100 c1mkyA_ Probab=97.89   E-value=0.0013  Score=40.90  Aligned_columns=184  Identities=21%

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC-CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             8999879998888999999478858721799879-743898614333376761999888532556778887877777640
Q batch____        34 KIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQP-DIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYA  112 (555)
Q Consensus        34 ~~aivG~nGsGKSTLl~~l~G~~~p~~G~i~~~~-~~~i~~v~Q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~  112 (555)
                      .+||||+.++|||||++.|.|  ....+.....| .+.+-..+.-.....+.-                           
T Consensus         2 tVaivG~pNvGKStL~N~ltr--~~~~~~~~~~g~~~~lvDTpG~~~~~~~~~---------------------------   52 (407)
T c1mkyA_           2 TVLIVGRPNVGKSTLFNKLVK--DPVQDTVEWYGKTFKLVDTCGVFDNPQDII---------------------------   52 (407)
T ss_dssp             EEEEECCTTSSHHHHHHHHHC--CCSEEEEEETTEEEEEEECTTTTSSGGGCC---------------------------
T ss_pred             EEEEECCCCCCHHHHHHHHHC--CCEEEEEEECCEEEEEEECCCCCCCCHHHH---------------------------
T ss_conf             299977998888899999849--963999975998999995567310787799---------------------------


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCC-EEEECCCCC
Q ss_conf             5001355787777568999841481378989999998768601067416489899999999999761998-899848412
Q batch____       113 DPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPD-MLLLDEPTN  191 (555)
Q Consensus       113 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~l~~l~~~~~~LSgGqkqrv~lA~aL~~~p~-vllLDEPt~  191 (555)
                                                                            +++...-+...+.+.+ ++++=+...
T Consensus        53 ------------------------------------------------------~~~~~~~~~~~i~~aDlil~VvD~~~   78 (407)
T c1mkyA_          53 ------------------------------------------------------SQKXKEVTLNXIREADLVLFVVDGKR   78 (407)
T ss_dssp             ------------------------------------------------------CHHHHHHHHHHHTTCSEEEEEEETTT
T ss_pred             ------------------------------------------------------HHHHHHHHHHHHHHCCEEEEEECCCC
T ss_conf             ------------------------------------------------------89999999999986798999971898


Q ss_pred             CCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88989999999998873881999908977999967989998598999924988999753257999885447765434566
Q batch____       192 HLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEK  271 (555)
Q Consensus       192 ~LD~~~~~~l~~~L~~~~~tvi~vsH~~~~l~~~~d~i~~l~~G~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (555)
                      ++.+.....+ +.|++.+..++++-...+....                               ................
T Consensus        79 ~~~~~d~~i~-~~Lr~~~k~~ilv~NK~D~~~~-------------------------------~~~~~~~ef~~lg~~~  126 (407)
T c1mkyA_          79 GITKEDESLA-DFLRKSTVDTILVANKAENLRE-------------------------------FEREVKPELYSLGFGE  126 (407)
T ss_dssp             CCCHHHHHHH-HHHHHHTCCEEEEEESCCSHHH-------------------------------HHHHTHHHHGGGSSCS
T ss_pred             CCCHHHHHHH-HHHHHHCCCCCCCCCCCCCCCH-------------------------------HHHHHHHHHHHCCCCC
T ss_conf             7898799999-9998612543001100016672-------------------------------2468899998369982


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCEEEECCCE
Q ss_conf             66431100012210000112222344543333334542224565566886589998641123776662155115418959
Q batch____       272 ELEWVRQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAI  351 (555)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~l~~i~~~i~~Ge~  351 (555)
                      ..........+...-...-.....................                                       .
T Consensus       127 ~~~ISA~~g~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~---------------------------------------~  167 (407)
T c1mkyA_         127 PIPVSAEHNINLDTXLETIIKKLEEKGLDLESKPEITDAI---------------------------------------K  167 (407)
T ss_dssp             CEECBTTTTBSHHHHHHHHHHHHHHTTCCSSSCCCCCSCE---------------------------------------E
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------------------------------C
T ss_conf             8998624576233210011111111111122122344321---------------------------------------0


Q ss_pred             EEEECHHHCCHHHHHHHHHC
Q ss_conf             99855011683779999816
Q batch____       352 VGIIGPNGAGKSTLFRMISG  371 (555)
Q Consensus       352 ~~i~G~NGsGKSTLl~~l~G  371 (555)
                      ++++|..++|||||++.|+|
T Consensus       168 iaiiG~~n~GKSSLin~l~~  187 (407)
T c1mkyA_         168 VAIVGRPNVGKSTLFNAILN  187 (407)
T ss_dssp             EEEECSTTSSHHHHHHHHHT
T ss_pred             CCCCCCCCCCHHHHHHHHCC
T ss_conf             00237666652658887408