASD 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEMLA 201 ++ ++ K+++T DA++ ++ A Sbjct: 181 VNAYVVLNSSKIIITKDALETLKSTFA 207 >UniRef50_B3QY25 50S ribosomal protein L4 n=15 Tax=Bacteroidetes/Chlorobi group RepID=RL4_CHLT3 Length = 210 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 7/208 (3%) Query: 1 MELVLKDAQS-----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS 55 ME+ + + + + F + N+ ++ V + A QGT KTR+EV+G Sbjct: 1 MEVKVLNKDGAETGETVELKPVIFEIEPNDHAIYLDVRSIMANQHQGTHKVKTRSEVSGG 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQ 115 G+KP+RQKGTG AR GS +SP+ GG F +P D+ +NKKM R A S LS + Sbjct: 61 GRKPYRQKGTGNARRGSSRSPVMIGGGAIFGPKPHDYVVGINKKMKRLARISALSYKAKN 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDAT 173 + +IV+E + KTK + LK + L + L++ ++ ++ + RN+ K+ + +A Sbjct: 121 NEIIVMEDYVPSEIKTKEVVSFLKSLGLNEKKTLLLMPSKNDVMYKSGRNISKLSILEAN 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEMLA 201 L+ +++ A++ +E L Sbjct: 181 KASTYDLLNNKTLLIQKSALETLERSLG 208 >UniRef50_Q2JV82 50S ribosomal protein L4 n=17 Tax=Cyanobacteria RepID=RL4_SYNJA Length = 326 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 7/201 (3%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + + +S + +++ + ARQG KTRAEV G G+KPWRQKGT Sbjct: 11 GETVGSAELSLKVARPETASHILYLALRRQMTNARQGNAHTKTRAEVRGGGRKPWRQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF- 124 GRAR+GSI+SP+WR GGV F R ++++ +N+K + AL++ L V + LIVVE F Sbjct: 71 GRARAGSIRSPLWRKGGVIFGPRKREYNLAMNRKERQLALRTALQSRV--EDLIVVEDFQ 128 Query: 125 -SVEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 + PKT+ +AQ L + + L+I E E + A RN+ +V + ++ L Sbjct: 129 DQLNPPKTRAVAQALLRWGVMEDQSALLIVAERSEAVERAVRNIARVKLIGLDQLNVFDL 188 Query: 181 IAFDKVVMTADAVKQVEEMLA 201 + D V++T A+++++ Sbjct: 189 LNVDWVLITTSALEKLKARWG 209 >UniRef50_UPI000186E58D mitochondrial 50S ribosomal protein L4, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E58D Length = 286 Score = 215 bits (548), Expect = 8e-55, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ + + + + ++ + FG L++ + + +R + KTRAE+ GSG+KP Sbjct: 71 VDSIKEQKRGLVQLNPSIFGTIPRLDLIYYNIKWQSLYSRVILYSAKTRAEMKGSGRKPH 130 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKGTGRAR GS ++P + GG R P + ++ L S LS + Q+ L Sbjct: 131 PQKGTGRARLGSRRAPQVKGGGTCHGPRNPTSYYFRIPLYKKIHGLTSTLSAKLAQNDLH 190 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELD---ENLFLAARNLHKVDVRDATGID 176 VV+ ++ ++ + +K+ ++I D N+ +A ++ + + G++ Sbjct: 191 VVDNINIPTDDSQYMIDLMKERNWGSSVLIVDSDDIMPRNISIATDSIGYITLMPVYGLN 250 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 ++ D +V+T A+ ++E L Sbjct: 251 VYGMLKHDTLVLTLSALDELENKL 274 >UniRef50_Q4JT48 50S ribosomal protein L4 n=7 Tax=Actinomycetales RepID=RL4_CORJK Length = 217 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 106/198 (53%), Gaps = 2/198 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + + + + F + + AL+HQVV A A RQGT A KTR V+G G+KP+ Sbjct: 8 VHTADGKTNGTVELPASIFDAEASVALMHQVVTAQLAAKRQGTHATKTRGMVSGGGRKPF 67 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTGRAR GSI++P + GG +P+D+SQ+ KKM AL+ L++ VR DR+ V Sbjct: 68 RQKGTGRARQGSIRAPHFTGGGTVHGPQPRDYSQRTPKKMKAAALRGALTDRVRHDRIHV 127 Query: 121 VEKFSV-EAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 VE+ + P TK ++ + + VL++ D + + NL +V ++ Sbjct: 128 VEELVPGQTPSTKAARAFIERLTDRKSVLVVLTREDVTAWKSVNNLPQVHTLVNDQLNTY 187 Query: 179 SLIAFDKVVMTADAVKQV 196 ++ D VV + +A+ Sbjct: 188 DVLNADDVVFSVEALNAF 205 >UniRef50_C8W7Z8 Ribosomal protein L4/L1e n=7 Tax=Coriobacteriaceae RepID=C8W7Z8_ATOPD Length = 208 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 78/203 (38%), Positives = 117/203 (57%), Gaps = 2/203 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ V +S +G + N +VHQVVV A ARQGT + K R EV+G G KP+ Sbjct: 6 IKNVEGKKVGTTELSSDVYGIEPNIPVVHQVVVCQDASARQGTHSTKNRHEVSGGGVKPY 65 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTGRAR GSI++ W GGV F P+ H++++N KM + A++S+LS V L++ Sbjct: 66 RQKGTGRARQGSIRAGQWTGGGVIFGPTPRSHARRINNKMVKLAMRSVLSGKVADSELVL 125 Query: 121 VEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 V+ P TK L+++ + + V +I + D N +L+ RNL KV + + + Sbjct: 126 VDSLEFAQPSTKQAKAALQNLGIEGKRVTVIVPDDDVNTYLSFRNLPKVSIFGVSEVTTR 185 Query: 179 SLIAFDKVVMTADAVKQVEEMLA 201 LI +VM+AD KQ+ E+LA Sbjct: 186 FLIDNGALVMSADVAKQLGEVLA 208 >UniRef50_B9XFN0 Ribosomal protein L4/L1e n=1 Tax=bacterium Ellin514 RepID=B9XFN0_9BACT Length = 208 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 117/206 (56%), Gaps = 5/206 (2%) Query: 1 MELVLKDAQSALTVSETT-FGRDFN---EALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L ++D + F N VH VVAY A R GT KT EV GS Sbjct: 1 MKLKIQDIKGNSQGEMDVKFSLVTNGRGTQAVHDAVVAYRAAQRSGTACAKTVGEVAGSN 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPW+QKGTGRAR+GS++SP+WR GGV F RP+D S+K+++ + A + L+E + Sbjct: 61 KKPWKQKGTGRARAGSVRSPLWRGGGVVFGPRPRDFSKKISRSTKQLAFRKALTERLNAG 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDV-LIITGELDENLFLAARNLHKVDVRDATGI 175 ++VV+ F + + KTK L + +E L++ LD NL A+RN+ KV+V + + Sbjct: 121 DVLVVDNFKLASAKTKEFVGVLTALKVEGTALVVADALDANLSRASRNVAKVEVATSDSV 180 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 + ++ DK+V T A ++VEE L Sbjct: 181 NTYQILRSDKLVFTRSAFEKVEERLG 206 >UniRef50_B0CPN7 Predicted protein n=2 Tax=Agaricales RepID=B0CPN7_LACBS Length = 253 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 2/193 (1%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 S + + T F ++H V Y RQG+ KTR EV GSG K RQKGTGRAR Sbjct: 40 SLVVLDPTVFNHPIRRDVLHLCVTHYLDSLRQGSANTKTRGEVRGSGAKLHRQKGTGRAR 99 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 G +SPI GGV F +P+D S K+ +K+ ++ LS +++ ++ ++ Sbjct: 100 VGDGQSPIRVGGGVAFGPKPRDFSTKLPRKVIEMGMRVALSVKMKERQVGIMASLDWPNA 159 Query: 130 KTKLLAQKLKDMALEDVLIITGE--LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 KT+ L QK+ + L L +TGE + L A N+ V V A ++ ++ + ++V Sbjct: 160 KTRNLVQKIDLLGLRKTLFVTGEGVVPAGLKQAMANIPLVQVITADEVNVYEIMKWQRLV 219 Query: 188 MTADAVKQVEEML 200 + AV+ E L Sbjct: 220 LDVKAVEFFERTL 232 >UniRef50_B3EUM2 50S ribosomal protein L4 n=71 Tax=cellular organisms RepID=RL4_AMOA5 Length = 210 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 117/202 (57%), Gaps = 2/202 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ KD + +S+T FG N+ ++ V A RQGT K R E+ GS KK Sbjct: 6 LQYTGKDTGRKVVLSDTIFGITPNDHAIYLDVKNILANKRQGTHKSKERGEIAGSTKKIK 65 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 +QKGTG AR+GSIKSPI+R GG F +P+D+ K+NKK+ + A KS L+ +Q + V Sbjct: 66 KQKGTGTARAGSIKSPIFRGGGRVFGPKPRDYGFKLNKKLKKLARKSALTYKAQQGNISV 125 Query: 121 VEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 +E FS E PKTK+ + L+++ + + L+I +D+NL LA+RNL V I+ Sbjct: 126 LEDFSFEMPKTKMYLEMLQNLNMADQKTLLILPAVDKNLVLASRNLPNTSVALVEQINTY 185 Query: 179 SLIAFDKVVMTADAVKQVEEML 200 L+ K++++ A+ ++ E Sbjct: 186 DLLYSKKILISETALSKLTENF 207 >UniRef50_A5CCL1 50S ribosomal protein L4 n=18 Tax=cellular organisms RepID=RL4_ORITB Length = 210 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 4/202 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 +L++ + + ++ + F + ++ V+ A GT KT + V+G+ KKP++QK Sbjct: 8 LLQEIEKEVELNPSVFCLKYRPDIIKLVIDWQLAKRMSGTHCTKTISGVSGTTKKPFKQK 67 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTG AR GS++S R GG++ + H V KK+ + ALK LS + ++LIVV+ Sbjct: 68 GTGNARQGSLRSVQMRGGGISHGPVVRSHEFDVPKKIRKQALKYALSYKLSVNKLIVVDD 127 Query: 124 FSVEAPKTKLLAQKLKDMALED----VLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 F++ + KT +L LK + I +D N FLA+RNL ++V G +P Sbjct: 128 FNIGSNKTAVLKNLLKKYNYSNYSGFFCIDDQNVDRNFFLASRNLFNLNVVAQIGANPYD 187 Query: 180 LIAFDKVVMTADAVKQVEEMLA 201 ++ D V++T A K +E LA Sbjct: 188 IMKHDCVMVTLSAAKSLEMRLA 209 >UniRef50_Q12GX0 50S ribosomal protein L4 n=18 Tax=Proteobacteria RepID=RL4_POLSJ Length = 206 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 104/206 (50%), Positives = 144/206 (69%), Gaps = 5/206 (2%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M++ L + Q + V +T FGR++NE+L+HQVVVA+ A ARQGTRAQK R +V S Sbjct: 1 MQVELLNDQGLASSKVDVPDTVFGREYNESLIHQVVVAFQANARQGTRAQKDREQVRHST 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQ 115 KKP++QKGTGRAR+G SP+WR GG F P ++ +QK+NKKMYR + SI S+L R+ Sbjct: 61 KKPFKQKGTGRARAGMTSSPLWRGGGRIFPNMPDENFTQKINKKMYRAGMASIFSQLARE 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 RL VV+ +V++PKTK+LA K K M L VL+I +DENL+LA+RNL + V + Sbjct: 121 GRLAVVDSLAVDSPKTKVLADKFKAMNLNSVLVIADVVDENLYLASRNLVNILVVEPRYA 180 Query: 176 DPVSLIAFDKVVMTADAVKQVEEMLA 201 DPVSL+ + KV++T A+ Q++EM A Sbjct: 181 DPVSLVHYKKVLVTKAAMDQLKEMFA 206 >UniRef50_Q1D774 50S ribosomal protein L4 n=3 Tax=Myxococcales RepID=RL4_MYXXD Length = 207 Score = 213 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 1/197 (0%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 S + +S+ FG + N L ++V R+GT K + V+G GKKPW+QKGT Sbjct: 11 LKKVSEIELSDDVFGTEPNAHLFYEVAKMQQINRRRGTVGVKNTSLVSGGGKKPWKQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR GSI++ W GG A + +D+ + +K+ RGALKS LS ++ LI+++ FS Sbjct: 71 GRARQGSIRASHWVGGGKAMAPKARDYFYRPPRKVRRGALKSALSLRAQEKTLIILDGFS 130 Query: 126 VEAPKTKLLAQKL-KDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 ++APK+K + L K + L++ L+I + + NL + RNL K DV G++ +++ Sbjct: 131 LDAPKSKQAFEVLTKRLKLQNALVIDDKGNTNLHRSVRNLAKFDVLPPEGLNLEAVLRHS 190 Query: 185 KVVMTADAVKQVEEMLA 201 +V+T+ A K +E L+ Sbjct: 191 HLVLTSAAAKTLEGALS 207 >UniRef50_UPI00017927E1 PREDICTED: similar to GA19152-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI00017927E1 Length = 308 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ + ++ + + + FG ++H+ VV K AEV S KKPW Sbjct: 83 LDTIKENPSTIIDLHPQVFGSRPRIDIIHENVVWQKKYKYVSYANTKVTAEVNMSSKKPW 142 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKG GRAR G+ +SP++R G V R H + L S LS + QD L Sbjct: 143 PQKGQGRARHGTRRSPLFRGGSVIHGPRSHTTHFYMLPFYKRVYGLTSTLSVKLIQDDLH 202 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALE-DVLII--TGELDENLFLAARNLHKVDVRDATGID 176 VV + + + VL I T + +N+ LA + +++ G++ Sbjct: 203 VVNNLDIPTDDPGYINDLVDSRLWGPSVLFIDDTDTMPKNISLALNQIKHMNLMPVYGLN 262 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 S++ ++ +V+T AVK+++E L Sbjct: 263 VYSMLKYETLVLTVAAVKKIQERL 286 >UniRef50_Q83FY7 50S ribosomal protein L4 n=7 Tax=Micrococcineae RepID=RL4_TROWT Length = 248 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 2/192 (1%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 +A L + F D N L+HQVVVA A RQGT K+RAEV+GSG+KP+RQKGT Sbjct: 12 GNAVGTLQLVGHLFDSDPNLHLIHQVVVAQQAAFRQGTHKTKSRAEVSGSGRKPFRQKGT 71 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 G AR GS ++P R GGV P+++ + KKM + AL L+ R R+ +V+ F Sbjct: 72 GNARCGSTRAPQMRGGGVVHGPVPRNYVHRTPKKMIKAALAGCLTNRARAGRVHIVDSFG 131 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENL-FLAARNLHKVDVRDATGIDPVSLIAFD 184 + P + L L++ + +++ + + RN+ V + ++ ++ D Sbjct: 132 -DTPSVADALTLFQITGLSSKLLVVAQASDSVAYRSVRNIPGVRLVHVGQLNSYDVLRSD 190 Query: 185 KVVMTADAVKQV 196 V+ T A Sbjct: 191 DVLFTRGAYNVF 202 >UniRef50_A9BCP6 50S ribosomal protein L4 n=25 Tax=cellular organisms RepID=RL4_PROM4 Length = 211 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 7/201 (3%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 T+ L+H+ VV A +RQGT + TR+EV G G+KP++QKGT Sbjct: 11 GQEAGKATLDLKVAKETTAVDLIHRAVVRQQAHSRQGTASTLTRSEVRGGGRKPYKQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF- 124 GRAR GSI++P+ GG+ F +P+ S +N+K R AL++ L + R + L++V+ F Sbjct: 71 GRARQGSIRTPLRPGGGIIFGPKPRSFSLGMNRKERRLALRTAL--MARINDLMIVQDFG 128 Query: 125 -SVEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 +++ PKT+ + + L + VLII + E + + RN+ +V V A ++ L Sbjct: 129 TALKVPKTREIVEALSRFGIADDAKVLIILAQPSEIIIRSVRNIERVKVIGADQLNVFDL 188 Query: 181 IAFDKVVMTADAVKQVEEMLA 201 + + +V+ A+ ++E+ Sbjct: 189 LNANSLVIGEKALSTIKEVYG 209 >UniRef50_C6XHJ0 50S ribosomal protein L4 n=2 Tax=Rhizobiaceae RepID=C6XHJ0_LIBAP Length = 207 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 1/196 (0%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + + ++VSE F + ++ +V+ + R G K R+EV +G K + QKGT Sbjct: 11 GEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYTGSKMYVQKGT 70 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR S +R GG F P + KK+ AL+ LS+ + ++V++ Sbjct: 71 GRARHSSKSVSQFRGGGKAFGPVPIIGVHALPKKVRSLALRHALSDKFCSNDIMVIDNLV 130 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 + KTK L + + + L + LII G +LD N LAARN+ +++ GI+ ++ Sbjct: 131 SKECKTKYLVTRFRALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQGINVYDILRCS 190 Query: 185 KVVMTADAVKQVEEML 200 K+V++ A++ +E+ Sbjct: 191 KLVLSKSAIEALEDRF 206 >UniRef50_A3EVS0 Ribosomal protein L4 n=2 Tax=Leptospirillum sp. Group II RepID=A3EVS0_9BACT Length = 218 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 5/205 (2%) Query: 1 MELVLKDAQSALTVSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKP 59 M + D+ +L ++ + + N L+H+++ AG R GT + KTR EV+G GKKP Sbjct: 5 MVALKDDSLKSLEINVSAEEAELINIPLLHEIIKMQRAGIRSGTASTKTRGEVSGGGKKP 64 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 +RQKGTGRAR GS ++P WR G + F RP+D+ + K A+K+ + + L Sbjct: 65 YRQKGTGRARQGSTRAPQWRGGAIIFGPRPRDYFYRQPAKKVVLAVKNAIFSHLENKSLY 124 Query: 120 VVEKFSVEAPKTKLLAQKLKDM----ALEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 VV+ V + KTK L E +LII L EN++ + RN+ +++ + Sbjct: 125 VVDSLDVPSRKTKDLIALFNKWSLFPGEERILIIDNGLSENIYYSCRNIPGLEILLPHQV 184 Query: 176 DPVSLIAFDKVVMTADAVKQVEEML 200 +P L+ DKV+++ +A + + +L Sbjct: 185 NPYDLLIADKVLVSKEAFENMNVLL 209 >UniRef50_C1F641 50S ribosomal protein L4 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=RL4_ACIC5 Length = 222 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 4/199 (2%) Query: 6 KDAQSALTVSETTFG-RDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 +L +++ F + NEAL+ + V Y A RQGT A K + V+GSGKK W+QKG Sbjct: 11 GKKVGSLELADELFAPSEVNEALLWEAVKHYRASLRQGTHATKNKKLVSGSGKKLWKQKG 70 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TGRAR GS++SP+WR GG +P+ + KK GAL+S L+ + +LIVVE F Sbjct: 71 TGRARVGSVRSPLWRHGGTVHGPQPRSYDYAFPKKKLMGALRSALAAKLADGKLIVVESF 130 Query: 125 SVEAPKTKLLAQKLKDMAL-EDVLIITGELD--ENLFLAARNLHKVDVRDATGIDPVSLI 181 V PKTKL L + L++ ENL+L ARNL V++ + P L+ Sbjct: 131 EVSEPKTKLYRTALDKLEANRSTLLVESSQSLTENLYLGARNLANVELVLNNEVHPYDLL 190 Query: 182 AFDKVVMTADAVKQVEEML 200 +++ + + A+++++E L Sbjct: 191 RYERAIFSRAAIEKLQESL 209 >UniRef50_D1NBS4 Ribosomal protein L4/L1e n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBS4_9BACT Length = 209 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 75/195 (38%), Positives = 109/195 (55%), Gaps = 2/195 (1%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + E + E VH VVAY AG R GT KTR EV+G G KP+RQKG GRA Sbjct: 15 VGEYVIPEGVIELEKGEQAVHDTVVAYLAGQRAGTACTKTRGEVSGGGAKPFRQKGMGRA 74 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R+GS +SP+W GG F RP+ ++KVNKK+ + ALK LSE + + L++++KF + Sbjct: 75 RAGSSRSPVWVGGGTIFGPRPRSFAKKVNKKVLQLALKRALSERIVEGDLVLLDKFELAD 134 Query: 129 PKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 KT+ LK++ + + V+I ELD A N+ V +R ++ L+ F K+ Sbjct: 135 HKTRNAFAILKNLNVANETVMISLPELDAASVCATGNIPNVVLRKTDTVNVYELLRFKKL 194 Query: 187 VMTADAVKQVEEMLA 201 + T DA+ + LA Sbjct: 195 LFTKDALDAFIQRLA 209 >UniRef50_C0QVZ7 50S ribosomal protein L4 n=3 Tax=Brachyspira RepID=RL4_BRAHW Length = 215 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 13/212 (6%) Query: 1 MELVLK----DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME+V+ D+ L + + F + N L+++ + A RQGT + KTRAEV+G G Sbjct: 1 MEVVILNENGDSVGNLEIVDEIFKSEVNNNLLYEAIKNELANRRQGTHSTKTRAEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPWRQKGTGRAR+GS +SPIW GG T +P+D+S ++ KKM R AL S+LS + Sbjct: 61 KKPWRQKGTGRARAGSTRSPIWVGGGKTHTPKPRDYSYRLPKKMKRKALLSVLSLKYGSN 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDM---ALEDVLIITGE-----LDEN-LFLAARNLHKV 167 L V E F+ +APKTK +A + + V + G+ + N L L+ RN+ + Sbjct: 121 VLKVFEDFTFDAPKTKRMASFISKVKEPNTRKVAFVVGKDESLGDNYNKLLLSLRNIKDL 180 Query: 168 DVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 + +A + L D+V T A+ ++ Sbjct: 181 KLVNADSMSIHPLFYADEVYFTKTALSKLNAR 212 >UniRef50_D2VLH2 Ribosomal protein L4/L1e n=1 Tax=Naegleria gruberi RepID=D2VLH2_NAEGR Length = 332 Score = 209 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 13/212 (6%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 L + + + F + +++ +V A RQGT K R E +K Q Sbjct: 113 LKTGEFTEMINLHPYFFNCTPRKDILYLMVKWQLAKRRQGTHKTKYRLETAYCKQKQTPQ 172 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KG G AR +P +R GG A RP+ + +NKK+ R AL+ L+ +Q +LI+V+ Sbjct: 173 KGRGAARHSDRGAPQYRGGGHAMALRPRSYEYNLNKKIRRLALRMALTTKYQQGKLIIVD 232 Query: 123 KFSVEAPKTKLLAQKL------------KDMALEDVLIITGE-LDENLFLAARNLHKVDV 169 FS++ KTK +A + K++ VL+I GE ++ N NLH D Sbjct: 233 DFSIDTFKTKYVAGLISNTVFPDSETHEKEIKDRGVLLIDGEQVNANFERGVFNLHYADY 292 Query: 170 RDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 G++ ++ +KVV++ ++ + + A Sbjct: 293 LSIDGLNVYDMLRREKVVISKSGLETLTKKYA 324 >UniRef50_Q1IX73 50S ribosomal protein L4 n=10 Tax=Bacteria RepID=RL4_DEIGD Length = 213 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 10/201 (4%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + ++ ++ ++ + + N ++H+VV AG R+GT + KTRAEV+ SGKK + Sbjct: 4 INVIGQNGGRSIDLDLP----EVNPHVLHEVVTWQLAGRRRGTASTKTRAEVSRSGKKMY 59 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 QKGTG AR G P + GGV F +P+ +S + +K+ + L L++ +Q +L Sbjct: 60 SQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYSYTLPRKVRQLGLAMALADRQQQGKLTA 119 Query: 121 VEKFSVEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDP 177 V+ F ++ KTK K+ L E VLI+T DE AARN+ V G++ Sbjct: 120 VDGFGLD-GKTKSFVSWAKENGLDGSERVLIVTD--DELTRRAARNVAWATVLPVAGLNV 176 Query: 178 VSLIAFDKVVMTADAVKQVEE 198 ++ +++V+ A A++ +E Sbjct: 177 YDILRHERLVIDAVALEPAQE 197 >UniRef50_Q54RB5 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54RB5_DICDI Length = 258 Score = 208 bits (530), Expect = 9e-53, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 7/206 (3%) Query: 1 MELVLKD------AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTG 54 +E+ + + + +S+ F L+H++V A ++QGT + Sbjct: 49 IEVPVLNFNDKLSPIENIQLSKDVFSVPLRVDLLHRMVRYQRAKSQQGTHQALNMGRMER 108 Query: 55 SGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVR 114 + KKP RQKG+G AR G+ S +R G TFA + H+ + +K+ + LK LS + Sbjct: 109 TNKKPTRQKGSGNARKGTNHSVHFRGGARTFAPTMRSHAHDLPRKVRKLCLKVALSTKLA 168 Query: 115 QDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATG 174 Q++L+VV+ F++E+ KTK L KL L++ E+ + L ++ N+ K+D G Sbjct: 169 QNKLVVVDGFNLESHKTKELLSKLPK-DWGRTLLVDSEISDFLNKSSLNVQKIDTLPQLG 227 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEML 200 ++ +++ D +V+T +V+ ++ L Sbjct: 228 LNVYTILQNDTLVLTKSSVEALQARL 253 >UniRef50_C7MFF5 LSU ribosomal protein L4P n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MFF5_BRAFD Length = 312 Score = 208 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 107/195 (54%), Gaps = 2/195 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 ++ + + F N L+HQVVVA A ARQGT KTRAEV G GKKPW+QK Sbjct: 12 PAGKKSGSVELPASIFDVQTNVPLIHQVVVAQQAAARQGTHKAKTRAEVRGGGKKPWKQK 71 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRAR GS+++P + GG P+D+SQ+ KKM AL+ LS+ R R+ VV Sbjct: 72 GTGRARQGSLRAPQFTGGGTVHGPVPRDYSQRTPKKMKAAALRGALSDRARNGRVHVVSS 131 Query: 124 -FSVEAPKTKLLAQKLKDMALEDVLIITGELDENL-FLAARNLHKVDVRDATGIDPVSLI 181 + TK + Q L +++ L++ D++L L++RNL V A ++ ++ Sbjct: 132 LLEGDVASTKAVRQTLSNVSDRRHLLVVVRRDDDLGALSSRNLPTTHVLYADQVNTYDVM 191 Query: 182 AFDKVVMTADAVKQV 196 D VV TA A++ Sbjct: 192 LSDDVVFTAGALEDF 206 >UniRef50_P51313 50S ribosomal protein L4, chloroplastic n=3 Tax=Eukaryota RepID=RK4_PORPU Length = 214 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 121/200 (60%), Gaps = 8/200 (4%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 ++ +D LVH+ +V + RQG+ KTR+EV G G+KPWRQKGT Sbjct: 16 GQVSGNADLNLKI-SKDSGMYLVHRALVKQSNEKRQGSANTKTRSEVRGGGRKPWRQKGT 74 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR+GSI+SP+WR GGV F +P+ ++K+NKK + AL++ L+ +VVE F Sbjct: 75 GRARAGSIRSPLWRGGGVIFGPKPRSFAKKMNKKESQLALRTALNNK--SVNTLVVENFD 132 Query: 126 --VEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 + PKTKL + + L + +L+I + D N++L+ RNL+ V++ A ++ ++L Sbjct: 133 TYFQKPKTKLFIEAITRWNLDLNKKLLVIVDKKDLNVYLSIRNLYNVEIISADTLNIMAL 192 Query: 181 IAFDKVVMTADAVKQVEEML 200 +A KV++T DA+ +++E+ Sbjct: 193 LAAHKVIITVDALSKIQEVY 212 >UniRef50_Q0EW37 50S ribosomal protein L4 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW37_9PROT Length = 207 Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 104/196 (53%), Gaps = 1/196 (0%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTG 66 ++ FG D + A VH+V A A+ R GT K R+EV+G GKKPW+QKGTG Sbjct: 12 KEVGKRELNPAVFGLDADAAFVHRVYAALASAQRGGTSKVKDRSEVSGGGKKPWKQKGTG 71 Query: 67 RARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 RAR+GS + WR GG + ++NKK R AL LS+ +R+ +L VV+K Sbjct: 72 RARAGSSRQAQWRHGGTAHGPSADTSFATRINKKERRRALCLALSDCLREGKLTVVDKLE 131 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 + KTK L + + LI+ GE + + L+ RN+ + ++ L+ + Sbjct: 132 LAEIKTKAFVDTLGALGADSGLIVLGESNNAVELSGRNVPNTRIVLDGQVNLHDLLKSKR 191 Query: 186 VVMTADAVKQVEEMLA 201 VV+T+ A+ +EE LA Sbjct: 192 VVLTSAAIDNLEERLA 207 >UniRef50_UPI0001C30EB8 ribosomal protein L4/L1e n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30EB8 Length = 210 Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 102/191 (53%), Gaps = 1/191 (0%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 + + + F FN LVH+ V + RQGT + KTR V G G KPWRQKGTGRAR Sbjct: 10 GEVVLDDLAFTAKFNGPLVHETVRSELNALRQGTSSTKTRGNVRGGGAKPWRQKGTGRAR 69 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 +GS +SPIW+ GG F P+ ++ KVN+K R AL+S LS + L V + + +AP Sbjct: 70 AGSSRSPIWKGGGTVFGPSPRHYTFKVNRKARRAALRSALSVQADRGSLAVFDATTFDAP 129 Query: 130 KTKLLAQKLKDMALEDVLIITGELDE-NLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 TK ++ L D + ++ + DE N L+ RNL ++ V +I +++ Sbjct: 130 STKTASKLLADWGQPNPTLVLLDADEANAGLSFRNLERILVLPVEDAGVADVIGAASLLI 189 Query: 189 TADAVKQVEEM 199 + A+ Q+ Sbjct: 190 SETALAQITAR 200 >UniRef50_C9RR33 Ribosomal protein L4/L1e n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RR33_FIBSS Length = 206 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 3/195 (1%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 D ++ + + F ++ N+ ++ + A RQGT K++ EV+G G+KPW+QKG Sbjct: 10 TGDFKNDIQLP-ALFDQEVNKVCMYLHIKAILNNNRQGTAQTKSKGEVSGGGQKPWKQKG 68 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TGRARSG S +W G + D+ +KVNKK+ + A S L+ + ++ V E Sbjct: 69 TGRARSGQNTSAVWVRGAKAHGPKSHDYFEKVNKKVKKIAFYSALANKASEGKVSVFEAL 128 Query: 125 SVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 S APKTK L L + +VL I E D+NL+L++ N+ ++ ++ Sbjct: 129 SFSAPKTKDLLSVLAKSGIEQRNVLFIVSEKDQNLYLSSNNIPWCRCARVADVNTYDVVR 188 Query: 183 FDKVVMTADAVKQVE 197 + VV++ A+ ++E Sbjct: 189 ANNVVISQAALAELE 203 >UniRef50_Q605B3 50S ribosomal protein L4 n=3 Tax=Gammaproteobacteria RepID=RL4_METCA Length = 205 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 96/203 (47%), Positives = 143/203 (70%), Gaps = 2/203 (0%) Query: 1 MELVLKD--AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKK 58 + + + A L VS+ FG+ FNE+LVHQ+VV Y A AR GT+AQK+R++V+G GKK Sbjct: 3 LSIPKIENGAAGDLEVSDKVFGQGFNESLVHQLVVGYLAAARSGTKAQKSRSDVSGGGKK 62 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRL 118 PW+QKG+G AR+G+ +SP+WR+GGVTFAA +++ QK+NKKMYR A++SI SEL+RQ RL Sbjct: 63 PWKQKGSGHARAGTTRSPLWRTGGVTFAASNRNYRQKLNKKMYRAAVRSIFSELLRQGRL 122 Query: 119 IVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 +V + +PKT+ LA KLK +I+ +LD NL L++RNL V + A + PV Sbjct: 123 VVSDGIVPTSPKTRELAAKLKSFGEGYTVILAEQLDLNLALSSRNLPNVSINTADTLSPV 182 Query: 179 SLIAFDKVVMTADAVKQVEEMLA 201 L+ ++V+ T+ A++++E L+ Sbjct: 183 DLVHAERVIATSSAIRKLEVRLS 205 >UniRef50_O17005 Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=O17005_CAEEL Length = 299 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 7/206 (3%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ + + + + F ++H+ + + T+AE+ G G+KPW Sbjct: 56 LDTIEDEKLGLVDLHPDIFRTSPRIDILHRNLTWQSVYRNVQMTKMLTKAEMPGGGRKPW 115 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QK TGRA GSI+SP + GG R P+ + + L L+ QD L Sbjct: 116 PQKKTGRAHVGSIRSPQFIRGGFANGVRGPRTWFYMLPDAVRIQGLCVALTLKHTQDDLH 175 Query: 120 VVE---KFSVEAPKTKLLAQKLKDMALEDVLIIT--GELDENLFLAARNLHKVDVRDATG 174 +V+ PK + + ++ VL + E+ L A + L ++V G Sbjct: 176 IVDKIQNLQNGDPKYWIDLCEARNYGY-SVLFVDDCDEISGGLAEAQQALPWLNVMPVYG 234 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEML 200 ++ SL+ +D +V++ A+++VEE L Sbjct: 235 LNCFSLMKYDTIVLSRSALERVEERL 260 >UniRef50_Q1ISC1 50S ribosomal protein L4 n=2 Tax=Acidobacteria RepID=RL4_ACIBL Length = 217 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 112/198 (56%), Gaps = 2/198 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + + +++ FG NE L+ + V Y AG +GT A K + V+G+GKK W+QK Sbjct: 9 LSGEKVGSFELADEVFGA-VNEDLLWEAVKHYRAGQHRGTHATKNKKLVSGAGKKLWKQK 67 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTGRAR GSI+SP+WR GG +P+ + +K GAL+S L+ + +L VVE Sbjct: 68 GTGRARVGSIRSPLWRHGGTVHGPQPRSYDYAFPRKKLLGALRSALAAKLADGKLTVVES 127 Query: 124 FSVEAPKTKLLAQKLKDMALEDV-LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 F V+ PK + L + ++ L+I ++NL L++RNL V++ + P L+ Sbjct: 128 FDVKEPKANAFRKTLAGLKVDKTALLIESAENKNLELSSRNLKGVELVAGNAVHPYHLLR 187 Query: 183 FDKVVMTADAVKQVEEML 200 +D+ V+ A+++++ L Sbjct: 188 YDRAVIARPALEKLQNSL 205 >UniRef50_Q1H4N6 50S ribosomal protein L4 n=174 Tax=Proteobacteria RepID=RL4_METFK Length = 208 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 118/208 (56%), Positives = 148/208 (71%), Gaps = 7/208 (3%) Query: 1 MELVLKDAQSA-----LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS 55 ME+ L D L VSE TFGR+FNEALVHQVVVAY A AR TRAQ TRAEV+ + Sbjct: 1 MEIKLIDKNGRPAKAGLAVSEATFGREFNEALVHQVVVAYQANARTATRAQLTRAEVSHT 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVR 114 KKPW QKGTGRAR+G S IWR GG F P ++ S K+N+K YR ++SILSELVR Sbjct: 61 TKKPWNQKGTGRARAGMSSSTIWRGGGRAFPNTPDENFSHKINRKAYRAGVRSILSELVR 120 Query: 115 QDRLIVVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDAT 173 QDRL VE+F+V+ PKTK L +K+K + E +L++ + DENL+L+ARNL V V +A Sbjct: 121 QDRLSAVEEFAVDTPKTKQLVEKIKGLGYNEGLLVLVDKFDENLYLSARNLPHVLVLEAQ 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEMLA 201 +DPVSL+ F +V+ TA AVK++EEMLA Sbjct: 181 YVDPVSLVRFPQVLATAGAVKKLEEMLA 208 >UniRef50_B1GZ84 50S ribosomal protein L4 n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZ84_UNCTG Length = 206 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 117/204 (57%), Gaps = 6/204 (2%) Query: 1 MELVLKDAQSA----LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME + DA+ + + + FG+ + AL+H+V +AY R GT KTR EV+ SG Sbjct: 1 METTVYDAKGEEKGKIELPD-FFGKKVSVALLHEVTMAYLNNLRAGTHKTKTRGEVSFSG 59 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KPW+QKGTG AR+G SP+WR GG+ F +P+++ K++K+ + +L S ++ Sbjct: 60 AKPWKQKGTGNARAGQKNSPLWRKGGIIFGPQPRNYYTKISKRKKKLSLDMAFSAQLKNG 119 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRDATGI 175 +IVV+ V KTK +A+ +K++ + I+ D + +AARN+ V V + I Sbjct: 120 NIIVVDSVKVSEVKTKKVAELIKNLKVGGKKIVFAIPSDTDFKVAARNIKNVIVENIKNI 179 Query: 176 DPVSLIAFDKVVMTADAVKQVEEM 199 + ++ DK+V+T +AV ++E Sbjct: 180 NAYQVLWADKLVITPEAVDLIKER 203 >UniRef50_B7J468 50S ribosomal protein L4 n=4 Tax=cellular organisms RepID=RL4_ACIF2 Length = 205 Score = 202 bits (515), Expect = 6e-51, Method: Composition-based stats. Identities = 81/205 (39%), Positives = 129/205 (62%), Gaps = 4/205 (1%) Query: 1 MELVLKD----AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M++ + S + +++ FG +NEAL+HQVVVA AG R QK RA V G G Sbjct: 1 MQVQSLEVTTGKSSEIEIADGVFGVPYNEALLHQVVVAQMAGMRSANAVQKNRAAVRGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 +KPW+QKGTGRAR+GSI+SPIWR GG F ++++QKVNKKM+ GA++++L+EL+RQ Sbjct: 61 RKPWKQKGTGRARAGSIRSPIWRGGGRAFPGGNENYTQKVNKKMWAGAMRTVLAELLRQG 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGID 176 RL ++++ P+++L L ++VL++ GE+ NLFL RN +V + + Sbjct: 121 RLQIIQQEDFGEPRSRLGRDWLSRAGGDNVLLVMGEVPLNLFLGLRNFPRVGIAGWQDVG 180 Query: 177 PVSLIAFDKVVMTADAVKQVEEMLA 201 P L+ + +V++ +A ++ E+ Sbjct: 181 PADLLQYGRVLLDVEAAARLGEVYG 205 >UniRef50_UPI0000D54D0B 50S ribosomal protein L4 n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D54D0B Length = 207 Score = 202 bits (515), Expect = 6e-51, Method: Composition-based stats. Identities = 59/207 (28%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M++ ++D+ ++ + F + N ++V Q V++ + RQGT + + R+ V G G Sbjct: 1 MKINVQDSSGKIVESIKLDSNIFNIEVNSSVVRQAVLSELSNLRQGTHSSRNRSAVRGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKPW+QKG G AR+G+I+SP+W+ GG F P +++K+ KKM + A KS+L++ V+ Sbjct: 61 KKPWKQKGRGVARAGTIRSPLWKGGGAVFGPEPHVYNKKLPKKMSKLARKSVLTKKVQDK 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATG 174 L+V++ ++ + KT ++ + + + L++ ENL L++RN+ V + + Sbjct: 121 ELVVLDSINISSKKTADFISFMESINILNKKTLVLVDSYQENLILSSRNIRNVFIENVKT 180 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEMLA 201 + L+ + +++ + E+LA Sbjct: 181 VSVYDLLDSEIILIDKLGINTFSEVLA 207 >UniRef50_A6DPN5 50S ribosomal protein L4 n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPN5_9BACT Length = 215 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 117/205 (57%), Gaps = 10/205 (4%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 A L ++ + E VH+ VVA+ A R G+ KTR+E G G+KPWRQKG Sbjct: 10 KGQASGELEINSKWLEFEKGEQAVHESVVAFLASLRSGSANTKTRSEKRGGGRKPWRQKG 69 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TG AR+GS +SPIW GGV F +P+ +++ VNKK+ R A++ L+E ++ + LIVV+ F Sbjct: 70 TGNARAGSTRSPIWTGGGVAFGPKPRSYAKNVNKKVRRLAVRRALAERIQAEELIVVDSF 129 Query: 125 SVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLF------LAARNLHKVDVRDATGID 176 + E P TK L+ + V+I++ +L EN+ + N+ V A+ ++ Sbjct: 130 AFEKPSTKTAIAFLESVNAADRPVIILSDDLTENIENLENTAKSFNNVSLV--MTASEVN 187 Query: 177 PVSLIAFDKVVMTADAVKQVEEMLA 201 +++ KV++T A++QV + ++ Sbjct: 188 AYDILSGKKVIITKAALEQVGQRIS 212 >UniRef50_C1E7J4 Predicted protein n=2 Tax=Micromonas RepID=C1E7J4_9CHLO Length = 276 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 3/197 (1%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 + T+ D + LVH+ VV AR+GT + T++EV G G+KP++QKGTG Sbjct: 73 SAGTATLDVKVAKPDVAKGLVHKYVVMVRQNARRGTASTLTKSEVRGGGRKPFKQKGTGN 132 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR+GS ++P+ GGV F +P+D S K+NKK R A+ + + +IVV+ + Sbjct: 133 ARAGSSRTPLKPGGGVVFGPKPKDWSIKMNKKERRLAMATAIQSAAAASSMIVVDSLAGA 192 Query: 128 APKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 APKTK +A LK + E IIT + E + L+ RN+ +V D ++ ++ D Sbjct: 193 APKTKAMATALKSWGVAEGEKAYIITKDAPEGVTLSTRNMARVVQTDIKHLNVYDVLNAD 252 Query: 185 KVVMTADAVKQVEEMLA 201 KVV+ A++ + + Sbjct: 253 KVVVEESALQYINDFYG 269 >UniRef50_C6HWF6 Ribosomal protein L4 n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWF6_9BACT Length = 210 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 115/208 (55%), Gaps = 8/208 (3%) Query: 1 MELVLK----DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M + + + S +++ FN +VH++ AG R GT + KTR EV+G G Sbjct: 1 MNIPVLSSDGKSSSTISIDSEVTQDSFNNGIVHEITTMELAGMRAGTSSTKTRGEVSGGG 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KKP+RQKGTGRAR GS ++P WR G + F RP+++ K K AL+ L V ++ Sbjct: 61 KKPYRQKGTGRARQGSSRAPQWRGGAIIFGPRPRNYFYKQPSKKVLKALREALLVRVSEN 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDM----ALEDVLIITGELDENLFLAARNLHKVDVRDA 172 ++ ++ E KTK LK +++LII+ ELDEN +L++RN+ + + + Sbjct: 121 KVSIIPNLESETLKTKKFVDLLKKYHTNPGYQNILIISEELDENTWLSSRNIPGLTILPS 180 Query: 173 TGIDPVSLIAFDKVVMTADAVKQVEEML 200 T + + ++ D V++ D+ + ++++L Sbjct: 181 TAVTALYMVFTDVVLVAEDSREWLQQLL 208 >UniRef50_B0VI30 50S ribosomal protein L4 n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI30_9BACT Length = 211 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 4/199 (2%) Query: 6 KDAQSALTVSETTFGRDFNEA--LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + + E F D N L+++VV + A RQGT +K R+ GS +K +RQK Sbjct: 11 GELIGEVDLPEGIFEVDVNAPKILLNEVVTMFLANQRQGTVQKKNRSMTAGSTRKLFRQK 70 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 GTG AR G+ +SPI GG FA P+D +K+ + R ALK L++ R+ R+++V+ Sbjct: 71 GTGNARVGTRRSPIRVHGGKAFAIYPKDWYRKIPRTKKRLALKVALTDRAREGRIMIVDN 130 Query: 124 FSVEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 S E P TKL + L + E LI+T + NL +V A ++ ++ Sbjct: 131 LSFEKPNTKLAVELLNKIIPEKGYKLIVTDGHHIPTVKSFANLPEVMTDRADSLNAYEVL 190 Query: 182 AFDKVVMTADAVKQVEEML 200 ++MT +A+K+VEE+ Sbjct: 191 KSSYIIMTDEALKKVEEVF 209 >UniRef50_Q2GED8 50S ribosomal protein L4 n=2 Tax=Neorickettsia RepID=RL4_NEOSM Length = 214 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 4/204 (1%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ ++ V F L+ V+ A R GT K +EV+G+ +KP+ Sbjct: 9 LDFGASSLAGSVAVDRALIEAPFRPDLLSLVINWQLAKRRAGTHKTKGISEVSGTTRKPY 68 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTGRAR GS+++P +R GG+ F + H VNKK+ AL+S LS + RL V Sbjct: 69 RQKGTGRARQGSLRAPQFRKGGIVFGPVVRQHGFSVNKKVRSLALRSALSMRFAEGRLFV 128 Query: 121 VEKFSVEAPKTKLLAQKLKDMA----LEDVLIITGELDENLFLAARNLHKVDVRDATGID 176 +E + K L + A + LI+T E +E L AA NLH V V + + Sbjct: 129 LESSRLGESKAATLLKWFASNAELSVGKKFLIVTEEKNEGLLRAASNLHWVKVLWGSSAN 188 Query: 177 PVSLIAFDKVVMTADAVKQVEEML 200 ++ D V++ +V + + L Sbjct: 189 VYDVVLHDFVLLEKASVDVLVKRL 212 >UniRef50_P49546 50S ribosomal protein L4, chloroplastic n=3 Tax=Bacillariophyta RepID=RK4_ODOSI Length = 215 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 113/180 (62%), Gaps = 7/180 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H+ ++ + + RQGT + KTR+EV G G+KPWRQKGTGRAR+GS +SP+W+ GGV F Sbjct: 37 LIHKDILRHQSSQRQGTISTKTRSEVRGGGRKPWRQKGTGRARAGSSRSPLWKGGGVIFG 96 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVEAPKTKLLAQKLKDMAL- 143 +P+ K+NKK + AL+++L ++ + +++ +++ PKTK K+ + Sbjct: 97 PKPRKIILKLNKKERKLALQTLLYNK--RNNISIIDNLETNLDLPKTKTFYSLCKNCEIN 154 Query: 144 --EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 + +LII GE L LA RN+ V++ A+ ++ SL+ +++MT AVK ++E+ Sbjct: 155 LDQKILIIVGEKTIPLKLATRNIKNVELILASNLNTFSLLKAKQILMTPLAVKDIKEIYC 214 >UniRef50_C1Z9D6 LSU ribosomal protein L4P n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1Z9D6_PLALI Length = 209 Score = 195 bits (497), Expect = 6e-49, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 3/199 (1%) Query: 1 MELVLKDAQS-ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKP 59 + +A N+ L+H VV Y A RQGT K+RAE+ GS +K Sbjct: 6 IHTSTGEATGRNYEFDPAELADSINKQLLHDAVVMYQANLRQGTFKSKSRAEIAGSKQKL 65 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 ++QKGTGRAR G+ + P+ R GG FA RP D S ++ +K + A + L + + + Sbjct: 66 FKQKGTGRARQGNKRQPVRRGGGHAFAKRPTDFSYRLPRKALQLATRMALLGKFQDNEVT 125 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDP 177 ++E ++EAPKTK++A L + LE LI D N++ +ARN+ KV V A G++ Sbjct: 126 IIESLALEAPKTKVVASLLNKLGLESKGCLISIPSHDSNVWKSARNIPKVGVSPAAGLNA 185 Query: 178 VSLIAFDKVVMTADAVKQV 196 L+ ++V+T DA+ + Sbjct: 186 YQLLLRKQLVVTTDALDLL 204 >UniRef50_B5Y986 Ribosomal protein L4/L1 family n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y986_COPPD Length = 208 Score = 195 bits (497), Expect = 6e-49, Method: Composition-based stats. Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 7/207 (3%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M+L + D V+E L+H VV +G R GT + K + EV GS Sbjct: 1 MQLPVFDVNGAEVAYEDVNENLVATPVRGRLLHLNVVRVLSGKRHGTASTKKQGEVAGST 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 +KPW QK TGRAR G ++SPIWR G V F +P+D ++ VNKK + A+ S ++ Sbjct: 61 RKPWPQKHTGRARHGYMRSPIWRKGAVAFGPKPRDWTKDVNKKQVKLAMASCFGYRLKNG 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKL--KDMALEDVLIITGELDENLFLAARNLHKVDVRDATG 174 L++++ S KT+ L K + + V +++ ++ + A +NL V Sbjct: 121 ELLLIDANSFN-GKTREFKAFLRSKQLDEKRVTVVSLAGEQGVRRACQNLENVYYVPVEK 179 Query: 175 IDPVSLIAFDKVVMTADAVKQVEEMLA 201 ++ L+ D V+MT A + +E+ A Sbjct: 180 VNAYDLLKGDAVIMTQSAWVRAQEVWA 206 >UniRef50_B8LSS3 50S ribosomal protein L4 n=6 Tax=Eurotiomycetidae RepID=B8LSS3_TALSN Length = 299 Score = 195 bits (497), Expect = 6e-49, Method: Composition-based stats. Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 6/200 (3%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 S L+H+ VV RQGT + K R +V GSG+K Q Sbjct: 76 FPSMTPLRFEEYSPDHLLVPLRRDLLHRAVVYEGDKTRQGTASTKWRDDVHGSGRKLAPQ 135 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KGTG AR G KSPI R GGV P+D S + +K+Y A + LS + +L+VV+ Sbjct: 136 KGTGNARVGDKKSPIRRGGGVAHGPHPRDFSTDLPRKVYDKAWRIALSYRYTRGQLLVVD 195 Query: 123 KFSVEAPKTKLLAQKLKDMALE-----DVLIITGELDENLFLAARNLH-KVDVRDATGID 176 + ++ ++ L + +DE+LF A + D +D Sbjct: 196 NIQTPDNSSPWFWKRFFEVNLWGKNHGGCTFVKDRMDEDLFGAISEFKQHARILDRPDLD 255 Query: 177 PVSLIAFDKVVMTADAVKQV 196 ++ K+++ A+ ++ Sbjct: 256 VKDILKNGKMIIEQKALNKI 275 >UniRef50_B2S2D7 50S ribosomal protein L4 n=25 Tax=Spirochaetaceae RepID=RL4_TREPS Length = 216 Score = 195 bits (496), Expect = 7e-49, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 5/205 (2%) Query: 1 MELVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 ME + + ++ + E+ FG N +++ + + + R GT K R+EV GS Sbjct: 1 MEKTVYSVEGVALRSVELDESVFGLSVNRGVIYYAINSELSNKRLGTACTKGRSEVHGSN 60 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQD 116 KP++QKGTGRAR G KSP+ GG F +P+D + KK+ R A+KS+LS + D Sbjct: 61 TKPYKQKGTGRARRGDKKSPLLVGGGTIFGPKPRDFHYALPKKVKRLAMKSLLSLKAQGD 120 Query: 117 RLIVVEKFSVEAPKTKLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGI 175 L V+E F+VE+ KT+ L Q L+ A + I D L A RN+ + + Sbjct: 121 ALTVIEDFTVESGKTRDLIQVLRHFAQRERTVFILQNDDALLKRAGRNIPTLSFLSYNRL 180 Query: 176 DPVSLIAFDKVVMTADAVKQVEEML 200 L KV++ AV ++ + Sbjct: 181 RAHDLFYGRKVLVLETAVHKIADFY 205 >UniRef50_D1J751 Chloroplast 50S ribosomal protein L4 n=2 Tax=Phaeophyceae RepID=D1J751_ECTSI Length = 232 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 116/200 (58%), Gaps = 7/200 (3%) Query: 6 KDAQSALTVSETT-FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 ++ ++++ G++ + ++++ +A RQGT TRAEV G G+KPWRQKG Sbjct: 33 EEKNETVSLTLQIKEGQETDNYILYRAYIAQRTNERQGTVNTLTRAEVKGGGRKPWRQKG 92 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE-K 123 TGRAR+GS +SP+W+ GGV+F +P+ + K+N+K ++ A++ ++ + + +++ Sbjct: 93 TGRARAGSNRSPLWKGGGVSFGPKPKTYINKLNRKEWQLAVRGLIILK--EPSITIIDHN 150 Query: 124 FSVEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 FS KT + K + +++ I ++ENLF RN+ V + A ++ ++L Sbjct: 151 FSSIDNKTNIFINLFKGCDISFSKNITFIVPAIEENLFKVTRNIKTVTIMRADTLNLITL 210 Query: 181 IAFDKVVMTADAVKQVEEML 200 + D + ++ D++K +EE+ Sbjct: 211 LESDHLFISKDSLKIIEEIY 230 >UniRef50_Q0FQD6 50S ribosomal protein L4 (Fragment) n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FQD6_9RHOB Length = 177 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 60/174 (34%), Positives = 99/174 (56%), Gaps = 4/174 (2%) Query: 1 MELVLKD--AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKK 58 ++++ D A + +++ F + ++H+VV A+ GT KTR+EV+ S KK Sbjct: 3 LDVIKLDGGAAGEVELTDEIFDLEPRADILHRVVRWQRNKAQAGTHKVKTRSEVSYSTKK 62 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRL 118 +RQKGTG AR GS K+PI+R GG+ P+ H+ + KK+ + LK LS + L Sbjct: 63 IYRQKGTGGARHGSRKAPIFRKGGIYKGPTPRSHAHDLPKKVRQLGLKLALSAKAKAGSL 122 Query: 119 IVVEKFSVEAPKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRD 171 +++E + KTK LA ++K++ + L+I G E++EN AA N+ +DV Sbjct: 123 VIIENADAD-GKTKTLASQVKNLGWKRALVIDGAEVNENFARAAANIDGLDVLP 175 >UniRef50_A2R423 Contig An14c0190, complete genome n=6 Tax=Trichocomaceae RepID=A2R423_ASPNC Length = 289 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 7/201 (3%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + + + ++H+ VV RQGT + K R +V GSG+K Q Sbjct: 72 FPSMEPLRFVEYPRNHLLMPLRKDILHRAVVYEGDMTRQGTASTKWRDDVHGSGRKLHAQ 131 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KGTGRAR G KSPI R GGV F P+D S ++ +K+Y A + LS ++ +LI+V+ Sbjct: 132 KGTGRARVGDKKSPIRRGGGVAFGPHPRDFSTELPQKIYDQAWRIALSYRYKRGQLIIVD 191 Query: 123 K-FSVEAPKTKLLAQKLKDMALE-----DVLIITGELDENLFLAARNL-HKVDVRDATGI 175 ++ T + +++ + +IT + +E LF R + D + Sbjct: 192 NEIALPEGATPHIVEEIFKVNCWGRHYGRSTLITDQPNEELFETVRQAGEHAKILDRRDV 251 Query: 176 DPVSLIAFDKVVMTADAVKQV 196 D L+ ++++ A+ ++ Sbjct: 252 DVKDLLETGRLIIEKQALDRI 272 >UniRef50_Q4PHH8 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PHH8_USTMA Length = 438 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 66/250 (26%), Positives = 103/250 (41%), Gaps = 56/250 (22%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 +++ + +S F ++H VV Y R GT + K R++V GS +K QKG+G+ Sbjct: 143 SKAYVPLSAHVFDAPARRDVIHSAVVYYLDAQRSGTASTKGRSDVRGSMRKLRPQKGSGQ 202 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR G++ +PI R G V RP+DHS K+ +++ AL+S LS RQ L+VVE + Sbjct: 203 ARLGTMSNPILRGGAVAHGPRPRDHSTKLPRRVRELALRSALSSKWRQGNLLVVENLNWT 262 Query: 128 AP--KTKLLAQKLKDMALEDVLIITGELDE------------------------------ 155 AP T LA+ L D L +T D Sbjct: 263 APPSSTGPLARLLGSKGWSDALFLTAPRDPQPSMRSLIKDARPSSSDPIYDEHQKLSHQQ 322 Query: 156 ---NLFLAARNLHKVDVRDAT---------------------GIDPVSLIAFDKVVMTAD 191 N LA+ NL + ++ + + ++ KV+ Sbjct: 323 AIRNFVLASNNLPRAELIELDSLTEEYRDNIAKTSDDKKKPGELHAYEVLRRHKVICDLG 382 Query: 192 AVKQVEEMLA 201 AV+ +EE L Sbjct: 383 AVEWLEEKLG 392 >UniRef50_UPI0001509D48 ribosomal protein L4/L1 family protein n=1 Tax=Tetrahymena thermophila RepID=UPI0001509D48 Length = 358 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 103/193 (53%), Gaps = 2/193 (1%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 + + F +VH V+ T KT+ V+GSGKKP+ QKGTG+AR Sbjct: 89 KTVDLDHDIFNVPLRRDIVHSYVLWRQNRDEIKTHITKTKGTVSGSGKKPYAQKGTGKAR 148 Query: 70 SGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAP 129 G+ ++P + GG A+P+ +NKK+ ALK +LS + + +L ++E V+ P Sbjct: 149 MGNKRAPGRKKGGKAHGAKPRILRYPLNKKIRLQALKVVLSAKLAEGKLRIIETEQVDEP 208 Query: 130 KTKLLAQKLKDMALED-VLIITG-ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 KT+ +A+ L+ M +LI+ ++D N LA +N+ K+ + + ++ D+V Sbjct: 209 KTRAIAKMLEKMDKRSRILIVHPYQIDTNFELAHQNIQKLQSCYPNELSVLKVLTNDRVF 268 Query: 188 MTADAVKQVEEML 200 +T +A++Q+ + L Sbjct: 269 ITLEALRQLTQEL 281 >UniRef50_C1FJ75 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1FJ75_9CHLO Length = 190 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 5/192 (2%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 +T+ F + H+VVV + R TR+EV+G+ +K QKG GRAR Sbjct: 2 TVTLPGRHFDVPLRVDIAHRVVVWQRSKRRGNYAKTLTRSEVSGTTRKARAQKGAGRARV 61 Query: 71 GSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE-A 128 G++++P R GGV ++ + K+ +++ R L+ LS + R++V++ Sbjct: 62 GTLRAPQMRGGGVAHGPSGMRNWNTKLQRRVRRAGLQVALSAKAAEGRIVVLDSLHRGVE 121 Query: 129 PKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 PKT+ L L + L N A+ NL V V D G++ ++ + + Sbjct: 122 PKTQWLDGALDTLLGAQKL---PTTHSNAKRASLNLPHVQVMDQFGLNVYDVLRHRSLAI 178 Query: 189 TADAVKQVEEML 200 T DA+ + L Sbjct: 179 TRDALDALVARL 190 >UniRef50_O74801 60S ribosomal protein yml6, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=RL4P_SCHPO Length = 261 Score = 192 bits (489), Expect = 5e-48, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 14/214 (6%) Query: 2 ELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWR 61 + + S + + F ++H+ V+ A RQGT + K R E+T SG+K +R Sbjct: 12 KFPSLEPASLFLIPGSFLQERFRRDILHRAVIYEADNDRQGTASSKRRNEITCSGRKLYR 71 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV 121 QKGTG AR G SPI R G + +P+D S K+ ++Y A++ LS + L ++ Sbjct: 72 QKGTGHARVGDASSPIRRGGAKSHGPKPRDFSTKLQTQVYNLAMRIALSTRFINNELTIL 131 Query: 122 EK-FSVEAPKTKLLAQKLKDMAL----EDVLIITGE--------LDENLFLAARNLH-KV 167 E ++ PKT++L + LK L L + + + NL LA+R L Sbjct: 132 ENPINLSQPKTRILLEVLKQHKLGHEYGKALFVLNDNYFEDESLKNNNLLLASRQLGYHC 191 Query: 168 DVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 + F K+ + ++A+ + E A Sbjct: 192 SFIPVGEFQVRDALKFGKLFIDSEAMSLIVEKFA 225 >UniRef50_B1ZNE7 Ribosomal protein L4/L1e n=3 Tax=Verrucomicrobia RepID=B1ZNE7_OPITP Length = 210 Score = 192 bits (488), Expect = 6e-48, Method: Composition-based stats. Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 1/182 (0%) Query: 19 FGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIW 78 F D V +V+VA A RQGT + KTR EV G GKKPWRQKGTGRAR+GSI+SP+W Sbjct: 23 FEGDKGLQAVKEVIVAINANNRQGTHSTKTRGEVRGGGKKPWRQKGTGRARAGSIRSPLW 82 Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKL 138 GGV F +P+D+S+K+N K+ + A L + + V+E F +A KTK Q L Sbjct: 83 GGGGVVFGPKPRDYSKKINAKVKQLAFSRALFDRASAGEIAVIEAFDSKATKTKAFNQIL 142 Query: 139 KDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVE 197 +A + VL++ A+RNL +V +++A ++ + L + K+++++ A++ + Sbjct: 143 GRIAPKGKVLLVDAPFAAEAARASRNLERVTLQEAAKLNTLDLAQYQKIIVSSKALEAII 202 Query: 198 EM 199 Sbjct: 203 AR 204 >UniRef50_B7P338 Ribosomal protein L4, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7P338_IXOSC Length = 295 Score = 192 bits (488), Expect = 6e-48, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 7/201 (3%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 ++ V + + + F +H + R +TRAE G G+KPW Sbjct: 79 LDTVESEKLGLVPLHPKIFAGFPRIDTLHWNIHWQKNYQRVDWATAQTRAERRGGGRKPW 138 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKGTGRAR GSI++P W+ GGV+ R P+ + + L + LS Q Sbjct: 139 PQKGTGRARHGSIRAPQWKGGGVSMGPRGPRTYFYMLPFFRRVEGLITALSVKFAQ---- 194 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 V + T T + +N+ +A + +++ G++ S Sbjct: 195 -VTEMLCTFLCTSRATSHSSRFGW-HCFRSTDYVPKNIAVACDQIKHMNIMPVYGLNVHS 252 Query: 180 LIAFDKVVMTADAVKQVEEML 200 ++ +D +V+T A +++E L Sbjct: 253 MLKYDTLVLTLSAAEEIEAKL 273 >UniRef50_B4SKW4 50S ribosomal protein L4 n=13 Tax=Xanthomonadaceae RepID=RL4_STRM5 Length = 201 Score = 191 bits (487), Expect = 8e-48, Method: Composition-based stats. Identities = 112/202 (55%), Positives = 144/202 (71%), Gaps = 2/202 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 MELV+ + + ++VS+ FGRDF+E LVHQVVVAY R GT+AQKTR+EV G+ KK Sbjct: 1 MELVITGSNNKVSVSDAVFGRDFSEDLVHQVVVAYRNAGRAGTKAQKTRSEVAGTTKKSK 60 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 +QKG AR G++ +PI+ GGVTFAA+P+ QKVN+K YR A+ +ILSEL RQ RL + Sbjct: 61 KQKGG-GARHGALTAPIFVGGGVTFAAKPRSFEQKVNRKQYRAAMCAILSELNRQGRLTI 119 Query: 121 VEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 VE F VE TK L KL + + + LI+T E E+L+L+ARNL V VRD G+DPVS Sbjct: 120 VESFDVEVTNTKGLIAKLAGLEVGKRPLIVTEEASEHLYLSARNLPYVQVRDVQGLDPVS 179 Query: 180 LIAFDKVVMTADAVKQVEEMLA 201 L+ D VV+TADAVK+VEE LA Sbjct: 180 LVGADTVVITADAVKKVEEWLA 201 >UniRef50_Q04PT9 50S ribosomal protein L4 n=23 Tax=Leptospira RepID=RL4_LEPBJ Length = 211 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 3/199 (1%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 S + + F + A +++ + A A R G A KTR+EV G GKKPW QKGT Sbjct: 10 GKLISEIELPSALFESKLSVASIYEAIKAENANLRSGNHATKTRSEVRGGGKKPWSQKGT 69 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 G AR GS ++P W GG + +D+S KV+ K+ A+ SIL++ + + V+E Sbjct: 70 GHARQGSTRAPHWVGGGTVHGPQKRDYSYKVSSKLKHKAVLSILNKKAQASAVKVIEDLD 129 Query: 126 VEAPKTKLLAQKLKDMALEDVLII---TGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 + TK K+M L + +I + + + RN+ V ++ I ++ Sbjct: 130 PKEYSTKSFDSIFKNMNLRNTGVIGFLVQGESDFVKKSVRNIPTVKYINSKRISCRDILY 189 Query: 183 FDKVVMTADAVKQVEEMLA 201 +V+T A+ ++ Sbjct: 190 NRNLVITEAALNEMLTQYG 208 >UniRef50_A4S817 Plastid ribosomal protein L4 large ribosomal subunit n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S817_OSTLU Length = 251 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 7/199 (3%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 SA T+ T + LVH+ VV AR+GT + T++EV G G+KP++QKGTG Sbjct: 48 KSSAATLELKTARAEVARGLVHKYVVMVRQNARRGTASTLTKSEVRGGGRKPFKQKGTGN 107 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--S 125 AR+GS ++P+ GGV+F +P+D S K+NKK R A+ + L +IVV+ + Sbjct: 108 ARAGSSRTPLKPGGGVSFGPKPRDWSIKMNKKERRLAMATALQSAASA--MIVVDDISGN 165 Query: 126 VEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 + AP T + L + E +IT + +EN+ +ARN+ +V D + ++ ++ Sbjct: 166 ISAPGTNAFNKSLMAWGVGASEKAYVITKDANENVAKSARNIERVVQTDVSHLNVYDILN 225 Query: 183 FDKVVMTADAVKQVEEMLA 201 DKV++ A A+ + Sbjct: 226 ADKVIVEASALAHISSFFG 244 >UniRef50_Q7UN19 50S ribosomal protein L4 n=1 Tax=Rhodopirellula baltica RepID=RL4_RHOBA Length = 222 Score = 189 bits (482), Expect = 3e-47, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 109/196 (55%), Gaps = 2/196 (1%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 + ++ L+H VVV Y A RQG+ +TR +V+G+ KK +RQKG Sbjct: 10 SGKEVGQYEIDTEQIANRVSKQLLHDVVVMYQANKRQGSHNTRTRGQVSGTNKKMYRQKG 69 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 TG AR+GS ++ + R GGV +P+D+S ++ KK + A + + + ++V+ + Sbjct: 70 TGNARAGSKRTNVRRGGGVARTVKPRDYSYRLPKKAIKIATRMAIRSRIDDGEIVVINEL 129 Query: 125 SVEAPKTKLLAQKLKDMALED--VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 ++APKT +AQ LK++ L + LI T D+ ++ + RN+ V V ++ ++L+ Sbjct: 130 KLDAPKTSQIAQILKNLGLANTTTLIATAGDDQIIYKSGRNISGVTVEPVRQLNALTLLT 189 Query: 183 FDKVVMTADAVKQVEE 198 +V+ T +A+ +V++ Sbjct: 190 PKRVLFTQEALDRVKD 205 >UniRef50_Q1AU30 50S ribosomal protein L4 n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RL4_RUBXD Length = 211 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 3/190 (1%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69 S + + F + + ++H+ VVA R+ T + + R+EV GSG K +RQKGTGRAR Sbjct: 15 SEMELKGPRFETEPKQHVIHRAVVAELEARRRWTASTRERSEVAGSGAKLYRQKGTGRAR 74 Query: 70 SGSIKSPIWRSGGVTFAARPQ--DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 +G IKSP+ GG +P+ + +K+N+K R A LS + RL V++ E Sbjct: 75 AGDIKSPLRHGGGTWGGPKPKGPRYGKKINRKEARAAFDGALSAKAAEGRLYVLDALDFE 134 Query: 128 APKTKLLAQKLKDMALED-VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 P TK + L M +E VL++ + L+ RNL +V V G L+ +V Sbjct: 135 RPSTKRAKELLGQMGVEGPVLLVLDGEEREAALSFRNLPEVTVVGPRGYGVYELLRAREV 194 Query: 187 VMTADAVKQV 196 V + A ++ Sbjct: 195 VFSRAAYGRL 204 >UniRef50_B2WIG6 50S ribosomal protein L4 n=5 Tax=Leotiomyceta RepID=B2WIG6_PYRTR Length = 575 Score = 188 bits (479), Expect = 8e-47, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 6/201 (2%) Query: 2 ELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWR 61 + + ++H+ VV R GT + KTR EV GS +K Sbjct: 73 QFPSLEPLRFEKYPANHLYLPTRRDILHRAVVYEGDATRLGTASTKTRHEVHGSRRKVRP 132 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV 121 QKGTG AR G SP+ R GGV F +P+D S ++ KK+Y A ++ LS R+ LI+V Sbjct: 133 QKGTGHARLGDRMSPMLRGGGVAFGPKPRDFSSELPKKVYDLAFRTALSYRFRKGELIIV 192 Query: 122 EK-FSVEAPKTKLLAQKLKD----MALEDVLIITGELDENLFLAARNLHKVD-VRDATGI 175 + +E+P T+LLA + L++T E L A ++ + + Sbjct: 193 DNAMELESPSTRLLADIFRHHEKLWGRGRSLMVTLEERPLLEQALVDMDRRKQAILWNKV 252 Query: 176 DPVSLIAFDKVVMTADAVKQV 196 D L+ ++++ DA++ + Sbjct: 253 DVKYLLELSRIIIERDALQNI 273 >UniRef50_D0RNM6 Ribosomal protein, L4/L1 family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNM6_9RICK Length = 209 Score = 188 bits (478), Expect = 9e-47, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 3/200 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + +L S+ F + ++ QV+ + T K+R EV GS KK +QK Sbjct: 8 IDGKNVGSLEASDKVFKVKPRKDIIQQVIDWQQNRMFKKTGHTKSRGEVKGSRKKIVQQK 67 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQ-DHS-QKVNKKMYRGALKSILSELVRQDRLIVV 121 G+G AR G+I +P++ GG+ R + +++ +K+NKK+ + L LS + D++ + Sbjct: 68 GSGGARHGNITAPVFVGGGIAHGPRHRGNYAVKKLNKKVRKLGLVHALSVKAKSDQIAIF 127 Query: 122 EKFSVEAPKTKLLAQKLKDMALEDVLII-TGELDENLFLAARNLHKVDVRDATGIDPVSL 180 + + KTK LK++ + L I + + + +N+ + G + L Sbjct: 128 NEPKISGLKTKNFKDFLKNIKSKSALFIHHKDAPKEFVRSIKNIPNSKKLEDVGTNVYDL 187 Query: 181 IAFDKVVMTADAVKQVEEML 200 I ++KV+ T ++ K +EE L Sbjct: 188 IKYEKVLFTKESFKAIEERL 207 >UniRef50_Q84U22 Plastid ribosomal protein L4 n=1 Tax=Chlamydomonas reinhardtii RepID=Q84U22_CHLRE Length = 243 Score = 188 bits (478), Expect = 9e-47, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 9/200 (4%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 ++ ++ D + LVH+ +V ARQGT + TR+EV G GKKP+ QKGTG Sbjct: 40 SKGTQQLALKV-AEDSAKGLVHRYLVMVQQNARQGTASTLTRSEVRGGGKKPYAQKGTGN 98 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--S 125 AR GS SP++ GGVTF +P+D S +NKK R AL + L +IVVE Sbjct: 99 ARRGSSVSPLFPGGGVTFGPKPKDWSISMNKKERRLALATALQSATA--DMIVVESLAGK 156 Query: 126 VEAPKTKLLAQKLKDMAL----EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 ++ KTK + L+ + VL+IT E ++ LA RN+ K+ + A+ I ++ Sbjct: 157 LQDTKTKSMVALLEKLGANAMERKVLLITKEERPDVTLAGRNIAKLTMNTASAISVFDVL 216 Query: 182 AFDKVVMTADAVKQVEEMLA 201 D +++ +A+ V+ Sbjct: 217 NADHIIIEDEALAHVQSFYG 236 >UniRef50_Q7XYP3 Ribosomal protein rpL4 (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XYP3_BIGNA Length = 335 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 10/209 (4%) Query: 1 MELVLKD--AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKK 58 +E+ D + +S + + LVH+ ++ R GT + KT++EV G GKK Sbjct: 114 LEVKNFDGQVVGSDDMSLKVARPETAKGLVHRYLMYARNSMRAGTASTKTKSEVRGGGKK 173 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRL 118 P++QK TG AR GS ++P+ GG+ F +P+D S +N+K R A+ + L + Sbjct: 174 PYQQKKTGNARQGSRRTPLKPGGGIIFGPKPRDWSVDMNQKERRIAMATALQS--ASSDV 231 Query: 119 IVVEKFS--VEAPKTKLLAQKLKDMALE----DVLIITGELDENLFLAARNLHKVDVRDA 172 I+VE E+PKTK +A L + + VL++ N L+ARN+ K+ + Sbjct: 232 ILVEDLDGKFESPKTKNMADFLDRVGAKPSEEKVLLVVEGQKRNALLSARNIDKLKINKP 291 Query: 173 TGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 T + + ++ DK++M A + ++ + Sbjct: 292 TSLRIIDVLGADKIIMEKKAFETMKNIFG 320 >UniRef50_C4XG14 Putative uncharacterized protein n=2 Tax=Mycoplasma RepID=C4XG14_MYCFE Length = 378 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 105/191 (54%), Gaps = 8/191 (4%) Query: 14 VSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGS 72 + + F E + ++A A RQGT K R+EV+G GKKPWRQKGTGRAR+GS Sbjct: 189 LPKELFASPKIYEQAIFDTIMADRASRRQGTHDVKNRSEVSGGGKKPWRQKGTGRARAGS 248 Query: 73 IKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 +SPIW GG F P +++S KVNKK+ R A S L+ L+ + +V++ F + T Sbjct: 249 TRSPIWVGGGRAFGPTPERNYSLKVNKKVRRAAFLSALT-LLSNKKSVVIDDFKMSKIST 307 Query: 132 KLLAQKLKDMALED---VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 K KLK + +E+ +L++T DE ++ + NL V + +L+ D +V+ Sbjct: 308 KDAVNKLKSLKIENLKHILVVT--TDETVYKSTANLQNVLCVKPNSVSVENLVWADVLVL 365 Query: 189 TADAVKQVEEM 199 + + +K E Sbjct: 366 SNEGLKNFEGR 376 >UniRef50_Q252V4 50S ribosomal protein L4 n=15 Tax=Chlamydiaceae RepID=RL4_CHLFF Length = 224 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 13/204 (6%) Query: 6 KDAQSALTVSETTFGRDFN-EALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKG 64 + + + + F ++ N LV +VA A RQ + + R+EV+ S KKP+RQKG Sbjct: 11 GNKAGEVELPDAFFAQEGNGLQLVKDYIVAIRANKRQWSACTRNRSEVSHSTKKPFRQKG 70 Query: 65 TGRARSGSIKSPIWRSGGVTFAARPQ-DHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 TG AR G + +P +R GG+ F +P+ D ++NKK R A++ +LS+ ++ +RLIV + Sbjct: 71 TGNARQGCLAAPQFRGGGIVFGPKPKFDQHVRINKKEKRAAIRLLLSQKIQTNRLIVADD 130 Query: 124 F----SVEAPKTKLLAQKLKDMAL--EDVLIITG----ELDENLFLAARNLHKVD-VRDA 172 S+ APKTK + LK + VL I + +E L L+ RNL V Sbjct: 131 SVFTKSLTAPKTKEALRFLKSCNVECRGVLFIDDLNHAQNNEGLRLSLRNLPAVRGFAYG 190 Query: 173 TGIDPVSLIAFDKVVMTADAVKQV 196 ++ L++ +V++ A+ + Sbjct: 191 MNVNGYDLVSARNIVISEKALTGL 214 >UniRef50_D0J9J1 50S ribosomal subunit protein L4 n=2 Tax=Blattabacterium RepID=D0J9J1_BLASP Length = 210 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 116/207 (56%), Gaps = 7/207 (3%) Query: 1 MELVLKDAQSA-----LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGS 55 MEL + D + + +E F + + ++ V Y + RQGT K R E++GS Sbjct: 1 MELEILDIKGNSTNRKVLFNEKFFSKKSYDHPIYLEVKRYLSAQRQGTHKSKERGEISGS 60 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQ 115 +K RQKGTG +R G IK+P++R GG F P+ + K+NK A K+I+ ++ Sbjct: 61 RRKLHRQKGTGGSRKGDIKNPLFRGGGRVFGPTPRRYFMKINKLTKNLAKKNIIEHKLKT 120 Query: 116 DRLIVVEKFSVEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDAT 173 ++ ++E F ++ PKTKL+ LK + L E L+I + D NL L+ARNL + +A Sbjct: 121 KKVKIIEDFQLKKPKTKLVLNILKSLQLMNEKSLMIVEKADRNLHLSARNLKNFQLLNAE 180 Query: 174 GIDPVSLIAFDKVVMTADAVKQVEEML 200 ++ SL+ V+++ ++VK++E +L Sbjct: 181 ELNSYSLLNSSYVILSENSVKRIERIL 207 >UniRef50_O50061 50S ribosomal protein L4, chloroplastic n=23 Tax=cellular organisms RepID=RK4_ARATH Length = 282 Score = 186 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 6/202 (2%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + + D A+VH+ +V R+GT + TR EV G G KP+ QK T Sbjct: 61 GEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIKPYSQKKT 120 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRG-ALKSILSELVRQDRLIVVEKF 124 G AR GS ++P+ GGV F RP+D S K+N+K + ++ S + IVVE+F Sbjct: 121 GHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGGAIVVEEF 180 Query: 125 --SVEAPKTKLLAQKLKDMAL---EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 E PKTK ++ L E + + ++DEN+ ++RN+ + + ++ Sbjct: 181 GEKFEKPKTKDFLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFD 240 Query: 180 LIAFDKVVMTADAVKQVEEMLA 201 ++ DK+V+T AV+ + Sbjct: 241 ILNADKLVLTPAAVEFLNARYG 262 >UniRef50_Q8D211 50S ribosomal protein L4 n=2 Tax=Gammaproteobacteria RepID=RL4_WIGBR Length = 201 Score = 186 bits (473), Expect = 3e-46, Method: Composition-based stats. Identities = 110/185 (59%), Positives = 146/185 (78%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 MEL+ D++ + +SE FG+ FNE+LVHQVV +Y RQGT AQK+R+EV GSGKKPW Sbjct: 1 MELLCIDSKEKVKISEKIFGQKFNESLVHQVVRSYRITKRQGTSAQKSRSEVIGSGKKPW 60 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTGRAR+GS+KSPIWRSGGVTFA + +D K+NKKMY+ ALKSI SEL RQ+R+++ Sbjct: 61 RQKGTGRARAGSVKSPIWRSGGVTFAKKTRDFKHKINKKMYKNALKSIFSELCRQNRILI 120 Query: 121 VEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL 180 V+ F V++ KTKLL +KL +M LE+VLII+ +D+NL L++RNL+KV V I+P++L Sbjct: 121 VKNFFVKSEKTKLLKKKLNEMNLENVLIISKTIDKNLVLSSRNLNKVHVCFPININPINL 180 Query: 181 IAFDK 185 I+F K Sbjct: 181 ISFKK 185 >UniRef50_B2UMT9 Ribosomal protein L4/L1e n=2 Tax=Verrucomicrobiaceae RepID=B2UMT9_AKKM8 Length = 202 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 113/202 (55%), Gaps = 1/202 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 M ++A + G D VH ++VAY A R G+ KTRAEV+G+ KK + Sbjct: 1 MSANTFTLEAAAAANIQVVGSDKGSQAVHDLIVAYQANRRTGSANSKTRAEVSGNNKKIF 60 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKGTG AR G ++PI+ GGV F RP D+S+KVNK R AL+ +L +L+ ++ Sbjct: 61 RQKGTGNARHGDKRAPIFVGGGVVFGPRPCDYSKKVNKSTRRLALRRVLGDLIAASKVST 120 Query: 121 VEKFSVEAPKTKLLAQKLKDM-ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 V +FSV KTK + +KD+ + VLI+ DE + AARN+ +V + A ++ Sbjct: 121 VSEFSVADGKTKSFIKAVKDLTDAKKVLIVAASFDETTYRAARNVQEVLLMTAAEVNIEQ 180 Query: 180 LIAFDKVVMTADAVKQVEEMLA 201 L+ D V++ +A++ + A Sbjct: 181 LMNADAVILVDNALETLASRTA 202 >UniRef50_P75579 50S ribosomal protein L4 n=2 Tax=Mycoplasma RepID=RL4_MYCPN Length = 212 Score = 186 bits (472), Expect = 5e-46, Method: Composition-based stats. Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 5/194 (2%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + +S ++ + V V+ A RQGT + T+ EV G GKKP++QK TG+AR G Sbjct: 18 VKLSPGLIAKELKQQPVFDAVLVEQASWRQGTHSILTKGEVRGGGKKPYKQKHTGKARQG 77 Query: 72 SIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK--FSVEA 128 S ++P + GG+ F +P +++S K+NKK + AL ++ SE + D +V++ F+ Sbjct: 78 STRNPHFVGGGIVFGPKPNRNYSLKLNKKAHTAALHTVWSEKLASDNTHLVDQNLFNKTE 137 Query: 129 PKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 KTK++ Q LK L ++VL + L+ NL + N+ V V+ + L+ + + Sbjct: 138 GKTKVMMQFLKSAKLLDKNVLFVVNTLNTNLEQSTSNIKNVQVKHLDKVSVRDLMLANAL 197 Query: 187 VMTADAVKQVEEML 200 ++ + +K +E Sbjct: 198 LVEKEVLKALEGKF 211 >UniRef50_B8BX09 RM4, ribosomal protein 4 (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8BX09_THAPS Length = 199 Score = 186 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 7/198 (3%) Query: 10 SALTVSETTFGR-DFNEALVHQVVVAYAAGAR---QGTRAQKTRAEVTGSGKKPWRQKGT 65 ++ +S TFG ++H+ VV R KT EV+GSG+K QKG Sbjct: 2 GSIHLSAHTFGCDPIRVDILHRCVVYQRNKRRGKRNAGARTKTIHEVSGSGRKVRNQKGG 61 Query: 66 GRARSGSIKSPIWRSGGVTFAAR--PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 G AR+G + WR G + QD++ K+NKK+ + ++ LS+ + + LIV+ Sbjct: 62 GVARAGHSRPAHWRGGAKAHGPKGSVQDYTTKLNKKVRKMGVRHALSQKLLEGNLIVMGD 121 Query: 124 FSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 + ++ KTK L + L + + G L+ NL +A+ NL KV V + G + L+ Sbjct: 122 LNAKSHKTKELEEALGRFGIAGKKGTVYGGLNVNLKVASGNLFKVKVMNQLGTNVYDLLK 181 Query: 183 FDKVVMTADAVKQVEEML 200 +K+V++ AVK +EE L Sbjct: 182 HEKLVLSLSAVKALEERL 199 >UniRef50_C8V2I4 50S ribosomal protein L4 (AFU_orthologue; AFUA_5G12800) n=9 Tax=Eurotiomycetidae RepID=C8V2I4_EMENI Length = 287 Score = 185 bits (471), Expect = 6e-46, Method: Composition-based stats. Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 7/201 (3%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + + + + ++H+ VV RQGT + K R +V GS +K + Q Sbjct: 70 FPTMEPVQFVEYARNHLMMPLRKDILHRAVVYEGDMTRQGTASTKWRGDVHGSNRKLYAQ 129 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KGTGRAR G KSPI R GGV F P+D S ++ +K+Y A + LS R+ +LI+++ Sbjct: 130 KGTGRARVGDKKSPIRRGGGVAFGPHPRDFSTELPRKIYDQAWRIALSYRYRRGQLIIID 189 Query: 123 K-FSVEAPKTKLLAQKLKDMALE-----DVLIITGELDENLFLAARNL-HKVDVRDATGI 175 + T +++ +IT + E LF R++ + D + Sbjct: 190 NEIGIPEDATPYFIKEIFKFNRWGREFGRSTLITDRVHEELFETVRSVGEDAKILDRGDV 249 Query: 176 DPVSLIAFDKVVMTADAVKQV 196 D L+ ++++ A+ ++ Sbjct: 250 DVKDLLETGRLIVEKRALDRI 270 >UniRef50_B7T1Y3 Ribosomal protein L4 n=1 Tax=Vaucheria litorea RepID=B7T1Y3_VAULI Length = 220 Score = 185 bits (470), Expect = 9e-46, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 112/202 (55%), Gaps = 8/202 (3%) Query: 5 LKDAQSALTVS-ETTFGRDFNEA--LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWR 61 K+ + LT++ + N++ L+H+ + RQGT KTRAEV G G+KPW+ Sbjct: 18 NKENITTLTLNIPKHYESKINKSNYLLHRALQTQLTNERQGTSNTKTRAEVQGGGRKPWK 77 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV 121 QKGTGRAR+GS +SP+WR GGV F + + S K+N+K +R +L+ +L Q + ++ Sbjct: 78 QKGTGRARAGSNRSPLWRGGGVIFGPKIKKFSNKINRKEWRLSLRLLLLNK--QKNITII 135 Query: 122 EKFSVEAPKTKLLAQKLKDMALE---DVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 ++ KTK + Q + + ++ ++II DENL +NL V + A ++ Sbjct: 136 NTIFLDFFKTKNIIQYILKLGIDPLQKLVIIIPNYDENLRRGTKNLKNVQLLKANCLNIK 195 Query: 179 SLIAFDKVVMTADAVKQVEEML 200 ++ + + + +++K +EE Sbjct: 196 DILKAEHIFIDINSLKIIEETY 217 >UniRef50_C1BS34 Mitochondrial 39S ribosomal protein L4 n=1 Tax=Lepeophtheirus salmonis RepID=C1BS34_9MAXI Length = 275 Score = 185 bits (470), Expect = 9e-46, Method: Composition-based stats. Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 5/194 (2%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + +G ++ + + K R E+ G G +PW QKGTGRAR Sbjct: 59 VDLHPDVWGVAPRLDIIADNLKWQENYKKVEYNYVKDRYELPGKGARPWPQKGTGRARHK 118 Query: 72 SIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF-SVEAP 129 S +SPIW GG + P+ + + + L LS QD +I+V+ F +E+ Sbjct: 119 SKRSPIWLQGGKAHGPKGPKTNFFMLPYQHRVNGLIHTLSVKFAQDDIIIVQNFDDLEST 178 Query: 130 KTKLLAQKLKDMALE-DVLIITGE--LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 + L + + L + G+ EN+ A+ ++ V+V + G++ S++ + Sbjct: 179 DPEDLEDLISERGWGLSTLFVNGDSIAPENITAASESILHVNVMPSFGLNVHSMLKHKTL 238 Query: 187 VMTADAVKQVEEML 200 V+T DAV +E+ L Sbjct: 239 VLTLDAVNLIEDKL 252 >UniRef50_C7Z3X5 Predicted protein n=3 Tax=Sordariomycetes RepID=C7Z3X5_NECH7 Length = 321 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 93/221 (42%), Gaps = 25/221 (11%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + + S ++H VV RQGT + K R E+ GS +K Q Sbjct: 72 FPSLEPTALEQWSINHLYLPLRRDILHLAVVFEGDNTRQGTASTKNRWEINGSHRKMRPQ 131 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KGTGRAR G+ +SP+ R GG F +P+D +N+K+Y A ++ LS R+ LIV E Sbjct: 132 KGTGRARLGTKQSPLLRGGGKVFGPKPRDFGTGLNRKVYDKAWRTALSYRYRKGDLIVCE 191 Query: 123 ---------KFSVEAPKT-----------KLLAQKLKDMAL----EDVLIITGELDENLF 158 F + A K K + L ++ L L +TG E LF Sbjct: 192 DGMDLALPTDFELLAGKYLKDGMKETYLKKYMTGMLGNLGLGRASGRTLFVTGNRREALF 251 Query: 159 LAARNLHKV-DVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 A + D +D L+ KVV+ +K++ E Sbjct: 252 EAMEQVPWEGRALDLEDVDVKDLLETGKVVLERSVLKEMIE 292 >UniRef50_Q7VQE7 50S ribosomal protein L4 n=7 Tax=Gammaproteobacteria RepID=RL4_BLOFL Length = 212 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 103/193 (53%), Positives = 145/193 (75%), Gaps = 2/193 (1%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 ++VS+ FG FN AL+HQ+V +Y RQG+++QK+R++V+GS KKPWRQKGTGRARS Sbjct: 20 NVSVSDKVFGYPFNPALIHQIVSSYLINCRQGSKSQKSRSDVSGSNKKPWRQKGTGRARS 79 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 GS+KSPIWRSGGVTFA++P+ + QK+NKKMY+GA+KSILS+LV +RL ++E +E PK Sbjct: 80 GSVKSPIWRSGGVTFASKPKKYDQKINKKMYKGAMKSILSKLVCDNRLFLIEDLFLEKPK 139 Query: 131 TKLLAQKLKDM-ALEDVLIITGEL-DENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 T LL +KLK++ + VLI+T + D+NL LA+ NLH V + + IDPVSLI F+ ++ Sbjct: 140 TNLLLKKLKNITSDRSVLIVTDNVIDKNLILASSNLHTVKIYNLNSIDPVSLINFNITLL 199 Query: 189 TADAVKQVEEMLA 201 V+ +E L+ Sbjct: 200 FRTIVESLELRLS 212 >UniRef50_B6HLY3 Pc21g08410 protein n=3 Tax=mitosporic Trichocomaceae RepID=B6HLY3_PENCW Length = 311 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 6/199 (3%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + Q + S ++H+ VV RQG+ + K R +V GS KK + QK Sbjct: 74 PDLEPQRLVHYSRRLLQMPTRHDILHRAVVYEGDSTRQGSASTKWRDDVHGSHKKLYAQK 133 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 G+GRAR+G SP+ R GGV F P+D S + +K+Y A + LS + + LIVV+ Sbjct: 134 GSGRARAGDKMSPVRRGGGVAFGPHPRDFSTDLPRKIYDQAWRIALSHRLSRGELIVVDN 193 Query: 124 -FSVEAPKTKLLAQ-KLKDMAL---EDVLIITGELDENLFLAARNLHK-VDVRDATGIDP 177 + + + ++ +T E +E A +D Sbjct: 194 TIDINEASSPFFIKNLIQAHGWYHKGRSTFVTLEPNEMFSDAVEKFGNHARTICVEDLDV 253 Query: 178 VSLIAFDKVVMTADAVKQV 196 +++ ++V+ +A+ ++ Sbjct: 254 KNVLERARLVIEKNALHKI 272 >UniRef50_B6KDX9 50S ribosomal protein L4, putative n=3 Tax=Toxoplasma gondii RepID=B6KDX9_TOXGO Length = 625 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 7/194 (3%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYA-AGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 + + FG ++++ Y A A R Q + E GS +K Q+ +GRA Sbjct: 211 GCVVLPNDIFGLPLRPDILYRCYWFYRRAIAGWTERMQLFKWEWPGSKRKLRTQQRSGRA 270 Query: 69 RSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEA 128 R G K+P G RP D K+NK++ LK +LS Q ++ VV+ F++++ Sbjct: 271 RIGWRKAPGKYVGVKAHPLRPHDQRIKINKRLLWQGLKIMLSAKFAQGQITVVDHFNLQS 330 Query: 129 PKTKLLAQKLKDM---ALEDVLIITG---ELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 KTK + L+ + L++ ++++N A ++ V + GI+ +L+ Sbjct: 331 HKTKHCVRHLRRLLGRKCPSALLVHEGTTDVNDNFRYATAHILAVRRENVEGINVYNLLK 390 Query: 183 FDKVVMTADAVKQV 196 + ++V+T A+ ++ Sbjct: 391 YRQLVITEKALLKL 404 >UniRef50_B1AIM1 50S ribosomal protein L4 n=15 Tax=Mycoplasmataceae RepID=RL4_UREP2 Length = 211 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 4/194 (2%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + L V+ F ++ + V+A A RQGT + T+ EV G GKKPWRQK Sbjct: 9 IDGNFAKELEVTSDLFVEVPHKQAMFDSVLAENAAERQGTHSTLTKGEVRGGGKKPWRQK 68 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLI-VV 121 TG+AR+GS ++P W GGV F +P ++++ KVN K+ A KS L+ + + +++ +V Sbjct: 69 HTGKARTGSTRNPHWTGGGVVFGPKPNRNYNLKVNAKVRLLAFKSALTIKLNEGKMLGLV 128 Query: 122 EKFSVEAPKTKLLAQKLKDMALE--DVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 +E P TK + + + LE VL++ + N+ + NL KV + + Sbjct: 129 ANSDLETPSTKKMVNFINNANLENQKVLLVIVDNFSNIKKSTNNLQKVTTKLWYQVSVRD 188 Query: 180 LIAFDKVVMTADAV 193 L+ + VV+ +A Sbjct: 189 LMHANVVVVAEEAF 202 >UniRef50_A8QA96 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8QA96_MALGO Length = 395 Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 66/248 (26%), Positives = 99/248 (39%), Gaps = 52/248 (20%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 K A + + +S F ++ +H VV Y R GT + K+R++V SGKK QKGT Sbjct: 85 KRAIAYVPMSSHVFNTAPHQHAMHMAVVYYLDALRSGTASTKSRSDVAYSGKKLRPQKGT 144 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 GRAR +P+ R GGV +P+D + +K+ AL+S LS R+ RL VV Sbjct: 145 GRARLSDAGNPMLRGGGVAHGPKPRDFKTDLPRKVRELALRSALSARFREGRLHVVPSLD 204 Query: 126 VEAP--KTKLLAQKLKDMALEDVLIITGELDE---------------------------- 155 AP T LA+ L + L +T D Sbjct: 205 WYAPPMSTNKLARLLSAKQWTNTLFLTAPRDPVSPVANERGSMRPSSVNLMYTDQQLTRH 264 Query: 156 -----NLFLAARNLHKVDVRD-----------------ATGIDPVSLIAFDKVVMTADAV 193 + LA RNL VD+ + ++ F ++V+ A+ Sbjct: 265 AQYIRHFALAQRNLPDVDLVRLHELPPHPRPRLEHAKQPGELHAYQVLEFQRIVLDMGAL 324 Query: 194 KQVEEMLA 201 + +EE L Sbjct: 325 EWLEEKLG 332 >UniRef50_Q6B8V4 50S ribosomal protein L4, chloroplastic n=1 Tax=Gracilaria tenuistipitata var. liui RepID=RK4_GRATL Length = 217 Score = 182 bits (462), Expect = 8e-45, Method: Composition-based stats. Identities = 64/179 (35%), Positives = 106/179 (59%), Gaps = 7/179 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 ++H+ ++ + R +TR EV+G G+KPW+QKGTGRAR+GS +SP+WR GGV F Sbjct: 39 ILHRALIHQLSNHRNRNAHTQTRGEVSGGGRKPWKQKGTGRARAGSNRSPLWRGGGVIFG 98 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF--SVEAPKTKLLAQKLKDMALE 144 R + + K+NKK + AL+ +++ + IV E F + P TK+L LK L+ Sbjct: 99 PRHKKYVNKINKKEKQLALRILINNKFKNT--IVTENFISKISTPNTKILVNNLKKYNLD 156 Query: 145 ---DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 ++LII E +L+L+ RNL V++ A ++ VSL+ + +++ DA+ + +M Sbjct: 157 TNNNILIIVNEKSNDLYLSTRNLKNVELLAANHLNIVSLLKANHIIINKDALDIINKMY 215 >UniRef50_A5IYY5 50S ribosomal protein L4 n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IYY5_MYCAP Length = 300 Score = 182 bits (462), Expect = 8e-45, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 4/189 (2%) Query: 14 VSETTFGR-DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGS 72 ++ F + +++ A RQGT K+RAEV G GKKPWRQKGTGRAR+GS Sbjct: 111 LNPKLFASDKIYSQAIFDTIISDRASRRQGTHDVKSRAEVRGGGKKPWRQKGTGRARAGS 170 Query: 73 IKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 +SPIW GG F P +++ KVNKK+ A S+L+ L+ Q + +VV+ F +E+ T Sbjct: 171 TRSPIWVGGGRAFGPTPVRNYKLKVNKKVRFNAFVSVLT-LLAQSKAVVVDDFKLESIST 229 Query: 132 KLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 K KL ++ ++ I+ DE + + NL V T + +LI D +V++ Sbjct: 230 KAAINKLSELGIKEQKHILIATNDEVTYKSVANLQNVICVKPTSVSVENLIWADVLVLST 289 Query: 191 DAVKQVEEM 199 + + E Sbjct: 290 EGYENFEGR 298 >UniRef50_Q8EUB4 50S ribosomal protein L4 n=1 Tax=Mycoplasma penetrans RepID=RL4_MYCPE Length = 213 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 57/198 (28%), Positives = 107/198 (54%), Gaps = 7/198 (3%) Query: 11 ALTV-SETTF--GRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 + + ++ F + N + V+ A +RQ T + T+AEV G G+KP++QK TGR Sbjct: 16 TVELKNKKLFISDKKINHQEIFNSVLVEEANSRQSTASTLTKAEVRGGGRKPYKQKHTGR 75 Query: 68 ARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRL-IVVEKFS 125 AR GSI++P + GG F P ++++ K N K Y+ A +S ++ + + L ++V K Sbjct: 76 ARQGSIRNPHYVGGGRAFGPSPEKNYTLKQNSKAYKLAFQSAMTLKLNEQGLNLLVNKID 135 Query: 126 VEAPKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF 183 ++ P TK +++ LK ++ + VL + + +EN + +N+ KV + + ++ Sbjct: 136 MKEPSTKTISKMLKKVSYENKKVLFVINDKNENFLKSCKNIQKVTSKMWNQVSVRDILNS 195 Query: 184 DKVVMTADAVKQVEEMLA 201 D V+ DA ++ E+ A Sbjct: 196 DIAVIQEDAFDKISEVFA 213 >UniRef50_A8Q8Q6 Ribosomal protein L4/L1 family protein n=1 Tax=Brugia malayi RepID=A8Q8Q6_BRUMA Length = 303 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 5/193 (2%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 +++ F L+H+ + Q ++ E+ G G KPW QK TGR +G Sbjct: 72 ISLHPDIFRTMPRIDLLHRNITWQENYRNLAITKQLSKKEMPGGGHKPWPQKKTGRHHAG 131 Query: 72 SIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF-SVEAP 129 SI+SP +R GG R P+ + + L ++ Q+ L++V+ F S+ Sbjct: 132 SIRSPHFRLGGFANGIRGPKTWFYVLPDAIRLEGLCIAVTIKHAQNDLVIVDNFASLPNA 191 Query: 130 KTKLLAQKLKDMALE-DVLIITG--ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 + + +L I E+ EN+ + +V GI+ SL+ D V Sbjct: 192 DAQFMHDLADSRNWGYSILFINDSSEVPENMAKVCDEIPTFNVMPVYGINCFSLVKHDTV 251 Query: 187 VMTADAVKQVEEM 199 + + A++ + Sbjct: 252 IFSLAALQLFQSR 264 >UniRef50_Q9TLT3 50S ribosomal protein L4, chloroplastic n=1 Tax=Cyanidium caldarium RepID=RK4_CYACA Length = 219 Score = 179 bits (456), Expect = 3e-44, Method: Composition-based stats. Identities = 61/177 (34%), Positives = 104/177 (58%), Gaps = 3/177 (1%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 +VH+V +R+ T + KT+++V G GKKPW+QKGTGRAR+GSI+SP+WR GGV F Sbjct: 40 VVHRVFSIQNKLSREHTASTKTKSQVRGGGKKPWKQKGTGRARAGSIRSPLWRGGGVVFG 99 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL--- 143 +P++ K+NKK R AL ++LS + + ++ + T+ L + L+ + + Sbjct: 100 PKPKNVFFKINKKEIRLALYTVLSNALPKTTVVSSLEGLPNFISTQALIKFLRSLNVSLD 159 Query: 144 EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 VLI+ + + LFL+ RN+ + + A ++ S+I +V+T A+K + + Sbjct: 160 NRVLIVVEKKETPLFLSCRNIKNLALIQADHLNVKSVILAQSLVVTLQALKIIYKTF 216 >UniRef50_B6K4T6 50S ribosomal protein L4 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K4T6_SCHJY Length = 245 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 14/212 (6%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + L + ++ + VV A R GT K+R+E+ SGKK Q Sbjct: 10 FPSLEPMGFLHIPRPFLTEPLRRDILQKAVVFEANRDRAGTANTKSRSEINCSGKKLRPQ 69 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KGTGRAR G SP+ R G V +P+D + K+ K++ A++ LSE RQ+ L+V++ Sbjct: 70 KGTGRARLGDASSPMLRGGAVAHGPKPRDFTTKMPTKIFSKAMRVALSERFRQNELLVLD 129 Query: 123 K-FSVEAPKTKLLAQK--LKDMAL--EDVLIITGEL--------DENLFLAARNL-HKVD 168 E +KLL L D+ L I +L ++ A +L + Sbjct: 130 SPLHTEQLTSKLLNAFVKLHDLGAPYGRTLFILDDLSYSTSAATNKRFIEATTSLGRHCE 189 Query: 169 VRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 A+ + + F K+ + A + ++ Sbjct: 190 FLPASQLQIRHALKFGKLAIEHKAFSTLYQLY 221 >UniRef50_D2R5T8 Ribosomal protein L4/L1e n=4 Tax=Planctomycetaceae RepID=D2R5T8_9PLAN Length = 209 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 111/194 (57%), Gaps = 2/194 (1%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 + ++ L+H VVV Y A RQGT K R EV GS KK +RQKGTG Sbjct: 13 EVGKYEIDPAEIAPKISQQLLHDVVVMYQANLRQGTHRTKGRGEVAGSTKKMYRQKGTGN 72 Query: 68 ARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 AR+GS +S + R GG FA RP+D+S ++ +K + A + ++ + Q+ ++V+++ S+ Sbjct: 73 ARAGSRRSGVRRGGGHIFALRPRDYSYRLPRKAVQAATRMAIAHKLNQNSVVVIDELSMA 132 Query: 128 APKTKLLAQKLKDMAL--EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 APKTK +A LK + L L+ T LD N++ +ARN+ KV V ++ +S++ K Sbjct: 133 APKTKEVATILKTLGLAGASTLVTTAGLDVNVYKSARNIDKVTVSPVADLNALSVLMPRK 192 Query: 186 VVMTADAVKQVEEM 199 +++T A+ ++ Sbjct: 193 MLVTKAALDAIKTR 206 >UniRef50_Q4UI83 Putative uncharacterized protein n=1 Tax=Theileria annulata RepID=Q4UI83_THEAN Length = 464 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 17/209 (8%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYA-AGARQGTRAQKTRAEVTGSGKKPWRQK 63 +K+A L V FG ++H+ Y A A Q + E GS KK +Q+ Sbjct: 103 VKEAIRYLRVPNDIFGLPIRPDILHRCYQFYRRAKAGYSEDMQLYKWEWPGSTKKWRKQQ 162 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKK------MYRGA----LKSILSELV 113 +G+AR G KSP G RP+D+ K+ ++ + A LK +LS Sbjct: 163 KSGKARIGWKKSPGKYVGVFAHPLRPKDNRTKIQRRSKLVFLIRFLALYTGLKIMLSAKF 222 Query: 114 RQDRLIVVEKFSVEAPKTKLLAQKLKDMALE---DVLII---TGELDENLFLAARNLHKV 167 Q ++ VV+ F + + KTK Q L+ + + L++ + +EN + N+ V Sbjct: 223 AQSQIQVVDSFLMASHKTKYAVQNLRRILGDRCNSALLVFEGLSDSNENFRWSTANIPSV 282 Query: 168 DVRDATGIDPVSLIAFDKVVMTADAVKQV 196 G++ +L+ + ++V+T A++++ Sbjct: 283 RRETVEGVNVYNLLKYRQLVITQSALRKL 311 >UniRef50_Q6KI54 50S ribosomal protein L4 n=1 Tax=Mycoplasma mobile RepID=RL4_MYCMO Length = 293 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 110/198 (55%), Gaps = 10/198 (5%) Query: 9 QSALTVSETTFG---RDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 ++ +++ + FG N + ++ A RQGT + KTR+EV+G GKKPW+QKGT Sbjct: 97 KNTVSLPKGIFGLSEEKINTQAIFDSILFERASQRQGTHSTKTRSEVSGGGKKPWKQKGT 156 Query: 66 GRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 GRAR+GS +SPIW GG+TF +P + + K+NKK+ A S L+ L+ I+VE Sbjct: 157 GRARAGSTRSPIWVGGGITFGPKPQKKYDFKINKKVRNLAFLSSLT-LLANKNAILVEDL 215 Query: 125 SVEAPKTKLLAQKLKDM---ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI 181 +E ++ L +KL+D+ L+ +LI++ DE +F + RN+ + V + L Sbjct: 216 KLEKISSQELIKKLEDLKINNLKKILIVSD--DEKIFKSGRNVQNLHVVKLNSLTVELLN 273 Query: 182 AFDKVVMTADAVKQVEEM 199 ++++ + +E Sbjct: 274 ETHALLLSKKDLTTLESR 291 >UniRef50_A5KRQ2 Ribosomal protein L4/L1e n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRQ2_9BACT Length = 199 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 101/193 (52%), Gaps = 6/193 (3%) Query: 13 TVSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 T+ +T F D N L+ AY A AR + K R EV G G+KP +QKGTGRAR+G Sbjct: 5 TLPKTVFAVDVPNHELLKLAYEAYLAEARTSAASTKKRGEVRGGGRKPHKQKGTGRARAG 64 Query: 72 SIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 SI+SP+WR GGVTF +++ +++N K R A++ L+ + ++I + K Sbjct: 65 SIRSPLWRGGGVTFGPSGNENYKKQLNVKAKRVAVRQALTLAAQAGKIITAD--VSATGK 122 Query: 131 TKLLAQKLK--DMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVM 188 TK + LK + L++ E L A NL +++ AT + ++ DK++M Sbjct: 123 TKDMTAFLKDQKADVRRTLLVVSEKSPELIRATGNLQNIELVRATYLSVFHVLNADKIIM 182 Query: 189 TADAVKQVEEMLA 201 T A+ +E L Sbjct: 183 TPTAITAIEAWLG 195 >UniRef50_O46895 50S ribosomal protein L4, chloroplastic n=1 Tax=Guillardia theta RepID=RK4_GUITH Length = 223 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 7/205 (3%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + L D +S +++ + L+H+V+ R G KTR+EV G GKKPW Sbjct: 18 VSLNKMDTKSHDSLNLNV--SKKSRYLLHRVLTNQLINNRSGNACTKTRSEVEGGGKKPW 75 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 +QKGTG AR+GS SP+W+ GGVTF +P+ S K NKK AL + L ++I Sbjct: 76 KQKGTGNARAGSSNSPLWKGGGVTFGPKPRTFSNKTNKKERLLALTTALYLKSNNTKVIN 135 Query: 121 VEKFSVEAPKTKLLAQKLKDM-----ALEDVLIITGELDENLFLAARNLHKVDVRDATGI 175 ++ KT+ L K ++ + +L + L+ +N+ VD+ TG+ Sbjct: 136 LDNLDFTNLKTRDLVIKCSNLIENYKKDQKILFVAEPTASGLWRYVKNISNVDLIYTTGL 195 Query: 176 DPVSLIAFDKVVMTADAVKQVEEML 200 D ++ ++ T A+ V+E+ Sbjct: 196 DLKKILQAHHIIFTCKALNDVKEVF 220 >UniRef50_Q4A5C2 50S ribosomal protein L4 n=1 Tax=Mycoplasma synoviae 53 RepID=RL4_MYCS5 Length = 229 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 64/181 (35%), Positives = 108/181 (59%), Gaps = 3/181 (1%) Query: 21 RDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRS 80 + ++ + +++ A RQGT K RA V+GSGKKPW+QKGTGRAR S +SPIW Sbjct: 45 EEVHQQAIFDSILSERASRRQGTHQVKNRAAVSGSGKKPWKQKGTGRARHSSRRSPIWVG 104 Query: 81 GGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLK 139 GG F + +++S KVNKK+ + A +S L+ LV D+ ++VE F ++ TK L+QKLK Sbjct: 105 GGRAFGPQSVKNYSLKVNKKVKQLAFRSALTMLV-NDKAVLVEDFKMDKISTKDLSQKLK 163 Query: 140 DMALEDV-LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 + ++ + +I + +F ++ NL V A ++ +L+ D +++ +++K + E Sbjct: 164 SLNVDKLRHVILVSENATVFKSSANLKNVTTLKAHSLNVETLVRADVLLVENESMKLLTE 223 Query: 199 M 199 Sbjct: 224 R 224 >UniRef50_Q7RXV7 60S ribosomal protein L4, mitochondrial n=5 Tax=Sordariomycetes RepID=Q7RXV7_NEUCR Length = 349 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 28/223 (12%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + +S + S ++H V+ R+G + KTR EV GS KK Q Sbjct: 96 FPELEPRSLESYSARHLHLPLRRDILHLAVIYEGDSTRRGMASTKTRYEVHGSHKKMSPQ 155 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KGTG AR G+ +SP+ + GG TF +P+D S K+NKK+Y A ++ LS ++ LIV E Sbjct: 156 KGTGNARRGTRQSPLMKGGGKTFGPKPRDFSTKLNKKVYDLAWRTALSYRYKRGELIVTE 215 Query: 123 K-FSVEAPKT--------------------KLLAQKLKDMALED----VLIITGELDENL 157 + P K + + + + ITG+ NL Sbjct: 216 DGLDLPLPNDFLWLAGGGKLSRELEDGYVRKWVHEFMTSLNWGKEAGRTTFITGDKRPNL 275 Query: 158 FLAARNLHKV--DVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 F L + +D L+ ++V+ A+K++ E Sbjct: 276 FTGFE-LAGAEGRALELWDVDVKDLLETGRIVIERSALKEMIE 317 >UniRef50_Q6ME62 Putative 50S ribosomal protein L4 n=3 Tax=Parachlamydiaceae RepID=Q6ME62_PARUW Length = 196 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 21/194 (10%) Query: 28 VHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAA 87 + +VA A ARQ + + KTRAEV + KK QKG GRAR GS +P +R GG F Sbjct: 2 IKDYIVALRANARQWSASTKTRAEVKHTTKKAHPQKGQGRARHGSTVAPQYRGGGRAFGP 61 Query: 88 RPQ-DHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE-D 145 RP+ D ++NKK + A++ +LSE ++++++ ++E +++APKTK LAQ L+ L Sbjct: 62 RPKFDQHVRINKKERKAAIRFLLSEKLKENKVWLIEDTAMDAPKTKTLAQFLRGFDLRGR 121 Query: 146 VLI-------------------ITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV 186 VL I+ + + + RNL + + A+ I+ ++ ++ Sbjct: 122 VLFLGETTFTDVETEGKVQRVSISTDKHNHFVKSMRNLPRANFMLASNINGYDVMIAREI 181 Query: 187 VMTADAVKQVEEML 200 V+T A+ ++ + L Sbjct: 182 VLTESALNELNQWL 195 >UniRef50_Q85FW2 50S ribosomal protein L4, chloroplastic n=1 Tax=Cyanidioschyzon merolae RepID=RK4_CYAME Length = 200 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 2/176 (1%) Query: 25 EALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVT 84 + L+H+ + + RQ KTRAE+ G G+KPW+QKGTGRAR+GS +SP+WR GGV Sbjct: 21 KHLLHRALRTHMLSIRQWGAHTKTRAEIRGGGRKPWKQKGTGRARAGSRRSPLWRGGGVA 80 Query: 85 FAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE 144 F R K+N+K R A K + ++ +V +E P ++ ++Q L + Sbjct: 81 FGPRGVAMECKLNRKESRKATKIAF--MACSKKIQIVNPPILEKPSSRTISQMLPPLPSR 138 Query: 145 DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 VL I E + +L+L+ RN+ + + A I L+ ++ ++ +A+ +E L Sbjct: 139 PVLWILHEKNPSLWLSCRNIKTLQLIQAEHIYVKPLLWAKQIWISHEAIPILENQL 194 >UniRef50_Q1CRU2 50S ribosomal protein L4 n=81 Tax=Epsilonproteobacteria RepID=RL4_HELPH Length = 215 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 11/202 (5%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + ++ + + G N ++ V Y + R T K RAEV+G G+KPW QKG Sbjct: 11 LKEKGSVELPKRYEG--INSHNLYLYVKHYLSSVRANTAKSKNRAEVSGGGRKPWAQKGG 68 Query: 66 GRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 GRAR+GSI SP++ GGV+ A ++++ K+NKK R AL+ L E + ++L VVEK Sbjct: 69 GRARAGSITSPVFVGGGVSHGATNKRNYNLKINKKQKRLALEYALEEKAQANKLFVVEKI 128 Query: 125 SV----EAPK----TKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGID 176 ++ E K TK Q + + D L + +DE LA NL K + D ++ Sbjct: 129 AIKGVVEDNKRKHLTKEANQMFQALEQRDTLFVCLNMDECTELAFSNLKKCLIIDVNELN 188 Query: 177 PVSLIAFDKVVMTADAVKQVEE 198 L AF VVM A + V + Sbjct: 189 AYLLAAFSSVVMEEAAFQHVVQ 210 >UniRef50_Q06RI4 23S ribosomal protein L4 n=1 Tax=Brucella ceti RepID=Q06RI4_9RHIZ Length = 176 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 31/201 (15%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 + + + ++E FG D + ++ +VV A +QG+ + Sbjct: 5 ITTLEGKDAGKVKLNEEIFGLDPRDDILQRVVRWQLARRQQGSHKAQG------------ 52 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 R GG ++H + KK+ L+ LS + LI+ Sbjct: 53 ------------------RGGGQAHGPVVRNHDHDLPKKVLALGLRHALSAKAKASDLII 94 Query: 121 VEKFSVEAPKTKLLAQKLKDMALEDVLIITG-ELDENLFLAARNLHKVDVRDATGIDPVS 179 ++ + KTK L + + LE+ L+I G E+D N AA N+ +DV GI+ Sbjct: 95 IDDLASADAKTKQLVSQFAKLGLENALLIGGAEIDANFQRAASNIPNIDVLPVQGINVYD 154 Query: 180 LIAFDKVVMTADAVKQVEEML 200 ++ K+V++ AV+ +EE Sbjct: 155 ILRRGKLVLSKAAVEALEERF 175 >UniRef50_Q075M8 Plastid 50S ribosomal protein L4 family (Fragment) n=1 Tax=Prototheca wickerhamii RepID=Q075M8_PROWI Length = 228 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 49/131 (37%), Positives = 71/131 (54%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + + T+ F ++H+VV A +QGT KTR EV G G+KP QKG Sbjct: 78 GRSVGSFTLGGDVFNTVVRPDILHRVVRWQLAARQQGTHKTKTRTEVRGGGRKPRPQKGG 137 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFS 125 G +R GSI++P WR GGV P+ H+ K+ K + R L+S LS R+ RL++V+ Sbjct: 138 GVSRQGSIRAPQWRGGGVAHGPVPRSHAIKLLKSIRRLGLRSALSAKAREGRLVIVDTLR 197 Query: 126 VEAPKTKLLAQ 136 + KT+ LA Sbjct: 198 LPEAKTRALAD 208 >UniRef50_Q8IB54 Mitochondrial ribosomal protein L4, putative n=10 Tax=Aconoidasida RepID=Q8IB54_PLAF7 Length = 568 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 7/199 (3%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAG-ARQGTRAQKTRAEVTGSGKKPWRQK 63 D ++V FG ++H+ Y A R Q + E GS KK QK Sbjct: 185 NDDNIKYISVPNDIFGLPIRSDILHKCYYFYRTALAGYTERMQLYKWEWPGSTKKYRSQK 244 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 +G+AR K+ G RP D +N+K +K +LS QD++ VV+ Sbjct: 245 KSGKARMNWRKTCGRYLGVKNHPIRPFDQKTNINRKFLWKGMKILLSAKFAQDQIKVVDN 304 Query: 124 FSVEAPKTKLLAQKLKDM---ALEDVLIITG---ELDENLFLAARNLHKVDVRDATGIDP 177 F +++ KTK + L+++ L++ ++++N A N+ V + G++ Sbjct: 305 FLIKSHKTKYTVKYLRNILGKNCNSALLVHEGKTDVNDNFLWACANIASVKRENVEGVNI 364 Query: 178 VSLIAFDKVVMTADAVKQV 196 +L+ + VV T A+K + Sbjct: 365 YNLLKYRYVVFTYKALKNI 383 >UniRef50_UPI000180C8CE PREDICTED: similar to mitochondrial ribosomal protein L4 n=1 Tax=Ciona intestinalis RepID=UPI000180C8CE Length = 330 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 8/197 (4%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 S + + F ++H VV +TRAE+ KKPW QKGTGRA Sbjct: 92 NSVVQLHPVLFDTHPRMDILHSVVRWQQEYREVDYSWSRTRAEIGRGKKKPWPQKGTGRA 151 Query: 69 RSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK--FS 125 R GS SP+W GG++ R P+ ++N L LS Q+ LI++E S Sbjct: 152 RHGSSNSPLWVKGGISQGPRGPRASFYELNPNTLLDGLLIALSIKHIQNDLIIIESAQIS 211 Query: 126 VEAPKTKLLAQKLKDMALEDVLIITGELDENLFL---AARNLHKVDVRDATGIDPVSLIA 182 + P + ++++ +L++ E +EN+ A + +++ G++ S++ Sbjct: 212 QDMPDFDEYLEN-RNLSEASMLLVHAE-NENISYLEHLAEDSKLLNIMPLYGLNVCSILK 269 Query: 183 FDKVVMTADAVKQVEEM 199 DK+V++ + ++E Sbjct: 270 HDKLVLSRCILDELEHK 286 >UniRef50_Q4FLL9 50S ribosomal protein L4 n=3 Tax=Candidatus Pelagibacter RepID=RL4_PELUB Length = 207 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 3/203 (1%) Query: 2 ELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWR 61 +L L + ++ V + F N+ LV V+ A + K + E+TGS K + Sbjct: 5 KLNLDGKKDSIEVLDKIFSAKINKRLVDNVLYKTNANYKGRHAKTKQQNEITGSTSKIYA 64 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAARPQ--DHSQKVNKKMYRGALKSILSELVRQDRLI 119 QKGTG AR S K+PI+ GGV + + +K+NK + ++ S+++E + + LI Sbjct: 65 QKGTGGARHASRKAPIFVGGGVAHGPKGELAYKKRKLNKSEKKLSIASLITEKNKLNNLI 124 Query: 120 VVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELD-ENLFLAARNLHKVDVRDATGIDPV 178 + F E KTK + +K + + LII + E + + RN+ V V D Sbjct: 125 IFSDFGNEIKKTKEMHSIIKKFEITNSLIILDKSSKEKIEKSVRNIPNVKVTDINHFSAF 184 Query: 179 SLIAFDKVVMTADAVKQVEEMLA 201 +I F KVV T ++K++E+ + Sbjct: 185 DIIKFKKVVFTESSIKELEKRYS 207 >UniRef50_Q6UCS1 Ribosomal protein L4 n=1 Tax=uncultured marine alpha proteobacterium HOT2C01 RepID=Q6UCS1_9PROT Length = 229 Score = 169 bits (430), Expect = 4e-41, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 108/200 (54%), Gaps = 1/200 (0%) Query: 1 MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPW 60 M + ++ + + F ++V +V + + K R+EV G+ +K Sbjct: 28 MHKIDGKKSGSVNLKDQLFNSKSGLSVVGSLVRWSESNQKPLRARTKNRSEVKGTTQKLG 87 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 RQKG+G AR GS K+ I+RSGG+ R +K+ K+ + ALK I ++ ++ + LI+ Sbjct: 88 RQKGSGGARHGSKKANIFRSGGMAHNLRGVRSLKKMPKRTRQEALKHIFADKLKNNNLII 147 Query: 121 VEKFSVEAPKTKLLAQKLKDMALEDVLIITGEL-DENLFLAARNLHKVDVRDATGIDPVS 179 VE+ +E PKTK+LA+ L D+ LI+ G+ D N LA+RNL + + + Sbjct: 148 VEELKIEEPKTKILAKSLSDLNAHSALILEGDKPDNNFVLASRNLKNIKYSSINNFNALD 207 Query: 180 LIAFDKVVMTADAVKQVEEM 199 L+ F+K++M+ +A++ +E Sbjct: 208 LLGFEKLIMSKNALEILESR 227 >UniRef50_A8Z669 50S ribosomal subunit protein L4 n=3 Tax=Candidatus Sulcia muelleri RepID=A8Z669_SULMW Length = 207 Score = 169 bits (430), Expect = 4e-41, Method: Composition-based stats. Identities = 61/185 (32%), Positives = 101/185 (54%), Gaps = 4/185 (2%) Query: 16 ETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKS 75 F + N ++ + Y + RQGT K R+E+TGS KK RQKG+G AR G IK+ Sbjct: 20 NNFFLKKENNNILFLDIKRYLSAQRQGTNKSKERSEITGSTKKIQRQKGSGNARKGDIKN 79 Query: 76 PIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLA 135 PI+RSGG F +P++ + K+N K A K+IL+ +R +++ V+E F KTKL+ Sbjct: 80 PIFRSGGRIFGPKPRNFNIKINNKSKFLAKKTILNFKLRTNKIKVIEDFKFNIIKTKLVF 139 Query: 136 QKLKDM----ALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTAD 191 + L + ++ LII ++++ F ++RNL + ++ L D +V Sbjct: 140 KILNRLNFNFNIKKSLIIYNKINDIFFFSSRNLKFTNFLSINELNSYELANSDYLVFFES 199 Query: 192 AVKQV 196 A+K++ Sbjct: 200 AIKKI 204 >UniRef50_D2IS95 Ribosomal protein L4 n=1 Tax=Cryptomonas paramecium RepID=D2IS95_9CRYP Length = 214 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 17/200 (8%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + + ++ VS+ F H+++ R T KTRAEV G G+KPW+Q Sbjct: 23 TITLNLKTCAEVSKFFF---------HRILTIQNKNQRCKTACSKTRAEVRGGGRKPWKQ 73 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVE 122 KGTGRAR+GS SP+W+ GGV F +P +++K+N K + A+ + L ++++V Sbjct: 74 KGTGRARAGSSVSPLWKGGGVVFGPKPTVYNKKINFKERQLAIFTGLY--ACSYKIVIVR 131 Query: 123 KF--SVEAPKTKLLAQKLK----DMALEDVLIITGELDENLFLAARNLHKVDVRDATGID 176 F S+ P+TK L + + +LI+ + E L+ + RN+ K+ + + Sbjct: 132 NFVSSIAQPRTKAFLGLLSSFDPSLLSKRILILVPKATETLYSSCRNVEKITIGSRKTLT 191 Query: 177 PVSLIAFDKVVMTADAVKQV 196 + D +++ +A+ + Sbjct: 192 LRDIFLADSILIAEEALPEF 211 >UniRef50_B2XTF4 50S ribosomal protein L4 n=2 Tax=Heterosigma akashiwo RepID=B2XTF4_HETA2 Length = 231 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 105/196 (53%), Gaps = 23/196 (11%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+H+ V +R G KTR+EV G G+KPW+QKGTGRAR+GS +SP+W+ GGVTF Sbjct: 36 LIHRAFVKQFIESRNGNANTKTRSEVRGGGRKPWQQKGTGRARAGSNRSPLWKGGGVTFG 95 Query: 87 ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSV-----------EAPKTKLLA 135 + + + K+NKK +R AL+++L ++ + V++ FS KTK L Sbjct: 96 PKTKTYKIKLNKKEWRLALQTLLFNK--KNSIRVIKSFSETFERISKEQGSNPQKTKTLL 153 Query: 136 QKL------KDMAL----EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK 185 L +++ +LI+ + NL ++NL +D+ A ++ SL+ Sbjct: 154 NFLNQFVKIRNLNSNNIRNKILIVVPKKSLNLISTSQNLKNIDIIAADNLNIKSLLDSKY 213 Query: 186 VVMTADAVKQVEEMLA 201 +++ +++K +EE Sbjct: 214 ILLCTESLKIIEETYG 229 >UniRef50_Q4EE76 Ribosomal protein L4/L1 family n=1 Tax=Listeria monocytogenes str. 4b H7858 RepID=Q4EE76_LISMO Length = 149 Score = 168 bits (427), Expect = 9e-41, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 86/131 (65%), Gaps = 1/131 (0%) Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKT 131 SI+SP WR GGV F P+ ++ K+ KK+ R A+KSILS V +++L+V+E + +APKT Sbjct: 19 SIRSPQWRGGGVVFGPTPRSYAYKLPKKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPKT 78 Query: 132 KLLAQKLKDMALE-DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTA 190 K A LK+++++ LI+ EN+ L+ARNL + V A I + + DK+++T Sbjct: 79 KEFAAFLKNISVDTKALIVVAGESENVELSARNLQGITVIPAESISVLEVAKHDKLIITK 138 Query: 191 DAVKQVEEMLA 201 AV++VEE+LA Sbjct: 139 AAVEKVEEVLA 149 >UniRef50_Q5KM69 Ribosomal protein L4, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KM69_CRYNE Length = 406 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 87/255 (34%), Gaps = 65/255 (25%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + F + ++H+ VV Y + R GT++ K+R+ V SG+K QKGTG+AR+G Sbjct: 126 IALPPDVFAQPIRRDILHRCVVWYLSQLRSGTKSTKSRSTVAYSGRKLIPQKGTGKARAG 185 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV---------- 121 S R G P++ +Q + +K+ ++ LS ++ L VV Sbjct: 186 DASSGTRRGGAPIHPIFPKNWAQALPRKVRELGMRVALSSKLKAGLLRVVPNLNEAGWKG 245 Query: 122 -----------------EKFSVEAPKTKL------------------------------- 133 E ++A KT Sbjct: 246 TNEAKRALADALTFPEVEDSEMQATKTNTEPVAQDAVQAVEKVNELEGTVPEATSSAIKP 305 Query: 134 -LAQKLKDMALEDVLIITGELDE-----NLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 + VL + + RN+ V+V + ++ + +V Sbjct: 306 GFIPRFGPAKDLSVLFLYSPFKPSDEIADFVRVTRNIPGVEVLSTEEVQVYDILKYRWLV 365 Query: 188 MTADAVKQV-EEMLA 201 M +AV +++ Sbjct: 366 MEGEAVDWFGDDVFG 380 >UniRef50_Q601L4 50S ribosomal protein L4 n=6 Tax=Mycoplasma RepID=RL4_MYCH2 Length = 214 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 111/190 (58%), Gaps = 4/190 (2%) Query: 13 TVSETTFGR-DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + ++ F + + + + +++ A R T K RAEV+G+GKKPW+QK TG+AR+G Sbjct: 25 DLPKSLFEQKEPHFQAIFDSILSERASKRLSTHKVKNRAEVSGTGKKPWKQKSTGKARAG 84 Query: 72 SIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 S +SPI+ GG F ++++ KVNKK+ + A S LS+ + Q++ I+V FS+ Sbjct: 85 SKRSPIFVGGGRAFGPTTQRNYNLKVNKKVKKLAFISALSQ-LAQNQQILVNDFSMNKIS 143 Query: 131 TKLLAQKLKDMALEDV-LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMT 189 TKLL +LK ++ + I+ D NLFL+ARNL V++ + SLI D ++++ Sbjct: 144 TKLLVDQLKIFKIDQLRHILIASSDPNLFLSARNLPNVELVKTNSLTVESLIKADLLIIS 203 Query: 190 ADAVKQVEEM 199 + + +E+ Sbjct: 204 KNEITNLEKR 213 >UniRef50_Q0INA7 Os12g0488600 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0INA7_ORYSJ Length = 346 Score = 162 bits (412), Expect = 5e-39, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 79/133 (59%), Gaps = 2/133 (1%) Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDR 117 KP++QKGTGRAR G+++ P +R G +P+ H+ K+ KK+ R LK LS + + Sbjct: 173 KPYKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAIKLQKKVRRLGLKIALSARTAEGK 232 Query: 118 LIVVEKFSVEAPKTKLLAQKLKDM-ALEDVLIIT-GELDENLFLAARNLHKVDVRDATGI 175 L+V E V + KTK + + M + VL++ G++D+ L LA +NLH V+V + G+ Sbjct: 233 LLVFEDLEVPSHKTKNVVSYISQMEDTKKVLLVDGGDIDKKLKLATQNLHYVNVLPSIGL 292 Query: 176 DPVSLIAFDKVVM 188 + S++ D + + Sbjct: 293 NVYSILQHDTLWL 305 >UniRef50_Q8GM59 50S ribosomal protein L4 n=3 Tax=Mycoplasma RepID=Q8GM59_MYCHO Length = 322 Score = 162 bits (412), Expect = 5e-39, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 111/193 (57%), Gaps = 8/193 (4%) Query: 10 SALTVSETTFGRD-FNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRA 68 S+ + ++ FG + + +++ R T KTR EV+GSGKKPW QK TG A Sbjct: 129 SSENLPKSVFGLEKIYNQAIFDAILSERGSRRLATHKTKTRGEVSGSGKKPWDQKHTGNA 188 Query: 69 RSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 R+GS++SPI+ GG F ++++ K+NKK R AL S L+ L + ++V+++S+ Sbjct: 189 RAGSLRSPIFVGGGKVFGPTTERNYNLKINKKTRRNALLSALTLLAKD-HAVLVKEYSLS 247 Query: 128 APKTKLLAQKLKD---MALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 T+ L KL + +L VL++ +E +FL+ARNL V V T + SL+A D Sbjct: 248 KISTRELLIKLNEDKIASLNKVLLV--SNNETVFLSARNLPNVTVTKVTSLSVESLLAAD 305 Query: 185 KVVMTADAVKQVE 197 +V+++D VK +E Sbjct: 306 VLVISSDDVKYLE 318 >UniRef50_B3E0I5 50S ribosomal protein L4 n=1 Tax=Methylacidiphilum infernorum V4 RepID=RL4_METI4 Length = 222 Score = 159 bits (404), Expect = 4e-38, Method: Composition-based stats. Identities = 65/177 (36%), Positives = 100/177 (56%), Gaps = 1/177 (0%) Query: 24 NEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGV 83 + ++H +V Y A +R GTRA KT+A V SGKKPWRQKGTGRAR+G + SP+W GGV Sbjct: 29 RDQVLHDALVGYLANSRSGTRATKTKATVKASGKKPWRQKGTGRARAGYVSSPVWVGGGV 88 Query: 84 TFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDM-A 142 F +P+D S+ + KK+ AL + VR + + +EK + KTK + L+ Sbjct: 89 VFGPQPRDFSKNIPKKIKGLALLKAFAAKVRSEEVYCLEKVEMTEIKTKKMLSLLEGWDG 148 Query: 143 LEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 E L+I N+ L+ RN+ + + A ++ + L+ F KV + A++ + E Sbjct: 149 KESGLLILKNPSRNVLLSGRNIPHLGIVRAQDVNALDLLGFKKVFLERPAIEVLVER 205 >UniRef50_B4CUX4 Ribosomal protein L4/L1e n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUX4_9BACT Length = 203 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 70/177 (39%), Positives = 110/177 (62%), Gaps = 1/177 (0%) Query: 26 ALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTF 85 ++H V A A R GT + KT+A V GSG KPWRQKGTGRAR+G SP+W GGV F Sbjct: 26 QVIHDTVTALRANRRSGTASVKTKATVNGSGAKPWRQKGTGRARAGYKSSPVWVGGGVVF 85 Query: 86 AARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE- 144 P+D+S+KV K + + AL+ LSE ++ + +V++F+++ PKTK A + + E Sbjct: 86 GPHPRDYSKKVAKSVKKLALRKALSERIKSGDVFIVDEFAIKEPKTKQFAAAIALITEEP 145 Query: 145 DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 L+++ D+N +L+ARN+ + A+ ++ L+ F K+V+T D + Q+ + LA Sbjct: 146 KTLVVSAAFDKNTYLSARNVQPAQLITASEVNTEQLLNFRKIVITNDGLAQIADRLA 202 >UniRef50_C5KH52 Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KH52_9ALVE Length = 497 Score = 158 bits (401), Expect = 8e-38, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 91/199 (45%), Gaps = 11/199 (5%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYA---AGARQGTRAQKTRAEVTGSGKKPWRQK 63 + ++ V + F + +++ + AG +Q Q + E GS KK K Sbjct: 117 EEIGSIIVPNSIFAEPIRKDILYFTYWWHRGCMAGYQQD--MQLFKWEWPGSNKKARSHK 174 Query: 64 GTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEK 123 G++R G K+P G + RP++ Q K+ +LK +LS Q + VV+ Sbjct: 175 NIGKSRMGRRKAPGKYDGVFSIPQRPREWRQGELKRRVWKSLKMMLSAKFAQGEITVVDS 234 Query: 124 FSVEAPKTKLLAQKLKDMALE---DVLII---TGELDENLFLAARNLHKVDVRDATGIDP 177 F+V KT+ +A L+ + L+I T ++++N ++ +V D G+ Sbjct: 235 FNVSTHKTRHVAAHLRRLLGRHCNSALLIHVGTSDVNDNFRWGTAHIAQVRREDVEGVST 294 Query: 178 VSLIAFDKVVMTADAVKQV 196 +L+ + ++V+T A+ ++ Sbjct: 295 YNLLKYRQIVITEQALHKL 313 >UniRef50_A0CQM2 Chromosome undetermined scaffold_24, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0CQM2_PARTE Length = 318 Score = 158 bits (401), Expect = 8e-38, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 3/193 (1%) Query: 11 ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARS 70 ++ + + F + LV ++V ++ T+A + SG K QK TGRAR Sbjct: 49 SIALDQEIFNQPIRRDLVQRLVRYTDLYDKKVTKATLALRDAAASGAKNHPQKKTGRARQ 108 Query: 71 GSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPK 130 G + P G + + + +K+ A K L+ + + + V++ + K Sbjct: 109 GHRQRPGRNKGIKAHGRKIRSLRIDLPRKVRLQAYKVGLTAALIEGKFTVIDTEKLNEGK 168 Query: 131 TKLLAQKLKDMAL--EDVLIITG-ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVV 187 TK L Q +K + +LI+T + D+ A+RNL ++ + + ++ F ++ Sbjct: 169 TKHLVQLMKGFESFTQPLLIVTSVDPDDLFLRASRNLENLETCTVKEFNIIKILKFKSIL 228 Query: 188 MTADAVKQVEEML 200 +T +A+ Q+ E L Sbjct: 229 ITKEAIIQLTESL 241 >UniRef50_Q6BKF7 DEHA2F22330p n=4 Tax=Saccharomycetales RepID=Q6BKF7_DEBHA Length = 255 Score = 158 bits (401), Expect = 9e-38, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 18/216 (8%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + S + + F + VV A AR G+ T+ + S +K Q Sbjct: 37 FPSLEPHSFVPLPTQFFDAPLRRDFLWSAVVYEADRARVGSGYVITKGDKLYSNRKLHPQ 96 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLI-- 119 KGTGRAR+G SPI + + P D S ++ K+Y A ++ LS+ R ++ Sbjct: 97 KGTGRARTGDANSPIRDNEVKAHGVKAPHDWSTRLPSKVYSKAFQTALSDQYRNGKVFII 156 Query: 120 ------------VVEKFSVEAPK-TKLLAQKLKDMALEDVLIITGELDENLFLAARNL-H 165 VV F + P+ T+ + D+ +L IT +NL + + Sbjct: 157 GGDKSATKASDDVVADFKYDHPEATRQFVEA-HDLDRLSLLFITDAQRDNLINSTEYVGK 215 Query: 166 KVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 K DV ++ ++ +++ + A A++ + Sbjct: 216 KADVLIKEAVEVRDILKANRIYIEAPALQWFIGKYS 251 >UniRef50_A8J5Z5 Mitochondrial ribosomal protein L4 (Fragment) n=4 Tax=cellular organisms RepID=A8J5Z5_CHLRE Length = 124 Score = 155 bits (393), Expect = 7e-37, Method: Composition-based stats. Identities = 44/119 (36%), Positives = 66/119 (55%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGT 65 + + F ++H+VV + A +QGT K+RAEV+G GKKPW QK T Sbjct: 6 ERPLGLAPLPGAAFNVPVRIDILHRVVRYWRAKWQQGTHKAKSRAEVSGGGKKPWNQKKT 65 Query: 66 GRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKF 124 GRAR GSI+SP+W+ GGV+ A RP+ H+ + + ++ LS + + R VV+ Sbjct: 66 GRARQGSIRSPLWKGGGVSHAPRPRSHAHALPRSTRLLGMRCALSAKINEGRFFVVDDL 124 >UniRef50_B7FXM9 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FXM9_PHATR Length = 184 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 21/178 (11%) Query: 44 RAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDH-SQKVNKKMY 101 KT +EV+GSG+K QKGTG AR+G + P +R G + D+ + K+NKK+ Sbjct: 4 AKTKTISEVSGSGRKIRNQKGTGMARAGHSRPPHFRGGAKAHGPKNVTDYGNTKLNKKVR 63 Query: 102 RGALKSILSELVRQDRLIVVEKF-SVEAPKTKLLAQKLKDMALED-----VLIITGELDE 155 + AL LS+ + + LI++ + + KTK L + L+ + LI+ + E Sbjct: 64 KLALVHALSQKLLEGNLIILNSLKELPSHKTKELTRFLEPWDIGGKDGATALILDAYISE 123 Query: 156 -------------NLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 NL++A+ N++++ V + ++ +K+V+T A++++E+ L Sbjct: 124 EEGQPQSYKGVPMNLWVASSNIYRIKVGNHLAACVYDILKHEKLVLTLAALEKLEDRL 181 >UniRef50_P51998 54S ribosomal protein YmL6, mitochondrial n=12 Tax=Saccharomycetaceae RepID=RL4P_YEAST Length = 286 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 87/224 (38%), Gaps = 30/224 (13%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + + + V +T ++ + VV R G R+E S +K Q Sbjct: 49 FPSLEPLTFVPVPTSTVAAPLRRDILWRAVVYENDNRRVGASNPPGRSENGFSRRKLMPQ 108 Query: 63 KGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVV 121 KG+GRAR G SP +GG A P D++ ++ K+Y A + LS + +L V+ Sbjct: 109 KGSGRARVGDANSPTRHNGGRALARTAPNDYTTELPSKVYSMAFNNALSHQYKSGKLFVI 168 Query: 122 --EKFSVEAPKTKLLAQKLK--------------------------DMALEDVLIITGEL 153 EK + +P +L +L + + +L IT + Sbjct: 169 GGEKVDLISPTPELDLNRLDLVNTNTVEGKEIFEGEVIFRKFLEEFQLKGKRLLFITDKT 228 Query: 154 DENLFLAARNLH-KVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 E L ++ KVDV ++ ++ V + +A++ + Sbjct: 229 REGLIKSSDPYKQKVDVIQKELVEVNDILRAQAVFIELEALEYL 272 >UniRef50_B9WJJ8 60S ribosomal (Large subunit) protein, mitochondrial, putative n=4 Tax=Saccharomycetales RepID=B9WJJ8_CANDC Length = 272 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 85/223 (38%), Gaps = 29/223 (13%) Query: 2 ELVLKDAQSALTVSETTFGR--DFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKP 59 E + ++ + + F ++ V A AR G+ +++ S +K Sbjct: 45 EFPSLEPKTFIPLPTNFFNTEKPIRRDILWSCVTYEADKARVGSNYVILKSDSPYSNRKL 104 Query: 60 WRQKGTGRARSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRL 118 QKG+GRAR G SP + A + P D S + K+Y +++ + +Q L Sbjct: 105 RPQKGSGRARLGDANSPHMDNEIKAHAIKGPHDWSTDLPSKIYSRGIQNAFTMHYKQGNL 164 Query: 119 IVVEK-FSVE---APKTKLLAQKLKDMALEDVLIITGELDENLFLAARN----------- 163 +VE + + T+ + ++ ++L IT E +NL + + Sbjct: 165 NIVENELNFQYGYDIITQSFVS-IHNLNKLNLLFITNEPRDNLMESIKQFYINDKEFNSL 223 Query: 164 --------LHKV--DVRDATGIDPVSLIAFDKVVMTADAVKQV 196 L K+ V ++ ++ +V + + A++ Sbjct: 224 NKKEKPKYLQKLKGKVLTKEDVEVRDILRAHRVFIESSALQWF 266 >UniRef50_C4PXU3 50S ribosomal protein L4, putative n=1 Tax=Schistosoma mansoni RepID=C4PXU3_SCHMA Length = 409 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 91/251 (36%), Gaps = 63/251 (25%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVT-GSGKKPWRQKGTGRA 68 + + F LVH+ + A R TRAE++ G+ KKPW QKGTG+A Sbjct: 101 GMIDLHPDIFAVFPRIDLVHKNLYWQAHYRLIDWRCITTRAELSYGTRKKPWPQKGTGKA 160 Query: 69 RSGSIKSPIWRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVE 127 R G+ ++ IW +GG R P+ ++ L S+LS Q +VVEK + Sbjct: 161 RHGNRRTHIWLTGGQCKGPRGPESFYYLLSYGERLAGLLSMLSIKHAQVIFVVVEKNNEL 220 Query: 128 APKTKLLAQKLKDMALE--DVLIITGELD-------------------ENLFLAARNLH- 165 + + ++L D+ +L + +N+ + NL Sbjct: 221 SA---IYIRQLADLRCWGPSILFVDAHSPASQLAVPCPGSENIDNNETDNMNFSYDNLAI 277 Query: 166 ------------------------------------KVDVRDATGIDPVSLIAFDKVVMT 189 + + ++ S++ D +V++ Sbjct: 278 SLACGSYENHVKSEISPESSAFKLDSIAPRATHPGRGLTLMPVHSLNVWSMVHHDTLVIS 337 Query: 190 ADAVKQVEEML 200 A++ +EE L Sbjct: 338 LKALEMLEERL 348 >UniRef50_C4R1R6 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4R1R6_PICPG Length = 261 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 85/220 (38%), Gaps = 21/220 (9%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQ 62 + + L +S L+ + VV R G R E S +K Q Sbjct: 41 FPSLEPHTVLPISTEFLNSPLRRDLLWKAVVMEFDNIRVGASNPPGRGEHKFSRRKLRPQ 100 Query: 63 KGTGRARSGSIKSPIWRSGGVTFA-ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVV 121 KG+GRAR G SP +G A P D S + K+Y A + LS + L ++ Sbjct: 101 KGSGRARVGDANSPTRHNGARALARNAPNDFSTDLPFKVYARAYRIALSSFYIKGHLHII 160 Query: 122 ------------EKFSVEAPKTK----LLAQKLKDMALEDVLIITGELDE--NLFLAAR- 162 ++ +E K + Q + ++ ++L I+ L+ NL A + Sbjct: 161 GGCSSLIPFNRGDQNILELSTDKKEALEIFQAIHNLKGLNILFISDSLNNSQNLNKAIQA 220 Query: 163 -NLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 N ++ + D ++ L+ ++V + +++ + A Sbjct: 221 LNDDQISLLDKENVEVRHLLKANRVFIDQASLQFFAKEFA 260 >UniRef50_Q8KTP1 Ribosomal protein L4 n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTP1_TREPR Length = 198 Score = 136 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 6/173 (3%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+ QV+ AY A R Q++R EV+ S +KPWRQKG GRAR+G SP+WR GG F Sbjct: 22 LLRQVLNAYHASLRPSCSTQRSRGEVSHSTRKPWRQKGLGRARAGMTSSPLWRGGGRAFP 81 Query: 87 ARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED 145 +R ++NK+M R +L + RQ RL +V+ + KT+ L Sbjct: 82 SRTAASRLVRINKRMARLSLHVQIVRAARQGRLAIVDALRIAPSKTRELRCASAQ---PS 138 Query: 146 VLIITG--ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 +++ G EL N + AARN+ + + GI P + ++VMT A + + Sbjct: 139 TMVVVGKSELCYNAYRAARNVSGLSIVAQRGISPRAFHLSSRIVMTRKAAEDI 191 >UniRef50_Q6C573 YALI0E20493p n=1 Tax=Yarrowia lipolytica RepID=Q6C573_YARLI Length = 271 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 12/210 (5%) Query: 2 ELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWR 61 + + V+ G ++ L+ + VV A R G R ++ S +K + Sbjct: 49 QFPSLEPTRLQPVTSQMLGAQVHKDLLWRAVVYEADRQRVGASNPPGREQMGYSTRKLHK 108 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFA-ARPQDHSQKVNKKMYRGALKSILSELVRQDRLIV 120 QKG G+AR G SP GG P + + K++Y A+++ L+ ++ RL V Sbjct: 109 QKGMGKARVGDAGSPTRTQGGFALDRNAPNKMATGLPKQVYASAIRAALTSQYQEGRLFV 168 Query: 121 VEKF-----SVEAPKT---KLLAQKLKDMALEDVLIITGELDENL--FLAARNLHKVDVR 170 V+ SV+ T + L +L E + + L L NL D+ Sbjct: 169 VDGPCELPESVKDNTTFGQQWLQGELGFGKKEMTVFLVDTERPILDSVLGKDNLK-ADIV 227 Query: 171 DATGIDPVSLIAFDKVVMTADAVKQVEEML 200 I+ ++ VV+ D +K + Sbjct: 228 PKEFIEVRDILKARNVVVEYDVLKWLAAKY 257 >UniRef50_D2RE65 Ribosomal protein L4/L1e n=2 Tax=Archaea RepID=D2RE65_ARCPR Length = 252 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 85/253 (33%), Gaps = 63/253 (24%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGT-----RAQKTRAEVTGSG-- 56 + + + + F +F ++ + V+A + RQ E G G Sbjct: 8 LKGEIVEEIELP-KVFETEFRPDIIKRAVLAIQSHRRQPYGTNPLAGVDYAWENWGPGYG 66 Query: 57 --KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELV 113 + P + G+ RA P G + + ++K+NKK R AL S ++ Sbjct: 67 YARVPRWKIGS-RAVV----VPQAVGGRRAHPPKVQKKWAEKINKKEKRKALMSAIAATA 121 Query: 114 RQDRL-------------IVVEKFSVEAPKTKLLAQKLKDMAL----------------- 143 + + IVV+ KTK +A+ K + + Sbjct: 122 NPELVKARNHVFEGELPKIVVDDIE-SIKKTKEVAEIFKAIGVYADVERAKETKRVRAGK 180 Query: 144 -----------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL----IAFDKVVM 188 VL++ G D+ + AA+NL VD ++ L +A V Sbjct: 181 GKMRGRRYVMKRSVLLVVG-KDDGVIKAAKNLPGVDAVLVKDLNVELLAPGCVAGRLTVW 239 Query: 189 TADAVKQVEEMLA 201 T A++ + L Sbjct: 240 TKSAIEYLRGWLC 252 >UniRef50_Q8I431 60S ribosomal protein L4, putative n=7 Tax=Eukaryota RepID=Q8I431_PLAF7 Length = 411 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 81/256 (31%), Gaps = 60/256 (23%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQK-----TRAEVTGSGK 57 K+ + + F L+ V + R + T AE G+G+ Sbjct: 13 TNGKNVVGEVEIP-VVFQTPIRNDLIQSVYTNMSKNRRHPYAVKLGAGYETSAESWGTGR 71 Query: 58 ---KPWRQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSE- 111 + R G G R+G GG F + +KVN K R A+ S ++ Sbjct: 72 AVARIPRVPGGGTHRAGQGAFGNMCRGGGMFNPTKIWRRWGRKVNLKEKRYAVCSSIAAS 131 Query: 112 --------------LVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALED------------ 145 +++ L+V KTK L + L+D Sbjct: 132 GVTSLVLARGHRISHLKEVPLVVSNDIE-SLSKTKEAVNFLVSLGLKDEVNRLVKSKKIR 190 Query: 146 ----------------VLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV--- 186 LII E D + A RN+ VD+ T ++ + L + Sbjct: 191 AGKGKMRNRKYKIRNGPLIIY-ENDNGVKKAFRNIPGVDLCKVTKLNLLKLAPGGSIGRL 249 Query: 187 -VMTADAVKQVEEMLA 201 + + A K+++ + Sbjct: 250 CIWSESAFKKLDVIYG 265 >UniRef50_P36578 60S ribosomal protein L4 n=76 Tax=Eukaryota RepID=RL4_HUMAN Length = 427 Score = 126 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 83/247 (33%), Gaps = 56/247 (22%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR-----AQKTRAEVTGSGK---KPWR 61 +T+ F +V+ V RQ +T AE G+G+ + R Sbjct: 20 KNVTLP-AVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 78 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKS----------IL 109 +G G RSG GG FA + ++VN R A+ S ++ Sbjct: 79 VRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVM 138 Query: 110 SELVRQDRL----IVVEKFSVEAPKTKLLAQKLKDMALEDVL------------------ 147 S+ R + + +VVE KTK LK + + + Sbjct: 139 SKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 198 Query: 148 ---------IITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV----VMTADAVK 194 I D + A RN+ + + + + ++ + L V + T A + Sbjct: 199 RRRIQRRGPCIIYNEDNGIIKAFRNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFR 258 Query: 195 QVEEMLA 201 +++E+ Sbjct: 259 KLDELYG 265 >UniRef50_Q4UES5 60S ribosomal subunit protein L4/L1, putative n=2 Tax=Theileria RepID=Q4UES5_THEAN Length = 426 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 77/234 (32%), Gaps = 49/234 (20%) Query: 13 TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQK-----TRAEVTGSGK---KPWRQKG 64 T+ F LVH V + RQ + T A G+G+ + R KG Sbjct: 21 TIMPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKG 80 Query: 65 TGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKS----------ILSEL 112 G RSG + G FA + +K+N K R AL ++S Sbjct: 81 GGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRG 140 Query: 113 VRQDRL----IVVEKFSVEAPKTKLLAQKLKDMALED---------------------VL 147 R + + +V++ KT+ + L M L D L Sbjct: 141 HRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKRKGKKRPVGPL 200 Query: 148 IITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMTADAVKQVE 197 ++ A RN+ VDV ++ + L V+ + A + ++ Sbjct: 201 VVMRSTAVEGKRAFRNIPGVDVMSVEHMNLLKLAPAGTLGRLVIFSKSAFELLD 254 >UniRef50_A0B9W9 50S ribosomal protein L4P n=8 Tax=Euryarchaeota RepID=RL4_METTP Length = 251 Score = 123 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 84/248 (33%), Gaps = 55/248 (22%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR-------AQKTRAEVTGSG 56 + + + + F ++ L+ + V+A A Q R+ G G Sbjct: 8 ISGNPVGEIVLP-AIFDEEYRPDLIKRAVLAAQANRLQPYGPHFYAGMNTSARSWGPGHG 66 Query: 57 KKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQ 115 + TGR R+ P+ R G + P + S+K+N+K A++S ++ + Sbjct: 67 VSRVPRIVTGR-RA--AAVPMARGGRASHPPVPSKVLSEKINEKERIKAIRSAVAATAKP 123 Query: 116 DRL------------IVVEKFSVEAPKTKLLAQKLKDMALE------------------- 144 D + IVV KT L + L L Sbjct: 124 DIVAARGHLFSGELPIVVRGEIESISKTSELRRFLMAAGLWDDVMRAKNGRKVRAGKGKI 183 Query: 145 --------DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI---AFDKV-VMTADA 192 ++I D + AARNL VD A ++ L ++ V + + Sbjct: 184 RGRRFRQPRSILIVAAADNGIGRAARNLPGVDFVTADRLNAELLAPGTHAGRLTVWSEPS 243 Query: 193 VKQVEEML 200 +K +EE L Sbjct: 244 LKVLEERL 251 >UniRef50_UPI0001509E5C ribosomal protein L4/L1 family protein n=1 Tax=Tetrahymena thermophila RepID=UPI0001509E5C Length = 410 Score = 122 bits (307), Expect = 6e-27, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 74/257 (28%), Gaps = 61/257 (23%) Query: 5 LKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ---------GTRAQKTRAEVTGS 55 K + LT+ F +VH+V +Q GT AE G+ Sbjct: 16 NKQTATKLTLP-AVFTAPIRTDIVHKVFTDLNKNRKQASGVKISTRGTAGMGHSAESWGT 74 Query: 56 GK---KPWRQKGTGRARSGSIKSPIWRSGGVTFAA--RPQDHSQKVNKKMYR-------- 102 G+ + R G+G RSG G FA + ++VN R Sbjct: 75 GRAVARIPRVGGSGTHRSGQAAFGNQCRKGRMFAPLKTYRRVHRRVNVNQKRHAVAAALA 134 Query: 103 ------GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL------------- 143 Q+ V + KTK LK + Sbjct: 135 ASALVPLVFARGHRISNVQELPYVFDDSVESYEKTKQAVAFLKRVGAYDDVLRVAETKAL 194 Query: 144 ---------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV-- 186 L++ G L A RN+ VDV + ++ + L V Sbjct: 195 RAGQGKLRNRRYKLRRGPLVVYGNEKSTLTRALRNIPGVDVCNVNRLNLLQLAPGGHVGR 254 Query: 187 --VMTADAVKQVEEMLA 201 + T A K++ E+ Sbjct: 255 FIIWTESAFKKLNEIFG 271 >UniRef50_P09180 60S ribosomal protein L4 n=185 Tax=Eukaryota RepID=RL4_DROME Length = 401 Score = 122 bits (306), Expect = 9e-27, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 78/242 (32%), Gaps = 57/242 (23%) Query: 16 ETTFGRDFNEALVHQVVVAYAAGARQGTR-----AQKTRAEVTGSGK---KPWRQKGTGR 67 F +V++V RQ +T AE G+G+ + R +G G Sbjct: 28 PAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGT 87 Query: 68 ARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSE----LVRQDRLIVV 121 RSG GG FA + +KVN R AL S ++ + Q + V+ Sbjct: 88 HRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVI 147 Query: 122 E----------KFSVEAPKTKLLAQKLKDMALE--------------------------- 144 + + KTK L+ + + Sbjct: 148 DGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIAR 207 Query: 145 -DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMTADAVKQVEEM 199 L++ DE L A RN+ ++ + ++ + L V+ T A ++ ++ Sbjct: 208 RGPLVVYD-KDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDL 266 Query: 200 LA 201 Sbjct: 267 FG 268 >UniRef50_Q8TY91 50S ribosomal protein L4P n=2 Tax=Archaea RepID=RL4_METKA Length = 260 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 94/266 (35%), Gaps = 72/266 (27%) Query: 1 MELVLKDAQSA----LTVSETTFGRDFNEALVHQVVVAYAAGARQGT-----RAQKTRAE 51 ME + + + + + + F + L+ + V+A A RQ +T AE Sbjct: 1 MEAPVFNLEGEEVDTVELP-SFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAE 59 Query: 52 VTGSGK--------KPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYR 102 G+G K R GRA + G A P +D +Q+VN+K R Sbjct: 60 SWGAGHGVAMVPRVKGRRHPAAGRA----ARVAQAVGGQKAHAPTPEKDWTQRVNRKERR 115 Query: 103 GALKSILSELVRQD---------------RLIVVEKFSVEAPKTKLLAQKLKDMALE--- 144 AL+S L+ + + ++VV++ K + + + K + L Sbjct: 116 AALRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELK-SLNKAREVREFFKSVGLWADV 174 Query: 145 -------------------------DVLIITGELDENLFLAARNLHKVDVRDATGIDPVS 179 VLI+ E DE + L ARN VDV +A + Sbjct: 175 ERAKSNRRIRAGKGKRRGRRYVKPKSVLIVVDE-DEGIKLGARNHPGVDVVEAMHLGVEH 233 Query: 180 L----IAFDKVVMTADAVKQVEEMLA 201 L V T A++ +EE L Sbjct: 234 LAPGAHPGRLTVFTPGALEVLEERLG 259 >UniRef50_D1LYL0 Ribosomal protein L4 n=9 Tax=Fungi/Metazoa group RepID=D1LYL0_MANSE Length = 439 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 86/248 (34%), Gaps = 58/248 (23%) Query: 10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGT-----RAQKTRAEVTGSGK---KPWR 61 + + F LV+ V V+ + ARQ +T AE G+G+ + R Sbjct: 23 KTIPLP-FVFKAPIRPDLVNDVHVSMSKNARQPYCVSKEAGHQTSAESWGTGRAVARIPR 81 Query: 62 QKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRG------------ALKS 107 +G G RSG GG FA + ++VN + R AL Sbjct: 82 VRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAAVAAALAASGVPALVQ 141 Query: 108 I---LSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMA-LEDVL---------------- 147 + E + + L+V +K E KTK L+ + DVL Sbjct: 142 ARGHIIEKIPELPLVVSDKVQ-EITKTKQAVIFLRRVKAWSDVLKVYKSQRLRAGKGKMR 200 Query: 148 ----------IITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV----VMTADAV 193 +I D+ L A RN+ V++ + ++ + L + + T A Sbjct: 201 NRRRVQRKGPLIIYHKDKGLSRAFRNIPGVEMLNVNKLNLLKLAPGGHLGRFIIWTQSAF 260 Query: 194 KQVEEMLA 201 +++ + Sbjct: 261 DRLDALFG 268 >UniRef50_A7AUF0 Ribosomal protein RPL4A n=1 Tax=Babesia bovis RepID=A7AUF0_BABBO Length = 360 Score = 117 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 77/236 (32%), Gaps = 50/236 (21%) Query: 13 TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQK-----TRAEVTGSGK---KPWRQKG 64 T+ F LV V + RQ K T A G+G+ + R KG Sbjct: 21 TLMPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKG 80 Query: 65 TGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRG----------ALKSILSEL 112 G R+G + G +A + +KVN K R + ++S Sbjct: 81 GGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRG 140 Query: 113 VRQDRL----IVVEKFSVEAPKTKLLAQKLKDMALE----------------------DV 146 R + L +VV+ + KTK + L+ + L Sbjct: 141 HRIEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGRKKRPVGP 200 Query: 147 LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV----VMTADAVKQVEE 198 LII A RN+ V+V ++ + L + V + A + +++ Sbjct: 201 LIILRATAVEGKRAFRNIPGVEVACVERLNLLKLAPAGALGRLCVWSKSAFEALDD 256 >UniRef50_Q2NFV7 50S ribosomal protein L4P n=23 Tax=Euryarchaeota RepID=RL4_METST Length = 259 Score = 116 bits (292), Expect = 4e-25, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 88/252 (34%), Gaps = 61/252 (24%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGT-----RAQKTRAEVTGSGKK 58 + D + + E F ++ ++ + V++ Q ++T AE GSG+ Sbjct: 9 LKGDITEEIELPE-IFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRG 67 Query: 59 ---PWRQKGTGRARSGSIKSPIWRSGGVTFAARPQD-HSQKVNKKMYRGALKSILSELVR 114 R KG+ +A P G R + +K+NKK A++S ++ Sbjct: 68 AAMVPRVKGSSKA----AFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRSAIAATAN 123 Query: 115 QDRL--------------IVVEKFSVEAPKTKLLAQKLKDMAL----------------- 143 ++ + V++ TK + KD+ + Sbjct: 124 KELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGK 183 Query: 144 -----------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI---AFDKV-VM 188 + L++ G D + L ARN VDV + I+ L ++ + Sbjct: 184 GKLRGRKYRTPKGPLVVVGN-DRGISLGARNHAGVDVVEVNNINAELLAPGTHAGRLTIY 242 Query: 189 TADAVKQVEEML 200 T A++++ ++ Sbjct: 243 TKSAIEKLGDLF 254 >UniRef50_C6UN10 Putative 50S ribosomal subunit protein L4 n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN10_HODCD Length = 187 Score = 116 bits (291), Expect = 4e-25, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 70/181 (38%), Gaps = 15/181 (8%) Query: 20 GRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWR 79 G + +V Y R KTRA+V+ S +K ++QKGTG AR + +R Sbjct: 12 GFEPRLDVVSAAWRWYTNKRRWHVAQIKTRADVSCSRRKLFKQKGTGGARHSTRAVCQFR 71 Query: 80 SGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLK 139 GG F AR + K+NK++ AL+S L+ + L VE + + L Sbjct: 72 GGGK-FCARRTLLTPKLNKRVKTLALRSALALKLAAGELKFVEGLAAAKLTP---SSFLV 127 Query: 140 DMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 ++ V + + SL+A V++T A + + Sbjct: 128 HACPRSAAVVGLRA-----------AGVANAHWSKLCARSLLATSAVIVTKRAFLALAQK 176 Query: 200 L 200 L Sbjct: 177 L 177 >UniRef50_A3FPV6 60S ribosomal protein-like, putative n=23 Tax=Eukaryota RepID=A3FPV6_CRYPV Length = 394 Score = 115 bits (289), Expect = 8e-25, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 76/253 (30%), Gaps = 60/253 (23%) Query: 7 DAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGT-----RAQKTRAEVTGSGK---K 58 A S++ + T F LV V + RQ + AE G+G+ + Sbjct: 18 KATSSIPLP-TVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVAR 76 Query: 59 PWRQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRG------------A 104 R +G +RSG GG F+ + +K+N R + Sbjct: 77 IPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPS 136 Query: 105 LKSILSELVRQ--DRLIVVEKFSVEAPKTKLLAQKLKDMALE------------------ 144 L + + +V+ KT + K+ Sbjct: 137 LVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGK 196 Query: 145 ------------DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVM 188 L++ E + + A RN+ VD ++ + L + Sbjct: 197 GKMRNRRRVCAVGPLVVYAEDN-GIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTIF 255 Query: 189 TADAVKQVEEMLA 201 T A+K+++E+ Sbjct: 256 TKGAIKRLQEIYG 268 >UniRef50_P60847 50S ribosomal protein L4P n=1 Tax=Nanoarchaeum equitans RepID=RL4_NANEQ Length = 268 Score = 114 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 90/265 (33%), Gaps = 67/265 (25%) Query: 1 MELVLKDA----QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQ----KTRAEV 52 ME+ L + + + F ++ + +A + RQ A K + Sbjct: 1 MEVPLYNLQASQVGNIELPPQ-FNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAW 59 Query: 53 TGSGKKPWRQK-GTG-----RA---RSGS------IKSPIWRSGGVTFAARP-QDHSQKV 96 T ++ WR G G RA R G+ G + +D +K+ Sbjct: 60 TSKRRRSWRTSYGRGISRVSRAILRRHGALFYWVARNIAQAVKGKKAHPPKAEKDWYEKI 119 Query: 97 NKKMYRGALKSILSE-----------LVRQDRLIVVEKFSVEAPKTKLLAQKLKD----- 140 NKK R A++S L+ + + +V + KTK + Q L Sbjct: 120 NKKERRLAIRSALAATKELDLVKARGHIIDKPVPIVVDGLEQLRKTKEIQQLLLKLGLEK 179 Query: 141 ----------------------MALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPV 178 + + LI+ + +E LF A N+ +D+ + ++ Sbjct: 180 ELERVYEIKRRAGKGKRRGRAYIERKGPLIVVNDYNEQLFKAVDNIPGLDIEEVPNLNVE 239 Query: 179 SLIAFDK----VVMTADAVKQVEEM 199 L K ++++ DA++ + E Sbjct: 240 LLAPGAKPGRLLIISKDALETLRER 264 >UniRef50_Q673S8 Ribosomal protein L4 n=7 Tax=environmental samples RepID=Q673S8_9EURY Length = 304 Score = 114 bits (286), Expect = 2e-24, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 88/268 (32%), Gaps = 75/268 (27%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGT----RAQKTRAEVTGSGKK 58 V A+T+ + F + E L+ + V+A A RQ K + + Sbjct: 39 TVEAKNGKAVTLPD-VFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSV 97 Query: 59 PWRQKGTGRAR----SGSI---KSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILS 110 W KG G +R +G ++P R G + +D SQK+N K R A S ++ Sbjct: 98 EWWGKGRGVSRIMRKAGQRTAAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSAIA 157 Query: 111 ELVRQDRL--------------IVVEKFSVE---------------APKTKLLAQKLKDM 141 + + I+++ + T+ ++ + Sbjct: 158 ASASSNLVSERGHHFEASLRFPIIIDGYVESREGGDEKYDLESLPLQYSTRKFVAMMEGL 217 Query: 142 AL----------------------------EDVLIITGELDENLFLAARNLHKVDVRDAT 173 L + +L++ + + L AARN+ VD+ A Sbjct: 218 GLGADLDRARTGRTIRAGKGTMRGRKYRTPKSILLVVSQTN-GLAKAARNIPGVDIVVAK 276 Query: 174 GIDPVSLIA---FDKV-VMTADAVKQVE 197 + L ++ V T A+ +E Sbjct: 277 DLSAEDLAPGGDAGRLTVWTKAAIGALE 304 >UniRef50_B0ETG0 60S ribosomal protein L4, putative n=6 Tax=Entamoeba RepID=B0ETG0_ENTDI Length = 431 Score = 113 bits (283), Expect = 4e-24, Method: Composition-based stats. Identities = 42/243 (17%), Positives = 74/243 (30%), Gaps = 57/243 (23%) Query: 16 ETTFGRDFNEALVHQVVVAYAAGARQG-----TRAQKTRAEVTGSGK---KPWRQKGTGR 67 F +VH V + RQ ++ A G+G+ + R G+G Sbjct: 25 PAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTEAGKQHSAISWGTGRAVARIPRISGSGS 84 Query: 68 ARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSELVRQDRL------- 118 R+G G F+ + +K K+M R A+ S ++ + Sbjct: 85 GRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHI 144 Query: 119 -------IVVEKFSVEAP-KTKLLAQKLKDMAL--------------------------- 143 +VV S+ KTK LK + Sbjct: 145 AGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKIKE 204 Query: 144 -EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA----FDKVVMTADAVKQVEE 198 + L++ G D A RN+ VD + ++L ++ T A K++ Sbjct: 205 RKGPLVVYGNDDLQAVKAFRNIPGVDTCRVENLSVLNLAPGCHMGRFIIWTESAFKKLNT 264 Query: 199 MLA 201 + Sbjct: 265 IFG 267 >UniRef50_B0R657 50S ribosomal protein L4P n=8 Tax=Halobacteriaceae RepID=RL4_HALS3 Length = 250 Score = 112 bits (281), Expect = 7e-24, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 80/257 (31%), Gaps = 65/257 (25%) Query: 1 MELVL----KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ-----GTRAQKTRAE 51 M++ + D L + F LV + V+A A Q +T AE Sbjct: 1 MQVTVRDLDGDDAGTLDLP-RVFEEPVRPDLVKRAVLAAQANRTQEYGADEYAGLRTTAE 59 Query: 52 VTGSGKKP-WRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYR-----GA 104 GSG+ K G G + P G + +DH VN K + Sbjct: 60 SQGSGRGMAHVPKANG---QG-ARVPQTVGGRKAHPPKAEKDHGLDVNDKERKAAVRAAV 115 Query: 105 LKSILSELVRQD----------RLIVVEKFSVEAPKTKLLAQKLKDMALE---------- 144 + SELV L+V + F + KT+ + L+ + + Sbjct: 116 AATTDSELVADRGHNFDDDVEFPLVVSDDFE-DLVKTQDVVSLLEALGVHADIERADEGR 174 Query: 145 ------------------DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI----A 182 +L +T AARNL VDV ++ L Sbjct: 175 TVRAGQGTLRGRKYQEPTSILFVTASES-GPSTAARNLAGVDVATGREVNAEDLAPGAEP 233 Query: 183 FDKVVMTADAVKQVEEM 199 V T AV++V + Sbjct: 234 GRLTVWTESAVEEVAQR 250 >UniRef50_Q8SRC2 60S RIBOSOMAL PROTEIN L4 n=12 Tax=Apansporoblastina RepID=Q8SRC2_ENCCU Length = 335 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 89/249 (35%), Gaps = 59/249 (23%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKT-----RAEVTGSGK---KPW 60 + L + E F + LV + Y RQ K AE G+G+ + Sbjct: 16 KKTLDLPE-VFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVP 74 Query: 61 RQKGTGRARSGSIKSPIW-RSGGVTFAARP-QDHSQKV--NKKM----------YRGALK 106 R KG G R+G + R G + + + ++KV N K + +L Sbjct: 75 RVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLV 134 Query: 107 SILSELVRQDRL--IVVEKFSVEAPKTKLLAQKLKDMAL--------------------- 143 + ++ I+V +A KTK + L+++ + Sbjct: 135 EARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMR 194 Query: 144 -------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL----IAFDKVVMTADA 192 + +LI+ GE E L RN+ VD +D + L +A ++ T A Sbjct: 195 NRRYTQRKGILIVHGESSEML--GFRNIRGVDQMSIDSLDLLELAPGGVAGRLIIWTESA 252 Query: 193 VKQVEEMLA 201 ++++++ Sbjct: 253 FEKLDKIFG 261 >UniRef50_Q1KYM6 RPL4 (Fragment) n=1 Tax=Streblomastix strix RepID=Q1KYM6_9EUKA Length = 492 Score = 109 bits (273), Expect = 6e-23, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 81/252 (32%), Gaps = 57/252 (22%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQG-----TRAQKTRAEVTGSGK--- 57 A+ V +VH V + A RQ + AE G+G+ Sbjct: 15 GKARDTTAVPSVIRYSPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVA 74 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSELVRQ 115 + R G+G +R+G GG ++ + + VN R A+ S ++ Sbjct: 75 RVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNP 134 Query: 116 DRL--------------IVVEKFSVEAPKTKLLAQKLKDMAL------------------ 143 + +VV + KTK + L + Sbjct: 135 SLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSG 194 Query: 144 ----------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV----VMT 189 VLI+ + +E L A RN+ VD+ + ++ L + + T Sbjct: 195 KARNRRYTQRRGVLIVHDQ-NEGLANAFRNISGVDISNVXRLNIRDLAPGGHLGRFIIWT 253 Query: 190 ADAVKQVEEMLA 201 A K+++++ Sbjct: 254 EGAYKKLDKLYG 265 >UniRef50_Q4DUP9 Putative uncharacterized protein n=6 Tax=Trypanosomatidae RepID=Q4DUP9_TRYCR Length = 459 Score = 109 bits (272), Expect = 8e-23, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 80/251 (31%), Gaps = 59/251 (23%) Query: 3 LVLKDAQSAL----TVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAE---VTGS 55 + + + + + + FG + + + + R A K E + Sbjct: 115 VPVFNLNNEVTHTRELDPFVFGMYPETEELSKNLTYWL--VRCQNYASKWDYETREIWRK 172 Query: 56 GKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNK---KMYRGALKSILSEL 112 KK W G G R + K+ + GG T ++P + + K + + + +L+ Sbjct: 173 AKKNWPNTGMGMPRVSNRKNHQYLWGGRTKPSKP--WNMLMPTMDVKTWSKSNRMMLTLK 230 Query: 113 VRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL----------------------------- 143 + Q RL VVE+ ++ P + + M+ Sbjct: 231 MLQGRLQVVERLTLSEPTQECYLGLCRTMSWDVRHTGGGVLFMDGGSRITPSIEFDRSFF 290 Query: 144 ------------EDVLIITGELDENLFLAARNLHKV----DVRDATGIDPVSLIAFDKVV 187 L+ + D N + + + + + + +++V Sbjct: 291 FGSFFNGRNKVVRPTLLCDEQYDYNKTASKQRMKGPKGPKNPIPINRFNVFDAMQHERLV 350 Query: 188 MTADAVKQVEE 198 +T A+ Q+EE Sbjct: 351 ITEGAIMQLEE 361 >UniRef50_UPI0001923E1E PREDICTED: hypothetical protein n=2 Tax=Hydra magnipapillata RepID=UPI0001923E1E Length = 426 Score = 109 bits (272), Expect = 8e-23, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 2/123 (1%) Query: 79 RSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKL 138 GGV+ +P+D+S ++ K+ R L++ LS Q L VVE ++ + + Sbjct: 246 YKGGVSGGPKPKDYSYELPFKVRRMGLRTALSCKFAQGDLTVVEDYNN--LTETNFSDAV 303 Query: 139 KDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198 ++L+ L + G ++ L K+D + A + ++ K+V++ AV+ +EE Sbjct: 304 TSLSLQSSLFVDGFENDYLDSLVSGFEKIDFKPALLLHVYGMLIRSKLVLSLQAVRILEE 363 Query: 199 MLA 201 L Sbjct: 364 KLC 366 >UniRef50_B5IFI8 Ribosomal protein L4/L1 family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFI8_9EURY Length = 254 Score = 107 bits (267), Expect = 3e-22, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 76/252 (30%), Gaps = 61/252 (24%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ-----GTRAQKTRAEVTGSGK 57 + + + +T+ F + L+ + V + Q T + AE G G Sbjct: 7 TIGGEVKRQITLP-KVFNYPYRPDLIKEAVRIFQLNRVQPHGVSPTAGMRRVAESWGPGH 65 Query: 58 KPWRQKGTGRARSGSIKS----PIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSEL 112 + R G P G + +K+N KM R A S LS Sbjct: 66 GISKM----VPRVGHTSRGAIIPSTVGGRAGHPPTTQKVWKRKMNIKMRRLAKYSALSMT 121 Query: 113 VRQDRL--------------IVVEKFSVEAPKTKLLAQKLKDMAL--------------- 143 + + +VVE K + L+++ + Sbjct: 122 SNKVMVAKRGHKFSPDITLPVVVEDEFENISTVKEAIRVLQNLGIYEDIIRASEKRIRGG 181 Query: 144 ------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI---AFDKV-V 187 + VLI+ D N+ RNL VD+ ++ L ++ + Sbjct: 182 KGKRRGRRYKKKKSVLIVVSNKD-NVLKGFRNLPGVDIVTPRELNAEVLAPGTHAGRLAI 240 Query: 188 MTADAVKQVEEM 199 T A+K++ Sbjct: 241 FTESAIKEIRRW 252 >UniRef50_Q9HIR0 50S ribosomal protein L4P n=3 Tax=Thermoplasmatales RepID=RL4_THEAC Length = 255 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 80/250 (32%), Gaps = 60/250 (24%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 V + + + + E F + E ++ + A + RQ + A + G Sbjct: 10 VSGEMKGEIDLPE-VFDTEVREDIIRRAFRAISLSMRQPYGSSP-LAGMRRVGHTTRP-- 65 Query: 64 GTGRARS-----GSIKSPI--WRSGGVTFAAR-PQDHSQKVNKKMYRGALKSILSELVRQ 115 G G +R GS I G + R ++ K+N + + A S ++ Sbjct: 66 GLGISRMPRIAGGSRVVGIASAVGGKSAHSPRTTKNLYVKINDRERKMAKYSAIALTASV 125 Query: 116 DRL--------------IVVEKFSVEAPKTKLLAQKLKDMAL------------------ 143 + + IVVE KTK LK++ + Sbjct: 126 EAVKKRGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRG 185 Query: 144 ----------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMT 189 + VLI+ + + A R+L VD+ + L + T Sbjct: 186 KMRGRRYKQPKSVLIV--ARNSSAMKAFRSLPGVDIASPNSLSIRKLAPGGVGGRLTIFT 243 Query: 190 ADAVKQVEEM 199 A++ ++E+ Sbjct: 244 EGAIESLKEV 253 >UniRef50_B5JYE1 Ribosomal protein L4/L1 family (Fragment) n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JYE1_9GAMM Length = 101 Score = 106 bits (265), Expect = 5e-22, Method: Composition-based stats. Identities = 61/100 (61%), Positives = 78/100 (78%) Query: 101 YRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA 160 YRGA+ SI SELVRQ+RL+VVE +V+APKTK L KLK+M LE VL+++ D NL+LA Sbjct: 1 YRGAMASIFSELVRQERLVVVEDITVDAPKTKQLVGKLKEMELESVLLVSETDDINLYLA 60 Query: 161 ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 ARNL+ VDV D G+ PV LI FDKV++T D++K+VEE L Sbjct: 61 ARNLNSVDVTDVAGLSPVDLIRFDKVLITVDSLKRVEEQL 100 >UniRef50_A8TE32 Ribosomal protein L4/L1e n=1 Tax=Methanococcus voltae A3 RepID=A8TE32_METVO Length = 253 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 82/247 (33%), Gaps = 60/247 (24%) Query: 8 AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGR 67 + + + + F ++ L+ + V++ Q + A S K KG GR Sbjct: 12 EKGEVAIP-SVFSAEYRPDLIKRAVISSLTAKLQPKGSNL-LAGHRTSAKSIG--KGHGR 67 Query: 68 ARS------GSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQD---- 116 AR G P G + + +++N+K AL+S ++ + Sbjct: 68 ARVRRTAQGGGAFVPQAVGGRRAHGPKVEKILLERINRKERLKALQSAIAASANVEIVKA 127 Query: 117 -----------RLIVVEKFSVEAPKTKLLAQKLKDMAL---------------------- 143 LIV E+F KTK K + L Sbjct: 128 RGHIIPDVPALPLIVSEEFE-SIVKTKDALDVFKALKLDADLTRAKEGISIKAGKGKLRG 186 Query: 144 ------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA---FDKV-VMTADAV 193 VL++ + + + A++N+ VDV A + + + ++ + T A+ Sbjct: 187 RKYKKPRSVLVVVSKACDAV-KASKNIAGVDVITADDLGTMHIAPGTAAGRLTLWTEGAI 245 Query: 194 KQVEEML 200 + + E Sbjct: 246 EALREKF 252 >UniRef50_A6VHD3 50S ribosomal protein L4P n=18 Tax=Archaea RepID=RL4_METM7 Length = 252 Score = 102 bits (256), Expect = 5e-21, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 83/257 (32%), Gaps = 62/257 (24%) Query: 1 MELVLKD----AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSG 56 M + + + + + + F ++ L+ + V++ Q S Sbjct: 1 MNVKVYNLDGSEKGDIELP-AVFETEYRPDLIKRAVISSLTAKLQPKGCDAFAG-YRTSA 58 Query: 57 KKPWRQKGTGRAR-----SGSIKS-PIWRSGGVTFAARP-QDHSQKVNKKMYRGA----- 104 K KG G+AR G+ P G + + +++N+K A Sbjct: 59 KSIG--KGHGKARVRRTAQGAGAFVPQAVGGRRAHPPKVEKILFERINRKEKLKALASAI 116 Query: 105 -------LKSILSELVR--QDRLIVVEKFSVEAPKTKLLAQKLKDMAL------------ 143 + S + +VV KTK + + K + L Sbjct: 117 AASAIPEIVSARGHKIEGVPSLPLVVNADFESLAKTKEVLEVFKTLKLDADLARAKDGIK 176 Query: 144 ----------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSL----IAF 183 + VL++ G+ E + A+RNL VDV A + + + +A Sbjct: 177 IKAGRAKLRGRKYKKPKSVLVVVGDACEAIA-ASRNLAGVDVITANDLSAIHIAPGTMAG 235 Query: 184 DKVVMTADAVKQVEEML 200 + T +A++++ Sbjct: 236 RLTLWTENAIEKINGRF 252 >UniRef50_A9BL16 Rpl1 n=1 Tax=Cryptophyta RepID=A9BL16_9CRYP Length = 312 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 75/247 (30%), Gaps = 59/247 (23%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR-----AQKTRAEVTGSGK---KPW 60 ++ + E F + V + + RQ T A G+G+ + Sbjct: 17 VDSVNLPE-IFLSPIRIDIFKFVFLNMSKNKRQSYSVNQSSGMNTSAISWGTGRAVARIP 75 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGA------------LK 106 R KG+G RSG + GG F+ + K+ K R A L Sbjct: 76 RVKGSGTNRSGQGAVGNFCRGGRMFSPTTIWRKWHHKIIKNQRRQAVLTSVACSGLVSLV 135 Query: 107 SILSELVRQ--DRLIVVEKFSVEAPKTKLLAQKLKDMAL---------EDVL-------- 147 + + + +V+E TK LK++ + L Sbjct: 136 MARGHKISETPEIPLVIESCVESIICTKFGQTALKNLGAYSDIRDKLKKKTLKAGKGKLR 195 Query: 148 ----------IITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV----VMTADAV 193 +I E + A RN+ ++ ++ L V + T + Sbjct: 196 NRRRKKYLGPLIIFEKN---ARAFRNIPGIETCCIDYLNIQKLAPGGHVGRFCIWTYKSF 252 Query: 194 KQVEEML 200 +++++ Sbjct: 253 SKLDQIY 259 >UniRef50_Q9YFM1 50S ribosomal protein L4P n=7 Tax=Thermoprotei RepID=RL4_AERPE Length = 272 Score = 100 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 83/257 (32%), Gaps = 64/257 (24%) Query: 3 LVLKDAQS----ALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKK 58 + + D + ++ + F + L+ + ++ Q K R + G Sbjct: 16 VPVYDERGGEKDSVVLP-QIFRFPVRKDLIRRAFLSEFTARLQP----KGRDPMAGKRTS 70 Query: 59 PWRQK-GTGRARS----GSIKSPI---WRSGGVTFAARPQDHSQK-VNKKMYRGALKSIL 109 G G AR GS+++ + R G R + ++ +NKK R A S + Sbjct: 71 AVSLGVGRGVARVPRIKGSLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATISAI 130 Query: 110 SELVRQDRL-------------IVVEKFSVEAPKT-KLLAQKLKDMAL------------ 143 S R+D + IV++ + T + L+ + + Sbjct: 131 SATSREDLVRQRGHRFSAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKR 190 Query: 144 ----------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK-- 185 + VL + + L LA + + VDV T + + L Sbjct: 191 YNAGKGKMRGRRYKVPKSVLFVLEDPRSPLALAVKGMPGVDVVTPTLLSVLHLAPGGHPG 250 Query: 186 --VVMTADAVKQVEEML 200 + T +A+K + Sbjct: 251 RLTIYTTEALKLLSRRF 267 >UniRef50_C3N5S8 50S ribosomal protein L4P n=10 Tax=Sulfolobaceae RepID=RL4_SULIA Length = 267 Score = 100 bits (250), Expect = 3e-20, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 85/251 (33%), Gaps = 60/251 (23%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ-----GTRAQKTRAEVTG---SGK 57 + + + F + ++ +V +A + Q ++T AE G Sbjct: 17 GNKVKEVELP-FIFSFPVRKDIIRRVFLAEFTHSLQPKGRDPMAGKRTSAESFGINLGMA 75 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELV--- 113 + R K +G A +P G +TF + ++VN K + A+ S LS Sbjct: 76 RVPRVKNSGEA----ALAPNTVGGRLTFPPSVDKKLVEEVNDKEKQLAVISALSATADTV 131 Query: 114 ---RQDRL--------IVVEKFSVEAPKTKLLAQKLKDMALED----------------- 145 + + IVV V + + L+ + + D Sbjct: 132 FVKARGHVFKDSVSFPIVVTDDIVSLKTASEVEEFLEKIGVYDDVKRVKERIRIRAGKGK 191 Query: 146 -----------VLIITGELDENLFLAARNLHKVDVRDATGIDPVSL----IAFDKVVMTA 190 LII + + + AARN+ VDV +A + + L + T Sbjct: 192 MRGRKYKEPIGPLIIVHDSNSPIVKAARNIAGVDVVNAKDVSVIHLAPGAHPGRLTIYTE 251 Query: 191 DAVKQVEEMLA 201 ++K ++E L+ Sbjct: 252 TSIKILDERLS 262 >UniRef50_C8N6G3 50S ribosomal protein L4 n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6G3_9GAMM Length = 103 Score = 98.7 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 1/103 (0%) Query: 100 MYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMA-LEDVLIITGELDENLF 158 MYR AL+SI SEL RQDRL +VE+ + + KTK +M +D L+IT L+ENLF Sbjct: 1 MYRAALRSIFSELQRQDRLCLVEELNFSSNKTKDFVSYAAEMGFGQDFLLITESLNENLF 60 Query: 159 LAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 LA+RN+ V V D IDPV L+ +KV + A++++ E L+ Sbjct: 61 LASRNIPSVVVVDVEAIDPVLLLRHEKVAIDKLAIERINEWLS 103 >UniRef50_Q9MTE6 Ribosomal protein L4 n=1 Tax=Toxoplasma gondii RepID=Q9MTE6_TOXGO Length = 211 Score = 95.6 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Query: 44 RAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRG 103 K +A + S KK +QKG+G+AR GS KS + + G V F + + + KK Sbjct: 61 SNTKNKAFSSYSNKKLRQQKGSGKARIGSKKSVLQKGGSVAFGLNLKRYFNPLIKKTLFL 120 Query: 104 ALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQK---LKDMALEDVLIITGELDENLF-L 159 LK + +I + F+ + K + L + + +L + + ++ Sbjct: 121 ILKYLCLNKRTNIYIININTFNKYSVNFKDYLKLQVQLNGILIHKLLCLNLTKNNLVYFK 180 Query: 160 AARNLHKVDVRDATGIDPVSLIAFDKVVM 188 + +++ + + + L++F + + Sbjct: 181 FTKQGKQINFLKSNKLTCLKLLSFKYIFI 209 >UniRef50_UPI0001BCDE73 50S ribosomal protein L4 n=1 Tax=Campylobacter fetus subsp. venerealis str. Azul-94 RepID=UPI0001BCDE73 Length = 119 Score = 93.3 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 1/112 (0%) Query: 86 AARP-QDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALE 144 + + + QK NKK R AL+ L++ +L V+ + + KTK + + Sbjct: 4 GPKNNRHYDQKANKKQKRLALEFALNDKGANGKLYAVDNIQISSGKTKDAISISNKLGVR 63 Query: 145 DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQV 196 D LII ELD LA +NL V DA+ ++ + + V+ A++ + Sbjct: 64 DALIIKNELDAKTLLAIKNLANCYVIDASEVNAYLVSVYSAVIAEKAALQSI 115 >UniRef50_UPI000038E236 50S ribosomal protein L4P n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E236 Length = 256 Score = 92.9 bits (230), Expect = 5e-18, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 76/251 (30%), Gaps = 58/251 (23%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQK 63 + + + + F + E L+H+ A + RQ + A G Sbjct: 8 IEGEVTKEIELP-QVFEIETREDLIHKAFRAISLSMRQPYGSSP-LAGTRRVGHNLGPNH 65 Query: 64 GTGR-ARSGSIKSPI----WRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDR 117 G R R S + G + R + +K+NKK R A S ++ ++R Sbjct: 66 GISRIPRLASGSRGVLLASMVGGRSALSPRSDKVLYKKINKKERRLAKLSAIAFTANKER 125 Query: 118 L------------------IVVEKFSVEAPKTKLLAQKLKDMAL---------------- 143 + +VVE K K Q L ++ + Sbjct: 126 ILQRGHRISEESIEKLTFPVVVEDDIESITKVKDAVQVLSNLGVYDDVLRSKDGKKIRAG 185 Query: 144 -----------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVM 188 L+I G E+L A +L VD+ + L + Sbjct: 186 RGKMRNRTYKQPKSLLIVGSSVESL-RAFASLPGVDLASLNSLSITKLAPGGNPGRLTIY 244 Query: 189 TADAVKQVEEM 199 TA ++ + E+ Sbjct: 245 TASTIENLREV 255 >UniRef50_Q4U6T4 SL3 n=1 Tax=Brugia malayi RepID=Q4U6T4_BRUMA Length = 306 Score = 92.1 bits (228), Expect = 9e-18, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 10/108 (9%) Query: 16 ETTFGRDFNEALVHQVVVAYAAGARQGTR-----AQKTRAEVTGSGK---KPWRQKGTGR 67 F +V V RQ +T AE G+G+ + R +G G Sbjct: 142 PGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGTGRAVARIPRVRGGGT 201 Query: 68 ARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSILSELV 113 RSG GG FA + ++VN R A+ S + + Sbjct: 202 HRSGQGAFGNMCRGGRMFAPTKVFRRWHRRVNVAQKRYAMVSARTSRL 249 >UniRef50_D2MKV5 Ribosomal protein L4/L1e n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKV5_9BACT Length = 98 Score = 91.0 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Query: 105 LKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL-EDVLIITGELDENLFLAARN 163 ++S LS + L+V+ S+ PKTKL+A+ +K + VL + G + +F A RN Sbjct: 1 MQSALSSKMAAGELLVLADLSLPEPKTKLMAKAVKQLGATGPVLFVVGRDHDAVFRATRN 60 Query: 164 LHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA 201 L +V + ++ + +V+ D + V+E+ A Sbjct: 61 LAQVKAVPPEELTVYDVLRYQTLVVLKDELPNVQELWA 98 >UniRef50_B8KWG3 Ribosomal protein L4/L1e n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KWG3_9GAMM Length = 86 Score = 90.2 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 49/77 (63%), Positives = 65/77 (84%) Query: 125 SVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 +E PKTKLLA++LK LE+VLII+ E+D+NL+LA+RNLH+VDV D G++PVSL+AFD Sbjct: 10 DLEQPKTKLLAEQLKGFGLENVLIISSEVDKNLYLASRNLHRVDVSDVEGVNPVSLVAFD 69 Query: 185 KVVMTADAVKQVEEMLA 201 KV++T DAVK+ EE LA Sbjct: 70 KVLVTVDAVKKFEEALA 86 >UniRef50_C7DIC7 Ribosomal protein L4/L1e n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIC7_9EURY Length = 261 Score = 89.8 bits (222), Expect = 5e-17, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 83/253 (32%), Gaps = 53/253 (20%) Query: 1 MELVLKDAQSALTVS-ETTFGRDFNEALVHQVVVAYAAGARQG----------TRAQKTR 49 ++++ D + + F + L+ + +A Q T AQ Sbjct: 5 IDVLNIDGKKDHKLDLAEVFDTEIEPWLIRRAAIAENTYGLQPQGHFPLAGMQTTAQYYG 64 Query: 50 AEVTGS-----GKKPWRQKGTGRARSGS-IKSPIWRSGGVTFA-ARPQDHSQKVNKKMYR 102 A ++ G+ ++ G G + P G + +K+NKK Y+ Sbjct: 65 AMMSYRTGRHMGRAIRPREKLGGGVQGKVKRIPSSVKGKRAHPHMIEKKLVEKMNKKEYQ 124 Query: 103 GALKSILSELVRQDRL------IVVEKFSVEAPKTKLLAQKLKDMAL------------- 143 A+KS ++ + IV K+K + + LK + + Sbjct: 125 AAIKSAIAYSASSNLASGVETPIVFSDTLESVKKSKDIIKMLKAINIYKLISDKSKREKG 184 Query: 144 -----------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLI---AFDKV-VM 188 + + II D+ A+RN+ + + + L+ V + Sbjct: 185 TSRRTQRKAFSKKIAIIVLN-DDGAVRASRNIPGITAVKLSALKVNDLVPGGEHPLVPIW 243 Query: 189 TADAVKQVEEMLA 201 + A+K ++ +A Sbjct: 244 SESALKSIDHEIA 256 >UniRef50_A2DAA4 Ribosomal protein, putative n=3 Tax=Trichomonas vaginalis RepID=A2DAA4_TRIVA Length = 370 Score = 88.6 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 83/251 (33%), Gaps = 58/251 (23%) Query: 6 KDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQG-----TRAQKTRAEVTGSGK--- 57 S + + F +V +V V A A+Q +K A G+G+ Sbjct: 13 GQKASTIELP-KVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGRAKA 71 Query: 58 KPWRQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGAL---------- 105 + R G+G R+G + GG F + + V + + A+ Sbjct: 72 RVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVV 131 Query: 106 -----KSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL----EDVL--------- 147 + + V++ ++VV+ E +T+ + LK + + + VL Sbjct: 132 PLVQARGHILGEVKEVPIVVVDAVQ-EIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSK 190 Query: 148 --------------IITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV----VMT 189 ++ D+ + A RN+ V+ + L +V + T Sbjct: 191 GKFRRAAYKTKKGPLVIYNEDKGIVKAFRNIPGVETISVKALALAKLAPAAQVGRLTIWT 250 Query: 190 ADAVKQVEEML 200 A K ++ + Sbjct: 251 ESAFKALDGIY 261 >UniRef50_Q7YN80 Ribosomal protein L4 n=1 Tax=Eimeria tenella RepID=Q7YN80_EIMTE Length = 213 Score = 82.5 bits (203), Expect = 7e-15, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 7/148 (4%) Query: 44 RAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRG 103 + ++ S KKPW+QKG G ARSGS KSP+W+ G F + + + K + Sbjct: 68 SNTINKNNLSKSTKKPWKQKGLGMARSGSFKSPLWKGGIKLFGPKNRIINIIFQIKKKKL 127 Query: 104 ALKSILSELVRQDRLIVVEKFSVEAPKTKLLA---QKLKDMALEDVLIITGELDENLFLA 160 +L +++ K +++K + ++ I + N+ Sbjct: 128 NFFYLLLNKRTYISFTSYNAYNIYFNNFKEYLNKQKRIKGIFSNKIIYILLNNNINIKK- 186 Query: 161 ARNLHKVDVRDATGIDPVSLIAFDKVVM 188 + + ++ +S + F+ ++ Sbjct: 187 ---TNYPFILSIKSLNIISFLKFNYIIF 211 >UniRef50_Q4FXU6 Ribosomal protein L1a, putative n=2 Tax=Kinetoplastida RepID=Q4FXU6_LEIMA Length = 432 Score = 80.2 bits (197), Expect = 4e-14, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 66/228 (28%), Gaps = 55/228 (24%) Query: 9 QSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAE-----VTGSGK---KPW 60 + F +V V A +RQ + G+G+ + Sbjct: 18 VGTCPLP-AVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHSWGTGRAVARIP 76 Query: 61 RQKGTGRARSGSIKSPIWRSGGVTFAARP--QDHSQKVNKKMYRGALKSIL--------- 109 R G G + SG+ GG FA + +K+N R A+ S L Sbjct: 77 RISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSLV 136 Query: 110 -SELVRQDRL----IVVEKFSVEAPKTKLLAQKLKDMAL--------------------- 143 S + + +VVE KTK LK +A Sbjct: 137 MSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMR 196 Query: 144 -------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFD 184 +++ + A RN+ +D+ + + + + L Sbjct: 197 NRRYVARRGPMLVMP--NNKGTRAFRNIFGLDLANVSALTLLHLAPGG 242 >UniRef50_D1ZWQ9 Whole genome shotgun sequence assembly, contig_1528 n=2 Tax=cellular organisms RepID=D1ZWQ9_SORMA Length = 180 Score = 79.4 bits (195), Expect = 6e-14, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%) Query: 107 SILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDV-LIITGELDEN-LFLAARNL 164 LS + L+V++ +VE KT++L L + L+I G+ EN LAARNL Sbjct: 1 MALSSHAKAGSLVVLDGLTVENGKTQVLLGNLAKLGFGKTSLVIDGDAVENTFALAARNL 60 Query: 165 HKVDVRDATGIDPVSLIAFDKVVMT 189 +V+V A G + ++ D + + Sbjct: 61 RQVNVLPAGGANVYDILKHDTLAID 85 >UniRef50_A8B7H8 Ribosomal protein L4 n=2 Tax=Giardia intestinalis RepID=A8B7H8_GIALA Length = 316 Score = 74.8 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 69/255 (27%), Gaps = 63/255 (24%) Query: 3 LVLKDAQSA--LTVS-ETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTR-----AEVTG 54 + + + F +++ V R + A G Sbjct: 5 VKVFGPTGTQVAELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWG 64 Query: 55 SGKKPWRQKGTGRARSGSIKSPIW-RSGGVTFAARP-QDHSQKVNKKMYRGALKS----- 107 G+ R R G + R G + + +KVN R A+ S Sbjct: 65 PGRAVARLP---RKHGGIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAAS 121 Query: 108 -------ILSELVRQDRLI--VVEKFSVEAPKTKLLAQKLKDMAL--------------- 143 + I VV+ +V KTK +K + + Sbjct: 122 ANAALVEARGHRIADVPSIPLVVDTDNVT--KTKDALAIIKAVGVLRDVERCKDSRHIRA 179 Query: 144 -------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----V 186 + L+I D + RNL VD+ + I + L + Sbjct: 180 GRGKMRNRRYITRKGPLVIYNTED--VARGFRNLPGVDLCHVSSIRLLELAPGSHPGRLI 237 Query: 187 VMTADAVKQVEEMLA 201 + T A ++++ A Sbjct: 238 LWTKSAFASLDDVYA 252 >UniRef50_Q00UB0 Ribosomal protein RPL1/RPL2/RL4L4 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00UB0_OSTTA Length = 404 Score = 74.8 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 74/263 (28%), Gaps = 66/263 (25%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGT----------RAQKTRAEV 52 + +++ A F +V+ V A T K Sbjct: 8 VTVQNGNGASCAMPEVFLSPIRADIVN-AVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCT 66 Query: 53 TGSGKKPWRQKGTGRARSGSIK--------SPIWRSGGVTFAARPQDHSQKVNKKMYRGA 104 KP G ARS + +P+ A + ++VN K R A Sbjct: 67 DVPATKPRPSPGAPVARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYA 126 Query: 105 LKSILSELVRQDRLI--------------VVEKFSVEAPKTKLLAQKLKDMAL------- 143 + S ++ L+ VV+ + KT + LK + Sbjct: 127 VCSAIAASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKV 186 Query: 144 ---------------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIA 182 L++ E + + A RN+ V++ + ++L Sbjct: 187 KASRNVRSGKGKMRNRRYVQRRGPLVVYSEDN-GVTRAFRNIPGVELCSVDRLGLLTLAP 245 Query: 183 FDKV----VMTADAVKQVEEMLA 201 V + T A ++++ + Sbjct: 246 GGHVGRFIIWTKSAFEKLDSIFG 268 >UniRef50_Q05FI6 Ribosomal protein L4 n=4 Tax=Candidatus Carsonella ruddii RepID=Q05FI6_CARRP Length = 172 Score = 69.4 bits (169), Expect = 6e-11, Method: Composition-based stats. Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%) Query: 49 RAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSI 108 R V GSGKKPW QKGTGRAR+G KSPIWRSGGVTF+ ++ K KK + L ++ Sbjct: 43 RRLVFGSGKKPWIQKGTGRARAGDKKSPIWRSGGVTFS----NYLFKKKKKKQKNVLINL 98 Query: 109 LSELVRQDRLIVVE 122 ++ L+ +++ + + Sbjct: 99 INLLIYSNKIFIFD 112 >UniRef50_Q4Y0D5 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium chabaudi RepID=Q4Y0D5_PLACH Length = 127 Score = 66.7 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 39/86 (45%) Query: 27 LVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFA 86 L+ ++ Y + + K R+ + S KK QKGTG+AR ++ S + + G TF Sbjct: 41 LLIYIIKYYYLNSIYRYKNTKNRSLINFSKKKIRVQKGTGKARLKTLSSTVCKQGACTFG 100 Query: 87 ARPQDHSQKVNKKMYRGALKSILSEL 112 + K NK +Y+ +L Sbjct: 101 PFYKSKIIKYNKFIYKLIFIYLLINK 126 >UniRef50_C5Y5B1 Putative uncharacterized protein Sb05g022750 n=1 Tax=Sorghum bicolor RepID=C5Y5B1_SORBI Length = 64 Score = 65.9 bits (160), Expect = 8e-10, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 29/98 (29%), Gaps = 36/98 (36%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSG 71 + + + F + +VH V GT K E Sbjct: 1 MVLDDDVFDVPIRKDIVHWV----------GTHLTKAIGE-------------------- 30 Query: 72 SIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSIL 109 + G +P+ H+ K+ KK+ R LK L Sbjct: 31 ------FHGGATIHGPKPRIHAIKLQKKVRRLGLKIAL 62 >UniRef50_A9A5J3 Ribosomal protein L4/L1e n=2 Tax=Thaumarchaeota RepID=A9A5J3_NITMS Length = 271 Score = 62.4 bits (151), Expect = 8e-09, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 70/254 (27%), Gaps = 65/254 (25%) Query: 3 LVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGAR--QGTRAQKTRAEVTGSGKKPW 60 + + F F L+H+ + QG + V S Sbjct: 8 TTTGTKDGEVELP-AVFSTPFRRELIHKAFTNLTSHKFQPQGRHPTAGQDVVADSND--- 63 Query: 61 RQKGTGRARSGSIK------------SPIWRSGGVTFAARPQDHSQ-KVNKKMYRGALKS 107 G G +R + R G + K+NKK + AL S Sbjct: 64 PPTGQGVSRVARAQGGGGGRQGQGAEVASTRGGRQAHPPIVEKVIYKKLNKKEKKLALCS 123 Query: 108 ILSELVRQDRL--------------IVVEKFSVEAPKTKLLAQKLKDMAL---------- 143 ++ +DR+ IVV KT +++ L + L Sbjct: 124 AIAATASKDRVESRGHKVEGIESFPIVVSDDIESVSKTSEVSKILDSLKLTQDVQRLETR 183 Query: 144 -----------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAF--- 183 + VL +T + N+ A L V+ + + L Sbjct: 184 KARSGQSRLRGRSKKVGKSVLFVTKDAS-NISKAIGALPGVEATSVKDLSVLDLAPGSDP 242 Query: 184 -DKVVMTADAVKQV 196 V + A++++ Sbjct: 243 IRLTVYSKSAIEEI 256 >UniRef50_Q5BZ19 SJCHGC04542 protein (Fragment) n=2 Tax=Schistosoma japonicum RepID=Q5BZ19_SCHJA Length = 167 Score = 62.1 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVT-GSGKKPWRQ 62 + + + F LVH+ + A R TRAE+ G+ KKPW Q Sbjct: 91 NTQSLVGMVDLHPDIFAVFPRIDLVHKNLYWQAHYRLIDWRCITTRAELPYGTRKKPWPQ 150 Query: 63 KG 64 K Sbjct: 151 KK 152 >UniRef50_D2EG73 Ribosomal protein L4/L1e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EG73_9EURY Length = 237 Score = 61.3 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 64/223 (28%), Gaps = 60/223 (26%) Query: 4 VLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQ-----GTRAQKTRAEVTGSGKK 58 + ++ + E F N + + +A + Q ++ A +T + Sbjct: 7 IDGKESGSIELPE-VFNTPVNYQTLKKAFLAEDSERFQLKYTDPMAGKRKVARLTKRRRS 65 Query: 59 PWRQKGTGRAR--------SGSI------KSPIWRSGGVTFAARPQDHSQK-VNKKMYRG 103 G G R G+ +P G + + K +NKK R Sbjct: 66 YKTSYGRGLDRTPRKTLSKVGTNFYYVGPVAPNTVGGREAHPPQAEKRLVKGINKKEKRM 125 Query: 104 ALKSILSELVRQDRL-------------IVVEKFSVEAPKTKLLAQKLKDMALED----- 145 A+K ++ + IV++ KTK + L + LE+ Sbjct: 126 AIKMGIAASANIKEVSKFHNLGGLKELPIVIDGNLETLKKTKDAIKLLSAIGLENELNRV 185 Query: 146 ---------------------VLIITGELDENLFLAARNLHKV 167 L+I +E A NL+ V Sbjct: 186 LNKKIRSGKGKLRGRKYKRKLSLVIVTGNEEKTSKAFSNLNTV 228 >UniRef50_UPI0000E47D01 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E47D01 Length = 89 Score = 59.8 bits (144), Expect = 6e-08, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%) Query: 156 NLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEML 200 N A + +V A G++ S++ +V+T DAV +E+ L Sbjct: 4 NFLEAVNGIKTFNVLSAEGLNVYSMLKHKTLVLTLDAVNLLEQRL 48 >UniRef50_Q25805 Rpl4 protein n=1 Tax=Plasmodium falciparum 3D7 RepID=Q25805_PLAF7 Length = 190 Score = 57.8 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 43 TRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR 102 + K +++V S KK QKG G+AR + KSP+ + G F K NK + + Sbjct: 53 YKHTKNKSKVYFSNKKIRVQKGLGKARLKNFKSPVCKQGACNFGP-----FYKENKIISK 107 Query: 103 GALKSILSELVRQDR 117 + I L+ R Sbjct: 108 INYRLIFVYLLINKR 122 >UniRef50_B9W418 Putative ribosomal protein conserved domain L4/L1 family (Fragment) n=1 Tax=Histomonas meleagridis RepID=B9W418_9EUKA Length = 275 Score = 56.7 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 4/57 (7%) Query: 148 IITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMTADAVKQVEEML 200 ++ DE + A RN+ V+++ + L K V+ T A K ++E+ Sbjct: 61 LVVYNKDEGVVKAFRNIPGVEIQSVHRLSIYQLAPAGKMGRLVIWTESAFKALDEIY 117 >UniRef50_Q5MGK5 Ribosomal protein 23 n=3 Tax=Neoptera RepID=Q5MGK5_LONON Length = 274 Score = 53.6 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 31/114 (27%) Query: 119 IVVEKFSVEAPKTKLLAQKLKDMA-LEDVL--------------------------IITG 151 +VV E KTK L+ + DVL +I Sbjct: 17 LVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKGPLIIY 76 Query: 152 ELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKV----VMTADAVKQVEEMLA 201 D+ L + RN+ VD+ + ++ + L V + T A ++++ + Sbjct: 77 NKDQGLTRSFRNIPGVDMVNVNKLNLLHLAPGGHVGRFMIWTQSAFERLDAIFG 130 >UniRef50_C5LQ28 60S ribosomal subunit protein L4, putative n=4 Tax=Perkinsus marinus ATCC 50983 RepID=C5LQ28_9ALVE Length = 271 Score = 52.4 bits (125), Expect = 9e-06, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 37/115 (32%), Gaps = 33/115 (28%) Query: 119 IVVEKFSVEAPKTKLLAQKLKDMAL----------------------------EDVLIIT 150 +V+ + KTK L+ + L++ Sbjct: 29 LVLSEGVESVQKTKDAVAVLEALGAGADVQRVKDSKKIRAGAGKMRNRRYVMRRGPLVVY 88 Query: 151 GELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMTADAVKQVEEMLA 201 E D+ L A RN+ +++ ++ + + ++ T A +++++ Sbjct: 89 AE-DDGLTKAFRNIPGIELCQVDRLNLLQVAPGGTFGRFIIWTQPAFDRLQQLFG 142 >UniRef50_Q3LWC7 Ribosomal protein L4A n=1 Tax=Bigelowiella natans RepID=Q3LWC7_BIGNA Length = 278 Score = 52.0 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 5/88 (5%) Query: 37 AGARQGTRAQKTRAEVTGSGK---KPWRQKGTGRARSGSIKSPIWRSGGVTFAARP--QD 91 + + A+ G G+ + R KG+G ++G GG F R + Sbjct: 52 KNIKYNNSGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKK 111 Query: 92 HSQKVNKKMYRGALKSILSELVRQDRLI 119 + K N+K+ A K+ L + + ++ Sbjct: 112 WNIKTNRKVKVSAFKTALLSTLFETLVV 139 >UniRef50_D1I7T8 Whole genome shotgun sequence of line PN40024, scaffold_208.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1I7T8_VITVI Length = 398 Score = 51.7 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 32/135 (23%) Query: 98 KKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMAL-------------- 143 K + + + + +V+ + KT LK Sbjct: 4 KVIKKKIMARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIH 63 Query: 144 --------------EDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK---- 185 + LI+ G L A RN+ V+V + ++ + L Sbjct: 64 PGKGKMRNRRYISRKGPLIVYGMEGAKLVKAFRNIPGVEVANVDRLNLLKLAPGGHLGRF 123 Query: 186 VVMTADAVKQVEEML 200 V+ T + ++++ + Sbjct: 124 VIWTKSSFEKLDSIY 138 >UniRef50_Q95YH2 Ribosomal protein L4 (Fragment) n=1 Tax=Paramecium caudatum RepID=Q95YH2_PARCA Length = 252 Score = 51.3 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 35/113 (30%), Gaps = 32/113 (28%) Query: 121 VEKFSVEAPKTKLLAQKLKDMAL----------------------------EDVLIITGE 152 VE KTK LK + L++ Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60 Query: 153 LDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMTADAVKQVEEMLA 201 + L A RN+ V+V + T ++ + L + V+ T A ++++ Sbjct: 61 ENAKLLKAFRNVPGVEVVNVTRLNLLQLAPGGQLGRFVIWTQSAFANLDKLFG 113 >UniRef50_UPI0001BCE474 50S ribosomal protein L4 n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCE474 Length = 178 Score = 51.3 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 19/48 (39%) Query: 147 LIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVK 194 L+ D + RN+ V + ++ ++ D ++ T +A Sbjct: 2 LVAVTREDVVTAKSLRNVADVVILPFDQLNTYDVLKSDDLIFTREAFD 49 >UniRef50_Q5CLD6 60S ribosomal protein-like n=1 Tax=Cryptosporidium hominis RepID=Q5CLD6_CRYHO Length = 212 Score = 48.6 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Query: 145 DVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDK----VVMTADAVKQVEEML 200 L+I E + + A RN+ VD ++ + L + T A+K+++E+ Sbjct: 27 GPLVIYAEDN-GIVKAMRNIKGVDTCSVERLNLLRLAPGGTFGRLTIFTKGAIKRLQEIY 85 Query: 201 A 201 Sbjct: 86 G 86 >UniRef50_B7XRA0 LSU ribosomal protein L1E (Fragment) n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XRA0_ENTBH Length = 197 Score = 45.1 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 35/115 (30%) Query: 119 IVVEKFSVEAPKTKLLAQKLKDMALE----------------------------DVLIIT 150 +VV + KT+ Q L++M LE +LI+ Sbjct: 26 LVVSDTISDIRKTQEAYQMLQNMNLEQDLKKVRESKTITCGKGKFRGRRYSKRTGLLIVH 85 Query: 151 GELDENLFLAARNLHKVDVRDATGIDPVSL----IAFDKVVMTADAVKQVEEMLA 201 A N+ V++ + ++ + L ++ T A K++E + + Sbjct: 86 DNA---ALSAFSNIEGVELANVNSLNLLRLCPGGHLGRLILWTESAFKKLEVIFS 137 >UniRef50_B6TX31 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B6TX31_MAIZE Length = 165 Score = 44.3 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 6/55 (10%) Query: 12 LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQK-----TRAEVTGSGKKPWR 61 + + FG +V + RQ + T AE G+G+ R Sbjct: 25 IALPP-VFGAPIRPDVVRFTHKLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSR 78 >UniRef50_B2A4H6 Glycosyl transferase family 2 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4H6_NATTJ Length = 336 Score = 42.0 bits (98), Expect = 0.011, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Query: 99 KMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLF 158 K + A+ S LS+ LIVV S ++ KT L ++ + V +I E ++ Sbjct: 16 KFLQQAIDSALSQTYPSTDLIVVNDGSTDSTKT-----ILDNLNDQRVTVIHLEENQGAA 70 Query: 159 LAARNLHKVDVRDATGIDPVS 179 A N+ ++ I Sbjct: 71 NAL-NI-GIEQASGNWISIHD 89 >UniRef50_Q18CM4 Putative phosphoribosyl transferase (Putative competence protein) n=6 Tax=Clostridium RepID=Q18CM4_CLOD6 Length = 260 Score = 40.5 bits (94), Expect = 0.033, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 31/76 (40%), Gaps = 7/76 (9%) Query: 88 RPQDHSQKVNKKMYRGALKSILSEL-----VRQDRLIVVEKFSVEAPKTKLLAQKLKDMA 142 + K+NKK + LK++ + +++++ T +++ LK Sbjct: 181 KYTRMLYKLNKKERKEELKNVFVVKENVKLINNKNILLIDDIFTTGLTTNEISKLLKLSG 240 Query: 143 LEDVLIITG--ELDEN 156 V ++T + ++N Sbjct: 241 ANKVFVLTLLTKANDN 256 >UniRef50_A6L3D7 Phosphate starvation-inducible protein PhoH n=65 Tax=Bacteroidetes/Chlorobi group RepID=A6L3D7_BACV8 Length = 334 Score = 39.0 bits (90), Expect = 0.098, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 37/94 (39%), Gaps = 11/94 (11%) Query: 115 QDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDE---------NLFLAARNLH 165 D ++++++ T+ + L M + +I+TG++ + L A + L Sbjct: 221 NDAVVILDEAQNT--TTQQIKMFLTRMGMNTKMIVTGDMTQIDLPSSQTSGLIQALKILK 278 Query: 166 KVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEM 199 V ++ ++ V +A ++ EE Sbjct: 279 GVKGISFIELNKKDIVRHKLVTRIVEAYEKFEEK 312 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.168 0.467 Lambda K H 0.267 0.0512 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,406,502,484 Number of Sequences: 3077464 Number of extensions: 70590903 Number of successful extensions: 193791 Number of sequences better than 1.0e-01: 249 Number of HSP's better than 0.1 without gapping: 601 Number of HSP's successfully gapped in prelim test: 69 Number of HSP's that attempted gapping in prelim test: 192309 Number of HSP's gapped (non-prelim): 718 length of query: 201 length of database: 1,040,396,356 effective HSP length: 122 effective length of query: 79 effective length of database: 664,945,748 effective search space: 52530714092 effective search space used: 52530714092 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 90 (39.0 bits)