BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (78 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A7ZTI8 50S ribosomal protein L28 n=178 Tax=Bacteria Rep... 162 4e-39 UniRef50_C1DK04 50S ribosomal protein L28 n=56 Tax=Bacteria RepI... 135 3e-31 UniRef50_Q07WG2 50S ribosomal protein L28 n=21 Tax=Bacteria RepI... 130 2e-29 UniRef50_B1YV94 50S ribosomal protein L28 n=212 Tax=Bacteria Rep... 119 3e-26 UniRef50_Q7VRK1 50S ribosomal protein L28 n=16 Tax=Bacteria RepI... 105 4e-22 UniRef50_C3PF15 50S ribosomal protein L28 n=36 Tax=Actinobacteri... 86 4e-16 UniRef50_B3ERW9 50S ribosomal protein L28 n=43 Tax=cellular orga... 79 5e-14 UniRef50_A0K1X6 50S ribosomal protein L28 n=14 Tax=Bacteria RepI... 79 5e-14 UniRef50_UPI0001976DE4 ribosomal protein L28 n=1 Tax=Bifidobacte... 78 8e-14 UniRef50_Q2S6K2 50S ribosomal protein L28 n=5 Tax=Bacteroidetes ... 75 5e-13 UniRef50_Q3B2H1 50S ribosomal protein L28 n=9 Tax=Chlorobiaceae ... 75 7e-13 UniRef50_Q83IB6 50S ribosomal protein L28 n=25 Tax=Bacteria RepI... 75 8e-13 UniRef50_A5CV85 50S ribosomal protein L28 n=78 Tax=Bacteria RepI... 74 1e-12 UniRef50_Q5LCF5 50S ribosomal protein L28 n=30 Tax=Bacteroidetes... 72 5e-12 UniRef50_Q1V0W3 50S ribosomal protein L28 n=5 Tax=Bacteria RepID... 72 6e-12 UniRef50_C5VHU0 Ribosomal protein L28-related protein n=9 Tax=Pr... 70 3e-11 UniRef50_Q6MDF9 50S ribosomal protein L28 n=14 Tax=Chlamydiales ... 69 6e-11 UniRef50_A9WKB7 Ribosomal protein L28 n=3 Tax=Chloroflexus RepID... 68 1e-10 UniRef50_B2RM15 50S ribosomal protein L28 n=12 Tax=Bacteria RepI... 67 2e-10 UniRef50_A8FKN5 50S ribosomal protein L28 n=47 Tax=Epsilonproteo... 62 4e-09 UniRef50_A5G211 50S ribosomal protein L28 n=45 Tax=Alphaproteoba... 62 8e-09 UniRef50_Q31S95 50S ribosomal protein L28 n=4 Tax=cellular organ... 55 7e-07 UniRef50_O22795 50S ribosomal protein L28, chloroplastic n=33 Ta... 54 1e-06 UniRef50_C6BYE0 50S ribosomal protein L28 n=47 Tax=Bacteria RepI... 54 1e-06 UniRef50_A4YKZ2 50S ribosomal protein L28 n=74 Tax=Proteobacteri... 53 3e-06 UniRef50_A9SGN8 Predicted protein n=2 Tax=Physcomitrella patens ... 53 3e-06 UniRef50_B0SXP0 50S ribosomal protein L28 n=26 Tax=Alphaproteoba... 52 4e-06 UniRef50_Q8DG62 50S ribosomal protein L28 n=7 Tax=cellular organ... 52 7e-06 UniRef50_Q9FW34 Os05g0101400 protein n=10 Tax=cellular organisms... 51 1e-05 UniRef50_C5J7C0 50S ribosomal protein L28 n=2 Tax=Mycoplasma Rep... 51 1e-05 UniRef50_UPI00016B25B5 hypothetical protein cdiviTM7_00351 n=1 T... 50 2e-05 UniRef50_D2MQH7 Ribosomal protein L28 n=1 Tax=Bulleidia extructa... 50 2e-05 UniRef50_B0SEH0 50S ribosomal protein L28 n=6 Tax=Leptospira Rep... 50 3e-05 UniRef50_Q0SNG2 50S ribosomal protein L28 n=23 Tax=Borrelia RepI... 50 3e-05 UniRef50_P72851 50S ribosomal protein L28 n=28 Tax=cellular orga... 49 4e-05 UniRef50_A5IXN6 50S ribosomal protein L28 n=8 Tax=Bacteria RepID... 49 4e-05 UniRef50_C0QM36 50S ribosomal protein L28 n=5 Tax=Bacteria RepID... 49 5e-05 UniRef50_A9F3L1 50S ribosomal protein L28 n=1 Tax=Sorangium cell... 49 6e-05 UniRef50_B9Y7G9 Putative uncharacterized protein n=1 Tax=Holdema... 48 9e-05 UniRef50_Q73HZ5 50S ribosomal protein L28 n=18 Tax=Rickettsiales... 48 1e-04 UniRef50_P48129 50S ribosomal protein L28, cyanelle n=4 Tax=Euka... 48 1e-04 UniRef50_B1ZHJ4 50S ribosomal protein L28 n=55 Tax=cellular orga... 47 1e-04 UniRef50_D2UXL8 Predicted protein (Fragment) n=1 Tax=Naegleria g... 47 2e-04 UniRef50_A7HDC0 50S ribosomal protein L28 n=18 Tax=Bacteria RepI... 47 2e-04 UniRef50_A5UQX0 Ribosomal protein L28 n=4 Tax=Roseiflexus RepID=... 47 2e-04 UniRef50_Q2GE85 50S ribosomal protein L28 n=2 Tax=Neorickettsia ... 46 3e-04 UniRef50_A8GM58 50S ribosomal protein L28 n=15 Tax=Rickettsia Re... 46 4e-04 UniRef50_B2URC9 50S ribosomal protein L28 n=4 Tax=Verrucomicrobi... 45 5e-04 UniRef50_Q2SS02 50S ribosomal protein L28 n=20 Tax=Bacteria RepI... 45 5e-04 UniRef50_D1R4Y7 Putative uncharacterized protein n=1 Tax=Parachl... 44 0.001 UniRef50_A2RHS3 50S ribosomal protein L28 n=266 Tax=Bacteria Rep... 44 0.001 UniRef50_B1AIJ7 50S ribosomal protein L28 n=24 Tax=Bacteria RepI... 44 0.002 UniRef50_Q1AW97 50S ribosomal protein L28 n=97 Tax=Bacteria RepI... 44 0.002 UniRef50_A0L5U1 50S ribosomal protein L28 n=1 Tax=Magnetococcus ... 43 0.003 UniRef50_C5E271 KLTH0H02618p n=3 Tax=Saccharomycetaceae RepID=C5... 43 0.003 UniRef50_B5YHT7 Ribosomal protein L28 n=1 Tax=Thermodesulfovibri... 43 0.003 UniRef50_D1AWU8 Ribosomal protein L28 n=2 Tax=Fusobacteriaceae R... 43 0.004 UniRef50_P0A5V7 50S ribosomal protein L28-1 n=21 Tax=Corynebacte... 42 0.004 UniRef50_O77465 Large ribosomal protein L28 n=5 Tax=Toxoplasma g... 42 0.005 UniRef50_C7ND19 Ribosomal protein L28 n=4 Tax=Bacteria RepID=C7N... 41 0.012 UniRef50_Q4PE47 Putative uncharacterized protein n=2 Tax=Ustilag... 41 0.014 UniRef50_B9XT04 Ribosomal protein L28 n=1 Tax=bacterium Ellin514... 40 0.016 UniRef50_B7FY86 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 40 0.016 UniRef50_Q2GMW6 Putative uncharacterized protein n=1 Tax=Chaetom... 40 0.018 UniRef50_A4RWI5 Putative mitochondrial ribosomal protein L28 n=1... 40 0.026 UniRef50_A8F7S8 50S ribosomal protein L28 n=8 Tax=Bacteria RepID... 40 0.027 UniRef50_B2KAU3 50S ribosomal protein L28 n=4 Tax=Bacteria RepID... 39 0.037 UniRef50_Q6B8P2 50S ribosomal protein L28, chloroplastic n=1 Tax... 39 0.074 UniRef50_P36525 54S ribosomal protein L24, mitochondrial n=9 Tax... 38 0.088 UniRef50_C6D4E7 Ribosomal protein L28 n=4 Tax=Firmicutes RepID=C... 38 0.092 >UniRef50_A7ZTI8 50S ribosomal protein L28 n=178 Tax=Bacteria RepID=RL28_ECO24 Length = 78 Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 78/78 (100%), Positives = 78/78 (100%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 KKGIDTVLAELRARGEKY 78 KKGIDTVLAELRARGEKY Sbjct: 61 KKGIDTVLAELRARGEKY 78 >UniRef50_C1DK04 50S ribosomal protein L28 n=56 Tax=Bacteria RepID=RL28_AZOVD Length = 78 Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 66/77 (85%), Positives = 69/77 (89%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQVTGK PVTGNN SHA N T+RRFLPNL HRFWVESEKRFV LRVSAKGMR+ID Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIID 60 Query: 61 KKGIDTVLAELRARGEK 77 K+GID VLAELRARGEK Sbjct: 61 KRGIDVVLAELRARGEK 77 >UniRef50_Q07WG2 50S ribosomal protein L28 n=21 Tax=Bacteria RepID=RL28_SHEFN Length = 78 Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 58/77 (75%), Positives = 69/77 (89%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQVTGK+P+ GNNRSHA N+T+RRFLPNL +HRFW+E EKRFV LRVS KG+R+ID Sbjct: 1 MSRVCQVTGKKPMVGNNRSHAKNSTRRRFLPNLQNHRFWLEEEKRFVQLRVSTKGIRIID 60 Query: 61 KKGIDTVLAELRARGEK 77 KKGI+ ++ ELRARGEK Sbjct: 61 KKGIEVIVKELRARGEK 77 >UniRef50_B1YV94 50S ribosomal protein L28 n=212 Tax=Bacteria RepID=RL28_BURA4 Length = 77 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 56/76 (73%), Positives = 65/76 (85%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+RVCQVTGK P++GNN SHA N TKRRFLPNL + RFWVESE R+V LRVS G+R+ID Sbjct: 1 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLID 60 Query: 61 KKGIDTVLAELRARGE 76 K GID+VLA+LRARGE Sbjct: 61 KNGIDSVLADLRARGE 76 >UniRef50_Q7VRK1 50S ribosomal protein L28 n=16 Tax=Bacteria RepID=RL28_BLOFL Length = 79 Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 43/77 (55%), Positives = 63/77 (81%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR CQ+T K+P+ GN RSHA+NATKR F+PN+HSHRFW+E++K+F+ LR+S KG+R++D Sbjct: 1 MSRTCQITRKKPMNGNKRSHAMNATKRWFIPNIHSHRFWIENKKKFIKLRISTKGIRLVD 60 Query: 61 KKGIDTVLAELRARGEK 77 K GI+ L+ + + +K Sbjct: 61 KLGIEQFLSIVSFKNKK 77 >UniRef50_C3PF15 50S ribosomal protein L28 n=36 Tax=Actinobacteridae RepID=RL28_CORA7 Length = 78 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 39/77 (50%), Positives = 57/77 (74%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS +CQVTG++P G SH+ T RR+ PN+ R+++ SE R +TL VS KGM++ID Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLTVSTKGMKIID 60 Query: 61 KKGIDTVLAELRARGEK 77 + GI++V+A++RARGEK Sbjct: 61 RDGIESVVAKIRARGEK 77 >UniRef50_B3ERW9 50S ribosomal protein L28 n=43 Tax=cellular organisms RepID=RL28_AMOA5 Length = 83 Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 49/75 (65%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+VC +TGKRP GN SHA N TKRRF PNL +F+V ++ LRVS +R I+ Sbjct: 1 MSKVCDITGKRPRVGNKVSHANNKTKRRFYPNLQFKKFYVPETNSWIVLRVSTSVIRTIN 60 Query: 61 KKGIDTVLAELRARG 75 KKGI V+ E + +G Sbjct: 61 KKGILEVIKEAQRKG 75 >UniRef50_A0K1X6 50S ribosomal protein L28 n=14 Tax=Bacteria RepID=RL28_ARTS2 Length = 78 Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 39/77 (50%), Positives = 53/77 (68%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+ CQVTG P G++ SH+ KRRF PN+ R+WV S +R VTL+VSA+G++ ID Sbjct: 1 MAAHCQVTGAEPGFGHSISHSHRRNKRRFDPNIQKKRYWVPSLRRNVTLQVSARGIKTID 60 Query: 61 KKGIDTVLAELRARGEK 77 +GID V+A + ARG K Sbjct: 61 VRGIDVVVAAILARGVK 77 >UniRef50_UPI0001976DE4 ribosomal protein L28 n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976DE4 Length = 115 Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 38/72 (52%), Positives = 48/72 (66%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+ CQ+ G R TGN SH+ T+RRF PNL + R+WV S R VTL VS KGM+ ID Sbjct: 18 MSKQCQILGTRASTGNRVSHSHRKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKGMKTID 77 Query: 61 KKGIDTVLAELR 72 + GI+ LA +R Sbjct: 78 RIGIEAALARIR 89 >UniRef50_Q2S6K2 50S ribosomal protein L28 n=5 Tax=Bacteroidetes RepID=RL28_SALRD Length = 78 Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 50/75 (66%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R VTG+ PVTGN+ S + T RRF NLH RF++ SE R V L+VS+K ++ I+ Sbjct: 1 MARKDDVTGEGPVTGNSVSDSNQKTNRRFKRNLHEKRFYIPSEDRHVKLKVSSKTLKTIN 60 Query: 61 KKGIDTVLAELRARG 75 KKGI VL E R +G Sbjct: 61 KKGIQAVLEEARKQG 75 >UniRef50_Q3B2H1 50S ribosomal protein L28 n=9 Tax=Chlorobiaceae RepID=RL28_PELLD Length = 72 Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 33/63 (52%), Positives = 45/63 (71%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+VC +TGKRP GN SHA N + RF PNLH+ R W++ EKR+ +++SAK M++I Sbjct: 1 MSKVCVLTGKRPKYGNTVSHANNHRRTRFEPNLHTKRIWIDEEKRWAKVKLSAKAMKIIA 60 Query: 61 KKG 63 K G Sbjct: 61 KTG 63 >UniRef50_Q83IB6 50S ribosomal protein L28 n=25 Tax=Bacteria RepID=RL28_TROW8 Length = 78 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 40/77 (51%), Positives = 50/77 (64%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS VCQVTG P G SH+ TKRRF PN+ F+V + R VTL VS KG+R+ID Sbjct: 1 MSSVCQVTGASPGFGYAVSHSHRRTKRRFDPNVRRRTFYVATLGRRVTLNVSVKGLRLID 60 Query: 61 KKGIDTVLAELRARGEK 77 K+GID V+ +L +G K Sbjct: 61 KRGIDAVVRDLIKKGVK 77 >UniRef50_A5CV85 50S ribosomal protein L28 n=78 Tax=Bacteria RepID=RL28_CLAM3 Length = 78 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/77 (48%), Positives = 53/77 (68%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+ CQVTG P G+N SH+ TKRRF PN+ ++V S +R V L +SAKG++VID Sbjct: 1 MAATCQVTGAVPGFGHNISHSHRRTKRRFDPNVQKKTYYVPSLRRNVKLTLSAKGIKVID 60 Query: 61 KKGIDTVLAELRARGEK 77 +GI++V+ ++ ARG K Sbjct: 61 ARGIESVVKDILARGVK 77 >UniRef50_Q5LCF5 50S ribosomal protein L28 n=30 Tax=Bacteroidetes RepID=RL28_BACFN Length = 86 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 51/75 (68%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS++CQ+TGK+ + GNN SH+ TKR F NL + +F+ + +++L + A G+R+I+ Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSLCAAGLRIIN 60 Query: 61 KKGIDTVLAELRARG 75 KKG+D L + A+G Sbjct: 61 KKGLDAALNDAVAKG 75 >UniRef50_Q1V0W3 50S ribosomal protein L28 n=5 Tax=Bacteria RepID=Q1V0W3_PELUB Length = 107 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 36/63 (57%), Positives = 45/63 (71%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+ C++TGK P+ G+N SHA N TKRRFLPNL +F E KR +TL VS G+R +D Sbjct: 1 MSKKCELTGKIPMKGHNVSHANNKTKRRFLPNLKKAKFTSELLKRSLTLTVSNAGVRSVD 60 Query: 61 KKG 63 KKG Sbjct: 61 KKG 63 >UniRef50_C5VHU0 Ribosomal protein L28-related protein n=9 Tax=Prevotella RepID=C5VHU0_9BACT Length = 87 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 50/75 (66%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS++CQ+TGK+ G N SH+ + TKR F NL S +F+ E ++ L++SA G+R+I+ Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFYYVEEACWIQLKISAAGLRLIN 60 Query: 61 KKGIDTVLAELRARG 75 K G+D L + ++G Sbjct: 61 KVGLDAALKQAVSKG 75 >UniRef50_Q6MDF9 50S ribosomal protein L28 n=14 Tax=Chlamydiales RepID=RL28_PARUW Length = 91 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 13/89 (14%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MS+VCQVTG++P G + TKRRF PNL R W E RF+ Sbjct: 1 MSKVCQVTGRKPTRGYKYAIRGIAKKKKGIGLKVTGKTKRRFQPNLFKKRIWFAEENRFI 60 Query: 48 TLRVSAKGMRVIDKKGIDTVLAELRARGE 76 TL++S +R ID+ G+ V+ ++RA G+ Sbjct: 61 TLKLSTAALRTIDRLGVFAVVRKMRANGQ 89 >UniRef50_A9WKB7 Ribosomal protein L28 n=3 Tax=Chloroflexus RepID=A9WKB7_CHLAA Length = 84 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 3/75 (4%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C +TG+ P G N S + T RR+LPN+ R WV E+RFV L++SA +R I+ Sbjct: 1 MSRRCDLTGRSPSFGYNVSFSKRRTNRRWLPNVQKRRIWVPEEQRFVRLKLSAAALREIE 60 Query: 61 KKGIDTVLAELRARG 75 +KG+ L LR RG Sbjct: 61 RKGL---LQALRDRG 72 >UniRef50_B2RM15 50S ribosomal protein L28 n=12 Tax=Bacteria RepID=RL28_PORG3 Length = 79 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 2/76 (2%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRF-WVESEKRFVTLRVSAKGMRVI 59 MS++CQ+TGK+ + GNN SH+ TKR F NL +F WVE + +V LR+SA G+R+I Sbjct: 1 MSKICQITGKKAMVGNNVSHSKRRTKRVFDVNLFRKKFYWVEQDC-WVVLRISAAGLRLI 59 Query: 60 DKKGIDTVLAELRARG 75 +K G+D + +G Sbjct: 60 NKIGLDAAIKRAAEKG 75 >UniRef50_A8FKN5 50S ribosomal protein L28 n=47 Tax=Epsilonproteobacteria RepID=RL28_CAMJ8 Length = 64 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+RVCQ+TGK P+ GNN SHA N TKRRFLPNL + R +E + +R++A +R + Sbjct: 1 MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLE-DGTTRKMRIAASTLRTLK 59 Query: 61 KK 62 K+ Sbjct: 60 KQ 61 >UniRef50_A5G211 50S ribosomal protein L28 n=45 Tax=Alphaproteobacteria RepID=RL28_ACICJ Length = 100 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R C +TGK ++GNN SHA N ++RRFLPNL ++ V LRV+ +G+ I+ Sbjct: 1 MTRRCDITGKSVLSGNNVSHANNKSRRRFLPNLQDSALQSDALGHSVKLRVTPRGLATIE 60 Query: 61 KK-GIDTVLAE 70 +K G+D L + Sbjct: 61 QKGGLDAFLLD 71 >UniRef50_Q31S95 50S ribosomal protein L28 n=4 Tax=cellular organisms RepID=RL28_SYNE7 Length = 78 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 38/71 (53%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQ+TGK+ SH+ TKR NL R W RFV LR+S K ++ + Sbjct: 1 MSRVCQLTGKKANNAYAISHSHRRTKRLQNVNLQEKRIWWPEGNRFVKLRLSTKAIKTLQ 60 Query: 61 KKGIDTVLAEL 71 KKG+ EL Sbjct: 61 KKGLSAYAREL 71 >UniRef50_O22795 50S ribosomal protein L28, chloroplastic n=33 Tax=cellular organisms RepID=RK28_ARATH Length = 143 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 38/65 (58%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 R+C TGK+ N S + + TK+ NL R W E+ KRFV LR+S K ++ I+K Sbjct: 68 RICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKN 127 Query: 63 GIDTV 67 G+D V Sbjct: 128 GLDAV 132 >UniRef50_C6BYE0 50S ribosomal protein L28 n=47 Tax=Bacteria RepID=RL28_DESAD Length = 70 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/42 (59%), Positives = 29/42 (69%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVES 42 MS+VC + GK P TGNN SHA N TKRRF+PNL R + S Sbjct: 1 MSQVCDICGKGPQTGNNVSHAHNKTKRRFMPNLQKVRTQLPS 42 >UniRef50_A4YKZ2 50S ribosomal protein L28 n=74 Tax=Proteobacteria RepID=RL28_BRASO Length = 102 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++T K P G+ SH+ TKRRFLPNL + F ++ R V LRVS ++ +D Sbjct: 1 MSRRCELTAKGPQVGHKVSHSNIKTKRRFLPNLCNVTFISDALGRNVRLRVSTNAIKSVD 60 Query: 61 KK-GIDTVLAELRA 73 G+D L + A Sbjct: 61 HNGGLDAYLMKANA 74 >UniRef50_A9SGN8 Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SGN8_PHYPA Length = 129 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 37/66 (56%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 SR C +TGK+ G S + + TK PNL R W E KRFV LR+S K ++ I+K Sbjct: 53 SRRCDLTGKKANNGYKVSFSNHRTKHLQQPNLQYKRLWWEEGKRFVKLRISTKALKTIEK 112 Query: 62 KGIDTV 67 G+ + Sbjct: 113 NGLQAM 118 >UniRef50_B0SXP0 50S ribosomal protein L28 n=26 Tax=Alphaproteobacteria RepID=RL28_CAUSK Length = 101 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 3/79 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++TG P+ G+N SH+ TKRRFLP L +S + LR+S +R +D Sbjct: 1 MSRRCELTGIGPMVGHNVSHSNIKTKRRFLPALSPASLQSDSLGQTFKLRISNAALRTLD 60 Query: 61 -KKGIDTVLAELRARGEKY 78 + G+D L L A+ E+ Sbjct: 61 FRGGLDVFL--LGAKDEQL 77 >UniRef50_Q8DG62 50S ribosomal protein L28 n=7 Tax=cellular organisms RepID=RL28_THEEB Length = 78 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 39/70 (55%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQ+TGK+ SH+ TK+ NL R W KR+V LR+S K ++ ++ Sbjct: 1 MSRVCQLTGKKANNAYAISHSHRRTKKLQQVNLQWKRVWWPEGKRWVRLRLSTKAIKTLE 60 Query: 61 KKGIDTVLAE 70 +KG+ E Sbjct: 61 RKGLSAFAKE 70 >UniRef50_Q9FW34 Os05g0101400 protein n=10 Tax=cellular organisms RepID=Q9FW34_ORYSJ Length = 137 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 37/65 (56%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 R+C T K+ N S + + TK++ NL + W E KRFV LR+S K ++ I+K Sbjct: 62 RICPFTDKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEEGKRFVKLRLSTKALKTIEKH 121 Query: 63 GIDTV 67 G+D V Sbjct: 122 GLDAV 126 >UniRef50_C5J7C0 50S ribosomal protein L28 n=2 Tax=Mycoplasma RepID=C5J7C0_MYCCR Length = 64 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R +T K P++GNNRSHALNATKR+F NL S ++ + L+VSAK + + Sbjct: 1 MARRDDLTFKGPLSGNNRSHALNATKRKFNLNLQKVVITTSSGQK-IKLKVSAKTKKTLR 59 Query: 61 KKG 63 K+G Sbjct: 60 KQG 62 >UniRef50_UPI00016B25B5 hypothetical protein cdiviTM7_00351 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B5 Length = 68 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+ C +TGK GNN S +L TKR F PNL F V+ +K +T+ +S + +R + Sbjct: 1 MASRCDLTGKGKQYGNNVSFSLRRTKRVFKPNLQKKTFVVDGQK--ITMTLSTQAIRTLK 58 Query: 61 KKGI 64 KKGI Sbjct: 59 KKGI 62 >UniRef50_D2MQH7 Ribosomal protein L28 n=1 Tax=Bulleidia extructa W1219 RepID=D2MQH7_9FIRM Length = 67 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVI 59 MSRVC V+GK+ + GN RSH+L AT+R++ NL V+ + + TLR+SA+ ++ + Sbjct: 1 MSRVCTVSGKKALYGNKRSHSLRATRRKWNVNLQKVHMIVDGKPQ--TLRISARALKTL 57 >UniRef50_B0SEH0 50S ribosomal protein L28 n=6 Tax=Leptospira RepID=RL28_LEPBA Length = 96 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 42/70 (60%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R C VTGK GNN SH+ +R + N+ + + ++E E R+V +++S + +R + Sbjct: 1 MARTCVVTGKGTTAGNNVSHSHKKNRRIWKVNVITKKIFLEDENRWVRVKISTRALRTLR 60 Query: 61 KKGIDTVLAE 70 KKG+ + + Sbjct: 61 KKGLKVAIKD 70 >UniRef50_Q0SNG2 50S ribosomal protein L28 n=23 Tax=Borrelia RepID=RL28_BORAP Length = 92 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 13/81 (16%) Query: 1 MSRVCQVTGKRPVTGNN-------------RSHALNATKRRFLPNLHSHRFWVESEKRFV 47 M+R C++TGK+ + GNN R H TKR F NL + +F++ R + Sbjct: 1 MARKCEITGKKTMFGNNVPRKGLAKKKGGARQHIGVKTKRTFKVNLINKKFFIPDLGRSI 60 Query: 48 TLRVSAKGMRVIDKKGIDTVL 68 ++VSA +R I K G+D L Sbjct: 61 NIKVSANALRSISKIGLDAFL 81 >UniRef50_P72851 50S ribosomal protein L28 n=28 Tax=cellular organisms RepID=RL28_SYNY3 Length = 78 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 38/70 (54%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R CQ+TGK+ G SH+ TK+ NL R W RFV LR+S ++ ++ Sbjct: 1 MARRCQLTGKKANNGFAVSHSHRRTKKLQQANLQWKRVWWPEGNRFVRLRLSTTAIKTLE 60 Query: 61 KKGIDTVLAE 70 KGI+ + E Sbjct: 61 SKGINAMAKE 70 >UniRef50_A5IXN6 50S ribosomal protein L28 n=8 Tax=Bacteria RepID=RL28_MYCAP Length = 68 Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R Q+ GK P+ GN RSH++ ATKR+F NL S TLRVSAK ++ + Sbjct: 1 MARRDQLNGKGPLVGNLRSHSMIATKRKFNVNLQKITI-ANSNGTPTTLRVSAKTIKTLK 59 Query: 61 KKGI 64 +KGI Sbjct: 60 RKGI 63 >UniRef50_C0QM36 50S ribosomal protein L28 n=5 Tax=Bacteria RepID=RL28_DESAH Length = 74 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 32/53 (60%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSA 53 MS+ C++ GK+P+ GNN SHA N KRRF PNL + + + R + + S Sbjct: 1 MSKECKICGKKPMVGNNVSHAHNVNKRRFNPNLQRVKALFDGQVRRIDVCTSC 53 >UniRef50_A9F3L1 50S ribosomal protein L28 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3L1_SORC5 Length = 74 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 34/60 (56%) Query: 5 CQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKGI 64 +TGKR + N SH+ TKR L N+ + R WV RFV L ++ + +R IDK G+ Sbjct: 4 SDITGKRKLLAQNVSHSNIKTKRWQLVNIQTRRVWVPELNRFVKLNLTTRDIRTIDKIGV 63 >UniRef50_B9Y7G9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7G9_9FIRM Length = 64 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 42/59 (71%), Gaps = 2/59 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVI 59 MSRVC V+GK+ ++GN RSH+L+A++R++ NL + V+ + + + R+SA+ ++ + Sbjct: 1 MSRVCAVSGKKALSGNKRSHSLHASRRKWNVNLQKVKVMVDGKPQRI--RISARALKTL 57 >UniRef50_Q73HZ5 50S ribosomal protein L28 n=18 Tax=Rickettsiales RepID=RL28_WOLPM Length = 104 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVC++T ++ GN SH+ TKR FL NLH + + RV+ + +R ID Sbjct: 1 MSRVCELTNRKKSFGNKVSHSNRKTKRTFLLNLHKVTLTSDILNKKFRFRVATRTLRTID 60 Query: 61 KKG-IDTVLAELRA 73 KG +D L R Sbjct: 61 YKGDLDAFLLNTRT 74 >UniRef50_P48129 50S ribosomal protein L28, cyanelle n=4 Tax=Eukaryota RepID=RK28_CYAPA Length = 70 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 40/68 (58%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R C++TGK+ G SH+ TK NL + R W + KR++ L+VS K ++ + Sbjct: 1 MARQCELTGKKANNGYTVSHSHRRTKCLQKANLQTKRIWSPTLKRWLKLQVSTKVIKDLK 60 Query: 61 KKGIDTVL 68 +K ID +L Sbjct: 61 RKSIDALL 68 >UniRef50_B1ZHJ4 50S ribosomal protein L28 n=55 Tax=cellular organisms RepID=RL28_METPB Length = 101 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++TGK G+ SH+ TK RFLPNL + ++ R V LRV+A +R ++ Sbjct: 1 MSRRCELTGKAVQVGHLVSHSNRKTKCRFLPNLCNVTLQSDALNRRVRLRVTAHALRSVE 60 Query: 61 KK-GIDTVLAELR 72 + G+D L + R Sbjct: 61 HRGGLDAFLIKAR 73 >UniRef50_D2UXL8 Predicted protein (Fragment) n=1 Tax=Naegleria gruberi RepID=D2UXL8_NAEGR Length = 87 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 3/68 (4%) Query: 14 TGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAELR 72 TGN RS + TKR+++PN H + + E+ V LR ++K +R IDK G+D L E R Sbjct: 15 TGNQRSFSERKTKRKWMPNSHWVKLYSEALDTRVQLRATSKALRCIDKSGGLDNYLIETR 74 Query: 73 AR--GEKY 78 G +Y Sbjct: 75 PELVGSRY 82 >UniRef50_A7HDC0 50S ribosomal protein L28 n=18 Tax=Bacteria RepID=RL28_ANADF Length = 73 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/47 (48%), Positives = 29/47 (61%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFV 47 M+R C + GK P+ GNN SHA N +K R LPNL S R V+ + V Sbjct: 1 MARRCDICGKGPLVGNNVSHANNKSKTRSLPNLRSVRATVDGTVKHV 47 >UniRef50_A5UQX0 Ribosomal protein L28 n=4 Tax=Roseiflexus RepID=A5UQX0_ROSS1 Length = 91 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 11/79 (13%) Query: 5 CQVTGKRPVTGNNRSHALNA--------TKRRFLPNLHSHRFWVESEKRFVTLRVSAKGM 56 C +TGK+ G N H + T R F PN+H H +V R +TL +S K + Sbjct: 4 CDLTGKKVAFGRNIRHKASGGWARRAPKTNRTFRPNVHRHTIYVPEIGRSITLNLSTKAL 63 Query: 57 RVIDKKGIDTVLAELRARG 75 R I+KKG+ +A +R +G Sbjct: 64 RTINKKGL---IAAVRDQG 79 >UniRef50_Q2GE85 50S ribosomal protein L28 n=2 Tax=Neorickettsia RepID=RL28_NEOSM Length = 102 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS C +TG GN SH+ TK+RF+PNL + + K+ +VSAK +R ID Sbjct: 1 MSNSCDLTGHGWQNGNMVSHSNRKTKKRFMPNLQRVTVFSDVLKQKFRFKVSAKTIRTID 60 Query: 61 -KKGIDTVL 68 K G+D L Sbjct: 61 FKGGLDDFL 69 >UniRef50_A8GM58 50S ribosomal protein L28 n=15 Tax=Rickettsia RepID=RL28_RICAH Length = 97 Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 37/63 (58%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++TG + GNN SH+ T+RRF PNL S +F + L V+A+ + ++ Sbjct: 1 MSRKCELTGVGVLYGNNVSHSQRKTRRRFEPNLRSVKFTSDITAGKYRLSVNARCISSVE 60 Query: 61 KKG 63 K G Sbjct: 61 KAG 63 >UniRef50_B2URC9 50S ribosomal protein L28 n=4 Tax=Verrucomicrobia RepID=RL28_AKKM8 Length = 87 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 13/84 (15%) Query: 1 MSRVCQVTGKRPVTGN--NRS-----------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MSR+C + G P G +RS H R PNL R WV +FV Sbjct: 1 MSRICIIRGTMPHKGRRIHRSGLAKKKGGIGRHVTKTVNRTVFPNLQEKRIWVPELGQFV 60 Query: 48 TLRVSAKGMRVIDKKGIDTVLAEL 71 +++SAK +R I+K G L ++ Sbjct: 61 KMKISAKALRTINKNGAYNTLKKV 84 >UniRef50_Q2SS02 50S ribosomal protein L28 n=20 Tax=Bacteria RepID=RL28_MYCCT Length = 65 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R +TGK ++G +RSHALNATKR++ NL R E+ F ++VSA+ +R + Sbjct: 1 MARRDALTGKSALSGQSRSHALNATKRKWNLNLQKVRVMDENGSVF-NIKVSARTLRTLK 59 Query: 61 KK 62 K+ Sbjct: 60 KQ 61 >UniRef50_D1R4Y7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4Y7_9CHLA Length = 94 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 16/90 (17%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MS+VC VTGK+ G + TKRRF NL + W+ E RFV Sbjct: 1 MSKVCPVTGKKTTRGFKYAIRGIAKKKKGIGLKVTGKTKRRFKANLADRKLWLAEENRFV 60 Query: 48 TL-RVSAKGMRVIDKK--GIDTVLAELRAR 74 ++ +S G+R ++KK G+ + ++R++ Sbjct: 61 SIPNLSISGLRTLEKKEGGVAAYVRQVRSQ 90 >UniRef50_A2RHS3 50S ribosomal protein L28 n=266 Tax=Bacteria RepID=RL28_LACLM Length = 64 Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 MS+ C TG++ V+ NNRSHA+N TKR PNL E + T+ SAK ++ Sbjct: 1 MSKECYFTGRKTVSSNNRSHAMNQTKRVVKPNLQKVTILENGELK--TVWASAKALK 55 >UniRef50_B1AIJ7 50S ribosomal protein L28 n=24 Tax=Bacteria RepID=RL28_UREP2 Length = 64 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 2/64 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M++ Q+TGK P++GN RSHA+N +KRR+ NL + +++E + VSAK ++ + Sbjct: 1 MAKRDQLTGKGPLSGNTRSHAMNHSKRRWNVNL--QKATIKTENGSQRVLVSAKTLKTLK 58 Query: 61 KKGI 64 K + Sbjct: 59 KHNL 62 >UniRef50_Q1AW97 50S ribosomal protein L28 n=97 Tax=Bacteria RepID=RL28_RUBXD Length = 71 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 25/38 (65%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRF 38 M++VC GK P GN RSH+L AT+RR+ PNL R Sbjct: 1 MAKVCYSCGKGPSFGNARSHSLRATRRRWNPNLQKVRI 38 >UniRef50_A0L5U1 50S ribosomal protein L28 n=1 Tax=Magnetococcus sp. MC-1 RepID=RL28_MAGSM Length = 95 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R + GK P GN SH+ T+R+++PN+ + W + + V + +S +R +D Sbjct: 1 MARKRTLGGKAPQAGNKVSHSQRKTRRQWMPNIQTKALWSITLGQSVKVTISTSALRSVD 60 Query: 61 KK-GIDTVLAEL 71 G+D L ++ Sbjct: 61 NAGGLDNYLLKI 72 >UniRef50_C5E271 KLTH0H02618p n=3 Tax=Saccharomycetaceae RepID=C5E271_LACTC Length = 273 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%) Query: 15 GNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVL 68 GNN + + T+RR+LPN+ W E+ R V++R++AK +R + K+ GID L Sbjct: 97 GNNVAESKTKTRRRWLPNVIKKGLWSEALSRNVSIRMTAKVLRTVTKEGGIDNYL 151 >UniRef50_B5YHT7 Ribosomal protein L28 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHT7_THEYD Length = 62 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 22/37 (59%) Query: 5 CQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVE 41 C V GK+ V GNN SHA N TKR F PNL + E Sbjct: 4 CYVCGKKKVIGNNVSHANNKTKRYFFPNLQRMKIITE 40 >UniRef50_D1AWU8 Ribosomal protein L28 n=2 Tax=Fusobacteriaceae RepID=D1AWU8_STRM9 Length = 87 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 ++C+V GK+ GN SH+ ATKR + PNL + + ++ ++ V +RVS K M+ + K Sbjct: 2 QICEVFGKKVGHGNLVSHSNRATKRIWRPNLQTMKLMLDGKE--VKVRVSTKAMKTLKGK 59 Query: 63 GIDTV 67 D V Sbjct: 60 NEDQV 64 >UniRef50_P0A5V7 50S ribosomal protein L28-1 n=21 Tax=Corynebacterineae RepID=RL28A_MYCBO Length = 94 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 38/59 (64%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVI 59 MS CQ+TG+ G SH+ T+RR+ PN+ +++ SE R + +RVSA+G++VI Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVI 59 >UniRef50_O77465 Large ribosomal protein L28 n=5 Tax=Toxoplasma gondii RepID=O77465_TOXGO Length = 272 Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 SRVCQVTGKRPVT-GNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 +R C + GK T NRSH+ AT + NLH R W +V LR+S KG+R I Sbjct: 144 ARRCMLLGKMDNTKARNRSHSRVATHKVQRLNLHWKRLWWPEAGYYVRLRLSVKGIRTIK 203 Query: 61 KKGID 65 K G+ Sbjct: 204 KYGLQ 208 >UniRef50_C7ND19 Ribosomal protein L28 n=4 Tax=Bacteria RepID=C7ND19_LEPBD Length = 85 Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Query: 5 CQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKGI 64 C+V GK GN SH+ ATKR + PNL + + +E+ V +RV K M+ + K + Sbjct: 4 CEVFGKTVSHGNRVSHSHRATKRIWRPNLQTMLLTINNEE--VRVRVCTKAMKTLKGKNV 61 Query: 65 DTV 67 D V Sbjct: 62 DQV 64 >UniRef50_Q4PE47 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4PE47_USTMA Length = 157 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTV 67 GK +G+N + T R + PN+ S + W + RFV +VS +R +DK G+D Sbjct: 60 GKMIQSGHNVPKSRQKTARTWSPNIQSKKLWSNTLDRFVRAKVSTSALRSMDKMGGLDIY 119 Query: 68 LAE 70 LA+ Sbjct: 120 LAK 122 >UniRef50_B9XT04 Ribosomal protein L28 n=1 Tax=bacterium Ellin514 RepID=B9XT04_9BACT Length = 88 Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 15/73 (20%) Query: 1 MSRVCQVTGKRPVTGNN-------------RSHALNATKRRFLPNLHSHRFWVESEKRFV 47 M+R+C++TG P+ G++ +H TKRRF+PNL + + E R++ Sbjct: 1 MARICELTGTGPIKGSHIWRSGKAKKKGGIGTHVTAITKRRFMPNLQRVKAVINGEVRYI 60 Query: 48 TLRVSA--KGMRV 58 + SA KG+ V Sbjct: 61 RVTASAIKKGLVV 73 >UniRef50_B7FY86 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FY86_PHATR Length = 89 Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 SR GK TGNN S ++ ATKR F PN+ R + E V ++ +R IDK Sbjct: 15 SRRGLYDGKDVRTGNNVSFSMRATKRTFKPNVMIKRVYSEILDEMVKFHLTTSTLRSIDK 74 Query: 62 K-GIDTVL 68 G+D L Sbjct: 75 AGGLDNYL 82 >UniRef50_Q2GMW6 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2GMW6_CHAGB Length = 254 Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Query: 15 GNNRSHALN-ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVL 68 GNN S N T+R++ PN+H R W S FV RV+A+ +R +DK G+D L Sbjct: 88 GNNVSERNNIKTRRQWRPNVHHKRLWSASLGVFVRTRVTARVLRTVDKAGGLDEYL 143 >UniRef50_A4RWI5 Putative mitochondrial ribosomal protein L28 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RWI5_OSTLU Length = 125 Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 8 TGKRPVTGNNRSH-ALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG 63 GK GNN S N T+RR+LPN R + E + + +RV+A +R +DK G Sbjct: 27 AGKHIKFGNNVSEDGGNKTRRRWLPNAQKKRVYSELLEEMIPMRVTAHALRCMDKAG 83 >UniRef50_A8F7S8 50S ribosomal protein L28 n=8 Tax=Bacteria RepID=RL28_THELT Length = 65 Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M++ C++ GK PV G N SH+ T+R F PNL R E + T+RV + ++ Sbjct: 1 MAKRCEICGKGPVAGKNVSHSNRHTRRMFRPNLQKIRVITE-DGTVRTMRVCTRCLK 56 >UniRef50_B2KAU3 50S ribosomal protein L28 n=4 Tax=Bacteria RepID=RL28_ELUMP Length = 64 Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 25/43 (58%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESE 43 MS CQ+ GK VTG + SH+ TKR F PNL + +E + Sbjct: 1 MSYKCQLCGKGSVTGGSYSHSHRNTKRTFRPNLQKQKVVLEGK 43 >UniRef50_Q6B8P2 50S ribosomal protein L28, chloroplastic n=1 Tax=Gracilaria tenuistipitata var. liui RepID=RK28_GRATL Length = 64 Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M + C +TGK+ G SH+ TK+ NL + + W + +KR++ +++ K ++ + Sbjct: 1 MVKECTLTGKKSNNGYTVSHSHIRTKKIQHINLQTKKIWSDKQKRWIKIKICTKAIKSLH 60 Query: 61 K 61 K Sbjct: 61 K 61 >UniRef50_P36525 54S ribosomal protein L24, mitochondrial n=9 Tax=Saccharomycetaceae RepID=RM24_YEAST Length = 258 Score = 38.1 bits (87), Expect = 0.088, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 1/60 (1%) Query: 15 GNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAELRA 73 GNN S + T++++LPN+ W E+ R ++++++AK ++ I K+ GID L + ++ Sbjct: 82 GNNISESKAKTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNYLTKEKS 141 >UniRef50_C6D4E7 Ribosomal protein L28 n=4 Tax=Firmicutes RepID=C6D4E7_PAESJ Length = 62 Score = 38.1 bits (87), Expect = 0.092, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 30/53 (56%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSA 53 MSR C +TGK P TGN+ SHA N +R + N+ R V+ + + V + A Sbjct: 1 MSRKCFITGKSPGTGNHVSHANNKNRRSWGVNVQKVRILVDGKPKRVYVSTRA 53 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B1YV94 50S ribosomal protein L28 n=212 Tax=Bacteria Rep... 114 6e-25 UniRef50_C1DK04 50S ribosomal protein L28 n=56 Tax=Bacteria RepI... 113 1e-24 UniRef50_A7ZTI8 50S ribosomal protein L28 n=178 Tax=Bacteria Rep... 113 1e-24 UniRef50_Q07WG2 50S ribosomal protein L28 n=21 Tax=Bacteria RepI... 108 6e-23 UniRef50_C5VHU0 Ribosomal protein L28-related protein n=9 Tax=Pr... 102 3e-21 UniRef50_Q5LCF5 50S ribosomal protein L28 n=30 Tax=Bacteroidetes... 102 4e-21 UniRef50_A0K1X6 50S ribosomal protein L28 n=14 Tax=Bacteria RepI... 101 7e-21 UniRef50_A9SGN8 Predicted protein n=2 Tax=Physcomitrella patens ... 101 1e-20 UniRef50_B2RM15 50S ribosomal protein L28 n=12 Tax=Bacteria RepI... 100 2e-20 UniRef50_B3ERW9 50S ribosomal protein L28 n=43 Tax=cellular orga... 99 2e-20 UniRef50_C3PF15 50S ribosomal protein L28 n=36 Tax=Actinobacteri... 99 3e-20 UniRef50_UPI0001976DE4 ribosomal protein L28 n=1 Tax=Bifidobacte... 99 4e-20 UniRef50_A5CV85 50S ribosomal protein L28 n=78 Tax=Bacteria RepI... 99 5e-20 UniRef50_Q83IB6 50S ribosomal protein L28 n=25 Tax=Bacteria RepI... 97 1e-19 UniRef50_B0SXP0 50S ribosomal protein L28 n=26 Tax=Alphaproteoba... 95 8e-19 UniRef50_Q31S95 50S ribosomal protein L28 n=4 Tax=cellular organ... 94 1e-18 UniRef50_Q2S6K2 50S ribosomal protein L28 n=5 Tax=Bacteroidetes ... 94 1e-18 UniRef50_Q8DG62 50S ribosomal protein L28 n=7 Tax=cellular organ... 94 2e-18 UniRef50_A4YKZ2 50S ribosomal protein L28 n=74 Tax=Proteobacteri... 92 6e-18 UniRef50_Q7VRK1 50S ribosomal protein L28 n=16 Tax=Bacteria RepI... 91 7e-18 UniRef50_Q9FW34 Os05g0101400 protein n=10 Tax=cellular organisms... 91 1e-17 UniRef50_O22795 50S ribosomal protein L28, chloroplastic n=33 Ta... 91 1e-17 UniRef50_A9WKB7 Ribosomal protein L28 n=3 Tax=Chloroflexus RepID... 91 1e-17 UniRef50_P72851 50S ribosomal protein L28 n=28 Tax=cellular orga... 91 1e-17 UniRef50_A5G211 50S ribosomal protein L28 n=45 Tax=Alphaproteoba... 89 4e-17 UniRef50_B1ZHJ4 50S ribosomal protein L28 n=55 Tax=cellular orga... 88 8e-17 UniRef50_B0SEH0 50S ribosomal protein L28 n=6 Tax=Leptospira Rep... 85 5e-16 UniRef50_Q6MDF9 50S ribosomal protein L28 n=14 Tax=Chlamydiales ... 81 9e-15 UniRef50_P48129 50S ribosomal protein L28, cyanelle n=4 Tax=Euka... 81 1e-14 UniRef50_Q3B2H1 50S ribosomal protein L28 n=9 Tax=Chlorobiaceae ... 81 1e-14 UniRef50_Q1V0W3 50S ribosomal protein L28 n=5 Tax=Bacteria RepID... 81 1e-14 UniRef50_Q2GE85 50S ribosomal protein L28 n=2 Tax=Neorickettsia ... 80 3e-14 UniRef50_Q0SNG2 50S ribosomal protein L28 n=23 Tax=Borrelia RepI... 77 1e-13 UniRef50_A9F3L1 50S ribosomal protein L28 n=1 Tax=Sorangium cell... 77 2e-13 UniRef50_Q73HZ5 50S ribosomal protein L28 n=18 Tax=Rickettsiales... 76 2e-13 UniRef50_A8GM58 50S ribosomal protein L28 n=15 Tax=Rickettsia Re... 75 6e-13 UniRef50_UPI00016B25B5 hypothetical protein cdiviTM7_00351 n=1 T... 75 8e-13 UniRef50_A5UQX0 Ribosomal protein L28 n=4 Tax=Roseiflexus RepID=... 75 1e-12 UniRef50_A8FKN5 50S ribosomal protein L28 n=47 Tax=Epsilonproteo... 72 4e-12 UniRef50_C6BYE0 50S ribosomal protein L28 n=47 Tax=Bacteria RepI... 71 1e-11 UniRef50_A5IXN6 50S ribosomal protein L28 n=8 Tax=Bacteria RepID... 70 3e-11 UniRef50_B2URC9 50S ribosomal protein L28 n=4 Tax=Verrucomicrobi... 69 4e-11 UniRef50_C0QM36 50S ribosomal protein L28 n=5 Tax=Bacteria RepID... 69 6e-11 UniRef50_D2UXL8 Predicted protein (Fragment) n=1 Tax=Naegleria g... 69 6e-11 UniRef50_B1AIJ7 50S ribosomal protein L28 n=24 Tax=Bacteria RepI... 66 5e-10 UniRef50_D2MQH7 Ribosomal protein L28 n=1 Tax=Bulleidia extructa... 65 5e-10 UniRef50_C5J7C0 50S ribosomal protein L28 n=2 Tax=Mycoplasma Rep... 64 1e-09 UniRef50_A7HDC0 50S ribosomal protein L28 n=18 Tax=Bacteria RepI... 63 4e-09 UniRef50_D1R4Y7 Putative uncharacterized protein n=1 Tax=Parachl... 61 9e-09 UniRef50_Q2SS02 50S ribosomal protein L28 n=20 Tax=Bacteria RepI... 61 1e-08 UniRef50_B9Y7G9 Putative uncharacterized protein n=1 Tax=Holdema... 61 1e-08 UniRef50_A2RHS3 50S ribosomal protein L28 n=266 Tax=Bacteria Rep... 60 2e-08 Sequences not found previously or not previously below threshold: UniRef50_C1E354 Predicted protein n=2 Tax=Micromonas RepID=C1E35... 79 4e-14 UniRef50_A0L5U1 50S ribosomal protein L28 n=1 Tax=Magnetococcus ... 71 8e-12 UniRef50_P0A5V7 50S ribosomal protein L28-1 n=21 Tax=Corynebacte... 68 9e-11 UniRef50_A8P0U6 Putative uncharacterized protein n=1 Tax=Coprino... 68 1e-10 UniRef50_O77465 Large ribosomal protein L28 n=5 Tax=Toxoplasma g... 67 2e-10 UniRef50_Q2GMW6 Putative uncharacterized protein n=1 Tax=Chaetom... 66 3e-10 UniRef50_D1ZU12 Whole genome shotgun sequence assembly, scaffold... 66 4e-10 UniRef50_A6SKT3 Putative uncharacterized protein n=2 Tax=Sclerot... 66 5e-10 UniRef50_Q4UF36 50s ribosomal subunit protein L28, putative n=3 ... 65 6e-10 UniRef50_B9L2A7 50S ribosomal protein L28 n=4 Tax=Chloroflexi Re... 65 6e-10 UniRef50_Q6B8P2 50S ribosomal protein L28, chloroplastic n=1 Tax... 65 6e-10 UniRef50_Q1AW97 50S ribosomal protein L28 n=97 Tax=Bacteria RepI... 64 2e-09 UniRef50_B2ACV6 Predicted CDS Pa_3_11310 n=3 Tax=Eukaryota RepID... 64 2e-09 UniRef50_C5E271 KLTH0H02618p n=3 Tax=Saccharomycetaceae RepID=C5... 63 3e-09 UniRef50_D0LC20 Ribosomal protein L28 n=4 Tax=Actinobacteria (cl... 63 3e-09 UniRef50_A0D2P9 Chromosome undetermined scaffold_35, whole genom... 63 3e-09 UniRef50_A4RWI5 Putative mitochondrial ribosomal protein L28 n=1... 63 3e-09 UniRef50_C7QYT4 Ribosomal protein L28 n=5 Tax=Bacteria RepID=C7Q... 62 4e-09 UniRef50_Q9ZBR5 50S ribosomal protein L28-1 n=10 Tax=Actinobacte... 62 4e-09 UniRef50_D1AWU8 Ribosomal protein L28 n=2 Tax=Fusobacteriaceae R... 62 6e-09 UniRef50_A8F7S8 50S ribosomal protein L28 n=8 Tax=Bacteria RepID... 61 9e-09 UniRef50_B7FY86 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 61 1e-08 UniRef50_D0N116 Putative uncharacterized protein n=1 Tax=Phytoph... 61 1e-08 UniRef50_Q4Z7B7 50S ribosomal subunit protein L28, putative (Fra... 61 1e-08 UniRef50_Q4PE47 Putative uncharacterized protein n=2 Tax=Ustilag... 61 2e-08 UniRef50_C9SFC9 54S ribosomal protein L24 n=1 Tax=Verticillium a... 60 2e-08 UniRef50_B1L9P8 50S ribosomal protein L28 n=64 Tax=Bacteria RepI... 60 2e-08 UniRef50_A1CI14 50S ribosomal protein L24 n=8 Tax=Eurotiomycetid... 60 2e-08 UniRef50_B0D7Z1 Predicted protein n=2 Tax=Agaricomycetes RepID=B... 60 3e-08 UniRef50_P36525 54S ribosomal protein L24, mitochondrial n=9 Tax... 60 3e-08 UniRef50_C0H4C3 Organelle ribosomal protein L28, putative n=6 Ta... 60 3e-08 UniRef50_C6D4E7 Ribosomal protein L28 n=4 Tax=Firmicutes RepID=C... 59 5e-08 UniRef50_Q7RFP1 Ribosomal protein L28, putative n=1 Tax=Plasmodi... 59 6e-08 UniRef50_B8LKU8 Putative uncharacterized protein n=1 Tax=Picea s... 59 6e-08 UniRef50_Q8RDR9 50S ribosomal protein L28 n=10 Tax=Fusobacterium... 57 1e-07 UniRef50_C7ND19 Ribosomal protein L28 n=4 Tax=Bacteria RepID=C7N... 57 2e-07 UniRef50_Q01CK5 50S ribosomal protein L28 (ISS) n=2 Tax=Eukaryot... 57 2e-07 UniRef50_B2KAU3 50S ribosomal protein L28 n=4 Tax=Bacteria RepID... 57 2e-07 UniRef50_B5YHT7 Ribosomal protein L28 n=1 Tax=Thermodesulfovibri... 57 2e-07 UniRef50_B5YNJ8 RK28, ribosomal protein 28, 50S large ribosomal ... 56 2e-07 UniRef50_D0WND3 Conserved domain protein n=1 Tax=Actinomyces sp.... 56 4e-07 UniRef50_A5FQ75 LSU ribosomal protein L28P n=5 Tax=Dehalococcoid... 56 4e-07 UniRef50_A2QJ62 Contig An04c0180, complete genome n=8 Tax=Euroti... 56 5e-07 UniRef50_B2S2V9 50S ribosomal protein L28 n=4 Tax=Treponema RepI... 55 6e-07 UniRef50_B5Y795 50S ribosomal protein L28 n=1 Tax=Coprothermobac... 55 6e-07 UniRef50_B1C5T0 Putative uncharacterized protein (Fragment) n=1 ... 55 7e-07 UniRef50_C4QZ93 54S ribosomal protein L24, mitochondrial n=1 Tax... 55 7e-07 UniRef50_B9E1F2 50S ribosomal protein L28 n=22 Tax=Clostridia Re... 55 8e-07 UniRef50_UPI000150AA2C ribosomal protein L28 containing protein ... 54 1e-06 UniRef50_Q54TR3 Putative uncharacterized protein n=1 Tax=Dictyos... 54 1e-06 UniRef50_A7S0T2 Predicted protein (Fragment) n=1 Tax=Nematostell... 54 1e-06 UniRef50_B0S150 50S ribosomal protein L28 n=3 Tax=Clostridiales ... 54 1e-06 UniRef50_C0S6I5 50S ribosomal protein L24 n=3 Tax=Paracoccidioid... 54 1e-06 UniRef50_Q85G82 50S ribosomal protein L28, chloroplastic n=1 Tax... 54 2e-06 UniRef50_P75171 50S ribosomal protein L28 n=1 Tax=Mycoplasma pne... 53 2e-06 UniRef50_C1A4I8 50S ribosomal protein L28 n=1 Tax=Gemmatimonas a... 53 3e-06 UniRef50_C9M7F1 Ribosomal protein L28 n=1 Tax=Jonquetella anthro... 53 3e-06 UniRef50_B2A2L1 50S ribosomal protein L28 n=19 Tax=Bacteria RepI... 52 6e-06 UniRef50_C1MY26 Predicted protein n=1 Tax=Micromonas pusilla CCM... 51 1e-05 UniRef50_B6HQJ1 Pc22g07040 protein n=2 Tax=Penicillium RepID=B6H... 51 1e-05 UniRef50_C0QUB7 50S ribosomal protein L28 n=26 Tax=Bacteria RepI... 51 1e-05 UniRef50_B6JZM9 54S ribosomal protein L24 n=1 Tax=Schizosaccharo... 51 1e-05 UniRef50_B9WB70 Ribosomal protein, large subunit, mitochondrial,... 51 2e-05 UniRef50_C5FUM3 54S ribosomal protein L24 n=4 Tax=Onygenales Rep... 51 2e-05 UniRef50_C6UN83 Putative 50S ribosomal subunit protein L28 n=1 T... 50 2e-05 UniRef50_A4XIU8 LSU ribosomal protein L28P n=4 Tax=Bacteria RepI... 49 3e-05 UniRef50_B2W5T0 50S ribosomal protein L24 n=2 Tax=Pleosporineae ... 49 3e-05 UniRef50_A3LRR9 Predicted protein n=3 Tax=Pichia RepID=A3LRR9_PICST 49 5e-05 UniRef50_B9XT04 Ribosomal protein L28 n=1 Tax=bacterium Ellin514... 49 5e-05 UniRef50_C7PZL8 Ribosomal protein L28 n=2 Tax=Actinomycetales Re... 47 2e-04 UniRef50_A9V9D4 Predicted protein n=1 Tax=Monosiga brevicollis R... 47 2e-04 UniRef50_B3QZS8 50S ribosomal protein L28 n=1 Tax=Candidatus Phy... 46 3e-04 UniRef50_C4Z044 50S ribosomal protein L28 n=28 Tax=Bacteria RepI... 46 3e-04 UniRef50_D1CCP4 Ribosomal protein L28 n=1 Tax=Thermobaculum terr... 46 5e-04 UniRef50_UPI000023E9E7 hypothetical protein FG10744.1 n=1 Tax=Gi... 45 6e-04 UniRef50_Q6BSR2 DEHA2D06842p n=3 Tax=Saccharomycetales RepID=Q6B... 45 8e-04 UniRef50_C7Z1A1 Predicted protein n=1 Tax=Nectria haematococca m... 44 0.001 UniRef50_Q6CFD6 YALI0B08074p n=1 Tax=Yarrowia lipolytica RepID=Q... 44 0.001 UniRef50_O60091 60S ribosomal protein L24, mitochondrial n=1 Tax... 44 0.002 UniRef50_Q03W24 50S ribosomal protein L28 n=6 Tax=Leuconostocace... 44 0.002 UniRef50_A5DV86 Putative uncharacterized protein n=1 Tax=Loddero... 43 0.004 UniRef50_B1ZYG2 50S ribosomal protein L28 n=2 Tax=Verrucomicrobi... 42 0.007 UniRef50_UPI0001924E92 PREDICTED: similar to predicted protein n... 41 0.012 UniRef50_D2R413 Ribosomal protein L28 n=1 Tax=Pirellula staleyi ... 40 0.021 UniRef50_Q1J0Z7 50S ribosomal protein L28 n=4 Tax=Deinococcus Re... 40 0.028 UniRef50_C1XV04 LSU ribosomal protein L28P n=1 Tax=Meiothermus s... 40 0.029 UniRef50_C7LK22 50S ribosomal subunit protein L28 n=1 Tax=Candid... 39 0.032 UniRef50_A6DKH3 Ribosomal protein L28 n=1 Tax=Lentisphaera arane... 39 0.052 UniRef50_Q72G84 50S ribosomal protein L28 n=5 Tax=Deinococci Rep... 38 0.097 UniRef50_B8CWU5 50S ribosomal protein L28 n=9 Tax=Bacteria RepID... 38 0.099 >UniRef50_B1YV94 50S ribosomal protein L28 n=212 Tax=Bacteria RepID=RL28_BURA4 Length = 77 Score = 114 bits (287), Expect = 6e-25, Method: Composition-based stats. Identities = 56/76 (73%), Positives = 65/76 (85%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+RVCQVTGK P++GNN SHA N TKRRFLPNL + RFWVESE R+V LRVS G+R+ID Sbjct: 1 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLID 60 Query: 61 KKGIDTVLAELRARGE 76 K GID+VLA+LRARGE Sbjct: 61 KNGIDSVLADLRARGE 76 >UniRef50_C1DK04 50S ribosomal protein L28 n=56 Tax=Bacteria RepID=RL28_AZOVD Length = 78 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 66/77 (85%), Positives = 69/77 (89%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQVTGK PVTGNN SHA N T+RRFLPNL HRFWVESEKRFV LRVSAKGMR+ID Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIID 60 Query: 61 KKGIDTVLAELRARGEK 77 K+GID VLAELRARGEK Sbjct: 61 KRGIDVVLAELRARGEK 77 >UniRef50_A7ZTI8 50S ribosomal protein L28 n=178 Tax=Bacteria RepID=RL28_ECO24 Length = 78 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 78/78 (100%), Positives = 78/78 (100%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 KKGIDTVLAELRARGEKY 78 KKGIDTVLAELRARGEKY Sbjct: 61 KKGIDTVLAELRARGEKY 78 >UniRef50_Q07WG2 50S ribosomal protein L28 n=21 Tax=Bacteria RepID=RL28_SHEFN Length = 78 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 58/77 (75%), Positives = 69/77 (89%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQVTGK+P+ GNNRSHA N+T+RRFLPNL +HRFW+E EKRFV LRVS KG+R+ID Sbjct: 1 MSRVCQVTGKKPMVGNNRSHAKNSTRRRFLPNLQNHRFWLEEEKRFVQLRVSTKGIRIID 60 Query: 61 KKGIDTVLAELRARGEK 77 KKGI+ ++ ELRARGEK Sbjct: 61 KKGIEVIVKELRARGEK 77 >UniRef50_C5VHU0 Ribosomal protein L28-related protein n=9 Tax=Prevotella RepID=C5VHU0_9BACT Length = 87 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 50/75 (66%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS++CQ+TGK+ G N SH+ + TKR F NL S +F+ E ++ L++SA G+R+I+ Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFYYVEEACWIQLKISAAGLRLIN 60 Query: 61 KKGIDTVLAELRARG 75 K G+D L + ++G Sbjct: 61 KVGLDAALKQAVSKG 75 >UniRef50_Q5LCF5 50S ribosomal protein L28 n=30 Tax=Bacteroidetes RepID=RL28_BACFN Length = 86 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 51/75 (68%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS++CQ+TGK+ + GNN SH+ TKR F NL + +F+ + +++L + A G+R+I+ Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSLCAAGLRIIN 60 Query: 61 KKGIDTVLAELRARG 75 KKG+D L + A+G Sbjct: 61 KKGLDAALNDAVAKG 75 >UniRef50_A0K1X6 50S ribosomal protein L28 n=14 Tax=Bacteria RepID=RL28_ARTS2 Length = 78 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 53/78 (67%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+ CQVTG P G++ SH+ KRRF PN+ R+WV S +R VTL+VSA+G++ ID Sbjct: 1 MAAHCQVTGAEPGFGHSISHSHRRNKRRFDPNIQKKRYWVPSLRRNVTLQVSARGIKTID 60 Query: 61 KKGIDTVLAELRARGEKY 78 +GID V+A + ARG K Sbjct: 61 VRGIDVVVAAILARGVKL 78 >UniRef50_A9SGN8 Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SGN8_PHYPA Length = 129 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 38/70 (54%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 SR C +TGK+ G S + + TK PNL R W E KRFV LR+S K ++ I+K Sbjct: 53 SRRCDLTGKKANNGYKVSFSNHRTKHLQQPNLQYKRLWWEEGKRFVKLRISTKALKTIEK 112 Query: 62 KGIDTVLAEL 71 G+ + + Sbjct: 113 NGLQAMARKA 122 >UniRef50_B2RM15 50S ribosomal protein L28 n=12 Tax=Bacteria RepID=RL28_PORG3 Length = 79 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 48/75 (64%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS++CQ+TGK+ + GNN SH+ TKR F NL +F+ + +V LR+SA G+R+I+ Sbjct: 1 MSKICQITGKKAMVGNNVSHSKRRTKRVFDVNLFRKKFYWVEQDCWVVLRISAAGLRLIN 60 Query: 61 KKGIDTVLAELRARG 75 K G+D + +G Sbjct: 61 KIGLDAAIKRAAEKG 75 >UniRef50_B3ERW9 50S ribosomal protein L28 n=43 Tax=cellular organisms RepID=RL28_AMOA5 Length = 83 Score = 99 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 38/75 (50%), Positives = 49/75 (65%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+VC +TGKRP GN SHA N TKRRF PNL +F+V ++ LRVS +R I+ Sbjct: 1 MSKVCDITGKRPRVGNKVSHANNKTKRRFYPNLQFKKFYVPETNSWIVLRVSTSVIRTIN 60 Query: 61 KKGIDTVLAELRARG 75 KKGI V+ E + +G Sbjct: 61 KKGILEVIKEAQRKG 75 >UniRef50_C3PF15 50S ribosomal protein L28 n=36 Tax=Actinobacteridae RepID=RL28_CORA7 Length = 78 Score = 99.2 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 39/77 (50%), Positives = 57/77 (74%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS +CQVTG++P G SH+ T RR+ PN+ R+++ SE R +TL VS KGM++ID Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLTVSTKGMKIID 60 Query: 61 KKGIDTVLAELRARGEK 77 + GI++V+A++RARGEK Sbjct: 61 RDGIESVVAKIRARGEK 77 >UniRef50_UPI0001976DE4 ribosomal protein L28 n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976DE4 Length = 115 Score = 99.2 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 38/74 (51%), Positives = 48/74 (64%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+ CQ+ G R TGN SH+ T+RRF PNL + R+WV S R VTL VS KGM+ ID Sbjct: 18 MSKQCQILGTRASTGNRVSHSHRKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKGMKTID 77 Query: 61 KKGIDTVLAELRAR 74 + GI+ LA +R Sbjct: 78 RIGIEAALARIRRN 91 >UniRef50_A5CV85 50S ribosomal protein L28 n=78 Tax=Bacteria RepID=RL28_CLAM3 Length = 78 Score = 98.8 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 37/77 (48%), Positives = 53/77 (68%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+ CQVTG P G+N SH+ TKRRF PN+ ++V S +R V L +SAKG++VID Sbjct: 1 MAATCQVTGAVPGFGHNISHSHRRTKRRFDPNVQKKTYYVPSLRRNVKLTLSAKGIKVID 60 Query: 61 KKGIDTVLAELRARGEK 77 +GI++V+ ++ ARG K Sbjct: 61 ARGIESVVKDILARGVK 77 >UniRef50_Q83IB6 50S ribosomal protein L28 n=25 Tax=Bacteria RepID=RL28_TROW8 Length = 78 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 50/78 (64%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS VCQVTG P G SH+ TKRRF PN+ F+V + R VTL VS KG+R+ID Sbjct: 1 MSSVCQVTGASPGFGYAVSHSHRRTKRRFDPNVRRRTFYVATLGRRVTLNVSVKGLRLID 60 Query: 61 KKGIDTVLAELRARGEKY 78 K+GID V+ +L +G K Sbjct: 61 KRGIDAVVRDLIKKGVKL 78 >UniRef50_B0SXP0 50S ribosomal protein L28 n=26 Tax=Alphaproteobacteria RepID=RL28_CAUSK Length = 101 Score = 94.6 bits (234), Expect = 8e-19, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 3/79 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++TG P+ G+N SH+ TKRRFLP L +S + LR+S +R +D Sbjct: 1 MSRRCELTGIGPMVGHNVSHSNIKTKRRFLPALSPASLQSDSLGQTFKLRISNAALRTLD 60 Query: 61 -KKGIDTVLAELRARGEKY 78 + G+D L L A+ E+ Sbjct: 61 FRGGLDVFL--LGAKDEQL 77 >UniRef50_Q31S95 50S ribosomal protein L28 n=4 Tax=cellular organisms RepID=RL28_SYNE7 Length = 78 Score = 94.2 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 38/71 (53%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQ+TGK+ SH+ TKR NL R W RFV LR+S K ++ + Sbjct: 1 MSRVCQLTGKKANNAYAISHSHRRTKRLQNVNLQEKRIWWPEGNRFVKLRLSTKAIKTLQ 60 Query: 61 KKGIDTVLAEL 71 KKG+ EL Sbjct: 61 KKGLSAYAREL 71 >UniRef50_Q2S6K2 50S ribosomal protein L28 n=5 Tax=Bacteroidetes RepID=RL28_SALRD Length = 78 Score = 93.8 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 38/75 (50%), Positives = 50/75 (66%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R VTG+ PVTGN+ S + T RRF NLH RF++ SE R V L+VS+K ++ I+ Sbjct: 1 MARKDDVTGEGPVTGNSVSDSNQKTNRRFKRNLHEKRFYIPSEDRHVKLKVSSKTLKTIN 60 Query: 61 KKGIDTVLAELRARG 75 KKGI VL E R +G Sbjct: 61 KKGIQAVLEEARKQG 75 >UniRef50_Q8DG62 50S ribosomal protein L28 n=7 Tax=cellular organisms RepID=RL28_THEEB Length = 78 Score = 93.8 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 39/71 (54%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQ+TGK+ SH+ TK+ NL R W KR+V LR+S K ++ ++ Sbjct: 1 MSRVCQLTGKKANNAYAISHSHRRTKKLQQVNLQWKRVWWPEGKRWVRLRLSTKAIKTLE 60 Query: 61 KKGIDTVLAEL 71 +KG+ E Sbjct: 61 RKGLSAFAKEA 71 >UniRef50_A4YKZ2 50S ribosomal protein L28 n=74 Tax=Proteobacteria RepID=RL28_BRASO Length = 102 Score = 91.9 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++T K P G+ SH+ TKRRFLPNL + F ++ R V LRVS ++ +D Sbjct: 1 MSRRCELTAKGPQVGHKVSHSNIKTKRRFLPNLCNVTFISDALGRNVRLRVSTNAIKSVD 60 Query: 61 KK-GIDTVLAELRA 73 G+D L + A Sbjct: 61 HNGGLDAYLMKANA 74 >UniRef50_Q7VRK1 50S ribosomal protein L28 n=16 Tax=Bacteria RepID=RL28_BLOFL Length = 79 Score = 91.5 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 43/77 (55%), Positives = 63/77 (81%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR CQ+T K+P+ GN RSHA+NATKR F+PN+HSHRFW+E++K+F+ LR+S KG+R++D Sbjct: 1 MSRTCQITRKKPMNGNKRSHAMNATKRWFIPNIHSHRFWIENKKKFIKLRISTKGIRLVD 60 Query: 61 KKGIDTVLAELRARGEK 77 K GI+ L+ + + +K Sbjct: 61 KLGIEQFLSIVSFKNKK 77 >UniRef50_Q9FW34 Os05g0101400 protein n=10 Tax=cellular organisms RepID=Q9FW34_ORYSJ Length = 137 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 R+C T K+ N S + + TK++ NL + W E KRFV LR+S K ++ I+K Sbjct: 62 RICPFTDKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEEGKRFVKLRLSTKALKTIEKH 121 Query: 63 GIDTVLAEL 71 G+D V + Sbjct: 122 GLDAVAKKA 130 >UniRef50_O22795 50S ribosomal protein L28, chloroplastic n=33 Tax=cellular organisms RepID=RK28_ARATH Length = 143 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 39/69 (56%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 R+C TGK+ N S + + TK+ NL R W E+ KRFV LR+S K ++ I+K Sbjct: 68 RICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKN 127 Query: 63 GIDTVLAEL 71 G+D V + Sbjct: 128 GLDAVAKKA 136 >UniRef50_A9WKB7 Ribosomal protein L28 n=3 Tax=Chloroflexus RepID=A9WKB7_CHLAA Length = 84 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C +TG+ P G N S + T RR+LPN+ R WV E+RFV L++SA +R I+ Sbjct: 1 MSRRCDLTGRSPSFGYNVSFSKRRTNRRWLPNVQKRRIWVPEEQRFVRLKLSAAALREIE 60 Query: 61 KKGIDTVLAE 70 +KG+ L + Sbjct: 61 RKGLLQALRD 70 >UniRef50_P72851 50S ribosomal protein L28 n=28 Tax=cellular organisms RepID=RL28_SYNY3 Length = 78 Score = 90.7 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 38/71 (53%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R CQ+TGK+ G SH+ TK+ NL R W RFV LR+S ++ ++ Sbjct: 1 MARRCQLTGKKANNGFAVSHSHRRTKKLQQANLQWKRVWWPEGNRFVRLRLSTTAIKTLE 60 Query: 61 KKGIDTVLAEL 71 KGI+ + E Sbjct: 61 SKGINAMAKEA 71 >UniRef50_A5G211 50S ribosomal protein L28 n=45 Tax=Alphaproteobacteria RepID=RL28_ACICJ Length = 100 Score = 89.2 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R C +TGK ++GNN SHA N ++RRFLPNL ++ V LRV+ +G+ I+ Sbjct: 1 MTRRCDITGKSVLSGNNVSHANNKSRRRFLPNLQDSALQSDALGHSVKLRVTPRGLATIE 60 Query: 61 -KKGIDTVLAELRAR 74 K G+D L + R Sbjct: 61 QKGGLDAFLLDTPNR 75 >UniRef50_B1ZHJ4 50S ribosomal protein L28 n=55 Tax=cellular organisms RepID=RL28_METPB Length = 101 Score = 88.0 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++TGK G+ SH+ TK RFLPNL + ++ R V LRV+A +R ++ Sbjct: 1 MSRRCELTGKAVQVGHLVSHSNRKTKCRFLPNLCNVTLQSDALNRRVRLRVTAHALRSVE 60 Query: 61 -KKGIDTVLAELRA 73 + G+D L + R Sbjct: 61 HRGGLDAFLIKARE 74 >UniRef50_B0SEH0 50S ribosomal protein L28 n=6 Tax=Leptospira RepID=RL28_LEPBA Length = 96 Score = 85.3 bits (210), Expect = 5e-16, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 42/70 (60%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R C VTGK GNN SH+ +R + N+ + + ++E E R+V +++S + +R + Sbjct: 1 MARTCVVTGKGTTAGNNVSHSHKKNRRIWKVNVITKKIFLEDENRWVRVKISTRALRTLR 60 Query: 61 KKGIDTVLAE 70 KKG+ + + Sbjct: 61 KKGLKVAIKD 70 >UniRef50_Q6MDF9 50S ribosomal protein L28 n=14 Tax=Chlamydiales RepID=RL28_PARUW Length = 91 Score = 81.5 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 13/89 (14%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MS+VCQVTG++P G + TKRRF PNL R W E RF+ Sbjct: 1 MSKVCQVTGRKPTRGYKYAIRGIAKKKKGIGLKVTGKTKRRFQPNLFKKRIWFAEENRFI 60 Query: 48 TLRVSAKGMRVIDKKGIDTVLAELRARGE 76 TL++S +R ID+ G+ V+ ++RA G+ Sbjct: 61 TLKLSTAALRTIDRLGVFAVVRKMRANGQ 89 >UniRef50_P48129 50S ribosomal protein L28, cyanelle n=4 Tax=Eukaryota RepID=RK28_CYAPA Length = 70 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R C++TGK+ G SH+ TK NL + R W + KR++ L+VS K ++ + Sbjct: 1 MARQCELTGKKANNGYTVSHSHRRTKCLQKANLQTKRIWSPTLKRWLKLQVSTKVIKDLK 60 Query: 61 KKGIDTVLA 69 +K ID +L Sbjct: 61 RKSIDALLK 69 >UniRef50_Q3B2H1 50S ribosomal protein L28 n=9 Tax=Chlorobiaceae RepID=RL28_PELLD Length = 72 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 34/72 (47%), Positives = 48/72 (66%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+VC +TGKRP GN SHA N + RF PNLH+ R W++ EKR+ +++SAK M++I Sbjct: 1 MSKVCVLTGKRPKYGNTVSHANNHRRTRFEPNLHTKRIWIDEEKRWAKVKLSAKAMKIIA 60 Query: 61 KKGIDTVLAELR 72 K G + L+ Sbjct: 61 KTGTAELAKLLK 72 >UniRef50_Q1V0W3 50S ribosomal protein L28 n=5 Tax=Bacteria RepID=Q1V0W3_PELUB Length = 107 Score = 81.1 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 1/76 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+ C++TGK P+ G+N SHA N TKRRFLPNL +F E KR +TL VS G+R +D Sbjct: 1 MSKKCELTGKIPMKGHNVSHANNKTKRRFLPNLKKAKFTSELLKRSLTLTVSNAGVRSVD 60 Query: 61 KKG-IDTVLAELRARG 75 KKG D L ++ + Sbjct: 61 KKGTFDQFLKTVKNKN 76 >UniRef50_Q2GE85 50S ribosomal protein L28 n=2 Tax=Neorickettsia RepID=RL28_NEOSM Length = 102 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS C +TG GN SH+ TK+RF+PNL + + K+ +VSAK +R ID Sbjct: 1 MSNSCDLTGHGWQNGNMVSHSNRKTKKRFMPNLQRVTVFSDVLKQKFRFKVSAKTIRTID 60 Query: 61 -KKGIDTVLAELR 72 K G+D L + Sbjct: 61 FKGGLDDFLRNTK 73 >UniRef50_C1E354 Predicted protein n=2 Tax=Micromonas RepID=C1E354_9CHLO Length = 208 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 R C +TGK+ G S + K+ NL R + ++R+V LR+S M+ I+K Sbjct: 66 RKCMLTGKKANNGWTVSFSHIRNKKLQGVNLQYKRVYWPEKQRYVRLRISTSAMKSINKI 125 Query: 63 GIDTVLAEL 71 G++ + Sbjct: 126 GLEAMAKRA 134 >UniRef50_Q0SNG2 50S ribosomal protein L28 n=23 Tax=Borrelia RepID=RL28_BORAP Length = 92 Score = 77.2 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 13/83 (15%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 M+R C++TGK+ + GNN H TKR F NL + +F++ R + Sbjct: 1 MARKCEITGKKTMFGNNVPRKGLAKKKGGARQHIGVKTKRTFKVNLINKKFFIPDLGRSI 60 Query: 48 TLRVSAKGMRVIDKKGIDTVLAE 70 ++VSA +R I K G+D L + Sbjct: 61 NIKVSANALRSISKIGLDAFLKK 83 >UniRef50_A9F3L1 50S ribosomal protein L28 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3L1_SORC5 Length = 74 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M++ +TGKR + N SH+ TKR L N+ + R WV RFV L ++ + +R ID Sbjct: 1 MAKS-DITGKRKLLAQNVSHSNIKTKRWQLVNIQTRRVWVPELNRFVKLNLTTRDIRTID 59 Query: 61 KKGIDTVLAE 70 K G+ Sbjct: 60 KIGVVAYAKR 69 >UniRef50_Q73HZ5 50S ribosomal protein L28 n=18 Tax=Rickettsiales RepID=RL28_WOLPM Length = 104 Score = 76.5 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVC++T ++ GN SH+ TKR FL NLH + + RV+ + +R ID Sbjct: 1 MSRVCELTNRKKSFGNKVSHSNRKTKRTFLLNLHKVTLTSDILNKKFRFRVATRTLRTID 60 Query: 61 KKG-IDTVLAELRA 73 KG +D L R Sbjct: 61 YKGDLDAFLLNTRT 74 >UniRef50_A8GM58 50S ribosomal protein L28 n=15 Tax=Rickettsia RepID=RL28_RICAH Length = 97 Score = 75.3 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++TG + GNN SH+ T+RRF PNL S +F + L V+A+ + ++ Sbjct: 1 MSRKCELTGVGVLYGNNVSHSQRKTRRRFEPNLRSVKFTSDITAGKYRLSVNARCISSVE 60 Query: 61 K-KGIDTVLAEL 71 K G D + + Sbjct: 61 KAGGFDAYILQA 72 >UniRef50_UPI00016B25B5 hypothetical protein cdiviTM7_00351 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B5 Length = 68 Score = 74.9 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+ C +TGK GNN S +L TKR F PNL F V+ + +T+ +S + +R + Sbjct: 1 MASRCDLTGKGKQYGNNVSFSLRRTKRVFKPNLQKKTFVVD--GQKITMTLSTQAIRTLK 58 Query: 61 KKGI 64 KKGI Sbjct: 59 KKGI 62 >UniRef50_A5UQX0 Ribosomal protein L28 n=4 Tax=Roseiflexus RepID=A5UQX0_ROSS1 Length = 91 Score = 74.5 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Query: 1 MSRVCQVTGKRPVTGNNRSHALN--------ATKRRFLPNLHSHRFWVESEKRFVTLRVS 52 M+R C +TGK+ G N H + T R F PN+H H +V R +TL +S Sbjct: 1 MAR-CDLTGKKVAFGRNIRHKASGGWARRAPKTNRTFRPNVHRHTIYVPEIGRSITLNLS 59 Query: 53 AKGMRVIDKKGIDTVLAE 70 K +R I+KKG+ + + Sbjct: 60 TKALRTINKKGLIAAVRD 77 >UniRef50_A8FKN5 50S ribosomal protein L28 n=47 Tax=Epsilonproteobacteria RepID=RL28_CAMJ8 Length = 64 Score = 72.2 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+RVCQ+TGK P+ GNN SHA N TKRRFLPNL + R +E +R++A +R + Sbjct: 1 MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLED-GTTRKMRIAASTLRTLK 59 Query: 61 KKG 63 K+ Sbjct: 60 KQN 62 >UniRef50_A0L5U1 50S ribosomal protein L28 n=1 Tax=Magnetococcus sp. MC-1 RepID=RL28_MAGSM Length = 95 Score = 71.4 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R + GK P GN SH+ T+R+++PN+ + W + + V + +S +R +D Sbjct: 1 MARKRTLGGKAPQAGNKVSHSQRKTRRQWMPNIQTKALWSITLGQSVKVTISTSALRSVD 60 Query: 61 K-KGIDTVLAELRA 73 G+D L ++ Sbjct: 61 NAGGLDNYLLKILP 74 >UniRef50_C6BYE0 50S ribosomal protein L28 n=47 Tax=Bacteria RepID=RL28_DESAD Length = 70 Score = 71.1 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MS+VC + GK P TGNN SHA N TKRRF+PNL R + S + +++ + +R Sbjct: 1 MSQVCDICGKGPQTGNNVSHAHNKTKRRFMPNLQKVRTQLPSGEVK-SIKACTRCIRS 57 >UniRef50_A5IXN6 50S ribosomal protein L28 n=8 Tax=Bacteria RepID=RL28_MYCAP Length = 68 Score = 69.5 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R Q+ GK P+ GN RSH++ ATKR+F NL S TLRVSAK ++ + Sbjct: 1 MARRDQLNGKGPLVGNLRSHSMIATKRKFNVNLQKITI-ANSNGTPTTLRVSAKTIKTLK 59 Query: 61 KKGI 64 +KGI Sbjct: 60 RKGI 63 >UniRef50_B2URC9 50S ribosomal protein L28 n=4 Tax=Verrucomicrobia RepID=RL28_AKKM8 Length = 87 Score = 69.1 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 13/84 (15%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 MSR+C + G P G H R PNL R WV +FV Sbjct: 1 MSRICIIRGTMPHKGRRIHRSGLAKKKGGIGRHVTKTVNRTVFPNLQEKRIWVPELGQFV 60 Query: 48 TLRVSAKGMRVIDKKGIDTVLAEL 71 +++SAK +R I+K G L ++ Sbjct: 61 KMKISAKALRTINKNGAYNTLKKV 84 >UniRef50_C0QM36 50S ribosomal protein L28 n=5 Tax=Bacteria RepID=RL28_DESAH Length = 74 Score = 68.8 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 32/53 (60%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSA 53 MS+ C++ GK+P+ GNN SHA N KRRF PNL + + + R + + S Sbjct: 1 MSKECKICGKKPMVGNNVSHAHNVNKRRFNPNLQRVKALFDGQVRRIDVCTSC 53 >UniRef50_D2UXL8 Predicted protein (Fragment) n=1 Tax=Naegleria gruberi RepID=D2UXL8_NAEGR Length = 87 Score = 68.8 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 3/69 (4%) Query: 13 VTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAEL 71 TGN RS + TKR+++PN H + + E+ V LR ++K +R IDK G+D L E Sbjct: 14 QTGNQRSFSERKTKRKWMPNSHWVKLYSEALDTRVQLRATSKALRCIDKSGGLDNYLIET 73 Query: 72 RAR--GEKY 78 R G +Y Sbjct: 74 RPELVGSRY 82 >UniRef50_P0A5V7 50S ribosomal protein L28-1 n=21 Tax=Corynebacterineae RepID=RL28A_MYCBO Length = 94 Score = 68.0 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 38/59 (64%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVI 59 MS CQ+TG+ G SH+ T+RR+ PN+ +++ SE R + +RVSA+G++VI Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVI 59 >UniRef50_A8P0U6 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8P0U6_COPC7 Length = 192 Score = 68.0 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTV 67 GK GNN + + T+R +LPN+ R E V ++V+ + +R I K G+D Sbjct: 25 GKSIQYGNNVPFSKHKTRRTWLPNVQRKRLDSEVLGEKVRIKVTTRALRTIKKYGGLDNY 84 Query: 68 LAELRA 73 L ++ Sbjct: 85 LKGTQS 90 >UniRef50_O77465 Large ribosomal protein L28 n=5 Tax=Toxoplasma gondii RepID=O77465_TOXGO Length = 272 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 2 SRVCQVTGKRPVT-GNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 +R C + GK T NRSH+ AT + NLH R W +V LR+S KG+R I Sbjct: 144 ARRCMLLGKMDNTKARNRSHSRVATHKVQRLNLHWKRLWWPEAGYYVRLRLSVKGIRTIK 203 Query: 61 KKGID 65 K G+ Sbjct: 204 KYGLQ 208 >UniRef50_Q2GMW6 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2GMW6_CHAGB Length = 254 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 14 TGNNRSHALN-ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVL 68 GNN S N T+R++ PN+H R W S FV RV+A+ +R +DK G+D L Sbjct: 87 FGNNVSERNNIKTRRQWRPNVHHKRLWSASLGVFVRTRVTARVLRTVDKAGGLDEYL 143 >UniRef50_D1ZU12 Whole genome shotgun sequence assembly, scaffold_114 n=1 Tax=Sordaria macrospora RepID=D1ZU12_SORMA Length = 266 Score = 65.7 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 14 TGNNRSHAL-NATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVL 68 GNN S T+R++ PN+ R W +S FV RV+ + +R IDK G+D L Sbjct: 98 FGNNVSKRNEIKTRRKWRPNVQQKRLWSKSLGVFVRTRVTTRVLRTIDKVGGLDEYL 154 >UniRef50_B1AIJ7 50S ribosomal protein L28 n=24 Tax=Bacteria RepID=RL28_UREP2 Length = 64 Score = 65.7 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M++ Q+TGK P++GN RSHA+N +KRR+ NL ++E + VSAK ++ + Sbjct: 1 MAKRDQLTGKGPLSGNTRSHAMNHSKRRWNVNLQKATI--KTENGSQRVLVSAKTLKTLK 58 Query: 61 KKGIDT 66 K + Sbjct: 59 KHNLLA 64 >UniRef50_A6SKT3 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6SKT3_BOTFB Length = 233 Score = 65.7 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 11 RPVTGNNRSHAL-NATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVL 68 + GN S T+R + PN+ R + S R + LRV+ K +R IDK G+D L Sbjct: 64 KIRYGNIVSEKNEIKTRRHWRPNVQRKRLYSPSLGRQIKLRVTTKVLRTIDKAGGLDEYL 123 Query: 69 AELRARGEK 77 + + K Sbjct: 124 LGEKTQRIK 132 >UniRef50_D2MQH7 Ribosomal protein L28 n=1 Tax=Bulleidia extructa W1219 RepID=D2MQH7_9FIRM Length = 67 Score = 65.3 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 2/60 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVC V+GK+ + GN RSH+L AT+R++ NL V+ + + TLR+SA+ ++ + Sbjct: 1 MSRVCTVSGKKALYGNKRSHSLRATRRKWNVNLQKVHMIVDGKPQ--TLRISARALKTLK 58 >UniRef50_Q4UF36 50s ribosomal subunit protein L28, putative n=3 Tax=Piroplasmida RepID=Q4UF36_THEAN Length = 429 Score = 65.3 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 3 RVCQVTGKRPVT-GNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 R C + GK T SH+ T++ NLH + W K F+ LR+S +G++ I + Sbjct: 101 RRCMLLGKMDNTKAMQISHSGVKTRKTQKLNLHWKKIWHPLRKYFIRLRISMRGLKTIKR 160 Query: 62 KGIDTVLAE 70 GI Sbjct: 161 LGIVEAARR 169 >UniRef50_B9L2A7 50S ribosomal protein L28 n=4 Tax=Chloroflexi RepID=RL28_THERP Length = 63 Score = 65.3 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 5 CQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKGI 64 C++ GK+P+ G+N SH+ T R+F PN+ + + +R+ + +R + K+ Sbjct: 4 CELCGKKPMFGHNVSHSNRKTNRKFKPNVQRVTVILNGVPK--RMRICTRCLRTLYKEAR 61 Query: 65 DT 66 + Sbjct: 62 EA 63 >UniRef50_Q6B8P2 50S ribosomal protein L28, chloroplastic n=1 Tax=Gracilaria tenuistipitata var. liui RepID=RK28_GRATL Length = 64 Score = 65.3 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M + C +TGK+ G SH+ TK+ NL + + W + +KR++ +++ K ++ + Sbjct: 1 MVKECTLTGKKSNNGYTVSHSHIRTKKIQHINLQTKKIWSDKQKRWIKIKICTKAIKSLH 60 Query: 61 K 61 K Sbjct: 61 K 61 >UniRef50_C5J7C0 50S ribosomal protein L28 n=2 Tax=Mycoplasma RepID=C5J7C0_MYCCR Length = 64 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R +T K P++GNNRSHALNATKR+F NL S + + L+VSAK + + Sbjct: 1 MARRDDLTFKGPLSGNNRSHALNATKRKFNLNLQKVVITTSS-GQKIKLKVSAKTKKTLR 59 Query: 61 KKG 63 K+G Sbjct: 60 KQG 62 >UniRef50_Q1AW97 50S ribosomal protein L28 n=97 Tax=Bacteria RepID=RL28_RUBXD Length = 71 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M++VC GK P GN RSH+L AT+RR+ PNL R + V A ++ Sbjct: 1 MAKVCYSCGKGPSFGNARSHSLRATRRRWNPNLQKVRI--REGGATKRVWVCASCLK 55 >UniRef50_B2ACV6 Predicted CDS Pa_3_11310 n=3 Tax=Eukaryota RepID=B2ACV6_PODAN Length = 366 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 14 TGNNRSHAL-NATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVLAEL 71 GNN S T+R + PN+H R + S + +V R++ + +R IDK G+D L + Sbjct: 164 YGNNVSEKNEIKTRRTWRPNVHRKRLFSLSLRTWVQTRLTTRVLRTIDKVGGLDEYLLGI 223 Query: 72 RARGEK 77 + K Sbjct: 224 KPNRIK 229 >UniRef50_C5E271 KLTH0H02618p n=3 Tax=Saccharomycetaceae RepID=C5E271_LACTC Length = 273 Score = 63.0 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Query: 13 VTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAE 70 GNN + + T+RR+LPN+ W E+ R V++R++AK +R + K+ GID L + Sbjct: 95 QYGNNVAESKTKTRRRWLPNVIKKGLWSEALSRNVSIRMTAKVLRTVTKEGGIDNYLTK 153 >UniRef50_D0LC20 Ribosomal protein L28 n=4 Tax=Actinobacteria (class) RepID=D0LC20_GORB4 Length = 63 Score = 63.0 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+ VC + GK P G + SH+ T RR+ PN+ S R V R V ++ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTNRRWNPNIQSVRVEVAPGNRKRK-NVCTSCLK 56 >UniRef50_A0D2P9 Chromosome undetermined scaffold_35, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0D2P9_PARTE Length = 289 Score = 63.0 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+ C GK+P +GN + T+R ++PN+ + R + ++V+AK M+ I Sbjct: 58 MSQFCLWHGKQPKSGNQTCFSEKKTRRSWMPNVQKQTYESLILGRRIHVKVTAKTMKCIR 117 Query: 61 KKG-IDTVLAELRARG 75 K G D + + + Sbjct: 118 KAGSFDNYILLTKPQD 133 >UniRef50_A4RWI5 Putative mitochondrial ribosomal protein L28 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RWI5_OSTLU Length = 125 Score = 63.0 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Query: 2 SRVCQVTGKRPVTGNNRS-HALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 +R GK GNN S N T+RR+LPN R + E + + +RV+A +R +D Sbjct: 21 ARRGLFAGKHIKFGNNVSEDGGNKTRRRWLPNAQKKRVYSELLEEMIPMRVTAHALRCMD 80 Query: 61 K-KGIDTVLAELRARGEK 77 K G+D + R + K Sbjct: 81 KAGGLDEYILRTRDQDLK 98 >UniRef50_A7HDC0 50S ribosomal protein L28 n=18 Tax=Bacteria RepID=RL28_ANADF Length = 73 Score = 62.6 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+R C + GK P+ GNN SHA N +K R LPNL S R V+ + V RV + ++ Sbjct: 1 MARRCDICGKGPLVGNNVSHANNKSKTRSLPNLRSVRATVDGTVKHV--RVCTRCLK 55 >UniRef50_C7QYT4 Ribosomal protein L28 n=5 Tax=Bacteria RepID=C7QYT4_JONDD Length = 63 Score = 62.2 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+ +C V K P G++ SH+ TKRR+ PN+ R V + L V ++ Sbjct: 1 MAAICDVCAKGPSFGHSISHSHVRTKRRWNPNIQRVRAIVNGAPK--RLNVCTSCLK 55 >UniRef50_Q9ZBR5 50S ribosomal protein L28-1 n=10 Tax=Actinobacteria (class) RepID=RL28A_STRCO Length = 61 Score = 62.2 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 25/53 (47%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSA 53 M+ C V GK P GNN SH+ T RR+ PN+ R V + V S Sbjct: 1 MAANCDVCGKGPGFGNNISHSHRRTSRRWNPNIQRVRTVVSGTPKRVNACTSC 53 >UniRef50_D1AWU8 Ribosomal protein L28 n=2 Tax=Fusobacteriaceae RepID=D1AWU8_STRM9 Length = 87 Score = 61.8 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 ++C+V GK+ GN SH+ ATKR + PNL + + ++ + V +RVS K M+ + K Sbjct: 2 QICEVFGKKVGHGNLVSHSNRATKRIWRPNLQTMKLMLD--GKEVKVRVSTKAMKTLKGK 59 Query: 63 GIDTVLAELRAR 74 D V L Sbjct: 60 NEDQVKKILLEN 71 >UniRef50_A8F7S8 50S ribosomal protein L28 n=8 Tax=Bacteria RepID=RL28_THELT Length = 65 Score = 61.4 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M++ C++ GK PV G N SH+ T+R F PNL R + + T+RV + ++ Sbjct: 1 MAKRCEICGKGPVAGKNVSHSNRHTRRMFRPNLQKIRV-ITEDGTVRTMRVCTRCLK 56 >UniRef50_D1R4Y7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4Y7_9CHLA Length = 94 Score = 61.4 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 16/90 (17%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MS+VC VTGK+ G + TKRRF NL + W+ E RFV Sbjct: 1 MSKVCPVTGKKTTRGFKYAIRGIAKKKKGIGLKVTGKTKRRFKANLADRKLWLAEENRFV 60 Query: 48 TL-RVSAKGMRVIDKK--GIDTVLAELRAR 74 ++ +S G+R ++KK G+ + ++R++ Sbjct: 61 SIPNLSISGLRTLEKKEGGVAAYVRQVRSQ 90 >UniRef50_Q2SS02 50S ribosomal protein L28 n=20 Tax=Bacteria RepID=RL28_MYCCT Length = 65 Score = 61.0 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R +TGK ++G +RSHALNATKR++ NL R + ++VSA+ +R + Sbjct: 1 MARRDALTGKSALSGQSRSHALNATKRKWNLNLQKVRVM-DENGSVFNIKVSARTLRTLK 59 Query: 61 KK 62 K+ Sbjct: 60 KQ 61 >UniRef50_B7FY86 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FY86_PHATR Length = 89 Score = 60.7 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 SR GK TGNN S ++ ATKR F PN+ R + E V ++ +R IDK Sbjct: 15 SRRGLYDGKDVRTGNNVSFSMRATKRTFKPNVMIKRVYSEILDEMVKFHLTTSTLRSIDK 74 Query: 62 -KGIDTVLAE 70 G+D L + Sbjct: 75 AGGLDNYLLK 84 >UniRef50_B9Y7G9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7G9_9FIRM Length = 64 Score = 60.7 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 42/60 (70%), Gaps = 2/60 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVC V+GK+ ++GN RSH+L+A++R++ NL + V+ + + +R+SA+ ++ + Sbjct: 1 MSRVCAVSGKKALSGNKRSHSLHASRRKWNVNLQKVKVMVDGKPQ--RIRISARALKTLK 58 >UniRef50_D0N116 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0N116_PHYIN Length = 119 Score = 60.7 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTV 67 G+ GNN S + T+R + N + E+ V L V+ +R +DK G+D Sbjct: 32 GRDKAFGNNVSFSKRRTRRAWKVNHQWKSLYSEALDEKVGLNVTTHTLRCVDKIGGLDNY 91 Query: 68 LAELRARGE 76 L ++ E Sbjct: 92 LLSIKDERE 100 >UniRef50_Q4Z7B7 50S ribosomal subunit protein L28, putative (Fragment) n=1 Tax=Plasmodium berghei RepID=Q4Z7B7_PLABE Length = 215 Score = 60.7 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 2 SRVCQVTGKRPV-TGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 +R C + GK S + T R N R + E E RFV LRVSA+G++ I Sbjct: 85 ARRCPILGKMDNRNARKISKSGIKTHRIQKVNFVRKRIYFEEENRFVKLRVSARGLKTIK 144 Query: 61 KKGI 64 K G+ Sbjct: 145 KYGL 148 >UniRef50_Q4PE47 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4PE47_USTMA Length = 157 Score = 60.7 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTV 67 GK +G+N + T R + PN+ S + W + RFV +VS +R +DK G+D Sbjct: 60 GKMIQSGHNVPKSRQKTARTWSPNIQSKKLWSNTLDRFVRAKVSTSALRSMDKMGGLDIY 119 Query: 68 LAELRAR 74 LA+ + Sbjct: 120 LAKTSSE 126 >UniRef50_C9SFC9 54S ribosomal protein L24 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SFC9_VERA1 Length = 259 Score = 60.3 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Query: 14 TGNNRSHALN-ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAE 70 GNN S T R + PN+H R W + +V R+S + +R I K+ G+D + + Sbjct: 80 RGNNISSDHKVKTPRAWRPNIHRKRLWSAALGVWVRARLSLRVLRTIRKEGGLDAYVLK 138 >UniRef50_B1L9P8 50S ribosomal protein L28 n=64 Tax=Bacteria RepID=RL28_THESQ Length = 70 Score = 59.9 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 M++ C+V GK P +GN SH+ + R F PNL R + +RV ++ Sbjct: 1 MAKRCEVCGKAPRSGNTVSHSDKKSGRWFRPNLQKVRVVLPD-GTIKRMRVCTSCLKS 57 >UniRef50_A1CI14 50S ribosomal protein L24 n=8 Tax=Eurotiomycetidae RepID=A1CI14_ASPCL Length = 212 Score = 59.9 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 9 GKRPVTGNNRSHALN--ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GID 65 G GN S N T+R + PN+ + W E+ F+ ++V+ K +R I K G+D Sbjct: 69 GAMIQFGNKISKGRNEGKTRRSWKPNVRRKKLWSEALGEFLFIKVTRKALRTIWKSGGLD 128 Query: 66 TVLAELRA 73 L + R Sbjct: 129 NYLLDDRP 136 >UniRef50_A2RHS3 50S ribosomal protein L28 n=266 Tax=Bacteria RepID=RL28_LACLM Length = 64 Score = 59.9 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVI 59 MS+ C TG++ V+ NNRSHA+N TKR PNL E + T+ SAK ++ + Sbjct: 1 MSKECYFTGRKTVSSNNRSHAMNQTKRVVKPNLQKVTILENGELK--TVWASAKALKKL 57 >UniRef50_B0D7Z1 Predicted protein n=2 Tax=Agaricomycetes RepID=B0D7Z1_LACBS Length = 192 Score = 59.5 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTV 67 GK GNN + + ++R +LPN+ R + + ++++ + ++ I K G+D Sbjct: 28 GKNKQYGNNVPFSKHKSRRTWLPNVQQKRIPSATLGMPIRVKLTTRALKTIKKHGGLDKY 87 Query: 68 LAELRA 73 + + A Sbjct: 88 VEKTPA 93 >UniRef50_P36525 54S ribosomal protein L24, mitochondrial n=9 Tax=Saccharomycetaceae RepID=RM24_YEAST Length = 258 Score = 59.5 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTV 67 G GNN S + T++++LPN+ W E+ R ++++++AK ++ I K+ GID Sbjct: 76 GSFVQFGNNISESKAKTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNY 135 Query: 68 LAE 70 L + Sbjct: 136 LTK 138 >UniRef50_C0H4C3 Organelle ribosomal protein L28, putative n=6 Tax=Plasmodium RepID=C0H4C3_PLAF7 Length = 262 Score = 59.5 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 3 RVCQVTGKRPV-TGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 R C + GK S + T R NL + R + E E RF+ ++VSAKG++ I K Sbjct: 128 RRCAILGKMDNWNARKISKSGVRTHRIQRLNLINKRIFFEEENRFIKMKVSAKGLKTIKK 187 Query: 62 KGIDTVLAE 70 G+ + + Sbjct: 188 YGLAYCIKK 196 >UniRef50_C6D4E7 Ribosomal protein L28 n=4 Tax=Firmicutes RepID=C6D4E7_PAESJ Length = 62 Score = 58.7 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MSR C +TGK P TGN+ SHA N +R + N+ R V+ + + + VS + ++ Sbjct: 1 MSRKCFITGKSPGTGNHVSHANNKNRRSWGVNVQKVRILVDGKPK--RVYVSTRALKS 56 >UniRef50_Q7RFP1 Ribosomal protein L28, putative n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RFP1_PLAYO Length = 174 Score = 58.7 bits (141), Expect = 6e-08, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 2 SRVCQVTGKRPV-TGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 +R C + GK S + T + N R + E E RFV LRVSA+G++ I Sbjct: 34 ARRCPILGKMDNRNARKISKSGIKTHKIQRVNFVRKRIYFEEEDRFVKLRVSARGLKTIK 93 Query: 61 KKGI 64 K G+ Sbjct: 94 KYGL 97 >UniRef50_B8LKU8 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LKU8_PICSI Length = 222 Score = 58.7 bits (141), Expect = 6e-08, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 9 GKRPVTGNNRS-HALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG-IDT 66 G+ GNN S N T+R + PN+ R + R++ ++V+ +R IDK G ID Sbjct: 50 GRHIQFGNNISEDGGNKTRRTWKPNVQEKRLFSLILDRYIRIKVTTHTLRCIDKAGCIDD 109 Query: 67 VLAEL 71 L ++ Sbjct: 110 YLLQM 114 >UniRef50_Q8RDR9 50S ribosomal protein L28 n=10 Tax=Fusobacterium RepID=RL28_FUSNN Length = 85 Score = 57.2 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 + C++TG ++GN SH+ T+R + PNL V + ++V A+ ++ + Sbjct: 2 QRCEITGTGLISGNQISHSHRLTRRVWKPNLQVTTLVVN--GSPIKVKVCARTLKTLK 57 >UniRef50_C7ND19 Ribosomal protein L28 n=4 Tax=Bacteria RepID=C7ND19_LEPBD Length = 85 Score = 57.2 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 + C+V GK GN SH+ ATKR + PNL + + +E+ V +RV K M+ + K Sbjct: 2 QRCEVFGKTVSHGNRVSHSHRATKRIWRPNLQTMLLTINNEE--VRVRVCTKAMKTLKGK 59 Query: 63 GIDTVLAELRARGEKY 78 +D V L E Sbjct: 60 NVDQVKKILLKNKETL 75 >UniRef50_Q01CK5 50S ribosomal protein L28 (ISS) n=2 Tax=Eukaryota RepID=Q01CK5_OSTTA Length = 290 Score = 57.2 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 24/95 (25%) Query: 1 MS-RVCQVTGKRPVTGNNRSHALNATKRRFLPNLH-------------------SHRFWV 40 MS R C +TGK+ G S + K NL R + Sbjct: 90 MSGRKCMLTGKKANNGRTISFSHIRNKTLQQVNLQVRTRGESDGSLGRVARDFRRERLTL 149 Query: 41 E----SEKRFVTLRVSAKGMRVIDKKGIDTVLAEL 71 + R+V LR+S ++ ++K G++ + Sbjct: 150 TTCFRTIARYVRLRISTNAIKTLNKLGLEEMAKRA 184 >UniRef50_B2KAU3 50S ribosomal protein L28 n=4 Tax=Bacteria RepID=RL28_ELUMP Length = 64 Score = 56.8 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MS CQ+ GK VTG + SH+ TKR F PNL + + E + T V K ++ Sbjct: 1 MSYKCQLCGKGSVTGGSYSHSHRNTKRTFRPNLQKQKVVL--EGKTQTAYVCTKCIKS 56 >UniRef50_B5YHT7 Ribosomal protein L28 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHT7_THEYD Length = 62 Score = 56.8 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 5 CQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 C V GK+ V GNN SHA N TKR F PNL + E + + V + +R Sbjct: 4 CYVCGKKKVIGNNVSHANNKTKRYFFPNLQRMKIITERGPQ--RVHVCTRCLRS 55 >UniRef50_B5YNJ8 RK28, ribosomal protein 28, 50S large ribosomal subunit, chloroplast (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YNJ8_THAPS Length = 77 Score = 56.4 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 3 RVCQVTGKRPVT-GNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 R C + GK + + + NL RF+ + R V LR+S KG++ ++K Sbjct: 1 RACDLLGKTANRKARVVTFSHKRIHKVQQVNLQWKRFYSDDLGRQVRLRLSTKGIKTVNK 60 Query: 62 KG-IDTVLAE 70 G ID + Sbjct: 61 YGSIDAAAKK 70 >UniRef50_D0WND3 Conserved domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WND3_9ACTO Length = 97 Score = 56.0 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSA 53 + VC++ GK P G SH+ T RR+ PN+ R V ++ V + S Sbjct: 34 ASVCEICGKHPSFGKRVSHSHVRTSRRWNPNIQRVRALVNGARKRVNVCTSC 85 >UniRef50_A5FQ75 LSU ribosomal protein L28P n=5 Tax=Dehalococcoides RepID=A5FQ75_DEHSB Length = 62 Score = 55.7 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 4 VCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 C++ GK P G+N SH+ T R ++PN+HS + V V +++ + +R K Sbjct: 2 KCEMCGKTPSFGHNVSHSKRRTNRMWMPNIHSAKIAVN--GTEVRMKLCTRCIRTQAK 57 >UniRef50_A2QJ62 Contig An04c0180, complete genome n=8 Tax=Eurotiomycetidae RepID=A2QJ62_ASPNC Length = 299 Score = 55.7 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 9 GKRPVTGNNRSHALN--ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGID 65 G GN S N T+R + PN+ + + E+ + ++V+ K +R I K G+D Sbjct: 156 GAMIQFGNKISQGRNEGKTRRFWKPNVRRKKLYSEALGEDLFIKVTRKALRTIRKAGGLD 215 Query: 66 TVLAELRA 73 L R Sbjct: 216 NYLLSDRP 223 >UniRef50_B2S2V9 50S ribosomal protein L28 n=4 Tax=Treponema RepID=RL28_TREPS Length = 78 Score = 55.3 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 M+R C + GK ++G S +++ KR + PNL + R V+ + +R+ A+ +R Sbjct: 1 MARRCGLCGKGTISGCAVSKSMHHCKRVWKPNLLAVRVVVD--GSALNMRICARCLRS 56 >UniRef50_B5Y795 50S ribosomal protein L28 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=RL28_COPPD Length = 63 Score = 55.3 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+RVC V GK G+N SH+ T RR++ NL K T V K ++ Sbjct: 1 MARVCSVCGKGTTFGHNVSHSNRRTNRRWVANLKRVHGRFPDGKVR-TAYVCVKCLK 56 >UniRef50_B1C5T0 Putative uncharacterized protein (Fragment) n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5T0_9FIRM Length = 63 Score = 55.3 bits (132), Expect = 7e-07, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 21/38 (55%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRF 38 M + C V GK+ +G+ SH+ TKR + PNL R Sbjct: 18 MPKECYVCGKKITSGHQVSHSNIHTKRTWKPNLKKVRI 55 >UniRef50_C4QZ93 54S ribosomal protein L24, mitochondrial n=1 Tax=Pichia pastoris GS115 RepID=C4QZ93_PICPG Length = 248 Score = 54.9 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 13 VTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAE 70 GN S N R++ N+H+ W E + + ++++A+ +R I+K+ G+D L + Sbjct: 77 QFGNKISEFKNKNGRKWSLNVHTKSLWSEILNKSIRVKLTARVLRTINKEGGLDQYLLK 135 >UniRef50_B9E1F2 50S ribosomal protein L28 n=22 Tax=Clostridia RepID=RL28_CLOK1 Length = 63 Score = 54.9 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MS+ C++ GK V G SH+ +KR + PN+ + V+ R T+ V A+ +R Sbjct: 1 MSKKCEICGKGVVFGVQYSHSHRQSKRTWSPNIRKIKAIVKGTPR--TIHVCARCLRS 56 >UniRef50_UPI000150AA2C ribosomal protein L28 containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI000150AA2C Length = 289 Score = 54.5 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTV 67 GK+P TG + + R + N+H W + ++ + +++S+K +R IDK G D Sbjct: 67 GKQPKTGLQTCFSEKKSIRWWKVNVHEKYLWSDILQKKIRIQMSSKTLRTIDKYGGFDNY 126 Query: 68 LAELRARG 75 + + + Sbjct: 127 VLLTKPKN 134 >UniRef50_Q54TR3 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54TR3_DICDI Length = 142 Score = 54.5 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG-IDTV 67 GK + + S + T+R + PN+ + + + + + ++ +R IDK G D Sbjct: 27 GKDIIFSDQSSFSTRKTRRTWKPNVQTKTYHSDVLDSNIRVSLTTYTIRCIDKAGSFDNY 86 Query: 68 LAELRARG 75 + + + Sbjct: 87 IIHTKDKD 94 >UniRef50_A7S0T2 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7S0T2_NEMVE Length = 113 Score = 54.1 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTV 67 GK + G+ + + TKR + PN+H +++ E ++ ++ + MR IDK G D Sbjct: 25 GKGIMFGHVETFSGKKTKRAWKPNVHRKKYYSEVLEKNLSYNFTTHAMRCIDKAGGFDNY 84 Query: 68 LAELRA 73 + + Sbjct: 85 ILNTKD 90 >UniRef50_B0S150 50S ribosomal protein L28 n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=RL28_FINM2 Length = 71 Score = 54.1 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MS+ C++ GK GNNRS +L ++ R + PN+ R V+ + + + V + +R Sbjct: 1 MSKKCEICGKSRTFGNNRSFSLRSSNRSWAPNIRKVRALVDGKPK--RINVCTRCLRS 56 >UniRef50_C0S6I5 50S ribosomal protein L24 n=3 Tax=Paracoccidioides brasiliensis RepID=C0S6I5_PARBP Length = 203 Score = 54.1 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Query: 9 GKRPVTGNNRSHALNA--TKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGID 65 G GN S N T+R + PN+ + E+ + L+V+ + +R I K G+D Sbjct: 73 GSTIQFGNKISKGRNKGKTRRTWKPNVRHEELYSEALGTTLKLKVTHRVLRTIKKVGGLD 132 Query: 66 TVL 68 L Sbjct: 133 QYL 135 >UniRef50_Q85G82 50S ribosomal protein L28, chloroplastic n=1 Tax=Cyanidioschyzon merolae RepID=RK28_CYAME Length = 75 Score = 54.1 bits (129), Expect = 2e-06, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVC +T K+ +++ RR NL R ++ +E +V L++S K ++ + Sbjct: 1 MSRVCPLTLKKCNHAFRVTYSHKRNHRRQFVNLQKKRIFINNE--WVVLKISTKAIKTLK 58 Query: 61 KKGIDT 66 K + + Sbjct: 59 SKTLKS 64 >UniRef50_P75171 50S ribosomal protein L28 n=1 Tax=Mycoplasma pneumoniae RepID=RL28_MYCPN Length = 65 Score = 53.3 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M++ Q+T + P+ GNNRSH+ T+R++ NL + + + VS + +R + Sbjct: 1 MAKKDQLTLRGPLYGNNRSHSKTITRRKWNVNLQPCKVKTAD-GKTTRILVSTRTLRTLK 59 Query: 61 KKG 63 K Sbjct: 60 KHN 62 >UniRef50_C1A4I8 50S ribosomal protein L28 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4I8_GEMAT Length = 73 Score = 53.3 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 4 VCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGM 56 C K GNN SHA N T+R + PNL R + + ++V + + Sbjct: 7 RCYHCDKGVAFGNNVSHANNKTRRTWKPNLQVVRTL--EAGKIIKVKVCTRCL 57 >UniRef50_C9M7F1 Ribosomal protein L28 n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7F1_9BACT Length = 68 Score = 53.0 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MS+VC G+ P TGN SH+ T+RR+ NL + R + +++ A +R Sbjct: 1 MSKVCDCCGRGPATGNQISHSHRRTRRRWQINLQNVRVDL-GAGETRKMKICAHCLRS 57 >UniRef50_B2A2L1 50S ribosomal protein L28 n=19 Tax=Bacteria RepID=RL28_NATTJ Length = 63 Score = 51.8 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+ +C++ GK +G + SH+ TKR++ N+ + V+ R ++V + ++ Sbjct: 1 MANLCEICGKGNNSGASVSHSNKKTKRKWKGNIQKLKAMVD--GRPKKVKVCTQCIK 55 >UniRef50_C1MY26 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MY26_9CHLO Length = 208 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 22 LNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVLAELRAR 74 T+RR+ PN R + E+ V + V+ +R IDK G+D L + Sbjct: 99 NPRTRRRWKPNAQRKRLYSEALDELVRVNVTTYALRWIDKAGGLDAYLLNTTPQ 152 >UniRef50_B6HQJ1 Pc22g07040 protein n=2 Tax=Penicillium RepID=B6HQJ1_PENCW Length = 216 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 9 GKRPVTGNNRSHALN--ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGID 65 G GN S N T+R + PN+ + ++ V ++V+ + +R I K KG+D Sbjct: 69 GASIRFGNKISKGRNEGKTRRSWKPNVRRKKIESKALGESVYIKVTRRALRSIYKAKGLD 128 Query: 66 TVLAELRA 73 L R Sbjct: 129 NYLLSDRP 136 >UniRef50_C0QUB7 50S ribosomal protein L28 n=26 Tax=Bacteria RepID=RL28_PERMH Length = 64 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 4 VCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 VCQ+ GK+ GN +H+ TKR + PNL + + + V AK ++ Sbjct: 3 VCQICGKKTAHGNRVAHSATTTKRTWKPNLQKVKAVLPD-GTTKKIYVCAKCLK 55 >UniRef50_B6JZM9 54S ribosomal protein L24 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JZM9_SCHJY Length = 194 Score = 50.6 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTV 67 G G N T R + N H+ R W ++ + L V A+ ++ I K G+D Sbjct: 50 GSSTYYGKNVPDKGPKTLRTWEVNAHTKRLWSDALQMHFRLNVRARVLKTIKKDGGLDEY 109 Query: 68 LAE 70 L + Sbjct: 110 LLK 112 >UniRef50_B9WB70 Ribosomal protein, large subunit, mitochondrial, putative n=4 Tax=Candida RepID=B9WB70_CANDC Length = 270 Score = 50.6 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Query: 16 NNRSHA----LNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAE 70 RS + LN T R PN+ + W E+ + + LRV+ + ++ I K+ G+D L + Sbjct: 102 RKRSKSCSEYLNKTLRVHRPNVQWTKLWSETLNKRLRLRVATRVLKTISKEGGLDQYLLK 161 Query: 71 LRARGEK 77 K Sbjct: 162 STPARVK 168 >UniRef50_C5FUM3 54S ribosomal protein L24 n=4 Tax=Onygenales RepID=C5FUM3_NANOT Length = 232 Score = 50.6 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 9 GKRPVTGNNRSHALNA--TKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGID 65 G + GN S N T+R + PN+ + + ++ + L+V+ + +R I+K G+D Sbjct: 71 GATIIFGNKISKGRNKGKTRRIWKPNVRKEKVYSKALDEELDLKVTHRVLRTINKVGGLD 130 Query: 66 TVL 68 L Sbjct: 131 EYL 133 >UniRef50_C6UN83 Putative 50S ribosomal subunit protein L28 n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN83_HODCD Length = 91 Score = 49.9 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%) Query: 11 RPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG 63 +P+ G SH+ TKR+F PN + W RFV+ + A+ +R + K G Sbjct: 9 KPLFGARVSHSNKKTKRKFKPNAVKTKLWSLVLNRFVSFKARARFVREVRKYG 61 >UniRef50_A4XIU8 LSU ribosomal protein L28P n=4 Tax=Bacteria RepID=A4XIU8_CALS8 Length = 75 Score = 49.5 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 25/49 (51%) Query: 5 CQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSA 53 C++ K+ GN SH+ ++R + PN+ R + +++ + + S Sbjct: 18 CEICNKKVSFGNKVSHSNKKSRRTWKPNVKKIRVIINGQRKRIYVCTSC 66 >UniRef50_B2W5T0 50S ribosomal protein L24 n=2 Tax=Pleosporineae RepID=B2W5T0_PYRTR Length = 488 Score = 49.5 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 10 KRPVTGNNRSHALN-ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTV 67 KR GNN S T+R + PN+ + + K+ + L ++ +++ID++ G+D Sbjct: 91 KRIRFGNNVSKKTETKTRRNWKPNVLQKSLYSVALKKKIKLVLAKHILKIIDREGGLDEY 150 Query: 68 LAE 70 L + Sbjct: 151 LLK 153 >UniRef50_A3LRR9 Predicted protein n=3 Tax=Pichia RepID=A3LRR9_PICST Length = 266 Score = 49.1 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 19 SHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAELRARGEK 77 S + N R LPN+ + W E+ ++ + ++VS K ++ I K+ G+D L + + EK Sbjct: 106 SESGNKGLRVHLPNIQKTKLWSETLQKSIPIKVSTKVLKTITKEGGLDNYLTKNKPSREK 165 >UniRef50_B9XT04 Ribosomal protein L28 n=1 Tax=bacterium Ellin514 RepID=B9XT04_9BACT Length = 88 Score = 48.7 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 13/66 (19%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 M+R+C++TG P+ G++ +H TKRRF+PNL + + E R++ Sbjct: 1 MARICELTGTGPIKGSHIWRSGKAKKKGGIGTHVTAITKRRFMPNLQRVKAVINGEVRYI 60 Query: 48 TLRVSA 53 + SA Sbjct: 61 RVTASA 66 >UniRef50_C7PZL8 Ribosomal protein L28 n=2 Tax=Actinomycetales RepID=C7PZL8_CATAD Length = 73 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 11/66 (16%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRR---------FLPNLHSHRFWVESEKRFVTLRV 51 MS+ C V GK P GN + + +RR F PN+ R V+ R V L+V Sbjct: 1 MSQRCDVCGKEPSFGNQVARLGHNAQRRRVLGRSARMFRPNIQPVRATVD--GRPVKLKV 58 Query: 52 SAKGMR 57 ++ Sbjct: 59 CTACLK 64 >UniRef50_A9V9D4 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V9D4_MONBE Length = 140 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 9 GKRPVTGNNRS---HALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG 63 GK+ + G + + + + + PN+ R++ + KR+ ++V+ K +R IDK G Sbjct: 28 GKKVLFGVKSAEDKKSPIKSLKIWKPNVFEKRYYSDILKRYTKVKVTTKAIRCIDKAG 85 >UniRef50_B3QZS8 50S ribosomal protein L28 n=1 Tax=Candidatus Phytoplasma mali AT RepID=RL28_PHYMT Length = 62 Score = 46.4 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 4 VCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 C ++ K + GN RSH++NA KR + NL S R + + +++SA+ ++ ++ Sbjct: 3 RCYISQKSTLFGNKRSHSMNAIKRIWKTNLQSIRI-EDENGKIKKIKISARSLKKLN 58 >UniRef50_C4Z044 50S ribosomal protein L28 n=28 Tax=Bacteria RepID=RL28_EUBE2 Length = 61 Score = 46.0 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 M++ C + K P GN SH+ + + + N+ S + V + + V +R Sbjct: 1 MAK-CAICEKGPHFGNAVSHSHRRSNKVWNANVKSVKVKVNGNAK--KMYVCTSCLRS 55 >UniRef50_D1CCP4 Ribosomal protein L28 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCP4_THET1 Length = 73 Score = 45.6 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 11/70 (15%) Query: 1 MSRVCQVTGKRPVTGNNRSHAL--------NATKRRFLPNLHSHRFWVESEKRFVTLRVS 52 M+R C+V GK+ G + + T R F PN+H + E V + + Sbjct: 1 MAR-CEVCGKKTQFGRSIQYHHGGKWARRAQKTNRPFKPNVHRQTVMLNGE--LVKIHIC 57 Query: 53 AKGMRVIDKK 62 + +R + KK Sbjct: 58 TRCLRTLAKK 67 >UniRef50_UPI000023E9E7 hypothetical protein FG10744.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023E9E7 Length = 256 Score = 45.3 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 14 TGNNRSHA-LNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAEL 71 GN + N +R + PN+H F + + V R++ + ++ I ++ G+ L + Sbjct: 73 FGNTVAEKYNNKARRFWRPNVHVKVFKLPALDANVKTRLTLRVLKTIRREGGLQEYLLKS 132 Query: 72 RA 73 + Sbjct: 133 KP 134 >UniRef50_Q6BSR2 DEHA2D06842p n=3 Tax=Saccharomycetales RepID=Q6BSR2_DEBHA Length = 269 Score = 44.9 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 19 SHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAE 70 S + N + R PN+ + W E+ + + RVS +R I ++ G+D L + Sbjct: 110 SESKNKSLRAHKPNIVKAKLWSETLNKTIATRVSTTVLRTITREGGLDNYLLK 162 >UniRef50_C7Z1A1 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7Z1A1_NECH7 Length = 262 Score = 44.5 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 14 TGNNRSHA-LNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAEL 71 GN + N +R + PN+H F + + V R++ + ++ I ++ G+ L + Sbjct: 76 FGNTVAEKYNNKARRFWRPNVHVKSFHLPAVDANVKTRLTLRVLKTIRREGGLQEYLLKS 135 Query: 72 RA 73 + Sbjct: 136 KP 137 >UniRef50_Q6CFD6 YALI0B08074p n=1 Tax=Yarrowia lipolytica RepID=Q6CFD6_YARLI Length = 299 Score = 44.5 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTV 67 G+ G S N T R++ PN E+ + V + + + I ++ G+D Sbjct: 92 GRTLGNGYRSSEFRNKTLRKWKPNAQKTTLPSEALGKNVRITTVPRVLSTIRREGGLDAY 151 Query: 68 LAE 70 L + Sbjct: 152 LTK 154 >UniRef50_O60091 60S ribosomal protein L24, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=RM24_SCHPO Length = 176 Score = 43.7 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 9 GKRPVTGNN-RSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDT 66 G + GNN + T+R ++PN HS + + L V+++ +R IDK+ G+D Sbjct: 34 GSKTEAGNNKIPKFGHKTRRVWIPNGHSKWLYSNVLEEKFHLYVTSRVLRTIDKEGGLDE 93 Query: 67 VLAE 70 L + Sbjct: 94 YLVK 97 >UniRef50_Q03W24 50S ribosomal protein L28 n=6 Tax=Leuconostocaceae RepID=RL28_LEUMM Length = 66 Score = 43.7 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M++ +TG R GN RSHALN+++R + PNL + + ++A+ ++ Sbjct: 1 MAK-DAITGARTRFGNQRSHALNSSRRSWKPNLQKVTVKINGAAPK-KVYLTARTLKAGL 58 Query: 61 KKG 63 K G Sbjct: 59 KNG 61 >UniRef50_A5DV86 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DV86_LODEL Length = 283 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTV 67 G++ S LN R PN + W E+ +R +RVS K +R + K G+D Sbjct: 114 GRQRKKSKTCSEFLNKNLRAHKPNRQVAKIWSEAMQRQFKVRVSTKFLRTMTKDGGLDQY 173 Query: 68 LAE 70 L + Sbjct: 174 LLK 176 >UniRef50_B1ZYG2 50S ribosomal protein L28 n=2 Tax=Verrucomicrobia RepID=RL28_OPITP Length = 76 Score = 41.8 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 14/70 (20%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 M+R+C +TG+RPV G+ +H TKR+F PNL R + + Sbjct: 1 MARICAITGRRPVKGSIINRKGQSKKSGGIGTHVTTITKRKFRPNLQRIRVKLPNGGTK- 59 Query: 48 TLRVSAKGMR 57 + VS K ++ Sbjct: 60 RMLVSVKALK 69 >UniRef50_UPI0001924E92 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001924E92 Length = 172 Score = 41.0 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG 63 G +G + + TKR + PN+ + + V + K +R ID G Sbjct: 38 GAGVKSGFIETFSKKKTKRFWKPNVFEREYHSDLLNETVCYTFTMKAVRAIDYAG 92 >UniRef50_D2R413 Ribosomal protein L28 n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R413_9PLAN Length = 92 Score = 40.2 bits (93), Expect = 0.021, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 14/70 (20%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 M+ C+ KR GN + T+R+F PNL S + + Sbjct: 1 MAYTCEFCDKRASRGNQVETRGKAKYLGGVGTKITGITRRQFKPNLQSVKITTPN-GTNT 59 Query: 48 TLRVSAKGMR 57 T+R+ + ++ Sbjct: 60 TVRICTRCLK 69 >UniRef50_Q1J0Z7 50S ribosomal protein L28 n=4 Tax=Deinococcus RepID=RL28_DEIGD Length = 84 Score = 39.9 bits (92), Expect = 0.028, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 15/74 (20%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 MS C +TGK+ + N TKR NLH + Sbjct: 1 MSHQCYLTGKKTMVVNAVIRRGKARREGGVGRKTTGITKRVQKANLHKK--LIRENGVLK 58 Query: 48 TLRVSAKGMRVIDK 61 + +SA +R ++K Sbjct: 59 RVWLSAAALRTLNK 72 >UniRef50_C1XV04 LSU ribosomal protein L28P n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XV04_9DEIN Length = 103 Score = 39.9 bits (92), Expect = 0.029, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 15/67 (22%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MSR+C+++GKRP N+ + +KR PNL V + + Sbjct: 6 MSRICEISGKRPTVVNSVTRRGKAKADGGVGKKTTGISKRWQYPNLQKVNITVA--GQEI 63 Query: 48 TLRVSAK 54 T RV+ Sbjct: 64 TFRVATS 70 >UniRef50_C7LK22 50S ribosomal subunit protein L28 n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LK22_SULMS Length = 64 Score = 39.5 bits (91), Expect = 0.032, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Query: 15 GNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAK 54 GN SHA N KR+F NL RF++ + +++TL+VS+ Sbjct: 2 GNKISHANNKIKRKFYLNLSKKRFFL--KNKWITLKVSSA 39 >UniRef50_A6DKH3 Ribosomal protein L28 n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH3_9BACT Length = 74 Score = 38.7 bits (89), Expect = 0.052, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 15/71 (21%) Query: 1 MSRVCQVTGKRPVTGNNRSHAL-------------NATKRRFLPNLHSHRFWVESEKRFV 47 M++ C GK+P G H KR F PN+ + + Sbjct: 1 MAKECHFCGKKPHVGGTIVHRGISKKAGGIGLKLVKTNKRVFKPNIQKVKAKINGTAC-- 58 Query: 48 TLRVSAKGMRV 58 T+ +R Sbjct: 59 TVNACTACIRT 69 >UniRef50_Q72G84 50S ribosomal protein L28 n=5 Tax=Deinococci RepID=RL28_THET2 Length = 98 Score = 37.9 bits (87), Expect = 0.097, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 15/69 (21%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MS+VC+++GKRP+ N+ +KRR PNL R V + + Sbjct: 1 MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVA--GQEI 58 Query: 48 TLRVSAKGM 56 T RV+A + Sbjct: 59 TFRVAASHI 67 >UniRef50_B8CWU5 50S ribosomal protein L28 n=9 Tax=Bacteria RepID=RL28_HALOH Length = 76 Score = 37.9 bits (87), Expect = 0.099, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 15/71 (21%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MSRVC++ GK V N + H ++RR PNL + V+ R Sbjct: 1 MSRVCEICGKGTVKANRITRRGKAKKEGGVGKHITKTSRRRQKPNLVKVKAIVD--GRPK 58 Query: 48 TLRVSAKGMRV 58 ++V K ++ Sbjct: 59 RIKVCTKCLKS 69 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B1YV94 50S ribosomal protein L28 n=212 Tax=Bacteria Rep... 107 8e-23 UniRef50_C1DK04 50S ribosomal protein L28 n=56 Tax=Bacteria RepI... 107 1e-22 UniRef50_A7ZTI8 50S ribosomal protein L28 n=178 Tax=Bacteria Rep... 102 3e-21 UniRef50_A9SGN8 Predicted protein n=2 Tax=Physcomitrella patens ... 102 4e-21 UniRef50_B0SXP0 50S ribosomal protein L28 n=26 Tax=Alphaproteoba... 99 4e-20 UniRef50_Q07WG2 50S ribosomal protein L28 n=21 Tax=Bacteria RepI... 98 6e-20 UniRef50_A0K1X6 50S ribosomal protein L28 n=14 Tax=Bacteria RepI... 98 8e-20 UniRef50_UPI0001976DE4 ribosomal protein L28 n=1 Tax=Bifidobacte... 97 1e-19 UniRef50_C3PF15 50S ribosomal protein L28 n=36 Tax=Actinobacteri... 97 2e-19 UniRef50_B3ERW9 50S ribosomal protein L28 n=43 Tax=cellular orga... 96 3e-19 UniRef50_A5G211 50S ribosomal protein L28 n=45 Tax=Alphaproteoba... 96 3e-19 UniRef50_A4YKZ2 50S ribosomal protein L28 n=74 Tax=Proteobacteri... 95 5e-19 UniRef50_A5CV85 50S ribosomal protein L28 n=78 Tax=Bacteria RepI... 94 2e-18 UniRef50_Q83IB6 50S ribosomal protein L28 n=25 Tax=Bacteria RepI... 93 2e-18 UniRef50_B2RM15 50S ribosomal protein L28 n=12 Tax=Bacteria RepI... 93 2e-18 UniRef50_B1ZHJ4 50S ribosomal protein L28 n=55 Tax=cellular orga... 93 3e-18 UniRef50_C5VHU0 Ribosomal protein L28-related protein n=9 Tax=Pr... 93 3e-18 UniRef50_Q5LCF5 50S ribosomal protein L28 n=30 Tax=Bacteroidetes... 92 5e-18 UniRef50_A8P0U6 Putative uncharacterized protein n=1 Tax=Coprino... 92 7e-18 UniRef50_A9WKB7 Ribosomal protein L28 n=3 Tax=Chloroflexus RepID... 91 1e-17 UniRef50_O22795 50S ribosomal protein L28, chloroplastic n=33 Ta... 91 1e-17 UniRef50_Q2S6K2 50S ribosomal protein L28 n=5 Tax=Bacteroidetes ... 91 2e-17 UniRef50_Q31S95 50S ribosomal protein L28 n=4 Tax=cellular organ... 90 2e-17 UniRef50_Q9FW34 Os05g0101400 protein n=10 Tax=cellular organisms... 90 2e-17 UniRef50_Q8DG62 50S ribosomal protein L28 n=7 Tax=cellular organ... 89 4e-17 UniRef50_Q2GMW6 Putative uncharacterized protein n=1 Tax=Chaetom... 89 4e-17 UniRef50_D1ZU12 Whole genome shotgun sequence assembly, scaffold... 89 5e-17 UniRef50_A4RWI5 Putative mitochondrial ribosomal protein L28 n=1... 88 8e-17 UniRef50_A6SKT3 Putative uncharacterized protein n=2 Tax=Sclerot... 88 8e-17 UniRef50_A0D2P9 Chromosome undetermined scaffold_35, whole genom... 88 9e-17 UniRef50_P72851 50S ribosomal protein L28 n=28 Tax=cellular orga... 88 1e-16 UniRef50_B0SEH0 50S ribosomal protein L28 n=6 Tax=Leptospira Rep... 87 2e-16 UniRef50_A0L5U1 50S ribosomal protein L28 n=1 Tax=Magnetococcus ... 87 2e-16 UniRef50_B2ACV6 Predicted CDS Pa_3_11310 n=3 Tax=Eukaryota RepID... 86 3e-16 UniRef50_D0N116 Putative uncharacterized protein n=1 Tax=Phytoph... 85 6e-16 UniRef50_Q7VRK1 50S ribosomal protein L28 n=16 Tax=Bacteria RepI... 84 1e-15 UniRef50_A1CI14 50S ribosomal protein L24 n=8 Tax=Eurotiomycetid... 84 1e-15 UniRef50_C5E271 KLTH0H02618p n=3 Tax=Saccharomycetaceae RepID=C5... 84 1e-15 UniRef50_Q2GE85 50S ribosomal protein L28 n=2 Tax=Neorickettsia ... 84 1e-15 UniRef50_A8GM58 50S ribosomal protein L28 n=15 Tax=Rickettsia Re... 84 2e-15 UniRef50_C1E354 Predicted protein n=2 Tax=Micromonas RepID=C1E35... 84 2e-15 UniRef50_C0S6I5 50S ribosomal protein L24 n=3 Tax=Paracoccidioid... 82 5e-15 UniRef50_B8LKU8 Putative uncharacterized protein n=1 Tax=Picea s... 81 1e-14 UniRef50_Q73HZ5 50S ribosomal protein L28 n=18 Tax=Rickettsiales... 81 1e-14 UniRef50_A2QJ62 Contig An04c0180, complete genome n=8 Tax=Euroti... 81 2e-14 UniRef50_Q1V0W3 50S ribosomal protein L28 n=5 Tax=Bacteria RepID... 80 2e-14 UniRef50_P48129 50S ribosomal protein L28, cyanelle n=4 Tax=Euka... 80 2e-14 UniRef50_Q4PE47 Putative uncharacterized protein n=2 Tax=Ustilag... 80 2e-14 UniRef50_B7FY86 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 80 3e-14 UniRef50_P36525 54S ribosomal protein L24, mitochondrial n=9 Tax... 79 3e-14 UniRef50_Q3B2H1 50S ribosomal protein L28 n=9 Tax=Chlorobiaceae ... 79 4e-14 UniRef50_C9SFC9 54S ribosomal protein L24 n=1 Tax=Verticillium a... 79 5e-14 UniRef50_D2UXL8 Predicted protein (Fragment) n=1 Tax=Naegleria g... 79 6e-14 UniRef50_C5FUM3 54S ribosomal protein L24 n=4 Tax=Onygenales Rep... 78 9e-14 UniRef50_C6BYE0 50S ribosomal protein L28 n=47 Tax=Bacteria RepI... 78 1e-13 UniRef50_A9F3L1 50S ribosomal protein L28 n=1 Tax=Sorangium cell... 77 1e-13 UniRef50_UPI000150AA2C ribosomal protein L28 containing protein ... 77 1e-13 UniRef50_B0D7Z1 Predicted protein n=2 Tax=Agaricomycetes RepID=B... 77 2e-13 UniRef50_UPI00016B25B5 hypothetical protein cdiviTM7_00351 n=1 T... 77 2e-13 UniRef50_Q0SNG2 50S ribosomal protein L28 n=23 Tax=Borrelia RepI... 76 3e-13 UniRef50_C4QZ93 54S ribosomal protein L24, mitochondrial n=1 Tax... 76 3e-13 UniRef50_Q4UF36 50s ribosomal subunit protein L28, putative n=3 ... 76 3e-13 UniRef50_B9L2A7 50S ribosomal protein L28 n=4 Tax=Chloroflexi Re... 76 3e-13 UniRef50_Q54TR3 Putative uncharacterized protein n=1 Tax=Dictyos... 76 5e-13 UniRef50_O77465 Large ribosomal protein L28 n=5 Tax=Toxoplasma g... 75 6e-13 UniRef50_B6HQJ1 Pc22g07040 protein n=2 Tax=Penicillium RepID=B6H... 75 7e-13 UniRef50_A7S0T2 Predicted protein (Fragment) n=1 Tax=Nematostell... 74 1e-12 UniRef50_D1AWU8 Ribosomal protein L28 n=2 Tax=Fusobacteriaceae R... 74 2e-12 UniRef50_A8FKN5 50S ribosomal protein L28 n=47 Tax=Epsilonproteo... 73 2e-12 UniRef50_C7QYT4 Ribosomal protein L28 n=5 Tax=Bacteria RepID=C7Q... 73 2e-12 UniRef50_A5UQX0 Ribosomal protein L28 n=4 Tax=Roseiflexus RepID=... 73 2e-12 UniRef50_B6JZM9 54S ribosomal protein L24 n=1 Tax=Schizosaccharo... 73 3e-12 UniRef50_Q6MDF9 50S ribosomal protein L28 n=14 Tax=Chlamydiales ... 73 3e-12 UniRef50_D0LC20 Ribosomal protein L28 n=4 Tax=Actinobacteria (cl... 73 4e-12 UniRef50_Q1AW97 50S ribosomal protein L28 n=97 Tax=Bacteria RepI... 72 5e-12 UniRef50_B2W5T0 50S ribosomal protein L24 n=2 Tax=Pleosporineae ... 72 6e-12 UniRef50_P0A5V7 50S ribosomal protein L28-1 n=21 Tax=Corynebacte... 72 8e-12 UniRef50_C7ND19 Ribosomal protein L28 n=4 Tax=Bacteria RepID=C7N... 71 8e-12 UniRef50_Q9ZBR5 50S ribosomal protein L28-1 n=10 Tax=Actinobacte... 71 1e-11 UniRef50_Q4Z7B7 50S ribosomal subunit protein L28, putative (Fra... 71 1e-11 UniRef50_B1L9P8 50S ribosomal protein L28 n=64 Tax=Bacteria RepI... 71 1e-11 UniRef50_Q8RDR9 50S ribosomal protein L28 n=10 Tax=Fusobacterium... 71 1e-11 UniRef50_B9WB70 Ribosomal protein, large subunit, mitochondrial,... 71 1e-11 UniRef50_A8F7S8 50S ribosomal protein L28 n=8 Tax=Bacteria RepID... 71 2e-11 UniRef50_A3LRR9 Predicted protein n=3 Tax=Pichia RepID=A3LRR9_PICST 71 2e-11 UniRef50_UPI000023E9E7 hypothetical protein FG10744.1 n=1 Tax=Gi... 70 2e-11 UniRef50_O60091 60S ribosomal protein L24, mitochondrial n=1 Tax... 70 2e-11 UniRef50_Q7RFP1 Ribosomal protein L28, putative n=1 Tax=Plasmodi... 70 2e-11 UniRef50_C0QM36 50S ribosomal protein L28 n=5 Tax=Bacteria RepID... 70 3e-11 UniRef50_A7HDC0 50S ribosomal protein L28 n=18 Tax=Bacteria RepI... 69 5e-11 UniRef50_C7Z1A1 Predicted protein n=1 Tax=Nectria haematococca m... 69 6e-11 UniRef50_C1MY26 Predicted protein n=1 Tax=Micromonas pusilla CCM... 69 6e-11 UniRef50_D0WND3 Conserved domain protein n=1 Tax=Actinomyces sp.... 68 7e-11 UniRef50_A5FQ75 LSU ribosomal protein L28P n=5 Tax=Dehalococcoid... 68 9e-11 UniRef50_B2S2V9 50S ribosomal protein L28 n=4 Tax=Treponema RepI... 67 1e-10 UniRef50_Q6B8P2 50S ribosomal protein L28, chloroplastic n=1 Tax... 67 1e-10 UniRef50_A9V9D4 Predicted protein n=1 Tax=Monosiga brevicollis R... 67 1e-10 UniRef50_D2MQH7 Ribosomal protein L28 n=1 Tax=Bulleidia extructa... 67 2e-10 UniRef50_Q6CFD6 YALI0B08074p n=1 Tax=Yarrowia lipolytica RepID=Q... 67 2e-10 UniRef50_A5IXN6 50S ribosomal protein L28 n=8 Tax=Bacteria RepID... 67 2e-10 UniRef50_B2URC9 50S ribosomal protein L28 n=4 Tax=Verrucomicrobi... 67 2e-10 UniRef50_C0H4C3 Organelle ribosomal protein L28, putative n=6 Ta... 67 2e-10 UniRef50_B0S150 50S ribosomal protein L28 n=3 Tax=Clostridiales ... 66 3e-10 UniRef50_Q6BSR2 DEHA2D06842p n=3 Tax=Saccharomycetales RepID=Q6B... 66 3e-10 UniRef50_C1A4I8 50S ribosomal protein L28 n=1 Tax=Gemmatimonas a... 66 3e-10 UniRef50_C6D4E7 Ribosomal protein L28 n=4 Tax=Firmicutes RepID=C... 66 4e-10 UniRef50_B9E1F2 50S ribosomal protein L28 n=22 Tax=Clostridia Re... 66 5e-10 UniRef50_B2KAU3 50S ribosomal protein L28 n=4 Tax=Bacteria RepID... 65 7e-10 UniRef50_B1AIJ7 50S ribosomal protein L28 n=24 Tax=Bacteria RepI... 65 8e-10 UniRef50_B5YNJ8 RK28, ribosomal protein 28, 50S large ribosomal ... 65 8e-10 UniRef50_B5Y795 50S ribosomal protein L28 n=1 Tax=Coprothermobac... 64 1e-09 UniRef50_Q01CK5 50S ribosomal protein L28 (ISS) n=2 Tax=Eukaryot... 64 1e-09 UniRef50_B5YHT7 Ribosomal protein L28 n=1 Tax=Thermodesulfovibri... 64 1e-09 UniRef50_C9M7F1 Ribosomal protein L28 n=1 Tax=Jonquetella anthro... 64 2e-09 UniRef50_B9Y7G9 Putative uncharacterized protein n=1 Tax=Holdema... 64 2e-09 UniRef50_Q2SS02 50S ribosomal protein L28 n=20 Tax=Bacteria RepI... 62 4e-09 UniRef50_B2A2L1 50S ribosomal protein L28 n=19 Tax=Bacteria RepI... 62 5e-09 UniRef50_B1C5T0 Putative uncharacterized protein (Fragment) n=1 ... 62 6e-09 UniRef50_C5J7C0 50S ribosomal protein L28 n=2 Tax=Mycoplasma Rep... 61 1e-08 UniRef50_C0QUB7 50S ribosomal protein L28 n=26 Tax=Bacteria RepI... 60 2e-08 UniRef50_A4XIU8 LSU ribosomal protein L28P n=4 Tax=Bacteria RepI... 60 2e-08 UniRef50_C7PZL8 Ribosomal protein L28 n=2 Tax=Actinomycetales Re... 59 3e-08 UniRef50_D1CCP4 Ribosomal protein L28 n=1 Tax=Thermobaculum terr... 59 5e-08 UniRef50_C4Z044 50S ribosomal protein L28 n=28 Tax=Bacteria RepI... 58 7e-08 UniRef50_A2RHS3 50S ribosomal protein L28 n=266 Tax=Bacteria Rep... 58 1e-07 UniRef50_P75171 50S ribosomal protein L28 n=1 Tax=Mycoplasma pne... 58 1e-07 UniRef50_Q85G82 50S ribosomal protein L28, chloroplastic n=1 Tax... 56 4e-07 UniRef50_C6UN83 Putative 50S ribosomal subunit protein L28 n=1 T... 55 8e-07 UniRef50_D1R4Y7 Putative uncharacterized protein n=1 Tax=Parachl... 54 1e-06 UniRef50_Q03W24 50S ribosomal protein L28 n=6 Tax=Leuconostocace... 53 4e-06 UniRef50_B3QZS8 50S ribosomal protein L28 n=1 Tax=Candidatus Phy... 52 8e-06 UniRef50_B9XT04 Ribosomal protein L28 n=1 Tax=bacterium Ellin514... 48 1e-04 Sequences not found previously or not previously below threshold: UniRef50_A5DV86 Putative uncharacterized protein n=1 Tax=Loddero... 62 7e-09 UniRef50_UPI0001924E92 PREDICTED: similar to predicted protein n... 54 1e-06 UniRef50_Q8IKR3 Mitochondrial ribosomal protein L28, putative n=... 49 3e-05 UniRef50_D2R413 Ribosomal protein L28 n=1 Tax=Pirellula staleyi ... 47 1e-04 UniRef50_Q13084 39S ribosomal protein L28, mitochondrial n=36 Ta... 47 2e-04 UniRef50_B8CWU5 50S ribosomal protein L28 n=9 Tax=Bacteria RepID... 46 4e-04 UniRef50_A6DKH3 Ribosomal protein L28 n=1 Tax=Lentisphaera arane... 45 0.001 UniRef50_Q4TDV8 Chromosome undetermined SCAF6006, whole genome s... 44 0.001 UniRef50_B3SAW5 Putative uncharacterized protein n=1 Tax=Trichop... 44 0.002 UniRef50_O76606 Putative uncharacterized protein T25D3.2 n=3 Tax... 44 0.002 UniRef50_A9KPH7 50S ribosomal protein L28 n=12 Tax=Bacteria RepI... 44 0.002 UniRef50_B1ZYG2 50S ribosomal protein L28 n=2 Tax=Verrucomicrobi... 42 0.005 UniRef50_D1N9H5 Ribosomal protein L28 n=1 Tax=Victivallis vadens... 42 0.009 UniRef50_Q4N2X7 Putative uncharacterized protein n=1 Tax=Theiler... 41 0.009 UniRef50_C1BSH9 39S ribosomal protein L28, mitochondrial n=2 Tax... 40 0.018 UniRef50_Q1J0Z7 50S ribosomal protein L28 n=4 Tax=Deinococcus Re... 40 0.019 UniRef50_C1XV04 LSU ribosomal protein L28P n=1 Tax=Meiothermus s... 40 0.020 UniRef50_UPI000180C601 PREDICTED: similar to mitochondrial ribos... 39 0.040 UniRef50_Q72G84 50S ribosomal protein L28 n=5 Tax=Deinococci Rep... 39 0.040 UniRef50_Q5D9B2 SJCHGC01033 protein n=3 Tax=Schistosoma RepID=Q5... 39 0.044 UniRef50_B7Q818 39S ribosomal protein L28, putative (Fragment) n... 39 0.067 >UniRef50_B1YV94 50S ribosomal protein L28 n=212 Tax=Bacteria RepID=RL28_BURA4 Length = 77 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 56/76 (73%), Positives = 65/76 (85%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+RVCQVTGK P++GNN SHA N TKRRFLPNL + RFWVESE R+V LRVS G+R+ID Sbjct: 1 MARVCQVTGKAPMSGNNVSHANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLID 60 Query: 61 KKGIDTVLAELRARGE 76 K GID+VLA+LRARGE Sbjct: 61 KNGIDSVLADLRARGE 76 >UniRef50_C1DK04 50S ribosomal protein L28 n=56 Tax=Bacteria RepID=RL28_AZOVD Length = 78 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 66/78 (84%), Positives = 69/78 (88%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQVTGK PVTGNN SHA N T+RRFLPNL HRFWVESEKRFV LRVSAKGMR+ID Sbjct: 1 MSRVCQVTGKGPVTGNNISHANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIID 60 Query: 61 KKGIDTVLAELRARGEKY 78 K+GID VLAELRARGEK Sbjct: 61 KRGIDVVLAELRARGEKV 78 >UniRef50_A7ZTI8 50S ribosomal protein L28 n=178 Tax=Bacteria RepID=RL28_ECO24 Length = 78 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 78/78 (100%), Positives = 78/78 (100%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID Sbjct: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 Query: 61 KKGIDTVLAELRARGEKY 78 KKGIDTVLAELRARGEKY Sbjct: 61 KKGIDTVLAELRARGEKY 78 >UniRef50_A9SGN8 Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SGN8_PHYPA Length = 129 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 38/70 (54%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 SR C +TGK+ G S + + TK PNL R W E KRFV LR+S K ++ I+K Sbjct: 53 SRRCDLTGKKANNGYKVSFSNHRTKHLQQPNLQYKRLWWEEGKRFVKLRISTKALKTIEK 112 Query: 62 KGIDTVLAEL 71 G+ + + Sbjct: 113 NGLQAMARKA 122 >UniRef50_B0SXP0 50S ribosomal protein L28 n=26 Tax=Alphaproteobacteria RepID=RL28_CAUSK Length = 101 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++TG P+ G+N SH+ TKRRFLP L +S + LR+S +R +D Sbjct: 1 MSRRCELTGIGPMVGHNVSHSNIKTKRRFLPALSPASLQSDSLGQTFKLRISNAALRTLD 60 Query: 61 -KKGIDTVLAELRAR 74 + G+D L + Sbjct: 61 FRGGLDVFLLGAKDE 75 >UniRef50_Q07WG2 50S ribosomal protein L28 n=21 Tax=Bacteria RepID=RL28_SHEFN Length = 78 Score = 98.2 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 58/78 (74%), Positives = 69/78 (88%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQVTGK+P+ GNNRSHA N+T+RRFLPNL +HRFW+E EKRFV LRVS KG+R+ID Sbjct: 1 MSRVCQVTGKKPMVGNNRSHAKNSTRRRFLPNLQNHRFWLEEEKRFVQLRVSTKGIRIID 60 Query: 61 KKGIDTVLAELRARGEKY 78 KKGI+ ++ ELRARGEK Sbjct: 61 KKGIEVIVKELRARGEKV 78 >UniRef50_A0K1X6 50S ribosomal protein L28 n=14 Tax=Bacteria RepID=RL28_ARTS2 Length = 78 Score = 97.9 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 53/78 (67%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+ CQVTG P G++ SH+ KRRF PN+ R+WV S +R VTL+VSA+G++ ID Sbjct: 1 MAAHCQVTGAEPGFGHSISHSHRRNKRRFDPNIQKKRYWVPSLRRNVTLQVSARGIKTID 60 Query: 61 KKGIDTVLAELRARGEKY 78 +GID V+A + ARG K Sbjct: 61 VRGIDVVVAAILARGVKL 78 >UniRef50_UPI0001976DE4 ribosomal protein L28 n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=UPI0001976DE4 Length = 115 Score = 97.1 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 38/74 (51%), Positives = 48/74 (64%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+ CQ+ G R TGN SH+ T+RRF PNL + R+WV S R VTL VS KGM+ ID Sbjct: 18 MSKQCQILGTRASTGNRVSHSHRKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKGMKTID 77 Query: 61 KKGIDTVLAELRAR 74 + GI+ LA +R Sbjct: 78 RIGIEAALARIRRN 91 >UniRef50_C3PF15 50S ribosomal protein L28 n=36 Tax=Actinobacteridae RepID=RL28_CORA7 Length = 78 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 57/78 (73%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS +CQVTG++P G SH+ T RR+ PN+ R+++ SE R +TL VS KGM++ID Sbjct: 1 MSAICQVTGRKPEFGKQVSHSHRRTSRRWNPNVQRRRYYLPSEGRTITLTVSTKGMKIID 60 Query: 61 KKGIDTVLAELRARGEKY 78 + GI++V+A++RARGEK Sbjct: 61 RDGIESVVAKIRARGEKI 78 >UniRef50_B3ERW9 50S ribosomal protein L28 n=43 Tax=cellular organisms RepID=RL28_AMOA5 Length = 83 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 38/75 (50%), Positives = 49/75 (65%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+VC +TGKRP GN SHA N TKRRF PNL +F+V ++ LRVS +R I+ Sbjct: 1 MSKVCDITGKRPRVGNKVSHANNKTKRRFYPNLQFKKFYVPETNSWIVLRVSTSVIRTIN 60 Query: 61 KKGIDTVLAELRARG 75 KKGI V+ E + +G Sbjct: 61 KKGILEVIKEAQRKG 75 >UniRef50_A5G211 50S ribosomal protein L28 n=45 Tax=Alphaproteobacteria RepID=RL28_ACICJ Length = 100 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R C +TGK ++GNN SHA N ++RRFLPNL ++ V LRV+ +G+ I+ Sbjct: 1 MTRRCDITGKSVLSGNNVSHANNKSRRRFLPNLQDSALQSDALGHSVKLRVTPRGLATIE 60 Query: 61 -KKGIDTVLAELRARGEK 77 K G+D L + R Sbjct: 61 QKGGLDAFLLDTPNRKLT 78 >UniRef50_A4YKZ2 50S ribosomal protein L28 n=74 Tax=Proteobacteria RepID=RL28_BRASO Length = 102 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++T K P G+ SH+ TKRRFLPNL + F ++ R V LRVS ++ +D Sbjct: 1 MSRRCELTAKGPQVGHKVSHSNIKTKRRFLPNLCNVTFISDALGRNVRLRVSTNAIKSVD 60 Query: 61 K-KGIDTVLAELRA 73 G+D L + A Sbjct: 61 HNGGLDAYLMKANA 74 >UniRef50_A5CV85 50S ribosomal protein L28 n=78 Tax=Bacteria RepID=RL28_CLAM3 Length = 78 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 37/78 (47%), Positives = 53/78 (67%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+ CQVTG P G+N SH+ TKRRF PN+ ++V S +R V L +SAKG++VID Sbjct: 1 MAATCQVTGAVPGFGHNISHSHRRTKRRFDPNVQKKTYYVPSLRRNVKLTLSAKGIKVID 60 Query: 61 KKGIDTVLAELRARGEKY 78 +GI++V+ ++ ARG K Sbjct: 61 ARGIESVVKDILARGVKI 78 >UniRef50_Q83IB6 50S ribosomal protein L28 n=25 Tax=Bacteria RepID=RL28_TROW8 Length = 78 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 40/78 (51%), Positives = 50/78 (64%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS VCQVTG P G SH+ TKRRF PN+ F+V + R VTL VS KG+R+ID Sbjct: 1 MSSVCQVTGASPGFGYAVSHSHRRTKRRFDPNVRRRTFYVATLGRRVTLNVSVKGLRLID 60 Query: 61 KKGIDTVLAELRARGEKY 78 K+GID V+ +L +G K Sbjct: 61 KRGIDAVVRDLIKKGVKL 78 >UniRef50_B2RM15 50S ribosomal protein L28 n=12 Tax=Bacteria RepID=RL28_PORG3 Length = 79 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 48/75 (64%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS++CQ+TGK+ + GNN SH+ TKR F NL +F+ + +V LR+SA G+R+I+ Sbjct: 1 MSKICQITGKKAMVGNNVSHSKRRTKRVFDVNLFRKKFYWVEQDCWVVLRISAAGLRLIN 60 Query: 61 KKGIDTVLAELRARG 75 K G+D + +G Sbjct: 61 KIGLDAAIKRAAEKG 75 >UniRef50_B1ZHJ4 50S ribosomal protein L28 n=55 Tax=cellular organisms RepID=RL28_METPB Length = 101 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++TGK G+ SH+ TK RFLPNL + ++ R V LRV+A +R ++ Sbjct: 1 MSRRCELTGKAVQVGHLVSHSNRKTKCRFLPNLCNVTLQSDALNRRVRLRVTAHALRSVE 60 Query: 61 -KKGIDTVLAELRA 73 + G+D L + R Sbjct: 61 HRGGLDAFLIKARE 74 >UniRef50_C5VHU0 Ribosomal protein L28-related protein n=9 Tax=Prevotella RepID=C5VHU0_9BACT Length = 87 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 50/75 (66%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS++CQ+TGK+ G N SH+ + TKR F NL S +F+ E ++ L++SA G+R+I+ Sbjct: 1 MSKICQITGKKAQIGCNVSHSKHRTKRSFDVNLFSKKFYYVEEACWIQLKISAAGLRLIN 60 Query: 61 KKGIDTVLAELRARG 75 K G+D L + ++G Sbjct: 61 KVGLDAALKQAVSKG 75 >UniRef50_Q5LCF5 50S ribosomal protein L28 n=30 Tax=Bacteroidetes RepID=RL28_BACFN Length = 86 Score = 92.1 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 31/75 (41%), Positives = 51/75 (68%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS++CQ+TGK+ + GNN SH+ TKR F NL + +F+ + +++L + A G+R+I+ Sbjct: 1 MSKICQITGKKAMIGNNVSHSKRRTKRTFDLNLFNKKFYYVEQDCWISLSLCAAGLRIIN 60 Query: 61 KKGIDTVLAELRARG 75 KKG+D L + A+G Sbjct: 61 KKGLDAALNDAVAKG 75 >UniRef50_A8P0U6 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8P0U6_COPC7 Length = 192 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 ++ GK GNN + + T+R +LPN+ R E V ++V+ + +R I K Sbjct: 18 AQFGLFGGKSIQYGNNVPFSKHKTRRTWLPNVQRKRLDSEVLGEKVRIKVTTRALRTIKK 77 Query: 62 -KGIDTVLAELRARGEKY 78 G+D L ++ + Sbjct: 78 YGGLDNYLKGTQSHKLSF 95 >UniRef50_A9WKB7 Ribosomal protein L28 n=3 Tax=Chloroflexus RepID=A9WKB7_CHLAA Length = 84 Score = 91.3 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C +TG+ P G N S + T RR+LPN+ R WV E+RFV L++SA +R I+ Sbjct: 1 MSRRCDLTGRSPSFGYNVSFSKRRTNRRWLPNVQKRRIWVPEEQRFVRLKLSAAALREIE 60 Query: 61 KKGIDTVLAE 70 +KG+ L + Sbjct: 61 RKGLLQALRD 70 >UniRef50_O22795 50S ribosomal protein L28, chloroplastic n=33 Tax=cellular organisms RepID=RK28_ARATH Length = 143 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 39/69 (56%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 R+C TGK+ N S + + TK+ NL R W E+ KRFV LR+S K ++ I+K Sbjct: 68 RICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKN 127 Query: 63 GIDTVLAEL 71 G+D V + Sbjct: 128 GLDAVAKKA 136 >UniRef50_Q2S6K2 50S ribosomal protein L28 n=5 Tax=Bacteroidetes RepID=RL28_SALRD Length = 78 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 38/75 (50%), Positives = 50/75 (66%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R VTG+ PVTGN+ S + T RRF NLH RF++ SE R V L+VS+K ++ I+ Sbjct: 1 MARKDDVTGEGPVTGNSVSDSNQKTNRRFKRNLHEKRFYIPSEDRHVKLKVSSKTLKTIN 60 Query: 61 KKGIDTVLAELRARG 75 KKGI VL E R +G Sbjct: 61 KKGIQAVLEEARKQG 75 >UniRef50_Q31S95 50S ribosomal protein L28 n=4 Tax=cellular organisms RepID=RL28_SYNE7 Length = 78 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 38/71 (53%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQ+TGK+ SH+ TKR NL R W RFV LR+S K ++ + Sbjct: 1 MSRVCQLTGKKANNAYAISHSHRRTKRLQNVNLQEKRIWWPEGNRFVKLRLSTKAIKTLQ 60 Query: 61 KKGIDTVLAEL 71 KKG+ EL Sbjct: 61 KKGLSAYAREL 71 >UniRef50_Q9FW34 Os05g0101400 protein n=10 Tax=cellular organisms RepID=Q9FW34_ORYSJ Length = 137 Score = 89.8 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 R+C T K+ N S + + TK++ NL + W E KRFV LR+S K ++ I+K Sbjct: 62 RICPFTDKKTNRANKVSFSNHKTKKQQFVNLQYKKLWWEEGKRFVKLRLSTKALKTIEKH 121 Query: 63 GIDTVLAEL 71 G+D V + Sbjct: 122 GLDAVAKKA 130 >UniRef50_Q8DG62 50S ribosomal protein L28 n=7 Tax=cellular organisms RepID=RL28_THEEB Length = 78 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 39/71 (54%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVCQ+TGK+ SH+ TK+ NL R W KR+V LR+S K ++ ++ Sbjct: 1 MSRVCQLTGKKANNAYAISHSHRRTKKLQQVNLQWKRVWWPEGKRWVRLRLSTKAIKTLE 60 Query: 61 KKGIDTVLAEL 71 +KG+ E Sbjct: 61 RKGLSAFAKEA 71 >UniRef50_Q2GMW6 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2GMW6_CHAGB Length = 254 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Query: 11 RPVTGNNRSHALN-ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVL 68 R GNN S N T+R++ PN+H R W S FV RV+A+ +R +DK G+D L Sbjct: 84 RIRFGNNVSERNNIKTRRQWRPNVHHKRLWSASLGVFVRTRVTARVLRTVDKAGGLDEYL 143 Query: 69 AELRARGEK 77 + + Sbjct: 144 LGRTPQRVR 152 >UniRef50_D1ZU12 Whole genome shotgun sequence assembly, scaffold_114 n=1 Tax=Sordaria macrospora RepID=D1ZU12_SORMA Length = 266 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 12 PVTGNNRSHAL-NATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVLA 69 GNN S T+R++ PN+ R W +S FV RV+ + +R IDK G+D L Sbjct: 96 IRFGNNVSKRNEIKTRRKWRPNVQQKRLWSKSLGVFVRTRVTTRVLRTIDKVGGLDEYLL 155 Query: 70 ELRARGEK 77 +A K Sbjct: 156 GHKAARVK 163 >UniRef50_A4RWI5 Putative mitochondrial ribosomal protein L28 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RWI5_OSTLU Length = 125 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%) Query: 2 SRVCQVTGKRPVTGNNRSH-ALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 +R GK GNN S N T+RR+LPN R + E + + +RV+A +R +D Sbjct: 21 ARRGLFAGKHIKFGNNVSEDGGNKTRRRWLPNAQKKRVYSELLEEMIPMRVTAHALRCMD 80 Query: 61 K-KGIDTVLAELRARGEK 77 K G+D + R + K Sbjct: 81 KAGGLDEYILRTRDQDLK 98 >UniRef50_A6SKT3 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6SKT3_BOTFB Length = 233 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 11 RPVTGNNRSHAL-NATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVL 68 + GN S T+R + PN+ R + S R + LRV+ K +R IDK G+D L Sbjct: 64 KIRYGNIVSEKNEIKTRRHWRPNVQRKRLYSPSLGRQIKLRVTTKVLRTIDKAGGLDEYL 123 Query: 69 AELRARGEK 77 + + K Sbjct: 124 LGEKTQRIK 132 >UniRef50_A0D2P9 Chromosome undetermined scaffold_35, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0D2P9_PARTE Length = 289 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+ C GK+P +GN + T+R ++PN+ + R + ++V+AK M+ I Sbjct: 58 MSQFCLWHGKQPKSGNQTCFSEKKTRRSWMPNVQKQTYESLILGRRIHVKVTAKTMKCIR 117 Query: 61 KKG-IDTVLAELRARG 75 K G D + + + Sbjct: 118 KAGSFDNYILLTKPQD 133 >UniRef50_P72851 50S ribosomal protein L28 n=28 Tax=cellular organisms RepID=RL28_SYNY3 Length = 78 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 38/71 (53%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R CQ+TGK+ G SH+ TK+ NL R W RFV LR+S ++ ++ Sbjct: 1 MARRCQLTGKKANNGFAVSHSHRRTKKLQQANLQWKRVWWPEGNRFVRLRLSTTAIKTLE 60 Query: 61 KKGIDTVLAEL 71 KGI+ + E Sbjct: 61 SKGINAMAKEA 71 >UniRef50_B0SEH0 50S ribosomal protein L28 n=6 Tax=Leptospira RepID=RL28_LEPBA Length = 96 Score = 87.1 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 42/70 (60%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R C VTGK GNN SH+ +R + N+ + + ++E E R+V +++S + +R + Sbjct: 1 MARTCVVTGKGTTAGNNVSHSHKKNRRIWKVNVITKKIFLEDENRWVRVKISTRALRTLR 60 Query: 61 KKGIDTVLAE 70 KKG+ + + Sbjct: 61 KKGLKVAIKD 70 >UniRef50_A0L5U1 50S ribosomal protein L28 n=1 Tax=Magnetococcus sp. MC-1 RepID=RL28_MAGSM Length = 95 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R + GK P GN SH+ T+R+++PN+ + W + + V + +S +R +D Sbjct: 1 MARKRTLGGKAPQAGNKVSHSQRKTRRQWMPNIQTKALWSITLGQSVKVTISTSALRSVD 60 Query: 61 K-KGIDTVLAELRA 73 G+D L ++ Sbjct: 61 NAGGLDNYLLKILP 74 >UniRef50_B2ACV6 Predicted CDS Pa_3_11310 n=3 Tax=Eukaryota RepID=B2ACV6_PODAN Length = 366 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 11 RPVTGNNRSHAL-NATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVL 68 GNN S T+R + PN+H R + S + +V R++ + +R IDK G+D L Sbjct: 161 TIRYGNNVSEKNEIKTRRTWRPNVHRKRLFSLSLRTWVQTRLTTRVLRTIDKVGGLDEYL 220 Query: 69 AELRARGEK 77 ++ K Sbjct: 221 LGIKPNRIK 229 >UniRef50_D0N116 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0N116_PHYIN Length = 119 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 ++ G+ GNN S + T+R + N + E+ V L V+ +R +DK Sbjct: 25 AQRGLFAGRDKAFGNNVSFSKRRTRRAWKVNHQWKSLYSEALDEKVGLNVTTHTLRCVDK 84 Query: 62 -KGIDTVLAELRARGE 76 G+D L ++ E Sbjct: 85 IGGLDNYLLSIKDERE 100 >UniRef50_Q7VRK1 50S ribosomal protein L28 n=16 Tax=Bacteria RepID=RL28_BLOFL Length = 79 Score = 84.4 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 43/77 (55%), Positives = 63/77 (81%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR CQ+T K+P+ GN RSHA+NATKR F+PN+HSHRFW+E++K+F+ LR+S KG+R++D Sbjct: 1 MSRTCQITRKKPMNGNKRSHAMNATKRWFIPNIHSHRFWIENKKKFIKLRISTKGIRLVD 60 Query: 61 KKGIDTVLAELRARGEK 77 K GI+ L+ + + +K Sbjct: 61 KLGIEQFLSIVSFKNKK 77 >UniRef50_A1CI14 50S ribosomal protein L24 n=8 Tax=Eurotiomycetidae RepID=A1CI14_ASPCL Length = 212 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 9 GKRPVTGNNRSHALN--ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGID 65 G GN S N T+R + PN+ + W E+ F+ ++V+ K +R I K G+D Sbjct: 69 GAMIQFGNKISKGRNEGKTRRSWKPNVRRKKLWSEALGEFLFIKVTRKALRTIWKSGGLD 128 Query: 66 TVLAELRARGEK 77 L + R K Sbjct: 129 NYLLDDRPGRIK 140 >UniRef50_C5E271 KLTH0H02618p n=3 Tax=Saccharomycetaceae RepID=C5E271_LACTC Length = 273 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 S G GNN + + T+RR+LPN+ W E+ R V++R++AK +R + K Sbjct: 84 SNKGLYGGSFIQYGNNVAESKTKTRRRWLPNVIKKGLWSEALSRNVSIRMTAKVLRTVTK 143 Query: 62 -KGIDTVLAELRARGEK 77 GID L + ++ K Sbjct: 144 EGGIDNYLTKEKSARIK 160 >UniRef50_Q2GE85 50S ribosomal protein L28 n=2 Tax=Neorickettsia RepID=RL28_NEOSM Length = 102 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 1/76 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS C +TG GN SH+ TK+RF+PNL + + K+ +VSAK +R ID Sbjct: 1 MSNSCDLTGHGWQNGNMVSHSNRKTKKRFMPNLQRVTVFSDVLKQKFRFKVSAKTIRTID 60 Query: 61 -KKGIDTVLAELRARG 75 K G+D L + Sbjct: 61 FKGGLDDFLRNTKNSK 76 >UniRef50_A8GM58 50S ribosomal protein L28 n=15 Tax=Rickettsia RepID=RL28_RICAH Length = 97 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSR C++TG + GNN SH+ T+RRF PNL S +F + L V+A+ + ++ Sbjct: 1 MSRKCELTGVGVLYGNNVSHSQRKTRRRFEPNLRSVKFTSDITAGKYRLSVNARCISSVE 60 Query: 61 K-KGIDTVLAELRAR 74 K G D + + Sbjct: 61 KAGGFDAYILQADDN 75 >UniRef50_C1E354 Predicted protein n=2 Tax=Micromonas RepID=C1E354_9CHLO Length = 208 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 R C +TGK+ G S + K+ NL R + ++R+V LR+S M+ I+K Sbjct: 66 RKCMLTGKKANNGWTVSFSHIRNKKLQGVNLQYKRVYWPEKQRYVRLRISTSAMKSINKI 125 Query: 63 GIDTVLAEL 71 G++ + Sbjct: 126 GLEAMAKRA 134 >UniRef50_C0S6I5 50S ribosomal protein L24 n=3 Tax=Paracoccidioides brasiliensis RepID=C0S6I5_PARBP Length = 203 Score = 82.1 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 9 GKRPVTGNNRSHALNA--TKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGID 65 G GN S N T+R + PN+ + E+ + L+V+ + +R I K G+D Sbjct: 73 GSTIQFGNKISKGRNKGKTRRTWKPNVRHEELYSEALGTTLKLKVTHRVLRTIKKVGGLD 132 Query: 66 TVLAELRARGEK 77 L + K Sbjct: 133 QYLLGDKPARIK 144 >UniRef50_B8LKU8 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LKU8_PICSI Length = 222 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Query: 2 SRVCQVTGKRPVTGNNRSH-ALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 ++ G+ GNN S N T+R + PN+ R + R++ ++V+ +R ID Sbjct: 43 AKRGLYGGRHIQFGNNISEDGGNKTRRTWKPNVQEKRLFSLILDRYIRIKVTTHTLRCID 102 Query: 61 KKG-IDTVLAELRARG 75 K G ID L ++ R Sbjct: 103 KAGCIDDYLLQMPVRK 118 >UniRef50_Q73HZ5 50S ribosomal protein L28 n=18 Tax=Rickettsiales RepID=RL28_WOLPM Length = 104 Score = 80.5 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVC++T ++ GN SH+ TKR FL NLH + + RV+ + +R ID Sbjct: 1 MSRVCELTNRKKSFGNKVSHSNRKTKRTFLLNLHKVTLTSDILNKKFRFRVATRTLRTID 60 Query: 61 KKG-IDTVLAELR 72 KG +D L R Sbjct: 61 YKGDLDAFLLNTR 73 >UniRef50_A2QJ62 Contig An04c0180, complete genome n=8 Tax=Eurotiomycetidae RepID=A2QJ62_ASPNC Length = 299 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 9 GKRPVTGNNRSHALN--ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGID 65 G GN S N T+R + PN+ + + E+ + ++V+ K +R I K G+D Sbjct: 156 GAMIQFGNKISQGRNEGKTRRFWKPNVRRKKLYSEALGEDLFIKVTRKALRTIRKAGGLD 215 Query: 66 TVLAELRARGEK 77 L R + Sbjct: 216 NYLLSDRPGRIR 227 >UniRef50_Q1V0W3 50S ribosomal protein L28 n=5 Tax=Bacteria RepID=Q1V0W3_PELUB Length = 107 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+ C++TGK P+ G+N SHA N TKRRFLPNL +F E KR +TL VS G+R +D Sbjct: 1 MSKKCELTGKIPMKGHNVSHANNKTKRRFLPNLKKAKFTSELLKRSLTLTVSNAGVRSVD 60 Query: 61 KKG-IDTVLAELRARGE 76 KKG D L ++ + Sbjct: 61 KKGTFDQFLKTVKNKNI 77 >UniRef50_P48129 50S ribosomal protein L28, cyanelle n=4 Tax=Eukaryota RepID=RK28_CYAPA Length = 70 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 40/69 (57%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R C++TGK+ G SH+ TK NL + R W + KR++ L+VS K ++ + Sbjct: 1 MARQCELTGKKANNGYTVSHSHRRTKCLQKANLQTKRIWSPTLKRWLKLQVSTKVIKDLK 60 Query: 61 KKGIDTVLA 69 +K ID +L Sbjct: 61 RKSIDALLK 69 >UniRef50_Q4PE47 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4PE47_USTMA Length = 157 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 S+ GK +G+N + T R + PN+ S + W + RFV +VS +R +DK Sbjct: 53 SQRGLYDGKMIQSGHNVPKSRQKTARTWSPNIQSKKLWSNTLDRFVRAKVSTSALRSMDK 112 Query: 62 -KGIDTVLAELRARG 75 G+D LA+ + Sbjct: 113 MGGLDIYLAKTSSEK 127 >UniRef50_B7FY86 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FY86_PHATR Length = 89 Score = 79.8 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 SR GK TGNN S ++ ATKR F PN+ R + E V ++ +R IDK Sbjct: 15 SRRGLYDGKDVRTGNNVSFSMRATKRTFKPNVMIKRVYSEILDEMVKFHLTTSTLRSIDK 74 Query: 62 -KGIDTVLAE 70 G+D L + Sbjct: 75 AGGLDNYLLK 84 >UniRef50_P36525 54S ribosomal protein L24, mitochondrial n=9 Tax=Saccharomycetaceae RepID=RM24_YEAST Length = 258 Score = 79.4 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 S G GNN S + T++++LPN+ W E+ R ++++++AK ++ I K Sbjct: 69 SNKGLYGGSFVQFGNNISESKAKTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISK 128 Query: 62 -KGIDTVLAELRARGEK 77 GID L + ++ K Sbjct: 129 EGGIDNYLTKEKSARIK 145 >UniRef50_Q3B2H1 50S ribosomal protein L28 n=9 Tax=Chlorobiaceae RepID=RL28_PELLD Length = 72 Score = 79.0 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 34/72 (47%), Positives = 48/72 (66%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MS+VC +TGKRP GN SHA N + RF PNLH+ R W++ EKR+ +++SAK M++I Sbjct: 1 MSKVCVLTGKRPKYGNTVSHANNHRRTRFEPNLHTKRIWIDEEKRWAKVKLSAKAMKIIA 60 Query: 61 KKGIDTVLAELR 72 K G + L+ Sbjct: 61 KTGTAELAKLLK 72 >UniRef50_C9SFC9 54S ribosomal protein L24 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SFC9_VERA1 Length = 259 Score = 78.6 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Query: 11 RPVTGNNRSHALN-ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVL 68 R GNN S T R + PN+H R W + +V R+S + +R I K G+D + Sbjct: 77 RIRRGNNISSDHKVKTPRAWRPNIHRKRLWSAALGVWVRARLSLRVLRTIRKEGGLDAYV 136 Query: 69 AELRARG 75 + G Sbjct: 137 LKRPPCG 143 >UniRef50_D2UXL8 Predicted protein (Fragment) n=1 Tax=Naegleria gruberi RepID=D2UXL8_NAEGR Length = 87 Score = 78.6 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 12 PVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVLAE 70 TGN RS + TKR+++PN H + + E+ V LR ++K +R IDK G+D L E Sbjct: 13 IQTGNQRSFSERKTKRKWMPNSHWVKLYSEALDTRVQLRATSKALRCIDKSGGLDNYLIE 72 Query: 71 LRAR 74 R Sbjct: 73 TRPE 76 >UniRef50_C5FUM3 54S ribosomal protein L24 n=4 Tax=Onygenales RepID=C5FUM3_NANOT Length = 232 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 9 GKRPVTGNNRSHALNA--TKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGID 65 G + GN S N T+R + PN+ + + ++ + L+V+ + +R I+K G+D Sbjct: 71 GATIIFGNKISKGRNKGKTRRIWKPNVRKEKVYSKALDEELDLKVTHRVLRTINKVGGLD 130 Query: 66 TVLAELRARGEK 77 L + K Sbjct: 131 EYLLGDKPARIK 142 >UniRef50_C6BYE0 50S ribosomal protein L28 n=47 Tax=Bacteria RepID=RL28_DESAD Length = 70 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MS+VC + GK P TGNN SHA N TKRRF+PNL R + S +++ + +R Sbjct: 1 MSQVCDICGKGPQTGNNVSHAHNKTKRRFMPNLQKVRTQLPS-GEVKSIKACTRCIRS 57 >UniRef50_A9F3L1 50S ribosomal protein L28 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F3L1_SORC5 Length = 74 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M++ +TGKR + N SH+ TKR L N+ + R WV RFV L ++ + +R ID Sbjct: 1 MAKS-DITGKRKLLAQNVSHSNIKTKRWQLVNIQTRRVWVPELNRFVKLNLTTRDIRTID 59 Query: 61 KKGIDTVLAE 70 K G+ Sbjct: 60 KIGVVAYAKR 69 >UniRef50_UPI000150AA2C ribosomal protein L28 containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI000150AA2C Length = 289 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 S+ GK+P TG + + R + N+H W + ++ + +++S+K +R IDK Sbjct: 60 SQKGLFHGKQPKTGLQTCFSEKKSIRWWKVNVHEKYLWSDILQKKIRIQMSSKTLRTIDK 119 Query: 62 -KGIDTVLAELRARG 75 G D + + + Sbjct: 120 YGGFDNYVLLTKPKN 134 >UniRef50_B0D7Z1 Predicted protein n=2 Tax=Agaricomycetes RepID=B0D7Z1_LACBS Length = 192 Score = 77.1 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 S+ GK GNN + + ++R +LPN+ R + + ++++ + ++ I K Sbjct: 21 SQFGLFQGKNKQYGNNVPFSKHKSRRTWLPNVQQKRIPSATLGMPIRVKLTTRALKTIKK 80 Query: 62 -KGIDTVLAELRA 73 G+D + + A Sbjct: 81 HGGLDKYVEKTPA 93 >UniRef50_UPI00016B25B5 hypothetical protein cdiviTM7_00351 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B5 Length = 68 Score = 76.7 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+ C +TGK GNN S +L TKR F PNL F V+ + +T+ +S + +R + Sbjct: 1 MASRCDLTGKGKQYGNNVSFSLRRTKRVFKPNLQKKTFVVD--GQKITMTLSTQAIRTLK 58 Query: 61 KKGI 64 KKGI Sbjct: 59 KKGI 62 >UniRef50_Q0SNG2 50S ribosomal protein L28 n=23 Tax=Borrelia RepID=RL28_BORAP Length = 92 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 13/91 (14%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 M+R C++TGK+ + GNN H TKR F NL + +F++ R + Sbjct: 1 MARKCEITGKKTMFGNNVPRKGLAKKKGGARQHIGVKTKRTFKVNLINKKFFIPDLGRSI 60 Query: 48 TLRVSAKGMRVIDKKGIDTVLAELRARGEKY 78 ++VSA +R I K G+D L + + E + Sbjct: 61 NIKVSANALRSISKIGLDAFLKKNCKKIENF 91 >UniRef50_C4QZ93 54S ribosomal protein L24, mitochondrial n=1 Tax=Pichia pastoris GS115 RepID=C4QZ93_PICPG Length = 248 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 1/77 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 S G+ GN S N R++ N+H+ W E + + ++++A+ +R I+K Sbjct: 66 SNKGLYGGQFLQFGNKISEFKNKNGRKWSLNVHTKSLWSEILNKSIRVKLTARVLRTINK 125 Query: 62 -KGIDTVLAELRARGEK 77 G+D L + ++ K Sbjct: 126 EGGLDQYLLKDKSARIK 142 >UniRef50_Q4UF36 50s ribosomal subunit protein L28, putative n=3 Tax=Piroplasmida RepID=Q4UF36_THEAN Length = 429 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 3 RVCQVTGKRPVT-GNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 R C + GK T SH+ T++ NLH + W K F+ LR+S +G++ I + Sbjct: 101 RRCMLLGKMDNTKAMQISHSGVKTRKTQKLNLHWKKIWHPLRKYFIRLRISMRGLKTIKR 160 Query: 62 KGIDTVLAE 70 GI Sbjct: 161 LGIVEAARR 169 >UniRef50_B9L2A7 50S ribosomal protein L28 n=4 Tax=Chloroflexi RepID=RL28_THERP Length = 63 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 5 CQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKGI 64 C++ GK+P+ G+N SH+ T R+F PN+ + + +R+ + +R + K+ Sbjct: 4 CELCGKKPMFGHNVSHSNRKTNRKFKPNVQRVTVILNGVPK--RMRICTRCLRTLYKEAR 61 Query: 65 DT 66 + Sbjct: 62 EA 63 >UniRef50_Q54TR3 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54TR3_DICDI Length = 142 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 ++ GK + + S + T+R + PN+ + + + + + ++ +R IDK Sbjct: 20 AQRGLYGGKDIIFSDQSSFSTRKTRRTWKPNVQTKTYHSDVLDSNIRVSLTTYTIRCIDK 79 Query: 62 KG-IDTVLAELRARG 75 G D + + + Sbjct: 80 AGSFDNYIIHTKDKD 94 >UniRef50_O77465 Large ribosomal protein L28 n=5 Tax=Toxoplasma gondii RepID=O77465_TOXGO Length = 272 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 2 SRVCQVTGKRPVT-GNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 +R C + GK T NRSH+ AT + NLH R W +V LR+S KG+R I Sbjct: 144 ARRCMLLGKMDNTKARNRSHSRVATHKVQRLNLHWKRLWWPEAGYYVRLRLSVKGIRTIK 203 Query: 61 KKGIDTVLAE 70 K G+ + Sbjct: 204 KYGLQRAADK 213 >UniRef50_B6HQJ1 Pc22g07040 protein n=2 Tax=Penicillium RepID=B6HQJ1_PENCW Length = 216 Score = 74.7 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Query: 9 GKRPVTGNNRSHALN--ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGID 65 G GN S N T+R + PN+ + ++ V ++V+ + +R I K KG+D Sbjct: 69 GASIRFGNKISKGRNEGKTRRSWKPNVRRKKIESKALGESVYIKVTRRALRSIYKAKGLD 128 Query: 66 TVLAELRARGEK 77 L R K Sbjct: 129 NYLLSDRPTRLK 140 >UniRef50_A7S0T2 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7S0T2_NEMVE Length = 113 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTV 67 GK + G+ + + TKR + PN+H +++ E ++ ++ + MR IDK G D Sbjct: 25 GKGIMFGHVETFSGKKTKRAWKPNVHRKKYYSEVLEKNLSYNFTTHAMRCIDKAGGFDNY 84 Query: 68 LAELRARGEK 77 + + + Sbjct: 85 ILNTKDSKLQ 94 >UniRef50_D1AWU8 Ribosomal protein L28 n=2 Tax=Fusobacteriaceae RepID=D1AWU8_STRM9 Length = 87 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 ++C+V GK+ GN SH+ ATKR + PNL + + ++ + V +RVS K M+ + K Sbjct: 2 QICEVFGKKVGHGNLVSHSNRATKRIWRPNLQTMKLMLD--GKEVKVRVSTKAMKTLKGK 59 Query: 63 GIDTVLAELRARGEKY 78 D V L + Sbjct: 60 NEDQVKKILLENKDNL 75 >UniRef50_A8FKN5 50S ribosomal protein L28 n=47 Tax=Epsilonproteobacteria RepID=RL28_CAMJ8 Length = 64 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+RVCQ+TGK P+ GNN SHA N TKRRFLPNL + R +E +R++A +R + Sbjct: 1 MARVCQITGKGPMVGNNVSHANNKTKRRFLPNLRTVRVTLED-GTTRKMRIAASTLRTLK 59 Query: 61 KKG 63 K+ Sbjct: 60 KQN 62 >UniRef50_C7QYT4 Ribosomal protein L28 n=5 Tax=Bacteria RepID=C7QYT4_JONDD Length = 63 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+ +C V K P G++ SH+ TKRR+ PN+ R V + L V ++ Sbjct: 1 MAAICDVCAKGPSFGHSISHSHVRTKRRWNPNIQRVRAIVNGAPK--RLNVCTSCLK 55 >UniRef50_A5UQX0 Ribosomal protein L28 n=4 Tax=Roseiflexus RepID=A5UQX0_ROSS1 Length = 91 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Query: 1 MSRVCQVTGKRPVTGNNRSHALN--------ATKRRFLPNLHSHRFWVESEKRFVTLRVS 52 M+R C +TGK+ G N H + T R F PN+H H +V R +TL +S Sbjct: 1 MAR-CDLTGKKVAFGRNIRHKASGGWARRAPKTNRTFRPNVHRHTIYVPEIGRSITLNLS 59 Query: 53 AKGMRVIDKKGIDTVLAE 70 K +R I+KKG+ + + Sbjct: 60 TKALRTINKKGLIAAVRD 77 >UniRef50_B6JZM9 54S ribosomal protein L24 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JZM9_SCHJY Length = 194 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 1/76 (1%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK- 61 + G G N T R + N H+ R W ++ + L V A+ ++ I K Sbjct: 44 QRGLYGGSSTYYGKNVPDKGPKTLRTWEVNAHTKRLWSDALQMHFRLNVRARVLKTIKKD 103 Query: 62 KGIDTVLAELRARGEK 77 G+D L + K Sbjct: 104 GGLDEYLLKSTPSRLK 119 >UniRef50_Q6MDF9 50S ribosomal protein L28 n=14 Tax=Chlamydiales RepID=RL28_PARUW Length = 91 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 13/89 (14%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MS+VCQVTG++P G + TKRRF PNL R W E RF+ Sbjct: 1 MSKVCQVTGRKPTRGYKYAIRGIAKKKKGIGLKVTGKTKRRFQPNLFKKRIWFAEENRFI 60 Query: 48 TLRVSAKGMRVIDKKGIDTVLAELRARGE 76 TL++S +R ID+ G+ V+ ++RA G+ Sbjct: 61 TLKLSTAALRTIDRLGVFAVVRKMRANGQ 89 >UniRef50_D0LC20 Ribosomal protein L28 n=4 Tax=Actinobacteria (class) RepID=D0LC20_GORB4 Length = 63 Score = 72.8 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+ VC + GK P G + SH+ T RR+ PN+ S R V R V ++ Sbjct: 1 MAAVCDICGKGPGFGKSVSHSHRRTNRRWNPNIQSVRVEVAPGNRKRK-NVCTSCLK 56 >UniRef50_Q1AW97 50S ribosomal protein L28 n=97 Tax=Bacteria RepID=RL28_RUBXD Length = 71 Score = 72.1 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M++VC GK P GN RSH+L AT+RR+ PNL R + V A ++ Sbjct: 1 MAKVCYSCGKGPSFGNARSHSLRATRRRWNPNLQKVRI--REGGATKRVWVCASCLK 55 >UniRef50_B2W5T0 50S ribosomal protein L24 n=2 Tax=Pleosporineae RepID=B2W5T0_PYRTR Length = 488 Score = 72.1 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 10 KRPVTGNNRSHAL-NATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTV 67 KR GNN S T+R + PN+ + + K+ + L ++ +++ID+ G+D Sbjct: 91 KRIRFGNNVSKKTETKTRRNWKPNVLQKSLYSVALKKKIKLVLAKHILKIIDREGGLDEY 150 Query: 68 LAELRARGEK 77 L + K Sbjct: 151 LLKDSEARIK 160 >UniRef50_P0A5V7 50S ribosomal protein L28-1 n=21 Tax=Corynebacterineae RepID=RL28A_MYCBO Length = 94 Score = 71.7 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 38/59 (64%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVI 59 MS CQ+TG+ G SH+ T+RR+ PN+ +++ SE R + +RVSA+G++VI Sbjct: 1 MSARCQITGRTVGFGKAVSHSHRRTRRRWPPNIQLKAYYLPSEDRRIKVRVSAQGIKVI 59 >UniRef50_C7ND19 Ribosomal protein L28 n=4 Tax=Bacteria RepID=C7ND19_LEPBD Length = 85 Score = 71.3 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 + C+V GK GN SH+ ATKR + PNL + + V +RV K M+ + K Sbjct: 2 QRCEVFGKTVSHGNRVSHSHRATKRIWRPNLQTMLLTIN--NEEVRVRVCTKAMKTLKGK 59 Query: 63 GIDTVLAELRARGEKY 78 +D V L E Sbjct: 60 NVDQVKKILLKNKETL 75 >UniRef50_Q9ZBR5 50S ribosomal protein L28-1 n=10 Tax=Actinobacteria (class) RepID=RL28A_STRCO Length = 61 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+ C V GK P GNN SH+ T RR+ PN+ R V + + ++ Sbjct: 1 MAANCDVCGKGPGFGNNISHSHRRTSRRWNPNIQRVRTVVSGTPK--RVNACTSCIK 55 >UniRef50_Q4Z7B7 50S ribosomal subunit protein L28, putative (Fragment) n=1 Tax=Plasmodium berghei RepID=Q4Z7B7_PLABE Length = 215 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 2 SRVCQVTGKRPV-TGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 +R C + GK S + T R N R + E E RFV LRVSA+G++ I Sbjct: 85 ARRCPILGKMDNRNARKISKSGIKTHRIQKVNFVRKRIYFEEENRFVKLRVSARGLKTIK 144 Query: 61 KKGIDTVLAE 70 K G+ + Sbjct: 145 KYGLAYCAKK 154 >UniRef50_B1L9P8 50S ribosomal protein L28 n=64 Tax=Bacteria RepID=RL28_THESQ Length = 70 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 M++ C+V GK P +GN SH+ + R F PNL R + +RV ++ Sbjct: 1 MAKRCEVCGKAPRSGNTVSHSDKKSGRWFRPNLQKVRVVLPD-GTIKRMRVCTSCLKS 57 >UniRef50_Q8RDR9 50S ribosomal protein L28 n=10 Tax=Fusobacterium RepID=RL28_FUSNN Length = 85 Score = 70.9 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Query: 3 RVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK 62 + C++TG ++GN SH+ T+R + PNL V + ++V A+ ++ + Sbjct: 2 QRCEITGTGLISGNQISHSHRLTRRVWKPNLQVTTLVVN--GSPIKVKVCARTLKTLKGA 59 Query: 63 GIDTVLAELRAR 74 V+ L+A Sbjct: 60 SEVEVMRILKAN 71 >UniRef50_B9WB70 Ribosomal protein, large subunit, mitochondrial, putative n=4 Tax=Candida RepID=B9WB70_CANDC Length = 270 Score = 70.5 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Query: 19 SHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVLAELRARGEK 77 S LN T R PN+ + W E+ + + LRV+ + ++ I K G+D L + K Sbjct: 109 SEYLNKTLRVHRPNVQWTKLWSETLNKRLRLRVATRVLKTISKEGGLDQYLLKSTPARVK 168 >UniRef50_A8F7S8 50S ribosomal protein L28 n=8 Tax=Bacteria RepID=RL28_THELT Length = 65 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M++ C++ GK PV G N SH+ T+R F PNL R E T+RV + ++ Sbjct: 1 MAKRCEICGKGPVAGKNVSHSNRHTRRMFRPNLQKIRVITED-GTVRTMRVCTRCLK 56 >UniRef50_A3LRR9 Predicted protein n=3 Tax=Pichia RepID=A3LRR9_PICST Length = 266 Score = 70.5 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 19 SHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVLAELRARGEK 77 S + N R LPN+ + W E+ ++ + ++VS K ++ I K G+D L + + EK Sbjct: 106 SESGNKGLRVHLPNIQKTKLWSETLQKSIPIKVSTKVLKTITKEGGLDNYLTKNKPSREK 165 >UniRef50_UPI000023E9E7 hypothetical protein FG10744.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023E9E7 Length = 256 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Query: 11 RPVTGNNRSHA-LNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVL 68 R GN + N +R + PN+H F + + V R++ + ++ I + G+ L Sbjct: 70 RIRFGNTVAEKYNNKARRFWRPNVHVKVFKLPALDANVKTRLTLRVLKTIRREGGLQEYL 129 Query: 69 AELRARGEK 77 + + K Sbjct: 130 LKSKPARIK 138 >UniRef50_O60091 60S ribosomal protein L24, mitochondrial n=1 Tax=Schizosaccharomyces pombe RepID=RM24_SCHPO Length = 176 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Query: 9 GKRPVTGNN-RSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDT 66 G + GNN + T+R ++PN HS + + L V+++ +R IDK G+D Sbjct: 34 GSKTEAGNNKIPKFGHKTRRVWIPNGHSKWLYSNVLEEKFHLYVTSRVLRTIDKEGGLDE 93 Query: 67 VLAELRARGEK 77 L + K Sbjct: 94 YLVKSTPSRLK 104 >UniRef50_Q7RFP1 Ribosomal protein L28, putative n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RFP1_PLAYO Length = 174 Score = 69.7 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 2 SRVCQVTGKRPV-TGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 +R C + GK S + T + N R + E E RFV LRVSA+G++ I Sbjct: 34 ARRCPILGKMDNRNARKISKSGIKTHKIQRVNFVRKRIYFEEEDRFVKLRVSARGLKTIK 93 Query: 61 KKGIDTVLAE 70 K G+ + Sbjct: 94 KYGLAYCAKK 103 >UniRef50_C0QM36 50S ribosomal protein L28 n=5 Tax=Bacteria RepID=RL28_DESAH Length = 74 Score = 69.7 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 MS+ C++ GK+P+ GNN SHA N KRRF PNL + + + R + V ++ Sbjct: 1 MSKECKICGKKPMVGNNVSHAHNVNKRRFNPNLQRVKALFDGQVR--RIDVCTSCIK 55 >UniRef50_A7HDC0 50S ribosomal protein L28 n=18 Tax=Bacteria RepID=RL28_ANADF Length = 73 Score = 69.0 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+R C + GK P+ GNN SHA N +K R LPNL S R V+ + V RV + ++ Sbjct: 1 MARRCDICGKGPLVGNNVSHANNKSKTRSLPNLRSVRATVDGTVKHV--RVCTRCLK 55 >UniRef50_C7Z1A1 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7Z1A1_NECH7 Length = 262 Score = 68.6 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Query: 2 SRVCQVTGKRPVTGNNRSHA-LNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 S R GN + N +R + PN+H F + + V R++ + ++ I Sbjct: 64 SNRGLYGSARIRFGNTVAEKYNNKARRFWRPNVHVKSFHLPAVDANVKTRLTLRVLKTIR 123 Query: 61 K-KGIDTVLAELRARGEK 77 + G+ L + + K Sbjct: 124 REGGLQEYLLKSKPARLK 141 >UniRef50_C1MY26 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MY26_9CHLO Length = 208 Score = 68.6 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 22 LNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVLAELRARG 75 T+RR+ PN R + E+ V + V+ +R IDK G+D L + Sbjct: 99 NPRTRRRWKPNAQRKRLYSEALDELVRVNVTTYALRWIDKAGGLDAYLLNTTPQK 153 >UniRef50_D0WND3 Conserved domain protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WND3_9ACTO Length = 97 Score = 68.2 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 + VC++ GK P G SH+ T RR+ PN+ R V ++ + V ++ Sbjct: 34 ASVCEICGKHPSFGKRVSHSHVRTSRRWNPNIQRVRALVNGARK--RVNVCTSCLK 87 >UniRef50_A5FQ75 LSU ribosomal protein L28P n=5 Tax=Dehalococcoides RepID=A5FQ75_DEHSB Length = 62 Score = 68.2 bits (166), Expect = 9e-11, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 4 VCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 C++ GK P G+N SH+ T R ++PN+HS + V V +++ + +R K Sbjct: 2 KCEMCGKTPSFGHNVSHSKRRTNRMWMPNIHSAKIAVN--GTEVRMKLCTRCIRTQAK 57 >UniRef50_B2S2V9 50S ribosomal protein L28 n=4 Tax=Treponema RepID=RL28_TREPS Length = 78 Score = 67.4 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 M+R C + GK ++G S +++ KR + PNL + R V+ + +R+ A+ +R Sbjct: 1 MARRCGLCGKGTISGCAVSKSMHHCKRVWKPNLLAVRVVVD--GSALNMRICARCLRS 56 >UniRef50_Q6B8P2 50S ribosomal protein L28, chloroplastic n=1 Tax=Gracilaria tenuistipitata var. liui RepID=RK28_GRATL Length = 64 Score = 67.4 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M + C +TGK+ G SH+ TK+ NL + + W + +KR++ +++ K ++ + Sbjct: 1 MVKECTLTGKKSNNGYTVSHSHIRTKKIQHINLQTKKIWSDKQKRWIKIKICTKAIKSLH 60 Query: 61 K 61 K Sbjct: 61 K 61 >UniRef50_A9V9D4 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V9D4_MONBE Length = 140 Score = 67.0 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 4/78 (5%) Query: 2 SRVCQVTGKRPVTGNNRS---HALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 ++ GK+ + G + + + + + PN+ R++ + KR+ ++V+ K +R Sbjct: 21 AQRGLYAGKKVLFGVKSAEDKKSPIKSLKIWKPNVFEKRYYSDILKRYTKVKVTTKAIRC 80 Query: 59 IDK-KGIDTVLAELRARG 75 IDK G D + + Sbjct: 81 IDKAGGFDNYILMTQPEK 98 >UniRef50_D2MQH7 Ribosomal protein L28 n=1 Tax=Bulleidia extructa W1219 RepID=D2MQH7_9FIRM Length = 67 Score = 67.0 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 2/60 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVC V+GK+ + GN RSH+L AT+R++ NL V+ + TLR+SA+ ++ + Sbjct: 1 MSRVCTVSGKKALYGNKRSHSLRATRRKWNVNLQKVHMIVD--GKPQTLRISARALKTLK 58 >UniRef50_Q6CFD6 YALI0B08074p n=1 Tax=Yarrowia lipolytica RepID=Q6CFD6_YARLI Length = 299 Score = 66.7 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 1/70 (1%) Query: 9 GKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTV 67 G+ G S N T R++ PN E+ + V + + + I + G+D Sbjct: 92 GRTLGNGYRSSEFRNKTLRKWKPNAQKTTLPSEALGKNVRITTVPRVLSTIRREGGLDAY 151 Query: 68 LAELRARGEK 77 L + K Sbjct: 152 LTKDTPLRIK 161 >UniRef50_A5IXN6 50S ribosomal protein L28 n=8 Tax=Bacteria RepID=RL28_MYCAP Length = 68 Score = 66.7 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R Q+ GK P+ GN RSH++ ATKR+F NL S TLRVSAK ++ + Sbjct: 1 MARRDQLNGKGPLVGNLRSHSMIATKRKFNVNLQKITI-ANSNGTPTTLRVSAKTIKTLK 59 Query: 61 KKGI 64 +KGI Sbjct: 60 RKGI 63 >UniRef50_B2URC9 50S ribosomal protein L28 n=4 Tax=Verrucomicrobia RepID=RL28_AKKM8 Length = 87 Score = 66.7 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 13/84 (15%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 MSR+C + G P G H R PNL R WV +FV Sbjct: 1 MSRICIIRGTMPHKGRRIHRSGLAKKKGGIGRHVTKTVNRTVFPNLQEKRIWVPELGQFV 60 Query: 48 TLRVSAKGMRVIDKKGIDTVLAEL 71 +++SAK +R I+K G L ++ Sbjct: 61 KMKISAKALRTINKNGAYNTLKKV 84 >UniRef50_C0H4C3 Organelle ribosomal protein L28, putative n=6 Tax=Plasmodium RepID=C0H4C3_PLAF7 Length = 262 Score = 66.7 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 3 RVCQVTGKRPV-TGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 R C + GK S + T R NL + R + E E RF+ ++VSAKG++ I K Sbjct: 128 RRCAILGKMDNWNARKISKSGVRTHRIQRLNLINKRIFFEEENRFIKMKVSAKGLKTIKK 187 Query: 62 KGIDTVLAE 70 G+ + + Sbjct: 188 YGLAYCIKK 196 >UniRef50_B0S150 50S ribosomal protein L28 n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=RL28_FINM2 Length = 71 Score = 66.3 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MS+ C++ GK GNNRS +L ++ R + PN+ R V+ + + V + +R Sbjct: 1 MSKKCEICGKSRTFGNNRSFSLRSSNRSWAPNIRKVRALVD--GKPKRINVCTRCLRS 56 >UniRef50_Q6BSR2 DEHA2D06842p n=3 Tax=Saccharomycetales RepID=Q6BSR2_DEBHA Length = 269 Score = 66.3 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 19 SHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVLAELRARGEK 77 S + N + R PN+ + W E+ + + RVS +R I + G+D L + + K Sbjct: 110 SESKNKSLRAHKPNIVKAKLWSETLNKTIATRVSTTVLRTITREGGLDNYLLKDKPARVK 169 >UniRef50_C1A4I8 50S ribosomal protein L28 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4I8_GEMAT Length = 73 Score = 65.9 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 4 VCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGM 56 C K GNN SHA N T+R + PNL R + + ++V + + Sbjct: 7 RCYHCDKGVAFGNNVSHANNKTRRTWKPNLQVVRTL--EAGKIIKVKVCTRCL 57 >UniRef50_C6D4E7 Ribosomal protein L28 n=4 Tax=Firmicutes RepID=C6D4E7_PAESJ Length = 62 Score = 65.9 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MSR C +TGK P TGN+ SHA N +R + N+ R V+ + + VS + ++ Sbjct: 1 MSRKCFITGKSPGTGNHVSHANNKNRRSWGVNVQKVRILVD--GKPKRVYVSTRALKS 56 >UniRef50_B9E1F2 50S ribosomal protein L28 n=22 Tax=Clostridia RepID=RL28_CLOK1 Length = 63 Score = 65.5 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MS+ C++ GK V G SH+ +KR + PN+ + V+ R T+ V A+ +R Sbjct: 1 MSKKCEICGKGVVFGVQYSHSHRQSKRTWSPNIRKIKAIVKGTPR--TIHVCARCLRS 56 >UniRef50_B2KAU3 50S ribosomal protein L28 n=4 Tax=Bacteria RepID=RL28_ELUMP Length = 64 Score = 65.1 bits (158), Expect = 7e-10, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MS CQ+ GK VTG + SH+ TKR F PNL + +E + T V K ++ Sbjct: 1 MSYKCQLCGKGSVTGGSYSHSHRNTKRTFRPNLQKQKVVLE--GKTQTAYVCTKCIKS 56 >UniRef50_B1AIJ7 50S ribosomal protein L28 n=24 Tax=Bacteria RepID=RL28_UREP2 Length = 64 Score = 64.7 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M++ Q+TGK P++GN RSHA+N +KRR+ NL E+ + + VSAK ++ + Sbjct: 1 MAKRDQLTGKGPLSGNTRSHAMNHSKRRWNVNLQKATIKTENGSQ--RVLVSAKTLKTLK 58 Query: 61 KKGIDT 66 K + Sbjct: 59 KHNLLA 64 >UniRef50_B5YNJ8 RK28, ribosomal protein 28, 50S large ribosomal subunit, chloroplast (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YNJ8_THAPS Length = 77 Score = 64.7 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Query: 3 RVCQVTGKRPVT-GNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK 61 R C + GK + + + NL RF+ + R V LR+S KG++ ++K Sbjct: 1 RACDLLGKTANRKARVVTFSHKRIHKVQQVNLQWKRFYSDDLGRQVRLRLSTKGIKTVNK 60 Query: 62 KG-IDTVLAE 70 G ID + Sbjct: 61 YGSIDAAAKK 70 >UniRef50_B5Y795 50S ribosomal protein L28 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=RL28_COPPD Length = 63 Score = 64.3 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+RVC V GK G+N SH+ T RR++ NL + T V K ++ Sbjct: 1 MARVCSVCGKGTTFGHNVSHSNRRTNRRWVANLKRVHGRFPD-GKVRTAYVCVKCLK 56 >UniRef50_Q01CK5 50S ribosomal protein L28 (ISS) n=2 Tax=Eukaryota RepID=Q01CK5_OSTTA Length = 290 Score = 64.3 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 24/95 (25%) Query: 1 MS-RVCQVTGKRPVTGNNRSHALNATKRRFLPNLH-SHRFWVES---------------- 42 MS R C +TGK+ G S + K NL R + Sbjct: 90 MSGRKCMLTGKKANNGRTISFSHIRNKTLQQVNLQVRTRGESDGSLGRVARDFRRERLTL 149 Query: 43 ------EKRFVTLRVSAKGMRVIDKKGIDTVLAEL 71 R+V LR+S ++ ++K G++ + Sbjct: 150 TTCFRTIARYVRLRISTNAIKTLNKLGLEEMAKRA 184 >UniRef50_B5YHT7 Ribosomal protein L28 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHT7_THEYD Length = 62 Score = 64.0 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 5 CQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 C V GK+ V GNN SHA N TKR F PNL + E + + V + +R Sbjct: 4 CYVCGKKKVIGNNVSHANNKTKRYFFPNLQRMKIITERGPQ--RVHVCTRCLRS 55 >UniRef50_C9M7F1 Ribosomal protein L28 n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7F1_9BACT Length = 68 Score = 63.6 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 MS+VC G+ P TGN SH+ T+RR+ NL + R + +++ A +R Sbjct: 1 MSKVCDCCGRGPATGNQISHSHRRTRRRWQINLQNVRVDL-GAGETRKMKICAHCLRS 57 >UniRef50_B9Y7G9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7G9_9FIRM Length = 64 Score = 63.6 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 41/60 (68%), Gaps = 2/60 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVC V+GK+ ++GN RSH+L+A++R++ NL + V+ + +R+SA+ ++ + Sbjct: 1 MSRVCAVSGKKALSGNKRSHSLHASRRKWNVNLQKVKVMVD--GKPQRIRISARALKTLK 58 >UniRef50_Q2SS02 50S ribosomal protein L28 n=20 Tax=Bacteria RepID=RL28_MYCCT Length = 65 Score = 62.4 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R +TGK ++G +RSHALNATKR++ NL R + ++VSA+ +R + Sbjct: 1 MARRDALTGKSALSGQSRSHALNATKRKWNLNLQKVRVM-DENGSVFNIKVSARTLRTLK 59 Query: 61 KK 62 K+ Sbjct: 60 KQ 61 >UniRef50_B2A2L1 50S ribosomal protein L28 n=19 Tax=Bacteria RepID=RL28_NATTJ Length = 63 Score = 62.0 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 M+ +C++ GK +G + SH+ TKR++ N+ + V+ R ++V + ++ Sbjct: 1 MANLCEICGKGNNSGASVSHSNKKTKRKWKGNIQKLKAMVD--GRPKKVKVCTQCIK 55 >UniRef50_B1C5T0 Putative uncharacterized protein (Fragment) n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5T0_9FIRM Length = 63 Score = 62.0 bits (150), Expect = 6e-09, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRF 46 M + C V GK+ +G+ SH+ TKR + PNL R + + Sbjct: 18 MPKECYVCGKKITSGHQVSHSNIHTKRTWKPNLKKVRIVENNTAKN 63 >UniRef50_A5DV86 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DV86_LODEL Length = 283 Score = 61.7 bits (149), Expect = 7e-09, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 1 MSR--VCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 M R G++ S LN R PN + W E+ +R +RVS K +R Sbjct: 104 MKRQNRGLYHGRQRKKSKTCSEFLNKNLRAHKPNRQVAKIWSEAMQRQFKVRVSTKFLRT 163 Query: 59 IDK-KGIDTVLAELRARGEK 77 + K G+D L + K Sbjct: 164 MTKDGGLDQYLLKSTPGRIK 183 >UniRef50_C5J7C0 50S ribosomal protein L28 n=2 Tax=Mycoplasma RepID=C5J7C0_MYCCR Length = 64 Score = 60.9 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M+R +T K P++GNNRSHALNATKR+F NL S + + L+VSAK + + Sbjct: 1 MARRDDLTFKGPLSGNNRSHALNATKRKFNLNLQKVVITTSS-GQKIKLKVSAKTKKTLR 59 Query: 61 KKG 63 K+G Sbjct: 60 KQG 62 >UniRef50_C0QUB7 50S ribosomal protein L28 n=26 Tax=Bacteria RepID=RL28_PERMH Length = 64 Score = 60.1 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 4 VCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 VCQ+ GK+ GN +H+ TKR + PNL + + + V AK ++ Sbjct: 3 VCQICGKKTAHGNRVAHSATTTKRTWKPNLQKVKAVLPD-GTTKKIYVCAKCLK 55 >UniRef50_A4XIU8 LSU ribosomal protein L28P n=4 Tax=Bacteria RepID=A4XIU8_CALS8 Length = 75 Score = 60.1 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 5 CQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMR 57 C++ K+ GN SH+ ++R + PN+ R + + + V ++ Sbjct: 18 CEICNKKVSFGNKVSHSNKKSRRTWKPNVKKIRVIIN--GQRKRIYVCTSCIK 68 >UniRef50_C7PZL8 Ribosomal protein L28 n=2 Tax=Actinomycetales RepID=C7PZL8_CATAD Length = 73 Score = 59.3 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 11/66 (16%) Query: 1 MSRVCQVTGKRPVTGNNRSHALN---------ATKRRFLPNLHSHRFWVESEKRFVTLRV 51 MS+ C V GK P GN + + + R F PN+ R V+ R V L+V Sbjct: 1 MSQRCDVCGKEPSFGNQVARLGHNAQRRRVLGRSARMFRPNIQPVRATVD--GRPVKLKV 58 Query: 52 SAKGMR 57 ++ Sbjct: 59 CTACLK 64 >UniRef50_D1CCP4 Ribosomal protein L28 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCP4_THET1 Length = 73 Score = 59.0 bits (142), Expect = 5e-08, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 11/70 (15%) Query: 1 MSRVCQVTGKRPVTGNNRSHAL--------NATKRRFLPNLHSHRFWVESEKRFVTLRVS 52 M+R C+V GK+ G + + T R F PN+H + V + + Sbjct: 1 MAR-CEVCGKKTQFGRSIQYHHGGKWARRAQKTNRPFKPNVHRQTVMLN--GELVKIHIC 57 Query: 53 AKGMRVIDKK 62 + +R + KK Sbjct: 58 TRCLRTLAKK 67 >UniRef50_C4Z044 50S ribosomal protein L28 n=28 Tax=Bacteria RepID=RL28_EUBE2 Length = 61 Score = 58.2 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 M++ C + K P GN SH+ + + + N+ S + V + + V +R Sbjct: 1 MAK-CAICEKGPHFGNAVSHSHRRSNKVWNANVKSVKVKVNGNAK--KMYVCTSCLRS 55 >UniRef50_A2RHS3 50S ribosomal protein L28 n=266 Tax=Bacteria RepID=RL28_LACLM Length = 64 Score = 57.8 bits (139), Expect = 1e-07, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVI 59 MS+ C TG++ V+ NNRSHA+N TKR PNL E + V SAK ++ + Sbjct: 1 MSKECYFTGRKTVSSNNRSHAMNQTKRVVKPNLQKVTILENGELKTV--WASAKALKKL 57 >UniRef50_P75171 50S ribosomal protein L28 n=1 Tax=Mycoplasma pneumoniae RepID=RL28_MYCPN Length = 65 Score = 57.8 bits (139), Expect = 1e-07, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M++ Q+T + P+ GNNRSH+ T+R++ NL + + + VS + +R + Sbjct: 1 MAKKDQLTLRGPLYGNNRSHSKTITRRKWNVNLQPCKVKTAD-GKTTRILVSTRTLRTLK 59 Query: 61 KKG 63 K Sbjct: 60 KHN 62 >UniRef50_Q85G82 50S ribosomal protein L28, chloroplastic n=1 Tax=Cyanidioschyzon merolae RepID=RK28_CYAME Length = 75 Score = 55.9 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 MSRVC +T K+ +++ RR NL R ++ +V L++S K ++ + Sbjct: 1 MSRVCPLTLKKCNHAFRVTYSHKRNHRRQFVNLQKKRIFIN--NEWVVLKISTKAIKTLK 58 Query: 61 KKGI 64 K + Sbjct: 59 SKTL 62 >UniRef50_C6UN83 Putative 50S ribosomal subunit protein L28 n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN83_HODCD Length = 91 Score = 54.7 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%) Query: 11 RPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG 63 +P+ G SH+ TKR+F PN + W RFV+ + A+ +R + K G Sbjct: 9 KPLFGARVSHSNKKTKRKFKPNAVKTKLWSLVLNRFVSFKARARFVREVRKYG 61 >UniRef50_D1R4Y7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4Y7_9CHLA Length = 94 Score = 53.9 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 16/90 (17%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MS+VC VTGK+ G + TKRRF NL + W+ E RFV Sbjct: 1 MSKVCPVTGKKTTRGFKYAIRGIAKKKKGIGLKVTGKTKRRFKANLADRKLWLAEENRFV 60 Query: 48 TL-RVSAKGMRVIDKK--GIDTVLAELRAR 74 ++ +S G+R ++KK G+ + ++R++ Sbjct: 61 SIPNLSISGLRTLEKKEGGVAAYVRQVRSQ 90 >UniRef50_UPI0001924E92 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001924E92 Length = 172 Score = 53.9 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 1/69 (1%) Query: 7 VTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID-KKGID 65 G +G + + TKR + PN+ + + V + K +R ID G D Sbjct: 36 WHGAGVKSGFIETFSKKKTKRFWKPNVFEREYHSDLLNETVCYTFTMKAVRAIDYAGGFD 95 Query: 66 TVLAELRAR 74 + Sbjct: 96 NYILRTPDN 104 >UniRef50_Q03W24 50S ribosomal protein L28 n=6 Tax=Leuconostocaceae RepID=RL28_LEUMM Length = 66 Score = 52.8 bits (126), Expect = 4e-06, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 M++ +TG R GN RSHALN+++R + PNL + + ++A+ ++ Sbjct: 1 MAK-DAITGARTRFGNQRSHALNSSRRSWKPNLQKVTVKINGAA-PKKVYLTARTLKAGL 58 Query: 61 KKG 63 K G Sbjct: 59 KNG 61 >UniRef50_B3QZS8 50S ribosomal protein L28 n=1 Tax=Candidatus Phytoplasma mali AT RepID=RL28_PHYMT Length = 62 Score = 51.6 bits (123), Expect = 8e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 4 VCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID 60 C ++ K + GN RSH++NA KR + NL S R + + +++SA+ ++ ++ Sbjct: 3 RCYISQKSTLFGNKRSHSMNAIKRIWKTNLQSIRI-EDENGKIKKIKISARSLKKLN 58 >UniRef50_Q8IKR3 Mitochondrial ribosomal protein L28, putative n=11 Tax=Apicomplexa RepID=Q8IKR3_PLAF7 Length = 281 Score = 49.3 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 22/63 (34%), Gaps = 2/63 (3%) Query: 17 NRSHALNATKRRFLPNLHSHRFWVESEKRFV-TLRVSAKGMRVI-DKKGIDTVLAELRAR 74 S++L T+ + PN+ + +R++ + + D G D + Sbjct: 60 KVSYSLKKTRIKLKPNVFKKHIVSNELNTIIPNVRLTTSALHAMDDAGGFDNYILRTPPE 119 Query: 75 GEK 77 + Sbjct: 120 ELR 122 >UniRef50_B9XT04 Ribosomal protein L28 n=1 Tax=bacterium Ellin514 RepID=B9XT04_9BACT Length = 88 Score = 47.8 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 13/66 (19%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 M+R+C++TG P+ G++ +H TKRRF+PNL + + E R++ Sbjct: 1 MARICELTGTGPIKGSHIWRSGKAKKKGGIGTHVTAITKRRFMPNLQRVKAVINGEVRYI 60 Query: 48 TLRVSA 53 + SA Sbjct: 61 RVTASA 66 >UniRef50_D2R413 Ribosomal protein L28 n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R413_9PLAN Length = 92 Score = 47.4 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 14/70 (20%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 M+ C+ KR GN + T+R+F PNL S + + Sbjct: 1 MAYTCEFCDKRASRGNQVETRGKAKYLGGVGTKITGITRRQFKPNLQSVKITTPN-GTNT 59 Query: 48 TLRVSAKGMR 57 T+R+ + ++ Sbjct: 60 TVRICTRCLK 69 >UniRef50_Q13084 39S ribosomal protein L28, mitochondrial n=36 Tax=Euteleostomi RepID=RM28_HUMAN Length = 256 Score = 46.6 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKR---RFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 S+ G+ + G ++ +KR + P L F+ E + T+ V+ + + + Sbjct: 75 SQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDL 134 Query: 59 IDK-KGIDTVLAELRARG 75 ID+ G+D + + Sbjct: 135 IDEAYGLDFYILKTPKED 152 >UniRef50_B8CWU5 50S ribosomal protein L28 n=9 Tax=Bacteria RepID=RL28_HALOH Length = 76 Score = 46.2 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 15/71 (21%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MSRVC++ GK V N + H ++RR PNL + V+ R Sbjct: 1 MSRVCEICGKGTVKANRITRRGKAKKEGGVGKHITKTSRRRQKPNLVKVKAIVD--GRPK 58 Query: 48 TLRVSAKGMRV 58 ++V K ++ Sbjct: 59 RIKVCTKCLKS 69 >UniRef50_A6DKH3 Ribosomal protein L28 n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH3_9BACT Length = 74 Score = 44.7 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 15/71 (21%) Query: 1 MSRVCQVTGKRPVTGNNRSHAL-------------NATKRRFLPNLHSHRFWVESEKRFV 47 M++ C GK+P G H KR F PN+ + + V Sbjct: 1 MAKECHFCGKKPHVGGTIVHRGISKKAGGIGLKLVKTNKRVFKPNIQKVKAKINGTACTV 60 Query: 48 TLRVSAKGMRV 58 +R Sbjct: 61 --NACTACIRT 69 >UniRef50_Q4TDV8 Chromosome undetermined SCAF6006, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4TDV8_TETNG Length = 157 Score = 44.3 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 26 KRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVID-KKGIDTVLAELRARG 75 K+ + P L + E T+ V+A+ + +ID G D + + Sbjct: 6 KKTWKPQLFKRELYSEILDHKFTITVTARTLDLIDAAYGFDFYILKTPKED 56 >UniRef50_B3SAW5 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SAW5_TRIAD Length = 254 Score = 43.5 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 29 FLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKG-IDTVLAELRAR 74 + PN+ + + + + + + + + ++ I++ G +D + + Sbjct: 47 WHPNVQTMKLFSDILDQTLRVPTTMSALKQIERAGSLDNYILRTPDK 93 >UniRef50_O76606 Putative uncharacterized protein T25D3.2 n=3 Tax=Chromadorea RepID=O76606_CAEEL Length = 310 Score = 43.5 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 27 RRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKK-GIDTVLAELRA 73 + F P L + + E +++ + V+ + MR+ID+ G+D + E + Sbjct: 131 KLFFPALKNVVLYSEILDKYIKVTVTERAMRLIDEHFGLDYYILESKE 178 >UniRef50_A9KPH7 50S ribosomal protein L28 n=12 Tax=Bacteria RepID=RL28_CLOPH Length = 65 Score = 43.5 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 7/61 (11%) Query: 1 MSRVCQVTGKRPVTGNNRSHALN----ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGM 56 M++ C + K G SH+ + + + + N+ S R V + + V + Sbjct: 1 MAK-CAICDKGAHFGKVVSHSRSQVSGRSNKMWKSNVKSVRIKVNGGTQ--KMYVCTSCL 57 Query: 57 R 57 R Sbjct: 58 R 58 >UniRef50_B1ZYG2 50S ribosomal protein L28 n=2 Tax=Verrucomicrobia RepID=RL28_OPITP Length = 76 Score = 42.4 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 14/70 (20%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 M+R+C +TG+RPV G+ +H TKR+F PNL R + + Sbjct: 1 MARICAITGRRPVKGSIINRKGQSKKSGGIGTHVTTITKRKFRPNLQRIRVKLPNGGTK- 59 Query: 48 TLRVSAKGMR 57 + VS K ++ Sbjct: 60 RMLVSVKALK 69 >UniRef50_D1N9H5 Ribosomal protein L28 n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9H5_9BACT Length = 75 Score = 41.6 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 15/71 (21%) Query: 1 MSRVCQVTGKRPVTGNNRS-------------HALNATKRRFLPNLHSHRFWVESEKRFV 47 MS+ C++ GK G + H + KR F NL + R Sbjct: 1 MSKFCEMCGKGKAHGGCITRKGLAKKAGGIGMHVVKNVKRTFEANLQNVRI--NEGGTVK 58 Query: 48 TLRVSAKGMRV 58 T+++ + +R Sbjct: 59 TVKMCVRCIRT 69 >UniRef50_Q4N2X7 Putative uncharacterized protein n=1 Tax=Theileria parva RepID=Q4N2X7_THEPA Length = 281 Score = 41.2 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 2/63 (3%) Query: 17 NRSHALNATKRRFLPNLHSHRFWVESEKRFV-TLRVSAKGMRVI-DKKGIDTVLAELRAR 74 S++L T+ + P + F + V +RV+ + I G D + Sbjct: 94 KVSYSLKKTRIKLKPLVFKKDFESKLLNTTVPNVRVTTSALHAITSSGGFDNYILNTFPE 153 Query: 75 GEK 77 + Sbjct: 154 QLR 156 >UniRef50_C1BSH9 39S ribosomal protein L28, mitochondrial n=2 Tax=Caligidae RepID=C1BSH9_9MAXI Length = 295 Score = 40.5 bits (94), Expect = 0.018, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 29 FLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDK-KGIDTVLAELRAR 74 + P LH + +++ + V+ +G++++DK G D L Sbjct: 124 WWPKLHLAVVYSRVLDKYIEMPVTRRGLKLVDKAHGFDNYLLRTPVN 170 >UniRef50_Q1J0Z7 50S ribosomal protein L28 n=4 Tax=Deinococcus RepID=RL28_DEIGD Length = 84 Score = 40.5 bits (94), Expect = 0.019, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 15/75 (20%) Query: 1 MSRVCQVTGKRPVTGNNR-------------SHALNATKRRFLPNLHSHRFWVESEKRFV 47 MS C +TGK+ + N TKR NLH + Sbjct: 1 MSHQCYLTGKKTMVVNAVIRRGKARREGGVGRKTTGITKRVQKANLHKK--LIRENGVLK 58 Query: 48 TLRVSAKGMRVIDKK 62 + +SA +R ++K Sbjct: 59 RVWLSAAALRTLNKG 73 >UniRef50_C1XV04 LSU ribosomal protein L28P n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XV04_9DEIN Length = 103 Score = 40.1 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 15/67 (22%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNA-------------TKRRFLPNLHSHRFWVESEKRFV 47 MSR+C+++GKRP N+ + A +KR PNL V + + Sbjct: 6 MSRICEISGKRPTVVNSVTRRGKAKADGGVGKKTTGISKRWQYPNLQKVNITVA--GQEI 63 Query: 48 TLRVSAK 54 T RV+ Sbjct: 64 TFRVATS 70 >UniRef50_UPI000180C601 PREDICTED: similar to mitochondrial ribosomal protein L28 n=1 Tax=Ciona intestinalis RepID=UPI000180C601 Length = 285 Score = 39.3 bits (91), Expect = 0.040, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 4/76 (5%) Query: 2 SRVCQVTGKRPVTGNNRSHALNATKR---RFLPNLHSHRFWVESEKRFVTLRVSAKGMRV 58 SR G+ V G + +++ + P L + + E + V+ + + Sbjct: 102 SREGLWGGEGIVWGFKYARGKKMSRKYYKVWKPQLFTRTLYSEILDKKFKTTVTGLTLDL 161 Query: 59 IDK-KGIDTVLAELRA 73 ID+ G D + + Sbjct: 162 IDEAYGFDFFILNTSS 177 >UniRef50_Q72G84 50S ribosomal protein L28 n=5 Tax=Deinococci RepID=RL28_THET2 Length = 98 Score = 39.3 bits (91), Expect = 0.040, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 13/65 (20%) Query: 1 MSRVCQVTGKRPVTGNNRSHALNA-------------TKRRFLPNLHSHRFWVESEKRFV 47 MS+VC+++GKRP+ N+ A +KRR PNL R V ++ Sbjct: 1 MSKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQEITF 60 Query: 48 TLRVS 52 + S Sbjct: 61 RVAAS 65 >UniRef50_Q5D9B2 SJCHGC01033 protein n=3 Tax=Schistosoma RepID=Q5D9B2_SCHJA Length = 260 Score = 38.9 bits (90), Expect = 0.044, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 2/78 (2%) Query: 2 SRVCQVTGKRPVTGNNRSHALN-ATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVI- 59 S+ C G+ + G + + P L + F+ E R++ + VS ++ I Sbjct: 69 SQKCLWGGEGIIQGYWEKKNQRPKFPKAWRPVLMENLFYSEILDRWMVIIVSDSALKQIE 128 Query: 60 DKKGIDTVLAELRARGEK 77 + G D + K Sbjct: 129 NAGGFDFYILSTPQSKLK 146 >UniRef50_B7Q818 39S ribosomal protein L28, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q818_IXOSC Length = 270 Score = 38.5 bits (89), Expect = 0.067, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Query: 3 RVCQ---VTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVI 59 + CQ G+ ++G R +K F P L + E +++ + ++ + + +I Sbjct: 73 KECQQGIWGGEGIISGYRRRKYGRYSK-YFTPILKRGVVYSEILDKYMRVTLTERTVLLI 131 Query: 60 DKK-GIDTVLAELRARGEK 77 ++ G D + + + K Sbjct: 132 NQNFGFDQYILKTPVQDLK 150 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.171 0.560 Lambda K H 0.267 0.0528 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 561,220,694 Number of Sequences: 3077464 Number of extensions: 23080159 Number of successful extensions: 52126 Number of sequences better than 1.0e-01: 159 Number of HSP's better than 0.1 without gapping: 338 Number of HSP's successfully gapped in prelim test: 41 Number of HSP's that attempted gapping in prelim test: 51625 Number of HSP's gapped (non-prelim): 382 length of query: 78 length of database: 1,040,396,356 effective HSP length: 49 effective length of query: 29 effective length of database: 889,600,620 effective search space: 25798417980 effective search space used: 25798417980 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 88 (38.1 bits)