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| Job Description | P76483 | | Confidence | 5.44% | Date | Thu Jan 5 12:23:26 GMT 2012 |
| Rank | 50 | Aligned Residues | 34 |
| % Identity | 26% | Template | c3qfqE_ |
| PDB info |
PDB header:dna binding protein/dna | Chain: E: PDB Molecule:large t antigen; |
PDBTitle: asymmetric assembly of merkel cell polyomavirus large t-antigen origin2 binding domains at the viral origin
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| Resolution | 2.90 Å |
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65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
D | P | L | S | R | A | V | L | G | E | H | S | L | E | D | G | I | D | G | F | L | G | L | T | W | N | Q | E | L | A | A | T | I | D | R | L | E | S |
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| Template Conservation |   |
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| Template Sequence |   |
D | Y | L | S | H | A | V | Y | S | N | K | T | V | S | C | . |
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F | A | I | Y | T | T | S | D | K | A | I | E | L | Y | D | K | I | E | K |
| Template Known Secondary structure |   |
T | S | B |
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| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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321 | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | |
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. | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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