BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (258 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B0TDM7 Imidazole glycerol phosphate synthase subunit hi... 269 6e-71 UniRef50_B2V9M8 Imidazole glycerol phosphate synthase subunit hi... 266 5e-70 UniRef50_C7P985 Imidazole glycerol phosphate synthase subunit hi... 262 8e-69 UniRef50_C4L176 Imidazole glycerol phosphate synthase subunit hi... 261 2e-68 UniRef50_A6UUZ9 Imidazole glycerol phosphate synthase subunit hi... 260 5e-68 UniRef50_C9KKW6 Imidazole glycerol phosphate synthase subunit hi... 259 9e-68 UniRef50_Q12UY6 Imidazole glycerol phosphate synthase subunit hi... 258 2e-67 UniRef50_B9DIP1 Imidazole glycerol phosphate synthase subunit hi... 252 6e-66 UniRef50_B5YIB7 Imidazole glycerol phosphate synthase subunit hi... 249 5e-65 UniRef50_Q8DJN7 Imidazole glycerol phosphate synthase subunit hi... 246 5e-64 UniRef50_B8FFL4 Imidazole glycerol phosphate synthase subunit hi... 243 4e-63 UniRef50_Q18JI3 Imidazole glycerol phosphate synthase subunit hi... 241 2e-62 UniRef50_C0RFX3 Imidazole glycerol phosphate synthase subunit hi... 241 2e-62 UniRef50_C4FS06 Putative uncharacterized protein n=1 Tax=Veillon... 240 3e-62 UniRef50_A5FQU7 Histidine biosynthesis protein n=5 Tax=Dehalococ... 238 9e-62 UniRef50_A0AG16 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 237 2e-61 UniRef50_C4Z0A8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 237 4e-61 UniRef50_Q2P3J8 Imidazole glycerol phosphate synthase subunit hi... 237 4e-61 UniRef50_B8D115 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 236 6e-61 UniRef50_P74106 Imidazole glycerol phosphate synthase subunit hi... 235 9e-61 UniRef50_C9RKR3 Imidazole glycerol phosphate synthase subunit hi... 235 1e-60 UniRef50_A8M910 Imidazole glycerol phosphate synthase subunit hi... 235 1e-60 UniRef50_C4ZLR4 Imidazole glycerol phosphate synthase subunit hi... 235 1e-60 UniRef50_Q2SCV5 Imidazoleglycerol-phosphate synthase n=1 Tax=Hah... 234 2e-60 UniRef50_Q1PWX6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 234 2e-60 UniRef50_C7RAI6 Imidazole glycerol phosphate synthase subunit hi... 232 7e-60 UniRef50_Q3ZYM9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 232 9e-60 UniRef50_B5YIB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 232 1e-59 UniRef50_A5INE6 Imidazole glycerol phosphate synthase subunit hi... 232 1e-59 UniRef50_C8PKX5 Imidazole glycerol phosphate synthase subunit hi... 231 2e-59 UniRef50_C0Z6P5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 231 2e-59 UniRef50_Q12WC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 230 3e-59 UniRef50_A2BQT3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 230 3e-59 UniRef50_B1I557 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 230 4e-59 UniRef50_B4S4Z8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 230 5e-59 UniRef50_B0TY42 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 228 1e-58 UniRef50_C0QRW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 227 3e-58 UniRef50_Q02YX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 225 1e-57 UniRef50_B3DY29 Phosphoribosylformimino-5-aminoimidazole carboxa... 225 1e-57 UniRef50_A1KJ21 Imidazole glycerol phosphate synthase subunit hi... 225 1e-57 UniRef50_Q0IDQ9 Imidazole glycerol phosphate synthase subunit hi... 224 2e-57 UniRef50_B2V6T1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 224 3e-57 UniRef50_D2RTG3 Phosphoribosylformimino-5-aminoimidazole carboxa... 223 3e-57 UniRef50_Q2JK82 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 223 3e-57 UniRef50_Q1R079 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 223 3e-57 UniRef50_Q2LTH2 Imidazole glycerol phosphate synthase, cyclase s... 223 3e-57 UniRef50_Q18C71 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 223 4e-57 UniRef50_C6UMW6 Putative imidazoleglycerol phosphate synthase, c... 223 5e-57 UniRef50_C5BV99 Imidazole glycerol phosphate synthase subunit hi... 223 6e-57 UniRef50_P62353 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 222 7e-57 UniRef50_A3CNT1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 222 7e-57 UniRef50_B8FP23 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 222 8e-57 UniRef50_D1CF74 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 222 1e-56 UniRef50_Q65EG2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 221 2e-56 UniRef50_Q8DMA5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 221 2e-56 UniRef50_Q4FNT6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 221 2e-56 UniRef50_A2C5V2 Imidazoleglycerol-phosphate synthase n=2 Tax=Pro... 221 2e-56 UniRef50_A4G9I7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 220 4e-56 UniRef50_D0MJ01 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 220 4e-56 UniRef50_B3QRR1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 219 7e-56 UniRef50_Q2S296 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 219 7e-56 UniRef50_A4XL21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 218 2e-55 UniRef50_Q3AD49 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 217 2e-55 UniRef50_C0W9Y4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 217 2e-55 UniRef50_D1B9F8 Histidine biosynthesis protein n=1 Tax=Thermanae... 217 2e-55 UniRef50_Q3SPZ7 Histidine biosynthesis n=1 Tax=Nitrobacter winog... 217 2e-55 UniRef50_A9A5X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 217 3e-55 UniRef50_B3E201 Histidine biosynthesis protein n=1 Tax=Geobacter... 217 4e-55 UniRef50_B6BGE0 Imidazole glycerol phosphate synthase, cyclase s... 217 4e-55 UniRef50_A8ESN1 Imidazoleglycerol phosphate synthase, cyclase su... 216 5e-55 UniRef50_A7I1W6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 216 5e-55 UniRef50_Q47XB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 216 6e-55 UniRef50_D1U7I5 Histidine biosynthesis protein n=1 Tax=Desulfovi... 216 7e-55 UniRef50_B8FJR2 Histidine biosynthesis protein n=1 Tax=Desulfati... 215 8e-55 UniRef50_P72139 Putative imidazole glycerol phosphate synthase s... 215 1e-54 UniRef50_B2A6X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 215 2e-54 UniRef50_Q0AW40 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 214 2e-54 UniRef50_Q6KZD5 Histidine biosynthesis protein HisF n=1 Tax=Picr... 214 2e-54 UniRef50_A7FJH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 214 2e-54 UniRef50_A0M284 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 214 2e-54 UniRef50_A6Q4V9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 214 2e-54 UniRef50_Q18DL2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 213 3e-54 UniRef50_A3EUM5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 213 4e-54 UniRef50_C9KKW7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 213 4e-54 UniRef50_A1W0U8 Putative imidazole glycerol phosphate synthase s... 213 4e-54 UniRef50_A3N3W4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 212 7e-54 UniRef50_P62356 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 212 1e-53 UniRef50_B8J249 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 211 2e-53 UniRef50_B0K628 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 211 2e-53 UniRef50_C2BYH3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 211 2e-53 UniRef50_B9E171 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 211 2e-53 UniRef50_C5BRY3 Imidazoleglycerol phosphate synthase, cyclase su... 211 2e-53 UniRef50_D0LIZ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 210 3e-53 UniRef50_B1H0E7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 210 3e-53 UniRef50_B0R4B2 Imidazole glycerol phosphate synthase subunit hi... 210 4e-53 UniRef50_B1CBX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 209 6e-53 UniRef50_C7PAV4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 209 7e-53 UniRef50_UPI00016BFDF6 putative 1-(5-phosphoribosyl)-5- n=1 Tax=... 208 1e-52 UniRef50_Q4JW54 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 208 2e-52 UniRef50_A3CTR9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 208 2e-52 UniRef50_A6T0B3 Imidazoleglycerol phosphate synthase n=4 Tax=Pro... 207 3e-52 UniRef50_A6LDI6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 207 4e-52 UniRef50_Q58927 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 207 5e-52 UniRef50_UPI0001C3165B phosphoribosylformimino-5-aminoimidazole ... 206 5e-52 UniRef50_UPI0001C41EB6 phosphoribosylformimino-5- aminoimidazole... 206 6e-52 UniRef50_C0BNI2 Histidine biosynthesis protein n=1 Tax=Flavobact... 206 6e-52 UniRef50_Q7V958 Putative imidazole glycerol phosphate synthase s... 206 7e-52 UniRef50_B2UX21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 206 8e-52 UniRef50_B4SDB6 Histidine biosynthesis protein n=9 Tax=Bacteria ... 205 9e-52 UniRef50_Q7UG70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 205 1e-51 UniRef50_Q039B4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 205 1e-51 UniRef50_D2Q1W2 Bifunctional HisA/TrpF protein n=2 Tax=Actinomyc... 205 2e-51 UniRef50_B8IPH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 204 2e-51 UniRef50_C9RH20 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 204 2e-51 UniRef50_D0RQP1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 204 2e-51 UniRef50_B9KXJ4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 204 2e-51 UniRef50_A8S9L9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 204 2e-51 UniRef50_C7TCJ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 204 3e-51 UniRef50_B0T799 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 204 3e-51 UniRef50_A2C1S3 Imidazole glycerol-phosphate synthase n=1 Tax=Pr... 203 3e-51 UniRef50_A7H5V3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 203 4e-51 UniRef50_Q88UE2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 202 7e-51 UniRef50_C0QWR6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 202 1e-50 UniRef50_A1ZT22 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 202 1e-50 UniRef50_D1BQK4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 201 2e-50 UniRef50_B4W8G6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 200 3e-50 UniRef50_Q7MPK7 Putative imidazole glycerol phosphate synthase s... 200 4e-50 UniRef50_P33734 Cyclase n=51 Tax=cellular organisms RepID=HIS5_Y... 200 5e-50 UniRef50_C1CY68 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 200 5e-50 UniRef50_C7H029 Imidazoleglycerol phosphate synthase, cyclase su... 200 5e-50 UniRef50_C1TLB3 Phosphoribosylformimino-5-aminoimidazole carboxa... 199 6e-50 UniRef50_Q7N8D1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 199 6e-50 UniRef50_Q5WX95 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 199 6e-50 UniRef50_C4G189 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 198 1e-49 UniRef50_C5E2I9 KLTH0H05368p n=17 Tax=cellular organisms RepID=C... 198 1e-49 UniRef50_D0CY30 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 198 2e-49 UniRef50_C7GBG4 Imidazoleglycerol phosphate synthase, cyclase su... 198 2e-49 UniRef50_A6C5Q1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 197 2e-49 UniRef50_B2I5X7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 197 3e-49 UniRef50_B1YL10 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 197 3e-49 UniRef50_Q3ICF4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 197 3e-49 UniRef50_C8WPG6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 197 4e-49 UniRef50_Q1IWD2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 197 5e-49 UniRef50_B0SDS6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 196 7e-49 UniRef50_Q5NMD5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 195 1e-48 UniRef50_Q056S8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 195 1e-48 UniRef50_P59520 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 195 1e-48 UniRef50_Q7VQW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 195 2e-48 UniRef50_C4R8P0 Imidazole glycerol phosphate synthase (Glutamine... 193 4e-48 UniRef50_D1Y7T0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 193 4e-48 UniRef50_A3HVE8 Phosphoribosylformimino-5-aminoimidazole carboxa... 193 4e-48 UniRef50_Q058A3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 193 7e-48 UniRef50_Q12NS9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 192 1e-47 UniRef50_Q1GHT0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 192 1e-47 UniRef50_A8ZUC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 192 1e-47 UniRef50_A7FU80 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 190 3e-47 UniRef50_B6YWA8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 190 4e-47 UniRef50_B1ZW12 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 190 4e-47 UniRef50_C8WUX9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 189 6e-47 UniRef50_Q67KH9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 189 7e-47 UniRef50_Q7MPP3 Putative imidazole glycerol phosphate synthase s... 189 8e-47 UniRef50_C6N0X3 Phosphoribosylformimino-5-aminoimidazole carboxa... 189 8e-47 UniRef50_A7SPR8 Predicted protein n=1 Tax=Nematostella vectensis... 189 1e-46 UniRef50_C6UMW5 Putative phosphoribosylformimino-5-aminoimidazol... 188 1e-46 UniRef50_D1RFK6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 188 1e-46 UniRef50_C6Y3G6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 187 4e-46 UniRef50_A7H8C3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 186 4e-46 UniRef50_O29276 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 185 1e-45 UniRef50_D2L5A7 Histidine biosynthesis protein n=1 Tax=Desulfovi... 185 1e-45 UniRef50_B4U8M5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 185 2e-45 UniRef50_B9K9S2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 184 2e-45 UniRef50_C4L175 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 184 3e-45 UniRef50_A1WSE3 Histidine biosynthesis n=1 Tax=Verminephrobacter... 183 4e-45 UniRef50_Q0AP83 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 183 6e-45 UniRef50_C9YDK8 Imidazole glycerol phosphate synthase subunit hi... 182 8e-45 UniRef50_A1ZVN4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 182 9e-45 UniRef50_B9WJS1 Imidazole glycerol phosphate synthase [includes:... 182 1e-44 UniRef50_A3UE29 HisF (Cyclase) n=1 Tax=Oceanicaulis alexandrii H... 181 2e-44 UniRef50_C6XVQ0 Histidine biosynthesis protein n=1 Tax=Pedobacte... 181 2e-44 UniRef50_C1FJN8 Predicted protein n=13 Tax=cellular organisms Re... 181 2e-44 UniRef50_D1B860 Histidine biosynthesis protein n=1 Tax=Thermanae... 181 3e-44 UniRef50_A4EBZ6 Putative uncharacterized protein n=2 Tax=Collins... 180 3e-44 UniRef50_Q6SHC0 Imidazoleglycerol phosphate synthase, cyclase su... 180 4e-44 UniRef50_Q1AX07 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 179 8e-44 UniRef50_A0LAC8 Imidazole glycerol phosphate synthase subunit hi... 176 4e-43 UniRef50_B5YE89 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 176 5e-43 UniRef50_A8A8V9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 176 6e-43 UniRef50_Q5KNA0 Imidazoleglycerol phosphate synthase, putative n... 174 3e-42 UniRef50_C2FZQ4 Possible isomerase n=2 Tax=Sphingobacterium spir... 173 4e-42 UniRef50_A6Y2G9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 173 6e-42 UniRef50_B8LDL7 N-acetyl-glutamate-gamma-semialdehyde dehydrogen... 171 1e-41 UniRef50_B6BR00 Imidazole glycerol phosphate synthase subunit Hi... 171 2e-41 UniRef50_Q1N2Y7 HisF protein n=1 Tax=Bermanella marisrubri RepID... 171 2e-41 UniRef50_Q2N6D2 Imidazoleglycerol-phosphate synthase, cyclase su... 170 3e-41 UniRef50_A5INE5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 170 6e-41 UniRef50_Q062W6 Putative cyclase hisF n=1 Tax=Synechococcus sp. ... 169 8e-41 UniRef50_D2NNQ2 Phosphoribosylformimino-5-aminoimidazole carboxa... 168 1e-40 UniRef50_Q8TYD6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 168 1e-40 UniRef50_A2BSD9 Putative uncharacterized protein n=1 Tax=Prochlo... 166 8e-40 UniRef50_C2G0W0 Possible imidazoleglycerol-phosphate synthase Hi... 165 1e-39 UniRef50_B9U3E3 HisA n=1 Tax=Taylorella equigenitalis RepID=B9U3... 164 3e-39 UniRef50_Q01ZU7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 163 4e-39 UniRef50_Q7U923 Putative imidazole glycerol phosphate synthase s... 161 2e-38 UniRef50_Q2YZ70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 160 6e-38 UniRef50_C0WXE8 Imidazole glycerol phosphate synthase n=2 Tax=La... 159 7e-38 UniRef50_UPI000038E352 1-(5-phosphoribosyl)-5-[(5-phosphoribosyl... 155 1e-36 UniRef50_A8PRW0 Putative uncharacterized protein n=1 Tax=Malasse... 155 2e-36 UniRef50_A4YI32 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 153 6e-36 UniRef50_Q1D4M2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 152 9e-36 UniRef50_Q7WYR2 Imidazole glycerol phosphate synthase, subunit H... 152 1e-35 UniRef50_Q6KZD4 Phosphoribosylformimino-5-aminoimidazole carboxa... 150 5e-35 UniRef50_O33772 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 148 2e-34 UniRef50_C7NHA2 Phosphoribosylformimino-5-aminoimidazole carboxa... 147 4e-34 UniRef50_Q1PLA2 Putative cyclase hisF n=1 Tax=uncultured Prochlo... 146 5e-34 UniRef50_C7RAI7 Phosphoribosyl-ATP diphosphatase n=1 Tax=Kangiel... 146 9e-34 UniRef50_C7LZ82 Histidine biosynthesis protein n=1 Tax=Acidimicr... 145 1e-33 UniRef50_A2CB98 Putative uncharacterized protein n=1 Tax=Prochlo... 143 4e-33 UniRef50_Q3JEF8 Histidine biosynthesis n=2 Tax=Nitrosococcus oce... 142 1e-32 UniRef50_Q8ZY14 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 141 2e-32 UniRef50_Q4JIN2 Orf17 n=1 Tax=uncultured bacterium BAC10-10 RepI... 140 5e-32 UniRef50_Q58114 Uncharacterized protein MJ0703 n=8 Tax=Methanoco... 139 7e-32 UniRef50_Q4J8J0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 138 2e-31 UniRef50_D1SND3 HisA/hisF family protein n=1 Tax=Methanocaldococ... 137 3e-31 UniRef50_Q1IKB1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 137 3e-31 UniRef50_UPI0001C41F9C hisA/hisF family protein HisAF n=1 Tax=Me... 137 4e-31 UniRef50_A8M908 Histidine biosynthesis protein n=1 Tax=Caldivirg... 134 3e-30 UniRef50_A5UNR3 ProFAR isomerase-related protein n=3 Tax=Methano... 134 3e-30 UniRef50_A6C0W3 HisA/HisF family protein, putative n=1 Tax=Planc... 133 4e-30 UniRef50_B8HVG9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 133 5e-30 UniRef50_C9RDL3 HisA/hisF family protein n=3 Tax=Methanococcales... 131 2e-29 UniRef50_UPI00016C36C9 phosphoribosylformimino-5-aminoimidazole ... 127 3e-28 UniRef50_Q1NTJ9 Histidine biosynthesis n=1 Tax=delta proteobacte... 126 9e-28 UniRef50_A8V5Z6 Phosphoribosylformimino-5-aminoimidazole carboxa... 125 1e-27 UniRef50_O26765 Phosphoribosylformimino-5-aminoimidazole carboxa... 125 1e-27 UniRef50_A3PE78 Putative uncharacterized protein n=1 Tax=Prochlo... 121 2e-26 UniRef50_Q2NEW9 Putative uncharacterized protein n=1 Tax=Methano... 121 3e-26 UniRef50_C6QGP7 Histidine biosynthesis protein n=3 Tax=Rhizobial... 120 5e-26 UniRef50_Q603E0 Putative HisA/HisF family protein n=1 Tax=Methyl... 119 8e-26 UniRef50_Q2FS89 Histidine biosynthesis n=1 Tax=Methanospirillum ... 119 8e-26 UniRef50_D1JF95 Putative phosphoribosylformimino-5-aminoimidazol... 119 1e-25 UniRef50_A8TG14 Histidine biosynthesis protein n=1 Tax=Methanoco... 117 4e-25 UniRef50_B8EIK2 Histidine biosynthesis protein n=2 Tax=Beijerinc... 116 9e-25 UniRef50_Q1H0R8 Histidine biosynthesis n=1 Tax=Methylobacillus f... 115 2e-24 UniRef50_A8TGW8 Histidine biosynthesis protein n=1 Tax=Methanoco... 114 2e-24 UniRef50_C0N3H2 Histidine biosynthesis protein n=1 Tax=Methyloph... 114 2e-24 UniRef50_C4ZG69 APG10 (Albino and pale green 10); 1-(5-phosphori... 113 8e-24 UniRef50_UPI00006DC778 hypothetical protein CdifQ_04001754 n=1 T... 113 8e-24 UniRef50_B2JX56 Histidine biosynthesis protein n=6 Tax=Burkholde... 112 1e-23 UniRef50_D2QYD3 Histidine biosynthesis protein n=1 Tax=Pirellula... 111 2e-23 UniRef50_C6XDW4 Histidine biosynthesis protein n=1 Tax=Methylovo... 111 3e-23 UniRef50_Q10184 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 110 4e-23 UniRef50_C8S7V0 HisA/hisF family protein n=1 Tax=Ferroglobus pla... 110 4e-23 UniRef50_B2UL06 Phosphoribosylformimino-5-aminoimidazole carboxa... 110 5e-23 UniRef50_A7IL67 Histidine biosynthesis protein n=2 Tax=Alphaprot... 110 5e-23 UniRef50_A0B616 Histidine biosynthesis n=1 Tax=Methanosaeta ther... 110 6e-23 UniRef50_A2ST44 Histidine biosynthesis protein n=1 Tax=Methanoco... 109 7e-23 UniRef50_B7GE60 Predicted protein n=11 Tax=cellular organisms Re... 109 8e-23 UniRef50_O82782 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 109 1e-22 UniRef50_Q6R3H4 Conserved protein n=1 Tax=Methylosinus sp. LW2 R... 107 4e-22 UniRef50_O29545 Phosphoribosylformimino-5-aminoimidazole carboxa... 106 6e-22 UniRef50_A2SJ37 HisA/HisF family protein, putative n=3 Tax=Burkh... 103 5e-21 UniRef50_A3ZZD2 Phosphoribosylformimino-5-aminoimidazole carboxa... 103 5e-21 UniRef50_C6WWE3 Histidine biosynthesis protein n=1 Tax=Methylote... 103 5e-21 UniRef50_Q0G4J3 HisA/HisF family protein, putative n=1 Tax=Fulvi... 101 2e-20 UniRef50_Q7UQJ1 Putative uncharacterized protein n=1 Tax=Rhodopi... 101 2e-20 UniRef50_Q6R3G3 Conserved protein n=1 Tax=Methylomonas sp. LW13 ... 101 3e-20 UniRef50_C1ZC07 HisA/hisF family protein n=1 Tax=Planctomyces li... 100 6e-20 UniRef50_P40545 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 100 9e-20 UniRef50_Q46DH4 Phosphoribosylformimino-5-aminoimidazole carboxa... 95 2e-18 UniRef50_B1LZS6 Histidine biosynthesis protein n=10 Tax=Alphapro... 93 1e-17 UniRef50_D2MLS1 TIM-barrel protein, nifR3 family n=1 Tax=Bulleid... 89 1e-16 UniRef50_C4Z9Z2 Imidazole glycerol phosphate synthase subunit Hi... 89 1e-16 UniRef50_A9NE09 tRNA-dihydrouridine synthase n=2 Tax=Mollicutes ... 89 1e-16 UniRef50_Q3AZ67 Dihydrouridine synthase TIM-barrel protein nifR3... 86 9e-16 UniRef50_D2MIW0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 86 1e-15 UniRef50_C2D6C5 Possible tRNA-dihydrouridine synthase n=1 Tax=At... 85 2e-15 UniRef50_D0U4P6 tRNA-dihydrouridine synthase n=2 Tax=uncultured ... 85 3e-15 UniRef50_C7RGQ7 TIM-barrel protein, nifR3 family n=4 Tax=Anaeroc... 84 4e-15 UniRef50_Q2RZL4 NifR3 family enzyme n=2 Tax=Rhodothermaceae RepI... 84 5e-15 UniRef50_B6W908 Putative uncharacterized protein n=1 Tax=Anaeroc... 84 5e-15 UniRef50_B6FRG7 Putative uncharacterized protein (Fragment) n=2 ... 83 8e-15 UniRef50_C9KMX2 tRNA-dihydrouridine synthase n=3 Tax=Veillonella... 83 8e-15 UniRef50_A0Q6L0 TRNA-dihydrouridine synthase n=19 Tax=Francisell... 82 2e-14 UniRef50_C1ZGV0 tRNA-dihydrouridine synthase n=1 Tax=Planctomyce... 82 2e-14 UniRef50_A9KHE5 TIM-barrel protein, nifR3 family n=2 Tax=Clostri... 82 2e-14 UniRef50_C1FNC8 Dihydrouridine synthase n=35 Tax=cellular organi... 81 2e-14 UniRef50_C8W6Y9 TIM-barrel protein, nifR3 family n=1 Tax=Atopobi... 81 2e-14 UniRef50_C6JNK3 Dihydrouridine-tRNA ligase n=4 Tax=Fusobacterium... 81 3e-14 UniRef50_B7GFK6 tRNA-dihydrouridine synthase n=211 Tax=Bacteria ... 81 4e-14 UniRef50_Q6SFW7 NifR3/Smm1 family protein n=1 Tax=uncultured mar... 81 5e-14 UniRef50_P37567 Probable tRNA-dihydrouridine synthase 1 n=19 Tax... 80 5e-14 UniRef50_Q55724 Probable tRNA-dihydrouridine synthase 1 n=34 Tax... 80 6e-14 UniRef50_D2RLJ7 TIM-barrel protein, nifR3 family n=1 Tax=Acidami... 80 7e-14 UniRef50_D2RIC4 Geranylgeranylglyceryl phosphate synthase n=2 Ta... 80 9e-14 UniRef50_B3QWF2 TIM-barrel protein, nifR3 family n=26 Tax=Bacter... 80 1e-13 UniRef50_C6PST5 Dihydrouridine synthase DuS n=1 Tax=Clostridium ... 80 1e-13 UniRef50_A2DHB4 Putative uncharacterized protein n=1 Tax=Trichom... 79 1e-13 UniRef50_A7I924 Histidine biosynthesis n=3 Tax=Methanomicrobiale... 79 1e-13 UniRef50_A6NW05 Putative uncharacterized protein n=1 Tax=Bactero... 79 2e-13 UniRef50_D0NNQ3 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 78 2e-13 UniRef50_A9A4W7 Putative TIM-barrel protein, nifR3 family n=1 Ta... 78 2e-13 UniRef50_C1ZDL9 Putative TIM-barrel protein, nifR3 family n=1 Ta... 78 3e-13 UniRef50_C7H613 tRNA-dihydrouridine synthase n=3 Tax=Ruminococca... 78 3e-13 UniRef50_C8W3U6 TIM-barrel protein, nifR3 family n=8 Tax=Clostri... 78 4e-13 UniRef50_Q0W6C2 Phosphoribosylformimino-5-aminoimidazole carboxa... 78 4e-13 UniRef50_Q5CSA9 Dus1p, tRNA dihydrouridine synthase (Fragment) n... 78 4e-13 UniRef50_Q1RH84 Probable tRNA-dihydrouridine synthase n=59 Tax=A... 78 4e-13 UniRef50_D1BLD4 TIM-barrel protein, nifR3 family n=12 Tax=cellul... 77 5e-13 UniRef50_A8F3E7 N-acylglucosamine-6-phosphate 2-epimerase n=1 Ta... 77 5e-13 UniRef50_A2EN54 Putative uncharacterized protein n=1 Tax=Trichom... 77 6e-13 UniRef50_B8FGI4 TIM-barrel protein, nifR3 family n=1 Tax=Desulfa... 77 7e-13 UniRef50_Q2RTR9 Dihydrouridine synthase TIM-barrel protein nifR3... 76 8e-13 UniRef50_A2FU21 Putative uncharacterized protein n=1 Tax=Trichom... 76 1e-12 UniRef50_A9GW95 Dihydrouridine synthase TIM-barrel protein nifR3... 76 1e-12 UniRef50_Q31II6 Dihydrouridine synthase n=1 Tax=Thiomicrospira c... 76 1e-12 UniRef50_C9XSF8 tRNA-dihydrouridine synthase n=24 Tax=Clostridia... 76 1e-12 UniRef50_B2A3T5 TIM-barrel protein, nifR3 family n=1 Tax=Natrana... 76 1e-12 UniRef50_C4Z9L8 tRNA-dihydrouridine synthase n=26 Tax=Firmicutes... 76 2e-12 UniRef50_C1F4Z7 Putative tRNA-dihydrouridine synthase n=1 Tax=Ac... 76 2e-12 UniRef50_Q1IVR5 Dihydrouridine synthase TIM-barrel protein nifR3... 75 2e-12 UniRef50_C9SVG4 5-proFAR isomerase n=1 Tax=Verticillium albo-atr... 75 2e-12 UniRef50_Q5FMA1 Transcriptional regulator n=14 Tax=Firmicutes Re... 75 2e-12 UniRef50_Q0BSS6 tRNA-dihydrouridine synthase n=15 Tax=Alphaprote... 75 2e-12 UniRef50_C0WDP2 Putative uncharacterized protein n=1 Tax=Acidami... 75 2e-12 UniRef50_C1A3V7 Putative tRNA-dihydrouridine synthase n=1 Tax=Ge... 75 2e-12 UniRef50_C8WHM7 TIM-barrel protein, nifR3 family n=2 Tax=Corioba... 75 2e-12 UniRef50_Q1Q3Q8 Strongly similar to tRNA-dihydrouridine synthase... 75 3e-12 UniRef50_UPI0001BC5FF0 nitrogen regulation protein NIFR3 n=1 Tax... 75 3e-12 UniRef50_A6DPY9 Putative uncharacterized protein n=1 Tax=Lentisp... 74 4e-12 UniRef50_B9NQS6 NifR3 family protein n=3 Tax=Rhodobacteraceae Re... 74 5e-12 UniRef50_B7EB81 cDNA clone:J013037E09, full insert sequence n=3 ... 73 7e-12 UniRef50_B5FFW2 Putative imidazole glycerol phosphate synthase s... 73 9e-12 UniRef50_B9SRY4 Putative uncharacterized protein n=1 Tax=Ricinus... 73 1e-11 UniRef50_B9JF02 tRNA-dihydrouridine synthase protein n=12 Tax=Al... 73 1e-11 UniRef50_Q9F8I8 Cyclase (Fragment) n=1 Tax=Carboxydothermus hydr... 73 1e-11 UniRef50_Q6F288 TRNA dihydrouridine synthetase n=3 Tax=Mollicute... 73 1e-11 UniRef50_B9MMW4 TIM-barrel protein, nifR3 family n=3 Tax=Clostri... 72 2e-11 UniRef50_Q8PX79 NifR3-like protein n=3 Tax=Methanosarcina RepID=... 72 2e-11 UniRef50_Q3A324 Dihydrouridine synthase n=10 Tax=Desulfuromonada... 72 2e-11 UniRef50_A9UTQ9 Predicted protein n=1 Tax=Monosiga brevicollis R... 72 2e-11 UniRef50_A2EF32 Dihydrouridine synthase, putative n=1 Tax=Tricho... 72 2e-11 UniRef50_B0UHM8 TIM-barrel protein, nifR3 family n=6 Tax=Rhizobi... 71 3e-11 UniRef50_B0TBQ2 Dihydrouridine synthase tim-barrel nifr3 family ... 71 3e-11 UniRef50_C3MBL4 tRNA-dihydrouridine synthase n=1 Tax=Rhizobium s... 71 3e-11 UniRef50_C1ZB06 tRNA-dihydrouridine synthase n=1 Tax=Planctomyce... 71 4e-11 UniRef50_Q5M689 Possible transcriptional regulator n=25 Tax=Stre... 71 4e-11 UniRef50_A8Y3E7 Putative uncharacterized protein n=2 Tax=Caenorh... 71 4e-11 UniRef50_C9RMP3 Dihydrouridine synthase DuS n=1 Tax=Fibrobacter ... 71 5e-11 UniRef50_B8FH09 Dihydrouridine synthase DuS n=1 Tax=Desulfatibac... 71 5e-11 UniRef50_O95620 tRNA-dihydrouridine synthase 4-like n=40 Tax=Met... 71 5e-11 UniRef50_A0LJ96 Putative TIM-barrel protein, nifR3 family n=1 Ta... 70 5e-11 UniRef50_Q9KV66 tRNA-dihydrouridine synthase B n=56 Tax=Proteoba... 70 6e-11 UniRef50_A7AQM0 Dihydrouridine synthase, putative n=1 Tax=Babesi... 70 6e-11 UniRef50_P41504 Probable tRNA-dihydrouridine synthase n=93 Tax=A... 70 6e-11 UniRef50_A4EC62 Putative uncharacterized protein n=3 Tax=Collins... 70 7e-11 UniRef50_Q6MNE9 Nitrogen regulation protein nifR3 n=1 Tax=Bdello... 70 8e-11 UniRef50_D1YXT1 Putative uncharacterized protein n=1 Tax=Methano... 69 9e-11 UniRef50_B8GW86 tRNA-dihydrouridine synthase n=7 Tax=Alphaproteo... 69 1e-10 UniRef50_Q88DK5 tRNA-dihydrouridine synthase B n=460 Tax=Proteob... 69 1e-10 UniRef50_C0GJW0 TIM-barrel protein, nifR3 family n=1 Tax=Dethiob... 69 1e-10 UniRef50_B1ZWU6 TIM-barrel protein, nifR3 family n=6 Tax=Verruco... 69 1e-10 UniRef50_B9JW92 Nitrogen regulation protein n=4 Tax=Rhizobiales ... 69 1e-10 UniRef50_A8ZYE4 Putative TIM-barrel protein, nifR3 family n=1 Ta... 69 1e-10 UniRef50_Q14SX5 Putative dihydrouridine synthase n=6 Tax=Clostri... 69 1e-10 UniRef50_Q4UGK9 Putative uncharacterized protein n=2 Tax=Theiler... 69 2e-10 UniRef50_C5WE57 tRNA-dihydrouridine synthase n=42 Tax=Streptococ... 68 2e-10 UniRef50_Q2LR94 TRNA-dihydrouridine synthase n=2 Tax=Deltaproteo... 68 2e-10 UniRef50_UPI0000D52F94 Dihydrouridine synthase TIM-barrel protei... 68 2e-10 UniRef50_C2KYD0 Dihydrouridine synthase n=4 Tax=Bacteria RepID=C... 68 2e-10 UniRef50_C0QKE4 Dhs2 n=1 Tax=Desulfobacterium autotrophicum HRM2... 68 2e-10 UniRef50_Q72EB7 Dihydrouridine synthase family protein n=4 Tax=D... 68 2e-10 UniRef50_B0VH62 Dihydrouridine synthase family protein n=1 Tax=C... 68 2e-10 UniRef50_A9BIR6 Dihydrouridine synthase DuS n=1 Tax=Petrotoga mo... 68 3e-10 UniRef50_A4HAN2 Putative uncharacterized protein n=3 Tax=Leishma... 68 3e-10 UniRef50_Q6C4K2 YALI0E26059p n=1 Tax=Yarrowia lipolytica RepID=Q... 68 3e-10 UniRef50_B2ULM0 TIM-barrel protein, nifR3 family n=3 Tax=Verruco... 68 3e-10 UniRef50_Q30WR3 Dihydrouridine synthase family protein n=3 Tax=D... 68 4e-10 UniRef50_D0LJX3 TIM-barrel protein, nifR3 family n=1 Tax=Haliang... 68 4e-10 UniRef50_Q54XQ6 tRNA-dihydrouridine synthase 1-like protein n=1 ... 67 6e-10 UniRef50_C7PIH0 TIM-barrel protein, nifR3 family n=7 Tax=Bactero... 67 6e-10 UniRef50_Q9FH91 Gb|AAF51525.1 n=7 Tax=Viridiplantae RepID=Q9FH91... 67 7e-10 UniRef50_A3VWV8 TRNA-dihydrouridine synthase, putative n=4 Tax=R... 67 7e-10 UniRef50_B6YQB2 tRNA-dihydrouridine synthase n=36 Tax=Bacteria R... 67 7e-10 UniRef50_Q09504 Uncharacterized tRNA-dihydrouridine synthase-lik... 67 8e-10 UniRef50_B8DIS9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibri... 66 8e-10 UniRef50_A6BZR9 Predicted TIM-barrel enzyme, possibly dehydrogen... 66 9e-10 UniRef50_D1U4K9 Dihydrouridine synthase DuS n=1 Tax=Desulfovibri... 66 9e-10 UniRef50_B8GCQ5 TIM-barrel protein, nifR3 family n=6 Tax=Chlorof... 66 1e-09 UniRef50_D1R8P9 Putative uncharacterized protein n=1 Tax=Parachl... 66 1e-09 UniRef50_Q2RM54 Dihydrouridine synthase TIM-barrel protein nifR3... 66 1e-09 UniRef50_D0L1E3 TIM-barrel protein, nifR3 family n=1 Tax=Halothi... 66 1e-09 UniRef50_A6CBK4 Predicted TIM-barrel enzyme, possibly dehydrogen... 66 1e-09 UniRef50_Q12ZA4 Putative uncharacterized protein n=5 Tax=Euryarc... 65 2e-09 UniRef50_D2U2K4 tRNA-dihydrouridine synthase B n=1 Tax=Arsenopho... 65 2e-09 UniRef50_A6DCX2 tRNA-dihydrouridine synthase B n=1 Tax=Caminibac... 65 2e-09 UniRef50_Q6AKJ6 Putative uncharacterized protein n=1 Tax=Desulfo... 65 2e-09 UniRef50_Q12U52 tRNA-dihydrouridine synthase n=2 Tax=Archaea Rep... 65 2e-09 UniRef50_B7PPV8 tRNA-dihydrouridine synthase, putative n=1 Tax=I... 65 2e-09 UniRef50_Q54ES7 tRNA-dihydrouridine synthase 4-like protein n=1 ... 65 3e-09 UniRef50_C6C170 Dihydrouridine synthase DuS n=1 Tax=Desulfovibri... 65 3e-09 UniRef50_B8P3J2 Predicted protein (Fragment) n=3 Tax=Agaricomyce... 65 3e-09 UniRef50_C1E909 tRNA-dihydrouridine synthase (Fragment) n=2 Tax=... 64 3e-09 UniRef50_A5FL15 tRNA-dihydrouridine synthase B-like protein n=14... 64 3e-09 UniRef50_D1AII6 Dihydrouridine synthase DuS n=1 Tax=Sebaldella t... 64 4e-09 UniRef50_C7GZ00 tRNA-dihydrouridine synthase n=1 Tax=Eubacterium... 64 4e-09 UniRef50_A5EVV4 Dihydrouridine synthase n=2 Tax=Cardiobacteriace... 64 4e-09 UniRef50_B7PD41 tRNA-dihydrouridine synthase, putative n=1 Tax=I... 64 4e-09 UniRef50_B0S217 Nitrogen regulation protein n=3 Tax=Clostridiale... 64 4e-09 UniRef50_Q2C3Y8 Putative oxidoreductase protein n=3 Tax=Gammapro... 64 4e-09 UniRef50_D1AWB1 Dihydrouridine synthase DuS n=12 Tax=Fusobacteri... 64 4e-09 UniRef50_UPI00016C52C4 dihydrouridine synthase DuS n=1 Tax=Gemma... 64 5e-09 UniRef50_D0WEP2 tRNA-dihydrouridine synthase B n=2 Tax=Slackia R... 64 5e-09 UniRef50_UPI000194DF67 PREDICTED: dihydrouridine synthase 3-like... 64 5e-09 UniRef50_Q06063 tRNA-dihydrouridine synthase 4 n=23 Tax=Saccharo... 64 6e-09 UniRef50_D2NNX0 tRNA-dihydrouridine synthase n=3 Tax=Actinobacte... 63 7e-09 UniRef50_A0M6M9 TRNA-dihydrouridine synthase n=16 Tax=Bacteroide... 63 7e-09 UniRef50_A0EG06 Chromosome undetermined scaffold_94, whole genom... 63 8e-09 UniRef50_Q00XL7 TRNA-dihydrouridine synthase (ISS) n=1 Tax=Ostre... 63 9e-09 UniRef50_A8J121 Predicted protein n=1 Tax=Chlamydomonas reinhard... 63 9e-09 UniRef50_B9PUI2 Dihydrouridine synthase domain-containing protei... 63 9e-09 UniRef50_Q1ZGI3 NifR3/Smm1 family protein n=1 Tax=Psychromonas s... 63 9e-09 UniRef50_A9V4A0 Predicted protein n=1 Tax=Monosiga brevicollis R... 63 1e-08 UniRef50_Q1NXZ7 Dihydrouridine synthase TIM-barrel protein nifR3... 63 1e-08 UniRef50_Q0F181 Dihydrouridine synthase TIM-barrel protein nifR3... 63 1e-08 UniRef50_C2KNM7 Possible tRNA-dihydrouridine synthase n=4 Tax=Mo... 63 1e-08 UniRef50_Q7QCT0 AGAP002791-PA (Fragment) n=3 Tax=Culicidae RepID... 63 1e-08 UniRef50_B5IUS4 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 63 1e-08 UniRef50_C1SJZ7 tRNA-dihydrouridine synthase n=1 Tax=Denitrovibr... 63 1e-08 UniRef50_P44965 tRNA-dihydrouridine synthase B n=20 Tax=Pasteure... 63 1e-08 UniRef50_Q256J2 Dehydrogenases n=13 Tax=Chlamydiaceae RepID=Q256... 62 2e-08 UniRef50_A0Z0J5 TRNA-dihydrouridine synthase B n=2 Tax=unclassif... 62 2e-08 UniRef50_C5CHS6 Dihydroorotate dehydrogenase family protein n=1 ... 62 2e-08 UniRef50_O67533 Probable tRNA-dihydrouridine synthase n=1 Tax=Aq... 62 2e-08 UniRef50_A7BE39 Putative uncharacterized protein n=1 Tax=Actinom... 62 2e-08 UniRef50_B9CKJ9 tRNA-dihydrouridine synthase B n=1 Tax=Atopobium... 62 2e-08 UniRef50_A3XQ63 PcrB-like protein n=3 Tax=Flavobacteriaceae RepI... 62 2e-08 UniRef50_A4IM35 Dihydroorotate dehydrogenase n=348 Tax=Bacteria ... 62 2e-08 UniRef50_B9L781 tRNA-dihydrouridine synthase B n=1 Tax=Nautilia ... 62 2e-08 UniRef50_Q9BTJ3 DUS1L protein (Fragment) n=7 Tax=Euteleostomi Re... 62 2e-08 UniRef50_Q6P1R4 tRNA-dihydrouridine synthase 1-like n=12 Tax=Eut... 62 2e-08 UniRef50_D2R6Z1 TIM-barrel protein, nifR3 family n=3 Tax=Plancto... 61 3e-08 UniRef50_UPI00015B403F PREDICTED: similar to MGC79829 protein n=... 61 3e-08 UniRef50_Q7ZWS1 tRNA-dihydrouridine synthase 3-like n=3 Tax=Xeno... 61 3e-08 UniRef50_B1LWM8 TIM-barrel protein, nifR3 family n=1 Tax=Methylo... 61 3e-08 UniRef50_Q9RDC6 Putative uncharacterized protein SCO2497 n=4 Tax... 61 3e-08 UniRef50_UPI000179183B PREDICTED: similar to tRNA-dihydrouridine... 61 3e-08 UniRef50_C9KKE5 Dihydroorotate oxidase n=6 Tax=Bacteria RepID=C9... 61 3e-08 UniRef50_Q8SUV4 Putative uncharacterized protein ECU07_1610 n=1 ... 61 3e-08 UniRef50_C4QMR1 tRNA-dihydrouridine synthase, putative n=1 Tax=S... 61 4e-08 UniRef50_B9ZKT6 TIM-barrel protein, nifR3 family n=1 Tax=Thioalk... 61 4e-08 UniRef50_Q3MB47 Dihydrouridine synthase, DuS n=6 Tax=Bacteria Re... 61 4e-08 UniRef50_C9LMP9 tRNA-dihydrouridine synthase n=1 Tax=Dialister i... 61 4e-08 UniRef50_A3QE46 2-nitropropane dioxygenase, NPD n=20 Tax=Gammapr... 61 4e-08 UniRef50_Q9JUP6 tRNA-dihydrouridine synthase C n=23 Tax=Neisseri... 61 4e-08 UniRef50_UPI000186DA49 tRNA-dihydrouridine synthase, putative n=... 61 4e-08 UniRef50_C4VA23 Putative uncharacterized protein n=1 Tax=Nosema ... 61 5e-08 UniRef50_A8N483 Putative uncharacterized protein n=2 Tax=Agarica... 61 5e-08 UniRef50_Q5KP54 Putative uncharacterized protein n=1 Tax=Filobas... 61 5e-08 UniRef50_A7I0T0 NifR3 family protein n=9 Tax=Epsilonproteobacter... 61 5e-08 UniRef50_D1AZV6 Dihydrouridine synthase DuS n=7 Tax=Campylobacte... 61 5e-08 UniRef50_B9K738 TIM-barrel protein, nifR3 family n=1 Tax=Thermot... 61 5e-08 UniRef50_UPI0001C41F37 tRNA-dihydrouridine synthase DusA2 n=1 Ta... 60 6e-08 UniRef50_Q4PG83 Putative uncharacterized protein n=2 Tax=Ustilag... 60 6e-08 UniRef50_Q2IG49 Dihydrouridine synthase TIM-barrel protein nifR3... 60 6e-08 UniRef50_C6A2A3 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 60 6e-08 UniRef50_Q96G46 tRNA-dihydrouridine synthase 3-like n=17 Tax=Coe... 60 7e-08 UniRef50_B0SC53 tRNA-dihydrouridine synthase n=2 Tax=Leptospira ... 60 8e-08 UniRef50_C6MNJ9 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 60 8e-08 UniRef50_D0NZC8 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 60 8e-08 UniRef50_A4S141 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 60 9e-08 UniRef50_A7H1K2 tRNA-dihydrouridine synthase B n=14 Tax=Campylob... 60 9e-08 UniRef50_A1VHK2 Dihydrouridine synthase, DuS n=10 Tax=Desulfovib... 60 9e-08 UniRef50_UPI0001910D6A bifunctional phosphoribosyl-AMP cyclohydr... 60 9e-08 UniRef50_A1RXV6 Geranylgeranylglyceryl phosphate synthase n=4 Ta... 60 9e-08 UniRef50_P33371 tRNA-dihydrouridine synthase C n=160 Tax=Gammapr... 59 1e-07 UniRef50_Q6M9N8 Putative uncharacterized protein n=1 Tax=Candida... 59 1e-07 UniRef50_A1S1G3 Oxidoreductase, FAD/FMN-binding n=1 Tax=Shewanel... 59 1e-07 UniRef50_Q6MRF1 Transcription regulator homolog yacF n=1 Tax=Bde... 59 1e-07 UniRef50_B3LAS6 tRNA-dihydrouridine synthase, putative n=6 Tax=P... 59 1e-07 UniRef50_B1C9Q3 Putative uncharacterized protein n=1 Tax=Anaerof... 59 1e-07 UniRef50_Q9VY45 CG1434 n=20 Tax=Arthropoda RepID=Q9VY45_DROME 59 1e-07 UniRef50_D1VTQ2 Probable tRNA-dihydrouridine synthase n=1 Tax=Pe... 59 1e-07 UniRef50_C5TM05 tRNA-dihydrouridine synthase C n=5 Tax=Neisseria... 59 1e-07 UniRef50_C1MXD1 Dihydrouridine synthase n=1 Tax=Micromonas pusil... 59 1e-07 UniRef50_A9BJH4 Dihydroorotate dehydrogenase n=45 Tax=Bacteria R... 59 1e-07 UniRef50_UPI000180C543 PREDICTED: similar to dihydrouridine synt... 59 1e-07 UniRef50_A8QBG9 PP3111 protein, putative n=1 Tax=Brugia malayi R... 59 2e-07 UniRef50_B8C4H3 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 59 2e-07 UniRef50_A5KQG7 Putative uncharacterized protein n=1 Tax=Ruminoc... 59 2e-07 UniRef50_Q5ZRM0 Nitrogen regulation protein n=6 Tax=Legionella R... 59 2e-07 UniRef50_C6XJQ7 Dihydrouridine synthase DuS n=2 Tax=Hyphomonadac... 59 2e-07 UniRef50_C0W327 Dihydrouridine synthase n=2 Tax=Actinomyces RepI... 59 2e-07 UniRef50_D2VPF2 Predicted protein n=2 Tax=Naegleria gruberi RepI... 59 2e-07 UniRef50_C4KIS5 Geranylgeranylglyceryl phosphate synthase n=13 T... 58 2e-07 UniRef50_C5CI99 Dihydrouridine synthase DuS n=1 Tax=Kosmotoga ol... 58 2e-07 UniRef50_Q090Q9 TRNA-dihydrouridine synthase B n=2 Tax=Cystobact... 58 3e-07 UniRef50_A2GL21 Oxidoreductase, FAD/FMN-binding family protein n... 58 3e-07 UniRef50_Q9VPM1 CG3645, isoform A n=9 Tax=Diptera RepID=Q9VPM1_D... 58 3e-07 UniRef50_A7S213 Predicted protein n=1 Tax=Nematostella vectensis... 58 3e-07 UniRef50_UPI00006A5AE6 PREDICTED: similar to PP3111 protein n=1 ... 58 3e-07 UniRef50_Q4SBU2 Inosine-5'-monophosphate dehydrogenase (Fragment... 58 3e-07 UniRef50_C7LQM9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibri... 58 3e-07 UniRef50_Q47C15 Dihydrouridine synthase, DuS n=1 Tax=Dechloromon... 58 3e-07 UniRef50_Q4DCG2 Putative uncharacterized protein n=2 Tax=Trypano... 58 3e-07 UniRef50_A3HVC3 PcrB-like protein n=1 Tax=Algoriphagus sp. PR1 R... 58 4e-07 UniRef50_Q9XVN8 Protein F36A2.2, partially confirmed by transcri... 58 4e-07 UniRef50_B8HZU1 Photosystem I assembly BtpA n=5 Tax=Clostridiale... 58 4e-07 UniRef50_C5F231 Putative uncharacterized protein n=2 Tax=Helicob... 58 4e-07 UniRef50_A4A9J1 2-nitropropane dioxygenase, NPD n=1 Tax=Congregi... 58 4e-07 UniRef50_Q73RG6 Dihydrouridine synthase, putative n=1 Tax=Trepon... 57 5e-07 UniRef50_B7XJM7 tRNA-dihydrouridine synthase 1 n=1 Tax=Enterocyt... 57 5e-07 UniRef50_A6QPA8 DUS4L protein n=2 Tax=Eutheria RepID=A6QPA8_BOVIN 57 5e-07 UniRef50_UPI0001BCB21D enoyl-[acyl-carrier-protein] reductase n=... 57 6e-07 UniRef50_Q0VMM0 2-nitropropane dioxygenase, putative n=2 Tax=Gam... 57 6e-07 UniRef50_Q54CU9 tRNA-dihydrouridine synthase 3-like n=1 Tax=Dict... 57 6e-07 UniRef50_Q91XI1 tRNA-dihydrouridine synthase 3-like n=12 Tax=Cho... 57 6e-07 UniRef50_A5FJK8 Geranylgeranylglyceryl phosphate synthase n=7 Ta... 57 7e-07 UniRef50_B3PD21 Dihydrouridine synthase family protein n=4 Tax=P... 57 7e-07 UniRef50_C6SB16 tRNA-dihydrouridine synthase B n=1 Tax=Neisseria... 57 7e-07 UniRef50_C5LIP5 Ornithine decarboxylase n=4 Tax=Perkinsus marinu... 57 7e-07 UniRef50_Q1N033 Putative uncharacterized protein n=1 Tax=Bermane... 57 8e-07 UniRef50_Q9NX74 tRNA-dihydrouridine synthase 2-like n=35 Tax=Met... 57 8e-07 UniRef50_C1DY86 Dihydrouridine synthase-like family protein n=1 ... 57 8e-07 UniRef50_B6BT49 tRNA-dihydrouridine synthase A n=4 Tax=SAR11 clu... 56 8e-07 UniRef50_Q9VJ06 CG10495 n=12 Tax=Drosophila RepID=Q9VJ06_DROME 56 8e-07 UniRef50_Q6MM64 Inosine-5-monophosphate dehydrogenase n=1 Tax=Bd... 56 8e-07 UniRef50_B9YRZ8 Indole-3-glycerol-phosphate synthase n=3 Tax=Nos... 56 9e-07 UniRef50_Q884C6 tRNA-dihydrouridine synthase C n=13 Tax=Proteoba... 56 9e-07 UniRef50_C5CIM1 N-acylglucosamine-6-phosphate 2-epimerase n=1 Ta... 56 9e-07 UniRef50_A4S604 Predicted protein (Fragment) n=2 Tax=Mamiellales... 56 9e-07 UniRef50_B7FXL2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 56 1e-06 UniRef50_B8P5W1 Predicted protein n=1 Tax=Postia placenta Mad-69... 56 1e-06 UniRef50_D2RA64 TIM-barrel protein, nifR3 family n=5 Tax=Actinob... 56 1e-06 UniRef50_B8C9N7 Predicted protein n=1 Tax=Thalassiosira pseudona... 56 1e-06 UniRef50_D1N0Y1 Dihydrouridine synthase DuS n=1 Tax=Victivallis ... 56 1e-06 UniRef50_Q1J2A4 Dihydrouridine synthase, DuS n=3 Tax=Deinococcus... 56 1e-06 UniRef50_Q9V1G3 Indole-3-glycerol phosphate synthase n=11 Tax=Eu... 56 1e-06 UniRef50_Q6AJZ5 tRNA-dihydrouridine synthase n=1 Tax=Desulfotale... 56 1e-06 UniRef50_UPI0001C3129C dihydrouridine synthase DuS n=1 Tax=Conex... 56 2e-06 UniRef50_Q127F8 Dihydrouridine synthase, DuS n=7 Tax=Proteobacte... 56 2e-06 UniRef50_B2KES4 Dihydrouridine synthase DuS n=1 Tax=Elusimicrobi... 56 2e-06 UniRef50_C6W0Z1 Geranylgeranylglyceryl phosphate synthase n=2 Ta... 56 2e-06 UniRef50_D1AI07 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=... 55 2e-06 UniRef50_D2QXV2 Dihydrouridine synthase DuS n=4 Tax=Planctomycet... 55 2e-06 UniRef50_Q82KQ8 Putative oxidoreductase n=1 Tax=Streptomyces ave... 55 2e-06 UniRef50_A8J786 Imidazole glycerol phosphate synthase (Fragment)... 55 2e-06 UniRef50_A7EMF2 Putative uncharacterized protein n=2 Tax=Sclerot... 55 2e-06 UniRef50_C7NTV9 Dihydropyrimidine dehydrogenase n=10 Tax=Halobac... 55 2e-06 UniRef50_Q7X346 Putative uncharacterized protein n=1 Tax=uncultu... 55 2e-06 UniRef50_A4RU69 Predicted protein n=3 Tax=Chlorophyta RepID=A4RU... 55 3e-06 UniRef50_Q9ZLB6 Probable tRNA-dihydrouridine synthase n=23 Tax=E... 55 3e-06 UniRef50_B5YJH1 Dihydroorotate dehydrogenase n=24 Tax=Bacteria R... 54 4e-06 UniRef50_B3RKU4 Putative uncharacterized protein n=2 Tax=Metazoa... 54 4e-06 UniRef50_A5G9T5 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=... 54 4e-06 UniRef50_C1TL75 tRNA-dihydrouridine synthase n=2 Tax=Synergistac... 54 4e-06 UniRef50_UPI00017B0A55 UPI00017B0A55 related cluster n=1 Tax=Tet... 54 4e-06 UniRef50_A1X3A1 Putative NADH:flavin oxidoreductase n=2 Tax=Anae... 54 4e-06 UniRef50_Q1G992 Dihydroorotate dehydrogenase n=3 Tax=Lactobacill... 54 4e-06 UniRef50_C8X0F5 Dihydrouridine synthase DuS n=1 Tax=Desulfohalob... 54 4e-06 UniRef50_B0S913 tRNA-dihydrouridine synthase n=7 Tax=Leptospira ... 54 5e-06 UniRef50_C1E1T8 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 54 5e-06 UniRef50_C4Q4G5 tRNA-dihydrouridine synthase, putative n=1 Tax=S... 54 5e-06 UniRef50_A3JQL6 2-nitropropane dioxygenase, NPD n=3 Tax=Proteoba... 54 5e-06 UniRef50_C3WAT9 2-nitropropane dioxygenase n=5 Tax=Fusobacterium... 54 5e-06 UniRef50_C1EGQ3 Predicted protein n=2 Tax=Micromonas RepID=C1EGQ... 54 5e-06 UniRef50_C8W700 Dihydroorotate dehydrogenase family protein n=2 ... 54 5e-06 UniRef50_D2VPP8 Predicted protein n=1 Tax=Naegleria gruberi RepI... 54 6e-06 UniRef50_Q6A959 TIM-barrel enzyme, NifR3 family n=2 Tax=Propioni... 54 6e-06 UniRef50_A8S5R8 Putative uncharacterized protein n=1 Tax=Clostri... 54 6e-06 UniRef50_C7PEQ0 Geranylgeranylglyceryl phosphate synthase n=3 Ta... 54 6e-06 UniRef50_C9M6H2 Dihydroorotate oxidase n=2 Tax=Synergistaceae Re... 54 6e-06 UniRef50_Q8TXM0 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 54 6e-06 UniRef50_UPI000186DAF4 tRNA-dihydrouridine synthase, putative n=... 54 6e-06 UniRef50_A3JG66 Putative uncharacterized protein n=3 Tax=Gammapr... 54 6e-06 UniRef50_Q21L63 Dihydrouridine synthase, DuS n=1 Tax=Saccharopha... 53 7e-06 UniRef50_A1BHW3 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=... 53 7e-06 UniRef50_C8X244 Dihydrouridine synthase DuS n=1 Tax=Desulfohalob... 53 7e-06 UniRef50_A3U098 Putative uncharacterized protein n=1 Tax=Oceanic... 53 7e-06 UniRef50_Q87N01 tRNA-dihydrouridine synthase C n=54 Tax=Gammapro... 53 8e-06 UniRef50_B8BQ55 Predicted protein n=1 Tax=Thalassiosira pseudona... 53 9e-06 UniRef50_Q02X79 Dioxygenase n=3 Tax=Lactococcus lactis RepID=Q02... 53 1e-05 UniRef50_C0GCL4 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 53 1e-05 UniRef50_A8MRX7 Uncharacterized protein At3g63510.2 n=5 Tax=Arab... 53 1e-05 UniRef50_C9M7Q0 Dihydrouridine synthase family protein n=1 Tax=J... 53 1e-05 UniRef50_A4YHD8 Indole-3-glycerol phosphate synthase n=13 Tax=Su... 53 1e-05 UniRef50_Q583Y8 TRNA-dihydrouridine synthase 4, putative n=4 Tax... 53 1e-05 UniRef50_UPI0000E479FB PREDICTED: similar to MGC108441 protein n... 53 1e-05 UniRef50_B9Y4T3 Putative uncharacterized protein n=1 Tax=Holdema... 53 1e-05 UniRef50_A9BH24 Putative N-acetylmannosamine-6-phosphate epimera... 53 1e-05 UniRef50_B9M3C8 Dihydrouridine synthase DuS n=2 Tax=Desulfuromon... 53 1e-05 UniRef50_A1AT39 Dihydrouridine synthase, DuS n=7 Tax=Desulfuromo... 53 1e-05 UniRef50_A8NZY7 tRNA-dihydrouridine synthase 3 n=2 Tax=Agaricale... 53 1e-05 UniRef50_B0S343 NADH-dependent flavin oxidoreductase n=3 Tax=Clo... 53 1e-05 UniRef50_Q5KPM6 Putative uncharacterized protein n=2 Tax=Filobas... 53 1e-05 UniRef50_A8J281 Predicted protein (Fragment) n=3 Tax=cellular or... 53 1e-05 UniRef50_D0IYT5 NADH:flavin oxidoreductase/NADH oxidase n=41 Tax... 52 2e-05 UniRef50_UPI0001BCCF0E nifR3 family TIM-barrel protein n=1 Tax=A... 52 2e-05 UniRef50_B3E8L6 Dihydrouridine synthase, DuS n=1 Tax=Geobacter l... 52 2e-05 UniRef50_Q47B08 2-nitropropane dioxygenase, NPD n=2 Tax=Proteoba... 52 2e-05 UniRef50_Q01YA2 Dihydroorotate dehydrogenase n=5 Tax=Bacteria Re... 52 2e-05 UniRef50_Q26HI8 Putative PcrB family protein n=1 Tax=Flavobacter... 52 2e-05 UniRef50_A8VQT3 Transposase IS3/IS911 family protein n=1 Tax=Bac... 52 2e-05 UniRef50_B0ESC7 tRNA-dihydrouridine synthase, putative n=2 Tax=E... 52 2e-05 UniRef50_Q39G69 NADH-flavin oxidoreductase/NADH oxidase n=13 Tax... 52 2e-05 UniRef50_B6JXB4 tRNA-dihydrouridine synthase n=1 Tax=Schizosacch... 52 2e-05 UniRef50_Q6MQA5 2-nitropropane dioxygenase n=1 Tax=Bdellovibrio ... 52 2e-05 UniRef50_C0QXB6 Dihydrouridine synthase-like (DUS-like) FMN-bind... 52 2e-05 UniRef50_A6DU09 Dihydrouridine synthase family protein n=1 Tax=L... 52 2e-05 UniRef50_D0LY25 TIM-barrel protein, yjbN family n=3 Tax=Bacteria... 52 2e-05 UniRef50_B3QW78 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 52 2e-05 UniRef50_C9KQV9 NADH:flavin oxidoreductase n=1 Tax=Mitsuokella m... 52 2e-05 UniRef50_C4V1R4 N-acylglucosamine-6-phosphate 2-epimerase n=4 Ta... 52 2e-05 UniRef50_B4RXY6 Oxidoreductase, FMN-binding protein n=7 Tax=Bact... 52 2e-05 UniRef50_B8DSX5 Possible NifR3-like protein n=15 Tax=Bifidobacte... 52 3e-05 UniRef50_B9PN28 tRNA-dihydrouridine synthase, putative n=3 Tax=T... 52 3e-05 UniRef50_Q466J2 NADH-dependent flavine oxidoreductase n=1 Tax=Me... 51 3e-05 UniRef50_Q9CJW1 tRNA-dihydrouridine synthase C n=7 Tax=Gammaprot... 51 3e-05 UniRef50_C4QAZ6 tRNA-dihydrouridine synthase, putative n=1 Tax=S... 51 3e-05 UniRef50_A6GHV6 Dihydrouridine synthase family protein n=1 Tax=P... 51 3e-05 UniRef50_C7GEK5 NADH:flavin oxidoreductase, Old Yellow Enzyme fa... 51 3e-05 UniRef50_UPI000180C428 PREDICTED: similar to tRNA-dihydrouridine... 51 3e-05 UniRef50_A4RVX6 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 51 3e-05 UniRef50_UPI000058804E PREDICTED: similar to MGC53781 protein n=... 51 3e-05 UniRef50_D1SCC9 N-acylglucosamine-6-phosphate 2-epimerase n=4 Ta... 51 4e-05 UniRef50_B8D5Y6 Geranylgeranylglyceryl phosphate synthase-like p... 51 4e-05 UniRef50_Q8TVJ8 Indole-3-glycerol phosphate synthase n=1 Tax=Met... 51 4e-05 UniRef50_Q17M24 tRNA-dihydrouridine synthase n=2 Tax=Diptera Rep... 51 4e-05 UniRef50_Q582L4 TRNA-dihydrouridine synthase 3, putative n=5 Tax... 51 4e-05 UniRef50_B1ZZ77 Dihydrouridine synthase DuS n=2 Tax=Opitutaceae ... 51 4e-05 UniRef50_UPI0001792282 PREDICTED: similar to tRNA-dihydrouridine... 51 5e-05 UniRef50_C5FBD9 tRNA-dihydrouridine synthase 1 n=1 Tax=Microspor... 51 5e-05 UniRef50_D1AMN2 Dihydrouridine synthase DuS n=3 Tax=Bacteria Rep... 51 5e-05 UniRef50_D1NSS9 Putative tRNA-dihydrouridine synthase n=1 Tax=Bi... 51 5e-05 UniRef50_B9XLX7 Dihydrouridine synthase DuS n=3 Tax=Verrucomicro... 51 5e-05 UniRef50_C9KP46 Oxidoreductase, FAD/FMN-binding n=2 Tax=Clostrid... 51 5e-05 UniRef50_A5WG83 TIM-barrel protein, yjbN family n=2 Tax=Moraxell... 51 5e-05 UniRef50_A1WLV1 NADH:flavin oxidoreductase/NADH oxidase n=37 Tax... 51 5e-05 UniRef50_Q9VIS4 CG10463 n=12 Tax=Drosophila RepID=Q9VIS4_DROME 51 5e-05 UniRef50_UPI0001C41E29 NADH:flavin oxidoreductase/NADH oxidase f... 51 5e-05 UniRef50_A4ECL7 Putative uncharacterized protein n=1 Tax=Collins... 51 5e-05 UniRef50_Q468H4 NADH peroxidase n=5 Tax=cellular organisms RepID... 51 5e-05 UniRef50_C3RNU9 NADH:flavin oxidoreductase n=2 Tax=Bacteria RepI... 51 5e-05 UniRef50_Q1QEU5 2-nitropropane dioxygenase, NPD n=3 Tax=Psychrob... 51 6e-05 UniRef50_Q8EW89 Inosine-5'-monophosphate dehydrogenase n=1 Tax=M... 51 6e-05 UniRef50_A6RVN2 Putative uncharacterized protein n=2 Tax=Sclerot... 51 6e-05 UniRef50_A2DYY3 Putative uncharacterized protein n=1 Tax=Trichom... 50 6e-05 UniRef50_Q2SJJ8 TRNA-dihydrouridine synthase n=7 Tax=Gammaproteo... 50 6e-05 UniRef50_B1HS08 2-nitropropane dioxygenase n=2 Tax=Bacillaceae R... 50 6e-05 UniRef50_C8WHP0 Dihydroorotate dehydrogenase family protein n=3 ... 50 7e-05 UniRef50_O27281 Dihydroorotate dehydrogenase n=20 Tax=Euryarchae... 50 7e-05 UniRef50_B2A1T3 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 50 7e-05 UniRef50_C0D969 Putative uncharacterized protein n=1 Tax=Clostri... 50 7e-05 UniRef50_A4HJH5 Dihydrouridine synthase (Dus), putative n=3 Tax=... 50 7e-05 UniRef50_UPI0001789498 N-acylglucosamine-6-phosphate 2-epimerase... 50 8e-05 UniRef50_C5D3D6 Indole-3-glycerol phosphate synthase n=10 Tax=Ba... 50 8e-05 UniRef50_C4F860 Putative uncharacterized protein n=2 Tax=Collins... 50 8e-05 UniRef50_A4IQ84 Indole-3-glycerol phosphate synthase n=7 Tax=Bac... 50 8e-05 UniRef50_C5X8Y0 Putative uncharacterized protein Sb02g020430 n=1... 50 8e-05 UniRef50_Q7UJL3 Inosine-5'-monophosphate dehydrogenase n=2 Tax=B... 50 9e-05 UniRef50_C7JI48 Enoyl[acyl-carrier-protein (ACP)] reductase n=8 ... 50 9e-05 UniRef50_UPI000038257B COG1902: NADH:flavin oxidoreductases, Old... 50 9e-05 UniRef50_Q0B324 Dihydroorotate oxidase B, catalytic subunit n=8 ... 49 1e-04 UniRef50_B0SXE6 TIM-barrel protein, nifR3 family n=2 Tax=Cauloba... 49 1e-04 UniRef50_C9RM69 TIM-barrel protein, yjbN family n=1 Tax=Fibrobac... 49 1e-04 UniRef50_A7HK00 Dihydrouridine synthase DuS n=8 Tax=Thermotogace... 49 1e-04 UniRef50_C0NEG2 tRNA-dihydrouridine synthase n=5 Tax=Ajellomyces... 49 1e-04 UniRef50_B1JA40 2-nitropropane dioxygenase NPD n=11 Tax=Proteoba... 49 1e-04 UniRef50_A9IBQ0 Putative uncharacterized protein n=1 Tax=Bordete... 49 1e-04 UniRef50_B7G5S1 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 49 1e-04 UniRef50_B0EBU6 tRNA-dihydrouridine synthase, putative n=4 Tax=E... 49 1e-04 UniRef50_O74731 tRNA-dihydrouridine synthase 2 n=2 Tax=Schizosac... 49 1e-04 UniRef50_Q0STG2 Dihydrouridine synthase family protein n=27 Tax=... 49 1e-04 UniRef50_A5Z3X7 Putative uncharacterized protein n=2 Tax=Clostri... 49 1e-04 UniRef50_A4YQH6 NADPH dehydrogenase n=5 Tax=Bacteria RepID=A4YQH... 49 1e-04 UniRef50_Q6SH52 Oxidoreductase, FAD/FMN-binding n=2 Tax=Bacteria... 49 1e-04 UniRef50_B7GNV1 N-acylglucosamine-6-phosphate 2-epimerase n=10 T... 49 1e-04 UniRef50_B0TGQ8 Dihydroorotate dehydrogenase n=32 Tax=Bacteria R... 49 1e-04 UniRef50_C4FAV3 Putative uncharacterized protein n=1 Tax=Collins... 49 2e-04 UniRef50_O29991 NADH-dependent flavin oxidoreductase n=1 Tax=Arc... 49 2e-04 UniRef50_Q3AC05 Dihydroorotate dehydrogenase n=1 Tax=Carboxydoth... 49 2e-04 UniRef50_P49058 Inosine-5'-monophosphate dehydrogenase n=23 Tax=... 49 2e-04 UniRef50_Q7PVV7 AGAP009171-PA (Fragment) n=3 Tax=Endopterygota R... 49 2e-04 UniRef50_A2F0D1 Putative uncharacterized protein n=1 Tax=Trichom... 49 2e-04 UniRef50_O74553 tRNA-dihydrouridine synthase 4 n=1 Tax=Schizosac... 49 2e-04 UniRef50_C8NN95 Dioxygenase n=4 Tax=Corynebacterium RepID=C8NN95... 49 2e-04 UniRef50_C1EEA5 Dihydrouridine synthase n=1 Tax=Micromonas sp. R... 49 2e-04 UniRef50_A7GWT5 NADH oxidase n=7 Tax=delta/epsilon subdivisions ... 49 2e-04 UniRef50_C1I8I7 N-acetylmannosamine-6-phosphate 2-epimerase n=7 ... 49 2e-04 UniRef50_A6L5H1 Dihydroorotate dehydrogenase n=7 Tax=Bacteroidal... 49 2e-04 UniRef50_A5ULU9 tRNA-dihydrouridine synthase n=2 Tax=Methanobrev... 49 2e-04 UniRef50_Q2NEG1 PyrD n=1 Tax=Methanosphaera stadtmanae DSM 3091 ... 49 2e-04 UniRef50_B5X496 tRNA-dihydrouridine synthase 3-like n=3 Tax=Euka... 49 2e-04 UniRef50_B9ML92 Ketose-bisphosphate aldolase n=2 Tax=Clostridial... 49 2e-04 UniRef50_A4RZE7 Predicted protein n=4 Tax=cellular organisms Rep... 49 2e-04 UniRef50_C1TMB2 Dihydroorotate dehydrogenase family protein n=1 ... 49 2e-04 UniRef50_A3U0T3 Probable dihydroorotate dehydrogenase, catalytic... 49 2e-04 UniRef50_UPI00016A96D1 S-mandelate dehydrogenase (MdlB) n=1 Tax=... 49 2e-04 UniRef50_C8PLW3 Putative dihydrouridine synthase n=1 Tax=Trepone... 48 2e-04 UniRef50_Q5KC68 tRNA-dihydrouridine synthase 3 n=2 Tax=Filobasid... 48 2e-04 UniRef50_B1L6Q8 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 48 2e-04 UniRef50_P47996 Inosine-5'-monophosphate dehydrogenase n=4 Tax=V... 48 2e-04 UniRef50_Q09E70 Thiazole biosynthesis protein ThiG n=1 Tax=Stigm... 48 2e-04 UniRef50_B7G230 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 48 2e-04 UniRef50_B8HZW6 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=... 48 3e-04 UniRef50_D0P0N4 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 48 3e-04 UniRef50_A7NSB8 Dihydroorotate dehydrogenase n=2 Tax=Roseiflexus... 48 3e-04 UniRef50_Q8CN30 Thiazole synthase n=10 Tax=Staphylococcus RepID=... 48 3e-04 UniRef50_Q2SS69 Putative N-acetylmannosamine-6-phosphate 2-epime... 48 3e-04 UniRef50_C5WZ26 Inosine-5'-monophosphate dehydrogenase n=10 Tax=... 48 3e-04 UniRef50_B0MC46 Putative uncharacterized protein n=1 Tax=Anaeros... 48 3e-04 UniRef50_Q1MQG1 Dihydroorotate dehydrogenase n=2 Tax=Deltaproteo... 48 3e-04 UniRef50_B1I129 2-nitropropane dioxygenase, NPD n=12 Tax=Bacteri... 48 3e-04 UniRef50_A5WFG6 FMN-dependent alpha-hydroxy acid dehydrogenase n... 48 3e-04 UniRef50_B1GZV7 Putative tRNA-dihydrouridine synthase n=1 Tax=un... 48 3e-04 UniRef50_B9Y4V9 Putative uncharacterized protein n=2 Tax=Holdema... 48 3e-04 UniRef50_O27697 Tryptophan synthase alpha chain n=3 Tax=Methanob... 48 3e-04 UniRef50_A8MJK5 Dihydroorotate dehydrogenase family protein n=1 ... 48 3e-04 UniRef50_C2KW54 Dihydrouridine synthase, DuS n=1 Tax=Oribacteriu... 48 3e-04 UniRef50_Q47CU3 Putative uncharacterized protein n=1 Tax=Dechlor... 48 3e-04 UniRef50_A6W1E8 Dihydrouridine synthase DuS n=1 Tax=Marinomonas ... 48 3e-04 UniRef50_C4ZIN5 Putative uncharacterized protein n=1 Tax=Thauera... 48 3e-04 UniRef50_C8QWB5 Dihydrouridine synthase DuS n=1 Tax=Desulfurivib... 48 3e-04 UniRef50_A9LZ84 Inosine-5'-monophosphate dehydrogenase n=57 Tax=... 48 3e-04 UniRef50_B2A0N8 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 48 3e-04 UniRef50_D1CBJ1 Tryptophan synthase alpha chain n=1 Tax=Thermoba... 48 3e-04 UniRef50_C9ZWQ2 tRNA-dihydrouridine synthase 1, putative n=2 Tax... 48 3e-04 UniRef50_B8LBY8 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 48 4e-04 UniRef50_C8SAQ9 CO dehydrogenase/acetyl-CoA synthase, delta subu... 48 4e-04 UniRef50_Q7NTY1 GMP reductase n=1 Tax=Chromobacterium violaceum ... 48 4e-04 UniRef50_D2VK62 Dihydrouridine synthase, DuS n=1 Tax=Naegleria g... 48 4e-04 UniRef50_A5N0D9 Predicted enoate reductase n=2 Tax=Clostridium k... 48 4e-04 UniRef50_C3Q9B4 Dihydrouridine synthase n=18 Tax=Bacteroidales R... 48 4e-04 UniRef50_C8PVF7 2-nitropropane dioxygenase, NPD n=3 Tax=Proteoba... 48 4e-04 UniRef50_Q3ABS1 Indole-3-glycerol phosphate synthase n=1 Tax=Car... 48 4e-04 UniRef50_C1XIL7 NADH:flavin oxidoreductase n=1 Tax=Meiothermus r... 48 4e-04 UniRef50_B1MZ73 Dihydroorotate dehydrogenase B, catalytic subuni... 48 5e-04 UniRef50_A5D1S4 Indole-3-glycerol phosphate synthase n=1 Tax=Pel... 48 5e-04 UniRef50_Q03NV8 Inosine-5'-monophosphate dehydrogenase n=14 Tax=... 48 5e-04 UniRef50_C7PJL9 2-nitropropane dioxygenase NPD n=1 Tax=Chitinoph... 47 5e-04 UniRef50_Q0A6E8 Indole-3-glycerol phosphate synthase n=5 Tax=Pro... 47 5e-04 UniRef50_B3RND8 Putative uncharacterized protein n=1 Tax=Trichop... 47 5e-04 UniRef50_A1RZ33 Inosine-5'-monophosphate dehydrogenase n=1 Tax=T... 47 5e-04 UniRef50_Q97F34 Thiamine monophosphate synthase n=1 Tax=Clostrid... 47 5e-04 UniRef50_A2TQS9 2-nitropropane dioxygenase n=4 Tax=Flavobacteria... 47 6e-04 UniRef50_C2CLX0 Possible 2-nitropropane dioxygenase n=7 Tax=Cory... 47 6e-04 UniRef50_B0NDA0 Putative uncharacterized protein n=1 Tax=Clostri... 47 6e-04 UniRef50_O53835 Probable tRNA-dihydrouridine synthase n=107 Tax=... 47 6e-04 UniRef50_O50316 Inosine-5'-monophosphate dehydrogenase n=1298 Ta... 47 6e-04 UniRef50_B5QYH8 Putative uncharacterized protein n=27 Tax=Bacter... 47 6e-04 UniRef50_O19904 Uncharacterized protein ycf23 n=1 Tax=Cyanidium ... 47 6e-04 UniRef50_B0EC90 tRNA-dihydrouridine synthase, putative n=2 Tax=E... 47 6e-04 UniRef50_B8GFK2 Methanogenesis marker protein 9 n=5 Tax=Methanom... 47 7e-04 UniRef50_C6A1J9 Bifunctional D-arabino 3-hexulose-6-phosphate fo... 47 7e-04 UniRef50_D1JFH0 Dihydroorotate dehydrogenase electron transfer s... 47 7e-04 UniRef50_Q1CZH5 Indole-3-glycerol phosphate synthase n=2 Tax=Cys... 47 7e-04 UniRef50_A8ESR6 FMN-dependent alpha-hydroxy acid dehydrogenase n... 47 7e-04 UniRef50_Q02YU5 Putative N-acetylmannosamine-6-phosphate 2-epime... 47 7e-04 UniRef50_C5EVU6 NADH:flavin oxidoreductase n=1 Tax=Clostridiales... 47 7e-04 UniRef50_A3Q0B7 Ribulose-phosphate 3-epimerase n=3 Tax=Mycobacte... 47 7e-04 UniRef50_B0TE53 Biotin synthase n=2 Tax=Clostridia RepID=BIOB_HELMI 47 7e-04 UniRef50_A1UF85 Pyridoxine biosynthesis protein n=3 Tax=Mycobact... 47 8e-04 UniRef50_D0J1P6 Dihydrouridine synthase, DuS n=7 Tax=cellular or... 47 8e-04 UniRef50_C3RHP7 NADH:flavin oxidoreductase n=5 Tax=Bacteria RepI... 47 8e-04 UniRef50_B1KDM8 Dihydroorotate dehydrogenase n=26 Tax=Gammaprote... 46 9e-04 UniRef50_Q2RTX4 Dihydrouridine synthase TIM-barrel protein yjbN ... 46 9e-04 UniRef50_A4RQU5 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 46 9e-04 UniRef50_B2I678 2-nitropropane dioxygenase NPD n=9 Tax=Bacteria ... 46 9e-04 UniRef50_C2KD02 Enoyl-[acyl-carrier-protein] reductase (NADH) n=... 46 9e-04 UniRef50_C7Q7H9 (S)-2-hydroxy-acid oxidase n=2 Tax=Actinomycetal... 46 9e-04 UniRef50_P59441 Putative N-acetylmannosamine-6-phosphate 2-epime... 46 9e-04 UniRef50_Q03148 Pyridoxine biosynthesis protein SNZ1 n=262 Tax=c... 46 0.001 UniRef50_A4RSY3 Inosine 5'-phosphate dehydrogenase n=6 Tax=Eukar... 46 0.001 UniRef50_Q6BVL8 DEHA2C01584p n=4 Tax=Dikarya RepID=Q6BVL8_DEBHA 46 0.001 UniRef50_A9A3M4 Dihydroorotate dehydrogenase family protein n=2 ... 46 0.001 UniRef50_D1B5R0 Dihydrouridine synthase DuS n=1 Tax=Thermanaerov... 46 0.001 UniRef50_Q8U472 Hexulose-6-phosphate synthase (D-arabino 3-hexul... 46 0.001 UniRef50_Q88LF2 tRNA-dihydrouridine synthase C n=38 Tax=cellular... 46 0.001 UniRef50_C2D6B3 Dihydroorotate oxidase n=1 Tax=Atopobium vaginae... 46 0.001 UniRef50_A7AWB5 Dihydrouridine synthase (Dus) domain containing ... 46 0.001 UniRef50_Q2W414 Dioxygenase related to 2-nitropropane dioxygenas... 46 0.001 UniRef50_C2BGB2 NADH:flavin oxidoreductase n=1 Tax=Anaerococcus ... 46 0.001 UniRef50_Q97FE2 NADH:flavin oxidoreductase n=1 Tax=Clostridium a... 46 0.001 UniRef50_D2LUG6 2,4-dienoyl-CoA reductase (NADPH) n=1 Tax=Bacill... 46 0.001 UniRef50_UPI0001C36786 dihydroorotate dehydrogenase family prote... 46 0.001 UniRef50_A6LJ97 Dihydroorotate dehydrogenase family protein n=2 ... 46 0.001 UniRef50_C6A1L2 Dihydroorotate dehydrogenase family protein n=1 ... 46 0.001 UniRef50_O29870 Acetyl-CoA decarbonylase/synthase complex subuni... 46 0.001 UniRef50_A8ICF9 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 46 0.001 UniRef50_A9V413 Predicted protein n=1 Tax=Monosiga brevicollis R... 46 0.001 UniRef50_Q8TXQ6 tRNA-dihydrouridine synthase n=1 Tax=Methanopyru... 46 0.001 UniRef50_B0VIM3 Dihydroorotate dehydrogenase, catalytic subunit ... 46 0.001 UniRef50_C7GCF3 Regulatory protein TENI n=8 Tax=Clostridiales Re... 46 0.001 UniRef50_B6HPE4 Pc22g00300 protein n=3 Tax=Leotiomyceta RepID=B6... 46 0.001 UniRef50_C2CV35 Possible isopentenyl pyrophosphate isomerase n=1... 46 0.001 UniRef50_A3DN81 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 46 0.001 UniRef50_B0CNE7 Predicted protein n=3 Tax=Agaricales RepID=B0CNE... 46 0.001 UniRef50_A2R578 Contig An15c0120, complete genome n=29 Tax=Leoti... 46 0.001 UniRef50_A8PLS2 tRNA-dihydrouridine synthase A n=1 Tax=Rickettsi... 46 0.001 UniRef50_Q1QZQ6 Dihydrouridine synthase, DuS n=1 Tax=Chromohalob... 46 0.001 UniRef50_Q1J585 Enoyl-reductase (NADH) n=1 Tax=Streptococcus pyo... 46 0.001 UniRef50_UPI000185BF4A 2-nitropropane dioxygenase, NPD n=1 Tax=C... 46 0.001 UniRef50_B0KBD0 NADH:flavin oxidoreductase/NADH oxidase n=11 Tax... 46 0.001 UniRef50_D1VVG5 Putative enoyl-(Acyl-carrier-protein) reductase ... 46 0.001 UniRef50_Q12NI3 NADH:flavin oxidoreductase/NADH oxidase n=14 Tax... 46 0.001 UniRef50_Q4QEB3 Inosine-5'-monophosphate dehydrogenase n=8 Tax=c... 46 0.001 UniRef50_C7QGH7 Thiazole biosynthesis family protein n=2 Tax=Act... 46 0.001 UniRef50_B1MW76 NADH:flavin oxidoreductase, Old Yellow Enzyme fa... 46 0.001 UniRef50_O29513 Dihydroorotate dehydrogenase n=3 Tax=Archaeoglob... 46 0.002 UniRef50_Q39TJ5 2,4-dienoyl-CoA reductase n=1 Tax=Geobacter meta... 46 0.002 UniRef50_D1Z6W7 Whole genome shotgun sequence assembly, scaffold... 46 0.002 UniRef50_UPI0001C41BF5 inosine-5''-monophosphate dehydrogenase G... 46 0.002 UniRef50_Q47R37 Thiazole synthase n=124 Tax=Bacteria RepID=THIG_... 46 0.002 UniRef50_C0QYH6 Dihydroorotate dehydrogenase n=2 Tax=Brachyspira... 46 0.002 UniRef50_A6NSI8 Putative uncharacterized protein n=1 Tax=Bactero... 46 0.002 UniRef50_UPI000169A137 bifunctional sulfur carrier protein/thiaz... 46 0.002 UniRef50_UPI0001C31DA9 dihydroorotate dehydrogenase family prote... 46 0.002 UniRef50_Q2FKX6 Tryptophan synthase alpha chain n=1 Tax=Methanos... 46 0.002 UniRef50_Q3ZZ14 Indole-3-glycerol phosphate synthase n=5 Tax=Deh... 46 0.002 UniRef50_Q1IWK7 Fructose-1,6-bisphosphate aldolase, class II n=3... 45 0.002 UniRef50_A8VXV8 Tryptophan synthase alpha chain n=2 Tax=Bacillus... 45 0.002 UniRef50_Q3A2H5 NADH oxidase n=1 Tax=Pelobacter carbinolicus DSM... 45 0.002 UniRef50_C8P8F1 2-enoate reductase n=1 Tax=Lactobacillus antri D... 45 0.002 UniRef50_B6KJZ7 Inosine-5'-monophosphate dehydrogenase n=4 Tax=A... 45 0.002 UniRef50_A8MLA4 NADH:flavin oxidoreductase/NADH oxidase n=3 Tax=... 45 0.002 UniRef50_B7CCQ8 Putative uncharacterized protein n=1 Tax=Eubacte... 45 0.002 UniRef50_Q483F7 FMN-dependent dehydrogenase n=1 Tax=Colwellia ps... 45 0.002 UniRef50_C8PNQ6 Putative N-acetylmannosamine-6-phosphate epimera... 45 0.002 UniRef50_A8RW12 Putative uncharacterized protein n=2 Tax=Clostri... 45 0.002 UniRef50_A8VW59 Argininosuccinate synthase n=1 Tax=Bacillus sele... 45 0.002 UniRef50_UPI0000586CAD PREDICTED: similar to Dus1l protein n=1 T... 45 0.002 UniRef50_Q163H4 L-lactate dehydrogenase, putative n=19 Tax=Rhodo... 45 0.002 UniRef50_C0C2K5 Putative uncharacterized protein n=1 Tax=Clostri... 45 0.002 UniRef50_B8C389 Predicted protein n=1 Tax=Thalassiosira pseudona... 45 0.002 UniRef50_A1ALX2 Indole-3-glycerol phosphate synthase n=4 Tax=Des... 45 0.002 UniRef50_P00937 Indole-3-glycerol phosphate synthase n=12 Tax=Di... 45 0.002 UniRef50_C5RFG0 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 45 0.002 UniRef50_A0CRF7 Chromosome undetermined scaffold_25, whole genom... 45 0.002 UniRef50_B4YSU4 BaiH n=2 Tax=Clostridium hylemonae RepID=B4YSU4_... 45 0.002 UniRef50_UPI0001C41EDE NADH-dependent flavin oxidoreductase n=1 ... 45 0.002 UniRef50_C5EWF6 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 45 0.002 UniRef50_B8F9B4 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 45 0.002 UniRef50_D1VVP0 Putative enoyl-(Acyl-carrier-protein) reductase ... 45 0.002 UniRef50_B0MII1 Putative uncharacterized protein n=4 Tax=Clostri... 45 0.002 UniRef50_A3CL85 NADH-dependent flavin oxidoreductase, putative n... 45 0.002 UniRef50_C0W3B1 Indole-3-glycerol-phosphate synthase n=1 Tax=Act... 45 0.002 UniRef50_B6KUE9 Dihydrouridine synthase domain-containing protei... 45 0.002 UniRef50_D2RSQ6 Inosine-5'-monophosphate dehydrogenase n=1 Tax=H... 45 0.002 UniRef50_Q04VP3 TRNA-dihydrouridine synthase n=4 Tax=Leptospira ... 45 0.002 UniRef50_Q0CMD2 TRNA-dihydrouridine synthase 1 n=18 Tax=Leotiomy... 45 0.002 UniRef50_P20839 Inosine-5'-monophosphate dehydrogenase 1 n=225 T... 45 0.002 UniRef50_Q814I1 GMP reductase n=106 Tax=Bacteria RepID=GUAC_BACCR 45 0.003 UniRef50_D2UY23 Inosine-5-monophosphate dehydrogenase n=1 Tax=Na... 45 0.003 UniRef50_A4FBL7 Dihydroorotate dehydrogenase n=1 Tax=Saccharopol... 45 0.003 UniRef50_B6W8L3 Putative uncharacterized protein n=1 Tax=Anaeroc... 45 0.003 UniRef50_B0XNW3 Dihydrouridine synthase family protein, putative... 45 0.003 UniRef50_Q9HJH3 Geranylgeranylglyceryl phosphate synthase n=4 Ta... 45 0.003 UniRef50_Q9SA34 Probable inosine-5'-monophosphate dehydrogenase ... 45 0.003 UniRef50_A5IK84 Dihydroorotate dehydrogenase n=10 Tax=Thermotoga... 45 0.003 UniRef50_B2V534 Dihydrouridine synthase family protein n=29 Tax=... 45 0.003 UniRef50_B2WJB5 L-lactate dehydrogenase n=2 Tax=Pleosporineae Re... 45 0.003 UniRef50_C8S5Y9 Photosystem I assembly BtpA n=1 Tax=Ferroglobus ... 45 0.003 UniRef50_B1LIF1 Fructose-bisphosphate aldolase, class II n=56 Ta... 45 0.003 UniRef50_C7PJE8 2-nitropropane dioxygenase NPD n=3 Tax=Bacteroid... 45 0.003 UniRef50_Q15VZ0 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 45 0.003 UniRef50_P32370 NADH-dependent flavin oxidoreductase n=4 Tax=Clo... 45 0.003 UniRef50_Q893R4 Regulatory protein tenI n=1 Tax=Clostridium teta... 44 0.003 UniRef50_B8FFK8 Fructose-bisphosphate aldolase n=1 Tax=Desulfati... 44 0.003 UniRef50_Q2NEH7 Putative uncharacterized protein n=1 Tax=Methano... 44 0.003 UniRef50_Q6C002 YALI0F29205p n=1 Tax=Yarrowia lipolytica RepID=Q... 44 0.003 UniRef50_D1N9H4 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 44 0.003 UniRef50_B8DSF9 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 44 0.003 UniRef50_D2RCD8 Thiazole biosynthesis protein ThiG n=2 Tax=Gardn... 44 0.003 UniRef50_A3HW33 D-arabino 3-hexulose 6-phosphate formaldehyde ly... 44 0.003 UniRef50_Q03DI2 Inosine-5'-monophosphate dehydrogenase n=4 Tax=L... 44 0.003 UniRef50_C1I264 Enoate reductase n=1 Tax=Clostridium sp. 7_2_43F... 44 0.003 UniRef50_A6TRV9 Ribulose-phosphate 3-epimerase n=2 Tax=Bacteria ... 44 0.003 UniRef50_B3PIM3 Probable FMN oxidoreductase n=1 Tax=Cellvibrio j... 44 0.003 UniRef50_D2RKZ8 2-nitropropane dioxygenase NPD n=10 Tax=Firmicut... 44 0.003 UniRef50_Q6GJZ4 NADH:flavin oxidoreductase/NADH oxidase family p... 44 0.004 UniRef50_Q8EAJ0 tRNA-dihydrouridine synthase A n=121 Tax=Bacteri... 44 0.004 UniRef50_Q3A5M1 NADH:flavin oxidoreductase, Old Yellow Enzyme fa... 44 0.004 UniRef50_D1B5N0 Dihydroorotate dehydrogenase family protein n=1 ... 44 0.004 UniRef50_D2S4B7 (S)-2-hydroxy-acid oxidase n=1 Tax=Geodermatophi... 44 0.004 UniRef50_C4SJL7 Dioxygenases to 2-nitropropane dioxygenase n=1 T... 44 0.004 UniRef50_Q46QV8 2-nitropropane dioxygenase, NPD n=16 Tax=cellula... 44 0.004 UniRef50_B7J4N8 tRNA-dihydrouridine synthase A n=2 Tax=Acidithio... 44 0.004 UniRef50_A0M3J4 2-nitropropane dioxygenase family protein n=73 T... 44 0.004 UniRef50_Q11PE3 NADH:flavin oxidoreductase family protein n=10 T... 44 0.004 UniRef50_B0UE51 FMN-dependent alpha-hydroxy acid dehydrogenase n... 44 0.004 UniRef50_A1S6C3 2,4-dienoyl-CoA reductase n=3 Tax=Proteobacteria... 44 0.004 UniRef50_Q5XQ99 Glutamate synthase domain 2 n=2 Tax=environmenta... 44 0.004 UniRef50_A2QA98 Similarity to hypothetical protein SPBC36B7.04 -... 44 0.004 UniRef50_A3N1J3 NADPH dehydrogenase n=18 Tax=Bacteria RepID=A3N1... 44 0.004 UniRef50_A4T8N9 2-nitropropane dioxygenase, NPD n=9 Tax=Mycobact... 44 0.004 UniRef50_Q6CF62 YALI0B09999p n=1 Tax=Yarrowia lipolytica RepID=Q... 44 0.004 UniRef50_P53759 tRNA-dihydrouridine synthase 1 n=19 Tax=Ascomyco... 44 0.004 UniRef50_A3JUQ7 FMN-dependent alpha-hydroxy acid dehydrogenase f... 44 0.004 UniRef50_Q55710 Thiazole synthase n=253 Tax=cellular organisms R... 44 0.004 UniRef50_C7LVH6 Glutamate synthase (Ferredoxin) n=3 Tax=Desulfov... 44 0.004 UniRef50_C9L8L9 Thiamine-phosphate pyrophosphorylase n=1 Tax=Bla... 44 0.004 UniRef50_C7Q1I4 FMN-dependent alpha-hydroxy acid dehydrogenase n... 44 0.004 UniRef50_Q53318 Conserved protein n=2 Tax=Methanothermobacter th... 44 0.004 UniRef50_Q3AL94 Indole-3-glycerol phosphate synthase n=13 Tax=Cy... 44 0.004 UniRef50_A8ZX83 Dihydrouridine synthase DuS n=1 Tax=Desulfococcu... 44 0.004 UniRef50_P32382 NADH oxidase n=1 Tax=Thermoanaerobacter brockii ... 44 0.004 UniRef50_Q3B2I1 Dihydroorotate oxidase B, catalytic subunit n=12... 44 0.005 UniRef50_C4IB41 Dihydroorotate dehydrogenase family protein n=4 ... 44 0.005 UniRef50_Q47X34 Oxidoreductase, FAD/FMN-binding n=9 Tax=Proteoba... 44 0.005 UniRef50_Q1GF08 L-lactate dehydrogenase (Cytochrome) n=10 Tax=Rh... 44 0.005 UniRef50_UPI000185BEDF putative enterobactin synthetase componen... 44 0.005 UniRef50_Q1D6Y7 Oxidoreductase, FAD/FMN-binding n=2 Tax=Myxococc... 44 0.005 UniRef50_B5WIG7 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 44 0.005 UniRef50_P49572 Indole-3-glycerol phosphate synthase, chloroplas... 44 0.005 UniRef50_Q9KT00 tRNA-dihydrouridine synthase C n=75 Tax=Gammapro... 44 0.005 UniRef50_Q8I2U5 Inosine-5'-monophosphate dehydrogenase n=7 Tax=A... 44 0.005 UniRef50_Q4D174 Dihydrouridine synthase (Dus), putative n=2 Tax=... 44 0.005 UniRef50_Q5SMC7 tRNA-dihydrouridine synthase n=3 Tax=Thermus Rep... 44 0.005 UniRef50_Q7NHC3 Glr2614 protein n=2 Tax=Cyanobacteria RepID=Q7NH... 44 0.005 UniRef50_Q0K0C9 2-Nitropropane dioxygenase n=54 Tax=cellular org... 44 0.005 UniRef50_D2R4W3 Inosine-5'-monophosphate dehydrogenase n=9 Tax=B... 44 0.005 UniRef50_Q9YBU2 Inosine-5'-monophosphate dehydrogenase n=1 Tax=A... 44 0.005 UniRef50_Q4JVZ5 Thiazole synthase n=91 Tax=Bacteria RepID=THIG_C... 44 0.005 UniRef50_A9UW45 Predicted protein n=1 Tax=Monosiga brevicollis R... 44 0.005 UniRef50_C6C204 Radical SAM domain protein n=2 Tax=Desulfovibrio... 44 0.005 UniRef50_C5EPN9 Fructose-1,6-bisphosphate aldolase n=2 Tax=Clost... 44 0.006 UniRef50_Q5QZN5 NADH:flavin oxidoreductases, Old Yellow Enzyme f... 44 0.006 UniRef50_B5YA94 Thiazole biosynthesis protein ThiG n=2 Tax=Dicty... 44 0.006 UniRef50_B0SH97 Dioxygenase n=6 Tax=Leptospira RepID=B0SH97_LEPBA 44 0.006 UniRef50_Q040I4 L-lactate dehydrogenase (FMN-dependent) related ... 44 0.006 UniRef50_A4EBM5 Putative uncharacterized protein n=2 Tax=Bacteri... 44 0.006 UniRef50_C5R8W8 Dihydroorotate dehydrogenase B, catalytic subuni... 44 0.006 UniRef50_Q2SLE2 L-lactate dehydrogenase (FMN-dependent) and rela... 44 0.006 UniRef50_Q7RX85 Putative uncharacterized protein n=1 Tax=Neurosp... 44 0.006 UniRef50_UPI0001C3656A NADH:flavin oxidoreductase n=1 Tax=Clostr... 44 0.006 UniRef50_A2EKA7 Dihydroorotate dehydrogenase family protein n=3 ... 44 0.006 UniRef50_Q5WK54 Putative N-acetylmannosamine-6-phosphate 2-epime... 44 0.006 UniRef50_A8ZZX0 Indole-3-glycerol phosphate synthase n=1 Tax=Des... 44 0.006 UniRef50_D2BWA1 2-nitropropane dioxygenase NPD n=1 Tax=Dickeya d... 44 0.006 UniRef50_A4FDB3 2,4-dienoyl-CoA reductase n=4 Tax=Actinomycetale... 44 0.006 UniRef50_Q0W8E1 Dihydroorotate dehydrogenase n=18 Tax=Euryarchae... 44 0.007 UniRef50_Q471J2 NADH:flavin oxidoreductase/NADH oxidase n=7 Tax=... 44 0.007 UniRef50_A3DJQ8 NADH:flavin oxidoreductase/NADH oxidase n=3 Tax=... 44 0.007 UniRef50_D1N5U0 Dihydrouridine synthase DuS n=1 Tax=Victivallis ... 44 0.007 UniRef50_P30300 Glycerol uptake operon antiterminator regulatory... 44 0.007 UniRef50_B1ZS75 2-nitropropane dioxygenase NPD n=2 Tax=Bacteria ... 44 0.007 UniRef50_A4E8R9 Putative uncharacterized protein n=1 Tax=Collins... 44 0.007 UniRef50_A5UUL3 Thiamine-phosphate pyrophosphorylase n=5 Tax=Bac... 44 0.007 UniRef50_Q98NG5 Oxidoreductase n=4 Tax=Proteobacteria RepID=Q98N... 44 0.007 UniRef50_B7APY3 Putative uncharacterized protein n=1 Tax=Bactero... 44 0.007 UniRef50_C7T9L6 Fructose-bisphosphate aldolase n=4 Tax=Bacilli R... 44 0.007 UniRef50_Q0VNU6 NADH:flavin oxidoreductase/NADH Oxidase, putativ... 43 0.007 UniRef50_C8PKB5 Dioxygenase n=1 Tax=Campylobacter gracilis RM326... 43 0.007 UniRef50_C5RMS0 Tryptophan synthase alpha chain n=1 Tax=Clostrid... 43 0.007 UniRef50_UPI0001789C76 2-nitropropane dioxygenase NPD n=1 Tax=Ge... 43 0.007 UniRef50_B8ZUG3 Pyridoxal biosynthesis lyase pdxS n=332 Tax=cell... 43 0.007 UniRef50_A4VL89 Morphinone reductase n=2 Tax=cellular organisms ... 43 0.007 UniRef50_Q54QJ2 tRNA-dihydrouridine synthase 2-like protein n=1 ... 43 0.007 UniRef50_Q38V36 Putative N-acetylmannosamine-6-phosphate 2-epime... 43 0.007 UniRef50_D1PX20 Inosine-5'-monophosphate dehydrogenase n=1 Tax=P... 43 0.007 UniRef50_Q2FTP1 Isopentenyl-diphosphate delta-isomerase, FMN-dep... 43 0.008 UniRef50_Q2LPX4 N-(5'-phosphoribosyl)anthranilate isomerase n=1 ... 43 0.008 UniRef50_A4XGU3 Biotin synthase n=40 Tax=Bacteria RepID=A4XGU3_C... 43 0.008 UniRef50_C6IIM3 Dihydrouridine synthase n=15 Tax=Bacteroides Rep... 43 0.008 UniRef50_A9KRF8 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=... 43 0.008 UniRef50_O83945 Probable tRNA-dihydrouridine synthase n=4 Tax=Tr... 43 0.008 UniRef50_C7DGQ8 Geranylgeranylglyceryl phosphate synthase family... 43 0.008 UniRef50_A9BIU8 Dihydroorotate dehydrogenase family protein n=10... 43 0.008 UniRef50_A6G755 Indole-3-glycerol-phosphate synthase n=1 Tax=Ple... 43 0.008 UniRef50_A5USQ4 Indole-3-glycerol phosphate synthase n=8 Tax=Bac... 43 0.008 UniRef50_A4RM51 Putative uncharacterized protein n=2 Tax=Sacchar... 43 0.008 UniRef50_Q01NZ1 Thiazole synthase n=5 Tax=Bacteria RepID=THIG_SOLUE 43 0.008 UniRef50_A6BK55 Putative uncharacterized protein n=1 Tax=Dorea l... 43 0.008 UniRef50_P20409 N-(5'-phosphoribosyl)anthranilate isomerase n=20... 43 0.008 UniRef50_UPI00006A2AD3 UPI00006A2AD3 related cluster n=1 Tax=Xen... 43 0.008 UniRef50_C9XJU2 Dihydroorotate dehydrogenase, catalytic subunit ... 43 0.008 UniRef50_B8HFM3 TIM-barrel protein, nifR3 family n=4 Tax=Actinom... 43 0.009 UniRef50_B7RZ94 Dihydroorotate dehydrogenase family protein n=3 ... 43 0.009 UniRef50_Q1IKU8 2-nitropropane dioxygenase, NPD n=1 Tax=Candidat... 43 0.009 UniRef50_C6P7F3 Ketose-bisphosphate aldolase n=1 Tax=Sideroxydan... 43 0.009 UniRef50_Q1Q4L5 Similar to dihydroorotate oxidase (Dihydroorotat... 43 0.009 UniRef50_D1Z2Q9 N-(5'-phosphoribosyl)anthranilate isomerase n=1 ... 43 0.009 UniRef50_A3IFH8 Tryptophan synthase alpha chain n=2 Tax=Bacillac... 43 0.009 UniRef50_D2RJE3 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 43 0.009 UniRef50_A6DTA2 Inosine-5'-monophosphate dehydrogenase n=2 Tax=L... 43 0.009 UniRef50_C1DXM0 Thiamine-phosphate pyrophosphorylase (TMPpyropho... 43 0.009 UniRef50_C0EUE6 Putative uncharacterized protein n=1 Tax=Eubacte... 43 0.009 UniRef50_UPI0000D55C2D PREDICTED: similar to conserved hypotheti... 43 0.010 UniRef50_B9Y366 Putative uncharacterized protein n=1 Tax=Holdema... 43 0.010 UniRef50_C6Q0J2 Dihydroorotate dehydrogenase family protein n=1 ... 43 0.010 UniRef50_Q8DTK2 Putative enoyl-(Acyl-carrier-protein) reductase ... 43 0.010 UniRef50_Q2SLZ7 NADH:flavin oxidoreductase, Old Yellow Enzyme fa... 43 0.010 UniRef50_C0GEC4 Thiamine monophosphate synthase n=1 Tax=Dethioba... 43 0.010 UniRef50_Q5NYR5 Putative uncharacterized protein n=1 Tax=Aromato... 43 0.010 UniRef50_A5ZMJ6 Thiamine-phosphate pyrophosphorylase n=1 Tax=Rum... 43 0.010 UniRef50_A8IEL8 Glycolate oxidase n=3 Tax=Viridiplantae RepID=A8... 43 0.010 UniRef50_A8MDA4 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 43 0.010 UniRef50_C1XX24 Fructose-bisphosphate aldolase n=1 Tax=Meiotherm... 43 0.010 UniRef50_B0GA01 Putative uncharacterized protein n=2 Tax=Clostri... 43 0.010 UniRef50_Q3MD83 FMN-dependent alpha-hydroxy acid dehydrogenase n... 43 0.011 UniRef50_B8KT97 NADH:flavin oxidoreductase, old yellow enzyme fa... 43 0.011 >UniRef50_B0TDM7 Imidazole glycerol phosphate synthase subunit hisF n=157 Tax=root RepID=HIS6_HELMI Length = 261 Score = 269 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 121/257 (47%), Positives = 160/257 (62%), Gaps = 1/257 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV G+VVKG F N GD V LA Y +EGADE+VF DITASSDGR Sbjct: 1 MLAKRIIPCLDVHGGRVVKGTNFVNLRDAGDPVELAAVYDKEGADEVVFLDITASSDGRA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R AE + IPF V GG++S+ED ++L GADKIS+N+ A+ P LI+ A +F Sbjct: 61 IMLDVVRRTAEEVFIPFTVGGGLRSVEDIREMLKAGADKISLNTSAVQTPKLISDGAWKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQY-TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 G QCIVV ID + V + + T + L+W + V++ GAGEI+L M Sbjct: 121 GSQCIVVAIDARRRRDAEGNPVEGWEVYTHGGRKPTGIDVLEWARRVEELGAGEILLTSM 180 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG ++GYD+ + V E +P+IASGG G ++H +E D ALAAS+FH + Sbjct: 181 DKDGTKDGYDIPLTRAVSEAVTIPVIASGGVGNLDHIVEGLTVGKADAALAASIFHYREY 240 Query: 240 NIGELKAYLATQGVEIR 256 IGE K YL +GV +R Sbjct: 241 TIGETKEYLRERGVHVR 257 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 37/112 (33%) Query: 21 VQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA 80 D++ A+R E GA E++ + D V+E + IP + Sbjct: 149 THGGRKPTGIDVLEWARRVEELGAGEILLTSMDKDGTKDGYDIPLTRAVSEAVTIPVIAS 208 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 GG+ +L+ + L+ G ++ + + + V Sbjct: 209 GGVGNLDHIVEGLTVGKADAALAASIFHYREYTIGETKEYLRERGVHVRQWR 260 >UniRef50_B2V9M8 Imidazole glycerol phosphate synthase subunit hisF n=10 Tax=Bacteria RepID=HIS6_SULSY Length = 252 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 121/257 (47%), Positives = 159/257 (61%), Gaps = 5/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV G+VVKGV F N GD V +A Y +EGADELVF DITASS+ R Sbjct: 1 MLAKRIIPCLDVDKGRVVKGVNFVNLIDAGDPVEIASVYDKEGADELVFLDITASSEDRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V + AE + +P V GG++SLED K+L GADK+SIN+ A+ +P+L+ A RF Sbjct: 61 IILDVVKKTAETVFMPLTVGGGVRSLEDIRKLLENGADKVSINTAAVKNPSLVENAAIRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IVV ID E T + ++W + V+ GAGEI+L M+ Sbjct: 121 GSSTIVVAIDAKKVGENKW-----EVYIHGGRTPTGIDAIEWAKAVESLGAGEILLTSMD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG ++GYD+E K V E +P+IASGGAG ++HF EAF D LAAS+FH + I Sbjct: 176 KDGTKSGYDIELTKAVSEAVKIPVIASGGAGNVQHFYEAFEYGKADACLAASLFHFKEIE 235 Query: 241 IGELKAYLATQGVEIRI 257 I ELK YL +G+ +R+ Sbjct: 236 ISELKNYLKNKGINVRL 252 >UniRef50_C7P985 Imidazole glycerol phosphate synthase subunit hisF n=5 Tax=cellular organisms RepID=C7P985_METFA Length = 272 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 114/272 (41%), Positives = 160/272 (58%), Gaps = 14/272 (5%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KRIIPCLD++DG+VVKG +F N GD V LA+ Y +EGADELVF DITAS++ R Sbjct: 1 MLTKRIIPCLDIKDGRVVKGTKFLNLRDAGDPVELAQLYDDEGADELVFLDITASAEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R AE + IP V GGIKS+ED KIL GADKISIN+ A+ +P LI ++ F Sbjct: 61 IIIDVVERTAEKVFIPLTVGGGIKSIEDFRKILRAGADKISINTAAVKNPNLIKEASEIF 120 Query: 121 GVQCIVVGIDTWY--------------DAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 G QC+VV ID + + + T + ++W ++V Sbjct: 121 GSQCVVVAIDAKRHYINEDEIDKIDKNVVKVEDGYCWFEVYIYGGRKETGIDAIEWAKKV 180 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 ++ GAGEI+L +++DG ++GYDL +++ + +P+IASGG G EH EAF D Sbjct: 181 EELGAGEILLTSIDKDGTKSGYDLILTREISKSVKLPVIASGGCGKPEHVYEAFVHGKAD 240 Query: 227 GALAASVFHKQIINIGELKAYLATQGVEIRIC 258 AL A + H + I E+K Y A +G+ +R+ Sbjct: 241 AALMAGILHYKEYTIEEIKKYCADRGIPMRLL 272 >UniRef50_C4L176 Imidazole glycerol phosphate synthase subunit hisF n=28 Tax=Bacteria RepID=HIS6_EXISA Length = 255 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 120/258 (46%), Positives = 165/258 (63%), Gaps = 8/258 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML +RIIPCLDV++G+VVKG++F IGD V +AK Y E GADELVF DITAS++ R Sbjct: 1 MLKRRIIPCLDVKEGRVVKGIEFVQLRDIGDPVEIAKYYDESGADELVFLDITASTERRQ 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 VS VA + IP V GGI+SLED + +L GADK+S+N+ A+ P+LI ADRF Sbjct: 61 TMLDVVSAVARKVFIPLTVGGGIRSLEDISSLLKAGADKVSLNTLAVESPSLIREAADRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIVV ID + + G+Y+V Y + T ++W ++V GAGE+++ MN Sbjct: 121 GSQCIVVAIDVKF--KDGEYYVYTY----GGKQKTDLLAVEWAKQVAALGAGELLVTSMN 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 QDG ++GYDL L+++REV +P+IASGGAG EH +EA VD AL AS+ H + Sbjct: 175 QDGKQSGYDLSILEQLREVVDIPIIASGGAGNAEHVVEALEK--VDAALLASILHDRKTT 232 Query: 241 IGELKAYLATQGVEIRIC 258 + E+K + + +R Sbjct: 233 VEEVKHVCKSHNLPMRFV 250 >UniRef50_A6UUZ9 Imidazole glycerol phosphate synthase subunit hisF n=27 Tax=cellular organisms RepID=HIS6_META3 Length = 275 Score = 260 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 18/275 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KRIIPCLD+++G+VVKG F GD V L+K Y E+GADELVF DI AS + R Sbjct: 1 MLTKRIIPCLDIKNGRVVKGTNFVELRDAGDPVELSKIYNEQGADELVFLDIGASHEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + A+ + IP V GGI++ +D +IL GADKIS+N+ A+ +P LI + ++ + Sbjct: 61 IIEHLVEKTADQVFIPLTVGGGIRTTDDFRRILRAGADKISVNTAAIHNPDLIKQSSELY 120 Query: 121 GVQCIVVGIDTWY------------------DAETGKYHVNQYTGDESRTRVTQWETLDW 162 G QC+VV ID+ + + T + ++W Sbjct: 121 GAQCVVVAIDSKRHYVNEEDLDSKQLEDKNVVKVDKNKYCWFEVFIYGGRKETGIDAIEW 180 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 + ++ GAGEI+L M+ DG ++GYD+E K + +P+IASGG G +H + F Sbjct: 181 AKTAEELGAGEILLTSMDADGTKDGYDIELTKSISTHIKLPVIASGGCGAPQHIHQVFEY 240 Query: 223 ADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D AL AS+ H + +GELK Y + + +R+ Sbjct: 241 GKADAALMASILHYREYTVGELKKYCMDKNIPMRL 275 >UniRef50_C9KKW6 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKW6_9FIRM Length = 252 Score = 259 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 114/257 (44%), Positives = 156/257 (60%), Gaps = 5/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M KRIIPCLDV+DG+VVKG F GD V LA RY EE ADELVF DITASSD R Sbjct: 1 MYTKRIIPCLDVKDGRVVKGTNFVGLRDAGDPVELAARYDEERADELVFLDITASSDNRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + A + IPF V GGI+++ED ++L GADK S+N+ A+ +P L+ A++F Sbjct: 61 TMVNVARDCASKVFIPFTVGGGIRTVEDMRRMLKAGADKTSLNTAAVKNPGLLKEGAEKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+ +D A ++ V T + L+WV++ GAGEI+L M+ Sbjct: 121 GRQCMVLAVDARR-AGNHRWEVY----VNGGRTPTGLDCLEWVKKAVALGAGEILLTSMD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG ++GYD+E + V + +VP+IASGGAG +EHF + D LAASVFH Sbjct: 176 ADGTKDGYDIELTRAVSDAVNVPVIASGGAGKLEHFYDVLTLGHADAVLAASVFHYGQFT 235 Query: 241 IGELKAYLATQGVEIRI 257 + ++K YL ++GVE+R Sbjct: 236 VRQVKEYLQSRGVEVRF 252 >UniRef50_Q12UY6 Imidazole glycerol phosphate synthase subunit hisF n=354 Tax=cellular organisms RepID=HIS6_METBU Length = 273 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 110/273 (40%), Positives = 152/273 (55%), Gaps = 16/273 (5%) Query: 1 MLAKRIIPCLDV----RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS 56 ML KRIIPCLDV G VVKGV+F + + GD V LAKRY E+GADELVF DITAS Sbjct: 1 MLTKRIIPCLDVTLDASGGTVVKGVEFVDLKKAGDPVDLAKRYNEQGADELVFLDITASH 60 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +GR + R A + IP V GGI S+ED +IL GADK+S+N+ A+ +P I Sbjct: 61 EGRSTMIDVIERTANEVFIPLTVGGGINSVEDVRQILRAGADKVSVNTAAVKNPEFIREA 120 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQ------------YTGDESRTRVTQWETLDWVQ 164 ++ FG QCIV ID + + T +T+ W + Sbjct: 121 SNIFGSQCIVTAIDCKRNLDVENNQDKTILELEDGTLAWYEVVIYGGREPTGLDTVQWAK 180 Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 +V++ G+GEI+L MN+DG +G+D+ KK+ E +P+IASGG G EH + F D Sbjct: 181 KVEELGSGEILLTSMNRDGTYDGFDIPITKKLSEELDIPIIASGGVGNPEHMYKGFVDGK 240 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D LAAS+FH + ++K L + + +R+ Sbjct: 241 ADAGLAASIFHFGEYTVRDVKEALRAKNIPVRL 273 >UniRef50_B9DIP1 Imidazole glycerol phosphate synthase subunit hisF n=224 Tax=Bacteria RepID=HIS6_STACT Length = 254 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 106/256 (41%), Positives = 160/256 (62%), Gaps = 4/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M+ KRIIPCLDV+DG+VVKGVQF+ IGD V LA Y E ADELVF DI+ + +G Sbjct: 1 MIKKRIIPCLDVKDGRVVKGVQFKGLRDIGDPVALAAYYNAELADELVFLDISRTENGHQ 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + A + IP + GGI S +D + +L GADK+S+NS AL +P+L+ +++F Sbjct: 61 MMLDIIEETASKLFIPLTIGGGISSTDDISTLLKHGADKVSLNSSALRNPSLVKEASEKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI + +D ++ E + + + T LDWV++V+ GAGE+++ M+ Sbjct: 121 GSQCICIAVDAKWEDERNDWFCYTH----GGKQPTDIRVLDWVRQVEYLGAGELLVTSMD 176 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGV+ G+D + L ++ V +P+IASGG G +HF++ F+ +V LAAS+FH + Sbjct: 177 YDGVKQGFDHQLLNQINTVVSIPVIASGGGGNAQHFVDLFQQTNVSAGLAASIFHDKETT 236 Query: 241 IGELKAYLATQGVEIR 256 IG +K YL +GV++R Sbjct: 237 IGAVKTYLKDKGVDVR 252 >UniRef50_B5YIB7 Imidazole glycerol phosphate synthase subunit hisF n=5 Tax=cellular organisms RepID=HIS6_THEYD Length = 278 Score = 249 bits (637), Expect = 5e-65, Method: Composition-based stats. Identities = 119/278 (42%), Positives = 161/278 (57%), Gaps = 21/278 (7%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV+DG+VVKGV F N GD V A Y EE ADELVF D+TAS + R Sbjct: 1 MLAKRIIPCLDVKDGRVVKGVNFLNLRDAGDPVENALYYNEEEADELVFLDVTASHEKRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R A V+ +P V GGIKSL+D +L+ GADK+SIN+ A+ DP I + + RF Sbjct: 61 IIIDVVERTASVVFMPLTVGGGIKSLDDIRDLLNAGADKVSINTTAVKDPYFIQKASTRF 120 Query: 121 GVQCIVVGIDTWYDAET---------------------GKYHVNQYTGDESRTRVTQWET 159 G QCIV+ ID + K + + Sbjct: 121 GSQCIVIAIDAKRVDKNFNPKAYPPESWFDDKELSDVLYKEDSRFVLSTHGGRLMRPIDA 180 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 + W +++++ GAGEI+L M++DG + GYD+E + + E +P+IASGGAGT+EH EA Sbjct: 181 IAWAKKMEEFGAGEILLTSMDRDGTKEGYDIELTRAISEAVSIPVIASGGAGTLEHLYEA 240 Query: 220 FRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 F A D ALAAS+FH + +I E K +L +G+ +RI Sbjct: 241 FAYAKADAALAASIFHFREYSIREAKEFLRQKGIPVRI 278 >UniRef50_Q8DJN7 Imidazole glycerol phosphate synthase subunit hisF n=55 Tax=cellular organisms RepID=HIS6_THEEB Length = 281 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 111/256 (43%), Positives = 149/256 (58%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRI+PCLDV+ G+VVKGV F N GD V LA+ Y GADELVF DITA+ + R Sbjct: 2 MLAKRILPCLDVKAGRVVKGVNFVNLRDAGDPVELAQAYNAAGADELVFLDITATHEERN 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R A+ + IP V GGI+SL +L GADK+S+NS A+ P L+ + +DRF Sbjct: 62 ILIDVVYRTADQVFIPLTVGGGIQSLTMIKDLLRAGADKVSLNSAAVRQPDLVNQASDRF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIVV ID + + T + + W E+ KRGAGE+++ M+ Sbjct: 122 GAQCIVVAIDARREPDCAPDQPRWQVYVRGGREATGLDAVAWAVEMAKRGAGELLVTSMD 181 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG + GYDLE + + E +P+IASGGAGT EH A + + AL AS+ H + Sbjct: 182 ADGTQAGYDLELTRAIAERVEIPVIASGGAGTCEHIRAALVEGKAEAALLASLLHYGQLT 241 Query: 241 IGELKAYLATQGVEIR 256 I ++K YL V +R Sbjct: 242 IAQIKGYLHQHQVPVR 257 >UniRef50_B8FFL4 Imidazole glycerol phosphate synthase subunit hisF n=19 Tax=cellular organisms RepID=HIS6_DESAA Length = 260 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 111/256 (43%), Positives = 157/256 (61%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML+KR+I CLDVRDG+ KG++F+ + IGD V +A+ Y E G DELVFYDITAS + R Sbjct: 1 MLSKRVIVCLDVRDGKTTKGIKFKGNVDIGDPVDMARVYYEAGCDELVFYDITASHEKRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V RVAE I IPF V GGI S+ED +L GA+KIS+NS A+ +P +IT+ A+ F Sbjct: 61 IMIDVVRRVAETIFIPFSVGGGISSVEDMRDVLLAGAEKISVNSAAVKNPKIITQGAEAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+G+D ++ K + L W QE ++ GAGEI LN ++ Sbjct: 121 GNQCVVLGMDVKKVEKSEKIPSGYEIVINGGRTYMGIDALWWAQEGERLGAGEICLNSID 180 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG + GY+LE + E ++P+IASGG G +H + ++ D AL AS+ H Sbjct: 181 ADGTKEGYELELTALISENVNIPVIASGGGGIPQHLGDVLKEGKADAALIASMVHYGTYT 240 Query: 241 IGELKAYLATQGVEIR 256 I E+K +L +QG+ +R Sbjct: 241 IPEIKDHLKSQGISVR 256 >UniRef50_Q18JI3 Imidazole glycerol phosphate synthase subunit hisF n=36 Tax=cellular organisms RepID=HIS6_HALWD Length = 270 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 111/269 (41%), Positives = 144/269 (53%), Gaps = 13/269 (4%) Query: 1 MLAKRIIPCLDVR---DGQ--VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS 55 ML KRIIPC+DV DG V G+ F + E GD V +AK+Y GADE VF DITAS Sbjct: 1 MLTKRIIPCIDVDLDEDGNPAVYTGINFEDLEYTGDPVEMAKQYNMAGADEFVFLDITAS 60 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + GR VSRVA+ I IP V GGI++ +D L GADK+SIN+ AL P LIT Sbjct: 61 AVGRETMLETVSRVADEIFIPLTVGGGIRTRDDIKSTLRAGADKVSINTAALETPELITT 120 Query: 116 LADRFGVQCIVVGIDTWYDAETG--------KYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 A FG QCIV+ +D + + T + L+WV E + Sbjct: 121 GASAFGSQCIVISVDARRRFDEQGENYLSVDGESCWFECTVKGGREGTGIDVLEWVTEAE 180 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 RGAGE+ +N ++ DG ++GYD+ V + P+IAS G G+ E F +A D Sbjct: 181 TRGAGELFINSIDADGTQDGYDIPLTSAVCDAVSTPVIASSGCGSPADMHEVFTEAGADA 240 Query: 228 ALAASVFHKQIINIGELKAYLATQGVEIR 256 LAAS+FH +I K YL +GV IR Sbjct: 241 GLAASIFHFGEYSIEATKEYLDERGVPIR 269 >UniRef50_C0RFX3 Imidazole glycerol phosphate synthase subunit hisF n=420 Tax=cellular organisms RepID=HIS6_BRUMB Length = 261 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 108/256 (42%), Positives = 150/256 (58%), Gaps = 1/256 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L R+IPCLDV+DG+VVKGV F + GD V A+ Y GADEL F DITASSD R Sbjct: 3 LKARVIPCLDVKDGRVVKGVNFVDLIDAGDPVEAARAYDAAGADELCFLDITASSDNRET 62 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V+R AE +P V GG++ + D K+L GADK+SIN+ A+ +P + AD+FG Sbjct: 63 IFDVVARTAEQCFMPLTVGGGVRQVADIRKLLLAGADKVSINTAAVKNPEFVAEAADKFG 122 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QCIVV ID + G+ + + T + +++ Q+V GAGEI+L M++ Sbjct: 123 NQCIVVAIDAKKVSGAGEND-HWEIFTHGGRQPTGIDAVEFAQKVVDLGAGEILLTSMDR 181 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG + GYD+ + V + P+IASGG GT++H + RD LAAS+FH I Sbjct: 182 DGTKAGYDVALTRAVADSVRAPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTYTI 241 Query: 242 GELKAYLATQGVEIRI 257 GE K Y+A G+ +R+ Sbjct: 242 GEAKRYMAEAGIPMRL 257 >UniRef50_C4FS06 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FS06_9FIRM Length = 256 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 102/256 (39%), Positives = 158/256 (61%), Gaps = 1/256 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCL V +G+V GVQFR+ GD V A+RY +GADELV DITA+++ R Sbjct: 1 MLAKRIIPCLGVANGRVQNGVQFRDMVDAGDPVECAERYEIQGADELVLLDITATTEARK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V ++ + +P V GGI S+ED +++ GADK+SIN+ AL++P+LIT A +F Sbjct: 61 TFTDIVLNASDKVFMPLTVGGGITSVEDMTQLMKAGADKVSINTAALSNPSLITEGAKKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q IVV +D Y+ ++ + G + L+W +E RGAGE+++ ++ Sbjct: 121 GNQGIVVCLDVKYNPFEKMWYAYGH-GTSNDPGAQCKNALEWAKEAVDRGAGELLVTSID 179 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + G G+D+E + + EV VP+ A GGAG ++HF++ F +V GALA+++ H +++ Sbjct: 180 RHGTGLGFDIELYQALAEVVDVPVTAFGGAGNIQHFVDLFTKTNVTGALASALLHNKVLT 239 Query: 241 IGELKAYLATQGVEIR 256 I ++K L G+ +R Sbjct: 240 IKDIKKALHAAGIVVR 255 >UniRef50_A5FQU7 Histidine biosynthesis protein n=5 Tax=Dehalococcoides RepID=A5FQU7_DEHSB Length = 268 Score = 238 bits (609), Expect = 9e-62, Method: Composition-based stats. Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 1/257 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M +IIPCLDV+DG+VVK ++F + D A Y+++GADEL F DITA+ + Sbjct: 1 MKPIKIIPCLDVKDGRVVKEIKFTDMADARDPAEAAFVYSKQGADELAFLDITATIENSS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + WV ++ +P GGI++L+D + + G +++N+ + I + RF Sbjct: 61 IHTDWVKKIISKTSLPLIAGGGIRNLQDIENLFTLGVSNVALNTITPQNQEFIRKAVARF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I+V ID + H T + E +DW ++V+ GAG I+L + Sbjct: 121 GSERIIVAIDGIKNPPGNG-HPRLETVMPNGDDTHNLELVDWAKQVEALGAGAILLTSKD 179 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG ++G+D+E ++ V +P+IASGGAG +E A + LAASVFH IIN Sbjct: 180 TDGTKDGFDMEMIRSVTRAVSIPVIASGGAGKLEDMYAAIIEGKAQAVLAASVFHSGIIN 239 Query: 241 IGELKAYLATQGVEIRI 257 I ELK YL ++G+ + I Sbjct: 240 ISELKTYLHSKGIPVNI 256 >UniRef50_A0AG16 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Bacteria RepID=HIS4_LISW6 Length = 240 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D+++GQ V+ Q + + D + AK +A GA L D+ + +GR Sbjct: 1 MQIFPAIDLKNGQCVRLFQGDFSKKMIVNEDPIAQAKAFATGGATYLHIVDLDGALEGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + ++ E +P V GGI+SL L G D++ I S AL +P + ++ Sbjct: 61 VNLEIIQKMKEAATVPVQVGGGIRSLAQVDYYLDSGIDRVIIGSAALTNPDFLHAAVQKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I VGID N Y V+Q LD ++++K G I+ ++ Sbjct: 121 GPK-IAVGIDAK----------NGYVATSGWLEVSQVNYLDLAKQMEKVGVETIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G +LEQ+ +++ ++ LIASGG + EA + GA+A + I+ Sbjct: 170 RDGTLTGPNLEQMAALQKHVNIHLIASGGVSSRADL-EALSQLGLYGAIAGKALYNGHIS 228 Query: 241 IGELKA 246 + ++ Sbjct: 229 MSDVTE 234 >UniRef50_C4Z0A8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Clostridiales RepID=C4Z0A8_EUBE2 Length = 362 Score = 237 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 14/244 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQF---RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 R+ P +DV+DGQ V+ + +AK + E GA + D+ + G Sbjct: 1 MRLYPAIDVKDGQCVRLKKGLFNEVTVYSERPYEIAKGFEEAGAQFIHTVDLDGALKGHG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + ++ +++P + GGI++LE+ ++L G ++ I + A+ +P I DRF Sbjct: 61 VNAETIKKICSSVNVPVQMGGGIRTLENIQEVLDLGVYRVIIGTKAVENPDFIKAAIDRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IVVG+D + E +V+ L ++ G IV ++ Sbjct: 121 GAEHIVVGVDAK----------DGLVAIEGWEKVSDKTALSLALAMKDIGVQTIVYTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++EQ K + + + +IASGG M+ DA + GA+ +++ I+ Sbjct: 171 KDGMLAGPNVEQTKILSDKTGIDIIASGGMSCMDDLTH-INDAGIHGAIIGKAIYEKRID 229 Query: 241 IGEL 244 + E Sbjct: 230 LKEA 233 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 1/114 (0%) Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH 201 V G + V + + ++ GA I ++ +G + E +KK+ + Sbjct: 15 VRLKKGLFNEVTVYSERPYEIAKGFEEAGAQFIHTVDLDGALKGHGVNAETIKKICSSVN 74 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 VP+ GG T+E+ E D V + + + I + + + Sbjct: 75 VPVQMGGGIRTLENIQEVL-DLGVYRVIIGTKAVENPDFIKAAIDRFGAEHIVV 127 Score = 45.6 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 2/114 (1%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 +D +DG V ++ + LA + G +V+ DI+ + + Sbjct: 129 VDAKDGLV--AIEGWEKVSDKTALSLALAMKDIGVQTIVYTDISKDGMLAGPNVEQTKIL 186 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 ++ I +GG+ ++D I G I + + F Sbjct: 187 SDKTGIDIIASGGMSCMDDLTHINDAGIHGAIIGKAIYEKRIDLKEAVNLFESG 240 >UniRef50_Q2P3J8 Imidazole glycerol phosphate synthase subunit hisF n=360 Tax=Bacteria RepID=HIS6_XANOM Length = 258 Score = 237 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 163/256 (63%), Positives = 197/256 (76%), Gaps = 1/256 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML++RIIPCLDVR+G+VVKGV+F +H +GDIV LA RY +GADELVFYDI AS +GR Sbjct: 1 MLSRRIIPCLDVRNGRVVKGVKFHDHIDMGDIVELALRYRAQGADELVFYDIGASPEGRS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 VD +WV RVA +IDIPFCVAGGI +E A +L GADKISINSPAL P LI+ LAD F Sbjct: 61 VDYTWVERVARLIDIPFCVAGGIGDVETARAVLHAGADKISINSPALGRPQLISELADAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 GVQC+VVGID+ + + G++ V +YTGD S+T+ TLDWV E Q+ GAGEIVLN M+ Sbjct: 121 GVQCVVVGIDSIRE-DDGQWRVRRYTGDPSKTQALPMRTLDWVAEAQRLGAGEIVLNCMD 179 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGVR GYD+ QL++VR +CHVPLIASGGAG M+HF + F ADVDGALAASVFH I Sbjct: 180 NDGVRRGYDIAQLRQVRALCHVPLIASGGAGEMQHFADVFDQADVDGALAASVFHSGAIP 239 Query: 241 IGELKAYLATQGVEIR 256 I ELK +L Q +E+R Sbjct: 240 IPELKQFLRAQQIEVR 255 >UniRef50_B8D115 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halothermothrix orenii H 168 RepID=HIS4_HALOH Length = 237 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 14/247 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++DG V+ + V +A + + GA L D+ + G Sbjct: 1 MEVIPAVDIKDGSCVRLKKGDFNKRRVYSTSPVDVALYWEKHGASRLHIVDLDGAKSGWP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +A ++IP V GGI+SL+ K L G D+I + + AL +P L+ R D F Sbjct: 61 THLKTIREIALRVNIPLQVGGGIRSLKVIKKYLDSGVDRIILGTVALKNPELVKRALDNF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IVVG+D E + +Q D + E+++ G + +N Sbjct: 121 GSNRIVVGVDAR----------GGKVATEGWLKTSQVTVEDIISEMEEVGVKTFIYTDIN 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G D+E +K+V + +IASGG + + + + + A+ ++ + Sbjct: 171 RDGMLKGPDIEGIKRVLKSTKARIIASGGISSRQDLIN-LKAIGIKAAIVGKALYEGNLP 229 Query: 241 IGELKAY 247 + L Y Sbjct: 230 LEVLNQY 236 >UniRef50_P74106 Imidazole glycerol phosphate synthase subunit hisF n=67 Tax=Bacteria RepID=HIS6_SYNY3 Length = 261 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 114/255 (44%), Positives = 152/255 (59%), Gaps = 2/255 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 LAKRI+PCLDV G+VVKG+ F + + GD V LA+ Y E GADELVF DITA+ + R Sbjct: 3 LAKRILPCLDVNAGRVVKGINFVDLQDAGDPVELARAYNEAGADELVFLDITATHEQRDT 62 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V R AE + IP V GGI +LE +L GADK+S+NS A+ DP I+R +DRFG Sbjct: 63 IIDVVYRTAEEVFIPLTVGGGISTLEHIKNLLRAGADKVSVNSSAVRDPDFISRASDRFG 122 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QCIVV ID + + Y T + + W +EV KRGAGE+++ M+ Sbjct: 123 RQCIVVAIDARRRLDADNPGWDVYV--RGGRENTGLDAIAWAEEVAKRGAGELLVTSMDG 180 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG + GYDL + E +P+IASGGAG +H EAF + + AL AS+ H + I Sbjct: 181 DGTQAGYDLALTAAIAERVEIPVIASGGAGNCQHVYEAFTEGKAEAALLASLLHYGQLTI 240 Query: 242 GELKAYLATQGVEIR 256 GELK +L + + +R Sbjct: 241 GELKTFLEARQIPVR 255 >UniRef50_C9RKR3 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKR3_FIBSS Length = 263 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 103/256 (40%), Positives = 152/256 (59%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+I CLDVR+ +V KGV+F+ + IGD V + RY++EG DELVFYDITAS++ R Sbjct: 1 MLTKRLIVCLDVRNRKVTKGVKFKGNIDIGDPVEMGARYSDEGVDELVFYDITASAENRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + ++A+ + IPF V GGI++L+D + L GA+K+S+NS A+ P +I A F Sbjct: 61 CDMEMIRQIAKRVFIPFAVGGGIRNLDDMHEALLAGAEKVSVNSLAVLHPEIIAEGAKAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIV+G+D + + K + + L W + ++ G GEI LN ++ Sbjct: 121 GRQCIVLGMDAKFVGVSDKIPSGYEVFIRGGRQAMGIDALQWAKRAEELGVGEICLNSID 180 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGV+NGY+L + + VP+IASGGAGT H ++ FR D AL AS+ H Sbjct: 181 TDGVKNGYELTITDMIAKAVQVPVIASGGAGTPAHIVDLFRKTSADAALVASMVHFGDYT 240 Query: 241 IGELKAYLATQGVEIR 256 + +K + G+ +R Sbjct: 241 VPGIKGEMLAAGIPVR 256 >UniRef50_A8M910 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M910_CALMQ Length = 254 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 112/256 (43%), Positives = 154/256 (60%), Gaps = 8/256 (3%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L +RIIPC+DV VVKGV F ++GD V LA RY EEGADEL DITA+ GR Sbjct: 7 LVRRIIPCMDVDADIVVKGVNFEGLRVMGDPVELASRYEEEGADELFLLDITATVQGRST 66 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V VA + IP V GGI+ +EDA GADK+SIN+ A+ DP+++ +L+ +G Sbjct: 67 FLETVRNVAAAVSIPLGVGGGIRGMEDADAAFKAGADKVSINTAAVKDPSIVAKLSREYG 126 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 Q +VV IDT + + R T +DW + V++ GAGE+++ ++ Sbjct: 127 SQSVVVAIDTRRINNEWRVFIMG------GRRETLLNAVDWARTVEELGAGELLVTSIDA 180 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG R GYD+E +++ + ++P+IASGGAG HFLE + D ALAASVFH +INI Sbjct: 181 DGTRAGYDIELYRRLADAVNIPVIASGGAGEPSHFLEVLKY--ADAALAASVFHMGVINI 238 Query: 242 GELKAYLATQGVEIRI 257 LKAYL+ G+ +RI Sbjct: 239 SILKAYLSELGIRVRI 254 >UniRef50_C4ZLR4 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Thauera sp. MZ1T RepID=C4ZLR4_THASP Length = 226 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 95/257 (36%), Positives = 139/257 (54%), Gaps = 31/257 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV+ G+VVKGV F GD V +A+RY E+ Sbjct: 1 MLAKRIIPCLDVKSGRVVKGVNFVELRDAGDPVEIARRYDEQ------------------ 42 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 VAE + IP V GG++ +ED ++L+ GADK+S+N+ A+ +P L+ A + Sbjct: 43 --------VAEQVFIPLTVGGGVRVVEDVRRLLNAGADKVSMNTAAVNNPQLVFEAASKV 94 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIVV ID A T + ++W ++V+ GAGEI+L M+ Sbjct: 95 GSQCIVVAIDAKQTAPGKW-----EVFTHGGRNNTGLDAIEWARKVESLGAGEILLTSMD 149 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG ++G+DL + V + +P+IASGG GT+EH E + D LAAS+FH Sbjct: 150 RDGTKSGFDLALTRAVSDAVRIPVIASGGVGTLEHLAEGVSEGRADAVLAASIFHFGQHT 209 Query: 241 IGELKAYLATQGVEIRI 257 + E K + +G+E+R+ Sbjct: 210 VREAKELMRARGIEVRL 226 >UniRef50_Q2SCV5 Imidazoleglycerol-phosphate synthase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCV5_HAHCH Length = 255 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 94/260 (36%), Positives = 149/260 (57%), Gaps = 8/260 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KRIIP L + G++VKG QF GD V A+ Y + ADELVF D+ A+ G Sbjct: 1 MLKKRIIPMLLLSQGRMVKGKQFSAFRDTGDPVSAARIYNAQFADELVFLDVDANRQGSD 60 Query: 61 --VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + +V+ +P V GG+ S+E +++ GADK+ I + AL +P LI + Sbjct: 61 FEQLLNLIDKVSSECFMPLSVGGGVNSVEQVRRLVQSGADKVVITTAALENPGLINDASA 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 FG QCIVVG+D E G Y + + G T+ E ++++++ +RGAGE ++N Sbjct: 121 IFGRQCIVVGLDVKR--EDGAYRLYSHCG----RHKTERELEEFIRDMTQRGAGEFIVNA 174 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +++DG+ GYDLE +K + V P++A+GGAGT H AF++A+ D + AS+FH Sbjct: 175 VDRDGMMQGYDLEMIKCAKAVTDRPVLAAGGAGTFAHLTAAFQEANADAVVCASIFHFGD 234 Query: 239 INIGELKAYLATQGVEIRIC 258 N +++L G+ +++ Sbjct: 235 NNPIRARSHLLNAGIPMKLI 254 >UniRef50_Q1PWX6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWX6_9BACT Length = 243 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 62/250 (24%), Positives = 117/250 (46%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++ G+ V+ Q + E D V +AK + ++GA L D+ + DG Sbjct: 1 MIIFPAIDLKGGKCVRLTQGKKDEETVFSDDPVDMAKSWEDQGAQYLHVVDLDGAFDGLP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + S V ++ I+IP GG+++ E +L G +++ I + AL P+ + L F Sbjct: 61 KNLSIVEQIVNNINIPIEFGGGLRTTESVKSVLDLGVERVIIGTKALDSPSWVEELCSLF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V DA+ GK V+ + T +++ +D+ +E++K I+ ++ Sbjct: 121 PGRVAVG-----IDAKNGKVAVHGW------TSLSEKTAIDFAREMEKFSPCAIIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++E LK++ P+IASGG +++ E V+G + + I Sbjct: 170 KDGMLQGPNIESLKELLSSIKTPVIASGGISSLKDI-EYICQLPVEGMIVGKALYTGHIK 228 Query: 241 IGELKAYLAT 250 E K + Sbjct: 229 FSEAKQLCDS 238 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 2/116 (1%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 +D ++G+V V + A+ + ++F DI+ + + + + Sbjct: 128 IDAKNGKV--AVHGWTSLSEKTAIDFAREMEKFSPCAIIFTDISKDGMLQGPNIESLKEL 185 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 I P +GGI SL+D I + + + + C+ Sbjct: 186 LSSIKTPVIASGGISSLKDIEYICQLPVEGMIVGKALYTGHIKFSEAKQLCDSICL 241 >UniRef50_C7RAI6 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAI6_KANKD Length = 265 Score = 232 bits (593), Expect = 7e-60, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 154/257 (59%), Gaps = 2/257 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L R+I CLDV G+VVKGV F+ + +GD V LA RY E+GADE++F DI A+ + R Sbjct: 5 LKSRVIVCLDVAHGRVVKGVNFKGLQDMGDPVELAIRYQEQGADEIIFLDIKATLEQRAN 64 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V+RVAE + IPF V GG+ + D A+ L+ GADK+++NS A+ P L+ +A FG Sbjct: 65 ALEVVTRVAENLSIPFTVGGGLNTYADVAQFLNAGADKVALNSAAVKHPDLVDEIAKGFG 124 Query: 122 VQCIVVGIDTWYDAETGKYHVNQY-TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 QC+VV +D + + ++Y +T + W+ E+++RGAGEI+L M+ Sbjct: 125 SQCVVVAVDLNQEQDQKTQGSSEYEVYINGGHTLTDLNAMQWLTEIEQRGAGEILLTAMH 184 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G+D E + +V + + +IASGGA HF + F A D ALAA +FH+ Sbjct: 185 RDGTGFGFDNELMSQVSKKLGIQVIASGGASKPAHFTDTF-LAGSDAALAAGMFHRGEFT 243 Query: 241 IGELKAYLATQGVEIRI 257 +G++K L GV +RI Sbjct: 244 VGQVKQELLNNGVAVRI 260 >UniRef50_Q3ZYM9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=15 Tax=root RepID=HIS4_DEHSC Length = 244 Score = 232 bits (592), Expect = 9e-60, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 15/250 (6%) Query: 3 AKRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 IIP +D+ G+ V+ Q D V A R+ GA L D+ ++DG+ Sbjct: 7 KIEIIPAIDILGGRCVRLFQGDYAQETVYSSDPVGTAMRWQSLGAPRLHVVDLDGAADGQ 66 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V+ + +A IP V GGI+S+E K+L G D++ + + A+ +P L+ + R Sbjct: 67 SVNFELIKEIANSALIPVEVGGGIRSMETVKKLLVAGVDRVILGTAAVENPELVKEICAR 126 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 + V DA GK + T+ + L+ + ++K G + + Sbjct: 127 YADSVAV-----SIDARNGKVATRGWV------TNTEIDALELARSMKKLGIRRFIYTDI 175 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG + + ++ + +VP+IASGG ++ H +D +GA+ + + Sbjct: 176 SRDGTLSEPNFAAIRDLISAINVPVIASGGVSSLSHL-RLLKDIGAEGAIVGKAIYTGDL 234 Query: 240 NIGELKAYLA 249 N+ L+ Sbjct: 235 NLKRAFEDLS 244 >UniRef50_B5YIB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_THEYD Length = 244 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 14/253 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IIP +D++DG+ V+ Q + E + A R+ EGA+ L D+ + +G++ Sbjct: 1 MQIIPAIDLKDGKCVRLRQGKFSEVTVYYDNPEDAALRWQNEGAEVLHVVDLDGAKEGKI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ E V GGI+ +ED +LS G D++ + + A+ P + + RF Sbjct: 61 GNLPSIKKIREAFRGNIEVGGGIRRIEDIELLLSVGIDRVIVGTIAVQSPDFVKEVCKRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + IV DA+ G V + VT+ ++ ++Q G I+ ++ Sbjct: 121 PKKIIVG-----IDAKDGLVAVKGWV------EVTEIRAIELALKMQDYGIWGIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++E K + E VP+IASGG ++E + + G + + I+ Sbjct: 170 RDGMLTGPNIEATKALVESVKVPVIASGGVSSIEDIRKLAEIPQLWGVITGKAIYSGAID 229 Query: 241 IGELKAYLATQGV 253 + E + GV Sbjct: 230 LKEALRIIKGDGV 242 >UniRef50_A5INE6 Imidazole glycerol phosphate synthase subunit hisF n=7 Tax=cellular organisms RepID=HIS6_THEP1 Length = 254 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 129/257 (50%), Positives = 167/257 (64%), Gaps = 7/257 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRII CLDV+DG+VVKG F N GD V L K Y+E G DELVF DITAS + R Sbjct: 1 MLAKRIIACLDVKDGRVVKGTNFENLRDSGDPVELGKFYSEIGIDELVFLDITASVEKRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V +VAE IDIPF V GGI E A++++ GADK+SIN+ A+ DP+LIT++A F Sbjct: 61 TMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVEDPSLITKIARTF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +VV ID G++ V Y+G ++ T DWV EV++RGAGEI+L ++ Sbjct: 121 GSQAVVVAIDAKKV--DGEFVVFTYSGKKN----TGILLRDWVVEVERRGAGEILLTSID 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + GYD E ++ VR + +P+IASGGAG MEHFLEAF A SVFH + I+ Sbjct: 175 RDGTKAGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA-SVFHFREID 233 Query: 241 IGELKAYLATQGVEIRI 257 + ELK YL GV +R+ Sbjct: 234 VRELKEYLKKHGVNVRL 250 >UniRef50_C8PKX5 Imidazole glycerol phosphate synthase subunit hisF n=3 Tax=Bacteria RepID=C8PKX5_9PROT Length = 306 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 123/304 (40%), Positives = 162/304 (53%), Gaps = 51/304 (16%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 AKRIIPCLDV+DG+VVKGV F GD V +AKRY EEGADEL F DITAS GR Sbjct: 5 AKRIIPCLDVKDGRVVKGVNFVGLVDAGDPVEIAKRYNEEGADELCFLDITASHLGRDTI 64 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V RVA + IP V GGI++++D +++L+ G DKIS+NS A+ +P LI A++FG Sbjct: 65 VDVVERVARELFIPLTVGGGIRTIDDISRLLNVGCDKISLNSAAIKNPNLIDEAANKFGS 124 Query: 123 QCIVVGIDTWYDAE---------------------------------------------- 136 QC+V+ ID ++ Sbjct: 125 QCVVIAIDAKRNSIEISRGDLYGEARNSNGDLHGGMRNPDTNLGSEARNFGEILRGAQDE 184 Query: 137 ---TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL 193 T + L W +E Q+RGAGEI+L M+ DGV+NG++L Sbjct: 185 ILTGNGELCGYSVFINGGRLDTGRDALAWAKEAQERGAGEILLTSMDCDGVKNGFELNLT 244 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + + +P+IASGGAG MEHF +AF A D LAAS+FH + I I LKAYL QG+ Sbjct: 245 R-IFSALDIPVIASGGAGKMEHFKDAF-LAGADACLAASIFHFREIEIKALKAYLQEQGI 302 Query: 254 EIRI 257 E+R+ Sbjct: 303 EVRL 306 >UniRef50_C0Z6P5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Bacillales RepID=HIS4_BREBN Length = 249 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 103/255 (40%), Gaps = 16/255 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ + P +D+R G+ V+ Q + +AKR+ E+GA + D+ + +G Sbjct: 1 MSFIVYPAIDIRGGKCVRLFQGDYGQETVYADSPLAMAKRWVEQGASWVHLVDLDGAKEG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + + + +A I +P V GGI++ E A L G ++ + + A+ D R+ Sbjct: 61 KPANAAIIKEIARSIPVPVQVGGGIRTEEQIADYLEAGVARVIVGTAAIEDEPFTKRILQ 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 G + I +G+D N T + + + + GA + Sbjct: 121 NDGDK-IAIGLDCR----------NGLVATRGWLTTTDVQATELAKRLVTYGAETFIYTD 169 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHK 236 + +DG G ++E++ + +IASGG ++ L A V GA+ + Sbjct: 170 IARDGTMTGPNVEEIAALAMATGKSVIASGGVSQLDDLLTLATHASDGVSGAIVGKALYT 229 Query: 237 QIINIGELKAYLATQ 251 + E + + Sbjct: 230 DAFTLEEALQRMEGR 244 >UniRef50_Q12WC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=18 Tax=Euryarchaeota RepID=HIS4_METBU Length = 246 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 127/257 (49%), Gaps = 17/257 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQF---RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ +IP +D++ G+ V+ VQ + D V +A + +GA L D+ + +G Sbjct: 1 MSFEVIPAVDMKGGKCVQLVQGVPGSEMISLDDPVEVALDWVSQGARTLHLIDLDGAIEG 60 Query: 59 RVVDKSWVSRVAEVI---DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + + ++ E I V GGI+S EDAA +L G DK+ +++ AL DP LI + Sbjct: 61 NRTNAPIIKKIVEKCKPQGIYIQVGGGIRSFEDAATLLDIGIDKVILSTAALKDPELIKK 120 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 L+D FG + I V +D+ N E T+ ++ ++ + +++GAG I+ Sbjct: 121 LSDEFGSEHINVALDSK----------NGKISIEGWTKESEHTAVEMGSQFEEKGAGSIL 170 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++ +G+ NG + + +++ +P+IASGG T+E + ++ G + S + Sbjct: 171 FTNIDSEGLLNGVNPKPTEELVNAVTIPVIASGGVTTLEDIV-TLKNTGAAGVVVGSALY 229 Query: 236 KQIINIGELKAYLATQG 252 K+ + E ++ + Sbjct: 230 KKRFTLTEAINIISDKN 246 Score = 49.9 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 50/136 (36%), Gaps = 5/136 (3%) Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + + D + GK V G ++ + ++ + +GA + L ++ Sbjct: 1 MSFEVIPAVDMKGGK-CVQLVQGVPGSEMISLDDPVEVALDWVSQGARTLHLIDLDGAIE 59 Query: 185 RNGYDLEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 N + +KK+ E C + + GG + E D +D + ++ K I Sbjct: 60 GNRTNAPIIKKIVEKCKPQGIYIQVGGGIRSFEDAATLL-DIGIDKVILSTAALKDPELI 118 Query: 242 GELKAYLATQGVEIRI 257 +L ++ + + + Sbjct: 119 KKLSDEFGSEHINVAL 134 >UniRef50_A2BQT3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=10 Tax=Cyanobacteria RepID=HIS4_PROMS Length = 255 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 116/253 (45%), Gaps = 16/253 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +G+ V+ + + + A+ + EGA + D+ A+ G Sbjct: 1 MDLIPAIDLMNGKCVRLFKGDFNKRKDFAKEPHEQAEFWEREGAKYIHIVDLDAAKTGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++A+ ++IP + GGI+S E ++ S+G +K+ + + A+ + L+ L+++F Sbjct: 61 TNDKSIKKIAKTVNIPIQIGGGIRSQERIEQLFSYGVEKVIMGTSAIENKELVKDLSNKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + IV DA+ GK + + D V+E ++ +N Sbjct: 121 PGRIIVG-----IDAKDGKVSTRGWL------EQSNIFATDLVKEFSSFKIASFIVTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 DG G + E +K + E+ +P+IASGG G++ L F ++ + G + ++ Sbjct: 170 TDGTLEGTNEEFIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENK 229 Query: 239 INIGELKAYLATQ 251 I E L+ + Sbjct: 230 FTINEANNVLSAE 242 >UniRef50_B1I557 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Bacteria RepID=HIS4_DESAP Length = 262 Score = 230 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 16/257 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+R G+ V+ Q R D V +A+ + E+GA L D+ + G+ Sbjct: 1 MLIIPAVDLRGGRCVRLFQGRADQETVYSTDPVAVARTWEEQGARRLHVVDLDGAFTGKP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V + + ++IP V GGI++ E+ L G D++ + + AL +P + + + Sbjct: 61 QNSGVVLDIVKSVNIPVQVGGGIRNPENVKCYLEHGVDRVILGTAALTNPEFLDAVVAAY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IVVG+D + + + + L +++E+ +RG +V + Sbjct: 121 G-ERIVVGVDCR----------DGRVCVQGWEQTAATDVLPFLEELVRRGVRRVVFTDVK 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL--EAFRDADVDGALAASVFHKQI 238 +DG G +LE++ +V + +IASGG +E + VD + + Sbjct: 170 RDGTLEGPNLEEIARVAAHTELKVIASGGVSRLEDLRALKKLEHLGVDSVIIGKALYAGT 229 Query: 239 INIGELKAYLATQGVEI 255 I + E A + + Sbjct: 230 ITLAEALALERKEKDNV 246 >UniRef50_B4S4Z8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Chlorobiaceae RepID=HIS4_PROA2 Length = 261 Score = 230 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 105/246 (42%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D++DG+ V+ + + + + +A + ++ A L D+ A+ G + Sbjct: 1 MLIIPAIDIKDGKCVRLTRGDFDQQKIYLDNPRDMAIIWRKQNAKMLHVVDLDAALTGTM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + +DIP V GGI+S ED + L G ++ I S A+ +P LI L F Sbjct: 61 VNFEKIREIVATLDIPVQVGGGIRSFEDVERYLGIGVSRVVIGSAAVTNPQLIAELLATF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 IVVGID N + T + + + E++K G I+ ++ Sbjct: 121 SPSQIVVGIDAE----------NGIPKIKGWTESSSMQDYELALEMKKLGVKRIIYTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG+ G E ++ + + ASGG + + + VD + ++ Sbjct: 171 RDGMMQGVGYESTRRFAMKAGMRVTASGGVTSSDDLKKLQTLEQYGVDSVIVGKALYESN 230 Query: 239 INIGEL 244 +L Sbjct: 231 FPCQQL 236 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 45/129 (34%), Gaps = 2/129 (1%) Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + I D + GK V GD + ++ D +K+ A + + ++ Sbjct: 1 MLIIPAIDIKDGK-CVRLTRGDFDQQKIYLDNPRDMAIIWRKQNAKMLHVVDLDAALTGT 59 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E+++++ +P+ GG + E V + S I EL A Sbjct: 60 MVNFEKIREIVATLDIPVQVGGGIRSFEDVERYLG-IGVSRVVIGSAAVTNPQLIAELLA 118 Query: 247 YLATQGVEI 255 + + + Sbjct: 119 TFSPSQIVV 127 >UniRef50_B0TY42 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_FRAP2 Length = 241 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 102/247 (41%), Gaps = 11/247 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+ +G+ V+ + + +AK Y + GA+ + D+ + G+ Sbjct: 1 MNIFPAIDLINGKCVRLEKGDFNKTTTYELEPKDVAKAYQQAGAEFIHVVDLDGAKKGQT 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ E ++ V GG+K E K+L G D++ I S A+ D L + +++ Sbjct: 61 CQFETIQKIRENCNMTLQVGGGVKDFETIEKLLEIGVDRVVIGSLAVKDIALTKKFFEKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IV+ +D + Y + + +Q G ++ ++ Sbjct: 121 GAEKIVLALDVFIKNGVP------YIATHGWQESSTTTLDEILQTYLGDGLEYVLCTDIS 174 Query: 181 QDGVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG+ G + E + + V +ASGG G++E E ++ + G + ++ Sbjct: 175 RDGMLQGPNFELYRIYSSIYPDVQFMASGGVGSLEDL-EILKEQNTYGVIIGKALYENKF 233 Query: 240 NIGELKA 246 + E Sbjct: 234 TLQEALE 240 >UniRef50_C0QRW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Persephonella marina EX-H1 RepID=HIS4_PERMH Length = 241 Score = 227 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 110/248 (44%), Gaps = 16/248 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 L +IP +D++DG+ V+ + D V +AK++ E+GA L D+ + +G Sbjct: 3 LRSFVIPAVDIKDGKAVRLYKGDPEAVTVYGDDPVSVAKQWEEKGAKHLHIVDLDGAFEG 62 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + V + + + IP GG++S E I+ G +++ I S A + R+ Sbjct: 63 KPKNIDIVKDIVKTVSIPVEFGGGLRSFEAVKSIVETGVERVVIGSLAYQNRQEFERIVS 122 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + + IV DA+ GK + + T++ LD+ + + Sbjct: 123 AYPGKVIVG-----IDAKDGKVAIKGWL------EKTEYTPLDFARMFDDLDIWGFLYTD 171 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHK 236 +N+DG G ++E K + + P+IASGG G++E + + V G + ++ Sbjct: 172 VNRDGAMVGPNIEGTKYLAQNLKHPVIASGGVGSVEDLKKLYDLKKYGVYGVVVGKALYE 231 Query: 237 QIINIGEL 244 I + +L Sbjct: 232 GKIKLEQL 239 >UniRef50_Q02YX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=8 Tax=Bacteria RepID=HIS4_LACLS Length = 246 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 113/255 (44%), Gaps = 15/255 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+++G+ V+ + + + + +A+++ + GA L D+ + G+ Sbjct: 1 MEIIPAIDLQNGEAVRLYKGDYDKKTVYSKNPLEIAQKFEQMGAKYLHLVDLDGAKLGQT 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADR 119 + V ++ + ++ + GGI++L+ + L G +++ + + A P + L + Sbjct: 61 RNLEIVRKIKDQTNLKIEIGGGIRNLDTVSLYLEQIGVERVILGTAAAEKPDFLKELLVK 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 +G+ IVVG+D + T L ++++++K G +++ + Sbjct: 121 YGLSRIVVGVDIR----------EGFVSTSGWLEKTTLPYLSFLKDLEKIGVKTVIVTDI 170 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG G + E ++ + + +I SGG A D+D G + +++ I Sbjct: 171 SKDGTLTGPNFELYDEISKETSLDVIVSGGVKDSSDIQRA-ADSDFYGIIVGKAYYEGKI 229 Query: 240 NIGELKAYLATQGVE 254 N+ + + + Sbjct: 230 NLEKEFNHANKKNYP 244 >UniRef50_B3DY29 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DY29_METI4 Length = 248 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 114/247 (46%), Gaps = 13/247 (5%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 ++ +D+ GQVV+ Q + E D V A + +GAD L D+ + G Sbjct: 8 TMKMYAAIDLFKGQVVRLRQGKLEEMTVYGSDPVKTALFWQSQGADGLHIVDLEGAFSGT 67 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + ++A + IP GG++++E K L GA ++ I S + DP + L+++ Sbjct: 68 PRHLDLLEKIAYAVTIPIQFGGGLRTVEQVLKALEGGAQRVVIGSKLVTDPGFLQELSEK 127 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 G + IV +D N E + + + ++++ V+++GAG ++ + Sbjct: 128 IGPEKIVAALD----------TQNGEIQIEGWKKSSGYSLENFIKWVEQKGAGFLLYTNI 177 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG G D+ +KV E+ +P+ ASGG G + E + + GA+ ++ I Sbjct: 178 QTDGTLKGADVRGTQKVVEMSRLPVFASGGIGCTKDVEELLKLKGLYGAILGRSLYEGKI 237 Query: 240 NIGELKA 246 ++ E+K Sbjct: 238 SLSEIKK 244 >UniRef50_A1KJ21 Imidazole glycerol phosphate synthase subunit hisF n=76 Tax=Bacteria RepID=HIS6_MYCBP Length = 267 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 109/256 (42%), Positives = 146/256 (57%), Gaps = 2/256 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 LA R+IPCLDV DG+VVKGV F N GD V LA Y EGADEL F D+TASS GR Sbjct: 13 LAVRVIPCLDVDDGRVVKGVNFENLRDAGDPVELAAVYDAEGADELTFLDVTASSSGRAT 72 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V R AE + IP V GG++++ D +L GADK+++N+ A+A L+ +A +FG Sbjct: 73 MLEVVRRTAEQVFIPLTVGGGVRTVADVDSLLRAGADKVAVNTAAIACLDLLADMARQFG 132 Query: 122 VQCIVVGIDTWYDAETGKYHVNQY-TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 QCIV+ +D + + R T + + W G GEI+LN M+ Sbjct: 133 SQCIVLSVDARTVPVGSAPTPSGWEVTTHGGRRGTGMDAVQWAARGADLGVGEILLNSMD 192 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG + G+DL L+ VR VP+IASGGAG +EHF A A SVFH + + Sbjct: 193 ADGTKAGFDLALLRAVRAAVTVPVIASGGAGAVEHFAPAVAAGADAVLAA-SVFHFRELT 251 Query: 241 IGELKAYLATQGVEIR 256 IG++KA LA +G+ +R Sbjct: 252 IGQVKAALAAEGITVR 267 >UniRef50_Q0IDQ9 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IDQ9_SYNS3 Length = 255 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 94/256 (36%), Positives = 144/256 (56%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M RIIP LD++ G ++KGVQ +GD + AKRY+E GADEL+F D+ AS R Sbjct: 1 MRNLRIIPRLDIKSGTLIKGVQMEGWRKVGDPILAAKRYSEYGADELLFMDVVASLYERN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V +V + IP V GGI+ ++D +LS GADK+S+N+ AL P LI ++DR+ Sbjct: 61 TLHEIVEQVCSNVFIPVTVGGGIRKIKDVETLLSRGADKVSVNTGALLKPELINEISDRY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q V+ ++ E + ++ + E ++WV+E + RGAGEIVL ++ Sbjct: 121 GSQATVLTVECLKCGEKSWEAL-----TDNGRNRSGREVIEWVKEAENRGAGEIVLTSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 QDG G+D++ + V + ++P+IASGG G H +E + DV GA A H + ++ Sbjct: 176 QDGRGYGFDIDLVDIVSQAVNIPIIASGGFGKPSHIVELIKSTDVSGAAIAQALHWEKVS 235 Query: 241 IGELKAYLATQGVEIR 256 E++ L V +R Sbjct: 236 FSEIRDSLRDNNVFLR 251 >UniRef50_B2V6T1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Aquificales RepID=HIS4_SULSY Length = 239 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 115/248 (46%), Gaps = 16/248 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 L + IIP +D++ G+VV+ + + + + +AK + + GA+ + D+ + +G Sbjct: 3 LKEFIIPAIDIKGGKVVRLYKGEFDKVKVYNENPIDMAKYFEDAGAEHIHVVDLDGALEG 62 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + + ++IP GG++S E +L G +++ I S A +P ++ + Sbjct: 63 LPKNIKILESIVRSVNIPIEFGGGLRSFEAVKAVLDLGVERVVIGSLAYQNPEEFYKIVE 122 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 F + IV DA+ GK + + T T+ L++ ++ + Sbjct: 123 SFPNKVIVG-----IDAKDGKVAIKGW------TEKTEVSPLEFAKKYDDLDIFGFLFTD 171 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHK 236 +++DG G ++E ++ + P+IASGG G++E ++ + + G + ++ Sbjct: 172 VSRDGSMIGANVEATVELAKNLKHPVIASGGVGSLEDVIKLYEKREFGIFGVVVGKAIYE 231 Query: 237 QIINIGEL 244 I++ E+ Sbjct: 232 GKIDLKEI 239 Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 2/116 (1%) Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 D + GK V Y G+ + +V +D + + GA I + ++ ++ Sbjct: 9 PAIDIKGGKV-VRLYKGEFDKVKVYNENPIDMAKYFEDAGAEHIHVVDLDGALEGLPKNI 67 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + L+ + ++P+ GG + E ++A D V+ + S+ ++ ++ Sbjct: 68 KILESIVRSVNIPIEFGGGLRSFE-AVKAVLDLGVERVVIGSLAYQNPEEFYKIVE 122 >UniRef50_D2RTG3 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=6 Tax=Euryarchaeota RepID=D2RTG3_9EURY Length = 244 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 124/249 (49%), Gaps = 14/249 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN--HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++IP +D++DG+VV+ VQ + GD V A+R+ +EGA+ L D+ + +G+ Sbjct: 7 FQVIPAVDMQDGEVVQLVQGERGTEKTYGDPVDAARRWLDEGAEALHLVDLDGAFEGQRA 66 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + V E +D+P + GGI++ +DA +L G D++ + + A+ +P ++ +++R Sbjct: 67 NGDAIDEVLETVDVPTQLGGGIRTADDAVDLLERGVDRVILGTAAVENPDIVAEISERHP 126 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 +V DA+ G+ V + T +D + + GA I+ ++ Sbjct: 127 DSVVV-----SLDAKDGEVVVEGW------TEGAGISPVDAAERYAELGAAAILFTNVDV 175 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +G G E ++++ E VP+IASGG T+E A DA + S ++ + Sbjct: 176 EGKLEGVAAEPVRELVEATDVPVIASGGVATLEDV-RALEDAGAAAVVVGSALYEGKFTL 234 Query: 242 GELKAYLAT 250 E ++ + + Sbjct: 235 AEAQSAIDS 243 >UniRef50_Q2JK82 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=91 Tax=Bacteria RepID=HIS4_SYNJB Length = 261 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 14/246 (5%) Query: 5 RIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +IP +D+ G+ V+ Q ++ D + A+ +A +GA L D+ + G V Sbjct: 9 EVIPAIDLLQGRAVRLYQGDYAQAEQVADDPIQQAEAWAAQGAPRLHVVDLDGAKSGDPV 68 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + R+ + IP V GGI+SLE A ++L G D++ + + A+ DP + + F Sbjct: 69 NLPIIERIVRSLAIPVQVGGGIRSLERARQLLDLGVDRVIVGTLAVEDPDTLEAMTQAFP 128 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + VGID T + VQ VQ +GA I+ +++ Sbjct: 129 GR-VWVGIDARQ----------GQVATRGWLSTTPLRAPELVQRVQAQGAAGIIYTDISR 177 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG G +LEQL+++ V VP+IASGG G++ L + GA+ + I++ Sbjct: 178 DGTLAGPNLEQLRQILAVSQVPVIASGGIGSLTDLLALLSLPRLTGAILGKALYSGAISL 237 Query: 242 GELKAY 247 E Sbjct: 238 QEALRA 243 >UniRef50_Q1R079 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=31 Tax=cellular organisms RepID=HIS4_CHRSD Length = 249 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 17/254 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQF---RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++DGQ V+ Q + D V +A R+ E GA L D+ + +G+ Sbjct: 1 MLVIPAIDLKDGQCVRLKQGRMDDSTTYGDDPVAMAARWVETGARRLHLVDLNGAFEGKP 60 Query: 61 VDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V+ V+ +A D+P + GGI++ E L G + I + A+ +P + + R Sbjct: 61 VNAEAVTAIARAYPDLPIQIGGGIRTAETIEAYLEAGVSYVIIGTQAVKEPAFVGEMCRR 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 F ++VG+D + Y + V+ + +D + G IV + Sbjct: 121 FPGH-VIVGLDAR----------DGYVATDGWAEVSTLKAVDLAKRFADDGVSSIVYTDI 169 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR--DADVDGALAASVFHKQ 237 +DG+ G ++ ++ +P+IASGG + DA + GA+ ++ Sbjct: 170 ARDGMMQGVNIAATAELAREGGLPVIASGGVTHLGDIEALLEVADAGILGAITGRAIYEG 229 Query: 238 IINIGELKAYLATQ 251 +++ E + Q Sbjct: 230 KLDVAEAQRLCDAQ 243 >UniRef50_Q2LTH2 Imidazole glycerol phosphate synthase, cyclase subunit n=3 Tax=Bacteria RepID=Q2LTH2_SYNAS Length = 254 Score = 223 bits (570), Expect = 3e-57, Method: Composition-based stats. Identities = 99/257 (38%), Positives = 145/257 (56%), Gaps = 3/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M +I+PCLD+++G+VVKG+ F + GD V A Y EGADEL DI A+ + R Sbjct: 1 MKPIKIMPCLDMKEGRVVKGIHFVELKDAGDPVENAAFYQAEGADELAMLDIAATLENRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 WV++V+ V+ IP V GGI +LED +L GA KIS+NS A+ +P+L++ A +F Sbjct: 61 TRLEWVNKVSAVLTIPLTVGGGISTLEDIELVLQAGAAKISMNSAAVKNPSLVSEAAKKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I V ID + T + + W + Q+ GAG I+ M+ Sbjct: 121 GSEKITVAIDARR---NSQMPSGFELVVSGGTLPVARDAVAWARTCQELGAGVILPTSMD 177 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG R GYD+E K + + +P++ASGGAG +E F EA + LAASVFH + ++ Sbjct: 178 GDGTRAGYDIEYTKAIADAVDLPVVASGGAGKLEDFYEAVQKGGASILLAASVFHYRTLS 237 Query: 241 IGELKAYLATQGVEIRI 257 I +K YLA +G+ + I Sbjct: 238 IRAVKQYLADRGLPVII 254 >UniRef50_Q18C71 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Firmicutes RepID=HIS4_CLOD6 Length = 240 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 115/248 (46%), Gaps = 15/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++D + V+ Q + + + +A ++ EGA+ + D+ + Sbjct: 1 MIIFPAIDIKDNKCVRLTQGEFDKVNVYYDNPLEVAYKWKNEGAEYIHIVDLNGARSEFG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + +A IDIP V GG++ E +++ G ++ + S A+ + L+ L + + Sbjct: 61 VNTKIIEDIANNIDIPIQVGGGVRDKEKVKSLINAGVTRVILGSIAIENLNLVEELVNEY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + +V DA+ GK V + V+ ++L ++++K G IV ++ Sbjct: 121 KEKIVV-----SIDAKDGKVAVRGW------EVVSNVDSLTLCKQLEKIGVQTIVYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G + + +++ + + +IASGG ++E + ++ GA+ + + I+ Sbjct: 170 KDGMLQGPNFDIYERIAKETSLNVIASGGVTSIEDVKR-LKAMNLYGAIIGKALYDKKID 228 Query: 241 IGELKAYL 248 E + Sbjct: 229 FKEAQQLC 236 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 2/114 (1%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 ++I+ +D +DG+V V+ D + L K+ + G +V+ DI+ + + Sbjct: 121 KEKIVVSIDAKDGKV--AVRGWEVVSNVDSLTLCKQLEKIGVQTIVYTDISKDGMLQGPN 178 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 R+A+ + +GG+ S+ED ++ + I Sbjct: 179 FDIYERIAKETSLNVIASGGVTSIEDVKRLKAMNLYGAIIGKALYDKKIDFKEA 232 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 36/94 (38%), Gaps = 1/94 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 L+ + + GA I + +N G + + ++ + +P+ GG E Sbjct: 31 NPLEVAYKWKNEGAEYIHIVDLNGARSEFGVNTKIIEDIANNIDIPIQVGGGVRDKEKV- 89 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 ++ +A V + S+ + + + EL + Sbjct: 90 KSLINAGVTRVILGSIAIENLNLVEELVNEYKEK 123 >UniRef50_C6UMW6 Putative imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UMW6_HODCD Length = 264 Score = 223 bits (569), Expect = 5e-57, Method: Composition-based stats. Identities = 102/255 (40%), Positives = 150/255 (58%), Gaps = 6/255 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 LA RIIPC+DV++G VVKG +F +G+ +A Y+ GADEL F D++ASS R + Sbjct: 5 LALRIIPCMDVKEGHVVKGSKFCGLVRVGEATLVANSYSVSGADELCFLDVSASSANRSI 64 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + +S+VAE IP V GG++ ++D +L GADK+SINS + P I R D+FG Sbjct: 65 LYATISQVAESCLIPLTVGGGVRRVKDVGDLLRAGADKVSINSAGVLSPEFIARCVDKFG 124 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QC+VV ID A G + V + R T + L++ + + GAGEI+L +++ Sbjct: 125 SQCVVVSIDCK--ASDGAWEVCTH----GGARPTGVDALEYACQAAQFGAGEILLTSVDR 178 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DGV+ GYDL LK V + VP+IASGG G + HF A + L AS+ H+ + + Sbjct: 179 DGVKAGYDLALLKAVSSLVSVPVIASGGGGELSHFALALIEGGASAVLTASLLHRNELTV 238 Query: 242 GELKAYLATQGVEIR 256 +LK +L + G+ +R Sbjct: 239 SQLKFFLGSCGIVVR 253 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 5/106 (4%) Query: 31 DIVPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 D + A + A+ GA E++ D G D + + V+ ++ +P +GG L Sbjct: 155 DALEYACQAAQFGAGEILLTSVDRDGVKAG--YDLALLKAVSSLVSVPVIASGGGGELSH 212 Query: 89 -AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 A ++ GA + S + +++L G IVV D Sbjct: 213 FALALIEGGASAVLTASLLHRNELTVSQLKFFLGSCGIVVRDDYVR 258 >UniRef50_C5BV99 Imidazole glycerol phosphate synthase subunit hisF n=14 Tax=Bacteria RepID=HIS6_BEUC1 Length = 256 Score = 223 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 103/254 (40%), Positives = 148/254 (58%), Gaps = 1/254 (0%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 A R++PCLDV G+VVKGV F + GD V LA+RY +GADE+ F D++AS+ GR Sbjct: 4 ALRVVPCLDVDGGRVVKGVNFLDLRDAGDPVELARRYDADGADEITFLDVSASTQGRATT 63 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 VS AE + +P V GG++++ D +L GADK+ +N+ A+A P L+T +A +G Sbjct: 64 LEMVSATAEQVFVPLTVGGGVRAVADVEALLRAGADKVGVNTAAIARPELLTEIAQHYGN 123 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 Q +V+ +D + T + ++W E RGAGE++LN ++ D Sbjct: 124 QVLVLSVDARRCPDGVVTDSGFEVTTHGGRTGTGIDAVEWAAEATSRGAGEVLLNSIDAD 183 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G G+D+E ++ VR V PL+ASGGAGT+E F+ A R D LAASVFH + I Sbjct: 184 GTTAGFDVEMIEAVRAVVDTPLVASGGAGTVEDFVAAARAG-ADAVLAASVFHYGTLTIS 242 Query: 243 ELKAYLATQGVEIR 256 E+KA L G E+R Sbjct: 243 EVKAALRDAGFEVR 256 >UniRef50_P62353 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Desulfovibrio RepID=HIS4_DESVH Length = 249 Score = 222 bits (567), Expect = 7e-57, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 110/254 (43%), Gaps = 17/254 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQF---RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+ +G V+ + D V A+ + E+G L D+ + G+ Sbjct: 1 MIVFPAIDLMNGVCVRLRRGRADDETVFSSDPVATARHWQEQGGRWLHVVDLDGAFSGQP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + + +DIP + GGI+ A L G +++ I + AL +P L F Sbjct: 61 VNAPLIRSICDALDIPVQLGGGIRDAATAKAYLEAGVERLIIGTIALEEPDAYAALCAEF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V DAE GK + D + + + + + G I+ ++ Sbjct: 121 PGRIGV-----SLDAEGGKLKTKGWVAD------SGLTVDEVLPRLLEAGTAFIIYTDID 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF---RDADVDGALAASVFHKQ 237 +DG++ G +L L+ + + VP+IA+GG T+E + R ++ GA++ ++ Sbjct: 170 RDGMQTGVNLPALEHLAKASTVPVIAAGGVATLEDVKALYPLSRTTNLQGAVSGRAIYEG 229 Query: 238 IINIGELKAYLATQ 251 +++ ++ Q Sbjct: 230 TLDLRTAMDWIRQQ 243 >UniRef50_A3CNT1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Bacilli RepID=HIS4_STRSV Length = 242 Score = 222 bits (567), Expect = 7e-57, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 113/250 (45%), Gaps = 15/250 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ +I+P +D++DGQ V+ + + D++ A+ + E G + D+ + +G Sbjct: 1 MSMKILPAIDIKDGQAVRLFKGDFSQKTVVNPDVLEQARVFKEAGVTMIHVVDLEGALEG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R ++ ++++ + V GGI+SLE L+ G D++ I S A+ +P + + Sbjct: 61 RAANRDLIAQIKAETGLAIQVGGGIRSLEQIEDYLAVGIDRVIIGSMAVKNPEFVEAALE 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 RFG IV+GID E + + + ++K G V Sbjct: 121 RFGSGKIVIGIDAK----------EGLVATEGWLETSNQDYISLALAMEKIGVRLFVYTD 170 Query: 179 MNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +++DG G +++ +K+ +IASGG + + E + + GA+ ++ Sbjct: 171 VDRDGTLTGPNIQHYQKLLASLKHAQVIASGGIQSADDLEEM-KKLGLAGAIVGKAYYSG 229 Query: 238 IINIGELKAY 247 I++ ++K Sbjct: 230 RISLEQIKEA 239 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 48/131 (36%), Gaps = 2/131 (1%) Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + + I D + G+ V + GD S+ V + L+ + ++ G I + + Sbjct: 1 MSMKILPAIDIKDGQ-AVRLFKGDFSQKTVVNPDVLEQARVFKEAGVTMIHVVDLEGALE 59 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + + + +++ + + GG ++E + +D + S+ K + Sbjct: 60 GRAANRDLIAQIKAETGLAIQVGGGIRSLEQIEDYL-AVGIDRVIIGSMAVKNPEFVEAA 118 Query: 245 KAYLATQGVEI 255 + + I Sbjct: 119 LERFGSGKIVI 129 >UniRef50_B8FP23 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_DESHD Length = 250 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 123/257 (47%), Gaps = 18/257 (7%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + R+ P +D+++G+ V+ +Q R V +A+++ E+GAD L D+ + G Sbjct: 1 MRMRLFPAIDLKEGKAVRLLQGRMEDATVYGEQPVEVARKFKEQGADSLHVVDLDGAFAG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + V+ + + ++ + + V GGI++LE ++L G +++ + + A+ +P L+ + Sbjct: 61 KPVNDAVILKLIQSSGLRVQVGGGIRTLERIEELLKLGVERVILGTVAVRNPELVEKAVQ 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 RF + +V+GID + + T+ + LD ++K G +V Sbjct: 121 RF-EEAVVIGIDAK----------DGLVAVQGWAEKTEIKALDLALRMKKVGVKHLVFTD 169 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD----VDGALAASVF 234 +++DG+ G +++ ++ + + ++ASGG +E +A+ ++GA+ Sbjct: 170 ISRDGMLQGPNIQSTVELARLSGLQVVASGGVSRLEDLRLLQEEANRGVSLEGAIVGKAL 229 Query: 235 HKQIINIGELKAYLATQ 251 + ++ E + + Sbjct: 230 YAGAFSLAEALRVVGQR 246 >UniRef50_D1CF74 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CF74_THET1 Length = 243 Score = 222 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 15/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +GQ+V+ Q D V +A+++ GA L D+ + G Sbjct: 1 MIVIPAIDILEGQLVRLTQGDYSRKKVYSYDPVVVARKWKAIGAQWLHVVDLDGARQGHP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + V V GG+++LED I+ GA +I + + A+ DP + + ++ Sbjct: 61 VNVDVIKSVIMEFGPQVQVGGGLRTLEDIQSIVELGASRIVLGTSAVKDPEFLREVCAKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 +V +DT N + T+ + + L+ + V+ G G I+ + Sbjct: 121 P-DMVVAALDTR----------NGVVAIDGWTKSSGLDVLEVAKLVEDAGVGYILFTAIE 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG G D+ ++++ VP+IASGG E E A V + ++ + Sbjct: 170 TDGTMTGPDIAAVQRLMSHVSVPVIASGGISEPEDLEE-LSKAGVYAVIVGKALYEGRLP 228 Query: 241 IGELKAY 247 + Y Sbjct: 229 EEVITTY 235 >UniRef50_Q65EG2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=18 Tax=Bacillales RepID=HIS4_BACLD Length = 245 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 111/256 (43%), Gaps = 16/256 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M + P +D+R+G+ V+ +Q + + +A R+AEEGA + D+ + + Sbjct: 1 MSEFTVYPAIDIRNGKCVRLIQGDYEKETIYGHSPLEMASRFAEEGASWIHLVDLDGARE 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G+ V+ V +A+ +D+ V GGI++ +D LS G +++ + S A+++ + ++ Sbjct: 61 GKKVNGGHVISIADKLDVKVQVGGGIRTEKDVYDYLSQGVERVILGSSAVSNTEFVKKML 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 +G I +G+D + + E + + +E+ GA + Sbjct: 121 KAYGGH-IAIGLDAR----------DGFVSTEGWLETSSVRAEELGRELANEGAEVFIFT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFH 235 + DG+ +G ++ ++ +IASGG ++ A V GA+ + Sbjct: 170 DIATDGMLSGPNINSTVELARATGKQVIASGGVSSLADLEALASRASEGVSGAIVGKALY 229 Query: 236 KQIINIGELKAYLATQ 251 + E +A + Sbjct: 230 TNQFTVAEALERVAAK 245 >UniRef50_Q8DMA5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=23 Tax=Bacteria RepID=HIS4_THEEB Length = 257 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 109/252 (43%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ DG+ V+ VQ ++ D + +A + GA L D+ A+ G Sbjct: 1 MDVIPAIDLLDGKCVRLVQGNYDKVNVFHDDPLKVALYWQRLGAPRLHLVDLDAAKTGEP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ ++IP V GG++S + A + G ++ + + AL +P L+ LA + Sbjct: 61 RNYDLIGKIVASLEIPVQVGGGLRSRQAVADLFLQGVNRAILGTVALENPKLVASLAAEY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I VG+D + Y ++ D Q + G V + Sbjct: 121 PGR-IWVGLDAR----------DGYVATRGWLETSKILATDLAQNMAAMGVAGFVYTDIQ 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHKQI 238 +DG G ++ L+++ V + P+IASGG ++ L F + GA+ + + Sbjct: 170 RDGTLQGPNIPALRQLLAVTNRPVIASGGVSSLNDILSLFALTPHGLVGAIVGKALYTKA 229 Query: 239 INIGELKAYLAT 250 +++ E + Sbjct: 230 MDLREAVRAVGQ 241 >UniRef50_Q4FNT6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=root RepID=HIS4_PELUB Length = 239 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 109/250 (43%), Gaps = 14/250 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D++D + V+ ++ E V A +Y + G L D+ + G Sbjct: 1 MKIFPAIDIKDKKCVRLIKGDFNNKTEYEISPVDQAGKYKDHGFKNLHIVDLDGALTGET 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + D+ V GG++S++ K ++ G +K+ + S A+ + + +F Sbjct: 61 VNLDIIKEIVHKFDLKIEVGGGVRSIDSIEKYINAGVEKVILGSAAIKNKNFLKEACQKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I +G+D + Y + TLD+++EV GA ++ +N Sbjct: 121 PNK-IALGLDAK----------DGYLSVSGWKENSNQLTLDFLKEVNDYGASRLIYTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + + E+ V V + P+I SGG +++ +A +++G + + I Sbjct: 170 RDGTKESPNFEETTNVANVSNCPVIISGGVSSIDDIKKAKGLKNIEGIIVGKAIYDGDIK 229 Query: 241 IGELKAYLAT 250 + EL L Sbjct: 230 LEELVKELDA 239 >UniRef50_A2C5V2 Imidazoleglycerol-phosphate synthase n=2 Tax=Prochlorococcus marinus RepID=A2C5V2_PROM3 Length = 500 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 88/255 (34%), Positives = 140/255 (54%), Gaps = 5/255 (1%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L+KRII LDV+ +++KGV+F +IGD + +A++YA+ G DEL++ D AS GR Sbjct: 15 LSKRIIARLDVKGNKIIKGVRFEGLRVIGDPLDMARKYAKAGIDELLYIDAVASLYGRNS 74 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + + IP GGI++LEDA +LS GADKI+IN+ AL P LI+ L++ G Sbjct: 75 LIEVLKSTSSEVFIPITAGGGIRNLEDAKLLLSNGADKIAINTAALECPQLISELSNTLG 134 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QC+VV I + + + ES + + + W++ VQ GAGEI+L ++Q Sbjct: 135 SQCVVVSIQARASSSSSWDAMK-----ESGREKSGIDVIKWIENVQLLGAGEILLTSVDQ 189 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG D ++KV + +PLI SGG +A ++ + + H Q N+ Sbjct: 190 DGTCIKPDEILIQKVLPILKLPLIVSGGFSDPNQVYQALTNSRISAVAIGAALHYQKTNV 249 Query: 242 GELKAYLATQGVEIR 256 ++K+ L+ + IR Sbjct: 250 SDIKSMLSFNNIAIR 264 >UniRef50_A4G9I7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=209 Tax=Bacteria RepID=HIS4_HERAR Length = 265 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 114/262 (43%), Gaps = 26/262 (9%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++DG V+ Q + D +A+ + E+GA L D+ + G+ Sbjct: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSEDPADMARHWLEQGARRLHLVDLNGAFAGKP 60 Query: 61 VDKSWVSRVAEVI----------DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 ++ V + + + +IP + GGI+ L+ + L G I I + A+ +P Sbjct: 61 KNEPAVKAILQAVREYAEKNGIEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + F Q IV DA+ GK + + ++++ E +D ++ + G Sbjct: 121 GFLHDACSAFPGQIIVG-----LDAKDGKVATDGW------SKLSGHEVIDLAKKFEDYG 169 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE--AFRDADVDGA 228 I+ + +DG+ G ++E K+ + +P+IASGG ++ A ++ ++G Sbjct: 170 CESIIYTDIGRDGMMGGVNIEATVKLAQSMTIPVIASGGVHNIKDVEALCAVQEEGIEGV 229 Query: 229 LAASVFHKQIINIGELKAYLAT 250 + ++ +++ + Sbjct: 230 ICGRSIYEGTLDLRSAQDRADE 251 >UniRef50_D0MJ01 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJ01_RHOM4 Length = 266 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 17/240 (7%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+R G+ V+ Q D V +A + + A L D+ A+ G+ + Sbjct: 4 VIPAIDIRGGRCVRLYQGSYERETVYFDDPVKMACLWRVQNARVLHVVDLDAAR-GQGHN 62 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + + +DIP V GG+++LED +L G ++ + + A+ +P L++ R+G Sbjct: 63 REVIGAICRTVDIPIQVGGGVRTLEDIEALLQVGVYRVVLGTAAVREPELVSEAIARYGC 122 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 +VVGID + + T T + ++ ++++RG V +++D Sbjct: 123 SRVVVGIDAR----------DGEVRVQGWTEGTGVDAVELALDMERRGVRRFVYTDISRD 172 Query: 183 GVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQII 239 G G ++E + + + + ASGG + VD + ++ Sbjct: 173 GTLEGPNVEMYRTLGLHLKKARITASGGVSGYRDLMRLQELEPYRVDSVIIGRALYENRF 232 >UniRef50_B3QRR1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Chlorobiaceae RepID=HIS4_CHLT3 Length = 262 Score = 219 bits (559), Expect = 7e-56, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 112/246 (45%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D++ G+ V+ + + + + +A + ++ A + D+ A+ G+ Sbjct: 1 MLIIPAIDIKGGKCVRLTRGDFEQEKIYLDEPSDMAIIWRKQNAKLIHVVDLDAALTGKP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ + +DIP + GGI++ EDAA+ L G ++ I S A+ +P+L+++L +++ Sbjct: 61 ENFDKIKQIVDTLDIPIEIGGGIRTAEDAARYLDIGVYRVVIGSAAVKNPSLVSQLIEKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IVVGID + T +Q + + E++ RG I+ + Sbjct: 121 GPRKIVVGIDAE----------DGIAKISGWTESSQKKDYELALEMKDRGVERIIYTDIT 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG G E K E + + ASGG + + VD + +++ Sbjct: 171 RDGTLEGVGYETTKAFAEKAQMRITASGGVFGKQDLSKLCKLEHLGVDSVIIGKALYEER 230 Query: 239 INIGEL 244 +L Sbjct: 231 FPCQKL 236 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 1/118 (0%) Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVR 197 G V GD + ++ E D +K+ A I + ++ + +++K++ Sbjct: 11 GGKCVRLTRGDFEQEKIYLDEPSDMAIIWRKQNAKLIHVVDLDAALTGKPENFDKIKQIV 70 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 + +P+ GG T E D V + S K + +L + + + Sbjct: 71 DTLDIPIEIGGGIRTAEDAARYL-DIGVYRVVIGSAAVKNPSLVSQLIEKYGPRKIVV 127 >UniRef50_Q2S296 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Salinibacter ruber DSM 13855 RepID=HIS4_SALRD Length = 258 Score = 219 bits (558), Expect = 7e-56, Method: Composition-based stats. Identities = 50/240 (20%), Positives = 113/240 (47%), Gaps = 16/240 (6%) Query: 6 IIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+RDG+ V+ Q D V +AK + + A L D+ A+ + Sbjct: 4 VIPAIDIRDGRCVRLHQGDYDNETVYFEDPVKMAKLWRVQNAQTLHVVDLDAARGEGEHN 63 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + ++ + +DIP + GGI+S++ L G ++ + + A+ +P + R ++F Sbjct: 64 RDVIGKMCDALDIPIQLGGGIRSMDQIEAALDRGVYRVILGTAAVRNPDFVERAVEQFSA 123 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + +VV ID + + T + + + + +++++RG +V +++D Sbjct: 124 RRVVVSIDAR----------DGEVRVQGWTEGSGLDAVAFAKDMEQRGVRRLVYTDISRD 173 Query: 183 GVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQII 239 G +G +++ + + R++ H + ASGG G + L+ + VD + + ++ Sbjct: 174 GTMDGPNIQAYRTLGRQLAHAKVTASGGVGEHDDLLDIQTLQPYGVDSVIVGTALYENRF 233 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 44/127 (34%), Gaps = 2/127 (1%) Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 D G+ V + GD V + + + + + A + + ++ ++ Sbjct: 6 PAIDIRDGR-CVRLHQGDYDNETVYFEDPVKMAKLWRVQNAQTLHVVDLDAARGEGEHNR 64 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + + K+ + +P+ GG +M+ A V + + + + + Sbjct: 65 DVIGKMCDALDIPIQLGGGIRSMDQIEAALDR-GVYRVILGTAAVRNPDFVERAVEQFSA 123 Query: 251 QGVEIRI 257 + V + I Sbjct: 124 RRVVVSI 130 >UniRef50_A4XL21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Clostridia RepID=HIS4_CALS8 Length = 237 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 14/246 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ DG+ V+ Q D V AK + +EGA L D+ + G Sbjct: 1 MIVIPAIDIIDGKCVRLTQGDYSRVQEYNLDPVQQAKYFEKEGARYLHVVDLDGAKKGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + R+ E + GGI+ + L G D I + S +P + + RF Sbjct: 61 VNFEVIKRIKESTSLSVECGGGIRDKKTINDYLLAGIDYIILGSVIFKNPEFVEDVLKRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + + +D Y T+ + + ++K G +++ + Sbjct: 121 GNERFIASLDFE----------EGYVKLSGWQEATRISVEEGILHIKKLGFQKLIYTDIK 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG+ G++ E K +R + LI+SGG +M L+ +D VDG + + + Sbjct: 171 TDGMLKGHNFEAAKYIRSLFDGFLISSGGISSMNDVLK-LKDIGVDGVIIGKALYTGHVK 229 Query: 241 IGELKA 246 + E+ Sbjct: 230 LNEIIN 235 Score = 47.2 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH 201 V GD SR + + + + +K GA + + ++ + + E +K+++E Sbjct: 15 VRLTQGDYSRVQEYNLDPVQQAKYFEKEGARYLHVVDLDGAKKGSPVNFEVIKRIKESTS 74 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + + GG + + A +D + SV K + ++ + Sbjct: 75 LSVECGGGIRDKKTINDYL-LAGIDYIILGSVIFKNPEFVEDVLKRFGNE 123 >UniRef50_Q3AD49 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Clostridia RepID=HIS4_CARHZ Length = 243 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 103/253 (40%), Gaps = 16/253 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +VV+ Q V LA +Y E GA + D+ + G Sbjct: 1 MILIPAIDLMGKKVVRLTQGEKERKTEYPISPVELALKYQEAGARLIHVVDLDRAFTGES 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ + + + IP V GGI+ +E +++ G ++ + + A+ +P L+ + Sbjct: 61 ENFEVIAEIIKNVSIPVQVGGGIRDIESFRELIDLGVSRVIVGTIAVTNPELLEEML-TL 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + VGID N + + + + LD +V++ G I+ + Sbjct: 120 DRDKVAVGIDAK----------NGWVAIKGWVESSNYRALDLAYKVKEMGVTTIIYTDIA 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL--EAFRDADVDGALAASVFHKQI 238 +DG G + + K+ + +IASGG +E + + G +A + Sbjct: 170 RDGSLTGPNFNETLKLAIDTGLKVIASGGISGLEDLRRWRELGENKIYGVIAGKAILEGK 229 Query: 239 INIGELKAYLATQ 251 I++ E L + Sbjct: 230 IDLKEGIRILEGE 242 >UniRef50_C0W9Y4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9Y4_9FIRM Length = 245 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 16/255 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQF---RNHEIIGDIVPLAKRYAEEGADELVFYDITASSD 57 M A + P +D+R G V+ + + D +A+R+AE GA + D+ + Sbjct: 1 MEAMNLYPAIDLRGGMCVRLEKGNFSKETVYSKDPGAMARRFAEAGARTIHVVDLDGALA 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G+ + S + + I V GGI++ E +LS G ++ + S A+ DP L+ R Sbjct: 61 GKSENLSAIKAILREGGISIEVGGGIRTYEQIEGLLSLGVSQVILGSAAIYDPQLVERAN 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 F + IVVGID N Y + + + + V G I+ Sbjct: 121 RDFPYK-IVVGIDAK----------NGYAAADGWEKDSNLTAEALARRVAAAGTERIIFT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL--EAFRDADVDGALAASVFH 235 +++DG+ NG ++E + + C VP+ ASGG ++E +A ++G + + Sbjct: 170 DISRDGMMNGSNIEATAALYQACGVPITASGGVSSLEDIRRLKARETDGIEGCIIGKALY 229 Query: 236 KQIINIGELKAYLAT 250 ++ + Sbjct: 230 AGAFSLSDALKIAGE 244 >UniRef50_D1B9F8 Histidine biosynthesis protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9F8_THEAS Length = 253 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 90/256 (35%), Positives = 154/256 (60%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M+ KRIIP ++ ++VKG FR+H +GD V A +GA+E+V D+ A+ +GR+ Sbjct: 1 MMPKRIIPQFLLKGSRLVKGTSFRDHVDVGDPVSQAMIQDAQGAEEIVLVDVDATREGRL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 VD S +SR+ E +P V GG+ +++DA+++ GADK+ +N+ A+ +P++I LA+RF Sbjct: 61 VDTSLISRMVERCRLPIAVGGGVGNVDDASRLFVAGADKVIVNTAAVLNPSMIRPLAERF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +VV +D +++ G V S + + ++ ++ GAGE ++ ++ Sbjct: 121 GAQSVVVSLDLKRNSKRGWVPV-----VRSGEEEVDLDFVYLLEALEANGAGEFIVTSVD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++G +G+DL+ LK VREV VPLIASGGAG H +E F D++G + + + Sbjct: 176 REGTLSGFDLDMLKVVREVVKVPLIASGGAGNYLHLVELFLSIDLEGVGIGKMLALRDYD 235 Query: 241 IGELKAYLATQGVEIR 256 + +KA+L +G+ +R Sbjct: 236 VVRIKAFLKGRGIPVR 251 >UniRef50_Q3SPZ7 Histidine biosynthesis n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SPZ7_NITWN Length = 258 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 86/257 (33%), Positives = 139/257 (54%), Gaps = 7/257 (2%) Query: 1 MLAKRIIPCLDVRDGQVVK-GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 ML KR+IP +RDG++VK F N I G+ V AK Y + G DEL+ DI S+ R Sbjct: 1 MLKKRLIPKFLLRDGRLVKYTCFFDNERIAGNPVTTAKVYNDYGVDELIVLDIVPSAASR 60 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + + R++E I +PF V GG+K+ ED +L GADK+SINS A+ P + A Sbjct: 61 ARVEDIIGRMSEEIFMPFTVGGGVKTAEDVNALLRAGADKVSINSEAVRRPEFVREAART 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FG QCI V ID + + + ++W + GEI+++ + Sbjct: 121 FGDQCITVSIDYKRIG-----SHHASVYIDGGREHVALDPVEWALRCEDLHCGEILMSSI 175 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG GYDLE + + + VP+I SGG G+++H ++A +A +S+F Sbjct: 176 DRDGTMQGYDLEMINTLTKRLGVPMIVSGGCGSLQHAIDAL-EAGASAVAISSMFLFTDH 234 Query: 240 NIGELKAYLATQGVEIR 256 + +L+++LA++G+++R Sbjct: 235 SPIKLRSHLASRGLDVR 251 >UniRef50_A9A5X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Thaumarchaeota RepID=HIS4_NITMS Length = 236 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 64/249 (25%), Positives = 120/249 (48%), Gaps = 16/249 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IIP +D+ DGQVV+ + D V +AK++ + GAD L D+ A+ G Sbjct: 1 MKIIPAIDLMDGQVVRLYKGDPKQKTVYSDDPVSVAKKWQKAGADMLHIVDLDATI-GTG 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++++ + IP VAGG+++ E + +SF ++++ I + A D ++ R+A ++ Sbjct: 60 SNLDLIEKISKELSIPVEVAGGLRNEEIIDRAISF-SNRVVIGTMAFKDKEMLQRIAKKY 118 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 IV+ +D H++ + T+ LD + E G E +L ++ Sbjct: 119 DFSKIVISVD----------HIDGFIVTHGWQESTKTPLLDAINEFVSMGFTEFLLTNVS 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G DLE L+K V + +IASGG ++ + R + + ++ I+ Sbjct: 169 KDGTLEGPDLEYLEKACAVQNANVIASGGISNIDDVSDVQRK-NAFAVILGKALYENKIS 227 Query: 241 IGELKAYLA 249 I E K + Sbjct: 228 IEEAKQLVN 236 >UniRef50_B3E201 Histidine biosynthesis protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E201_GEOLS Length = 282 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 94/286 (32%), Positives = 141/286 (49%), Gaps = 33/286 (11%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M RIIP LD++ +VKG+ ++GD + A Y E GADEL++ DI AS R Sbjct: 1 MKPVRIIPRLDIKGPNLVKGIHLEGLRVLGDPIAFAHYYYENGADELIYSDIVASLYQRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + IP +AGG+++L D K L GADK+ IN+ A+ +P I + F Sbjct: 61 SILDLVTETSRSVFIPITLAGGLRTLNDIQKALRAGADKVCINTAAIENPDFIAQAVRVF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IVV ++ + + E+ + + E + WVQ V++ GAGEI+L +N Sbjct: 121 GSSTIVVAVEVVRNDDNSLIAY-----TENGRQSSGIEAVSWVQRVEELGAGEILLTSIN 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK---- 236 +G +GYD++ + +V +P+IA GGAG EH E F +DV A AS+FH Sbjct: 176 AEGTGDGYDMDLINRVVSAVSIPVIAHGGAGKPEHVREVFATSDVRAAAVASMFHYYAKK 235 Query: 237 ------------------------QIINIGELKAYLATQGVEIRIC 258 I+I ELK YL+ G+ R+ Sbjct: 236 LSADMNPVEGNLDFLRSGKSFSRVSEISIVELKQYLSKHGIVCRLV 281 >UniRef50_B6BGE0 Imidazole glycerol phosphate synthase, cyclase subunit HisF n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGE0_9PROT Length = 254 Score = 217 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 84/257 (32%), Positives = 144/257 (56%), Gaps = 5/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M R+I +D+++ +KG+ +G+ +A RY E+G DE+V D AS R Sbjct: 1 MKKIRVIARIDIKNEHTIKGIHLEGLRKVGNPNEMALRYYEDGIDEIVLMDAVASLYDRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 K + + E I IP V GG+++L+D + L+ GADK++IN+ A+ +P+ IT + +F Sbjct: 61 SLKDVIVKACEDIFIPITVGGGLRNLQDIQEALNSGADKVAINTQAIREPSFITTASKQF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI+ I + E+ T + L W +EVQ+ GAGEI+L ++ Sbjct: 121 GSQCIISSIVAKKIDDGKWEAY-----IENGREPTGVDVLAWAKEVQELGAGEIMLTSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++G + G+DLE K V E+ ++P+I+SGGAG+ + + +D+D AS+ H ++ + Sbjct: 176 KEGTKKGFDLELNKAVAELVNIPVISSGGAGSTKDIVHLCESSDIDAVAIASILHYKLES 235 Query: 241 IGELKAYLATQGVEIRI 257 + E+K L +++RI Sbjct: 236 VSEIKKTLINNKIKVRI 252 >UniRef50_A8ESN1 Imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ESN1_ARCB4 Length = 256 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 89/254 (35%), Positives = 141/254 (55%), Gaps = 7/254 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+IPCL + G + K +F+ IGD + K + E+ DEL+F DI AS + R Sbjct: 2 MLQKRVIPCLLLHKGGLYKTEKFKKPTYIGDPINAIKIFNEKEVDELMFIDIDASVEDRE 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +A +P C GG+K++E KI + G +K+SI+S A+ +P LI A F Sbjct: 62 PNYKMIEDIASECFMPLCYGGGVKNIEQMKKIYALGVEKVSISSQAIINPNLIKEAARLF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q ++V ID D K + + T+ +D++++V+ GAGEIV+N + Sbjct: 122 GNQSVIVTIDIKKDFWGNKK-----IFINNGKKNTKLNPIDFIKQVESLGAGEIVINSCD 176 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF-HKQII 239 DG+ GYD+E LK+++E VP+IA GGAG + H + F + VD S+F ++ + Sbjct: 177 NDGIMKGYDIELLKEIKENTKVPIIALGGAGNLNHIKDVFESSKVDAVACGSMFVYQGPL 236 Query: 240 NIGELKAYLATQGV 253 G L +Y + Q + Sbjct: 237 K-GVLISYPSYQKI 249 >UniRef50_A7I1W6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=17 Tax=Epsilonproteobacteria RepID=HIS4_CAMHC Length = 236 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 103/244 (42%), Gaps = 16/244 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+++G V+ + LA+++A+ GA L D+ + G Sbjct: 1 MEILPAIDLKNGFAVRLKKGEMNSAKIYSDKPWELAEKFADLGAKWLHIVDLDGAFAGEA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ + ++ V GGI+ E + G + + S AL +P + ++A ++ Sbjct: 61 KNAKTIEKIVKSTNLKIEVGGGIRDEERIKFYKNSGVSRFILGSAALKNPEFVKQMAKKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 I VGID N + E V+ + + + G I+ ++ Sbjct: 121 ---KIAVGIDAK----------NGFVATEGWAEVSNIKACELAKIYADAGVEAIICTDIS 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ +G +++ +++ + + IASGG + + + G + +++ I+ Sbjct: 168 KDGMLSGVNVKFSEEIAKSSGIKTIASGGVKDLSDIKALKQSGKIYGVIVGKAYYEGSID 227 Query: 241 IGEL 244 + E Sbjct: 228 LKEA 231 >UniRef50_Q47XB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=10 Tax=Alteromonadales RepID=HIS4_COLP3 Length = 261 Score = 216 bits (551), Expect = 6e-55, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 14/250 (5%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSD 57 M+ IP +D+ G+VV+ Q + + YAE GA + F D+ + D Sbjct: 1 MM----IPAIDLIGGEVVRLYQGDYAQKTNYQYTVQDRQQAYAESGATVMHFVDLDGAKD 56 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + V + V GG++ +D ++L+ GAD++ I S A+ P L+T+ Sbjct: 57 STKRQLKTLKTVVNHPSMIIQVGGGVRCEDDVKQLLALGADRVVIGSLAIKQPELVTQWV 116 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 +G + IV+ +D DA+ K + D + + Q G ++ Sbjct: 117 KTYGCEKIVLALDIKIDAQGNK-----TLPTHGWIEDSGVNLEDLLAQYQDAGIKHVLCT 171 Query: 178 MMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 +++DG G +++ +V + + ASGG G++ +A V G + + Sbjct: 172 DISKDGTLTGTNVDLYSEVCAKYPDIDWQASGGIGSLADI-KALIPTGVSGVILGRSLLE 230 Query: 237 QIINIGELKA 246 + E A Sbjct: 231 GKFTLEEAIA 240 >UniRef50_D1U7I5 Histidine biosynthesis protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U7I5_9DELT Length = 289 Score = 216 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 117/238 (49%), Gaps = 5/238 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 + RIIP LD++ +VKG+ F ++G A+ Y E GADEL F D AS R Sbjct: 1 MKFRIIPRLDIKGPNLVKGIHFEGLRVLGKPEDFARHYYENGADELFFQDAVASLYDRNS 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V R + I IP CV GG++S++D +L GADK++IN+ A+ P LI + FG Sbjct: 61 LHDIVKRTSSEIFIPLCVGGGLRSVDDIRAVLRAGADKVAINTEAIKRPELIREASVAFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 IVV I+ A + +Y T ++W + + GAGE+++ ++Q Sbjct: 121 SSTIVVSIEAIRRANGEWEALVEY-----GRETTGVNAVEWAKRACELGAGELMITSIDQ 175 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +G GYD+E + + VP+IA GG G+ D ASV H + I Sbjct: 176 EGTGKGYDIELTRAIASAVSVPVIAGGGCGSPADAANVITQGRADAVSMASVLHYKTI 233 >UniRef50_B8FJR2 Histidine biosynthesis protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJR2_DESAA Length = 262 Score = 215 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 95/265 (35%), Positives = 137/265 (51%), Gaps = 13/265 (4%) Query: 1 MLAKRIIPCLDVRD---GQ-----VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI 52 ML KR+IP L +R G+ +V V F IGD V AK Y + ADELVF D+ Sbjct: 1 MLKKRLIPKLQMRAASFGKTKRMVLVTTVGFGPSTEIGDPVSQAKIYQAQAADELVFLDL 60 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 AS + R +++ AE I +P V GG++S+ED ++L+ GADK+SIN+ A+ P L Sbjct: 61 DASIEHRDALTDIIAKAAEEIFMPITVGGGVRSVEDCRRLLNHGADKVSINTGAMEIPEL 120 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 I + +D FG QCIVV ID T + + W E Q RGAG Sbjct: 121 INQGSDMFGAQCIVVSIDYKKHPNGAY-----EVFTRGGKSSTGLDPVAWAVEAQHRGAG 175 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 EI+L +++DG R G +LE KV +P+I SGG G HF++ F A + Sbjct: 176 EILLTSIDRDGTRKGLNLELTAKVAGAVDIPVITSGGCGLASHFVDGFLVGKAHAVSAGT 235 Query: 233 VFHKQIINIGELKAYLATQGVEIRI 257 F + N + ++ ++ G+ IR+ Sbjct: 236 YFCFKDENPMQTRSRISNAGIPIRL 260 >UniRef50_P72139 Putative imidazole glycerol phosphate synthase subunit hisF2 n=9 Tax=cellular organisms RepID=HIS62_PSEAE Length = 251 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 88/255 (34%), Positives = 141/255 (55%), Gaps = 5/255 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M+ +R+IPCL ++D +VK V+F+ + +GD + + + E+ DEL+ DI AS + Sbjct: 1 MVRRRVIPCLLLKDRGLVKTVKFKEPKYVGDPINAIRIFNEKEVDELILLDIDASRLNQE 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ VA +P C GGIK+LE A KI S G +K+SIN+ AL D +LI R+AD+F Sbjct: 61 PNYELIAEVAGECFMPICYGGGIKTLEHAEKIFSLGVEKVSINTAALMDLSLIRRIADKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +V ID G E+ TR + L+W Q +++ G GEI LN ++ Sbjct: 121 GSQSVVGSIDCRKGFWGG-----HSVFSENGTRDMKRSPLEWAQALEEAGVGEIFLNSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DGV+ G+D ++ + HVP+IA GGAG++ ++ F V A S+F + Sbjct: 176 RDGVQKGFDNALVENIASNVHVPVIACGGAGSIADLIDLFERTCVSAVAAGSLFVFHGKH 235 Query: 241 IGELKAYLATQGVEI 255 L +Y +++ Sbjct: 236 RAVLISYPDVNKLDV 250 >UniRef50_B2A6X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6X1_NATTJ Length = 246 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 114/257 (44%), Gaps = 19/257 (7%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ +IP +D+ +G+ V+ + + +A+ + E+GA L D+ + G Sbjct: 1 MSLELIPAIDLYEGECVRLTEGELGSKKVYSDNPSDMARHFQEQGASRLHLVDLEGAFQG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 V + + + ++A + IP V GGI+S+E ++++ G D++ + + A D + + Sbjct: 61 SVKNSTIIEKIANKVSIPVQVGGGIRSIEAIERLVNMGVDQVILGTKAYNDRDFLQSALE 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 F IV D + GK + V+ +T D++ E+ + G ++L Sbjct: 121 LFHKNIIVG-----VDIKGGKVATEGWV------NVSDTKTYDYLSELTELGVPRVILTD 169 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR-----DADVDGALAASV 233 +++DG G +LE K++ + L+ SGG ++E + ++ G + Sbjct: 170 ISKDGKLQGPNLELFKELAIFTELDLVLSGGMSSLEDINRIQKLQNEIAHNLAGVILGKA 229 Query: 234 FHKQIINIGELKAYLAT 250 ++ I++ + Sbjct: 230 LYEGKIDLQGALETIRK 246 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 41/112 (36%), Gaps = 5/112 (4%) Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY--DLEQLKKVREV 199 V G+ +V D + Q++GA + L ++ +G G + ++K+ Sbjct: 17 VRLTEGELGSKKVYSDNPSDMARHFQEQGASRLHL--VDLEGAFQGSVKNSTIIEKIANK 74 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +P+ GG ++E +E + VD + + + + Sbjct: 75 VSIPVQVGGGIRSIE-AIERLVNMGVDQVILGTKAYNDRDFLQSALELFHKN 125 >UniRef50_Q0AW40 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Clostridia RepID=HIS4_SYNWW Length = 244 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 15/253 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++DGQ V+ VQ R +A+ + E+GA L D+ + G Sbjct: 1 MIIYPAIDLKDGQCVRLVQGRVENKTVYSDAPANVARSFQEQGASFLHIVDLDGAFQGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +A IDI F V GG++ L D K+L+ GA ++ I + A++ P I L D+F Sbjct: 61 QNLKAIEAIAAAIDISFQVGGGLRQLSDVEKLLALGASRVIIGTRAVSHPDFIANLLDKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IV+G+D G V + + +D+ +++ G + ++ Sbjct: 121 GPERIVLGLDAK----EGMVAVEGWVST------SSVSAIDFGLQMKALGIQTAIYTDVS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL--EAFRDADVDGALAASVFHKQI 238 +DG+ G +L +K++ + +IASGG ++++ + + V GA+ + Sbjct: 171 RDGLLQGPNLAAIKEMASSTGLDIIASGGVSSLDNIRALKELENDGVSGAIIGKALYDGK 230 Query: 239 INIGELKAYLATQ 251 I + + ++ Sbjct: 231 IGLVDALREAESK 243 >UniRef50_Q6KZD5 Histidine biosynthesis protein HisF n=1 Tax=Picrophilus torridus RepID=Q6KZD5_PICTO Length = 249 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 92/257 (35%), Positives = 147/257 (57%), Gaps = 8/257 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRII LDVR+G+VVKGV+F + + GD V A Y ++GADE+VF DI+A+ + R Sbjct: 1 MLAKRIIAALDVRNGRVVKGVRFMDIKDAGDPVENAVIYQDQGADEIVFLDISATDEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V V+ ++IPF V GGI+S++ A +L G DK+ +N+ A+ +P +I ++ Sbjct: 61 IMIDLVKSVSRELNIPFTVGGGIRSVKTALNLLREGCDKVFLNTYAIENPWIIKEISRET 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G +V+ +D Y+ Y + + + +W+ + GAGEI+L ++ Sbjct: 121 GSANLVIAVDAMYNNG-------YYVYKNAGRINSGLKLNEWLPMAEYLGAGEILLTSID 173 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG G+D + + + +P+IASGGAG EHFL+AF A S+ H +I Sbjct: 174 SDGTMKGFDNRLISEAASMIDIPVIASGGAGKPEHFLDAFMAGASGALAA-SILHFKINT 232 Query: 241 IGELKAYLATQGVEIRI 257 + ++K YL + GV +R+ Sbjct: 233 VNDIKRYLRSNGVNVRL 249 >UniRef50_A7FJH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=97 Tax=Gammaproteobacteria RepID=HIS4_YERP3 Length = 245 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 108/245 (44%), Gaps = 10/245 (4%) Query: 6 IIPCLDVRDGQVVKGVQFR--NHEIIGD-IVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP LD+ +G+VV+ Q G+ +P + Y ++GA L D+T + D Sbjct: 2 IIPALDLIEGKVVRLHQGDYGQQRDYGNHPLPRLQDYQQQGAQVLHLVDLTGAKDPAARQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + +D+P V GGI++ +D +L GA ++ + S A+ P ++ + +R+G Sbjct: 62 IPLLRELLAGVDVPVQVGGGIRNEQDVVALLEAGAARVVVGSTAVKQPEMVQQWFERYGA 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + IV+ +D + K + + V++ G ++ +++D Sbjct: 122 EAIVLALDVRINEAGCK-----HVAISGWQENSDATLEQIVEQYLPYGLKHVLCTDISRD 176 Query: 183 GVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G +G ++E ++V + V ASGG G ++ R + V G + N+ Sbjct: 177 GTLSGSNVELYQEVCQRYPQVAFQASGGIGCLDDIAR-LRGSGVQGVIVGRALLDGKFNV 235 Query: 242 GELKA 246 E A Sbjct: 236 KEAIA 240 >UniRef50_A0M284 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=35 Tax=cellular organisms RepID=HIS4_GRAFK Length = 241 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 109/252 (43%), Gaps = 15/252 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 RIIP +D+ +G+ V+ + D + +AK + G + L D+ + + Sbjct: 1 MRIIPAIDIIEGKCVRLSKGDYATKKIYNEDPLEVAKSFEAHGIEYLHLVDLDGAKSSHI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + +A + GG+K+ +D GA +I+ S A+ + + +F Sbjct: 61 VNHKILETIANKTSLKIDFGGGLKTDKDLQIAFESGASQITGGSIAVKNSDVFQNWIQKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I++G D K V+ + + E + ++Q +++G ++ ++ Sbjct: 121 GNKKIILGADAK----DRKIAVSGWL------EDSNEEIIPFIQNYEEKGVKYVICTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG+ G E K++ ++ LIASGG + + + +G + ++ I Sbjct: 171 KDGMLEGPSFELYKEILSETKNINLIASGGISEFDELPK-LAELGCEGVIIGKAIYENRI 229 Query: 240 NIGELKAYLATQ 251 ++ + + Y+ Q Sbjct: 230 SLKQFENYILNQ 241 >UniRef50_A6Q4V9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Proteobacteria RepID=HIS4_NITSB Length = 238 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 104/250 (41%), Gaps = 16/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D++DG+ V+ + + +AKR+ E G+ L D+ + G Sbjct: 1 MEILPAIDLKDGKAVRLTKGLMESAKIYSDEPWQVAKRFEEMGSRWLHLVDLNGAFAGEP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ + + GGI+ E K + G +++ + S A+ +P + +A ++ Sbjct: 61 KNLEQIKKIRANTSLKIELGGGIRDEETIRKYIDLGIERLILGSIAVKNPQFVKAMAAKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 I VGID ++ + E + + D +E K G I+ + Sbjct: 121 P---IAVGID----------AIDGFVAVEGWAKTSTMRATDLAREFAKSGVQAIICTDVG 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G +++ + E + IASGG +E + V G + F++ ++ Sbjct: 168 KDGTLSGVNVDFTVSIAEASGIDTIASGGVRDIEDIKKLQATGTVAGVIVGKAFYEGTLD 227 Query: 241 IGELKAYLAT 250 + E + Sbjct: 228 LEEAFRLVQN 237 >UniRef50_Q18DL2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Halobacteriaceae RepID=HIS4_HALWD Length = 245 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 14/250 (5%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRN--HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + +IP +D++DG VV+ VQ GD V AK++ E GA L D+ + +G Sbjct: 7 SFEVIPAVDMQDGDVVQLVQGERGTETRYGDPVVAAKQWVEAGAKTLHLVDLDGAFEGDR 66 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + V + + +DIP + GGI++ DAA +L G +++ + + A+ +P L+ LA+ + Sbjct: 67 MNATAVDAIIDAVDIPVQLGGGIRTANDAASLLDRGVNRVILGTAAVENPDLVAELAESY 126 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + IV DA G+ V+ + T T + GA I+ ++ Sbjct: 127 PGRIIV-----SLDAADGEVVVSGW------TESTGIDPAVAAARFADYGACGILFTDVD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G G +V + +P+IASGG +++ + + + ++ Sbjct: 176 VEGKLAGIQSSVTARVIDAVDIPVIASGGVASLDDI-QTLHTTGAAATVVGTALYENKFT 234 Query: 241 IGELKAYLAT 250 + + + Sbjct: 235 LADAMEVCES 244 Score = 66.4 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 2/119 (1%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 RII LD DG+VV V D A R+A+ GA ++F D+ + S Sbjct: 129 RIIVSLDAADGEVV--VSGWTESTGIDPAVAAARFADYGACGILFTDVDVEGKLAGIQSS 186 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 +RV + +DIP +GG+ SL+D + + GA + + + + + Sbjct: 187 VTARVIDAVDIPVIASGGVASLDDIQTLHTTGAAATVVGTALYENKFTLADAMEVCESD 245 >UniRef50_A3EUM5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Leptospirillum RepID=A3EUM5_9BACT Length = 247 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 107/248 (43%), Gaps = 15/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++ P +D+R+G+VV+ Q R D V A ++ E G L D+ + +G Sbjct: 1 MQLYPAIDIRNGKVVRLTQGRFDQETVYGEDPVRTALQFRERGVQHLHVVDLDGAREGVP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V++S + + + V GG++S + A+ G ++ + + A+ DP + + ++ Sbjct: 61 VNRSLIREIVKAFRGFVQVGGGVRSKDIASFYYDAGVSRLILGTAAIKDPVFLGSMIEQH 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 VGID ++ + + L+ + + + G V ++ Sbjct: 121 P-DLFYVGIDVKDES----------LAVNGWLDLDTQDPLEVMVRMSELGVRGFVYTDIH 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ +G + + + +R VP+IASGG + R+ VDGA+ + ++ Sbjct: 170 RDGLLSGPNFARYETLRRTVRVPVIASGGVRDISDIAR-LREIGVDGAIVGKAIYTGEMD 228 Query: 241 IGELKAYL 248 + E L Sbjct: 229 LTEALRLL 236 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 2/112 (1%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 +DV+D + V D + + R +E G V+ DI + + + Sbjct: 128 IDVKDESL--AVNGWLDLDTQDPLEVMVRMSELGVRGFVYTDIHRDGLLSGPNFARYETL 185 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + +P +GG++ + D A++ G D + +T G Sbjct: 186 RRTVRVPVIASGGVRDISDIARLREIGVDGAIVGKAIYTGEMDLTEALRLLG 237 >UniRef50_C9KKW7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKW7_9FIRM Length = 243 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 16/254 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+R G+ V+ ++ +AK++ +GA L D+ + GR Sbjct: 1 MIIFPAIDIRGGKCVRLLKGDFAKETVFSDKPEEMAKKWQTQGAQFLHLVDLDGALAGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + +DIP + GGI++LE ++L+ G ++ + S A+ DP L+ ++ Sbjct: 61 QNLATVKAILAAVDIPVELGGGIRTLESIDEVLALGVRRVILGSVAVRDPELVKTACAKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + +V DA+ G V+ + E +E++K G I+ ++ Sbjct: 121 GDRIVVG-----IDAKDGIVAVDGWG------VSGDVEATALAKEMKKAGVKTIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG G ++E K+ V ++ASGG ++ + A ++G + + Sbjct: 170 RDGTLAGVNVEATAKLARESGVAVVASGGVKSIADIEALKPYEKAGIEGVIVGKSIYMGT 229 Query: 239 INIGELKAYLATQG 252 +++ E A +G Sbjct: 230 LDLAEAIEIAAKEG 243 >UniRef50_A1W0U8 Putative imidazole glycerol phosphate synthase subunit hisF2 n=17 Tax=delta/epsilon subdivisions RepID=HIS62_CAMJJ Length = 248 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 92/258 (35%), Positives = 136/258 (52%), Gaps = 10/258 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML RIIPC+ +++GQ+VK ++F++ IG + + Y DEL+ DI AS G Sbjct: 1 MLKTRIIPCVLLKNGQLVKSIEFKDFRTIGHLTSTMRIYNARNVDELIILDIDASKSGE- 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +D + +A+ +P + GGIK+LED KIL+ GADKISINS AL D I++ A+RF Sbjct: 60 IDFESIEDLAKECFMPLTIGGGIKTLEDIQKILNLGADKISINSKALEDMDFISKAANRF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIV ID + ++ L+ E +K+GAGE++L ++ Sbjct: 120 GSQCIVCSIDVKRKGGQFCVYDRGNLLEK--------SPLELALEYEKKGAGELLLTSVD 171 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G GYDLE LK + +PLI +GG +EA + D A +FH Sbjct: 172 FEGRAKGYDLELLKIFQNKLKIPLIINGGLSNPSDGVEAL-NLGADALAGAYIFHFSKYT 230 Query: 241 IGELKAYLATQGVEIRIC 258 ++K LA QG +R+ Sbjct: 231 PKDVKEELARQGFAVRLL 248 >UniRef50_A3N3W4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=92 Tax=Proteobacteria RepID=HIS4_ACTP2 Length = 250 Score = 212 bits (541), Expect = 7e-54, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 106/245 (43%), Gaps = 10/245 (4%) Query: 6 IIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP LD+ DG VV+ Q + + Y +GA++L D+T + Sbjct: 7 IIPALDLIDGNVVRLHQGDYAKQTTYSDNPIEQFANYLAQGAEQLHLVDLTGAKYPAKRQ 66 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + ++ + V GGI++ +D A +L+ GA+++ I S A+ D ++ +++G Sbjct: 67 TALIGKIIAETNCQIQVGGGIRTEQDVADLLAVGANRVVIGSTAVKDRAMVKGWFEKYGA 126 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + V+ +D DA K + + +++ Q G ++ +++D Sbjct: 127 EKFVLALDVNIDASGQKI-----IAISGWQEASGVSLEELIEDYQVVGLQHVLCTDISRD 181 Query: 183 GVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G ++ +++ + + +SGG G+++ +A + V G + + N+ Sbjct: 182 GTLAGSNVNLYREICAKYPKIHFQSSGGIGSLDDI-KALKGTGVSGVIVGRALLEGKFNV 240 Query: 242 GELKA 246 E Sbjct: 241 AEAIE 245 >UniRef50_P62356 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Thermus RepID=HIS4_THET2 Length = 235 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 14/243 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 R+IP +D++ G+ V+ + GD V A R+ EEGA L D+ + G Sbjct: 1 MRLIPAVDLKSGKAVRLYEGDPARETPYGDPVEAALRFQEEGATLLHLVDLDRAL-GTGE 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 ++ V RVA + IPF +AGGI+SLE + LS GA + + + A+ DP L+ R+ + G Sbjct: 60 NREAVRRVAASLSIPFQLAGGIRSLEALQEALSLGASRAVVGTVAVKDPGLLARMLEAVG 119 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V +D LD ++ + G ++ + + Sbjct: 120 PDRLAVALDAR----------GLEVVVSGWQEAASASALDLLRAWAEMGVRTLLYTDVRR 169 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG G D E + +VR LI GG + E + VDGAL ++ I + Sbjct: 170 DGTLLGLDREVVARVRAAWPHELIVGGGIASPEDL-HLLQALGVDGALIGKALYEGRIRL 228 Query: 242 GEL 244 E Sbjct: 229 KEA 231 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 2/115 (1%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 R+ LD R +VV V + L + +AE G L++ D+ +D+ Sbjct: 122 RLAVALDARGLEVV--VSGWQEAASASALDLLRAWAEMGVRTLLYTDVRRDGTLLGLDRE 179 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V+RV V GGI S ED + + G D I + R Sbjct: 180 VVARVRAAWPHELIVGGGIASPEDLHLLQALGVDGALIGKALYEGRIRLKEAVWR 234 >UniRef50_B8J249 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Desulfovibrionales RepID=HIS4_DESDA Length = 250 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 110/255 (43%), Gaps = 17/255 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+++G+ V+ Q R + V A+ + E GA L D+ + DG Sbjct: 1 MIIFPAVDIQNGKAVRLKQGRAHESTVFAESPVDAARAWEEAGARWLHVVDLDGAFDGAA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V + + IP + GGI+ + A L G ++ I + AL PTL + F Sbjct: 61 QSRRIVRDICAALAIPVQLGGGIRDMHTAEAYLEAGVSRLIIGTLALEQPTLFADMCRAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V DAE G+ + T + + GA ++ + Sbjct: 121 PGRVGV-----SLDAEGGRLKSRGWV------EDTGMTVDTALPRLLDDGAAFVIYTDIE 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF---RDADVDGALAASVFHKQ 237 +DG++ G ++ L+ + + VP+IA+GG T+E + + + + GA++ ++ Sbjct: 170 RDGMQCGVNVAALEHLARLSTVPVIAAGGVATLEDIQKLYPLTLETSLMGAVSGRALYEG 229 Query: 238 IINIGELKAYLATQG 252 +++ E A++ + Sbjct: 230 TLDLKEANAWIDARK 244 >UniRef50_B0K628 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Thermoanaerobacter RepID=HIS4_THEPX Length = 235 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 110/248 (44%), Gaps = 16/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ + + V+ + + V +AK + E GA + D+ + G + Sbjct: 1 MVLIPAIDIMEEKCVRLTKGDFNTKEVYYENPVDVAKMWEELGAKRIHVVDLDGAKQGHL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + ++ + V GGI++ E + S G + + S A+ D L+ + Sbjct: 61 VNGNIIEQIIKSCKAEIEVGGGIRNRETIDYLFSVGVKYVILGSAAIYDKDLLLYSLSNY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IV D++ G+ V+ + T+ + ++ +++++ G I+ ++ Sbjct: 121 GERTIVG-----IDSKNGEVAVSGWL------EKTKIKDMELAKKMKEIGVKTIIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG NG + + L+ + + V +IASGG ++E + ++ GA+ + IN Sbjct: 170 KDGTLNGPNFKALENILK-TGVQVIASGGISSIEDLKK-LKEMGAYGAIIGKALYIGKIN 227 Query: 241 IGELKAYL 248 + Sbjct: 228 FKSALEVI 235 >UniRef50_C2BYH3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2BYH3_LISGR Length = 240 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D+++G+ V+ Q + D + A ++A GA L D+ + G+ Sbjct: 1 MQIFPAIDIKNGKCVRLYQGDFAKETMMNADPIDQAAKFAAAGATFLHIVDLDGAVSGKP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + R+ + + IP V GGI+++ L GA+++ I S AL+DP + ++ Sbjct: 61 TNIALIQRLQQQVKIPIQVGGGIRTMTQVDTYLRAGAERVIIGSAALSDPDFVKAAVTKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I++GID N + E +++ + + E+ K G I+ ++ Sbjct: 121 GDK-IIIGIDAK----------NGFVATEGWLQLSDKKATTFAGEIAKLGVNTIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G + E+L+ +++ + +IASGG + E GA+A ++ I Sbjct: 170 KDGTLAGPNFEELRAIQKSARIAVIASGGVSSKADL-EQLAAEGFYGAIAGKALYEGKIT 228 Query: 241 IGELKA 246 + ++ Sbjct: 229 MADVLE 234 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 40/119 (33%), Gaps = 2/119 (1%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 +II +D ++G V + A A+ G + +++ DI+ + Sbjct: 123 KIIIGIDAKNGFV--ATEGWLQLSDKKATTFAGEIAKLGVNTIIYTDISKDGTLAGPNFE 180 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + + I +GG+ S D ++ + G + + + G Sbjct: 181 ELRAIQKSARIAVIASGGVSSKADLEQLAAEGFYGAIAGKALYEGKITMADVLEVEGHA 239 >UniRef50_B9E171 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=8 Tax=Bacteria RepID=HIS4_CLOK1 Length = 238 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 117/247 (47%), Gaps = 15/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D++ G+ V+ + + D A ++ EGA L D+ + G Sbjct: 1 MIILPAIDLKGGKCVRLYKGDMNSQEVVARDPFETALKFKSEGAQYLHMVDLDGALKGSG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +S++ + +D+P V GGI+++E K + G ++ + + AL + L+ + + + Sbjct: 61 ENLDIISKIVKNVDVPIEVGGGIRNIETIDKFIKLGVSRVILGTAALKNKELVIKAVENY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I VGID + + T +++ +D+ +E++K G ++ ++ Sbjct: 121 -DEKIAVGIDAK----------DGVPAADGWTTLSKTNYIDFGKEMEKIGVQTLIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G +LEQL K++ +IASGG +E ++ + +V GA+ + + ++ Sbjct: 170 KDGTLEGTNLEQLLKLKNSVKCNVIASGGIKDIEDI-KSLKKENVYGAIVGKAIYAKTLS 228 Query: 241 IGELKAY 247 + + Sbjct: 229 LKKAIEI 235 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 2/113 (1%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 +D +DG V + + K + G L+F DI+ + + ++ Sbjct: 128 IDAKDG--VPAADGWTTLSKTNYIDFGKEMEKIGVQTLIFTDISKDGTLEGTNLEQLLKL 185 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + +GGIK +ED + + A + + + G Sbjct: 186 KNSVKCNVIASGGIKDIEDIKSLKKENVYGAIVGKAIYAKTLSLKKAIEIGGN 238 >UniRef50_C5BRY3 Imidazoleglycerol phosphate synthase, cyclase subunit n=2 Tax=Bacteria RepID=C5BRY3_TERTT Length = 259 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 96/252 (38%), Positives = 140/252 (55%), Gaps = 5/252 (1%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 R I LDV+ Q++K + ++GD AKRY E+GADEL++ D+ AS GR K Sbjct: 10 RFIARLDVKGDQLIKAIHLEGLRVVGDPQIYAKRYYEQGADELLYIDLVASLYGRNKLKD 69 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 VSR A+ I IP V GGI+S+ED ++L+ GADK++IN+ A+A+P LI ++A RFG QC Sbjct: 70 IVSRTAQDIFIPLTVGGGIRSVEDVTELLAAGADKVAINTAAVANPALIEQVALRFGSQC 129 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 +V+ I+ E ++ V + + + W +E +RGAGEI+L ++Q+G Sbjct: 130 MVLSIEAKRLGED-RWEVYTDCA----RESSGRDVIAWAKEAVERGAGEILLTSIDQEGT 184 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 R G+D V E VP+IASGG G EH + A H + I L Sbjct: 185 RKGFDTALTAAVAETVRVPVIASGGYGQPEHINAITHQGSANAIAFADALHFERETIASL 244 Query: 245 KAYLATQGVEIR 256 K+Y A G+ +R Sbjct: 245 KSYGAEAGLRVR 256 >UniRef50_D0LIZ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Nannocystineae RepID=D0LIZ1_HALO1 Length = 239 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 94/251 (37%), Gaps = 15/251 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D+ G VV+ Q + E + + +R+A GA+ + D+ + G Sbjct: 1 MKIYPAIDLLGGNVVRLHQGKRSEALVYSNEPAEIVRRFASAGAERVHVVDLDGAFSGER 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ +A +P V GGI+ + + GA + + A+ +P Sbjct: 61 AHREALAEMAAASPVPLQVGGGIRDRAALEAVFATGAGFAVLGTAAVKNPAFAREACAAH 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 IV DA G + + + + GA ++ + Sbjct: 121 PGCVIVA-----VDARDGVVAIEGWV------ESAGITAEELGKRAADWGAAGLLYTDVM 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + G ++ + + +P+IASGG GT++ A A V + ++ Sbjct: 170 RDGAQVGPNIATTAALAQAVDIPVIASGGVGTLDDI-RALAAAGVPSVVVGRALYENKFT 228 Query: 241 IGELKAYLATQ 251 + E A + Sbjct: 229 LPEALAAARGE 239 >UniRef50_B1H0E7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=HIS4_UNCTG Length = 244 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+R G V+ Q D V +AK + +GA L D+ + G Sbjct: 1 MIIIPAVDIRQGNSVRLKQGNIDAETIYSKDPVFIAKLWKSKGAKRLHVVDLDGAFSGTN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++K+ + + +DIP V GGI++++ ++ GA + + A +P ++ + R+ Sbjct: 61 INKAIIKNICAAVDIPVEVGGGIRNMDKIKEVFDIGAAYAILGTVAFNNPEIVKKAITRY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I+V +D + +T E + V ++++ G EI+ ++ Sbjct: 121 GSEKIIVAVDAK----------DGKVAISGWKDITPIEASELVNKLKEIGVQEILYTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG+ G D LKK+ E + +IASGG T+++ ++ + V A+ S + Sbjct: 171 RDGMFTGPDFAGLKKLSE-SGMRIIASGGVKTIDNLVKLKKYEKDGVFAAIVGSALYTDD 229 Query: 239 INIGELKAYLAT 250 + + + Sbjct: 230 FKLEDAIEEIEG 241 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 39/115 (33%), Gaps = 1/115 (0%) Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC 200 V G+ + + + + + +GA + + ++ + +K + Sbjct: 14 SVRLKQGNIDAETIYSKDPVFIAKLWKSKGAKRLHVVDLDGAFSGTNINKAIIKNICAAV 73 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +P+ GG M+ E F D A+ +V + + ++ + + Sbjct: 74 DIPVEVGGGIRNMDKIKEVF-DIGAAYAILGTVAFNNPEIVKKAITRYGSEKIIV 127 >UniRef50_B0R4B2 Imidazole glycerol phosphate synthase subunit hisF n=24 Tax=cellular organisms RepID=HIS6_HALS3 Length = 273 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 112/268 (41%), Positives = 146/268 (54%), Gaps = 14/268 (5%) Query: 2 LAKRIIPCLDVR---DGQ--VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS 56 L KR+IPC+DV DG+ V GV F GD V +AKRY E GADE VF DITAS+ Sbjct: 3 LTKRVIPCIDVDLDDDGEPAVYTGVNFEELAYTGDPVEMAKRYNEAGADEFVFLDITASA 62 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +GR VS VA+ + IP V GGI+ +D + L GADK+SINS A+ADP+L+ R Sbjct: 63 EGRETMLDTVSAVADEVFIPLTVGGGIRDTDDIRETLRAGADKVSINSGAIADPSLVDRG 122 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYH--------VNQYTGDESRTRVTQWETLDWVQEVQK 168 A FG QCIV+ +D + H T + ++WVQE Q+ Sbjct: 123 AKAFGSQCIVISVDARRRFDEQGQHYTQVDGESCWFECTVHGGREGTGMDAIEWVQEAQR 182 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 RGAGE+ +N ++ DG ++GYD+ V + P+IAS G G + DA D A Sbjct: 183 RGAGELFVNSIDADGTQDGYDVPLTAAVCDAVSTPVIASSGCGAPG-DMADAYDAGADAA 241 Query: 229 LAASVFHKQIINIGELKAYLATQGVEIR 256 LAAS+FH +I E K LA G IR Sbjct: 242 LAASIFHFDEYSIAETKETLADAGYPIR 269 >UniRef50_B1CBX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBX0_9FIRM Length = 234 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 110/245 (44%), Gaps = 15/245 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+RD + V+ Q + + +A+ + + G L D+ A+ G++ Sbjct: 1 MIIFPAIDIRDNKCVRLSQGDYDKQTVYFDNPFTVAEDFEKRGVKYLHIVDLDAALIGKL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ ++ V GGI+ E K + G D++SI + A+ D + +++++ Sbjct: 61 TNFDIIKKIITDTNMLIEVGGGIRGEEQIKKYVDIGVDRVSIGTKAVKDFAFLKEMSEKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I + +D ++Y + + + D++ +++ IV+ + Sbjct: 121 PYK-ISLSLDVK----------DEYVYIKGWSENSGILIWDYLDKIKDLPLTGIVVTDIK 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ +G E +K+++ ++ SGG +++ + ++ D G + ++ + Sbjct: 170 KDGMLSGPSFELYRKLKKATKHNIVVSGGVSSLDDINK-LKEDDTYGVIVGKALYENKFS 228 Query: 241 IGELK 245 + ++ Sbjct: 229 VEDII 233 >UniRef50_C7PAV4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=8 Tax=Bacteria RepID=C7PAV4_CHIPD Length = 389 Score = 209 bits (533), Expect = 7e-53, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 15/248 (6%) Query: 6 IIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+ DG+ V+ Q + +AK + G L D+ + G VV+ Sbjct: 148 VIPAIDIIDGKCVRLTQGDYAQKKVYNEHPLEVAKAFESIGIRRLHLVDLDGAKKGAVVN 207 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + +A ++ GGIK+ +D + GA +I S A+ DP L + ++G Sbjct: 208 WKVLEAIAGKTNLVIDFGGGIKTEDDLRIVYENGAALATIGSIAVKDPALFSGWVKKYGA 267 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 I +G D + T+ D+++E K+G I + +D Sbjct: 268 DKIFLGADVKEEK----------IAVGGWLETTELSVFDFLEENVKQGVQHIFCTDIAKD 317 Query: 183 GVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G+ G + +K+ + + +ASGG TM A +A G + +++ I++ Sbjct: 318 GLLQGPSVALYEKILQRFPQIDFVASGGVSTMADV-HALAEAGCSGVIVGKAIYEERISM 376 Query: 242 GELKAYLA 249 EL ++ Sbjct: 377 KELADFIK 384 >UniRef50_UPI00016BFDF6 putative 1-(5-phosphoribosyl)-5- n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFDF6 Length = 236 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 108/248 (43%), Gaps = 15/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 RI P +D+++GQ+V+ + + + D + + + +EGA L D+ + G + Sbjct: 1 MRIFPAIDIKNGQIVRLTEGKYDQVKVYSKDPEEVLEHFTKEGATALHIVDLDGAKSGTI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +++ + + + + GGI+ L+ G D++ + + A+ +P + + ++ Sbjct: 61 ENQNTIKTILKNRHFVTQLGGGIRDESTINHYLNMGVDRVILGTVAVENPKFVEEMVKKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q I VG+D + ++ + +++ + + G I+ ++ Sbjct: 121 -DQQIAVGVDEK----------DGQVRANGWLVNSKVDAIEFCKMLTAMGVATIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G D+ +++ + V +IASGG ++ E + V G + ++ I Sbjct: 170 KDGMMAGCDMASYRQLCKDRKVNIIASGGVTSIAEIKE-LKRIGVAGVIVGKAIYEGKIA 228 Query: 241 IGELKAYL 248 + E A Sbjct: 229 LREATAIC 236 >UniRef50_Q4JW54 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=144 Tax=Bacteria RepID=HIS4_CORJK Length = 258 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 13/249 (5%) Query: 6 IIPCLDVRDGQVVKGVQF--RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 ++P +DV DGQ V+ VQ G + A + GA+ + D+ A+ GR + Sbjct: 12 LLPAVDVADGQAVRLVQGAAGTETSYGAPIEAALAWQNAGAEWIHLVDLDAAF-GRGSNF 70 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + V +D+ ++GGI+ E + LS G +++I + AL DP + R+G + Sbjct: 71 ELLKEVTGQLDVNVELSGGIRDDESLERALSTGCRRVNIGTAALEDPEWCESVISRYGDK 130 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + +G+DT + +T D E + ++ + +G +V+ +++DG Sbjct: 131 -VAIGLDTREVDGEWRLRGRGWTSDGG-------ELWEVLERLDSQGVSRLVVTDVSRDG 182 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL--EAFRDADVDGALAASVFHKQIINI 241 + NG +++ L++V P++ASGG +++ A VD A+ + + Sbjct: 183 MLNGPNIDLLREVAAATDAPVVASGGISSLDDIRALAAVVHEGVDSAIVGKALYAGKFTL 242 Query: 242 GELKAYLAT 250 E Sbjct: 243 EEALEAAQG 251 >UniRef50_A3CTR9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Methanomicrobiales RepID=HIS4_METMJ Length = 239 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 14/250 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH--EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 I P +D+ DG+ V+ VQ R + GD A R+ +EGAD L ++ + Sbjct: 1 MEIYPAVDILDGRCVQLVQGRPEAATVYGDPAAWAHRWLDEGADGLHVVNLDGAFGRARK 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + + + GGI+S+EDAA L G D++ +++ A+ +P +I LA+ FG Sbjct: 61 NADLIRAFTRETETFTELGGGIRSVEDAAGWLDAGVDRVIVSTQAVREPEMIRTLAEEFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + ++ GID G+ + + L W + + GAG ++ ++ Sbjct: 121 GERVMAGIDARA----GEVMIEGWERPAG-------SYLSWAERFESLGAGSLLYTNVDV 169 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +G++ G +E + ++ VP++ SGG + A RDA GA+ S + + + Sbjct: 170 EGLQQGIAIEPVTELLARVKVPVVVSGGISSPGDV-AALRDAGAAGAVLGSALYAGKVRL 228 Query: 242 GELKAYLATQ 251 E Sbjct: 229 PEAMEAAHAN 238 >UniRef50_A6T0B3 Imidazoleglycerol phosphate synthase n=4 Tax=Proteobacteria RepID=A6T0B3_JANMA Length = 253 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 79/247 (31%), Positives = 136/247 (55%), Gaps = 5/247 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLA R++PCL + G +VK VQF+ IGD V + + ++ DEL+ DITA+++ R Sbjct: 1 MLAIRVMPCLLMDQGALVKTVQFKKPTYIGDPVNAVRIFNQKEVDELLLIDITATTEKRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +D + ++ +P C GG+ +L D ++ G +KIS+++ A+ +P L+ A F Sbjct: 61 IDFETLEKLVTECFMPICYGGGVDNLVDMRRLYHLGIEKISLSAAAITNPELVREAAAEF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q IVV +D + GK+ V + G T+ ++ +E+++ GAGEI+L ++ Sbjct: 121 GNQAIVVTLDVKKNLF-GKHTVRTHQGK----TDTKRSPVEVAREMEQAGAGEILLYSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G+DL+ ++ V +P+IA GGAG + H A +A S+ Q + Sbjct: 176 KDGTWSGFDLDLIQNVTRAVGIPVIACGGAGELAHLRSAVNEAGASAVAIGSMAVFQAKD 235 Query: 241 IGELKAY 247 +G L + Sbjct: 236 LGVLIKF 242 >UniRef50_A6LDI6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=24 Tax=Bacteroidetes RepID=HIS4_PARD8 Length = 239 Score = 207 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 107/248 (43%), Gaps = 15/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ DG+ V+ Q D + +AK + G L D+ + +GR+ Sbjct: 2 IELIPAIDIIDGKCVRLTQGDYATKKVYNEDPLEVAKMFEGNGIRRLHVVDLDGAREGRI 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + R+A + GG+K +D GA ++ S A+ +P + T +F Sbjct: 62 INYRILERIATRTSLIIDFGGGLKQEDDLEIAFESGAQMVTGGSIAVKNPEMFTSWISKF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I++G D T E + +++ +G +++ + Sbjct: 122 GSEKIILGADAKEKK----------IAISGWEETTSQELVPFIKGYYDKGITKVICTDIA 171 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG+ G ++ K++R E+ + +IASGG ++E + +A + + ++ I Sbjct: 172 RDGMLQGPAIDLYKEIRDEIPFLYIIASGGVSSIEDIEK-LSEAGIPAVIFGKAIYEGKI 230 Query: 240 NIGELKAY 247 + +L + Sbjct: 231 QLKDLLRF 238 >UniRef50_Q58927 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Euryarchaeota RepID=HIS4_METJA Length = 237 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 125/250 (50%), Gaps = 16/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D++D + V+ +Q ++ + + V +AK++ +EGA+ L D+ A+ G Sbjct: 1 MIIIPAVDLKDKKCVQLIQGDPNKKHLELNNPVEVAKKFVDEGAEYLHIIDLDAAF-GTG 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + + + +++P V GGI++LE A +++S G D++ + + A+ +P I L Sbjct: 60 NNRDVIKNIIKEVNVPVEVGGGIRNLEIAKELISLGVDRVIVGTKAILEPKFIDDLNKEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IV+ ++ + ++ ++E + + G I+ ++ Sbjct: 120 GKDKIVLAVECK----------EGKVVIKGWKEKVDKTPIEVIKEFEDK-VGYILFTNVD 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G+ G +++ +K++ E +P+I SGG T+E +A ++ + G + S +K +I+ Sbjct: 169 VEGLLKGINVDIIKELIEKTDIPIIYSGGITTLEDI-KALKELGIYGVVIGSALYKGLID 227 Query: 241 IGELKAYLAT 250 + + + Sbjct: 228 LKKALEIVKN 237 >UniRef50_UPI0001C3165B phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3165B Length = 246 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 110/251 (43%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+R G V+ Q D + A+ + E GA L D+ + DGR Sbjct: 1 MILYPAIDIRGGSAVRLRQGDFADETVYDADPLSAARAWVEGGARWLHVVDLDGARDGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + R+A + +P GG++S + GA+++ + + A AD + + + Sbjct: 61 ANLEHLRRIAGELGVPVEFGGGLRSRASVDAAIEAGAERVILGTAAFADVDFLDDVVAAY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + +V D GK + T+ E + +Q+RG ++V + + Sbjct: 121 GERVVV-----SVDVRGGKVASAGWK------EQTEMEAAAVIDHLQRRGVRKLVYSNIE 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG+ G DL+++++V E I SGG G+++H R +++G + +++ Sbjct: 170 RDGMLTGPDLDEVRRVAESVRGSFIYSGGIGSLDHLAALASLRQVNLNGVIVGKALYERK 229 Query: 239 INIGELKAYLA 249 +G+ L Sbjct: 230 FTVGDALTALK 240 >UniRef50_UPI0001C41EB6 phosphoribosylformimino-5- aminoimidazole carboxamide ribotide isomerase HisA n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41EB6 Length = 246 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 123/248 (49%), Gaps = 15/248 (6%) Query: 3 AKRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 I+P +D+R G+ V+ VQ + +I + +AK++ + GA+ + D+ + + Sbjct: 7 KMLIMPAVDIRGGKCVQLVQGKPGSEQVVIENPEKVAKKWEDAGAEVVHVIDLDGALE-S 65 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V + + ++ + +P + GGI+S+E A ++L+ D++ I + + +P +I++L++ Sbjct: 66 VTNIETIKKILNEVSVPIQLGGGIRSIEYAEELLNLDIDRLIIGTMGIKNPEIISKLSNE 125 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 +G + +++ +D ++ K + + + +E Q+ GAG I+ + Sbjct: 126 YGSERVMISLD----SKDNKVVIKGW------QEKIDKSASEISKEFQELGAGSILFTNV 175 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + +G+ G+ ++ + + + +P++ SGG +++ + + G + S +K I Sbjct: 176 DVEGLLGGFYVDPVIDLVDSVDIPVVYSGGVTSLDDLKQ-LQTTGAKGVVIGSALYKDKI 234 Query: 240 NIGELKAY 247 + + Y Sbjct: 235 KLEDALKY 242 >UniRef50_C0BNI2 Histidine biosynthesis protein n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BNI2_9BACT Length = 248 Score = 206 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 9/256 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML RIIP L +VK F+N ++G+ V A+ + G DEL+F DI A+ R Sbjct: 1 MLKNRIIPILTFNGLGLVKTKGFKNPRMVGNPVQTARVFNSRGVDELIFLDIYATKQSRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ S V V + +P + GGI++++ +L GADK+ I S AL D + + F Sbjct: 61 INLSLVKEVIKECYMPVSIGGGIQTIDQINDLLKIGADKVVIKSKALTDKKFLKEAINFF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI + +D + + + +++ E+ AGE+++N +N Sbjct: 121 GSQCICISVDVLFVNNNYLIY---------NDLGLKISLEEFITEMSLINAGELLVNSVN 171 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGV NG+D++ + KV ++ +P+IA+GG G EH+ F ++ ++S+FH Sbjct: 172 NDGVMNGFDIDLINKVEQMTTIPVIAAGGGGEPEHYSTLFNKTKINAVASSSIFHFTQYT 231 Query: 241 IGELKAYLATQGVEIR 256 ++K L +R Sbjct: 232 PLDIKNELKKFNFPVR 247 >UniRef50_Q7V958 Putative imidazole glycerol phosphate synthase subunit hisF2 n=1 Tax=Prochlorococcus marinus str. MIT 9313 RepID=HIS62_PROMM Length = 261 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 14/265 (5%) Query: 1 MLAKRIIPCLD--VR------DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI 52 ML KR+IP L ++ +V QF + IGD V AK Y + ADELV D+ Sbjct: 1 MLKKRLIPKLQFSIKPSYRGPKPVLVITRQFDSKRAIGDPVSQAKIYEAQLADELVLVDL 60 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 +SD + +S ++E + P V GGI S E ++L GADK+ +NS A+ +P L Sbjct: 61 EGTSDSWPILLDTLSNMSESLATPLSVGGGITSFEQVQQLLDRGADKVVLNSGAVNNPQL 120 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 I +A+ +G QC+V+ ID +++ + + + + T W W + RGAG Sbjct: 121 IDLVANSYGSQCVVISIDIRKESDLSR-----HVYIDGGSTATDWSLFSWANDCASRGAG 175 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 E+++ ++ DG G DL+ ++++R ++PLIASGG G +HF+ + A + Sbjct: 176 ELLITSIDNDGTGTGLDLDSIRQLRYEVNLPLIASGGCGLAQHFVAG-YEVGASAVAAGT 234 Query: 233 VFHKQIINIGELKAYLATQGVEIRI 257 F ++ N + ++++ G+ IR+ Sbjct: 235 FFSQRDQNPMQCRSHIRNAGLPIRL 259 >UniRef50_B2UX21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Firmicutes RepID=HIS4_CLOBA Length = 237 Score = 206 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 120/247 (48%), Gaps = 15/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+ DGQ V+ Q + DI +AK + GA+ + D+ + G Sbjct: 1 MIILPAIDIIDGQAVRLYQGDYNKKEVVANDIFNIAKEFECLGAEYIHLVDLDGAKSGYC 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V++ + ++A+ +D+P V GGI++ E K++ G ++ + + A+ D L+ + + + Sbjct: 61 VNEKIILKLAQTVDVPIEVGGGIRNFETIEKLIENGISRVILGTIAMEDEGLLKKAIECY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I VGID N Y ++ LD+ + ++ G I++ ++ Sbjct: 121 G-EKISVGIDCK----------NGYVYGRGWLAESKLNYLDFAKNMESLGVKSIIVTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G + + L K++++ ++ + ASGG +E+ E ++ D+ GA+ + ++ Sbjct: 170 KDGTLEGPNFDMLMKLKKLVNIDITASGGIRDIENIKE-LKNIDIYGAITGKAIYSGNLS 228 Query: 241 IGELKAY 247 + E Sbjct: 229 LKEAIDI 235 >UniRef50_B4SDB6 Histidine biosynthesis protein n=9 Tax=Bacteria RepID=B4SDB6_PELPB Length = 256 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 131/256 (51%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M R+I LD++ ++KG+ +IG A RY ++G DEL++ D AS R Sbjct: 1 MRNIRLIARLDIKGPNLIKGIHLEGLRVIGSPNEYALRYYQQGVDELIYMDCVASLYDRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + A+ I +P V GGI+S+EDA +IL GADK+++N+ A+A+P LI ++ RF Sbjct: 61 HLGDIIRSAAKDIFVPMTVGGGIRSVEDATQILRSGADKVAVNTAAVANPKLINEISRRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+ I+ + ++ T + + WV++ GAGE++L ++ Sbjct: 121 GSQCMVLSIEAKEVGKDRW-----EVYTDNGRERTGLDVIAWVKKGVAMGAGEVLLTSVD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++G R G+D +K V +P+IASGG G E + D A + H Sbjct: 176 REGTRKGFDTALVKAVTAEVSIPVIASGGMGKPEDLVGVVSVGGADAVAMADILHYNRAG 235 Query: 241 IGELKAYLATQGVEIR 256 IGE++ G+ +R Sbjct: 236 IGEIRNVAKETGMGVR 251 >UniRef50_Q7UG70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodopirellula baltica RepID=HIS4_RHOBA Length = 253 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 103/254 (40%), Gaps = 18/254 (7%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 I P +D+R G+ V+ Q D V AKR+ E GA L D+ A+ Sbjct: 11 RMEIWPAIDLRHGKPVRLRQGDYDQQTTFGDDPVEFAKRWQESGAKRLHLVDLDAARGDS 70 Query: 60 VV-DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 ++ V R+ E +P + GG++ +L+ G ++ + S AL DP + D Sbjct: 71 PDANRDAVQRIIEATGLPCQMGGGVRDEITIESLLNVGVTRLVVGSRALKDPDWFVEMCD 130 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR--GAGEIVL 176 ++ + + DA GK + + ++ +++ R IV Sbjct: 131 KYPGKLVAG-----IDARDGKVATQGWL------ETSDVSAFEFATKLRSRTENIAAIVY 179 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + +DG+ G + E L ++ +PL+ASGG T + + + + A+ + Sbjct: 180 TDIAKDGMMQGPNFEGLAEMAAASDIPLVASGGVTTYDDIKQ-LVEMKMPAAIVGRSLYD 238 Query: 237 QIINIGELKAYLAT 250 ++ +GE+ Sbjct: 239 GVMELGEVVRLAGD 252 >UniRef50_Q039B4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Lactobacillales RepID=HIS4_LACC3 Length = 238 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 14/246 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++ P +D+ +G+ V+ Q ++ D + A+R + G L D+ + R + Sbjct: 1 MKLYPAIDLLNGKSVRLTQGDYDQVSLTEDPLYQAQRLTDAGFAHLHLVDLDGARAQRPI 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +++ ++R+ E + GGI++L L+ G D++ + S A++DP L+ + RFG Sbjct: 61 NRTVITRIREQTSAFIELGGGIRTLAAMEIYLTIGIDRLILGSAAVSDPDLVEQAIARFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 I VGIDT +Q + +Q+RG ++ + + Sbjct: 121 SNRIAVGIDTRA----------GKVATNGWLTTSQQTANALLTAMQQRGVTTFIVTDIAK 170 Query: 182 DGVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG+ G + + L +++ +IASGG + + A + A+ + I Sbjct: 171 DGMMQGPNAQLLADLQQAMPQATIIASGGISLLADLHR-LQTAGIQAAIIGKAWQTGAIE 229 Query: 241 IGELKA 246 + LK Sbjct: 230 LAMLKQ 235 Score = 40.2 bits (93), Expect = 0.060, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 1/99 (1%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + L Q + G + L ++ + + + ++RE + GG T+ Sbjct: 29 EDPLYQAQRLTDAGFAHLHLVDLDGARAQRPINRTVITRIREQTSAFIELGGGIRTLA-A 87 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +E + +D + S + + A + + + Sbjct: 88 MEIYLTIGIDRLILGSAAVSDPDLVEQAIARFGSNRIAV 126 >UniRef50_D2Q1W2 Bifunctional HisA/TrpF protein n=2 Tax=Actinomycetales RepID=D2Q1W2_9ACTO Length = 256 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 109/245 (44%), Gaps = 17/245 (6%) Query: 6 IIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 ++P +DV DGQ V+ VQ + GD + A + E GA+ + D+ A+ GR ++ Sbjct: 18 LLPAVDVADGQAVRLVQGEAGSETSYGDPLAAATAWQEAGAEWIHLVDLDAAF-GRGSNR 76 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 ++ V +D+ ++GGI+ E L+ GA +++I + AL DP R+ +G + Sbjct: 77 ELLADVTGRLDVQVELSGGIRDDESLEAALATGARRVNIGTAALEDPEWCDRVIQTYGDR 136 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + +G+D +T + + + ++ +++ G V+ + +DG Sbjct: 137 -VAIGLDVR----GRTLAARGWTKEGG-------DLYEVLERLERAGCERYVVTDVTKDG 184 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQIINI 241 + G +L+ + + P++ASGG +++ V+G + + + Sbjct: 185 MLQGPNLDLYRDLCARTAKPIVASGGVSSLDDLRALATLVPDGVEGVIVGKALYAGAFTL 244 Query: 242 GELKA 246 E Sbjct: 245 TEALE 249 >UniRef50_B8IPH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=142 Tax=cellular organisms RepID=HIS4_METNO Length = 253 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 104/261 (39%), Gaps = 16/261 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M + P +D+++G+ V+ VQ + D A +AE+G L D+ + Sbjct: 1 MTRVILFPAIDLKEGRCVRLVQGDMAQAIVFSDDPAAQAASFAEQGFSWLHVVDLDGAFA 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G ++ + V + + IP + GGI+ + L+ G ++ I + A+ DP + A Sbjct: 61 GAPMNAAAVDAILAAVTIPVQLGGGIREMRTVEGWLAKGVSRVIIGTAAVRDPAFVREAA 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 F + V DA+ G+ V + + + + + G ++ Sbjct: 121 RLFPGRIAVG-----IDAKDGRVAVEGWAKT------STVTAEELGRRFEDAGVAALIYT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR--DADVDGALAASVFH 235 + +DGV G ++ + + +P+IASGG ++E A + GA+ + Sbjct: 170 DIARDGVLKGLNIPMTLALAQAVSIPVIASGGLASIEDVHRILEPDCALLAGAITGRALY 229 Query: 236 KQIINIGELKAYLATQGVEIR 256 I+ E A + R Sbjct: 230 DGRIDPREALAAIRRAEEARR 250 >UniRef50_C9RH20 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Methanocaldococcus RepID=C9RH20_METVM Length = 237 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 119/247 (48%), Gaps = 16/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++D + V+ +Q + + D V +AK++ +GA+ L D+ A+ G Sbjct: 1 MIVIPAVDLKDKKCVQLIQGDPTKKHLELEDPVNVAKKWVHDGAEYLHIVDLDAAL-GCG 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ E ++IP V GGI+SL A +++ G DKI + + A+ DPT + L Sbjct: 60 NNVDVIEKIVEEVNIPVEVGGGIRSLTIAKRLMDIGVDKIVVGTKAITDPTFLNELLSEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I++ ++ + ++ ++ +K+ G I+ ++ Sbjct: 120 EREKIILAVECKQ----------GKVAIKGWKETINKNPIEIAKKYEKK-VGGILFTNVD 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G+ +G + ++ + + VP+I SGG T+E + ++ VDG + S +K IIN Sbjct: 169 VEGMLSGIKTDIIETLVKNVRVPIIYSGGITTLEDIKK-LKEIGVDGVIIGSALYKGIIN 227 Query: 241 IGELKAY 247 + + Sbjct: 228 LKDALKI 234 >UniRef50_D0RQP1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQP1_9RICK Length = 238 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 107/249 (42%), Gaps = 14/249 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++DG+ V+ + + + AK + ++G + L D+ + Sbjct: 1 MIIYPAIDLQDGKCVRLTKGDFEQQTVYSRSPIEQAKAFEDKGFEFLHVVDLDRTIHKEK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + + + V GG+++ + +++ G + + + A+ DP L+ ++ ++ Sbjct: 61 SNLKTIKEIIQSTGLKVQVGGGLRTKDTVEEVIDLGVENAVMGTAAVNDPDLLIEISQKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 I VG+D + T+ D+++ ++ I+ +N Sbjct: 121 -KNKISVGLDVRDKM----------IALKGWKDQTEISCFDFLETIKNLPLKSIIFTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG++ G +++ K+ E ++P+ ASGG +++ + G + + +I+ Sbjct: 170 KDGMKQGINIDDTLKMAESSNIPVTASGGVSSIDDIKLIKSKKKISGVVVGKAIYDGLID 229 Query: 241 IGELKAYLA 249 + EL + A Sbjct: 230 LNELVKFNA 238 >UniRef50_B9KXJ4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=HIS4_THERP Length = 244 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 105/243 (43%), Gaps = 15/243 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+R+G+ V+ + D + +A+R+A GA L D+ + G+ Sbjct: 1 MIVIPAIDLREGRCVRLFRGDFARATVYSDDPIEMAQRWASAGARWLHVVDLDGARLGQP 60 Query: 61 VDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V + RV + D+ V GG+++L+ ++L GA ++ I + AL P ++ R Sbjct: 61 VQHELIERVIRAVPDVAVQVGGGVRTLDAVERLLVGGAARVVIGTAALERPDMLREALAR 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FGV+ +VV +D+ + + V + V V G ++ + Sbjct: 121 FGVERVVVAVDSR----------DGWVATHGWETVQAIRVEEVVHRVVLLGVRRVLATDV 170 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG +LE + ++ V +IASGG G+ R V+ A+ ++ + Sbjct: 171 TRDGTLTRPNLELMGRLA-ALGVTVIASGGVGSRSDLEALARVPGVEAAIVGRALYEGRV 229 Query: 240 NIG 242 Sbjct: 230 RFE 232 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 2/106 (1%) Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC- 200 V + GD +R V + ++ Q GA + + ++ + E +++V Sbjct: 15 VRLFRGDFARATVYSDDPIEMAQRWASAGARWLHVVDLDGARLGQPVQHELIERVIRAVP 74 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 V + GG T+ +E + + ++ + E A Sbjct: 75 DVAVQVGGGVRTL-DAVERLLVGGAARVVIGTAALERPDMLREALA 119 >UniRef50_A8S9L9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9L9_9FIRM Length = 239 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++ P +D+R GQVV+ Q D A+ + GA L D+ + DG + Sbjct: 1 MQLFPAIDLRGGQVVRLTQGDYDRMTVYGQDPCAQARSFVAAGAKNLHVVDLDGAKDGTL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ +A+ + V GGI++ E K LS G + + S A+ D R+ ++ Sbjct: 61 SNYDTIAALAKQGGLYIEVGGGIRTEERIEKYLSLGVGRCILGSVAVTDFAFTARMLQKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I VG+D + Y V+ + + + + + G I+ + Sbjct: 121 GDK-IAVGVDAK----------DGYVAIHGWKEVSAEPGVAFCKRLAEAGCTAIIYTDIA 169 Query: 181 QDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG G +L +++ EV V ASGG + LE + A+ + + Sbjct: 170 CDGAMQGTNLSLYRQLAAEVPGVAFTASGGISSEAELLE-LQQMGTAAAILGKSLYTGAL 228 Query: 240 NIGELKAYLAT 250 ++ + Sbjct: 229 DLARCVQLVQD 239 >UniRef50_C7TCJ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Lactobacillus rhamnosus RepID=C7TCJ1_LACRG Length = 249 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 104/246 (42%), Gaps = 14/246 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++ P +D+ GQ V+ Q ++ D + K G L D+ + + + Sbjct: 1 MQLYPAIDLLAGQSVRLTQGDYRQVSLTADPLTQVKNLTATGLKHLHLVDLDGARSQQPI 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +++ +S + + + GGI++L L+ G D++ + S A+ +P L+T+ +FG Sbjct: 61 NQAVISTIRQHTPAFIELGGGIRTLAIMDHYLNAGIDRLILGSVAVTNPELVTQAVQKFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 I VGID + + +Q + +RG ++ + + Sbjct: 121 ADKIAVGIDARA----------GKVATDGWLTTSTQSPTHLMQAMVRRGVTTFIVTDIGR 170 Query: 182 DGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG+ G ++ L + + V +V ++ASGG T+ A + A + A+ + Sbjct: 171 DGMMKGPNVALLAMLHQTVPNVNIVASGGVHTLADL-TALQTAGIQAAVIGKAWQTGSFP 229 Query: 241 IGELKA 246 + +LK Sbjct: 230 LNKLKE 235 >UniRef50_B0T799 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Caulobacter RepID=HIS4_CAUSK Length = 241 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D++DGQ V+ + + A+R+ +G L D+ + +G+ Sbjct: 1 MILYPAIDLKDGQCVRLLHGDMEKATVFNNSPADQAERFVRDGFSWLHVVDLNGAIEGKS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + V + E I IP + GGI++LE + G ++ + + A+ DP L+ + A + Sbjct: 61 VNTAAVQSILESISIPVQLGGGIRTLEGVEAWIEAGVSRVILGTVAVHDPDLVRKAARLW 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q V D GK V+ +TG ++ + + + + G +++ ++ Sbjct: 121 PEQIAVA-----VDVRDGKVAVDGWTG------LSDLDAITLGKRFEDVGVAALIVTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD--GALAASVFHKQI 238 +DG G ++E + ++ + +P+IASGG ++ V+ GA+ + Sbjct: 170 RDGALTGVNVEGVGELADAVSIPVIASGGVASVADIERLKARPGVEIAGAILGRSLYAGT 229 Query: 239 INIGELKAYLAT 250 I E A Sbjct: 230 IRPAEALTIAAA 241 >UniRef50_A2C1S3 Imidazole glycerol-phosphate synthase n=1 Tax=Prochlorococcus marinus str. NATL1A RepID=A2C1S3_PROM1 Length = 248 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 71/247 (28%), Positives = 130/247 (52%), Gaps = 6/247 (2%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 RII LDV++ V+KG+ +GD LA Y ++G +E+VF D AS R Sbjct: 1 MRIIGRLDVKNNHVIKGIHLEGLRKVGDPQELAVEYYKQGIEEIVFMDAVASLYNRNNLF 60 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + E + +P + GG++SL+D +K L+ GADK+ IN+ + L +A ++G Q Sbjct: 61 HIIQKACEKVFVPIALGGGLRSLDDVSKALNAGADKVVINTALVNRIDLAKEIAQKYGSQ 120 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 C+V I+ + ++ + +V+ + T+ +DW ++++ G GEI+L ++Q+G Sbjct: 121 CLVGSIEAKRENDSWRVYVD------NGREPTKHNVVDWAIKLKEAGVGEILLTSIDQEG 174 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 G+D+E +K++ E P+IASGG G +H + + + A H + + Sbjct: 175 TSKGFDIELIKQINESIRCPIIASGGYGNKKHLADLLKIVEPSAIAIAGSLHYKKDTVSS 234 Query: 244 LKAYLAT 250 +K + + Sbjct: 235 IKQEINS 241 >UniRef50_A7H5V3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=16 Tax=Campylobacter RepID=HIS4_CAMJD Length = 244 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 105/251 (41%), Gaps = 13/251 (5%) Query: 5 RIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +IIP LD+ DG+VV+ V+ + + K Y + GA EL D+T + D Sbjct: 3 QIIPALDLIDGEVVRLVKGDYKQKKVYKYNPLKKFKEYEKAGAKELHLVDLTGAKDPSKR 62 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + ++A+ + + V GGI+S E+ +L G ++ I S A+ D TL + +FG Sbjct: 63 QLVLIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKKFG 122 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + IV+ +DT + + + + ++ + +G I+ +++ Sbjct: 123 SEAIVLALDTILKED-------YVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISK 175 Query: 182 DGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG G ++ K + E + + ASGG +++ G + + + Sbjct: 176 DGTMQGVNVRLYKLIHEIFPKICIQASGGVASLKDLENL--KGICSGVIVGKALLDGVFS 233 Query: 241 IGELKAYLATQ 251 + E L Sbjct: 234 VEEGIRCLQNA 244 >UniRef50_Q88UE2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Lactobacillus RepID=HIS4_LACPL Length = 241 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 16/247 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + I P +D+R GQ V+ Q + I D V A++ G +L D+ + G Sbjct: 1 MQM-IFPAIDLRAGQSVRLYQGDFKQATLINPDPVVQAQQINAAGLQQLHMVDLDGAKSG 59 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R + + ++ + + + GGI++ E A + L G D++ + S AL DP L+ RL Sbjct: 60 RPENFATITAIRQAFTGTIELGGGIRTYELATRYLELGIDRLILGSVALTDPRLVKRLLS 119 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 FG + IV+G+D N Y + +Q + ++ + GA ++ Sbjct: 120 EFGGERIVIGLD----------GTNGYVAIKGWLEQSQTKMSTLMKTMTTSGAKHFIVTD 169 Query: 179 MNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + +DG G +L +++ +V LIASGG + + + + + + Sbjct: 170 VARDGTMQGPNLALYQELQAQVPTANLIASGGVRNLTDV-QVLQASGFKDVIIGKALAEG 228 Query: 238 IINIGEL 244 + + EL Sbjct: 229 GVTLAEL 235 >UniRef50_C0QWR6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=12 Tax=Bacteria RepID=HIS4_BRAHW Length = 238 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 114/250 (45%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+++G+VV+ V+ D + + + E G+ L D+ +SDG Sbjct: 1 MYILPAIDLKNGEVVRLVEGNYDNKTTYFKDPLEVLDFFIESGSSYLHVVDLDGASDGET 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + +V + D+ V GGI++ + K L G + + + A+ + + +++ Sbjct: 61 INFKTIEKVIKKCDLFVEVGGGIRNEDTIKKYLDIGVKRTILGTAAVENIDFTNNMINKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I V ID+ + + + +++++ ++ G I+ ++ Sbjct: 121 -KEHIAVSIDSRDRM----------IAVKGWKEINKQDSVEFCMKLDSMGIDTIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G +L+ K++RE +IASGG T E + RD ++GA+ ++ I+ Sbjct: 170 KDGKLSGTNLDIYKELREKISCNIIASGGV-TFEDEIIKLRDMKINGAIVGKAIYEGKID 228 Query: 241 IGELKAYLAT 250 + ++ Sbjct: 229 LKKIIEIAKQ 238 >UniRef50_A1ZT22 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZT22_9SPHI Length = 239 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 98/239 (41%), Gaps = 15/239 (6%) Query: 14 DGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVA 70 +GQ V+ Q D + +A++YA+EG L D+ + G + V ++A Sbjct: 12 NGQCVRLTQGDYSQKRVYDKDPIEMAQKYADEGFQRLHVVDLDGAKSGAPKHLALVEQMA 71 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 ++ GGIK+ E +L GA +I S A+ P + FG I++ D Sbjct: 72 AKTNLTIDYGGGIKTTEQVQAVLDAGAAMANIGSLAVKQPEVFKGWLQTFGSDKILLASD 131 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 + + ++ D++ + G + +++DG+ G L Sbjct: 132 VKGEK----------IAINAWQDESEVSIYDFIADFIPSGLTQFFCTDVSKDGLLQGVAL 181 Query: 191 EQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 E K++ + + +IASGG +M+ + +DG + ++ I + ELK + Sbjct: 182 ELYCKLKQKFPTMTIIASGGVASMQDIED-LNKEGIDGVIVGKAIYENRIALEELKQFA 239 >UniRef50_D1BQK4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Firmicutes RepID=D1BQK4_VEIPT Length = 240 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 15/250 (6%) Query: 6 IIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 I P +D++DG+ V+ + I D V AK+Y L D+ + G+ V+ Sbjct: 2 IFPAIDLQDGRSVRLYKGDFAQETVINPDPVDQAKQYEAAKVGALHLVDLDGAKAGKPVN 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V V + GGI+ E LS G D++ + S AL +P L ++ +G Sbjct: 62 VDIVKAVRAAFTGILEIGGGIRDKEAVDLYLSLGVDRVILGSVALKNPKLTKQVIAEYGA 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + IV+G+D N E + D + + + GA ++ +++D Sbjct: 122 EHIVIGVDGK----------NGKVAAEGWLDQSDVPMTDLIGAMIEGGAKYFIVTDVDRD 171 Query: 183 GVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G + E L + +E ++ASGG +E ++ V ++ ++ I + Sbjct: 172 GTMQGANEELLGNLQKEFPTARIVASGGVRNLEDI-KSLEQKGVMDSIVGKALYEGTITL 230 Query: 242 GELKAYLATQ 251 E+ Y + Sbjct: 231 EEIGEYNQQK 240 >UniRef50_B4W8G6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=B4W8G6_9CAUL Length = 243 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 101/250 (40%), Gaps = 11/250 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++DG V+ + + +A EGA+ + D+ + G Sbjct: 1 MLIYPAIDLKDGVCVRLMHGKFDQVTRYDEQPATRLSAFAAEGAEWIHVVDLDGAEAGEA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V + + + + ID+ GG++S D AK+L G ++ + S A+ P + F Sbjct: 61 VQHALIGELTKAIDVKIQSGGGVRSANDVAKLLDTGVSRVVVGSLAVTQPNDVAAWLKGF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I + D + + + T+ + + + K +++ + Sbjct: 121 GAEHITLAFDVKIEDGVPVPALKGW------TQSSGVDLWTALDRYPKGLFKHLLVTDVG 174 Query: 181 QDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +LE L ++ R + L ASGG +++ A + +GA+ ++ Sbjct: 175 RDGAMTGPNLELLAEIRRRRPDLVLQASGGVSSLDDI-AAVKSLGCNGAIVGRALYENRF 233 Query: 240 NIGELKAYLA 249 + + A A Sbjct: 234 TLPDAIATAA 243 >UniRef50_Q7MPK7 Putative imidazole glycerol phosphate synthase subunit hisF3 n=18 Tax=cellular organisms RepID=HIS63_VIBVY Length = 260 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 86/237 (36%), Positives = 136/237 (57%), Gaps = 4/237 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IP L +R+ +VK V+F+ + +GD + K + E+ ADEL DI AS G Sbjct: 6 MLRSRVIPVLLMREKGLVKTVKFKEGKYVGDPLNAVKIFNEQEADELTLLDIDASRLGHE 65 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + R+A +P C GGIK++E A +IL G +K+S++S +P +IT+LA+R Sbjct: 66 PDYVLIERIASECRMPLCYGGGIKTVEQAERILKLGVEKVSLSSAVFENPKIITQLAERV 125 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q IVV +D K+ G + ++ +T+++V+++Q GAGEIVLN ++ Sbjct: 126 GRQSIVVCLDVKKRLFGSKFDCFTINGTKKQS----VDTIEFVKQIQTLGAGEIVLNFID 181 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 DGV GYDL+ + K + + VPL GGAG ++ + + + GA A S+F + Sbjct: 182 NDGVMKGYDLDAVSKFKALVKVPLTVVGGAGCVDDIAKLVQQEKLVGAAAGSLFVFK 238 >UniRef50_P33734 Cyclase n=51 Tax=cellular organisms RepID=HIS5_YEAST Length = 552 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 89/314 (28%), Positives = 141/314 (44%), Gaps = 58/314 (18%) Query: 2 LAKRIIPCLDVR-----DGQVVKGVQ--------FRNHEIIGDIVPLAKRYAEEGADELV 48 L +RII CLDVR D V KG Q + +G V LA++Y ++GADE+ Sbjct: 236 LTRRIIACLDVRTNDQGDLVVTKGDQYDVREKSDGKGVRNLGKPVQLAQKYYQQGADEVT 295 Query: 49 FYDITASSDGRVVD---KSWVSRVAEVIDIPFCVAGGIKS-----------LEDAAKILS 94 F +IT+ D + D + + A+ + +P V GGIK LE A+ Sbjct: 296 FLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFR 355 Query: 95 FGADKISINSPALADPTL-------------ITRLADRFGVQCIVVGIDTWYD------- 134 GADK+SI + A+ I ++ +G Q +V+ +D Sbjct: 356 SGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQAD 415 Query: 135 -----------AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 G+ + + + + + GAGEI+LN +++DG Sbjct: 416 TKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDG 475 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +GYDLE ++ V++ +P+IAS GAG EHF EAF D L A +FH+ + + Sbjct: 476 SNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVND 535 Query: 244 LKAYLATQGVEIRI 257 +K YL G+++R+ Sbjct: 536 VKEYLLEHGLKVRM 549 >UniRef50_C1CY68 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Deinococci RepID=C1CY68_DEIDV Length = 251 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 101/244 (41%), Gaps = 15/244 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIPC+D++ G+ V+ + + A+ + E GA + D+ A+ GR + Sbjct: 19 IIPCVDIQSGRAVRLYEGDPERETVYFDSPLDAARHWVERGAGLVHLVDLDAA-TGRGEN 77 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + ++ + +P V GGI+ E A +L G ++ I + A+ +P L+ L G Sbjct: 78 REVIRQITSELGVPVEVGGGIRDREAAEDLLRAGVHRVVIGTAAVRNPQLVADLIAAHGP 137 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + +VV +D + + + + G ++ + +D Sbjct: 138 ERVVVSLDAR----------GLEVATHGWAQGSGVNVAELTPGLADAGLELLIFTDVTRD 187 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G G + E +++VR++ LI GG M+ ++ ++GA+ ++ + Sbjct: 188 GTLKGLNRELMRQVRQLWINTLIVGGGVANMDDV-RLLQEERIEGAIVGRAIYEGTLAYP 246 Query: 243 ELKA 246 + Sbjct: 247 VILE 250 >UniRef50_C7H029 Imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H029_9FIRM Length = 250 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 100/254 (39%), Positives = 151/254 (59%), Gaps = 6/254 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 + K I+PC+D+R G+VVKG++F + + D V LAK Y GAD LVFYDI AS + + + Sbjct: 1 MKKLIMPCMDIRHGKVVKGIKFEGVKDVADPVELAKYYDATGADILVFYDIAASVEDKQI 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + V V D+P GG+K++ED I+ GAD +SIN+ A+ +P L+ A++ G Sbjct: 61 YEGLFKSVRAVSDLPLVAGGGLKTIEDVDNIIKLGADMVSINTGAIDNPDLLNEAAEKIG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + +++ +D K + + + T + L+W+ E RGAG +VLN ++ Sbjct: 121 SENVILSVDAK------KVNGEYHVFRNAGMMDTGLDALEWISEGYDRGAGILVLNSIDT 174 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DGV+ GYD+E LK EV ++ASGGAG M+ F EA V+ ALAASVFH + I I Sbjct: 175 DGVKAGYDIEMLKAAGEVTDAKIVASGGAGKMQDFKEALMLPKVEVALAASVFHYKEIVI 234 Query: 242 GELKAYLATQGVEI 255 +LK YL +G+++ Sbjct: 235 DDLKEYLRKEGIDV 248 >UniRef50_C1TLB3 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLB3_9BACT Length = 239 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 18/249 (7%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M I P +D+ +VV+ + D V A +AE GA + D+ + Sbjct: 1 MKKIEIYPAIDLYSRKVVRLTGGDFEKIKEYGDDPVETALSFAEAGARWIHLIDLEGAEK 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G V + +VA +P GG+++ ED A LS GA ++ + S L Sbjct: 61 GSPVHLKELEKVAASTGLPVQYGGGLRTEEDVALALSSGAKRVYLGSLLFKGSP--RTLW 118 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 RFG IV +D N T VTQ + + E+ + G ++ Sbjct: 119 KRFGNS-IVPSVDVK----------NGTVALSGWTEVTQLPPEEAITELLRIGYSTFLVT 167 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +++DG +G DL+ +++++ ++A+GG + + + V GA+ ++ Sbjct: 168 SVSRDGTASGPDLKLYERLKK-TDGRILAAGGIRDKKDLAD-LAEIGVSGAVLGKSIYEG 225 Query: 238 IINIGELKA 246 +++ E Sbjct: 226 TVDLREAVE 234 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 35/116 (30%), Gaps = 3/116 (2%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW 65 I+P +DV++G V + G + ++ D Sbjct: 125 IVPSVDVKNGTV--ALSGWTEVTQLPPEEAITELLRIGYSTFLVTSVSRDGTASGPDLKL 182 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 R+ + D AGGI+ +D A + G + + + FG Sbjct: 183 YERLKK-TDGRILAAGGIRDKKDLADLAEIGVSGAVLGKSIYEGTVDLREAVEEFG 237 >UniRef50_Q7N8D1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2 n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=HIS42_PHOLL Length = 258 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 103/256 (40%), Gaps = 20/256 (7%) Query: 3 AKRIIPCLDVRDGQV------VKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDIT 53 I P +D+ DG ++ + + +G +A + GA + D+ Sbjct: 6 TFEIFPSVDIVDGIAMTSNSAIRLTRGESSTLRRPLGTPAEVALAWQNAGAKWIHVVDLD 65 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A+ GR + ++ V +DI V GGI+ K+L+ G ++++ + AL +P Sbjct: 66 AA-SGRGSNSHLIADVLAAVDINVQVCGGIRDETILRKVLATGCQRVNLGTAALENPDWC 124 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + +G + I + +D +E + + + + D ++ + K+G Sbjct: 125 AQAIAEYGDK-IAIALDVKSTSEGYQLATHGWNVSKG-------NLWDLLERLDKQGCQR 176 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAA 231 V+ + + G+ + + L++V P+IA GG +++ V+GA+ Sbjct: 177 YVVTDVERGGMMSSPNFTLLQEVCAKTSSPVIAGGGVSSLDDLRALADLSTIGVEGAILG 236 Query: 232 SVFHKQIINIGELKAY 247 H + + + A Sbjct: 237 QALHIGKVPLEDALAA 252 >UniRef50_Q5WX95 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Legionella pneumophila RepID=HIS4_LEGPL Length = 239 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 102/246 (41%), Gaps = 12/246 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGD---IVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ Q R ++ + A +A+ GA L D+ + G++ Sbjct: 1 MLVIPAIDLQSGRCVRLKQGRFDQVTQFSVFPIERALHFAKLGAKRLHVVDLDGARSGKM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + I GGI+S+E A + + G ++ I S A+ +P L ++ ++ Sbjct: 61 QQLELICSM-QKTGIAIQAGGGIRSIEQALECSNAGISQLVIGSLAITNPDLTIQIIEKI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + IV+ +D D + +N + + + V + G I+ + Sbjct: 120 KPENIVLALDVRVDTKVPLLAINGW------QNNSTSSLWEVVSYYENHGIKHILCTDIA 173 Query: 181 QDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG+ NG + + ++ E + ASGG M+ + + + ++ + Sbjct: 174 CDGMMNGPNFDLYQQAVEYFPQIAWQASGGIRHMQDI-TTLGSLGISAVILGLMLYQDNV 232 Query: 240 NIGELK 245 N EL Sbjct: 233 NFEELL 238 >UniRef50_C4G189 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G189_ABIDE Length = 238 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 113/250 (45%), Gaps = 15/250 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M A I P +D+ +G+VV+ ++ ++ ++V A G + L D+ + + Sbjct: 1 MAAMIIFPAIDIYEGKVVRLLKGDYNKMTIYSENVVDKACEIEAAGGEWLHLVDLEGAKE 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G + ++V + + + + GGI++ K ++ G ++I + + A D + ++ Sbjct: 61 GNTPNFTYVEEICKKTGLKVEIGGGIRTEATIEKYINAGVNRIILGTKAATDKEFLNKMT 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 D++ + I VGID + + VT D+V E+++ G I++ Sbjct: 121 DKY-REKIAVGIDVKDEK----------VAIKGWLEVTDKTIFDFVTELKEIGIKNIIVT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + +DG +G ++ +K+ + + + ASGG T++ + ++ + GA+ + Sbjct: 170 DIAKDGAMSGINVSFYEKLSKFTDMDITASGGVTTLDDLIR-LKNTGIYGAILGKAMYTG 228 Query: 238 IINIGELKAY 247 +++ E Sbjct: 229 NVDLREALKI 238 >UniRef50_C5E2I9 KLTH0H05368p n=17 Tax=cellular organisms RepID=C5E2I9_LACTC Length = 550 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 91/314 (28%), Positives = 139/314 (44%), Gaps = 58/314 (18%) Query: 2 LAKRIIPCLDVR-----DGQVVKGVQ--------FRNHEIIGDIVPLAKRYAEEGADELV 48 L +RII CLDVR D V KG Q N +G V LA++Y E+GADE+ Sbjct: 234 LTRRIIACLDVRTNDQGDLVVTKGDQYDVREKQEGGNVRNLGKPVELAQKYYEQGADEVT 293 Query: 49 FYDITASSDGRVVD---KSWVSRVAEVIDIPFCVAGGIKSLED-----------AAKILS 94 F +IT+ D + D + + A+ + +P V GGIK + D AA + Sbjct: 294 FLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTHIPALQVAALYFA 353 Query: 95 FGADKISINSPALADPTL-------------ITRLADRFGVQCIVVGIDTWYDAETGKYH 141 GADK+SI S A+ I ++ +G Q +V+ +D G Sbjct: 354 SGADKVSIGSDAVYAAEKYYELGERGDGASPIETISKSYGAQAVVISVDPKRVYVDGPES 413 Query: 142 VN--------------QYTG----DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 V + + + + + GAGE++LN +++DG Sbjct: 414 VKHKTFETKFPNEKGQTWCWYQCTIKGGRESRDMGVWELTRACEALGAGEVLLNCIDKDG 473 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +GYDLE + +E +P+IAS GAG +HF EAF D L A +FH+ + + Sbjct: 474 SNSGYDLELINHAKEAVKIPVIASSGAGEPKHFKEAFESTGADACLGAGMFHRGEYTVND 533 Query: 244 LKAYLATQGVEIRI 257 +K YL G ++R+ Sbjct: 534 VKQYLLDSGFKVRM 547 >UniRef50_D0CY30 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 2 n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CY30_9RHOB Length = 282 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 104/255 (40%), Gaps = 15/255 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 R+ P +++++G+ V + R E + D V A+ +A GA+ + D + +GR Sbjct: 36 MRVYPTMELQNGRCVTLDKGRLDEPMIWHVDPVETAQGWAAAGAEWMHLTDFD-AIEGRD 94 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V ++ ++P +AGG +S E + + GA +I I + A DP L LA + Sbjct: 95 TNSALVEQIIRSAELPVQLAGGFRSREQVERWIDKGAGRIVIGTLAARDPHLFKELAKLY 154 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q IV+ +D Y + + + +++ I++ ++ Sbjct: 155 PDQ-IVLAVDV----------WQGYVMTDGWRTQSAFSPEAFIEAFADAPLAAILVTDID 203 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 D V L + + P+IASG + + ++ G L ++ ++ Sbjct: 204 SDMVDVEAQLGLISGLAAHSRTPVIASGVVRSSDDISRLAYIPNISGVLVGRALFRKTVD 263 Query: 241 IGELKAYLATQGVEI 255 + E A T + Sbjct: 264 LSEALAVARTAHEPV 278 >UniRef50_C7GBG4 Imidazoleglycerol phosphate synthase, cyclase subunit n=2 Tax=Roseburia RepID=C7GBG4_9FIRM Length = 252 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 92/258 (35%), Positives = 133/258 (51%), Gaps = 6/258 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IP L + +VKGV F + + ++P K Y DEL+ DI A+++ R Sbjct: 1 MLKVRVIPTLLYKSVGLVKGVGFNSWRRVDTVLPAIKVYNMREVDELILLDIEATNEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + + +PFCV GGI ++ +L GADK++INS A + +LIT A F Sbjct: 61 PDYDEIRDFSRECFVPFCVGGGICHIDQIKNLLRAGADKVAINSAAYDNLSLITEGAKLF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIV ID K + + + T W DW+ +V + GAGEI+L + Sbjct: 121 GSQCIVASIDCR------KIDGEYHCFSHNGSVDTGWLLQDWIIKVVEAGAGEILLTSVE 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG GYD+E +K + +VP+IASGGAG EH +A ++ AAS++H Sbjct: 175 LDGTMEGYDVEMIKIATSLVNVPVIASGGAGNYEHMRKAVQEGGASAVAAASIYHFTEQT 234 Query: 241 IGELKAYLATQGVEIRIC 258 E K YL GV +R+ Sbjct: 235 PKEAKEYLGEHGVAVRMI 252 >UniRef50_A6C5Q1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Planctomycetaceae RepID=A6C5Q1_9PLAN Length = 246 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 104/255 (40%), Gaps = 21/255 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+R G+ V+ Q D +A+R+A+ GA L D+ + G+ Sbjct: 1 MEILPAIDIRGGKCVRLRQGDYGQETVFGDDPTEMARRWADGGAQRLHLVDLDGAKAGQP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADR 119 V+ V ++ E + +P + GGI+ +L G D++ + + AL DP ++ R Sbjct: 61 VNHEVVRKIVEAVSVPCQMGGGIRDEASIQLMLDEVGIDRVIVGTQALKDPQWFKQMVQR 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 + + + +G+D + E V++ +D +E ++ + Sbjct: 121 YPNR-LALGLDAR----------DSKVATEGWLDVSETSAIDLAKEYVGVELAAVIYTNI 169 Query: 180 NQDGVRNGYDLEQLKKVREVC--HVPLIASGGAGTMEHFLEAFR----DADVDGALAASV 233 DG+ G D ++ + + +P+IASGG T++ + GA+ Sbjct: 170 ANDGMMQGVDEGTIQDMIALAELGLPVIASGGVTTLKDVSRLAEVSRTQPKLVGAIIGRA 229 Query: 234 FHKQIINIGELKAYL 248 ++ I + Sbjct: 230 LYEGTIEVPAAIEAA 244 >UniRef50_B2I5X7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=21 Tax=Bacteria RepID=HIS4_XYLF2 Length = 269 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 10/250 (4%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + + P LD+R+G VV+ Q ++P A+ +A+ GA + D+ A+ G Sbjct: 1 MNFIVYPALDIRNGAVVRLQQGDYARQTRYDDQVLPRAQAFADSGATWMHLVDLDAAKAG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + ++ + GG++S +D A+IL GA ++ I S A+ T + Sbjct: 61 GYTLAPLLRQITRATGLQVQTGGGVRSRDDVARILDAGAARVVIGSLAVRQMTCVIEWLQ 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 FG + I V +DT DA T V + Q+ G ++ Sbjct: 121 AFGPERITVALDTRQDAGGVW-----RLPVHGWTEVAEATLEALAQQYAAAGLRHLLCTD 175 Query: 179 MNQDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + +DG+ +G +++ +R + V + SGGA + + A + A G + + Sbjct: 176 IARDGMLSGPNMDVYAYLRALVPAVQIQVSGGARDVADVVAA-KMAGCAGIVLGKALLEG 234 Query: 238 IINIGELKAY 247 + + E + Sbjct: 235 RLALKEAVQH 244 >UniRef50_B1YL10 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YL10_EXIS2 Length = 234 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 109/247 (44%), Gaps = 15/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++ P +D+ GQ V+ Q GD + +A+R+ E+GA + D+ + G + Sbjct: 1 MQLYPAIDLMSGQAVRLKQGDFQQQTFFGDALTIARRFKEDGATAIHLIDLDGAKAGEPL 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 S ++ + + + GG++++E + G D+I I + AL D L+ ++ +R G Sbjct: 61 HLSLIADIKKETGLFVEAGGGVRNIETVEAYVGAGIDRILIGTVALEDEALLEQMIERAG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + V +D + + W ++ + ++G + +++ Sbjct: 121 DK-LAVALDAK----------DGIVQTRGWLEASDWTLERAIEHLIQKGIKTFLYTDISR 169 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG+ G D++ L + + V LIASGG T+E ++ +DGA+ +++ Sbjct: 170 DGMMQGPDVDGL-DLLKRDGVELIASGGVTTVEDVAR-LKEIGMDGAVIGRALLDGSLSL 227 Query: 242 GELKAYL 248 E+ Sbjct: 228 KEVLRVC 234 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 38/94 (40%), Gaps = 1/94 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + L + ++ GA I L ++ L + +++ + + A GG +E + Sbjct: 30 DALTIARRFKEDGATAIHLIDLDGAKAGEPLHLSLIADIKKETGLFVEAGGGVRNIE-TV 88 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 EA+ A +D L +V + + ++ + Sbjct: 89 EAYVGAGIDRILIGTVALEDEALLEQMIERAGDK 122 >UniRef50_Q3ICF4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Alteromonadales RepID=HIS4_PSEHT Length = 242 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 99/245 (40%), Gaps = 11/245 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPL---AKRYAEEGADELVFYDITASSDGRVVD 62 IIP LDV Q+V+ Q + + L K YA+ GA +L D+ + D Sbjct: 2 IIPALDVLQNQIVRLYQGKYETVQFYPFELGARLKEYADSGAGKLHLVDLEGARDPSKKQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + +++P+ V GGI+ +D + L GA+++ I S A+ + ++FG Sbjct: 62 WQHIQAATKALNVPYQVGGGIRCEQDVSDWLKAGANQVVIGSMAVEKREQVKAWIEQFGA 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + V+ +D A +++ L+ V G + + +++D Sbjct: 122 EHFVIALDVNKTATGWAPA------THGWLTESEFGLLELVDFYANLGVIDFLCTDISKD 175 Query: 183 GVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G + + + + + ASGG +++ + ++ + G + ++ Sbjct: 176 GTMTGPSFALYEDLIKHNSTIKVQASGGVSSLDDIKK-LKELGIGGIILGKSLLDGAFSV 234 Query: 242 GELKA 246 E A Sbjct: 235 EEALA 239 >UniRef50_C8WPG6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Coriobacteriaceae RepID=C8WPG6_EGGLE Length = 257 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 100/249 (40%), Gaps = 15/249 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++P +D+ G+ V+ + D A+ + E+GA L D+ + G Sbjct: 1 MYLLPAIDILGGKAVRLAKGDYDRVTVYHDDPAAQAQLFEEQGATWLHVVDLDGARSGIP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V R+ + V GG++SL+ A++ G ++ + + +ADP ++ Sbjct: 61 ENIAIVERIMRKTLLKVEVGGGVRSLDTIARLADAGVSRVVLGTSLVADPDFAEAAIAQY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G DA+ G+ V + + +++ G +V + Sbjct: 121 GKLLCAG-----IDAKGGEVAVAGW------REGAGVAAEELARDMSALGFRHLVYTDIA 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD-VDGALAASVFHKQII 239 +DG++ G + ++ E P+IASGG ++ + A ++G +A ++ + Sbjct: 170 RDGMQTGIEAAAYVRMAEAFGHPVIASGGVAGVDDIVRLGEVAGSIEGVIAGRAVYEGAL 229 Query: 240 NIGELKAYL 248 ++ E Sbjct: 230 SVQEGVRAC 238 >UniRef50_Q1IWD2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Deinococcus RepID=HIS4_DEIGD Length = 243 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 100/241 (41%), Gaps = 15/241 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 L IIPC+D++ G+ V+ + + A+ +A GA + D+ A+ G Sbjct: 8 LQPLIIPCVDIQSGRAVRLYEGDPDRETVYFESPLEAARHWAALGAGLVHLVDLDAA-TG 66 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R +++ ++++ + +P V GGI+ A +L G ++ I + A+ +P L+ L Sbjct: 67 RGENRAVITQITAELGVPVEVGGGIRDRAAAEALLDAGVGRVVIGTAAVKNPALVRELIA 126 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 G +VV +D + + + + G ++ Sbjct: 127 AHGPSRVVVSLDAR----------GLDVAIHGWAEGSGVSVAELAPLLAEAGLETLIFTD 176 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + +DG G D + +++VR++ LI GG T++ + + GA+ ++ Sbjct: 177 VTRDGTLRGLDRDLMRQVRQLWSNTLIVGGGVATLDDV-RLLAEEGIQGAIVGRAIYEGT 235 Query: 239 I 239 + Sbjct: 236 L 236 Score = 47.2 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 11/126 (8%) Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC 200 V Y GD R V L+ + GAG + L ++ G + + ++ Sbjct: 23 AVRLYEGDPDRETVYFESPLEAARHWAALGAGLVHLVDLDA-ATGRGENRAVITQITAEL 81 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY---------LATQ 251 VP+ GG EA DA V + + K + EL A L + Sbjct: 82 GVPVEVGGGIRDRA-AAEALLDAGVGRVVIGTAAVKNPALVRELIAAHGPSRVVVSLDAR 140 Query: 252 GVEIRI 257 G+++ I Sbjct: 141 GLDVAI 146 >UniRef50_B0SDS6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Leptospira biflexa serovar Patoc RepID=HIS4_LEPBA Length = 247 Score = 196 bits (498), Expect = 7e-49, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 108/254 (42%), Gaps = 16/254 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++P +D+ D + V+ +Q + + + E+GA + D+ A+ G+ Sbjct: 1 MLVLPAIDLLDNEAVRLLQGDYSKKTVYSSSPEKMIQVFEEQGATLIHIVDLNAAKTGKS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + ++ E + + GGI+++++ G ++ + + A+ +P ++ + F Sbjct: 61 ENEKTIKKIKEKCTVDLELGGGIRTIDNMKFYDGLGVSRLILGTVAVEEPNVVEKAVSLF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IV+G+D N Y + + D++ + G ++ + Sbjct: 121 GQDRIVIGVDAK----------NGYVRTKGWESNSGILYKDFLTTMYGMGIRHVIFTDIA 170 Query: 181 QDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDAD--VDGALAASVFHKQ 237 +DG+ G + ++ E + L+ASGG + E +E + + + GA+ ++ Sbjct: 171 RDGMMEGPNTLAYAELLETFPDLQLVASGGVSSKEDLVELYDKTNGKLFGAITGKAIYEG 230 Query: 238 IINIGELKAYLATQ 251 +++ E L + Sbjct: 231 KLDLKESIRILNQK 244 >UniRef50_Q5NMD5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Zymomonas mobilis RepID=HIS4_ZYMMO Length = 250 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 97/252 (38%), Gaps = 16/252 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 I P +D+++G VV+ + D A+++ E GA L D+ + G ++ Sbjct: 7 IFPAIDLKEGHVVRLSEGDMDRATIYDDDPAARARQFYEAGARYLHVVDLDGAFAGHAMN 66 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + V + + + GGI+ + LS G ++ I + A +P L+ A ++ Sbjct: 67 AAAVDAIVKAFPGTIELGGGIRDMNAIDGWLSRGISRVVIGTAAFENPDLVKEAAQKYPG 126 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 Q IVV +D + + ++ D + G ++ + +D Sbjct: 127 Q-IVVAVDAR----------DGMVTTKGWAEQSEISVTDMAERFADAGVVALLYTDVGRD 175 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHKQIIN 240 G++ G + E + +P+IASGG + R ++G + + ++ Sbjct: 176 GLKKGCNSEATLALAAATDIPVIASGGVKDIGDIELLARHTKDGIEGVICGRAIYDGSLD 235 Query: 241 IGELKAYLATQG 252 + A G Sbjct: 236 LKAALAIARQGG 247 >UniRef50_Q056S8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Leptospira RepID=HIS4_LEPBL Length = 241 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 103/251 (41%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+ D V+ + E + LA+ +A+ GA L D+ + + Sbjct: 1 MIIIPAIDLFDNCAVRLFKGNYKEKKIYSSEPWKLAEGFAKNGATLLHLVDLNGARNQLG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +++ + ++ + + + GGI+ E A G D+ + + A+ DP L+ D + Sbjct: 61 INEDSILKIRKTTSLKVQLGGGIRDKEKLAYYDKIGIDRFILGTAAVTDPDLLKFALDNY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + +VV +D ++ + + D + + K G IV + Sbjct: 121 EKERVVVAVD----------AIDGIVKIAGWEKDSGVRYRDLMDRLAKAGIEHIVFTDIA 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE---AFRDADVDGALAASVFHKQ 237 QDG G +L+ +++ +IASGG +++ ++ + G + ++ Sbjct: 171 QDGTLAGPNLKAYQEILNSYPFQVIASGGISSLKDLMDLSSLKTKIPLYGVITGKALYEG 230 Query: 238 IINIGELKAYL 248 +++ + + + Sbjct: 231 KLDLAKAISSI 241 >UniRef50_P59520 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=HIS4_BUCBP Length = 241 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 96/245 (39%), Gaps = 10/245 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP +D+ +G +V+ Q +I +A +Y +GA + D+ + Sbjct: 2 IIPSIDLIEGNIVRLYQGNYDTKTFYQNNIYDIALKYYNQGAKIVHLVDLDGALCPNNKQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 S + + + V GGI+S +D +L GA ++ I S A+ + T + + FG Sbjct: 62 TSLIKNLLNYFNFHIQVGGGIRSYKDVETLLLNGAKRVVIGSSAINNITEVEKWLLEFGY 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + IV+ +D + K V + ++ G ++ + +D Sbjct: 122 KSIVLALDVYVRNNGYKEVV-----INGWKNRSNVSLESVLERFSTLGIKYVLCTDVKKD 176 Query: 183 GVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G + K + ++ +V SGG GT+ + A + + + + + ++ Sbjct: 177 GTCLGPNFTLYKNISKLFKNVCFQLSGGIGTISDVISA-KKSGIKDIIIGRALLENKFSL 235 Query: 242 GELKA 246 E Sbjct: 236 LEAIR 240 >UniRef50_Q7VQW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=117 Tax=Enterobacteriaceae RepID=HIS4_BLOFL Length = 251 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 104/256 (40%), Gaps = 12/256 (4%) Query: 6 IIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 IIP LD+ +G V+ Q + + G+ + Y ++GA + D+ + + + Sbjct: 2 IIPALDIINGDAVRLYQGKYQSQSHYGNPYSILSTYVQQGATMIHLVDLDGARNPKNRQL 61 Query: 64 SWVSRV---AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 S + + A + + GGI+ D +L FG +++ + S A+ P + + F Sbjct: 62 SLIKELTHTAITSHLKIQIGGGIRHATDIKTLLKFGVNRVILGSIAITHPKKVKQWFTYF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 +V+ +D + D++ + V + T + + ++ G ++ ++ Sbjct: 122 NPSSLVLALDIYIDSKNNRKVV-----IHGWQKETNIQLEEVIENYNSVGLKHVLCTDIS 176 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G ++ + + + + ASGG + L+ R + V+ + F ++ Sbjct: 177 KDGTLLGSNINLYQSICYKWPKISFQASGGVAKLTEILQ-LRSSGVNSIIIGRSFLEKKF 235 Query: 240 NIGELKAYLATQGVEI 255 + E + + Sbjct: 236 TLTEAISCWQNASSRV 251 >UniRef50_C4R8P0 Imidazole glycerol phosphate synthase (Glutamine amidotransferase:cyclase) n=8 Tax=Saccharomycetales RepID=C4R8P0_PICPG Length = 561 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 88/313 (28%), Positives = 138/313 (44%), Gaps = 58/313 (18%) Query: 2 LAKRIIPCLDVR-----DGQVVKGVQFR--------NHEIIGDIVPLAKRYAEEGADELV 48 L +RII CLDVR D V KG Q+ + +G V +A++Y ++GADE+ Sbjct: 246 LTRRIIACLDVRTNDSGDLVVTKGDQYDVREKSESGDVRNLGKPVEMAEKYYQQGADEVT 305 Query: 49 FYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLED-----------AAKILS 94 F +IT+ + + R AE + +P V GGIK + D A Sbjct: 306 FLNITSFRNSPIKDAPMLEVLKRAAETVFVPLTVGGGIKDVVDPDGTKVPALKVATLYFR 365 Query: 95 FGADKISINSPALADPTL-------------ITRLADRFGVQCIVVGIDTWY-------- 133 GADK+SI + A+ I ++ +GVQ +V+ +D Sbjct: 366 AGADKVSIGTDAVLAAEEFYRNNEKGTGLTPIETISASYGVQAVVISVDPKRFYVADPSK 425 Query: 134 ----------DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 G+ + + V + +K GAGEI+ N +++DG Sbjct: 426 TPYKTIKTKFPGPNGENYCYYKVTSQGGRNVHDLGAWELCYACEKLGAGEILCNCIDKDG 485 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +GYDLE + ++ +P+IAS GAG HF E FR + D AL A +FH+ + E Sbjct: 486 SNSGYDLELIDYIKSATKLPVIASSGAGNPSHFEEVFRKTETDAALGAGMFHRGEYTVKE 545 Query: 244 LKAYLATQGVEIR 256 +K +L +G+ +R Sbjct: 546 VKDFLTKRGLLVR 558 >UniRef50_D1Y7T0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7T0_9BACT Length = 237 Score = 193 bits (492), Expect = 4e-48, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 99/246 (40%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+ GQ V+ + +A +A +GA +L D+ + +G Sbjct: 1 MLIYPAIDLYAGQAVRLQRGDYARMTVYSDRPETVAADFAAQGARQLHLIDLEGAKNGGT 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + + V GGI+S++ L G D++ + + A R R+ Sbjct: 61 PNLETIVAVKKSSGLFCQVGGGIRSMDAIVAYLDAGVDRVILGTAAATQAHFAARAVARY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I VG+D + + + T + + ++ + +Q G ++ ++ Sbjct: 121 GAR-IAVGVDIK----------DGFAAVKGWTEKSPLKAFEFCRRMQSDGVSTLICTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++ K + + +IASGG +++ + GA+ + + I+ Sbjct: 170 RDGMMQGTNVALYKTLSTELKMRIIASGGVSSLDDVRR-LAALGLYGAIIGKACYTKAIS 228 Query: 241 IGELKA 246 I Sbjct: 229 IAAAIE 234 >UniRef50_A3HVE8 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVE8_9SPHI Length = 244 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 110/252 (43%), Gaps = 13/252 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP + + +G+ V+ + I + + +A+ + G L D+ + G Sbjct: 2 FEVIPSIWLINGKCVRLKRGDFATEEAISNNPLEIAQGFESIGIKRLHLVDLDGARRGEP 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +A ++ GG+ + D K FGA ++I+S A P ++ + Sbjct: 62 KNYHILEAIAGYTNLHVDFTGGVTTDGDVIKSFEFGAKTVTISSAAANYPERFSQFILSY 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I + DT + K + + + T+ + D ++ RG + + + Sbjct: 122 GREKINLAADT--NPADRKIKIRGWL------KKTEIDLYDHIEFFYDRGLKYLKCSDVT 173 Query: 181 QDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DGV G + E V++ ++ + ASGG ++E F E + V+ A+ +++ ++ Sbjct: 174 RDGVMVGPNFELYADLVKKFPNLNIAASGGVRSIEDFKE-LKKLGVNAAVFGRAYYEGML 232 Query: 240 NIGELKAYLATQ 251 + +L +++ + Sbjct: 233 KLEDLADFISEK 244 >UniRef50_Q058A3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=HIS4_BUCCC Length = 245 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 101/251 (40%), Gaps = 13/251 (5%) Query: 6 IIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP LD G++V+ Q DI ++Y +GA + D+ ++ Sbjct: 2 IIPSLDFIHGKIVRLYQGNYNNKISYKKDIFKQIEKYIYQGATYIHLVDLDGCNNPENRQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 KS + + ++ F V GGI+S D + G KI I + A+ P + +G Sbjct: 62 KSMFNIFSNFKNVSFQVGGGIRSKRDIENLFHAGVSKIVIGTSAILYPNKFKKWLKNYGS 121 Query: 123 QCIVVGIDTWYD-AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V+ +D + + K + + T+ D +++ G I+ +++ Sbjct: 122 KNFVLSVDININTKKENKIAIQGWKKT------TEINLDDAIKQFIPYGLKNILCTDISR 175 Query: 182 DGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG +G ++ K ++ + ++ L +SGG ++ + +V+ + + Sbjct: 176 DGTFSGPNISLYKYLKNKFPNIVLQSSGGINSISDIYN-LKKNNVEHVIVGRALLENKFT 234 Query: 241 IGEL-KAYLAT 250 E K +L Sbjct: 235 FLEASKCWLKE 245 >UniRef50_Q12NS9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Gammaproteobacteria RepID=HIS4_SHEDO Length = 250 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 15/250 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP +D+ DGQVV+ Q + + K Y ++GA L D+T + D Sbjct: 2 IIPAIDLIDGQVVRLYQGDYDKQTTFDLSPLAQLKSYQDQGAKLLHIVDLTGAKDPNQRQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 +S + +D+ V GGI+S + ++L+ G ++ I S A+ +P L+ +++G Sbjct: 62 IKLISELVAGLDVDIQVGGGIRSEQQVTELLAIGVKRVVIGSLAVKEPELVKSWLNKYGS 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG-----AGEIVLN 177 I + +D +A K V E ++ G ++ Sbjct: 122 DAICLALDVNINANGEKI-----VAVSGWQSAGGKTLESLVAEFERPGSKQTALKHALVT 176 Query: 178 MMNQDGVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 +++DG G + ++ + ASGG T++ A +D+ G + Sbjct: 177 DISRDGTLTGANTALYTELAAAYPTILWQASGGIATLDDVS-AVKDSKAAGIIIGKALLI 235 Query: 237 QIINIGELKA 246 + E Sbjct: 236 NQFTVEEAIQ 245 >UniRef50_Q1GHT0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1 n=15 Tax=Rhodobacterales RepID=HIS41_SILST Length = 247 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 93/255 (36%), Gaps = 15/255 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +++ DG+ V + + D V AK +AE GA+ + D + G Sbjct: 1 MMIYPTMELLDGRCVTLDKGNLDAPMIWHVDPVETAKGFAEAGAEWMHLTDFN-ALQGDS 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ V + +P + GGI+S E A + G ++ I + A DP + LA + Sbjct: 60 SNQDLVEELIRTAGLPIQLGGGIRSREQAEFWIEKGVGRVVIGTMAAYDPAAVAELAKYY 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q +V+ +D E + W +V+ I++ ++ Sbjct: 120 PDQ-VVLAVDV----------WQGQVMTEGWRKSGAWTPEAFVKAFGNAPFAGILVTDID 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 D L + + E H P+IASG + + ++ GAL + I Sbjct: 169 SDMSDLDAQLGLISGLAEQAHSPVIASGVVRSKDDISRLKYLPNISGALVGRALFNKTIT 228 Query: 241 IGELKAYLATQGVEI 255 + E + Sbjct: 229 LEEAMETAQPNPEPV 243 >UniRef50_A8ZUC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Proteobacteria RepID=HIS4_DESOH Length = 251 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 105/252 (41%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ +Q D +A+R+AE GA+ + D+ + + Sbjct: 1 MMVIPAVDIKGGKCVRLLQGDMNAETVFSDDPGAMAERWAEAGAELIHVVDLDGAIEKSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +S + + +P V GGI+ ++ G +I I S A+ P L+T F Sbjct: 61 RNLKAISALIRRVGVPVQVGGGIREIDTVKMYADLGVARIVIGSAAVNHPDLVTAACREF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + IV+GID + E T T D + G I ++ Sbjct: 121 PGR-IVLGIDAR----------DGRVATEGWTSTTDIAAADLAARFEGCGVAAINFTDIH 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF--RDADVDGALAASVFHKQI 238 +DG+R G ++ ++ +P++ASGG T++ ++ V G + + Sbjct: 170 RDGMRTGPNIPAIEAFARATAIPVVASGGVSTIDDIQALLGIQEFGVTGVITGRALYDGT 229 Query: 239 INIGELKAYLAT 250 +++ E A + Sbjct: 230 LDLAEAIAVASA 241 >UniRef50_A7FU80 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=104 Tax=Bacteria RepID=HIS4_CLOB1 Length = 242 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 121/250 (48%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+++G+ ++ Q + + D + +A ++ E GA+ + D+ + G + Sbjct: 1 MIILPAIDLKEGKCIRLYQGDFKASKVVAEDPIEVALKFKENGAEYIHIVDLDGALTGEI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + S +S + + I+IP + GGI++L ++ G +++ + + AL + L+ ++ Sbjct: 61 KNLSIISSIIKTINIPVELGGGIRNLNTIDMLIGAGIERVILGTAALNNRGLVEEAVKKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I +GID + V+ +D+ +E++K G I+ ++ Sbjct: 121 -DEKIAIGIDAKNEK----------VAINGWLNVSSINYIDFAKEMEKIGVRNIIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G +L+QL+K+ E + +IASGG +E + ++ DV GA+ + IN Sbjct: 170 KDGTLKGPNLKQLEKLNESINCNVIASGGIKDIEDL-KGIKEMDVYGAIVGKAIYSGNIN 228 Query: 241 IGELKAYLAT 250 + E + Sbjct: 229 LNEAIKIINK 238 >UniRef50_B6YWA8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=cellular organisms RepID=HIS4_THEON Length = 229 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 103/248 (41%), Gaps = 22/248 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI--IGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 RI P +D+ G+ V+ + + ++ GD V +A R+ E D++ D+ + G+ Sbjct: 1 MRIYPAIDLMGGKAVRLYRGQKEKVKVYGDPVEIASRFTEL-VDKIHVVDLDGAFTGKPQ 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + V + E + V GG +S E AK GA+ + I + A D + ++ D F Sbjct: 60 NLDVVKEIIEETGLKVQVGGGFRSYESIAKAYEIGAENVIIGTKAF-DLEFLEKITDNFD 118 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + DA GK V + + S E + ++E + + + Sbjct: 119 GITVSL------DARGGKIAVKGWLEESSLKVG---EAYEMLREY----VDRFIYTSIER 165 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG G E +++ + I +GG +++ L+ R GA+ ++ +++ Sbjct: 166 DGTLTGI--ESIERFWK--DEEFIYAGGVSSVDDVLK-LRRVGFSGAIVGKALYESEVSL 220 Query: 242 GELKAYLA 249 EL L Sbjct: 221 KELLEVLE 228 >UniRef50_B1ZW12 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Opitutaceae RepID=HIS4_OPITP Length = 243 Score = 190 bits (483), Expect = 4e-47, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 95/243 (39%), Gaps = 19/243 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++ G+ V+ Q R + + +A ++ G++ + D+ + G Sbjct: 1 MTIYPAIDIKGGRCVRLTQGRAEQETIYAQNPADVAMQFRAAGSEWVHVVDLDGAFAGEP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + + + GG+++ + L+ G ++ + + A + + L F Sbjct: 61 QNLAAVQAIV-AVGMKVQFGGGLRTRAAVERALALGVSRVVLGTRAAESESFVGELVQAF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + V DA+ GK V + TL + + G ++ + Sbjct: 120 GDKIAVG-----IDAKNGKVAVKGWVAT------ADLSTLVLARRMDTLGVATLIHTDIG 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR----DADVDGALAASVFHK 236 DG+ G +L + + +IASGG + + + A++DG + ++ Sbjct: 169 TDGMLTGPNLAAQEALCSAVKSRVIASGGVSRRDDVVNLAKLAQRHANLDGVIVGKALYE 228 Query: 237 QII 239 + + Sbjct: 229 RRV 231 >UniRef50_C8WUX9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WUX9_ALIAD Length = 252 Score = 189 bits (481), Expect = 6e-47, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 109/252 (43%), Gaps = 19/252 (7%) Query: 6 IIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 + P +D+ G+VV+ Q GD +A R + GA L D+ A+ G+ + Sbjct: 8 VYPAIDILGGEVVRLRQGDYQQVTRYDGDPAGVAGRLCDAGARFLHVVDLDAARSGQSDN 67 Query: 63 KSWVSRVAEVI---DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + V + E V GGI++ + A+ L G ++ I + A+ ++ A Sbjct: 68 ERAVRAIVETAASYGAAVQVGGGIRTKDAIARWLEAGVARVVIGT-AVRQVEVVAEWAQE 126 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FG +V G+D T+W D +E+ K G + ++ + Sbjct: 127 FGGHRLVAGLDGRK----------GRLAVSGWLEETEWSIFDLARELAKVGLVQALVTDV 176 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +L+ V+E + IASGG G+++ + A R A + GA+ H I Sbjct: 177 ERDGTGEGPNLDLALGVQE-TGLFAIASGGIGSIDDVV-AVRRAGLAGAVIGKALHDGRI 234 Query: 240 NIGELKAYLATQ 251 ++GEL LA + Sbjct: 235 HLGELFQRLAQE 246 >UniRef50_Q67KH9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Bacteria RepID=HIS4_SYMTH Length = 249 Score = 189 bits (481), Expect = 7e-47, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 20/257 (7%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + + P +D++DGQVV+ Q R E D V +A R+AE GA + D+ + G Sbjct: 1 MRLDLYPAIDLKDGQVVRLRQGRMDEATVYGVDPVRIAARWAEAGARWIHVVDLDGALRG 60 Query: 59 RVVDKSWVSRVAEVI-----DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 R + + V + E + + + GG+++LE L+ G + I + AL + Sbjct: 61 RPQNAAAVRAIVEALRQRHPGVRVQLGGGLRTLEALEAALALGVSRAIIGTSALEG-DVA 119 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 R RFG + V ID + VT+ +D +++ G Sbjct: 120 ARAVARFGPDRVAVSIDAR----------GGFVAARGWVEVTRVRAVDLAVRMREVGVRT 169 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +V + DG+ G + +L+ + + +IASGG ++E V GA+ Sbjct: 170 VVYTDIATDGMLTGPNFAELEMMGR-TGLDVIASGGISSLEDIRRLTEIPGVAGAIIGRA 228 Query: 234 FHKQIINIGELKAYLAT 250 + +++ E + Sbjct: 229 LYTGAVDLAEALSLCGE 245 >UniRef50_Q7MPP3 Putative imidazole glycerol phosphate synthase subunit hisF2 n=1 Tax=Vibrio vulnificus YJ016 RepID=HIS62_VIBVY Length = 272 Score = 189 bits (481), Expect = 8e-47, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 124/257 (48%), Gaps = 6/257 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IPC+ + VV+ F+N+ IG++ + DE++ DI AS + R Sbjct: 4 MLKIRLIPCIVTKGELVVQSFAFKNYLPIGNVKTAIDFFVNWDVDEIIVNDIDASKEFRE 63 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + VS A+ +P V GGIK+LE +L GADK++IN+ A+ DP I A F Sbjct: 64 PNVDLVSWAAKECFVPLTVGGGIKTLEHIRNLLKAGADKVTINTKAIDDPDFIKNAASVF 123 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI V +D K + + V ++ GAGEI+LN ++ Sbjct: 124 GSQCITVSVDAIKQGNVYKLYDYRDGRVLDVDVVDWVRKVE------SYGAGEILLNSVD 177 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG R GYD+E LK V + +P+IA GG G + E + AA++F + Sbjct: 178 RDGSREGYDVELLKTVSGIVSIPVIALGGIGRFDQLAEGAIEGGCQALSAANIFQHMEHS 237 Query: 241 IGELKAYLATQGVEIRI 257 KA + + +R+ Sbjct: 238 TIAAKAQMRNAKLNVRL 254 >UniRef50_C6N0X3 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0X3_9GAMM Length = 240 Score = 189 bits (480), Expect = 8e-47, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 98/246 (39%), Gaps = 12/246 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ Q + +I V A +A+ GA L D+ + G + Sbjct: 1 MILIPAIDIQAGRCVRLKQGQFEQITIFDTPPVERAAYFAKIGAQRLHVVDLDGAQIGSM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + I GGI+SLE A S G + + S A+++ L T++ Sbjct: 61 QQLPLICSM-QNTGINVQAGGGIRSLEQAKLCFSAGIANLVLGSIAISNRELATQIIQEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I++ +D + + + D V Q+ G +I+ + Sbjct: 120 SPKNIILALDIRLINGIPIPATHGWQTM------SNRNLWDVVSYYQQLGIQQILCTDIA 173 Query: 181 QDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG+ G + ++ V+ + ASGG E EA V A+ ++ + Sbjct: 174 CDGMMQGPNFSLYQEAVKRFPMIDWQASGGIRNQEDI-EALDKLGVAAAILGLSLYQGTL 232 Query: 240 NIGELK 245 ++ E K Sbjct: 233 HLAEYK 238 Score = 42.1 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 39/107 (36%), Gaps = 6/107 (5%) Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 ++ K GA + + ++ + + L + + + + + A GG ++E Sbjct: 29 DTPPVERAAYFAKIGAQRLHVVDLDGAQIGSMQQLPLICSM-QNTGINVQAGGGIRSLEQ 87 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV----EIRIC 258 F A + + S+ ++ ++ + + +IR+ Sbjct: 88 AKLCF-SAGIANLVLGSIAISNRELATQIIQEISPKNIILALDIRLI 133 >UniRef50_A7SPR8 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SPR8_NEMVE Length = 545 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 95/332 (28%), Positives = 156/332 (46%), Gaps = 76/332 (22%) Query: 2 LAKRIIPCLDVRD---GQVV--KGVQFRNHEI----------------IGDIVPLAKRYA 40 LAKR+I L+VR G++V KG QF EI +GD V L +R+ Sbjct: 214 LAKRVITSLNVRTNNMGELVATKGEQFEVREIISDDEGNKPVKGDVKAVGDPVELGERFF 273 Query: 41 EEGADELVFYDITASSDGRVVDKSWVS---RVAEVIDIPFCVAGGIKS------------ 85 +GADE+ F +IT+ + D + + + E I +PF V GGI+ Sbjct: 274 SDGADEIAFLNITSFRSSPIHDLAMLKLLRKCCERIFVPFTVGGGIRDIYALDPDSVEEG 333 Query: 86 ---------LEDAAKILSFGADKISINSPALADPT-------------LITRLADRFGVQ 123 LE AA GADK+S+ S A+ I ++A+R+G Q Sbjct: 334 KPVMRQFSALEVAAMYFKSGADKVSVASDAVYAAEEFIASGHKKTGKTSIEKIAERYGRQ 393 Query: 124 CIVVGID------------------TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 +V+ +D Y G+ +V + + V+ Sbjct: 394 AVVLAVDTKTVYVPSPDSTKHHTVKARYPGPNGEKYVWWQCTVKGGRETRDVGAYELVKA 453 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 ++ GAGEI+LN +++DG +GYDL+ +K V+ +P+IAS GAG + F++ FR+ + Sbjct: 454 CEELGAGEILLNNIDRDGTNHGYDLDLVKMVKGAVSIPVIASSGAGHVSDFVDLFRETNA 513 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 DGA+A ++FH+ ++I ++K +L +G +R+ Sbjct: 514 DGAMAGAIFHRGEVDITDVKEHLRNEGFTVRL 545 >UniRef50_C6UMW5 Putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UMW5_HODCD Length = 241 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 98/251 (39%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 R + +DV++G+ V+ + + + +++ + D + D+ + G Sbjct: 1 MRFLASIDVKNGECVRLCRGQMADCRVYASSPLEAVRKFNLQCCDLVHIVDLDGAVCGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + A + V GG+++L DA L GA K+ + + A+AD + ++ + Sbjct: 61 QNWRSILEAARQLKGCVQVGGGVRTLADAKLYLEGGASKVVLGTSAIADMEFVCHVSWLY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V G + + T V+ V +++ ++ +N Sbjct: 121 PGRVCV-----------GVDTFGELVATDGWTAVSCVRCDQLVPKLEAARVSCLIWTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG G + + L +V VP+I SGG T ++ + G + +++ Sbjct: 170 RDGTLQGVNFDALDRVLAASAVPVIVSGGVATALDLIKLHNLYADKLAGVICGKALYERT 229 Query: 239 INIGELKAYLA 249 + ++ L+ Sbjct: 230 LTARFARSILS 240 >UniRef50_D1RFK6 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RFK6_LEGLO Length = 246 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 102/247 (41%), Gaps = 12/247 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ Q + ++ + A +A+ GA L D+ + G + Sbjct: 1 MILIPAIDLQAGRCVRLRQGQFDQVTQFDMSPIDRASYFAKLGAKRLHIVDLDGAKIGTM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + + GGI+SLE A S G + I S A+ DP L T++ + Sbjct: 61 QQLPLICTM-QHTGVTVQAGGGIRSLEQAKTCYSAGISLLVIGSIAITDPGLTTKIINEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I++ +D + + + + + + V Q+ G +I+ + Sbjct: 120 SPKNIILALDIRMENKIPLPATHGWQTT------STMNLWEVVSFYQQLGITQILCTDIA 173 Query: 181 QDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG+ G + + ++ V ++ ASGG + + + + A+ ++ + Sbjct: 174 SDGMMQGPNFDLYQEAVERFPNIAWQASGGIRHQDDINK-LQKLGIKAAILGLTMYQDVF 232 Query: 240 NIGELKA 246 N+ + + Sbjct: 233 NLKSILS 239 >UniRef50_C6Y3G6 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamideisomerase n=2 Tax=Pedobacter RepID=C6Y3G6_PEDHD Length = 249 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 103/252 (40%), Gaps = 11/252 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+ DG+VV+ + I + + Y G + + D+ + G Sbjct: 1 MYIIPAIDILDGKVVRLTEGDYNQKTVYDVSIAEMIETYRSNGTEFIHIIDLNGAK-GDF 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + V + D+ GGI++++ +L G ++ + + A+ +P + L+ Sbjct: 60 SNQKALFEVIKKTDMRVQYGGGIRTIKQVTDLLDAGIHRVIVGTQAITNPDFLQELSKEV 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + D +++ + + +D+V + + G + +N Sbjct: 120 GKK-----YDYANRIVIAIDVLDEVIKYSGWMESSPIKLMDYVDKCLQLGFFRFLCTDIN 174 Query: 181 QDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +E KK+ E + LIASGG +M+ E D+ + ++ I Sbjct: 175 KDGKLGGAAVELYKKLLEHSPFIKLIASGGVSSMKDIEE-LDKYDIRSVVVGKAIYENRI 233 Query: 240 NIGELKAYLATQ 251 I ++K + Q Sbjct: 234 TIDQIKEWNLKQ 245 >UniRef50_A7H8C3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Bacteria RepID=HIS4_ANADF Length = 238 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 98/241 (40%), Gaps = 15/241 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ G+ V+ + A+ +A GA L D+ + G Sbjct: 1 MLVIPAIDLMGGEAVRLEKGDFATKTVYARHPAEKAEEFARAGATLLHVVDLDGAKAGWP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ V + EV I + GG++SL D K+L+ G + + + A+ L+ + RF Sbjct: 61 VNLDAVRAICEVPGIEVELGGGLRSLPDIEKVLALGVRYVVLGTAAVERLGLVEQACQRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q G N T +D ++V+ G G + + Sbjct: 121 PGQV-----------RAGIDARNGEVKIAGWLEGTGLAAVDVARKVKGAGVGLVEYTDVA 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G D +++ +P++ASGG +++ A R A + G + +++ I+ Sbjct: 170 RDGMFTGVDAAGAARIQAEAGIPVVASGGVASLDDV-TACRAAGLAGVIVGKALYERRID 228 Query: 241 I 241 + Sbjct: 229 L 229 >UniRef50_O29276 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Archaeoglobaceae RepID=HIS4_ARCFU Length = 238 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 109/246 (44%), Gaps = 18/246 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 R+IP +D++DG+VV+ Q + E+ + + +AK++ E GA L D++ + GR+ Sbjct: 2 FRVIPAIDLKDGKVVRLRQGKEDEVTFEATNPIEVAKQWVEIGAKVLHVIDLSGAFQGRL 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ +A++ + V GGI+ A ++ G D++ + A+ + A ++ Sbjct: 62 RHEEIIAEIAKMAE--VQVGGGIRDFRVAERLFELGVDRVIFGTIAVERVEELREFAKKW 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + +V D++ G+ V + V + + + + ++ Sbjct: 120 KGRVMVA-----IDSKKGRVAVKGWK------EVVELTPVQLAELYDDLDVS-FLYTNID 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G+ +G + E++++V + P+ +GG ++E + G + S + + + Sbjct: 168 VEGLVSGIERERIEEVVKSLRNPVYVAGGISSIEDI-RFAKRVGAAGVVIGSALYTKKLK 226 Query: 241 IGELKA 246 E Sbjct: 227 FEEAIK 232 >UniRef50_D2L5A7 Histidine biosynthesis protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5A7_9DELT Length = 261 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 7/256 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+IP + V+ G VV+ + FR + +G + + DE+V I D Sbjct: 1 MLKKRLIPVVLVKQGLVVQSIGFRRYLPVGRPKITVEFFNRWDCDEIVLLAIDREPD-LA 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V+ +P V GG++ +ED ++L GADK+S+N+ A DP LITR A+ F Sbjct: 60 RLAGLTAHVSGAAFVPLTVGGGVRRIEDFQELLRAGADKVSLNTAAFRDPELITRAAEAF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +VV ID A+ T + D+ +E ++RGAGEI+LN ++ Sbjct: 120 GNQEVVVSIDARRHADG-----RYEVFVGGGREATGADPRDFAREAERRGAGEILLNAID 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + GYDLE +++V +P+IA GG G +EH EA A A+++FH + Sbjct: 175 RDGGKQGYDLELVRRVATAVSIPVIALGGVGRIEHVPEAIGAG-AAAAAASNIFHHIEHS 233 Query: 241 IGELKAYLATQGVEIR 256 K + G+ +R Sbjct: 234 TILAKQAMHKAGIAVR 249 >UniRef50_B4U8M5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8M5_HYDS0 Length = 234 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 99/244 (40%), Gaps = 17/244 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + IIP +D++DG VV+ + + + + K + + G + D+ + G Sbjct: 1 MKDFIIPAIDIKDGAVVRLKEGKFENVKVYRQNPIDQFKLFVDLGFTRIHIVDLDGAKVG 60 Query: 59 RVVDKSWVSR-VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + + + + D + GGI+SLE A + GAD I + + A+ D RL Sbjct: 61 IPKNLKLLEDMLKQKNDAKVEIGGGIRSLETAKALFEIGADYIIVGTLAVKDKEEFIRLL 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + + I+ DA+ GK + + + D + + Sbjct: 121 ELYKDRIIL-----SVDAKNGKVAIGGW------EEESSISPCDMARIYDNYPIESYLYT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +N DG G D+ K ++ P+IASGG ++E ++ V+G + ++ Sbjct: 170 NINIDGTLTGVDINPYKDFKKCTTKPIIASGGVASLEDVIKL--KTVVNGVVVGKAIYEN 227 Query: 238 IINI 241 I+I Sbjct: 228 KIDI 231 >UniRef50_B9K9S2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=HIS4_THENN Length = 248 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 107/260 (41%), Gaps = 21/260 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +VV+ V+ + D + L ++ EEG + D++ + + Sbjct: 1 MLVIPAIDLYRKKVVRMVKGKKENTIFYEKDPIELVEKLVEEGFSLIHVVDLSRAIEESD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +++ D + GGI+ LE A K+L G + ++S L DP+ + +L + Sbjct: 61 ENLPVLEKLSSYAD-HIQIGGGIRILEYAKKLLGMGFRRQIVSSKVLEDPSFLKKLKE-- 117 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 I V D GK + ++ + + V +++ G EIV + Sbjct: 118 ----IGVNPVFSLDTREGKVAFKGWLDEK------DIDPVFLVNRLKEFGLEEIVHTEIE 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR-----DADVDGALAASVFH 235 +DG +D +++ V +IA+GG + EA + + G + F Sbjct: 168 KDGTLKEHDFSLTERIALETGVKVIAAGGISSERSLEEALEVHRRTNGLLKGVIVGRAFL 227 Query: 236 KQIINIGELKAYLATQGVEI 255 + + + +K Y + + Sbjct: 228 EGTLTVEVMKRYACQENNSV 247 >UniRef50_C4L175 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L175_EXISA Length = 237 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 16/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 R++P +D+ G++V+ + E GD L K + + + D+ + G Sbjct: 1 MRLLPAIDLIGGKIVRLTEGDFSTEEQYGDPYELLKAWQGK-VPMIHLIDLEGAKAGEPR 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V A+ + GGI+S ++ GAD++ + + A DP + + +++G Sbjct: 60 HLDVVR-YAKSLGFLVQTGGGIRSEASLDAVMETGADRVLLGTKAFTDPDFLDKAIEKYG 118 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V DA GK +N + T+ + + Q++ KRG I+ + Sbjct: 119 KRVAVA-----LDAYDGKVAINGW------QEATKLDDISVAQDLVKRGIETILYTDIGS 167 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG NG ++ ++K +R++ +V LIASGG T E E + A +D A+ ++I Sbjct: 168 DGKLNGPNVTRMKALRQIVNVTLIASGGVTTEEDVKE-LKMAKIDEAVVGKALLSGKVSI 226 Query: 242 GELKAY 247 EL + Sbjct: 227 EELIEW 232 >UniRef50_A1WSE3 Histidine biosynthesis n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WSE3_VEREI Length = 229 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 119/218 (54%), Gaps = 6/218 (2%) Query: 39 YAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD 98 Y +GADELVF DI AS R + R A+ I +P V GGI+SL D +L GAD Sbjct: 17 YYSQGADELVFMDIVASLYQRNNLAGIIERAADQIYVPITVGGGIRSLHDVRTMLCSGAD 76 Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 K++IN+ A+A P LI +++RFG QC+V+ ++ + G ++ T + Sbjct: 77 KVAINTAAVARPGLIAEVSERFGSQCMVLSVEAKRKSGGGWEAF-----VDNGREHTGLD 131 Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + WV++ GAGEI+L ++Q+G R G+D++ ++ V VP+IASGG G + Sbjct: 132 VVAWVRQAVALGAGEIMLTSVDQEGTRKGFDVDLVRTVAGCVTVPIIASGGYGRPSDLQQ 191 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 A +A G A H Q I ELKA+ G+E+R Sbjct: 192 A-AEAGASGLAIADALHWQRATIAELKAHARAAGLEVR 228 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 31/88 (35%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D+V ++ GA E++ + + D V VA + +P +GG D Sbjct: 131 DVVAWVRQAVALGAGEIMLTSVDQEGTRKGFDVDLVRTVAGCVTVPIIASGGYGRPSDLQ 190 Query: 91 KILSFGADKISINSPALADPTLITRLAD 118 + GA ++I I L Sbjct: 191 QAAEAGASGLAIADALHWQRATIAELKA 218 >UniRef50_Q0AP83 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Alphaproteobacteria RepID=HIS4_MARMM Length = 244 Score = 183 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 101/252 (40%), Gaps = 12/252 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+ DG+VV+ + D + +A+++ E GA + D++ + DG Sbjct: 1 MILYPAIDLLDGRVVRLHKGAFDAVTDYGDDPMRVAEQFGEAGAVWVHIVDLSGARDGAR 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + E + GG++S ED +L+ G +++ I S A+ D + + Sbjct: 61 RQGALIRSLCE-TGLRVQTGGGVRSAEDIEDLLAAGVERVIIGSLAVTDTNRVAGWLQNY 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G I + +D + + + T + D + + G ++ + Sbjct: 120 GGDRITLALDVRQIGGQYRPALKGW------TDMADTTLDDVISAYEGTGLAHALVTDIG 173 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG +G ++ K++ + ++ ASGG +++ A + ++ Sbjct: 174 RDGDLSGPNIALYKRLATDYPNIDWQASGGVSSLDDLRAARAAGAAGA-ITGKALYEGRF 232 Query: 240 NIGELKAYLATQ 251 +GE A L Sbjct: 233 TVGEAIACLRDA 244 >UniRef50_C9YDK8 Imidazole glycerol phosphate synthase subunit hisF n=2 Tax=Bacteria RepID=C9YDK8_9BURK Length = 286 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 92/256 (35%), Positives = 134/256 (52%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IP L + +VKGV F + +G ++P K Y + DELV DI A G Sbjct: 27 MLKVRVIPTLLWKHFGLVKGVGFNSWRRVGPVLPAIKVYNQREVDELVLVDILAHGRGEE 86 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + + +P V GGI +E ++L GADK+S+N+ A A P L++ +A R Sbjct: 87 PDYESIHEFGQDCFVPLTVGGGITHIEQVQRLLRVGADKVSLNTAAYARPELVSDIARRH 146 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 GVQC+V ID A G + T+ T + + W +E++ RGAGEI++ ++ Sbjct: 147 GVQCVVASIDVRPRAGGGW-----DCFSHAGTQPTGRDVVAWARELEDRGAGEILVTSID 201 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG GYDL + V + +P+IASGGAG +H ++A A AAS+FH + Sbjct: 202 LDGSMRGYDLALVAAVAQAVKIPVIASGGAGNYQHMVDAVVQAGAAAVAAASIFHFTEMT 261 Query: 241 IGELKAYLATQGVEIR 256 KA LA GV +R Sbjct: 262 PAGAKAALAEAGVPVR 277 >UniRef50_A1ZVN4 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZVN4_9SPHI Length = 246 Score = 182 bits (463), Expect = 9e-45, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 101/249 (40%), Gaps = 15/249 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I+P + + G+VV+ ++ + + + LA + G L D+ + ++ Sbjct: 2 IKIVPSIAILGGKVVRTIKGDIDQVQVYDTNPLDLALEFENNGIKHLHLVDLDGAKARQI 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + +A + GGI +D GA ++ + A+ + + Sbjct: 62 VNYNILEMLASYTQLEIDYTGGITRDDDIRTAFECGAKHVTAATVAVHEREKFLSWVITY 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G +++ D ++ + + T + ++ ++ +RG + + Sbjct: 122 GGNKVILAAD----------ALDGVVLTKGWRKNTGIDLVEHIKSYHERGVRFVKTTEIG 171 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++G G + + KK+R E + ++ASGG ++E E V G + ++ I Sbjct: 172 RNGTLEGPNFDTYKKLRTEFPELQILASGGIRSIEDI-EQLDALGVAGVIIGKSYYDGQI 230 Query: 240 NIGELKAYL 248 + +L+ ++ Sbjct: 231 KLKDLQKFI 239 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 7/120 (5%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADEL--VFYDITASSDGRVVD 62 ++I D DG V + D+V K Y E G + + +G + Sbjct: 125 KVILAADALDGVV--LTKGWRKNTGIDLVEHIKSYHERGVRFVKTTEIGRNGTLEG--PN 180 Query: 63 KSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 ++ + +GGI+S+ED ++ + G + I + L G Sbjct: 181 FDTYKKLRTEFPELQILASGGIRSIEDIEQLDALGVAGVIIGKSYYDGQIKLKDLQKFIG 240 >UniRef50_B9WJS1 Imidazole glycerol phosphate synthase [includes: glutamine amidotransferase; cyclase], putative n=6 Tax=cellular organisms RepID=B9WJS1_CANDC Length = 622 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 92/329 (27%), Positives = 145/329 (44%), Gaps = 73/329 (22%) Query: 2 LAKRIIPCLDVR---DGQVV--KGVQFR----------------NHEIIGDIVPLAKRYA 40 L +RII CLDVR DG +V KG Q+ +G V LA +Y Sbjct: 288 LTRRIIACLDVRTNDDGDLVVTKGDQYNVREQQSSSSKISENSNQVRNLGKPVELATKYY 347 Query: 41 EEGADELVFYDITASSDGRVVDKSWV---SRVAEVIDIPFCVAGGIKSLED--------- 88 +GADE+ F +IT+ + + D + + AE I +P V GGIK L D Sbjct: 348 NQGADEITFLNITSFRNSPLKDLPMLQVLRKSAETIFVPLTVGGGIKDLYDSETKKIIPA 407 Query: 89 ---AAKILSFGADKISINSPALADPT-------------LITRLADRFGVQCIVVGIDTW 132 A GADKISI S A+ I ++ +FG Q +V+ +D Sbjct: 408 VDIAHLYFQSGADKISIGSDAVIIAENYYANNQIPLGTSSIETISSKFGNQAVVISVDPK 467 Query: 133 YD----------------------AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 G+ + + ++ + L+ +K G Sbjct: 468 RKYIKNPQLDTTMETIKIIDPLQYGPNGEQYCYYQVTSQGGRKLHELGALELCLACEKLG 527 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR-DADVDGAL 229 AGEI+LN ++ DG G++L+ L++++ +P+IAS GAG +HF + F D +D AL Sbjct: 528 AGEILLNSIDNDGSNKGFNLQLLQQIKSHVSIPVIASSGAGNPQHFQQVFEMDCGIDAAL 587 Query: 230 AASVFHKQIINIGELKAYLATQ-GVEIRI 257 A +FH+ + E+K YL + +++R+ Sbjct: 588 GAGIFHRGEYTVNEVKKYLQQEAKMDVRL 616 >UniRef50_A3UE29 HisF (Cyclase) n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UE29_9RHOB Length = 261 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 18/268 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-------- 52 ML R+IP L + +GQ+V+ F H+IIGD + R+ E DEL++ DI Sbjct: 1 MLMPRLIPVLLLMNGQLVRSETFTTHQIIGDPLHEVARFNEWKVDELIYLDISRTAGLAQ 60 Query: 53 ---TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 A + + VA +P G + SL+ I GADK++IN+ A Sbjct: 61 GRRDAGNRAYADAMDVLEAVASHCFMPLTWGGHVTSLDQVRDIFKRGADKVAINTAAYET 120 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 P LIT+++ RFG Q +VV ID + + T + + W +E + R Sbjct: 121 PDLITQVSKRFGAQAMVVSIDARQIENGYEVM------TQGGRTATGRDPVSWAKEAEDR 174 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GAGEI+L +++DG GYD +++V + +P+IA G G EH+ + + A Sbjct: 175 GAGEILLQSLDRDGRGTGYDTTLIEQVSQAVTIPVIACSGVGVYEHYAKGLKAGADAVAA 234 Query: 230 AASVFHKQIINIGELKAYLATQGVEIRI 257 A +++H + + K L G ++R+ Sbjct: 235 A-NIWHFKELADRGGKRALQRAGFDVRM 261 >UniRef50_C6XVQ0 Histidine biosynthesis protein n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XVQ0_PEDHD Length = 288 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 7/256 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+ L V+DG VV+ + F+ + +G + + G DE++ DI+A+ Sbjct: 1 MLKKRVAANLVVKDGIVVQSIGFKKYLPVGKPEIAIEFLNQWGIDEIILTDISATRKQSG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + R A+ +P V GGI + ++L GADKIS+N+ A+ P LIT A F Sbjct: 61 PDFDMIRRAAQKCFVPLTVGGGISNTGQMKELLHNGADKISLNNAAITTPELITETAHIF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+ ID + + + + ++ + + GAGEI++N ++ Sbjct: 121 GGQCVVISIDGIHTNKGFRIYDY------LTHSALDISPSEFAKRAEDSGAGEILINSVD 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G+D E + V V ++P+I GGA F+E F + A AA+ FH + Sbjct: 175 RDGSYLGFDHELINSVCSVVNIPVIVCGGAKNAGDFIEVFSKTNASAATAANFFHFSEHS 234 Query: 241 IGELKAYLATQGVEIR 256 + K+ L + +++R Sbjct: 235 VNITKSIL-NKKMDVR 249 >UniRef50_C1FJN8 Predicted protein n=13 Tax=cellular organisms RepID=C1FJN8_9CHLO Length = 601 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 88/311 (28%), Positives = 134/311 (43%), Gaps = 58/311 (18%) Query: 2 LAKRIIPCLDVRDG-----QVVKGVQ--------FRNHEIIGDIVPLAKRYAEEGADELV 48 LAKR+I CLDVR V KG + +G V LA +Y ++GADE+ Sbjct: 283 LAKRVIACLDVRSNDAGDLVVTKGDSYDVREKDDGNDVRNLGKPVELAGKYFKQGADEVA 342 Query: 49 FYDITASSD---GRVVDKSWVSRVAEVIDIPFCVAGGIKSLED-----------AAKILS 94 F +IT D + R +E + +P V GGI+ D AA Sbjct: 343 FLNITGYRDLPLTDAPMLEVLRRSSETVFVPLTVGGGIRDFTDSNGVSYTALEVAAAYFK 402 Query: 95 FGADKISINSPALA-------------DPTLITRLADRFGVQCIVVGIDTWY-------- 133 GADK+SI S A+ T I ++++R+GVQ +VV ID Sbjct: 403 AGADKVSIGSDAVYVAEQYYANDKKKDGCTSIEQISERYGVQAMVVSIDPRRAYVADPSE 462 Query: 134 ----------DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 G+ +V + + ++ G GEI+LN +++DG Sbjct: 463 TKNRCIKTSRPGPNGEEYVWFQCTVKGGREGRDIGAYELAIAMEDLGCGEILLNCIDEDG 522 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 NG+D E + V + +P+IAS GAG +HF + F ALAA +FH+ ++I E Sbjct: 523 QGNGFDHELVGLVADAVTIPVIASSGAGEPKHFTDVFNATKCSAALAAGIFHRGEVDISE 582 Query: 244 LKAYLATQGVE 254 +K ++ + Sbjct: 583 VKDHMKGGKIP 593 >UniRef50_D1B860 Histidine biosynthesis protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B860_THEAS Length = 232 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 92/246 (37%), Gaps = 18/246 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+ G+VV+ R +A +A+ G D+ + GR Sbjct: 1 MEIYPAVDLYGGKVVRLTGGRFQDATVYPTSPGEMALLFAQAGVRWAHVVDLEGAKTGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V + A + GGI+S++ LS GA ++ + S + F Sbjct: 61 VHLWALEAFAGA-GLKVQFGGGIRSIQSVRDALSAGATRVMMGSALFDRSVDVVEAHRLF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + D + V + T+ T ++ + + G ++ + Sbjct: 120 GPAIL-----PAVDHRGWRVSVKGW------TQGTDIPVDRALENLSRVGFSLFLVTDGD 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G DLE +K+ + IA+GG G + H R+A GA+ ++ I+ Sbjct: 169 RDGTLSGPDLEGYRKICARYGI--IAAGGIGELGHL-RGLRNAGAAGAVLGKALYEGAIS 225 Query: 241 IGELKA 246 I E Sbjct: 226 IEEAMR 231 >UniRef50_A4EBZ6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EBZ6_9ACTN Length = 247 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 105/257 (40%), Gaps = 20/257 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGR- 59 + P +D+ G+VV+ + D V +A+ +AE+GA + D++++ Sbjct: 1 MILFPAIDLIGGKVVRLERGDRSRCKVYSDDPVAVARSFAEQGASWVHVVDLSSAFGEDE 60 Query: 60 ---VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + + + V + V GG++SL ++ +GA +I++ + + +P Sbjct: 61 DTCAANSAAIKAICGVDGLSVDVGGGVRSLARIDELAGYGARRIALGTVLVTEPGFAEVA 120 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 A FG + +V I + D V ++ + G +V Sbjct: 121 AQGFG-ELLVADIAAR----------DGQVKVNGWRDGAGVALDDAVAQLSELGFKHLVY 169 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL--EAFRDADVDGALAASVF 234 + +DG++ G D+ + V EV P++ASGG ++ A + ++GA+ Sbjct: 170 TDIARDGMQTGIDVAAYRHVAEVAGFPVVASGGISALDDIRALAAVGEGAIEGAITGRAL 229 Query: 235 HKQIINIGELKAYLATQ 251 ++ + + A + Sbjct: 230 YEGNFTLAQALAAARGE 246 >UniRef50_Q6SHC0 Imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=uncultured marine bacterium 440 RepID=Q6SHC0_9BACT Length = 262 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 134/263 (50%), Gaps = 17/263 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD---GRVV 61 RIIP L +++G +V+ F H+ IG+++ AKR + DELV+ DIT + + GR Sbjct: 6 RIIPVLFIKNGLIVRSQNFYKHQFIGNVIEQAKRLNDYDVDELVYIDITRNDNYDLGRDD 65 Query: 62 DK--------SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 S + +++V +P GGI+S++DA + GADKI+INS D ++ Sbjct: 66 LLVKSKRDIMSIIKDISKVCFMPLTFGGGIRSVDDAVNRIRAGADKITINSLLYKDLNIV 125 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 ++ G Q +V ID E + T E +D++++++ G GE Sbjct: 126 KKIISEIGSQAVVASIDYKIINE------KLIIFNNFGQDNTNIELIDFIKKIENLGVGE 179 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + + DG++ G+DL +KK+ ++P+IA GAG++EHFLEA + + A + Sbjct: 180 FFIQNVELDGMQKGFDLNNIKKIVNSVNLPVIACSGAGSLEHFLEAVKIKGLSAVAAGNY 239 Query: 234 FHKQIINIGELKAYLATQGVEIR 256 F+ + + +K L + +R Sbjct: 240 FNYKERSYPIIKKELKDFNINVR 262 >UniRef50_Q1AX07 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=HIS4_RUBXD Length = 243 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 16/246 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 + P +D++ G+ V+ Q D V A+ + GA L D+ + +GR V Sbjct: 9 VFPAIDLKGGRCVRLRQGDFGRERVYDADPVGRAREWERRGARALHVVDLDGAREGRPVQ 68 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + +A +P V GGI++LED GA ++ + + A+AD R + G Sbjct: 69 LALIREIARAAGVPLQVGGGIRTLEDVRAARRAGAARVVVGTAAVADRDFRLRALEELGA 128 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 +VV +D R + + E+ G ++ +++D Sbjct: 129 D-LVVAVDAR----------EGVVATHGWQRQSGVGAAELAGELAAEGVRAVLFTDISRD 177 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G G LE+ +V + +P IASGG R V GA+ + ++ + Sbjct: 178 GTGEGAALERTAEVAGI--IPTIASGGVRGAGDIRALARTPGVVGAVVGTALYEGQATLE 235 Query: 243 ELKAYL 248 EL A Sbjct: 236 ELLAAA 241 >UniRef50_A0LAC8 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAC8_MAGSM Length = 260 Score = 176 bits (448), Expect = 4e-43, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 7/224 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 M R+IP L +++G++VK V+F +GD V AK + ++ DEL DI+AS G Sbjct: 1 MRRIRVIPTLLLKEGRLVKTVRFNQAKATYVGDPVNTAKIFNDKEVDELAVLDISASRRG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 D V ++A +P GG+++L+ ++ G +K+ +N+ + L+ Sbjct: 61 AEPDFECVEQLASECFMPLLYGGGVRNLQQIQRLFHSGVEKVMLNTAFFSGSGLLQEAVK 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 +G Q + V ID D + R T + + Q+ ++ GAGE++LN Sbjct: 121 IYGSQSLGVSIDVKKDLWG-----RYRVMSQGGQRKTGLDPVVAAQQAEQAGAGELLLNA 175 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 M+QDG++ GYDLE +++V +P+IA GGA ++ F Sbjct: 176 MDQDGMQQGYDLELVQRVSRGVAIPVIAVGGAASVADFRTVVTQ 219 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 39/100 (39%), Gaps = 1/100 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + ++ + + E+ + ++ D E ++++ C +PL+ GG ++ Sbjct: 33 DPVNTAKIFNDKEVDELAVLDISASRRGAEPDFECVEQLASECFMPLLYGGGVRNLQQIQ 92 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 F + V+ + + F + E +Q + + I Sbjct: 93 RLF-HSGVEKVMLNTAFFSGSGLLQEAVKIYGSQSLGVSI 131 >UniRef50_B5YE89 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Dictyoglomus RepID=HIS4_DICT6 Length = 242 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 102/254 (40%), Gaps = 20/254 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+ +VV+ + +I+ + + LAK + E+GA L D+ ++ D Sbjct: 1 MLIIPAIDIYKHKVVRMETGKKEKIVLEFNNPLDLAKYWEEKGAKALHLIDLQSAIDAND 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 KS V + + IP V GG +S E + +S+G ++ ++S + + L ++ Sbjct: 61 ESKSIVRDIVRSVSIPVEVGGGYRSREKIEEAISWGVWRVIVSSILGMELDYLLDLFSKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I D GK + + D +++ E++ ++ Sbjct: 121 ENKII-----PSIDWYDGKVGIKGWQDFIEWR--------DIKRKIDLLKVREVIFTDIS 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR----DADVDGALAASVFHK 236 +DG G +LE +K + + +GG ++E ++ + G + + Sbjct: 168 RDGTLKGVNLENIKNFLSLHDYDVWIAGGISSIEDVIKIKDLSENTGRIKGIIIGRALLE 227 Query: 237 QIINIGELKAYLAT 250 IN E K + Sbjct: 228 GKINWEEAKKIIDA 241 >UniRef50_A8A8V9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8V9_IGNH4 Length = 235 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 19/247 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 R+ P +DV +G+ VK V+ +GD V A+ +A EGA L D+ + G+ + Sbjct: 1 MRVFPSIDVSEGRAVKRVRGVKGTGLDLGDPVKWAEFWALEGAKGLHVVDLDGAEAGKPI 60 Query: 62 DKSWVSRV---AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + +++V A+ + VAGG++ +E + AD I S A DP + ++ Sbjct: 61 NVEVINKVIEKAKEYGLWVQVAGGLREVEHLERYPK--ADAFVIGSRAHKDPEFLEVASE 118 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 G ++V ID GK V + + +++ + R + Sbjct: 119 AVGADKVIVAIDLK----GGKVSVEGWK------EEIPVGLKEALEKFKGRSFRGFLYTY 168 Query: 179 MNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 ++ +G G D+ +K + RE L +GG G+ EH + A D + + Sbjct: 169 VDTEGTMEGPDVSGVKYIRREYPDKLLEYAGGVGSPEHV-KLLESAGADVVVLGMALYSG 227 Query: 238 IINIGEL 244 + + +L Sbjct: 228 KLRLKDL 234 >UniRef50_Q5KNA0 Imidazoleglycerol phosphate synthase, putative n=3 Tax=Basidiomycota RepID=Q5KNA0_CRYNE Length = 619 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 89/331 (26%), Positives = 131/331 (39%), Gaps = 76/331 (22%) Query: 2 LAKRIIPCLDVRDG-----QVVKGVQFRNHEIIGD--------IVPLAKRYAEEGADELV 48 L RI+ CLDVR V KG Q+ E D V LA+RY GADE+ Sbjct: 282 LTNRIVACLDVRSNDAGDLVVTKGDQYDVREKSSDKAVRNLGKPVELAQRYYLSGADEVA 341 Query: 49 FYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKS-----------LEDAAKILS 94 F +IT+ V AE + +P + GGIK LE A Sbjct: 342 FLNITSFRSSALLDQPMLDVVRAAAETVFVPLTIGGGIKDTTDPDGTFHPALEVAGAYFR 401 Query: 95 FGADKISINSPALADPTL-----------------ITRLADRFGVQCIVVGIDTWYDAET 137 GADK+SI S A+ I ++ +G Q +VV ID Sbjct: 402 SGADKVSIGSEAVIAVEEMLEREARGEPALTGKTGIETISKGYGRQAVVVSIDPKRVYVD 461 Query: 138 --------------------------------GKYHVNQYTGDESRTRVTQWETLDWVQE 165 V + + Q Sbjct: 462 TSAPGWLESFPAKHRASLIIGDNATSRTAPQEKGKAWWYQCTISGGRAVRDIDVVQLAQG 521 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 V++ GAGEI+LN +++DG G+DL+ +K V+ +P+++S GAG+ F E FR+ Sbjct: 522 VERLGAGEILLNSVDRDGSGQGFDLDLVKLVKNAVGIPVVSSSGAGSPADFEEVFRETGT 581 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIR 256 + ALAA +FH+ + I E+K +L + + +R Sbjct: 582 EAALAAGIFHRGEVGIDEVKGWLEGKEMAVR 612 >UniRef50_C2FZQ4 Possible isomerase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZQ4_9SPHI Length = 250 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 101/251 (40%), Gaps = 10/251 (3%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +DV D +VV+ + + RY G + + D+ + G Sbjct: 1 MYIIPAIDVLDKKVVRLREGNYDDVTTYDISLEEQIDRYHANGTELVHIIDLNGAK-GDF 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ ++ + ++ GG++S+E +++ G ++ + + A+ +P + L+ Sbjct: 60 SNQEYLFNIIRKTEMKIQYGGGVRSIEKVKELIDAGVFRVIVGTQAITNPEFLEELSTL- 118 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + D A V +Y + + ++++ + G + ++ Sbjct: 119 -NEGKIKYADHIVIAIDVLDEVIKY---SGWLESSPIKLIEYIDKCLALGFYRFLCTDIS 174 Query: 181 QDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +E KK+ + + LI SGG +M+ + ++ + ++ I Sbjct: 175 KDGKLGGAGVELYKKLLDHSPIIKLIGSGGISSMDDIRKLQELGRMESCVVGKAIYENRI 234 Query: 240 NIGELKAYLAT 250 +I E++ + Sbjct: 235 SIEEIQDWNLK 245 >UniRef50_A6Y2G9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 2 n=4 Tax=Vibrio RepID=A6Y2G9_VIBCH Length = 262 Score = 173 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 104/261 (39%), Gaps = 20/261 (7%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQF--------RNHEIIGDIVPLAKRYAEEGADELVFYDI 52 M ++ P +D+ G+ + +G++ +A+ + + GA + D+ Sbjct: 1 MEEFKLYPSIDIVGGKALTSRSAIDITLGITEEKTYLGEVFEVAELHFQSGAKWIHIVDL 60 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFC--VAGGIKSLEDAAKILSFGADKISINSPALADP 110 A+ G ++ + + + V GGI+S E + + G +++I+S P Sbjct: 61 DAA-SGVGSNQRLIMDLVKHFSEKVQTQVCGGIRSNEILEQYILAGCSRVNISSMIFDKP 119 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 L +L ++G + I + +D + K + + W TLDW + G Sbjct: 120 KLCEKLLKKYG-EKIAIALDVKLVNQEYKLATRGWNTLQGNL----WTTLDW---LDNSG 171 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 VL +++ G N + L++V P+I+ GG +++ + ++GA+ Sbjct: 172 CQRYVLTDVDRGGSLNHPNFSLLEQVLTKTSTPIISGGGLCSLDDI-DRLYQIGIEGAVL 230 Query: 231 ASVFHKQIINIGELKAYLATQ 251 + H Q + Y+ Sbjct: 231 GQLIHTQQHQLKRFLQYVQQN 251 >UniRef50_B8LDL7 N-acetyl-glutamate-gamma-semialdehyde dehydrogenase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDL7_THAPS Length = 570 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 87/325 (26%), Positives = 136/325 (41%), Gaps = 69/325 (21%) Query: 2 LAKRIIPCLDVRDG-----QVVKGVQFR--------------NHEIIGDIVPLAKRYAEE 42 L KR++ LDVR V KG Q+ +G V LA RY +E Sbjct: 244 LVKRVVVALDVRSNDHGDLVVTKGDQYDVRENEKEGVQEGRGGVRNLGKPVSLASRYYKE 303 Query: 43 GADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLED----------- 88 GADE+ F +IT+ G + + ++ I +P V GGI+S ED Sbjct: 304 GADEIAFLNITSFRSGVIEDMPMLQVLEEASKEIFVPLTVGGGIRSYEDPGTGKVYSALE 363 Query: 89 -AAKILSFGADKISINSPALADPT-------------LITRLADRFGVQCIVVGIDTWY- 133 A++ GADK+SI S ++ I ++ +GVQ +V+ ID Sbjct: 364 VASRYFRAGADKVSIGSDSVHAAEEYIASGNTKTGQTSIETISHVYGVQAVVISIDPKRV 423 Query: 134 ---------------------DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 G+ + + + + + GAG Sbjct: 424 YVTSPDAADSKHTVVTLDDSQKGPNGEQYCWYQCTVKGGREARDICAVSVAKAAEALGAG 483 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 EI+LN ++ DG NG+D +K V + +P+IAS GAG HF + F + V ALAA Sbjct: 484 EIMLNCIDMDGQCNGFDHALMKAVSDAVTIPVIASSGAGKESHFSDVFSETSVQAALAAG 543 Query: 233 VFHKQIINIGELKAYLATQGVEIRI 257 +FH++ + I ++K ++ G+ RI Sbjct: 544 MFHRKEVEIADVKKHMEKMGIRARI 568 >UniRef50_B6BR00 Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BR00_9RICK Length = 254 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 135/257 (52%), Gaps = 10/257 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNH-EIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 ML RII + +VKG +F N G + K Y DE++F+DI+ + + Sbjct: 1 MLKARIITTMLWNGSTLVKGNKFENEKRSAGSPLTTVKIYNSRDVDEILFFDISR--NNK 58 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 ++DK ++ + + + +P + GGI+ + + +GADK++INS +P +I + R Sbjct: 59 IIDKDFILSITDCVSVPITIGGGIEKISQMNDLFEYGADKVAINSIIYKNPNIIDEASKR 118 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FG Q I V ID + + + + + + D + E RGAGEIV+N + Sbjct: 119 FGSQAITVSIDVRKNNQNYE------CYYDLGKIKSDRKLNDLLVECVNRGAGEIVINCI 172 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 N DG+ GYD E +++ + ++P++ASGGAG+ EHF EA+++ D AAS++H Sbjct: 173 NNDGLMKGYDNELIQQTSSLANIPIVASGGAGSYEHFYEAYKN-GADAFAAASIYHFTEH 231 Query: 240 NIGELKAYLATQGVEIR 256 + K YL + V IR Sbjct: 232 TPAKAKKYLLKKKVPIR 248 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 3/105 (2%) Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGT 212 + + L V+ R EI+ ++++ D + + + + VP+ GG Sbjct: 27 KRSAGSPLTTVKIYNSRDVDEILFFDISRNNKI--IDKDFILSITDCVSVPITIGGGIEK 84 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + + F D S+ +K I E +Q + + I Sbjct: 85 ISQMNDLFEY-GADKVAINSIIYKNPNIIDEASKRFGSQAITVSI 128 >UniRef50_Q1N2Y7 HisF protein n=1 Tax=Bermanella marisrubri RepID=Q1N2Y7_9GAMM Length = 223 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 67/230 (29%), Positives = 121/230 (52%), Gaps = 8/230 (3%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 +GD + K ++ ADE+V DI A+ R ++ + R++ +P + GG+ +LED Sbjct: 2 VGDAITNVKVFSSRKADEMVIVDIEATEKKR-INLPLLKRLSSHCIMPLTIGGGVTTLED 60 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + S GADK+ +NS P ++T ++ +FG Q +V +D + Sbjct: 61 AEDLFSVGADKVLVNSAFYNRPEILTDISSKFGRQAVVFSLDVMKKSNEY------VPVS 114 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 ++ + W + V+ + GAGEI+LN ++ DG+ G+DL K+V ++ VP++ +G Sbjct: 115 KNGSVKQSWTLRETVERAIEYGAGEIILNSVDCDGMMQGFDLNLCKQVSDISSVPVVIAG 174 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC 258 G GT E + A ++ D A S+F+ +I +K Y+ G+E+R+ Sbjct: 175 GCGTKEDCVLAV-NSGADAVAAGSIFYWVGESILTIKDYMNKNGLEVRLL 223 >UniRef50_Q2N6D2 Imidazoleglycerol-phosphate synthase, cyclase subunit n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2N6D2_ERYLH Length = 264 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 6/220 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M RIIP L + VK QF+ IGDIV A+ + + ADEL+ DI Sbjct: 1 MRRLRIIPVLLLDGTSAVKTHQFKPARYIGDIVNAAQIFNSKMADELIVVDI-GYHQDNP 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +AE +P GGI S+++AA + G +K+SIN+ + L+ A +F Sbjct: 60 SRPEVIRHLAEECFMPLAFGGGISSVDEAAALFKDGIEKVSINTAFVEGGALVEEAARQF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +V ID +A+ TR + ++ + + +GAGEI++ ++ Sbjct: 120 GSQSVVASIDARREADGSY-----QVYSRGGTRALGIDPVEMARRAEAQGAGEILIQSID 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 +DG+R GYD ++ + + +P++A GGA T++ + Sbjct: 175 RDGMRKGYDRNLVRSIVDATTLPVVALGGADTVDDLAQVI 214 >UniRef50_A5INE5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Thermotogaceae RepID=HIS4_THEP1 Length = 241 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 106/254 (41%), Gaps = 21/254 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++P +D+ G+V + V+ + D L K+ EEG + D++ + + V Sbjct: 1 MLVVPAIDLFRGKVARMVKGKKENTIFYEKDPAELVKKLIEEGFTLIHVVDLSKAIENSV 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + R++E + + GGI+S + A ++ G + ++S L DP+ + L + Sbjct: 61 ENFPVLERLSEFAE-HIQIGGGIRSFDYAERLRKLGYKRQIVSSKVLEDPSFLKFLKE-- 117 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 I V D GK + +E + + + ++ +++ G EIV + Sbjct: 118 ----IDVEPVFSLDTRGGKVAFKGWLAEE------EIDPISLLKRLKEYGLEEIVHTEIE 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR-----DADVDGALAASVFH 235 +DG +D +K+ V + A+GG + A R + + G + F Sbjct: 168 KDGTLQEHDFSLTRKIAIEAEVNVFAAGGISSENSLKTAQRVHRETNGLLKGVIVGRAFL 227 Query: 236 KQIINIGELKAYLA 249 + I+ + +K Y Sbjct: 228 EGILTVEVMKRYAR 241 >UniRef50_Q062W6 Putative cyclase hisF n=1 Tax=Synechococcus sp. BL107 RepID=Q062W6_9SYNE Length = 255 Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 11/261 (4%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYA----EEGADELVFYDITASS 56 M KR+I L + G F + IG++ L Y DELV D++ Sbjct: 1 MAKKRLIFTLLYQKGGFYLSRNF-RLQKIGNLSWLKINYNFYSVACAIDELVILDVSREK 59 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 R V+ V + +P + G I SL+DA ++ GADK+ IN+ +P L+ L Sbjct: 60 PDRQEFCEVVNEVCQNCFMPLALGGHINSLDDAKMLIYNGADKLIINTALHENPNLVREL 119 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 +G QCI+ +D E G + V G + R + ++ + + G GE+ L Sbjct: 120 IAIYGSQCIIGSVDYKI--EEGSFIVYTNQGKKRLDRPLN----EHIERLGEMGVGELYL 173 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 N +++DG GY E LK++ H+P+I +GGAG H E+ VD A++ + Sbjct: 174 NSIDRDGTGQGYVSEVLKQLDSASHLPIIQAGGAGNKHHLQESLECRGVDAVATANLLNF 233 Query: 237 QIINIGELKAYLATQGVEIRI 257 + + + +L +G+ + I Sbjct: 234 VGDGLPKAREFLINKGISMAI 254 >UniRef50_D2NNQ2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide isomerase n=2 Tax=Rothia mucilaginosa RepID=D2NNQ2_9MICC Length = 262 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 103/263 (39%), Gaps = 23/263 (8%) Query: 5 RIIPCLDVRDGQVVKGVQF--RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 ++P +D+ +G V+ V E D V A + + GA + D+ + GR + Sbjct: 7 ELLPAVDISEGYAVRPVGGTLSGGEQRLDPVEAALTWVKAGARWIHLVDLDLAF-GRGTN 65 Query: 63 KSWVSRVAEVI-----------DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 ++ V + + V+GG+++ E + LS D++++ S ALAD + Sbjct: 66 TEVLAEVVAAVRAENARMTGSAPVRIQVSGGVRNPESLERALSLNPDRVNVTSAALADSS 125 Query: 112 LITRLADRF-GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + R+ + +G+D Y E + T + + + ++ G Sbjct: 126 WLEGTLARYADSDLLALGLDARYTPE------RGWVTVARGTDWSGPGVAEALAWLEGAG 179 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGA 228 ++ +++DG G E L V P++ASGG ++ ++ + ++G Sbjct: 180 VRRYIVTDVSKDGSLAGPGAELLDVVLAQTDRPVVASGGVASLADLVKLRSMVPSGLEGV 239 Query: 229 LAASVFHKQIINIGELKAYLATQ 251 + + + + ++ Sbjct: 240 VLGKALYVGNFSFEQALEIAGSR 262 >UniRef50_Q8TYD6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Methanopyrus kandleri RepID=HIS4_METKA Length = 242 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 102/252 (40%), Gaps = 14/252 (5%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDG 58 +A +IP +DV +G+ V+ V+ D V A +++E + D+ A+ G Sbjct: 1 MAFVVIPSVDVVEGKCVQLVEGDPERRTFESDDPVETAHQWSEF-FPWIHVVDVDAAR-G 58 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + R+ E +D V GGI+S E A +++ GAD++ + + A D +++ D Sbjct: 59 EGDNSDIIGRICEEVDAKVQVGGGIRSAERAEELIELGADRLIVGTVAFTDKDDFSKIVD 118 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 I V + + N D ++ + A + Sbjct: 119 VCHDHGIEVFVALDVNE-------NHEVLVSGWKEDAGVTLEDAIERFNEV-ADGYLTTA 170 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 ++ +G G D + ++K +P++ +GG +++ A ++A G + + + Sbjct: 171 VHVEGKEMGIDEKVVEKSTGATDLPVLYAGGIASIKDVKRA-KEAGAYGVVIGTALYHGD 229 Query: 239 INIGELKAYLAT 250 I+ L + Sbjct: 230 IDPVALLDLMEE 241 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 1/71 (1%) Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 G + + + ++ E + GG + E E + D + +V + ++ Sbjct: 58 GEGDNSDIIGRICEEVDAKVQVGGGIRSAERAEE-LIELGADRLIVGTVAFTDKDDFSKI 116 Query: 245 KAYLATQGVEI 255 G+E+ Sbjct: 117 VDVCHDHGIEV 127 >UniRef50_A2BSD9 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus str. AS9601 RepID=A2BSD9_PROMS Length = 254 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 121/236 (51%), Gaps = 6/236 (2%) Query: 1 MLA-KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-TASSDG 58 M R+I L + +++K +F+N++ +GD + + + + + DE+ Sbjct: 1 MKKHPRVILSLIIDSKRMIKRSKFKNYKYLGDPLNIIRIFNSKRVDEISIISCENYEKKD 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 +D ++ +++ P +GG++SLEDA K+ S G +KI I + +P +I ++A+ Sbjct: 61 INIDFEFLEKISGEAFCPLTYSGGVRSLEDADKLFSIGFEKIGIRNLLHTNPEVIKQIAE 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 ++G Q +V+ ID E + YT S + T+ L++++ + GAGE+VL Sbjct: 121 KYGSQSVVIFIDYK---ELNNNEIEIYTSYNSFFKSTKSSILEFIKNAESYGAGEVVLQS 177 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + ++G G DL+ +K++ +P+I+S G + +AF DG +A+ F Sbjct: 178 ILREGQSKGLDLDIIKEITNKTILPIISSCGMRDLSDARKAF-SLGADGVMASKFF 232 >UniRef50_C2G0W0 Possible imidazoleglycerol-phosphate synthase HisF n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G0W0_9SPHI Length = 263 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 11/256 (4%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA----DELVFYDITASS 56 ML KR+I L DG ++ FR ++ GDI L K Y DELV +++ S Sbjct: 1 MLRKRVIFTLLYCDGFFMQSRNFRLQKV-GDINWLEKFYKFNKIAFSLDELVILNVSRKS 59 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + VSR+ E +P V GGI+SLEDA + GADKI +N+ +DP L+ + Sbjct: 60 KNQEEFGRTVSRLVEGTYMPVAVGGGIRSLEDAEMLFKSGADKIVLNTSLSSDPDLVKLI 119 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 ++G Q +V ID E+ + + E+ + +++ ++ GE+ L Sbjct: 120 VQKYGSQSVVASIDYLKKGESSEIFI------ENGSLNINEGFENYLSHLKDLNVGEVYL 173 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 N M +DG GYD +K V+ + +VPLI +GGAG H EA +++ A A++F+ Sbjct: 174 NSMERDGTGFGYDFSLVKLVKSILNVPLIIAGGAGNEGHLKEALLHSEISAAATANLFNF 233 Query: 237 QIINIGELKAYLATQG 252 + + + +L G Sbjct: 234 IGDGLPKARFFLINSG 249 >UniRef50_B9U3E3 HisA n=1 Tax=Taylorella equigenitalis RepID=B9U3E3_9BURK Length = 251 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 23/259 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFY--DITASSDG 58 IIP + ++DG+ V D + LAK++A+ GAD L + AS+ Sbjct: 1 MWIIPSIYIQDGKCVHVSYGDKTSSSPFEIDPLDLAKKWADLGADRLHIVQLGLNASTQN 60 Query: 59 RVV---DKSWVSRVAEVID--IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + +S++ E + +P +AGGIK++ L G D + + S + DP + Sbjct: 61 ATSLSKNNEVLSKLIEEVSHYLPLQIAGGIKTMASIESYLDMGFDFVVVGSAGVKDPHFM 120 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 F +++G+D + +S ++VT+++ + Q + G Sbjct: 121 NDACSAF-NGQVILGLDAR----------DGKVVTDSWSKVTKFDAVTIAQRLTDEGIDS 169 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTME--HFLEAFRDADVDGALAA 231 I+ M DG +LE + VP++A G G + H ++ D VDG + Sbjct: 170 IIYTDMGPDGNMTEVNLEATLNFAKAVDVPVLACGDVGQLSRFHEIKTLVDHGVDGIILG 229 Query: 232 SVFHKQIINIGELKAYLAT 250 + ++ E + + Sbjct: 230 KSLDLGVYSLQEAIDIVDS 248 >UniRef50_Q01ZU7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZU7_SOLUE Length = 227 Score = 163 bits (414), Expect = 4e-39, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 105/241 (43%), Gaps = 19/241 (7%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGD-IVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 I+PC+D+ DG+VV+ +Q R + GD + +R+ G E+ D+ A+ G+ + + Sbjct: 2 IVPCIDLMDGKVVQLIQGREKALEGDSPDEMLRRF--AGFPEIQVIDLDAAL-GKGSNDT 58 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 V +A V GG+++L+ A +LS GA ++ + + A + + Sbjct: 59 LVKMLASKAVCR--VGGGVRTLDRANTLLSQGAHRVIVGTSAFTKGGINVPFLETLDPAT 116 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 +V +D+ + T++ + + ++ + ++++G+ Sbjct: 117 TIVALDSK----------GGRIVVKGWQEATEFTAEEVLHSLEPY-CSGFLCTYVDKEGM 165 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 G DL+ ++R + A+GG T+E +A ++ A + +++ EL Sbjct: 166 MQGTDLDWFARLRAATAHEITAAGGITTLEDI-KALLAMNIHTA-VGMAIYTGRLDLEEL 223 Query: 245 K 245 + Sbjct: 224 R 224 >UniRef50_Q7U923 Putative imidazole glycerol phosphate synthase subunit hisF2 n=1 Tax=Synechococcus sp. WH 8102 RepID=HIS62_SYNPX Length = 269 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 11/240 (4%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYA----EEGADELVFYDITASS 56 M KRII L DG F+ IGD L + Y DEL+ DI+ S Sbjct: 1 MSKKRIIFVLLYCDGFFCLSRNFKLQR-IGDFRWLQRNYNFNYSATFIDELIILDISRKS 59 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + ++E I +P GGI+S EDA + GADK+ +N+ + P + ++ Sbjct: 60 RDINKFATLLYNLSENIFVPITAGGGIRSFEDAKVLFENGADKVCLNTSLIQCPHVSEKI 119 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + +G Q +V ID +D K+ ++ + Q+ + + + EI+L Sbjct: 120 SSVYGQQSLVASIDFKHDHGDFKFFID------NGLIEVQYNIQELISFLDPLPFCEILL 173 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 +++DG G+DL R+ P+I GGAG +H +E D A + + Sbjct: 174 QSVDRDGTGTGFDLTLANTFRDQLSKPIILLGGAGHSDHLVEGLLHQSTDAVATAHLLNF 233 >UniRef50_Q2YZ70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=60 Tax=Staphylococcus RepID=HIS4_STAAB Length = 234 Score = 160 bits (404), Expect = 6e-38, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 83/236 (35%), Gaps = 16/236 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQF--RNHEIIGDIVPLAKRYAEE--GADELVFYDITASSDGR 59 + P +D+ V+ + + E + + Y + + + D+ + Sbjct: 2 IELWPAIDLIGSTSVRLTEGKYDSEEKMSRSAEESIAYYSQFECVNRIHIVDLIGAKAQH 61 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + ++ + + V GGI++ + G + + + + D + +A Sbjct: 62 AREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYCIVGTKGIQDTDWLKEMAHT 121 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 F + I DA VN + T+ +V+++ G I+ + Sbjct: 122 FPGR-----IYFSVDAYGEDIKVNGW------EEDTELNLFSFVKQLSDIPLGGIIYTHI 170 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +DG +G + E ++ + +P+IASGG + +V A+ H Sbjct: 171 AKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQR-LASLNVHAAIIGKAAH 225 Score = 40.6 bits (94), Expect = 0.046, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 12/109 (11%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEE---GADELVFYDITASSDGR-- 59 RI +D G+ +K V + ++ K+ ++ G + DG+ Sbjct: 125 RIYFSVDAY-GEDIK-VNGWEEDTELNLFSFVKQLSDIPLGGIIYTHI-----AKDGKMS 177 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 + ++ + IP +GGI+ +D ++ S I A Sbjct: 178 GPNFELTGQLVKATTIPVIASGGIRHQQDIQRLASLNVHAAIIGKAAHQ 226 >UniRef50_C0WXE8 Imidazole glycerol phosphate synthase n=2 Tax=Lactobacillus fermentum RepID=C0WXE8_LACFE Length = 188 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 7/195 (3%) Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V +++ + +P V ++++ + +L GADK+ I++ ++ P I ++A FG Sbjct: 1 MLDMVEAISQQVFMPMTVVCNVRTVVEVRNLLLAGADKVGISTRSIMAPDFIPKVAQVFG 60 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 Q IV +D D T + V T+ + +W V + G GE+++N M++ Sbjct: 61 NQSIVAILDYHVDPRTNRKIVCT-------PGNTELDAYEWTLRVVELGVGELLVNSMDR 113 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG NG+D + + +P++ASGGAG+ F E F ++ V GA+AAS FH + I Sbjct: 114 DGTENGFDTAFYRDLTTTLTIPVVASGGAGSTVDFEEVFVNSGVTGAMAASAFHLDQMTI 173 Query: 242 GELKAYLATQGVEIR 256 E+K L +G+ +R Sbjct: 174 SEVKETLLEKGILVR 188 >UniRef50_UPI000038E352 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E352 Length = 229 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 91/243 (37%), Gaps = 25/243 (10%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEI--IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 I P +D+ +G+ V + +I GD V A+ ++ L D+ + G + Sbjct: 4 IYPAIDIYNGEAVSLENGKIEKIESFGDPVKFAQEFSSISGK-LHIVDLNGAFTGNPANT 62 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + + + + GG +++E S G D I I + +L D ++ ++++ Sbjct: 63 NLIKNIRKNVKSFMQAGGGYRTMESIEAGYSLGIDSIIIGTASL-DKKILEEVSEKHKNI 121 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 I + N Y T+ D+ V+ R A + +N DG Sbjct: 122 TISID------------AYNGYIKYNGWADGTEISYRDFYSMVKGR-ANRFIFTAINSDG 168 Query: 184 VRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + ++ + + +GG +++ + + +GA+ + I I Sbjct: 169 TG------HISRIEKFWDEGYFMYAGGVNSIDDLKK-LENMGFNGAIIGKALYNGNIKIE 221 Query: 243 ELK 245 ELK Sbjct: 222 ELK 224 >UniRef50_A8PRW0 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PRW0_MALGO Length = 576 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 89/376 (23%), Positives = 144/376 (38%), Gaps = 119/376 (31%) Query: 1 MLAKRIIPCLDVR---DGQVV--KGVQFR-------------------------NHEIIG 30 M +RI+ CLDVR DG +V KG + +G Sbjct: 200 MPTRRIVACLDVRSNDDGDLVVTKGESYNVRERQPAEGQAKSTADGTIRSGGKAQVRNMG 259 Query: 31 DIVPLAKRYAEEGADELVFYDITASSD---GRVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 V LA+RY EEGADE+ F +IT+ + G S ++ A I +P V GGI+ Sbjct: 260 KPVELAQRYYEEGADEIAFLNITSFRNWALGDQPMLSLLNVAAATIFVPLTVGGGIRDFT 319 Query: 88 D-----------AAKILSFGADKISINSPALADPTL------------------------ 112 D A GADK+SI S A+ Sbjct: 320 DPDGTFHPALEVAHAYFRAGADKVSIGSEAVYAVEQLLQRATELGDCTGDPCAAPAMALR 379 Query: 113 ----ITRLADRFGVQCIVVGIDTWYD---------------AETGKYHVNQY-------- 145 I ++A ++GVQ +VV +D + G + Sbjct: 380 GDTGIEQIAHKYGVQAVVVSVDPKRVYLSDQEIDGLSDEHSSGDGPVDARTHPHASSIVC 439 Query: 146 ------------------TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + + + + V++ GAGE+++N +++DG G Sbjct: 440 GQDERPETAGQSARWWYMCTVKGGRESRDIDVVQLARGVERLGAGELLINSIDRDGSYAG 499 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD------ADVDGALAASVFHKQIINI 241 +D + + VR ++P+IAS GAG +HF + A ++ ALAA +FH++ ++I Sbjct: 500 FDEKLIDLVRGCVNIPVIASSGAGCADHFCDVLASRPAARGAPIEAALAAGIFHRREVSI 559 Query: 242 GELKAYLATQGVEIRI 257 ++K A G +R+ Sbjct: 560 MDVKKRCADAGYPVRM 575 >UniRef50_A4YI32 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YI32_METS5 Length = 228 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 92/238 (38%), Gaps = 18/238 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +++P +D+ G VK V+ R ++GD + +A+ G + D+ A+ +G+ Sbjct: 1 MKVVPSIDISKGMAVKRVRGREGTGLVLGDPLKIAEELRNMGYTSVHLVDLDAA-EGKGD 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + RV + V GGI+ + LS GA K+ +++ A P R+ + Sbjct: 60 NVEVIERVMKDFS-EISVGGGIRDRSRLERFLSSGATKVVMSTLAFTKPDTFRRVVAGYE 118 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + +V K + + + + + V G ++ + Sbjct: 119 NRVLVSVDYCER-----KVLIKGW-------NESAMSFEEAISHVNSLGVRGVIFTYVCN 166 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +G RNG D E + + + +GG G+++ E A+ + ++ Sbjct: 167 EGTRNGIDPE-IGRYVNLVQGEKGYAGGIGSIQDLQE-LDKMGFHFAIVGMSLYAGVL 222 >UniRef50_Q1D4M2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_MYXXD Length = 238 Score = 152 bits (385), Expect = 9e-36, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 94/238 (39%), Gaps = 17/238 (7%) Query: 7 IPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 IP +D+R+G V+ V + + + K++ G D+ A+ G+ + Sbjct: 4 IPAIDLREGACVQLVGGSYAAEKVRVEEPLEALKQWRRHGFRAFHVVDLDAAL-GKGSNA 62 Query: 64 SWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + ++ + F V GG++ + +LS GA+ + + + A+ D + +A+RF Sbjct: 63 DAIFQLTAYERGLTFSVGGGVRDSDRVETVLSGGAEFVVVGTRAIEDAGWLADIANRFPG 122 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + +VV D T + + + + + G +++ ++++ Sbjct: 123 R-VVVAADVKGR----------EVVTRGWTAGSHRDIREVLAAFEPLPLGGLLVTAVHKE 171 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G +G DL +++V L ASGG TME + + ++ Sbjct: 172 GQLSGVDLPLMREVASTSRHRLYASGGVTTMEDLRALAAAGAYGAVI-GMALYTGRLD 228 >UniRef50_Q7WYR2 Imidazole glycerol phosphate synthase, subunit HisF2 n=3 Tax=Rhizobium RepID=Q7WYR2_RHIL3 Length = 251 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 11/220 (5%) Query: 2 LAKRIIPCLDVRDGQ-VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + KR+IP L V + +VK ++F +GD + + + E+ DE+ DI A+ GR Sbjct: 1 MRKRLIPVLLVDQKRRLVKTIEFGERTYVGDPFNVVRLFNEKEVDEICILDIDATRTGRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D +V +A +P GGI L+ ++ G +K + A + L+ +A Sbjct: 61 PDLGFVRELATECFMPLAYGGGITELKQCEELNRSGVEKFVLGQGA-RNSQLVGAIAADM 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +V +D D +G E +++ +Q G GEI+L Sbjct: 120 GSQALVACVDV--DGRGAAASCYASSGARQ-------EPIEFCLRLQDAGVGEIILQSKT 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 DG RNGYDLE ++ + +P++A GGAG + H +E Sbjct: 171 LDGTRNGYDLELIQSITRKLSIPVVALGGAGDVAHLMEGL 210 >UniRef50_Q6KZD4 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Picrophilus torridus RepID=Q6KZD4_PICTO Length = 222 Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 95/250 (38%), Gaps = 33/250 (13%) Query: 6 IIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 + P +D+ +G+ V R ++ GD V A R+ E D L D+ + + + ++ Sbjct: 4 VYPAIDIYNGRAVFLENGRLERIKVYGDPVYYALRFQEY-FDFLHVIDLNGAIENKRKNR 62 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + + + V GG+++L D + FGA I + + + Sbjct: 63 DVIKNIIKEVKAKVQVGGGLRTLNDVIDVYDFGAYSAIIGTNIDIEVD-----------K 111 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + + ID + D + +T + + + + ++ R + + DG Sbjct: 112 NVTLSIDVYKD----------RVANRGWLNITDNDPVSFYKMLKNR-FSRFIYTNIGSDG 160 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + +K + + I +GG + +A ++ G + ++ I+ GE Sbjct: 161 TN---NSGIPEKFWD--NEYFIYAGGVSGINDVKKALKN-GFSGIIIGRALYENRIDPGE 214 Query: 244 LKAYLATQGV 253 LK +G+ Sbjct: 215 LK--CLQKGL 222 >UniRef50_O33772 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=10 Tax=Sulfolobus RepID=HIS4_SULSO Length = 232 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 98/237 (41%), Gaps = 15/237 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP +D+ G+ VK ++ ++G+ + LA + EG + D+ A+ +G + Sbjct: 3 EIIPSIDISFGKAVKRIRGVRGTGLVLGNPIELANKLYNEGYSRIHVVDLDAA-EGVGNN 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + ++ + ++ V GGI+ +E A +++S + + ++ + L + G Sbjct: 62 EMYIKEICKIGFDWIQVGGGIRDVEKAKRLISLDVNALIFSTIVFTNFNLFYNIVREIGN 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 ++V ID +T + ++ + E +D +++V + I+L + + Sbjct: 122 NRVIVSIDY---DDTKRVLISGWKERS-------MEIIDGIKKVNELELLGIILTYVTNE 171 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 G G D +K ++ +GG + ++ D + F+ I Sbjct: 172 GTVKGIDYS-VKDYAKLIRGVKEYAGGVSSDSDI-TFLKNVGFDYIIVGMAFYLNKI 226 >UniRef50_C7NHA2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NHA2_KYTSD Length = 470 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 89/254 (35%), Gaps = 21/254 (8%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 + R+ P +DVR G + Q + D + +GA+ L D+ + G Sbjct: 1 MPLRLWPAVDVRGG---RTAQVDPDSPLSDPQAAVDHWVAQGAERLHLVDLDRA-TGAGE 56 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + + R+ +P V+GGI S D + LS+GA ++ +S ADP G Sbjct: 57 NDALLERLVRRASVPVEVSGGILSPRDVERALSWGAVAVTTSSALWADPAAALEWLQGCG 116 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V + T + D ++ G VL Sbjct: 117 AEVQV------------GIDLVGDRVVARGTDLALGPVADLWPDLAGLGERRWVLASAAA 164 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG-----ALAASVFHK 236 DG G DL L+ E LIASGG T + V G + + + Sbjct: 165 DGRMTGPDLAGLRAATEHLTGTLIASGGVSTTGDLVAVSSLRGVAGPAVGEVILGAALYA 224 Query: 237 QIINIGELKAYLAT 250 +++G + L Sbjct: 225 GAVDLGRAQRLLGE 238 >UniRef50_Q1PLA2 Putative cyclase hisF n=1 Tax=uncultured Prochlorococcus marinus clone ASNC1363 RepID=Q1PLA2_PROMA Length = 268 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 120/260 (46%), Gaps = 16/260 (6%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYA----EEGADELVFYDITASSDG 58 KRII L + V FR IGD+ L K Y DEL+ D+T Sbjct: 4 KKRIIFTLLYNSNRFVLSRNFRLQT-IGDLDWLKKNYNFDNVAYHIDELLILDVTRGRKD 62 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 V++++E I +P + GGI SLE A GADK+SINS L D +L+T++ Sbjct: 63 SEEFCKVVTQISENIFVPLTIGGGINSLEKAKLFFKSGADKVSINSSLL-DESLVTQIVK 121 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW-ETLDWVQEVQKRGAGEIVLN 177 +G QC+V ID + +Y+V G + + + ++ E ++ GEI +N Sbjct: 122 NYGKQCLVGSIDVLK--KNEEYYVYSNNGTKLVSSLNKFFENKEFFNN-----IGEIYIN 174 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +NQDG NG D+ + V VP I SGG G + +AF+ ++ A + + Sbjct: 175 SINQDGTGNGLDISLAEFVSAKSEVPFIISGGVGKITDIKDAFKYDFINAVSTAHLLNFI 234 Query: 238 IINIGELKAYLATQGVEIRI 257 ++ + + G +R+ Sbjct: 235 GDSLKKTRLICDECG--VRL 252 >UniRef50_C7RAI7 Phosphoribosyl-ATP diphosphatase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAI7_KANKD Length = 412 Score = 146 bits (368), Expect = 9e-34, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 95/242 (39%), Gaps = 27/242 (11%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+ DG+ V+ Q I ++ L + ++ G E+ D+ A+ G+ + Sbjct: 2 LIPSIDLLDGKAVQLQQGDASRKIVEKDNLFELLEEFSLFG--EVAIIDLNAAL-GKGDN 58 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 K+ + ++ + V GGI++ E A + LS GA KI + + D + Sbjct: 59 KALIKQLIKKFSCR--VGGGIRNYETAREYLSSGAKKIILGTSCRED------FVKKLPR 110 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 ++ ID D + + + E+Q E + + ++ Sbjct: 111 SQLIFAIDAKGDDWV----------THGWQSSSDNKVAAMIDELQD-NCSEFLYTQVEKE 159 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G+ G D E++++V + + + +GG ++ + + L + + + Sbjct: 160 GMMQGIDRERIEQVIKQSKIQVTVAGGITDLDDI-KFINKLGANSQL-GMSIYTGKLKLD 217 Query: 243 EL 244 E Sbjct: 218 EA 219 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 48/148 (32%), Gaps = 3/148 (2%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 ++I +D + V + + + ++ L + + +D+ Sbjct: 112 QLIFAIDAKGDDWV--THGWQSSSDNKVAAMIDELQDNCSEFLYTQ-VEKEGMMQGIDRE 168 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 + +V + I VAGGI L+D I GA+ S L + Sbjct: 169 RIEQVIKQSKIQVTVAGGITDLDDIKFINKLGANSQLGMSIYTGKLKLDEAVMACLDFDK 228 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRT 152 + D +TG + Y+ ES Sbjct: 229 APLIPTIVQDVDTGSVLMLAYSTPESLQ 256 >UniRef50_C7LZ82 Histidine biosynthesis protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ82_ACIFD Length = 246 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 92/257 (35%), Gaps = 21/257 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH--EIIGDIVPLAKRYAEEGADELVFYDITASSD-GRV 60 ++ +D+ DG+ V+ Q R GD + + GA D+ + G Sbjct: 1 MELVVAVDLLDGEAVRLRQGRFDAPRRFGDPRRYVEGALDAGARWFHVVDLDRARTPGDR 60 Query: 61 VDKSWVS---RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + V + V GG+++ D A++L GA ++ + + L+ Sbjct: 61 RNADMVGDLIALVREAGGSVEVGGGVRTARDIAELLETGASRVVLGTA------LVEETL 114 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 D + +V +D E V + R L+ + RG +L Sbjct: 115 DELDPEHLVAALDYRRGDEGALEVV-----VSAWERSGGRRLLEASARLFARGVRTQLLT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD----VDGALAASV 233 + +DG+ +G DL + + EV V +IASGG + + + V GA+ + Sbjct: 170 DVGRDGMASGPDLGTYQGLCEVVPVEVIASGGVASADDLAKLAAIRGARGAVWGAVVGTA 229 Query: 234 FHKQIINIGELKAYLAT 250 + E + Sbjct: 230 LLDGSLGFDEALSACRA 246 >UniRef50_A2CB98 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus str. MIT 9303 RepID=A2CB98_PROM3 Length = 266 Score = 143 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 13/260 (5%) Query: 1 MLAKRIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEG----ADELVFYDITA 54 M KRII L D + + FR E+ GD L + Y DEL+ D++ Sbjct: 1 MPKKRIIFTLLYDSQSEHFLLSRNFRVQEV-GDYNWLKENYDFTNLSYYIDELLVIDVSR 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 S + +++ +P GG+ SL+ A + GADK+ +N+ +P LI Sbjct: 60 KKRNSQRFCSMLKKLSSDCFLPIGAGGGLDSLDKAKMLFDSGADKLILNTSVYENPELIK 119 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 L +G Q I+ +D + E G + + + G + + + ++ + + GE+ Sbjct: 120 ALNKFYGQQAIIASVDIKKN-ELGIFDIYTHNGTKKASSLKDYQNI----ICKNEWIGEL 174 Query: 175 VLNMMNQDGVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 LN M +DG GYD LK + P+I +GGAG H +E VD A + Sbjct: 175 YLNSMERDGTGQGYDFNMLKSFTNLNKKHPIILAGGAGKTSHIVEGLLTDGVDACATAHL 234 Query: 234 FHKQIINIGELKAYLATQGV 253 F+ + + + G+ Sbjct: 235 FNFIGDKLAKTRCIAKANGI 254 >UniRef50_Q3JEF8 Histidine biosynthesis n=2 Tax=Nitrosococcus oceani RepID=Q3JEF8_NITOC Length = 235 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 92/259 (35%), Gaps = 38/259 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---------GDIVPL-AKRYAEEGADELVFYDIT 53 +++P LD+ G VV + + + + A +L D+ Sbjct: 1 MQLLPVLDLWGGVVVHARGGQRDSYLPLNSPFAPNSSPLQVVAGLLQWCRFQQLYIADLN 60 Query: 54 ASSDGRVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + G + ++ +A D+ V GG E A++ + G + + + L D Sbjct: 61 -AIMGDGNNHFMIAAIARSYPDLELWVDGGTARHEAVAQLFALGVARPVVGTETLPDLES 119 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + + + + +D A G +++ + G Sbjct: 120 W-QALQSSWPEQLALSMDHRRGAFLGPAGLDRQP---------------------ELWPG 157 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGAL 229 ++ ++Q G + G D L+++ + + L+A+GG +E + V+G L Sbjct: 158 TVIAMSLDQIGSQQGPDWSLLERLGQRSLRKRISLLAAGGVRCLEDLKQ-LAAWGVEGVL 216 Query: 230 AASVFHKQIINIGELKAYL 248 AS H +N EL+ L Sbjct: 217 LASALHDGSLNPAELQQML 235 >UniRef50_Q8ZY14 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Thermoproteaceae RepID=HIS4_PYRAE Length = 229 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 95/238 (39%), Gaps = 19/238 (7%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 IIP +D+ G+ VK ++ + I GD + LA R+ + A + D+ + G +V+ Sbjct: 2 IIPSIDIEGGRAVKRIRGQRGNYIFQGDPLELAARFRK--APLVHVVDLDGAEAGGLVNI 59 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 S +S++AE+++ + GG++SLE + LS + S + L R A+ + + Sbjct: 60 SVISKIAEILEGRCELGGGLRSLEAVERALSL-CQYAVVGSLPFKNWPLFRRAAELYRDR 118 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA-GEIVLNMMNQD 182 V D G+ V + + + V+ +++ G +++ + + Sbjct: 119 LAV-----SLDYRGGEVLVGGWREKAA-------SIAEAVRRLEEAGPYAAVIVTSVEVE 166 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G G + K + + +GG A DG + + + Sbjct: 167 GTGGGVKADIDVKSLKRIARRVFYAGGVRDCNDVERA-YALGFDGVIVGYALYAGDLK 223 >UniRef50_Q4JIN2 Orf17 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN2_9BACT Length = 248 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 85/249 (34%), Gaps = 26/249 (10%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI------------IGDIVPLAKRYAE-EGADELVFY 50 R+I +D+ G+ V R + +GD LA+ Y E G EL Sbjct: 1 MRVIGVIDLAAGRAVHARGGRRTDYAPVRLSGAAAAHVGDPCALARTYLETRGLTELYVA 60 Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 D+ + G + + + + P + G+ S+ A L GA + + L Sbjct: 61 DLD-AIGGGPSQDAAIGALIR-LGAPLWLDSGVHSVPRARHALGLGASFVVVGLETLPSY 118 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 +++ + G + + +D + + G Sbjct: 119 DVLSEICADVGSERVAFSLDLR----------DGLPITAHADVAAGRSVEQIAARAVEAG 168 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 G I++ + + G+ G DL + +R V L+A GG E + A DG L Sbjct: 169 VGAIIVIDVARVGMGEGVDLALISSLRSVAPAVLLAGGGVRGSEDL-ASLAHAGCDGVLV 227 Query: 231 ASVFHKQII 239 A+ H I Sbjct: 228 ATALHDGRI 236 >UniRef50_Q58114 Uncharacterized protein MJ0703 n=8 Tax=Methanococcales RepID=Y703_METJA Length = 226 Score = 139 bits (352), Expect = 7e-32, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 45/255 (17%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYDITA 54 +IIP +D++D V G E + + +AK Y E GA + D+ Sbjct: 1 MKIIPVIDLKDKIAVHGKSGNRDEYKPLESVICKSSNPIEVAKAYKERGAKTIYIADLN- 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED---AAKILSFGADKISINSPALADPT 111 G + + + I V G+KS ED K+L+ D+ + + L D Sbjct: 60 FIMGNGDNFDIIKEID---FINKIVDIGVKSREDLETIKKVLNKD-DRAIVATETLKDIE 115 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 L+ + IVV +D + + E L V++ Sbjct: 116 LLKE-------KDIVVSLDFKNG---------------NLLNYSLDEILSCVRDDTP--- 150 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +++ ++ G + G + E +K V + + P+ GG ME E + VD L A Sbjct: 151 --LIILDISSVGTQRGVNAELIKYVLDKTNNPVYVGGGIKGMEDL-ELCYNLGVDAVLIA 207 Query: 232 SVFHKQIINIGELKA 246 + HK ++++ E+ Sbjct: 208 TAIHKGVLDLEEIIN 222 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 34/76 (44%) Query: 47 LVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 L+ DI++ R V+ + V + + P V GGIK +ED + G D + I + Sbjct: 151 LIILDISSVGTQRGVNAELIKYVLDKTNNPVYVGGGIKGMEDLELCYNLGVDAVLIATAI 210 Query: 107 LADPTLITRLADRFGV 122 + + ++FG Sbjct: 211 HKGVLDLEEIINKFGD 226 >UniRef50_Q4J8J0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J8J0_SULAC Length = 226 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 102/238 (42%), Gaps = 20/238 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +++P +D+ + VK ++ + I+GD + +AK EG D + D+ A+ +G Sbjct: 1 MKVMPSIDISNKVAVKRIRGKGGSGIILGDPLKIAKEIISEGYDAIHIVDLDAA-EGLGD 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +K + ++ + V GG++ LE A IL + I +++ + + ++ G Sbjct: 60 NKDIIKQICTLGFSWTQVGGGVRKLEIAKDILEY-CSSIVVSTLPITNRQEYDKIISGVG 118 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 V + + ID + G + + + V ++ +G ++ + Sbjct: 119 VDKVFLSIDY---DDNGYVLIKGWKEKSVK-----------VSDLLDLESGGVIFTYIPN 164 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +G + G D ++ V+ V + +GG G+++ L+ + D ++ F+ + Sbjct: 165 EGTKGGIDNNVVEYVKSVKKIK-EYAGGIGSLDDLLK-LKSFGFDYSIIGMSFYNGTL 220 >UniRef50_D1SND3 HisA/hisF family protein n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SND3_9EURY Length = 237 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 96/259 (37%), Gaps = 37/259 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYDITA 54 +IIP +D+ + V G E + + +A Y E GA+ + D+ Sbjct: 1 MQIIPVIDLMNKIAVHGKSGNRDEYKPLKSVICNSPNPIDVAMAYKERGAETIYIADLN- 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA--DKISINSPALADPTL 112 G + + + + V G+K ED I DK + + L D L Sbjct: 60 FIMGNGDNFEVIKEID---FVNKIVDIGVKRREDLENIKKILNKDDKAIVATETLKDIEL 116 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + + IVV +D + Y+ D + V + L + Sbjct: 117 LKE-------KDIVVSLDFKNGELLLDKNFKDYSLDGILSYVREDTPLTIL--------- 160 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ G + G ++E +K V + + P+ GG M+ E + VDG L A+ Sbjct: 161 -----DISSVGTQRGINVELIKYVLDKTNNPVYVGGGIKGMDDL-ELCYNLGVDGVLIAT 214 Query: 233 VFHKQIINIGELKAYLATQ 251 HK I+++ E+ + + + Sbjct: 215 AIHKGILDLEEIISKFSDK 233 >UniRef50_Q1IKB1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Acidobacteria RepID=Q1IKB1_ACIBL Length = 228 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 94/242 (38%), Gaps = 23/242 (9%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEI-IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 +IP +D+ G++V+ VQ D +R+ G + D+ A+ + ++ Sbjct: 2 LIPSIDLMGGKIVQLVQGEKKAFETTDFDAWCERF--AGFPMVQLIDLDAAKR-QGDNRE 58 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP----TLITRLADRF 120 ++ + + +P V GG++ + A ++L+ GA ++ + S + D LA+R Sbjct: 59 LIANIV--LRLPCQVGGGVRDADVAERLLAIGAKRVIVGSSYIRDGRVDVDFARGLAERC 116 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G ++ ID+ + + + + G + ++ Sbjct: 117 GTDRVIAAIDSR----------EGFVAVRGWQESVPITAGEMIAALTPY-VGGFLYTHVD 165 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G+ G+ + +++R + LIA+GG + E E VD + + Sbjct: 166 TEGLLVGFPTDIARRLRTLTEKQLIAAGGIRSQEEIDE-LDGIGVDAV-VGMAIYTGKLV 223 Query: 241 IG 242 + Sbjct: 224 VK 225 >UniRef50_UPI0001C41F9C hisA/hisF family protein HisAF n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41F9C Length = 231 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 88/251 (35%), Gaps = 31/251 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYD 51 ML IIP +D+ + V G D + +A GA E+ D Sbjct: 1 ML--EIIPVIDLMNSVAVSGKSGNRETYTPLQTIYASSSDPLEIALSLKSAGAKEMYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + + V V +P + G+ LE +L F A KI + + L Sbjct: 59 LDFIERNGNNNIFKIKEVNSV--LPVILDVGVDKLETFEFLLEF-AYKIIVATETLESIE 115 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + ++ +++ + I+V +D + E + + + + +++ Sbjct: 116 ELGKIFEKYPKERIIVSVDVKNN--------------ELYAKNMDLDLEGFKEVLRRIDP 161 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 EI+L ++ G G++ L+ E +I GG + + AL Sbjct: 162 NEIILLDISSVGTEGGFNKPLLESFEEFKD-KIILGGGIT--PDEISQLDALGIRKALVG 218 Query: 232 SVFHKQIINIG 242 + HK I + Sbjct: 219 TALHKGQIRLN 229 >UniRef50_A8M908 Histidine biosynthesis protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M908_CALMQ Length = 228 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 100/241 (41%), Gaps = 28/241 (11%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE-----IIGDIVPLAKRYAEEGADELVFYDITASS 56 +++ +IP +D+ +G VVK V+ + + + L K Y + D+ + Sbjct: 1 MSRLVIPSIDLSNGLVVKRVRGVKGSELVKLNLNEALSLVKDY-----PFIHVVDLNGAE 55 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 G+ ++ ++++ ++ V GG++ +EDA +L + ++ + + A+ +P L+ + Sbjct: 56 LGKPINVDSIAKIGATVNGRCEVGGGVRVIEDAELLLKY-CSRVVLGTVAVENPALLLNM 114 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 +R GV + V +DT + + R + L + ++ Sbjct: 115 INRLGVDKVAVSLDT----DGEWLMTRGWGVRARRI----MDALSNLPR-----VSAVIY 161 Query: 177 NMMNQDGVRNGY--DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 ++ +G G + E +K++R++ + +GG + E DG + Sbjct: 162 TNVSVEGTGMGPRVNGELVKRLRDI-GKEVYYAGGVSSCSDV-EYLWGLGFDGVIIGYAL 219 Query: 235 H 235 + Sbjct: 220 Y 220 >UniRef50_A5UNR3 ProFAR isomerase-related protein n=3 Tax=Methanobrevibacter smithii RepID=A5UNR3_METS3 Length = 229 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 95/252 (37%), Gaps = 32/252 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYD 51 M+ K +P LD++D V G + V +A + GADEL D Sbjct: 1 MIKK--VPVLDLKDNIAVSGKSGLRDTYTPLQTVFAPSANPVDIANGLSINGADELYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + +G + V V +P + G+K E L + A KI + + + Sbjct: 59 LD-LIEGNGHNIHDVKMV--NSILPVMLDAGVKDFESFTFFLDY-AYKIIVPTETIKSIG 114 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 I ++ +++ + IVV +D + E ++ ++ + +++ Sbjct: 115 EIKKIFEKYPKERIVVSVDVKDN--------------ELYSKNLNISLAEFKEILEELDP 160 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 EI+L + G + GY+ E L +++ LI +GG + D + L Sbjct: 161 DEIILLDITGVGTQKGYNQELLDDFKDLKD-KLIIAGGLNNKS--VSELEDMGIKKVLVG 217 Query: 232 SVFHKQIINIGE 243 + H + + + Sbjct: 218 TALHSGEMKLLD 229 >UniRef50_A6C0W3 HisA/HisF family protein, putative n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C0W3_9PLAN Length = 247 Score = 133 bits (336), Expect = 4e-30, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 78/248 (31%), Gaps = 22/248 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEE-GADELVFYDIT 53 +IIP LD+ + +V+G+ + + +A+ +E G E D+ Sbjct: 1 MKIIPVLDILNQTIVRGIAGQRETYQPIQSGLTHSSQPLDIAQALQDEFGFSEFYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A R+ + + + + G+ D+ + I L P + Sbjct: 61 AILQQRL-NLQMYQCLLDAGFTFL-LDCGLHFAGDSQPLSKMKGITIVAGLETLESPQEL 118 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 +L +G V +D + L+ + ++G + Sbjct: 119 KQLVQNWGAASTVFSLDLKQGKPV-------RNSSSDNPYAAIDDPLEIAELSLQQGVNQ 171 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREV--CHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 ++L + G G E L + + LI GG +++ D L A Sbjct: 172 MILLDLANVGTGQGTGTEALCRTLRSHHPDLRLITGGGIHSIDDLQTQAEQ-GADAVLVA 230 Query: 232 SVFHKQII 239 S H + Sbjct: 231 SALHDGRL 238 >UniRef50_B8HVG9 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamideisomerase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HVG9_CYAP4 Length = 226 Score = 133 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 96/232 (41%), Gaps = 19/232 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 IIP L + +G Q + D V +A+++A +GA L D + G +++ Sbjct: 1 MEIIPALKIMEGFCCHHRQ--PYRFNCDPVAMAEQWANQGATRLHLIDCNGVTTGAMLNL 58 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 ++ + + + +P V G I S + + G D++ ++ ++ L+ L + F + Sbjct: 59 PTIAAIVQQVKVPVQVEGTIYSRAQIETLFAIGVDRVVVD-GSIGWSELVADLCEHFSGK 117 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 +V +A G+ + +T + + GA I+ + + G Sbjct: 118 IMV-----NLEAYDGRVACSG--------ELTGLLATTLAERAEAVGAAGIIYTDIARQG 164 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +L+ LK + + ++P+IA GGA ++ L F + + + + Sbjct: 165 SGI-INLKALKHLADRVNLPIIAGGGASSIAELLRLFNPSTPQ--IVGMMVY 213 >UniRef50_C9RDL3 HisA/hisF family protein n=3 Tax=Methanococcales RepID=C9RDL3_METVM Length = 229 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 97/256 (37%), Gaps = 45/256 (17%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYDITA 54 IIP +D++ V G + D + LAK Y E+G++ + D+ Sbjct: 1 MHIIPVIDIKGNIAVHGKSGMRSKYQPLKSVICETSDPICLAKSYKEKGSEMVYIADLD- 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTL 112 + G + + + + I V GIK+ ED ++ + DK I + L D L Sbjct: 60 AICGEGDNFNLIKNID---FINKIVDAGIKTREDLERVREYLNKNDKAIIATETLIDKEL 116 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 I+ + I+V +D D T E L V++ Sbjct: 117 ISE-------KNIIVSLDFK---------------DGKLLNYTVEEVLGLVRKDTP---- 150 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREV--CHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 +++ ++ G G +++ + + ++ P+ GG + + + +DG L Sbjct: 151 -LIILDISSVGTGRGINMKLINMILKLNKGKNPIYVGGGIRDITDIEKC-YNLGIDGVLV 208 Query: 231 ASVFHKQIINIGELKA 246 + H+ +I++ E+ Sbjct: 209 GTAIHRGVIDLEEVIK 224 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 16/120 (13%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADE-LVFYDITASSDGRVVD 62 K II LD +DG K + + E++G L ++ D L+ DI++ GR ++ Sbjct: 120 KNIIVSLDFKDG---KLLNYTVEEVLG----LVRK------DTPLIILDISSVGTGRGIN 166 Query: 63 KSWVSRVAE--VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + + P V GGI+ + D K + G D + + + + + +F Sbjct: 167 MKLINMILKLNKGKNPIYVGGGIRDITDIEKCYNLGIDGVLVGTAIHRGVIDLEEVIKKF 226 >UniRef50_UPI00016C36C9 phosphoribosylformimino-5-aminoimidazole carboxamide isomerase family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C36C9 Length = 235 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 75/242 (30%), Gaps = 23/242 (9%) Query: 13 RDGQVVKGVQFRNHEI--IGDIV-------PLAKRY-AEEGADELVFYDITASSDGRVVD 62 +G VV+ V + + +A+ GA EL D+ + G Sbjct: 1 MNGVVVRAVGGDRKNYRPVRSPLTPSTVPTDIAQALLRSVGAGELYVADLD-AITGSARV 59 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V + E +P + G D + + P ++ Sbjct: 60 TPSVEALMEACAVPVWLDAG-TGRRDVLDWPPHQNLRPVVGFETCRVPEVLAEALLEPRQ 118 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + + +D G + GD + L + V G +++ + + Sbjct: 119 RPVAFSLDLRNGQLLGNWRAWGLAGDR--------DALALTRRVVDMGVRTLIVLDLARV 170 Query: 183 GVRNGYDLEQLKKV--REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G G ++L +V E + LIA GG T E A G L AS H+ + Sbjct: 171 GTGTGAGTDELVRVIRAEFPDLDLIAGGGVRTWSDV-ERLGKAGATGVLVASALHEGTLV 229 Query: 241 IG 242 + Sbjct: 230 LP 231 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 12/108 (11%) Query: 8 PCLDVRDGQVV-----KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 LD+R+GQ++ G+ D + L +R + G L+ D+ G Sbjct: 123 FSLDLRNGQLLGNWRAWGLAGDR-----DALALTRRVVDMGVRTLIVLDLARVGTGTGAG 177 Query: 63 KSWVSRVAEV--IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 + RV D+ GG+++ D ++ GA + + S Sbjct: 178 TDELVRVIRAEFPDLDLIAGGGVRTWSDVERLGKAGATGVLVASALHE 225 >UniRef50_Q1NTJ9 Histidine biosynthesis n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTJ9_9DELT Length = 186 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 68/123 (55%) Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 G+ + + + ++ GAGEI+LN +++DG +G+DLE +K Sbjct: 62 GPNGEKYCWYQCTVKGGREGRDLDAATLAVACEELGAGEILLNCIDKDGTNSGFDLELVK 121 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 V+E +P+IAS GAG EHF E F D ALAA +FH++ + I E+K +L G+E Sbjct: 122 MVKEAVTIPVIASSGAGKPEHFSEVFTVTGADAALAAGIFHRREVAISEVKEHLQRHGIE 181 Query: 255 IRI 257 +R+ Sbjct: 182 VRL 184 >UniRef50_A8V5Z6 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V5Z6_9AQUI Length = 119 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 3/117 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 L + IIP +D+++G+ V+ + + V +AKR+ E+GA L D+ + +G Sbjct: 3 LKEFIIPAVDIKEGRAVRLYKGDPNAVKVYGDNPVEIAKRWEEKGAKHLHIVDLDGAFEG 62 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + V ++ + +++P GG+++ E K++ G +++ I S A D L + Sbjct: 63 IPKNYKIVEQIVKSVNVPIEFGGGLRTYEAVKKMIEIGVERVVIGSLAYQDKELFEK 119 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 48/105 (45%), Gaps = 5/105 (4%) Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY--DLEQLKKVRE 198 V Y GD + +V ++ + +++GA L++++ DG G + + ++++ + Sbjct: 18 AVRLYKGDPNAVKVYGDNPVEIAKRWEEKGAKH--LHIVDLDGAFEGIPKNYKIVEQIVK 75 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +VP+ GG T E + + V+ + S+ ++ + Sbjct: 76 SVNVPIEFGGGLRTYEAVKKMI-EIGVERVVIGSLAYQDKELFEK 119 >UniRef50_O26765 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase related protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26765_METTH Length = 227 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 88/246 (35%), Gaps = 33/246 (13%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYD 51 ML IIP +D+ DG V G + D V +A GA + D Sbjct: 1 ML--EIIPVIDLMDGIAVSGKSGEREKYRPLESVYSPSPDPVNIALSLRAAGARSIYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + +G + V RV V +P + G++ LE +L F A ++ + + L Sbjct: 59 LD-AIEGTGSNLEAVRRVNHV--LPVILDAGVRDLETFHFMLEF-ASRVVVATETLESTE 114 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + + + VV +D + H + E D + + Sbjct: 115 ELEEILRNYPPERTVVSVDVK----DMRLHSR-------NLEIGLEELRDLLMGYEV--- 160 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +I+L + G +G++ E L+ R + +I GG + + V AL Sbjct: 161 -DIILLDIGSVGTSSGFNRELLELFRPLIE-RVIPGGGV--LPEEIPELEAMGVRAALVG 216 Query: 232 SVFHKQ 237 H+ Sbjct: 217 RALHEG 222 >UniRef50_A3PE78 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus str. MIT 9301 RepID=A3PE78_PROM0 Length = 222 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 12/213 (5%) Query: 45 DELVFYDITASSDGRVVDKSW---VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKIS 101 DE++ +++ + + + +S + +P + G I+S+E+A ++ +FGADKI Sbjct: 15 DEILIINLSEKNWEEAYNNKFFNDISLLLSKTFLPITIGGKIRSIENAKELFNFGADKIL 74 Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 I+ D L+ + D +GVQ IVV D +++ +N S + + + Sbjct: 75 ISRAFFQDQNLLKEIRDLYGVQSIVVQFD--INSQNYDIFINSSLEKVSNLKKIVYSLNE 132 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 K GE+++N +++DG G++ E L + ++ ++PLIASGG G+ H E + Sbjct: 133 ------KNLMGELIINQIDRDGTGFGHNTEYLNAIPKL-NMPLIASGGFGSSIHMAECLK 185 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + +++ + E + L E Sbjct: 186 FDSISAVATSNLLNFIGDAFSEARQELRKMNFE 218 >UniRef50_Q2NEW9 Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NEW9_METST Length = 239 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 87/250 (34%), Gaps = 29/250 (11%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEII-------GDIVPLAKRYAEEGADELVFYDIT 53 M+ IIP +D+ + V G R + + +A E+GA + D+ Sbjct: 1 MIFM-IIPVIDIMHNECVSGKSGRRSTYKKLRSIYGDNPLDIATALKEDGAQLIYIADLD 59 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + + IP + GI S+ED + + + + I Sbjct: 60 KIERIDDNNN---IISSINNIIPVMLDNGISSIEDIENNKNI-CSYNILATETMTSLDNI 115 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + ++ +VV ID + E + D + + K Sbjct: 116 EEIFKKYDSNKLVVSIDIKNN--------------ELLVNNKDIDLEDVIYLINKYKPKY 161 Query: 174 IVLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ ++ G + G + ++++ +++ H +GG + +E + +++ L + Sbjct: 162 TIILNISYVGTKKGVNTNIIEEITKKIPHTKCCIAGGIRNSD--IETYTKKNINNFLIGT 219 Query: 233 VFHKQIINIG 242 + H+ ++ Sbjct: 220 LLHEGNLSYK 229 >UniRef50_C6QGP7 Histidine biosynthesis protein n=3 Tax=Rhizobiales RepID=C6QGP7_9RHIZ Length = 235 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 40/259 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAE-EGADELVFYDIT 53 IIP +DV G+VV+ +Q + + +A+ D+ Sbjct: 1 MDIIPVIDVSRGKVVRAIQGKRAAYLPIETPLAATSEPGDVARGLRSLYPFRRAYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEV---IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 +GR + V +++ ++ G +S A +L+ + + S +L Sbjct: 61 G-IEGRGRNTHLVPELSQALPNTELWIDAGTGSRSA--ARAVLAAPVATLVVGSESLESV 117 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 ++ + V+ +D D G + + Sbjct: 118 RAWHEISAEAPGRT-VLSLDFRGDEFMGP---------------------EALLADAALW 155 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGAL 229 +++ +++ G ++ L+ + + A+GG ++E A GAL Sbjct: 156 PTRVIVMTLDRIASEGGPNIALLETIAARAGGRRVYAAGGIRSLEDLAR-IGKAGAAGAL 214 Query: 230 AASVFHKQIINIGELKAYL 248 AS+ H Q I+ G+LK Sbjct: 215 VASILHAQKISAGDLKEIA 233 >UniRef50_Q603E0 Putative HisA/HisF family protein n=1 Tax=Methylococcus capsulatus RepID=Q603E0_METCA Length = 227 Score = 119 bits (299), Expect = 8e-26, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 73/252 (28%), Gaps = 41/252 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---------GDIVPLAKRYAE-EGADELVFYDIT 53 +IIP LD+ G+VV V+ R D + + + D D+ Sbjct: 1 MKIIPVLDLMQGRVVHAVKGRRENYRPLSSPLCPDADPRAVVEAFRNLYRFDTFYIADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + G ++ + D L G P Sbjct: 61 -ALMGLGCQNELIAALRTAFP-------------DIVFWLDRGL------------PEAG 94 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 D GV ++ + + T + + Q Sbjct: 95 EAALD--GVVPVIGSESLPTVDRLQRMTTRDWILSLDFFDGTLKGCSRLLAQPQCWPERV 152 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVP-LIASGGAGTMEHFLEAFRDADVDGALAAS 232 IV+ +N+ G +G DL+ L +VR + LIA+GG E + L AS Sbjct: 153 IVMT-LNRVGSFDGPDLDLLDRVRRLTPHRALIAAGGVRDAGDL-EILERRGIHAVLVAS 210 Query: 233 VFHKQIINIGEL 244 H + + L Sbjct: 211 ALHSGSLELSRL 222 >UniRef50_Q2FS89 Histidine biosynthesis n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FS89_METHJ Length = 226 Score = 119 bits (299), Expect = 8e-26, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 71/249 (28%), Gaps = 36/249 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII------GDIVPLAKRYAEEGADELVFYDITASSD 57 + D++ G++V G + D + + L D+ Sbjct: 1 MDLYLATDLKSGKIVHGKSGMRDRYVPVTSLHADTAEPIRFIEQMKPRFLYIADLDR-IC 59 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G + +AE + +L G + Sbjct: 60 GTGDHDPLIPELAERTE---------------RILLDRGCKGPY-------------DML 91 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 D FGV IV V + + ++ + ++L Sbjct: 92 DIFGVSMIVGTETAADTLAQFTKGVLSVDIKNDLVIPWNIDPVTFLSTCNRYRFEMVILL 151 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + + G G D E L + REV PL+ GG + E A DGA+ A+ H Sbjct: 152 DIGRVGTGRGLDKEMLSQFREVYTGPLLWGGGVSSEEDL-ALLEKAGFDGAIIATAVHSG 210 Query: 238 IINIGELKA 246 I + ++ Sbjct: 211 KIPVEYIRR 219 >UniRef50_D1JF95 Putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=uncultured archaeon RepID=D1JF95_9ARCH Length = 238 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 87/251 (34%), Gaps = 31/251 (12%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEII-----------GDIVPLAKRYAEEGADELVFY 50 + R+I +D+ DG VV + + + D A+ E+ Sbjct: 1 MDFRLIFVMDLLDGVVVHAKRGEREKYVPIHRFSSIVTSSDP---ARVIETIKPKEVYIA 57 Query: 51 DITASSDGRVVDKSWVSRVA-EVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALA 108 D+ ++ + + D+ + G+K +ED + + ADK + + + Sbjct: 58 DLNR-LLSTGNNRPILKDLRTRNRDLRIMLDYGVKGMEDLKEAVDAEMADKFVLGTETI- 115 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 L+ + + + + + L ++E+ K Sbjct: 116 SIELLEEASKS------------DIITDISISIDLFNNEVLTSDTRMKIDPLRLIKELNK 163 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 ++++ +N+ G ++G D E L + E+ ++ GG E + + V GA Sbjct: 164 FPVRDVIVLELNRVGTKSGIDFEFLARAVELSEHDILCGGGVRNCEDVHKM-AEIGVKGA 222 Query: 229 LAASVFHKQII 239 L A+ H I Sbjct: 223 LVATAIHDGGI 233 >UniRef50_A8TG14 Histidine biosynthesis protein n=1 Tax=Methanococcus voltae A3 RepID=A8TG14_METVO Length = 148 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 + +AK + E GA+ L D+ + DG V+ V ++ + +P + GGI+++ED Sbjct: 3 YDNPDEIAKMWVENGAEMLHLVDLDGAIDGERVNLPMVKKIIQESKVPVQMGGGIRTIED 62 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 ++++ G +++ I + A+ +P + +LA + G + I+V +D GK + + Sbjct: 63 VEELVNLGINRVIIGTVAVQNPDFVEKLAKKVGSEKIMVALDAK----DGKVVIKGW 115 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + + + GA + L ++ +L +KK+ + VP+ GG T+E Sbjct: 5 NPDEIAKMWVENGAEMLHLVDLDGAIDGERVNLPMVKKIIQESKVPVQMGGGIRTIEDVE 64 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 E + ++ + +V + + +L + ++ + + + Sbjct: 65 E-LVNLGINRVIIGTVAVQNPDFVEKLAKKVGSEKIMVAL 103 >UniRef50_B8EIK2 Histidine biosynthesis protein n=2 Tax=Beijerinckiaceae RepID=B8EIK2_METSB Length = 237 Score = 116 bits (290), Expect = 9e-25, Method: Composition-based stats. Identities = 50/264 (18%), Positives = 91/264 (34%), Gaps = 42/264 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP------------LAKRYAEEGADELVFYD 51 +IP +D++DG VV+ R + +A + + D Sbjct: 1 MEVIPVIDLKDGAVVRARLGRREFYA--PIESRLAATSAPGDIVAGLLSLHPFATIYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKI-SINSPALAD 109 + + D R + + + E + F V G+K +A L I + + L Sbjct: 59 LN-AIDARGDHEDVLFSLEEAFPQVEFWVDAGVKDAGEARSWLLRHKRAILVLGTETLGS 117 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + L D + I++ +D + G + + Q Sbjct: 118 SATLEILKDE---ERIILSLDFRGETFIGP---------------------EALLSAQHI 153 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 ++ + + G G DL ++ V+ + + A+GG E A A VDGAL Sbjct: 154 WPSRVIAMTLGRIGANAGPDLSRIASVKALSDRKVYAAGGVRGTEDL-AALDRAGVDGAL 212 Query: 230 AASVFHKQIINIGELKAYLATQGV 253 AS H + EL A + +G+ Sbjct: 213 VASALHDGQLTSQELAAPIMAKGI 236 >UniRef50_Q1H0R8 Histidine biosynthesis n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H0R8_METFK Length = 234 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 88/259 (33%), Gaps = 37/259 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGA-------DELVFYDIT 53 ++IP +D+ +G VV Q + ++ ++ GA L D+ Sbjct: 1 MQVIPVIDLMNGAVVHARQGNRAHYQPIVSNLCNGSEAQEIVGALLGLYPFPALYIADLD 60 Query: 54 ASSDGRVVDKSWVSR-VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + R ++ + +++ + V GI S+ + + + + ++ Sbjct: 61 -AIQCRNDHRTLIHTLLSKHPTLEIWVDAGINSVAKVQRW-QHPRLRPVLGTESIPSIAT 118 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 LA + I + +D G + +QE + Sbjct: 119 WHLLAGACEGRHI-LSLDFTTAGYQG--------------------PSELLQEARHWP-Q 156 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +++ + G G D+++L R L A+GG + R + GAL A Sbjct: 157 HVIIMSLPHVGSHAGPDMDKLTHFRALSPKHHLYAAGGIRDASDL-QLLRKRGIKGALVA 215 Query: 232 SVFHKQIINIGELKAYLAT 250 S H + L++ LA+ Sbjct: 216 SALHNGNLEKSMLQSILAS 234 >UniRef50_A8TGW8 Histidine biosynthesis protein n=1 Tax=Methanococcus voltae A3 RepID=A8TGW8_METVO Length = 181 Score = 114 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 5/142 (3%) Query: 80 AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 GGIK+ E+A+KI G +KIS+NS P+L+T L+ +G Q IV +D + Sbjct: 12 GGGIKTFEEASKIFELGFEKISLNSVLFEKPSLLTELSQSYGSQSIVASVDVKKNLFG-- 69 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 + Y G ++ + + LD+V+ ++ GAGE+++N ++ +G GY+L + ++ Sbjct: 70 -KLKVYNGSKNNSINDKI--LDYVKNLENLGAGELLINSVDLEGTYKGYNLSLINELSNA 126 Query: 200 CHVPLIASGGAGTMEHFLEAFR 221 +PLIA GGA + + F +A + Sbjct: 127 LTIPLIALGGASSTKDFKDALQ 148 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 7/94 (7%) Query: 6 IIPCLDVRDGQVVKGV--QFRNHEIIGD-IVPLAKRYAEEGADELVF--YDITASSDGRV 60 I+ +DV+ K + I D I+ K GA EL+ D+ + G Sbjct: 57 IVASVDVKKNLFGKLKVYNGSKNNSINDKILDYVKNLENLGAGELLINSVDLEGTYKG-- 114 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 + S ++ ++ + IP GG S +D L Sbjct: 115 YNLSLINELSNALTIPLIALGGASSTKDFKDALQ 148 >UniRef50_C0N3H2 Histidine biosynthesis protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3H2_9GAMM Length = 237 Score = 114 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 80/255 (31%), Gaps = 36/255 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---------DIVPLAK-RYAEEGADELVFYDIT 53 +IIP +D+R G VV D+ + ++ D+ Sbjct: 1 MQIIPVIDIRGGIVVHARGGNRDAYSALNSVLTRSTDVFQVVNDILNWYPFEQFYIADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A + + + V F + GI S +D KI I S L +L+ Sbjct: 61 AIEAAKHRPEFYAELVHCFTGTQFWLDAGITSQKDLRLYSKLHNLKIVIGSETLKSLSLL 120 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 R Q +++ +D G + N E T T Sbjct: 121 EIEGAR---QSMILSLDRRGKQLLGAH--NLLHRTELWTEQT------------------ 157 Query: 174 IVLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ ++ G G LE L+ + + + A+GG E + G L AS Sbjct: 158 -IVMDLDVIGANQGPSLEWLQALIAQRPDIEWYAAGGVRNKADL-EQLQKIRAAGTLIAS 215 Query: 233 VFHKQIINIGELKAY 247 H I+ EL+ Sbjct: 216 ALHTGQIDKAELQKI 230 >UniRef50_C4ZG69 APG10 (Albino and pale green 10); 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imid azole-4-carboxamide isomerase n=3 Tax=cellular organisms RepID=C4ZG69_EUBR3 Length = 261 Score = 113 bits (282), Expect = 8e-24, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 95/270 (35%), Gaps = 29/270 (10%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP-----------LAKRYAEEGADELVFYDI 52 PC+D+ +G+ VK + + + GD A Y + G + Sbjct: 1 MEFRPCIDIHNGK-VKQIVGGSLKDRGDFASENFVSEQDSRFYADMYRKSGIKGGHIILL 59 Query: 53 TASSDGRVVDKSWVSRVA-EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + D + +A E V GGI + ++A + + GA + + S D Sbjct: 60 NSVDSEYYEDTKEQAVMALEAYPQGLQVGGGI-TADNAMEFIDAGAAAVIVTSYVFKDGR 118 Query: 112 L----ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + RL D G +V+ + + G+Y++ E LD + Sbjct: 119 INYANLNRLKDTVGSDRLVLDLSCRK--KDGQYYIVTDRWQNFTDEAVTTELLDKLSSY- 175 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD- 226 E +++ ++ +G NG + E + + +P+ +GG + + + R + Sbjct: 176 ---CCEFLVHAVDVEGRVNGIEKELVAMLGSWGRIPVTYAGGVSSFDDL-KCIRQLGQNH 231 Query: 227 -GALAASV--FHKQIINIGELKAYLATQGV 253 S + ++ A+ + + Sbjct: 232 LNVTIGSALDLFGGEMEYDKVIAFCNNKEI 261 >UniRef50_UPI00006DC778 hypothetical protein CdifQ_04001754 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DC778 Length = 164 Score = 113 bits (282), Expect = 8e-24, Method: Composition-based stats. Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 5/158 (3%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI 75 + KG +F++ + L K Y++ GADELVFYDITAS++ R +V++VAE I+I Sbjct: 8 KSCKGKKFKDIVDVDSPEVLGKFYSDCGADELVFYDITASNEERKTSLEFVTKVAENINI 67 Query: 76 PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 PFCV GG+ LED IL GADK+SINS A+ +P LI + +FG QC+V+ ID + Sbjct: 68 PFCVGGGVNKLEDFTDILRKGADKVSINSSAVKNPELIREASLKFGAQCVVLSIDAKKNE 127 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 E + W L+ + +V + G Sbjct: 128 EGSW-----SVYVKGGREKLIWMQLNGLLKVVELGVRR 160 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 1/87 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + GA E+V + LE + KV E ++P GG +E F Sbjct: 23 SPEVLGKFYSDCGADELVFYDITASNEERKTSLEFVTKVAENINIPFCVGGGVNKLEDFT 82 Query: 218 EAFRDADVDGALAASVFHKQIINIGEL 244 + R D S K I E Sbjct: 83 DILRK-GADKVSINSSAVKNPELIREA 108 >UniRef50_B2JX56 Histidine biosynthesis protein n=6 Tax=Burkholderia RepID=B2JX56_BURP8 Length = 264 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 78/258 (30%), Gaps = 21/258 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAE-EGADELVFYDIT 53 ++IP LD+ DG V+ ++ + +A+ A L D+ Sbjct: 1 MQVIPVLDLLDGHAVRAIRGDRANYRPIQSSLCTTSQPLDVARALIATTAACALYVADL- 59 Query: 54 ASSDGRVVDKSWVSRVAEVID----IPFCVAGGIKSLEDAAKILSFGADKISINS--PAL 107 + D S ++ +A D + + G L A + A Sbjct: 60 GAIMSGNADPSTLAALATSSDRSRPLEIWLDAGFADFPSMLAHLERIACAPNAAPKQAAP 119 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 R+ FG + + +D +A+ Y + E D ++ Sbjct: 120 EQAAPGARIVPVFGSESL-RSLDALREADAAGYAPILSLDHRHGQLIAAPELADALRSPA 178 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGGAGTMEHFLEAFRDADVD 226 + IV+ ++Q G G + + V + I +GG +A + Sbjct: 179 SWPSRVIVMT-LDQVGSDAGPNCDTFHHVHAQAGQRMTIGAGGIRHRGDL-DAAARSGAH 236 Query: 227 GALAASVFHKQIINIGEL 244 L AS H + Sbjct: 237 AWLVASALHDGKLEPAAA 254 >UniRef50_D2QYD3 Histidine biosynthesis protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QYD3_9PLAN Length = 251 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 83/250 (33%), Gaps = 19/250 (7%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYA-EEGADELVFYDITA 54 R+IP +D+ G VV+GV R E + +A+ A L D+ A Sbjct: 8 RVIPVIDLLGGIVVRGVAGRRSEYRPLESQVTRSIEPAIVARDLVHATRATALYVADLDA 67 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 G+ + A + V GI S DA + I + + I Sbjct: 68 IQKGQRSLSIYEQMGASGARLWLDV--GIASRADALR-FCAELAHSEIPADLVIGLESIE 124 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 A + + D + + + L+ + G I Sbjct: 125 TAASLV--ELGAMARDELSGSAIFSVDMRAGQLISVAAELASRMPLELASLAVRSGFTRI 182 Query: 175 VLNMMNQDGVRNG-YDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +L ++ GV +G L +++R+ + +I GG + + L A A D L A Sbjct: 183 LLLDLSAVGVASGIPTLALARQLRDAWGSAIEIIVGGGVRSSDDLLAA-SQAGADAVLVA 241 Query: 232 SVFHKQIINI 241 S H + I Sbjct: 242 SAIHSRAIRF 251 >UniRef50_C6XDW4 Histidine biosynthesis protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XDW4_METSD Length = 232 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 78/256 (30%), Gaps = 38/256 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAE-EGADELVFYDIT 53 IIP +D+ + VV + + + + E D L D+ Sbjct: 1 MNIIPVIDLLEHHVVHAKRGERQHYRPIESGLCDSSQPLAITRALLELYPFDTLYIADLN 60 Query: 54 ASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + G+ ++ + + + + G K+ D + I S +L D Sbjct: 61 -AIQGKPAHVDEIALIRQHYPQLRIWLDAGFKNTRDLLPWSGLEVTPV-IGSESLPDIGA 118 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 L V+ +D D G + + + + Sbjct: 119 YQELISE--GVAHVLSLDFRGDRYQGP---------------------EALLDNPRLWPQ 155 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGALAA 231 ++ + G G D +L+++ + L +GG + R+ + GAL A Sbjct: 156 LVIGMTLANVGSNQGPDHARLQQLVGMAQHGKLYGAGGVRDINDLQR-LREQGIAGALVA 214 Query: 232 SVFHKQIINIGELKAY 247 S H I+ ++ Sbjct: 215 SALHSGQISSQDIAHI 230 >UniRef50_Q10184 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=71 Tax=cellular organisms RepID=HIS4_SCHPO Length = 264 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 43/260 (16%), Positives = 91/260 (35%), Gaps = 33/260 (12%) Query: 8 PCLDVRDGQV---VKGVQFRNHEIIGDIVPL------AKRYAEEGADELVFYDITASSDG 58 PC+D+ GQV V G + ++ + V L A+ Y + + Sbjct: 11 PCIDIHQGQVKQIVGGTLGNDADVKTNYVSLKPSSYYAELYKLNHLEGAHVIML------ 64 Query: 59 RVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL----I 113 + ++ A + GGI ++ +A L GA K+ + S D + Sbjct: 65 -GPNCEEAAKTALHTWPGALQIGGGI-NISNAQNWLQEGASKVIVTSWLFPDAQFDLDRL 122 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 ++ + G +VV + + ++ E LD + + E Sbjct: 123 KAISSKIGKDRLVVDVSCRR--KDNRWFAAINKWQVMTAFELNEENLDLLSQY----CSE 176 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTME--HFLEAFRDADVDGALAA 231 +++ + +G+ G D + + K+ E +P +GG ++E ++ VD Sbjct: 177 FLIHAADVEGLCKGIDEDLVIKLGEWVKIPTTYAGGGRSIEDLDLVDKLSKGKVD-LTIG 235 Query: 232 SVF--HKQIINIGELKAYLA 249 S ++ + A+ Sbjct: 236 SALDIFGGVLEFTRVVAWNR 255 >UniRef50_C8S7V0 HisA/hisF family protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7V0_FERPL Length = 223 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 88/253 (34%), Gaps = 43/253 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP----------LAKRYAEEGADELVFYDIT 53 ++ +DV+ G VV G + E + + L + + E D+ Sbjct: 1 MKVYLAVDVKSGLVVWGKSGKRSEYV--PIERVSKVVRNSNLKEFFEELKVKRAYVADLD 58 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 +GR + + + ++ V GG KS+E+A L+ +P A T Sbjct: 59 R-IEGRGSNLEVIDEIGRKVE--LIVDGGFKSVEEA---LNRNF------TPIFATETFD 106 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 R + F + +V +D + ++ + Sbjct: 107 VRKLEGF--ESCMVSVDVKEKLLDASKSFG--------------SLEELLEYLNSLKLKA 150 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +++ ++ G + +D L+K ++ + +I GG E + ++ + G + + Sbjct: 151 VIILPIHSVGTYS-FDFSLLEKALDILNHKIITGGGL-KPEDL-DVVKEMGIYGVIVGTA 207 Query: 234 FHKQIINIGELKA 246 FH+ I+ + Sbjct: 208 FHQGKIDPEIVLR 220 >UniRef50_B2UL06 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=4 Tax=cellular organisms RepID=B2UL06_AKKM8 Length = 261 Score = 110 bits (275), Expect = 5e-23, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 74/250 (29%), Gaps = 31/250 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFR--------NHEIIGD--IVPLAKRYAEEGADELVFY 50 M R PC+D+ G+V + V + D A Y +G Sbjct: 1 MTRFR--PCIDLHGGRVKQIVGGTLTQDGVSLRTNFVSDRGAAWYADLYRRDGLSGGHVI 58 Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA-- 108 + + V GG + E+A + +S GA + + S Sbjct: 59 KL------GPGNDHAAREALAAWPGGLQVGGG-MTPENAEEWISAGASHVIVTSCLFDAE 111 Query: 109 ---DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 + L G + +V+ + +T+ + Sbjct: 112 GTLRMDRLKDLVSAVGAERLVLDLSCRRVQGGWAVA------MNRWQTLTELRVTAETLD 165 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA-FRDAD 224 V E +++ + +G+ +G D E ++ + +P+ +GG ++ E Sbjct: 166 VLAEHCAEFLIHAADVEGLCSGIDRELVEMLGNWRRLPMTYAGGISRIQDIDEIDALSGG 225 Query: 225 VDGALAASVF 234 A S Sbjct: 226 TMDATVGSAL 235 >UniRef50_A7IL67 Histidine biosynthesis protein n=2 Tax=Alphaproteobacteria RepID=A7IL67_XANP2 Length = 235 Score = 110 bits (275), Expect = 5e-23, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 75/261 (28%), Gaps = 42/261 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVP-LAKRYAEEGADELVFYDIT 53 ++IP +D++ G VV + + +A A L D+ Sbjct: 1 MQLIPVVDLKGGYVVHARRGERDSYRPIHTPLAATSAPLDVVAGLLALAPFRTLYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + G+ + + + + V G + + G I + L D Sbjct: 61 -AIAGKGSHGAVIDGLRAAFPRLDLWVDAGEARADQVHARAAQGRGFCVIGTETLPDVAA 119 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + +++ +D G V+ + W + Sbjct: 120 AKDVLA---AGDVILSLDHDAAGPRGPVSVH-------------EDPALWPER------- 156 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCH----VP-LIASGGAGTMEHFLEAFRDADVDG 227 +++ + + G G DL L++ P L A+GG E + G Sbjct: 157 -VIVMTLARVGSGEGPDLAALERTAARADGIGRHPSLYAAGGVRGPEDL-DRLAAMGTAG 214 Query: 228 ALAASVFHKQIINIGELKAYL 248 L AS H I + + Sbjct: 215 VLVASALHDGRIGPDTARRWA 235 >UniRef50_A0B616 Histidine biosynthesis n=1 Tax=Methanosaeta thermophila PT RepID=A0B616_METTP Length = 227 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 38/253 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG-----------DIVPLAKRYAEEGADELVFYDI 52 R I +D+ + +VV V+ D + + + A E+ D+ Sbjct: 1 MRCIFVMDIYNSKVVHAVRGERSRYRSINTFSRVVSTPDPIEIIEILAP---KEVYVADL 57 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 G + + R++ GI +L D + + + Sbjct: 58 NR-LSGSGDNLKTIERISSKAIT--MADIGISTLSDLSLLPE------PTTPVLGTETAS 108 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + ++D ++ IVV ID + + + + L+ ++E+ Sbjct: 109 LDLISDASDLRDIVVSIDMKHR--------------KVISHSGLLDPLELIKEMNDLDLL 154 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 I+L +++ G G D+E L P++ GG + A + V G L A+ Sbjct: 155 GIILLELDRVGTSAGVDIEFLSSAVASSDHPVLVGGGVRGLSDV-HALEEIGVHGVLVAT 213 Query: 233 VFHKQIINIGELK 245 H + + I ++ Sbjct: 214 AVHSRAMPIEMIQ 226 >UniRef50_A2ST44 Histidine biosynthesis protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST44_METLZ Length = 221 Score = 109 bits (274), Expect = 7e-23, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 42/251 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADEL--------VFYDITAS 55 ++I +D+ DG VV G + + E L D+ Sbjct: 1 MKVILAMDLMDGYVVHGKSGNRDHY--KPLTWGLSPSAEPLSYLSVMKPKYAYVADLDRI 58 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 ++ + + + I + L A+ I + P Sbjct: 59 GMCGDHTETILRLASIPEKLWVDRGCSI-----PEEYLPGVAN--IIGTETADAP--FEE 109 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + D + GK + + ++ ++E K I+ Sbjct: 110 FTGGY----------LSVDVKDGKVIPDG------------LDPVEVIREADKYAFDGII 147 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 L ++ G +G DL+ K++R PL+ GG T++ DA DG + ++ H Sbjct: 148 LLNISSVGTESGIDLDFAKRIRAATKKPLLYGGGVNTLDDL-RTLCDAGYDGVIISTSVH 206 Query: 236 KQIINIGELKA 246 K I + ++ Sbjct: 207 KGKIPVEIVQE 217 >UniRef50_B7GE60 Predicted protein n=11 Tax=cellular organisms RepID=B7GE60_PHATR Length = 279 Score = 109 bits (273), Expect = 8e-23, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 84/283 (29%), Gaps = 45/283 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG-------------------------DIV-PLAK 37 + PC+D+ GQ VK + A+ Sbjct: 1 MKFRPCIDLHHGQ-VKQIVGSTLRFTSPTTDHDDDTVTASSVPELATNFATERPAREFAE 59 Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA 97 RYA +G + + V GG+ +A + L GA Sbjct: 60 RYARDGLTGGHVILL------GPGNADAARAALRAAPGTLQVGGGVHDA-NAREWLDAGA 112 Query: 98 DKISINSPALAD----PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + + S ++ + RL G + +V+ + + Y Sbjct: 113 SHVIVTSHVFSNGQIAMDRLERLVQLIGKERLVLDLSCRKRPDDHNNGPY-YVVTNQWQV 171 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 T++ E +++ ++ +G++ G L+ L + VP+ +GG ++ Sbjct: 172 FTEYAVTTESLRTLAAYCDEFLVHGVDVEGLQCGI-LDDLVTLLATSPVPVTYAGGVRSI 230 Query: 214 EHF--LEAFRDADVDGALAASVF--HKQIINIGELKAYLATQG 252 + +E VD S + ++ A+ + Sbjct: 231 DDLNRVEQLGQGKVD-CTVGSALDIFGGSLPYADVVAWHHQRN 272 >UniRef50_O82782 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic n=33 Tax=cellular organisms RepID=HIS4_ARATH Length = 304 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 89/262 (33%), Gaps = 35/262 (13%) Query: 8 PCLDVRDGQVVKGVQFRNHEIIGD--------------IVPLAKRYAEEGADELVFYDIT 53 PC+D+ G+ VK + + + AK Y E+G + Sbjct: 48 PCIDIHKGK-VKQIVGSTLRDLKEDGSVLVTNFESDKSAEEYAKMYKEDGLTGGHVIMLG 106 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA----D 109 A + + + + V GGI S E+ + GA + + S D Sbjct: 107 A---DPLSQAAAIGAL-HAYPGGLQVGGGINS-ENCMSYIEEGASHVIVTSYVFNNGKID 161 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + G Q +++ + + G+Y + + + ++L+++ Sbjct: 162 LERLKDIVSIVGKQRLILDLSCRK--KDGRYAIVTDRWQKFSDVILDEKSLEFLGGFSD- 218 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD--VDG 227 E +++ ++ +G + G D E + + +P+ +GG M+ VD Sbjct: 219 ---EFLVHGVDVEGKKLGIDEELVALLGNYSPIPVTYAGGVTVMDDVERIKDAGKGRVD- 274 Query: 228 ALAASVF--HKQIINIGELKAY 247 S + ++ A+ Sbjct: 275 VTVGSALDIFGGNLPYKDVVAW 296 >UniRef50_Q6R3H4 Conserved protein n=1 Tax=Methylosinus sp. LW2 RepID=Q6R3H4_9RHIZ Length = 230 Score = 107 bits (267), Expect = 4e-22, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 81/252 (32%), Gaps = 39/252 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRY-AEEGADELVFYDIT 53 ++IP +D+R+G V+ V D + +A+ + + D+ Sbjct: 1 MQVIPVIDIRNGVAVRAVAGDRKNYAPLTTPLAATSDPLDVARGLMTLHPFEAIYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A S + + + G L GA + + Sbjct: 61 AIERRGNNRTSIAAIAKAIAPARLWLDAGFT------GALEVGAWR------------SL 102 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + FG + + D A+ ++ ++ + + Sbjct: 103 ENVDPVFGSETLQESDDLR--ADKHAILSLDFSTRSFLGDPRLYDDESFWPD-------R 153 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +++ +++ G + G D+ + V + A+GGA ++ L ++A GAL A+ Sbjct: 154 LIVMTLSRVGAKQGPDVSRFYDVAARAGSRQVCAAGGARGLDDLL-VLKEAGAAGALVAT 212 Query: 233 VFHKQIINIGEL 244 H+ + L Sbjct: 213 ALHEGRLTPANL 224 >UniRef50_O29545 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (HisA-1) n=1 Tax=Archaeoglobus fulgidus RepID=O29545_ARCFU Length = 223 Score = 106 bits (266), Expect = 6e-22, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 79/253 (31%), Gaps = 43/253 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI----------IGDIVPLAKRYAEEGADELVFYDIT 53 ++ +D++ G+VV G D K E L D+ Sbjct: 1 MKVFFVVDIKSGKVVAGKGGERESYPPITAISRLVSSD--DALKVIEEIKPRFLYAADLD 58 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 G + S +S++++ ++ G +S E+ K+ + + L Sbjct: 59 RIV-GLGDNFSLLSKLSKRVE-ELIADCGFRSPEELEKL----PFTPVVGTETFDITQL- 111 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + V +D + + V+ + Sbjct: 112 --------DRKCYVSLDFKEKFLDASGKFESW--------------EEVVKFLNSFDLYG 149 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +++ ++ G DL L K E+ P++ GG +E E ++ G L A+ Sbjct: 150 LIVLPIHAVGAMK-PDLSVLTKTLELSEHPVMLGGGISGVEDL-ERLKEMGCSGVLVATA 207 Query: 234 FHKQIINIGELKA 246 HK I + ++ Sbjct: 208 VHKGKIPLDVVRK 220 >UniRef50_A2SJ37 HisA/HisF family protein, putative n=3 Tax=Burkholderiales RepID=A2SJ37_METPP Length = 273 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 87/254 (34%), Gaps = 43/254 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGA-DELVFYDIT 53 IIP +D+ DGQVV+ V+ D +A+R E A D L D+ Sbjct: 1 MHIIPVIDLLDGQVVRAVRGERRHYRAIASALCGSADPRIVARRLCEHCATDTLYLADLN 60 Query: 54 ASSDGRVVDKSWVSRVAE-VIDIPFCVAGGIKSLEDAAKILS----FGADKI--SINSPA 106 + GR W+ + + D+ + G +DAA +L+ A ++ S + Sbjct: 61 -ALQGRPPQLEWLRTLLQDRPDLALWLDAGFSGPDDAAHLLARLEPTAAARVTPVYGSES 119 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 L + ++ +D A V E+ Sbjct: 120 LRSRETLAACFA--PPSRALLSLDHRQGAPLDPAGVW---------------------EL 156 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADV 225 + +++ +++ G G DL+ L V H LI +GG L A + A Sbjct: 157 PAQWPRRLIVMTLSRVGSDGGPDLDTLAAVRARAPHAQLIGAGGVRDAA-DLAAAQAAGA 215 Query: 226 DGALAASVFHKQII 239 L AS H + Sbjct: 216 HAWLVASALHDGRL 229 >UniRef50_A3ZZD2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase related protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZD2_9PLAN Length = 244 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 82/253 (32%), Gaps = 33/253 (13%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYA-EEGADELVFYD 51 + I+P +D++D VV+GV +A ++ D Sbjct: 1 MPPVILPVIDLKDRHVVRGVGGLRRRYRPIESKLCASSKPGDVAAAMVTAYSFEDAYVAD 60 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF----GADKISINSPAL 107 + A DGR + W ++AE + + G+ +L D +++ + + L Sbjct: 61 LDAILDGRPQVEDW-RKIAEA-GLRLHLDAGLATLADCQRVIEVLARENVASVIVGLETL 118 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + ++A FG + + ++ G R + Q Sbjct: 119 RRWEDLEQIAAEFG--------------DDVTFSLDLRHGRPLRIVGAAIRPEEVAQRAF 164 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQL-KKVR-EVCHVPLIASGGAGTMEHFLEAFRDADV 225 + G IVL + G G E L +++ ++ V I GG T Sbjct: 165 ECGVRRIVLLDLAHIGQGRGTGTEMLCRELSTQLAGVEWITGGGMQTSADIAAQL-AIGA 223 Query: 226 DGALAASVFHKQI 238 L +S H+ Sbjct: 224 SRVLVSSALHEDE 236 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 5/99 (5%) Query: 20 GVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWV-SRVAEVI-D 74 R I+G +A+R E G +V D+ GR + ++ + Sbjct: 141 LRHGRPLRIVGAAIRPEEVAQRAFECGVRRIVLLDLAHIGQGRGTGTEMLCRELSTQLAG 200 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + + GG+++ D A L+ GA ++ ++S D ++ Sbjct: 201 VEWITGGGMQTSADIAAQLAIGASRVLVSSALHEDEKIL 239 >UniRef50_C6WWE3 Histidine biosynthesis protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWE3_METML Length = 254 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 83/255 (32%), Gaps = 35/255 (13%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDI-VPLAKRYAEEGADELVFYDIT 53 +IIP +D+ +G VV + H + +A A +L D+ Sbjct: 1 MQIIPVIDLLNGIVVHAKKGERHRYQAITSALTPSSEPLAIVAALLALHPFQQLYIADLN 60 Query: 54 ASSD-------GRVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 A + + ++ +A+ ++ V GI +L + Sbjct: 61 AIQKLGNTQDCTQSNNFDVIASIAQHYPNLTLWVDAGISNLTELDLWSQLN--------- 111 Query: 106 ALADPTLITRLADR--FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 + P L ++ + G + V + +++ T T ++ + Sbjct: 112 LSSQPDLSSQAGVKLILGSENFVSMEQYLAI----YHVISEQTILSLDFMPTGYQGPQAL 167 Query: 164 QEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRD 222 E +++ + G G +L+ L + + L A+GG + + Sbjct: 168 LESTAYWPQAVIIMSLAHVGANQGVNLQLLTQTQAKAGDFNLYAAGGVRDIADL-NTLKS 226 Query: 223 ADVDGALAASVFHKQ 237 + GAL A+ H + Sbjct: 227 LGIHGALIATAIHSK 241 >UniRef50_Q0G4J3 HisA/HisF family protein, putative n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G4J3_9RHIZ Length = 237 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 47/254 (18%), Positives = 89/254 (35%), Gaps = 45/254 (17%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEII---------GDIVPLAKRYA-EEGADELVFYDI 52 A ++IP LD+ +G VV+G R + V +A+ G D + D+ Sbjct: 7 AMQLIPVLDLMNGLVVRGEGGRRESYRPIETPLADGAEPVAVARGLIGATGTDVMYVADL 66 Query: 53 TASSDGRVVDKSWVSRVAEVI-DIPFCVAGGIKSLE---DAAKILSFGADKI--SINSPA 106 + G + + E D+ F V G ++++ ++ GA +I + Sbjct: 67 D-AIMGGEAQVPVLQALGEAFPDLRFWVDAGFQTIDAAEALIAAVALGAGRIVPVFGTET 125 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 L + + R+ V+ +D Y G + + D Sbjct: 126 LDETEALARM-----DGPAVLSLDF---------GAEGYRGSPALLEGAELWPAD----- 166 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADV 225 +V+ + G G D ++L+++ + A+GG +A V Sbjct: 167 -------VVVMSLAAVGSSGGPDFQRLEEIVARAGTRRVHAAGGVRGRTDL-DALAAMGV 218 Query: 226 DGALAASVFHKQII 239 GAL AS H + + Sbjct: 219 AGALVASALHNRRL 232 >UniRef50_Q7UQJ1 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UQJ1_RHOBA Length = 272 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 72/248 (29%), Gaps = 37/248 (14%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEI------IGDIVPLAKRYAEEGADELVFYDIT---AS 55 R+I +D++DG V G+ + D L Y G D+ + Sbjct: 29 RLIGVIDLKDGVAVHGIAGNRSQYQPIAGLSADECSLLHWYRSIGIRRFYVADLNGLMGT 88 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVA--GGIKSLED--AAKILSFGAD----KISINSPAL 107 R + V+ + + + G I ++ +++ A+ + I + Sbjct: 89 GRQRDALLALVTEIRQEETLWIDSGWTGSISRMDQEWLSRMNRSIANESNLRWIIATETA 148 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + R+ + + + +D G +WV Sbjct: 149 DSLDVQDRMLEFVNSSNLTLSLDFRAGQFVGP-----------------ETASNWVLAAL 191 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQL--KKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 KR E +L + G +G ++ V + I GG ++ Sbjct: 192 KRNIREGILLDVASVGSESGPASGEMFSDCVSRFGDMSWITGGGIRNVKDV-RGLVSEGY 250 Query: 226 DGALAASV 233 L AS Sbjct: 251 SAFLVASA 258 >UniRef50_Q6R3G3 Conserved protein n=1 Tax=Methylomonas sp. LW13 RepID=Q6R3G3_9GAMM Length = 227 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 77/265 (29%), Gaps = 59/265 (22%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP--------------LAKRYAEEGADELVF 49 +IIP +D++DG VV V + + Sbjct: 1 MQIIPVIDLKDGLVVYAAGGDRSRY--QPVHYTSSICESSEISNVVTSLLKLYPFPKFYI 58 Query: 50 YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADK--ISINSPAL 107 D+ + G+ + + + + L G+ +++ + A Sbjct: 59 ADLD-AIGGQGNHDEAIDNL-------------FRQYPNKEFWLDKGSSYQALTMTNRAS 104 Query: 108 ADPTLITRLADRFG----VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 +I + R +++ +D ++ G + T Sbjct: 105 NCKPVIGTESQRLPISLKNTDLILSLDFKHNQVLGH---PGWLDSPELWPETN------- 154 Query: 164 QEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRD 222 V+ ++ G G D +L ++ + +A+GG ++ + + Sbjct: 155 -----------VVMTLDLVGSNQGPDFAKLSRLCQDHPDKHFVAAGGVRNVKDLMR-LKT 202 Query: 223 ADVDGALAASVFHKQIINIGELKAY 247 + L AS H I+ L+ + Sbjct: 203 IGITAVLLASALHNGSIDAAMLEKF 227 >UniRef50_C1ZC07 HisA/hisF family protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZC07_PLALI Length = 296 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 82/283 (28%), Gaps = 61/283 (21%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII---------GDIVPLAKRYAE-EGADELVFYDITAS 55 ++P +D R+G V + LA+ ++ L D+ Sbjct: 23 VVPVIDTRNGWAVHAIAGNRALYRPWTDSFQQPRKPQQLAEEFSRVWQPRWLYVADLDGI 82 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 DG+ SW + I G + ++D ++ G + + + + +L + Sbjct: 83 IDGQPQTSSWPCLPGDGPRILMDA--GFREIDDVLTAVNLGYE-VILGTESLPSMAWLQE 139 Query: 116 LADRF-GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 L R Q + + +D ++ Q D++ ++ Sbjct: 140 LIVRLEDSQRLWISLDFRQGQ------------WQAPAEFQQLGLTDFISQLSNWSMTHW 187 Query: 175 VLNMMNQDGVRNGYDL--------EQLKKVREVCHVP----------------------- 203 ++ + G G E L+K P Sbjct: 188 IVLDLADVGQGTGGSTAEQIRLLRETLEKSSRNWKHPAESYQSRLAQSCQHGTQVVPTER 247 Query: 204 ---LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 ++A GG T + L+ + V G L A+ I + Sbjct: 248 TPTILAGGGMRTAQDVLQ-LQTQGVSGVLVATALMTGTITPDQ 289 >UniRef50_P40545 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=25 Tax=Dikarya RepID=HIS4_YEAST Length = 261 Score = 99.5 bits (247), Expect = 9e-20, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 81/245 (33%), Gaps = 37/245 (15%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPL-----------AKRYAEEGADELVFYDIT 53 + I C+D+ +G+V + V D+ AK Y + + Sbjct: 3 KFIGCIDLHNGEVKQIVGGTLTSKKEDVPKTNFVSQHPSSYYAKLYKDRDVQGCHVIKL- 61 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA----- 108 + + V GGI + + L + A K+ + S Sbjct: 62 -----GPNNDDAAREALQESPQFLQVGGGIND-TNCLEWLKW-ASKVIVTSWLFTKEGHF 114 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET-LDWVQEVQ 167 + RL + G IVV + + +T E D +E++ Sbjct: 115 QLKRLERLTELCGKDRIVVDLSCRKTQDGRWI-----VAMNKWQTLTDLELNADTFRELR 169 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC----HVPLIASGGAGTMEH--FLEAFR 221 K E +++ + +G+ G D + K+ E + ++ +GGA +++ ++ Sbjct: 170 KY-TNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELS 228 Query: 222 DADVD 226 VD Sbjct: 229 HGKVD 233 >UniRef50_Q46DH4 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=4 Tax=Methanosarcinaceae RepID=Q46DH4_METBF Length = 244 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 86/261 (32%), Gaps = 36/261 (13%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI-----------IGDIVPLAKRYAEEGADELVFYDI 52 R++ +D+ + VV + D V + + E+ D+ Sbjct: 2 FRVVFVMDIFNRNVVLAKGGIREKYRPVSDSSTVCSSSDPVDIVELLHP---REVYIADL 58 Query: 53 TASSDGR--VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 D + + V+ D GI + +D K LS A+ I + Sbjct: 59 NVLQDKGYLETNVDVIREVSLKADTMLDF--GISASQDVEKALSI-AETAVIGTET-GTL 114 Query: 111 TLITRLADRFGVQ-CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + I A +G I V ID + + V+ + Sbjct: 115 SAIKDAA--YGNSGRISVSIDIK------------HGKVLKNDPELPESPFEIVKLLNNL 160 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 +++ +++ G +G+D E L+K+ E ++ +GG M + GAL Sbjct: 161 PLKDLIFLDLDRVGTASGFDPEFLRKLVECSRHSVLLAGGVKDMGDLF-TLDKLGIKGAL 219 Query: 230 AASVFHKQIINIGELKAYLAT 250 A+ H ++ + + L + Sbjct: 220 VATAVHSGLVPPAVMSSGLKS 240 >UniRef50_B1LZS6 Histidine biosynthesis protein n=10 Tax=Alphaproteobacteria RepID=B1LZS6_METRJ Length = 243 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 80/247 (32%), Gaps = 39/247 (15%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII---------GDIVPLAKRYAEE-GADELVFYDITAS 55 +IP LD+R G+VV+ + +A+ + A L D+ A Sbjct: 16 VIPVLDLRGGRVVRARRGERSSYAPIETPLAKGSAPDAVARGLRDAWPAAILYVADLDAI 75 Query: 56 SDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 D D + +A + V G L+ G + I S + AD L+T Sbjct: 76 IDRAAPDLRALEAIARACPGVSLWVDAGFAEPAAVDAFLASGLGRPVIGSESQADADLVT 135 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 RL V +DT G ++ W + + GAG Sbjct: 136 RL-----GDRAVFSLDTRGAERLGPAALH--------DDPALWPPEVIAMTLAQVGAGA- 181 Query: 175 VLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 G DL L + L A+GG + A R A + GAL AS Sbjct: 182 ------------GPDLGALGALRARAPDRRLYAAGGVRGPDDL-RALRAAGIAGALVASA 228 Query: 234 FHKQIIN 240 H ++ Sbjct: 229 LHDGTLS 235 >UniRef50_D2MLS1 TIM-barrel protein, nifR3 family n=1 Tax=Bulleidia extructa W1219 RepID=D2MLS1_9FIRM Length = 234 Score = 89.1 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 56/147 (38%), Gaps = 8/147 (5%) Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE-----TLDWVQEVQ 167 ++ + D + K V+ + T W+ ++ + ++ Sbjct: 12 FKKIIKSHAGS--YLLQDPRQAQKVAKAVVDHSKKPVTVKIRTGWDHQHKNAVEVAKVLE 69 Query: 168 KRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + G I ++ + + +G DLE +K+V++ +P+I +G T+E + VD Sbjct: 70 EAGVSAITIHGRTKSQMYSGTVDLEMIKQVKQAVSIPVIGNGDIKTVEDGKRMLEETGVD 129 Query: 227 GALAASVFHKQIINIGELKAYLATQGV 253 + + + E+ A+L + Sbjct: 130 AIMIGRGLLGRPYFMSEMVAFLNGEEF 156 Score = 78.4 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 3/111 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIP 76 VK +H+ + V +AK E G + + T S VD + +V + + IP Sbjct: 48 VKIRTGWDHQ-HKNAVEVAKVLEEAGVSAITIHGRTKSQMYSGTVDLEMIKQVKQAVSIP 106 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIV 126 G IK++ED ++L G D I I L P ++ + + + Sbjct: 107 VIGNGDIKTVEDGKRMLEETGVDAIMIGRGLLGRPYFMSEMVAFLNGEEFI 157 >UniRef50_C4Z9Z2 Imidazole glycerol phosphate synthase subunit HisF, putative n=3 Tax=Clostridiales RepID=C4Z9Z2_EUBR3 Length = 427 Score = 89.1 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 85/228 (37%), Gaps = 16/228 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 K I+ L +++GQ VK + ++GD+ L + Y + G D+++ +D++ D + Sbjct: 5 KNIVATLYLKNGQAVKSAS--DMTVMGDVYNLCQLYNDSGIDKIIIFDLSTDDDEHEKNI 62 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + IDI C G I +ED K+L G ++ N+ + L +++FG Sbjct: 63 HTIENINRNIDIKVCAGGNINRIEDVKKLLYAGCLQVIFNATKDSSLELANVASEKFGKD 122 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 I++ I Y E +D + ++ L Sbjct: 123 KILLSIS------NVDYIFKHQEEIEDTFHELLVLNIDIIDALEN-------LTSTPYVV 169 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTME-HFLEAFRDADVDGALA 230 +D++++ V + + IA E + G L Sbjct: 170 YMPQFDMDKIIDVMKRETLRGIAGEFINDPENDIMALKTKLSDGGILV 217 >UniRef50_A9NE09 tRNA-dihydrouridine synthase n=2 Tax=Mollicutes RepID=A9NE09_ACHLI Length = 336 Score = 88.8 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 5/136 (3%) Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 Q I + + + V +G +S + ++ + ++K GA I ++ + Sbjct: 122 PQKIYDIVKAIKEKVSKPVTVKIRSGWDSES----VNAVEVAKMIEKAGASLITVHARTR 177 Query: 182 DGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G DL+ +K V+E +P+I +G + D + Sbjct: 178 AQGYSGEPDLDVIKAVKEAVSIPVIGNGNIVDGKSAKHMLEYTGCDAVMIGRASLGNPWI 237 Query: 241 IGELKAYLATQGVEIR 256 E+ AYL + +R Sbjct: 238 FREINAYLNGEETPVR 253 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 3/112 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + E + + V +AK + GA + + T + D + V E + IP Sbjct: 142 VKIRSGWDSESV-NAVEVAKMIEKAGASLITVHARTRAQGYSGEPDLDVIKAVKEAVSIP 200 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVV 127 G I + A +L G D + I +L +P + + + V Sbjct: 201 VIGNGNIVDGKSAKHMLEYTGCDAVMIGRASLGNPWIFREINAYLNGEETPV 252 >UniRef50_Q3AZ67 Dihydrouridine synthase TIM-barrel protein nifR3 n=24 Tax=Cyanobacteria RepID=Q3AZ67_SYNS9 Length = 356 Score = 86.4 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 56/153 (36%), Gaps = 17/153 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S + DP L T++ + DA + V G + + + W Sbjct: 138 GSGLIRDPNLATQILEAV------------VDAVSIPVTVKTRLGWCGSSS----DPITW 181 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 +++Q GA + L+ ++ G + + +V++ +P+IA+G + L Sbjct: 182 CRQLQNAGAQMLTLHGRTREQGFKGQANWNAIAEVKQALTIPVIANGDINSPTDALRCLE 241 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVE 254 DG + +G+++A + + Sbjct: 242 ITGADGVMVGRGTMGSPWLVGQIEAAFMNRPIP 274 Score = 80.7 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 2/104 (1%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLE 87 D + ++ GA L + T + + + ++ V + + IP G I S Sbjct: 175 SSDPITWCRQLQNAGAQMLTLHGRTREQGFKGQANWNAIAEVKQALTIPVIANGDINSPT 234 Query: 88 DAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 DA + L GAD + + + P L+ ++ F + I D Sbjct: 235 DALRCLEITGADGVMVGRGTMGSPWLVGQIEAAFMNRPIPATPD 278 >UniRef50_D2MIW0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIW0_9BACT Length = 104 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 41/104 (39%), Gaps = 1/104 (0%) Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 T V++ + +++ ++ +++DG+ G ++ L+ VPLIAS Sbjct: 1 MHGWTNVSESTAEPVLASLKEYPLAGVIFTEISRDGMLEGPNVAALRDAVRASPVPLIAS 60 Query: 208 GGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELKAYLAT 250 GG +E R + G + ++ +++ A Sbjct: 61 GGVTRVEDIRAIKRLGQKIIGVIVGKALYEGTLDLPAALAEARA 104 >UniRef50_C2D6C5 Possible tRNA-dihydrouridine synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6C5_9ACTN Length = 390 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 37/116 (31%), Gaps = 1/116 (0%) Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVR 197 + V + ++ + +Q GA + ++ + G + E +K+V Sbjct: 159 EVRVPVTCKIRRGYYMDHESAAEFGRALQDAGASALAVHGRFAKQLYKGEANWESIKRVV 218 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 E +P+IASG + E L A + + + + Sbjct: 219 EAVDIPVIASGDVMSAEDACRILYKTQAHAVLIARGTYGNPWIFDDALKIFNKKKL 274 Score = 67.2 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 35/103 (33%), Gaps = 2/103 (1%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 + + GA L + A + + RV E +DIP +G + S Sbjct: 175 DHESAAEFGRALQDAGASALAVHGRFAKQLYKGEANWESIKRVVEAVDIPVIASGDVMSA 234 Query: 87 EDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 EDA + A + I +P + F + +++ Sbjct: 235 EDACRILYKTQAHAVLIARGTYGNPWIFDDALKIFNKKKLLLK 277 >UniRef50_D0U4P6 tRNA-dihydrouridine synthase n=2 Tax=uncultured SUP05 cluster bacterium RepID=D0U4P6_9GAMM Length = 324 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 3/162 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + L FGAD I IN A +V +A + Sbjct: 85 AQQALKFGADIIDINMGCPAKKVCNKAAGSALMQDEALVKS--ILNAVVSAVDIPVTLKM 142 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 + V+ + ++ G + ++ ++ G + + +K V+ +P+IA+ Sbjct: 143 RTGWNVSNKNAPTIAKIAEEAGIQMLSVHGRTREDKYTGMAEYDTIKAVKSQVGIPVIAN 202 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G + + + DG + I E+ YL Sbjct: 203 GDITSAKKAQSVLQYTGADGVMVGRATQGNPWIIHEIDHYLK 244 Score = 64.1 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 6/161 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K N +AK E G L + T + + + V + IP Sbjct: 141 KMRTGWNVSNKNAP-TIAKIAEEAGIQMLSVHGRTREDKYTGMAEYDTIKAVKSQVGIPV 199 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD--RFGVQCIVVGIDTWYD 134 G I S + A +L GAD + + +P +I + + G + + ++ Sbjct: 200 IANGDITSAKKAQSVLQYTGADGVMVGRATQGNPWIIHEIDHYLKTGQKATDIPLNVKKQ 259 Query: 135 AE-TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 ++ + G++ T++++ + + ++ A Sbjct: 260 TILDHIKQIHAFYGEKLGTQLSRKHIFWYATHLDEKNAQTF 300 >UniRef50_C7RGQ7 TIM-barrel protein, nifR3 family n=4 Tax=Anaerococcus RepID=C7RGQ7_ANAPD Length = 326 Score = 84.1 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 44/108 (40%), Gaps = 1/108 (0%) Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVP 203 ++ + ++ G ++L+ + +G + + ++K++E +P Sbjct: 137 NVKIRMGIDDDSVNYIEVGKALEDSGIDYVILHGRTRKQQYSGKANWQAIRKLKETLSIP 196 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +IA+G +++ + + + DG + A ++K Y+ + Sbjct: 197 VIANGDVFSVKDYKDILDETGADGVMIARGAMGNPFIFRQIKDYIQGK 244 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 3/103 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIP 76 VK + + + + K + G D ++ + T + + ++ E + IP Sbjct: 138 VKIRMGIDD-DSVNYIEVGKALEDSGIDYVILHGRTRKQQYSGKANWQAIRKLKETLSIP 196 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLAD 118 G + S++D IL GAD + I A+ +P + ++ D Sbjct: 197 VIANGDVFSVKDYKDILDETGADGVMIARGAMGNPFIFRQIKD 239 >UniRef50_Q2RZL4 NifR3 family enzyme n=2 Tax=Rhodothermaceae RepID=Q2RZL4_SALRD Length = 443 Score = 83.8 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 79/240 (32%), Gaps = 20/240 (8%) Query: 27 EIIGDI--VPLAKRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCV-AG 81 E + D L KRY GAD + F + + + E I V G Sbjct: 83 EDVSDPPFRILCKRY---GADMMYTEFVSSAGLLREQEHEHQKLEIFDEERPIGIQVWGG 139 Query: 82 GIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD---AET 137 GI + +A ++ G D I IN + ++ + G ++ +D + A Sbjct: 140 GIDEVRNATPMVDAAGPDVIDINFGCP-----VRKIVQKDGGAGVLRNLDKMRNITAAVM 194 Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKV 196 + +D + ++ G + ++ ++ G E L+ + Sbjct: 195 EEATRPVTVKTRLGWDDDSIHIVDVARMLEDMGVAALTVHARTREQKYKGDARWEWLRTI 254 Query: 197 REVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +E +P I +G A E F + VDG + K Y+ T + Sbjct: 255 KEEGTRDMPFIGNGDALDPEAIEAMFEETGVDGVMLGRGALGNPWIFERAKTYMETGELP 314 Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 40/140 (28%), Gaps = 5/140 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVI--D 74 VK + IV +A+ + G L + T W+ + E D Sbjct: 203 VKTRLGWDD-DSIHIVDVARMLEDMGVAALTVHARTREQKYKGDARWEWLRTIKEEGTRD 261 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 +PF G E + G D + + AL +P + R + D Sbjct: 262 MPFIGNGDALDPEAIEAMFEETGVDGVMLGRGALGNPWIFERAKTYMETGELPPPPDWEE 321 Query: 134 DAETGKYHVNQYTGDESRTR 153 + H++ Sbjct: 322 RVQVVAEHLSLKCEWLGERT 341 >UniRef50_B6W908 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W908_9FIRM Length = 321 Score = 83.8 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 17/148 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S +A+P L+ + + K ++ G + + LD Sbjct: 111 GSQLMANPKLVEEICKTL------------RKSTDKKLNIKFRLGIDDKH----INYLDI 154 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + Q G ++L+ +D + +G + + ++K++E +P+IA+G ++E F+ Sbjct: 155 GKIAQDTGIDYVILHARTKDQMYSGNANWDHIRKLKENLQIPVIANGDIFSVEDFINVID 214 Query: 222 DADVDGALAASVFHKQIINIGELKAYLA 249 DG + A E+K Y+ Sbjct: 215 LTKADGVMLARGAMGNPFLFKEIKDYIK 242 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 2/88 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + + K + G D ++ + T + + ++ E + IP G I S+ED Sbjct: 152 LDIGKIAQDTGIDYVILHARTKDQMYSGNANWDHIRKLKENLQIPVIANGDIFSVEDFIN 211 Query: 92 ILS-FGADKISINSPALADPTLITRLAD 118 ++ AD + + A+ +P L + D Sbjct: 212 VIDLTKADGVMLARGAMGNPFLFKEIKD 239 >UniRef50_B6FRG7 Putative uncharacterized protein (Fragment) n=2 Tax=Clostridiales RepID=B6FRG7_9CLOT Length = 214 Score = 83.4 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 72/207 (34%), Gaps = 28/207 (13%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPL-----------AKRYAEEGADELVFYDI 52 + PC+D+ +G V+ + + + GD A Y ++G + Sbjct: 18 MQFRPCIDIHNG-AVRQIVGGSLKDEGDQAITNFTSEYDARFYANLYRKDGIRGGHIILL 76 Query: 53 T--ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 S K + + + GG+ + E+A + L GA + + S D Sbjct: 77 NPSTSEYFDATKKQALEALRAYPQG-MQIGGGV-TAENAKEYLDAGASHVIVTSYVFRDG 134 Query: 111 TL----ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET-LDWVQE 165 + + +L + G + IV+ + + Y T + + + + Sbjct: 135 EVKWENLQKLKETVGKERIVLDLSCRKKKD------FYYIVTNRWQTFTNVKVTISLLDQ 188 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 + E +++ ++ +G +G +L Sbjct: 189 LSDY-CDEFLIHGVDVEGKSSGVELPL 214 >UniRef50_C9KMX2 tRNA-dihydrouridine synthase n=3 Tax=Veillonellaceae RepID=C9KMX2_9FIRM Length = 322 Score = 83.0 bits (204), Expect = 8e-15, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 42/129 (32%), Gaps = 5/129 (3%) Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + A V G ++ + ++ + ++ G I ++ + Sbjct: 119 PERAFAILSAIRKAVKMPVTVKMRKGWDAAS----VNVVEMAKLAEEAGVDAIAVHGRTR 174 Query: 182 DGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + G D E + +V+ +P+IA+G T + + DG + Sbjct: 175 EQFYTGRADWEIIGEVKRAVKIPVIANGDVRTFDDLDKIRAVTGCDGVMIGRAAQGNPWI 234 Query: 241 IGELKAYLA 249 + YL Sbjct: 235 FRQFTHYLE 243 Score = 76.4 bits (187), Expect = 9e-13, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + + + ++V +AK E G D + + T D + V + IP Sbjct: 139 VKMRKGWDAASV-NVVEMAKLAEEAGVDAIAVHGRTREQFYTGRADWEIIGEVKRAVKIP 197 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 G +++ +D KI + G D + I A +P + + Sbjct: 198 VIANGDVRTFDDLDKIRAVTGCDGVMIGRAAQGNPWIFRQF 238 >UniRef50_A0Q6L0 TRNA-dihydrouridine synthase n=19 Tax=Francisella RepID=A0Q6L0_FRATN Length = 328 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 56/196 (28%), Gaps = 8/196 (4%) Query: 61 VDKSWVSRV-AEVIDIPF---CVAGGIKSLEDAAKIL--SFGADKISINSPALADPTLIT 114 + + + E + P I S A K + + D + IN P + Sbjct: 52 RNWETMEMLYMENSEKPLGIQIFGTDIDSFVGATKYIAENTECDFLDINMGCPM-PKVAK 110 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 +L + V I A H ++ + + G I Sbjct: 111 KLQAGAALLKDVNRIHEILTAVVKAVHKPVTVKMRIGWDDKNINAIEVAKACEDAGVSAI 170 Query: 175 VLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++ ++ + G + + ++ VR+ + +I +G VD + Sbjct: 171 AIHGRTREQMYTGKANWDIIRDVRKAVDIVVIGNGDVFCPHSAKAMIEHTGVDAVMVGRA 230 Query: 234 FHKQIINIGELKAYLA 249 ++ YL Sbjct: 231 SRGNPWIFRQIAKYLN 246 Score = 67.2 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 40/111 (36%), Gaps = 3/111 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + + I + + +AK + G + + T + + V + +DI Sbjct: 142 VKMRIGWDDKNI-NAIEVAKACEDAGVSAIAIHGRTREQMYTGKANWDIIRDVRKAVDIV 200 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIV 126 G + A ++ G D + + + +P + ++A ++ Sbjct: 201 VIGNGDVFCPHSAKAMIEHTGVDAVMVGRASRGNPWIFRQIAKYLNTGELI 251 >UniRef50_C1ZGV0 tRNA-dihydrouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGV0_PLALI Length = 322 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 56/166 (33%), Gaps = 9/166 (5%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD---AETGKYHVN 143 E A I G + +N I RL R ++ + A + Sbjct: 81 EAARVIEELGFSMVDLNFECP-----IRRLVGRGEGGALMGQPQRIAELVAAAKQAVSIP 135 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGYDLEQLKKVREVCHV 202 + + + ++ Q V++ G I+L+ + + G D + + +V+E + Sbjct: 136 VTVKLRTGPKAGEDTAVETAQRVEQAGGAAIILHARSVEQAYLGGPDWQHVTRVKEAVSI 195 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 P++ SGG T + + + DG + + L Sbjct: 196 PVLGSGGVRTPQDAISFLESSGADGVAIGRGCLGNPWIFQQARTLL 241 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 6/113 (5%) Query: 18 VKGVQF-RNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDI 75 VK + E V A+R + G ++ + + D V+RV E + I Sbjct: 138 VKLRTGPKAGEDTA--VETAQRVEQAGGAAIILHARSVEQAYLGGPDWQHVTRVKEAVSI 195 Query: 76 PFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLAD-RFGVQCIV 126 P +GG+++ +DA L GAD ++I L +P + + FG + I+ Sbjct: 196 PVLGSGGVRTPQDAISFLESSGADGVAIGRGCLGNPWIFQQARTLLFGSREII 248 >UniRef50_A9KHE5 TIM-barrel protein, nifR3 family n=2 Tax=Clostridiales RepID=A9KHE5_CLOPH Length = 324 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 38/109 (34%), Gaps = 1/109 (0%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 ++ + +++ G I ++ ++ +G D + +K V+E +P+ Sbjct: 140 VKIRKGFTKDNINAVEVAKVIEQSGGAAIAVHGRTREQYYSGEADWDIIKAVKEAVSIPV 199 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 I +G T E D + A + K YL T + Sbjct: 200 IGNGDVQTPEDVKRMMSYTGCDAVMIARGVRGNPWFFSQAKHYLNTGEI 248 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 3/122 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVA 70 ++ VK + + + V +AK + G + + T D + V Sbjct: 134 IKKPVTVKIRKG-FTKDNINAVEVAKVIEQSGGAAIAVHGRTREQYYSGEADWDIIKAVK 192 Query: 71 EVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 E + IP G +++ ED +++S G D + I +P ++ I+ Sbjct: 193 EAVSIPVIGNGDVQTPEDVKRMMSYTGCDAVMIARGVRGNPWFFSQAKHYLNTGEILAKP 252 Query: 130 DT 131 Sbjct: 253 SV 254 >UniRef50_C1FNC8 Dihydrouridine synthase n=35 Tax=cellular organisms RepID=C1FNC8_CLOBJ Length = 323 Score = 81.4 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 48/152 (31%), Gaps = 17/152 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S + DP L + + A+ +++ Sbjct: 112 GSALMKDPKLASEIIKA-----------MKKVAKK-----PITVKFRKGFDKNNINAVEF 155 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + +++ G I ++ ++ + G D + KV+ +P+I +G + E LE Sbjct: 156 AKIMEQSGVDAITIHGRTREQMYEGKADWAIISKVKNSVSIPVIGNGDVFSSEDALEMIN 215 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGV 253 D DG + ++ + + V Sbjct: 216 KTDCDGIMIGRGAQGNPWIFKQINEKIKGEHV 247 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 64/176 (36%), Gaps = 11/176 (6%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + + I + V AK + G D + + T D + +S+V + IP Sbjct: 139 VKFRKGFDKNNI-NAVEFAKIMEQSGVDAITIHGRTREQMYEGKADWAIISKVKNSVSIP 197 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + S EDA ++++ D I I A +P + ++ ++ + + Y Sbjct: 198 VIGNGDVFSSEDALEMINKTDCDGIMIGRGAQGNPWIFKQINEKIKGEHVY------YPT 251 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV-LNMM-NQDGVRNGYD 189 + + +S + + + +++ + + ++ + D Sbjct: 252 PQERIDICINHYKKSLEYFEEHKAVREMRKHVAVYVKGLKNCTDIKDKVNMEKDPD 307 >UniRef50_C8W6Y9 TIM-barrel protein, nifR3 family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W6Y9_ATOPD Length = 363 Score = 81.4 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 10/205 (4%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 G V ++ DI + G E + + ++++ N AL D + Sbjct: 73 GIHFGGEKTWELVEPLSTEPDIAVQLFG--SKPEQFKEAAAQISERLG-NKLALIDINMA 129 Query: 114 TRLADRFGVQCIVVGIDTWYDAET------GKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + +DT A + V R + ++ + ++ Sbjct: 130 CPVPKVVKKGEGSALLDTPELAANLVKACLSEVTVPVTVKIRRGRRQDEEVAPEFARAME 189 Query: 168 KRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 GA I ++ + G + E + +V + +P+I SG + E A ++ V Sbjct: 190 AAGASAIAVHGRFATQMYRGQAEWETVNRVCDAVSIPVIGSGDMLSAEDVAHALKETGVT 249 Query: 227 GALAASVFHKQIINIGELKAYLATQ 251 + A + +A L + Sbjct: 250 AVMIARGTYGNPWIFKNTQALLEGK 274 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 4/116 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD-KSWVSRVAEVIDIP 76 VK + R + A+ GA + + A+ R V+RV + + IP Sbjct: 168 VKIRRGRRQDEEVAP-EFARAMEAAGASAIAVHGRFATQMYRGQAEWETVNRVCDAVSIP 226 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRF-GVQCIVVGID 130 +G + S ED A L G + I +P + G V +D Sbjct: 227 VIGSGDMLSAEDVAHALKETGVTAVMIARGTYGNPWIFKNTQALLEGKTPFVPSVD 282 >UniRef50_C6JNK3 Dihydrouridine-tRNA ligase n=4 Tax=Fusobacterium RepID=C6JNK3_FUSVA Length = 320 Score = 81.1 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 66/207 (31%), Gaps = 32/207 (15%) Query: 63 KSWVSRVAEVIDIPFCVAGGIKSL-EDAAKILSFGADKISINS--------------PAL 107 + R+ E + IK + E A + S G I INS + Sbjct: 47 LKVILRLREGDSVQL-FGKDIKKMVESAKFVESLGVKHIDINSGCPMKKIVNNGYGAALM 105 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 P L+ + + D G ++ + Q Sbjct: 106 EQPELVKAMLSEV-RSALNDKTDLSIKIRVGYKESK--------------NPVEIAKIAQ 150 Query: 168 KRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + G I ++ ++ + G D +K+V+E +P+I +G T E E + VD Sbjct: 151 ETGCKHITIHGRTREQMYTGKADWSIIKEVKESVDIPVIGNGDIFTAEDAKERVDYSGVD 210 Query: 227 GALAASVFHKQIINIGELKAYLATQGV 253 G + A I +++ Y + Sbjct: 211 GIMLARGIFGNPWLIRDIREYFEYGKI 237 Score = 76.4 bits (187), Expect = 8e-13, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 2/103 (1%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGI 83 ++ + V +AK E G + + T D S + V E +DIP G I Sbjct: 135 GYKESKNPVEIAKIAQETGCKHITIHGRTREQMYTGKADWSIIKEVKESVDIPVIGNGDI 194 Query: 84 KSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 + EDA + + G D I + +P LI + + F I Sbjct: 195 FTAEDAKERVDYSGVDGIMLARGIFGNPWLIRDIREYFEYGKI 237 >UniRef50_B7GFK6 tRNA-dihydrouridine synthase n=211 Tax=Bacteria RepID=B7GFK6_ANOFW Length = 351 Score = 80.7 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 55/177 (31%), Gaps = 9/177 (5%) Query: 78 CVAGGIKSLEDAAKILSFGADK----ISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 G ++L AAK + + I++ P I + Sbjct: 90 IFGGEKETLVQAAKYVDQHTNADIIDINMGCPVPKITKCDAGAKWLLDPNKIYDMVAAVV 149 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 DA V G + ++ Q V++ G + ++ + + G D Sbjct: 150 DAVEKPVTVKMRIGWDENH----IYAVENAQAVERAGGQAVAVHGRTRVQMYEGKADWNV 205 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +K+V+E +P+I +G T + VDG + I YL Sbjct: 206 IKQVKEAVRIPVIGNGDVQTPQDAKRMLEQTGVDGVMIGRAALGNPWMIYRTVRYLE 262 Score = 67.6 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 3/135 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + I V A+ G + + T D + + +V E + IP Sbjct: 158 VKMRIGWDENHIY-AVENAQAVERAGGQAVAVHGRTRVQMYEGKADWNVIKQVKEAVRIP 216 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G +++ +DA ++L G D + I AL +P +I R ++ Sbjct: 217 VIGNGDVQTPQDAKRMLEQTGVDGVMIGRAALGNPWMIYRTVRYLETGELIPEPSVREKI 276 Query: 136 ETGKYHVNQYTGDES 150 E H+++ ++ Sbjct: 277 EVCILHLDRLIALKN 291 >UniRef50_Q6SFW7 NifR3/Smm1 family protein n=1 Tax=uncultured marine bacterium 578 RepID=Q6SFW7_9BACT Length = 322 Score = 80.7 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 60/188 (31%), Gaps = 5/188 (2%) Query: 70 AEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 +E I +AG E A + L FGAD I IN A +V Sbjct: 62 SEQSPISIQIAGSESQELAESAKQALEFGADIIDINMGCPAKKVCNKAAGSALMKNEKLV 121 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 A ++ + + + G + ++ + NG Sbjct: 122 EDIIK--AVVNAVNIPVTLKMRTGWNEENKNAPTIAKIAEDNGIKMLAIHGRTRAQKYNG 179 Query: 188 -YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + +KK++ + +P++A+G + + + D + +G++ Sbjct: 180 DAEYDTVKKIKGIVSIPVVANGDITSAQKAKKVLDYTGADAVMLGRATQGNPWLVGQINN 239 Query: 247 YLATQGVE 254 YL T Sbjct: 240 YLKTGKSP 247 Score = 66.4 bits (161), Expect = 9e-10, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 3/100 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K N E +AK + G L + T + + V ++ ++ IP Sbjct: 139 KMRTGWNEENKNAP-TIAKIAEDNGIKMLAIHGRTRAQKYNGDAEYDTVKKIKGIVSIPV 197 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 G I S + A K+L GAD + + +P L+ ++ Sbjct: 198 VANGDITSAQKAKKVLDYTGADAVMLGRATQGNPWLVGQI 237 >UniRef50_P37567 Probable tRNA-dihydrouridine synthase 1 n=19 Tax=Bacilli RepID=DUS1_BACSU Length = 333 Score = 80.3 bits (197), Expect = 5e-14, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 5/139 (3%) Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 I + DA V G + + Q V++ G + Sbjct: 114 AKWLLDPDKIYEMVSAVVDAVNKPVTVKMRMGWDEDH----IFAVKNAQAVERAGGKAVA 169 Query: 176 LNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 L+ + + G + + +K+V++ +P+I +G T + + VDG + Sbjct: 170 LHGRTRVQMYEGTANWDIIKEVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAA 229 Query: 235 HKQIINIGELKAYLATQGV 253 I YL T + Sbjct: 230 LGNPWMIYRTVQYLETGKL 248 Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 3/135 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + + I V A+ G + + T + + V + + IP Sbjct: 140 VKMRMGWDEDHIF-AVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDIIKEVKQSVSIP 198 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G +K+ +DA ++L G D + I AL +P +I R + Sbjct: 199 VIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKLKEEPQVREKM 258 Query: 136 ETGKYHVNQYTGDES 150 K H+++ + Sbjct: 259 AVCKLHLDRLIDLKG 273 >UniRef50_Q55724 Probable tRNA-dihydrouridine synthase 1 n=34 Tax=Cyanobacteria RepID=DUS1_SYNY3 Length = 355 Score = 80.3 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 62/168 (36%), Gaps = 9/168 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI---DTWYDAETGKYHV 142 E A K ++ GA + IN + ++ + G ++ + V Sbjct: 112 AEAAQKAVAQGAQSVDINMGCPVN-----KITKKGGGSSLLRQPAVAEAIVKTVVAAVDV 166 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + +++ Q +Q GA + L+ + NG + + KV++ Sbjct: 167 PVTVKTRLGWDDGEINIVEFAQRLQDAGAQMLTLHGRTRAQGYNGRARWQWIAKVKQALT 226 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +P+IA+G ++E + + DG + + +GE++ + Sbjct: 227 IPVIANGDIFSVEAAIACLEETGADGVMCSRGSLGYPFLVGEIEHFFK 274 Score = 74.5 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 60/167 (35%), Gaps = 11/167 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVD 62 K ++ +DV VK + I +IV A+R + GA L + T + Sbjct: 158 KTVVAAVDVP--VTVKTRLGWDDGEI-NIVEFAQRLQDAGAQMLTLHGRTRAQGYNGRAR 214 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFG 121 W+++V + + IP G I S+E A L GAD + + +L P L+ + F Sbjct: 215 WQWIAKVKQALTIPVIANGDIFSVEAAIACLEETGADGVMCSRGSLGYPFLVGEIEHFFK 274 Query: 122 VQC------IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 + + + + G + W D+ Sbjct: 275 TGEKRKAPTVAEKLTCAQEHLQMLWEYKGQRGLFQARKHLAWYCKDF 321 >UniRef50_D2RLJ7 TIM-barrel protein, nifR3 family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLJ7_ACIFE Length = 331 Score = 79.9 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 50/134 (37%), Gaps = 5/134 (3%) Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + DA V G + R ++ + +K G + ++ + Sbjct: 125 PERAYACLAALVDAVDRPVTVKFRAGWDEDHR----NAVEIARLAEKAGVAAVAVHGRTR 180 Query: 182 DGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G D + +++V+E +P++ +G T + L+ DG + A Sbjct: 181 GQFYSGKADWDIIRQVKEAVSIPVLGNGDVFTAQDALDLLAATHCDGVMIARGAQGNPWI 240 Query: 241 IGELKAYLATQGVE 254 E++A LA + + Sbjct: 241 FREVQAVLAGKTIP 254 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 3/110 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + + V +A+ + G + + T D + +V E + IP Sbjct: 145 VKFRAGWDE-DHRNAVEIARLAEKAGVAAVAVHGRTRGQFYSGKADWDIIRQVKEAVSIP 203 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCI 125 G + + +DA +L+ D + I A +P + + + I Sbjct: 204 VLGNGDVFTAQDALDLLAATHCDGVMIARGAQGNPWIFREVQAVLAGKTI 253 >UniRef50_D2RIC4 Geranylgeranylglyceryl phosphate synthase n=2 Tax=Euryarchaeota RepID=D2RIC4_ARCPR Length = 262 Score = 79.9 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 79/234 (33%), Gaps = 23/234 (9%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV-AGGI 83 +++ + D V A+R E GAD ++ + G +D V + + +DIP + G I Sbjct: 28 DYKSLDDAVETARRVYEGGAD-VILVGGSIGVQGEPLDY-VVREIKKSVDIPVVLFPGNI 85 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRL-------ADRFGVQCIVVGIDTWYDAE 136 ++ A L F ++ +P ITR G++ + VG Sbjct: 86 GTITRYADALYF------MSLLNSRNPYWITRAQMQAAHLIKTLGLEPLPVG--YIVVEP 137 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV 196 G R R + G ++ + LE +++V Sbjct: 138 GGTVGYVGEADLIPRNRPKLASAYALAGQF--MGFR-FIVTDAGSNPKEGHIPLEMVREV 194 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +P + +GG E + D + F + + +K+++ Sbjct: 195 ANSISIPYVVAGGVRRPEEAEKIIEC-GADAVQVGTAF-EIDNAVERVKSFVKA 246 >UniRef50_B3QWF2 TIM-barrel protein, nifR3 family n=26 Tax=Bacteroidetes/Chlorobi group RepID=B3QWF2_CHLT3 Length = 402 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 31/179 (17%) Query: 86 LEDAAKILSFGADKISIN--------------SPALADPTLITRLADRFGVQCIVVGIDT 131 +E A + G D I IN S L P L+ ++ D Sbjct: 124 VEAAQMAEAAGPDFIDINYGCPAKKVAGKGAGSGLLCQPDLMEKIT------------DA 171 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDL 190 A G + R+ LD V+ ++ G + ++ + + G D Sbjct: 172 VVKAVRLPVTAKTRIGWDERS----ISILDTVRRLEGCGIQALSIHGRTRAQMYKGRADW 227 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + + +EV +P+I +G T E F + VDG + E K + Sbjct: 228 SWIARAKEVATIPIIGNGDIWTAEDAKRMFDETGVDGVMIGRGAIGNPFLFREAKHLIQ 286 Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 15/120 (12%) Query: 11 DVRDGQ---VVKGVQ---------FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 D+ + VVK V+ + I I+ +R G L + T + Sbjct: 163 DLMEKITDAVVKAVRLPVTAKTRIGWDERSIS-ILDTVRRLEGCGIQALSIHGRTRAQMY 221 Query: 59 RV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 + D SW++R EV IP G I + EDA ++ G D + I A+ +P L Sbjct: 222 KGRADWSWIARAKEVATIPIIGNGDIWTAEDAKRMFDETGVDGVMIGRGAIGNPFLFREA 281 >UniRef50_C6PST5 Dihydrouridine synthase DuS n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PST5_9CLOT Length = 236 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 42/100 (42%), Gaps = 1/100 (1%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + + ++ + + GA I ++ ++ + +G +Q+++ + V +P+ Sbjct: 59 VKFRVGIKEDEMIAAEFAKMCEASGADMITIHGRTRNMMYHGTPYFDQIEQAKSVVRIPV 118 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 IA+GG + E + + DG + A + EL Sbjct: 119 IANGGIFSKEDADKMMKLTGADGVMIARYAIENPFIFSEL 158 Score = 67.6 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 5/111 (4%) Query: 13 RDGQVVKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASSDGRVVD-KSWVSRV 69 + G+V+ V+FR +++ AK GAD + + T + + + Sbjct: 52 KSGKVI-TVKFRVGIKEDEMIAAEFAKMCEASGADMITIHGRTRNMMYHGTPYFDQIEQA 110 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADR 119 V+ IP GGI S EDA K++ GAD + I A+ +P + + L + Sbjct: 111 KSVVRIPVIANGGIFSKEDADKMMKLTGADGVMIARYAIENPFIFSELTHK 161 >UniRef50_A2DHB4 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DHB4_TRIVA Length = 312 Score = 79.1 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 15/146 (10%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 G I++ D LI I + + + + Sbjct: 111 RSGCGFFLIDTQKHRDSALI--------------LIQNLIKSINKPVSIKIRLISDDNSV 156 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 + T+ + Q++++ G I ++ Q + G D + +K V + VP+IA+GG + Sbjct: 157 PSLERTVKFAQDLERVGVSLITVHARTQQADKKGDVDYDAIKAVVQAVSVPVIANGGISS 216 Query: 213 MEHFLEAFRDADVDGALAASVFHKQI 238 +E E + +A F K Sbjct: 217 LEQAQEIIQRTGAYAVMAGQCFFKNP 242 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 22/153 (14%) Query: 33 VPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V A+ G + + T + VD + V + + +P GGI SLE A + Sbjct: 163 VKFAQDLERVGVSLITVHARTQQADKKGDVDYDAIKAVVQAVSVPVIANGGISSLEQAQE 222 Query: 92 IL-SFGADKISINSPALADPTLI------TRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 I+ GA + +PT + ++ + + + + D + + HV Sbjct: 223 IIQRTGAYAVMAGQCFFKNPTCLTTNKNPKEISLEY----LNLAKENNEDLQRSRKHVYA 278 Query: 145 YTGDESRTRV----------TQWETLDWVQEVQ 167 + GD R T + ++WV+ ++ Sbjct: 279 FLGDVLRQHPEYGPVVMQQRTYVDLIEWVKSIE 311 >UniRef50_A7I924 Histidine biosynthesis n=3 Tax=Methanomicrobiales RepID=A7I924_METB6 Length = 238 Score = 79.1 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 79/254 (31%), Gaps = 42/254 (16%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA--------DELVFYDITA 54 ++ LD++ VV G + + E L D+ Sbjct: 13 TMELVLALDLQHNMVVHGKSGQRATY--KPLDWGLSPTAEPIGFVKATAPKFLYIADLDR 70 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 +G+ + + A++++ V G+++ D +L+ K I + + Sbjct: 71 -IEGKGNHDALIRGCADLVE-RCYVDRGVQTPSD---LLTGPHLKNIIGTETS-----LA 120 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 +L+ G + ID + T ++E + Sbjct: 121 KLSQYHGG---YLSIDV----------------MNGKVIPTGDSPESVLREARGWDFEGC 161 Query: 175 VLNMMNQDGVRNGYD--LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +L + G NG L R L+ GG + + ++A DGA+ A+ Sbjct: 162 ILLNLGFVGTENGIGEGTGPLAAWRSAYPGRLLYGGGVASPADL-DTIKNAGFDGAIIAT 220 Query: 233 VFHKQIINIGELKA 246 HK + ++ Sbjct: 221 ALHKGAVPAEAIRR 234 >UniRef50_A6NW05 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NW05_9BACE Length = 307 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 44/129 (34%), Gaps = 5/129 (3%) Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 V A V G + + +++ + ++ G + ++ + + Sbjct: 109 VAEAVVRGAGERPVTVKFRLGWDKGS----INCVEFAKAMEAAGVSAVAVHGRTRTQMYA 164 Query: 187 G-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 G + + +++V++ +P+IA+G R D A+ + + Sbjct: 165 GTANWDYIREVKQAVSIPVIANGDVFDGPAAAHILRYTGADMAMIGRGCFGNPWVFQQAR 224 Query: 246 AYLATQGVE 254 A L + + Sbjct: 225 AALEGEEIP 233 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 42/120 (35%), Gaps = 11/120 (9%) Query: 17 VVKG-------VQFRNHEIIGDI--VPLAKRYAEEGADELVFYDITASSDGRV-VDKSWV 66 VV+G V+FR G I V AK G + + T + + ++ Sbjct: 113 VVRGAGERPVTVKFRLGWDKGSINCVEFAKAMEAAGVSAVAVHGRTRTQMYAGTANWDYI 172 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 V + + IP G + AA IL GAD I +P + + + I Sbjct: 173 REVKQAVSIPVIANGDVFDGPAAAHILRYTGADMAMIGRGCFGNPWVFQQARAALEGEEI 232 >UniRef50_D0NNQ3 tRNA-dihydrouridine synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NNQ3_PHYIN Length = 377 Score = 78.4 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 64/158 (40%), Gaps = 7/158 (4%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 K++ AAK++ D + +N L P I R +G + +T +N Sbjct: 91 KTVLAAAKMVEGHCDAVDLN---LGCPQGIAR-KGHYGSFLMHDKETVKATVKTLSAGLN 146 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY---DLEQLKKVREVC 200 + R ETL++ +Q+ G + ++ ++ + + + +++++E Sbjct: 147 IPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTKEMNKTAVREVNWDIIRRIKERL 206 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +P+IA+GG T E DG +++ + Sbjct: 207 TIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENP 244 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 4/101 (3%) Query: 33 VPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + A E G D L + T + R V+ + R+ E + IP GGI++ ED Sbjct: 163 LEFADMLQEAGCDLLTVHGRTKEMNKTAVREVNWDIIRRIKERLTIPVIANGGIETHEDI 222 Query: 90 AKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGI 129 A+ L G D + + L +P L + G + + Sbjct: 223 ARCLEATGCDGVMSSEGLLENPALFADTNNTPGEDTSFLEL 263 >UniRef50_A9A4W7 Putative TIM-barrel protein, nifR3 family n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A4W7_NITMS Length = 320 Score = 78.4 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 7/207 (3%) Query: 49 FYDITASSDGRVVDKSWVSRVAE----VIDIPFCV-AGGIKSLEDAAKILSFGADKISIN 103 + I A + + + E I + + +LE AA I+ D I N Sbjct: 41 IHSIIAKEEQLKENMKTIQEFIEFSEQERPISVQLFGSDLYALEKAATIVEPYFDIIDYN 100 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 P + ++A +Q + + + T +++ D Sbjct: 101 -MGCPAPHITQQMAGGALLQEVNLTQQIFETLVNAVKKPVTLKIRSGVTDASKFLFRDIA 159 Query: 164 QEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 + + +G I + +G D + +K+++E+ ++P++ +G T E + Sbjct: 160 EIAEDQGIQMITFHPRTVSQGYSGSADWKLIKELKEISNIPVVGNGDITTPEDAKMMLDE 219 Query: 223 ADVDGALAASVFHKQIINIGELKAYLA 249 D + ++ YL Sbjct: 220 TGCDYVMIGRGAMGNPFLFEQINDYLK 246 >UniRef50_C1ZDL9 Putative TIM-barrel protein, nifR3 family n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZDL9_PLALI Length = 385 Score = 78.0 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 61/177 (34%), Gaps = 10/177 (5%) Query: 77 FCVAGGIKSL-EDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDT--W 132 + GG S+ DAA++L G D I IN ++ + G + Sbjct: 108 VQIFGGEASIMRDAAQLLEARGVDSIDIN----MGCPVLKVVKTGAGASLMCHADAATEL 163 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLE 191 A HV +Q + +E ++ G + ++ + +G + + Sbjct: 164 VKAVVEAVHVPVTVKMRLGWDASQLTAPRFAREFEQVGVAAVAIHGRTRAQGFSGTVNRD 223 Query: 192 QLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +++V E +P+IA+G +++ + + + +L + Sbjct: 224 GIRQVVEAVDSIPVIANGDIRSVDDAIAMYDETGCQAISIGRGALANPWIFRQLTEW 280 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 4/105 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVID-I 75 VK + + A+ + + G + + T + V++ + +V E +D I Sbjct: 177 VKMRLGWDASQLTAP-RFAREFEQVGVAAVAIHGRTRAQGFSGTVNRDGIRQVVEAVDSI 235 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADR 119 P G I+S++DA + G ISI ALA+P + +L + Sbjct: 236 PVIANGDIRSVDDAIAMYDETGCQAISIGRGALANPWIFRQLTEW 280 >UniRef50_C7H613 tRNA-dihydrouridine synthase n=3 Tax=Ruminococcaceae RepID=C7H613_9FIRM Length = 340 Score = 78.0 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 19/153 (12%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S + DP R+ + + V G ++ ++ Sbjct: 150 GSKLMLDPDRCGRIVEEV------------VKNTSRPVTVKMRKGWDAEH----VTAVEC 193 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + ++ GA I ++ ++ + G D + V++ HVP++ +G T E + Sbjct: 194 AKACEQAGAVLIAVHARTREQMYTPGIDPSIIAAVKDAVHVPVLGNGDIRTAEDAVRMVE 253 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + DG + A + A L +G+ Sbjct: 254 ETGCDGVMIARAALGDPWLFERVNAAL--EGLP 284 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIP 76 VK + + E + V AK + GA + + T +D S ++ V + + +P Sbjct: 177 VKMRKGWDAEHVT-AVECAKACEQAGAVLIAVHARTREQMYTPGIDPSIIAAVKDAVHVP 235 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 G I++ EDA +++ G D + I AL DP L R+ Sbjct: 236 VLGNGDIRTAEDAVRMVEETGCDGVMIARAALGDPWLFERV 276 >UniRef50_C8W3U6 TIM-barrel protein, nifR3 family n=8 Tax=Clostridia RepID=C8W3U6_DESAS Length = 322 Score = 77.6 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 32/110 (29%), Gaps = 1/110 (0%) Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE 198 V + ++ ++ GA + ++ + +G D + +K V++ Sbjct: 133 VRVPVTVKIRKGWDESFPNAVEMALLAEEAGAKAVTVHGRTRSQFYSGKADWDIIKSVKK 192 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 +P+I +G + D + +L Sbjct: 193 AVTIPVIGNGDIREPRDAVRMLMHTGCDAVMIGRASLGNPWIFSSTVHFL 242 Score = 77.2 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 3/119 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + + + V +A E GA + + T S D + V + + IP Sbjct: 139 VKIRKGWDESFP-NAVEMALLAEEAGAKAVTVHGRTRSQFYSGKADWDIIKSVKKAVTIP 197 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 G I+ DA ++L G D + I +L +P + + + Sbjct: 198 VIGNGDIREPRDAVRMLMHTGCDAVMIGRASLGNPWIFSSTVHFLDCGENLPAPSPRQR 256 >UniRef50_Q0W6C2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=2 Tax=Euryarchaeota RepID=Q0W6C2_UNCMA Length = 229 Score = 77.6 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 62/195 (31%), Gaps = 24/195 (12%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 + + + E D+ G S +S ++ + GI Sbjct: 34 RLVTTSAPLEVIRTMRP---KETYIADLDR-ITGAGDHLSTISDISAISSTMVDA--GIS 87 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 EDAA++ +D I + + + L + + ++V +D Sbjct: 88 REEDAARLRKV-SDSIIMGTETAS-----LSLIEALQARDVLVSVDMR------------ 129 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 + + + V+ + + G I+L + + G G DL L + P+ Sbjct: 130 HGQMMAADPALPESPMMVVRRLNELDLGGIILLDIARVGSGEGIDLGLLSDAASISRHPV 189 Query: 205 IASGGAGTMEHFLEA 219 I GG ++ + Sbjct: 190 IVGGGVRDVQDLEQM 204 >UniRef50_Q5CSA9 Dus1p, tRNA dihydrouridine synthase (Fragment) n=3 Tax=Cryptosporidium RepID=Q5CSA9_CRYPV Length = 409 Score = 77.6 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 18/152 (11%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 A + + + L++P L+ R+ + Sbjct: 113 AKRGNYGAFLLSNPDLMERIISTLSESDL---------------KCPVSCKIRILDHHDL 157 Query: 157 WETLDWVQEVQKRGAGEIVLNM--MNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTM 213 T++ ++ ++ GA I ++ M GV G + E LK ++ C +P IA+GG Sbjct: 158 QPTINLIKRLESAGACMIAVHGRTMTSRGVLTGPANWEALKILKSRCSIPFIANGGISNY 217 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELK 245 E + D ++A + K Sbjct: 218 EDIQKCLNYTGADAVMSAEGILENPWLFQGFK 249 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 4/86 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + L KR GA + + T +S G + + + IPF GGI + ED Sbjct: 161 INLIKRLESAGACMIAVHGRTMTSRGVLTGPANWEALKILKSRCSIPFIANGGISNYEDI 220 Query: 90 AKILS-FGADKISINSPALADPTLIT 114 K L+ GAD + L +P L Sbjct: 221 QKCLNYTGADAVMSAEGILENPWLFQ 246 >UniRef50_Q1RH84 Probable tRNA-dihydrouridine synthase n=59 Tax=Alphaproteobacteria RepID=DUS_RICBR Length = 326 Score = 77.6 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 1/117 (0%) Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 +A + + ++ G + ++ + +G D E Sbjct: 128 EAAVKAVKIPVTVKMRMGWDDQTKNAPTLAKIAERSGIQMVTVHGRTRCQFYSGNADWEF 187 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +K V+E +P+IA+G EA + DG + + + I ++ YL Sbjct: 188 IKNVKEAVKIPVIANGDITNFAKAKEALEKSSADGVMVGRGAYGKPWLISQIDHYLK 244 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + + LAK G + + T D ++ V E + IP Sbjct: 140 VKMRMGWDDQTKNAP-TLAKIAERSGIQMVTVHGRTRCQFYSGNADWEFIKNVKEAVKIP 198 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 G I + A + L AD + + A P LI+++ Sbjct: 199 VIANGDITNFAKAKEALEKSSADGVMVGRGAYGKPWLISQI 239 >UniRef50_D1BLD4 TIM-barrel protein, nifR3 family n=12 Tax=cellular organisms RepID=D1BLD4_VEIPT Length = 328 Score = 77.2 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 5/112 (4%) Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVR 197 V G +S + +D+ + ++ G I ++ ++ + +G D +K V+ Sbjct: 140 PVTVKMRIGWDSDS----INVVDFAKRIESTGVAAIAVHGRTKEQMYSGHADWSYIKAVK 195 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 E VP++ +G E + + D + G + YLA Sbjct: 196 EAVSVPVLGNGDIVEPEDAKQMLDETGCDAVMVGRGAQGNPWIFGRIHHYLA 247 Score = 66.4 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIP 76 VK + ++V AKR G + + T D S++ V E + +P Sbjct: 143 VKMRIGWDS-DSINVVDFAKRIESTGVAAIAVHGRTKEQMYSGHADWSYIKAVKEAVSVP 201 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 G I EDA ++L G D + + A +P + R+ Sbjct: 202 VLGNGDIVEPEDAKQMLDETGCDAVMVGRGAQGNPWIFGRI 242 >UniRef50_A8F3E7 N-acylglucosamine-6-phosphate 2-epimerase n=1 Tax=Thermotoga lettingae TMO RepID=A8F3E7_THELT Length = 222 Score = 77.2 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 76/239 (31%), Gaps = 53/239 (22%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFC 78 + + + IV +A+ GA + R + V V + + IP Sbjct: 13 QLEPGDPVQDVSFIVNMARSADYAGAVAV-----------RTNNADHVRAVKDSVSIPVI 61 Query: 79 VAGGIK----------SLEDAAKILSFGADKISINSPALADP----TLITRLADRFGVQC 124 G +K + E A ++ GAD ++I+ P TL + F Sbjct: 62 --GLVKDRNYQAFITPTFEHARDVIKAGADFVAIDCTRSERPVQLKTLFEEIRSSFPDVG 119 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 I+ I DA + V ++ + Sbjct: 120 IIADIADEADA-------------------------ELVSALRPDFIATTLCGYTPYTLG 154 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + ++E ++ + +P+IA GG T+E AF++ + + + I I + Sbjct: 155 CSLPNIELVRGLSRKMSIPIIAEGGYTTLEEVQNAFQN-GAYAVVIGTAITRPWITIKK 212 Score = 43.7 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%) Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V ++ + IP GG +LE+ GA + I + I + D F Sbjct: 158 PNIELVRGLSRKMSIPIIAEGGYTTLEEVQNAFQNGAYAVVIGTAITRPWITIKKFVDLF 217 >UniRef50_A2EN54 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2EN54_TRIVA Length = 321 Score = 76.8 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 2/85 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V AK E GA + + +A+ D +K V V + + IP V GGI SL+DA Sbjct: 161 VDFAKHLEEAGASLITIHGRSAAQDKHGPLNKELVKAVVQAVSIPVIVNGGINSLDDARN 220 Query: 92 IL-SFGADKISINSPALADPTLITR 115 ++ GA L DPTL + Sbjct: 221 MIRETGAIAAMSAQSLLMDPTLFDK 245 Score = 69.9 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 62/171 (36%), Gaps = 17/171 (9%) Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 ++G I D +L+ P + ++A R +V + Sbjct: 72 IQISGSI----DV-DLLTTAKSMSEFGVPIDINLGCCQKVAKRGEYGYFMVDSEQKRQNV 126 Query: 137 TG-------KYHVNQYTGDESRTRVTQWE----TLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + V Y + T + T+D+ + +++ GA I ++ + + Sbjct: 127 VNLIKSIPSEITVPLYVKIRALTDESGIPSIPITVDFAKHLEEAGASLITIHGRSAAQDK 186 Query: 186 NGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +G + E +K V + +P+I +GG +++ R+ A++A Sbjct: 187 HGPLNKELVKAVVQAVSIPVIVNGGINSLDDARNMIRETGAIAAMSAQSLL 237 >UniRef50_B8FGI4 TIM-barrel protein, nifR3 family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGI4_DESAA Length = 332 Score = 76.8 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 9/173 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADR-FGVQCIVVGIDTWYDAETGKYHV-- 142 + A + GAD + IN + ++ G + + + + Sbjct: 81 ADSARIVAEHGADIVDINFGCS-----VKKVLKGGAGSALMADLPRAEKILKEVRKAISL 135 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH 201 S + E + + Q G + L+ +G+ D Q+K++++ Sbjct: 136 PFTIKMRSGWDASGDEAMALGRIAQDAGVDAVALHPRTAKQGFSGHSDWSQIKRLKQELT 195 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +P+I +G EH LE DG + + L + +E Sbjct: 196 IPVIGNGDVTKPEHVLEMMEQTGCDGVMIGRAVLYAPWIFRQALCLLENRPME 248 Score = 58.3 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 4/140 (2%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 L + + G D + + TA D S + R+ + + IP G + E ++ Sbjct: 154 ALGRIAQDAGVDAVALHPRTAKQGFSGHSDWSQIKRLKQELTIPVIGNGDVTKPEHVLEM 213 Query: 93 LS-FGADKISINSPALADPTLITRLADRFGVQCI--VVGIDTWYDAETGKYHVNQYTGDE 149 + G D + I L P + + + + + D Y G+E Sbjct: 214 MEQTGCDGVMIGRAVLYAPWIFRQALCLLENRPMEEIDLDDRKKVLFDYLDDTMDYLGEE 273 Query: 150 SRTRVTQWETLDWVQEVQKR 169 RV + +V+ + Sbjct: 274 HGCRVMRSRLAWFVKGLPNA 293 >UniRef50_Q2RTR9 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTR9_RHORT Length = 362 Score = 76.4 bits (187), Expect = 8e-13, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 9/152 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT---WYDAETGKYHV 142 E A ++ GA+ I IN + ++ G ++ + +A G + Sbjct: 86 AEAARRVEGAGAELIDINMGCP-----VRKVVGGLGGSALMRDLPLAARILEAVVGAVTL 140 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 ++ + + G + ++ + + +G D + V+ Sbjct: 141 PVSLKMRLGWDDASRNAVELARLAESAGISRLTVHGRTRAQMYDGRADWPAIGLVKRAVS 200 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +P+IA+G + E DG + Sbjct: 201 LPVIANGDVTNLSEAREILAVTGADGVMIGRA 232 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLE 87 + V LA+ G L + T + D + V + +P G + +L Sbjct: 154 SRNAVELARLAESAGISRLTVHGRTRAQMYDGRADWPAIGLVKRAVSLPVIANGDVTNLS 213 Query: 88 DAAKILS-FGADKISINSPALADPTL 112 +A +IL+ GAD + I AL P L Sbjct: 214 EAREILAVTGADGVMIGRAALGAPWL 239 >UniRef50_A2FU21 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2FU21_TRIVA Length = 322 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 67/185 (36%), Gaps = 18/185 (9%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDI-VPLAKRYAEEGADELVFYDITA-SSDGR 59 + K I+ ++V + + + + DI AK + G + + S+ Sbjct: 132 MVKNIVASINVPLSIKFRLIDGEDGKPDVDITCKFAKELEDAGVSLISVHGRAKNSNKAG 191 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLIT---- 114 VD + ++AE + IP GG+++ E+A ++ A + + L +P + Sbjct: 192 PVDAEAIRKIAESVSIPVMANGGVRTKEEAIEMFKESHAAGVMVGQGLLMNPKAFSDTPE 251 Query: 115 -----------RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 +L + + ++ VN+ GD +T + E ++ Sbjct: 252 HDPVAISREYLQLWKEYPDPNFFIARRHIFNFFDEIVRVNKPVGDYLKTTHSIEELESFL 311 Query: 164 QEVQK 168 + + Sbjct: 312 TDYEN 316 Score = 71.4 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 67/197 (34%), Gaps = 23/197 (11%) Query: 55 SSDGRVVDKSWVSRVA--EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + ++ + + + G + A+ +G ++ + + Sbjct: 75 IQMSGNDESELIACAKDLQQFAVGIDINCG--CTQHIARRGQYGYFMVNNENKRKNVIEM 132 Query: 113 ITRLADRFGVQCIVVGIDTW-YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + + + I D E GK V+ + +E++ G Sbjct: 133 VKNIVASI---NVPLSIKFRLIDGEDGKPDVDITCK--------------FAKELEDAGV 175 Query: 172 GEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 I ++ ++ + G D E ++K+ E +P++A+GG T E +E F+++ G + Sbjct: 176 SLISVHGRAKNSNKAGPVDAEAIRKIAESVSIPVMANGGVRTKEEAIEMFKESHAAGVMV 235 Query: 231 ASVFHKQIINIGELKAY 247 + + Sbjct: 236 GQGLLMNPKAFSDTPEH 252 >UniRef50_A9GW95 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GW95_SORC5 Length = 328 Score = 76.4 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 34/108 (31%), Gaps = 1/108 (0%) Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHV 202 + +D + ++ G + ++ +G D + REV + Sbjct: 142 TVKTRIGWGPESHMPIVDLARRLEDAGVAALTIHCRTAQMGHSGAADWGWAARAREVVSI 201 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 P++ +G T + A R+ G + E +A L Sbjct: 202 PVVVNGDIKTADDAARALRETGCAGVMVGRAAIDHPWIFREARALLDD 249 Score = 68.3 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 2/110 (1%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIP 76 VK E IV LA+R + G L + TA D W +R EV+ IP Sbjct: 143 VKTRIGWGPESHMPIVDLARRLEDAGVAALTIHCRTAQMGHSGAADWGWAARAREVVSIP 202 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCI 125 V G IK+ +DAA+ L G + + A+ P + Sbjct: 203 VVVNGDIKTADDAARALRETGCAGVMVGRAAIDHPWIFREARALLDDGVH 252 >UniRef50_Q31II6 Dihydrouridine synthase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31II6_THICR Length = 320 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 52/163 (31%), Gaps = 22/163 (13%) Query: 93 LSFGADK-----ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 L+ G ++ S + P + + +A V TG Sbjct: 96 LNMGCPAKKVCDVAAGSALMGQPERVADIFKSL------------TEAIDLPVTVKIRTG 143 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 + ++ + Q+ G I ++ + NG + + +K V++ +P+IA Sbjct: 144 TDVD----NINAVEIAKLAQELGLKAITIHGRTRADKFNGQAEYDTIKAVKQAVDIPVIA 199 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +G + + + DG + E+ +L Sbjct: 200 NGDICSPKEAQFVLKYTGSDGIMIGRAAQGYPWIFREIAHFLK 242 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 5/125 (4%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD-KSWVS 67 +D+ VK + V +AK E G + + T + + Sbjct: 131 AIDLP--VTVKIRTG-TDVDNINAVEIAKLAQELGLKAITIHGRTRADKFNGQAEYDTIK 187 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIV 126 V + +DIP G I S ++A +L G+D I I A P + +A + Sbjct: 188 AVKQAVDIPVIANGDICSPKEAQFVLKYTGSDGIMIGRAAQGYPWIFREIAHFLKTGDCL 247 Query: 127 VGIDT 131 Sbjct: 248 PSPSF 252 >UniRef50_C9XSF8 tRNA-dihydrouridine synthase n=24 Tax=Clostridia RepID=C9XSF8_CLODC Length = 322 Score = 75.7 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 44/152 (28%), Gaps = 17/152 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S + +P L + + K V ++ Sbjct: 111 GSALMKNPKLAEEVL--------------RAVVKNSKKPV--TLKIRKGWDDNSVNAVEI 154 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + + G + ++ ++ G D + + ++++ +P+I +G T+E + Sbjct: 155 AKIAEDCGISALAIHGRTREQFYTGKADWDIIAEIKKNLSIPVIGNGDVFTIEDSINMLD 214 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGV 253 D + + Y+ T + Sbjct: 215 KTGCDAIMIGRGAQGNPWIFKRINHYMNTGEI 246 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 3/100 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + + + + V +AK + G L + T D ++ + + + IP Sbjct: 139 KIRKGWDDNSV-NAVEIAKIAEDCGISALAIHGRTREQFYTGKADWDIIAEIKKNLSIPV 197 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 G + ++ED+ +L G D I I A +P + R+ Sbjct: 198 IGNGDVFTIEDSINMLDKTGCDAIMIGRGAQGNPWIFKRI 237 >UniRef50_B2A3T5 TIM-barrel protein, nifR3 family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3T5_NATTJ Length = 327 Score = 75.7 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 18/154 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S L P L + ++ V G + ++ + L+ Sbjct: 114 GSALLKKPHLAQEIVRE------------IVNSVNLPVTVKIRKGFDRKSS----DPLEL 157 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 +Q+ G + ++ + +G D E + K++ +P+I +G + E + A Sbjct: 158 ALRLQEVGIKALAVHGRTCEQQYSGKADWEVVAKLKNYLDIPVIGNGDIFSSEDAVSALE 217 Query: 222 DADVDGALAASVFHKQIINIGELKAYL-ATQGVE 254 DG + I + K L + +E Sbjct: 218 MTACDGIMLGRGLMGNPWLIEQTKGMLIKDEKIE 251 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 3/100 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIP 76 VK + D + LA R E G L + T D V+++ +DIP Sbjct: 141 VKIRKG-FDRKSSDPLELALRLQEVGIKALAVHGRTCEQQYSGKADWEVVAKLKNYLDIP 199 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 G I S EDA L D I + + +P LI + Sbjct: 200 VIGNGDIFSSEDAVSALEMTACDGIMLGRGLMGNPWLIEQ 239 >UniRef50_C4Z9L8 tRNA-dihydrouridine synthase n=26 Tax=Firmicutes RepID=C4Z9L8_EUBR3 Length = 323 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 50/146 (34%), Gaps = 17/146 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S + +P L ++ + A V G + ++ Sbjct: 119 GSALMKNPLLAGQIIES------------IVKAIDKPVTVKIRKGFDDEH----VNAVEL 162 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 ++ GA + ++ ++ +G D + +++V+E +P+I +G + E ++ Sbjct: 163 AHVAEESGASAVAVHGRTREQYYSGKADWDIIRQVKEAVSIPVIGNGDLLSAEDVIKMQE 222 Query: 222 DADVDGALAASVFHKQIINIGELKAY 247 DG + A ++ Y Sbjct: 223 QTGCDGFMIARGAQGNPWIFSQILHY 248 Score = 73.4 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 3/116 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIP 76 VK + + E + + V LA E GA + + T D + +V E + IP Sbjct: 146 VKIRKGFDDEHV-NAVELAHVAEESGASAVAVHGRTREQYYSGKADWDIIRQVKEAVSIP 204 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 G + S ED K+ G D I A +P + +++ F Sbjct: 205 VIGNGDLLSAEDVIKMQEQTGCDGFMIARGAQGNPWIFSQILHYFETGEHQEKPSF 260 >UniRef50_C1F4Z7 Putative tRNA-dihydrouridine synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4Z7_ACIC5 Length = 398 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 36/115 (31%), Gaps = 1/115 (0%) Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 +A G + + + ++ G + L+ ++ +G E Sbjct: 171 EAVRGAVKIPFTVKFRLGWNDQHIICVPLARLAEESGLNAVSLHARTREQGYSGQARWEH 230 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + +V++ +P+I +G T E DG + ++ Y Sbjct: 231 IAEVKDAVRIPVIGNGDVRTPEDACALVAKTGCDGVMIGRAAPANPWIFRQIAQY 285 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 2/88 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 VPLA+ E G + + + T ++ V + + IP G +++ EDA Sbjct: 197 VPLARLAEESGLNAVSLHARTREQGYSGQARWEHIAEVKDAVRIPVIGNGDVRTPEDACA 256 Query: 92 IL-SFGADKISINSPALADPTLITRLAD 118 ++ G D + I A A+P + ++A Sbjct: 257 LVAKTGCDGVMIGRAAPANPWIFRQIAQ 284 >UniRef50_Q1IVR5 Dihydrouridine synthase TIM-barrel protein nifR3 n=2 Tax=Acidobacteria RepID=Q1IVR5_ACIBL Length = 370 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 18/166 (10%), Positives = 53/166 (31%), Gaps = 9/166 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV---VGIDTWYDAETGKYHV 142 + A + G D + +N + R+ G ++ I +++ + Sbjct: 104 ADAAKVVQDLGFDLVDLNLGCPS-----KRVVKCNGGSGLLRDLPQIKVIFESVRKAVTI 158 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + + L+ + + G + ++ ++ +G + + +++V Sbjct: 159 PFTVKFRAGWNEKELVFLELAKLAENCGLNAVAMHARTREQGYSGQANWGWIADLKQVVK 218 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +P+I +G T E D + +++ Y Sbjct: 219 IPVIGNGDIRTPEDAAAMVAKTGCDAVMIGRSAASNPWIFRQIEQY 264 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK N + + + LAK G + + + T + W++ + +V+ IP Sbjct: 162 VKFRAGWNEKELV-FLELAKLAENCGLNAVAMHARTREQGYSGQANWGWIADLKQVVKIP 220 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 G I++ EDAA ++ G D + I A ++P + ++ Sbjct: 221 VIGNGDIRTPEDAAAMVAKTGCDAVMIGRSAASNPWIFRQI 261 >UniRef50_C9SVG4 5-proFAR isomerase n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SVG4_VERA1 Length = 208 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 80/268 (29%), Gaps = 82/268 (30%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGD----------IVPLAKRYAEEGADELVFY 50 M R PC+D+ GQV + V AK Y + + Sbjct: 1 MTRFR--PCIDLHAGQVKQIVGGTLDSTTTALQTNFVSPHPPAHFAKLYRD--------H 50 Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALAD 109 ++T + G S E +L G DK Sbjct: 51 NLTGAH-------------------------GRYSQERLDAVLHALGGDK---------- 75 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET-LDWVQEVQK 168 + +V+ + + + +T E + +++++ Sbjct: 76 -------------ERLVIDLSCRRRGDDRWF-----VAMNKWQTITDMEVNAESIRQLEP 117 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF--LEAFRDADVD 226 E +++ + +G++ G D ++++ E +P+ +GG +E ++ D VD Sbjct: 118 Y-CSEFLIHAADNEGLQKGVDKTLVQRLAEWASIPVTYAGGGRHLEDLDAVKRLSDGKVD 176 Query: 227 GALAASVFH---KQIINIGELKAYLATQ 251 S + + E + Q Sbjct: 177 -LTIGSALDCFGGNGVKLEECVQWNRQQ 203 >UniRef50_Q5FMA1 Transcriptional regulator n=14 Tax=Firmicutes RepID=Q5FMA1_LACAC Length = 342 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 55/177 (31%), Gaps = 9/177 (5%) Query: 78 CVAGGIKSLEDAAKILSFGADKISIN-SPALADPTLITR---LADRFGVQCIVVGIDTWY 133 G ++L AA+ + D I+ + P + I + Sbjct: 76 IFGGTEETLLQAAQYIDQNTDADIIDINMGCPVPKVTKTDAGSKWLLDSNKIYQMVHAVV 135 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 V G + + ++ Q+ GA I ++ + + G D E Sbjct: 136 QNVQKPVSVKMRIGWDRKHVF----AVENALAAQEAGASMIAMHGRTRKQMYQGEADWEV 191 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 L V +V VP +A+G T E +A D + + ++ YL Sbjct: 192 LHDVAQVLDVPFVANGDIATPELAKKALDDIGCTAVMVGRAALGNPWILKDMVHYLE 248 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 3/135 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIP 76 VK + + + V A E GA + + T D + VA+V+D+P Sbjct: 144 VKMRIGWDRKHVF-AVENALAAQEAGASMIAMHGRTRKQMYQGEADWEVLHDVAQVLDVP 202 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 F G I + E A K L G + + AL +P ++ + + Sbjct: 203 FVANGDIATPELAKKALDDIGCTAVMVGRAALGNPWILKDMVHYLETGETLPPQTVREKV 262 Query: 136 ETGKYHVNQYTGDES 150 ET K+ + Sbjct: 263 ETAKHQLQGLIEIHG 277 >UniRef50_Q0BSS6 tRNA-dihydrouridine synthase n=15 Tax=Alphaproteobacteria RepID=Q0BSS6_GRABC Length = 370 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 54/168 (32%), Gaps = 6/168 (3%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI--VVGIDTWYDAETGKYHVN 143 E A + GA+ I IN + + A G + V +A V Sbjct: 114 AEAARIAIDKGAELIDINFGCPVKKVAVGQSA---GSALMRDEVTAAKILEATVKAVSVP 170 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 + + G I ++ + G D + +V++ + Sbjct: 171 VTLKMRMGWDHQSLNAPALAKIAEASGIRMITVHGRTRQQFYEGKADWAFVARVKQATSL 230 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 P+I +G T+E EA + DG + + + ++ AYL Sbjct: 231 PVIVNGDIQTVEQAAEARAISGADGVMVGRGCYGRPWFPRQVAAYLRD 278 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 3/113 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K +H+ + LAK G + + T D ++V+RV + +P Sbjct: 174 KMRMGWDHQSLNAP-ALAKIAEASGIRMITVHGRTRQQFYEGKADWAFVARVKQATSLPV 232 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 V G I+++E AA+ + GAD + + P ++A + Sbjct: 233 IVNGDIQTVEQAAEARAISGADGVMVGRGCYGRPWFPRQVAAYLRDGVHIPEP 285 >UniRef50_C0WDP2 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WDP2_9FIRM Length = 321 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 5/133 (3%) Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + DA + V G + + Q +K G + ++ + Sbjct: 117 PDKVYAILAALVDAVSIPVTVKFRAGWDEAHK----NAAVIAQMAEKAGVSAVCVHGRTR 172 Query: 182 DGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G D + ++ V+E +P++ +G E L + DG + A Sbjct: 173 AQFYQGKADWDIIRAVKESVGIPVLGNGDIFHAEDALRMKEETGCDGVMIARGAEGNPWI 232 Query: 241 IGELKAYLATQGV 253 ++KA L + + Sbjct: 233 FRDVKALLHGKAI 245 Score = 66.4 bits (161), Expect = 9e-10, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 3/110 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + + +A+ + G + + T + D + V E + IP Sbjct: 137 VKFRAGWDEA-HKNAAVIAQMAEKAGVSAVCVHGRTRAQFYQGKADWDIIRAVKESVGIP 195 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCI 125 G I EDA ++ G D + I A +P + + + I Sbjct: 196 VLGNGDIFHAEDALRMKEETGCDGVMIARGAEGNPWIFRDVKALLHGKAI 245 >UniRef50_C1A3V7 Putative tRNA-dihydrouridine synthase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3V7_GEMAT Length = 349 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVA---EVIDIPFCVAGGIKS-LEDAAKI 92 + GAD +V + ++ R +++ +S++ E I + G S + DAA + Sbjct: 31 RLCHAHGAD-VVVTEFLSAEGIRRENEATISKLRFAPEERPIGVQIFGSEPSAMADAAAL 89 Query: 93 LS--FGADKISINSPALADPTLITRLADRFGVQCIVVGID---TWYDAETGKYHVNQYTG 147 ++ F D + IN + ++ R G + +D A + + Sbjct: 90 VTDMFSPDFVDINFGCP-----VKKVVRRNGGSGCLKDLDLVEEIIRAVSKATPLPVTVK 144 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 S + + +Q GA L+ + + +G + +++ +V E +P++ Sbjct: 145 TRSGWNEEMRDPVGIALRMQDAGAKVFALHARTRTQMYSGSANWDEIARVAEALDIPVLG 204 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +G T DG + + Q + +A + V Sbjct: 205 NGDIKTALDAKRMLDHTKADGIMIGRGSYGQPWVFKQTRALIDGTPVP 252 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 61/180 (33%), Gaps = 20/180 (11%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIP 76 VK N E + D V +A R + GA + T + + ++RVAE +DIP Sbjct: 143 VKTRSGWNEE-MRDPVGIALRMQDAGAKVFALHARTRTQMYSGSANWDEIARVAEALDIP 201 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI---------- 125 G IK+ DA ++L AD I I + P + + + Sbjct: 202 VLGNGDIKTALDAKRMLDHTKADGIMIGRGSYGQPWVFKQTRALIDGTPVPETPGVQERF 261 Query: 126 VVGIDTWY-------DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + +D DA ++ G + E + +V+ E + Sbjct: 262 AIALDHARMVQGYEVDAIGAALEFRKHLGWYVKGLPNSAELRAKLHQVRDFAEVETIFTN 321 >UniRef50_C8WHM7 TIM-barrel protein, nifR3 family n=2 Tax=Coriobacteriaceae RepID=C8WHM7_EGGLE Length = 330 Score = 74.9 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 46/153 (30%), Gaps = 17/153 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S + DP L + A + V G ++ Sbjct: 115 GSALMKDPALAASIVRAV------------RAAVSRPVTVKFRRGWAEG----DETAPEF 158 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + ++ GA I ++ + + G + + +V+E VP++ +G + + Sbjct: 159 ARRMEDAGACAIAVHGRYAEQLYRGRAEWGAIARVKEAVSVPVVGNGDVRSGADAVAITE 218 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVE 254 D + A + KA LA + Sbjct: 219 RTGCDAVMIARAAEGNPWLFAQAKAALAGEPEP 251 Score = 62.2 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 3/109 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD-KSWVSRVAEVIDIP 76 VK + A+R + GA + + A R ++RV E + +P Sbjct: 142 VKFRRGWAEGDETAP-EFARRMEDAGACAIAVHGRYAEQLYRGRAEWGAIARVKEAVSVP 200 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 G ++S DA I G D + I A +P L + + Sbjct: 201 VVGNGDVRSGADAVAITERTGCDAVMIARAAEGNPWLFAQAKAALAGEP 249 >UniRef50_Q1Q3Q8 Strongly similar to tRNA-dihydrouridine synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3Q8_9BACT Length = 341 Score = 74.5 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 1/97 (1%) Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKV 196 G V ++ + +++ GA I ++ + +G D + + +V Sbjct: 153 GSLSVPVTGKIRLGWDHKTRNYIEVARILEENGASLIAVHGRTRSQYFSGAADWDAIAEV 212 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++ +P+IA+G ++ E + DG + Sbjct: 213 KQSVKIPVIANGDVRSVADIAEIKKRTACDGVMIGRA 249 Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + +A+ E GA + + T S D ++ V + + IP G ++S+ D A+ Sbjct: 175 IEVARILEENGASLIAVHGRTRSQYFSGAADWDAIAEVKQSVKIPVIANGDVRSVADIAE 234 Query: 92 ILS-FGADKISINSPALADPTLIT 114 I D + I A+ P + Sbjct: 235 IKKRTACDGVMIGRAAIGHPWIFR 258 >UniRef50_UPI0001BC5FF0 nitrogen regulation protein NIFR3 n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC5FF0 Length = 322 Score = 74.5 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 1/94 (1%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEH 215 L + ++ G I ++ + + G D +K+++E +P+I +G T E Sbjct: 140 ENYLQIAKIAEEAGCSHITVHGRTRAQLYTGLADWSLIKEIKEHVTIPVIGNGDIFTAEA 199 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 E D+ VDG + A I +++ L Sbjct: 200 AKEKIEDSGVDGVMLARGIFGNPWLIRDIREMLQ 233 Score = 69.9 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 4/106 (3%) Query: 33 VPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + +AK E G + + T + + D S + + E + IP G I + E A + Sbjct: 143 LQIAKIAEEAGCSHITVHGRTRAQLYTGLADWSLIKEIKEHVTIPVIGNGDIFTAEAAKE 202 Query: 92 ILS-FGADKISINSPALADPTLITRLAD--RFGVQCIVVGIDTWYD 134 + G D + + +P LI + + ++G V + D Sbjct: 203 KIEDSGVDGVMLARGIFGNPWLIRDIREMLQYGEVKTKVSTEDKID 248 >UniRef50_A6DPY9 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPY9_9BACT Length = 330 Score = 74.1 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 69/219 (31%), Gaps = 36/219 (16%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIP--FCVAGGIKSL--EDAAKILSFGADKISIN------ 103 S + +S ++ + DIP + G L E A ++ GAD + +N Sbjct: 41 RISSHKPSMRSLKKQIVKSGDIPLSVQIMGNNAELMAESAKLVVDCGADAVDVNMGCPTK 100 Query: 104 --------SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 S L DP L ++ Q K V Sbjct: 101 RAVKGGVGSAMLKDPKLCYQVLASMREQVPCALSAKIRAGFDNKEGVF------------ 148 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTME 214 + +Q + GA + ++ + G+ D + ++E +P+I +G T Sbjct: 149 -----EILQAIVDSGADYLAVHPRRRVDHYEGHSDWRIISALKEKSPIPVIGNGDVRTAA 203 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + F++ DG + + L+ Q V Sbjct: 204 DAVRMFKETQCDGVMIGRGALSNPWIFLQTSQVLSDQEV 242 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 2/98 (2%) Query: 32 IVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + + + + GAD L + D +S + E IP G +++ DA Sbjct: 147 VFEILQAIVDSGADYLAVHPRRRVDHYEGHSDWRIISALKEKSPIPVIGNGDVRTAADAV 206 Query: 91 KIL-SFGADKISINSPALADPTLITRLADRFGVQCIVV 127 ++ D + I AL++P + + + Q + + Sbjct: 207 RMFKETQCDGVMIGRGALSNPWIFLQTSQVLSDQEVFI 244 >UniRef50_B9NQS6 NifR3 family protein n=3 Tax=Rhodobacteraceae RepID=B9NQS6_9RHOB Length = 364 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 9/163 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW---YDAETGKYHV 142 E A ++ GA I IN A ++ + + ++ D +A + Sbjct: 119 AEAARQVADRGARVIDINMGCPA-----KKVTNGYSGSALLKTPDHALTLIEAVVAAVDI 173 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + D + Q G + ++ + G D + + V+E Sbjct: 174 PVTLKTRLGWDDSLLNAPDVARRAQDAGIQMVTIHGRTRCQFYKGRADWQAIGAVKEAVS 233 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 VP+IA+G A + DG + + + ++ Sbjct: 234 VPVIANGDITGPGAARTALDQSGADGVMVGRGAQGRPWLLAQI 276 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 40/115 (34%), Gaps = 5/115 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKS 64 ++ +D+ + + ++ +A+R + G + + T D Sbjct: 167 VVAAVDIPVTLKTRL--GWDDSLLNAP-DVARRAQDAGIQMVTIHGRTRCQFYKGRADWQ 223 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 + V E + +P G I A L GAD + + A P L+ ++ Sbjct: 224 AIGAVKEAVSVPVIANGDITGPGAARTALDQSGADGVMVGRGAQGRPWLLAQICH 278 >UniRef50_B7EB81 cDNA clone:J013037E09, full insert sequence n=3 Tax=Oryza sativa Japonica Group RepID=B7EB81_ORYSJ Length = 158 Score = 73.4 bits (179), Expect = 7e-12, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 11/150 (7%) Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + +L D G +V+ + + G+Y + + TL + Sbjct: 12 MNIERLKQLVDLVGKHRLVLDLSCRK--KDGRYAIVTDRWQKFSDVFVDEPTLKHLAAYA 69 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD--V 225 E +++ ++ +G R G D E ++ + +P+ +GG TM+ R + V Sbjct: 70 D----EFLVHGVDVEGKRLGIDEELVELLGRYSPIPVTYAGGVSTMDDLERIKRAGNSRV 125 Query: 226 DGALAASVF--HKQIINIGELKAYLATQGV 253 D S + ++ + Q + Sbjct: 126 D-VTVGSALDIFGGDLPYKDVVLWHKEQNM 154 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%) Query: 44 ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISIN 103 ADE + + + +D+ V + IP AGG+ +++D +I G ++ + Sbjct: 69 ADEFLVHGVDVEGKRLGIDEELVELLGRYSPIPVTYAGGVSTMDDLERIKRAGNSRVDVT 128 >UniRef50_B5FFW2 Putative imidazole glycerol phosphate synthase subunit hisf2 n=1 Tax=Vibrio fischeri MJ11 RepID=B5FFW2_VIBFM Length = 214 Score = 73.0 bits (178), Expect = 9e-12, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 74/216 (34%), Gaps = 13/216 (6%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDK-SWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + E DE+ D + K + P GGI+++E + Sbjct: 7 VINSLEEYQCDEIAIIRPVRKKDSLDIFKKDIIELQRLKTMTPVSFGGGIRTIEHLNSLN 66 Query: 94 SFGADKISINSPALA-DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + +++ +S L + LI + D FG Q I + K + Y S Sbjct: 67 NLPIERLIFSSAFLDENKELIGKAKDLFGHQAIQCLLPLLRK----KEELFVYHSSLSDY 122 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGT 212 + ++++ E+ EI+L +G N +D + V +I SGG G Sbjct: 123 VPIKEINIEFINELAN----EIILIDTKNEGKENKFDWSLIDDVPFDWK-KIIISGGIGK 177 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 EA + + V H +I LK + Sbjct: 178 -SCIAEAHKKKLASVLIDNKVLHT-EYSISGLKHAI 211 >UniRef50_B9SRY4 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9SRY4_RICCO Length = 272 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 38/253 (15%), Positives = 67/253 (26%), Gaps = 71/253 (28%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGD---------------IVPLAKRYAEEGADEL 47 A R PC+D+ G+ VK + + A Y E+G Sbjct: 46 AVRFRPCIDIHKGK-VKQIVGSTLRDSKEEDGSILVTNFVSDKSAAEFANLYEEDGLLGG 104 Query: 48 VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 + A + + V GGI ++++ + GA + + S Sbjct: 105 HVIMLGADPLSKAAAFEALH----AYPGGLQVGGGI-NVDNCLSYVEEGASHVIVTSYVF 159 Query: 108 ----ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 D + L G Q +V+ + AE Sbjct: 160 NNGQMDLERLKDLVHVVGKQRLVLDLSCRKKAEK-------------------------- 193 Query: 164 QEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF--LEAFR 221 ++ R G D E + + +P+ +GG M ++ Sbjct: 194 ---------------ISN--TRLGIDEELVALLGMHSPIPVTYAGGVTVMNDLERIKTAG 236 Query: 222 DADVDGALAASVF 234 VD S Sbjct: 237 KGRVD-VTVGSAL 248 >UniRef50_B9JF02 tRNA-dihydrouridine synthase protein n=12 Tax=Alphaproteobacteria RepID=B9JF02_AGRRK Length = 342 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 9/151 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW---YDAETGKYHV 142 E A GAD I IN A ++ + ++ D +A V Sbjct: 96 AEAAKIAADNGADIIDINMGCPA-----KKVIGGYSGSALMRDPDHALGLIEATVKAVDV 150 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + ++ G + ++ + G D + ++ VR+V Sbjct: 151 PVTLKMRLGWDENSINAPHIARRAEEAGIQLVTIHGRTRMQFYEGRADWDAIRAVRDVIS 210 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +PL+A+G T E E R + D + Sbjct: 211 IPLVANGDVDTPEDASEILRRSGADAVMVGR 241 Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 3/95 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + I +A+R E G + + T D + V +VI IP Sbjct: 155 KMRLGWDENSINAP-HIARRAEEAGIQLVTIHGRTRMQFYEGRADWDAIRAVRDVISIPL 213 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPT 111 G + + EDA++IL GAD + + P Sbjct: 214 VANGDVDTPEDASEILRRSGADAVMVGRGCQGRPW 248 >UniRef50_Q9F8I8 Cyclase (Fragment) n=1 Tax=Carboxydothermus hydrogenoformans RepID=Q9F8I8_CARHY Length = 114 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 5/84 (5%) Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 ++ GID + G T + ++W +EV++ GAGEI+L M++ Sbjct: 36 GSHVLCGIDAKRKKDGG-----FEVYIHGGRTPTGIDAVEWAKEVERLGAGEILLTSMDR 90 Query: 182 DGVRNGYDLEQLKKVREVCHVPLI 205 DG ++GYDLE +++ + +P+I Sbjct: 91 DGTKDGYDLELTREIADAVKIPVI 114 >UniRef50_Q6F288 TRNA dihydrouridine synthetase n=3 Tax=Mollicutes RepID=Q6F288_MESFL Length = 325 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 75/236 (31%), Gaps = 7/236 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIP 76 K VQ + L + E+GAD + + + S ++ + + Sbjct: 11 KLVQGPMAGVSNPPFRLISK--EKGADLVCAEMVSVEGMTHNNKKTFSMLAVEKKEHPMS 68 Query: 77 FCV-AGGIKSLEDAAKILSFGADKISIN-SPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + ++S A K + D I+ + P + R A + I Sbjct: 69 MQIFGNDVESFIVATKWIDENVDCDIIDLNIGCPAPKVAVRSASGSSLLKTPELIYDIVK 128 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 A ++ + ++K GA I ++ + +G D E++ Sbjct: 129 AVVENTSKPVTAKIRLGWDKESVNAVEVSKLIEKAGASGITVHGRTRSEFYSGHADWEKI 188 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 K+V+E ++P+I +G DG + + E+ +L Sbjct: 189 KEVKEAVNIPVIGNGDVIDGPSAKAMLELTGCDGVMISRGCQGNPWIFREIAHFLE 244 >UniRef50_B9MMW4 TIM-barrel protein, nifR3 family n=3 Tax=Clostridia RepID=B9MMW4_ANATD Length = 328 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 3/110 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + E I A E GA + + T + D + +V E + IP Sbjct: 135 VKIRKGFDDENINAP-EFAYILQESGASFVTVHGRTRAQLYSGKADWEIIRKVKEKLKIP 193 Query: 77 FCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCI 125 G I E A K AD I I AL +P + ++ + F + Sbjct: 194 VIANGDIVDFESAKKAYEVTRADSIMIGRAALGNPWVFLQIKEGFEKGYV 243 Score = 70.3 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 51/145 (35%), Gaps = 17/145 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 + +P+L ++ + A+ + V+ ++ Sbjct: 108 GCALMKNPSLAAKIVEE--------------VAKVSRKPVS--VKIRKGFDDENINAPEF 151 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 +Q+ GA + ++ + + +G D E ++KV+E +P+IA+G E +A+ Sbjct: 152 AYILQESGASFVTVHGRTRAQLYSGKADWEIIRKVKEKLKIPVIANGDIVDFESAKKAYE 211 Query: 222 DADVDGALAASVFHKQIINIGELKA 246 D + ++K Sbjct: 212 VTRADSIMIGRAALGNPWVFLQIKE 236 >UniRef50_Q8PX79 NifR3-like protein n=3 Tax=Methanosarcina RepID=Q8PX79_METMA Length = 323 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 1/95 (1%) Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTME 214 + +TL+ + ++K GA + ++ + +G +LE ++ V+ +P+IA+G E Sbjct: 152 EEKTLEIARLIEKAGASAVTVHGRTAAQMYSGNSNLEGIRAVKNELSIPVIANGDVKDEE 211 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 DG + +++ YL Sbjct: 212 SAERTLELTGCDGLMIGRAAMGNPFIFKKIRHYLE 246 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 2/112 (1%) Query: 33 VPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + +A+ + GA + + TA+ + + V + IP G +K E A + Sbjct: 156 LEIARLIEKAGASAVTVHGRTAAQMYSGNSNLEGIRAVKNELSIPVIANGDVKDEESAER 215 Query: 92 ILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 L G D + I A+ +P + ++ + + E ++ Sbjct: 216 TLELTGCDGLMIGRAAMGNPFIFKKIRHYLETGEKLGADKPFRQLEDFNSYI 267 >UniRef50_Q3A324 Dihydrouridine synthase n=10 Tax=Desulfuromonadales RepID=Q3A324_PELCD Length = 342 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 17/159 (10%), Positives = 47/159 (29%), Gaps = 22/159 (13%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 K++ GA S + P + ++ H+ Sbjct: 120 VKKVVRSGA-----GSALMQTPARVAQIIAAMRRAT----------------HLPLTVKI 158 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 + + L+ ++ G I L+ + +G + + + +++ +P+I S Sbjct: 159 RAGWDASHINFLEIAHIAEQEGVDAITLHPRTRSQGFSGSANWDLIAELKRRSTIPVIGS 218 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G ++ + D + + ++ A Sbjct: 219 GDIFEAQYAQRMLQQTGCDAVMIGRGCYGNPWLARDILA 257 Score = 69.9 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 4/120 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIP 76 VK + I + + +A +EG D + + T S + ++ + IP Sbjct: 156 VKIRAGWDASHI-NFLEIAHIAEQEGVDAITLHPRTRSQGFSGSANWDLIAELKRRSTIP 214 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLAD-RFGVQCIVVGIDTWYD 134 +G I + A ++L G D + I +P L + R G V + D Sbjct: 215 VIGSGDIFEAQYAQRMLQQTGCDAVMIGRGCYGNPWLARDILAMRQGQTPAPVTPEERCD 274 >UniRef50_A9UTQ9 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UTQ9_MONBE Length = 328 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK- 91 V L +R GA + + T + + V + V + + +P G I +L+DA + Sbjct: 163 VELVRRAEAMGAAWISVHGRTPAERHQPVHYDMLKLVKDSVSVPVVANGDIFTLKDADRV 222 Query: 92 ILSFGADKISINSPALADPTLIT 114 G D I LA+P L Sbjct: 223 WNETGCDGIMAARGLLANPGLFE 245 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 39/93 (41%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI 205 + R R T ET++ V+ + GA I ++ + LK V++ VP++ Sbjct: 149 VSVKVRIRDTAAETVELVRRAEAMGAAWISVHGRTPAERHQPVHYDMLKLVKDSVSVPVV 208 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 A+G T++ + + DG +AA Sbjct: 209 ANGDIFTLKDADRVWNETGCDGIMAARGLLANP 241 >UniRef50_A2EF32 Dihydrouridine synthase, putative n=1 Tax=Trichomonas vaginalis RepID=A2EF32_TRIVA Length = 318 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 61/191 (31%), Gaps = 24/191 (12%) Query: 50 YDITASSDGRVVDKSWV----SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 + + A G D+ + +A+ D V G + A +G + Sbjct: 73 HPLIAQIAGSNEDQDLIVAAAKDLAKYADG-VDVNLG--CTQKIASRSEYGYFMVDNCQK 129 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 L RL + V++ T+D+ ++ Sbjct: 130 REKTLELFRRLCKEV----------------NCPICAKIRIFIDDSGEVSEKITIDFAKK 173 Query: 166 VQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 +++ G + ++ + + E +K + + ++P++A+GG T+E + + Sbjct: 174 LEEAGVSLLQVHGRAEHRNKQADVYNEIIKHIVQAVNIPVVANGGINTVEDAHKFMEETG 233 Query: 225 VDGALAASVFH 235 G A Sbjct: 234 AAGVSVAQALL 244 Score = 63.3 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDK-SWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + AK+ E G L + + + + + + ++IP GGI ++EDA K Sbjct: 168 IDFAKKLEEAGVSLLQVHGRAEHRNKQADVYNEIIKHIVQAVNIPVVANGGINTVEDAHK 227 Query: 92 IL-SFGADKISINSPALADPTLIT 114 + GA +S+ L DPT Sbjct: 228 FMEETGAAGVSVAQALLKDPTAFD 251 >UniRef50_B0UHM8 TIM-barrel protein, nifR3 family n=6 Tax=Rhizobiales RepID=B0UHM8_METS4 Length = 358 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 35/121 (28%), Gaps = 1/121 (0%) Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 A V D + + G + ++ + G D + Sbjct: 144 AVREAVAVPVTVKMRLGWDDASRNAPDLARRAEALGLSAVTVHGRTRQQFYAGRADWAAI 203 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + V E +P++A+G G++ ++ + + +G + A L Sbjct: 204 RAVVEAVSIPVVANGDVGSLAEARACLAESGAAAVMIGRAAVGRPWLVGAVAAGLRGAPA 263 Query: 254 E 254 Sbjct: 264 P 264 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 3/109 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + LA+R G + + T D + + V E + IP Sbjct: 155 VKMRLGWDDASRNAP-DLARRAEALGLSAVTVHGRTRQQFYAGRADWAAIRAVVEAVSIP 213 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQC 124 G + SL +A L GA + I A+ P L+ +A Sbjct: 214 VVANGDVGSLAEARACLAESGAAAVMIGRAAVGRPWLVGAVAAGLRGAP 262 >UniRef50_B0TBQ2 Dihydrouridine synthase tim-barrel nifr3 family protein n=3 Tax=Clostridiales RepID=B0TBQ2_HELMI Length = 331 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 46/168 (27%), Gaps = 9/168 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD---AETGKYHV 142 E A + + GA I IN A ++ C++ D D A V Sbjct: 88 AEAARIVEAAGASIIDINMGCPA-----PKIVRNGEGACLLKTPDLAVDIAEAVVRAVQV 142 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + + ++ G + ++ ++ +G D + + Sbjct: 143 PVTVKMRIGWSSGRIVAPELAPRLEAVGVQALTVHGRTREMFYSGQADWSVIAETVRQVS 202 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +P+I +G + L + + L + Sbjct: 203 IPVIGNGDVWEPDDALRMLVETGCAAVMIGRGCMGNPWIFSRLVHWAE 250 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 3/104 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + I LA R G L + T D S ++ + IP Sbjct: 146 VKMRIGWSSGRIVAP-ELAPRLEAVGVQALTVHGRTREMFYSGQADWSVIAETVRQVSIP 204 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADR 119 G + +DA ++L G + I + +P + +RL Sbjct: 205 VIGNGDVWEPDDALRMLVETGCAAVMIGRGCMGNPWIFSRLVHW 248 >UniRef50_C3MBL4 tRNA-dihydrouridine synthase n=1 Tax=Rhizobium sp. NGR234 RepID=C3MBL4_RHISN Length = 342 Score = 71.0 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 9/151 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW---YDAETGKYHV 142 E A + + GAD + IN A ++ + ++ D +A V Sbjct: 95 AEAAKIVEANGADIVDINMGCPA-----KKVTGGYSGSALMRDPDHALSLIEATVKAVRV 149 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + ++ G I ++ + NG D + ++ VR+V Sbjct: 150 PVTLKMRLGWDENSINAPLIARRAEEAGVQAITIHGRTRMQFYNGNADWDAIRAVRDVIS 209 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +PLIA+G T+ +E R + D + Sbjct: 210 IPLIANGDVDTIADAMEILRRSGADAVMLGR 240 Score = 60.6 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 3/95 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + I + +A+R E G + + T D + V +VI IP Sbjct: 154 KMRLGWDENSINAPL-IARRAEEAGVQAITIHGRTRMQFYNGNADWDAIRAVRDVISIPL 212 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPT 111 G + ++ DA +IL GAD + + P Sbjct: 213 IANGDVDTIADAMEILRRSGADAVMLGRSCQGRPW 247 >UniRef50_C1ZB06 tRNA-dihydrouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZB06_PLALI Length = 381 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 18/179 (10%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS--SDGRVVDKSWVSRVAEVIDI 75 VK + + + + LA+++ E GA + + T + G+V + + VA V I Sbjct: 178 VKMRLGWDAQSLSAPL-LARQFEEVGAAAITIHGRTRAQGFSGKVSREGIAATVAAVQSI 236 Query: 76 PFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRLAD-----RFGVQCIVVGI 129 P G ++++EDA + G ++I A+ DP + +L D ++ I Sbjct: 237 PVIGNGDVRTVEDAISMRRETGCAAVAIGRGAMLDPWIFRKLHDFEMTGQYAEPGPEEQI 296 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQW---------ETLDWVQEVQKRGAGEIVLNMM 179 + + W + D ++ V+ E ++ + Sbjct: 297 QFLVTHFREMVDLFGEQATRLFRKFAGWYGARLGIPQDLEDRLRRVESLSEFEEIVAEI 355 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 12/110 (10%), Positives = 30/110 (27%), Gaps = 2/110 (1%) Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE 198 + ++ ++ GA I ++ + +G E + Sbjct: 172 VSIPVTVKMRLGWDAQSLSAPLLARQFEEVGAAAITIHGRTRAQGFSGKVSREGIAATVA 231 Query: 199 VC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +P+I +G T+E + R+ +L + Sbjct: 232 AVQSIPVIGNGDVRTVEDAISMRRETGCAAVAIGRGAMLDPWIFRKLHDF 281 >UniRef50_Q5M689 Possible transcriptional regulator n=25 Tax=Streptococcus RepID=Q5M689_STRT2 Length = 350 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 54/173 (31%), Gaps = 7/173 (4%) Query: 79 VAGGIKSLEDAAKIL--SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + L+ AA + + AD + IN + + ++ I Sbjct: 104 FGGDAEGLKRAADFIQTNTKADIVDINMGCPVNKVVKNEAGAKWLKDP--DKIYHIVKEV 161 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKK 195 T + + + ++ + G + ++ ++ + G+ D E L + Sbjct: 162 TSVLDIPLTVKMRTGWSDSDL-AVENALAAESAGVSALAMHGRTREQMYTGHCDHETLAR 220 Query: 196 VREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 V + +P I +G ++ + VD + ++ + Sbjct: 221 VAKAITKIPFIGNGDVRNVQDAKLMIEELGVDAVMVGRAAMNNPYIFTQINHF 273 Score = 60.3 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 5/136 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEV-IDI 75 VK + + V A G L + T D ++RVA+ I Sbjct: 171 VKMRTGWSDSDLA--VENALAAESAGVSALAMHGRTREQMYTGHCDHETLARVAKAITKI 228 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 PF G +++++DA ++ G D + + A+ +P + T++ F + + Sbjct: 229 PFIGNGDVRNVQDAKLMIEELGVDAVMVGRAAMNNPYIFTQINHFFETGEELPDLPFDKK 288 Query: 135 AETGKYHVNQYTGDES 150 + + H+ + + Sbjct: 289 LDIAEDHLKRLVDLKG 304 >UniRef50_A8Y3E7 Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8Y3E7_CAEBR Length = 283 Score = 70.7 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 46/137 (33%), Gaps = 15/137 (10%) Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 S L+ P L+ + T + V+ T +D Sbjct: 91 FGSALLSKPELLADMVR-----------QTRARISDENFSVSLKIRVNKEIEKT----VD 135 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 ++ + G + ++ D+E ++ V+ VP+IA+GG ++ + Sbjct: 136 LCRKAESAGVTHLTVHGRTPSQHAEPIDIEAIRLVKSAVKVPIIANGGITNLQEAMNLAE 195 Query: 222 DADVDGALAASVFHKQI 238 VDG +AA+ Sbjct: 196 KTGVDGIMAANGLLDNP 212 Score = 63.7 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 1/83 (1%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 V L ++ G L + T S +D + V + +P GGI +L++A + Sbjct: 134 VDLCRKAESAGVTHLTVHGRTPSQHAEPIDIEAIRLVKSAVKVPIIANGGITNLQEAMNL 193 Query: 93 LS-FGADKISINSPALADPTLIT 114 G D I + L +P L Sbjct: 194 AEKTGVDGIMAANGLLDNPALFA 216 >UniRef50_C9RMP3 Dihydrouridine synthase DuS n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMP3_FIBSS Length = 392 Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 9/152 (5%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 +++ K EG + L + T + + W+ +VA IP G + S+ Sbjct: 168 DSINVMETLKIAEGEGVEMLTVHGRTRLQGYNGLANWDWIGKVAAAAKIPVIGNGDVNSV 227 Query: 87 EDAAKILSF-GADKISINSPALADPTLITRLADRF-GVQCIVVGIDTWYDAETGKYHVNQ 144 E A + ++ G +SI A+ +P + ++AD + G + V+ D Y Sbjct: 228 ECARERINTYGVSGVSIGRGAMHNPWIFGQIADAWEGREKHVITAQEALDVFPLYYKFKI 287 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 G T+ + ++++ R VL Sbjct: 288 EDG------ATEMNAMGRMKQLAARLCKGFVL 313 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 35/116 (30%), Gaps = 1/116 (0%) Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-Y 188 D + + ++ ++ + G + ++ + NG Sbjct: 143 DVKAVLDAKTPEIPLTLKCRIGWDDDSINVMETLKIAEGEGVEMLTVHGRTRLQGYNGLA 202 Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + + + KV +P+I +G ++E E V G G++ Sbjct: 203 NWDWIGKVAAAAKIPVIGNGDVNSVECARERINTYGVSGVSIGRGAMHNPWIFGQI 258 >UniRef50_B8FH09 Dihydrouridine synthase DuS n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FH09_DESAA Length = 328 Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 10/114 (8%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSW 65 IP + VK V +A+ + +EGAD L+F+ A R + Sbjct: 136 IPVI-------VKFRTGWKD-DPAHAVSMARLFCDEGADALIFHPRVAPDLRTRPPKWEY 187 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 + V + + +P G + SL+DAAK+LS G D +++ ALA P ++ + + Sbjct: 188 IGLVKDAVKVPVFGNGNVISLDDAAKMLSMSGCDGVALGRIALAQPWIMAQWSQ 241 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 48/153 (31%), Gaps = 11/153 (7%) Query: 86 LEDAAKILSFGADKISINSP----ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 + A +I + G + IN A+ L + + VV A Sbjct: 82 AKAAERIEAEGFFGVDINCGCSARAICRFDSGAALLAKPDLAAQVV--RAVRKAVNIPVI 139 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN-MMNQDGVRNGYDLEQLKKVREVC 200 V TG + + + GA ++ + + D E + V++ Sbjct: 140 VKFRTGWKDDPAH----AVSMARLFCDEGADALIFHPRVAPDLRTRPPKWEYIGLVKDAV 195 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 VP+ +G +++ + + DG + Sbjct: 196 KVPVFGNGNVISLDDAAKMLSMSGCDGVALGRI 228 >UniRef50_O95620 tRNA-dihydrouridine synthase 4-like n=40 Tax=Metazoa RepID=DUS4L_HUMAN Length = 317 Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 1/83 (1%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 V L ++ G + + TA + V + + E + IP G I+SL++A + Sbjct: 169 VDLCQKAEATGVSWITVHGRTAEERHQPVHYDSIKIIKENMSIPVIANGDIRSLKEAENV 228 Query: 93 LS-FGADKISINSPALADPTLIT 114 G D + + LA+P + Sbjct: 229 WRITGTDGVMVARGLLANPAMFA 251 Score = 63.7 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 10/171 (5%) Query: 74 DIPFCV---AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV---QCIVV 127 D P V A + L DAA+I+ A+ I IN +A+ +G + Sbjct: 81 DCPLIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWA----MAEGYGACLINKPEL 136 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 D + R T+D Q+ + G I ++ + Sbjct: 137 VQDMVKQVRNQVETPGFSVSIKIRIHDDLKRTVDLCQKAEATGVSWITVHGRTAEERHQP 196 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + +K ++E +P+IA+G +++ +R DG + A Sbjct: 197 VHYDSIKIIKENMSIPVIANGDIRSLKEAENVWRITGTDGVMVARGLLANP 247 >UniRef50_A0LJ96 Putative TIM-barrel protein, nifR3 family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJ96_SYNFM Length = 352 Score = 70.3 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 21/179 (11%), Positives = 56/179 (31%), Gaps = 13/179 (7%) Query: 73 IDIPFCVAGGIKSLE---DAAKILSFGADKISINSPALADPTLITRLADRF---GVQCIV 126 + + V G + +AA+++ G + + ++ + A + Sbjct: 78 VPLAVQVFG--RDPAVMAEAARLVEQGGAALIDINAGCPVRKVVRQGAGAILLKDPDRLA 135 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 ++ A + V G ++ +++ G I ++ + + Sbjct: 136 AMVEAVKRAVSVPVTVKIRVGWDNAANG----VAGLARQLVSAGVDAITVHGRTAAQMYS 191 Query: 187 G-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 G D ++ +V+ VP+I +G + E + DG + + Sbjct: 192 GRADWSRIAEVKAAVAVPVIGNGDVTSPELAERMIHETGCDGVMIGRASLGNPWLFAVI 250 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Query: 35 LAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA++ G D + + TA+ D S ++ V + +P G + S E A +++ Sbjct: 167 LARQLVSAGVDAITVHGRTAAQMYSGRADWSRIAEVKAAVAVPVIGNGDVTSPELAERMI 226 Query: 94 -SFGADKISINSPALADPTLITRLADRFGVQ 123 G D + I +L +P L ++ R+G Sbjct: 227 HETGCDGVMIGRASLGNPWLFAVISRRWGRG 257 >UniRef50_Q9KV66 tRNA-dihydrouridine synthase B n=56 Tax=Proteobacteria RepID=DUSB_VIBCH Length = 322 Score = 70.3 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 20/183 (10%) Query: 82 GIKSL-----------EDAAKILSFGADKISIN---SPALADPTLITRLADRFGVQCIVV 127 GI+S+ E A + GA I IN + L R+ V Sbjct: 65 GIRSVQIAGSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPD----V 120 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 D L Q + G + L+ + + G Sbjct: 121 IEDILKAVVNAVNVPVTLKTRTGWDTD-NKNCLSIAQLAEDCGIQALALHGRTRACMYKG 179 Query: 188 -YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + +K V+ +P+IA+G + E D + + E++ Sbjct: 180 EAEYDSIKAVKAAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQH 239 Query: 247 YLA 249 +L Sbjct: 240 FLE 242 Score = 64.1 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 2/86 (2%) Query: 33 VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + +A+ + G L + T + + + V + IP G I S E A Sbjct: 152 LSIAQLAEDCGIQALALHGRTRACMYKGEAEYDSIKAVKAAVSIPVIANGDIDSPEKARY 211 Query: 92 ILS-FGADKISINSPALADPTLITRL 116 +L GAD + I PA P + + Sbjct: 212 VLEYTGADALMIGRPAQGRPWIFQEI 237 >UniRef50_A7AQM0 Dihydrouridine synthase, putative n=1 Tax=Babesia bovis RepID=A7AQM0_BABBO Length = 355 Score = 70.3 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 57/167 (34%), Gaps = 13/167 (7%) Query: 85 SLEDAAKILSFGADKISI----NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 ++ AA++L + + D + L D + +V T + Sbjct: 80 TITQAARLLKGHVSAVDLNLGCPQAIAKDGHYGSFLLDEPDLVTGIVSRVTR------EV 133 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ--DGVRNGY-DLEQLKKVR 197 + + + TL+ +++ G + ++ ++ G G D + ++ ++ Sbjct: 134 GIAVTCKIRKVDKDSLQSTLNLCYSLEQSGCKALTVHGRHRSEKGTNVGAADWDAIRIIK 193 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 +P+IA+GG T D +++ ++ + Sbjct: 194 SRLRIPVIANGGIETFADVERCLSYTGADAVMSSESLLERPYLFSGI 240 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 4/88 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVV---DKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + L + G L + S G V D + + + IP GGI++ D Sbjct: 153 LNLCYSLEQSGCKALTVHGRHRSEKGTNVGAADWDAIRIIKSRLRIPVIANGGIETFADV 212 Query: 90 AKILS-FGADKISINSPALADPTLITRL 116 + LS GAD + + L P L + + Sbjct: 213 ERCLSYTGADAVMSSESLLERPYLFSGI 240 >UniRef50_P41504 Probable tRNA-dihydrouridine synthase n=93 Tax=Alphaproteobacteria RepID=DUS_RHILP Length = 317 Score = 70.3 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 48/151 (31%), Gaps = 9/151 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW---YDAETGKYHV 142 E A GAD I IN A ++ + ++ D +A + Sbjct: 74 AEAAKIAADHGADIIDINMGCPA-----KKVIGGYSGSALMRDPDHALGLIEATVKAVDI 128 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 D + + G + ++ + G D + ++ VREV Sbjct: 129 PVTLKMRLGWDENSINAPDIARRAEASGIQLVTIHGRTRMQFYEGRADWDAIRAVREVIS 188 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 VPLIA+G T E R + D + Sbjct: 189 VPLIANGDVETAHDAQEILRRSGADAVMIGR 219 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 3/95 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + I +A+R G + + T D + V EVI +P Sbjct: 133 KMRLGWDENSINAP-DIARRAEASGIQLVTIHGRTRMQFYEGRADWDAIRAVREVISVPL 191 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPT 111 G +++ DA +IL GAD + I P Sbjct: 192 IANGDVETAHDAQEILRRSGADAVMIGRGCQGRPW 226 >UniRef50_A4EC62 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4EC62_9ACTN Length = 347 Score = 70.3 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 18/154 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S + P L ++ + A G HV + Sbjct: 121 GSALMRTPDLAEKIVE----------------AAVGAAHVPVTVKIRKGFYAEDRNAATF 164 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 Q ++ GA + ++ + G D + +V + +P+I SG + E E + Sbjct: 165 AQMLEGAGAAAVAVHGRCATQLYTGQADWSVVDEVADAVEIPVIGSGDVFSAEDAAEHLQ 224 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 + A + G+ +A LA G + Sbjct: 225 GSGASAVFIARGIYGNPWVFGDARA-LALDGTPV 257 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + E + A+ GA + + A+ D S V VA+ ++IP Sbjct: 148 VKIRKGFYAEDR-NAATFAQMLEGAGAAAVAVHGRCATQLYTGQADWSVVDEVADAVEIP 206 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 +G + S EDAA+ L GA + I +P + Sbjct: 207 VIGSGDVFSAEDAAEHLQGSGASAVFIARGIYGNPWVFGDA 247 >UniRef50_Q6MNE9 Nitrogen regulation protein nifR3 n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNE9_BDEBA Length = 352 Score = 69.9 bits (170), Expect = 8e-11, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 2/150 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E +++ +GA+ I IN L + V+ Sbjct: 90 AESVKRLVEWGAEAIDINMGCPVQKALKHNYGVALMGDPAYAAEVVRMTVKNSTVPVSVK 149 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 T+ E L +V +++ GA + L+ R G D EQ+K++ + P+ Sbjct: 150 LRAVGSTKEFD-ELLTFVSGLRQSGAAWVCLHPRTAAQKRRGNADWEQIKQLHKAVDFPV 208 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVF 234 I +G T + + ++ D A+A Sbjct: 209 IGNGDVQTYDDAINMLKETGCDMAMAGRGL 238 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 2/111 (1%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIP 76 VK + + +++ + GA + + TA+ R D + ++ + +D P Sbjct: 148 VKLRAVGSTKEFDELLTFVSGLRQSGAAWVCLHPRTAAQKRRGNADWEQIKQLHKAVDFP 207 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIV 126 G +++ +DA +L G D A P ++ +L + G Sbjct: 208 VIGNGDVQTYDDAINMLKETGCDMAMAGRGLAARPWMMWQLGEELGFAPPA 258 >UniRef50_D1YXT1 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YXT1_METPS Length = 376 Score = 69.5 bits (169), Expect = 9e-11, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 13/129 (10%) Query: 1 MLAKRIIPCL-----DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS 55 ML RI L D++ VV ++ R+ + D V LA+ + G D L A Sbjct: 136 MLKDRI--ALARLVSDIKKTGVVLSLKMRSGAV--DDVKLARILEKAGLDILHV---DAM 188 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 R + + + ++ + + + + E A + S G+D +S+ A+A+P LI Sbjct: 189 GM-RGTNLNAIKKLRDSTTLFIIGNNSVNNYETAQAMYSAGSDMVSVARAAMANPKLIKG 247 Query: 116 LADRFGVQC 124 + Q Sbjct: 248 IVSYIEDQQ 256 >UniRef50_B8GW86 tRNA-dihydrouridine synthase n=7 Tax=Alphaproteobacteria RepID=B8GW86_CAUCN Length = 335 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 61/203 (30%), Gaps = 15/203 (7%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 ++ G + + + V +D A GA+ I +N P Sbjct: 61 RAAVGEGLPLTVIQLVGRDVDFMAQG---------ARMAQEAGAEIIDLN---FGCPAKE 108 Query: 114 TRLADRFGVQCI--VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 G + + A V + D + + GA Sbjct: 109 VAAGAACGSALMREPDLAEALVAAAVEAVDVPVTVKMRLGWDIDCLNAPDIARRAEAAGA 168 Query: 172 GEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 + ++ ++ G D + V++ VP++ +G E +A + DG + Sbjct: 169 KAVTVHGRTRNQFYKGVADWTAVAAVKQAVSVPVLVNGDIVDGETARQALEQSGADGVMI 228 Query: 231 ASVFHKQIINIGELKAYLATQGV 253 + + G ++A L +G Sbjct: 229 GRGVYGRPWIAGAIEAALEGRGF 251 Score = 60.3 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 3/110 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIP 76 VK + + + +A+R GA + + T V D + V+ V + + +P Sbjct: 143 VKMRLGWDIDCLNAP-DIARRAEAAGAKAVTVHGRTRNQFYKGVADWTAVAAVKQAVSVP 201 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 V G I E A + L GAD + I P + + + Sbjct: 202 VLVNGDIVDGETARQALEQSGADGVMIGRGVYGRPWIAGAIEAALEGRGF 251 >UniRef50_Q88DK5 tRNA-dihydrouridine synthase B n=460 Tax=Proteobacteria RepID=DUSB_PSEPK Length = 337 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 39/116 (33%), Gaps = 1/116 (0%) Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 A V + L+ + ++ G + ++ + + G + + + Sbjct: 130 AVVSAVDVPVTLKIRTGWDRANKNGLNVAKIAEQAGIQALAVHGRTRADLYTGEAEYDTI 189 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +++ +P+ A+G + E VDG L + E++ YL Sbjct: 190 GAIKQAVSIPVFANGDITSPEKARAVLETTGVDGLLIGRAAQGRPWIFREIEHYLR 245 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 2/86 (2%) Query: 33 VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + +AK + G L + T + + + + + + IP G I S E A Sbjct: 155 LNVAKIAEQAGIQALAVHGRTRADLYTGEAEYDTIGAIKQAVSIPVFANGDITSPEKARA 214 Query: 92 ILS-FGADKISINSPALADPTLITRL 116 +L G D + I A P + + Sbjct: 215 VLETTGVDGLLIGRAAQGRPWIFREI 240 >UniRef50_C0GJW0 TIM-barrel protein, nifR3 family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJW0_9FIRM Length = 319 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 1/105 (0%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 ++ ++ VQ+ GA + ++ + +G D + +V+E VP+ Sbjct: 138 VKMRKGWDDSEVNAVEVALAVQEAGAAAVTVHGRTRAQGYSGRADWSVIARVKEALRVPV 197 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + +G + + D + A + I YL Sbjct: 198 VGNGDIWEPQDAQRMLQQTGCDAVMLARGVLGNLWLIRRTVHYLE 242 Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 3/103 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + + V +A E GA + + T + D S ++RV E + +P Sbjct: 138 VKMRKGWDDSEV-NAVEVALAVQEAGAAAVTVHGRTRAQGYSGRADWSVIARVKEALRVP 196 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLAD 118 G I +DA ++L G D + + L + LI R Sbjct: 197 VVGNGDIWEPQDAQRMLQQTGCDAVMLARGVLGNLWLIRRTVH 239 >UniRef50_B1ZWU6 TIM-barrel protein, nifR3 family n=6 Tax=Verrucomicrobia RepID=B1ZWU6_OPITP Length = 370 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 22/197 (11%), Positives = 56/197 (28%), Gaps = 16/197 (8%) Query: 51 DITASSDGRVVDKSWVSRVAEVI---DIPFCVAGGIKSL--EDAAKILSFGADKISINSP 105 D+ + + + + VA + + G + + + A GA + IN Sbjct: 41 DLVNARSLLERNPAALKLVASSAEDRPMSIQLFGSVPTEMRDAARICEDLGAQAVDINMG 100 Query: 106 ALADPTLITRLADRFGVQCIVVGID---TWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 + ++ G ++ ++ + D Sbjct: 101 CP-----VRKVVRVGGGSAMMTELNQTAALVRGMIEAVKIPVTAKMRLGWDDENLTAPDL 155 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAF 220 + ++ G + ++ + +G +L + V + +P+I +G T E Sbjct: 156 ARVLEDAGVAAVFVHGRTRAQGFSGTVNLAGIAAVVQAVKRIPVIGNGDVTTPEAARAMI 215 Query: 221 RDADVDGALAAS-VFHK 236 G F+ Sbjct: 216 EQTGCAGVSIGRGAFYD 232 Score = 64.9 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 4/135 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVID-IP 76 K + E + LA+ + G + + T + V+ + ++ V + + IP Sbjct: 140 KMRLGWDDENLTAP-DLARVLEDAGVAAVFVHGRTRAQGFSGTVNLAGIAAVVQAVKRIP 198 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + + E A ++ G +SI A DP + R + Sbjct: 199 VIGNGDVTTPEAARAMIEQTGCAGVSIGRGAFYDPWIFRRTHHLLTSGELWPEPGFDERV 258 Query: 136 ETGKYHVNQYTGDES 150 + H +Y Sbjct: 259 RVMRRHFERYCEFYG 273 >UniRef50_B9JW92 Nitrogen regulation protein n=4 Tax=Rhizobiales RepID=B9JW92_AGRVS Length = 332 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 49/152 (32%), Gaps = 9/152 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW---YDAETGKYHV 142 E A + GAD I IN A ++ + ++ + +A + Sbjct: 88 AEAAKIAEANGADIIDINMGCPA-----KKVIGGYAGSALMREPEIALAMIEATVKAVSI 142 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 D + Q G I ++ + G D + + VR+ + Sbjct: 143 PVTVKMRLGWDSDSINAPDLSRRAQDAGVQAITVHGRTRMQFYEGRADWDAIAAVRDAIY 202 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +PLIA+G T+ E R + D + Sbjct: 203 IPLIANGDIDTLGDAQEILRRSGADAIMLGRA 234 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 3/96 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + + I L++R + G + + T D ++ V + I IP Sbjct: 146 VKMRLGWDSDSINAP-DLSRRAQDAGVQAITVHGRTRMQFYEGRADWDAIAAVRDAIYIP 204 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPT 111 G I +L DA +IL GAD I + P Sbjct: 205 LIANGDIDTLGDAQEILRRSGADAIMLGRACQGRPW 240 >UniRef50_A8ZYE4 Putative TIM-barrel protein, nifR3 family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYE4_DESOH Length = 326 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 45/182 (24%), Gaps = 26/182 (14%) Query: 77 FCVAG----GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +G I KIL GA + + D L + Sbjct: 86 VQASGAHMIDINFGCSVKKILKSGA-----GAALMKDLPLAAEVIQAVRDA--------- 131 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLE 191 + S + + + RG + L+ G D Sbjct: 132 -------VSIPLTIKMRSGWNPDGSDAFHLAEIAEARGVNAVALHPRTATQGFGGTADWS 184 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + +++ +P+I +G E D + ++ A LA + Sbjct: 185 LIAALKQRTGLPVIGNGDIVLPEDARRMLDQTGCDAVMVGRAAIGAPWIFKQINACLAGK 244 Query: 252 GV 253 V Sbjct: 245 PV 246 Score = 67.2 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 3/111 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIP 76 +K N D LA+ G + + + TA+ G D S ++ + + +P Sbjct: 138 IKMRSGWNP-DGSDAFHLAEIAEARGVNAVALHPRTATQGFGGTADWSLIAALKQRTGLP 196 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIV 126 G I EDA ++L G D + + A+ P + ++ + +V Sbjct: 197 VIGNGDIVLPEDARRMLDQTGCDAVMVGRAAIGAPWIFKQINACLAGKPVV 247 >UniRef50_Q14SX5 Putative dihydrouridine synthase n=6 Tax=Clostridiales RepID=Q14SX5_RUMFL Length = 332 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 5/119 (4%) Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLE 191 A V +G S + + + ++ G I ++ +D +G D+ Sbjct: 134 KAAGDTPVTVKIRSGWSSDS----INAPEMARALEASGTAAIAVHGRTRDMFYSGQSDMN 189 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +K V+E VP+I +G E E + D + + E+ A + Sbjct: 190 VIKAVKEAVSVPVIGNGDITDAESCAEMYGRTGCDLVMIGRGSYGNPFIFREIAARMEG 248 Score = 66.4 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 3/109 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIP 76 VK + + I +A+ G + + T D + + V E + +P Sbjct: 143 VKIRSGWSSDSINAP-EMARALEASGTAAIAVHGRTRDMFYSGQSDMNVIKAVKEAVSVP 201 Query: 77 FCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 G I E A G D + I + +P + +A R Sbjct: 202 VIGNGDITDAESCAEMYGRTGCDLVMIGRGSYGNPFIFREIAARMEGSE 250 >UniRef50_Q4UGK9 Putative uncharacterized protein n=2 Tax=Theileria RepID=Q4UGK9_THEAN Length = 359 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGY---DLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 VQ Q G + ++ ++ + D + +K ++ ++P+IA+GG T E Sbjct: 158 VQSCQANGCKALTVHGRHRSETKTRISECDWDSIKIIKSRVNIPVIANGGIETFEDVKRC 217 Query: 220 FRDADVDGALAASVFHKQIINIG 242 D +++ + Sbjct: 218 LDYTGADAVMSSEAILENPYLFS 240 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 4/82 (4%) Query: 36 AKRYAEEGADELVFYDITASSDGRVV---DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + G L + S + D + + ++IP GGI++ ED + Sbjct: 158 VQSCQANGCKALTVHGRHRSETKTRISECDWDSIKIIKSRVNIPVIANGGIETFEDVKRC 217 Query: 93 LS-FGADKISINSPALADPTLI 113 L GAD + + L +P L Sbjct: 218 LDYTGADAVMSSEAILENPYLF 239 >UniRef50_C5WE57 tRNA-dihydrouridine synthase n=42 Tax=Streptococcus RepID=C5WE57_STRDG Length = 354 Score = 68.3 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 55/175 (31%), Gaps = 11/175 (6%) Query: 79 VAGGIKSLEDAAKIL--SFGADKISINSPALADPTLITRLADRF--GVQCIVVGIDTWYD 134 G + L+ AA + + AD + IN + + ++ I + Sbjct: 108 FGGDAEGLKRAADFIQTNTKADIVDINMGCPVNKVVKNEAGAKWLRDPDKIYHIVKEVTS 167 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 V TG + ++ + G + ++ ++ + G D E L Sbjct: 168 VLDIPLTVKMRTGWADSSL-----AVENALAAESAGVSALAMHGRTREQMYTGTCDHETL 222 Query: 194 KKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +V + +P I +G +++ + VD + ++ + Sbjct: 223 ARVSKAITKIPFIGNGDVRSVQDAKFMIEEIGVDAVMIGRAAMNNPYLFTQINHF 277 Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 5/129 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEV-IDI 75 VK + V A G L + T D ++RV++ I Sbjct: 175 VKMRTGWADSSLA--VENALAAESAGVSALAMHGRTREQMYTGTCDHETLARVSKAITKI 232 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 PF G ++S++DA ++ G D + I A+ +P L T++ F + + Sbjct: 233 PFIGNGDVRSVQDAKFMIEEIGVDAVMIGRAAMNNPYLFTQINHFFETGQELPDLPFAKK 292 Query: 135 AETGKYHVN 143 + K H+ Sbjct: 293 LDIAKDHLK 301 >UniRef50_Q2LR94 TRNA-dihydrouridine synthase n=2 Tax=Deltaproteobacteria RepID=Q2LR94_SYNAS Length = 326 Score = 68.3 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 22/160 (13%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 K++ GA + L DP L++++ + A V +G Sbjct: 103 VKKVVKNGA-----GAALLKDPGLVSQILESV------------RKATRKPLTVKIRSGW 145 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 ++ + + +++G + ++ G D +++++ + +I + Sbjct: 146 NLQS----INAVQIARIAEQQGIDAVFVHARTAVQGFAGSADWRIIEEIKNSVGIKVIGN 201 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 G + + DG + E Y Sbjct: 202 GDVKSGADAWRMIKMTGCDGVMIGRGALGNPWIFNEALNY 241 Score = 65.6 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 3/103 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIP 76 VK N + I + V +A+ ++G D + + TA D + + + I Sbjct: 139 VKIRSGWNLQSI-NAVQIARIAEQQGIDAVFVHARTAVQGFAGSADWRIIEEIKNSVGIK 197 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 G +KS DA +++ G D + I AL +P + + Sbjct: 198 VIGNGDVKSGADAWRMIKMTGCDGVMIGRGALGNPWIFNEALN 240 >UniRef50_UPI0000D52F94 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52F94 Length = 338 Score = 68.3 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 54/180 (30%), Gaps = 7/180 (3%) Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF--GVQCIVV 127 E IP G I + +L +D I IN A +V Sbjct: 65 REKPFIPQIFGGDISEMAKTVGMLEDRSDVIDINFGCPAPKVCRNDAGAALLRDPDKVVS 124 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + ++ V G S L+ + + G I ++ +G Sbjct: 125 MVRRCIESTNVPITVKMRLGTGSGPN----TALEISKRLADEGVMRICVHGRTLRQRYSG 180 Query: 188 Y-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 D +Q+K++ +P+IA+G + + G + + E+K Sbjct: 181 IADWDQIKEISNSVDIPVIANGDVVDTKSAELCLEATNAGGLMIGRGAIGRPTIFHEIKH 240 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 10/184 (5%) Query: 33 VPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + ++KR A+EG + + T + D + ++ +DIP G + + A Sbjct: 153 LEISKRLADEGVMRICVHGRTLRQRYSGIADWDQIKEISNSVDIPVIANGDVVDTKSAEL 212 Query: 92 ILSF-GADKISINSPALADPTLITRLADRFGVQCIVV------GIDTWYDAETGKYHVNQ 144 L A + I A+ PT+ + G ++Q Sbjct: 213 CLEATNAGGLMIGRGAIGRPTIFHEIKHGMGWSHKTAPWGKGGPSRARSWCWDRYLELSQ 272 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 +S ++ + + + + ++ A + L+ + QD + G ++ E + Sbjct: 273 EVYGDSGSKNLKRHAISFTKGLEGASAMRVRLHSI-QDKTQLGTEVSNYLHDLEETENQV 331 Query: 205 -IAS 207 IAS Sbjct: 332 EIAS 335 >UniRef50_C2KYD0 Dihydrouridine synthase n=4 Tax=Bacteria RepID=C2KYD0_9FIRM Length = 344 Score = 68.3 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 34/108 (31%), Gaps = 1/108 (0%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 +++ + + G + ++ ++ G + + +K+ +E +P+ Sbjct: 166 VKFRIGFTDDAINVVEFAKMAEASGVASVTIHGRTREQYYRGKANWQYIKEAKEAVKIPV 225 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +G E L VDG A I + L+ Sbjct: 226 FGNGDIFQEEDALAMLLSTGVDGVALARGIQGNPFLIRACVSLLSEGK 273 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 2/90 (2%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 ++V AK G + + T R + ++ E + IP G I EDA Sbjct: 178 NVVEFAKMAEASGVASVTIHGRTREQYYRGKANWQYIKEAKEAVKIPVFGNGDIFQEEDA 237 Query: 90 AK-ILSFGADKISINSPALADPTLITRLAD 118 +LS G D +++ +P LI Sbjct: 238 LAMLLSTGVDGVALARGIQGNPFLIRACVS 267 >UniRef50_C0QKE4 Dhs2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKE4_DESAH Length = 330 Score = 68.3 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 1/122 (0%) Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YD 189 A + S + + D + + G I ++ G D Sbjct: 124 AIIRAVRRAVSMPFTIKIRSGWDSSASQAFDIARMAEDNGVDAIAIHPRTAAQGFRGRAD 183 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + +++E+ +P+I +G T E + ++ DG + G ++A L Sbjct: 184 WSMIARLKEMLTIPVIGNGDITTPEQGVAMIQETGCDGVMVGRAAMGNPFIFGGIEALLR 243 Query: 250 TQ 251 + Sbjct: 244 GE 245 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 +K + +A+ + G D + + TA+ R D S ++R+ E++ IP Sbjct: 139 IKIRSGWDSS-ASQAFDIARMAEDNGVDAIAIHPRTAAQGFRGRADWSMIARLKEMLTIP 197 Query: 77 FCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRL 116 G I + E A I G D + + A+ +P + + Sbjct: 198 VIGNGDITTPEQGVAMIQETGCDGVMVGRAAMGNPFIFGGI 238 >UniRef50_Q72EB7 Dihydrouridine synthase family protein n=4 Tax=Desulfovibrio RepID=Q72EB7_DESVH Length = 332 Score = 68.3 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 10/180 (5%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDI 75 +VK + + G V LA+R+ + GAD LVF+ A R + + V E + I Sbjct: 139 LVKFRTGWSPDPQG-AVALARRFEDAGADALVFHPRVAPDRRTRPPLRHHIRLVKEAVAI 197 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P G + + DAA +L G D IS+ AL P + +V + + Sbjct: 198 PVLGNGEVFTPGDAASMLETTGCDGISLGRIALGRPWVFAAW-------TGLVDDNPASN 250 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + + R + ++ + + G D L+ Sbjct: 251 PDLWRDIPLALLDALERRHADRKYAARLFKKFLLYFIANFTYGNSLRGPMLKGDDPADLR 310 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 48/162 (29%), Gaps = 11/162 (6%) Query: 86 LEDAAKILSFGADKISINS----PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 E A ++ + G + IN A+ L + V +++ A Sbjct: 82 AEAARRVEAEGFFGVDINMGCSVAAIVRRGCGADLLR--DEERAVRMVESVRRAVDCPVL 139 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVC 200 V TG + + + + GA +V + R L ++ V+E Sbjct: 140 VKFRTGWSPDPQG----AVALARRFEDAGADALVFHPRVAPDRRTRPPLRHHIRLVKEAV 195 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +P++ +G T DG + + Sbjct: 196 AIPVLGNGEVFTPGDAASMLETTGCDGISLGRIALGRPWVFA 237 >UniRef50_B0VH62 Dihydrouridine synthase family protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH62_9BACT Length = 321 Score = 68.3 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 59/169 (34%), Gaps = 20/169 (11%) Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I K++ GA S + P+L ++ +A G+ Sbjct: 94 DINMGCPVKKVIRKGA-----GSALMQTPSLAGKIVKEV------------KNALLGRIP 136 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVC 200 ++ S L + +Q+ GA + L+ + +G + EQ+K +++ Sbjct: 137 LS--VKFRSGWNFQNQNYLQFGLMLQECGADFLCLHPRTSSQMFSGTSNWEQIKILKQNV 194 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +P++ +G T E + + DG + + + + ++ Sbjct: 195 QIPVVGNGDIKTPEDAQRMITETNCDGIMIGRGALGKPWLFAQSRQLIS 243 Score = 67.6 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 3/100 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK N + + + E GAD L + T+S + + + + + IP Sbjct: 139 VKFRSGWNFQ-NQNYLQFGLMLQECGADFLCLHPRTSSQMFSGTSNWEQIKILKQNVQIP 197 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITR 115 G IK+ EDA +++ D I I AL P L + Sbjct: 198 VVGNGDIKTPEDAQRMITETNCDGIMIGRGALGKPWLFAQ 237 >UniRef50_A9BIR6 Dihydrouridine synthase DuS n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIR6_PETMO Length = 301 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 7/109 (6%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVS 67 +D+ G V+ +I +A+ + GAD ++ + T S + ++ + Sbjct: 123 SIDLPVGVKVRL-----GYDQINIEEVAETVEKAGADYIIVHGRTRSQMYSGIANREILK 177 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITR 115 ++ I IP +G + S +D L++GAD + + A+ +P + T+ Sbjct: 178 KLKAKITIPLGASGDVFSKKDIDDYLLNYGADFVLVARGAIGNPWIFTK 226 Score = 67.6 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKK 195 K ++ G + R Q + + V+K GA I+++ + + +G + E LKK Sbjct: 119 NLKKSIDLPVGVKVRLGYDQINIEEVAETVEKAGADYIIVHGRTRSQMYSGIANREILKK 178 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ +PL ASG + + + + D L A Sbjct: 179 LKAKITIPLGASGDVFSKKDIDDYLLNYGADFVLVAR 215 >UniRef50_A4HAN2 Putative uncharacterized protein n=3 Tax=Leishmania RepID=A4HAN2_LEIBR Length = 512 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDI 75 V V+ R + + + V A++ GA L + +A+S V V + E + + Sbjct: 265 CV--VKMRIKDDLRNSVDFARQCEAAGASWLTVHGRSATSQPSAAVQFEAVKLIRENLSV 322 Query: 76 PFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADR 119 P + GG++ + A L G + + L +P + A R Sbjct: 323 PVVLNGGVRDVSTAMEAALRTGCGGLMSANGLLDNPAMFYSGASR 367 Score = 49.9 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 46/145 (31%), Gaps = 8/145 (5%) Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK-------YHVNQYTGDESRTRV 154 I + L P + + + G + R + Sbjct: 214 IGAVLLDQPERVADMVRSIRNAMPDGNTAPMMVSIGGACSSCPATAPPFLPCVVKMRIKD 273 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 ++D+ ++ + GA + ++ + E +K +RE VP++ +GG + Sbjct: 274 DLRNSVDFARQCEAAGASWLTVHGRSATSQPSAAVQFEAVKLIRENLSVPVVLNGGVRDV 333 Query: 214 EHFLEAFRDADVDGALAASVFHKQI 238 +EA G ++A+ Sbjct: 334 STAMEAALRTGCGGLMSANGLLDNP 358 >UniRef50_Q6C4K2 YALI0E26059p n=1 Tax=Yarrowia lipolytica RepID=Q6C4K2_YARLI Length = 359 Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 24/182 (13%) Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G + V V + P+ GI + + G + + + P L+ + Sbjct: 106 GGNNAEDMVKAVK--MLQPYVDGVGINCGCPIKEQIREG-----VGAALMTAPDLVAEMV 158 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 +C Y + R +T+ + + V+ GA I ++ Sbjct: 159 AAIRKECGA----------------EIYVEVKMRIHKDLNDTVHFAKLVEAAGADSISVH 202 Query: 178 MMNQDG-VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 R + + +K V++ VP+IA+G A T + E DG +AA Sbjct: 203 GRLVPQRSRTAPNYDGIKIVKDSVDVPVIANGDAFTTTNIEEIVELTGCDGVMAARGILS 262 Query: 237 QI 238 Sbjct: 263 NP 264 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 2/96 (2%) Query: 21 VQFRNHEIIGDIVPLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIPFCV 79 V+ R H+ + D V AK GAD + + + + + V + +D+P Sbjct: 173 VKMRIHKDLNDTVHFAKLVEAAGADSISVHGRLVPQRSRTAPNYDGIKIVKDSVDVPVIA 232 Query: 80 AGGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 G + + +I+ G D + L++P + Sbjct: 233 NGDAFTTTNIEEIVELTGCDGVMAARGILSNPAMFA 268 >UniRef50_B2ULM0 TIM-barrel protein, nifR3 family n=3 Tax=Verrucomicrobia RepID=B2ULM0_AKKM8 Length = 334 Score = 67.6 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 66/219 (30%), Gaps = 14/219 (6%) Query: 40 AEEGADELV--FYDITASSDGRVVDKSW--VSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 E G D +V F ++ + + I I A G E A IL Sbjct: 37 KELGVDVMVTEFVSAEGILQAWERNRRYTKIENAHRPIGIQLFGADGNHMGEAARIILDH 96 Query: 96 GADKISINSPALADPTLITR-----LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + P ++ + L + V G E G + Sbjct: 97 EKPDFIDINFGCPVPKVVGKNGGSSLLKDLPLLASVAGGVVKAVGERIPVTAKIRIGWDF 156 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGG 209 ++ +D + ++ G I ++ + +G + + + + VP+I +G Sbjct: 157 QS----LCAMDACRLLENEGISMITIHGRTRSQQYSGTANWDIIDECARAMSVPVIGNGD 212 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 T + + V G + + G+ K YL Sbjct: 213 ISTPQAVAYVKENTAVSGVMIGRAAMENPWIFGDAKYYL 251 >UniRef50_Q30WR3 Dihydrouridine synthase family protein n=3 Tax=Deltaproteobacteria RepID=Q30WR3_DESDG Length = 376 Score = 67.6 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 9/108 (8%) Query: 18 VKGVQFRNHEIIGDI---VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVI 73 VK + D V LA+R + GAD LVF+ A + + V + + Sbjct: 187 VKMRTGWSP----DPEPAVNLARRLQDAGADALVFHPRVAPDRRTHRPRTAHIGLVKDAV 242 Query: 74 DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRF 120 DIP G + D A +L G D +S+ A+A P + + F Sbjct: 243 DIPVIGNGDVFDAADCAAMLERTGCDGVSLGRLAIARPWIFAQWTRGF 290 Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 1/101 (0%) Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN-MMNQDGVRNGYDLE 191 DA V + + ++ + +Q GA +V + + D + Sbjct: 174 VDAVRRAVSVPVFVKMRTGWSPDPEPAVNLARRLQDAGADALVFHPRVAPDRRTHRPRTA 233 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + V++ +P+I +G DG Sbjct: 234 HIGLVKDAVDIPVIGNGDVFDAADCAAMLERTGCDGVSLGR 274 >UniRef50_D0LJX3 TIM-barrel protein, nifR3 family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJX3_HALO1 Length = 348 Score = 67.6 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 51/172 (29%), Gaps = 5/172 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 ++ A L GA I IN A + + + V Sbjct: 86 VQAAQLALDIGASLIDINMGCPAKRVVAGECGAALMQWPELSAELVRAVVASVPDSVPVT 145 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC--HV 202 + ++ + + GA + ++ + G DLE +++VRE V Sbjct: 146 VKHRAGWNPLNRNAPEFACAMVEAGAQMVTVHGRTRTQGFAGSVDLEVIRRVREAVPARV 205 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 P++ +G ++ +L D + L + G+ Sbjct: 206 PVVGNGDVVCVDDYLRMREHTGCDAVMIGRGALGNPWLFRSL--HALAHGLP 255 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 5/103 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVID-- 74 VK N A E GA + + T + VD + RV E + Sbjct: 146 VKHRAGWNPLNRNAP-EFACAMVEAGAQMVTVHGRTRTQGFAGSVDLEVIRRVREAVPAR 204 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 +P G + ++D ++ G D + I AL +P L L Sbjct: 205 VPVVGNGDVVCVDDYLRMREHTGCDAVMIGRGALGNPWLFRSL 247 >UniRef50_Q54XQ6 tRNA-dihydrouridine synthase 1-like protein n=1 Tax=Dictyostelium discoideum RepID=Q54XQ6_DICDI Length = 435 Score = 67.2 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 4/89 (4%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVV---DKSWVSRVAEVIDIPFCVAGGIKS 85 + D + LA + E G L + T G + + + E + IP G + Sbjct: 187 LDDTIKLALQLQEAGCQLLTIHGRTKEQKGHNSGIANWKAIRTIREQLSIPVIANGSVVQ 246 Query: 86 LEDAAKIL-SFGADKISINSPALADPTLI 113 ED + L GAD + LA+P+ Sbjct: 247 YEDIDRCLEETGADGVMSAEGILANPSFF 275 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 55/160 (34%), Gaps = 7/160 (4%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AAK + D I +N + ++ + K + Sbjct: 124 AAKYIEDHCDAIDLNLGCPQQIARRGNYGSFLLDKPHIILPIVQELHKHIKVPIF----C 179 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNGY-DLEQLKKVREVCHVPLI 205 + R +T+ ++Q+ G + ++ ++ G +G + + ++ +RE +P+I Sbjct: 180 KIRLLPNLDDTIKLALQLQEAGCQLLTIHGRTKEQKGHNSGIANWKAIRTIREQLSIPVI 239 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 A+G E + DG ++A LK Sbjct: 240 ANGSVVQYEDIDRCLEETGADGVMSAEGILANPSFFSGLK 279 >UniRef50_C7PIH0 TIM-barrel protein, nifR3 family n=7 Tax=Bacteroidetes RepID=C7PIH0_CHIPD Length = 354 Score = 66.8 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 7/129 (5%) Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 +V A V G + T+ + + +Q G + ++ + Sbjct: 122 KMVKLTAAVVKATKLPVTVKTRLGWDDDTK----NIEEVAERLQDVGIQALTIHGRTRTQ 177 Query: 184 VRNG-YDLEQLKKVREVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + G D + KV+ H+P+ +G T E + A VDG + Sbjct: 178 MYKGHADWTLIGKVKNNPRIHIPIFGNGDICTPEQAIAAREKYGVDGVMIGRAAIGYPWI 237 Query: 241 IGELKAYLA 249 E+K ++ Sbjct: 238 FNEIKHFMQ 246 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 5/138 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEV--ID 74 VK + +I +A+R + G L + T + + D + + +V I Sbjct: 140 VKTRLGWDD-DTKNIEEVAERLQDVGIQALTIHGRTRTQMYKGHADWTLIGKVKNNPRIH 198 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G I + E A +G D + I A+ P + + + Sbjct: 199 IPIFGNGDICTPEQAIAAREKYGVDGVMIGRAAIGYPWIFNEIKHFMQTGEHLPPPSVLE 258 Query: 134 DAETGKYHVNQYTGDESR 151 E K H+ + Sbjct: 259 RVEVCKKHLQHSVQWKGD 276 >UniRef50_Q9FH91 Gb|AAF51525.1 n=7 Tax=Viridiplantae RepID=Q9FH91_ARATH Length = 423 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 7/157 (4%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 +L +AAK + D + IN L P I R +G + E ++N Sbjct: 156 TLLEAAKRVEPYCDYVDIN---LGCPQRIAR-RGNYGAFLMDNLPLVKSLVEKLAQNLNV 211 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD---GVRNGYDLEQLKKVREVCH 201 + R +TL + + ++ G + ++ +D G + D +K+V+ Sbjct: 212 PVSCKIRIFPNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWSAIKEVKNAMR 271 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +P++A+G +E ++ V+G L+A + Sbjct: 272 IPVLANGNVRCIEDVDNCIKETGVEGVLSAETLLENP 308 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 4/90 (4%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITA-SSDGRV--VDKSWVSRVAEVIDIPFCVAGGIKS 85 + D + AK + G L + T DG+ D S + V + IP G ++ Sbjct: 223 LEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWSAIKEVKNAMRIPVLANGNVRC 282 Query: 86 LEDAAKIL-SFGADKISINSPALADPTLIT 114 +ED + G + + L +P Sbjct: 283 IEDVDNCIKETGVEGVLSAETLLENPAAFA 312 >UniRef50_A3VWV8 TRNA-dihydrouridine synthase, putative n=4 Tax=Rhodobacterales RepID=A3VWV8_9RHOB Length = 339 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 37/117 (31%), Gaps = 1/117 (0%) Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLE 191 +A G V + + + G I ++ + G D Sbjct: 130 IEAVVGAVDVPVTLKTRLGWDEGCSNAAELAKRAEAAGVAMITVHGRTRCQFYRGAADWA 189 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + + + ++P+IA+G + A ++ G + + + E+ A + Sbjct: 190 MISDIAQAVNIPVIANGDIVGVASACRAMAQSNAAGVMIGRGARGRPWLLAEVAAAM 246 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 2/97 (2%) Query: 30 GDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 + LAKR G + + T D + +S +A+ ++IP G I + Sbjct: 154 SNAAELAKRAEAAGVAMITVHGRTRCQFYRGAADWAMISDIAQAVNIPVIANGDIVGVAS 213 Query: 89 A-AKILSFGADKISINSPALADPTLITRLADRFGVQC 124 A + A + I A P L+ +A G Sbjct: 214 ACRAMAQSNAAGVMIGRGARGRPWLLAEVAAAMGHGT 250 >UniRef50_B6YQB2 tRNA-dihydrouridine synthase n=36 Tax=Bacteria RepID=B6YQB2_AZOPC Length = 340 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 64/219 (29%), Gaps = 15/219 (6%) Query: 43 GADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGAD 98 GAD + F A + + + I + G K +E A D Sbjct: 41 GADMVYTEFISADALIRHVDKIQGKLKIINSEHPIAVQIYGQDKDTMVEAARICEEMQPD 100 Query: 99 KISINSPALADPTLITRLADR---FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 + +N + ++ R G+ + + ++ Sbjct: 101 FLDLNFGCP-----VKKIVRRNAGAGMLRVPKKMIEITQQVVHSVNIPITVKTRLGWDEN 155 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH--VPLIASGGAGT 212 +D + +Q G + ++ + +G D + V+ +P+ +G + Sbjct: 156 SKIIVDLAERLQDTGIALLTIHGRTGSQMYSGKADWNLIGAVKNNPRMYIPICGNGDIVS 215 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + +AF VD + E+K YL Sbjct: 216 PQQCEQAFNRYGVDAVMIGRASIGAPWIFQEVKYYLKYN 254 >UniRef50_Q09504 Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2 n=2 Tax=Chromadorea RepID=YQI2_CAEEL Length = 284 Score = 66.8 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 15/137 (10%) Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 S L+ P L+ + T + V+ T +D Sbjct: 93 FGSALLSKPELLADMVR-----------QTRARIPDPDFSVSLKIRINHDIEKT----VD 137 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 ++ + G + ++ D++ L+ V++ VP+IA+GG T E L Sbjct: 138 LCRKAEAAGVTHLTVHGRTPSQRAEPIDIQALRIVKDSVSVPIIANGGITTREEALFLAE 197 Query: 222 DADVDGALAASVFHKQI 238 VDG +AA+ Sbjct: 198 QTGVDGIMAANGLLDNP 214 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 I V L ++ G L + T S +D + V + + +P GGI + E Sbjct: 131 DIEKTVDLCRKAEAAGVTHLTVHGRTPSQRAEPIDIQALRIVKDSVSVPIIANGGITTRE 190 Query: 88 DAAKILS-FGADKISINSPALADPTLIT 114 +A + G D I + L +P L Sbjct: 191 EALFLAEQTGVDGIMAANGLLDNPALFA 218 >UniRef50_B8DIS9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibrionales RepID=B8DIS9_DESVM Length = 383 Score = 66.4 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 11/113 (9%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDI---VPLAKRYAEEGADELVFYDITAS-SDGRVVDKS 64 +D+ VK + D V LA+R+ + GAD LVF+ A + ++ Sbjct: 170 AVDIP--VFVKFRTGWSP----DPQPAVDLARRFEDAGADCLVFHPRVAPDRRTQPPRRA 223 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 + V + IP G + + ED A +L G D +S+ A+A P + Sbjct: 224 HIGLVKAAVSIPVMGNGDVFTPEDCANLLDDTGCDGVSLGRIAVARPWVFAAW 276 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 42/147 (28%), Gaps = 22/147 (14%) Query: 93 LSFGADKISI-----NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 L+ G +I + L DP R+ A V TG Sbjct: 135 LNMGCSVSAIIKRGCGADLLRDPERAVRMVAAV------------RRAVDIPVFVKFRTG 182 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLN-MMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 + +D + + GA +V + + D + V+ +P++ Sbjct: 183 WSPDPQP----AVDLARRFEDAGADCLVFHPRVAPDRRTQPPRRAHIGLVKAAVSIPVMG 238 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASV 233 +G T E D DG + Sbjct: 239 NGDVFTPEDCANLLDDTGCDGVSLGRI 265 >UniRef50_A6BZR9 Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZR9_9PLAN Length = 355 Score = 66.4 bits (161), Expect = 9e-10, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 55/187 (29%), Gaps = 12/187 (6%) Query: 74 DIPFCVAGGIK-SLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + + GGI L AA+ L G + +N + ++ G I+ D Sbjct: 80 PLTIQIFGGITAELVAAARWLEQHGYAAVDLNMGCP-----MAKINGNGGGARIMCAPDA 134 Query: 132 WYDAETG---KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 + +E ++ G I ++ ++ G Sbjct: 135 ACQLVAEVVDAVSIPVTVKMRLGWDRDSITAPLLAREFEQAGVAAITVHGRTRNQGFGGT 194 Query: 188 YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 DL+ +++ E +P+I +G T+E + ++ Sbjct: 195 VDLQGIRQTVEAVQQIPVIGNGDVCTVEDAFRMREQTGCEAVSIGRGAMLDPWIFRKISQ 254 Query: 247 YLATQGV 253 + + V Sbjct: 255 AVRDEPV 261 Score = 63.0 bits (152), Expect = 9e-09, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 49/111 (44%), Gaps = 4/111 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVID-I 75 VK + + I + LA+ + + G + + T + G VD + + E + I Sbjct: 152 VKMRLGWDRDSITAPL-LAREFEQAGVAAITVHGRTRNQGFGGTVDLQGIRQTVEAVQQI 210 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 P G + ++EDA ++ G + +SI A+ DP + +++ + + Sbjct: 211 PVIGNGDVCTVEDAFRMREQTGCEAVSIGRGAMLDPWIFRKISQAVRDEPV 261 >UniRef50_D1U4K9 Dihydrouridine synthase DuS n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4K9_9DELT Length = 339 Score = 66.4 bits (161), Expect = 9e-10, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 64/193 (33%), Gaps = 29/193 (15%) Query: 60 VVDKSWVSRVAEV---IDIPFC---VAGGIKSLE-----DAAKILSFGADKISINSPALA 108 D V ++ + P V G ++ + K+L G+ + Sbjct: 61 PEDDPMVLQLFGADPDLFGPVMDWLVDLGYRNFDLNAGCPVRKVLKSGS-----GVKLME 115 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 DP + R+A V+ A G+ V G + L+ + ++ Sbjct: 116 DPDTLVRIAS-------VMVERATAHARGGQVGVKFRLGFDKGND----TYLELARRLED 164 Query: 169 RGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 G + L+ + G D +L ++ +P++ASG T E + + VD Sbjct: 165 AGVHWVTLHPRYGRQMFAGQADWSKLGLLKRAVSIPVVASGDLFTAEDGVRCVEETGVDA 224 Query: 228 ALAAS-VFHKQII 239 + A + I Sbjct: 225 VMFARGALYDPAI 237 Score = 56.8 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 6/107 (5%) Query: 13 RDGQVVKGVQFRNHEIIGD--IVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRV 69 R GQV GV+FR G+ + LA+R + G + + D S + + Sbjct: 136 RGGQV--GVKFRLGFDKGNDTYLELARRLEDAGVHWVTLHPRYGRQMFAGQADWSKLGLL 193 Query: 70 AEVIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITR 115 + IP +G + + ED + G D + AL DP + R Sbjct: 194 KRAVSIPVVASGDLFTAEDGVRCVEETGVDAVMFARGALYDPAIFDR 240 >UniRef50_B8GCQ5 TIM-barrel protein, nifR3 family n=6 Tax=Chloroflexi (class) RepID=B8GCQ5_CHLAD Length = 351 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 1/112 (0%) Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 A + + ++ Q + G + L+ ++ G D + Sbjct: 143 RAVRAAVQIPVTLKLRAGWDEASLNFIEAGQRAEAAGVAALTLHPRTREQGYKGQADWSR 202 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + ++ +P+I SG T + L RD+ DG + ++ Sbjct: 203 VAALKRAVSIPVIGSGDVVTAQDALIRLRDSGADGVMIGRGAIANPWIFRQV 254 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + + + +R G L + T + D S V+ + + IP Sbjct: 156 KLRAGWDEASL-NFIEAGQRAEAAGVAALTLHPRTREQGYKGQADWSRVAALKRAVSIPV 214 Query: 78 CVAGGIKSLEDAA-KILSFGADKISINSPALADPTLITRLAD 118 +G + + +DA ++ GAD + I A+A+P + ++AD Sbjct: 215 IGSGDVVTAQDALIRLRDSGADGVMIGRGAIANPWIFRQVAD 256 >UniRef50_D1R8P9 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8P9_9CHLA Length = 342 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 52/172 (30%), Gaps = 4/172 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + A I G D + +N D +T+ G+ + I + Sbjct: 86 AKAAKIIEDLGFDVVDLNCGCPVDK--VTKDGSGSGLLKNPLLIGEILSEMVAAVKIPVT 143 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVRE-VCHVP 203 + + Q +K GA I ++ + G + + +K ++ H+ Sbjct: 144 VKIRAGWDDENLCAEEITQIAEKAGAKAITIHGRTRQQAYRGPANWDHIKASKQVAKHIK 203 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +I +G F D L A Q ++ YL + + Sbjct: 204 VIGNGDVMDPTSAKRMFEYTGCDAVLVARGTMGQPWIAQDILNYLQGGTIRV 255 >UniRef50_Q2RM54 Dihydrouridine synthase TIM-barrel protein nifR3 n=6 Tax=Clostridia RepID=Q2RM54_MOOTA Length = 334 Score = 65.6 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 37/115 (32%), Gaps = 1/115 (0%) Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV 199 V ++ + V GA + ++ + +G D ++V+E Sbjct: 138 PVPVTVKMRLGWDEDSINVVEAARAVVYAGAAAVAIHGRTRSQFYSGRADWSYFRRVKEA 197 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 VP+I +G T + + DG + + ++A L + Sbjct: 198 VDVPVIGNGDVRTARDAVTMLAETGCDGVMVGRGAVGNPWLLTAIRAVLEGRPEP 252 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 3/117 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + ++V A+ GA + + T S D S+ RV E +D+P Sbjct: 143 VKMRLGWDE-DSINVVEAARAVVYAGAAAVAIHGRTRSQFYSGRADWSYFRRVKEAVDVP 201 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 G +++ DA +L G D + + A+ +P L+T + + +D Sbjct: 202 VIGNGDVRTARDAVTMLAETGCDGVMVGRGAVGNPWLLTAIRAVLEGRPEPPPVDVR 258 >UniRef50_D0L1E3 TIM-barrel protein, nifR3 family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1E3_HALNC Length = 333 Score = 65.6 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 9/173 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT---WYDAETGKYHV 142 E A +S GA I +N A ++ R ++ DT +A Sbjct: 94 AEAARFAVSQGAQLIDLNLGCPA-----KKVCKRAAGSALMAEPDTVARLLEALVAAVDC 148 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + + + + G + ++ + G + + + +V Sbjct: 149 PVSLKMRTGPDREWRNAVAIAKIAENAGISMLSIHGRTRADRYEGEAEYDTIAEVVAAVD 208 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +P+ A+G T + + G + Q LKA L Q + Sbjct: 209 LPVFANGDITTPQKARQVIAHTGAAGIMVGRGAFGQPWIFSALKAELTGQPLP 261 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 2/102 (1%) Query: 31 DIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + V +AK G L + T + + ++ V +D+P G I + + A Sbjct: 164 NAVAIAKIAENAGISMLSIHGRTRADRYEGEAEYDTIAEVVAAVDLPVFANGDITTPQKA 223 Query: 90 AKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 ++++ GA I + A P + + L Q + D Sbjct: 224 RQVIAHTGAAGIMVGRGAFGQPWIFSALKAELTGQPLPSPPD 265 >UniRef50_A6CBK4 Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 family protein n=2 Tax=Planctomycetaceae RepID=A6CBK4_9PLAN Length = 365 Score = 65.6 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 11/168 (6%) Query: 86 LEDAAKILSF-GADKISINSPALADPTLITRLADR-FGVQCIVVGIDT--WYDAETGKYH 141 ++DAA++L G I IN + R+ G + DT Sbjct: 98 MKDAAQLLESRGVHSIDINMGCPVN-----RIVKGGAGASMMCRPSDTVSLVQTVVEAVK 152 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVC 200 + ++ + +E +K G + ++ ++ G + + +++V E Sbjct: 153 IPVSVKMRLGWDDSELSAPFFSREFEKVGVVAVAIHGRTREQGFRGVVNHDGIRRVVEAV 212 Query: 201 H-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +P+I +G + + G +L + Sbjct: 213 DSIPVIGNGDVTNVAEADFMLKTTGCAGVSIGRGALANPWIFRQLVQW 260 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVID-I 75 VK + + ++ + + G + + T R V + + RV E +D I Sbjct: 157 VKMRLGWDDSELSAPF-FSREFEKVGVVAVAIHGRTREQGFRGVVNHDGIRRVVEAVDSI 215 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADR 119 P G + ++ +A +L G +SI ALA+P + +L Sbjct: 216 PVIGNGDVTNVAEADFMLKTTGCAGVSIGRGALANPWIFRQLVQW 260 >UniRef50_Q12ZA4 Putative uncharacterized protein n=5 Tax=Euryarchaeota RepID=Q12ZA4_METBU Length = 429 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 5/107 (4%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE 71 +++ VV V+ R + + D + LA+ GAD L A +G D + R+ + Sbjct: 201 IKETGVVLSVKVRANVV--DDIALARSIENAGADILHV---DAMKEGAGADLRAILRIRD 255 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + I + DA + S GAD IS++ L D I L + Sbjct: 256 STRLLLIGNNSIMDIMDARDMFSKGADMISVSRVVLEDDGFIDSLVE 302 >UniRef50_D2U2K4 tRNA-dihydrouridine synthase B n=1 Tax=Arsenophonus nasoniae RepID=D2U2K4_9ENTR Length = 458 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 46/154 (29%), Gaps = 17/154 (11%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 ++ S L P LI ++ A V + + Sbjct: 134 VNRKLAGSALLRYPELIEKIL----------------LAVVNAVDVPVTLKVRTGWSPEE 177 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEH 215 + Q ++ G + ++ + + NG + + ++ ++ +P+IA+G Sbjct: 178 RNCIKIAQLAERCGIQAVTIHGRTRACLFNGAAEYDSIRAAKQNVTIPIIANGDITDPLK 237 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 D + + E++ YL Sbjct: 238 ARAVLDYTGADALMIGRAAQGRPWIFREIQHYLE 271 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 2/86 (2%) Query: 33 VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + +A+ G + + T + + + + + IP G I A Sbjct: 181 IKIAQLAERCGIQAVTIHGRTRACLFNGAAEYDSIRAAKQNVTIPIIANGDITDPLKARA 240 Query: 92 ILS-FGADKISINSPALADPTLITRL 116 +L GAD + I A P + + Sbjct: 241 VLDYTGADALMIGRAAQGRPWIFREI 266 >UniRef50_A6DCX2 tRNA-dihydrouridine synthase B n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCX2_9PROT Length = 311 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 55/183 (30%), Gaps = 22/183 (12%) Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 + V + +IP+ I K G + + + + + Sbjct: 80 AIKAVEIINEIPWIDGIDINLGCPVNKARRSGYGGVLLK---DENKEKLKEIVSAI---- 132 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + + R + +D + ++ G + ++ + Sbjct: 133 --------------IKTSKKIVSAKMRLGYNEVVAVDRAKMLEDLGIKFLTVHGRTVKQM 178 Query: 185 RNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 G + +++KKV + ++P+IA+G + E + +G + E Sbjct: 179 YKGNANYKEIKKVVKEVNIPVIANGDITDYKKAKEVLEYTEANGVAIGRGVIGKPWIFLE 238 Query: 244 LKA 246 +K Sbjct: 239 MKQ 241 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 7/119 (5%) Query: 4 KRIIPCLDVRDGQVV--KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 K I+ + ++V K N + V AK + G L + T + Sbjct: 126 KEIVSAIIKTSKKIVSAKMRLGYNEVVA---VDRAKMLEDLGIKFLTVHGRTVKQMYKGN 182 Query: 62 -DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 + + +V + ++IP G I + A ++L A+ ++I + P + + Sbjct: 183 ANYKEIKKVVKEVNIPVIANGDITDYKKAKEVLEYTEANGVAIGRGVIGKPWIFLEMKQ 241 >UniRef50_Q6AKJ6 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKJ6_DESPS Length = 354 Score = 64.9 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 3/102 (2%) Query: 33 VPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + K EG D L + R ++ + E +DIP GGI S++DA + Sbjct: 185 LDFCKMLEAEGVDLLAVHARYHGEKFCRKPRWQLLAPICEQLDIPIFANGGIFSVDDARR 244 Query: 92 ILS-FGADKISINSPALADPTLITRLA-DRFGVQCIVVGIDT 131 L GA + + A+ P L +A + +G+ V Sbjct: 245 CLELSGAAGLMLGRGAVERPWLFNEIAREVYGLDLPVAESRP 286 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 11/110 (10%), Positives = 37/110 (33%), Gaps = 1/110 (0%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPLI 205 + LD+ + ++ G + ++ + + + L + E +P+ Sbjct: 172 KIRVGHVGKEAHLLDFCKMLEAEGVDLLAVHARYHGEKFCRKPRWQLLAPICEQLDIPIF 231 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 A+GG +++ + G + ++ E+ + + + Sbjct: 232 ANGGIFSVDDARRCLELSGAAGLMLGRGAVERPWLFNEIAREVYGLDLPV 281 >UniRef50_Q12U52 tRNA-dihydrouridine synthase n=2 Tax=Archaea RepID=Q12U52_METBU Length = 318 Score = 64.9 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 2/98 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + +A R + G + + T D S+ + E + IP V G I+ A K Sbjct: 151 LDMAHRLEDAGVCAITVHGRTCEQGYSGTADHSYAKLIKEELSIPVIVNGDIRDGVSAEK 210 Query: 92 ILS-FGADKISINSPALADPTLITRLADRFGVQCIVVG 128 +L G D + I A+ DP + R++ ++ Sbjct: 211 VLEYTGCDGLMIGRAAMGDPHVFHRISRYLDDGEVIGC 248 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 1/113 (0%) Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC 200 V+ + R ++ TLD ++ G I ++ + +G D K ++E Sbjct: 133 VDTPVTAKIRVLESRAATLDMAHRLEDAGVCAITVHGRTCEQGYSGTADHSYAKLIKEEL 192 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +P+I +G + DG + + YL V Sbjct: 193 SIPVIVNGDIRDGVSAEKVLEYTGCDGLMIGRAAMGDPHVFHRISRYLDDGEV 245 >UniRef50_B7PPV8 tRNA-dihydrouridine synthase, putative n=1 Tax=Ixodes scapularis RepID=B7PPV8_IXOSC Length = 483 Score = 64.9 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 53/146 (36%), Gaps = 7/146 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 V A+ G L + T G + + V + IP G I+ LEDA Sbjct: 157 VRYAQMLEAAGCQVLTVHGRTREQKGPHTGLASWEHIRAVKRSVKIPVIANGNIQYLEDA 216 Query: 90 AKIL-SFGADKISINSPALADPTLIT-RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 + L GAD + L +P L T RLA + + + D +V + Sbjct: 217 ERCLRETGADAVMSAEGHLHNPYLFTGRLAPVWEASLEYLCL--VRDHPCPASYVRGHLF 274 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGE 173 +T E +D +++ K A E Sbjct: 275 KLMHHCLTMAENVDLREKLAKASALE 300 Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 49/142 (34%), Gaps = 7/142 (4%) Query: 97 ADKISINSPALADPTL-ITRLADRFGVQCIVVGIDTWYDAE-TGKYHVNQYTGD--ESRT 152 A ++ + D L + R G + D A + H + R Sbjct: 90 ASRLVVGHCCAVDLNLGCPQAIARAGHYGAFLQDDWDLLARMVQRVHTQVDVPITCKVRV 149 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPLIASGG 209 +T+ + Q ++ G + ++ ++ E ++ V+ +P+IA+G Sbjct: 150 FPEVEKTVRYAQMLEAAGCQVLTVHGRTREQKGPHTGLASWEHIRAVKRSVKIPVIANGN 209 Query: 210 AGTMEHFLEAFRDADVDGALAA 231 +E R+ D ++A Sbjct: 210 IQYLEDAERCLRETGADAVMSA 231 >UniRef50_Q54ES7 tRNA-dihydrouridine synthase 4-like protein n=1 Tax=Dictyostelium discoideum RepID=Q54ES7_DICDI Length = 344 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 55/164 (33%), Gaps = 2/164 (1%) Query: 76 PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 P V G+ + E+ D P + + FG ++ + Sbjct: 111 PLIVQFGVNNAEELVSAAEKVKDYCQGIDINCGCPQRWV-MKEGFGANLLLHPERIYDMV 169 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLK 194 + V + R + +T++ + ++ G I ++ + D + +K Sbjct: 170 KQINNRVPIPISIKIRVQSDLKDTIELAKRAERIGVSWITVHGRTSAMKSSHPVDYDAIK 229 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 V++ +P+ A+G T+ E V+G ++A Sbjct: 230 LVKDNVTLPVFANGDVFTLSQSNEIREKTGVNGVMSARGLLTNP 273 >UniRef50_C6C170 Dihydrouridine synthase DuS n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C170_DESAD Length = 323 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 54/159 (33%), Gaps = 11/159 (6%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY- 145 + +++ G +NS + ++ G + + D + + V Sbjct: 80 DTMPQLIDEGYSFFDLNSGCP-----VKKVLKTGGGSALHLDPDRLVETASAMVRVAGEG 134 Query: 146 ---TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + L+ + ++ G + ++ + +G D +L +++ Sbjct: 135 KVGVKIRLGFMNGEDNFLEIAKRLEDTGVAWLTMHPRYAKQMFSGQADWSKLAVLKQNVS 194 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAAS-VFHKQII 239 +P+I SG T E +E + +DG + A I Sbjct: 195 IPVIGSGDLFTAEDGMECIKQTGIDGIMFARGALFDPEI 233 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 2/104 (1%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLED 88 + + +AKR + G L + A D S ++ + + + IP +G + + ED Sbjct: 149 DNFLEIAKRLEDTGVAWLTMHPRYAKQMFSGQADWSKLAVLKQNVSIPVIGSGDLFTAED 208 Query: 89 AAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + + G D I AL DP + R Sbjct: 209 GMECIKQTGIDGIMFARGALFDPEIFARYLKLLDDPKCATLPPF 252 >UniRef50_B8P3J2 Predicted protein (Fragment) n=3 Tax=Agaricomycetes RepID=B8P3J2_POSPM Length = 260 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 4/88 (4%) Query: 33 VPLAKRYAEEGADELVFYDIT---ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + LA+R GA + + T D + + + + IP G ++ ED Sbjct: 142 LDLARRLEHAGASWVTLHARTVSVRRRRQGAADLEQIKTLKDNLSIPVISNGNVRVWEDV 201 Query: 90 AKILS-FGADKISINSPALADPTLITRL 116 + L+ GAD I + LA+P L + Sbjct: 202 ERNLALTGADGIMVGESLLANPCLFADI 229 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 3/88 (3%) Query: 160 LDWVQEVQKRGAGEIVLNMMN---QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 LD + ++ GA + L+ + + DLEQ+K +++ +P+I++G E Sbjct: 142 LDLARRLEHAGASWVTLHARTVSVRRRRQGAADLEQIKTLKDNLSIPVISNGNVRVWEDV 201 Query: 217 LEAFRDADVDGALAASVFHKQIINIGEL 244 DG + ++ Sbjct: 202 ERNLALTGADGIMVGESLLANPCLFADI 229 >UniRef50_C1E909 tRNA-dihydrouridine synthase (Fragment) n=2 Tax=Micromonas RepID=C1E909_9CHLO Length = 353 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 4/87 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVV---DKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + AK GA + + T + +++ + + + +P G I++L +A Sbjct: 174 LKYAKMVEAAGAQLIAVHGRTREQKRAADVRANWAFIREIKKQLKVPVLANGDIRTLAEA 233 Query: 90 AKILSF-GADKISINSPALADPTLITR 115 K L GAD + P L +P+L + Sbjct: 234 EKCLEATGADGVLSAEPLLENPSLFSD 260 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 53/167 (31%), Gaps = 26/167 (15%) Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 D+ + DP ++ + A C V I+ K + V Sbjct: 89 DRPLLVQFCANDPDMLLKAASIVAPHCDGVDINFGCPQRIAKRGRYGAFLMDDWETVHNL 148 Query: 158 -----------------------ETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLE 191 +L + + V+ GA I ++ ++ R + Sbjct: 149 INKLDKHLSVPVTAKIRVYDDLETSLKYAKMVEAAGAQLIAVHGRTREQKRAADVRANWA 208 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 ++++++ VP++A+G T+ + DG L+A + Sbjct: 209 FIREIKKQLKVPVLANGDIRTLAEAEKCLEATGADGVLSAEPLLENP 255 >UniRef50_A5FL15 tRNA-dihydrouridine synthase B-like protein n=14 Tax=Bacteroidetes RepID=A5FL15_FLAJ1 Length = 332 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 41/130 (31%), Gaps = 7/130 (5%) Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 +V V G + + + + +Q G + ++ + Sbjct: 123 DLMVRLTKAVIKGTDLPVTVKTRLGWD----ESSINIDEVAERLQDIGVQALTIHARTRA 178 Query: 183 GVRNGY-DLEQLKKVREVCHV--PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + G+ D + +V+ + P+ +G + E L+ + +DG + Sbjct: 179 QMYKGHSDWSHIARVKNNPRITMPIFGNGDIDSPEKALQYKNEYGIDGIMIGRAAIGYPW 238 Query: 240 NIGELKAYLA 249 E+K Y Sbjct: 239 IFNEIKHYFK 248 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 5/137 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEV--ID 74 VK + I +I +A+R + G L + T + + D S ++RV I Sbjct: 142 VKTRLGWDESSI-NIDEVAERLQDIGVQALTIHARTRAQMYKGHSDWSHIARVKNNPRIT 200 Query: 75 IPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 +P G I S E A + +G D I I A+ P + + F + Sbjct: 201 MPIFGNGDIDSPEKALQYKNEYGIDGIMIGRAAIGYPWIFNEIKHYFKTGEHLPAPTVID 260 Query: 134 DAETGKYHVNQYTGDES 150 E + H+ + Sbjct: 261 RVEAARNHLKWSMEWKG 277 >UniRef50_D1AII6 Dihydrouridine synthase DuS n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AII6_SEBTE Length = 309 Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 11/206 (5%) Query: 50 YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 D+ A + + R A + LE ++ G D I IN Sbjct: 33 VDVNALKYSNQRTQDEILRKAGNEAVQIFGNKNEDFLEAVKLLIERGFDHIDINLGCP-- 90 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW----ETLDWVQE 165 + ++ +++ D + + S T + + +V+ Sbjct: 91 ---VKKIIRAGKGSALLLESDFVKELLLKLKKEFRNDIKLSMKIRTGYKNFSDPEYYVKL 147 Query: 166 VQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDA 223 ++ G +I ++ Q+ + +G D +KK++ + +V +I +G ++ E A Sbjct: 148 AEEYGLFQICIHGRTQEQLYSGQADWNIIKKMKQKHKNVKIIGNGDLTDLKTIKEKTDSA 207 Query: 224 DVDGALAASVFHKQIINIGELKAYLA 249 DG + A + E K Y Sbjct: 208 KPDGIMLARGLLGNPWLLKEAKDYFK 233 Score = 41.4 bits (96), Expect = 0.033, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 41/142 (28%), Gaps = 3/142 (2%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEV-IDIPFCVAGG 82 ++ D K E G ++ + T D + + ++ + ++ G Sbjct: 134 GYKNFSDPEYYVKLAEEYGLFQICIHGRTQEQLYSGQADWNIIKKMKQKHKNVKIIGNGD 193 Query: 83 IKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 + L+ K S D I + L +P L+ D F + + Sbjct: 194 LTDLKTIKEKTDSAKPDGIMLARGLLGNPWLLKEAKDYFKTGVFHESEVGREEIKNTLIK 253 Query: 142 VNQYTGDESRTRVTQWETLDWV 163 Y ++ + + Sbjct: 254 HINYCIEDKGEIRANLDMRKHI 275 >UniRef50_C7GZ00 tRNA-dihydrouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ00_9FIRM Length = 336 Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 2/86 (2%) Query: 31 DIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL-ED 88 + V AK GA + + TA V++ ++ V + + IP G IKS E Sbjct: 155 NAVDCAKAIESAGASAVAVHGRTAKQKYEGSVNRDVIASVKQSVSIPVIGNGDIKSAKEA 214 Query: 89 AAKILSFGADKISINSPALADPTLIT 114 + G D + I A+ P + Sbjct: 215 LEFMDETGCDMVMIGRGAIGKPWIFK 240 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 14/124 (11%), Positives = 39/124 (31%), Gaps = 4/124 (3%) Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHV---NQYTGDESRTRVTQWETLDWVQEVQKR 169 + ++ ++ D YD + +D + ++ Sbjct: 107 MQKIVKSGSGAALMKRPDIIYDMVKDAVKITQKPVTAKIRIGWDNNNINAVDCAKAIESA 166 Query: 170 GAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 GA + ++ G + + + V++ +P+I +G + + LE + D Sbjct: 167 GASAVAVHGRTAKQKYEGSVNRDVIASVKQSVSIPVIGNGDIKSAKEALEFMDETGCDMV 226 Query: 229 LAAS 232 + Sbjct: 227 MIGR 230 >UniRef50_A5EVV4 Dihydrouridine synthase n=2 Tax=Cardiobacteriaceae RepID=A5EVV4_DICNV Length = 318 Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 2/84 (2%) Query: 35 LAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 +AK G L + T + + RV +P V G I + A ++ Sbjct: 157 VAKIAENTGVAALTVHGRTRAQRFNGTAHYDEIGRVKAQTSLPIIVNGDITTTAQAQDLI 216 Query: 94 -SFGADKISINSPALADPTLITRL 116 FG D + I A +P L+ + Sbjct: 217 QQFGFDGVMIGRAACGNPWLLAHM 240 Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 47/168 (27%), Gaps = 11/168 (6%) Query: 86 LEDAAKILSFGADKISI----NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 E A + + G D I I + + + L ++ T Sbjct: 83 AETAQVMQALGCDVIDINMGCPAKKVGKQNAGSALLSDLPQVEKILAQVTRV------VS 136 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVC 200 + + + G + ++ + NG +++ +V+ Sbjct: 137 IPVTLKTRLGFNEQTMTIETVAKIAENTGVAALTVHGRTRAQRFNGTAHYDEIGRVKAQT 196 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 +P+I +G T + + DG + + ++ L Sbjct: 197 SLPIIVNGDITTTAQAQDLIQQFGFDGVMIGRAACGNPWLLAHMRCAL 244 >UniRef50_B7PD41 tRNA-dihydrouridine synthase, putative n=1 Tax=Ixodes scapularis RepID=B7PD41_IXOSC Length = 214 Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 15/136 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 + L+DP L+ + V V ++ R +D Sbjct: 6 GAHLLSDPELVRDM---------VHQTRNRLSDPGFTVSVKIRICEDMRKT------VDM 50 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 Q+++ + ++ +D +LE +K V++ +P++A+G ++ +R Sbjct: 51 CQKLEAARVSFVTVHGRTKDQRSEPVNLEAIKNVKDALRIPVVANGDVTSLREADRVYRA 110 Query: 223 ADVDGALAASVFHKQI 238 +G +AA + Sbjct: 111 TGTNGVMAARGLLENP 126 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 35/96 (36%), Gaps = 1/96 (1%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 V+ R E + V + ++ + + T V+ + V + + IP Sbjct: 35 SVKIRICEDMRKTVDMCQKLEAARVSFVTVHGRTKDQRSEPVNLEAIKNVKDALRIPVVA 94 Query: 80 AGGIKSLEDAAKILSF-GADKISINSPALADPTLIT 114 G + SL +A ++ G + + L +P + Sbjct: 95 NGDVTSLREADRVYRATGTNGVMAARGLLENPAMFQ 130 >UniRef50_B0S217 Nitrogen regulation protein n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=B0S217_FINM2 Length = 305 Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 36/118 (30%), Gaps = 2/118 (1%) Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + D + + + Q ++ I L+ + + Sbjct: 116 LAEDVIRACKNNTDLPVSVKFRLGIDENS-MNYMQLAQICERLKVDYITLHARTRKMFYS 174 Query: 187 G-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 G D +K+V E +P+ +G T E + ++ DG L A + + Sbjct: 175 GEADWLHIKRVVENVDIPVFGNGDCFTKEDIRKNMEYSNCDGVLLARGAMQNPFIFSD 232 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 2/83 (2%) Query: 35 LAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA+ D + + T D + RV E +DIP G + ED K + Sbjct: 150 LAQICERLKVDYITLHARTRKMFYSGEADWLHIKRVVENVDIPVFGNGDCFTKEDIRKNM 209 Query: 94 S-FGADKISINSPALADPTLITR 115 D + + A+ +P + + Sbjct: 210 EYSNCDGVLLARGAMQNPFIFSD 232 >UniRef50_Q2C3Y8 Putative oxidoreductase protein n=3 Tax=Gammaproteobacteria RepID=Q2C3Y8_9GAMM Length = 343 Score = 64.1 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 13/124 (10%) Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW---------VQEVQKRGA 171 + V+ ++ + + + T E + Q V+ G Sbjct: 122 PFKPPVLSFHFGLPSQELIERIKSWGTVILSSATTLEEAIWLEKHGADIIIAQGVEAGGH 181 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 + L D +E L ++ VP++A+GG G+ + + + G Sbjct: 182 RAMFLTN---DLNSQMPTVELLLALQSHVSVPIVAAGGIGSKDDIRK-LVELGSSGVQVG 237 Query: 232 SVFH 235 + F Sbjct: 238 TAFL 241 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 10/85 (11%) Query: 33 VPLAKRYAEEGADELVFYD----------ITASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 + A + GAD ++ +T + ++ + + + +P AGG Sbjct: 157 LEEAIWLEKHGADIIIAQGVEAGGHRAMFLTNDLNSQMPTVELLLALQSHVSVPIVAAGG 216 Query: 83 IKSLEDAAKILSFGADKISINSPAL 107 I S +D K++ G+ + + + L Sbjct: 217 IGSKDDIRKLVELGSSGVQVGTAFL 241 >UniRef50_D1AWB1 Dihydrouridine synthase DuS n=12 Tax=Fusobacteriaceae RepID=D1AWB1_STRM9 Length = 305 Score = 64.1 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEH 215 L+ + +K I+++ ++ +G D + +K+V++ ++ +I +G ++ Sbjct: 138 ENYLEIAKIAEKLKCSNIIIHGRTREQKYSGEADWKYIKEVKDNVNIKVIGNGDIFDAKN 197 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKA 246 +E R+ +VDG + A I ++K Sbjct: 198 AIEKIRETNVDGIMLARGILGNPWLISQIKE 228 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 2/95 (2%) Query: 33 VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA-A 90 + +AK + ++ + T D ++ V + ++I G I ++A Sbjct: 141 LEIAKIAEKLKCSNIIIHGRTREQKYSGEADWKYIKEVKDNVNIKVIGNGDIFDAKNAIE 200 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCI 125 KI D I + L +P LI+++ + F I Sbjct: 201 KIRETNVDGIMLARGILGNPWLISQIKELFEFGEI 235 >UniRef50_UPI00016C52C4 dihydrouridine synthase DuS n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C52C4 Length = 326 Score = 64.1 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 52/141 (36%), Gaps = 4/141 (2%) Query: 34 PLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 A AE GA + + T + + + RV E + IP G I ++ED + Sbjct: 137 ENATMAAEGGAAWITIHGRTRVAGYAPPIHWEPIGRVRERLGIPVVANGDIWTVEDFKRC 196 Query: 93 LS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD--AETGKYHVNQYTGDE 149 G + ALADP L R+A G+ V D +D A+ + D Sbjct: 197 RDVTGCKHFMLGRGALADPRLARRVAAELGLVPPVEETDEPFDWAAQLRNLVEWSHRFDM 256 Query: 150 SRTRVTQWETLDWVQEVQKRG 170 R+ W++ + G Sbjct: 257 LRSDKNVSRLKQWLRLASQFG 277 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 50/169 (29%), Gaps = 14/169 (8%) Query: 73 IDIPFCV---AGGI-KSLEDAAKILSFGADKISIN---SPALADPTLITRLADRFGVQ-C 124 +P V G + E A + GA + +N + R ++ Sbjct: 46 TGLPVQVQLLGGDSGRMAESAVRAHELGATAVDVNFGCPAPTVNRHDGGAALLRHPLRIR 105 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 +VG G ++ + + + GA I ++ + Sbjct: 106 EIVGAIRAALPPHVPVSAKLRLGWDTLDAIH-----ENATMAAEGGAAWITIHGRTRVAG 160 Query: 185 RNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 E + +VRE +P++A+G T+E F + Sbjct: 161 YAPPIHWEPIGRVRERLGIPVVANGDIWTVEDFKRCRDVTGCKHFMLGR 209 >UniRef50_D0WEP2 tRNA-dihydrouridine synthase B n=2 Tax=Slackia RepID=D0WEP2_9ACTN Length = 318 Score = 64.1 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 36/112 (32%), Gaps = 1/112 (0%) Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVRE 198 + +D+ ++ GA + ++ + G + E + +V+ Sbjct: 119 VSCPVTVKFRRGFGAEEETAVDFGLRMEDAGAAAVTVHGRTAAQMYRGPSEWECVARVKA 178 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 VP+I +G + + R DG + A +++ L Sbjct: 179 ALSVPVIGNGDIVSGASAADMVRATGCDGVMIARGAQGNPWIFADVRRVLDG 230 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V R + GA + + TA+ R + V+RV + +P G I S AA Sbjct: 139 VDFGLRMEDAGAAAVTVHGRTAAQMYRGPSEWECVARVKAALSVPVIGNGDIVSGASAAD 198 Query: 92 ILSF-GADKISINSPALADPTLITRL 116 ++ G D + I A +P + + Sbjct: 199 MVRATGCDGVMIARGAQGNPWIFADV 224 >UniRef50_UPI000194DF67 PREDICTED: dihydrouridine synthase 3-like (S. cerevisiae) n=2 Tax=Taeniopygia guttata RepID=UPI000194DF67 Length = 718 Score = 63.7 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 57/167 (34%), Gaps = 14/167 (8%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITAS-SDGRVVDK 63 LDV VK + V +A + E GA + + + R D Sbjct: 495 VLDVP--VTVKIRTGVQEK-----VNVAHKLIPRIREWGASMVTLHGRSREQRYTRSADW 547 Query: 64 SWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 +++ A +P G I S EDA + + G I I AL P L T + ++ Sbjct: 548 HYIAECARLASPMPLFGNGDILSYEDANRAMQMGVSGIMIARGALIKPWLFTEIKEQ-RH 606 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 I + Y + + D T+ L+W+ + + Sbjct: 607 WDISSSERFEILKDFTNYGLEHWGSDTQGVEKTRKFLLEWLSFLCRY 653 Score = 46.8 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 3/87 (3%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEA 219 + +++ GA + L+ +++ D + + +PL +G + E A Sbjct: 518 LIPRIREWGASMVTLHGRSREQRYTRSADWHYIAECARLASPMPLFGNGDILSYEDANRA 577 Query: 220 FRDADVDGALAASVFHKQIINIGELKA 246 + V G + A + E+K Sbjct: 578 MQ-MGVSGIMIARGALIKPWLFTEIKE 603 >UniRef50_Q06063 tRNA-dihydrouridine synthase 4 n=23 Tax=Saccharomycetales RepID=DUS4_YEAST Length = 367 Score = 63.7 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 73/235 (31%), Gaps = 25/235 (10%) Query: 25 NHEIIGDIVPLAK---RYAEEGADEL---VFYDIT------ASSDGRVVDKSWVSRVAEV 72 + G V +A RY++ +L DI A R Sbjct: 32 RQKTHGRPVTIAGPMVRYSKLPFRQLCREYNVDIVYSPMILAREYVRNEHARISDLSTNN 91 Query: 73 IDIPFCVAGGIKSLEDAAKILSFG---ADKISINSPALADPTLITRLADRFGVQCIVVGI 129 D P V G+ ++ D K + D I IN ++ + G I Sbjct: 92 EDTPLIVQVGVNNVADLLKFVEMVAPYCDGIGINCGCPIK----EQIREGIGCALIYNSD 147 Query: 130 D--TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + A KY + R ET++ +++ G I ++ + + Sbjct: 148 LLCSMVHAVKDKYGDKLRIETKIRIHEALDETVELCRKLCDAGVDWITIHGRTRRTRSSQ 207 Query: 188 Y-DLEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +L+ +K + E +VP+IA+G + + G +A Sbjct: 208 PANLDAIKYIIENISDKNVPVIANGDCFKLSDLERITKYTGAHGVMAVRGLLSNP 262 >UniRef50_D2NNX0 tRNA-dihydrouridine synthase n=3 Tax=Actinobacteridae RepID=D2NNX0_9MICC Length = 442 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 2/125 (1%) Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 E + + L+ + + G I L+ +G D + Sbjct: 196 VKEASRNDIPLTIKMRKGIDDDHITFLESAKIARDAGVAAIALHGRTAAQHYSGKADWDS 255 Query: 193 LKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + ++RE+ VP++ +G + E + VDG + + G+L+ Sbjct: 256 IAQLRELIPDVPILGNGDIFSAEDAVRMVEQTGVDGVVIGRGCQGRPWLFGDLQNAFEGS 315 Query: 252 GVEIR 256 IR Sbjct: 316 SERIR 320 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 58/179 (32%), Gaps = 7/179 (3%) Query: 33 VPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAA 90 + AK + G + + TA+ D ++++ E+I D+P G I S EDA Sbjct: 222 LESAKIARDAGVAAIALHGRTAAQHYSGKADWDSIAQLRELIPDVPILGNGDIFSAEDAV 281 Query: 91 KILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 +++ G D + I P L L + F + ++ Sbjct: 282 RMVEQTGVDGVVIGRGCQGRPWLFGDLQNAFEGS----SERIRPTLTEVSDMIYRHAELL 337 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 T + L +++ + + + DL +++ + G Sbjct: 338 VETFGDETRGLREIRKHVAWYFKGYPVGGELRAKMAQVPDLATFRELIAQLDHSIGYPG 396 >UniRef50_A0M6M9 TRNA-dihydrouridine synthase n=16 Tax=Bacteroidetes RepID=A0M6M9_GRAFK Length = 330 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 75/239 (31%), Gaps = 32/239 (13%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI---DI-----PF- 77 E + D A E+GAD + T + A+ DI P Sbjct: 20 EDVSDPPFRA-LCKEQGADVVY----TEFISSEG----LIREAAKSTMKLDIYEKERPVG 70 Query: 78 --CVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 ++S L+ + G D I IN + ++ + I+ ID Sbjct: 71 IQIFGANLESMLQSVEIVEKSGPDIIDINFGCP-----VKKVVSKGAGAGILKDIDLMVS 125 Query: 135 AETGKY---HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDL 190 + + ++ + +Q G I ++ + + G D Sbjct: 126 LTEAMVKNTSLPITVKTRLGWDHDSIKIVEVAERLQDVGCKAISIHGRTRAQMYKGEADW 185 Query: 191 EQLKKVREVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + +V+ H+P+ +G + E +E + +DGA+ E+K Y Sbjct: 186 APIAEVKNNPRMHIPVFGNGDVDSPEKAMEMRDNFGLDGAMIGRASIGYPWFFREVKHY 244 >UniRef50_A0EG06 Chromosome undetermined scaffold_94, whole genome shotgun sequence n=4 Tax=Intramacronucleata RepID=A0EG06_PARTE Length = 360 Score = 63.3 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 64/162 (39%), Gaps = 8/162 (4%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AA ++ D I IN L P I R +G + + K ++N Sbjct: 90 AALMIQDQCDAIDIN---LGCPQGIAR-KGLYGAYLLEKREQVLTIVKELKQNINVPVTC 145 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLI 205 + R + TLD +++Q+ G + ++ ++ + D + +++++ +P+ Sbjct: 146 KIRMFKDRKRTLDLTKDIQEAGCSILTVHGRTKEQNKDFVGQCDWTIIAEIKQILQIPVF 205 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG-ELKA 246 A+GG T ++ VD +++ + E+K Sbjct: 206 ANGGIYTWSDVERCLQETKVDAVMSSEALLENPALFSGEIKD 247 Score = 52.9 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 4/85 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + L K E G L + T + D + ++ + +++ IP GGI + D Sbjct: 157 LDLTKDIQEAGCSILTVHGRTKEQNKDFVGQCDWTIIAEIKQILQIPVFANGGIYTWSDV 216 Query: 90 AKIL-SFGADKISINSPALADPTLI 113 + L D + + L +P L Sbjct: 217 ERCLQETKVDAVMSSEALLENPALF 241 >UniRef50_Q00XL7 TRNA-dihydrouridine synthase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00XL7_OSTTA Length = 295 Score = 63.0 bits (152), Expect = 9e-09, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 6/112 (5%) Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLK 194 + V G ES + T+ + ++ GA I+++ ++ D + ++ Sbjct: 33 DGAPLTVKIRLGIESSSPATKI-----AERLENAGAAAIIVHGRTKEQRYTKSADYDVIR 87 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 ++ +P+I +G T + + G + + E + Sbjct: 88 QIVSERAIPVIGNGDVLTWYDAQQRLDYSGCAGIMVGRGALIKPWIFKEFRE 139 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 2/88 (2%) Query: 34 PLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 +A+R GA ++ + T + D + ++ IP G + + DA + Sbjct: 53 KIAERLENAGAAAIIVHGRTKEQRYTKSADYDVIRQIVSERAIPVIGNGDVLTWYDAQQR 112 Query: 93 LS-FGADKISINSPALADPTLITRLADR 119 L G I + AL P + ++ Sbjct: 113 LDYSGCAGIMVGRGALIKPWIFKEFREK 140 >UniRef50_A8J121 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J121_CHLRE Length = 368 Score = 63.0 bits (152), Expect = 9e-09, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 51/174 (29%), Gaps = 13/174 (7%) Query: 86 LEDAAKIL--SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 LE A ++L G + +N + ++ R G + + + Sbjct: 63 LEQAVRLLVCEHGVQHVDLNFGCP-----VRKITARGGGSALPLRPRLFAKLVAAAVAGA 117 Query: 144 QYTGDESRTRVTQWET-----LDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVR 197 + L + + GA +VL+ D + D ++ + Sbjct: 118 GGEAPVTVKFRVGLTPELPTHLQAGRIAEAEGAAALVLHARTADQLYASPVDWAAVRALV 177 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 E +P++ +G L R+ G + + E+ A L Sbjct: 178 EAVRIPVVGNGDVFEGADALRLLRETGCAGVMVGRAAVGRPWVFDEVAAALTGA 231 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 6/136 (4%) Query: 37 KRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-S 94 + EGA LV + TA VD + V + E + IP G + DA ++L Sbjct: 143 RIAEAEGAAALVLHARTADQLYASPVDWAAVRALVEAVRIPVVGNGDVFEGADALRLLRE 202 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIV----VGIDTWYDAETGKYHVNQYTGDES 150 G + + A+ P + +A +G + V+ Y G Sbjct: 203 TGCAGVMVGRAAVGRPWVFDEVAAALTGAPPPPPPRLGEVVAAALRHAEMEVDWYRGYHD 262 Query: 151 RTRVTQWETLDWVQEV 166 R T +++ Sbjct: 263 SERDTLLRFRKFIKLY 278 >UniRef50_B9PUI2 Dihydrouridine synthase domain-containing protein, putative n=3 Tax=Toxoplasma gondii RepID=B9PUI2_TOXGO Length = 608 Score = 63.0 bits (152), Expect = 9e-09, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 43/152 (28%), Gaps = 6/152 (3%) Query: 97 ADKISINSPALADPTLITRLADRFGVQ--CIVVGIDTWYDAETGKYH-VNQYTGDESRTR 153 A + + L +P L+ + V + Sbjct: 248 ARRGHYGAFLLNEPELLVDIVSTLHKHLKTPVTCKMRKVSPRNPRDALPRSEAALVLDEE 307 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--GY-DLEQLKKVREVCHVPLIASGGA 210 +TL + G + ++ ++ G D ++ V++ +P+IA+G Sbjct: 308 RRLQDTLRLCDAFEAAGCACLCIHGRTKEEKAAFVGPCDWLAIRHVKQRLSIPVIANGAV 367 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 T E L D ++A + Sbjct: 368 ETYEDALRCLEFTGADAVMSAEGLLDNPMLFA 399 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 6/96 (6%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDIT----ASSDGRVVDKSWVSRVAEVIDIPFCV 79 + D + L + G L + T A+ G D + V + + IP Sbjct: 305 DEERRLQDTLRLCDAFEAAGCACLCIHGRTKEEKAAFVG-PCDWLAIRHVKQRLSIPVIA 363 Query: 80 AGGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 G +++ EDA + L GAD + L +P L Sbjct: 364 NGAVETYEDALRCLEFTGADAVMSAEGLLDNPMLFA 399 >UniRef50_Q1ZGI3 NifR3/Smm1 family protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGI3_9GAMM Length = 313 Score = 63.0 bits (152), Expect = 9e-09, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 4/101 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + A+ E GA+EL + T W++++ E IDIP Sbjct: 138 VKIRLGYADKSLA--IENAQAICEAGANELAVHARTKEEGYAPPAHWHWIAKIRESIDIP 195 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 G I S EDA + G + I ALA P L + Sbjct: 196 VTANGDIFSAEDAKRCHEISGCHSLMIGRGALATPNLAQVI 236 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 28/75 (37%), Gaps = 1/75 (1%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFL 217 ++ Q + + GA E+ ++ ++ + K+RE +P+ A+G + E Sbjct: 150 AIENAQAICEAGANELAVHARTKEEGYAPPAHWHWIAKIRESIDIPVTANGDIFSAEDAK 209 Query: 218 EAFRDADVDGALAAS 232 + + Sbjct: 210 RCHEISGCHSLMIGR 224 >UniRef50_A9V4A0 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V4A0_MONBE Length = 1116 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 43/121 (35%), Gaps = 2/121 (1%) Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + FG + + +++ + R T T ++Q ++ G I ++ Sbjct: 143 EGFGAYLMDDLPRVEAMLRAARAVLHKPITAKVRLFPTLTATRAYLQMLEAAGCSLIAIH 202 Query: 178 MMNQDG-VRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + G D +++ R+ +PL+ +GG ++ V G + A Sbjct: 203 ARLRGQRHHQGQPDFAMVREARDAVDIPLLVNGGVRSLRQAESVLEYTGVAGVMVAGALL 262 Query: 236 K 236 + Sbjct: 263 E 263 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 3/81 (3%) Query: 37 KRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 + G + + D + V + +DIP V GG++SL A +L Sbjct: 189 QMLEAAGCSLIAIHARLRGQRHHQGQPDFAMVREARDAVDIPLLVNGGVRSLRQAESVLE 248 Query: 95 -FGADKISINSPALADPTLIT 114 G + + L P L Sbjct: 249 YTGVAGVMVAGALLELPRLFA 269 >UniRef50_Q1NXZ7 Dihydrouridine synthase TIM-barrel protein nifR3 n=3 Tax=Deltaproteobacteria RepID=Q1NXZ7_9DELT Length = 313 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 46/159 (28%), Gaps = 22/159 (13%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 +P I K++ GA + + DP L + Sbjct: 92 LPID-GIDINMGCPVRKVVKKGA-----GAALMRDPELAAAITGAVTAA----------- 134 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 A V +G + D+ + + GA + ++ G D + Sbjct: 135 AGDLPVTVKIRSGWNHKQ----INAPDFARLLVAHGAAAVTIHARTWSDGFTGRADWAVI 190 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 V+ VP+I +G G+ E L DG + Sbjct: 191 AAVKRAVSVPVIGNGDIGSYEQALAMMAATGCDGVMIGR 229 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 3/103 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK NH+ I A+ GA + + T S D + ++ V + +P Sbjct: 142 VKIRSGWNHKQINAP-DFARLLVAHGAAAVTIHARTWSDGFTGRADWAVIAAVKRAVSVP 200 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLAD 118 G I S E A +++ G D + I AL P + T A+ Sbjct: 201 VIGNGDIGSYEQALAMMAATGCDGVMIGRGALGAPWVFTPGAE 243 >UniRef50_Q0F181 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F181_9PROT Length = 341 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 22/172 (12%), Positives = 53/172 (30%), Gaps = 9/172 (5%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY- 145 E A + GAD + IN + ++ + ++ Sbjct: 89 EAARWAVGHGADFVDINMGCP-----VKKICKQVAGSAMLRDEALVARVLAAVVAAVDVP 143 Query: 146 --TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHV 202 + + + + G + ++ + + +G+ E + + + Sbjct: 144 VTLKIRTGWDDQSKNVQNIARIAEDSGIQLLTVHGRTRAQMFHGHACWEDIGLAKAAVSI 203 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 P+I +G E E R ++ DG + +GE+ A +A + Sbjct: 204 PVIGNGDIVDAESAREMIRVSNCDGVMVGRAVQGNPWVLGEVHAAIAGLPIP 255 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 38/141 (26%), Gaps = 3/141 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD-KSWVSRVAEVIDIPF 77 K + + ++ +A+ + G L + T + + + IP Sbjct: 147 KIRTGWDDQ-SKNVQNIARIAEDSGIQLLTVHGRTRAQMFHGHACWEDIGLAKAAVSIPV 205 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I E A +++ D + + +P ++ + I Sbjct: 206 IGNGDIVDAESAREMIRVSNCDGVMVGRAVQGNPWVLGEVHAAIAGLPIPPKPTAAERWL 265 Query: 137 TGKYHVNQYTGDESRTRVTQW 157 H+ ++ Sbjct: 266 IVDEHMRHLVEHHGIRTASKL 286 >UniRef50_C2KNM7 Possible tRNA-dihydrouridine synthase n=4 Tax=Mobiluncus RepID=C2KNM7_9ACTO Length = 471 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 1/123 (0%) Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQ 192 + + V S LD + + G + L+ G+ E Sbjct: 221 EDSGRSFPVPVTVKIRSGIDAEHRIFLDVARVAEDNGVAAVTLHARTTSEYYGGHSHWED 280 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + + EV +P++ +G LE FR+ G + E+ A L Sbjct: 281 IAALVEVLDIPVLGNGDVFCAADALEMFRETGCAGVEIGRAVQGRPWIFREITAALWGLP 340 Query: 253 VEI 255 V + Sbjct: 341 VPV 343 Score = 58.3 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 2/128 (1%) Query: 33 VPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + +A+ + G + + T S G ++ + EV+DIP G + DA + Sbjct: 247 LDVARVAEDNGVAAVTLHARTTSEYYGGHSHWEDIAALVEVLDIPVLGNGDVFCAADALE 306 Query: 92 IL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + G + I P + + + VG A + H Sbjct: 307 MFRETGCAGVEIGRAVQGRPWIFREITAALWGLPVPVGPSLGEVANVARRHAEGLVAHYG 366 Query: 151 RTRVTQWE 158 V + Sbjct: 367 NELVALRD 374 >UniRef50_Q7QCT0 AGAP002791-PA (Fragment) n=3 Tax=Culicidae RepID=Q7QCT0_ANOGA Length = 396 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 5/99 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIP 76 V+ + + + ++ G L + TA + V K + + + I IP Sbjct: 154 VRLLS---STDHKRTIDMCRQLEATGITFLTVHGRTAPEMTKVPVHKDALQEIKQSIGIP 210 Query: 77 FCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLIT 114 G I +L+DA + L D + L++P L Sbjct: 211 MVANGDIFTLDDAEQMYLQTKCDGVMTARGILSNPALFA 249 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 44/137 (32%), Gaps = 15/137 (10%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S L P LI + + + T+D Sbjct: 123 GSALLKTPELIADMLGT--------------VRRNMPSTFSVSVKVRLLSSTDHKRTIDM 168 Query: 163 VQEVQKRGAGEIVLNMMNQ-DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 ++++ G + ++ + + + L+++++ +P++A+G T++ + + Sbjct: 169 CRQLEATGITFLTVHGRTAPEMTKVPVHKDALQEIKQSIGIPMVANGDIFTLDDAEQMYL 228 Query: 222 DADVDGALAASVFHKQI 238 DG + A Sbjct: 229 QTKCDGVMTARGILSNP 245 >UniRef50_B5IUS4 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Thermococcus barophilus MP RepID=B5IUS4_9EURY Length = 253 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 71/224 (31%), Gaps = 22/224 (9%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV----AGGIKSLEDA 89 +A+ E G D ++ T + V V + E +P + GGI DA Sbjct: 38 KIAQMCEEVGVDAVMVGGSTGAE--GEVLDEVVKAIKESSSLPVILFPGSHGGITKYADA 95 Query: 90 AKILSFGADKISINSPALADPTLI--TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +S + +P I + F V+ + + G Sbjct: 96 IFFMSLLNSR---------NPFFITGAQALGAFTVKRYRIEPIPMAYLIIEPGETVGWVG 146 Query: 148 D-ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 D + R + Q G + L G + ++ V+ V VPLI Sbjct: 147 DAKPIPRHKPKIAAAYALAGQYLGMRLVYLE--AGSGAPEHVPNDMIRAVKSVIDVPLIV 204 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 GG T E E + D + + ++ ++ E + L + Sbjct: 205 GGGIRTYEDAREV-AQSGADIIVTGTAI-EKAGSLEEARKRLES 246 >UniRef50_C1SJZ7 tRNA-dihydrouridine synthase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJZ7_9BACT Length = 340 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 2/102 (1%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIP 76 VK + + + + + K EEGA+ + + T + V + ++ +P Sbjct: 148 VKIRLGWDKKNL-NYNEMIKIAYEEGAEAVTVHGRTKTEMFSGVVNYDLIADAKANAKLP 206 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 G + + K+L+ G D + I + P L + + Sbjct: 207 IIGNGDVVDVATYEKMLATGVDGVMIGRGMMKQPWLFESILN 248 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 34/106 (32%), Gaps = 2/106 (1%) Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVC 200 V + ++ + GA + ++ + + +G + + + + Sbjct: 144 VPLTVKIRLGWDKKNLNYNEMIKIAYEEGAEAVTVHGRTKTEMFSGVVNYDLIADAKANA 203 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +P+I +G + + + VDG + KQ + Sbjct: 204 KLPIIGNGDVVDVATYEKML-ATGVDGVMIGRGMMKQPWLFESILN 248 >UniRef50_P44965 tRNA-dihydrouridine synthase B n=20 Tax=Pasteurellaceae RepID=DUSB_HAEIN Length = 330 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 17/187 (9%), Positives = 52/187 (27%), Gaps = 19/187 (10%) Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 +A+ I I + + ++ S L P L+ ++ Sbjct: 78 EMAQAAAINVEYGAQIIDIN--MGCPAKKVNRKLAGSALLQFPDLVEKILREV------- 128 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 +V + + + + ++ G + ++ + + G Sbjct: 129 ---------VSAVNVPVTLKIRTGWDKSNRNCVQIGKIAEQCGIQALTVHGRTRACLFEG 179 Query: 188 -YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + +K V++ +P+IA+G + D + ++ Sbjct: 180 EAEYDNIKAVKQAIAIPVIANGDIDSARKAKFVLNYTGADAIMIGRAALGNPWLFQAVEN 239 Query: 247 YLATQGV 253 + + Sbjct: 240 LIEHNSI 246 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 4/96 (4%) Query: 33 VPLAKRYAEEGADELVFYDITAS--SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 V + K + G L + T + +G + V + I IP G I S A Sbjct: 152 VQIGKIAEQCGIQALTVHGRTRACLFEGEAE-YDNIKAVKQAIAIPVIANGDIDSARKAK 210 Query: 91 KILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 +L+ GAD I I AL +P L + + I Sbjct: 211 FVLNYTGADAIMIGRAALGNPWLFQAVENLIEHNSI 246 >UniRef50_Q256J2 Dehydrogenases n=13 Tax=Chlamydiaceae RepID=Q256J2_CHLFF Length = 339 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 5/165 (3%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 E A + G D I +N D IT+ G+ I + G + Sbjct: 86 EAAKVLEGLGFDLIDLNCGCPTDR--ITKDGSGSGLLKTPELIGKVLEKIIGSVSIPVTV 143 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHV--P 203 S + V+ +++ GA + ++ + G +LE + + + P Sbjct: 144 KIRSGWDGNNINVEETVRIIKEAGASAVFVHGRTRAQGYVGPSNLEYIARAKAAAGKDFP 203 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + +G + E DG L A +++ YL Sbjct: 204 VFGNGDVFSPEAAKLMLDSTGCDGVLVARGTMGAPWIARQIEDYL 248 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 5/103 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI--D 74 VK + I ++ + E GA + + T + + +++R D Sbjct: 143 VKIRSGWDGNNI-NVEETVRIIKEAGASAVFVHGRTRAQGYVGPSNLEYIARAKAAAGKD 201 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 P G + S E A +L G D + + + P + ++ Sbjct: 202 FPVFGNGDVFSPEAAKLMLDSTGCDGVLVARGTMGAPWIARQI 244 >UniRef50_A0Z0J5 TRNA-dihydrouridine synthase B n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z0J5_9GAMM Length = 352 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 57/185 (30%), Gaps = 20/185 (10%) Query: 81 GGIKSLE-----------DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 GG++S++ A GAD I IN A ++ + ++ Sbjct: 78 GGLRSVQIVGSEPQQLANAARLNADDGADVIDINMGCPA-----KKVCKKAAGSALLADE 132 Query: 130 D---TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 D A V + Q + + + G + ++ + Sbjct: 133 DRVAEILKAVVSAVDVPVTLKIRTGVSPQQRNGVAIAKIAEDAGIQLLTVHGRTRADRFK 192 Query: 187 G-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 G + ++++ + +P++A+G T L + G + + G + Sbjct: 193 GEAEYHTIERIVDAVSIPVLANGDITTPAQALAVLQKTGAAGIMIGRAALGRPWLPGAIA 252 Query: 246 AYLAT 250 LA Sbjct: 253 QSLAG 257 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 2/88 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVD-KSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK + G L + T + + + R+ + + IP G I + A Sbjct: 166 VAIAKIAEDAGIQLLTVHGRTRADRFKGEAEYHTIERIVDAVSIPVLANGDITTPAQALA 225 Query: 92 IL-SFGADKISINSPALADPTLITRLAD 118 +L GA I I AL P L +A Sbjct: 226 VLQKTGAAGIMIGRAALGRPWLPGAIAQ 253 >UniRef50_C5CHS6 Dihydroorotate dehydrogenase family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHS6_KOSOT Length = 361 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 72/201 (35%), Gaps = 19/201 (9%) Query: 64 SWVSRVAEVIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPAL-ADPTLITRLA--- 117 ++ + E +P V+ G ++ LE + AD +++ + DP L+ L Sbjct: 82 EFIPKFREKSSLPLIVSLGYTVEDLEVLVPMFDDLADAFELSTHYVADDPELMKHLIRTV 141 Query: 118 DRFGVQCIVVGIDTWY-DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + + + + D + E V + GD + +E++ G Sbjct: 142 KKHTDKPVFLKFDPSVPEPEVMAKAVEEAGGDGIVAINSLGPGYPLYRELKSSPLG---- 197 Query: 177 NMMNQDGVRNGY-----DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA-LA 230 + G +G L +K+V C++P+I GG + + ++ F A L Sbjct: 198 -STHGFGWISGPVIKPIALAMVKRVASSCNLPIIGVGGISSADDVID-FIMAGASAVQLL 255 Query: 231 ASVFHKQIINIGELKAYLATQ 251 + ++ A L + Sbjct: 256 SGALLYGKSIYKKIIADLPKK 276 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA-LADPTLITRLA 117 + + + V RVA ++P GGI S +D + GA + + S A L ++ ++ Sbjct: 211 KPIALAMVKRVASSCNLPIIGVGGISSADDVIDFIMAGASAVQLLSGALLYGKSIYKKII 270 Query: 118 DRFGVQ 123 + Sbjct: 271 ADLPKK 276 >UniRef50_O67533 Probable tRNA-dihydrouridine synthase n=1 Tax=Aquifex aeolicus RepID=DUS_AQUAE Length = 316 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 9/182 (4%) Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-----SFGADKISINSPALADPTLITRLADRFGVQCI 125 E I V G + E+ A+ D I IN P ++ A + +QC Sbjct: 58 EERPIHIQVFG--SNPEEIAQASVVIAKELKPDFIDINFGCSV-PKVLRNKAAGYMLQCP 114 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + + + + R + E V+E+QK G I ++ Sbjct: 115 PLMGEVVKETVEALKPYGIPVSAKIRLGFEKDEVERIVEELQKAGVSLIAIHARTAKQGF 174 Query: 186 NGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 +G ++K+ ++V VP+I SG + F + + DG + E Sbjct: 175 SGKALWHRIKEAKKVASVPIIGSGDVKSWRDIERMFEETECDGVMVGRAALSNPWIFKEF 234 Query: 245 KA 246 K Sbjct: 235 KE 236 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 2/87 (2%) Query: 35 LAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + + + G + + TA + +V +P +G +KS D ++ Sbjct: 151 IVEELQKAGVSLIAIHARTAKQGFSGKALWHRIKEAKKVASVPIIGSGDVKSWRDIERMF 210 Query: 94 -SFGADKISINSPALADPTLITRLADR 119 D + + AL++P + ++ Sbjct: 211 EETECDGVMVGRAALSNPWIFKEFKEK 237 >UniRef50_A7BE39 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BE39_9ACTO Length = 411 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 41/146 (28%), Gaps = 5/146 (3%) Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 P +D G V G +S D QK Sbjct: 150 PWKRDLFSDLVGAVVRACDEAGERAGREIPVTVKIRIGIDSEHE----TATDAALNAQKL 205 Query: 170 GAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 GA + L+ Q+ G+ +++ +++++ +P+ +G L DG Sbjct: 206 GAAALTLHARTQNQHYAGHAHWDEIARLKDLLDIPVFGNGDVFEAADALAMLEQTGCDGI 265 Query: 229 LAASVFHKQIINIGELKAYLATQGVE 254 + ++ A + Sbjct: 266 SVGRGAQGRPWIFRDIVAAYHGGSIP 291 Score = 53.3 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 2/94 (2%) Query: 34 PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 A + GA L + T + ++R+ +++DIP G + DA + Sbjct: 197 DAALNAQKLGAAALTLHARTQNQHYAGHAHWDEIARLKDLLDIPVFGNGDVFEAADALAM 256 Query: 93 LS-FGADKISINSPALADPTLITRLADRFGVQCI 125 L G D IS+ A P + + + I Sbjct: 257 LEQTGCDGISVGRGAQGRPWIFRDIVAAYHGGSI 290 >UniRef50_B9CKJ9 tRNA-dihydrouridine synthase B n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKJ9_9ACTN Length = 361 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 58/207 (28%), Gaps = 10/207 (4%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 G V + DI + G E + S A+++ AL D + Sbjct: 74 GIHFGGEKTWQLVYPLDPEPDIAVQLFG--SKPEQFREAASQIAERLG-PKLALIDINMA 130 Query: 114 TRLADRFGVQCIVVGIDTWYDAET------GKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + +D A + V V ++ + ++ Sbjct: 131 CPVPKVVKKGEGSALLDNPVRAAEIVRACISEVDVPVTAKIRRGRTVGSECAPEFARALE 190 Query: 168 KRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 GA + ++ + G D +++V +P+I SG + + + Sbjct: 191 AAGAAAVTVHGRFASQLYQGKADWNCVERVVCAVSIPVIGSGDVMSAHDAARVLKTTGIS 250 Query: 227 GALAASVFHKQIINIGELKAYLATQGV 253 + A + + A + + Sbjct: 251 AVMLARGTYGDPWIFANTRRACAEKEL 277 >UniRef50_A3XQ63 PcrB-like protein n=3 Tax=Flavobacteriaceae RepID=A3XQ63_9FLAO Length = 241 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 9/110 (8%) Query: 3 AKRIIPC--LDVRDGQV-----VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS 55 A IIP + + G+ V Q E++ IV A G + + + Sbjct: 128 ALEIIPTGYILIDGGKQTTVERVSQTQAIPQELVQRIVDTALAGEYSGKKLIYLEAGSGA 187 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 V + + V + I IP V GGI+S I + GAD + + + Sbjct: 188 L--NPVSEEIIQAVKDAISIPLIVGGGIRSQLKLEAIYAAGADLVVVGTA 235 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 68/222 (30%), Gaps = 25/222 (11%) Query: 31 DIVPLAKRYAEEGADEL-----VFYDITASSDGRVVDKSWVSRVAEVIDIPFCV-AGGIK 84 D L++ + + +L + S+ + + V+ + + +P + G + Sbjct: 32 DPEELSETFLTQQLSKLPEFTTHIL-VGGSTATQAQTQVAVNLIKQKTSLPVLLFPGDYR 90 Query: 85 SLEDAAKILSFGADKISINSPALADPT-LITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 + AA G +S+ S +P LI + G Sbjct: 91 QITAAAD----GILFLSLLSG--ENPEYLIRQQIQSVGKLRASALE---IIPTGYILIDG 141 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGE------IVLNMMNQDGVRNGYDLEQLKKVR 197 R TQ + VQ + ++ G N E ++ V+ Sbjct: 142 GKQTTVERVSQTQAIPQELVQRIVDTALAGEYSGKKLIYLEAGS-GALNPVSEEIIQAVK 200 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + +PLI GG + EA A D + + F + Sbjct: 201 DAISIPLIVGGGIRSQLKL-EAIYAAGADLVVVGTAFEQGNF 241 >UniRef50_A4IM35 Dihydroorotate dehydrogenase n=348 Tax=Bacteria RepID=PYRD_GEOTN Length = 313 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 21/114 (18%) Query: 29 IGDIVPLAKRYAEEGADELV------------------FYDITASSDG---RVVDKSWVS 67 + DIV +AK + GAD L + T G + + + Sbjct: 170 VTDIVAMAKAIEQAGADGLTMINTLVGMRIDVKTGRPILANGTGGLSGPAVKPIAVRMIY 229 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V++ + IP GG+++ ED + GA +++ + DP + + + Sbjct: 230 EVSQAVSIPIIGMGGVQTAEDVLEFFYAGASAVAVGTANFIDPFVCPTIINELP 283 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 50/185 (27%), Gaps = 29/185 (15%) Query: 71 EVIDIPFCVA-GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 E D+P G E + + + FG V Sbjct: 90 EQFDVPIIANIAGSTMEEYVEVAAAISKAPNVHALELNISCPNVKKGGIAFGTVPEVAAE 149 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM------MNQD- 182 T E V + + + + +++ GA + + ++ Sbjct: 150 LTRLVKEVSAVPVYV------KLSPNVTDIVAMAKAIEQAGADGLTMINTLVGMRIDVKT 203 Query: 183 ---------GVRNGYDLEQLK-----KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 G +G ++ + +V + +P+I GG T E LE F A Sbjct: 204 GRPILANGTGGLSGPAVKPIAVRMIYEVSQAVSIPIIGMGGVQTAEDVLEFFY-AGASAV 262 Query: 229 LAASV 233 + Sbjct: 263 AVGTA 267 >UniRef50_B9L781 tRNA-dihydrouridine synthase B n=1 Tax=Nautilia profundicola AmH RepID=B9L781_NAUPA Length = 313 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 1/89 (1%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 D + ++ G + ++ + G D +++KK +P+IA+G E Sbjct: 153 VEDRAKLLEDLGIVFLTIHGRTVKQMYKGEADYDEIKKGVNAVKIPVIANGDITDYEKAK 212 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKA 246 G + E+K Sbjct: 213 YVLEYTGASGVSIGRGAVGKPWIFLEMKQ 241 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 2/87 (2%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 AK + G L + T + D + + + IP G I E A + Sbjct: 155 DRAKLLEDLGIVFLTIHGRTVKQMYKGEADYDEIKKGVNAVKIPVIANGDITDYEKAKYV 214 Query: 93 LS-FGADKISINSPALADPTLITRLAD 118 L GA +SI A+ P + + Sbjct: 215 LEYTGASGVSIGRGAVGKPWIFLEMKQ 241 >UniRef50_Q9BTJ3 DUS1L protein (Fragment) n=7 Tax=Euteleostomi RepID=Q9BTJ3_HUMAN Length = 299 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 23/116 (19%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---R 59 R+ P +D + V+ A+ + G L + T G Sbjct: 16 KIRVFPEID----KTVR---------------YAQMLEKAGCQLLTVHGRTKEQKGPLSG 56 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLIT 114 + V + + IP G I+ L+D + L G + L +P L Sbjct: 57 AASWEHIKAVRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFE 112 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLIASGGAGTME 214 +T+ + Q ++K G + ++ ++ E +K VR+ +P+ A+G ++ Sbjct: 25 KTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKAVRKAVAIPVFANGNIQCLQ 84 Query: 215 HFLEAFRDADVDGALAAS------VFHKQI 238 RD V G ++A + Sbjct: 85 DVERCLRDTGVQGVMSAEGNLHNPALFEGR 114 >UniRef50_Q6P1R4 tRNA-dihydrouridine synthase 1-like n=12 Tax=Euteleostomi RepID=DUS1L_HUMAN Length = 473 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 23/116 (19%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---R 59 R+ P +D + V+ A+ + G L + T G Sbjct: 147 KIRVFPEID----KTVR---------------YAQMLEKAGCQLLTVHGRTKEQKGPLSG 187 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLIT 114 + V + + IP G I+ L+D + L G + L +P L Sbjct: 188 AASWEHIKAVRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFE 243 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 9/90 (10%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLIASGGAGTME 214 +T+ + Q ++K G + ++ ++ E +K VR+ +P+ A+G ++ Sbjct: 156 KTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKAVRKAVAIPVFANGNIQCLQ 215 Query: 215 HFLEAFRDADVDGALAAS------VFHKQI 238 RD V G ++A + Sbjct: 216 DVERCLRDTGVQGVMSAEGNLHNPALFEGR 245 >UniRef50_D2R6Z1 TIM-barrel protein, nifR3 family n=3 Tax=Planctomycetaceae RepID=D2R6Z1_9PLAN Length = 345 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 17/154 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S L P I ++ +R C + + ++ Sbjct: 121 GSYLLKFPDRIAQIVERVVKACAPTPVTAKIRLGCSRDA---------------INAIEI 165 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAF 220 + V+ GA + ++ G D ++ +++ +PLI +G + E +EAF Sbjct: 166 AKVVESAGAAALTVHGRTAADFFRGTADWNRIAEIKPHLKKIPLIGNGDLDSPEKVIEAF 225 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 R VDG + A + + A L + V Sbjct: 226 RRYGVDGVMIARASMGRPWLFRQAAAALRGEPVP 259 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 3/103 (2%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI-DIPFCVAGGI 83 + + +AK GA L + TA+ R D + ++ + + IP G + Sbjct: 156 SRDAINAIEIAKVVESAGAAALTVHGRTAADFFRGTADWNRIAEIKPHLKKIPLIGNGDL 215 Query: 84 KSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCI 125 S E + G D + I ++ P L + A + + Sbjct: 216 DSPEKVIEAFRRYGVDGVMIARASMGRPWLFRQAAAALRGEPV 258 >UniRef50_UPI00015B403F PREDICTED: similar to MGC79829 protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B403F Length = 346 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 37/81 (45%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 +T+++ + ++ G + ++ D DL+ LK VR H+P+IA+G + E Sbjct: 153 KTIEFSRAIEHAGVSFLTVHARTPDMRNEPIDLDSLKLVRSCVHLPMIANGNVRSFEDAK 212 Query: 218 EAFRDADVDGALAASVFHKQI 238 + ++ +G + A Sbjct: 213 TLYEESKCNGVMVAGGILTNP 233 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 1/95 (1%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 V+ R + I + ++ G L + T +D + V + +P Sbjct: 142 SVKIRILKDIKKTIEFSRAIEHAGVSFLTVHARTPDMRNEPIDLDSLKLVRSCVHLPMIA 201 Query: 80 AGGIKSLEDAAKIL-SFGADKISINSPALADPTLI 113 G ++S EDA + + + + L +P + Sbjct: 202 NGNVRSFEDAKTLYEESKCNGVMVAGGILTNPAIF 236 >UniRef50_Q7ZWS1 tRNA-dihydrouridine synthase 3-like n=3 Tax=Xenopus RepID=DUS3L_XENLA Length = 640 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 14/159 (8%) Query: 18 VKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITAS-SDGRVVDKSWVSRVAE- 71 VK + V +A + + G + + + ++ + ++ + A+ Sbjct: 424 VKIRTGVQEK-----VNIAHKLIPNLRDWGVSLVTLHGRSREQRYTKLANWEYIDQCAKI 478 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD-RFGVQCIVVGID 130 +P G I S EDA + L G + + AL P L T + + R D Sbjct: 479 ASPVPLFGNGDIISYEDANRALQTGVAGVMLARGALFKPWLFTEIKEQRHWDISSTERFD 538 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 D Y + + D T+ L+W+ + + Sbjct: 539 ILKDFTN--YGLEHWGSDCQGVEKTRKFMLEWLSFLCRY 575 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 23/194 (11%), Positives = 59/194 (30%), Gaps = 4/194 (2%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKILSFGADKISINSPALADPTLIT 114 G+ + + + R + G ++ A++L+ D ++ L+ Sbjct: 333 LQGQPSEWALLKRHHSEDIFGVQLEGAFPDTMTKCAELLNRTIDVDFVDINVGCPIDLVY 392 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + G+ + V + + + ++ G + Sbjct: 393 KKGGGCGLMNRTNKFEQIVKGMNSVLDVPLTVKIRTGVQEKVNIAHKLIPNLRDWGVSLV 452 Query: 175 VLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 L+ +++ + E + + + VPL +G + E A + V G + A Sbjct: 453 TLHGRSREQRYTKLANWEYIDQCAKIASPVPLFGNGDIISYEDANRALQ-TGVAGVMLAR 511 Query: 233 VFHKQIINIGELKA 246 + E+K Sbjct: 512 GALFKPWLFTEIKE 525 >UniRef50_B1LWM8 TIM-barrel protein, nifR3 family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LWM8_METRJ Length = 341 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 14/115 (12%), Positives = 33/115 (28%), Gaps = 1/115 (0%) Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKV 196 G + D ++ G + ++ + G D ++ V Sbjct: 143 GAVSIPVTVKMRLGWDDASRNAADLAARAERLGLNAVTVHGRTRQQFYKGRADWAAIRAV 202 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +P+IA+G + G + + +G++ A L + Sbjct: 203 VAAVSIPVIANGDVTDFASARACLDASGAAGVMIGRAATGRPWLVGQVAAALTGR 257 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 3/111 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + + LA R G + + + T D + + V + IP Sbjct: 151 VKMRLGWDDA-SRNAADLAARAERLGLNAVTVHGRTRQQFYKGRADWAAIRAVVAAVSIP 209 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIV 126 G + A L GA + I A P L+ ++A + Sbjct: 210 VIANGDVTDFASARACLDASGAAGVMIGRAATGRPWLVGQVAAALTGRPAA 260 >UniRef50_Q9RDC6 Putative uncharacterized protein SCO2497 n=4 Tax=Bacteria RepID=Q9RDC6_STRCO Length = 406 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 3/95 (3%) Query: 33 VPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAA 90 + + EEG + + T + G D ++R+ E + IP G I S EDA Sbjct: 171 LDAGRIAVEEGVTAIALHGRTTAQHYGGTADWDAIARLKEHVPEIPVLGNGDIWSAEDAL 230 Query: 91 KIL-SFGADKISINSPALADPTLITRLADRFGVQC 124 +++ G D + + L P L L F + Sbjct: 231 RMVRETGCDGVVVGRGCLGRPWLFADLVAAFEGRT 265 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 2/121 (1%) Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLE 191 +A TG + LD + + G I L+ G D + Sbjct: 144 REAVTGAGDLPVTMKMRKGLDDDHLTYLDAGRIAVEEGVTAIALHGRTTAQHYGGTADWD 203 Query: 192 QLKKVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + +++E +P++ +G + E L R+ DG + + +L A Sbjct: 204 AIARLKEHVPEIPVLGNGDIWSAEDALRMVRETGCDGVVVGRGCLGRPWLFADLVAAFEG 263 Query: 251 Q 251 + Sbjct: 264 R 264 >UniRef50_UPI000179183B PREDICTED: similar to tRNA-dihydrouridine synthase 4-like (PP35) n=1 Tax=Acyrthosiphon pisum RepID=UPI000179183B Length = 350 Score = 61.0 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPF 77 VK +H V L ++ G + + TA +D+ + + E + +P Sbjct: 146 VKLRLLDDHRQS---VDLCQQIEATGVSFITVHGRTALQKNEPIDQECLKLINESVSVPV 202 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 + G IK+L DA + G + L +P L Sbjct: 203 ILNGDIKNLSDAITMQEYTGCRGMMSARGILHNPGLFA 240 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 11/169 (6%) Query: 76 PFCVAGGIKSLED---AAKILSFGADKISINSPALADPTLITRLADRFGVQCI---VVGI 129 P V G + D A+ ++ D + +N L + +G Q + + Sbjct: 73 PLIVQFGANNSSDFVNASNLIIPYCDGVDLNCGCPQRWAL----NEGYGAQLLKNPEIIK 128 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 D N+ + R +++D Q+++ G I ++ D Sbjct: 129 DCVRQLRNH-LPTNKTISVKLRLLDDHRQSVDLCQQIEATGVSFITVHGRTALQKNEPID 187 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 E LK + E VP+I +G + + G ++A Sbjct: 188 QECLKLINESVSVPVILNGDIKNLSDAITMQEYTGCRGMMSARGILHNP 236 >UniRef50_C9KKE5 Dihydroorotate oxidase n=6 Tax=Bacteria RepID=C9KKE5_9FIRM Length = 316 Score = 61.0 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 21/111 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVS 67 + DIV +AK GAD + + IT G + V V Sbjct: 171 VTDIVAMAKAVEAAGADAVSLINTLLGMEIDIHRFRPVLGNITGGLSGPCVKPVAVRMVW 230 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 +VA+ + IP GGI S EDA + GA +++ + DP + ++ D Sbjct: 231 QVAQAVHIPIIGMGGIASAEDAVEFFLAGASAVAVGTANFTDPEITMKICD 281 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 5/63 (7%) Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV-FHKQIINIG---ELKAYLAT 250 +V + H+P+I GG + E +E F A + F I + L YLA Sbjct: 231 QVAQAVHIPIIGMGGIASAEDAVEFF-LAGASAVAVGTANFTDPEITMKICDGLTDYLAE 289 Query: 251 QGV 253 G Sbjct: 290 NGF 292 >UniRef50_Q8SUV4 Putative uncharacterized protein ECU07_1610 n=1 Tax=Encephalitozoon cuniculi RepID=Q8SUV4_ENCCU Length = 341 Score = 61.0 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 53/155 (34%), Gaps = 14/155 (9%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +AA I+ D I +N + R G + + E K + Sbjct: 84 EAALIIQDHCDAIDVNFGC-------PQKVARKGGYGAYLQENWKLTGEIVKVLSSGLNV 136 Query: 148 D---ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCH 201 + R + +T+++ + +++ G + ++ +D + ++ ++E Sbjct: 137 PVFCKIRVFGSIEKTVEYAKMIEEAGCSLLAVHGRTRDQRGAAMGFASWKHIRAIKENLR 196 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASV-FH 235 +P++++G T DG + H Sbjct: 197 IPVLSNGNIMTHHDVWRCLEYTGCDGVMVGEAHLH 231 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 4/86 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 V AK E G L + T G + + E + IP G I + D Sbjct: 152 VEYAKMIEEAGCSLLAVHGRTRDQRGAAMGFASWKHIRAIKENLRIPVLSNGNIMTHHDV 211 Query: 90 AKILS-FGADKISINSPALADPTLIT 114 + L G D + + L +P + T Sbjct: 212 WRCLEYTGCDGVMVGEAHLHNPLIFT 237 >UniRef50_C4QMR1 tRNA-dihydrouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4QMR1_SCHMA Length = 441 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPLIASGGAGTM 213 T+ + + ++ GA + ++ ++ D Q++ V+E +P+IA+G + Sbjct: 146 ERTVQYAKLLEAAGASMLTVHGRTREMKGQKTGLADWNQIRAVKEAVKIPVIANGNIQYL 205 Query: 214 EHFLEAFRDADVDGALAA 231 + D ++A Sbjct: 206 SDVHQCLDSTKADAVMSA 223 Score = 60.6 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 4/85 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 V AK GA L + T G+ D + + V E + IP G I+ L D Sbjct: 149 VQYAKLLEAAGASMLTVHGRTREMKGQKTGLADWNQIRAVKEAVKIPVIANGNIQYLSDV 208 Query: 90 AKILS-FGADKISINSPALADPTLI 113 + L AD + L +P L Sbjct: 209 HQCLDSTKADAVMSAEGHLHNPALF 233 >UniRef50_B9ZKT6 TIM-barrel protein, nifR3 family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKT6_9GAMM Length = 330 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 3/170 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A + + GAD I +N A + + A V Sbjct: 81 AEAARENVRRGADVIDLNLGCPAKKVCSKAAGSALLGEP--ERVRELLTALVESVEVPVT 138 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + Q G + ++ + G D E + +V +P+ Sbjct: 139 LKMRLGLDRERVNAETIAGIAQDCGIAMLTVHGRTRADAYRGTADYEAIARVVRAVSIPV 198 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +A+G + A + G + + G+++A LA + V Sbjct: 199 LANGDVVDIGSARRALAISGATGLMIGRGAQGRPWLPGQIRASLAGEPVP 248 Score = 53.3 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 47/152 (30%), Gaps = 4/152 (2%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGG 82 + + +A + G L + T + R D ++RV + IP G Sbjct: 146 DRERV--NAETIAGIAQDCGIAMLTVHGRTRADAYRGTADYEAIARVVRAVSIPVLANGD 203 Query: 83 IKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 + + A + L+ GA + I A P L ++ + + + H Sbjct: 204 VVDIGSARRALAISGATGLMIGRGAQGRPWLPGQIRASLAGEPVPADPAWDARLALIEEH 263 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + + + +Q G GE Sbjct: 264 LRALHAQYGEMQGVRIARKHLGWYLQHMGLGE 295 >UniRef50_Q3MB47 Dihydrouridine synthase, DuS n=6 Tax=Bacteria RepID=Q3MB47_ANAVT Length = 378 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 25/224 (11%), Positives = 62/224 (27%), Gaps = 38/224 (16%) Query: 48 VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD--------- 98 + IT + GR V + IP V ++ ++ G D Sbjct: 62 ILAAITENDTGRPVFAQMIGE-----SIPDLV----RTAKELCHYDIAGVDLNMGCPAPR 112 Query: 99 --KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 + ++ L P + ++ V G E+ Sbjct: 113 IYRKNVGGGLLLSPGKVEQILAEL-----------RQAVSDRPLTVKMRVGFENTDTF-- 159 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEH 215 + + V + + L+ + +G + + + + P++A+G + Sbjct: 160 ---YEILDIVNRHNIDLLSLHGRTVKDMYHGAVKYDLIAEAVKRVDCPVLANGNIHSATT 216 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV-EIRIC 258 LE G + +++ L + + + + Sbjct: 217 ALEVLERTGAAGVMVGRWAIGNPWLFNQIRQALRGEPITPVPLV 260 >UniRef50_C9LMP9 tRNA-dihydrouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMP9_9FIRM Length = 330 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 48/166 (28%), Gaps = 3/166 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + GAD + IN + + D + V A T + Sbjct: 86 AKVMEKAGADIVDINMGCPMQK--VVKNGDGSALMKNVTLAAEIISAVTAAVKIPVTIKM 143 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 ++ + GA I ++ ++ G D ++KKV + +P+I + Sbjct: 144 RLGWSRDTINAVELAMAAESAGAAAITVHGRTREDFYMGTADWREIKKVVDAVRIPVIGN 203 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 G G + G + YL T + Sbjct: 204 GDVGDGPAAKALMEETGCAAVAIGRAAWGNPWVFGAVNTYLETGEI 249 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 40/127 (31%), Gaps = 2/127 (1%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 + V LA GA + + T D + +V + + IP G + Sbjct: 148 SRDTINAVELAMAAESAGAAAITVHGRTREDFYMGTADWREIKKVVDAVRIPVIGNGDVG 207 Query: 85 SLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 A ++ G ++I A +P + + I+ G + H++ Sbjct: 208 DGPAAKALMEETGCAAVAIGRAAWGNPWVFGAVNTYLETGEILPGPSWEERLAMARKHLH 267 Query: 144 QYTGDES 150 ++ Sbjct: 268 GLCVEKG 274 >UniRef50_A3QE46 2-nitropropane dioxygenase, NPD n=20 Tax=Gammaproteobacteria RepID=A3QE46_SHELP Length = 361 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 24/160 (15%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 LE AA + GA ++ N I + F + V+ E V + Sbjct: 98 LEIAADLGQGGASRMPFN-------HEIADAIEAFKPE--VISFHFGLPQENLLERVRSW 148 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE----------QLKK 195 + T E G I++ + G R + + L K Sbjct: 149 GAKVISSATTVAEAEYLAAR----GVDGIIVQGVEAGGHRGMFLSDDVSTQVELEPLLTK 204 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + PLIA+GG G H ++A S + Sbjct: 205 IASRVDAPLIAAGGIGD-SHGVKAALAMGASAVQIGSAYL 243 Score = 42.1 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 10/89 (11%) Query: 33 VPLAKRYAEEGADELVFYDITAS----------SDGRVVDKSWVSRVAEVIDIPFCVAGG 82 V A+ A G D ++ + A +V + ++++A +D P AGG Sbjct: 159 VAEAEYLAARGVDGIIVQGVEAGGHRGMFLSDDVSTQVELEPLLTKIASRVDAPLIAAGG 218 Query: 83 IKSLEDAAKILSFGADKISINSPALADPT 111 I L+ GA + I S L Sbjct: 219 IGDSHGVKAALAMGASAVQIGSAYLLCDE 247 >UniRef50_Q9JUP6 tRNA-dihydrouridine synthase C n=23 Tax=Neisseriaceae RepID=DUSC_NEIMA Length = 333 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 7/116 (6%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGI 83 +E + A AE GA L + T + W+ ++ + +DIP G + Sbjct: 155 GYEDKSPALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVDIPVTANGDV 214 Query: 84 KSLED---AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 SL+D I G + + + A+ P L ++ ++ V D ++ Sbjct: 215 FSLQDYIGIKTI--SGCNSVMLGRGAVIRPDLARQI-KQYENGGPVKDTDFAEVSK 267 Score = 53.3 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 59/172 (34%), Gaps = 4/172 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 +A + + FGADKI +N A + + ++ E H+ Sbjct: 90 AANALEAVRFGADKIDLNFGCPAPTVNRHKGGAILLKEPELIFHIVKTLRERLPAHIPLT 149 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 L+ + + GA + ++ + E ++K+R+ +P+ Sbjct: 150 AKMRLGYEDKS-PALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVDIPV 208 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 A+G +++ ++ + + + + ++K Y G ++ Sbjct: 209 TANGDVFSLQDYIGIKTISGCNSVMLGRGAVIRPDLARQIKQY--ENGGPVK 258 >UniRef50_UPI000186DA49 tRNA-dihydrouridine synthase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186DA49 Length = 332 Score = 60.6 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 51/142 (35%), Gaps = 16/142 (11%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 A KI I + L++P I + + N + R Sbjct: 106 AMKIGIGAQLLSEPETIKDIV----------------LNVKNQISCNYSVSVKLRLLNDI 149 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 T+D ++++K G + ++ ++ ++ +K + + +P+IA+G T++ Sbjct: 150 KSTVDLCKKLEKTGVTFLTIHGRTKEQRSEPVNIAAIKDIVDSVQIPIIANGDVKTLQDA 209 Query: 217 LEAFRDADVDGALAASVFHKQI 238 + G ++A + Sbjct: 210 QLLQQLTGCQGVMSARGLLQNP 231 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 1/96 (1%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 V+ R I V L K+ + G L + T V+ + + + + + IP Sbjct: 140 SVKLRLLNDIKSTVDLCKKLEKTGVTFLTIHGRTKEQRSEPVNIAAIKDIVDSVQIPIIA 199 Query: 80 AGGIKS-LEDAAKILSFGADKISINSPALADPTLIT 114 G +K+ + G + L +P+L Sbjct: 200 NGDVKTLQDAQLLQQLTGCQGVMSARGLLQNPSLFQ 235 >UniRef50_C4VA23 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4VA23_NOSCE Length = 327 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 73/205 (35%), Gaps = 15/205 (7%) Query: 35 LAKRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCV---AGGIKSLEDA 89 LA+RY GAD + ++ S ID P + + + Sbjct: 28 LARRY---GADICYTEMVNCDTFIRSKINPLSNRWYTTNKIDRPLIIQICGNDVNKMLKV 84 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + IL D I IN L P I R +G + + ++ + Sbjct: 85 SLILQEYCDAIDIN---LGCPQEIAR-KGNYGSFLMDDLLKVKEIVTVLSNNLKVPVTCK 140 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNG-YDLEQLKKVREVCHVPLIA 206 R + +++++ + +++ G + ++ +D G+ G + ++ ++ ++P+I+ Sbjct: 141 IRIFESIEKSVEYAKMIEQAGCKMLTVHGRTRDQRGLNTGLASWDHIRAIKASLNIPVIS 200 Query: 207 SGGAGTMEHFLEAFRDADVDGALAA 231 +G DG + A Sbjct: 201 NGNIINNSDIDNCVEYTKCDGVMVA 225 >UniRef50_A8N483 Putative uncharacterized protein n=2 Tax=Agaricales RepID=A8N483_COPC7 Length = 561 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 4/96 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 +FR + V AK GA L + G+ D S + V E + +P Sbjct: 171 KFRVFPDVEKTVEYAKMLERAGAQILTCHGRIREQRGQNTGLADWSKIRAVKEAVKVPVF 230 Query: 79 VAGGIKSLEDAAKIL-SFGADKISINSPALADPTLI 113 G I +D A+ L G D + L +P L Sbjct: 231 ANGNILFQDDIARCLEETGCDGVMSAEGILYNPALF 266 Score = 60.3 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 35/85 (41%), Gaps = 3/85 (3%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRN---GYDLEQLKKVREVCHVPLIASGGAGTM 213 +T+++ + +++ GA + + ++ D +++ V+E VP+ A+G Sbjct: 179 EKTVEYAKMLERAGAQILTCHGRIREQRGQNTGLADWSKIRAVKEAVKVPVFANGNILFQ 238 Query: 214 EHFLEAFRDADVDGALAASVFHKQI 238 + + DG ++A Sbjct: 239 DDIARCLEETGCDGVMSAEGILYNP 263 >UniRef50_Q5KP54 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans RepID=Q5KP54_CRYNE Length = 610 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 26/160 (16%) Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 D+ I DP ++ A + +C V I+ K + + + Sbjct: 149 DRPLIVQFCANDPDILLAAAKKVEHRCDAVDINFGCPQGIAKRGHYGSFLQDEWELIHKL 208 Query: 158 -----------------------ETLDWVQEVQKRGAGEIVLNMMNQDGVRN---GYDLE 191 +T+ + + ++ GA + + ++ D E Sbjct: 209 ISTLHENLSVPVTAKFRIFPDLDKTIAYARMMEAAGAQILTCHGRTREMKGQNTGLADWE 268 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +++V++ VP+ A+G E DG + A Sbjct: 269 YIREVKKAVKVPVFANGNILYREDVDRCMEVTGCDGVMTA 308 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 4/96 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 +FR + + A+ GA L + T G+ D ++ V + + +P Sbjct: 223 KFRIFPDLDKTIAYARMMEAAGAQILTCHGRTREMKGQNTGLADWEYIREVKKAVKVPVF 282 Query: 79 VAGGIKSLEDAAKILS-FGADKISINSPALADPTLI 113 G I ED + + G D + L++P + Sbjct: 283 ANGNILYREDVDRCMEVTGCDGVMTAEGNLSNPAIF 318 >UniRef50_A7I0T0 NifR3 family protein n=9 Tax=Epsilonproteobacteria RepID=A7I0T0_CAMHC Length = 310 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 1/90 (1%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 + V +A GAD + + T + D ++ + IP G I S Sbjct: 144 DTKNPVNIALAVQNAGADFIAMHARTRAGGYSAKPDYEAIAAAKSAVKIPLIANGNINSQ 203 Query: 87 EDAAKILSFGADKISINSPALADPTLITRL 116 + AD + I + +P + + Sbjct: 204 NANQILNLTKADALMIGRATIGNPWVFYEI 233 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 60/190 (31%), Gaps = 12/190 (6%) Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-----GADKISINSPALADPTLITRLA 117 + + +AG + + + G D I +N P ++ + A Sbjct: 52 LKMIKKSENETPYFVQIAG--SDPKIIKQAVEILNKIDGIDGIDLNCGC-PVPKVVRQNA 108 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 +Q + + K +YT + R ++ VQ GA I ++ Sbjct: 109 GSALLQNLDLLS--KLIEIIKKTSNKKYTSAKVRLGFDTKNPVNIALAVQNAGADFIAMH 166 Query: 178 MMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + G + D E + + +PLIA+G + ++ + D + Sbjct: 167 ARTRAGGYSAKPDYEAIAAAKSAVKIPLIANGNINS-QNANQILNLTKADALMIGRATIG 225 Query: 237 QIINIGELKA 246 E+K Sbjct: 226 NPWVFYEIKN 235 >UniRef50_D1AZV6 Dihydrouridine synthase DuS n=7 Tax=Campylobacteraceae RepID=D1AZV6_SULD5 Length = 312 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 2/120 (1%) Query: 32 IVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 +AK GAD + + T S VD ++ + IP G I SLE A Sbjct: 151 PELIAKACENAGADFMSMHGRTRSGAYKAEVDYQAIAEARAAVKIPVIANGDITSLEKAL 210 Query: 91 KILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 ++S G + I AL +P + +L + ++ + G Sbjct: 211 HVMSVTGCKNLMIGRGALGNPWIFYQLKNGLHHVEKTKILEIVLEHYDAMVEFYGEKGVS 270 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 10/177 (5%) Query: 78 CVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDT--WY 133 V + S+++A IL+ G I +N + ++ + +++ +D Sbjct: 71 IVGSDLTSIKEAVLILNDMEGIAGIDLNCGCP-----VPKMVAQEAGSSLLLNLDHMQRV 125 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 Y +YT + R + + GA + ++ + G D + Sbjct: 126 IETIKTYSNKRYTSAKVRLGFNTKIPELIAKACENAGADFMSMHGRTRSGAYKAEVDYQA 185 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + + R +P+IA+G ++E L + +LK L Sbjct: 186 IAEARAAVKIPVIANGDITSLEKALHVMSVTGCKNLMIGRGALGNPWIFYQLKNGLH 242 >UniRef50_B9K738 TIM-barrel protein, nifR3 family n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K738_THENN Length = 273 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 53/194 (27%), Gaps = 36/194 (18%) Query: 67 SRVAEVIDI------PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ D+ + G K++ GA L D L + Sbjct: 36 EELSRAADVLSDEYPWIDLNAG----CPVRKVVKKGAGG-----GLLRDLDLFRAVVKEL 86 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 GK+ V G +E + + G E+ ++ Sbjct: 87 ------------RKHVKGKFTVKTRLGWNENQISKIYEI------LVEEGVDEVFIHTRT 128 Query: 181 QDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 G D + L + + +P SG + E A ++ G L A + Sbjct: 129 VAQAFTGKADWKSLSVLDK--KIPTFVSGDIFSPEDAKRALEESGCHGVLVARGAIGRPW 186 Query: 240 NIGELKAYLATQGV 253 ++K +L Sbjct: 187 LFKQIKDFLERGKY 200 >UniRef50_UPI0001C41F37 tRNA-dihydrouridine synthase DusA2 n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41F37 Length = 237 Score = 60.3 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDG-RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 D + +AK + G D L A G R D + +AE +I I S+ A Sbjct: 150 DNLEIAKLAEDCGVDYLHI---DAMKMGVRDADFYLIKEIAENTNIFIIGNNSINSISQA 206 Query: 90 AKILSFGADKISINSPAL 107 K+L+ GA+ ISI A+ Sbjct: 207 EKMLNAGANGISIARAAI 224 >UniRef50_Q4PG83 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4PG83_USTMA Length = 527 Score = 60.3 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 43/89 (48%), Gaps = 3/89 (3%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNG-YDLEQLKKVREVCHV 202 + R + +T+ + + +++ GA I ++ ++ G G D +++ V+E +V Sbjct: 203 VTAKMRVYESVEKTITYARLLERAGAQIITVHGRTRNMKGHLTGLADWAKIRAVKEAVNV 262 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAA 231 P+ A+G + F +A DG ++A Sbjct: 263 PVFANGNVLYPQDFYDALAATGADGVMSA 291 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 4/96 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 + R +E + + A+ GA + + T + G + D + + V E +++P Sbjct: 206 KMRVYESVEKTITYARLLERAGAQIITVHGRTRNMKGHLTGLADWAKIRAVKEAVNVPVF 265 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 G + +D L+ GAD + L +P ++ Sbjct: 266 ANGNVLYPQDFYDALAATGADGVMSAEGNLYNPAIM 301 >UniRef50_Q2IG49 Dihydrouridine synthase TIM-barrel protein nifR3 n=4 Tax=Anaeromyxobacter RepID=Q2IG49_ANADE Length = 352 Score = 60.3 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 7/164 (4%) Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQC-IVVGIDTWYDAETGK-----YHVNQ 144 +L+ GA + D + + G +G D E + V Sbjct: 77 DVLARGAVVAVQAGAGMIDVNMACPVKKVCGSGAGAAMGRDPRKVEEAVRAIRAAVPVPV 136 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVP 203 + + +D + + GA + L+ + + +G E ++ V++ +P Sbjct: 137 TVKIRAGWDEGEVNCVDVARAAEAGGAAAVALHGRTRSQLYSGKARWELVRAVKQAVAIP 196 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 ++ SG T + + D L A ELKA Sbjct: 197 VLGSGDVWTAGDAVRMREETGCDAVLVARGACGNPWIFRELKAI 240 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 2/72 (2%) Query: 49 FYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPA 106 + T S V V + + IP +G + + DA ++ G D + + A Sbjct: 168 LHGRTRSQLYSGKARWELVRAVKQAVAIPVLGSGDVWTAGDAVRMREETGCDAVLVARGA 227 Query: 107 LADPTLITRLAD 118 +P + L Sbjct: 228 CGNPWIFRELKA 239 >UniRef50_C6A2A3 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Thermococcus sibiricus MM 739 RepID=GGGPS_THESM Length = 255 Score = 60.3 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 71/224 (31%), Gaps = 22/224 (9%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV----AGGIKSLEDA 89 LAK E G D ++ T + V V + E +P + GG+ DA Sbjct: 37 KLAKISEEVGVDAIMVGGSTGAE--GEVLDGVVKAIKENSSLPVILFPGSHGGLSKYADA 94 Query: 90 AKILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +S + +P I + F V+ + + Sbjct: 95 VFFMSLLNSR---------NPFFIAGAQALGAFRVKHYGIEPIPMAYLVVEPGETAGWVS 145 Query: 148 DESRTRVTQWE-TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 D + + + + Q G + L G E +K V+ VPLI Sbjct: 146 DANLIPRHKPKIAAAYALAGQYMGMRLVYLE--AGSGAPEHIPNEMIKVVKSAIDVPLIV 203 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 GG T E E + + D + + ++ ++ E K L + Sbjct: 204 GGGIRTYEDAKEVVQ-SGADIIVTGTAI-EKAGSLEESKKRLES 245 >UniRef50_Q96G46 tRNA-dihydrouridine synthase 3-like n=17 Tax=Coelomata RepID=DUS3L_HUMAN Length = 650 Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 14/159 (8%) Query: 18 VKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITAS-SDGRVVDKSWVSRVAEV 72 VK V LA R + G + + + ++ D ++ + Sbjct: 434 VKIRTGVQER-----VNLAHRLLPELRDWGVALVTLHGRSREQRYTKLADWQYIEECVQA 488 Query: 73 ID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD-RFGVQCIVVGID 130 +P G I S EDA + + G I I AL P L T + + R +D Sbjct: 489 ASPMPLFGNGDILSFEDANRAMQTGVTGIMIARGALLKPWLFTEIKEQRHWDISSSERLD 548 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 D Y + + D T+ L+W+ + + Sbjct: 549 ILRDFTN--YGLEHWGSDTQGVEKTRRFLLEWLSFLCRY 585 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 38/117 (32%), Gaps = 3/117 (2%) Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDL 190 V + + + E++ G + L+ +++ D Sbjct: 420 IVRGMNQVLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLHGRSREQRYTKLADW 479 Query: 191 EQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + +++ V+ +PL +G + E A + V G + A + E+K Sbjct: 480 QYIEECVQAASPMPLFGNGDILSFEDANRAMQ-TGVTGIMIARGALLKPWLFTEIKE 535 >UniRef50_B0SC53 tRNA-dihydrouridine synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SC53_LEPBA Length = 316 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 63/176 (35%), Gaps = 21/176 (11%) Query: 33 VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + AK E GA E+V + T + W++++ ++ I G I +++DA + Sbjct: 151 LDCAKALEEGGAKEIVVHARTKTDGYKPPAYWEWIAKIKSILKINVIANGEIWTVQDAIQ 210 Query: 92 ILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 G D I I A+ +P I + I + + Sbjct: 211 CQKISGCDDIMIGRGAVTNP-------------SIALLIKKKLEERMSWQKTKEVLSSYW 257 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 + E + V +++ L+ ++++ D +++K++ LI Sbjct: 258 LSMEPDVEAVSRVGRIKQW------LHYLSREYEEAQIDFQKIKRISNPKDFELIY 307 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 55/150 (36%), Gaps = 2/150 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 + ++A + S GA I IN A R + ++ ++ Sbjct: 76 RMADNAHLVASLGAYGIDINFGCPAPTVNRNRGGAALLKEPNLMYSIVKAVRNVVPENIP 135 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHV 202 T+ LD + +++ GA EIV++ + E + K++ + + Sbjct: 136 VTAKMRLGYESTEL-ALDCAKALEEGGAKEIVVHARTKTDGYKPPAYWEWIAKIKSILKI 194 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +IA+G T++ ++ + + D + Sbjct: 195 NVIANGEIWTVQDAIQCQKISGCDDIMIGR 224 >UniRef50_C6MNJ9 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Geobacter sp. M18 RepID=C6MNJ9_9DELT Length = 348 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 3/116 (2%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVS---RVAEVIDIPFCVA 80 N + D+ + + G + + F +V + DIP V Sbjct: 227 ENEQYTSDLKKMIPEFKRLGVEAVEFSGSNFIHMKYSDHNYFVESAMNLKGNTDIPVIVV 286 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 GGI++ ED +L G D ISI+ P +++P LITRL + + + Sbjct: 287 GGIRNFEDMEAVLEAGVDMISISRPLISEPDLITRLKNGQEKARCASCNKCFIVGK 342 >UniRef50_D0NZC8 tRNA-dihydrouridine synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NZC8_PHYIN Length = 379 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 63/212 (29%), Gaps = 38/212 (17%) Query: 71 EVIDIPFCVAGGIKSLEDA--------------AKILSFGADKISINSPALA-----DPT 111 + + G S+ED L+ G ++S +P Sbjct: 62 AEAPLALQLGG--NSVEDLGAAAHLSQSYGGFCEINLNTGCPSALVSSRCFGARLMLEPE 119 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + D + + + D T + V G + + +V V G Sbjct: 120 RVRDICDSM-RHSVALASEGNPDHPTAEVTVKCRIGVDDCDSYDELH--HYVAAVASAGV 176 Query: 172 GEIVLNMMNQDGVRNGYDL-----------EQLKKVRE-VCHVPLIASGGAGTMEHFLEA 219 I+++ + + G E + ++++ + +GG +++H E Sbjct: 177 RHIIVH--ARKCLLKGLSTKDNRTIPPLRYEVVYRLKQDFPELSFTLNGGVKSIQHAREL 234 Query: 220 FRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +VDG + + N + + Sbjct: 235 LNTTNVDGIMIGRAAYNTPWNFRDADRLIFNA 266 >UniRef50_A4S141 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S141_OSTLU Length = 307 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 4/87 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVV---DKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + AK GA + + T + +++ + + + +P G I+SL +A Sbjct: 155 LKYAKMVEAAGAQIVAVHGRTREQKRCADIRANWAYIRAIKDALKVPVLANGDIRSLAEA 214 Query: 90 AKILSF-GADKISINSPALADPTLITR 115 L GAD + P L++P L + Sbjct: 215 RACLEATGADGVLSAEPLLSNPALFSD 241 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 37/115 (32%), Gaps = 7/115 (6%) Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 V E V T L + + V+ GA + ++ ++ R Sbjct: 126 VEALIRKLDEELPVPVTAKIRVYDDLETT----LKYAKMVEAAGAQIVAVHGRTREQKRC 181 Query: 187 G---YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + ++ +++ VP++A+G ++ DG L+A Sbjct: 182 ADIRANWAYIRAIKDALKVPVLANGDIRSLAEARACLEATGADGVLSAEPLLSNP 236 >UniRef50_A7H1K2 tRNA-dihydrouridine synthase B n=14 Tax=Campylobacter RepID=A7H1K2_CAMJD Length = 308 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 33/89 (37%), Gaps = 2/89 (2%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + + G + ++ + + +G D E + + +P+IA+G ++ Sbjct: 148 PEKMAKICESLGVDFVSVHGRTRKQLYSGKADYESIASAKASVKIPVIANGDI-NAQNAK 206 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKA 246 E ++ DG + E+K+ Sbjct: 207 EVYKITKCDGLMIGRASVGNPWIFYEIKS 235 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 4/100 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK N + +AK G D + + T D ++ + IP Sbjct: 137 VKFRLGFNEKY---PEKMAKICESLGVDFVSVHGRTRKQLYSGKADYESIASAKASVKIP 193 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 G I + D + I ++ +P + + Sbjct: 194 VIANGDINAQNAKEVYKITKCDGLMIGRASVGNPWIFYEI 233 >UniRef50_A1VHK2 Dihydrouridine synthase, DuS n=10 Tax=Desulfovibrionaceae RepID=A1VHK2_DESVV Length = 449 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 5/112 (4%) Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-N 180 Q + V A G+ G + V D + + GAG + L+ Sbjct: 141 PQALAVARAMLRTAGAGRVGFKFRLGWDVGQEVW----ADLGRALADLGAGWVTLHPRYA 196 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + G L ++ VP+IASG T + R+ V + A Sbjct: 197 RQGFSGEARWSTLGELVRAVSVPVIASGDLFTAADGVRCLRETGVASVMYAR 248 >UniRef50_UPI0001910D6A bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI0001910D6A Length = 157 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 47/50 (94%), Positives = 48/50 (96%) Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 DGVRNGYDL QLKKVR+VC VPLIASGGAGTMEHFLEAFRDADVDGALAA Sbjct: 1 DGVRNGYDLTQLKKVRDVCRVPLIASGGAGTMEHFLEAFRDADVDGALAA 50 >UniRef50_A1RXV6 Geranylgeranylglyceryl phosphate synthase n=4 Tax=Archaea RepID=GGGPS_THEPD Length = 255 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 36/107 (33%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 + V +G V V + +A F + S G V V V Sbjct: 132 IIVGEGGAVSIVSYTRPLPFAKPEVVAAYALAAEYMGFQFVYLEGGSGGEPVPPKIVKMV 191 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 V +P V GGI+S E A ++ GAD I + + + Sbjct: 192 KGVTTLPLIVGGGIRSPEVAKELAKAGADIIVTGTIVEESENIRETI 238 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 76/234 (32%), Gaps = 31/234 (13%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVP-LAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRV 69 +R+ + + ++ +A+ AE G ++ S + V + Sbjct: 13 IREHGAIHMTLIDPEKTTPEVAARIAREVAEAGTSAIMV---GGSIGVSEAMTDEVVLAI 69 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA-LADPTLI-------TRLADRFG 121 ++P + G + LS AD + S +P I + R+G Sbjct: 70 KRSTEVPVILFPGSPT------ALSRHADAVWFLSVLNSQNPYFITGAQMQGAPIVKRYG 123 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 ++ V+ + E G + YT + E G + L Sbjct: 124 LE--VLPLGYIIVGEGGAVSIVSYTRPLPFAKPEVVAAYALAAEY--MGFQFVYL----- 174 Query: 182 DGVRNG--YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +G G + +K V+ V +PLI GG + E + A D + ++ Sbjct: 175 EGGSGGEPVPPKIVKMVKGVTTLPLIVGGGIRSPE-VAKELAKAGADIIVTGTI 227 >UniRef50_P33371 tRNA-dihydrouridine synthase C n=160 Tax=Gammaproteobacteria RepID=DUSC_ECOLI Length = 315 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 31/163 (19%) Query: 86 LEDAAKILSFGADKISINSP--------------ALADPTLITRLADRFGVQCIVVGIDT 131 E+AA+ + G+ + +N L DP LI + A Sbjct: 78 AENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLP-- 135 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR--NGYD 189 V G + + + + VQ+ GA E+V++ ++ D Sbjct: 136 --------VSVKVRLGWD-----SGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHID 182 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + + +R+ ++P+IA+G + + + D + Sbjct: 183 WQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGR 225 Score = 52.9 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSW--VSRVAEVIDIPFCVAGGIKSLEDAA 90 +A + GA ELV + T R W + + + ++IP G I + A Sbjct: 151 FEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQ 210 Query: 91 KILS-FGADKISINSPALADPTL 112 + ++ G D + I AL P L Sbjct: 211 QCMAISGCDAVMIGRGALNIPNL 233 >UniRef50_Q6M9N8 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6M9N8_PARUW Length = 297 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 55/165 (33%), Gaps = 4/165 (2%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A I G D + +N D IT+ G+ I + Sbjct: 43 AKIIEELGFDIVDLNCGCPVDK--ITKDGSGSGLLKTPELIGEIVCNMVSAVKIPVTVKI 100 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVR-EVCHVPLIA 206 + Q + + VQ V++ GA I ++ + G + E +K+ + + +I Sbjct: 101 RAGWDEQQIQVENIVQIVEQAGAQAICIHGRTRQQGYRGPANWEYIKRGKLAAKSIKIIG 160 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +G + F + D L A Q + ++ YL + Sbjct: 161 NGDVLDGPSAAKMFCETGCDAVLVARGTLGQPWIVQDILRYLEGK 205 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 36/112 (32%), Gaps = 4/112 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA-EVIDI 75 VK + + I + + + + GA + + T + ++ R I Sbjct: 98 VKIRAGWDEQQI-QVENIVQIVEQAGAQAICIHGRTRQQGYRGPANWEYIKRGKLAAKSI 156 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIV 126 G + AAK+ G D + + L P ++ + + + Sbjct: 157 KIIGNGDVLDGPSAAKMFCETGCDAVLVARGTLGQPWIVQDILRYLEGKTAI 208 >UniRef50_A1S1G3 Oxidoreductase, FAD/FMN-binding n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1G3_SHEAM Length = 368 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 6/110 (5%) Query: 18 VKGVQFRNHEIIG----DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI 73 V+ ++G + + +A A E D + F + + + +S V + Sbjct: 221 VRLSPENYANVVGIELQNQLAVANLLAAEDIDYVHFSMGDSFKLANGKNTALLSEVINAL 280 Query: 74 DIP--FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +AG I+ E A ++LS GAD ++I + AL +P I ++ + Sbjct: 281 TGKTTLMMAGNIRDGEAAERVLSAGADLVAIGTSALGNPDWIYKVTNGVP 330 >UniRef50_Q6MRF1 Transcription regulator homolog yacF n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MRF1_BDEBA Length = 337 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 40/135 (29%), Gaps = 5/135 (3%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAA-K 91 + EG + + T + D +++ V IP G I + A + Sbjct: 153 EICNIAYNEGVSWVAIHGRTRAQSYTGLADWDFIADVKANTKIPILGNGDILTPRQANLR 212 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + G D + I L +P + + + I D D + + + Sbjct: 213 LQQSGCDGVMIGRGCLKNPFIFMDALSLWRGEPI---KDVKRDYVSLFQGLQKEIVAHCD 269 Query: 152 TRVTQWETLDWVQEV 166 +T + + Sbjct: 270 EHITGIQLRKFAAWF 284 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 10/115 (8%), Positives = 31/115 (26%), Gaps = 1/115 (0%) Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE 198 + + + G + ++ + G D + + V+ Sbjct: 132 IKIPLTIKIRTGWDANSRNATEICNIAYNEGVSWVAIHGRTRAQSYTGLADWDFIADVKA 191 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +P++ +G T + + DG + K + + + + Sbjct: 192 NTKIPILGNGDILTPRQANLRLQQSGCDGVMIGRGCLKNPFIFMDALSLWRGEPI 246 >UniRef50_B3LAS6 tRNA-dihydrouridine synthase, putative n=6 Tax=Plasmodium RepID=B3LAS6_PLAKH Length = 340 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 3/85 (3%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLIASGGAGTME 214 +TL+ ++Q R I ++ ++ D E +K ++E ++P+IA+G E Sbjct: 164 KTLNLCYDLQSRNVKMITVHGRTKEEKGVNIKECDYEIIKIIKERLNIPIIANGSIEHFE 223 Query: 215 HFLEAFRDADVDGALAASVFHKQII 239 + D + A + ++ Sbjct: 224 DVQKCLNYTKADAVMCAEILLEKPY 248 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 55/183 (30%), Gaps = 9/183 (4%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVA 80 + + + L + + T G + D + + E ++IP Sbjct: 157 KIDQDYQKTLNLCYDLQSRNVKMITVHGRTKEEKGVNIKECDYEIIKIIKERLNIPIIAN 216 Query: 81 GGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 G I+ ED K L+ AD + L P + + V + D + E+ Sbjct: 217 GSIEHFEDVQKCLNYTKADAVMCAEILLEKPYFFSN-QNVHAVDIVNEYYDLFLQYESNP 275 Query: 140 YHVNQYTGDESRT----RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 ++ + + L+ + +LN GV L ++ Sbjct: 276 KYLKGHLFKMLYKYFQVHTDLRDLLNNCHSLDDYVNFRSILNERRTSGVLTESTLSWYRR 335 Query: 196 VRE 198 R+ Sbjct: 336 YRK 338 >UniRef50_B1C9Q3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9Q3_9FIRM Length = 329 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 1/95 (1%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 D ++ ++ GA I ++ ++ V G D + +KK +E VPLIA+G E Sbjct: 160 EDIIKAIEDGGADMITVHGRTREQVFTGEVDYDGIKKAKETASVPLIANGDLDNYLKAKE 219 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 DG + + + ++ + V Sbjct: 220 KMDYTGADGVMIGRGANYDPFIFSQFNECISGKKV 254 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 5/110 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK N II DI+ K + GAD + + T VD + + E +P Sbjct: 148 VKVRLGFNENIIEDII---KAIEDGGADMITVHGRTREQVFTGEVDYDGIKKAKETASVP 204 Query: 77 FCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 G + + A K+ GAD + I A DP + ++ + + + Sbjct: 205 LIANGDLDNYLKAKEKMDYTGADGVMIGRGANYDPFIFSQFNECISGKKV 254 >UniRef50_Q9VY45 CG1434 n=20 Tax=Arthropoda RepID=Q9VY45_DROME Length = 473 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 8/153 (5%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY-- 145 DA + L+ G S + + + G + D A + + Sbjct: 105 DAGRALAVGKLLQRDISGLDINMGCPKEFSIK-GGMGAALLADPDKAAHILRTLCSGLDI 163 Query: 146 -TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL-EQLKKVREVCHVP 203 + R T+D VQ++ G I ++ +D E L+ V + +P Sbjct: 164 PVTCKIRILPDVEGTIDLVQKLAATGIAAIGIHARTRDERPQHPAHPEVLRAVAQAVDIP 223 Query: 204 LIASGG---AGTMEHFLEAFRDADVDGALAASV 233 +IA+GG + + + D + A Sbjct: 224 IIANGGSKNMHCYDDLRKFQMECGADSVMVARA 256 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 33 VPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL---ED 88 + L ++ A G + + T + VA+ +DIP GG K++ +D Sbjct: 179 IDLVQKLAATGIAAIGIHARTRDERPQHPAHPEVLRAVAQAVDIPIIANGGSKNMHCYDD 238 Query: 89 AAKI-LSFGADKISINSPALADPTLIT 114 K + GAD + + A + ++ Sbjct: 239 LRKFQMECGADSVMVARAAQINVSIFR 265 >UniRef50_D1VTQ2 Probable tRNA-dihydrouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VTQ2_9FIRM Length = 310 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 19/154 (12%) Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 S + +P L+ L K + ++ LD Sbjct: 102 CGSALIKNPNLVYELVKG------------AVKNSNKKISIKTRKSFDNTLS------LD 143 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 ++ Q GA + ++ +++ D + L K+++ +PLI +G T+E L Sbjct: 144 IIRAAQDAGAFAVTVHPRSREEYYKNKSDWQYLIKIKKFLTIPLIGNGDILTVEDALYKI 203 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + DVDG + + ++K L + E Sbjct: 204 KKYDVDGIAIGRGAIENPLIFSQIKKALKGEKYE 237 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA- 90 + + + + GA + + + D ++ ++ + + IP G I ++EDA Sbjct: 142 LDIIRAAQDAGAFAVTVHPRSREEYYKNKSDWQYLIKIKKFLTIPLIGNGDILTVEDALY 201 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQC 124 KI + D I+I A+ +P + +++ + Sbjct: 202 KIKKYDVDGIAIGRGAIENPLIFSQIKKALKGEK 235 >UniRef50_C5TM05 tRNA-dihydrouridine synthase C n=5 Tax=Neisseriaceae RepID=C5TM05_NEIFL Length = 321 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 3/101 (2%) Query: 33 VPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + A GA L + T WV ++ + ++IP G + +L+D Sbjct: 151 LECASAIENGGACALTVHARTKVEGYEPPAHWEWVRKIRDAVNIPVTANGDVFNLQDYLD 210 Query: 92 ILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 I S G + + + A+ P L ++ ++ V D Sbjct: 211 IKSVSGCNSVMLGRGAVIRPDLARQI-KQYENGETVKDTDF 250 Score = 53.3 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 40/99 (40%), Gaps = 3/99 (3%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFL 217 L+ ++ GA + ++ + E ++K+R+ ++P+ A+G ++ +L Sbjct: 150 ALECASAIENGGACALTVHARTKVEGYEPPAHWEWVRKIRDAVNIPVTANGDVFNLQDYL 209 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + + + + + ++K Y G ++ Sbjct: 210 DIKSVSGCNSVMLGRGAVIRPDLARQIKQY--ENGETVK 246 >UniRef50_C1MXD1 Dihydrouridine synthase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MXD1_9CHLO Length = 424 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 38/130 (29%), Gaps = 3/130 (2%) Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + G V + + + Q+ GA + L+ + Sbjct: 155 PNDVYACVSAIRRGCEGTGCVPTLKLRSGYDDDSLLR--ENLLAAQEGGAAFVTLHPRTR 212 Query: 182 DGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G + + + E VP+I +G + E + G + + + Sbjct: 213 RQGYSGRANWKDIAIAVETLDVPVIGNGDVTSPERARALLFETGCAGIMVGRGAVQDPLV 272 Query: 241 IGELKAYLAT 250 +KA L Sbjct: 273 FRRIKAELRA 282 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 8/105 (7%) Query: 19 KGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDI 75 K D + E GA + + T + ++ E +D+ Sbjct: 179 KLRSG----YDDDSLLRENLLAAQEGGAAFVTLHPRTRRQGYSGRANWKDIAIAVETLDV 234 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADR 119 P G + S E A +L G I + A+ DP + R+ Sbjct: 235 PVIGNGDVTSPERARALLFETGCAGIMVGRGAVQDPLVFRRIKAE 279 >UniRef50_A9BJH4 Dihydroorotate dehydrogenase n=45 Tax=Bacteria RepID=PYRD_PETMO Length = 300 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 21/111 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVS 67 +IV +A+ E GAD L + ITA G + + V Sbjct: 169 AENIVEMAESCVEAGADALSLVNTFPALAIDISKKKAIFDNITAGLSGPCIKPIALRMVY 228 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 V++ +D+P GGI DA + + GA + + + +P + + Sbjct: 229 EVSKAVDVPIIGIGGIMDYRDAIEYIMAGAWAVQVGTANFINPNACAEIIE 279 >UniRef50_UPI000180C543 PREDICTED: similar to dihydrouridine synthase 1-like n=2 Tax=Eumetazoa RepID=UPI000180C543 Length = 626 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 4/89 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 V A+ G D + + T G + V + +DIP G I+ D Sbjct: 156 VKYAQMLETAGCDIITVHGRTREQKGPNTGLASWDHIKAVKDNVDIPVFANGNIQYYCDI 215 Query: 90 AKILS-FGADKISINSPALADPTLITRLA 117 + + G D + + L +P + L+ Sbjct: 216 MRCMETTGVDGVMVAEGNLTNPMIFQDLS 244 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 7/92 (7%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-----LEQLKKVREVCHVPLIASGGAGT 212 +T+ + Q ++ G I ++ ++ G + + +K V++ +P+ A+G Sbjct: 154 KTVKYAQMLETAGCDIITVHGRTREQK--GPNTGLASWDHIKAVKDNVDIPVFANGNIQY 211 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + VDG + A + +L Sbjct: 212 YCDIMRCMETTGVDGVMVAEGNLTNPMIFQDL 243 >UniRef50_A8QBG9 PP3111 protein, putative n=1 Tax=Brugia malayi RepID=A8QBG9_BRUMA Length = 513 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 + R + I + V A+ + GA L + T G D + V +D+P Sbjct: 188 KIRILQDINETVAYARALVKAGACMLTVHGRTREQRGPNTGLADWYAMRAVVSAVDVPVL 247 Query: 79 VAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 G I+ D + L GA I L++P L + Sbjct: 248 ANGNIQLPGDVDRCLEITGASAIMSAEGILSNPYLFEK 285 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 7/91 (7%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-----LKKVREVCHVPLIASGGAGT 212 ET+ + + + K GA + ++ ++ G + ++ V VP++A+G Sbjct: 197 ETVAYARALVKAGACMLTVHGRTREQ--RGPNTGLADWYAMRAVVSAVDVPVLANGNIQL 254 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGE 243 ++A + Sbjct: 255 PGDVDRCLEITGASAIMSAEGILSNPYLFEK 285 >UniRef50_B8C4H3 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C4H3_THAPS Length = 333 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 54/158 (34%), Gaps = 14/158 (8%) Query: 88 DAAKILSFGADKISINSPALADPTLITR----LADRFGVQCIVVGIDTWYDAETGKYHVN 143 A K+L D + IN + R L + IV + V Sbjct: 70 QAMKVLEPHVDGVDINCGCPQNIAKRGRYGAFLMEEDNGDKIVEIVQHLTANLNVPVSVK 129 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVC 200 ++L + + GA + ++ + + + + +++V ++ Sbjct: 130 LRILPTGI-----EDSLALYKRLVDAGAAMLTIHGRTRFQNKVDTGTANWDYIRQVVDLV 184 Query: 201 H--VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 VP+IA+G ++ + F VDG +++ + Sbjct: 185 GDRVPVIANGNICNLDEVRKCFEVTGVDGVMSSEGILE 222 Score = 53.7 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 6/93 (6%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAEVID--IPFCVAGGI 83 I D + L KR + GA L + T D + ++ +V +++ +P G I Sbjct: 137 IEDSLALYKRLVDAGAAMLTIHGRTRFQNKVDTGTANWDYIRQVVDLVGDRVPVIANGNI 196 Query: 84 KSLEDAAKILS-FGADKISINSPALADPTLITR 115 +L++ K G D + + L P L T Sbjct: 197 CNLDEVRKCFEVTGVDGVMSSEGILEYPPLFTE 229 >UniRef50_A5KQG7 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQG7_9FIRM Length = 651 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 25/131 (19%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVF---YDIT---- 53 ML RI G+ I ++ KR ++ D + +I Sbjct: 209 MLDMRI-------SGE----EHIEGGMEIDEVAEFIKRIEDK-IDMVHISCGVEIDNRTK 256 Query: 54 -----ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA-DKISINSPAL 107 + ++ V E + IP V GGI + E+A +IL G D + I + Sbjct: 257 IYMSPTAYAPHKINAKMAKLVKEKVKIPVAVVGGIMTPEEAEEILEDGCADAVVIGRQLI 316 Query: 108 ADPTLITRLAD 118 ADP + + + Sbjct: 317 ADPWWVKKAWE 327 Score = 41.4 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 19/57 (33%) Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + + K V+E +P+ GG T E E D D + + + Sbjct: 269 INAKMAKLVKEKVKIPVAVVGGIMTPEEAEEILEDGCADAVVIGRQLIADPWWVKKA 325 >UniRef50_Q5ZRM0 Nitrogen regulation protein n=6 Tax=Legionella RepID=Q5ZRM0_LEGPH Length = 329 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 58/165 (35%), Gaps = 14/165 (8%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E AAK+ S GAD I IN + G ++ A + Sbjct: 90 AEAAAKLQSLGADLIDINCGCPKSK------IRKKGAGSALLEDPQKLIAIISRVRAAIS 143 Query: 146 TG-DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCHVP 203 + L ++++ GA ++++ + + +Q+ ++ ++P Sbjct: 144 IPLTIKIRIQNNEKDLTLAKQIEDAGAHALIVHGRRWTEDYDIPCNWQQIANIKNAVNIP 203 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASV------FHKQIINIG 242 +I +G + +A + DG + + ++ ++N+ Sbjct: 204 VIVNGDINNIFSLRKALEISACDGFMISRAGTGKPWLYRDLLNLE 248 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 2/88 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + LAK+ + GA L+ + + D + ++ + ++IP V G I ++ K Sbjct: 159 LTLAKQIEDAGAHALIVHGRRWTEDYDIPCNWQQIANIKNAVNIPVIVNGDINNIFSLRK 218 Query: 92 ILS-FGADKISINSPALADPTLITRLAD 118 L D I+ P L L + Sbjct: 219 ALEISACDGFMISRAGTGKPWLYRDLLN 246 >UniRef50_C6XJQ7 Dihydrouridine synthase DuS n=2 Tax=Hyphomonadaceae RepID=C6XJQ7_HIRBI Length = 337 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 58/167 (34%), Gaps = 3/167 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A S GAD I IN + + ++ + + + A G Sbjct: 81 YEAARISASAGADIIDINMGCPSRQVTGGQSGAAL-MRDLDLARELIIAAREGGGLPVSV 139 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 T + ++ I ++ + G D ++K+V+ ++PL Sbjct: 140 KMRLGWDDDT-LNAPALAKICEEEHVKLITVHGRTRCQFYTGKADWNKVKEVKLASNLPL 198 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 I +G + + +A + DG + + +G++ + LA + Sbjct: 199 IVNGDIDSSKTAKQAILLSQADGVMIGRAALGRPWLLGKIASDLANR 245 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 3/103 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + + + LAK EE + + T D + V V ++P Sbjct: 139 VKMRLGWDDDTLNAP-ALAKICEEEHVKLITVHGRTRCQFYTGKADWNKVKEVKLASNLP 197 Query: 77 FCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRLAD 118 V G I S + A + L AD + I AL P L+ ++A Sbjct: 198 LIVNGDIDSSKTAKQAILLSQADGVMIGRAALGRPWLLGKIAS 240 >UniRef50_C0W327 Dihydrouridine synthase n=2 Tax=Actinomyces RepID=C0W327_9ACTO Length = 438 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 1/111 (0%) Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV 199 V LD + Q G + L+ G D + +++E Sbjct: 197 EVPVTVKMRIGVDEEHETYLDAARAAQDAGVAALALHGRTARQHYAGKADWSAIARLKEA 256 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 C +P++ +G T H LE R DG + + ++ L+ Sbjct: 257 CRIPVLGNGDTWTGSHALEMMRQTGCDGVVVGRGCQGRPWLFADIVHALSG 307 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 2/93 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + A+ + G L + TA D S ++R+ E IP G + A + Sbjct: 216 LDAARAAQDAGVAALALHGRTARQHYAGKADWSAIARLKEACRIPVLGNGDTWTGSHALE 275 Query: 92 ILS-FGADKISINSPALADPTLITRLADRFGVQ 123 ++ G D + + P L + Sbjct: 276 MMRQTGCDGVVVGRGCQGRPWLFADIVHALSGS 308 >UniRef50_D2VPF2 Predicted protein n=2 Tax=Naegleria gruberi RepID=D2VPF2_NAEGR Length = 450 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVRE-VCHVPLIASGGAGTMEH 215 +++V+ V GA + ++ ++ D ++ +RE +P+IA+G T + Sbjct: 247 MNYVKTVVDAGAQVLCVHGRTREQKGANQNYADWTVIRAIREQFPQIPMIANGNIRTFQD 306 Query: 216 FLEAFRDADVDGALAASVFHKQI 238 + VD ++ + Sbjct: 307 VQDCLEYTRVDAVMSGEGLLENP 329 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 5/85 (5%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVD---KSWVSRVAEVID-IPFCVAGGIKSLEDA 89 K + GA L + T G + + + + E IP G I++ +D Sbjct: 248 NYVKTVVDAGAQVLCVHGRTREQKGANQNYADWTVIRAIREQFPQIPMIANGNIRTFQDV 307 Query: 90 AKILSFG-ADKISINSPALADPTLI 113 L + D + L +P L Sbjct: 308 QDCLEYTRVDAVMSGEGLLENPALF 332 >UniRef50_C4KIS5 Geranylgeranylglyceryl phosphate synthase n=13 Tax=Sulfolobaceae RepID=GGGPS_SULIK Length = 255 Score = 58.3 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 46/128 (35%), Gaps = 7/128 (5%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQ-FRNHEIIGDIVPLAKRYAEE----GADELVFYDITAS 55 ML +IP V G + I D LA Y G D + + + Sbjct: 130 MLQIEVIPTAYVIVGHGGTAAHIGKARVIPYDNFELATAYTLAAEYLGMDFVYLEAGSGA 189 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + +S + + IP + GGI+S+E A K++ GA+ I + D + Sbjct: 190 --PEPIRPEMISFIKKASSIPLIIGGGIRSVEVALKLVEAGANIIVTGNIIERDVDKAIK 247 Query: 116 LADRFGVQ 123 + + Sbjct: 248 IIRGIKNK 255 >UniRef50_C5CI99 Dihydrouridine synthase DuS n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI99_KOSOT Length = 314 Score = 58.3 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 72/219 (32%), Gaps = 16/219 (7%) Query: 41 EEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV-AGGIKSLEDAAKILSFGADK 99 E GAD + + S +G + + ++ + I L AAK + A Sbjct: 25 EWGADFVFSEML--SVEGVLRNDRTTQKIIPETPCRIQLFGNDIARLAMAAKAVLDKATW 82 Query: 100 ISINSPALADPTLITRLADRF--GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 IN+ + + + I T V G + Sbjct: 83 FDINAGCPVKKVVKRGAGAALLREPEKLNAMIQTLKGISDLPVSVKIRLGWDKN------ 136 Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVC---HVPLIASGGAGTM 213 E + V+ + + I+++ +G D E + KV ++C + + SG + Sbjct: 137 EVVKIVERLVESRPFAIMVHGRTVVQGYSGVADWESIGKVVKICKPHGIKVYGSGDVFSP 196 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 E +EAF VDG L A + K L +G Sbjct: 197 EKIVEAFEKYGVDGVLVARGAIGNPWIFSQYKE-LKQKG 234 >UniRef50_Q090Q9 TRNA-dihydrouridine synthase B n=2 Tax=Cystobacterineae RepID=Q090Q9_STIAU Length = 369 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 26/101 (25%), Gaps = 2/101 (1%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREV-CHVP 203 S L E+ G + ++ +D +G+ D + ++ Sbjct: 172 CKIRSGWDAHHRNYLQMAGELFSAGCAALAIHPRTRDQGYSGFADWSVIADLKRHFPDRT 231 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 LI +G T D + EL Sbjct: 232 LIGNGDVKTPADARRMRETTGCDFVMIGRGALGNPWIFREL 272 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 3/88 (3%) Query: 33 VPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAA 90 + +A G L + T D S ++ + D G +K+ DA Sbjct: 186 LQMAGELFSAGCAALAIHPRTRDQGYSGFADWSVIADLKRHFPDRTLIGNGDVKTPADAR 245 Query: 91 KILSF-GADKISINSPALADPTLITRLA 117 ++ G D + I AL +P + LA Sbjct: 246 RMRETTGCDFVMIGRGALGNPWIFRELA 273 >UniRef50_A2GL21 Oxidoreductase, FAD/FMN-binding family protein n=3 Tax=Trichomonas vaginalis RepID=A2GL21_TRIVA Length = 368 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 1/96 (1%) Query: 31 DIVPLAKRY-AEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 D+V ++ + + G F I + + + DIP V GG + L+D Sbjct: 254 DMVEVSCGFQNDAGCRTPSFKGINGIRFKPGYNLDEALELRKFSDIPIAVVGGFRKLKDM 313 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + + G IS+ P++ + ++ L + G +CI Sbjct: 314 EEAVKKGIQLISLGRPSICELHIVKHLIEGHGSKCI 349 >UniRef50_Q9VPM1 CG3645, isoform A n=9 Tax=Diptera RepID=Q9VPM1_DROME Length = 505 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 4/92 (4%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFCVAGGI 83 E + + AK G L + T G + + +++ V + I IP G I Sbjct: 161 EDLEKTIRYAKMLEAAGCQLLTVHGRTREQKGPLTGVANWNYIKNVRQHIKIPMLANGNI 220 Query: 84 KSLEDAAKIL-SFGADKISINSPALADPTLIT 114 +L+D + L G D + L +P + Sbjct: 221 LALDDVHRCLTETGVDGVMSAEGNLHNPAIFK 252 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGV--RNGY-DLEQLKKVREVCHVPLIASGGAGTM 213 +T+ + + ++ G + ++ ++ G + +K VR+ +P++A+G + Sbjct: 164 EKTIRYAKMLEAAGCQLLTVHGRTREQKGPLTGVANWNYIKNVRQHIKIPMLANGNILAL 223 Query: 214 EHFLEAFRDADVDGALAA 231 + + VDG ++A Sbjct: 224 DDVHRCLTETGVDGVMSA 241 >UniRef50_A7S213 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S213_NEMVE Length = 570 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 68/219 (31%), Gaps = 11/219 (5%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKIL 93 + + GAD T G+ + + V R + + G ++ A++L Sbjct: 235 RICKQYGADITCGEMAMCTNLLQGQQSEWALVKRHSSEDIFGVQLCGAFPDTMTKCAELL 294 Query: 94 --SFGADKISINSPALADPTLITRLADRF--GVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 D I IN+ D + + V G Sbjct: 295 QKETDVDFIDINTGCPIDLVFNKGAGSALMERKGKLQQIVQGMKSVIDIPLTVKIRAGIH 354 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVRE-VCHVPLIAS 207 + W V ++ G + ++ +++ D + + +V + +P+ + Sbjct: 355 DKKYT--WNAHKLVGNLRDWGTDMVTIHGRSREQRYTKSADWDYISEVAKLASPMPVFGN 412 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G + E ++ + A V G + A + E+K Sbjct: 413 GDILSFEDAMQHRKQAGVAGVMIARGAIIKPWIFTEIKE 451 >UniRef50_UPI00006A5AE6 PREDICTED: similar to PP3111 protein n=1 Tax=Ciona intestinalis RepID=UPI00006A5AE6 Length = 474 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 11/104 (10%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGV--RNG-YDLEQLKKVREVCHVPLIASGGAGTM 213 +T+ + + +++ G + ++ ++ G E +K V++ +P+ A+G Sbjct: 155 EKTVQYAKMIERAGCQLLTVHGRTKEMKGPMTGLASWEHIKAVKDAVKIPVFANGNIQYK 214 Query: 214 EHFLEAFRDADVDGALAASV-FHK-------QIINIGELKAYLA 249 VDG + A H + I YL Sbjct: 215 ADVDRCINQTGVDGVMIAEGNLHDPCLFVGKKTIIWEIALEYLQ 258 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 4/91 (4%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGI 83 + V AK G L + T G + + V + + IP G I Sbjct: 152 TDVEKTVQYAKMIERAGCQLLTVHGRTKEMKGPMTGLASWEHIKAVKDAVKIPVFANGNI 211 Query: 84 KSLEDAAKILS-FGADKISINSPALADPTLI 113 + D + ++ G D + I L DP L Sbjct: 212 QYKADVDRCINQTGVDGVMIAEGNLHDPCLF 242 >UniRef50_Q4SBU2 Inosine-5'-monophosphate dehydrogenase (Fragment) n=2 Tax=Clupeocephala RepID=Q4SBU2_TETNG Length = 571 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 66/201 (32%), Gaps = 16/201 (7%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA 97 + G D + +S V S ++ + + V G + + A ++ G Sbjct: 265 LLVQAGVD---VVVLDSSQGNSVFQISMINYIKQKYADLQVVGGNVVTAAQAKNLIDAGV 321 Query: 98 D--KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 D ++ + ++ + G + K ++ + + + VT Sbjct: 322 DALRVGMGCGSIC--------ITQEGNHPCCLLDLGINPHVCQKELLSVMSAQPASSVVT 373 Query: 156 QWETLDWVQEVQKRGAG-EIV-LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 + A I+ LN + G G + ++ + VP+IA GG T+ Sbjct: 374 GPPLGHCYSAIFALAAPPHILDLNHVMACGRPQGTSVYKVAEYARRFSVPVIADGGIQTV 433 Query: 214 EHFLEAFRDADVDGALAASVF 234 H ++A + S+ Sbjct: 434 GHVVKAL-SLGASTVMMGSLL 453 >UniRef50_C7LQM9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibrionales RepID=C7LQM9_DESBD Length = 324 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 25/168 (14%) Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + R+ + F + G K++ G+ + L +P + ++A Sbjct: 84 IERLRKAGFRYFDLNCG----CPVRKVIKTGS-----GAALLKEPENLLKIAKS------ 128 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGV 184 AE G G V L ++++ GAG + ++ G Sbjct: 129 -----MIDAAEPGCMGFKIRLGWYVGQPV----YLQVATKLEELGAGWVTMHPRFGAQGF 179 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 D LK ++E +P+IASG E ++ VD + A Sbjct: 180 TGHADWSHLKTLKERVTLPVIASGDLFHAEDAIKCIEQTSVDSIMFAR 227 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Query: 28 IIGDIV--PLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPFCVAGGIK 84 +G V +A + E GA + + + D S + + E + +P +G + Sbjct: 147 YVGQPVYLQVATKLEELGAGWVTMHPRFGAQGFTGHADWSHLKTLKERVTLPVIASGDLF 206 Query: 85 SLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 EDA K + D I AL DP++ TR Sbjct: 207 HAEDAIKCIEQTSVDSIMFARGALNDPSIFTRYLQ 241 >UniRef50_Q47C15 Dihydrouridine synthase, DuS n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C15_DECAR Length = 319 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 + A+ G +EL+ + T S W+ +V + I IP G + ++ Sbjct: 147 DTSRAIDCAQALEAAGINELIVHGRTRSDGYRPPARWEWIDKVRDAIHIPLIANGEVWTV 206 Query: 87 EDAAKI-LSFGADKISINSPALADPTLITRL 116 ED L+ G I + A+ADP L R+ Sbjct: 207 EDFRNCQLATGCADIMVGRGAVADPLLARRV 237 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 2/148 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+A ++++ + +N A R + ++ T H+ Sbjct: 79 AENARRLVALNPAGVDLNFGCPAPTVFRHRGGSALLGEPELLNEITSAVRSVVPAHIPFT 138 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 T +D Q ++ G E++++ + E + KVR+ H+PL Sbjct: 139 AKMRLGIDDTS-RAIDCAQALEAAGINELIVHGRTRSDGYRPPARWEWIDKVRDAIHIPL 197 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAAS 232 IA+G T+E F + Sbjct: 198 IANGEVWTVEDFRNCQLATGCADIMVGR 225 >UniRef50_Q4DCG2 Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi RepID=Q4DCG2_TRYCR Length = 529 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 41/141 (29%), Gaps = 7/141 (4%) Query: 39 YAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-- 95 Y GAD + + + ++ + ++ A +P G I S ED Sbjct: 322 YEGWGADAVTIHGRFRAQRYTKLANWEYIDSCAARTSLPVIGNGDIFSYEDIIDHRERYP 381 Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 I AL P + + + I Y ++ + DE T Sbjct: 382 HVSSYMIGRGALIKPWIFEEIKQEQP-RDISSQERFEMLRSFCNYGLSHWGSDERGVLTT 440 Query: 156 QWETLDWVQ---EVQKRGAGE 173 + +W+ G E Sbjct: 441 RRFLCEWLSFLCRYVPLGLLE 461 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 30/95 (31%), Gaps = 2/95 (2%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 + + + + + GA + ++ + + E + +P+I +G + Sbjct: 310 NSSASLHEKIGDYEGWGADAVTIHGRFRAQRYTKLANWEYIDSCAARTSLPVIGNGDIFS 369 Query: 213 MEHFLEAFR-DADVDGALAASVFHKQIINIGELKA 246 E ++ V + + E+K Sbjct: 370 YEDIIDHRERYPHVSSYMIGRGALIKPWIFEEIKQ 404 >UniRef50_A3HVC3 PcrB-like protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVC3_9SPHI Length = 259 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 S + V + +++ I P + GGI S E + GAD + + + DP + Sbjct: 183 GSGAQKPVSSQVIETLSKAISCPLIIGGGIDSQEKVREAYEAGADLVVLGNSIEKDPDFL 242 Query: 114 TRLAD 118 + + Sbjct: 243 AEVLN 247 >UniRef50_Q9XVN8 Protein F36A2.2, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XVN8_CAEEL Length = 527 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 36/100 (36%), Gaps = 5/100 (5%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCH--VPLIASGGAGTME 214 +++ + + GA + ++ +D D +++ V E VP++A+G Sbjct: 212 VEYAKRLVDAGATMLTVHGRTRDMKGAETGLADWSRIRDVVEAVGSRVPVMANGNIQFPG 271 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + ++A + + A++ T + Sbjct: 272 DVERCMQATGAVAIMSAEGLLYNPLIFDDANAHVDTWKIA 311 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 34/102 (33%), Gaps = 6/102 (5%) Query: 33 VPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVID--IPFCVAGGIKSLE 87 V AKR + GA L + T G + D S + V E + +P G I+ Sbjct: 212 VEYAKRLVDAGATMLTVHGRTRDMKGAETGLADWSRIRDVVEAVGSRVPVMANGNIQFPG 271 Query: 88 DAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVG 128 D + + GA I L +P + I Sbjct: 272 DVERCMQATGAVAIMSAEGLLYNPLIFDDANAHVDTWKIAAE 313 >UniRef50_B8HZU1 Photosystem I assembly BtpA n=5 Tax=Clostridiales RepID=B8HZU1_CLOCE Length = 262 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 31/248 (12%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVF---------YDITASSDGRVVDKSWVSRVAEVI 73 +I V A + G D ++ ++ + S + VA+ + Sbjct: 29 GDMKKITDQAVKEAITLEKSGMDAIIIENMGDNVFGVNMDIEQSCALAAISAI--VAQNV 86 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +IP + + + A I GAD + I + + + Sbjct: 87 NIPIGIDAAMNDYKTALSIAKAIGADFVRIP-VFVDTVEFFGGIIQ--PCAREAMKFRKN 143 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD--L 190 +AE K + D + + GA I++ G G + + Sbjct: 144 IEAENVKIFADIQVKHTHMVLPH-VSIEDSAKAAEACGADAIIVT-----GTHIGVETPI 197 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ-----IINIGELK 245 + +K+V++V +P+IA G T + E DGA+ S + I++ Sbjct: 198 DIIKRVKKVISIPVIAGSGVKT-NNIKEQLGI--ADGAIVGSSLKEGGNIKNPISLELCT 254 Query: 246 AYLATQGV 253 + + Sbjct: 255 ELIKALNI 262 >UniRef50_C5F231 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=C5F231_9HELI Length = 317 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 3/88 (3%) Query: 32 IVPLAKRYAEEGADELVFYDITASS--DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + +A + D +V + T S +D + + + I P G I S + A Sbjct: 151 PLEIANALNDSPIDYVVVHGRTKSDGYKKDKIDYDSIRLIKQNIQHPLIANGEITSPQIA 210 Query: 90 AKILS-FGADKISINSPALADPTLITRL 116 K+ GA+ + I A+ P + T++ Sbjct: 211 KKVQELTGAEGVMIGRAAIEKPWIFTQI 238 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 33/94 (35%), Gaps = 2/94 (2%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREVCHVPLIASGGAGTMEHF 216 L+ + +V++ + D + ++ +++ PLIA+G + + Sbjct: 151 PLEIANALNDSPIDYVVVHGRTKSDGYKKDKIDYDSIRLIKQNIQHPLIANGEITSPQIA 210 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + +G + ++ ++K L Sbjct: 211 KKVQELTGAEGVMIGRAAIEKPWIFTQIKNNLEE 244 >UniRef50_A4A9J1 2-nitropropane dioxygenase, NPD n=1 Tax=Congregibacter litoralis KT71 RepID=A4A9J1_9GAMM Length = 345 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 52/152 (34%), Gaps = 15/152 (9%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + D SI A P LA G + +V + + G + + Sbjct: 93 EYQIDPTSIPEGAGRVPFSSETLALIAGFEPPIVSFHFGLPDRGSIDGIKSWGG-QIWSS 151 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----------DLEQLKKVREVCHVP 203 T T D + + GA I+ + G R + + L+ ++ +P Sbjct: 152 AT---TADEARWLMDHGADAIIAQGIEAGGHRGMFLTRDLGSQLGTMTLLEAIQRATTLP 208 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +IA+GG T E EA DA A + + Sbjct: 209 VIAAGGLSTPEQAREAL-DAGAWAVQAGTAYL 239 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 10/87 (11%) Query: 33 VPLAKRYAEEGADELVFYD----------ITASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 A+ + GAD ++ +T ++ + + + +P AGG Sbjct: 155 ADEARWLMDHGADAIIAQGIEAGGHRGMFLTRDLGSQLGTMTLLEAIQRATTLPVIAAGG 214 Query: 83 IKSLEDAAKILSFGADKISINSPALAD 109 + + E A + L GA + + L Sbjct: 215 LSTPEQAREALDAGAWAVQAGTAYLCC 241 >UniRef50_Q73RG6 Dihydrouridine synthase, putative n=1 Tax=Treponema denticola RepID=Q73RG6_TREDE Length = 337 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 37/121 (30%), Gaps = 3/121 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIP 76 VK ++ K EG D + + T R + +R+A + +P Sbjct: 144 VKLRLGEEENY-DRLLSFCKMLVSEGVDLITLHPRTQKQKYSRPCKHEYTARLASDLSVP 202 Query: 77 FCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I SLE K + I A+ P + L+ D + Sbjct: 203 VYGNGDINSLETLEKIASKYPCAGWMIGRAAVQKPWIFYELSKGILKNGTAEDKDEKIEI 262 Query: 136 E 136 + Sbjct: 263 D 263 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 55/192 (28%), Gaps = 11/192 (5%) Query: 67 SRVAEVIDIPFCVAG-GI--KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 A + + G GI A +I++ GA + P +L++++ Sbjct: 69 KSAAACVPLLLQYGGFGIDLNMGCCAPQIVNTGAGFAWMKKPLSETASLVSKVKK----- 123 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 V + A + L + + + G I L+ Q Sbjct: 124 --AVLLYDEQKAGPQTEPIRLSVKLRLGEEENYDRLLSFCKMLVSEGVDLITLHPRTQKQ 181 Query: 184 VRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + E ++ VP+ +G ++E + G + ++ Sbjct: 182 KYSRPCKHEYTARLASDLSVPVYGNGDINSLETLEKIASKYPCAGWMIGRAAVQKPWIFY 241 Query: 243 ELKAYLATQGVE 254 EL + G Sbjct: 242 ELSKGILKNGTA 253 >UniRef50_B7XJM7 tRNA-dihydrouridine synthase 1 n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XJM7_ENTBH Length = 309 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 35/81 (43%), Gaps = 3/81 (3%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--GY-DLEQLKKVREVCHVPLIASGGA 210 + +T+ + + ++K G + ++ ++ GY + ++ V+ +P++++GG Sbjct: 129 ESIEKTITYAKMIEKSGCSLLAVHGRTREQKGQNTGYVSFDHIRAVKNALSIPVVSNGGV 188 Query: 211 GTMEHFLEAFRDADVDGALAA 231 T A DG + Sbjct: 189 LTHRDIKNAVEITGCDGIMIG 209 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 4/88 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + AK + G L + T G+ V + V + IP GG+ + D Sbjct: 135 ITYAKMIEKSGCSLLAVHGRTREQKGQNTGYVSFDHIRAVKNALSIPVVSNGGVLTHRDI 194 Query: 90 AKILS-FGADKISINSPALADPTLITRL 116 + G D I I P L P++ + Sbjct: 195 KNAVEITGCDGIMIGEPILFIPSIFVDI 222 >UniRef50_A6QPA8 DUS4L protein n=2 Tax=Eutheria RepID=A6QPA8_BOVIN Length = 238 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 25/60 (41%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 V L ++ G + + T + V + + E + IP G I+SL++A + Sbjct: 169 VDLCRKAEATGVSWITVHGRTVEERHQPVHYEAIKIIKESMSIPIVANGDIRSLKEAENV 228 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 10/160 (6%) Query: 74 DIPFCV---AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV---QCIVV 127 D P V A + L DAA+I+ A+ I IN L A+ +G + Sbjct: 81 DCPLIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWAL----AEGYGACLINKPEL 136 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 D + + R T+D ++ + G I ++ + Sbjct: 137 VRDMVKQVRNQVENPRFSVSIKIRIHDDLTRTVDLCRKAEATGVSWITVHGRTVEERHQP 196 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 E +K ++E +P++A+G +++ + DG Sbjct: 197 VHYEAIKIIKESMSIPIVANGDIRSLKEAENVWHTTGTDG 236 >UniRef50_UPI0001BCB21D enoyl-[acyl-carrier-protein] reductase n=1 Tax=Fusobacterium periodonticum ATCC 33693 RepID=UPI0001BCB21D Length = 331 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 2/116 (1%) Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 CI G+ + + T+ + ++K GA +++ M Sbjct: 96 NVCIEEGVQVITTGAGNPGAFMDKLKAANIKVIPVIPTVKLAERMEKIGADAVIVEGMES 155 Query: 182 DGV-RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 G + L ++ +P+IA+GG + + FL A D ++F Sbjct: 156 GGHIGTLTTMALLPQIVNAVSIPVIAAGGIASGKQFLAAL-SMGADAVQCGTIFLT 210 Score = 50.6 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Query: 33 VPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V LA+R + GAD ++ + + G + + + ++ + IP AGGI S + Sbjct: 134 VKLAERMEKIGADAVIVEGMESGGHIGTLTTMALLPQIVNAVSIPVIAAGGIASGKQFLA 193 Query: 92 ILSFGADKISINSPALADPTLI 113 LS GAD + + L I Sbjct: 194 ALSMGADAVQCGTIFLTAKECI 215 >UniRef50_Q0VMM0 2-nitropropane dioxygenase, putative n=2 Tax=Gammaproteobacteria RepID=Q0VMM0_ALCBS Length = 333 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 8/155 (5%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 I+ +A + ++ G +++ A L+ ++A C+ + +D + + Sbjct: 58 IRQEVEALRAINDGPFAVNLIPAATERRLLMDQVA-----TCLALQVDAFVFFWDVDTGL 112 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREVC 200 QY E + + Q Q GA +++ G G L L +V Sbjct: 113 VQYLKQEGKQVIYQVGNQRDADLAQSAGADVLIVQGHEAGGHVRGTTATLSLLPQVVANS 172 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 VP++ASGG + L AF G S F Sbjct: 173 DVPVVASGGIASGGAMLAAF-SMGAQGVSLGSAFL 206 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 5/101 (4%) Query: 11 DVRDGQVVKGVQ-FRNHEI-IGDIVPLAKRYAEEGADELVF--YDITASSDGRVVDKSWV 66 DV G V Q + +G+ A GAD L+ ++ G S + Sbjct: 107 DVDTGLVQYLKQEGKQVIYQVGNQRD-ADLAQSAGADVLIVQGHEAGGHVRGTTATLSLL 165 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 +V D+P +GGI S S GA +S+ S L Sbjct: 166 PQVVANSDVPVVASGGIASGGAMLAAFSMGAQGVSLGSAFL 206 >UniRef50_Q54CU9 tRNA-dihydrouridine synthase 3-like n=1 Tax=Dictyostelium discoideum RepID=DUS3L_DICDI Length = 671 Score = 56.8 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 5/126 (3%) Query: 41 EEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-AD 98 E GA + + + + R+ + +V + +EV IP G I + +D I Sbjct: 475 EWGACAVTLHGRSRAQRYSRLANWDYVKQCSEVSSIPLIGNGDIYNYQDVVNIYDSSKVS 534 Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGI-DTWYDAETGKYHVNQYTGDESRTRVTQW 157 I I AL P + T + ++ D D Y ++ + D T+ Sbjct: 535 SIMIARGALIKPWIFTEIKEKREWDISASERLDFIRDFAN--YGLDHWGSDRIGVDNTRK 592 Query: 158 ETLDWV 163 L+W+ Sbjct: 593 FLLNWL 598 Score = 53.7 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 52/173 (30%), Gaps = 13/173 (7%) Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD---- 134 V +K E AD + INS D L G ++ + Sbjct: 390 VDAAVKCAEFIEN--EIDADFVDINSGCPID------LVCNMGAGAALMERPKKVEQLLR 441 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 + + + + GA + L+ ++ + + + + Sbjct: 442 GISSSLSCPTTIKIRIGKSEDAPTAHKLIPSLGEWGACAVTLHGRSRAQRYSRLANWDYV 501 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 K+ EV +PLI +G + + + + V + A + E+K Sbjct: 502 KQCSEVSSIPLIGNGDIYNYQDVVNIYDSSKVSSIMIARGALIKPWIFTEIKE 554 >UniRef50_Q91XI1 tRNA-dihydrouridine synthase 3-like n=12 Tax=Chordata RepID=DUS3L_MOUSE Length = 637 Score = 56.8 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 14/159 (8%) Query: 18 VKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITAS-SDGRVVDKSWVSRVAE- 71 VK V LA R + G + + + R+ D ++ + A+ Sbjct: 421 VKMRTGVQER-----VSLAHRLLPELRDWGVALVTLHGRSREQRYTRLADWPYIEQCAKV 475 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD-RFGVQCIVVGID 130 +P G I S EDA + G I + AL P L T + + R +D Sbjct: 476 ASPMPLFGNGDILSFEDANCAMQTGVAGIMVARGALLKPWLFTEIKEQRHWDISSSERLD 535 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 D Y + + D T+ L+W+ + + Sbjct: 536 ILRDFT--HYGLEHWGSDTQGVERTRRFLLEWLSFLCRY 572 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 37/122 (30%), Gaps = 3/122 (2%) Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 G V + + + E++ G + L+ +++ Sbjct: 402 AKFQQIVRGVNGVLDVPLTVKMRTGVQERVSLAHRLLPELRDWGVALVTLHGRSREQRYT 461 Query: 187 G-YDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 D +++ + +PL +G + E A + V G + A + E+ Sbjct: 462 RLADWPYIEQCAKVASPMPLFGNGDILSFEDANCAMQ-TGVAGIMVARGALLKPWLFTEI 520 Query: 245 KA 246 K Sbjct: 521 KE 522 >UniRef50_A5FJK8 Geranylgeranylglyceryl phosphate synthase n=7 Tax=Bacteroidetes RepID=A5FJK8_FLAJ1 Length = 243 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 2/82 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + A+ G+ + + + + V +S +++ ++IP V GGI L K Sbjct: 163 LATAQAGEMLGSKLIYLEAGSGAK--KPVPLEMISVISQNVEIPIIVGGGIVDLHGIKKA 220 Query: 93 LSFGADKISINSPALADPTLIT 114 + GAD + I + D Sbjct: 221 YNAGADLVVIGTAFENDSHFFD 242 Score = 41.4 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 57/175 (32%), Gaps = 11/175 (6%) Query: 64 SWVSRVAEVIDIPFCVAGG----IKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 ++++ + +P + G I DA LS + + + + + Sbjct: 67 DLIAQLKQKTRLPVVIFPGDPSQISPKADAILFLSLLSGRN--PDYLIEYQVQAAPILKK 124 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 V+ + V + + E R L Q + G+ I L Sbjct: 125 --TNLEVISTGYILIESGNETAVARVSKTEPLNRENFDLALATAQAGEMLGSKLIYLE-- 180 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 G + LE + + + +P+I GG + H ++ +A D + + F Sbjct: 181 AGSGAKKPVPLEMISVISQNVEIPIIVGGGIVDL-HGIKKAYNAGADLVVIGTAF 234 >UniRef50_B3PD21 Dihydrouridine synthase family protein n=4 Tax=Proteobacteria RepID=B3PD21_CELJU Length = 321 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 6/97 (6%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGG 82 + + A+ GADEL + + + +++ + + IP G Sbjct: 146 DRTSYMEN----AQAVEAAGADELTVHARSKADGYKPPAYWHYIADIKAALKIPVIANGE 201 Query: 83 IKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 I S+ED + + + L+ P L ++ Sbjct: 202 IWSVEDYLRCREQSQCADVMLGRGLLSCPDLARQIKA 238 Score = 54.1 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 2/167 (1%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +A +++ +GA I +N A V + + Sbjct: 80 NAQELVRYGAKAIDLNFGCPAKTVNSHEGGACLLRTPDRVYSIIKAVRDAVPRAIPVSAK 139 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ-DGVRNGYDLEQLKKVREVCHVPLIA 206 ++ Q V+ GA E+ ++ ++ DG + + ++ +P+IA Sbjct: 140 IRLGFEDR-TSYMENAQAVEAAGADELTVHARSKADGYKPPAYWHYIADIKAALKIPVIA 198 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +G ++E +L + + ++KAYLA + Sbjct: 199 NGEIWSVEDYLRCREQSQCADVMLGRGLLSCPDLARQIKAYLAGEEY 245 >UniRef50_C6SB16 tRNA-dihydrouridine synthase B n=1 Tax=Neisseria meningitidis alpha153 RepID=C6SB16_NEIME Length = 207 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 34/110 (30%), Gaps = 8/110 (7%) Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREV 199 V + D V + + G + ++ + + G E + + + Sbjct: 11 PVWGWHDDHQNLPV-------IAKIAEDCGIAALAVHGRTRTQMYKGEARYELIAETKCR 63 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 ++P+ +G + + + DG + + +LK Y Sbjct: 64 LNIPVWVNGDITSPQKAQAVLKQTAADGIMIGRGAQGRPWFFRDLKHYAE 113 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 2/84 (2%) Query: 35 LAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 +AK + G L + T + + ++ ++IP V G I S + A +L Sbjct: 25 IAKIAEDCGIAALAVHGRTRTQMYKGEARYELIAETKCRLNIPVWVNGDITSPQKAQAVL 84 Query: 94 S-FGADKISINSPALADPTLITRL 116 AD I I A P L Sbjct: 85 KQTAADGIMIGRGAQGRPWFFRDL 108 >UniRef50_C5LIP5 Ornithine decarboxylase n=4 Tax=Perkinsus marinus ATCC 50983 RepID=C5LIP5_9ALVE Length = 720 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 20/141 (14%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 A + S L +P L+ R+ ++ V + Sbjct: 404 ARRGHYGSFLLEEPELVLRIVEKM------------VKGIKCPVSVKIRLMTAKDDDGSG 451 Query: 157 WETL----DWVQEVQKRGAGEIVLNMMNQDGVRNGYD---LEQLKKVREVC-HVPLIASG 208 + ++V+ + G I L+ ++ + +VR +P I +G Sbjct: 452 RPDVAATKEFVKRLDSLGVDLIALHPRTKEWKGQLTQACWWQAAAEVRACVPDIPFIVNG 511 Query: 209 GAGTMEHFLEAFRDADVDGAL 229 G E + F D + Sbjct: 512 GISCFEDVEKCFEVTKCDAVM 532 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 5/86 (5%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVD---KSWVSRVAEVI-DIPFCVAGGIKSLEDA 89 KR G D + + T G++ + V + DIPF V GGI ED Sbjct: 460 EFVKRLDSLGVDLIALHPRTKEWKGQLTQACWWQAAAEVRACVPDIPFIVNGGISCFEDV 519 Query: 90 AKILS-FGADKISINSPALADPTLIT 114 K D + + L PTL Sbjct: 520 EKCFEVTKCDAVMSSECILEVPTLFR 545 >UniRef50_Q1N033 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N033_9GAMM Length = 321 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 18/164 (10%), Positives = 53/164 (32%), Gaps = 17/164 (10%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPFCVAGGI---KSLED 88 + A+ G ++ + T R + + + + +P G I + E Sbjct: 151 LANAQAMESAGVRDICIHARTKVQGYRPPAHWHQIKNIKQQVKVPIIANGEIWNRRDYEA 210 Query: 89 AAKILSFGADKISINSPALADPTLITRL-------ADRFGVQCIVVGIDTWYDAETGKYH 141 + + + A+ADP L + + ++ +D + Y Sbjct: 211 CKAA--SHCEHVMLGRGAVADPELAATIKGCESSDTWIHRLHDLIWMLDELVEFGGQSYA 268 Query: 142 ---VNQYTGDESRTRVTQWETLDWVQEVQKRGA-GEIVLNMMNQ 181 + Q+ + + ++ +++ A +L+ +++ Sbjct: 269 HGRIKQWFSFLKMSYEQAVPLFESLKTMKEASAIRRFLLDEISR 312 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 45/151 (29%), Gaps = 8/151 (5%) Query: 86 LEDAAKILSFGADKISIN---SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 E+A + GA ++IN + +F Q + HV Sbjct: 78 AENACRAAELGAPVVNINFGCPSRFVNGRCGGAYLLQFPDQIHTILESVRKALPE---HV 134 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCH 201 + L Q ++ G +I ++ + Q+K +++ Sbjct: 135 PLTAKMRLGFKDDAL-ALANAQAMESAGVRDICIHARTKVQGYRPPAHWHQIKNIKQQVK 193 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 VP+IA+G + + + + Sbjct: 194 VPIIANGEIWNRRDYEACKAASHCEHVMLGR 224 >UniRef50_Q9NX74 tRNA-dihydrouridine synthase 2-like n=35 Tax=Metazoa RepID=DUS2L_HUMAN Length = 493 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 45/155 (29%), Gaps = 24/155 (15%) Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 + + L+DP I ++ + +TL Sbjct: 126 MGAALLSDPDKIEKILSTL------------VKGTRRPVTCKIRI------LPSLEDTLS 167 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGG----AGTMEHF 216 V+ +++ G I ++ ++ E +K + + +P+IA+GG Sbjct: 168 LVKRIERTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDI 227 Query: 217 LEAFRDADVDGALAASVFHKQI-INIGELKAYLAT 250 + + + A I + E L Sbjct: 228 EDFRQATAASSVMVARAAMWNPSIFLKEGLRPLEE 262 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 6/93 (6%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGG----I 83 + D + L KR G + + V + +A+ + IP GG I Sbjct: 162 LEDTLSLVKRIERTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHI 221 Query: 84 KSLEDAAKILSF-GADKISINSPALADPTLITR 115 + D A + + A+ +P++ + Sbjct: 222 QQYSDIEDFRQATAASSVMVARAAMWNPSIFLK 254 >UniRef50_C1DY86 Dihydrouridine synthase-like family protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DY86_9CHLO Length = 495 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 9/103 (8%), Positives = 34/103 (33%), Gaps = 3/103 (2%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPL 204 ++ + V+ GA ++++ ++ + + + +++ +P+ Sbjct: 239 VKIRLGAGGSEAPARQLAEAVENAGAAAVIIHGRTKEQRYTRAANWDLIGEIQRERGIPV 298 Query: 205 IASGGA-GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + +G EH + + A+ + E+ Sbjct: 299 VGNGDILTHYEH-RDRLARSGAHAAMTGRGALIKPWIFKEVAE 340 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 2/88 (2%) Query: 35 LAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-LEDAAKI 92 LA+ GA ++ + T R + + + IP G I + E ++ Sbjct: 255 LAEAVENAGAAAVIIHGRTKEQRYTRAANWDLIGEIQRERGIPVVGNGDILTHYEHRDRL 314 Query: 93 LSFGADKISINSPALADPTLITRLADRF 120 GA AL P + +A+ Sbjct: 315 ARSGAHAAMTGRGALIKPWIFKEVAEGV 342 >UniRef50_B6BT49 tRNA-dihydrouridine synthase A n=4 Tax=SAR11 cluster RepID=B6BT49_9RICK Length = 334 Score = 56.4 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 22/200 (11%), Positives = 60/200 (30%), Gaps = 17/200 (8%) Query: 71 EVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 E + V G K E A G D+I+IN + + ++ + Sbjct: 61 EEKPLALQVGGSNKDELAEVAKIAEDMGYDEININLGC-PSKKVQKNMFGACLMKEPDLV 119 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLD-WVQEVQKRGAGEIVLNMMNQDGVRNG 187 + + ++ L+ ++ +++ G +L+ Sbjct: 120 AECINSMVNSCNIPVTAKTRIGFDQTEDFDYLNNFIHKMRDAGTKTFILHARKAMLTGLS 179 Query: 188 Y---------DLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + + ++++ + +I +GG + + DG + ++ Sbjct: 180 PKQNLNIPKLNYNMVYEIKKKNPELEIIINGGISKVSEIDNHLKF--CDGVMIGRSIYQN 237 Query: 238 IINIGEL-KAYLATQGVEIR 256 ++ E+ + T R Sbjct: 238 PYSLIEIERDIFNTHNNPTR 257 >UniRef50_Q9VJ06 CG10495 n=12 Tax=Drosophila RepID=Q9VJ06_DROME Length = 396 Score = 56.4 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 44/152 (28%), Gaps = 17/152 (11%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCI--------VVGIDTWYDAETGKYHVNQYTGD 148 D I +N +A +G + VV V Sbjct: 103 VDGIDLNCGCPQSWA----MAKGYGCGMLRQPELVHQVVQEVRRTLPGDFSVSVKMRL-- 156 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREVCHVPLIA 206 + T+D ++++ G + L+ + D+ + +VR+ +PLI Sbjct: 157 -LGGEESLQRTIDLARQLESAGVTFLTLHGRTPAQKHSKDTLDIPAMSQVRQSLQIPLIV 215 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +G + + G +AA Sbjct: 216 NGNVESYRDACDMHEQTGAAGVMAARGLLANP 247 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 3/99 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW--VSRVAEVIDI 75 VK E + + LA++ G L + T + +S+V + + I Sbjct: 152 VKMRLLGGEESLQRTIDLARQLESAGVTFLTLHGRTPAQKHSKDTLDIPAMSQVRQSLQI 211 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLI 113 P V G ++S DA + GA + LA+P L Sbjct: 212 PLIVNGNVESYRDACDMHEQTGAAGVMAARGLLANPALF 250 >UniRef50_Q6MM64 Inosine-5-monophosphate dehydrogenase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MM64_BDEBA Length = 346 Score = 56.4 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 65/207 (31%), Gaps = 24/207 (11%) Query: 61 VDKSWVSRVAEVIDIPFCVAGGI--------KSLEDAAKILSFGADKISINSPALADPTL 112 + V+ + GI + A ++ G K+ S + + Sbjct: 53 ANMDMVTEYDMAFAMNQLGGMGILHRFLDIEEQAAQARRLKENGV-KVISGSVGVGE-EF 110 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE---SRTRVTQWETLDWVQEVQKR 169 TR ++ ID + ++ D+ T D +++ + Sbjct: 111 KTRAKALVEAGVNIITIDIAHGHSVQMMETMKWLKDQYPQVDLIAGNLATPDAARDLIEA 170 Query: 170 GAGEI--------VLNM--MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 GA I + + GV + ++ E VP+IA GG T ++A Sbjct: 171 GADAIKVGIGPGSMCTTRIITGCGVPQLTAIGLCAEIGESYGVPVIADGGIRTSGDMVKA 230 Query: 220 FRDADVDGALAASVFHKQIINIGELKA 246 F A + S+ I GE+K Sbjct: 231 F-AAGASTVMLGSMLSGTIETPGEIKN 256 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 57/200 (28%), Gaps = 26/200 (13%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIV-----------PLAKRYAEEGADELVF---- 49 II +D+ G V+ ++ A+ E GAD + Sbjct: 123 NII-TIDIAHGHSVQMMETMKWLKDQYPQVDLIAGNLATPDAARDLIEAGADAIKVGIGP 181 Query: 50 --YDITASSDGRV-VDKSWV---SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISIN 103 T G + + + + E +P GGI++ D K + GA + + Sbjct: 182 GSMCTTRIITGCGVPQLTAIGLCAEIGESYGVPVIADGGIRTSGDMVKAFAAGASTVMLG 241 Query: 104 ---SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL 160 S + P I ++ D+W + + + L Sbjct: 242 SMLSGTIETPGEIKNGKKQYRGMASRSAQDSWRGGVPEGMAPEGESTQVTVKGHVKDVIL 301 Query: 161 DWVQEVQKRGAGEIVLNMMN 180 + ++ G I + Sbjct: 302 EVTGGIRS-GMSYINATSIA 320 >UniRef50_B9YRZ8 Indole-3-glycerol-phosphate synthase n=3 Tax=Nostocaceae RepID=B9YRZ8_ANAAZ Length = 291 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 69/232 (29%), Gaps = 40/232 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +AK Y GA + G + + I +P I Sbjct: 84 DPLAMAKSYERGGATCISVVTDQKFFQGG---FDHLRTIRHRIALPLLCKDFILDPCQIY 140 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 S GAD + + + L D + V Y G + Sbjct: 141 LARSAGADAVLLIAAILTDQEI------------------------NNFLRVIHYLGMNA 176 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV-------REVCHVP 203 V LD + +++ I +N + + +L +++ + + Sbjct: 177 ILEVHNLTELDRLLKLED--VRIISINNRSLEDFS--VNLSTTQQLMAARRSHLQNLGIL 232 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +++ G T +H DA V+ L +Q N+ E L V + Sbjct: 233 VVSESGIETSDHLS-LMADAGVNAVLMGDSLLQQE-NLEEAVRSLIKPNVPV 282 >UniRef50_Q884C6 tRNA-dihydrouridine synthase C n=13 Tax=Proteobacteria RepID=DUSC_PSESM Length = 317 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 2/96 (2%) Query: 33 VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + A+ A+ GA ++V + T W++R+ EV+ +P G I ++ED + Sbjct: 151 LDCARALADGGAAQIVVHARTKVDGYKPPAHWEWIARIQEVVKVPVVANGEIWTVEDWRR 210 Query: 92 ILSF-GADKISINSPALADPTLITRLADRFGVQCIV 126 GA I I +A P L ++A + +V Sbjct: 211 CREICGARDIMIGRGLVARPDLARQIAAAQKGEEVV 246 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 57/169 (33%), Gaps = 23/169 (13%) Query: 93 LSFGADKISINSP-----ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 L+FG ++N L +P L+ + + + G Sbjct: 94 LNFGCPAKTVNRSRGGAILLKEPELLHTIVSQVR----------RAVPKDIPVTAKMRLG 143 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIA 206 E+ LD + + GA +IV++ + E + +++EV VP++A Sbjct: 144 YENTD-----GALDCARALADGGAAQIVVHARTKVDGYKPPAHWEWIARIQEVVKVPVVA 198 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +G T+E + + + ++ A +G E+ Sbjct: 199 NGEIWTVEDWRRCREICGARDIMIGRGLVARPDLARQI--AAAQKGEEV 245 >UniRef50_C5CIM1 N-acylglucosamine-6-phosphate 2-epimerase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM1_KOSOT Length = 239 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 43/241 (17%), Positives = 80/241 (33%), Gaps = 57/241 (23%) Query: 12 VRDGQVVKGVQFRNHEIIGD--IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 ++ G +V F + GD +V +A GA + R + ++ Sbjct: 9 LKSGLIVSCQAFEGEPLYGDGIMVRMANAAVIGGAKAI-----------RTNGVKDIKQI 57 Query: 70 AEVIDIPFCVAGGIK------------SLEDAAKILSFGADKISINSPALADPTLITRLA 117 E +D+P G IK + ++A ++L GAD ++++ P + + Sbjct: 58 KEALDVPVI--GIIKKHIEGYSVYITPTSKEALEVLEAGADIVALDCTKRPRPEPLKDIF 115 Query: 118 DR----FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + + I+ I T DAE V+Q + Sbjct: 116 ENIRSNYPNALIMADIATVEDAE----------------FVSQLSPDFLATTLSG----- 154 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++ + D+E +K + E +P+IA G LEA + A S Sbjct: 155 --YTKETRNRPK--PDIELVKILAERFSIPVIAEGNYWEPSQVLEAMK-AGAFAVTIGSA 209 Query: 234 F 234 Sbjct: 210 I 210 >UniRef50_A4S604 Predicted protein (Fragment) n=2 Tax=Mamiellales RepID=A4S604_OSTLU Length = 287 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 47/154 (30%), Gaps = 4/154 (2%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 FGAD + +N T L + ++ + + V Sbjct: 84 EFGADFVDLNCGCPIHETWKRGLGAALLKKP--AKLERLVEGIASRIDVPLTVKIRLGID 141 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGT 212 + + ++ GA +V++ ++ D + ++ + ++P+I +G T Sbjct: 142 SSSQ-ARRIAEGLENAGASAVVVHGRTKEQRYTKAADYDVIRDIVRERNIPIIGNGDVLT 200 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + V + + E + Sbjct: 201 WYDARDRMEHSGVAAMMVGRGALIKPWIFKEYRE 234 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 2/87 (2%) Query: 35 LAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 +A+ GA +V + T + D + + +IP G + + DA + Sbjct: 149 IAEGLENAGASAVVVHGRTKEQRYTKAADYDVIRDIVRERNIPIIGNGDVLTWYDARDRM 208 Query: 94 S-FGADKISINSPALADPTLITRLADR 119 G + + AL P + +R Sbjct: 209 EHSGVAAMMVGRGALIKPWIFKEYRER 235 >UniRef50_B7FXL2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FXL2_PHATR Length = 233 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 59/188 (31%), Gaps = 16/188 (8%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 G D+ ++++ G ++++ A + D I IN + Sbjct: 49 QYGPPQDRPLIAQIC---------GGDVQAVVACALAMQPYCDGIDINCGCPQNIAKRGN 99 Query: 116 LADRFGVQCIVVGI--DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 Q V+ T + V + + +L ++ G Sbjct: 100 YGAFLLEQEDVLLPLVHTLLQHLSVPLSVKVRLLPAETRQASLEASLRLYTKLVDAGVHL 159 Query: 174 IVLNMMNQD--GVRNGY-DLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGA 228 + ++ + G G D + ++ V + +P+ A+GG ++ DG Sbjct: 160 LTIHGRTRHHKGPLTGAADWDAIRVVVDRLGQRIPIFANGGVASLRDAQACLATTHADGV 219 Query: 229 LAASVFHK 236 +++ + Sbjct: 220 MSSEALLE 227 >UniRef50_B8P5W1 Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P5W1_POSPM Length = 513 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 3/89 (3%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNG-YDLEQLKKVREVCHV 202 + R T +T+++ + +++ GA + + ++ G G D E+++ V+E + Sbjct: 163 VTAKFRVFPTVEKTVEYAKMLERAGAQILTCHGRLREQRGHNTGLADWEKIRAVKEAVSI 222 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAA 231 P+ A+G D ++A Sbjct: 223 PVFANGNVLFHSDIERCLAATGADAIMSA 251 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 4/96 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 +FR + V AK GA L + G D + V E + IP Sbjct: 166 KFRVFPTVEKTVEYAKMLERAGAQILTCHGRLREQRGHNTGLADWEKIRAVKEAVSIPVF 225 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 G + D + L+ GAD I L +P + Sbjct: 226 ANGNVLFHSDIERCLAATGADAIMSAEGNLYNPAIF 261 >UniRef50_D2RA64 TIM-barrel protein, nifR3 family n=5 Tax=Actinobacteridae RepID=D2RA64_GARVA Length = 384 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 12/126 (9%), Positives = 34/126 (26%), Gaps = 1/126 (0%) Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-D 189 + + + Q+ G + L+ G+ D Sbjct: 135 HRVVSVCEPAGIPVTAKFRVGIDENHETFIQAGHIAQEEGCAAVTLHARTTAEYYGGHSD 194 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +++ ++ E +P+ +G E L F++ G + +++ Sbjct: 195 WQRIGELVETLDIPVFGNGDIWGAEDALAMFKETGCAGVAIGRGCQGRPWLFADIRNACE 254 Query: 250 TQGVEI 255 + Sbjct: 255 GSDNRV 260 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 2/87 (2%) Query: 40 AEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGA 97 EEG + + T + G D + + E +DIP G I EDA + G Sbjct: 171 QEEGCAAVTLHARTTAEYYGGHSDWQRIGELVETLDIPVFGNGDIWGAEDALAMFKETGC 230 Query: 98 DKISINSPALADPTLITRLADRFGVQC 124 ++I P L + + Sbjct: 231 AGVAIGRGCQGRPWLFADIRNACEGSD 257 >UniRef50_B8C9N7 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C9N7_THAPS Length = 389 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 5/89 (5%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHV----PLIASG 208 + +T+ + ++++ G I ++ N++ +G D E K+ V P+I +G Sbjct: 172 DSVEDTIAFARKLRNAGIDYIAIHCRNREAKHDGAADWEAGAKLVSSLSVGDALPVIVNG 231 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQ 237 G + + G + A+ + + Sbjct: 232 GISCYTDAEFVTKQTNCHGVMVATGYLQN 260 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDI----PFCVAGGI 83 + D + A++ G D + + + D +++ + + P V GGI Sbjct: 174 VEDTIAFARKLRNAGIDYIAIHCRNREAKHDGAADWEAGAKLVSSLSVGDALPVIVNGGI 233 Query: 84 KSLEDAAKILS-FGADKISINSPALAD 109 DA + + + + L + Sbjct: 234 SCYTDAEFVTKQTNCHGVMVATGYLQN 260 >UniRef50_D1N0Y1 Dihydrouridine synthase DuS n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0Y1_9BACT Length = 334 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 8/129 (6%) Query: 25 NHEIIGDI---VPLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVID-IPFCV 79 D + LAK AE GA + + I + V+ + V E + + Sbjct: 138 RIVDAEDPAPTLALAKGLAELGAQAITVHGRIKEAFYSGPVNFGMIRAVREALPGVQVIA 197 Query: 80 AGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLA--DRFGVQCIVVGIDTWYDAE 136 GG+ +I G + + A+ +P L L+ D + I + Sbjct: 198 NGGVTGRVKYQEIRRETGCSLVMLARGAMGNPWLFNELSLGDAYVPPDIDEWFGVIREHV 257 Query: 137 TGKYHVNQY 145 G + Sbjct: 258 EGMIELYGE 266 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 63/202 (31%), Gaps = 12/202 (5%) Query: 50 YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG----IKSLEDAAKILSFGADKISINSP 105 D+ + + R + R E + + G I+ D F ++ P Sbjct: 39 VDVASLTYARERSAGMLRRGPEEEFLGVQLVGADHEFIRRAADVVNEYEFSVVDFNLGCP 98 Query: 106 ALADPTLITRLA-DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 P + + A G AE ++ V TL + Sbjct: 99 V---PKVAKKGAGAELGRHLDAALACFAIIAERSRHPVTAKIRIVDAEDPA--PTLALAK 153 Query: 165 EVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRD 222 + + GA I ++ ++ +G + ++ VRE V +IA+GG + E R+ Sbjct: 154 GLAELGAQAITVHGRIKEAFYSGPVNFGMIRAVREALPGVQVIANGGVTGRVKYQEIRRE 213 Query: 223 ADVDGALAASVFHKQIINIGEL 244 + A EL Sbjct: 214 TGCSLVMLARGAMGNPWLFNEL 235 >UniRef50_Q1J2A4 Dihydrouridine synthase, DuS n=3 Tax=Deinococcus RepID=Q1J2A4_DEIGD Length = 333 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Query: 47 LVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 + + T+ D ++RVA + +P +G +KS E A L+ G + I Sbjct: 170 ITVHGRTSVQRYSGEADWDAIARVAASVKVPVVGSGDVKSAEQARARLNTGVAAVMIGRG 229 Query: 106 ALADPTLITRLAD 118 A+ +P L LA Sbjct: 230 AVGNPWLFRALAS 242 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 22/72 (30%), Gaps = 2/72 (2%) Query: 174 IVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 I ++ +G D + + +V VP++ SG + E + V + Sbjct: 170 ITVHGRTSVQRYSGEADWDAIARVAASVKVPVVGSGDVKSAEQARARL-NTGVAAVMIGR 228 Query: 233 VFHKQIINIGEL 244 L Sbjct: 229 GAVGNPWLFRAL 240 >UniRef50_Q9V1G3 Indole-3-glycerol phosphate synthase n=11 Tax=Euryarchaeota RepID=TRPC_PYRAB Length = 229 Score = 55.6 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 70/226 (30%), Gaps = 40/226 (17%) Query: 31 DIVPLAKRYAEEGADEL-VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 D + + +RY GA + D R + + R+ + ++P I + E+ Sbjct: 37 DPLEILRRYERAGAVGISYITD---PKYFRG-NFDFFKRLCKETELPVLRKDFITTKEEI 92 Query: 90 AKILSFGADKISINSPALAD--PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 K G + + + L D P + G+ +V + E K + + Sbjct: 93 EKTAEAGGSAVLLITRLLKDKLPEFVDHA-REHGLDTLVEV----HTLEELKIAIQTNST 147 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV-CHVPLIA 206 + + + +G ++ K+ + + Sbjct: 148 MIGINNR-----------------------DIGKLELDDG-NVSLTAKLAPLIPDKFVKV 183 Query: 207 S-GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 S G T+E A + D AL + K LK+++ + Sbjct: 184 SESGITTLEDLKVALKY--ADAALIGTALMKTEDPEKLLKSFVEAK 227 >UniRef50_Q6AJZ5 tRNA-dihydrouridine synthase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJZ5_DESPS Length = 328 Score = 55.6 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 40/117 (34%), Gaps = 2/117 (1%) Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + D + + T+ +++ ++ GA + ++ + + Sbjct: 121 LAYDVIRSVVDNT-DIPVTVKFRAGVSSTELNGVEFGLMTERAGAAAVAVHGRTRAQAFS 179 Query: 187 GY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G D +K+V+E +P+I +G + + L+ + DG + Sbjct: 180 GVADRGIIKEVKEALSIPVIGNGDILSYQDGLDMMAETGCDGVMVGRGALGNPWVFQ 236 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 2/65 (3%) Query: 52 ITASSDGRVV-DKSWVSRVAEVIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALAD 109 T + V D+ + V E + IP G I S +D + G D + + AL + Sbjct: 172 RTRAQAFSGVADRGIIKEVKEALSIPVIGNGDILSYQDGLDMMAETGCDGVMVGRGALGN 231 Query: 110 PTLIT 114 P + Sbjct: 232 PWVFQ 236 >UniRef50_UPI0001C3129C dihydrouridine synthase DuS n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3129C Length = 333 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Query: 18 VKGVQFRNHEIIGDIVPLA-KRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDI 75 VK + + LA + A+ G L + AS D R+ E + + Sbjct: 153 VKLRPGLRPGDR-NGIELAYRLVADAGIAGLCIHPRHASQQHSGRPDYELAKRLVEELPV 211 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA 117 P ++GG++S E ++ GA+ + + +L +P L ++ Sbjct: 212 PVLISGGLRSAELVREVFEFTGAEAVLLARGSLGNPWLFEQVL 254 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 41/144 (28%), Gaps = 16/144 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 + + DP L +A + V G R Sbjct: 126 GAALVKDPDLAVEIAR------------AAAEGSGLPVTVKLRPGLRPGDRNGIELAYRL 173 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 V G + ++ + +G D E K++ E VP++ SGG + E E F Sbjct: 174 ---VADAGIAGLCIHPRHASQQHSGRPDYELAKRLVEELPVPVLISGGLRSAELVREVFE 230 Query: 222 DADVDGALAASVFHKQIINIGELK 245 + L A ++ Sbjct: 231 FTGAEAVLLARGSLGNPWLFEQVL 254 >UniRef50_Q127F8 Dihydrouridine synthase, DuS n=7 Tax=Proteobacteria RepID=Q127F8_POLSJ Length = 344 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 2/90 (2%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGI 83 + V A AE GA ELV + T + ++ + + IP G I Sbjct: 149 GYNDDSRAVECALAIAEGGAGELVVHARTKAQAYKPPAYWERIADIRAAVQIPVVANGEI 208 Query: 84 KSLEDAAKILSF-GADKISINSPALADPTL 112 +++DA + G + I A+ADP L Sbjct: 209 WTVDDARRCREASGCSMLMIGRGAVADPGL 238 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 50/152 (32%), Gaps = 10/152 (6%) Query: 86 LEDAAKILSFGADKISIN---SPALADPTLITRLADRFGVQCIVVGIDTWYDAETG-KYH 141 E+AA++ + G I +N A+ + + + + G Sbjct: 84 AENAARLATLGPAGIDLNFGCPAAVVNRHGGGASLLKEPETLLAIVSAVRRAVPAGMPVS 143 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVC 200 G + ++ + + GAGE+V++ + E++ +R Sbjct: 144 AKMRLGYNDDS-----RAVECALAIAEGGAGELVVHARTKAQAYKPPAYWERIADIRAAV 198 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +P++A+G T++ + + Sbjct: 199 QIPVVANGEIWTVDDARRCREASGCSMLMIGR 230 >UniRef50_B2KES4 Dihydrouridine synthase DuS n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KES4_ELUMP Length = 318 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 1/88 (1%) Query: 34 PLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 +AK EGA ++ + A G D +++V + IP GGI + A K+ Sbjct: 160 KIAKLAENEGAAAVIMHARYAGNVHGGPADLEALAKVVSAVKIPVIGNGGIVDVNTADKM 219 Query: 93 LSFGADKISINSPALADPTLITRLADRF 120 G I + A+ + + + + Sbjct: 220 FETGVRGIMVGRGAIGNINIFKSIINGC 247 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 2/102 (1%) Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DL 190 +A + ++ + + GA ++++ V G DL Sbjct: 131 IVNAAVNSVSIPVTLKTRIGLTAGDFKGDKIAKLAENEGAAAVIMHARYAGNVHGGPADL 190 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 E L KV +P+I +GG + + F + V G + Sbjct: 191 EALAKVVSAVKIPVIGNGGIVDVNTADKMF-ETGVRGIMVGR 231 >UniRef50_C6W0Z1 Geranylgeranylglyceryl phosphate synthase n=2 Tax=Flexibacteraceae RepID=C6W0Z1_DYAFD Length = 257 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 29/71 (40%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 S V ++ V +D P V GGI S E A L GAD I + + A+P L+ Sbjct: 181 GSGAQFPVPAETIAAVRGTVDTPIIVGGGIDSYEKADNALRAGADVIVVGNGIEANPELL 240 Query: 114 TRLADRFGVQC 124 +A Sbjct: 241 PEVAACVRAHN 251 >UniRef50_D1AI07 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=Bacteria RepID=D1AI07_SEBTE Length = 374 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 5/95 (5%) Query: 29 IGDIVPLAKRYAEEGADELVF--YDITA-SSDGRVVDKSWVSRVAEVID--IPFCVAGGI 83 I D + L + + D + DI A S G DKS V + + ++ IP GGI Sbjct: 241 IEDTLVLVENLISKELDYIHISLQDIHAKPSMGSGYDKSMVEMIIDKVNGRIPVIAVGGI 300 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + ++A KI+ GAD I++ + +P + + + Sbjct: 301 HTPDEALKIVEDGADMIALGRELIMEPDWVKKAEE 335 Score = 44.8 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 46/125 (36%), Gaps = 15/125 (12%) Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + R+A+ +G + +V ++ + R T + + + + Sbjct: 209 DKVKRVAEEYGKKDFIV---------GYRFSPEEIETPGIRIEDTLVLVENLISK--ELD 257 Query: 171 AGEIVLNMMNQDG-VRNGYDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDG 227 I L ++ + +GYD ++ + + + +P+IA GG T + L+ D D Sbjct: 258 YIHISLQDIHAKPSMGSGYDKSMVEMIIDKVNGRIPVIAVGGIHTPDEALKIVED-GADM 316 Query: 228 ALAAS 232 Sbjct: 317 IALGR 321 >UniRef50_D2QXV2 Dihydrouridine synthase DuS n=4 Tax=Planctomycetaceae RepID=D2QXV2_9PLAN Length = 354 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 49/176 (27%), Gaps = 15/176 (8%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT-----WYDAETGKYHVN 143 A ++ G D I IN + ++ R + D + H+ Sbjct: 90 ALRLAEAGFDVIDINFGCP-----VKKVLGRCRGGFHLSQPDVALEIVRRTRDIVPAHIP 144 Query: 144 QYTGDESRTRVTQWE---TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREV 199 TQ + + G I ++ G L +V+ Sbjct: 145 VTVKMRRGLDDTQLSRDRFFEILDGAFAAGVAAITVHGRTVVQRYVGPSRWSFLTEVKRH 204 Query: 200 CHVPLI-ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +I SG + + L R+ VDG A + +A A + + Sbjct: 205 VGSRVILGSGDLFSAQDCLAMMRETGVDGVTVARGAIGNPWIFSQCRALDAGEPLP 260 Score = 41.4 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 38/103 (36%), Gaps = 5/103 (4%) Query: 18 VKGVQF-RNHEIIGD-IVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVID 74 VK + + ++ D + G + + T S+++ V + Sbjct: 147 VKMRRGLDDTQLSRDRFFEILDGAFAAGVAAITVHGRTVVQRYVGPSRWSFLTEVKRHVG 206 Query: 75 IPFCVA-GGIKSLEDAAKIL-SFGADKISINSPALADPTLITR 115 + G + S +D ++ G D +++ A+ +P + ++ Sbjct: 207 SRVILGSGDLFSAQDCLAMMRETGVDGVTVARGAIGNPWIFSQ 249 >UniRef50_Q82KQ8 Putative oxidoreductase n=1 Tax=Streptomyces avermitilis RepID=Q82KQ8_STRAW Length = 755 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 8/111 (7%) Query: 24 RNHEIIGDIVPLAKRYAEEGADEL------VFYDITASSDGRVVDKSWVSRVAEVIDIPF 77 D V +A+ +A GAD + V D + GR + R+ +P Sbjct: 617 EGGTTAEDAVEIARAFAAHGADAIDVSTGQVVAD-EQPAYGRSYQTPYADRIRGEAGVPV 675 Query: 78 CVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVV 127 G I S +D ++ G D ++ P L DP A G V Sbjct: 676 IAVGAISSWDDVNSLILAGRTDLCALARPHLYDPHWTLHAAAEQGYTGPGV 726 >UniRef50_A8J786 Imidazole glycerol phosphate synthase (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J786_CHLRE Length = 322 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 31/124 (25%) Query: 95 FGADKISINSPALA-------------DPTLITRLADRFGVQCIVVGIDTWYD------- 134 GADK+SI S A+ T I +++ +G Q +V+ ID Sbjct: 117 SGADKVSIGSDAVDAAQAYYARGAQADGSTAIEQISAVYGKQAVVISIDPRRVYVSDPAA 176 Query: 135 -----------AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 G+ + + ++ + V+ GAGEI+LN ++ DG Sbjct: 177 VPHATVQTSRPGPAGEQYCWWQCTVKGGREGRDLGAVELARAVEALGAGEILLNCIDNDG 236 Query: 184 VRNG 187 V + Sbjct: 237 VGHH 240 >UniRef50_A7EMF2 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A7EMF2_SCLS1 Length = 342 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 55/172 (31%), Gaps = 10/172 (5%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAE 71 +G+ V+ R H + D V K + G D + + S+ V+ + + Sbjct: 156 YEGKKTVSVKIRIHRDLRDTVDFIKTVQDAGVDFITIHGRMRSTPSSHPVNLEAIKLLNT 215 Query: 72 VIDIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLIT-------RLADRFGVQ 123 +P G I SL A + L++P L D F + Sbjct: 216 HTTVPTVSNGDITSLRSAHEHTQQTSVSGVMSARGLLSNPALFAGYVSTPWECVDVF-LN 274 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 C+V + + GD + + ++ ++ R E++ Sbjct: 275 CVVRQPIPFKLVVHHLSEMCGSVGDGGNAGKSLLNKEERMRLMECRDMIEVI 326 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 12/143 (8%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 A SI + + L+ + + GK V+ R T Sbjct: 124 ACACSIGAALMHKRELVAEMVKE-------AKSALKREGYEGKKTVSVKIRIHRDLRDT- 175 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEH 215 +D+++ VQ G I ++ + + +LE +K + VP +++G ++ Sbjct: 176 ---VDFIKTVQDAGVDFITIHGRMRSTPSSHPVNLEAIKLLNTHTTVPTVSNGDITSLRS 232 Query: 216 FLEAFRDADVDGALAASVFHKQI 238 E + V G ++A Sbjct: 233 AHEHTQQTSVSGVMSARGLLSNP 255 >UniRef50_C7NTV9 Dihydropyrimidine dehydrogenase n=10 Tax=Halobacteriaceae RepID=C7NTV9_HALUD Length = 262 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 9/97 (9%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 V+ R D++ +A+R GAD + A V+ + D+ Sbjct: 155 SVKVRTEIDGVDLLAVARRIEAAGADAVHV---DAMDSEG-----VVAEIVAATDLFVIA 206 Query: 80 AGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 G++ E + L+ GAD +S+ P P ++ R+ Sbjct: 207 NNGVRDRETVREYLACGADAVSVGRP-SDRPAVLKRV 242 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 51/168 (30%), Gaps = 13/168 (7%) Query: 67 SRVAEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 ++ + D P ++S E +I AD +I + + + Sbjct: 75 EQLNRLADEPLVAGLNVRSASREPLERIAESCADHGAICELNAHCRQ--DEMCETGAGEA 132 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 ++ D + RT + + L + ++ GA + ++ M+ +G Sbjct: 133 LLAEPDRLAKQVETAADAGATVSVKVRTEIDGVDLLAVARRIEAAGADAVHVDAMDSEG- 191 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + ++ + +IA+ G E E D Sbjct: 192 -------VVAEIVAATDLFVIANNGVRDRETVREYL-ACGADAVSVGR 231 >UniRef50_Q7X346 Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X346_9BACT Length = 355 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 2/92 (2%) Query: 33 VPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + A+ + GA L + T + D ++R+ + +P G + + A Sbjct: 140 LQQAQAAVDGGAAALFVHGRTRNARYRFAADWDAIARIVAAVPVPVIGNGDLLFPHEIAA 199 Query: 92 ILS-FGADKISINSPALADPTLITRLADRFGV 122 G + + AL P + D + Sbjct: 200 ARERSGCAAVMVARAALIKPWIFREAVDGYWD 231 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 51/194 (26%), Gaps = 4/194 (2%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL--SFGADKISINSPALADPTLI 113 R + + + R +AG A L S GAD + IN D Sbjct: 35 KQKRNSEFALIRRFPGEPCFGVQLAGNKPDETAWAAALVESRGADFVDINFGCPIDYFTR 94 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 L G Q + + ++ L Q GA Sbjct: 95 KGLGASIGRQPQRMRRLV-EAIKGSVTNIPVTAKIRLGWNDDDRNYLQQAQAAVDGGAAA 153 Query: 174 IVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + ++ ++ D + + ++ VP+I +G A + + A Sbjct: 154 LFVHGRTRNARYRFAADWDAIARIVAAVPVPVIGNGDLLFPHEIAAARERSGCAAVMVAR 213 Query: 233 VFHKQIINIGELKA 246 + E Sbjct: 214 AALIKPWIFREAVD 227 >UniRef50_A4RU69 Predicted protein n=3 Tax=Chlorophyta RepID=A4RU69_OSTLU Length = 345 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHV 202 + + R ++ ET + + ++ G ++ +K V E Sbjct: 153 THVTCKIRLLESERETAELAKMIESCGVSAFAVHGRYIPQRPREPAHWNLIKNVVEAVDC 212 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAAS 232 P+IA+G E F A+ A Sbjct: 213 PVIANGDVECYEDFARIRAQTGAASAMCAR 242 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 25/84 (29%), Gaps = 2/84 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPFCVAGGIKSLED-AA 90 LAK G + R + + V E +D P G ++ ED A Sbjct: 169 AELAKMIESCGVSAFAVHGRYIPQRPREPAHWNLIKNVVEAVDCPVIANGDVECYEDFAR 228 Query: 91 KILSFGADKISINSPALADPTLIT 114 GA A + ++ Sbjct: 229 IRAQTGAASAMCARGAQWNLSIFR 252 >UniRef50_Q9ZLB6 Probable tRNA-dihydrouridine synthase n=23 Tax=Epsilonproteobacteria RepID=DUS_HELPJ Length = 328 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 3/120 (2%) Query: 32 IVPLAKRYAEEGADELVFYDITASS--DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 +A + D +V + T S +D ++ + +++ P G I S++ A Sbjct: 148 PKEIAHALNDAPVDYVVVHGRTRSDRYQKDKIDYESIALMKKILKKPVIANGEIDSVKKA 207 Query: 90 AKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 ++L AD + I L P + ++ + VV D + G Sbjct: 208 FEVLQITQADGLMIGRATLRAPWIFWQIRNNTTELPAVVKKDLVLEHFDKMVEFYGDRGV 267 Score = 50.2 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + + +V++ + D E + ++++ P+IA+G +++ Sbjct: 148 PKEIAHALNDAPVDYVVVHGRTRSDRYQKDKIDYESIALMKKILKKPVIANGEIDSVKKA 207 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKA 246 E + DG + + +++ Sbjct: 208 FEVLQITQADGLMIGRATLRAPWIFWQIRN 237 >UniRef50_B5YJH1 Dihydroorotate dehydrogenase n=24 Tax=Bacteria RepID=PYRD_THEYD Length = 303 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 21/105 (20%) Query: 35 LAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVSRVAEVI 73 +A+ EEGAD + + +T G R V V VA+ + Sbjct: 176 MARICEEEGADAVSLINTIPAMVIDIKTRKSMIGTLTGGLSGPAIRPVALRAVWEVAQAV 235 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 IP GGI S EDA + L GA I + + +P + + Sbjct: 236 KIPVIGVGGIVSAEDALQFLIAGAKAIQVGTANFINPIATVEIIE 280 Score = 42.9 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 10/80 (12%) Query: 183 GVRNGYDLEQLK-----KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 G +G + + +V + +P+I GG + E L+ A + Sbjct: 213 GGLSGPAIRPVALRAVWEVAQAVKIPVIGVGGIVSAEDALQFLI-AGAKAIQVGTANFIN 271 Query: 238 IIN----IGELKAYLATQGV 253 I I +K +L + + Sbjct: 272 PIATVEIIEGIKQFLIEENI 291 >UniRef50_B3RKU4 Putative uncharacterized protein n=2 Tax=Metazoa RepID=B3RKU4_TRIAD Length = 581 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 8/157 (5%) Query: 40 AEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLED-AAKILSFG 96 E GA + + + ++ D S+++ A D +P G I S ED + + Sbjct: 385 REWGASLVTLHGRSREQRYTKLADWSYINECATAADPMPLIGNGDILSFEDYLEHMNNTN 444 Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 + I AL P L T + +R I + + Y + + D T+ Sbjct: 445 VAGVMIARGALIKPWLFTEIKER-RHWDISANERFEFLRKYVNYGLEHWGSDSLGVEKTR 503 Query: 157 WETLDW---VQEVQKRGAGEIVLNMM-NQDGVRNGYD 189 L+W + G E V + ++ G + Sbjct: 504 RFLLEWLSFLHRYIPIGVLERVPQRINDRPPYYVGRN 540 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 2/109 (1%) Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE 198 V + + + ++++ GA + L+ +++ D + + Sbjct: 358 LSVPLTVKLRTGILAKKSTAHKLIPQIREWGASLVTLHGRSREQRYTKLADWSYINECAT 417 Query: 199 VCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +PLI +G + E +LE + +V G + A + E+K Sbjct: 418 AADPMPLIGNGDILSFEDYLEHMNNTNVAGVMIARGALIKPWLFTEIKE 466 >UniRef50_A5G9T5 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=Deltaproteobacteria RepID=A5G9T5_GEOUR Length = 374 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITAS-------------SDGRVVDKSWVSRVAEVIDI 75 + D + A+ EEG D + T + + + R+ + + Sbjct: 231 LDDAITAARALDEEGIDAIEVSGGTPASGDRTPVRQGIDSREQEAYNLPLAYRIKQAVSC 290 Query: 76 PFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P V GG++S E I+ AD +++ P + +P L R A G + I Sbjct: 291 PVMVVGGLRSFEIVEGIIRREEADYVAMARPFIREPALAKRWAG--GDESHARCISCNGC 348 Query: 135 AETGKYHVNQYTGDESRTRVTQ 156 + G Y + + ++ Sbjct: 349 FKPGLKSGGIYCVVDRIEQESK 370 >UniRef50_C1TL75 tRNA-dihydrouridine synthase n=2 Tax=Synergistaceae RepID=C1TL75_9BACT Length = 345 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 1/94 (1%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 D + A E GA + + TAS D V RVA + +G I ED Sbjct: 165 DTLEFASALVEAGAANVGVHGRTASQRYEGTSDFDEVRRVARALPGVISASGDISGPEDV 224 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQ 123 +K L+ G + + + DP ++ R+ G Sbjct: 225 SKALAGGCVSVFLARGGVTDPFVLPRILSHLGYN 258 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 57/183 (31%), Gaps = 24/183 (13%) Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 + +A + +PF GI K+L GA + L+ L + R + Sbjct: 96 AEIALSLGVPFDA-LGINMACPMPKVLKKGA-----GARLLSRLDLAVDMVRRLNRLGLP 149 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 V G + +TL++ + + GA + ++ Sbjct: 150 VWPKIRKIVPDG----------------SGPDTLEFASALVEAGAANVGVHGRTASQRYE 193 Query: 187 GY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 G D +++++V + ASG E +A A + + Sbjct: 194 GTSDFDEVRRVARALPGVISASGDISGPEDVSKAL-AGGCVSVFLARGGVTDPFVLPRIL 252 Query: 246 AYL 248 ++L Sbjct: 253 SHL 255 >UniRef50_UPI00017B0A55 UPI00017B0A55 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A55 Length = 669 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 14/159 (8%) Query: 18 VKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITAS-SDGRVVDKSWVSRVAE- 71 VK + +A + + G + + + ++ D ++S ++ Sbjct: 453 VKIRTGVQEKT-----NIAHKLIPEMKKWGVSMITLHGRSREQRYTKLADWDYISTCSKL 507 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD-RFGVQCIVVGID 130 +P G I S EDA G I I AL P + T + + R +D Sbjct: 508 ASPVPLFGNGDILSYEDAMMAKETGVSGIMIARGALIKPWIFTEIKEKRHWDISSGERLD 567 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 D + + + D T+ L+W+ + + Sbjct: 568 ILRDFTN--FGLEHWGSDTRGVEKTRSFMLEWLSFMCRY 604 Score = 53.3 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 50/155 (32%), Gaps = 5/155 (3%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + D + INS D L+ + G+ + V + + Sbjct: 403 NTEVDFVDINSGCPID--LVFKKGGGCGLMTRTRKFEEIVKGMNYVLDVPLTVKIRTGVQ 460 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIASGGAG 211 + E++K G I L+ +++ D + + + VPL +G Sbjct: 461 EKTNIAHKLIPEMKKWGVSMITLHGRSREQRYTKLADWDYISTCSKLASPVPLFGNGDIL 520 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E + ++ V G + A + E+K Sbjct: 521 SYEDAM-MAKETGVSGIMIARGALIKPWIFTEIKE 554 >UniRef50_A1X3A1 Putative NADH:flavin oxidoreductase n=2 Tax=Anaerostipes caccae RepID=A1X3A1_9FIRM Length = 357 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 55/175 (31%), Gaps = 35/175 (20%) Query: 3 AKRIIPCLDVRDGQ----------VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVF--- 49 R+ LD+ +G V+ + + +A + + G D L Sbjct: 191 RMRV--VLDIMEGIRHSCGENFLISVRL--GFDEPDLESSAFMAGTFEKAGMDFLHVSTG 246 Query: 50 ------YDITASSDGRVVDKSW-VS-----RVAEVIDIPFCVAGGIKSLEDAAKILSFGA 97 D + + + + + ++ + + P GGI+ ++ +L Sbjct: 247 FGSTGFMD-ERTMENPPDEFPFNIRIWGAMQMKQRVSCPVIAVGGIRQVQQGMFLLEQEC 305 Query: 98 -DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH-VNQYTGDES 150 D +++ L DP + ++ + IV + + YH + Sbjct: 306 ADFVALGRALLCDPEWVIKIKQ---GREIVSCRNCRKCLWSTDYHKCPGWREYHG 357 >UniRef50_Q1G992 Dihydroorotate dehydrogenase n=3 Tax=Lactobacillus delbrueckii RepID=Q1G992_LACDA Length = 309 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 21/112 (18%) Query: 32 IVPLAKRYAEEGADELVFYD------IT------------ASSDG---RVVDKSWVSRVA 70 IV +A+ GAD L + + G + V V++V Sbjct: 176 IVEIAQAAEGGGADGLTLINTLLVLHLDLKTRRPVLGNDFGGLYGQAVKPVAVRMVAQVK 235 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + +P GGI S EDAA+ + GA + I S + D I + D Sbjct: 236 QATSLPIIGVGGINSPEDAAEFILAGASAVQIGSMSFYDKLAIKHVIDGLPA 287 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 1/57 (1%) Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + +V++ +P+I GG + E E F A S+ + I + L Sbjct: 230 MVAQVKQATSLPIIGVGGINSPEDAAE-FILAGASAVQIGSMSFYDKLAIKHVIDGL 285 >UniRef50_C8X0F5 Dihydrouridine synthase DuS n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0F5_DESRD Length = 341 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 50/156 (32%), Gaps = 15/156 (9%) Query: 45 DELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISI 102 D L+ + A R + V E +D+P G + + +DA +L G I++ Sbjct: 178 DALIVHPRLAPDRRTRPPQWRDIRAVCEAVDLPVFGNGNVFTADDATAMLRQTGCQGIAL 237 Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 A A P + F A V Q + T + + L Sbjct: 238 GRMAAARPWIAAEWLGHFHP------------APETYPKVAQRMVELLWTSFPEGQALRL 285 Query: 163 VQEVQKRGAGEIVL-NMMNQDGVRNGYDLEQLKKVR 197 ++ A + + D R+ + K++ Sbjct: 286 YRKFMNYFAANFAFGHRLRSDLTRSATPEDLYKEIA 321 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 14/46 (30%) Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++ V E +P+ +G T + R G + Sbjct: 195 PQWRDIRAVCEAVDLPVFGNGNVFTADDATAMLRQTGCQGIALGRM 240 >UniRef50_B0S913 tRNA-dihydrouridine synthase n=7 Tax=Leptospira RepID=B0S913_LEPBA Length = 337 Score = 54.1 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 1/87 (1%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLI 205 L+ ++ ++ G I ++ + G D + +++ +VP+ Sbjct: 140 KIRLGWDANSLNYLETLKVLEDSGVSAISVHGRTKAMAYTGIADWNAIGEIKSRANVPIY 199 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAAS 232 +G + + LE + VD L Sbjct: 200 GNGDVQSYKEALEKKKTYGVDLVLIGR 226 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 36/90 (40%), Gaps = 2/90 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPFCVAGGIKSL-EDAA 90 + K + G + + T + + D + + + ++P G ++S E Sbjct: 153 LETLKVLEDSGVSAISVHGRTKAMAYTGIADWNAIGEIKSRANVPIYGNGDVQSYKEALE 212 Query: 91 KILSFGADKISINSPALADPTLITRLADRF 120 K ++G D + I A+ +P + + +F Sbjct: 213 KKKTYGVDLVLIGRKAIGNPWVFGKTPKQF 242 >UniRef50_C1E1T8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E1T8_9CHLO Length = 662 Score = 54.1 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 25/200 (12%), Positives = 54/200 (27%), Gaps = 12/200 (6%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--------LEDAAKILSFGADKISINSPAL 107 G+ + + + R V GG LED + G D I IN Sbjct: 343 LQGQPAEWALLRRHPSEDIFGAQVCGGYSDSMSRCMQLLED-EVVSKGGLDFIDINMGCP 401 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 D + + A + + + ++ Sbjct: 402 IDLVCNKGAGSMLLEKPARMEQLVRASAPL--LSCPLTLKTRMGYFDNKRVAHEIIPKMV 459 Query: 168 KRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 G + L+ ++ + D + + + + LI +G + +++ V Sbjct: 460 DWGLAGMTLHGRSRQQRYSRLADWDYINQCARASPIQLIGNGDVFSYHDYVKNVEGQGVA 519 Query: 227 GALAASVFHKQIINIGELKA 246 + A + E+K Sbjct: 520 TCMIARGALIKPWIFTEIKE 539 >UniRef50_C4Q4G5 tRNA-dihydrouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4Q4G5_SCHMA Length = 370 Score = 54.1 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 8/85 (9%), Positives = 25/85 (29%), Gaps = 9/85 (10%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREV--------CHVPLIASGGA 210 ++ V+ + G + L+ ++++ + +P+I +G Sbjct: 204 VELVRRLAVMGVDWVTLHARTPQQRSRDCASWNVVQELVDCKIKHCYLGTDIPIILNGDV 263 Query: 211 GTMEHFLEAFRDADVDGALAASVFH 235 + +A G + Sbjct: 264 RGLNDAYDAQETTGCHGVMVGRALL 288 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 54/165 (32%), Gaps = 22/165 (13%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE--------VIDIPFCVAGGI 83 V L +R A G D + + T R + V + + DIP + G + Sbjct: 204 VELVRRLAVMGVDWVTLHARTPQQRSRDCASWNVVQELVDCKIKHCYLGTDIPIILNGDV 263 Query: 84 KSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + L DA G + + L P L F I V Y E Sbjct: 264 RGLNDAYDAQETTGCHGVMVGRALLKFPHL-------FTPNYIEVENSLRYLFEDWLLLS 316 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 QYTG + VT + W+ E ++L+ + G G Sbjct: 317 TQYTG--GTSFVTVHQQAYWMMEPFLDKTNRLILHSI---GSFQG 356 >UniRef50_A3JQL6 2-nitropropane dioxygenase, NPD n=3 Tax=Proteobacteria RepID=A3JQL6_9RHOB Length = 332 Score = 54.1 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 4/104 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAEVIDIP 76 V + LA++ ++GAD LV G ++ V D P Sbjct: 123 VHNYGGLVFADVISP-KLARKALDKGADGLVLVCAGAGGHTGEFAMLPFIEEVCSFFDGP 181 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V GGI + + + G D + + LA + ++ + Sbjct: 182 LIVGGGIGTGRAIRAVENLGVDFAYLGTRFLATKETM--ISQEY 223 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 7/163 (4%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLA-DRFGVQCIVV---GIDTWYDAETGK 139 ++ D L + A +IT + RF + +V D A G Sbjct: 58 RTTNDLRNWL-TQISSDVVPRDAPWAMNMITHSSYGRFDEELALVEEFQPDLVITALGGP 116 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVRE 198 + V Q+ + + ++ +GA +VL G + L +++V Sbjct: 117 HRVTQHVHNYGGLVFADVISPKLARKALDKGADGLVLVCAGAGGHTGEFAMLPFIEEVCS 176 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 PLI GG GT + A + VD A + F + Sbjct: 177 FFDGPLIVGGGIGTGR-AIRAVENLGVDFAYLGTRFLATKETM 218 >UniRef50_C3WAT9 2-nitropropane dioxygenase n=5 Tax=Fusobacterium RepID=C3WAT9_FUSMR Length = 312 Score = 53.7 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 3/99 (3%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVI 73 +VVKG I + LAK + GAD +V + + + + I Sbjct: 106 EVVKGT-GVKVIPIVSTLKLAKISQKLGADAIVVEGGNAGGHLGTNLDSWDIMEEITKNI 164 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 DIP AGG+ + EDA ++LS G D + + S +A Sbjct: 165 DIPVFGAGGVITPEDAERMLSLGVDGVQMGSRFVASEEC 203 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 61/185 (32%), Gaps = 21/185 (11%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLE------DAAKIL--SFGADKISINSPALADP 110 RV + VA + + + E A ++ GA ++I Sbjct: 21 RVSMAKLAAAVANEGGVGVIAGTTLSTDELKAEIKKARDMITNEGGALAVNIMFAVTNFM 80 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 L+ + G+ I+ G D + + + TL + QK G Sbjct: 81 DLVKASIEA-GIDIIIFGAGFSRD-------IFEVVKGTGVKVIPIVSTLKLAKISQKLG 132 Query: 171 AGEIVLNMMNQDGVRNGYD---LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 A IV+ N G G + + ++++ + +P+ +GG T E VDG Sbjct: 133 ADAIVVEGGNAGGHL-GTNLDSWDIMEEITKNIDIPVFGAGGVITPEDAERML-SLGVDG 190 Query: 228 ALAAS 232 S Sbjct: 191 VQMGS 195 >UniRef50_C1EGQ3 Predicted protein n=2 Tax=Micromonas RepID=C1EGQ3_9CHLO Length = 353 Score = 53.7 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 1/94 (1%) Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVRE 198 + + R T +T++ + ++K G ++ +++K+V E Sbjct: 150 LPAETHVTCKIRLLETIEQTVELARVIEKCGVSAFGVHGRYVGQRPRDAAHWDKIKQVVE 209 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 P+IA+G F + + A+ Sbjct: 210 SVSCPVIANGDVFEYSDFEKIRAETGAAAAMCGR 243 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 2/85 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V LA+ + G + R + +V E + P G + D K Sbjct: 170 VELARVIEKCGVSAFGVHGRYVGQRPRDAAHWDKIKQVVESVSCPVIANGDVFEYSDFEK 229 Query: 92 I-LSFGADKISINSPALADPTLITR 115 I GA A+ + ++ + Sbjct: 230 IRAETGAAAAMCGRGAMWNQSIFRK 254 >UniRef50_C8W700 Dihydroorotate dehydrogenase family protein n=2 Tax=Atopobium RepID=C8W700_ATOPD Length = 308 Score = 53.7 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 21/110 (19%) Query: 31 DIVPLAKRYAEEGADELVFYD------------------ITASSDGRVVDKSWVSRV--- 69 ++ + K + EGAD L + T G + + V V Sbjct: 177 NVAEIGKAFEAEGADGLTLINSIPGMSINVHTRKSRLSKPTGGLSGPLCHNAAVRMVWEC 236 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 A+ + IP C GG+++ EDAA+ + GA +S+ S L DP R+ + Sbjct: 237 AQAVSIPICGVGGVETGEDAAEFILAGATAVSVGSANLYDPMCAPRILNE 286 >UniRef50_D2VPP8 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VPP8_NAEGR Length = 427 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 59/164 (35%), Gaps = 4/164 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEV 72 G ++ + + LA++ GA + + T + V+ + ++ Sbjct: 254 GVKIRLHPEDDTLEFRKTIELARQIEMAGASWVTVHGRTHKQRTKNTKVNPDGPKTIKQI 313 Query: 73 IDIPFCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 +++P G I +L D+ + G D + L++P L + D +CI + Sbjct: 314 LNVPVMHNGDIFTLGDSDRFAKETGCDGVMSARGLLSNPALFSGY-DYVPFECIQRYLQI 372 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 +H+ Q+ Q+ + D ++ + I+ Sbjct: 373 AIQIGGVPFHILQHHIMFMLYSHHQFLSADVIEFSECTSVASIL 416 Score = 47.2 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDG--VRNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 +T++ ++++ GA + ++ + + K ++++ +VP++ +G T+ Sbjct: 270 KTIELARQIEMAGASWVTVHGRTHKQRTKNTKVNPDGPKTIKQILNVPVMHNGDIFTLGD 329 Query: 216 FLEAFRDADVDGALAASVFHKQI 238 ++ DG ++A Sbjct: 330 SDRFAKETGCDGVMSARGLLSNP 352 >UniRef50_Q6A959 TIM-barrel enzyme, NifR3 family n=2 Tax=Propionibacterium acnes RepID=Q6A959_PROAC Length = 411 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 2/94 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + A+ + GA + + T + + + + +D+P G I DA Sbjct: 196 IDSARAAVDSGAAAVCLHARTVAEAYAGHSHWDAIGELVKTVDVPVIGNGDIWEASDAMA 255 Query: 92 IL-SFGADKISINSPALADPTLITRLADRFGVQC 124 ++ G + + L P L LAD F + Sbjct: 256 MVGQTGCAGVEVGRGCLGRPWLFRDLADAFAGRD 289 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 29/111 (26%), Gaps = 1/111 (0%) Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVC 200 V +D + GA + L+ G+ + + ++ + Sbjct: 178 VPVTVKTRIGIDPEHITYIDSARAAVDSGAAAVCLHARTVAEAYAGHSHWDAIGELVKTV 237 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 VP+I +G + G + +L A + Sbjct: 238 DVPVIGNGDIWEASDAMAMVGQTGCAGVEVGRGCLGRPWLFRDLADAFAGR 288 >UniRef50_A8S5R8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S5R8_9CLOT Length = 636 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 20/117 (17%) Query: 18 VKGVQFRNHEIIG----DIVPLAKRYAEEGADELVFYDITASSDG-----------RVVD 62 V+ + G D LA E GAD L D++ +G + Sbjct: 214 VRL-NGDDMVSDGNLGRDSAALAMLMEEAGADLL---DVSGGMNGVGYGIAPAAVKTGYN 269 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLAD 118 + V+ IP VAG I E A +L G + I++ ADP + + A Sbjct: 270 TDPAEEIRRVVSIPVAVAGRINEPEYAESLLRKGDVEFITLGRALFADPEFVNKAAQ 326 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 39/118 (33%), Gaps = 8/118 (6%) Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM------ 178 +++ E V D ++ +++ GA + ++ Sbjct: 197 MIIEGIKKVCGEDYPVSVRLNGDDMVSDGNLGRDSAALAMLMEEAGADLLDVSGGMNGVG 256 Query: 179 --MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + V+ GY+ + +++R V +P+ +G E+ R DV+ Sbjct: 257 YGIAPAAVKTGYNTDPAEEIRRVVSIPVAVAGRINEPEYAESLLRKGDVEFITLGRAL 314 >UniRef50_C7PEQ0 Geranylgeranylglyceryl phosphate synthase n=3 Tax=Sphingobacteriales RepID=C7PEQ0_CHIPD Length = 252 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 34/75 (45%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 S + + +S +SRVA + P V GGI+ E A GAD I + + + +LI Sbjct: 178 GSGARKPITESMISRVASQVSAPIIVGGGIRDAEKAYLNCKAGADIIVVGNAIEKETSLI 237 Query: 114 TRLADRFGVQCIVVG 128 +AD V+ Sbjct: 238 KEMADAVHAAAPVLK 252 Score = 39.8 bits (92), Expect = 0.086, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 60/211 (28%), Gaps = 20/211 (9%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG----IKSL 86 DI LA + D + + S V + + DIP + G + Sbjct: 33 DIADLAAKCTAAKVDYIF---LGGSLVITNHLDECVQQFKTLCDIPVVLFPGSPSQVSRY 89 Query: 87 EDAAKILSFGADK---ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 DA LS + + + I L+ P + + +++ G Sbjct: 90 ADALLYLSVISGRNPELLIGQHVLSAPAVKKSGLEVISTGYVLI---------DGGAPTT 140 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 + + + + + G V+ M G R + +V P Sbjct: 141 VSYISNTTPIPSDKDDIAMCTAMAGEMLGMKVVFMDAGSGARKPITESMISRVASQVSAP 200 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +I GG E + A D + + Sbjct: 201 IIVGGGIRDAEKAYLNCK-AGADIIVVGNAI 230 >UniRef50_C9M6H2 Dihydroorotate oxidase n=2 Tax=Synergistaceae RepID=C9M6H2_9BACT Length = 317 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 21/109 (19%) Query: 31 DIVPLAKRYAEEGADELVFYD--ITASSDGR-------------------VVDKSWVSRV 69 D +AK + GA LV + + A+ D + V +V Sbjct: 176 DPCAVAKAAQDAGASALVVANTWLGAAIDTVKARPAFDRVVAGLSGPAIFPLALRMVWQV 235 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 +DIP GG+ S + A +L GA + + +D +++ R+A Sbjct: 236 CGAVDIPVVGCGGVASADSAVAMLMAGAAAVEVGMALFSDFSVLERIAR 284 >UniRef50_Q8TXM0 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Methanopyrus kandleri RepID=GGGPS_METKA Length = 239 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFC 78 + + F E+I V A G + + + V V RV+ I + Sbjct: 141 RVIPFDRVEVI---VAYALAAKHLGMKAVYLEAGSGA--PEPVPPEVVRRVSG-IGVFTI 194 Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V GGI+S E A ++ GAD I + DP L + + Sbjct: 195 VGGGIRSPETARELAEAGADAIVTGTAVERDPDLAAEIVEA 235 >UniRef50_UPI000186DAF4 tRNA-dihydrouridine synthase, putative n=2 Tax=Eumetazoa RepID=UPI000186DAF4 Length = 557 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 31/88 (35%), Gaps = 3/88 (3%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKV-REVCHVPLIASGGAGTMEHFLEA 219 + G I ++ +++ D + + + +P+ +G + E + A Sbjct: 354 LIPMFVDSGVSLITVHGRSREQRYTRTADWNYINECGKAASPIPVFGNGDVLSFEDYNRA 413 Query: 220 FRDAD-VDGALAASVFHKQIINIGELKA 246 ++ + V G + + E+K Sbjct: 414 LKENNNVSGVMVGRGALYKPWIFKEIKE 441 Score = 53.3 bits (127), Expect = 9e-06, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 49/136 (36%), Gaps = 5/136 (3%) Query: 38 RYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKIL-- 93 + + G + + + R D ++++ + IP G + S ED + L Sbjct: 357 MFVDSGVSLITVHGRSREQRYTRTADWNYINECGKAASPIPVFGNGDVLSFEDYNRALKE 416 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + + + AL P + + ++ I + Y ++ + D Sbjct: 417 NNNVSGVMVGRGALYKPWIFKEIKEQ-KNWDISSSERFDIIKKFVNYGLDHWGSDTMGVE 475 Query: 154 VTQWETLDWVQEVQKR 169 +T+ TL+W+ + + Sbjct: 476 LTRKFTLEWLSFLYRY 491 >UniRef50_A3JG66 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=A3JG66_9ALTE Length = 335 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 1/96 (1%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + Q + GAGEIV++ ++ E++ K RE +IA+G T+ + Sbjct: 151 VACAQALDAAGAGEIVIHARSKTDGYKPPAYWEEIAKAREAVKAKVIANGDIFTVADYWR 210 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + D + + +++A + +E Sbjct: 211 CREVSGCDDVMIGRGLVARPDLARQIRASQRGESIE 246 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 6/135 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + +G V A+ GA E+V + + + +++ E + Sbjct: 139 KMRLGYDDRSMG--VACAQALDAAGAGEIVIHARSKTDGYKPPAYWEEIAKAREAVKAKV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL--ADRFGVQCIVVGIDTWYD 134 G I ++ D + G D + I +A P L ++ + R ++ + Sbjct: 197 IANGDIFTVADYWRCREVSGCDDVMIGRGLVARPDLARQIRASQRGESIELMTWPEALAL 256 Query: 135 AETGKYHVNQYTGDE 149 + Y + + D+ Sbjct: 257 VQEYGYALQGWLEDK 271 >UniRef50_Q21L63 Dihydrouridine synthase, DuS n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21L63_SACD2 Length = 318 Score = 53.3 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 36/93 (38%), Gaps = 1/93 (1%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + ++ GA E+ ++ ++ + +R+ +P++A+G ++E F Sbjct: 159 AKAIEAAGANELCVHARSKTDGYQPPAYWHYIGDIRDNLSIPVVANGEIWSLEDFKRCAE 218 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + + + E+K Y+A + Sbjct: 219 QSKCSDFMLGRGLLAKPDLALEIKQYMAGEAFN 251 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 6/103 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 ++ + + AK GA+EL + + + ++ + + + IP Sbjct: 145 IRLGYLNRDSYLRN----AKAIEAAGANELCVHARSKTDGYQPPAYWHYIGDIRDNLSIP 200 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 G I SLED + + LA P L + Sbjct: 201 VVANGEIWSLEDFKRCAEQSKCSDFMLGRGLLAKPDLALEIKQ 243 >UniRef50_A1BHW3 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=Chlorobiaceae RepID=A1BHW3_CHLPD Length = 411 Score = 53.3 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLA 117 R + + + + IP GGI ++ED + +L G AD ++++ P + +P ++ +L Sbjct: 308 RNYNLEVARAIKKAVSIPVIAVGGIHTMEDISAVLVSGAADFVAMSRPFIIEPDIVRKLR 367 Query: 118 D 118 + Sbjct: 368 E 368 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%) Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 Y+LE + +++ +P+IA GG TME D + Sbjct: 310 YNLEVARAIKKAVSIPVIAVGGIHTMEDISAVLVSGAADFVAMSR 354 >UniRef50_C8X244 Dihydrouridine synthase DuS n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X244_DESRD Length = 328 Score = 53.3 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 49/176 (27%), Gaps = 27/176 (15%) Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 V + E + G K++ GA + + DP + R+ G Sbjct: 90 VRWLTERGFHWIDLNAG----CPVRKVIKTGA-----GAALMEDPQRLVRIMQTIGRAAP 140 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 V G + L + + G I L+ Sbjct: 141 VQAGVKLRLPADG----------------STDGLLRLRDTLARAGVSWITLHPRTARQGY 184 Query: 186 NG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS-VFHKQII 239 G L ++ E VP++ASG + F VDG + A H I Sbjct: 185 GGLAQWSALSRMAESSPVPIVASGDLWNAQAARRCFEQTGVDGIMFARGALHNPRI 240 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 2/78 (2%) Query: 39 YAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FG 96 A G + + TA G + S +SR+AE +P +G + + + A + G Sbjct: 165 LARAGVSWITLHPRTARQGYGGLAQWSALSRMAESSPVPIVASGDLWNAQAARRCFEQTG 224 Query: 97 ADKISINSPALADPTLIT 114 D I AL +P + Sbjct: 225 VDGIMFARGALHNPRIFK 242 >UniRef50_A3U098 Putative uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U098_9RHOB Length = 320 Score = 53.3 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 5/103 (4%) Query: 17 VVKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASSDGRVVDKSWV--SRVAEV 72 V+ V + D++ LA++ A+ G D LV + + V RV Sbjct: 114 VIPTVHGYGGIVFADVINEELARKAADAGVDGLVLV-CSGAGGHTGDLSPMVFVERVRRF 172 Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 D + GGI S E + GAD I + +A + Sbjct: 173 FDGYIALGGGISSGEAILAAQTLGADFGYIGTSFIAAQESLAE 215 >UniRef50_Q87N01 tRNA-dihydrouridine synthase C n=54 Tax=Gammaproteobacteria RepID=DUSC_VIBPA Length = 322 Score = 53.3 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 53/176 (30%), Gaps = 15/176 (8%) Query: 86 LEDAAKILSFGADKISIN---SPALADPTLITRLADRFGVQCIVVGIDTW-YDAETGKYH 141 E+A + GA I +N + + + + V Sbjct: 78 AENAIRAAELGARGIDLNFGCPAKMVNKSKGGAALLQHPELIHSVVKACRDAVPANIPVS 137 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR--NGYDLEQLKKVREV 199 G E+ + + V +Q GA E+ ++ + G + E + K+RE Sbjct: 138 AKIRLGWEN-----PEDCFEIVDAIQSAGANELTVHARTKQGGYKASEIKWEYINKIRER 192 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +PLIA+G E VD + NI L + + Sbjct: 193 FSIPLIANGEIWNFEDGQRCIETTGVDSLMVCR----GAFNIPNLGNMVKHNHTPM 244 Score = 49.9 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 30 GDIVPLAKRYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 D + GA+EL + T + +++++ E IP G I + E Sbjct: 148 EDCFEIVDAIQSAGANELTVHARTKQGGYKASEIKWEYINKIRERFSIPLIANGEIWNFE 207 Query: 88 DAAKILS-FGADKISINSPALADPTL 112 D + + G D + + A P L Sbjct: 208 DGQRCIETTGVDSLMVCRGAFNIPNL 233 >UniRef50_B8BQ55 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQ55_THAPS Length = 451 Score = 52.9 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 11/113 (9%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDI-------PFCVAG 81 +R + G D + + T + D + + R + + P G Sbjct: 196 PEERIQRLIDCGVDLITVHGRTRFENKVAVGKADWNSIERCVQTARVYSGNAQYPLIANG 255 Query: 82 GIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 GI++ D K L A + + L +P L + L++ + G+ Sbjct: 256 GIETYNDVEKCLEQTQASGVMSSESLLENPGLFSNLSEETACDTVARGMLERQ 308 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 39/131 (29%), Gaps = 17/131 (12%) Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 GV V T DAE GK + +Q + G I ++ Sbjct: 162 REIGVTAKVRLPPTKADAEAGKLG-------NMSELSHLPTPEERIQRLIDCGVDLITVH 214 Query: 178 MMNQDGVRNGY---DLEQLKKVREVCHV-------PLIASGGAGTMEHFLEAFRDADVDG 227 + + D +++ + V PLIA+GG T + G Sbjct: 215 GRTRFENKVAVGKADWNSIERCVQTARVYSGNAQYPLIANGGIETYNDVEKCLEQTQASG 274 Query: 228 ALAASVFHKQI 238 +++ + Sbjct: 275 VMSSESLLENP 285 >UniRef50_Q02X79 Dioxygenase n=3 Tax=Lactococcus lactis RepID=Q02X79_LACLS Length = 281 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 59/176 (33%), Gaps = 5/176 (2%) Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V+ V+ + +GG ++ + +++ K +SP + L+ + D+ Sbjct: 22 TNVELVAVVSNNGALGIIGSGG-RTASELQEMIRQ--TKRLTSSPFGVNLMLLDKNIDQL 78 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 I +L +++ + I+ Sbjct: 79 LQVICDEKISVVTTGAGSPKKYIDTIVANHIKLFPVVPSLKIAKKMLELPITGIIAEGTE 138 Query: 181 QDGVRNGYDLE-QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 G +L L+++ +C +PLIA+GG F A ++ GA + F Sbjct: 139 AGGHVGTQNLSSLLEEIASLCPLPLIAAGGIHDYHSFSSA-KNLGASGAQVGTAFL 193 >UniRef50_C0GCL4 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCL4_9FIRM Length = 244 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 A G L + S V V V + +++P V GGI++ A ++L Sbjct: 158 AAAAQLMGFKYLYLE--SGSGSPVSVPPEMVKAVKDTVEMPVIVGGGIRTAAVARQLLEA 215 Query: 96 GADKISINS 104 GAD + + Sbjct: 216 GADILVTGT 224 Score = 41.4 bits (96), Expect = 0.031, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 5/112 (4%) Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 V + R QW + Q G + L + G E +K V++ Sbjct: 135 MSVGEVGEANLIDRDDQWTVCGYAAAAQLMGFKYLYLESGS--GSPVSVPPEMVKAVKDT 192 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF--HKQIINIGELKAYLA 249 +P+I GG T +A D + +V H+ + E+ A L Sbjct: 193 VEMPVIVGGGIRTAA-VARQLLEAGADILVTGTVVERHEYKQRLSEILAVLQ 243 >UniRef50_A8MRX7 Uncharacterized protein At3g63510.2 n=5 Tax=Arabidopsis thaliana RepID=A8MRX7_ARATH Length = 386 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 59/208 (28%), Gaps = 35/208 (16%) Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSF-GADKISINSPALA 108 ++ V + G +++L AAK+ G D+I++N Sbjct: 63 NLDRFLAFSPQQHPIV----------LQLGGSNVENLAKAAKLSDAYGYDEINLNCGC-P 111 Query: 109 DPTLITRLADRFGVQCIV----VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 P + FGV ++ VG A V + E D++ Sbjct: 112 SPKVAGHGC--FGVSLMLKPKLVGEAMSAIAANTNVPVTVKCRIGVDNHDSYDELCDFIY 169 Query: 165 EVQKR-GAGEIVLNMMNQDGVRNGYDLE------------QLKKVREVCHVPLIASGGAG 211 +V +++ + + G VR+ + +GG Sbjct: 170 KVSTLSPTRHFIVHS--RKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFTINGGIT 227 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQII 239 ++ A ++ G + + Sbjct: 228 SVSKVNAALKE-GAHGVMVGRAAYNNPW 254 >UniRef50_C9M7Q0 Dihydrouridine synthase family protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7Q0_9BACT Length = 317 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 2/114 (1%) Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVR 197 ++ + + T ++VQ + + GA + ++ G D + +K++ Sbjct: 115 RFGFPVWPKVRKEPAGSGITTEEFVQILFEAGASCVAVHGRTPGQRYEGQADRKSVKELC 174 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 ++ASG T E L+ A L A F + L+ + Sbjct: 175 RAFPGRILASGDVFTAEDVLDYL-SAGAGAVLLARGFIADPFIVPRSLDLLSGR 227 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 1/92 (1%) Query: 34 PLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + E GA + + T D+ V + +G + + ED Sbjct: 137 EFVQILFEAGASCVAVHGRTPGQRYEGQADRKSVKELCRAFPGRILASGDVFTAEDVLDY 196 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQC 124 LS GA + + +ADP ++ R D + Sbjct: 197 LSAGAGAVLLARGFIADPFIVPRSLDLLSGRP 228 >UniRef50_A4YHD8 Indole-3-glycerol phosphate synthase n=13 Tax=Sulfolobaceae RepID=TRPC_METS5 Length = 250 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 74/253 (29%), Gaps = 52/253 (20%) Query: 5 RIIPCLDVRDGQVVKGVQ-------FRNHEIIG-----DIVPLAKRYAEEGADELVFYDI 52 +IIP + + VKG ++ G D + AK + GA + Sbjct: 32 QIIPRI-----RAVKGAGLNPVIAEYKRKSPSGFSEDRDPISYAKSMEQGGAVAISVITE 86 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 G ++ R+A + IP + + S GAD + + L + L Sbjct: 87 NTVFGGS---YEYLERIARNVKIPLLMKDFVVSENQVDTAYDLGADFVLLIVRILTEREL 143 Query: 113 --ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + +G++ +V D + S + + D Sbjct: 144 SGLLEYVRSYGMEALVEVHD----------REDLDIALRSGASLIGVNSRDL-------- 185 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 L + ++ L+++ +A G + E R+ D L Sbjct: 186 ---FSLT-IQKEMAMK-----LLEQIPSTVTK--VAESGIESAEEI-RLLREKGADAFLI 233 Query: 231 ASVFHKQIINIGE 243 S + I E Sbjct: 234 GSSLMRNPDKIKE 246 >UniRef50_Q583Y8 TRNA-dihydrouridine synthase 4, putative n=4 Tax=Trypanosoma RepID=Q583Y8_9TRYP Length = 419 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 5/99 (5%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDI 75 VVK + + V A++ GA + + T S V ++ + E + + Sbjct: 189 VVKMRVKDDVRLS---VDFARQCEAAGAAWITVHGRTPNCSAHAPVRFDAINTIREALGV 245 Query: 76 PFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLI 113 P GG++ A L+ G + LA+P Sbjct: 246 PVVANGGVRDPSTALQAALTAGVGGVMSGMGLLANPACF 284 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 1/119 (0%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 D I +N + L VV + V + R + Sbjct: 139 CDAIDLNCGCPQRRVMADGLGAALLRNPEVVADTVRCVRNALEGGVELPCVVKMRVKDDV 198 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTME 214 ++D+ ++ + GA I ++ + + + + +RE VP++A+GG Sbjct: 199 RLSVDFARQCEAAGAAWITVHGRTPNCSAHAPVRFDAINTIREALGVPVVANGGVRDPS 257 >UniRef50_UPI0000E479FB PREDICTED: similar to MGC108441 protein n=9 Tax=Strongylocentrotus purpuratus RepID=UPI0000E479FB Length = 497 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 68/242 (28%), Gaps = 43/242 (17%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGR-----VVDKSWVSRVAEVI---DIPFCVAGGIK 84 A A G D + + ++ GR ++ V E + + + GG++ Sbjct: 238 AESASDAANAGVDGI----LVSAHGGRQLESSPAPIDALAEVVEAVHGRGVEIYMDGGVR 293 Query: 85 SLEDAAKILSFGADKISINSPAL------ADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 + D K L GA + + P L + + V + E+ Sbjct: 294 TGTDVFKALGRGARAVFLGRPILWGLACQNNIPCFSFCIQSMPVYEADIPSARAAKQESI 353 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRG--AGEIVLNMMNQDGVRNGYD------- 189 K H + + T WE + W+++V I+ D G D Sbjct: 354 KNHFEYLREMQYNPKAT-WEYIRWIKKVTSLPVVCKGILTAESASDAANAGVDGILVSAH 412 Query: 190 -----------LEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++ L +V E V + GG T +A Sbjct: 413 GGRQQESSPAPIDALAEVVEAVHGRGVEVYMDGGVRTGTDVFKALGR-GARAVFLGRPIL 471 Query: 236 KQ 237 Sbjct: 472 WG 473 >UniRef50_B9Y4T3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T3_9FIRM Length = 242 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 71/239 (29%), Gaps = 48/239 (20%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE 71 +R G VV F G AE A V + ++ R + + + Sbjct: 11 LRGGLVVSCQAFDYEPFYG---------AEMMAKMAVSAKLGGAAAIRASWPENIRAIKK 61 Query: 72 VIDIPFCVAGGIK--------------SLEDAAKILSFGADKISINSPALAD--PTLITR 115 +D+P I +L A + GAD ++++ P +I Sbjct: 62 EVDLPIFGINKIMPEVYDKFRDVIITPTLTSARAVAEAGADIVAVDCTLRQGRTPEMIQT 121 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 L + + V+ + AE G+ + S T Sbjct: 122 LLQEYKAELDVMIMAEISTAEEGRIAASGGADILSTTIAG-------------------- 161 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 ++ + D ++++ E +P+ A G E ++AF+ S Sbjct: 162 YTPYSRQ--LDEPDYRLIEELVETTTLPINAEGRFHRPEQVVQAFK-TGAWTVTVGSAI 217 >UniRef50_A9BH24 Putative N-acetylmannosamine-6-phosphate epimerase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH24_PETMO Length = 502 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 24/197 (12%), Positives = 56/197 (28%), Gaps = 37/197 (18%) Query: 66 VSRVAEVIDIPFCVAGGIK------------SLEDAAKILSFGADKISINSPALADPTLI 113 + + +++++P GI + +D ++ +D I+I+ P + Sbjct: 50 IREIKKIVNLPVI---GITKNRSLKGAFITTTKKDIDNLVDADSDFIAIDCTRRERPEPL 106 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 L D + E V + + Sbjct: 107 PEL------------FDYLRKYYPHIGIIADIADIEDVKYVLPLKPDYIATTLAG----- 149 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 DL+ ++K ++ ++P+IA G T ++ +A S Sbjct: 150 --YTDYTSGRDL--PDLDLIEKTVKITNIPVIAEGNISTPQYARQAILY-GAYAVTVGSA 204 Query: 234 FHKQIINIGELKAYLAT 250 + + K +L Sbjct: 205 ITRPHVIAKNFKDHLKD 221 Score = 40.2 bits (93), Expect = 0.067, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 7/132 (5%) Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR----L 116 D + + ++ +IP G I + + A + + +GA +++ S A+ P +I + Sbjct: 160 PDLDLIEKTVKITNIPVIAEGNISTPQYARQAILYGAYAVTVGS-AITRPHVIAKNFKDH 218 Query: 117 ADRFGVQCI-VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 F I VGID G +S+ T + + + ++ Sbjct: 219 LKDFRNDEISAVGIDIGGTWTRGVLTDRFGEIIKSKKIPTAATGKEVISNMLSL-IKGLI 277 Query: 176 LNMMNQDGVRNG 187 N + G+ G Sbjct: 278 TNETHFMGIATG 289 >UniRef50_B9M3C8 Dihydrouridine synthase DuS n=2 Tax=Desulfuromonadales RepID=B9M3C8_GEOSF Length = 306 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 12/127 (9%) Query: 5 RIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKR---YAEEGADELVFYDITASSDGR 59 IIP L ++ +K D + + + D LV + T + Sbjct: 115 EIIPSLRRVIKGTFSLKMRAG-----YDDPEQILRLLPLFEAAKVDFLVLHPRTVLQQYQ 169 Query: 60 VVDKSWV-SRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLA 117 + + +RV +IP G I++ ++L GA + + A+ADP + RL Sbjct: 170 GLADHAITARVVRETEIPVIANGDIRTASAGLQLLEETGAAGLMLGRGAIADPFIFQRLR 229 Query: 118 DRFGVQC 124 + Sbjct: 230 QSAPSEP 236 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 1/86 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + + +VL+ G D +V +P+IA+G T L+ Sbjct: 145 LLPLFEAAKVDFLVLHPRTVLQQYQGLADHAITARVVRETEIPVIANGDIRTASAGLQLL 204 Query: 221 RDADVDGALAASVFHKQIINIGELKA 246 + G + L+ Sbjct: 205 EETGAAGLMLGRGAIADPFIFQRLRQ 230 >UniRef50_A1AT39 Dihydrouridine synthase, DuS n=7 Tax=Desulfuromonadales RepID=A1AT39_PELPD Length = 342 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 12/118 (10%) Query: 6 IIPCL--DVRDGQVVKGVQFRNHEIIGDI---VPLAKRYAEEGADELVFYDITASSDGRV 60 IIP L +R +K + L + G D LV + T Sbjct: 152 IIPALRKTIRGTFSIKLRSG-----YDNPRQIFDLLPLFEASGVDFLVLHPRTVLQKYAG 206 Query: 61 -VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 D + + +P G I+S+ +L GA + + A++DP L RL Sbjct: 207 FADHGITAEAVQRSTLPIIANGDIRSVATGRHVLRETGAAGLMLGRGAISDPLLFQRL 264 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 1/73 (1%) Query: 161 DWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 D + + G +VL+ G+ D + + +P+IA+G ++ Sbjct: 180 DLLPLFEASGVDFLVLHPRTVLQKYAGFADHGITAEAVQRSTLPIIANGDIRSVATGRHV 239 Query: 220 FRDADVDGALAAS 232 R+ G + Sbjct: 240 LRETGAAGLMLGR 252 >UniRef50_A8NZY7 tRNA-dihydrouridine synthase 3 n=2 Tax=Agaricales RepID=DUS3_COPC7 Length = 676 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 59/214 (27%), Gaps = 24/214 (11%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGG-----IKSLEDAAKILSFGADKISINSPAL 107 T+ G + S V R VAG + + E AK G D + +N Sbjct: 346 TSFLAGSKEEWSLVRRHPSEKIFGIQVAGNKPHTLVPTAEVIAKEFPTGVDFVDLNCGCP 405 Query: 108 ADPTLIT----RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 D L D G ++ V TG + Sbjct: 406 IDLVFKAGSGSALLDNAGKLGKIIQ-GMNRALGEIPLTVKIRTGVKEGRNNAHKL---MP 461 Query: 164 QEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH----------VPLIASGGAGT 212 + + A I L+ + D + +K+ VP+ G + Sbjct: 462 RISAEWSASAITLHGRTRQQRYTKLADWDYIKECVAAVRAREADEDLPPVPIFGGGDCFS 521 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + E + VDG + + E+K Sbjct: 522 SQDYWEKINNYGVDGVMIGRGALIKPWIFTEIKE 555 Score = 42.1 bits (98), Expect = 0.018, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 12/92 (13%) Query: 40 AEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVI----------DIPFCVAGG-IKSLE 87 AE A + + T ++ D ++ + +P G S + Sbjct: 465 AEWSASAITLHGRTRQQRYTKLADWDYIKECVAAVRAREADEDLPPVPIFGGGDCFSSQD 524 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADR 119 KI ++G D + I AL P + T + +R Sbjct: 525 YWEKINNYGVDGVMIGRGALIKPWIFTEIKER 556 >UniRef50_B0S343 NADH-dependent flavin oxidoreductase n=3 Tax=Clostridia RepID=B0S343_FINM2 Length = 330 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 11/98 (11%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITA------SSDGRVVDKSWVSR-VAEVIDIPFCVAG 81 D + A+ + + G D DI+ D R ++S+ + E +D+P + G Sbjct: 233 TEDSIHAAQEFVKAGVD---VLDISGGMCMFSIDDQRAGFFDFLSKPIYENVDVPVILTG 289 Query: 82 GIKSLEDAAKILSFG-ADKISINSPALADPTLITRLAD 118 G+K+ ED IL+ G D + I D I Sbjct: 290 GVKTGEDVEDILNRGVCDLVGIGRSVFKDSNWIENEIK 327 >UniRef50_Q5KPM6 Putative uncharacterized protein n=2 Tax=Filobasidiella neoformans RepID=Q5KPM6_CRYNE Length = 407 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 50/160 (31%), Gaps = 9/160 (5%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRL-ADRFGVQCIVVGIDTWYDAETGKYHV 142 KSL DAA+++S D I +N + +V + G Sbjct: 162 KSLADAAELISPYVDGIDLNCGCPQRWAYNEGIGCALLRKPELVRDMVRGVKDRMGW--- 218 Query: 143 NQYTGDESRTRVTQWETLD-WVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVC 200 + ++ E + + + G + ++ + +L +K + Sbjct: 219 -GWPVSIKIRIDSEQEKTEQLISNALQAGISHLTIHGRTRHQPSTDPVNLPGIKFAVDCV 277 Query: 201 H--VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 VP +A+G +E + V G +AA Sbjct: 278 KGEVPCVANGDVWELEDARQMRLHTGVQGVMAARGLLANP 317 >UniRef50_A8J281 Predicted protein (Fragment) n=3 Tax=cellular organisms RepID=A8J281_CHLRE Length = 241 Score = 52.5 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 3/111 (2%) Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 IV + A + + +E D + Q+ GA I L+ + Sbjct: 115 HDIVSAMVAGVRASAAPHTPVSVKLRAGFDDTSLFE--DNLLAAQEAGASFITLHPRTKR 172 Query: 183 GVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +G D + ++ VP+I +G +E R G + Sbjct: 173 QCYDGAADWSLTARAVQLLRVPVIGNGDVVCVERAHALLRQTGCHGVMVGR 223 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 4/105 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + E GA + + T D S +R +++ +P Sbjct: 137 VKLRAGFDDTSLFE--DNLLAAQEAGASFITLHPRTKRQCYDGAADWSLTARAVQLLRVP 194 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRF 120 G + +E A +L G + + A+ DP L R+ F Sbjct: 195 VIGNGDVVCVERAHALLRQTGCHGVMVGRGAVQDPLLFHRIRHSF 239 >UniRef50_D0IYT5 NADH:flavin oxidoreductase/NADH oxidase n=41 Tax=Bacteria RepID=D0IYT5_COMTE Length = 389 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 23/160 (14%) Query: 23 FRNHEIIGDIVPLAKRYAEEG-ADELV--FYDITASSDGRVVD------------KSWVS 67 IGD + L + EEG D L YD+ G+ + + ++ Sbjct: 236 GEGALRIGDALALVDKLVEEGQIDYLHASLYDL---LTGKPQNSGLEDESDKTTAEQFIE 292 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 RVA + P AG I++ + A L+ G +++ + + + LA Q I Sbjct: 293 RVAGRV--PLLAAGQIRTPDQARHALALGLPLVAVGKGLVMNAQWV-ELAHAGRDQEIDT 349 Query: 128 GIDTWYDAETGKYHVNQYTGDES--RTRVTQWETLDWVQE 165 +D +A + + + + E D + Sbjct: 350 ALDMSGEAGDLQVPDKLWAAISATPGWFPIRDEAEDLAEA 389 >UniRef50_UPI0001BCCF0E nifR3 family TIM-barrel protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCCF0E Length = 429 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 31/112 (27%), Gaps = 1/112 (0%) Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 A + V LD + G I L+ +G D Sbjct: 187 VAAAAPFGVPVTMKTRKGIDDDHLTYLDAGHIAEDSGCAAIALHGRTAVQHYSGEADWAA 246 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + ++ +P++ +G L R+ DG + + +L Sbjct: 247 IAALKAAVSIPVLGNGDVWEAADALRMVRETGCDGVVVGRGCLGRPWLFRDL 298 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 2/96 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + + G + + TA D + ++ + + IP G + DA + Sbjct: 213 LDAGHIAEDSGCAAIALHGRTAVQHYSGEADWAAIAALKAAVSIPVLGNGDVWEAADALR 272 Query: 92 IL-SFGADKISINSPALADPTLITRLADRFGVQCIV 126 ++ G D + + L P L LA F + V Sbjct: 273 MVRETGCDGVVVGRGCLGRPWLFRDLAAAFTGEETV 308 >UniRef50_B3E8L6 Dihydrouridine synthase, DuS n=1 Tax=Geobacter lovleyi SZ RepID=B3E8L6_GEOLS Length = 219 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 1/72 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + + G +VL+ G D +V + +P+IA+G T+E L Sbjct: 58 LLPLFESGGVDFLVLHPRTVLQEYKGLADHGITTRVVQETGLPVIANGDVRTVEDGLRVL 117 Query: 221 RDADVDGALAAS 232 G + Sbjct: 118 EQTKAAGLMLGR 129 Score = 45.6 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 5/101 (4%) Query: 29 IGDI---VPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIK 84 D L + G D LV + T + + D +RV + +P G ++ Sbjct: 49 YSDPQQIFSLLPLFESGGVDFLVLHPRTVLQEYKGLADHGITTRVVQETGLPVIANGDVR 108 Query: 85 SLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 ++ED ++L A + + A+ADP L RL Q Sbjct: 109 TVEDGLRVLEQTKAAGLMLGRGAIADPLLFQRLRAGRPDQP 149 >UniRef50_Q47B08 2-nitropropane dioxygenase, NPD n=2 Tax=Proteobacteria RepID=Q47B08_DECAR Length = 334 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 2/100 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAEVIDIP 76 V G + + LA++ A+ GAD LV + G + ++ V + P Sbjct: 124 VHGYGGIVMADVINP-TLARKAADAGADVLVLVTNGAGGHTGSYHPFALIAEVRKFWSGP 182 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +AG I S D GAD + + +A + Sbjct: 183 LGLAGAITSGTDIRAAQLLGADFVLAGTRFIATTESLAEA 222 >UniRef50_Q01YA2 Dihydroorotate dehydrogenase n=5 Tax=Bacteria RepID=PYRD_SOLUE Length = 304 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 21/109 (19%) Query: 35 LAKRYAEEGADELVFYD--ITASSDGR-------------------VVDKSWVSRVAEVI 73 LA+ E GAD L + I+ + D R + +V + A + Sbjct: 177 LARVAEESGADALSLVNTVISLAIDARTRRPRIGAGFGGLSGPAIKPIALRFVYQAARAV 236 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 IP GGI + EDAA+ L GA + + + DP R+A+ G Sbjct: 237 RIPVIGLGGIATGEDAAEFLIAGASAVEVGTATFWDPRAPLRIAEELGK 285 Score = 40.6 bits (94), Expect = 0.051, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 10/80 (12%) Query: 183 GVRNGYDLEQLK-----KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 G +G ++ + + +P+I GG T E E A + Sbjct: 214 GGLSGPAIKPIALRFVYQAARAVRIPVIGLGGIATGEDAAEFLI-AGASAVEVGTATFWD 272 Query: 238 IINI----GELKAYLATQGV 253 EL +L +G+ Sbjct: 273 PRAPLRIAEELGKFLEREGI 292 >UniRef50_Q26HI8 Putative PcrB family protein n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26HI8_9BACT Length = 242 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 39/117 (33%), Gaps = 9/117 (7%) Query: 3 AKRIIPC--LDVRDG-----QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS 55 I+P L + G Q V Q + IV A G + + + Sbjct: 127 KLEIVPTGYLLIDGGHESAVQRVSQTQPLPQNDVDSIVHTAFAGQLMGNQLIYLEAGSGA 186 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 +D + V +DIP V GG++SL+ GAD + I + Sbjct: 187 ITS--IDPEVIKSVKNQLDIPLIVGGGLRSLQQLESSFLAGADMLVIGTAIEQKINW 241 >UniRef50_A8VQT3 Transposase IS3/IS911 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQT3_9BACI Length = 318 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 5/108 (4%) Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 G+D + Q+ ++ + + Q+ GA +V+ G G Sbjct: 93 GVDFIISGAGISRDMYQWGKAHDTPVLSIVSSAKLAKMSQRLGAAAVVVEGHEAGGHL-G 151 Query: 188 YDL---EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 D + L +V E +P+IA+GG + E E G + Sbjct: 152 TDRSVKDILPEVAEAVTIPVIAAGGVMSGEDIREMI-SLGASGVQMGT 198 Score = 46.8 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Query: 33 VPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 LAK GA +V ++ K + VAE + IP AGG+ S ED Sbjct: 125 AKLAKMSQRLGAAAVVVEGHEAGGHLGTDRSVKDILPEVAEAVTIPVIAAGGVMSGEDIR 184 Query: 91 KILSFGADKISINSPALADPTL 112 +++S GA + + + +A Sbjct: 185 EMISLGASGVQMGTRFVATEEC 206 >UniRef50_B0ESC7 tRNA-dihydrouridine synthase, putative n=2 Tax=Entamoeba RepID=B0ESC7_ENTDI Length = 515 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 15/197 (7%) Query: 57 DGRVVDKSWVSR--VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD----P 110 +G+ + + V R ++ I CV + + + + S D +N D Sbjct: 209 EGKTSEWALVKRDPSEDIFGIQLCVGNSLLAAKACQVLNSVDCDFYELNCACPIDYVYKK 268 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + +L +R + I + + TG S T + G Sbjct: 269 GMGAQLIER--PKRIESLLHAMRSVTERPVAIKVRTGKSSNTIQDV-----LLPNCANYG 321 Query: 171 AGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 A + ++ +D D + +K+ + P+I G + + +A V Sbjct: 322 AAMVSIHGRTRDQRYTKSADWDFIKQATTITQCPVIGVGDIYGYKDYQKALEC-GVATVA 380 Query: 230 AASVFHKQIINIGELKA 246 + E+K Sbjct: 381 IGRGALIKPWIYTEIKE 397 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 1/81 (1%) Query: 40 AEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD 98 A GA + + T + D ++ + + P G I +D K L G Sbjct: 318 ANYGAAMVSIHGRTRDQRYTKSADWDFIKQATTITQCPVIGVGDIYGYKDYQKALECGVA 377 Query: 99 KISINSPALADPTLITRLADR 119 ++I AL P + T + ++ Sbjct: 378 TVAIGRGALIKPWIYTEIKEK 398 >UniRef50_Q39G69 NADH-flavin oxidoreductase/NADH oxidase n=13 Tax=cellular organisms RepID=Q39G69_BURS3 Length = 372 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 3/84 (3%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG 96 + E G + D G + V + V GGI S + A K++ G Sbjct: 257 RMLDEAGVAYVHAADTNG-WSGEPDLPRIIEIVRKSFGGALIVNGGI-SPDVATKLIMSG 314 Query: 97 -ADKISINSPALADPTLITRLADR 119 AD ++ +A+P L+ R+A++ Sbjct: 315 DADLVAFARAYIANPDLVERIANK 338 >UniRef50_B6JXB4 tRNA-dihydrouridine synthase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JXB4_SCHJY Length = 347 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPL 204 + R +T +Q ++ GA I ++ + + DLE ++ VR +P+ Sbjct: 146 VEVKIRLDNDLEKTRQLMQTAERAGADFITVHGRRRADRSSFPVDLEAIRSVRPCVSIPV 205 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +A+G ++ L+ + DG ++A + Sbjct: 206 VANGDVNDLDTGLKIAEYTNTDGVMSARGLMENP 239 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%) Query: 40 AEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPFCVAGGIKSLED-AAKILSFGA 97 GAD + + + VD + V + IP G + L+ Sbjct: 167 ERAGADFITVHGRRRADRSSFPVDLEAIRSVRPCVSIPVVANGDVNDLDTGLKIAEYTNT 226 Query: 98 DKISINSPALADPTLIT 114 D + + +P L Sbjct: 227 DGVMSARGLMENPALFA 243 >UniRef50_Q6MQA5 2-nitropropane dioxygenase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQA5_BDEBA Length = 341 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 9/86 (10%) Query: 33 VPLAKRYAEEGADELVFYDITA------SSDGRVVDKS---WVSRVAEVIDIPFCVAGGI 83 + A+ ++G D +V + A DG+ V ++E IP AGGI Sbjct: 155 LEEAEYLQKQGCDAVVAQGLEAGGHRGSFLDGKFPLLPAKNLVQEISERFQIPVIAAGGI 214 Query: 84 KSLEDAAKILSFGADKISINSPALAD 109 S D +LS GA + I + L Sbjct: 215 VSKADMQTMLSAGAVAVQIGTAFLVC 240 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 50/179 (27%), Gaps = 23/179 (12%) Query: 72 VIDIPFCVAGGIKSLEDAAKIL-----SFGADKISINSPALADPTLI-TRLADRFGVQCI 125 + IP A + +E K+L G D + DP L + A + Sbjct: 68 NLFIPTSPAVDLLQVERMKKLLLPFYRELGMDSV---PELSYDPDLFQKQFAVVLEEKVP 124 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + + T + E QK+G +V + G R Sbjct: 125 AFSFTFGCLKPSEMAALKSLNVFVMGTATSLEEAEYL----QKQGCDAVVAQGLEAGGHR 180 Query: 186 NG---------YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++++ E +P+IA+GG + A + F Sbjct: 181 GSFLDGKFPLLPAKNLVQEISERFQIPVIAAGGIVSKADMQTML-SAGAVAVQIGTAFL 238 >UniRef50_C0QXB6 Dihydrouridine synthase-like (DUS-like) FMN-binding domain protein n=2 Tax=Brachyspira RepID=C0QXB6_BRAHW Length = 325 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 3/95 (3%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVP--LIASGGAGTMEHF 216 ++ +++ GA + L+ + G D E + K++E LI +G + E Sbjct: 156 IERALAMKENGACFLTLHGRYASDMYRGTADWEAIAKIKEALGEDYILIGNGDIKSKEDA 215 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 ++AF + VDG + EL Sbjct: 216 VKAFDISKVDGIMVGRGAIGNPWIFTELNTIFEDN 250 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 4/96 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI--DIPFCVAGGIKSLEDA 89 + A E GA L + AS R D ++++ E + D G IKS EDA Sbjct: 156 IERALAMKENGACFLTLHGRYASDMYRGTADWEAIAKIKEALGEDYILIGNGDIKSKEDA 215 Query: 90 AKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 K D I + A+ +P + T L F Sbjct: 216 VKAFDISKVDGIMVGRGAIGNPWIFTELNTIFEDND 251 >UniRef50_A6DU09 Dihydrouridine synthase family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DU09_9BACT Length = 334 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 49/137 (35%), Gaps = 7/137 (5%) Query: 113 ITRLADRFGVQCIVVGIDTWYDAE-TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + ++ + G ++ + + K ++RT +T +T +W+ + + Sbjct: 118 VAKIVKQGGCSALINTPEIAKELVLAAKAATKLPVSVKTRTGITAHKTEEWMTHLLEVEP 177 Query: 172 GEIVLNMMNQDGVRNG-YDLEQLKKVRE-----VCHVPLIASGGAGTMEHFLEAFRDADV 225 I+L+ Q G +++ K H+P +G ++E + ++ + Sbjct: 178 AAIILHGRTQKQQSEGLASWDEIAKGARVRDRLKPHIPFWGNGDVRSIEQAHQLCQEHKL 237 Query: 226 DGALAASVFHKQIINIG 242 DGA+ Sbjct: 238 DGAMIGRGVFHNPWIFN 254 >UniRef50_D0LY25 TIM-barrel protein, yjbN family n=3 Tax=Bacteria RepID=D0LY25_HALO1 Length = 376 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 43/130 (33%), Gaps = 17/130 (13%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-- 58 M A IP V + + + D+ + AE GAD + A G Sbjct: 157 MRAAVAIPV------TVKHRIGIDDRDRYEDMREFVRVVAEAGADRFSVHARKAWLSGLS 210 Query: 59 RVVDKSW-------VSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 ++ V R+ +P + GGI L+ A + L D + I A P Sbjct: 211 PKENREVPPLRYADVHRLKREFPHLPIEINGGIVDLDSAQEQL-AHVDAVMIGRAAYNTP 269 Query: 111 TLITRLADRF 120 + RF Sbjct: 270 WIFAEADARF 279 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 64/191 (33%), Gaps = 30/191 (15%) Query: 74 DIPFCVAGGIKSLED----AAKILSFGADKISI----NSPALADPTLITRLADRFGVQCI 125 I + G E A +G D++++ S ++ + L R + + Sbjct: 95 PIALQLGGD--DAEALATCARIAEDWGYDEVNLNVGCPSSRVSSGSFGACLMAR--PEVV 150 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 ++ A V G + R R + ++V+ V + GA ++ + Sbjct: 151 ARAVEAMRAAVAIPVTVKHRIGIDDRDRY--EDMREFVRVVAEAGADRFSVH--ARKAWL 206 Query: 186 NGYDLEQLKKV------------REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +G ++ ++V RE H+P+ +GG ++ E VD + Sbjct: 207 SGLSPKENREVPPLRYADVHRLKREFPHLPIEINGGIVDLDSAQEQLAH--VDAVMIGRA 264 Query: 234 FHKQIINIGEL 244 + E Sbjct: 265 AYNTPWIFAEA 275 >UniRef50_B3QW78 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW78_CHLT3 Length = 256 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 2/70 (2%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 A G + + + + V V + + +P V GGI+S + + Sbjct: 164 ALAAEYLGMKMIYLEAGSGADESVPE--EMVELVCQTVSLPVIVGGGIRSAQAVRSKVDA 221 Query: 96 GADKISINSP 105 GA + + + Sbjct: 222 GASFVVVGNA 231 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 66/220 (30%), Gaps = 23/220 (10%) Query: 24 RNHEIIGDIVP-LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 + + + K GAD + S ++V ++ D+P + G Sbjct: 27 DPDKYDASGLEQVVKNATAFGADGFLI---GGSLLFSNRFDAYVQQIKSATDLPVILFPG 83 Query: 83 IKSLEDAAKILSFGADKISINSPAL-ADPTLI-------TRLADRFGVQCIVVGIDTWYD 134 S++ +S AD I S +P + FG++ + Sbjct: 84 -HSVQ-----ISPSADAILFLSLLSGRNPEFLIGHHVTAAPSIKAFGLESMPTA--YLLV 135 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 K V + E R + G I L G E ++ Sbjct: 136 ESGRKTAVEFMSNTEPIPRHKPELAAVHALAAEYLGMKMIYLE--AGSGADESVPEEMVE 193 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 V + +P+I GG + + + + DA + + F Sbjct: 194 LVCQTVSLPVIVGGGIRSAQ-AVRSKVDAGASFVVVGNAF 232 >UniRef50_C9KQV9 NADH:flavin oxidoreductase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQV9_9FIRM Length = 368 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 4/126 (3%) Query: 28 IIGDIVPLAKRYAEEGADELVF--YD-ITASSDGRVVDKSWVSRVAEVI-DIPFCVAGGI 83 D+V L +R G + + F D I + V R++ + D+P + GG+ Sbjct: 227 YHRDMVWLLRRAKALGVELVEFSGVDFINLPKTATLYYLPQVKRLSAEVPDMPLSLVGGV 286 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 +SL D ++ G + +S+ +A+P +T+ V + Sbjct: 287 RSLADMEAVIKAGIECVSLGRSLIAEPDFVTKELAGGEKSICVSCSRCFVLPHMHPGIRC 346 Query: 144 QYTGDE 149 + + Sbjct: 347 VWAWKK 352 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 57/167 (34%), Gaps = 19/167 (11%) Query: 86 LEDAAKILSFGADKISINSP------ALADPTLITR-------LADRFGVQCIVVGIDTW 132 +E A ++ S G D + +++ DPT R + +RF + ++ Sbjct: 144 IEAAKRLQSAGCDGVQLHAAHSYLLSRFIDPTFNQREDEYGGTIENRFRMVEEIICGIHG 203 Query: 133 YDAETGKYHVNQYTGDE-SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG---VRNGY 188 + + + + + ++ + G + + ++ Y Sbjct: 204 ACGKDFPVLIKVNVDTKAEDAEGYHRDMVWLLRRAKALGVELVEFSGVDFINLPKTATLY 263 Query: 189 DLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 L Q+K++ EV +PL GG ++ EA A ++ Sbjct: 264 YLPQVKRLSAEVPDMPLSLVGGVRSLADM-EAVIKAGIECVSLGRSL 309 >UniRef50_C4V1R4 N-acylglucosamine-6-phosphate 2-epimerase n=4 Tax=Bacteria RepID=C4V1R4_9FIRM Length = 223 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 35/206 (16%) Query: 35 LAKRYAEEGADEL---VFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 +A+ E GA + DI ++ + + +I ++ +A Sbjct: 32 MARAAKEGGAVGIRAQSVADIDEIRAVTQLPVIGLIKQTYADSEIYITA-----TMREAE 86 Query: 91 KILSFGADKISINSPALADPT--LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 ++ G + I+++ P + L R +V D E K D Sbjct: 87 ALIGTGCEMIALDMTNRERPQGTDVRDLIARIHAAHRLVLADISTYEEGMKAAELG--AD 144 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 T ++ + G D ++++ + VP+ A G Sbjct: 145 AVSTTMSGYTPY---------------------SPQIAGPDFALMRRLAKDAPVPVFAEG 183 Query: 209 GAGTMEHFLEAFRDADVDGALAASVF 234 T E +EA + V GA+ S Sbjct: 184 RINTPEELVEAMQ-TGVFGAIVGSAI 208 >UniRef50_B4RXY6 Oxidoreductase, FMN-binding protein n=7 Tax=Bacteria RepID=B4RXY6_ALTMD Length = 389 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 19/114 (16%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITA------SSDGRVVD----------KSWVSRVAEV 72 D + R G D +++ + G+ D + + Sbjct: 221 FDDACEVVNRLEALGVD---VVELSGGSYEAPAMQGQTRDDTTLAREAYFLEFAHALESK 277 Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 DIP GGIK E A +++ G + + + S P L + + I+ Sbjct: 278 TDIPLMTTGGIKRAEVAERVIQQGCELVGLASALAITPDLAKKWQQEWSYSGII 331 >UniRef50_B8DSX5 Possible NifR3-like protein n=15 Tax=Bifidobacterium RepID=B8DSX5_BIFA0 Length = 417 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 27/232 (11%), Positives = 65/232 (28%), Gaps = 22/232 (9%) Query: 40 AEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE--DAAKILSFGA 97 E G D L ++ + + + I+SL+ + A Sbjct: 70 EEYGPDGLYVAEMVTARALVERNPKALRLCRFAPSER------IRSLQLYGVNPSIMEQA 123 Query: 98 DKISINSPALADPTL-----ITRLADRFGVQCIVVGIDT------WYDAETGKYHVNQYT 146 + +++ + L + ++ R G + D A ++ Sbjct: 124 ARFLVDNGMMDHLDLNFGCPVPKVTRRGGGSALPWKTDLFTEIVQRVVAVCEPANIPVTA 183 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLI 205 L+ + Q+ G + L+ G+ D ++ ++ +P+ Sbjct: 184 KIRVGLDHEHETFLEAGRIAQEEGCSAVTLHARTTAEYYGGHSDWCRIGELVSTLDIPVF 243 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 +G E + + G + G + G ++RI Sbjct: 244 GNGDIWGAEDAIAMVNETGCAGVAIGRGCQGRPWLFGNIGNAF--AGSDVRI 293 >UniRef50_B9PN28 tRNA-dihydrouridine synthase, putative n=3 Tax=Toxoplasma gondii RepID=B9PN28_TOXGO Length = 1220 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 59/168 (35%), Gaps = 15/168 (8%) Query: 18 VKGV---QFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVI 73 VK Q + + +R + GA L+ + TA + D S+V++ E + Sbjct: 951 VKLRTANQGKKQVLHS----FIRRLGDAGAAALIVHGRTAQQRYTKAADWSYVAQCREAL 1006 Query: 74 D--IPFCVAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADRFGVQCIVVGID 130 D P G I S + L+ GA D + I AL P + T +++R V I Sbjct: 1007 DSSTPLIGCGDIFSSPEFEFRLASGASDGLMIARAALVKPWVFTEISER-KVWDISASER 1065 Query: 131 TWYDAETGKYHVNQYTGDESRTRVT---QWETLDWVQEVQKRGAGEIV 175 ++ + + D T E L + E + Sbjct: 1066 LDLLKRFVRFGLEHWGSDSRGVATTRRFLLELLSFQHRYVPPPFFEFL 1113 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 21/206 (10%) Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE------DAAKILSFGADKISINSPALA 108 DG+ + S + R +AGG + E D D I +N+ Sbjct: 856 IVDGKQSELSLLKRHKSETFFGVQIAGG--TPEVLNACTDILASEDVSCDFIDLNAACP- 912 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKY-----HVNQYTGDESRTRVTQWETLDWV 163 + +L RF ++ ++ V + + + ++ Sbjct: 913 ----LVQLHRRFKAGACMLDHPKRLESLVESMTTRHPEVPVTVKLRTANQGKKQVLHSFI 968 Query: 164 QEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAF 220 + + GA ++++ D + + RE PLI G + F Sbjct: 969 RRLGDAGAAALIVHGRTAQQRYTKAADWSYVAQCREALDSSTPLIGCGDIFSSPEFEFRL 1028 Query: 221 RDADVDGALAASVFHKQIINIGELKA 246 DG + A + E+ Sbjct: 1029 ASGASDGLMIARAALVKPWVFTEISE 1054 >UniRef50_Q466J2 NADH-dependent flavine oxidoreductase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q466J2_METBF Length = 325 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 39/127 (30%), Gaps = 16/127 (12%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK---SWVS------ 67 +V D + AK + + G D L + + ++ Sbjct: 188 IVSVRMGEYLPESKDGIEAAKAFEKAGIDLLHI----SFGMQPPANTVPDGFICSPITYS 243 Query: 68 --RVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQC 124 ++ + + IP I++ E ++ D +++ LADP + + V Sbjct: 244 GCKIKKEVKIPVIAVNEIRTEEQVRFLIENDYVDLVAVGRGMLADPEFANHVINSEPVNT 303 Query: 125 IVVGIDT 131 + Sbjct: 304 CLGCERC 310 >UniRef50_Q9CJW1 tRNA-dihydrouridine synthase C n=7 Tax=Gammaproteobacteria RepID=DUSC_PASMU Length = 312 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 24/182 (13%), Positives = 53/182 (29%), Gaps = 32/182 (17%) Query: 86 LEDAAKILSFGADKISINSP--------------ALADPTLITRLADRFGVQCIVVGIDT 131 E+A + + G+ I +N L P LI Sbjct: 78 AENAQRAIELGSHGIDLNCGCPSKTVNGSNGGASLLKQPELIYHATKALRAA-------- 129 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YD 189 + V G ++ + + VQ+ GA EI ++ + + Sbjct: 130 --VPKALPVSVKVRLGWDNSEQ-----AFEIADAVQQGGATEITIHGRTKMDGYRADRIN 182 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 ++ VR+ +P+IA+G + + + N+ ++ + Sbjct: 183 WAKINDVRQRLSIPVIANGEIWDWQSGQACLAETGCQDLMIGRGALNIP-NLSQVVKFNQ 241 Query: 250 TQ 251 + Sbjct: 242 AK 243 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 7/99 (7%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI---TASSDGRVVDKSWVSRVAEVID 74 VK ++ +A + GA E+ + R ++ + ++ V + + Sbjct: 138 VKVRLGWDN--SEQAFEIADAVQQGGATEITIHGRTKMDGYRADR-INWAKINDVRQRLS 194 Query: 75 IPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTL 112 IP G I + L G + I AL P L Sbjct: 195 IPVIANGEIWDWQSGQACLAETGCQDLMIGRGALNIPNL 233 >UniRef50_C4QAZ6 tRNA-dihydrouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4QAZ6_SCHMA Length = 492 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 10/90 (11%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDK---SWVSRVAEVIDIPFCVAGG----IKS 85 + LAK G + + T + R V + + +A + IP GG I++ Sbjct: 148 IALAKLIESTGVAAITVHGRT--INERPVHRNRNEVIQTIANSVGIPVLANGGSHDIIRN 205 Query: 86 LEDAAKILS-FGADKISINSPALADPTLIT 114 ED A + I A+++P + Sbjct: 206 HEDIEYFRQLTSAAGVVIARAAMSNPAIFK 235 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 29/82 (35%), Gaps = 5/82 (6%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGG----AG 211 +T+ + ++ G I ++ + + E ++ + +P++A+GG Sbjct: 145 EKTIALAKLIESTGVAAITVHGRTINERPVHRNRNEVIQTIANSVGIPVLANGGSHDIIR 204 Query: 212 TMEHFLEAFRDADVDGALAASV 233 E + G + A Sbjct: 205 NHEDIEYFRQLTSAAGVVIARA 226 >UniRef50_A6GHV6 Dihydrouridine synthase family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHV6_9DELT Length = 321 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 29/101 (28%), Gaps = 4/101 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIP 76 VK E +V +A+ GA L + T VD + R + + Sbjct: 135 VKIRVGW--EDPSPVVEIARAAEAGGASWLTIHGRTRRQLYKPPVDYEAIGRAQAAVSMA 192 Query: 77 FCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRL 116 G + + G I A+ P L R Sbjct: 193 VVANGDLFGVPSLFEAAQRSGCTAFMIGRGAMGRPELFARA 233 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/172 (10%), Positives = 51/172 (29%), Gaps = 12/172 (6%) Query: 68 RVAEVIDIPFCVAGGI-----KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + + + GG ++ E A + + G D + + + Sbjct: 55 KTRAGVPVFVQLLGGEPHWMARAAETAVALGAPGIDLNFGCPAKTVNSSDGGATLLKDPC 114 Query: 123 QCIVVGIDTWY-DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V V G E + ++ + + GA + ++ + Sbjct: 115 RVEAVTRAVRAAVPAELPVTVKIRVGWEDPS-----PVVEIARAAEAGGASWLTIHGRTR 169 Query: 182 DGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + D E + + + + ++A+G + EA + + + Sbjct: 170 RQLYKPPVDYEAIGRAQAAVSMAVVANGDLFGVPSLFEAAQRSGCTAFMIGR 221 >UniRef50_C7GEK5 NADH:flavin oxidoreductase, Old Yellow Enzyme family n=12 Tax=Bacteria RepID=C7GEK5_9FIRM Length = 644 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 26/139 (18%) Query: 4 KRIIP--CLDVRDGQVVKG----VQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD 57 K I+P +D + V + + + AK G D L A ++ Sbjct: 203 KTIVPDMVIDYKLPIVTPLGENSFRGKGGLPFDEACIFAKELEACGVDTLHV----AQAN 258 Query: 58 GRVVDKSWV---------------SRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKIS 101 + ++ E++ IP V G I + E A +++ G AD I Sbjct: 259 HTGNMGDTIPAMGTQPYGFMVSYSKKIKELVSIPVSVVGRIVTPEAAEAVIANGSADIIG 318 Query: 102 INSPALADPTLITRLADRF 120 + L DP + AD Sbjct: 319 LGRSLLTDPDFANKCADGH 337 >UniRef50_UPI000180C428 PREDICTED: similar to tRNA-dihydrouridine synthase 2-like (hDUS2) (Up-regulated in lung cancer) (URLC8) n=1 Tax=Ciona intestinalis RepID=UPI000180C428 Length = 482 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 35/118 (29%), Gaps = 24/118 (20%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VV 61 RI+P +D + L + G L + R V Sbjct: 201 KIRILPEID-------------------KTLELVRIIESTGVAALAVHGRYKHERPRHPV 241 Query: 62 DKSWVSRVAEVIDIPFCVAGG---IKSLEDAAKI-LSFGADKISINSPALADPTLITR 115 + + E + IP GG I +D K S A + + A + ++ + Sbjct: 242 HCDVIKAITETVKIPVIANGGSSNIACYDDIEKFRASTNASSVMLARSAQWNCSVFRK 299 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 31/79 (39%), Gaps = 4/79 (5%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL-EQLKKVREVCHVPLIASGG---AGTM 213 +TL+ V+ ++ G + ++ + + +K + E +P+IA+GG Sbjct: 210 KTLELVRIIESTGVAALAVHGRYKHERPRHPVHCDVIKAITETVKIPVIANGGSSNIACY 269 Query: 214 EHFLEAFRDADVDGALAAS 232 + + + + A Sbjct: 270 DDIEKFRASTNASSVMLAR 288 >UniRef50_A4RVX6 Predicted protein n=2 Tax=Ostreococcus RepID=A4RVX6_OSTLU Length = 371 Score = 51.0 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 2/87 (2%) Query: 34 PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 E GA + + T + + ++ +V+DIP G + S + AA++ Sbjct: 156 ENLLAAREAGARFVSLHARTRAQGYSGRANWEEIAFAKDVLDIPVLGNGDVTSPQRAAEL 215 Query: 93 LS-FGADKISINSPALADPTLITRLAD 118 L AD I + A+ DP + R+A Sbjct: 216 LRVSDADGIMLGRGAVQDPLIFRRIAA 242 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 40/104 (38%), Gaps = 2/104 (1%) Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETL-DWVQEVQKRGAGEIVLNMMNQDGVRNG-Y 188 G + + R+ L + + ++ GA + L+ + +G Sbjct: 125 CVKAVADGARGSGAHVTMKLRSGYDDSSLLRENLLAAREAGARFVSLHARTRAQGYSGRA 184 Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + E++ ++V +P++ +G + + E R +D DG + Sbjct: 185 NWEEIAFAKDVLDIPVLGNGDVTSPQRAAELLRVSDADGIMLGR 228 >UniRef50_UPI000058804E PREDICTED: similar to MGC53781 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI000058804E Length = 655 Score = 51.0 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 57/194 (29%), Gaps = 3/194 (1%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKILSFGADKISINSPALADPTLIT 114 G+ + + + R + GG ++ A++L+ D I+ L+ Sbjct: 320 LQGQSSEWALLRRHPSEDIFGVQLCGGFPDTMTRCAELLNDRLDIDFIDINVGCPIDLVY 379 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 G+ + + + + V+ + GA + Sbjct: 380 HKGAGSGLMNRMGKFQEIVRGMSSVLDIPLTVKMRTGVHNDNPVAHKIVRRIYDWGASVV 439 Query: 175 VLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ ++ + D + LK + P I +G + E + G + A Sbjct: 440 TVHGRTREQRYSKLADWDYLKDCVQAADPHPFIGNGDILSYEDSNFFREQSGATGQMIAR 499 Query: 233 VFHKQIINIGELKA 246 + E+K Sbjct: 500 GALIKPWIFTEIKE 513 >UniRef50_D1SCC9 N-acylglucosamine-6-phosphate 2-epimerase n=4 Tax=Actinomycetales RepID=D1SCC9_9ACTO Length = 237 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 49/175 (28%), Gaps = 23/175 (13%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 V V +D+P + G + I A + G Sbjct: 53 DDVRAVRAAVDVPVIG------------LYKHGTQGVFITPTAGHALEAVRA-----GSH 95 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ--KRGAGEIVLNMMNQ 181 + V + + E + + + V + GA + + Sbjct: 96 VVAVDATDRRRPDGRTFADTVRAVHEQSDALVLADVATVAEGVAAVEAGADAVATTLSGY 155 Query: 182 DGVR---NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +G DL + ++ + VP+IA G T E AF +A + + Sbjct: 156 TPAGPPIDGPDLGLVARLAALLPVPVIAEGRYRTTEQISRAF-EAGAHAVVMGNA 209 >UniRef50_B8D5Y6 Geranylgeranylglyceryl phosphate synthase-like protein n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5Y6_DESK1 Length = 248 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 2/87 (2%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 ++ A G L + + + V + ++ V GGI+S + A + Sbjct: 157 VLAYALAAEMMGFKLLYLEAGSGAQSHIPPAFPGI--VKKHTELITMVGGGIRSPDAALE 214 Query: 92 ILSFGADKISINSPALADPTLITRLAD 118 ++ GAD I + DP + Sbjct: 215 LIRAGADIIVTGTIMEKDPERGVNIIK 241 >UniRef50_Q8TVJ8 Indole-3-glycerol phosphate synthase n=1 Tax=Methanopyrus kandleri RepID=TRPC_METKA Length = 254 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 73/234 (31%), Gaps = 37/234 (15%) Query: 22 QFR-NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA 80 Q R D+ A+ Y GA + DGR +V V E +D+P Sbjct: 51 QGRLRDVDAEDVAERARAYERGGAAGISVLTEPEFFDGRP---EYVEVVREAVDVPV--- 104 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 + + DP + + +G +++ Sbjct: 105 ---------------------LRKDFIIDPVQVEE-SAHYGADAVLIIAAAVGREAPELI 142 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD--LEQLKKVRE 198 + G E + +WE L+ + E G +N + + + LE +V++ Sbjct: 143 DLAHEHGMEVLLEIDRWEHLELLSECDPDVVG---VNNRDLRTLEVDLNRTLELGPEVKD 199 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + + PL+A G E + + D L + + + E L G Sbjct: 200 LTNAPLVAESGVSGPEDVV-LLGEV-ADAVLVGTYLMRAP-DPSEAVRKLVEAG 250 >UniRef50_Q17M24 tRNA-dihydrouridine synthase n=2 Tax=Diptera RepID=Q17M24_AEDAE Length = 578 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 40/104 (38%), Gaps = 3/104 (2%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKK-VREVCHVP 203 ++ + V + ++ GA + ++ ++ D + +++ ++ +P Sbjct: 361 VKTRMGIYANKYVAHELVPKFEEWGASLVTIHGRTKEQRYTKKADWDYIRQCAQQAKSIP 420 Query: 204 LIASGGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELKA 246 + +G + +L+A A ++ G + + E+K Sbjct: 421 IYGNGDIFCYQDYLDAKERAPELAGVMVGRGALIKPWVFQEIKE 464 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 7/147 (4%) Query: 34 PLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAK 91 L ++ E GA + + T + D ++ + A+ IP G I +D Sbjct: 376 ELVPKFEEWGASLVTIHGRTKEQRYTKKADWDYIRQCAQQAKSIPIYGNGDIFCYQDYLD 435 Query: 92 ILSFGAD--KISINSPALADPTLITRLADRFGVQCIVVG-IDTWYDAETGKYHVNQYTGD 148 + + + AL P + + ++ + +D Y + + D Sbjct: 436 AKERAPELAGVMVGRGALIKPWVFQEIKEQKNLDPSSSERMDMLKRYVN--YGLEHWGSD 493 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIV 175 T+ L+W + + ++ Sbjct: 494 TKGVENTRRFLLEWQSFLYRYVPSGLL 520 >UniRef50_Q582L4 TRNA-dihydrouridine synthase 3, putative n=5 Tax=Trypanosomatidae RepID=Q582L4_9TRYP Length = 528 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 3/81 (3%) Query: 39 YAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA--AKILSF 95 Y GA + + + ++ + S++ A + +P G I S ED + S Sbjct: 317 YETWGAAAVTIHGRSRRQRYTKLANWSYIDNCASLTSLPVIGNGDIFSCEDIVEHRAQSK 376 Query: 96 GADKISINSPALADPTLITRL 116 I AL P + + Sbjct: 377 NVSSFMIGRGALVKPWIFEEI 397 Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 31/85 (36%), Gaps = 2/85 (2%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLE-AF 220 + + + GA + ++ ++ + + + +P+I +G + E +E Sbjct: 314 IADYETWGAAAVTIHGRSRRQRYTKLANWSYIDNCASLTSLPVIGNGDIFSCEDIVEHRA 373 Query: 221 RDADVDGALAASVFHKQIINIGELK 245 + +V + + E+K Sbjct: 374 QSKNVSSFMIGRGALVKPWIFEEIK 398 >UniRef50_B1ZZ77 Dihydrouridine synthase DuS n=2 Tax=Opitutaceae RepID=B1ZZ77_OPITP Length = 384 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 4/107 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIP 76 VK + + + D L + T V +++R + + P Sbjct: 147 VKMRIGFDDTTPFEP--MLDLVNAHRVDLLSVHGRTVKEMYRSRVHYDFIARAVQRVRCP 204 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGV 122 G + S A IL GA + I A+ +P + + + F Sbjct: 205 VLANGNVTSAPRAVAILRETGAAGVMIGRHAIRNPWIFRQCRELFHP 251 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 6/66 (9%), Positives = 23/66 (34%) Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++ R+ + + + + P++A+G + + R+ G + + Sbjct: 182 KEMYRSRVHYDFIARAVQRVRCPVLANGNVTSAPRAVAILRETGAAGVMIGRHAIRNPWI 241 Query: 241 IGELKA 246 + + Sbjct: 242 FRQCRE 247 >UniRef50_UPI0001792282 PREDICTED: similar to tRNA-dihydrouridine synthase n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792282 Length = 578 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 43/131 (32%), Gaps = 7/131 (5%) Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + V + + V +G V D + + G I ++ ++ Sbjct: 340 SKKLEVCLKSMRTVLDVPLTVKTRSGVNKDQNV----AHDLIPMFKDSGVSLITVHGRSR 395 Query: 182 DGVRN-GYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLE-AFRDADVDGALAASVFHKQI 238 D D + + + V + +SG + E +++ + D+ GA+ + Sbjct: 396 DQRYTKMADWNYVNECAKLASPVQVFSSGDIMSYEDYVDSKLQFPDITGAMIGRGALIKP 455 Query: 239 INIGELKAYLA 249 ELK Sbjct: 456 WIFKELKENCH 466 >UniRef50_C5FBD9 tRNA-dihydrouridine synthase 1 n=1 Tax=Microsporum canis CBS 113480 RepID=C5FBD9_NANOT Length = 573 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 6/140 (4%) Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH-VNQYTGDESRTRVTQ 156 D+ I +P + R A C D Y + ++ + R T+ Sbjct: 164 DRPLIVQFCANNPDELLRAARHVEGYCDAEDPDLIYKLINKLHAELSIPVTAKFRILETK 223 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQD--GVRNGY-DLEQLKKVR-EVCHVPLI-ASGGAG 211 +TL++ + + GA + ++ ++ G G + E ++ +R + +I A+G Sbjct: 224 EKTLEYAKMILSAGASILSVHGRRREQKGHNTGVANWEYIRYLRDNLPPETVIFANGNIL 283 Query: 212 TMEHFLEAFRDADVDGALAA 231 + DG ++A Sbjct: 284 NHGDIRDCLESTGADGVMSA 303 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 6/98 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IP 76 +FR E + AK GA L + G + ++ + + + Sbjct: 216 KFRILETKEKTLEYAKMILSAGASILSVHGRRREQKGHNTGVANWEYIRYLRDNLPPETV 275 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLI 113 G I + D L GAD + L+DPT+ Sbjct: 276 IFANGNILNHGDIRDCLESTGADGVMSAEGNLSDPTIF 313 >UniRef50_D1AMN2 Dihydrouridine synthase DuS n=3 Tax=Bacteria RepID=D1AMN2_SEBTE Length = 337 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 23/180 (12%) Query: 93 LSFGA--DKI---SINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 L+ G D++ + + +A P L+ + GK + Sbjct: 91 LNVGCPSDRVSGNMMGACLMAYPELVLDILKAIKEATGKAVTIKHRIGIDGKGILPDNAE 150 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL------------EQLKK 195 + + L+++ ++K GA ++ + V G D E + Sbjct: 151 KTLFDKY--EDMLNFINIIEKAGADRYTVH--ARIAVLAGLDPKQNREVPPLRYDEVYRL 206 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 E ++ + +GG T E E + VDG + F+ + + E+ ++ I Sbjct: 207 KAEKPYMQIEINGGIKTKEDITEHLKY--VDGVMIGREFYDNPMLLAEVNSFYNNGEENI 264 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 11/106 (10%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRV-AEVIDIPFC 78 D++ + GAD + A G + V R+ AE + Sbjct: 157 YEDMLNFINIIEKAGADRYTVHARIAVLAGLDPKQNREVPPLRYDEVYRLKAEKPYMQIE 216 Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 + GGIK+ ED + L + D + I +P L+ + + Sbjct: 217 INGGIKTKEDITEHLKY-VDGVMIGREFYDNPMLLAEVNSFYNNGE 261 >UniRef50_D1NSS9 Putative tRNA-dihydrouridine synthase n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSS9_9BIFI Length = 422 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 27/91 (29%), Gaps = 1/91 (1%) Query: 161 DWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 + Q+ G + L+ G+ D ++ ++ E VP+ +G L Sbjct: 203 EAGHIAQEEGCKAVTLHARTTAEYYGGHSDWSRIGELVEQLDVPVFGNGDIWGAADALAM 262 Query: 220 FRDADVDGALAASVFHKQIINIGELKAYLAT 250 G + ++K A Sbjct: 263 VEQTGCAGVAIGRGCQGRPWLFADIKHAFAG 293 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 2/93 (2%) Query: 34 PLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 EEG + + T + G D S + + E +D+P G I DA + Sbjct: 203 EAGHIAQEEGCKAVTLHARTTAEYYGGHSDWSRIGELVEQLDVPVFGNGDIWGAADALAM 262 Query: 93 LS-FGADKISINSPALADPTLITRLADRFGVQC 124 + G ++I P L + F Sbjct: 263 VEQTGCAGVAIGRGCQGRPWLFADIKHAFAGSD 295 >UniRef50_B9XLX7 Dihydrouridine synthase DuS n=3 Tax=Verrucomicrobia RepID=B9XLX7_9BACT Length = 340 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 4/112 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIP 76 VK + + D L +A+ D L + T V +++R A+ + P Sbjct: 136 VKTRIGFDSTGVFD--ELLPIFAKHSIDLLTVHGRTVQEMYRSEVHYDFIARAAQAVSCP 193 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVV 127 G + S + A ++L GA + I + +P L ++ + I + Sbjct: 194 VLANGNVYSAKKAEEVLQFTGARGLMIGRGVIRNPWLFHQIRHHRRGEPIFI 245 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 10/126 (7%), Positives = 37/126 (29%), Gaps = 2/126 (1%) Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NG 187 +D+ A V T + + K + ++ + + Sbjct: 119 VDSILGALRDAISVKFTVKTRIGFDSTGV-FDELLPIFAKHSIDLLTVHGRTVQEMYRSE 177 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + + + + P++A+G + + E + G + + +++ + Sbjct: 178 VHYDFIARAAQAVSCPVLANGNVYSAKKAEEVLQFTGARGLMIGRGVIRNPWLFHQIRHH 237 Query: 248 LATQGV 253 + + Sbjct: 238 RRGEPI 243 >UniRef50_C9KP46 Oxidoreductase, FAD/FMN-binding n=2 Tax=Clostridiales RepID=C9KP46_9FIRM Length = 349 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 12/104 (11%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITA-----SSDGR---VVDKSWVSRVAEVIDI 75 +I D V +K A+ G D L +IT + G + S + + + I Sbjct: 248 EGGSVIEDSVYASKVLADAGIDML---NITGGMCRYTRKGHNEPGYFQDMSSAIKKAVSI 304 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLAD 118 P + GG+K+LEDA +L + AD I + + +P + + Sbjct: 305 PVMLTGGVKTLEDAETLLKNEAADLIGVGREIMKNPYWLNEQLE 348 Score = 40.2 bits (93), Expect = 0.064, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 40/118 (33%), Gaps = 7/118 (5%) Query: 133 YDAETGKYHVNQYTGDESRTRVTQW--ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 DA ++ ++ G + +++ + + G + + R G++ Sbjct: 228 RDAVGKEFIISLRLGGCDYSEGGSVIEDSVYASKVLADAGIDMLNITGGMCRYTRKGHNE 287 Query: 191 -----EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + +++ +P++ +GG T+E ++ D K + E Sbjct: 288 PGYFQDMSSAIKKAVSIPVMLTGGVKTLEDAETLLKNEAADLIGVGREIMKNPYWLNE 345 >UniRef50_A5WG83 TIM-barrel protein, yjbN family n=2 Tax=Moraxellaceae RepID=A5WG83_PSYWF Length = 348 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 19/183 (10%), Positives = 50/183 (27%), Gaps = 14/183 (7%) Query: 77 FCVAG-GIKSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + G I + A + G ++++IN +D ++ + V Sbjct: 79 LQLGGADISEMTQCAVEAQKRGFNEVNINVGCPSDRVQHNKIGACLMAEPDTVAALVRNM 138 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY------ 188 V + D+V + G +++ Sbjct: 139 QAHVDIPVTVKHRIGIDEHDSYEFMQDFVSASAEAGCQRFIVHARIAWLNGLSPKENREI 198 Query: 189 ----DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + + + + + +GG ++E + VDG + + + E Sbjct: 199 PPLRYEDVYRLKQAFPELHIEINGGIDSIEQIKAHLQQ--VDGVMIGRAAYHNPYILAEA 256 Query: 245 KAY 247 ++ Sbjct: 257 MSF 259 Score = 40.6 bits (94), Expect = 0.057, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 11/92 (11%) Query: 40 AEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVID-IPFCVAGGIKSLEDA 89 AE G + + A +G + V R+ + + + GGI S+E Sbjct: 171 AEAGCQRFIVHARIAWLNGLSPKENREIPPLRYEDVYRLKQAFPELHIEINGGIDSIEQI 230 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFG 121 L D + I A +P ++ +G Sbjct: 231 KAHLQQ-VDGVMIGRAAYHNPYILAEAMSFWG 261 >UniRef50_A1WLV1 NADH:flavin oxidoreductase/NADH oxidase n=37 Tax=Bacteria RepID=A1WLV1_VEREI Length = 804 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 47/136 (34%), Gaps = 16/136 (11%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASS--------DGRVVDKSWVSRVAEVIDI 75 D V +AK + GAD + D +A GR+ + R+ + I Sbjct: 668 EGGTTPDDAVQIAKAFKAAGADMI---DCSAGQVSKKEQPVYGRMFQTPFADRIRQEAGI 724 Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 G I + A IL+ G AD +I P LA+P A R G I D Sbjct: 725 ATIAVGAISEADHANSILAAGRADLCAIARPHLANPAWTLTEAARIGYTPI----DWPRQ 780 Query: 135 AETGKYHVNQYTGDES 150 + K + E Sbjct: 781 YRSAKAQIEARFAREH 796 >UniRef50_Q9VIS4 CG10463 n=12 Tax=Drosophila RepID=Q9VIS4_DROME Length = 604 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 6/105 (5%) Query: 21 VQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVID-IP 76 V+ R V L E GA + + + + + +++ A +P Sbjct: 387 VKMRTGIYADKSVAHELLPLVEEWGASAVTLHGRSREQRYTKHANWAYIEECAAKAKCMP 446 Query: 77 FCVAGGIKSLEDA--AKILSFGADKISINSPALADPTLITRLADR 119 G I S ED + L+ + I AL P + + ++ Sbjct: 447 VIGNGDILSYEDYMERRTLAPHVCSVMIGRGALIKPWIFQEIKEK 491 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 34/91 (37%), Gaps = 3/91 (3%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCH-VPLIASGGAGTMEHF 216 + + V++ GA + L+ +++ + +++ +P+I +G + E + Sbjct: 400 AHELLPLVEEWGASAVTLHGRSREQRYTKHANWAYIEECAAKAKCMPVIGNGDILSYEDY 459 Query: 217 LEAFR-DADVDGALAASVFHKQIINIGELKA 246 +E V + + E+K Sbjct: 460 MERRTLAPHVCSVMIGRGALIKPWIFQEIKE 490 >UniRef50_UPI0001C41E29 NADH:flavin oxidoreductase/NADH oxidase family protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41E29 Length = 316 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASS--------DGRVVDKSWVSRVAEVIDI 75 + DI K + E G D + DI+ K E DI Sbjct: 207 EGGSKMEDIPAAVKSFVESGVDMI---DISGGLCRYQNPYSREPGYFKDLSKIAKESCDI 263 Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRF 120 P + GG+K +DA ++++ G D I I L D + + Sbjct: 264 PVILTGGVKKAKDAERLINEGYCDLIGIGRALLMDGDWSKKAIRKV 309 >UniRef50_A4ECL7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECL7_9ACTN Length = 302 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 21/110 (19%) Query: 31 DIVPLAKRYAEEGADELVFYD------IT------------ASSDGRVVDK---SWVSRV 69 ++ +AK GAD L + I G + V V Sbjct: 171 NVAEIAKALEAAGADGLSVINSIQGMAIDVHTRKSRVAKPKGGLSGPLCHHIAVRMVWEV 230 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 A+ +DIP GG+ + EDAA+ + GA +S+ DP ++A Sbjct: 231 AQAVDIPINGVGGVMTGEDAAEFILAGATCVSVGMANFVDPCASLKIAHE 280 >UniRef50_Q468H4 NADH peroxidase n=5 Tax=cellular organisms RepID=Q468H4_METBF Length = 365 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 13/102 (12%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITASSDG------------RVVDKSWVSRVAEVIDI 75 I V +AK + G + + G + + ++I Sbjct: 235 DIFQAVEIAKLLEKAGVCAIEVSGGIGEAGGVTIRTAINTPAKEAYFRDCSKAIKSAVNI 294 Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 P + GGI+SL +L G AD IS++ +++P ++ + Sbjct: 295 PVILVGGIRSLSVINDLLENGSADMISMSRAFISEPDIVLKF 336 >UniRef50_C3RNU9 NADH:flavin oxidoreductase n=2 Tax=Bacteria RepID=C3RNU9_9MOLU Length = 625 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 70/206 (33%), Gaps = 21/206 (10%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD----------ITASSDGRVVDKSWVS 67 V V+ G + +AK G + L D I+ + V Sbjct: 209 VHKVEGFRQIDEG--IAMAKILEGAGIEALHV-DVGCYEAWYKAISTVYNEEGHQLDVVK 265 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADR--FGVQC 124 + E + +P G + + A ++++ G D + + LADP ++ + Sbjct: 266 AIKENVSLPVLGQGKLFDPKKAQEVVAQGVLDYVVLGHQMLADPHWANKVKQGNTMDIAP 325 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE--VQKRGAGEIVLNMMNQD 182 V + +GK++ + +D +++ + G + + Sbjct: 326 CVGCNECLLAGFSGKHYYCAVNPLCYAEKEFALPKVDGIKKSVLVIGGGPGGMYAAITA- 384 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASG 208 + GY+++ +K E L A+G Sbjct: 385 -RKRGYEVDLYEK-EERLGGTLWAAG 408 >UniRef50_Q1QEU5 2-nitropropane dioxygenase, NPD n=3 Tax=Psychrobacter RepID=Q1QEU5_PSYCK Length = 351 Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 14/104 (13%) Query: 18 VKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDIT--ASSDGRVVDKS-------- 64 V+ +Q ++G + AK +AE GAD + + G + Sbjct: 135 VQRLQGLGTRVVGTANHPLE-AKAWAEIGADAVCVQGVEAGGHRGGWLPQSENDPLGLLT 193 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 +S+ DIP AGGI + +D + + GA+ I + L Sbjct: 194 LISQTRACNDIPLIAAGGIMNGQDIKAVQTAGAELAQIGTAFLT 237 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 42/147 (28%), Gaps = 15/147 (10%) Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 I P + +L + V + + T E Sbjct: 96 IEFTLPKHPALSFAEQLQVLYDNPVPVASFTFGIISAEQVQRLQGLGTRVVGTANHPLEA 155 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLE--------QLKKVREVCHVPLIASGG 209 W + GA + + + G R G E + + R +PLIA+GG Sbjct: 156 KAWA----EIGADAVCVQGVEAGGHRGGWLPQSENDPLGLLTLISQTRACNDIPLIAAGG 211 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHK 236 + +A + A + A + F Sbjct: 212 IMNGQDI-KAVQTAGAELAQIGTAFLT 237 >UniRef50_Q8EW89 Inosine-5'-monophosphate dehydrogenase n=1 Tax=Mycoplasma penetrans RepID=Q8EW89_MYCPE Length = 483 Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 29/157 (18%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLIT---RLADRFGVQCIVVGIDTWYDAETGKYH 141 S+E A +++ G D I I+ +I + F ++VG + Sbjct: 232 SIERAKLLIAAGVDAIIIDCAHGHSKKVIELTREIKKLFPKLFLIVGNVVTANGVN---- 287 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAG-EIVLNMMNQDGVRNGYDLEQLKKV---R 197 + + K G G + GV + + Sbjct: 288 ----------------DLYKAGADAVKIGVGPGAICTTRTVSGVGI-PQFSAILECYEEA 330 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + ++P+IA GG ++A A D + S+ Sbjct: 331 KKLNIPIIADGGIKNSGDMVKAL-AAGADAVMLGSLL 366 Score = 40.2 bits (93), Expect = 0.070, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 23/113 (20%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVF------YDITASSD 57 K++ P L + G VV + + GAD + T + Sbjct: 267 KKLFPKLFLIVGNVVTANGVND-------------LYKAGADAVKIGVGPGAICTTRTVS 313 Query: 58 GRV-VDKSWVSRV---AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 G S + A+ ++IP GGIK+ D K L+ GAD + + S Sbjct: 314 GVGIPQFSAILECYEEAKKLNIPIIADGGIKNSGDMVKALAAGADAVMLGSLL 366 >UniRef50_A6RVN2 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6RVN2_BOTFB Length = 1174 Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 31/90 (34%), Gaps = 6/90 (6%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC--VAGGIKSLE 87 + AK GA L + T G + + + E + V G I + E Sbjct: 810 LDYAKMVISAGASILTVHGRTREMKGHKTGLANWEMLRFLRESLPKEVVLFVNGNILARE 869 Query: 88 DAAKILSF-GADKISINSPALADPTLITRL 116 D L GAD + L DPT+ + Sbjct: 870 DIDDCLKATGADGVMSAEGNLYDPTIFSDA 899 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 5/91 (5%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNG-YDLEQLKKVREVCHV 202 + R T+ +TLD+ + V GA + ++ ++ G + G + E L+ +RE Sbjct: 796 VTAKIRILDTREKTLDYAKMVISAGASILTVHGRTREMKGHKTGLANWEMLRFLRESLPK 855 Query: 203 PLI--ASGGAGTMEHFLEAFRDADVDGALAA 231 ++ +G E + + DG ++A Sbjct: 856 EVVLFVNGNILAREDIDDCLKATGADGVMSA 886 >UniRef50_A2DYY3 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DYY3_TRIVA Length = 313 Score = 50.2 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 2/96 (2%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFC 78 V+ R + + + + AK + GA + + A+ VD + + + I+ Sbjct: 151 SVKMRVKDTVEESLQFAKAMVDAGAVAITVHGRLAADKRHGSVDYEHMKEIFDNINCAKI 210 Query: 79 VAGGIKSLEDAAKI-LSFGADKISINSPALADPTLI 113 GGI + DAA++ + G D I I + AL +P++ Sbjct: 211 GNGGICNKADAAEMRVKTGCDSIMIATAALKNPSVF 246 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 1/94 (1%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + R + T E+L + + + GA I ++ R+G D E +K++ + + Sbjct: 150 ISVKMRVKDTVEESLQFAKAMVDAGAVAITVHGRLAADKRHGSVDYEHMKEIFDNINCAK 209 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 I +GG E D + A+ K Sbjct: 210 IGNGGICNKADAAEMRVKTGCDSIMIATAALKNP 243 >UniRef50_Q2SJJ8 TRNA-dihydrouridine synthase n=7 Tax=Gammaproteobacteria RepID=Q2SJJ8_HAHCH Length = 349 Score = 50.2 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 73/196 (37%), Gaps = 24/196 (12%) Query: 70 AEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADP---TLITRLADRFGVQC 124 AE I + G E A +G D+I++N +D +I + + Sbjct: 69 AEEHPIAVQLGGSNPDELKECAKICEDWGYDEINLNVGCPSDRVQNNMIGACLMGYP-ER 127 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + + A + V G + + ++ L++V+ V+ G +++ + + Sbjct: 128 VAECVAAMCSAVSIPVTVKHRIGID--DQDSEEFLLNFVRTVKAAGCSTFIIH--ARKAI 183 Query: 185 RNGYDLEQLKKV------------REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 G ++ +++ + + +I +GG TM+ ++ VDG + Sbjct: 184 LKGLSPKENREIPPLIYPRAYLIKQTFPELEIIINGGIKTMDESESHLQE--VDGVMIGR 241 Query: 233 VFHKQIINIGELKAYL 248 +++ + ++ L Sbjct: 242 EAYQRPWMLADVDHRL 257 >UniRef50_B1HS08 2-nitropropane dioxygenase n=2 Tax=Bacillaceae RepID=B1HS08_LYSSC Length = 335 Score = 50.2 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 12/126 (9%) Query: 121 GVQCIVVGIDTWYDAETGKYH---VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 G V+ + T V + + + TL+ Q V++ G +VL Sbjct: 110 GQVQAVIEEKVKICSFTFGIPSAEVLKQLKEHGVYTIGTATTLEEAQLVEQAGMDAVVLQ 169 Query: 178 MMNQDGVRNGYD--------LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 G R + + L++V +P+IA+GG T + +A ++ Sbjct: 170 GGEAGGHRGSFTAPLQLIPLYDLLQQVAGKIAIPIIAAGGLVTKKDIQKAL-ESGAQAVQ 228 Query: 230 AASVFH 235 + Sbjct: 229 VGTALL 234 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 10/106 (9%) Query: 33 VPLAKRYAEEGADELVFYDITA--------SSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 + A+ + G D +V A + + + +VA I IP AGG+ Sbjct: 152 LEEAQLVEQAGMDAVVLQGGEAGGHRGSFTAPLQLIPLYDLLQQVAGKIAIPIIAAGGLV 211 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + +D K L GA + + + L ++ + + Sbjct: 212 TKKDIQKALESGAQAVQVGTALLVAEEC--EISPLYKNAVLASKEQ 255 >UniRef50_C8WHP0 Dihydroorotate dehydrogenase family protein n=3 Tax=Bacteria RepID=C8WHP0_EGGLE Length = 356 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 21/111 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------ITASSDG---------------RVVDKSWVS 67 + D+ +A+ GAD L + I A + V V Sbjct: 223 VTDVTEIARAAVSAGADALSLINTLLGMAIDAERRRPQLARGVGGLSGPAVKPVALRMVW 282 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 V + +D+P GGI DA + + GA +++ + +P + D Sbjct: 283 EVHQAVDVPLLGMGGISCATDAVEFMLAGATAVAVGTANFVNPHATVEIID 333 >UniRef50_O27281 Dihydroorotate dehydrogenase n=20 Tax=Euryarchaeota RepID=PYRD_METTH Length = 303 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 23/124 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD----------------ITASSDG------RVVDKSWV 66 + DIV +A E G+D L + ++ + G + V V Sbjct: 168 VTDIVEIAGSAEEAGSDALTLINSLGPGMKIDIKTARPILSNAFGGMSGPAIKPVAVRCV 227 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD-PTLITRLADRFGVQCI 125 V +DIP GG++ +DA + L GA + + + + D P + ++ + Sbjct: 228 YDVYRSVDIPIMGVGGVRDFQDAVEFLFAGARAVQVGTAIMYDGPEVFMKICRGLEAFMM 287 Query: 126 VVGI 129 G Sbjct: 288 AEGF 291 >UniRef50_B2A1T3 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1T3_NATTJ Length = 652 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 19/112 (16%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITAS---------------SDGRVVDKSWVSR 68 + D A++ G D D+T + + Sbjct: 233 NGGITLEDAKKTAEKLENVGVDAF---DVTGGSDDVIHLYVPSSYVLEENEGCFIDLAAE 289 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADR 119 + + +++P GG++S + A ++L G D I + +ADP ++++ Sbjct: 290 IKKTVNVPVMSGGGVESPDAAEQLLESGQVDMIFMGRQLIADPEWVSKIEKE 341 >UniRef50_C0D969 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D969_9CLOT Length = 634 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 24/118 (20%) Query: 17 VVKGVQFR----NHEIIGDIVPLAKRYAEEGADELVF--------------YDITASSDG 58 VV + + + + + K E G D + DI Sbjct: 199 VVFRISGDEMVERGRKLPETIEIIKLLEEAGIDAVHVSIGMPESEEYMCAPMDI-----P 253 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITR 115 + S V + IP G I ++E A +IL G AD +I LADP L+ + Sbjct: 254 DGFNTSAAEAVKREVKIPVITVGRITTMEQAEEILEQGKADLTAIGRAQLADPGLVNK 311 Score = 42.1 bits (98), Expect = 0.018, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 46/153 (30%), Gaps = 8/153 (5%) Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 A ++ + G + VV + + + + + + Sbjct: 179 ARYSLEIVRAIKAICGTEYPVVFRISGDEMVERGRKLPETIEIIKLLEEAGIDAVHVSIG 238 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 + + E + M+ + +G++ + V+ +P+I G TME E Sbjct: 239 MPES--EEYMCAPMD---IPDGFNTSAAEAVKREVKIPVITVGRITTMEQAEEILEQGKA 293 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRIC 258 D + G + Y+ +R C Sbjct: 294 DLTAIGRAQLA---DPGLVNKYMGGDPAPVRRC 323 >UniRef50_A4HJH5 Dihydrouridine synthase (Dus), putative n=3 Tax=Leishmania RepID=A4HJH5_LEIBR Length = 666 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCH--VPLIASGGAGTMEHF 216 + + ++ GA + ++ ++ ++E +++VR +P+I++G T + Sbjct: 391 YARMIRDAGAQVLCIHGRTREMKGQHTGTANMELIRRVRLALSGTIPVISNGNVRTYDDV 450 Query: 217 LEAFRDADVDGALAA 231 + ++ +G + A Sbjct: 451 IAHLQETRCEGHMCA 465 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 6/84 (7%) Query: 36 AKRYAEEGADELVFYDITASSDGR---VVDKSWVSRVAEVID--IPFCVAGGIKSLED-A 89 A+ + GA L + T G+ + + RV + IP G +++ +D Sbjct: 392 ARMIRDAGAQVLCIHGRTREMKGQHTGTANMELIRRVRLALSGTIPVISNGNVRTYDDVI 451 Query: 90 AKILSFGADKISINSPALADPTLI 113 A + + P L DP L Sbjct: 452 AHLQETRCEGHMCAEPLLWDPKLF 475 >UniRef50_UPI0001789498 N-acylglucosamine-6-phosphate 2-epimerase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789498 Length = 235 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 21/188 (11%), Positives = 51/188 (27%), Gaps = 22/188 (11%) Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD-KISINSPALADP 110 + + R + ++ + + +P +L + +P L D Sbjct: 37 LGGAIGIRANGTADIAAIKAAVSVPVIG------------LLKRQIEGYPVYITPTLEDA 84 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKY-HVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + G + + + K V + TL+ Sbjct: 85 LAVHEA----GADIVAMDGTRRPRPDGNKLKEVVDELIRRGIHVMADVSTLEEGLYAADL 140 Query: 170 GAGEIVLN---MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 G I D+ + ++ + +P+IA G + + ++A +A Sbjct: 141 GVHYISTTLSGYTAYSPESTKPDIGLVARLVQETRLPVIAEGRFASADDMIQAL-NAGAR 199 Query: 227 GALAASVF 234 + S Sbjct: 200 FVVVGSAI 207 >UniRef50_C5D3D6 Indole-3-glycerol phosphate synthase n=10 Tax=Bacillaceae RepID=TRPC_GEOSW Length = 258 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 57/219 (26%), Gaps = 35/219 (15%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK Y + GAD + G + ++S + + + +P I + Sbjct: 63 PVAIAKAYEKAGADAISVLTDERYFQG---HRGYLSDIKQAVQLPILRKDFIIDRIQIEE 119 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + GAD I + AL TL + + + + + Sbjct: 120 SVRIGADAILLIGEALPAKTLYELYQEAYDKGLECLVEVHQRETLENILDIFT------- 172 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC-HVPLIAS-GG 209 + D + LE KV +I S G Sbjct: 173 PEIIGINNRDL----------HTFVTS-----------LETTSKVIPFVPSGSVIVSESG 211 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 T + + D L + ++ L Sbjct: 212 ISTSHDL-KTVQTYGADAVLVGESLM-RKDDVEAAIYEL 248 >UniRef50_C4F860 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F860_9ACTN Length = 307 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 21/107 (19%) Query: 34 PLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVSRVAEV 72 +A+ EGAD L + T G + V A Sbjct: 179 EIARALEAEGADGLTVINSIPGMSIDVRTRRSRLSKPTGGLSGPLCHPIAVRMVWEAANA 238 Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 +DIP C GG+ + EDAA+ + GA +S+ +P R+ Sbjct: 239 VDIPICGVGGVMTGEDAAEFILAGACCVSVGMANFVEPDASVRILHE 285 >UniRef50_A4IQ84 Indole-3-glycerol phosphate synthase n=7 Tax=Bacteria RepID=TRPC_GEOTN Length = 258 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 58/212 (27%), Gaps = 38/212 (17%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D V +AK Y GAD + G + ++ V E ++IP I Sbjct: 58 RPDFDPVAIAKAYERAGADAISVLTDERYFQG---HRRYLQEVKEAVNIPVLRKDFIIDR 114 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADR---FGVQCIVVGIDTWYDAETGKYHVN 143 + GAD I + AL P ++ L G++C+V Sbjct: 115 RQVEESARLGADAILLIGEAL-SPEMLEALYQEAYSIGLECLVEVHAKETLERILARFTP 173 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 + G +R T TL+ + + + Sbjct: 174 EVVGINNRDLHTFVTTLEATKALASL-----------------------------IPPSS 204 Query: 204 LIAS-GGAGTMEHFLEAFRDADVDGALAASVF 234 +I S G + R V L Sbjct: 205 VIVSESGISSYRDV-RTIRSYGVQAMLVGESL 235 >UniRef50_C5X8Y0 Putative uncharacterized protein Sb02g020430 n=1 Tax=Sorghum bicolor RepID=C5X8Y0_SORBI Length = 403 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 31/230 (13%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D V +A+ Y + GA L G + V ++ P + + Sbjct: 200 RDHFDPVEIAQAYEKNGAACLSILTDEKHFQGSFENLEAVRN--SGVNCPLLCKEFVIDV 257 Query: 87 EDAAKILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 S GAD I + + L D + R+ G+ +V D K + Sbjct: 258 WQIYYARSKGADAILLIAAVLPDIDITYFLRVCKSLGMTALVEVHDEKELDRVLKIDGVE 317 Query: 145 YTGDESRTRVT-QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 G +R+ T + +T + ++KRG + + + Sbjct: 318 LIGINNRSLGTFEVDTANTNMLLEKRG------------------------DIIKKKRIQ 353 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +++ G T + ++A V L Q + G+ A L + + Sbjct: 354 VVSESGLFTPDDV-AYVQNAGVFAVLVGESLVTQE-DPGQAIAGLFGKEL 401 >UniRef50_Q7UJL3 Inosine-5'-monophosphate dehydrogenase n=2 Tax=Bacteria RepID=Q7UJL3_RHOBA Length = 539 Score = 49.9 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 64/207 (30%), Gaps = 25/207 (12%) Query: 37 KRYAEEGADELVFYDITASSDG--RVVDKSWVSRVAEVIDIP-----FCVAGGIKSLEDA 89 K E+ ++L+ D G + D + R P A G+ E A Sbjct: 219 KILTEKRVEKLLLIDEERKLTGLITIRDIDMMKRYPRACKDPQGRLRVGAAIGVGDYERA 278 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 ++ G D + ++S +I + + ++ G+ Sbjct: 279 ESLIGKGVDVLVVDSAHGHSRNVIET---------------VREIKQNKSWDIDVVAGNV 323 Query: 150 SRTRVTQWETLDWVQEVQ-KRGAGEIVLNM-MNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 + V+ G G I ++ GV + KV + ++P+IA Sbjct: 324 ATAEGAADLIAAGADAVKVGIGPGSICTTRVISGIGVPQVTAILSAVKVAQEKNIPVIAD 383 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVF 234 GG +A A + S+F Sbjct: 384 GGIRFSGDITKAI-AAGASTVMIGSLF 409 >UniRef50_C7JI48 Enoyl[acyl-carrier-protein (ACP)] reductase n=8 Tax=Acetobacter pasteurianus RepID=C7JI48_ACEP3 Length = 364 Score = 49.9 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 9/87 (10%) Query: 36 AKRYAEEGADELVFYDIT-----ASSDGRVVD----KSWVSRVAEVIDIPFCVAGGIKSL 86 A+ +AE GAD + I S + V + + I IP AGGI Sbjct: 158 ARAWAEVGADAVCAQGIEAGGHRGSFLSDGGNGVGLLPLVREIVKDISIPVIAAGGIMDG 217 Query: 87 EDAAKILSFGADKISINSPALADPTLI 113 E +S GAD + + + L + Sbjct: 218 EGIVAAISLGADAVQMGTAFLGCSDAV 244 Score = 42.5 bits (99), Expect = 0.013, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 L ++++ + +P+IA+GG E + A D + F Sbjct: 194 LPLVREIVKDISIPVIAAGGIMDGEGIVAAI-SLGADAVQMGTAFL 238 >UniRef50_UPI000038257B COG1902: NADH:flavin oxidoreductases, Old Yellow Enzyme family n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI000038257B Length = 254 Score = 49.9 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 35/118 (29%), Gaps = 6/118 (5%) Query: 28 IIGDIVPLAKRYAEEGADELVFY--DITASSD---GRVVDKSWVSRVAEVIDIPFCVAGG 82 + + LA+ GA + ++ + G + R+ + G Sbjct: 126 DLDQTLELARALKSRGAAAIHVSTGGLSPAQKIPVGPGYQVPFAERIKAETGLTTIAVGL 185 Query: 83 IKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 I A IL+ G AD IS+ L DP A G Q K Sbjct: 186 ITEPRQAEAILAEGKADAISLARAVLYDPRWPWHAAAELGAQVRAPKQYWRSQPHQYK 243 >UniRef50_Q0B324 Dihydroorotate oxidase B, catalytic subunit n=8 Tax=Proteobacteria RepID=Q0B324_BURCM Length = 325 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + V + + IP GGI+S DA + L GA + + + + DP ++ + D Sbjct: 218 KPIALRLVHQCYRAVSIPVIGCGGIRSAADAIEFLLAGASAVQVGTASFRDPGVMRTIID 277 Score = 41.4 bits (96), Expect = 0.028, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 5/70 (7%) Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ----IINIGE 243 L + + +P+I GG + +E A + + I Sbjct: 220 IALRLVHQCYRAVSIPVIGCGGIRSAADAIEFL-LAGASAVQVGTASFRDPGVMRTIIDG 278 Query: 244 LKAYLATQGV 253 L+ + A +G+ Sbjct: 279 LEQFCADEGI 288 >UniRef50_B0SXE6 TIM-barrel protein, nifR3 family n=2 Tax=Caulobacteraceae RepID=B0SXE6_CAUSK Length = 335 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 1/109 (0%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPL 204 D + GA I ++ + G D + V+ VP+ Sbjct: 143 VKMRLGWDDDSRNAADIARRAVDAGAQAITVHGRTRCQFYKGVADWSAVAAVKAAVSVPV 202 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + +G + A + DG + + + ++A L +G Sbjct: 203 LVNGDIIDGDTARLALEQSGADGVMIGRGVYGRPWIAQAIEAALNGEGF 251 Score = 43.7 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 3/110 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + + +A+R + GA + + T V D S V+ V + +P Sbjct: 143 VKMRLGWDD-DSRNAADIARRAVDAGAQAITVHGRTRCQFYKGVADWSAVAAVKAAVSVP 201 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 V G I + A L GAD + I P + + + Sbjct: 202 VLVNGDIIDGDTARLALEQSGADGVMIGRGVYGRPWIAQAIEAALNGEGF 251 >UniRef50_C9RM69 TIM-barrel protein, yjbN family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM69_FIBSS Length = 345 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 59/184 (32%), Gaps = 14/184 (7%) Query: 77 FCVAG-GIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + G L A+K++ G ++++N +D + VV Sbjct: 66 LQLGGSNPADLASASKLVEAAGFSEVNLNCGCPSDRVQNGNFGACLMKEKNVVADCFKAM 125 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD----- 189 + V+ + D++Q V+ G +++ Sbjct: 126 QDAVSIPVSIKCRIGVDDLDSWEFFTDFIQTVRDAGCKIFIVHARKAWLKGLSPKENREV 185 Query: 190 ----LEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 E + ++ E+ + L +GG T++ E +D DG + ++ + + Sbjct: 186 PPLHYEFVHRLKAEMPELNLSINGGIKTLDQIEEQLKDL--DGVMVGREAYENPWFLHDA 243 Query: 245 KAYL 248 A + Sbjct: 244 DARI 247 Score = 41.8 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 12/121 (9%) Query: 34 PLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVID-IPFCVAGGI 83 + + G + + A G + +V R+ + + + GGI Sbjct: 152 DFIQTVRDAGCKIFIVHARKAWLKGLSPKENREVPPLHYEFVHRLKAEMPELNLSINGGI 211 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRL-ADRFGVQCIVVGIDTWYDAETGKYHV 142 K+L+ + L D + + A +P + A FG A + Sbjct: 212 KTLDQIEEQLKD-LDGVMVGREAYENPWFLHDADARIFGDVRPESNDPAEIIAGNARPAT 270 Query: 143 N 143 Sbjct: 271 R 271 >UniRef50_A7HK00 Dihydrouridine synthase DuS n=8 Tax=Thermotogaceae RepID=A7HK00_FERNB Length = 322 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 49/178 (27%), Gaps = 31/178 (17%) Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 + + + + + G +K++ GA S L D ++ Sbjct: 82 AAIVQEKGLWVDLNAG----CPVSKVIKKGA-----GSALLKDLGEFRKVVRA------- 125 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + ++ V G E + + + + ++ + + Sbjct: 126 ------MRSVLKRFTVKTRIGWEKDEFEKIYNI------LLEENVDAVFVHGRTAKQMYS 173 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 G + K+ VPL SG T E A + G + A E+ Sbjct: 174 G---KATWKIYNPGFVPLYISGDIYTKEDIKNAMEQSGATGVIVARGSIGNPWIFSEI 228 >UniRef50_C0NEG2 tRNA-dihydrouridine synthase n=5 Tax=Ajellomyces RepID=C0NEG2_AJECG Length = 583 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 42/139 (30%), Gaps = 10/139 (7%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVI--DIP 76 +FR E + A+ GA + + G D S++ + E + D Sbjct: 189 KFRIQETKEKTLEYARIILSAGASIITVHGRRREQKGHNTGLADWSYIRYLRENLPADTV 248 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I + D K L GAD + +L DPT+ V G + Sbjct: 249 IFANGNILNHGDIEKCLEATGADGVMSAEGSLCDPTIF----SGPPPSSSVGGSGMRGEK 304 Query: 136 ETGKYHVNQYTGDESRTRV 154 G + G Sbjct: 305 RDGAEYWVGRDGKGGYRVD 323 Score = 46.8 bits (110), Expect = 6e-04, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNG-YDLEQLKKVREV--C 200 + R + T+ +TL++ + + GA I ++ ++ G G D ++ +RE Sbjct: 186 VTAKFRIQETKEKTLEYARIILSAGASIITVHGRRREQKGHNTGLADWSYIRYLRENLPA 245 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 + A+G + DG ++A Sbjct: 246 DTVIFANGNILNHGDIEKCLEATGADGVMSA 276 >UniRef50_B1JA40 2-nitropropane dioxygenase NPD n=11 Tax=Proteobacteria RepID=B1JA40_PSEPW Length = 358 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 29/102 (28%), Gaps = 11/102 (10%) Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----------DLEQLK 194 ++ T++ ++ G I+ G R + + Sbjct: 148 RVKASGAKVLSSATTVEEALWLEANGCDAIIAMGFEAGGHRGMFLSEDINSQIGTFALVP 207 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 +V + +P+IA+GG + A + + Sbjct: 208 QVADAVDLPVIAAGGIADHRGLVAAL-ALGASAVQIGTAYLF 248 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 10/89 (11%) Query: 33 VPLAKRYAEEGADELVFYD----------ITASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 V A G D ++ ++ + ++ + V +VA+ +D+P AGG Sbjct: 163 VEEALWLEANGCDAIIAMGFEAGGHRGMFLSEDINSQIGTFALVPQVADAVDLPVIAAGG 222 Query: 83 IKSLEDAAKILSFGADKISINSPALADPT 111 I L+ GA + I + L P Sbjct: 223 IADHRGLVAALALGASAVQIGTAYLFCPQ 251 >UniRef50_A9IBQ0 Putative uncharacterized protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IBQ0_BORPD Length = 314 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 5/122 (4%) Query: 15 GQVVKGVQFRNHEIIGDIVPL--AKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAE 71 G V+ + ++ D+ + A+R E G D L+ G + +++ V Sbjct: 116 GPAVRAIHDYGGKVYCDVATVKHARRAIEAGVDGLILLCAGAGGHTGWINPFAFLREVRS 175 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 D P +AGGI GAD + + + LA + ++ + D Sbjct: 176 FFDGPVVLAGGITDGRAIRAAQLLGADGVYMGTRFLAAQESL--ASEDYKRTLAASSADD 233 Query: 132 WY 133 Sbjct: 234 IV 235 Score = 41.8 bits (97), Expect = 0.021, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 53/186 (28%), Gaps = 25/186 (13%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE------- 136 ++ E L S A A ++ + V I+ ++ D + Sbjct: 49 RTPELLEDWLVD-----IETSLAAARAAKPEQIVAPYAVNLIMHASNSRRDTDLAILVRH 103 Query: 137 ---------TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + D T+ + + G ++L G Sbjct: 104 RVPLVIASVGNPGPAVRAIHDYGGKVYCDVATVKHARRAIEAGVDGLILLCAGAGGHTGW 163 Query: 188 YD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI--GEL 244 + L++VR P++ +GG + A + DG + F ++ + Sbjct: 164 INPFAFLREVRSFFDGPVVLAGGITDGR-AIRAAQLLGADGVYMGTRFLAAQESLASEDY 222 Query: 245 KAYLAT 250 K LA Sbjct: 223 KRTLAA 228 >UniRef50_B7G5S1 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5S1_PHATR Length = 229 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 9/112 (8%) Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-----NQDGVRNGYDL 190 G V+ + R ET++ Q++++ GA I ++ + G Sbjct: 115 RAGAAAVSIPIFVKIRLLDKVEETIELCQQLERAGASLIAVHARYRASWERKGAGARDGP 174 Query: 191 EQLKKVR----EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 L ++ + +P+IA+G T + + DG ++A Sbjct: 175 ALLDQIAVLKQHITSIPIIANGNVITYDDVEKNLELTGADGVMSAEGILDNP 226 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 10/103 (9%) Query: 21 VQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR--------VVDKSWVSRVAEV 72 V+ R + + + + L ++ GA + + +S R ++ + + Sbjct: 127 VKIRLLDKVEETIELCQQLERAGASLIAVHARYRASWERKGAGARDGPALLDQIAVLKQH 186 Query: 73 -IDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLI 113 IP G + + +D K L GAD + L +P L Sbjct: 187 ITSIPIIANGNVITYDDVEKNLELTGADGVMSAEGILDNPALF 229 >UniRef50_B0EBU6 tRNA-dihydrouridine synthase, putative n=4 Tax=Entamoeba RepID=B0EBU6_ENTDI Length = 366 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 34/196 (17%) Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 VS + EV I + G S K + +++ + ++ Sbjct: 110 VSLIKEVCGIDINLGCG--------MWFST---KGEMGQALVSNRDKLEKIVKALVKLGK 158 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGV 184 + + T ETL+++Q + G I L+ + ++ Sbjct: 159 PISAKIR-------------------LQQTHEETLEFIQWLYSLGISIISLHGRHHKELY 199 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA-DVDGALAASV--FHKQIINI 241 D +L+KV + C LI +G E + +V G + H + N Sbjct: 200 GVDCDWVELEKVVKDCPYDLILNGDICKQEDITKLLSFGKNVRGVMIGRASGIHLGLFNP 259 Query: 242 GELKAYLATQGVEIRI 257 ++R+ Sbjct: 260 QGGDYVFDENKTKMRM 275 >UniRef50_O74731 tRNA-dihydrouridine synthase 2 n=2 Tax=Schizosaccharomyces RepID=DUS2_SCHPO Length = 479 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 6/115 (5%) Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 +V +D + Y ++ T+ +TL V+ + G I ++ Sbjct: 135 DRLVSILDALVNEIGKPYKISISCKIRLL--ETKEDTLKLVERICDTGVRAITVHCRTTP 192 Query: 183 GVRNGY----DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 L ++ V V ++ +G + L+ VDG L A Sbjct: 193 MRNTEPADRSYLSEIVGVCRNKDVSILVNGDVLSYNDGLDVIEKYGVDGVLIARA 247 >UniRef50_Q0STG2 Dihydrouridine synthase family protein n=27 Tax=Clostridiales RepID=Q0STG2_CLOPS Length = 321 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 2/92 (2%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 E + ++ K E++++ + N +LE K + P+ +G T+E Sbjct: 142 EEFYELIKIYNKYPMEELIIHPRTRQDFYGNKPNLEVFKDAISLSKNPVCYNGDIFTLED 201 Query: 216 FLEAFRDAD-VDGALAASVFHKQIINIGELKA 246 + + VD + + E+ Sbjct: 202 HNKLVEEFKEVDKIMLGRGILANPALMNEILN 233 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 3/88 (3%) Query: 34 PLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 L K Y + +EL+ + T G + + P C G I +LED K+ Sbjct: 146 ELIKIYNKYPMEELIIHPRTRQDFYGNKPNLEVFKDAISLSKNPVCYNGDIFTLEDHNKL 205 Query: 93 LS--FGADKISINSPALADPTLITRLAD 118 + DKI + LA+P L+ + + Sbjct: 206 VEEFKEVDKIMLGRGILANPALMNEILN 233 >UniRef50_A5Z3X7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z3X7_9FIRM Length = 326 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 64/173 (36%), Gaps = 13/173 (7%) Query: 86 LEDAAKILSFGADK-ISINSPALADPTLITRLADRF--GVQCIVVGIDTWYDAETGKYHV 142 ++ A +++ G DK I++N+ + + F + + D ++ K Sbjct: 75 IKAANQLIELGYDKEINLNAGCPSGTVVSKNKGAGFLKDTEAMDRFFDETFNWLEKKNSE 134 Query: 143 NQYTGDESRTRVTQWETLDW---VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE 198 +TR+ +E ++ ++ K +++++ ++ + G ++E K E Sbjct: 135 GHNLSISVKTRIGMYEPDEFENILEVYNKYPISQLIVHPRTREQLYKGTPNMEAFKYALE 194 Query: 199 VCHVPLIASGGAGTMEHFLEAFR------DADVDGALAASVFHKQIINIGELK 245 P+ +G T+E++ + + + + E+K Sbjct: 195 NSKNPVCYNGDINTVENYHRIIEKINDDSEMKIGSIMIGRGLIGNPNLVNEIK 247 >UniRef50_A4YQH6 NADPH dehydrogenase n=5 Tax=Bacteria RepID=A4YQH6_BRASO Length = 786 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 12/106 (11%) Query: 30 GDIVPLAKRYAEEGADELVFYDIT--------ASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 D V +A+ + E G D D++ GR+ + +V + G Sbjct: 636 DDAVRIARAFGEAGVD---LVDVSTGQTVREARPIYGRMFQTPFSDQVRNEAHVATMCVG 692 Query: 82 GIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIV 126 I + + IL+ G AD +++ P L DP + A +G Sbjct: 693 NITTADQVNTILAAGRADLVALGRPHLVDPAFTMKAAAWYGADMFC 738 >UniRef50_Q6SH52 Oxidoreductase, FAD/FMN-binding n=2 Tax=Bacteria RepID=Q6SH52_9BACT Length = 409 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 47/151 (31%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVF---------------- 49 ++ ++V DG+ R + D + AK GAD LV Sbjct: 218 VLAKINVSDGR-------RRGANVEDAIVTAKLLEAAGADMLVLSGGRNVESGWFMFGSN 270 Query: 50 YDITA--------SSDG----------------RVVDKSWVSRVAEVIDIPFCVAGGIKS 85 ++ A S G + + ++ E + +P GG+KS Sbjct: 271 MNLEAMYRVLGKWSLSGMAIGATAKSAPSIDFRELYFWEYSKKIREAVSLPLTYLGGVKS 330 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRL 116 ++ A+ ++ G + +++ L +P L+ + Sbjct: 331 ADNVAQCMAAGFEAVALARALLREPDLVNKW 361 Score = 39.8 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 63/226 (27%), Gaps = 27/226 (11%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYD---------ITASSDGRVVDKSWVSRVAEVID 74 ++ D V A+ G D + + ++ + R + Sbjct: 142 DMQNMVDDFVTAAEHCVSAGFDAVEIHMGHGYLLNQFLSPMDNKRKDAYGGSAENRARFP 201 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 A + +D A + + D + +L + G +V+ Sbjct: 202 TRVLAAVKQRVGQDIAVLAKINVSDGRRRGANVEDAIVTAKLLEAAGADMLVLS------ 255 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD----GVRNGYDL 190 G+ + + + + + K + + + R Y Sbjct: 256 --GGRNVESGW-----FMFGSNMNLEAMYRVLGKWSLSGMAIGATAKSAPSIDFRELYFW 308 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 E KK+RE +PL GG + ++ + A + A + Sbjct: 309 EYSKKIREAVSLPLTYLGGVKSADNVAQCM-AAGFEAVALARALLR 353 >UniRef50_B7GNV1 N-acylglucosamine-6-phosphate 2-epimerase n=10 Tax=Actinobacteria (class) RepID=B7GNV1_BIFLI Length = 231 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 60/230 (26%), Gaps = 31/230 (13%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 +D G ++ Q E + +A+ V A+ + + +S + Sbjct: 12 IDSLHGTLIVSCQAYPGEPMRHPETMAQVAQS------VVIGGAAAIRCQG--LADISAI 63 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + +P GI G + + I I G + + Sbjct: 64 KGQVKVPVI---GI---------WKEGDNGVYITPTLRHARACIMA-----GADIVALDA 106 Query: 130 DTWYDAETGKYH-VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN---MMNQDGVR 185 + + E + ++ G I + Sbjct: 107 TDRPRPDGLTLQQTARQLKSEGAILMADCGCIEDSDAAVDAGFDIISTTLAGYTDSRAKT 166 Query: 186 NGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 G D E L + + HVP+I G T +A + A+ + Sbjct: 167 EGPDYELLAQMLERHPHVPVICEGRIHTPSDAAKAI-EMGAWAAVVGTAI 215 >UniRef50_B0TGQ8 Dihydroorotate dehydrogenase n=32 Tax=Bacteria RepID=PYRD_HELMI Length = 309 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 21/118 (17%) Query: 29 IGDIVPLAKRYAEEGADELVFY------DIT------------ASSDG---RVVDKSWVS 67 + DI +A+ + GAD L DI G + V + Sbjct: 172 VTDITEMARAVVDAGADALALINTLLGMDIDICTRRPVLANIFGGLSGPAIKPVALRMIY 231 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 +V + +P GGI + +DA + GA I++ + +P + + C Sbjct: 232 QVYRAVHVPILGMGGIMNSQDAIAFMLAGATAIAVGTANFTNPRATMDILEGIEEYCC 289 Score = 39.8 bits (92), Expect = 0.095, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 71/232 (30%), Gaps = 38/232 (16%) Query: 52 ITASSDGRVVDKSWVSRVA---EVIDIPFCVAGGIKSLEDAAKI--LSFGADKISINSPA 106 + A ++++ ID P V S+ED ++ + AD ++ Sbjct: 70 LNAIGLQNPGVEAFIRDYLPPLRQIDTPVIVNVSGNSVEDYGRLASILDEADGVAALEVN 129 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 ++ P + +FG T E + V + + + + V Sbjct: 130 ISCPN-VKEGGIQFGTLPASAAAVTRAVRENTQKPV------IVKLSPNVTDITEMARAV 182 Query: 167 QKRGAGEIVL------NMMNQD----------GVRNGYDLE-----QLKKVREVCHVPLI 205 GA + L ++ G +G ++ + +V HVP++ Sbjct: 183 VDAGADALALINTLLGMDIDICTRRPVLANIFGGLSGPAIKPVALRMIYQVYRAVHVPIL 242 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQI----INIGELKAYLATQGV 253 GG + + AF A + + ++ Y +GV Sbjct: 243 GMGGIMNSQDAI-AFMLAGATAIAVGTANFTNPRATMDILEGIEEYCCREGV 293 >UniRef50_C4FAV3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAV3_9ACTN Length = 649 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 21/123 (17%) Query: 10 LDVRDGQVVKGVQFRNHEIIG----DIVPLAKRYAEEGADELVFYDIT---------ASS 56 +DVR + + G D++ +++R + G D + T A+ Sbjct: 220 IDVR-------ISGDEYTDGGLTLNDMIYVSRRLEKAGVDMIHVSGGTTIKRGSAIPAAG 272 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITR 115 + + + + IP G I A +++ G AD + L D + Sbjct: 273 TKQASHADLSREIKKHVTIPVATVGRINEAWIAEELIEDGAADICMMGRANLCDAEFCNK 332 Query: 116 LAD 118 A Sbjct: 333 AAA 335 >UniRef50_O29991 NADH-dependent flavin oxidoreductase n=1 Tax=Archaeoglobus fulgidus RepID=O29991_ARCFU Length = 378 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 16/103 (15%) Query: 29 IGDIVPLAKRYAEEGADELVF---------YDITA------SSDGRVVDKSWVSRVAEVI 73 I + V +AK + G + + ++ + G + + R+ E + Sbjct: 245 IDEAVRIAKLLDDAGFEAIEVSGGMYESIYHNRYNVVSQKVAKSGEAYFREYAFRIKEAV 304 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 IP GGIKS + A ++L D +S++ P + DP L ++ Sbjct: 305 SIPVMAVGGIKSRQTAEELLKK-VDFVSMSRPLIRDPYLPKKM 346 >UniRef50_Q3AC05 Dihydroorotate dehydrogenase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=PYRD_CARHZ Length = 307 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 37/114 (32%), Gaps = 21/114 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------IT------------ASSDG---RVVDKSWVS 67 + DI AK GAD L + I G R + V Sbjct: 169 VTDITVYAKAAENAGADALTLINTFTGMVIDVKSKKPILGNKHGGVSGPAIRPMAVKMVY 228 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + IP GGI S E A + GA I + S +P + RL G Sbjct: 229 DCFKAVSIPIIGVGGIDSKEAALEFFLAGATAIQVGSQNFVEPGFMPRLIRELG 282 >UniRef50_P49058 Inosine-5'-monophosphate dehydrogenase n=23 Tax=cellular organisms RepID=IMDH_BORBU Length = 404 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 56/176 (31%), Gaps = 21/176 (11%) Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALAD---PTLITRLADRFGVQCIVVGIDTWYDA 135 V+ I ++E +++ D + I+S LI ++ ++ ++ G +A Sbjct: 148 VSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEA 207 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 V + T + V G +I + + + Sbjct: 208 ALDLISVGADCLKVGIGPGSICTT----RIVAGVGVPQI--TAI----------CDVYEA 251 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 ++ +IA GG ++A A D + ++F + E Y + Sbjct: 252 -CNNTNICIIADGGIRFSGDVVKAI-AAGADSVMIGNLFAGTKESPSEEIIYNGKK 305 >UniRef50_Q7PVV7 AGAP009171-PA (Fragment) n=3 Tax=Endopterygota RepID=Q7PVV7_ANOGA Length = 599 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 34/104 (32%), Gaps = 3/104 (2%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKK-VREVCHVP 203 + + V + + GA I ++ ++ D E L++ + VP Sbjct: 382 VKTRIGIYNNKLIAHEMVPKFEDWGASLITIHGRTKEQRYTKRADWEYLQQCATQAQSVP 441 Query: 204 LIASGGAGTMEHFLEA-FRDADVDGALAASVFHKQIINIGELKA 246 + +G E + + ++ G + + E+K Sbjct: 442 VFGNGDIFGYEDYEHIRTKCPNIAGVMVGRGALIKPWVFQEIKE 485 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 46/147 (31%), Gaps = 8/147 (5%) Query: 34 PLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVA-EVIDIPFCVAGGIKSLEDAAK 91 + ++ + GA + + T + D ++ + A + +P G I ED Sbjct: 397 EMVPKFEDWGASLITIHGRTKEQRYTKRADWEYLQQCATQAQSVPVFGNGDIFGYEDYEH 456 Query: 92 ILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 I + + + AL P + + +R G Y + + D Sbjct: 457 IRTKCPNIAGVMVGRGALIKPWVFQEIKER-KTLDPSSGERFEMLKRYVNYGLEHWGSDT 515 Query: 150 SRTRVTQWETLDW---VQEVQKRGAGE 173 T+ L+W + G E Sbjct: 516 KGVETTRRFLLEWQSFLYRYVPYGLLE 542 >UniRef50_A2F0D1 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2F0D1_TRIVA Length = 333 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 40/143 (27%), Gaps = 5/143 (3%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 AD I +N + +V ++ + Sbjct: 107 ADAIDLNCGCPESFATSRGTGSSLMSEPEIVADVVSALRRNYNVPISVKHRIHHNIEES- 165 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEH 215 + + + GA I ++ ++ G + +K V + HV I +GG E Sbjct: 166 ---IQFAVACENAGASAIAVHGRLKEQKNKGSVAYDNMKLVFDHLHVAKIGNGGVKNREM 222 Query: 216 FLEAFRDADVDGALAASVFHKQI 238 E + + +S K Sbjct: 223 AKEMMEKTGCESVIISSAALKNP 245 >UniRef50_O74553 tRNA-dihydrouridine synthase 4 n=1 Tax=Schizosaccharomyces pombe RepID=DUS4_SCHPO Length = 326 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 23/190 (12%) Query: 51 DITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 D AS VD + A + P+ GI + G I S L + Sbjct: 71 DADASLILQFGVDDPVILEKAAQLVGPYVDGIGINCGCPQTWAIQEG-----IGSALLDE 125 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 P + +L E+ V + + ++ K Sbjct: 126 PEKVHKLVRAVKSTL----------GESFCTEVKIRIAKDLNKTRHLMQVIE------KS 169 Query: 170 GAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 GA I ++ + + +L+ +++VR +P++A+G ++ LE + + G Sbjct: 170 GADIITVHGRTRQDRSSFPVNLDAIREVRPCVQIPVVANGDVKSLRKGLEIAKYTETQGI 229 Query: 229 LAASVFHKQI 238 ++A + Sbjct: 230 MSARGLLENP 239 >UniRef50_C8NN95 Dioxygenase n=4 Tax=Corynebacterium RepID=C8NN95_COREF Length = 338 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 19/165 (11%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFG----VQCIVVGIDTWYDAETGKY 140 +++ A +L+ + + P + L A++F + V+ ++ Sbjct: 75 DVDEVAGLLTQAFREYRLGEPVVPAVDLTNGWAEKFHLAVAARPAVISSTFGMFTPD-EF 133 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN------GYDL---- 190 + G E+ VT + ++ GA +V+ G R+ D Sbjct: 134 ATLKQAGIEAWVTVTNEND---ARTAERAGADVLVVQGPEAGGHRSTWSLTEEPDRRSLD 190 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 E L+ V +P++A+GG T E D SVF Sbjct: 191 ELLRAVVGQVRIPVVAAGGVSTREGVQRML-DLGASAVACGSVFL 234 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 10/82 (12%) Query: 36 AKRYAEEGADELVFYDITAS----------SDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 A+ GAD LV A R + V + IP AGG+ + Sbjct: 153 ARTAERAGADVLVVQGPEAGGHRSTWSLTEEPDRRSLDELLRAVVGQVRIPVVAAGGVST 212 Query: 86 LEDAAKILSFGADKISINSPAL 107 E ++L GA ++ S L Sbjct: 213 REGVQRMLDLGASAVACGSVFL 234 >UniRef50_C1EEA5 Dihydrouridine synthase n=1 Tax=Micromonas sp. RCC299 RepID=C1EEA5_9CHLO Length = 465 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 34/96 (35%), Gaps = 1/96 (1%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + + Q GA + L+ + +G E + ++ VP++ +G + Sbjct: 221 LRENLLAAQAGGASFVTLHPRTRAQGYSGHAAWEDIGFAVDLLSVPVVGNGDVTSAALAS 280 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + RD G + + + +A L+ + Sbjct: 281 KMLRDTGCAGVMIGRGAVQDPLVFRRCRAALSDENF 316 Score = 41.8 bits (97), Expect = 0.023, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 4/100 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + G + GA + + T + + +++ +P Sbjct: 209 VKLRSGFDDR--GLLRENLLAAQAGGASFVTLHPRTRAQGYSGHAAWEDIGFAVDLLSVP 266 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITR 115 G + S A+K+L G + I A+ DP + R Sbjct: 267 VVGNGDVTSAALASKMLRDTGCAGVMIGRGAVQDPLVFRR 306 >UniRef50_A7GWT5 NADH oxidase n=7 Tax=delta/epsilon subdivisions RepID=A7GWT5_CAMC5 Length = 343 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 10/114 (8%) Query: 28 IIGDIVPLAKRYAEEGADELVF--------YDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 + D V LAK+ E GA + D A + + V E ++IP Sbjct: 229 DVADSVRLAKQLEELGAAFIHVSAGGLFESVD-DAPKFAPLYQAGYAKAVKEAVNIPVIA 287 Query: 80 AGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 G I + +L G D ++ L +P F + ++ Sbjct: 288 VGLITRASEGEALLLGGACDLVAYGRELLRNPNFAFSAMSIFKEKELIEDAYLR 341 >UniRef50_C1I8I7 N-acetylmannosamine-6-phosphate 2-epimerase n=7 Tax=Firmicutes RepID=C1I8I7_9CLOT Length = 232 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 25/211 (11%), Positives = 59/211 (27%), Gaps = 43/211 (20%) Query: 35 LAKRYAEEGADELV---FYDITASSDGRVVDKSWVSRVAEVIDI--PFCVAGGIKSLEDA 89 +A+ + GA + D+ + + + + + + P+ ++++ Sbjct: 37 MARAAKKAGACAIRTNGVRDVIGIK--KETNLPVIGLIKKSYEGFEPYIT----FTMDEI 90 Query: 90 AKILSFGADKISINSPALADP------TLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 + GAD I+ + I + +++ ++ + + E G Sbjct: 91 DSLAKAGADIIAFDCTLRKRKDGRTVEEFIKAIKEKYPN---ILLMADISNLEEGINAFR 147 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 T +G D E +K + E +P Sbjct: 148 AGVDMVGTTLSG--------------------YTSYT--PKLDGPDYELVKNLVESIDIP 185 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +IA G +E F D + Sbjct: 186 VIAEGRIHYPSQAVEMF-DLGAYAVVVGGAI 215 >UniRef50_A6L5H1 Dihydroorotate dehydrogenase n=7 Tax=Bacteroidales RepID=PYRD_BACV8 Length = 303 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 21/111 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVS 67 + DI +A+ GAD + + IT G + + V Sbjct: 170 VTDITEIARAAEASGADSVSLINTLLGMAVDAEKRRPVLSTITGGMSGAAVKPIALRMVW 229 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 +VA+ ++IP GGI +DA + + GA I I + DP + ++++ Sbjct: 230 QVAKAVNIPVIGLGGIMGWKDAVEFMLAGATAIQIGTANFIDPAITVKVSE 280 >UniRef50_A5ULU9 tRNA-dihydrouridine synthase n=2 Tax=Methanobrevibacter smithii RepID=A5ULU9_METS3 Length = 236 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 4/89 (4%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPFC 78 V+ R + D + +AK GAD L A G D ++++ +I Sbjct: 140 SVKIRANVDGIDTLKIAKLIENTGADYLHI---DAMKVGIFDADYDLLAKICSNTNIKVI 196 Query: 79 VAGGIKSLEDAAKILSFGADKISINSPAL 107 I S + K+L G SI + Sbjct: 197 GNNSIDSEQKIEKMLKTGVFGFSIARAVI 225 >UniRef50_Q2NEG1 PyrD n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NEG1_METST Length = 306 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 23/111 (20%) Query: 29 IGDIVPLAKRYAEEGADELVFYD-------IT------------ASSDG---RVVDKSWV 66 + DI +AK + GAD L + I G + + V Sbjct: 169 VTDITEIAKAAEDAGADALTLINSVGPGLRIDYKTARPILNNVFGGIAGPMIKPIALKCV 228 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD-PTLITRL 116 + E +DIP GGI++ +DA + L GA + I + + + P + + Sbjct: 229 YKTYETVDIPLFGVGGIRTYKDALEFLYAGASLLQIGTSIMYEGPEIFKNI 279 >UniRef50_B5X496 tRNA-dihydrouridine synthase 3-like n=3 Tax=Eukaryota RepID=B5X496_SALSA Length = 654 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 12/158 (7%) Query: 18 VKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITAS-SDGRVVDKSWVSRVAE- 71 VK + +A + + G + + + + D +++ ++ Sbjct: 438 VKIRTGVQEK-----ANIAHKLIPEMKKWGVSMITLHGRSREQRYTKSADWDYINTCSQL 492 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 IP G I S DA K I + AL P + T + +R I Sbjct: 493 ASPIPLFGNGDILSYYDAMKARETDVSGIMLARGALIKPWVFTEIKER-RDWDISSSERL 551 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + Y + + D T+ L+W+ + + Sbjct: 552 DVLRDFTHYGLEHWGSDTQGLEKTRNFLLEWLSFMCRY 589 Score = 46.4 bits (109), Expect = 8e-04, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 66/196 (33%), Gaps = 8/196 (4%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKILS--FGADKISINSPALADPTL 112 G+ + + + R V G ++ A++L+ D + INS D L Sbjct: 347 LQGQSSEWALLKRHESEDLFGVQVEGCFPDTMTRCAELLNNKIDVDFVDINSGCPID--L 404 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + + G+ + V + + + E++K G Sbjct: 405 VYKKGGGCGLMTRTNKFEQIIRGMNSVLDVPLTVKIRTGVQEKANIAHKLIPEMKKWGVS 464 Query: 173 EIVLNMMNQDGVRN-GYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 I L+ +++ D + + + +PL +G + ++A R+ DV G + Sbjct: 465 MITLHGRSREQRYTKSADWDYINTCSQLASPIPLFGNGDILSYYDAMKA-RETDVSGIML 523 Query: 231 ASVFHKQIINIGELKA 246 A + E+K Sbjct: 524 ARGALIKPWVFTEIKE 539 >UniRef50_B9ML92 Ketose-bisphosphate aldolase n=2 Tax=Clostridiales RepID=B9ML92_ANATD Length = 281 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 72/198 (36%), Gaps = 10/198 (5%) Query: 63 KSWVSRVAEVIDIPFCVAGG-IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 S V +++ +++P + K+ E+ K + G + + +L + + + Sbjct: 62 YSLVKVMSKNVEVPVVLHLDHCKTFENIVKAIRAGFTSVMFDGSSLPFKENVEKTKEVV- 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-N 180 I + +AE G + + + T + +E + + + + Sbjct: 121 --KIAHAVGVSVEAELGSIAGGEGSSESDNEETTIYTDPKEAEEFVELTQVDALAVSIGT 178 Query: 181 QDGVRNG---YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 G+ G +++ LK++ +PL+ GG+GT E L+ + + Sbjct: 179 VHGLYTGEPKINIDILKEIASRVQIPLVLHGGSGTPEEILKECIRNGIAKININTEI--S 236 Query: 238 IINIGELKAYLATQGVEI 255 I + ++ L ++ Sbjct: 237 IYTLDKIAEILNENKNKV 254 Score = 40.2 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 11/104 (10%) Query: 24 RNHEIIGDIVPLAKRYAEEGADEL-----VFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 I D + D L + + G ++ + +A + IP Sbjct: 149 EETTIYTDPKEAEEFVELTQVDALAVSIGTVHGL---YTGEPKINIDILKEIASRVQIPL 205 Query: 78 CVAGGIKSLEDA-AKILSFGADKISINSPA-LADPTLITRLADR 119 + GG + E+ + + G KI+IN+ + I + + Sbjct: 206 VLHGGSGTPEEILKECIRNGIAKININTEISIYTLDKIAEILNE 249 >UniRef50_A4RZE7 Predicted protein n=4 Tax=cellular organisms RepID=A4RZE7_OSTLU Length = 355 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 28/207 (13%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +AK Y E GA L G + + + + P I Sbjct: 156 DPVKIAKAYEEGGAACLSVLTDEKFFQGGFENLALIRE--AGVTCPLLCKEFIVDAYQIY 213 Query: 91 KILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 +GAD I + + L + L ++A G++C++ + H Sbjct: 214 LARKYGADAILLIAAVLPNQDLKYFIKIAHSLGMKCLI------------EVHTYGEMKR 261 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVL-NMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 +D + + R G + + D + NG E++K+ + ++ Sbjct: 262 VLDGDF----PIDLL-GINNRDLGTFEVSLSVTTDLM-NGPLGEEVKR----RGITMVGE 311 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVF 234 G T++ +D+ V L Sbjct: 312 SGIFTIDDV-NLLQDSGVGAVLVGESL 337 >UniRef50_C1TMB2 Dihydroorotate dehydrogenase family protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMB2_9BACT Length = 304 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 34/111 (30%), Gaps = 21/111 (18%) Query: 31 DIVPLAKRYAEEGADELVFY-----------------DITASSDGRVVDKSW----VSRV 69 D +A+ + GAD LV D + V +V Sbjct: 173 DPEGVARAAEDSGADALVVANTWLGMAIDVDSRKAVFDRVVAGFSGPAVFPMALRLVWQV 232 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + IP GG+ S D ++ GA + + + D L + Sbjct: 233 SSAVSIPVIGCGGVSSGRDLLSMIMAGATAVELGTGMFRDIRLPENILREV 283 >UniRef50_A3U0T3 Probable dihydroorotate dehydrogenase, catalytic subunit n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0T3_9RHOB Length = 314 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 21/113 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------ITASSDG---------------RVVDKSWVS 67 +GDI +A+ GAD ++ + I A + + V V+ Sbjct: 167 VGDIAEMARCVEGAGADAVITANAILGMAIDAETMTPRLGNVVGGLTGPAVKPVILRMVN 226 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + AE + IP GGI + ED + + GA + I + + + + D Sbjct: 227 QCAEAVKIPVIGCGGIATGEDVVEYMLAGASAVQIGTTNFVHTSAMEQSIDWV 279 >UniRef50_UPI00016A96D1 S-mandelate dehydrogenase (MdlB) n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A96D1 Length = 388 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 36 AKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 A GAD +V + D V ++ VA+ + +P V GI+ ED K L+ Sbjct: 261 ALACVSAGADAIVVSNHGGRQIDSCVSPFDVLAEVADAVRVPVLVDSGIRCGEDVLKALA 320 Query: 95 FGADKISINSPALADPTL 112 GA + + PA+ + Sbjct: 321 MGASLVLVGRPAIYGLAV 338 Score = 40.2 bits (93), Expect = 0.068, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 26/90 (28%), Gaps = 3/90 (3%) Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIA 206 R V GA IV++ + + + L +V + VP++ Sbjct: 246 WPGRLIVKGILRASDALACVSAGADAIVVSNHGGRQIDSCVSPFDVLAEVADAVRVPVLV 305 Query: 207 SGGAGTMEHFLEAFRDADVDGALAAS-VFH 235 G E L+A L + Sbjct: 306 DSGIRCGEDVLKAL-AMGASLVLVGRPAIY 334 >UniRef50_C8PLW3 Putative dihydrouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PLW3_9SPIO Length = 347 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 21/186 (11%), Positives = 51/186 (27%), Gaps = 18/186 (9%) Query: 67 SRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLIT---RLADRFGV 122 + + + G G+ L+ G I ++ A+ Sbjct: 69 EAFVQAVPLVLQQGGIGVD--------LNMGCSAPPIVRTGAGAAWMLKPLNETAEAVRS 120 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + + + + + V G + L + + + G I ++ Q Sbjct: 121 VKQALDVYAAAQSRSFRLSVKLRIGAAADYAY----LLRFCTMLVEEGVQLITIHPRLQR 176 Query: 183 GVRNGYDL-EQLKKVREVCHVPLIASGGAGTMEHFL-EAFRDADVDGALAASVFHKQIIN 240 L E + + +P+ +G + E A R G + ++ Sbjct: 177 QSYARPALHEYTAALAKDLPIPVYGNGDIDSAEKLQTAAARYPACTGWMIGRAAVQKPWI 236 Query: 241 IGELKA 246 E++ Sbjct: 237 FKEIRK 242 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 4/105 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIP 76 VK + ++ EEG + + + S R + + +A+ + IP Sbjct: 140 VKLRIGAAADYAY-LLRFCTMLVEEGVQLITIHPRLQRQSYARPALHEYTAALAKDLPIP 198 Query: 77 FCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADR 119 G I S E + I A+ P + + R Sbjct: 199 VYGNGDIDSAEKLQTAAARYPACTGWMIGRAAVQKPWIFKEIRKR 243 >UniRef50_Q5KC68 tRNA-dihydrouridine synthase 3 n=2 Tax=Filobasidiella neoformans RepID=DUS3_CRYNE Length = 725 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 63/211 (29%), Gaps = 24/211 (11%) Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAKILSF-----GADKISINSPALAD 109 G + + V R VAGG + + A I + G D + +N D Sbjct: 397 YGAKEEWALVRRHESEKMFGVQVAGGFPNRMVPAAEVIANTIGKGGGVDFVDVNMGCPID 456 Query: 110 PTLITRLADRF---GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + + + V TG + V Sbjct: 457 LVFNQGAGSALMDSPGRLGKLLVGMNRALGDIPLTVKFRTGVAHGKPNAHKLIPRF---V 513 Query: 167 QKRGAGEIVLNMMNQDGVRNGY-DLEQLK----KVREVC------HVPLIASGGAGTMEH 215 + GAG + ++ ++ + D E +K +RE VP+ +G + Sbjct: 514 TEWGAGALTIHGRSRQQRYSKPADWEYIKTCVTALRESVADANLPPVPIFGNGDCFSAAS 573 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E + VDG + A + E+K Sbjct: 574 YYEEMDRSGVDGVMVARGALIKPWIFTEIKE 604 Score = 41.8 bits (97), Expect = 0.023, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 15/114 (13%) Query: 21 VQFRNHEIIGDIVP---LAKRYAEEGADELVFYDITAS-SDGRVVDKSWVS----RVAEV 72 V+FR G + + E GA L + + + D ++ + E Sbjct: 492 VKFRTGVAHGKPNAHKLIPRFVTEWGAGALTIHGRSRQQRYSKPADWEYIKTCVTALRES 551 Query: 73 I------DIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADR 119 + +P G S ++ G D + + AL P + T + +R Sbjct: 552 VADANLPPVPIFGNGDCFSAASYYEEMDRSGVDGVMVARGALIKPWIFTEIKER 605 >UniRef50_B1L6Q8 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=GGGPS_KORCO Length = 244 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 19/225 (8%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA+ +E GAD + S + V + +IP + G +++ + Sbjct: 31 KLARAASEGGADLIFV---GGSIGAGFRINEIILSVKKESNIPIILFPG--NVDGVSPYA 85 Query: 94 SFGADKISINSPALADPTLI--TRLADRFGVQCIVVG--IDTWYDAETGKYHVNQYTG-D 148 +NS +P I + ++ + + + E G+ + G Sbjct: 86 DAILFMSLLNST---NPYWIIQAQALAAIPIRRMGLEAIPTAYLIVEPGQRSAAGWVGSV 142 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 R L + + G I L G E ++ VRE ++ +I G Sbjct: 143 NPIPRDKPEIALAYATAAEMLGMRWIYLE--AGSGAEAPVPSEMVRLVRERTNLGIIVGG 200 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQII---NIGELKAYLAT 250 G + E + +A + + + + ++ E+K L + Sbjct: 201 GLRSPE-LVRERAEAGANVIVVGTHIEEGRDALASVREMKEALKS 244 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 2/86 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + A G + + + V V V E ++ V GG++S E + Sbjct: 154 LAYATAAEMLGMRWIYLEAGSGAEA--PVPSEMVRLVRERTNLGIIVGGGLRSPELVRER 211 Query: 93 LSFGADKISINSPALADPTLITRLAD 118 GA+ I + + + + + Sbjct: 212 AEAGANVIVVGTHIEEGRDALASVRE 237 >UniRef50_P47996 Inosine-5'-monophosphate dehydrogenase n=4 Tax=Viridiplantae RepID=IMDH1_ARATH Length = 503 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 39/123 (31%), Gaps = 25/123 (20%) Query: 1 MLA--KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD- 57 M+ K+ P LDV G VV Q A+ + G D L + S Sbjct: 277 MIKYVKKTYPELDVIGGNVVTMYQ-------------AQNLIQAGVDGLRVGMGSGSICT 323 Query: 58 -------GRVVDKSW--VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 GR + V +A IP GGI + K L GA + + S Sbjct: 324 TQEVCAVGRGQATAVYKVCSIAAQSGIPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 383 Query: 109 DPT 111 Sbjct: 384 STE 386 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 38/155 (24%), Gaps = 25/155 (16%) Query: 85 SLEDAAKILSFGADKISINSP---ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 E +++ G + + ++S ++ +I + + ++ G Sbjct: 247 DKERLEHLVNVGVNAVVLDSSQGNSIYQLEMIKYVKKTYPELDVIGGNVVTMYQAQNLIQ 306 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK--KVREV 199 + + V G K + Sbjct: 307 AGVDGLRVGMGSGS-------------------ICTTQEVCAVGRGQATAVYKVCSIAAQ 347 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +P+IA GG H ++A + S Sbjct: 348 SGIPVIADGGISNSGHIVKALV-LGASTVMMGSFL 381 >UniRef50_Q09E70 Thiazole biosynthesis protein ThiG n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09E70_STIAU Length = 274 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + +A+ G L +S +VD + +V + + IP V GG+ S A+ Sbjct: 165 IQVARELERMGCCALRIMAAPVASGRGLVDPKSLRQVLDAVSIPVIVEGGLGSPAQVAQA 224 Query: 93 LSFGADKISINSPALADPTLIT 114 + GAD + +N+ P + Sbjct: 225 MELGADAVLVNTAVAQAPDPVR 246 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 1/77 (1%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + +E+++ G + + R D + L++V + +P+I GG G+ Sbjct: 162 LPDIQVARELERMGCCALRIMAAPVASGRGLVDPKSLRQVLDAVSIPVIVEGGLGSPAQV 221 Query: 217 LEAFRDADVDGALAASV 233 +A + D L + Sbjct: 222 AQAM-ELGADAVLVNTA 237 >UniRef50_B7G230 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G230_PHATR Length = 545 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 78/257 (30%), Gaps = 40/257 (15%) Query: 19 KGVQFRNHEIIGDIVPLA------KRYAEEGAD----ELVFYDITASSDGRVVDKSWVSR 68 K + F + + + + GAD E+ T G+ + + + R Sbjct: 181 KLIDFSKKVYVA-PLTTVGNLPFRRIMKKFGADITCGEMAVA--TNLLSGQSSEWALLKR 237 Query: 69 VAEVIDIPFCVAGGI-----KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 E +A G ++ E D + +N D + G Sbjct: 238 HPEEDIFGVQIAAGYPDVFARTCELIEN--EMNVDFVDLNLGCPLD------IVCNKGSG 289 Query: 124 CIVVGIDTWYDAETGKY----HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI---VL 176 ++ D + + +T+ + VQ++Q G I ++ Sbjct: 290 AALMMRDKRLRSSVEGILETLTCPISIKMRTGWEMTKPFAHNLVQKIQSWGLDGISAVMI 349 Query: 177 NMMNQDGVR-NGYDLEQLKKVREV-----CHVPLIASGGAGTMEHFLEAFRDADVDG-AL 229 + ++ D + + V + +P+I +G + + F E V+ A+ Sbjct: 350 HGRSRLQRYAKEADWDYISMVAKSQDMSLTTIPVIGNGDIFSYQDFEEKIAREGVNSCAM 409 Query: 230 AASVFHKQIINIGELKA 246 A + E+K Sbjct: 410 LARGALIKPWLPTEIKE 426 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 12/154 (7%) Query: 33 VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEV-----IDIPFCVAGGIKSL 86 V + + +G ++ + + + D ++S VA+ IP G I S Sbjct: 333 VQKIQSWGLDGISAVMIHGRSRLQRYAKEADWDYISMVAKSQDMSLTTIPVIGNGDIFSY 392 Query: 87 EDAAKIL-SFGADKI-SINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 +D + + G + + AL P L T + +R I + ++ + Sbjct: 393 QDFEEKIAREGVNSCAMLARGALIKPWLPTEIKER-RHWDISASERLDILKDFARFGMEH 451 Query: 145 YTGDESRTRVTQWETLDW---VQEVQKRGAGEIV 175 + D+ + L+W + G E++ Sbjct: 452 WGTDQQGINNCRRFLLEWLSFLHRYCPVGLLEVL 485 >UniRef50_B8HZW6 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=Bacteria RepID=B8HZW6_CLOCE Length = 329 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 34/102 (33%), Gaps = 12/102 (11%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG--------RVVDKSWVSRVAEVIDI 75 I D + + + G L DI+ G + + E + I Sbjct: 228 EGGITIEDSLIATGEFEKAGVSAL---DISGGFCGYIKPDAKEQGYFWPLTKAIKEHVSI 284 Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 P + GGI E A ++L+ G AD I + L D Sbjct: 285 PVILTGGITDAESAEQLLAGGKADLIGVGRSILKDSGWAAHA 326 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 52/172 (30%), Gaps = 19/172 (11%) Query: 83 IKSLEDA-AKILSFGADKISINSPALADPTLI-----TRLADRFGVQCI--------VVG 128 I S +A ++ G D + I+S + + +D +G + ++ Sbjct: 146 ISSFANAAERVKKAGFDGVEIHSAHGYLLSQFFSPISNKRSDEYGGNVLSRIKIHLQIIN 205 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI-----VLNMMNQDG 183 E + D +T ++L E +K G + + D Sbjct: 206 AVKKAVGEDFTVFLRLGASDYMEGGITIEDSLIATGEFEKAGVSALDISGGFCGYIKPDA 265 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 GY K ++E +P+I +GG E + D Sbjct: 266 KEQGYFWPLTKAIKEHVSIPVILTGGITDAESAEQLLAGGKADLIGVGRSIL 317 >UniRef50_D0P0N4 tRNA-dihydrouridine synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P0N4_PHYIN Length = 480 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 2/89 (2%) Query: 29 IGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 I D V LA+R + GA + + T ++ V + +P G + E Sbjct: 158 IQDTVDLARRLEDAGACAVGVHMRQTHERPHDKASWDRLAPVVSALSVPVLANGDVFMHE 217 Query: 88 DAAKILS-FGADKISINSPALADPTLITR 115 D K+ GA I ALA+P++ + Sbjct: 218 DINKLRKLSGASSFLIARGALANPSIFRK 246 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 39/104 (37%), Gaps = 10/104 (9%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHF 216 +T+D + ++ GA + ++M + ++L V VP++A+G E Sbjct: 160 DTVDLARRLEDAGACAVGVHMRQTHERPHDKASWDRLAPVVSALSVPVLANGDVFMHEDI 219 Query: 217 LEAFRDADVDGALAASVFH--------KQIINIGE-LKAYLATQ 251 + + + L A + + I + ++ YL Sbjct: 220 NKLRKLSGASSFLIARGALANPSIFRKEGRLPIDQVVREYLKAA 263 >UniRef50_A7NSB8 Dihydroorotate dehydrogenase n=2 Tax=Roseiflexus RepID=A7NSB8_ROSCS Length = 268 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 17/109 (15%) Query: 33 VPLAKRYAEEGADELVFYDITASSDG-----------------RVVDKSWVSRVAEVIDI 75 + A+ + GAD + +S R + V+ V + Sbjct: 160 IATARSVVDVGADAVTIAAPPRASAADPHTGELVHGWLSGPAIRPLVLEAVAEVCATLPA 219 Query: 76 PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 P GGI + DA L+ GA + + S LADP R+A+ Sbjct: 220 PVVACGGIVTAADARPFLAAGAIAVQVGSALLADPWAAVRIAEALENAP 268 >UniRef50_Q8CN30 Thiazole synthase n=10 Tax=Staphylococcus RepID=THIG_STAES Length = 255 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSW-VSRVAEVIDIPFCVAGGIKS 85 I + + LA+R E G + + GR ++ +S + E +P V GI S Sbjct: 130 YISNDLVLAQRLEELGVHA--VMPLASPIGTGRGINNPLNLSYIIENASVPVIVDAGIGS 187 Query: 86 LEDAAKILSFGADKISINSPALADPTLIT 114 +DA + GAD I +N+ A + Sbjct: 188 PKDACHAMELGADGILLNTAISAAKDPVK 216 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 3/84 (3%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVCHVPLIASGGAGTMEHFLEAF 220 Q +++ G ++ + G G + L + E VP+I G G+ + A Sbjct: 137 LAQRLEELGVHAVMPLA-SPIGTGRGINNPLNLSYIIENASVPVIVDAGIGSPKDACHAM 195 Query: 221 RDADVDGALAASVFHKQIINIGEL 244 + DG L + + Sbjct: 196 -ELGADGILLNTAISAAKDPVKMA 218 >UniRef50_Q2SS69 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=5 Tax=Mycoplasma RepID=NANE_MYCCT Length = 226 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 67/205 (32%), Gaps = 53/205 (25%) Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK------------SLEDAAKILSFGADK 99 + S R+ + V +V+D+P G IK ++++ +++ D Sbjct: 38 LGGSKVLRLSQVEHIKAVKQVVDVPII--GLIKKHYDNSEVFITPTIKEVDQLVDLKVDI 95 Query: 100 ISINSPALADPT-----LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 I++++ P L+ + ++ Q + + Sbjct: 96 IALDATLRTRPDQDLTNLVKTIKTKYPNQLL----------------------------L 127 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-----LEQLKKVREVCHVPLIASGG 209 +++ Q G I + G++ + L+ +++V P+IA GG Sbjct: 128 ADCSSVEDAINAQNLGFDLIASTLRGSTKQTKGHNNLENNYQFLRDLKKVITKPIIAEGG 187 Query: 210 AGTMEHFLEAFRDADVDGALAASVF 234 T + E + + + + Sbjct: 188 IWTPQQAKEIL-NLGIHSVVVGTAI 211 >UniRef50_C5WZ26 Inosine-5'-monophosphate dehydrogenase n=10 Tax=Magnoliophyta RepID=C5WZ26_SORBI Length = 501 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 71/245 (28%), Gaps = 42/245 (17%) Query: 31 DIVPLAKRYAEEGADE--LV-----FYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGG 82 D A A+EG D LV D+ + D R+ + + + D F VA Sbjct: 179 DFEKAAAFLADEGLDYAPLVSDDGEVVDLITAKDVERIRSYPKLGKPSLGADGKFVVAAS 238 Query: 83 IKSLED----AAKILSFGADKISINSP---ALADPTLITRLADRFGVQCIVVGIDTWYDA 135 I + ED +++ GA+ I I+S ++ +I + ++ G Sbjct: 239 IGTREDDKGRLEQLVKAGANAIVIDSSQGNSIYQLDMIKFAKKMYPEVDLIGGNVVTIAQ 298 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK- 194 + + V G K Sbjct: 299 AQNLIQAGADGLRVGMGSGS-------------------ICTTQEVCAVGRGQATAVYKV 339 Query: 195 -KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF---HK--QIINIGELKAYL 248 + +VP+IA GG H ++A + S H+ + + Sbjct: 340 SSYAKDHNVPVIADGGISNSGHIVKAL-SLGASTVMMGSFLAGSHEAPGTYEYKDGRRVK 398 Query: 249 ATQGV 253 +G+ Sbjct: 399 KYRGM 403 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 23/112 (20%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD----- 57 AK++ P +D+ G VV + A+ + GAD L + S Sbjct: 279 AKKMYPEVDLIGGNVVT-------------IAQAQNLIQAGADGLRVGMGSGSICTTQEV 325 Query: 58 ---GRVVDKSW--VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 GR + VS A+ ++P GGI + K LS GA + + S Sbjct: 326 CAVGRGQATAVYKVSSYAKDHNVPVIADGGISNSGHIVKALSLGASTVMMGS 377 >UniRef50_B0MC46 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MC46_9FIRM Length = 644 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 13/104 (12%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV----------DKSWVSRVAEVI 73 I D V AK + GAD + T S+ G + + ++V + + Sbjct: 228 NGGNKIEDAVVYAKLAEKAGADAIHIS--TGSAAGGNIVTTYYTDPGFNVENAAKVKKAV 285 Query: 74 DIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 +P G I A +I+ G AD IS+ ++ D ++ Sbjct: 286 HVPVICVGRINDPALAEEIIESGQADLISLGRQSICDSEFPNKI 329 >UniRef50_Q1MQG1 Dihydroorotate dehydrogenase n=2 Tax=Deltaproteobacteria RepID=Q1MQG1_LAWIP Length = 314 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 21/114 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD---------------ITASSDG------RVVDKSWVS 67 + DI +AK GAD + + ++ G + + V Sbjct: 180 VTDITIIAKAVESAGADAISCINTLTGMAVDIRKRKSLLSTVIGGLSGPGIKPIALRCVW 239 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V + ++IP GGI S D + + GA + I + P + R+A+ Sbjct: 240 EVCKAVNIPVIGIGGITSARDVLEFILVGAHAVQIGTMNFIQPDIAFRIAEALP 293 Score = 40.2 bits (93), Expect = 0.069, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 24/109 (22%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEI----VLNMMNQD------------GVRNGYD 189 + VT + + V+ GA I L M D G +G Sbjct: 172 VMVKLSPNVTDITII--AKAVESAGADAISCINTLTGMAVDIRKRKSLLSTVIGGLSGPG 229 Query: 190 LEQLK-----KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++ + +V + ++P+I GG + LE F ++ Sbjct: 230 IKPIALRCVWEVCKAVNIPVIGIGGITSARDVLE-FILVGAHAVQIGTM 277 >UniRef50_B1I129 2-nitropropane dioxygenase, NPD n=12 Tax=Bacteria RepID=B1I129_DESAP Length = 315 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 3/113 (2%) Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 I ID + V + + V+ + + +K GA +V + Sbjct: 85 AASIKEKIDVIFTGAGFSRDVFDWGREGRVPIVSIVSSARLAKMAEKLGAAAVVAESGDA 144 Query: 182 DGVRN--GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 G E L ++R ++P+IA+GG + + R DG A+ Sbjct: 145 GGHLGTERSTAEILPEIRSAVNIPVIAAGGIISGRDIADMVR-MGADGVQMAT 196 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 35 LAKRYAEEGADELVFY--DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 LAK + GA +V D + + ++IP AGGI S D A + Sbjct: 125 LAKMAEKLGAAAVVAESGDAGGHLGTERSTAEILPEIRSAVNIPVIAAGGIISGRDIADM 184 Query: 93 LSFGADKISINSPALADPTL 112 + GAD + + + + Sbjct: 185 VRMGADGVQMATRFVLSTEC 204 >UniRef50_A5WFG6 FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WFG6_PSYWF Length = 352 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 65/204 (31%), Gaps = 28/204 (13%) Query: 66 VSRVAEVIDIPFCVAGGIKS-LEDAAKILS----FGADKISINSPALADPTLITRLADRF 120 + + +V P I+ LE A K+L G + I ++A D+ Sbjct: 130 LEDIQQVATTPIWFQLYIQDDLEFAKKVLKQAEAAGCKAVCITLDSVAAAVRNEE--DKV 187 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL-------DWVQEVQKRGAGE 173 G + + D + G+ + E T L + Q GA Sbjct: 188 GFE---LSKDLNMPYKIGRPAPVSWQEVEMLIAYTSLPVLIKGIVNAEDAQRALDIGASG 244 Query: 174 IVLNMMN-QDGVRNGYDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALA 230 I+++ + +E L++V E VP++ GG L+A D L Sbjct: 245 IIVSNHGGRKLDTAPPTIEALQRVAERVDHRVPVLIDGGIRRGTDVLKAL-ALGADAVLL 303 Query: 231 ASVFHKQIINIGELKAYLATQGVE 254 I + ++GV Sbjct: 304 GK-------PIAQALGAAGSEGVA 320 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 10/129 (7%) Query: 33 VPLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLEDA 89 A+R + GA ++ + D + RVAE +D +P + GGI+ D Sbjct: 231 AEDAQRALDIGASGIIVSNHGGRKLDTAPPTIEALQRVAERVDHRVPVLIDGGIRRGTDV 290 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 K L+ GAD + + P I + G + + + + Y Sbjct: 291 LKALALGADAVLLGKP-------IAQALGAAGSEGVAKALKILQHEFEMAMTLTGYNTIN 343 Query: 150 SRTRVTQWE 158 S W+ Sbjct: 344 SIDHSVIWK 352 >UniRef50_B1GZV7 Putative tRNA-dihydrouridine synthase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZV7_UNCTG Length = 320 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 43/148 (29%), Gaps = 3/148 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A + + GAD I +N + +V ++ V Sbjct: 83 AEAAKIVRNSGADIIDVNLGCPVKKVAKAGAGAKLLADEKLVSE--ILESVVKSVDVPVT 140 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + + ++ G + ++ +G DL+ +P+ Sbjct: 141 VKIRTGLLPEHNAATEIIKVAYNCGIKMVAVHARPASQGHSGFPDLKLFAASCAGAKIPV 200 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAAS 232 IA+GG + + R + G + Sbjct: 201 IANGGVVDEKTAADFLRVPNCAGIMIGR 228 Score = 41.8 bits (97), Expect = 0.022, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 28/89 (31%), Gaps = 2/89 (2%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + K G + + AS D + IP GG+ + AA Sbjct: 156 EIIKVAYNCGIKMVAVHARPASQGHSGFPDLKLFAASCAGAKIPVIANGGVVDEKTAADF 215 Query: 93 LSF-GADKISINSPALADPTLITRLADRF 120 L I I AL + ++ RL F Sbjct: 216 LRVPNCAGIMIGRGALGNYSIFKRLEAFF 244 >UniRef50_B9Y4V9 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4V9_9FIRM Length = 291 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 75/216 (34%), Gaps = 14/216 (6%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIP--FCVAGGIKSLEDAAKI 92 + + + A ++ + S+V IP + G ++L+D + Sbjct: 33 VVEEAEAQKAPTIIAIAVNELDFCGPEFYSYVRTRLLESPIPFVLHLDHG-RTLQDILRA 91 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + G + + L I + + +V + E G + Y+ + Sbjct: 92 IQAGFTSVMFDGSELPYEENIRQTKAVVDLAHLVG---VSVEGEVGTIGIMNYSDEGGVD 148 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGY----DLEQLKKVREVCHVPLIAS 207 +T + V K G +V+ + G+ G+ L+ L+++++V VPL+ Sbjct: 149 HITYTRPEEVVDFTAKTGVDSLVVAIGTSHGLYPEGFVPKLQLDLLRELKQVSPVPLVLH 208 Query: 208 GGAGTMEHFLEAFRDADVDGALAA---SVFHKQIIN 240 GG+ + + + A + + +N Sbjct: 209 GGSDNPDEEIRQACQIGIRKVNIASDYKAAYSRKLN 244 >UniRef50_O27697 Tryptophan synthase alpha chain n=3 Tax=Methanobacteriaceae RepID=TRPA_METTH Length = 270 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 71/241 (29%), Gaps = 46/241 (19%) Query: 20 GVQFRNHEIIGDI-----VPLAKRYAEEGADELVF----------------YDITASSDG 58 G F + GD + + + + GAD L D+ A G Sbjct: 18 GCAFVPFVVAGDPDMETSLEIIRTLVDAGADALEVGFPFSDPIADGTSVQGADLRALRAG 77 Query: 59 --RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + RV E IP + + N R Sbjct: 78 MTTEKCFQLIERVREFTSIPIGL-------------------LVYYNLIYRMGVDEFYRR 118 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 A GV I+ +A +Y D+ + + + ++ Sbjct: 119 AAEAGVTGILAADLPPEEASDALRAAEKYDIDQIFIVAPTTGSERLKRISEVSSGFHYLV 178 Query: 177 NMMNQDGVRNGYD---LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++M G R+ + +E +K+V+ +P++ G EH RDA DG + S Sbjct: 179 SVMGVTGARSRVEDATIELIKRVKAEGSLPVMVGFGVSRPEHV-RMLRDAGADGVIVGSA 237 Query: 234 F 234 Sbjct: 238 I 238 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 2/71 (2%) Query: 40 AEEGADELV-FYDITASSDG-RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA 97 G LV +T + + RV +P V G+ E + GA Sbjct: 170 VSSGFHYLVSVMGVTGARSRVEDATIELIKRVKAEGSLPVMVGFGVSRPEHVRMLRDAGA 229 Query: 98 DKISINSPALA 108 D + + S + Sbjct: 230 DGVIVGSAIID 240 >UniRef50_A8MJK5 Dihydroorotate dehydrogenase family protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJK5_ALKOO Length = 372 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 21/100 (21%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDG---------------------RVVDKSWVSRV 69 ++V LA+ + GA + D S G R + + ++ + Sbjct: 167 NVVKLARAAEKAGASAISGIDTVRSIAGVDIEKGRVLLPTFGGYSGDAIRPIGLAAIASI 226 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 A+ IP C GGI + E + + GA + + + + + Sbjct: 227 AQATSIPICGIGGITNYEHILEYMMLGASTVQVCTSIILN 266 >UniRef50_C2KW54 Dihydrouridine synthase, DuS n=1 Tax=Oribacterium sinus F0268 RepID=C2KW54_9FIRM Length = 323 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 2/94 (2%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 T E + EI+++ Q +G +L + + + +PL+ +G T Sbjct: 142 NTDGEWEELFAVFNHFPFSEIIVHPRTQKQYYSGRVNLHCFQNICKYSKLPLVYNGDVET 201 Query: 213 MEHFLEAFRD-ADVDGALAASVFHKQIINIGELK 245 E L ++ G + E + Sbjct: 202 REDILFLQEQFPEIQGIMCGRGLLSNPALFREAR 235 >UniRef50_Q47CU3 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47CU3_DECAR Length = 224 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 21/139 (15%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV-- 142 A +L+ GA ++ I AL D +I RL ++G + I + + A + Sbjct: 43 DETRAEVLLAAGARQVLIGEAALLDSGIIERLVAKYGKERIGLAVPVRNLAVDWAFETVS 102 Query: 143 -------------NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN-MMNQDGVRNGY 188 + + T W+ ++ ++GA ++L + D Sbjct: 103 NADFKVVTPSICEPTWEVLRADGSGTGTHAEWWIGQMVEQGAHTVLLLADIEND-----S 157 Query: 189 DLEQLKKVREVCHVPLIAS 207 DL + E L + Sbjct: 158 DLNLCAGLVEKLGTQLWVA 176 >UniRef50_A6W1E8 Dihydrouridine synthase DuS n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W1E8_MARMS Length = 335 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 30/94 (31%), Gaps = 1/94 (1%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFL 217 D V ++ G G + ++ + E++ +++ + ++A+G + L Sbjct: 168 LFDNVAAIEAAGVGTLTIHGRTKKDGYKPPARWEKIGEIQAKTKMTVVANGDITDTKSLL 227 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + +++ L Q Sbjct: 228 RCQSITGCQHFMIGRGSLNNPFVFQQIRKELNGQ 261 >UniRef50_C4ZIN5 Putative uncharacterized protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZIN5_THASP Length = 234 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 61/184 (33%), Gaps = 26/184 (14%) Query: 76 PFCVAGGIK-----SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 P GGI AA +L GA ++ + L+D L RLA RFG+ + + + Sbjct: 36 PLVEDGGIAILRQGDETRAAALLEAGAPQVLLGEAVLSDADLPLRLAARFGLDRVGLFVP 95 Query: 131 TWYDAETGKYHV---------------NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 A + + + + T W+ E++KRG ++ Sbjct: 96 ARRMAVSWSFDTVSNADFRVVTPSLCEPGWEIVRADGSATGIRVDWWLGEMKKRGIATVL 155 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + Q V + DL + E IA GG + R V + Sbjct: 156 V----QVDVLDDTDLNLCAGLVEALGEGFWIAPGGQFEPA-LADWVRYGKVTRIALPTAL 210 Query: 235 HKQI 238 ++ Sbjct: 211 FERR 214 >UniRef50_C8QWB5 Dihydrouridine synthase DuS n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QWB5_9DELT Length = 335 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Query: 34 PLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-LEDAAK 91 + G D L + + GR WV +V + IP GGI S + AA Sbjct: 162 AFCLLLEDAGVDLLTVHARLRGEPYGRKPRWEWVGKVKHWLRIPVVANGGIFSAADAAAC 221 Query: 92 ILSFGADKISINSPALADPTLITRLADRF 120 + + GAD + I A A P L +LA+ + Sbjct: 222 LAASGADGLMIGRAAAATPWLFRQLAEGW 250 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 10/88 (11%), Positives = 28/88 (31%), Gaps = 1/88 (1%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ-DGVRNGYDLEQLKKVREVCHVPLI 205 + + ++ G + ++ + + E + KV+ +P++ Sbjct: 148 KIRLGEELNAERLRAFCLLLEDAGVDLLTVHARLRGEPYGRKPRWEWVGKVKHWLRIPVV 207 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASV 233 A+GG + + DG + Sbjct: 208 ANGGIFSAADAAACLAASGADGLMIGRA 235 >UniRef50_A9LZ84 Inosine-5'-monophosphate dehydrogenase n=57 Tax=cellular organisms RepID=A9LZ84_NEIM0 Length = 498 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 47/172 (27%), Gaps = 27/172 (15%) Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 V G + E ++ G D I +++ +I R+ Sbjct: 235 VGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRV--------------------RW 274 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKR-----GAGEIVLNMM-NQDGVRNGYDLEQ 192 + T LD V G G I + GV + Sbjct: 275 VKETYPHIQVIGGNIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHN 334 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + + + VPLIA GG +A A + +F GE+ Sbjct: 335 VAEALKGTGVPLIADGGIRFSGDIAKAL-AAGAYSVMLGGMFAGTEEAPGEI 385 >UniRef50_B2A0N8 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0N8_NATTJ Length = 331 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 11/99 (11%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-------RVVDKSWVSRVAEVID 74 + + D + +AK G D D++ G + + + + Sbjct: 224 GYDKGLTMPDAIWIAKELVRNGVD---IIDVSGGHGGYRGHTRSQGYFVPIAVEIKQNLT 280 Query: 75 IPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTL 112 P VAGGI S + A +++ G D + + L+ P Sbjct: 281 QPVMVAGGISSPQYANEVIEEEGLDFVGVGRALLSRPDW 319 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 39/133 (29%), Gaps = 10/133 (7%) Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ----- 181 V D D +T + + +E+ + G I ++ Sbjct: 202 VASDLKEVVGNKLLLYRLGATDGYDKGLTMPDAIWIAKELVRNGVDII---DVSGGHGGY 258 Query: 182 --DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 GY + ++++ P++ +GG + ++ E + +D + Sbjct: 259 RGHTRSQGYFVPIAVEIKQNLTQPVMVAGGISSPQYANEVIEEEGLDFVGVGRALLSRPD 318 Query: 240 NIGELKAYLATQG 252 K L + Sbjct: 319 WPYMAKQELINRK 331 >UniRef50_D1CBJ1 Tryptophan synthase alpha chain n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBJ1_THET1 Length = 279 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 36/249 (14%), Positives = 73/249 (29%), Gaps = 59/249 (23%) Query: 33 VPLAKRYAEEGADELVF--------YD---ITASSDGRVVD-------KSWVSRVAEVID 74 V +AK YAE GAD + D I +S+ + + +A + Sbjct: 34 VEIAKMYAETGADIIELGVPFSDPLADGPTIQRASNRALANGTTLRSSLEVAENIAREVS 93 Query: 75 IPF--------CVAGGI-KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 IP + G+ + +DA+ + G + I + ++ + + V + Sbjct: 94 IPIVMMSYYNPILRYGVQRFFQDAS---NSGISAVIIPDLLPEESEEVSTYSSEYEVGLV 150 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGV 184 + + + + + + L + Sbjct: 151 FLVA-----------------------PTSTVDRIKLAAQAANAFLYCVSLTGVTGARDS 187 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF---HKQIINI 241 Y L+ VR +PL+ G +H + + DG + AS + + Sbjct: 188 LPDYLEPFLRTVRGQTDLPLVVGFGISKPDHIRQLHQF--ADGVVVASAIISMIENSPSW 245 Query: 242 GELKAYLAT 250 E L Sbjct: 246 QEALDSLRA 254 >UniRef50_C9ZWQ2 tRNA-dihydrouridine synthase 1, putative n=2 Tax=Trypanosoma brucei RepID=C9ZWQ2_TRYBG Length = 520 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 6/92 (6%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGR---VVDKSWVSRVAEVI--DIPFCVAGGIKSLE 87 + A+ + G L + T + G+ D + RV E + IP G + + E Sbjct: 238 LKYAEMLRDTGIYVLCVHGRTRENKGQQQQPADLRMIRRVHEHLRGSIPIIANGNVLTFE 297 Query: 88 DAAKILS-FGADKISINSPALADPTLITRLAD 118 D + L+ G + P L DP L LA Sbjct: 298 DVPRNLAITGCEGYMCAEPLLWDPKLFAPLAS 329 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 5/77 (6%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQD---GVRNGYDLEQLKKVREVC--HVPLIASGGAGTME 214 L + + ++ G + ++ ++ + DL +++V E +P+IA+G T E Sbjct: 238 LKYAEMLRDTGIYVLCVHGRTRENKGQQQQPADLRMIRRVHEHLRGSIPIIANGNVLTFE 297 Query: 215 HFLEAFRDADVDGALAA 231 +G + A Sbjct: 298 DVPRNLAITGCEGYMCA 314 >UniRef50_B8LBY8 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LBY8_THAPS Length = 242 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 6/99 (6%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLN-----MMNQDGVRNGYDLEQLKKVREVCH 201 TLD+V+ + K GA I ++ + R +E ++++++ Sbjct: 141 KIRLLDPDNPKPTLDFVRALIKAGANAIAIHGRIVGDESHTMARWETLIEVVRQLKQTES 200 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAAS-VFHKQII 239 VP+I +G T E DG + A + I Sbjct: 201 VPIIVNGDLYTRADIQEMKSRTGCDGVMLARPALYNISI 239 Score = 47.2 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 36/100 (36%), Gaps = 9/100 (9%) Query: 25 NHEIIGDI---VPLAKRYAEEGADELVFY-----DITASSDGRVVDKSWVSRVAEVIDIP 76 + + + + GA+ + + D + + V ++ + +P Sbjct: 143 RLLDPDNPKPTLDFVRALIKAGANAIAIHGRIVGDESHTMARWETLIEVVRQLKQTESVP 202 Query: 77 FCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITR 115 V G + + D ++ G D + + PAL + ++ + Sbjct: 203 IIVNGDLYTRADIQEMKSRTGCDGVMLARPALYNISIFRK 242 >UniRef50_C8SAQ9 CO dehydrogenase/acetyl-CoA synthase, delta subunit n=3 Tax=Archaea RepID=C8SAQ9_FERPL Length = 455 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 13/137 (9%) Query: 1 MLAKRIIPCLDVRDGQ--VVKGVQFRNHEIIGDIVPLAKRYAEE-GAD--ELVFYDITAS 55 M +I +DV D + + K V+ +++ D A++ E GAD L Sbjct: 166 MPHLPVI-AIDVFDRRPMLAKAVREHYEDVLDDPAEWARKAVREFGADLVTLHLISTDPL 224 Query: 56 SDGRVVDKSW--VSRVAEVIDIPFCVAGG---IKSLEDAAKILS-FGADKISINSPAL-A 108 D R ++ V V + + +P + G K E K +++ + S L Sbjct: 225 LDDRPASEAAKTVEEVLQAVKVPLIIGGSGNKEKDPEVLEKAAEVAEGERVMLASATLDM 284 Query: 109 DPTLITRLADRFGVQCI 125 D I A ++G + Sbjct: 285 DWERIGNAAKKYGHVVL 301 >UniRef50_Q7NTY1 GMP reductase n=1 Tax=Chromobacterium violaceum RepID=GUAC_CHRVO Length = 316 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 46/179 (25%), Gaps = 20/179 (11%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDI-----------VPLAKRYAEEGADELVFYDITA--- 54 LD+ + VK + H A+ G D + I Sbjct: 116 TLDIANAWCVKAERMIKHIKQHFPNTFLIGGNVATAEAARDLEAWGCDAIK-AGIAGGRV 174 Query: 55 --SSDGRVVDKSWVSRVAE---VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 + + + VS V + + IP GGI D AK L GA + S Sbjct: 175 CITKNKTGFHRPMVSTVRDCVAAVTIPVIADGGIVEHGDIAKALVCGATMVMAGSLFAGY 234 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + + G + +V + +++Q Sbjct: 235 DESAGDIVEIAGKHYKEYFGSASQFNKGAYVNVEGKKILVEYKGSMGKLLRELQEDLQS 293 >UniRef50_D2VK62 Dihydrouridine synthase, DuS n=1 Tax=Naegleria gruberi RepID=D2VK62_NAEGR Length = 388 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 3/81 (3%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNM--MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 T T++ +++Q G I ++ + Q + + V ++ VP+IA+G Sbjct: 198 DTTENTIELYEKLQATGVTAICVHARYIPQRPREKAHSH-LVDPVSKITKVPIIANGDVF 256 Query: 212 TMEHFLEAFRDADVDGALAAS 232 E + A Sbjct: 257 KPEDIDRIKDLTGCSSVMIAR 277 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 38/105 (36%), Gaps = 3/105 (2%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAE 71 + G+ V + R + + + L ++ G + + R V V++ Sbjct: 185 KHGKPV-TCKIRLLDTTENTIELYEKLQATGVTAICVHARYIPQRPREKAHSHLVDPVSK 243 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 + +P G + ED +I G + I A+ + ++ + Sbjct: 244 ITKVPIIANGDVFKPEDIDRIKDLTGCSSVMIARGAMWNLSIFRK 288 >UniRef50_A5N0D9 Predicted enoate reductase n=2 Tax=Clostridium kluyveri RepID=A5N0D9_CLOK5 Length = 704 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 10/98 (10%) Query: 29 IGDIVPLAKRYAEEGADELVF--------YDITASSDGRVVDKSWV-SRVAEVIDIPFCV 79 + D V +AK GAD + + IT + + ++ V + + IP Sbjct: 289 LNDGVEIAKSLEAYGADAINVTTGNSDTQFMITEPISFQPGWRKYLSKAVKDAVHIPVIS 348 Query: 80 AGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 G I++ E A ++L G D I + P LADP + Sbjct: 349 VGVIRTPEQAEQLLLEGDQDFIGLARPLLADPDWAVKA 386 >UniRef50_C3Q9B4 Dihydrouridine synthase n=18 Tax=Bacteroidales RepID=C3Q9B4_9BACE Length = 315 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 2/84 (2%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEH 215 E L + + ++V++ G DL+ + + VC PLI +G ++E Sbjct: 146 EECLKLAPIINELPLRQVVMHPRLGKQQYKGEVDLKAFEAFQGVCKHPLIYNGDINSVED 205 Query: 216 FLEAFRD-ADVDGALAASVFHKQI 238 + G + Sbjct: 206 IHRIQEQFPGLAGMMIGRGLLANP 229 >UniRef50_C8PVF7 2-nitropropane dioxygenase, NPD n=3 Tax=Proteobacteria RepID=C8PVF7_9GAMM Length = 352 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 40/153 (26%), Gaps = 13/153 (8%) Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 G + I + P + A ++ VV + V + Sbjct: 100 YQELGLTQDEIATTGGRQPFTHEQAALLADLKVPVVSFHFGLPDKALLNIVKKSGAIVIS 159 Query: 152 TRVTQWETLDW---------VQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV 202 + T E Q ++ G + L +QD L + + Sbjct: 160 SATTPAEARWLQANGADMIIAQGLEAGGHRGMFL---SQDVTLQAGTFSLLPNIIRSVSL 216 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 P+IA+GG AF + F Sbjct: 217 PVIAAGGISDNATAQAAF-AIGASAVQVGTAFL 248 Score = 45.6 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 11/86 (12%) Query: 32 IVPLAKRYAEEGADELVFYDIT-ASSDG---------RVVDKSWVSRVAEVIDIPFCVAG 81 A+ GAD ++ + G + S + + + +P AG Sbjct: 164 PAE-ARWLQANGADMIIAQGLEAGGHRGMFLSQDVTLQAGTFSLLPNIIRSVSLPVIAAG 222 Query: 82 GIKSLEDAAKILSFGADKISINSPAL 107 GI A + GA + + + L Sbjct: 223 GISDNATAQAAFAIGASAVQVGTAFL 248 >UniRef50_Q3ABS1 Indole-3-glycerol phosphate synthase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=TRPC_CARHZ Length = 264 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 36/207 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D +A+ YA+ GA + G ++ V V+ +P I Sbjct: 76 DPEEVAQVYAKSGAAAISVLTEEDYFLGSP---EYLKAVRAVVSLPILRKDFILDPYQIY 132 Query: 91 KILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD + + + LA L ++ + G++ +V Sbjct: 133 EAKVLGADAVLLITSLLASVELKEMIKITEGLGMEALV---------------------- 170 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVCHVPLIAS 207 + +L+ V++ GA I +N + D+ L V + V +++ Sbjct: 171 -------EAHSLEEVEKALTAGARLIGINNRDLRTFATNIDVSLKLAPVLKEAGVVMVSE 223 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVF 234 G + E +A A G L Sbjct: 224 SGIRSKEDI-KALMTAGYHGILIGEAL 249 >UniRef50_C1XIL7 NADH:flavin oxidoreductase n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XIL7_MEIRU Length = 775 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 12/105 (11%) Query: 30 GDIVPLAKRYAEEGADELVFYDIT--------ASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 D V +A+ + E G D D++ GR+ + R+ + I G Sbjct: 643 DDAVEIARLFKEAGCD---LIDVSSGQTTRQARPVYGRMYQTPFADRIRNEVGIATMAVG 699 Query: 82 GIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCI 125 I + I++ G AD +I P LADP A R G I Sbjct: 700 AIYEADHVNSIIAAGRADLCAIARPHLADPHWTLNQAARLGYTEI 744 >UniRef50_B1MZ73 Dihydroorotate dehydrogenase B, catalytic subunit n=1 Tax=Leuconostoc citreum KM20 RepID=B1MZ73_LEUCK Length = 306 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 21/116 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFY--------DI----------TASSDG---RVVDKSWVS 67 + DI P+ K GAD +V D+ T G + +V Sbjct: 173 VTDIKPIVKAVETAGADGIVLINTVVGMSLDLNTRQARLARGTGGMSGTSVHPIAVRFVY 232 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 A+ + IP GG+ +++D +++ GA + I + + ++ + Sbjct: 233 ETAQTVSIPVIGVGGVSTVDDVLELMMAGASAVQIGTALAGNHQVMADIIRELPSA 288 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 19/54 (35%), Gaps = 1/54 (1%) Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + + +P+I GG T++ LE A + + ++ L Sbjct: 233 ETAQTVSIPVIGVGGVSTVDDVLE-LMMAGASAVQIGTALAGNHQVMADIIREL 285 >UniRef50_A5D1S4 Indole-3-glycerol phosphate synthase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1S4_PELTS Length = 259 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 59/206 (28%), Gaps = 34/206 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y E GA + GR D + V +P I Sbjct: 69 DPLRMAQEYGEAGAAAISVLTEERFFLGRPSD---LVSVRSETALPVLRKDFIIDPYQIF 125 Query: 91 KILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD + + + L L + LAD G+ C++ Y Sbjct: 126 ESRVLGADAVLLIAAVLQGGQLAELKALADELGMSCLIEVHT----------EAELYRSL 175 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 + + D +N+ + K+ + V +++ Sbjct: 176 SAGAEIIGINNRDL----------GTFKTDLNKTLTLS--------KLIDGQKVTVVSES 217 Query: 209 GAGTMEHFLEAFRDADVDGALAASVF 234 G + E ++ V AL Sbjct: 218 GIRSRNDI-EMLKECGVHAALVGEAL 242 >UniRef50_Q03NV8 Inosine-5'-monophosphate dehydrogenase n=14 Tax=Bacteria RepID=Q03NV8_LACBA Length = 379 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 54/163 (33%), Gaps = 17/163 (10%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + + A+ +L+ GAD I I++ ++ ++A+ + + Sbjct: 123 TFDRASALLNAGADAIIIDTAHGHSAGVLRKVAE------------IRHQLPDATL-IAG 169 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVP 203 TR +D V+ G G I + GV + +V P Sbjct: 170 NVATGEGTRALFEAGVDVVK--VGIGPGSICTTRVVAGVGVPQLTAIYDAAQVAREFGKP 227 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +IA GG ++A + + S+F G++ Sbjct: 228 IIADGGMKYSGDIVKALAAGG-NAVMFGSMFSGTDEAPGDIIE 269 >UniRef50_C7PJL9 2-nitropropane dioxygenase NPD n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJL9_CHIPD Length = 353 Score = 47.2 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 40/137 (29%), Gaps = 12/137 (8%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKS-----------WVSRVAEVIDIPFCVAG 81 V A + GAD +V I + R V + + IP AG Sbjct: 161 VQEAVLVEKAGADAVVAQGIE-AGGHRGSFLDDEPLPMVGTFVLVPEIVAHVKIPVIAAG 219 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 GI+ GA + I + +A + + + + V A +G++ Sbjct: 220 GIRGGSTIRAAFQLGAKAVQIGTAFIASQESLAIASYKTALPKAQVTDSALTRAFSGRWA 279 Query: 142 VNQYTGDESRTRVTQWE 158 + + Sbjct: 280 RGIRNQFMDTVEASGLK 296 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 58/207 (28%), Gaps = 32/207 (15%) Query: 63 KSWVSRVAEVIDIPFCVA---GGI-----KSLEDAAKILSF-------GADKISINSPAL 107 + + + + PF V G+ E L G +++S+++ Sbjct: 55 RELIRKTKSLTAKPFAVNLFTNGVPDYSRADAEAMQDFLEAFSKENQLGFERLSLDALRF 114 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 ++ VV + Q T + E + V+ Sbjct: 115 YSYK--EQIDILIAEAIPVVSFTFGIPDAESMTALKQKGIVLVGTATSVQEAV----LVE 168 Query: 168 KRGAGEIVLNMMNQDGVRNGY----------DLEQLKKVREVCHVPLIASGGAGTMEHFL 217 K GA +V + G R + + ++ +P+IA+GG Sbjct: 169 KAGADAVVAQGIEAGGHRGSFLDDEPLPMVGTFVLVPEIVAHVKIPVIAAGGIRGGSTIR 228 Query: 218 EAFRDADVDGALAASVFHKQIINIGEL 244 AF+ + F ++ Sbjct: 229 AAFQ-LGAKAVQIGTAFIASQESLAIA 254 >UniRef50_Q0A6E8 Indole-3-glycerol phosphate synthase n=5 Tax=Proteobacteria RepID=Q0A6E8_ALHEH Length = 267 Score = 47.2 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 52/211 (24%), Gaps = 37/211 (17%) Query: 27 EIIGDIVPLAKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 D +A+ Y GA L D G +P I Sbjct: 74 RDPYDPATIARGYEAAGAACLSVLTDCD-FFQGDDEHLRVARA---ACGLPVLRKDFIID 129 Query: 86 LEDAAKILSFGADKISINSPALAD--PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 + GAD + + + AL D + LA G+ +V D A + Sbjct: 130 PWQVLEARMLGADCVLLIAAALDDGRMAELHDLAGSLGMDVLVEVHDADELARAARLKPR 189 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 + R + + + + AG +++ Sbjct: 190 LLGINNRDLRTFETRLETTLDLLHQVPAGSLLVTE------------------------- 224 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVF 234 G T R A VD L F Sbjct: 225 ----SGIHTPADVARM-RAAGVDAFLVGEAF 250 >UniRef50_B3RND8 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RND8_TRIAD Length = 519 Score = 47.2 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 48/160 (30%), Gaps = 8/160 (5%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA+ + D I + + + I A Q + I D Sbjct: 98 QAAERVDSLCDAIDLTLHSETNAKTILNQAVGKDFQLLQRMISLLRDNLNMPVACKIKIA 157 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 + + + + + ++ G + + +++ D +K V++ +P+ A Sbjct: 158 ADKDSS----SLIKYAKRLESAGCQLLSIGCRHKEPRFRLDDWNIVKAVKDSVVIPVFAC 213 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 T+ G ++ H + ++K Sbjct: 214 SDISTLAEADLCLEYTGAQGIMS----HDTELYYRQIKTI 249 Score = 41.8 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 1/77 (1%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 + ++ AKR G L R+ D + V V + + IP I + Sbjct: 159 DKDSSSLIKYAKRLESAGCQLLSIGCRHKEPRFRLDDWNIVKAVKDSVVIPVFACSDIST 218 Query: 86 LEDAAKILS-FGADKIS 101 L +A L GA I Sbjct: 219 LAEADLCLEYTGAQGIM 235 >UniRef50_A1RZ33 Inosine-5'-monophosphate dehydrogenase n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ33_THEPD Length = 349 Score = 47.2 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 51/172 (29%), Gaps = 20/172 (11%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 +V +++ ++P VA G E +K L GA I I++ G Sbjct: 87 EYVKKISGE-NLPVGVAVGPFDDERVSKALDAGASIIVIDTA--------------HGHS 131 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN-MMNQD 182 V+ Y + E+ + + V G G + Sbjct: 132 RNVLEATRRYAGMGAEVMAGNIVTAEAALDLIGAGAVSLRVGV---GPGHACTTREVAGV 188 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 G + ++ V ++A GG ++A A D + + Sbjct: 189 GYPQLSAVAKVADAARSHGVSVVADGGIEKPADIVKAL-AAGADAVMLGYLL 239 >UniRef50_Q97F34 Thiamine monophosphate synthase n=1 Tax=Clostridium acetobutylicum RepID=Q97F34_CLOAB Length = 195 Score = 47.2 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 4/94 (4%) Query: 33 VPLAKRYAEEGADELVFYDI--TASSDG-RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + AKR E GAD ++ +I TA G + +V+ +++ I IP GGI S E+ Sbjct: 103 LEEAKRAEENGADYVLAGNIYETACKPGLKGRGLEFVNSISKNITIPEIAIGGI-SEENV 161 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQ 123 ++++ GA+ ++ S A+ +P +I ++ + + Sbjct: 162 QELINSGANGAAVMSSAMKNPAVIKKIIGKLNKK 195 Score = 40.2 bits (93), Expect = 0.062, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 57/178 (32%), Gaps = 17/178 (9%) Query: 89 AAKILSFGADKISINSPALADPTLIT-----RLADRFGVQCIVVGIDTWYDAETGKYHVN 143 K+L +GA + + L L + ++V E Y + Sbjct: 20 VEKVLKYGACSVILREKDLGYDELYEIAKKIKFITDKHSAKLIVNGSLRVAEEVKAYAYH 79 Query: 144 Q-------YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM---NQDGVRNGYDLEQL 193 G + +L+ + ++ GA ++ + G LE + Sbjct: 80 SSFVNFINNGGSKIIKNGVSIHSLEEAKRAEENGADYVLAGNIYETACKPGLKGRGLEFV 139 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + + +P IA GG E ++ ++ +GA S K I ++ L + Sbjct: 140 NSISKNITIPEIAIGGIS--EENVQELINSGANGAAVMSSAMKNPAVIKKIIGKLNKK 195 >UniRef50_A2TQS9 2-nitropropane dioxygenase n=4 Tax=Flavobacteriales RepID=A2TQS9_9FLAO Length = 317 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 52/160 (32%), Gaps = 20/160 (12%) Query: 84 KSLEDAAKIL-SFGADKI---------SINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 +++E+ + A K+ +N + P + + +G+D Sbjct: 50 RTIEELKAAITELKAAKVPGGAFGINLIVNKSNMKYPAQLEAACE--------LGVDFII 101 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE-Q 192 + V + + L + ++V+ G +V G R E Sbjct: 102 TSLGSPRMVIEKAKPKGIKVFCDVTDLSYSKKVEAMGCDALVAVNNQAGGHRGNIAPEAL 161 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +K++ E C +P+I +GG A GA S Sbjct: 162 IKELNENCAIPVITAGGVANKSDLDRAM-SFGAIGASIGS 200 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Query: 37 KRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 K+ G D LV + G + ++ + + E IP AGG+ + D + +SF Sbjct: 132 KKVEAMGCDALVAVNNQAGGHRGNIAPEALIKELNENCAIPVITAGGVANKSDLDRAMSF 191 Query: 96 GADKISINSPALADPT-----LITRLADRFGVQCIVVG 128 GA SI SP +A + FG + IV+ Sbjct: 192 GAIGASIGSPFIASEEAPVSQEYKQACVDFGAKDIVMT 229 >UniRef50_C2CLX0 Possible 2-nitropropane dioxygenase n=7 Tax=Corynebacterium RepID=C2CLX0_CORST Length = 330 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 7/55 (12%) Query: 188 YDLEQLKKVREVCH-------VPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 D L+++ H +PLIA+GG + A V S F Sbjct: 178 PDWRPLEELVFAVHAALGDAPIPLIAAGGMRSSADVERALAWPGVVAVSCGSAFL 232 >UniRef50_B0NDA0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDA0_EUBSP Length = 229 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 57/193 (29%), Gaps = 32/193 (16%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAKILSFGADKISINSPALADPT 111 ++ R K + + +D+P GI + E K+ I Sbjct: 41 GAAGIRANTKEDIKEIQSQVDLPVI---GIVKRDYE---------GSKVYITPT------ 82 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW-----ETLDWVQEV 166 + + + V ++ +D D G ++Q+ G Q T++ Sbjct: 83 -MKEIDELMEVGPEIIAVDATSDLRPGNITIDQFFGQIKEKYPDQLLMADCSTIEEAIHA 141 Query: 167 QKRGAGEIV-----LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + G I ++ D E L+K+ +IA G T + Sbjct: 142 DELGFDFIGTTMVGYTDQSKGDRIEENDFEILRKIVSNVKNKVIAEGNINTPQKARRVI- 200 Query: 222 DADVDGALAASVF 234 + + S+ Sbjct: 201 ELGAFSVVVGSII 213 >UniRef50_O53835 Probable tRNA-dihydrouridine synthase n=107 Tax=Actinobacteria (class) RepID=DUS_MYCTU Length = 389 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 3/75 (4%) Query: 49 FYDITAS-SDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSF-GADKISINSP 105 + TA+ D ++R+ + + IP G I DA ++S G D + I Sbjct: 191 LHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRG 250 Query: 106 ALADPTLITRLADRF 120 L P L L+ F Sbjct: 251 CLGRPWLFAELSAAF 265 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 2/71 (2%) Query: 176 LNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 L+ +G D EQ+ ++++ +P++ +G L DG + Sbjct: 191 LHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRG 250 Query: 234 FHKQIINIGEL 244 + EL Sbjct: 251 CLGRPWLFAEL 261 >UniRef50_O50316 Inosine-5'-monophosphate dehydrogenase n=1298 Tax=root RepID=IMDH_CHLP8 Length = 494 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 64/229 (27%), Gaps = 30/229 (13%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSR-----VAEVIDIPFCVAG--GI 83 D++ + + ++L+ D G + K R + + V GI Sbjct: 170 DLLAAEEILMQNKIEKLLVIDEEGYLKGLITFKDIQKRKQCPDACKDMHGRLRVGAAVGI 229 Query: 84 K--SLEDAAKILSFGADKISINSPALAD---PTLITRLADRFGVQCIVVGIDTWYDAETG 138 + ++ ++ G D +++++ ++ + +++ ++ G Sbjct: 230 RSNTITRVDALVEAGVDVVAVDTAHGHSQAVLDMVATIKEKYPELEVIAG------NVAT 283 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVRE 198 V + G G L + Sbjct: 284 PEAVRDLVKAGADAVKVGIGPGSICTTRVVAGVGMPQLTAIMNCAKE-----------AA 332 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 P+IA GG +A A D + S+F + GE Y Sbjct: 333 KTDTPIIADGGIKYSGDISKAL-AAGADTVMMGSIFAGTDESPGETILY 380 >UniRef50_B5QYH8 Putative uncharacterized protein n=27 Tax=Bacteria RepID=B5QYH8_SALEP Length = 287 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 83/262 (31%), Gaps = 56/262 (21%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADEL---VFYDITASSDGRVV-DKS 64 + + GQ + I GD LAK E G L + + + V + Sbjct: 28 AITLHGGQTILSTG-----ITGDDARLAKAVCEAGVKLLEPNHPA-LALARGHKGVSNMH 81 Query: 65 WVSRVAEVI------------------DIPFCVA--GGIK-------SLEDAAKILSFGA 97 ++ I DI V GG S + +I GA Sbjct: 82 AAEQIRHEITNSQMAEAVHGVRNVVPDDIFITVGIAGGFTETLPVPLSETEILEIARAGA 141 Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 D + + D I LA ++G + +D + T Sbjct: 142 DGLHTHKSDWDDLQDIVNLAHQYG-----LTVDAYIGHPD-------DLHTFGIPARTPE 189 Query: 158 ETLDWVQEVQKRGAGEI-VLNMMNQDGVRNG--YDL--EQLKKVREVCHVPLIASGGAGT 212 E + +Q G I ++ M+ +GV G + ++L+ + VP +A GG Sbjct: 190 EVASVAKRMQDIGVDMIGLMTGMSYEGVAAGDIPQMIKDRLRALVGAVDVPTLAEGGINL 249 Query: 213 MEHFLEAFRDADVDGALAASVF 234 +AF+D V+ + + Sbjct: 250 AN--AKAFKDTGVNILVVGTAI 269 >UniRef50_O19904 Uncharacterized protein ycf23 n=1 Tax=Cyanidium caldarium RepID=YCF23_CYACA Length = 249 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 30/259 (11%), Positives = 73/259 (28%), Gaps = 48/259 (18%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 LD+ + + +K + + ++ +A+ + D V V Sbjct: 9 LDIANKKAIKVISGLTNLNYEHVLTIARASQRACVSYIDIA----------ADPQLVKVV 58 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS-----------PALADPTLITRLAD 118 ++IP CV+G ++ + GAD I + + TL+ + Sbjct: 59 KANVNIPICVSG--LEIQPIYNAVLAGADLIEVGNYESLYKRNTVLSVCKIITLVEEIKK 116 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL-----DWVQEVQKRGAGE 173 + V I + + Q T+ ++ VQ++ + Sbjct: 117 LCPRVPLTVTIPYILNQKDQINLCKQLESLRVDYIQTEGNSISKCKNHCVQDLLRLSLQT 176 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + ++ + +P+I S G + + G Sbjct: 177 LACTY----------------ELVKHTQLPIICSSGLSDVT--VPLAFSLGASGIGIGKF 218 Query: 234 F--HKQIINIGELKAYLAT 250 + + I + + + Sbjct: 219 VTSYYEEEKIVSILSKIKK 237 >UniRef50_B0EC90 tRNA-dihydrouridine synthase, putative n=2 Tax=Entamoeba RepID=B0EC90_ENTDI Length = 340 Score = 46.8 bits (110), Expect = 6e-04, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 59/165 (35%), Gaps = 8/165 (4%) Query: 71 EVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + I V G + AK L D I IN L P I + +G + Sbjct: 77 KERPIIIQVVGSDANEMARTAKFLQSYCDAIDIN---LGCPQKIAQ-KGNYGAYLALDFD 132 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN---QDGVRN 186 T VN + R + +T+ +V+ +Q+ G I ++ + + Sbjct: 133 HTKEIVNAVIEAVNIPVYCKVRVFEDEDKTMKFVEMLQECGIWGIAVHGRTINEKQSMNY 192 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 + K++E +P+IA+G + E E + DG + Sbjct: 193 HARWNYIAKIKEQLKIPVIANGEMRSREKIEECKKVTHSDGYMIG 237 Score = 41.4 bits (96), Expect = 0.028, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 33/89 (37%), Gaps = 4/89 (4%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVV---DKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + E G + + T + + ++++++ E + IP G ++S E Sbjct: 164 KFVEMLQECGIWGIAVHGRTINEKQSMNYHARWNYIAKIKEQLKIPVIANGEMRSREKIE 223 Query: 91 KILS-FGADKISINSPALADPTLITRLAD 118 + +D I L +P + + D Sbjct: 224 ECKKVTHSDGYMIGFGLLMNPGMCEGIID 252 >UniRef50_B8GFK2 Methanogenesis marker protein 9 n=5 Tax=Methanomicrobiales RepID=B8GFK2_METPE Length = 372 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 8/95 (8%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE 71 ++ VV V+ R ++ D V LAKR + GAD L G S + ++ Sbjct: 153 LKSAGVVVSVKIRAGVVLDDRV-LAKRLWKAGADILHV---DLMDYG----YSKLRQIRN 204 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 + I S + + + GAD +S+ A Sbjct: 205 SCPLMLIANNSITSFDRMRDMFTHGADLVSLARQA 239 >UniRef50_C6A1J9 Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase n=7 Tax=Thermococcaceae RepID=C6A1J9_THESM Length = 406 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 59/165 (35%), Gaps = 7/165 (4%) Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI-VVGID 130 + P GI+++E + KI + + L +A R G + ++G+ Sbjct: 31 EVGTPLIKKEGIRAVELMKRRFPD--RKIVADLKTMDTGALEVEMAARHGADVVSILGVA 88 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL-NMMNQDGVRNGYD 189 + +Y + + + +E++ G I++ +++ Sbjct: 89 DDKTIKDAVTVAKKYGIRVMADLIGVKDKVKRAKELENMGVNYILVHTGIDEQAQGRNP- 147 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 LE L+KV + +P+ +GG +E + +A + Sbjct: 148 LEDLEKVVKAVKIPVAVAGGL-NLETIPKVI-EAGATIIIVGGAI 190 Score = 42.1 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 6/118 (5%) Query: 29 IGDIVPLAKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 + D V AK G + ++ + I + GR + + +V + + IP VAGG+ +LE Sbjct: 114 VKDKVKRAKELENMGVNYILVHTGIDEQAQGRNPLED-LEKVVKAVKIPVAVAGGL-NLE 171 Query: 88 DAAKILSFGADKISINSPAL--ADPTLI-TRLADRFGVQCIVVGIDTWYDAETGKYHV 142 K++ GA I + DP I R+ D F + + + D V Sbjct: 172 TIPKVIEAGATIIIVGGAITKAKDPENITRRILDLFWAEYMQTIVKVIQDITDHIKTV 229 >UniRef50_D1JFH0 Dihydroorotate dehydrogenase electron transfer subunit/dihydroorotate dehydrogenase n=1 Tax=uncultured archaeon RepID=D1JFH0_9ARCH Length = 589 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 34/115 (29%), Gaps = 24/115 (20%) Query: 29 IGDIVPLAKRYAEEGADELVFYD----------ITASSDGRVVDK-------------SW 65 +GD LA + GAD + + + G Sbjct: 452 VGDPAGLAMTLEKAGADAITAINTVIARPVDNRLDTHILGNPTGYGGKSGKDLTVGGKEI 511 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL-ADPTLITRLADR 119 V + + + IP GGI S +D GA + S + D + + + Sbjct: 512 VFNLYKELKIPIIAVGGIFSAKDVIDYAKNGASMFQVGSALVSEDLEIFSTIKKE 566 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 56/178 (31%), Gaps = 21/178 (11%) Query: 91 KILSFGADKISINSPALAD-PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 +L F A + A+ + P L+ + I G G Sbjct: 405 DMLEFNASCPHSDFVAVENQPKLLRSIIKEIRAIVHPKPIAVKISPNVGDPA-----GLA 459 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR----NGYDL-----EQLKKVREVC 200 + + + V R + + + +G DL E + + + Sbjct: 460 MTLEKAGADAITAINTVIARPVDNRLDTHILGNPTGYGGKSGKDLTVGGKEIVFNLYKEL 519 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI-----GELKAYLATQGV 253 +P+IA GG + + ++ ++ S + + I ELKAYL +G Sbjct: 520 KIPIIAVGGIFSAKDVIDYAKN-GASMFQVGSALVSEDLEIFSTIKKELKAYLGAKGY 576 >UniRef50_Q1CZH5 Indole-3-glycerol phosphate synthase n=2 Tax=Cystobacterineae RepID=Q1CZH5_MYXXD Length = 262 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 66/208 (31%), Gaps = 34/208 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D+V +A+ Y GA + +T D + V V + +P + + + Sbjct: 68 DVVAVARAYEAAGASAISV--LTDGPDFGGSLEDLV-AVRAAVSLPVLRKDFLVAAREVE 124 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + +GAD + + + AL D L + + ++ +A Sbjct: 125 ESAQWGADAVLLIADALEDGEL-REMVATAKAVGVAALVEAHTEA--------------- 168 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMM--NQDGVRNGYDLEQLKKVREVCHVPLIASG 208 + GA + +N G L + +R V L+A Sbjct: 169 -----------HAERALAAGAKLVGINNRNLATLKTDTGTALRVMPNLRSRARV-LVAES 216 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHK 236 G ++ + A ++A D L + Sbjct: 217 GLKSLADLVAA-QEAGADAVLVGESLLR 243 >UniRef50_A8ESR6 FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ESR6_ARCB4 Length = 358 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 67/216 (31%), Gaps = 35/216 (16%) Query: 60 VVDKSWVSRVAE--------VIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALADP 110 V+ + +V + ID P GI+++E L G I+I +P Sbjct: 144 NVNLELIKKVEQLGYEALVITIDAPIS---GIRNVEQRMGFFLPDGISAINIKNP-FQTT 199 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + D I+ + ++ + ++ G Sbjct: 200 DNFENIFDIVEYLPTWKDIEYLKKNTKLPVILKG------------ITSVSYAKKALDLG 247 Query: 171 AGEIVLNMMNQDGVRNGYD-LEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDG 227 IV++ + +E L K+ +V + +P++ GG L+A + Sbjct: 248 IDGIVVSNHGGRTLDTLPASIELLPKIAKVINKKIPILFDGGIRRGTDVLKAI-ALGANA 306 Query: 228 ALAAS-VFHK----QIINIGELKAYLATQGVEIRIC 258 L + + + + L + +E+ + Sbjct: 307 VLIGRPIIYGLATAGALGVAHTLKILKEE-LEVSMI 341 Score = 42.1 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Query: 33 VPLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLEDA 89 V AK+ + G D +V + + D + ++A+VI+ IP GGI+ D Sbjct: 237 VSYAKKALDLGIDGIVVSNHGGRTLDTLPASIELLPKIAKVINKKIPILFDGGIRRGTDV 296 Query: 90 AKILSFGADKISINSPALA 108 K ++ GA+ + I P + Sbjct: 297 LKAIALGANAVLIGRPIIY 315 >UniRef50_Q02YU5 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=30 Tax=Firmicutes RepID=NANE_LACLS Length = 234 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 28/248 (11%), Positives = 76/248 (30%), Gaps = 68/248 (27%) Query: 12 VRDGQVV--KGVQFRNHEIIGD----IVPLAKRYAEEGADELVFYDITASSDGRVVDKSW 65 ++ G +V + + + + +AK + GA + R Sbjct: 10 IKGGIIVSCQALPGEPL-YSENGGVMPL-MAKAAEQAGAVAI-----------RANSVRD 56 Query: 66 VSRVAEVIDIPFCVAGGI-------------KSLEDAAKILSFGADKISINSPALADPT- 111 + + + + +P GI ++++ ++++ + I+++ Sbjct: 57 IKEIQKAVSLPII---GIIKKDYLPQKSFITATMKEIDELVATSCEVIALDCTLRERHDG 113 Query: 112 -----LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 I ++ +++ Q ++ + + E + G Sbjct: 114 LTINQFIKKIKEKYPTQLLMADCSNFKECENAYSAGVDFVGTTLSG-------------- 159 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 ++ + D E L+K+ E +P+IA G + E + + VD Sbjct: 160 ---------YTEESKKQ--DEPDFELLEKLVEA-KIPVIAEGRIHSPEQA-QYVQKIGVD 206 Query: 227 GALAASVF 234 G + Sbjct: 207 GMVIGGAI 214 >UniRef50_C5EVU6 NADH:flavin oxidoreductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVU6_9FIRM Length = 625 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 70/203 (34%), Gaps = 20/203 (9%) Query: 34 PLAKRYAEEGADELVFY--------DITASSDGRVV-DKSWVSRVAEVIDIPFCVAGGIK 84 +A+ GAD + I+A+ D + + + + + IP I Sbjct: 218 EIARILEAAGADAIHVSIGMPESGGYISATMDVEDCFNVENAAVIKKYVSIPVIAVNRIV 277 Query: 85 SLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 ++DA +++ G AD +S+ LADP L+ + + + I + K Sbjct: 278 DIKDAVEVVEQGKADMVSMARAQLADPELVNKYL-GINDEPVYRCIGCNQGCKDKKARKK 336 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE---QLKKVREVC 200 E + +V ++ +I++ G+ +L + ++ E Sbjct: 337 ITCMQNPLLGR--EELIHFVPATKEEQQEKILIAGAGPAGLELACNLARRGLVPEIYEKD 394 Query: 201 HVPLIASGGAGTMEHFLEAFRDA 223 +P GG + ++ Sbjct: 395 QIP----GGLVNLSALAPCKKNM 413 >UniRef50_A3Q0B7 Ribulose-phosphate 3-epimerase n=3 Tax=Mycobacterium RepID=A3Q0B7_MYCSJ Length = 216 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 52/180 (28%), Gaps = 20/180 (11%) Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL-----ITRLADR 119 V +AE +P G++ LE+ A + G D I SPA D L Sbjct: 45 HVDMMAEGEGLP--AGVGLRELEEIACAVPSGFDVHLIGSPAFVDAALPRVLTYAPAKVF 102 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 A G V + ++ + +++ ++ Sbjct: 103 LPWAAFSEERSAAIRAAGGSAWVALWQEWDALSEPEPRWPAA---------PDGVLVMLI 153 Query: 180 NQDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 G R+ +E+L V +P+I GG E A + + Sbjct: 154 E-PGTRDRCRVERLAIVAACAAGLPVIVDGGVT--EDVAPLCVTAGAEAMVVGRALLAGT 210 >UniRef50_B0TE53 Biotin synthase n=2 Tax=Clostridia RepID=BIOB_HELMI Length = 326 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 69/252 (27%), Gaps = 23/252 (9%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY--DITASSDGRVVDKSWVSRVAEVID 74 VK + IV A+ EGA S + R+ Sbjct: 82 CVKTY---DLLDPDAIVGRARVMEAEGAHRFSLVTSGRGMSDAELEPVLAIYERLRRETK 138 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + C + GI + ++ G N A ++ + I Sbjct: 139 LSLCASLGILNEAQLRRLAEAGVTMYHHNLEASRR--FFPQICTTHSYDERIATI--RAA 194 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI---VLNMMNQDGVRNGYDLE 191 G + T + +D E+++ G + +LN + + + Sbjct: 195 QAAGMVVCSGGIFSMG---ETIDDRIDMAFELRELGIRSVPINILNPIAGTPLEGQPLIP 251 Query: 192 QLKKVREVCHVPLI--------ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 L+ ++ + LI A G G + A D AL S + E Sbjct: 252 PLEILKSIALYRLILPSARIRMAGGREGALRDLQSLPFIAGADAALVGSYLTTSGRTVAE 311 Query: 244 LKAYLATQGVEI 255 L G+ + Sbjct: 312 DIQMLRDLGLNV 323 >UniRef50_A1UF85 Pyridoxine biosynthesis protein n=3 Tax=Mycobacterium RepID=A1UF85_MYCSK Length = 322 Score = 46.8 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 67/231 (29%), Gaps = 19/231 (8%) Query: 34 PLAKRYAEEGADEL-----VFYDITASSDG--RVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 A+ GA + V DI + G R+ D + + + + IP I Sbjct: 57 EQARIAEGAGAVAVMALERVPADI-RAQGGVSRMSDPDMIEGIIDAVTIPVMAKARIGHF 115 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 +A + S G D + + + P T D++ V T + Sbjct: 116 VEAQILQSLGVDYV--DESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRITEGAAM 173 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-----YDLEQLKKVREVCH 201 T + + ++K G L +++D + + + +V Sbjct: 174 IRSKGEAGTG-DVSNATTHMRKIGGEIRRLTSLSEDELYVAAKELQAPYDLVAEVARAGK 232 Query: 202 VPLI--ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +P+ +GG T +G S K A + Sbjct: 233 LPVTLFTAGGIATPADA-AMMMQLGAEGVFVGSGIFKSGNPAERAAAIVKA 282 Score = 42.1 bits (98), Expect = 0.018, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 7/96 (7%) Query: 45 DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV--AGGIKSLEDAAKILSFGADKISI 102 DEL A+ + + V+ VA +P + AGGI + DAA ++ GA+ + + Sbjct: 208 DELYV----AAKELQAP-YDLVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFV 262 Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 S R A D G Sbjct: 263 GSGIFKSGNPAERAAAIVKATTFYDDPDVLAKVSRG 298 >UniRef50_D0J1P6 Dihydrouridine synthase, DuS n=7 Tax=cellular organisms RepID=D0J1P6_COMTE Length = 347 Score = 46.8 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 53/148 (35%), Gaps = 21/148 (14%) Query: 93 LSFGADKISINS-----PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 L+FG +N L DP I R VV G Sbjct: 94 LNFGCPAKVVNRHGGGASLLQDPEQIVR----------VVDAVRRAVPAQMPVSAKMRLG 143 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ-DGVRNGYDLEQLKKVREVCHVPLIA 206 R +T + Q +++ GA EIV++ + DG R E++ ++RE V ++A Sbjct: 144 FNDRALMT-----ECAQAMEQGGACEIVVHARTKLDGYRPPAYWEEIPRIREAVGVNVVA 198 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVF 234 +G T+E L + D + Sbjct: 199 NGEIWTVEEALRCREVSGCDDLMLGRGI 226 >UniRef50_C3RHP7 NADH:flavin oxidoreductase n=5 Tax=Bacteria RepID=C3RHP7_9MOLU Length = 646 Score = 46.8 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 18/130 (13%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-----------RV 60 + + V G + L + E G D + + + +S G Sbjct: 222 LSGNEYVHGGRTEAETY-----ELCTIFEELGFDGIHISNGSYASPGNRAVIAPMFTEHA 276 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL-AD 118 ++ ++V +++D+P V I + A +++ AD I + +L DP L + A+ Sbjct: 277 LNMEISAQVKKLVDLPVIVTNRINDPQMADTLINMDKADFIGMGRGSLTDPDLPNKAKAE 336 Query: 119 RFGVQCIVVG 128 ++G + +G Sbjct: 337 KYGNIKMCIG 346 >UniRef50_B1KDM8 Dihydroorotate dehydrogenase n=26 Tax=Gammaproteobacteria RepID=PYRD_SHEWM Length = 340 Score = 46.4 bits (109), Expect = 9e-04, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 6/88 (6%) Query: 39 YAEEGADELVFYDITASSDGRVVDK---SWVSRVAEVID--IPFCVAGGIKSLEDAAKIL 93 + +G L+ + T G+ ++ S + +++ ++ IP GGI S DA L Sbjct: 249 LSRDGVSGLMNANETGGLSGKPLNLLSTSVIKKLSSCLNGQIPIIGVGGINSAADAIDKL 308 Query: 94 SFGADKISINSPALAD-PTLITRLADRF 120 GA + I S + P LI + + Sbjct: 309 DAGASMVQIYSGFIYQGPKLIKDIIEAC 336 >UniRef50_Q2RTX4 Dihydrouridine synthase TIM-barrel protein yjbN n=3 Tax=Bacteria RepID=Q2RTX4_RHORT Length = 349 Score = 46.4 bits (109), Expect = 9e-04, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 57/176 (32%), Gaps = 34/176 (19%) Query: 89 AAKILSFGA--DKIS---INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 A L+ G D++S + +ADP L+ + +A + Sbjct: 100 AEINLNVGCPSDRVSSGRFGACLMADPALVAE------------CLSAMAEASNAPVTIK 147 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD---------LEQLK 194 G + Q + +V +V + G I+++ + + Sbjct: 148 HRIGIDDLDSYDQL--VGFVDQVARSGIATIIVHARKAWLKGLSPKENREIPPLRHDVVH 205 Query: 195 KV-REVCHVPLIASGGAGTMEHFLEAFRDAD-----VDGALAASVFHKQIINIGEL 244 ++ + + +I +GG T+ L+ D VDG + ++ + + Sbjct: 206 RLKADFPGLEVILNGGITTLTQALDHLGSGDPAAPAVDGVMIGRAAYETPYMLAQA 261 >UniRef50_A4RQU5 Predicted protein n=2 Tax=Ostreococcus RepID=A4RQU5_OSTLU Length = 608 Score = 46.4 bits (109), Expect = 9e-04, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 56/197 (28%), Gaps = 9/197 (4%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 G + + + R + GG + + D I ++ + I Sbjct: 285 LQGLPSEWALLRRHKSEDIFGVQICGGY--PDSVTRCCQLLEDTIDVDFIDINMGCPIDS 342 Query: 116 LADRFGVQCIVVG-----IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + + G +++ A + + +V + G Sbjct: 343 VCQK-GYGSMMLEKPKKMETVIRAASAALGKCSLTFKTRMAYTDKSRVAHTFAPKVAEWG 401 Query: 171 AGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 A + L+ + D E K +E VPLI +G + + + VD + Sbjct: 402 AAAMTLHGRTRAQRYRSVADWEYTKLTKESSSVPLIGNGDVYMQKDYYTHLEEHSVDTCM 461 Query: 230 AASVFHKQIINIGELKA 246 A + E+K Sbjct: 462 LARGALIKPWLFTEIKE 478 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 3/131 (2%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKI 92 A + AE GA + + T + R V D + E +P G + + + Sbjct: 393 FAPKVAEWGAAAMTLHGRTRAQRYRSVADWEYTKLTKESSSVPLIGNGDVYMQKDYYTHL 452 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 D + AL P L T + +R I + + + D Sbjct: 453 EEHSVDTCMLARGALIKPWLFTEIKER-RDWDISSRERFDILKSFASFGLEHWGSDTRGV 511 Query: 153 RVTQWETLDWV 163 T+ L+W+ Sbjct: 512 ESTRKYLLEWM 522 >UniRef50_B2I678 2-nitropropane dioxygenase NPD n=9 Tax=Bacteria RepID=B2I678_XYLF2 Length = 343 Score = 46.4 bits (109), Expect = 9e-04, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 11/101 (10%) Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD----------LEQLKKVREV 199 + Q + G +V+ + G YD + +++V V Sbjct: 146 GSRVLASVTLPAEAQAAMEAGVDGLVVQGPDAGGHSATYDPGRPFTPLKTVSLVRRVCAV 205 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +P+IA+GG + A A ++ + + Sbjct: 206 SSLPVIAAGGVDGPV-MVRALLQAGAAAVAIGTLLLRTKES 245 Score = 41.8 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 40/134 (29%), Gaps = 11/134 (8%) Query: 32 IVPLAKRYAEEGADELVFYDITASSD------GRV----VDKSWVSRVAEVIDIPFCVAG 81 A+ E G D LV A GR S V RV V +P AG Sbjct: 156 PAE-AQAAMEAGVDGLVVQGPDAGGHSATYDPGRPFTPLKTVSLVRRVCAVSSLPVIAAG 214 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 G+ +L GA ++I + L + + A TG+ Sbjct: 215 GVDGPVMVRALLQAGAAAVAIGTLLLRTKESGATQVHKDALANPAYTETVITHAFTGRPA 274 Query: 142 VNQYTGDESRTRVT 155 G +R + Sbjct: 275 RTLRNGFVNRYHAS 288 >UniRef50_C2KD02 Enoyl-[acyl-carrier-protein] reductase (NADH) n=3 Tax=Lactobacillus crispatus RepID=C2KD02_9LACO Length = 312 Score = 46.4 bits (109), Expect = 9e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL-KKVREVCHVPLIASGGAGTMEH 215 + +++++ GA +++ M G G L ++ + ++PLIA+GG G Sbjct: 116 IPNVKIAKKMEEMGADAVIVEGMEAGGHIGGTTSMVLWPQIADAINIPLIAAGGIGDGRG 175 Query: 216 FLEAFRDADVDGALAASVF 234 +EAF A +G ++F Sbjct: 176 VVEAFV-AGAEGVQCGTIF 193 >UniRef50_C7Q7H9 (S)-2-hydroxy-acid oxidase n=2 Tax=Actinomycetales RepID=C7Q7H9_CATAD Length = 678 Score = 46.4 bits (109), Expect = 9e-04, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 7/80 (8%) Query: 33 VPLAKRYAEEGADELVFYD-----ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 A+ GAD ++ + + + V+ VA P V GG++S Sbjct: 548 AEDARLAVSYGADAIIVSNHGGRQLDGAVPSLTALPEVVAAVAGAC--PVMVDGGVRSGG 605 Query: 88 DAAKILSFGADKISINSPAL 107 DA L+ GA + + P L Sbjct: 606 DAFAALALGAQAVFLGRPVL 625 >UniRef50_P59441 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=3 Tax=Firmicutes RepID=NANE_LACPL Length = 228 Score = 46.4 bits (109), Expect = 9e-04, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 52/195 (26%), Gaps = 31/195 (15%) Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + + + +D+P G K+ + I + C Sbjct: 54 IQAIQDEVDLPLI-----------------GLSKVDYPDSPVYITPTIKEMRAVAATGCA 96 Query: 126 VVGIDTWYDAE-TGKYHVNQYTGDESRTRVT----QWETLDWVQEVQKRGAGEIVLNMMN 180 VV D G+ + T +T++ V+ K G I M Sbjct: 97 VVACDVTGQPRPNGEKLAEIVATMRTEFPDTLLMADTDTIENVKVADKLGFDIIGTTMHG 156 Query: 181 QDGVRNGY-----DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 G D LK+V + P+IA G T E D + Sbjct: 157 YTPATTGANIADNDFAYLKEVLQATSRPVIAEGKVDTPEKMKRCL-DLGCHAVVVGGAI- 214 Query: 236 KQIINIGELKAYLAT 250 + + +++ Sbjct: 215 --TRPLEIAQRFISA 227 >UniRef50_Q03148 Pyridoxine biosynthesis protein SNZ1 n=262 Tax=cellular organisms RepID=SNZ1_YEAST Length = 297 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 67/242 (27%), Gaps = 30/242 (12%) Query: 12 VRDGQVVKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITAS--------SDGRVV 61 ++ G +I D+V AK + GA + + R+ Sbjct: 8 IKSGLAQMLKGG----VIMDVVTPEQAKIAEKSGACA--VMALESIPADMRKSGKVCRMS 61 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 D + + + IP I +A I + D I + D+F Sbjct: 62 DPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFK 121 Query: 122 VQCIVVGIDT-----WYDAETGKYHVNQYTGDESRTRVTQ--WETLDWVQEVQKRGAGEI 174 V + D + G + + + ++ Q+ + + Sbjct: 122 VPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSED- 180 Query: 175 VLNMMNQDGVRNGYDLEQLKKVREVCHVPLI--ASGGAGTMEHFLEAFRDADVDGALAAS 232 + + + LK V E +P++ A+GG T DG S Sbjct: 181 ---DIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADA-ALLMQLGCDGVFVGS 236 Query: 233 VF 234 Sbjct: 237 GI 238 >UniRef50_A4RSY3 Inosine 5'-phosphate dehydrogenase n=6 Tax=Eukaryota RepID=A4RSY3_OSTLU Length = 502 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 27/160 (16%) Query: 82 GIKSLEDAAK--ILSFGADKISINSP---ALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + + + G D I ++S ++ +I L + ++ G + Sbjct: 241 GTRDADRVRAKYLADAGVDAIILDSSQGDSIYQLEMIKYLKNELPHVDVIAGNVVTQNQA 300 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK-- 194 V + + V G K Sbjct: 301 RRLLEVGADGLRVGMGSGS-------------------ICTTQEVCAVGRGQATAVYKVG 341 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 ++ + +VP+IA GG H ++A A+ S+F Sbjct: 342 QIAKEFNVPIIADGGIQNSGHIVKAL-ALGASVAMCGSMF 380 Score = 41.8 bits (97), Expect = 0.021, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 23/107 (21%) Query: 8 PCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD--------GR 59 P +DV G VV Q A+R E GAD L + S GR Sbjct: 285 PHVDVIAGNVVTQNQ-------------ARRLLEVGADGLRVGMGSGSICTTQEVCAVGR 331 Query: 60 VVDKSW--VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 + V ++A+ ++P GGI++ K L+ GA S Sbjct: 332 GQATAVYKVGQIAKEFNVPIIADGGIQNSGHIVKALALGASVAMCGS 378 >UniRef50_Q6BVL8 DEHA2C01584p n=4 Tax=Dikarya RepID=Q6BVL8_DEBHA Length = 378 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 7/79 (8%) Query: 34 PLAKRYAEEGADELVFYD-----ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 A+ GAD ++ + + + V+ V IP + GGI+ D Sbjct: 240 EDAEMAVNAGADGIIVSNHGGRQLDGALSTLDALPDVVAAV--NGRIPVHIDGGIRRGSD 297 Query: 89 AAKILSFGADKISINSPAL 107 K L+ GAD + A+ Sbjct: 298 IFKALALGADHCWVGRVAV 316 >UniRef50_A9A3M4 Dihydroorotate dehydrogenase family protein n=2 Tax=Thaumarchaeota RepID=A9A3M4_NITMS Length = 303 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 70/232 (30%), Gaps = 41/232 (17%) Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVA--GGIKSLEDAAKI-------------LSFG 96 I A +++ + D+P V+ G I ED K+ L+ Sbjct: 70 INAVGLSNPGAENFAKMIEPNQDVPIIVSLVGSI--PEDFEKMIKQFENCKVTAYELNLS 127 Query: 97 ADKIS-INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 ++ + DP L+ ++ V A+ G Y + Sbjct: 128 CPHVAKVGLEVGDDPELVKKIVTTVKNSTNV-----PVIAKVG-LGTTHYLNTVGTAIES 181 Query: 156 QWETLDWVQEVQKRGAGEIVLNMM----NQDGVRNGYDLEQLK-----KVREVCHVPLIA 206 + + + V+ V N+ G +G ++ + ++ +P+I Sbjct: 182 GIDAITAINTVRSMAID--VETQRPILSNKFGGLSGTPIKPIALRCVYEISSKYDIPIIG 239 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI-----GELKAYLATQGV 253 GG T E +E F A S I++ + Y+ + Sbjct: 240 CGGISTWEDAVEFF-LAGASSVQLGSAIGDNWIDVFNEINTGILQYMEKKNY 290 >UniRef50_D1B5R0 Dihydrouridine synthase DuS n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5R0_THEAS Length = 318 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 3/89 (3%) Query: 38 RYAEEGADELVFYDITASS--DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 R E G D L+ + T+ +GR + + ++ +G + S +DA + L Sbjct: 162 RLFEAGLDLLLLHGRTSPQRYEGRADVEQVIR-LSRAFPGRVVGSGDVFSPDDALRYLEG 220 Query: 96 GADKISINSPALADPTLITRLADRFGVQC 124 G + + + DP L R A R G++ Sbjct: 221 GCVAVLLARGFVRDPLLALRCARRLGLRP 249 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 2/79 (2%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEH 215 ETL + + + G ++L+ G D+EQ+ ++ ++ SG + + Sbjct: 154 EETLRFCGRLFEAGLDLLLLHGRTSPQRYEGRADVEQVIRLSRAFPGRVVGSGDVFSPDD 213 Query: 216 FLEAFRDADVDGALAASVF 234 L + L A F Sbjct: 214 ALRYL-EGGCVAVLLARGF 231 >UniRef50_Q8U472 Hexulose-6-phosphate synthase (D-arabino 3-hexulose 6-phosphate formaldehyde lyase) n=2 Tax=Pyrococcus RepID=Q8U472_PYRFU Length = 434 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 60/165 (36%), Gaps = 7/165 (4%) Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI-VVGID 130 + P G++++E + KI + + L +A R G + ++G+ Sbjct: 79 EVGTPLIKKEGMRAVELMKRRFPD--RKIVADLKTMDTGALEVEMAARHGADVVSILGVA 136 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL-NMMNQDGVRNGYD 189 + +Y + + + +E+++ G I++ +++ Sbjct: 137 DDKTIKDALAVARKYGIKVMVDLIGVKDKVKRAKELEEMGVHYILVHTGIDEQAQGKSP- 195 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 LE L+KV + +P+ +GG +E + + + S Sbjct: 196 LEDLEKVVKAVKIPVAVAGGL-NLETIPKVI-ELGATIIVVGSAI 238 Score = 42.5 bits (99), Expect = 0.012, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 6/101 (5%) Query: 29 IGDIVPLAKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 + D V AK E G ++ + I + G+ + + +V + + IP VAGG+ +LE Sbjct: 162 VKDKVKRAKELEEMGVHYILVHTGIDEQAQGKSPLED-LEKVVKAVKIPVAVAGGL-NLE 219 Query: 88 DAAKILSFGADKISINSPAL--ADPTLI-TRLADRFGVQCI 125 K++ GA I + S DP + ++ D F + + Sbjct: 220 TIPKVIELGATIIVVGSAITKAKDPEEVTRKIIDLFWDEYM 260 >UniRef50_Q88LF2 tRNA-dihydrouridine synthase C n=38 Tax=cellular organisms RepID=DUSC_PSEPK Length = 323 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 2/89 (2%) Query: 33 VPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + A AE G+ LV + T WV+RV +V+ +P G I +++D + Sbjct: 151 LECATALAEGGSAHLVVHARTKVEGYKPPAHWEWVARVQDVVKVPVFANGEIWTVDDWRR 210 Query: 92 ILS-FGADKISINSPALADPTLITRLADR 119 GA+ I + ++ P L ++A Sbjct: 211 CREVSGAEDIMLGRGLVSRPDLGLQIAAA 239 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 57/171 (33%), Gaps = 4/171 (2%) Query: 67 SRVAEVIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 +R A + + + G + E+AA GA I +N A +R + Sbjct: 57 ARTAAGVPMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEP 116 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 ++ ++ + L+ + + G+ +V++ + Sbjct: 117 ELLHAIVREVRRAVPANIPVTSKMRLGFDSPD-GALECATALAEGGSAHLVVHARTKVEG 175 Query: 185 RNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 E + +V++V VP+ A+G T++ + + + + Sbjct: 176 YKPPAHWEWVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGL 226 >UniRef50_C2D6B3 Dihydroorotate oxidase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6B3_9ACTN Length = 309 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 21/110 (19%) Query: 31 DIVPLAKRYAEEGADELVFYD---------------ITASSDG------RVVDKSWVSRV 69 +I +A+ EGAD L + ++ + G + V Sbjct: 178 NIPEIARALESEGADALSLINSIPGMAIDTTTYKSKLSRPTGGFSGPAIHPIAVRMVWEA 237 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + + IP C GGI + +AA+ + GA +S+ L DP R+ Sbjct: 238 HKAVKIPLCGIGGITTGLEAAEFILAGATAVSVGLANLYDPMSAPRILHE 287 >UniRef50_A7AWB5 Dihydrouridine synthase (Dus) domain containing protein n=1 Tax=Babesia bovis RepID=A7AWB5_BABBO Length = 362 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 40/112 (35%), Gaps = 17/112 (15%) Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY---------- 188 V G + + D++ V +G + +++ + NG Sbjct: 144 PVTVKHRLGVD--HNDSYEFVRDFISTVADQGCTDFIVH--ARKAWLNGINPRKNRSIPP 199 Query: 189 -DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 D E++ ++ E ++ + +GG ++E A V G + + ++ Sbjct: 200 LDHERVYRLCQEFPNLNISINGGIKSLEEIKYALSR-GVYGVMVGRMAYENP 250 Score = 42.1 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 16/159 (10%) Query: 18 VKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVS 67 VK +H + V A++G + + + A +G +D V Sbjct: 147 VKHRLGVDHNDSYEFVRDFISTVADQGCTDFIVHARKAWLNGINPRKNRSIPPLDHERVY 206 Query: 68 RVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL-ADRFGVQCI 125 R+ + ++ + GGIKSLE+ LS G + + A +P + R+ D +G Sbjct: 207 RLCQEFPNLNISINGGIKSLEEIKYALSRGVYGVMVGRMAYENPCGLVRVDTDIYGEATN 266 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 T D +R + V+ Sbjct: 267 PATCKTRRIL----LETYANFIDSQASRTSDMNVCMLVK 301 >UniRef50_Q2W414 Dioxygenase related to 2-nitropropane dioxygenase n=4 Tax=Proteobacteria RepID=Q2W414_MAGSA Length = 351 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEV------IDIPFCVAGGIKSL 86 V A + EG D + + G V + + + IP V GGI + Sbjct: 154 VKYALKAEAEGVDAVAVV---GAECGGHPGMDMVGTMVQANVAAAKLSIPLLVGGGIGTG 210 Query: 87 EDAAKILSFGADKISINSPALADPTLITRL 116 L+ GAD + + + L + Sbjct: 211 AHLVAALALGADGVVVGTRFLVAEEIWAHA 240 >UniRef50_C2BGB2 NADH:flavin oxidoreductase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BGB2_9FIRM Length = 639 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 14/211 (6%) Query: 33 VPLAKRYAEEGADELVF-YDITASSD--------GRVVDKSWVSRVAEVIDIPFCVAGGI 83 + +A Y + GAD L ++ ++ + + + IP G I Sbjct: 236 IKVAIAYEKAGADALDISQGCNSAMAISTPPYFLKTAFNEDNCREIKKHVSIPVICPGRI 295 Query: 84 KSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQC--IVVGIDTWYDAETGKY 140 S E A +++S G AD + + LADP + + + + V + Sbjct: 296 ISPEIAEEVISSGAADFVDVGRAQLADPDFVKKAEEGRADEITLCVGCTQACFSRIMKGD 355 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC 200 + + E +++ G G ++ G+ + +K R + Sbjct: 356 VSCIFNPQTGHEIDRKIEATTNPKKILVIG-GGPAGLEASRVAALRGHKVILFEKTRRL- 413 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 I +G A +A V A A Sbjct: 414 GGQYILAGAAPHKSILADAVSQMGVKAASAG 444 >UniRef50_Q97FE2 NADH:flavin oxidoreductase n=1 Tax=Clostridium acetobutylicum RepID=Q97FE2_CLOAB Length = 395 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 27/57 (47%) Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + + + IP V GGI+ D I++ D +S++ P + P+++ + Sbjct: 309 NLNNAREIKNKVTIPVIVVGGIRKFSDIEDIIAKDCDFVSMSRPFIIQPSIVKTFKE 365 >UniRef50_D2LUG6 2,4-dienoyl-CoA reductase (NADPH) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LUG6_BACS4 Length = 649 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 30/130 (23%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIV---PLAKRYAEEGADELVFYDITASSDGRVVDK 63 P + V+ E D+ +++ + G D + AS+ + Sbjct: 217 YPVI-------VRLSVDEFDEDGIDVALSKNISRYLEKIGVDAIH-----ASAGNYNSME 264 Query: 64 SWVS--------------RVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALA 108 + + + ++IP G I+ + IL+ G AD ++I +A Sbjct: 265 KVIESPLYEQGWRVYLAEEIKKEVNIPVITVGSIREPKYVESILAEGKADFVAIGRGHIA 324 Query: 109 DPTLITRLAD 118 DP + + Sbjct: 325 DPEWTKKTLE 334 >UniRef50_UPI0001C36786 dihydroorotate dehydrogenase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36786 Length = 307 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 24/52 (46%) Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R A +DIP GGI ED + + GA + + S L+ P + RL Sbjct: 232 RRAATAVDIPVIGIGGISCAEDVIEYIMAGAYAVQVGSANLSRPDFMHRLLK 283 Score = 40.6 bits (94), Expect = 0.049, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 13/42 (30%), Gaps = 1/42 (2%) Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++ +P+I GG E +E A S Sbjct: 230 MCRRAATAVDIPVIGIGGISCAEDVIEYI-MAGAYAVQVGSA 270 >UniRef50_A6LJ97 Dihydroorotate dehydrogenase family protein n=2 Tax=Thermosipho RepID=A6LJ97_THEM4 Length = 360 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 62/212 (29%), Gaps = 46/212 (21%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + ++ + P V+ G ++ED ++ + AD F + Sbjct: 82 EILPKLKNELKKPLIVSVGY-TIEDMEILIPQ-----------------LNEYADAFEIS 123 Query: 124 CIVVGIDTWYDAETGK-YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN----- 177 VG D A K N + + +++ + + + GA IV Sbjct: 124 THYVGKDYNTIANIVKAIRKNTNKPIFMKLSPHIPDPVEFTKTILENGANGIVAINSWGP 183 Query: 178 ----MMNQDGVRNG---------------YDLEQLKKVREV-CHVPLIASGGAGTMEHFL 217 + G L +K +R+ + +I GG + E + Sbjct: 184 TMKIDIKNRKTLIGNEKGQVWLSGPVIKPIALSIVKTIRDAFPDITIIGVGGIKSAEDVI 243 Query: 218 EAFRDADVDGA-LAASVFHKQIINIGELKAYL 248 E + D L +S ++ L Sbjct: 244 EFL-LSGADAVQLLSSALIFGKDIYEKILNQL 274 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 26/119 (21%) Query: 31 DIVPLAKRYAEEGADELVFYD---------------ITASSDG---------RVVDKSWV 66 D V K E GA+ +V + + + G + + S V Sbjct: 159 DPVEFTKTILENGANGIVAINSWGPTMKIDIKNRKTLIGNEKGQVWLSGPVIKPIALSIV 218 Query: 67 SRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKI-SINSPALADPTLITRLADRFGVQ 123 + + DI GGIKS ED + L GAD + ++S + + ++ ++ Sbjct: 219 KTIRDAFPDITIIGVGGIKSAEDVIEFLLSGADAVQLLSSALIFGKDIYEKILNQLPST 277 >UniRef50_C6A1L2 Dihydroorotate dehydrogenase family protein n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A1L2_THESM Length = 309 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 21/112 (18%) Query: 28 IIGDIVPLAKRYAEEGADELVF--------YDI----------TASSDG---RVVDKSWV 66 + DIV +AK + GAD L D+ T G + + + V Sbjct: 169 DVTDIVEIAKTAVDAGADGLTIGNGAQAMRIDVETGLPILKLKTGGLGGPAVKPITLAKV 228 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + E +D+P GGI + +DA + GA + + + + DP R+ + Sbjct: 229 FKTREALDVPIIGIGGIMNWQDAIEYAMAGASLLGLGTAVMVDPEAPVRIIE 280 >UniRef50_O29870 Acetyl-CoA decarbonylase/synthase complex subunit delta n=12 Tax=Archaea RepID=ACDD_ARCFU Length = 452 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 12/129 (9%) Query: 9 CLDVRDGQ--VVKGVQFRNHEIIGDIVPLAKRYAEE-GAD--ELVFYDITASSDGRVVDK 63 +DV D + + K V+ +++ + A++ ++ GAD L D + Sbjct: 169 AIDVFDRRPMLAKAVRMHYEDVLDNPAEWARKCVKKFGADLVTLHLISTDPLLDDTPASE 228 Query: 64 --SWVSRVAEVIDIPFCVAGG---IKSLEDAAKILS-FGADKISINSPAL-ADPTLITRL 116 + V + + P V G K E K ++I + S L D I Sbjct: 229 AVKVLEDVLQAVKCPIIVGGSGNKEKDPEVLEKAAEVAEGERIMLASATLDMDWERIANA 288 Query: 117 ADRFGVQCI 125 A ++G + Sbjct: 289 AKKYGHVVL 297 >UniRef50_A8ICF9 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8ICF9_CHLRE Length = 198 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 5/104 (4%) Query: 18 VKGVQFRNHEIIGDIVP-LAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDI 75 VK N + I +V + GA + + TA + D + V VA + Sbjct: 46 VKIRLGENDKKI--VVDTVVDYLHRAGAAAVTVHGRTAEQRYKKAADWAKVGEVARSTPV 103 Query: 76 PFCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLAD 118 P G I + E A+ G + AL P + + Sbjct: 104 PIIGNGDILTHYEAHARRTESGCTAVMAGRGALIKPWIFQEYKE 147 Score = 42.9 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 29/102 (28%), Gaps = 1/102 (0%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPL 204 + V + + GA + ++ + D ++ +V VP+ Sbjct: 46 VKIRLGENDKKIVVDTVVDYLHRAGAAAVTVHGRTAEQRYKKAADWAKVGEVARSTPVPI 105 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 I +G T ++ +A + E K Sbjct: 106 IGNGDILTHYEAHARRTESGCTAVMAGRGALIKPWIFQEYKE 147 >UniRef50_A9V413 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V413_MONBE Length = 487 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 7/87 (8%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----DLEQLKKVREVCHVPLIASGG 209 T ETL+ V +Q G + ++ + E ++ V + C +P+I +GG Sbjct: 155 PTLEETLNLVNIIQDAGVAALGIHGRVPNQRPREPITDYQYEAIRAVAKACRIPVICNGG 214 Query: 210 ---AGTMEHFLEAFRDADVDGALAASV 233 + + L + A Sbjct: 215 SLDMDSYDDILAFRDKCGCSSVMVARA 241 Score = 41.4 bits (96), Expect = 0.027, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 38/122 (31%), Gaps = 12/122 (9%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVV----DKSWVSRVAEVIDIPFCVAGGIKSLED 88 + L + G L + + R + VA+ IP GG ++ Sbjct: 161 LNLVNIIQDAGVAALGIHGRVPNQRPREPITDYQYEAIRAVAKACRIPVICNGGSLDMDS 220 Query: 89 AAKIL----SFGADKISINSPALADPTLIT----RLADRFGVQCIVVGIDTWYDAETGKY 140 IL G + + A + ++ + + I + +D + KY Sbjct: 221 YDDILAFRDKCGCSSVMVARAAQYNMSIFSPQGLKTQQEVVKDYIKIAVDYNIVLDNMKY 280 Query: 141 HV 142 +V Sbjct: 281 NV 282 >UniRef50_Q8TXQ6 tRNA-dihydrouridine synthase n=1 Tax=Methanopyrus kandleri RepID=Q8TXQ6_METKA Length = 244 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 29/87 (33%), Gaps = 3/87 (3%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + + D L A G + R A + +P +++ ED ++ Sbjct: 146 DALEALRDSSVDVLHV---DAMKPGEPTYELEYVRAAARVGVPVIGNNSVRTPEDVDRMF 202 Query: 94 SFGADKISINSPALADPTLITRLADRF 120 GA +S+ P L + R+ Sbjct: 203 EAGASAVSVGRPILEGDWDVLERLVRY 229 Score = 40.6 bits (94), Expect = 0.054, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 51/175 (29%), Gaps = 16/175 (9%) Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISI--NSPALADPTLITRLADRFGVQCIVVGID 130 ++IP V +A ++ AD + + + P ++ A + D Sbjct: 62 VEIPVAVNVRFADPREAGELSGELADLVDVVEINAHCRQPEIVRAGAGE------ALLED 115 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YD 189 E + + R D ++ ++ + + D ++ G Sbjct: 116 RTRLIEIVEAVAEHDVYVSVKLRGPHPAFEDALEALRDSSVDVL-----HVDAMKPGEPT 170 Query: 190 LEQ-LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 E + VP+I + T E F +A + ++ E Sbjct: 171 YELEYVRAAARVGVPVIGNNSVRTPEDVDRMF-EAGASAVSVGRPILEGDWDVLE 224 >UniRef50_B0VIM3 Dihydroorotate dehydrogenase, catalytic subunit (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIM3_9BACT Length = 305 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 23/133 (17%) Query: 29 IGDIVPLAKRYAEEGADELVFYD---------ITA------------SSDGRVVDKSWVS 67 + DI +AK E GA + + + + + Sbjct: 173 VTDIAVIAKAAEEGGATAISLINTIWGMAIDYRNGKSRIKKGIGGYSGIGIKPLALALTY 232 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 R A+ + IP GGI + +DA + GA I++ + DP + ++ + G+ + Sbjct: 233 RAAQAVKIPVIAMGGIYNWQDALEFFWAGASMIALGTANFIDPLAVDKVYE--GLSSFCL 290 Query: 128 GIDTWYDAETGKY 140 GK Sbjct: 291 EKQLKLKDIVGKV 303 >UniRef50_C7GCF3 Regulatory protein TENI n=8 Tax=Clostridiales RepID=C7GCF3_9FIRM Length = 214 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 60/162 (37%), Gaps = 15/162 (9%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+ A+ + ++ + + RL ++ + + E + + Sbjct: 52 YEEMARQVLAICEEYGVICILHSYIETAKRLERQYVHLPLPLLRTCMQKTENEEKQIKFM 111 Query: 146 TGDESRTRVTQWET--------LDWVQEVQKRGA-----GEIVLNMMNQDGVRNGYDLEQ 192 +G+ S + + + ++ E +K GA G I + G +E Sbjct: 112 SGNLSMDQKNKNKLILGCSVHSVEDAIEAEKLGASYLTAGHIFATDCKRGLPPRG--MEF 169 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 LK+V E ++P+ A GG G + +++ + GA S F Sbjct: 170 LKQVCETVNIPVYAIGGIGLNDGKIDSVCECGAAGACIMSAF 211 >UniRef50_B6HPE4 Pc22g00300 protein n=3 Tax=Leotiomyceta RepID=B6HPE4_PENCW Length = 394 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 55/201 (27%), Gaps = 32/201 (15%) Query: 47 LVF-YDITASSDGRVVDKSWVSRVAEVI--DIPFCVAG---GIKSLE---DAAKILSFGA 97 L D T + + RV + V G ++ + A + L G Sbjct: 147 LYVPVDRTRAKS-------LIRRVKTAGYQSLWVTVDTSTLGKRTADRYLQARENLDAGV 199 Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 D A FG + + +D E + +++ G Sbjct: 200 A------ENARDIHSENDFAPAFGGRQVPGSVDGGLTWEDLDWISSEWGGPMVLK---GI 250 Query: 158 ETLDWVQEVQKRGAGEIVLNM-----MNQDGVRNGYDLEQLKKVREVCH-VPLIASGGAG 211 ++++ V+ + G I+L+ ++ LE E + + GG Sbjct: 251 QSVEDVKLAVQHGVQGILLSNHGGRQIHSAPSSLMTLLEIRTYYPEAFDKLQVFVDGGLR 310 Query: 212 TMEHFLEAFRDADVDGALAAS 232 L+A Sbjct: 311 DGADVLKAL-CLGATAVGVGR 330 >UniRef50_C2CV35 Possible isopentenyl pyrophosphate isomerase n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CV35_GARVA Length = 829 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 54/211 (25%), Gaps = 49/211 (23%) Query: 44 ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV---AGGIKSLEDAAKILSFGADKI 100 A ELV + + + + + + +P V G S D ++ + G + Sbjct: 624 AQELVMSEGDRDFSAWLNNIETIVSALDSMKVPVVVKETGCG-MSAHDVLRLKNVGVRAV 682 Query: 101 SINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL 160 + G V + ++ Y +S T L Sbjct: 683 DVGGR---------------GGTNFVAIENARRGRKS------DYEFLDSWGLTTVESLL 721 Query: 161 DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 D Q EI+ + + + ASGG T + + Sbjct: 722 DIAQ------CDEILCEPRDSSDS------------CNSARMQVFASGGVRTPLDVVRSL 763 Query: 221 RDADVDGA-LAASVFH----KQIINIGELKA 246 R +A H + + E Sbjct: 764 R-LGASAVGVAGEFLHTLINEGEDALVEQIE 793 >UniRef50_A3DN81 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Staphylothermus marinus F1 RepID=GGGPS_STAMF Length = 245 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 2/77 (2%) Query: 43 GADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI 102 G + + S + V + ++ V GGI+S A ++ S GAD I Sbjct: 167 GIKYIYLEAGSGSPKPVPPSFPAI--VKKYTNLITIVGGGIRSPFIAKELASSGADIIVT 224 Query: 103 NSPALADPTLITRLADR 119 + DP +++ Sbjct: 225 GTIVEEDPDKASKIISA 241 >UniRef50_B0CNE7 Predicted protein n=3 Tax=Agaricales RepID=B0CNE7_LACBS Length = 308 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 10/102 (9%) Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVRE 198 + + R +Q +TL V+ + G + ++ ++ D ++++RE Sbjct: 164 EMPPEITVTAKIRLLPSQEDTLKLVERIVNTGISALTVHCRTRNMREK--DRAVIERLRE 221 Query: 199 VC--------HVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + + +I +G + E + A Sbjct: 222 IVEFVEGLGRGIAVIENGDCMSWEDAKRVRETTGAHSVMIAR 263 >UniRef50_A2R578 Contig An15c0120, complete genome n=29 Tax=Leotiomyceta RepID=A2R578_ASPNC Length = 340 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 30/213 (14%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVDKSWVS---------RVAEVIDIPFCVAG--GIK 84 A+ E G + ++ + D +++ + V IP V G G Sbjct: 71 ARLIEEAGFPMIFISGFAVAASHGLPDTGYIAMGEMSARIQEIVRVTSIPIMVDGDTGYG 130 Query: 85 SLEDAAKILS----FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 S + + + GA + I T+ + DA Sbjct: 131 SPMNVRRTVECFAAAGAAGVMIEDQTWPKRCGHTKGKSVVSRGEAYARVQAAVDARNQGR 190 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC 200 + +S E + +E ++ GA + + D E ++K E Sbjct: 191 DIFILARTDSLIHGWD-EAMTRAKEFKRIGADGVFV--------EALPDREAMRKCAEEL 241 Query: 201 HVPLIAS---GGAGTMEHF-LEAFRDADVDGAL 229 +PL+A+ GG E+ + + Sbjct: 242 DIPLLANIIEGG--KSENLSAKELAELGFAAVA 272 >UniRef50_A8PLS2 tRNA-dihydrouridine synthase A n=1 Tax=Rickettsiella grylli RepID=A8PLS2_9COXI Length = 330 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 60/191 (31%), Gaps = 22/191 (11%) Query: 77 FCVAGGIKSL--EDAAKILSFGADKISI----NSPALADPTLITRLADRFGVQCIVVGID 130 + GGI S + A + S+G +I++ S + L + I Sbjct: 69 IQLGGGIASDLSKAAKIVESYGYSEINLNVGCPSEKVQSGGFGVVLLKE--PNRVADAIA 126 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-- 188 V G ++ + ++++V G +++ Sbjct: 127 AMKAVVRLPVTVKTRIGVDN--DESYDYLASFIRQVSLAGCDTFIIHARKAWLHGVSPKE 184 Query: 189 -------DLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + + ++ R+ H+ ++ +GG ++ + + VD + Sbjct: 185 NREIPPLNYPWVYQIKRDFPHLTIVLNGGITCLKRAYQQLQH--VDAVMIGRAAWYNPYL 242 Query: 241 IGELKAYLATQ 251 +L A ++ Q Sbjct: 243 FAQLDALISPQ 253 >UniRef50_Q1QZQ6 Dihydrouridine synthase, DuS n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZQ6_CHRSD Length = 340 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 6/75 (8%) Query: 46 ELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED---AAKILSFGADKIS 101 LV + T W+ R+ + IP G I +LED A + G + Sbjct: 172 HLVVHARTRREGYRPPAHWEWIGRIQARLSIPVIANGDIWTLEDYWKARTL--SGCADVM 229 Query: 102 INSPALADPTLITRL 116 + LADP L R+ Sbjct: 230 LGRGMLADPWLARRI 244 Score = 45.6 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 28/76 (36%), Gaps = 1/76 (1%) Query: 173 EIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +V++ + E + +++ +P+IA+G T+E + +A + + Sbjct: 172 HLVVHARTRREGYRPPAHWEWIGRIQARLSIPVIANGDIWTLEDYWKARTLSGCADVMLG 231 Query: 232 SVFHKQIINIGELKAY 247 +K + Sbjct: 232 RGMLADPWLARRIKHW 247 >UniRef50_Q1J585 Enoyl-reductase (NADH) n=1 Tax=Streptococcus pyogenes MGAS10750 RepID=Q1J585_STRPF Length = 208 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + + ++K G ++ M G + +++V E +P+IA+GG H Sbjct: 5 VALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMSLVRQVVEAVSIPVIAAGGIAD-GHGAA 63 Query: 219 AFRDADVDGALAAS 232 A + + Sbjct: 64 AAFMLGAEAVQIGT 77 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 33 VPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V LAKR + G D ++ + G++ S V +V E + IP AGGI AA Sbjct: 5 VALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMSLVRQVVEAVSIPVIAAGGIADGHGAAA 64 Query: 92 ILSFGADKISINSPALADPT 111 GA+ + I + + Sbjct: 65 AFMLGAEAVQIGTRFVVAKE 84 >UniRef50_UPI000185BF4A 2-nitropropane dioxygenase, NPD n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BF4A Length = 368 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 44/150 (29%), Gaps = 8/150 (5%) Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + I ++ L +P + ++ FG V E+G+ + T E Sbjct: 121 DDYFPAKVEAILADN-FLPNPNALEFVSFTFGYPDKEVIARVK---ESGRKVILNATSIE 176 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV---CHVPLIA 206 V + G + + E + V E VP+IA Sbjct: 177 GVRAAAAAGADRIVLQGLAAGGHRAFVKGKDSSDSIGASVEELAQAVTEASAVTDVPIIA 236 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHK 236 +GG G E ++ A + F Sbjct: 237 AGGVGNREDVVK-LVGAGATAVQVGTRFLT 265 >UniRef50_B0KBD0 NADH:flavin oxidoreductase/NADH oxidase n=11 Tax=Thermoanaerobacteraceae RepID=B0KBD0_THEP3 Length = 641 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Query: 29 IGDIVPLAKRYAEEGADELVF----------YDITASSDGRVVDKSWVSRVAEVIDIPFC 78 + D + LAK ++G + + + + + S++ + ++IP Sbjct: 230 LEDAIRLAKILEDKGVAAIDVSLGSSCESGAITLQTLGTQKGLAWEFASKIKKQVNIPVI 289 Query: 79 VAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 G I + E A +IL G AD +++ P +ADP + + Sbjct: 290 AVGRINTPELAEEILVSGKADLVALGRPLVADPLFVEKA 328 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 15/129 (11%), Positives = 38/129 (29%), Gaps = 10/129 (7%) Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--- 182 ++ V + + + + ++ +G I +++ + Sbjct: 200 ILDEIKKEIGADFPIIVRISADEFVPGGWALEDAIRLAKILEDKGVAAIDVSLGSSCESG 259 Query: 183 -------GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 G + G E K+++ ++P+IA G T E E D Sbjct: 260 AITLQTLGTQKGLAWEFASKIKKQVNIPVIAVGRINTPELAEEILVSGKADLVALGRPLV 319 Query: 236 KQIINIGEL 244 + + + Sbjct: 320 ADPLFVEKA 328 >UniRef50_D1VVG5 Putative enoyl-(Acyl-carrier-protein) reductase II n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVG5_9FIRM Length = 310 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEH 215 ++ + ++K GA I++ G + L +V + ++P++A+GG G+ Sbjct: 115 VSSIALAKRMEKLGADGIIVEGEEAAGHIGDISTMVLLPQVAQAVNIPVVAAGGIGSGRQ 174 Query: 216 FLEAFRDADVDGALAASVFH 235 A G + Sbjct: 175 IFAA-EVLGASGIQFGTSLL 193 Score = 42.1 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Query: 33 VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + LAKR + GAD ++ A+ G + + +VA+ ++IP AGGI S Sbjct: 118 IALAKRMEKLGADGIIVEGEEAAGHIGDISTMVLLPQVAQAVNIPVVAAGGIGSGRQIFA 177 Query: 92 ILSFGADKISINSPALADPTL 112 GA I + LA Sbjct: 178 AEVLGASGIQFGTSLLATFEC 198 >UniRef50_Q12NI3 NADH:flavin oxidoreductase/NADH oxidase n=14 Tax=Proteobacteria RepID=Q12NI3_SHEDO Length = 369 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 10/106 (9%) Query: 35 LAKRYAEEGADELVFYDITASSDGR-------VVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 LAK + G D L + + S+ + + +P G I Sbjct: 250 LAKALQQLGCDFLHVS--SGGLSSQQVIPIEAGYQVSFSEAIKAQVSMPVIAVGLITEAT 307 Query: 88 DAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 A I++ AD +++ L +P + A++ V Sbjct: 308 QAEAIINTHAADAVALARGILYNPHWVWHAAEQLKATVNVPAQYLR 353 >UniRef50_Q4QEB3 Inosine-5'-monophosphate dehydrogenase n=8 Tax=cellular organisms RepID=Q4QEB3_LEIMA Length = 553 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 23/142 (16%) Query: 9 CLDVRDGQ------VVKGVQFRNHEIIGDIV-------PLAKRYAEEGADELVF------ 49 +D+ G +VK ++ DI+ A+ + GAD L Sbjct: 319 VVDIAHGHSDLCIDMVKALKVNPLTNKVDIIAGNIATAEAAQDLIDAGADGLKIGVGPGS 378 Query: 50 YDITASSDGRV-VDKSWV---SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 IT G S V +RVA+ +P GGIK+ D K ++ GAD + + + Sbjct: 379 ICITRLVAGSGVPQLSSVMDCARVAKKHGVPCIADGGIKTAGDICKAIAAGADTVMLGNM 438 Query: 106 ALADPTLITRLADRFGVQCIVV 127 R+ + G + ++ Sbjct: 439 LAGTDEAPGRVLVKDGKKVKII 460 Score = 42.9 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 50/168 (29%), Gaps = 29/168 (17%) Query: 77 FCVAGGI----KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 V I + E AA ++ GAD + ++ A L + V + +D Sbjct: 291 LIVGAAIGVKKEDHERAAALVDAGADVLVVD-IAHGHSDLCIDMVKALKVNPLTNKVDII 349 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK-----RGAGEIVLNM-MNQDGVRN 186 + T D + G G I + + GV Sbjct: 350 -----------------AGNIATAEAAQDLIDAGADGLKIGVGPGSICITRLVAGSGVPQ 392 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + +V + VP IA GG T +A A D + ++ Sbjct: 393 LSSVMDCARVAKKHGVPCIADGGIKTAGDICKAI-AAGADTVMLGNML 439 Score = 39.8 bits (92), Expect = 0.086, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 45/124 (36%), Gaps = 17/124 (13%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVA-----EVIDIPFCVAGGIKSLED 88 A + GAD LV + + V + +DI +AG I + E Sbjct: 305 ERAAALVDAGADVLVV---DIAHGHSDLCIDMVKALKVNPLTNKVDI---IAGNIATAEA 358 Query: 89 AAKILSFGAD--KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 A ++ GAD KI + ++ ITRL GV + +D A+ Sbjct: 359 AQDLIDAGADGLKIGVGPGSIC----ITRLVAGSGVPQLSSVMDCARVAKKHGVPCIADG 414 Query: 147 GDES 150 G ++ Sbjct: 415 GIKT 418 >UniRef50_C7QGH7 Thiazole biosynthesis family protein n=2 Tax=Actinobacteria (class) RepID=C7QGH7_CATAD Length = 296 Score = 45.6 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 7/89 (7%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFCVAGGIKS 85 D V LAKR + G + G + + + + + IP + GI + Sbjct: 165 SDDPV-LAKRLEQIGCAA---VMPAGAPIGSGLGVRNPHNIELMVDAVSIPVILDAGIGT 220 Query: 86 LEDAAKILSFGADKISINSPALADPTLIT 114 DA + G + + + + Sbjct: 221 ASDATLAMELGCSAVMLATAVTRAQHPVA 249 >UniRef50_B1MW76 NADH:flavin oxidoreductase, Old Yellow Enzyme family n=4 Tax=Lactobacillales RepID=B1MW76_LEUCK Length = 411 Score = 45.6 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 5/93 (5%) Query: 31 DIVPLAKRYAEEGADELVFYDITA---SSDGRVVDKSWVSRVAEVID--IPFCVAGGIKS 85 D + A++ + D L A S + VSR + + P VAG +K Sbjct: 243 DSIAFAQKLTQLPVDYLHLSLKDATQTSFRDKKDTTPIVSRYRQALPDQYPIMVAGLLKQ 302 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLAD 118 ++ GA ++ + DP + ++ Sbjct: 303 PGQVEALMDLGATFAALGRQLIIDPNWVEKIVA 335 >UniRef50_O29513 Dihydroorotate dehydrogenase n=3 Tax=Archaeoglobaceae RepID=PYRD_ARCFU Length = 299 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 21/109 (19%) Query: 31 DIVPLAKRYAEEGADELVF--------YD----------ITASSDG---RVVDKSWVSRV 69 D + LAK + G D + D ++ G + + V + Sbjct: 169 DYLKLAKVLEDAGVDGITISNTLRGMKIDIMSGKPVLSNLSGGVSGPAIKPIALKCVYDL 228 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + I++P GGI S ED + + GA + I S + L + Sbjct: 229 YKEIEVPIVGCGGITSFEDVLEFIMAGARAVQIGSAVYYSRRIFYSLKE 277 Score = 42.1 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 34/112 (30%), Gaps = 22/112 (19%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGV----------------RNGYDLEQLK-----KV 196 + L + ++ G I ++ + +G ++ + + Sbjct: 169 DYLKLAKVLEDAGVDGITISNTLRGMKIDIMSGKPVLSNLSGGVSGPAIKPIALKCVYDL 228 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + VP++ GG + E LE F A S + LK L Sbjct: 229 YKEIEVPIVGCGGITSFEDVLE-FIMAGARAVQIGSAVYYSRRIFYSLKESL 279 >UniRef50_Q39TJ5 2,4-dienoyl-CoA reductase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TJ5_GEOMG Length = 688 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 49/153 (32%), Gaps = 14/153 (9%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGR---------VVDKSWVSRVAEVIDIPFCVAGGI 83 V A + GAD L T G V + IP G I Sbjct: 239 VAFAVELEKAGADVLNVSLATPPICGGYVPTGADPVATHVHLAEAVKRAVGIPVIGVGRI 298 Query: 84 KSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGID---TWYDAETGK 139 K+ + A IL+ G D ++I ADP + A+ + IV ID + A G+ Sbjct: 299 KTPDVAESILAQGKVDLVAIGRQLFADPHWPLKAAEG-RIAEIVPCIDCHECYERATAGE 357 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 R + + + V G G Sbjct: 358 GVECTVNYAAGREDERRIRPAERKRRVLVVGGG 390 >UniRef50_D1Z6W7 Whole genome shotgun sequence assembly, scaffold_7 n=1 Tax=Sordaria macrospora RepID=D1Z6W7_SORMA Length = 614 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNG-YDLEQLKKVRE-VCH 201 + R T+ TL + Q V + GA + ++ ++ G + G + E ++ +RE + Sbjct: 205 VTAKIRILETKEATLKYAQNVLRAGASILTVHGRRREQKGHQTGLANWEYIRYLRENLPK 264 Query: 202 VPLI-ASGGAGTMEHFLEAFRDADVDGALAA 231 +I A+G + DG ++A Sbjct: 265 ETVIFANGNILQYSDLEKCLEATGADGVMSA 295 >UniRef50_UPI0001C41BF5 inosine-5''-monophosphate dehydrogenase GuaB n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41BF5 Length = 497 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 55/209 (26%), Gaps = 25/209 (11%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWV-------SRVAEVIDIPFCVAGGIKSL 86 E + L + + G + K + + V + A G L Sbjct: 174 EALDIAYENKVERLPVVNEDGALVGILTIKDILNQDQHPNAAVDKNGKYLVAAACGPFDL 233 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + A + GAD ISI+ + VV Sbjct: 234 DRAMALDEAGADIISIDCAHAHNMN--------------VVKFAETIKDNIDADLCMGNI 279 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPLI 205 + D ++ G G I + GV + + V +P+I Sbjct: 280 ATKEAAEDLIAHGADGLK--VGIGPGSICTTRIVAGIGVPQLTAIADVADVAGEAGIPVI 337 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVF 234 A GG +A A D + ++ Sbjct: 338 ADGGLRYSGDIAKAIG-AGADVVMLGNLL 365 >UniRef50_Q47R37 Thiazole synthase n=124 Tax=Bacteria RepID=THIG_THEFY Length = 266 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 7/94 (7%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEVIDIPFCVAGGIKSLE 87 D V LA+R A+ G + A + + + + E +D+P + GI + Sbjct: 147 DDPV-LARRLAQVGCAA--VMPLGAPIGSGMGIRNPHNIELIVEELDVPVILDAGIGTAS 203 Query: 88 DAAKILSFGADKISINSPAL--ADPTLITRLADR 119 DAA + G D + + + DP L+ Sbjct: 204 DAALAMELGCDAVLLATAVTRAQDPVLMAHAMRE 237 >UniRef50_C0QYH6 Dihydroorotate dehydrogenase n=2 Tax=Brachyspira RepID=PYRD_BRAHW Length = 303 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 23/104 (22%) Query: 29 IGDIVPLAKRYAEEGADELVFYD----------------------ITASSDGRVVDKSWV 66 + DI +AK + GAD + + ++ + R + V Sbjct: 170 VTDIASIAKAVEDAGADSVSLVNTFLSMKIDTKTRKPLLGNIFGGLSGA-CIRPIAVRMV 228 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 +V + + IP GGI + DA + + GA +SI + ++P Sbjct: 229 YQVYKAVKIPIVGMGGITNYNDALEFILAGASLVSIGAGIFSNP 272 >UniRef50_A6NSI8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NSI8_9BACE Length = 650 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 + + ++ +++P V G IK++E A +I++ G AD +++ LADP I + Sbjct: 282 HNVPFAEKIRSQVNVPIAVVGSIKTMEQAEEIIAKGAADVVAMARQLLADPDTIKKA 338 >UniRef50_UPI000169A137 bifunctional sulfur carrier protein/thiazole synthase protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI000169A137 Length = 182 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 13/107 (12%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRV 69 ++DG F D +AKR E G + A + ++ + + Sbjct: 2 IKDG-------FDVMVYTNDDPIMAKRLEELGCCA--VMPLAAPIGSGLGIRNRLNIRTI 52 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS--PALADPTLIT 114 E +P V G+ + DAA + G D + +N+ A DP L+ Sbjct: 53 VENARVPILVDAGVGTASDAAVAMELGCDGVLMNTAIAAAQDPLLMA 99 >UniRef50_UPI0001C31DA9 dihydroorotate dehydrogenase family protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31DA9 Length = 303 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R V + VS VA+ + IP GG++ DA +L GA +++ + + DP R+A Sbjct: 226 RAVALAQVSDVAQRVSIPLIAMGGVQRGRDADDLLRAGATLVAVGTESFRDPAAGRRVAH 285 Query: 119 R 119 Sbjct: 286 E 286 >UniRef50_Q2FKX6 Tryptophan synthase alpha chain n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKX6_METHJ Length = 259 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 60/235 (25%), Gaps = 48/235 (20%) Query: 27 EIIGDI-----VPLAKRYAEEGADELV--------FYD----------ITASSDGRVVDK 63 + GD + + K GAD + D AS Sbjct: 20 TVAGDPDFETSLEIIKALENGGADIIELGLPFSDPVADGPVIQQADQRALASGMNTDRFF 79 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 V V + DIP V N D + A G+ Sbjct: 80 DLVREVRKSSDIPLVV-------------------LTYTNLILQRDINTFYQDAADAGID 120 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 +VV + +A T + + + ++ + G Sbjct: 121 AVVVADLPYEEAGPYITAAETAGVAPVMMVSTTTSPERLSKILTVKSGFIYLVAALGVTG 180 Query: 184 VRNGYDL---EQLKKVREVCHVPLIASG-GAGTMEHFLEAFRDADVDGALAASVF 234 +R D + L ++ +P IA G G E E DA D + S Sbjct: 181 MRQKTDPVAQKLLADLKNRTDIP-IAPGFGISDREQVREW-TDAGADAVIVGSAL 233 Score = 41.4 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 20/52 (38%) Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 V + ++ + DIP GI E + GAD + + S + + Sbjct: 187 PVAQKLLADLKNRTDIPIAPGFGISDREQVREWTDAGADAVIVGSALVREIE 238 >UniRef50_Q3ZZ14 Indole-3-glycerol phosphate synthase n=5 Tax=Dehalococcoides RepID=TRPC_DEHSC Length = 259 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 69/243 (28%), Gaps = 47/243 (19%) Query: 7 IPCLDV---RDGQVVKGVQFRNH--------EIIGDIVPLAKRYAEEGADELVFYDITAS 55 P +D+ G+ V+ + D V +A YA GA + Sbjct: 35 YPPIDMAMKLKGRQVRLIAEVKKASPSKGIIRSDFDPVDIAGIYARNGASAISVLTEEHH 94 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 G + + + +P I + +GAD I + A+ P + Sbjct: 95 FMGSLDNLKKIRESGVASKLPLLRKDFIHDPYQVYESRLYGADAILLI-VAMLSPERLQE 153 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 L ++ G + V L+ E R I+ Sbjct: 154 LLS-----------------------LSHKLGMKCLVEVHTRSELEIALESNAR----II 186 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVP----LIASGGAGTMEHFLEAFRDADVDGALAA 231 N+D DL +++R + +P +++ G T + VD L Sbjct: 187 GLN-NRDLHTFKIDLTVTERLRPL--IPPECIVVSESGIQTRADISR-LEELGVDAVLVG 242 Query: 232 SVF 234 Sbjct: 243 EAL 245 >UniRef50_Q1IWK7 Fructose-1,6-bisphosphate aldolase, class II n=3 Tax=Deinococci RepID=Q1IWK7_DEIGD Length = 308 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 65/178 (36%), Gaps = 11/178 (6%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCV--AGGIKSLEDAAKILSFGADKISINSPALADPT 111 A G + V +AE +P + G S E A K + G + I++ Sbjct: 52 AIKYGGQDLANIVLDLAERASVPVALHLDHG-SSYESALKAIKMGFTSVMIDASHHPFEE 110 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + +AE G+ + + + V+ V++ G Sbjct: 111 NVHETRRVVEAAH---AMGISVEAELGRLGGIEEHVVVDEKDAFLTDPEEAVRFVEQTGT 167 Query: 172 GEIVLNMMNQDGVRNG-----YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + + + G G DL +++++ E+ +PL+A G +G ++ FRDA Sbjct: 168 DYLAIAIGTSHGAYKGKGRPFIDLARIQRISELVSIPLVAHGSSGVPAELVQRFRDAG 225 >UniRef50_A8VXV8 Tryptophan synthase alpha chain n=2 Tax=Bacillus RepID=A8VXV8_9BACI Length = 266 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 75/238 (31%), Gaps = 25/238 (10%) Query: 21 VQFRNHEIIGDI-----VPLAKRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVI 73 +F + + D V +A + G + + +DG V+ ++ + Sbjct: 14 KRFVPYMMSSDPTPDLSVEIALMLQDAGVEAIEWGVPYSDPLADGPVIQQAGQRALKNGG 73 Query: 74 DIPFCVAGGIKSLEDAAKILSFG-----ADKISINSPALADPTLITRLADRFGVQCIVVG 128 + SL+ + + G +N T + +G +++ Sbjct: 74 SLTV-------SLQKMKEARAKGLTVPSVLFTYVNPVLSYGFTKLIEELKDYGFDGLLIP 126 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 + ++ + G + + ++ + + G R + Sbjct: 127 DLPYEESHEYRALCR-EKGISLIPLIAPSSKSRVEKITKEADGFVYYVTSLGVTGTRESF 185 Query: 189 DL---EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 E++ V+ VP++A G T EH DGA+ S ++I ++ + Sbjct: 186 SETLKEEINTVKSFSKVPVLAGFGISTPEHVQYFQEH--ADGAIVGSALVRKIASLED 241 >UniRef50_Q3A2H5 NADH oxidase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A2H5_PELCD Length = 637 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 14/91 (15%) Query: 34 PLAKRYAEEGADELVF-YDI---------TASSDGRVVDKSWVSRVAEVID--IPFCVAG 81 +AK E G D L F + + + GR + + E I +P VAG Sbjct: 234 DMAKIMVENGIDALHFSAGLAESNQYTIPSGAL-GRGWNADGAEAIKEAIGSKVPVSVAG 292 Query: 82 GIKSLEDAAKILSFG-ADKISINSPALADPT 111 I + E A IL+ G AD +S+ LADP Sbjct: 293 RINNRETAEAILASGKADLVSMGRGLLADPN 323 >UniRef50_C8P8F1 2-enoate reductase n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P8F1_9LACO Length = 707 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 12/97 (12%) Query: 33 VPLAKRYAEEGADELVF----YDITASSDGRVVDKS------WVSRVAEVIDIPFCVAGG 82 V LAK GAD L D T V V + E + IP G Sbjct: 293 VRLAKEVERVGADALNVTIATAD-TQVLISEPVSYEPGWRQYLVKAIKEAVSIPIIAVGV 351 Query: 83 IKSLEDAAKILSFGA-DKISINSPALADPTLITRLAD 118 I++ A IL G D I + P LADP + + + Sbjct: 352 IRTPNQAEAILRSGTQDFIGLARPMLADPQWMQKARE 388 >UniRef50_B6KJZ7 Inosine-5'-monophosphate dehydrogenase n=4 Tax=Alveolata RepID=B6KJZ7_TOXGO Length = 551 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 46/162 (28%), Gaps = 11/162 (6%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + AK E GAD LV +S + V R+ + G + + A + Sbjct: 241 IERAKALQEAGADVLVV---DSSQGDSIYQVDLVKRLKAAFPELQIIGGNVVTARQAKSL 297 Query: 93 LSFGAD--KISINSPALADPTLI-----TRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + G D +I + S ++ ++ + + V G + + Sbjct: 298 IDAGVDGLRIGMGSGSICTTQVVCAVGRAQATAVYHVCKYAREHGDLPCIADGGIQNSGH 357 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + ++ GE + + G Sbjct: 358 VMKALALGANAVMMGSMLAGTEEAP-GEYYFHNGVRVKTYRG 398 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 46/168 (27%), Gaps = 30/168 (17%) Query: 84 KSLEDAAKILSFGADKISINSP---ALADPTLITRLADRFG-----VQCIVVGIDTWYDA 135 +E A + GAD + ++S ++ L+ RL F +V Sbjct: 239 HDIERAKALQEAGADVLVVDSSQGDSIYQVDLVKRLKAAFPELQIIGGNVVTARQAKSLI 298 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 + G + G S + Q K Sbjct: 299 DAGVDGLRIGMGSGSICTTQVVCAVGRAQATAVYHVC---------------------KY 337 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 RE +P IA GG H ++A + + S+ GE Sbjct: 338 AREHGDLPCIADGGIQNSGHVMKAL-ALGANAVMMGSMLAGTEEAPGE 384 >UniRef50_A8MLA4 NADH:flavin oxidoreductase/NADH oxidase n=3 Tax=Clostridiaceae RepID=A8MLA4_ALKOO Length = 352 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 10/109 (9%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVF---YDITASSDGRVVDKS--WV----SRVAEVI 73 N + + +AK++ G D L +D T D W+ +++ E + Sbjct: 218 GSNENDLQTSIEMAKKFEALGMDYLHISTGFDNTPIETELPEDFPCNWIVYGATKIKEAV 277 Query: 74 DIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFG 121 +IP IK+ E ++ D ++I LAD + L + G Sbjct: 278 NIPVVAVNSIKTAEHIQYLVDGDLVDFVAIGRAQLADYNFVKHLQEGNG 326 >UniRef50_B7CCQ8 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCQ8_9FIRM Length = 131 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 12/101 (11%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITAS--------SDGRVVDKSWVSRVAEVIDIPFCVA 80 I DI A+ + + G D F DI+ + + +P + Sbjct: 33 IKDIPVAARIFEQAGID---FLDISGGHCIYTIKGKTASGWFAELSKPAKQAVKVPVMLT 89 Query: 81 GGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADRF 120 GG+K+ EDA K+L A D I + + D + Sbjct: 90 GGVKTGEDAEKLLEGQAVDLIGVGRSMMRDAEWTQKALAEV 130 >UniRef50_Q483F7 FMN-dependent dehydrogenase n=1 Tax=Colwellia psychrerythraea 34H RepID=Q483F7_COLP3 Length = 381 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 11/83 (13%) Query: 33 VPLAKRYAEEGADELVFYD-----ITASSDGRVVDKSWVSRVAEVI--DIPFCVAGGIKS 85 V AKR E GA ++ + + ++ + + + DI V GGI+ Sbjct: 257 VDDAKRAVEIGATSIIISNHGGRQLDSA----PAPIDIIQEIRAAVGDDIEIIVDGGIRR 312 Query: 86 LEDAAKILSFGADKISINSPALA 108 D K ++ GA+ SI + Sbjct: 313 GSDIIKAIALGANVCSIGRAYVY 335 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 9/93 (9%), Positives = 32/93 (34%), Gaps = 4/93 (4%) Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVC--HVPL 204 + + ++D + + GA I+++ + + ++ ++++R + + Sbjct: 245 WGGKFAIKGIISVDDAKRAVEIGATSIIISNHGGRQLDSAPAPIDIIQEIRAAVGDDIEI 304 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 I GG ++A + + Sbjct: 305 IVDGGIRRGSDIIKAI-ALGANVCSIGRAYVYG 336 >UniRef50_C8PNQ6 Putative N-acetylmannosamine-6-phosphate epimerase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PNQ6_9SPIO Length = 154 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 49/155 (31%), Gaps = 30/155 (19%) Query: 86 LEDAAKILSFGADKISINSPALADP------TLITRLADRFGVQCIVVGIDTWYDAETGK 139 +++ ++++ G + I+I+ +L+ P I + ++ Q ++ ++ DA Sbjct: 1 MDEVDQLVAVGCEVIAIDCTSLSRPGNLTASEYIRAIKKKYPHQLLMADCASFEDAYNAA 60 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 + G V + V +G + +K+ Sbjct: 61 AAGVDFVGTTMNGYVGG-----------------------DTASVLDGPNYRLAEKIASS 97 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 VPLIA G E E + + Sbjct: 98 ISVPLIAEGRIHRPEDAAEMLK-LGALAVVVGGAI 131 Score = 42.5 bits (99), Expect = 0.013, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Query: 50 YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 +S + ++A I +P G I EDAA++L GA + + A+ Sbjct: 75 VGGDTASVLDGPNYRLAEKIASSISVPLIAEGRIHRPEDAAEMLKLGALAVVVG-GAITR 133 Query: 110 PTLITRLADRF 120 P +A+RF Sbjct: 134 P---KEIAERF 141 >UniRef50_A8RW12 Putative uncharacterized protein n=2 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW12_9CLOT Length = 305 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 62/177 (35%), Gaps = 15/177 (8%) Query: 64 SWVSRVAEVIDIPF--CVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + +AE ++P + G + E G I +++ A I R Sbjct: 64 PMIKTLAEQTNVPVALILDHG-RDWEKITWAYRQGFSSIMVDASAYDMEENIARTKKA-- 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE-TLDWVQEVQKRGAGEIVLNMMN 180 V A G+ V+ + + V+ VQ+ G + + Sbjct: 121 ----VELCHVQGLAVEGELGHVGQAATLDGCDVSLYTKPEEAVRFVQETGVDSLAIACGT 176 Query: 181 QDGVR-NGY----DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 G G+ + + +K V++ ++PL GG+G+ + + +A ++ A+ Sbjct: 177 AHGDYPKGFIPTINFDVIKGVKQAVNMPLALHGGSGSGDENIRKAVEAGINKVNIAT 233 Score = 42.9 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 6/86 (6%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRV-----VDKSWVSRVAEVIDIPFCVAGGI 83 + E G D L TA D ++ + V + +++P + GG Sbjct: 152 YTKPEEAVRFVQETGVDSLAIACGTAHGDYPKGFIPTINFDVIKGVKQAVNMPLALHGGS 211 Query: 84 KSL-EDAAKILSFGADKISINSPALA 108 S E+ K + G +K++I + Sbjct: 212 GSGDENIRKAVEAGINKVNIATEIFN 237 >UniRef50_A8VW59 Argininosuccinate synthase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VW59_9BACI Length = 409 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 44/121 (36%), Gaps = 16/121 (13%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA-DKISINSPALADPT 111 ++ + +V++ + +P + GG ++ + + L G D I + P P Sbjct: 274 DSTKRREAYFIDFAEKVSQKVRVPIVLTGGFRTKKVMEEALITGVTDMIGVARPLAIHPD 333 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 L + + F + V D TG + E + + +++ + GA Sbjct: 334 LPAQFSSGFADE--VHLPDIK-------------TGFRAIDDAALLELMWYARQLHRHGA 378 Query: 172 G 172 G Sbjct: 379 G 379 >UniRef50_UPI0000586CAD PREDICTED: similar to Dus1l protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000586CAD Length = 291 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 7/50 (14%), Positives = 18/50 (36%), Gaps = 6/50 (12%) Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS------VFHKQII 239 ++ +P+ A+G +++ + VDG + A + Sbjct: 1 MKAAVKIPVFANGNIQSLQDVHRCMEETGVDGVMTAEGNLHNPALFEGTH 50 >UniRef50_Q163H4 L-lactate dehydrogenase, putative n=19 Tax=Rhodobacterales RepID=Q163H4_ROSDO Length = 385 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 35/124 (28%), Gaps = 7/124 (5%) Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LE 191 + Y + V + + ++KRG I ++ ++ Sbjct: 233 RTSPDWDYVAWLRDAWDGPFVVKGVLRAEDAEPLKKRGVDAIWVSNHAGRQFDAAPASID 292 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK-----QIINIGELKA 246 L+ +R +PLI G L A D + FH + + L Sbjct: 293 ALRDIRAATDLPLIFDSGIEGGLDILRA-YACGADFVMLGRAFHYALAALGPLGVDHLID 351 Query: 247 YLAT 250 L Sbjct: 352 ILTK 355 Score = 41.4 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 1/77 (1%) Query: 33 VPLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 A+ + G D + + D + + D+P GI+ D + Sbjct: 260 AEDAEPLKKRGVDAIWVSNHAGRQFDAAPASIDALRDIRAATDLPLIFDSGIEGGLDILR 319 Query: 92 ILSFGADKISINSPALA 108 + GAD + + Sbjct: 320 AYACGADFVMLGRAFHY 336 >UniRef50_C0C2K5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2K5_9CLOT Length = 687 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 18/103 (17%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASS--------------DGRVVDKSWVSRV 69 + + V LAK + G D + D++AS + + + V Sbjct: 232 EGGRDLEESVTLAKVLEKNGVDAI---DLSASQPSAYLMTTPPYCLPQAKGMLVPYSESV 288 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPT 111 +DIP A GI+ E A +I++ G AD I++ P LADP Sbjct: 289 RRAVDIPVFTAIGIRDPEYAEQIIAEGKADLIALGRPQLADPD 331 >UniRef50_B8C389 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C389_THAPS Length = 615 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 49/163 (30%), Gaps = 11/163 (6%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 AAK++ D I +N I Q + + A + + Sbjct: 159 DFAKAAKLVEKYCDAIDLNLGCPQRTAFIGHFGSYLLGQKDRKLVLSIVRAGSKAVSIPI 218 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-----NQDGVRNGYDLEQLKKVR-- 197 + T ET E++ GA I ++ + G L +V Sbjct: 219 FVKIRLLD--TVEETTKLCHELRDAGASLIAIHARYRATWERTGPGARDGPALLDQVAVV 276 Query: 198 --EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + P+IA+G T + + + DG ++A Sbjct: 277 KQSMPDFPIIANGNVITYDDVISNKQSTGADGIMSAEGILDNP 319 >UniRef50_A1ALX2 Indole-3-glycerol phosphate synthase n=4 Tax=Desulfuromonadales RepID=A1ALX2_PELPD Length = 267 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 54/206 (26%), Gaps = 35/206 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y GA L GR+ + + R+ +D+P I Sbjct: 78 DPLEIARIYETNGATCLSVLTDQHFFMGRLENLT---RIRGEVDLPLLRKDFILDPFQIY 134 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD I + + L P +I D A + DE Sbjct: 135 EARCAGADAILLITAILELPQMI----------------DYITLARDLSLDILLEVHDER 178 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV--CHVPLIASG 208 V + V R DL ++ + L+A Sbjct: 179 ELDVALRTDCTLI-GVNNRNLRTFT------------TDLATTGRLASMLPPEHLLVAES 225 Query: 209 GAGTMEHFLEAFRDADVDGALAASVF 234 G T E D L Sbjct: 226 GISTRADI-ERLAADGADAFLIGESL 250 >UniRef50_P00937 Indole-3-glycerol phosphate synthase n=12 Tax=Dikarya RepID=TRPG_YEAST Length = 484 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 72/227 (31%), Gaps = 45/227 (19%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWV--SRVAEVIDIPFCVAGGIK-----S 85 A +YAE GA + +T + V ++ ++ P ++ S Sbjct: 291 AEQALKYAEAGASAISV--LTEPHWFHGSLQDLVNVRKILDLKFPPKERPCVLRKEFIFS 348 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + GAD + + L+ P L+ L Y Sbjct: 349 KYQILEARLAGADTVLLIVKMLSQP-LLKEL--------------------------YSY 381 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL- 204 + D + + + + + +Q + GA + +N +D DL + E + Sbjct: 382 SKDLNMEPLVEVNSKEELQRALEIGAKVVGVNN--RDLHSFNVDLNTTSNLVESIPKDVL 439 Query: 205 -IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 IA G T + + ++ V G L K ++K ++ Sbjct: 440 LIALSGITTRDDAEK-YKKEGVHGFLVGEALMKST----DVKKFIHE 481 >UniRef50_C5RFG0 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RFG0_CLOCL Length = 384 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLI 113 +S R + ++ E + I V GGI LED + G D +S++ P + +P LI Sbjct: 288 ASVDRKYNVPAAKKIKESVGIQVIVIGGIHDLEDIESTINEDGIDFVSMSRPLILEPGLI 347 Query: 114 TRLAD 118 + Sbjct: 348 NKFKQ 352 Score = 41.8 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 11/123 (8%) Query: 113 ITRLADRFGVQCIVVG--IDTWYDAET-GKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 I+RL ++ GV I V ID GK V D + ++ Sbjct: 224 ISRLLEKCGVDAIEVSCGIDWKQMGPARGKVPVEMIMHDYPGIKNLPKPVKTLLKPFVPM 283 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 E +++ Y++ KK++E + +I GG +E + +D Sbjct: 284 MMEE---ASVDRK-----YNVPAAKKIKESVGIQVIVIGGIHDLEDIESTINEDGIDFVS 335 Query: 230 AAS 232 + Sbjct: 336 MSR 338 >UniRef50_A0CRF7 Chromosome undetermined scaffold_25, whole genome shotgun sequence n=2 Tax=Oligohymenophorea RepID=A0CRF7_PARTE Length = 501 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 10/152 (6%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSR 68 LD +V G N D + AKR G D +V + ++ + V + Sbjct: 236 VLDQMGRLIVGGAVGAN----DDEITRAKRLVNSGCDVIV---LDVANGHSQLAIRTVEQ 288 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 + + + + G I + + A +++ GAD I ITR+ GV Sbjct: 289 LKKEVSVDVIA-GSIATGDGARRLIQAGADG--IRCGIGNGSICITRVVSGCGVPQFSAL 345 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETL 160 +D + K + G+++ + + + Sbjct: 346 MDVAPVCKEYKIPLMSDGGNKNSGNMCKALAV 377 >UniRef50_B4YSU4 BaiH n=2 Tax=Clostridium hylemonae RepID=B4YSU4_9CLOT Length = 672 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 55/189 (29%), Gaps = 25/189 (13%) Query: 83 IKSL-EDAAKILSFGADKISINSP-------ALADPTLITRLADRFGVQCI-------VV 127 I+ A ++ G IS++ P R+ + G V+ Sbjct: 158 IRQFGAAARRVQEAGCGGISLHCAHAYMQPGTFLSPLRNKRMDEYGGCLDNRARFILEVI 217 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM--------- 178 + + + + + + L + + G + ++ Sbjct: 218 EEVRKNVSADFPVFLRISGDERAEGGNSLEDMLYLAPKFEAAGVDLLEVSGGTQYEGLEY 277 Query: 179 -MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + G R G ++ + ++++V +P+ A G + + + VDG Sbjct: 278 TIPSQGKRIGMNIYEAAEIKKVVGIPVYAVGKINDIRYAADIVERGIVDGVAVGRPLLAD 337 Query: 238 IINIGELKA 246 + K Sbjct: 338 PDLCKKAKE 346 Score = 41.0 bits (95), Expect = 0.035, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 14/111 (12%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD------ITASSDGRVV----DKSWVSR 68 + + E D++ LA ++ G D L + + + + + Sbjct: 239 RAEGGNSLE---DMLYLAPKFEAAGVDLLEVSGGTQYEGLEYTIPSQGKRIGMNIYEAAE 295 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLAD 118 + +V+ IP G I + AA I+ G D +++ P LADP L + + Sbjct: 296 IKKVVGIPVYAVGKINDIRYAADIVERGIVDGVAVGRPLLADPDLCKKAKE 346 >UniRef50_UPI0001C41EDE NADH-dependent flavin oxidoreductase n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41EDE Length = 335 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 7/107 (6%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS----DGRVVDKSWVSRVAEV 72 V G + +AK AE GAD + T S G S+ R+A+ Sbjct: 203 AVDGRKGGMTLDES--FKIAKILAEAGADSVQITARTISFKFGETGDHAFLSYADRMAKE 260 Query: 73 IDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLAD 118 +DIP + G ++ ++ +IL + +S+ P +A ++ + Sbjct: 261 LDIPVILGGTLRDMKTMNEILNETDIEFLSLAKPFVAQQDFLSEWKE 307 >UniRef50_C5EWF6 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWF6_9FIRM Length = 325 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 30/133 (22%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEII-------GDI--------VPLAKRYAEEGADELVF 49 RI LDV + V+ R++ + D V A+ E GA F Sbjct: 191 RIRLTLDVL--RSVRDAVGRDYPVSVRFPVQDYDPAGSSLEEGVRAARLIQEWGAS---F 245 Query: 50 YDITA---------SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADK 99 D++ + + + + IP V GGI A ++L+ AD Sbjct: 246 LDLSGGPKYRYFHPFIQSPGWFGDDAAVIRQAVRIPVMVTGGITEYSHAEQLLNDHKADL 305 Query: 100 ISINSPALADPTL 112 + L +P Sbjct: 306 TGVCRAVLKNPQW 318 >UniRef50_B8F9B4 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9B4_DESAA Length = 415 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 25/88 (28%), Gaps = 1/88 (1%) Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITR 115 + + + + IP GG + E + + G D +S+ +ADP L Sbjct: 312 AQEGFNLHYAREFKKKLSIPVICVGGFLTREHMEQAIDGGACDAVSVGRAMIADPYLFRN 371 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVN 143 + + A Sbjct: 372 ILNGENGPKCSFCNACIARAGRLPVDCY 399 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%) Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + G++L ++ ++ +P+I GG T EH +A D Sbjct: 311 PAQEGFNLHYAREFKKKLSIPVICVGGFLTREHMEQAIDGGACDAVSVGRA 361 >UniRef50_D1VVP0 Putative enoyl-(Acyl-carrier-protein) reductase II n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVP0_9FIRM Length = 308 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 55/170 (32%), Gaps = 5/170 (2%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + ++V+E+ + +GG + E + + + + ++ + D+ Sbjct: 25 EFAAKVSELGALGQIASGGF-TAEQVRSGIKK--IRTLTDKAFGVNVVILNKDIDKLAEV 81 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 I +D + D + + + V+ GA ++ G Sbjct: 82 VIEEKVDIITVGAGNPKPYMKKWIDAGIRVIPIIANIKMAKSVEALGASAVIFEGAEAGG 141 Query: 184 VRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + +L + + ++P+I +GG +H A G S Sbjct: 142 HIGSLNTFPELPAIVDSVNIPVICAGGVYNGKHMFAA-EVLGASGVQIGS 190 >UniRef50_B0MII1 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0MII1_9FIRM Length = 337 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 15/166 (9%) Query: 70 AEVIDIPFCVA---GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 A ++P V GG + ED + + G + I+ L + + + IV Sbjct: 112 ARYPEVPVAVNLDHGG--AFEDIIQAIHAGFSSVMIDRSTLLYEENVREVKE------IV 163 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV-QKRGAGEIVLNMMNQDGVR 185 + + + TR L+ Q ++ G + + + GV Sbjct: 164 KVAHAVGVSVEAELGHVGQGDEYEETRDAGLTKLEEAQSYVEETGIDCLAVAVGTSHGVY 223 Query: 186 NGY---DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 G + E L + + +PL+ GG+GT + L + Sbjct: 224 KGTPHLEFELLSTLSKEIKIPLVLHGGSGTGDDNLAKAVKTGIQKV 269 >UniRef50_A3CL85 NADH-dependent flavin oxidoreductase, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CL85_STRSV Length = 367 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 5/107 (4%) Query: 29 IGDIVPLAKRYAEEGADELVFYDIT---ASSDGRVVDKSWVSRVAEVID--IPFCVAGGI 83 + D + L ++ D L +S + + ++ + I+ +P G I Sbjct: 237 LYDTLQLLEQLIYHQVDYLHISTSDVWRSSIRDSQDSEPVIQKIIKKINGRVPLIGVGQI 296 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 K+ +DA ++L G ++ L DP ++ + I D Sbjct: 297 KTKQDAQRVLDAGIPLFALGKALLLDPDWAEKVVSGREEEVIRAYRD 343 >UniRef50_C0W3B1 Indole-3-glycerol-phosphate synthase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3B1_9ACTO Length = 274 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 65/210 (30%), Gaps = 40/210 (19%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 +GD+ LA+ Y GA + T + + V +D+P V I + Sbjct: 70 VGDVAVLARFYEAGGAACVSVV--TEPVYSNGDLRD-LDAVRGAVDVPVLVNDLIVTPYQ 126 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCI--VVGIDTWYDAETGKYHVNQYT 146 + + GAD + A DP ++ L +R + VV + +A Sbjct: 127 VHEARAHGAD--LLKLDARLDPLILESLIERTASLGMLAVVEAHSRREA----------- 173 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-- 204 ++ A +D D + ++V EV + Sbjct: 174 ----------ITAVENGARCVAVDA---------RDPDTLEVDPSRFEQVAEVLPTSVLR 214 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVF 234 +A GG ++ + A D L Sbjct: 215 VAEGGVSGARDVMD-YARAGADVVLVGEAL 243 >UniRef50_B6KUE9 Dihydrouridine synthase domain-containing protein n=4 Tax=Eukaryota RepID=B6KUE9_TOXGO Length = 653 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 25/83 (30%), Gaps = 2/83 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + A+ G + + + + + IP G + DA Sbjct: 409 IDFARLCENCGIEAIAIHARETHERPSHRAHWDLFPALKSSLAIPLIANGDFLTRRDADV 468 Query: 92 ILS-FGADKISINSPALADPTLI 113 GAD + A+ DP++ Sbjct: 469 FQEKIGADSLMFARGAMWDPSIF 491 >UniRef50_D2RSQ6 Inosine-5'-monophosphate dehydrogenase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RSQ6_9EURY Length = 500 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 3/86 (3%) Query: 151 RTRVTQWETLDWVQEVQ-KRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPLIASG 208 TR + +D+ ++ G G I + + G+ + Q+ V VP+IA G Sbjct: 290 GTREAAEDLVDFADGLKVGIGPGSICTTRVVSGAGMPQITAVSQVADVASQNDVPVIADG 349 Query: 209 GAGTMEHFLEAFRDADVDGALAASVF 234 G ++A A D + S F Sbjct: 350 GIRYSGDAIKAV-AAGADAVMLGSYF 374 >UniRef50_Q04VP3 TRNA-dihydrouridine synthase n=4 Tax=Leptospira RepID=Q04VP3_LEPBJ Length = 339 Score = 44.8 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 13/117 (11%), Positives = 39/117 (33%), Gaps = 16/117 (13%) Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV--- 196 V + T + +++ V++ G +++ + + G Q +++ Sbjct: 135 IPVTVKCRIGISGKETLEDLCRFIECVRQAGVRRFIVH--ARIAILGGLSPAQNRQIPPL 192 Query: 197 ---------REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 +E + + +GG T+ + + DG + ++ E+ Sbjct: 193 RYAHVESLKKEFPDLLIEINGGIRTLAEMQDRLKTN--DGVMIGRAAYETPYLFSEV 247 Score = 41.0 bits (95), Expect = 0.035, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 21/126 (16%) Query: 13 RDGQV-----VK---GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG------ 58 DG V VK G+ + + D+ + + G + + A G Sbjct: 129 MDGNVSIPVTVKCRIGISGKET--LEDLCRFIECVRQAGVRRFIVHARIAILGGLSPAQN 186 Query: 59 ---RVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 + + V + + D+ + GGI++L + L D + I A P L + Sbjct: 187 RQIPPLRYAHVESLKKEFPDLLIEINGGIRTLAEMQDRLKTN-DGVMIGRAAYETPYLFS 245 Query: 115 RLADRF 120 + F Sbjct: 246 EVDSLF 251 >UniRef50_Q0CMD2 TRNA-dihydrouridine synthase 1 n=18 Tax=Leotiomyceta RepID=Q0CMD2_ASPTN Length = 536 Score = 44.8 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 76/218 (34%), Gaps = 41/218 (18%) Query: 36 AKRYAEE-GADELVFYDITASSDGRVVDKSWVS---RVAEVIDIPFCVAGGIKSLEDAAK 91 A+ + E+ + F+ T ++ G+ D ++ + + + FC LE A Sbjct: 79 ARLFREQLSFRQQHFHP-TRAAVGKDDDAPYLDGNPAIDRPLFVQFCANNPDDFLEAAQH 137 Query: 92 I--------LSFGA-----DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 + L+ G + S D LI +L ++ + + Sbjct: 138 VAPYCDAVDLNLGCPQGIAKRGHYGSFLQEDWDLIYKLINKLHTELPIP----------- 186 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNGY-DLEQLKK 195 + R ++ +TL++ + + GA I L+ ++ G G D ++ Sbjct: 187 -------VTAKFRILESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGVADWSYIRY 239 Query: 196 VR-EVCHVPLI-ASGGAGTMEHFLEAFRDADVDGALAA 231 +R + +I A+G + DG ++A Sbjct: 240 LRDNLPPETVIFANGNNLNHDDLERCLEATGADGVMSA 277 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IP 76 +FR E + AK GA + + T G D S++ + + + Sbjct: 190 KFRILESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGVADWSYIRYLRDNLPPETV 249 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITR 115 G + +D + L GAD + L+DP + ++ Sbjct: 250 IFANGNNLNHDDLERCLEATGADGVMSAEGNLSDPAIFSK 289 >UniRef50_P20839 Inosine-5'-monophosphate dehydrogenase 1 n=225 Tax=cellular organisms RepID=IMDH1_HUMAN Length = 514 Score = 44.8 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 2/67 (2%) Query: 169 RGAGEIVLN-MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 G G I + + G G + ++ + VP+IA GG T+ H ++A Sbjct: 325 MGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKAL-ALGAST 383 Query: 228 ALAASVF 234 + S+ Sbjct: 384 VMMGSLL 390 Score = 41.4 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 38/113 (33%), Gaps = 23/113 (20%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD------ 57 K+ P L V G VV Q AK + G D L S Sbjct: 291 KQKYPHLQVIGGNVVTAAQ-------------AKNLIDAGVDGLRVGMGCGSICITQEVM 337 Query: 58 --GRVVDKSW--VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 GR + V+ A +P GGI+++ K L+ GA + + S Sbjct: 338 ACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGASTVMMGSLL 390 >UniRef50_Q814I1 GMP reductase n=106 Tax=Bacteria RepID=GUAC_BACCR Length = 328 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 38/140 (27%), Gaps = 12/140 (8%) Query: 34 PLAKRYAEEGADELVF------YDITASSDGRVV---DKSWVSRVAEVIDIPFCVAGGIK 84 + GAD IT G + + A+ P GGI+ Sbjct: 153 EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIR 212 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + D AK + FGA + I S +R G + K +V Sbjct: 213 THGDVAKSIRFGATMVMIGSLFAGHEESPGETIERDGKLYKEYFGSASEFQKGEKKNVEG 272 Query: 145 ---YTGDESRTRVTQWETLD 161 + + T E Sbjct: 273 KKMFVEHKGSLEDTLIEMEQ 292 Score = 41.8 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 G G++ + + G+ L L+ + P+IA GG T ++ R + Sbjct: 171 GPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTHGDVAKSIR-FGATMVM 229 Query: 230 AASVFHKQIINIGELKA 246 S+F + GE Sbjct: 230 IGSLFAGHEESPGETIE 246 >UniRef50_D2UY23 Inosine-5-monophosphate dehydrogenase n=1 Tax=Naegleria gruberi RepID=D2UY23_NAEGR Length = 346 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 54/217 (24%), Gaps = 38/217 (17%) Query: 24 RNHEIIGDIVPLAKRYAEEG-ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 +IGD LA G WV + V+ G Sbjct: 51 NMDTVIGD--ELADVLIANGGIPLFH------RFTSFEKQSEWVKKYENNCF----VSCG 98 Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + +E K+L GA + I+ +A + + Sbjct: 99 LNDMESTVKLLELGAKGVVID------------IAHGHSDAMCTFIRNLKKQLPHKEIIA 146 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAG-EIVLNMMNQDGVRNG-YDLEQLK---KVR 197 + + + K G G + G +K ++ Sbjct: 147 GNVCTPMGYQ-----DLVTAGADAVKVGVGCGAACT--TRIKTGFGLPQFSAIKNCAELA 199 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 VP+IA GG + A A + S+F Sbjct: 200 RKLRVPIIADGGIVFERDMVLAL-AAGASTVMMGSIF 235 >UniRef50_A4FBL7 Dihydroorotate dehydrogenase n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FBL7_SACEN Length = 338 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 59 RVVDKSWVSRVAEV-IDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 + + V+ + + + +P GGI++ +D + GAD +S+ S Sbjct: 257 KPIGLRVVAELRDAGVKLPIIATGGIRTFDDCREYFWAGADAVSLGSATW 306 Score = 41.0 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 188 YDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 L + ++R+ +P+IA+GG T + E F A D S Sbjct: 259 IGLRVVAELRDAGVKLPIIATGGIRTFDDCREYFW-AGADAVSLGSA 304 >UniRef50_B6W8L3 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W8L3_9FIRM Length = 74 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD---RFG 121 V +V++ ++IP GGI S +DA + + GA + + + +P + D ++ Sbjct: 1 MVHQVSKAVNIPIMGMGGITSWQDALEFIMAGASIVQVGTATFMNPKKSLEIIDGLNKYV 60 Query: 122 VQCIVVGID 130 + +V D Sbjct: 61 NENMVSIKD 69 >UniRef50_B0XNW3 Dihydrouridine synthase family protein, putative n=4 Tax=Trichocomaceae RepID=B0XNW3_ASPFC Length = 541 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 5/91 (5%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNG-YDLEQLKKVR-EVCH 201 + R + ++ +TL++ + + GA I L+ ++ G G D ++ +R + Sbjct: 195 VTAKFRIQESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGLADWSYIRYLRDNLPP 254 Query: 202 VPLI-ASGGAGTMEHFLEAFRDADVDGALAA 231 +I A+G + DG ++A Sbjct: 255 ETVIFANGNNLNHDDLERCLEATGADGVMSA 285 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IP 76 +FR E + AK GA + + T G D S++ + + + Sbjct: 198 KFRIQESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGLADWSYIRYLRDNLPPETV 257 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITR 115 G + +D + L GAD + L+DP + ++ Sbjct: 258 IFANGNNLNHDDLERCLEATGADGVMSAEGNLSDPAIFSK 297 >UniRef50_Q9HJH3 Geranylgeranylglyceryl phosphate synthase n=4 Tax=Thermoplasmatales RepID=GGGPS_THEAC Length = 253 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 45/120 (37%), Gaps = 7/120 (5%) Query: 2 LAKRIIP-CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEE----GADELVFYDITASS 56 + IP V D + G + H I D A YA G + F + S Sbjct: 120 MKIEKIPMAYLVFDPGMTVGRVGKAHLIPRDDEKTALSYALAAQYFGFRLVYFEAGSGSP 179 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + V RV + +DIP V GGI++ E A + GAD I + A + L Sbjct: 180 YHVGEN--VVRRVKQELDIPVIVGGGIRTPEAAKALAQAGADMIVTGTIAERSVNVYEAL 237 >UniRef50_Q9SA34 Probable inosine-5'-monophosphate dehydrogenase n=12 Tax=core eudicotyledons RepID=IMDH2_ARATH Length = 502 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 47/160 (29%), Gaps = 35/160 (21%) Query: 85 SLEDAAKILSFGADKISINSP---ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 E ++ GA+ + ++S ++ +I + + + +V Sbjct: 246 DKERLEHLVKAGANVVVLDSSQGNSIYQLEMIKYVKNTYPELDVV--------------- 290 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQK-----RGAGEIVLNMMNQDGVRNGYDLEQLK-- 194 VT ++ + ++ G+G I V G K Sbjct: 291 --------GGNVVTMYQAENLIKAGVDGLRVGMGSGSI-CTTQEVCAVGRGQATAVYKVS 341 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + VP+IA GG H ++A + S Sbjct: 342 TLAAQHGVPVIADGGISNSGHIVKALV-LGASTVMMGSFL 380 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 39/116 (33%), Gaps = 25/116 (21%) Query: 1 MLA--KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD- 57 M+ K P LDV G VV Q A+ + G D L + S Sbjct: 276 MIKYVKNTYPELDVVGGNVVTMYQ-------------AENLIKAGVDGLRVGMGSGSICT 322 Query: 58 -------GRVVDKSW--VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 GR + VS +A +P GGI + K L GA + + S Sbjct: 323 TQEVCAVGRGQATAVYKVSTLAAQHGVPVIADGGISNSGHIVKALVLGASTVMMGS 378 >UniRef50_A5IK84 Dihydroorotate dehydrogenase n=10 Tax=Thermotogaceae RepID=PYRD_THEP1 Length = 270 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 59 RVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + V V + + +GG+ S++DA + L GAD I + S DP ++ + Sbjct: 203 KPIALRAVYEVKKRFPELFVIASGGVYSVKDAEEFLKVGADVIGVGSALFKDPGVVEEI 261 Score = 41.4 bits (96), Expect = 0.027, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 55/176 (31%), Gaps = 37/176 (21%) Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 GG+ +++A + +N+ P L + GV+ I V + +TG Sbjct: 123 GGLSIVKNAEEWKKL------LNTLRKELPDSF--LIAKVGVEGIFVEDAAEFVMKTGWD 174 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK-----K 195 + L G +G L+ + + Sbjct: 175 GITLVNTVRGLHFEKDTMIL----------------------GGLSGPVLKPIALRAVYE 212 Query: 196 VREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 V++ + +IASGG +++ E + D S K + E+ YL Sbjct: 213 VKKRFPELFVIASGGVYSVKDAEEFLK-VGADVIGVGSALFKDPGVVEEIGKYLLE 267 >UniRef50_B2V534 Dihydrouridine synthase family protein n=29 Tax=Clostridiales RepID=B2V534_CLOBA Length = 321 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 53/157 (33%), Gaps = 16/157 (10%) Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 L+ G ++ S L R + + + ++ + + K + G Sbjct: 90 LNLGCPAGTVVSKNRGSGFLAKR-------EELDIFLEEIFKIDDMKISIKTRIG----- 137 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 + + E + ++ K E++++ +D N +L+ K + + P+ +G Sbjct: 138 KDSPEEFYELIKIYNKYPLEELIIHPRTQKDFYGNKPNLDVFKDALSLSNNPVCYNGDIF 197 Query: 212 TMEHFLEAFRDA--DVDGALAASVFHKQIINIGELKA 246 T+ F + V + + E+K Sbjct: 198 TVAD-HNKFEETFPKVKTLMLGRGILANPGLMNEIKN 233 >UniRef50_B2WJB5 L-lactate dehydrogenase n=2 Tax=Pleosporineae RepID=B2WJB5_PYRTR Length = 401 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 7/82 (8%) Query: 33 VPLAKRYAEEGADELVFYD-----ITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKS 85 A G D +V + + + V+ V +P V GGI+ Sbjct: 266 AEDALLACHHGVDGIVVSNHGGRQLNGALATIDALPEVVAAVRSHTGKKVPVHVDGGIRH 325 Query: 86 LEDAAKILSFGADKISINSPAL 107 D K L+ GAD + + P L Sbjct: 326 GTDIFKALALGADFVWVGRPVL 347 >UniRef50_C8S5Y9 Photosystem I assembly BtpA n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S5Y9_FERPL Length = 249 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 76/238 (31%), Gaps = 35/238 (14%) Query: 29 IGDIVPLAKRYAEEGADELVFYDIT-------ASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 I V A GAD ++ + A + V V + IP V Sbjct: 25 IDHAVRNAILIENCGADAIIIENFNDKPFFMKAPPETIASMSVIVREVIREVSIPVGVN- 83 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLA------DRFGVQCIVVGIDTWYDA 135 + + G ++I A A + ++ + F + I + + Sbjct: 84 ---------VLRNDGVAALAIAKAAGAKFVRVNQMIFPAAMPEGF-AKPIAAKMARYKRL 133 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 + + ++ + E D+V + + +++ + L+K Sbjct: 134 LNCDAKIFADISVKHSVQLAKIE--DFVDNIDRAYCDAVIVTG---KKTGKPPEASTLRK 188 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ-IINIGELKAYLATQG 252 ++E+ VP+I GA E R + DG + + + + +LK ++ Sbjct: 189 IKELVDVPVILGSGAT-----PENLRKYEADGVIVGTYVKEGEEYSCEKLKRVVSEAK 241 >UniRef50_B1LIF1 Fructose-bisphosphate aldolase, class II n=56 Tax=Bacteria RepID=B1LIF1_ECOSM Length = 286 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 75/210 (35%), Gaps = 11/210 (5%) Query: 47 LVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV--AGGIKSLEDAAKILSFGADKISINS 104 + A G V R A+ +D+P + G K+ ED + + G + I+ Sbjct: 47 IQIAPTNAQLSGYDYIYEIVKRHADKMDVPVSLHLDHG-KTQEDVKQAVRAGFTSVMIDG 105 Query: 105 PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 A + I F + + E + D + E Sbjct: 106 AAFSFEENIA-----FTQEAVDFCKSYGVPVEAELGAILGKEDDHVSEADCKTEPEKVKT 160 Query: 165 EVQKRGAGEIVLNMMNQDGVRN--GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 V++ G + +++ N G+ + D+ LK++ EV VPL+ GG+G L +F + Sbjct: 161 FVERTGCDMLAVSIGNVHGLDDIPRIDIPLLKRIAEVSPVPLVIHGGSGIAPEILRSFVN 220 Query: 223 ADVDGALAASVFHKQIINIGELKAYLATQG 252 V AS ++ KAY+ Sbjct: 221 YRVAKVNIASDL-RKAFITAVGKAYVNNHN 249 >UniRef50_C7PJE8 2-nitropropane dioxygenase NPD n=3 Tax=Bacteroidetes RepID=C7PJE8_CHIPD Length = 360 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%) Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++ +RE P+IA+GG + A D + F Sbjct: 205 LVQLIREKVKTPVIAAGGIANGKGIAAAL-TLGADAVQIGTAFL 247 Score = 42.5 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 10/88 (11%) Query: 34 PLAKRYAEEGADELVFYD----------ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 A G D +V + ++ V + E + P AGGI Sbjct: 164 DEAIALEAAGVDLIVASGFESGGHRPSFLQSAEASTTGTFVLVQLIREKVKTPVIAAGGI 223 Query: 84 KSLEDAAKILSFGADKISINSPALADPT 111 + + A L+ GAD + I + LA Sbjct: 224 ANGKGIAAALTLGADAVQIGTAFLACEE 251 >UniRef50_Q15VZ0 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15VZ0_PSEA6 Length = 364 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 40/130 (30%), Gaps = 25/130 (19%) Query: 9 CLDV------RDGQVVKG--VQFRNHEIIGDI----VPLAKRYAEEGADELVFY------ 50 +DV R+ V+ D V AK + +GA L Sbjct: 207 VIDVIAQEIPRNNIGVRLSPTGGPGGSYDDDPEGTYVAAAKAVSGKGAVYLHVVRPNNHT 266 Query: 51 -DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALA 108 D + G + + F G S ++A + AD ++ LA Sbjct: 267 GDGSGIEQGN----QLLKDMRAAFSGVFIANGEF-SPQEADTWIENNDADAVAFGRSFLA 321 Query: 109 DPTLITRLAD 118 +P L R+A Sbjct: 322 NPDLPARIAK 331 >UniRef50_P32370 NADH-dependent flavin oxidoreductase n=4 Tax=Clostridium RepID=BAIH_EUBSP Length = 661 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 18/113 (15%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADEL------------VFYDITASSDGRVVDKSWV 66 + V + E D++ LA ++ G L + R V+ Sbjct: 228 RMVGGNSLE---DMLYLAPKFEAAGVSMLEVSGGTQYEGLEHIIPCQ--NKSRGVNVYEA 282 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLAD 118 S + +V+ IP G I + AA+I+ G D +++ P LADP L + + Sbjct: 283 SEIKKVVGIPVYAVGKINDIRYAAEIVERGLVDGVAMGRPLLADPDLCKKAVE 335 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/193 (9%), Positives = 54/193 (27%), Gaps = 12/193 (6%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + + G SL A + G+ + + + + RF ++ Sbjct: 145 DIIKQFGQAARRAEEAGCGAISLHCAHAYMLPGSFLSPLRNKRMDEYGGSLDNRARFVIE 204 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI--------- 174 I + + + + + L + + G + Sbjct: 205 MI--EEARRNVSPDFPIFLRISGDERMVGGNSLEDMLYLAPKFEAAGVSMLEVSGGTQYE 262 Query: 175 -VLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + +++ G ++ + ++++V +P+ A G + + E VDG Sbjct: 263 GLEHIIPCQNKSRGVNVYEASEIKKVVGIPVYAVGKINDIRYAAEIVERGLVDGVAMGRP 322 Query: 234 FHKQIINIGELKA 246 + Sbjct: 323 LLADPDLCKKAVE 335 >UniRef50_Q893R4 Regulatory protein tenI n=1 Tax=Clostridium tetani RepID=Q893R4_CLOTE Length = 204 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 8/93 (8%) Query: 33 VPLAKRYAEEGADEL---VFYD--ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 + A + GAD + Y+ GR + + +++ + IP GGI + E Sbjct: 110 LNEAVEAEKLGADYILAGHIYETKCKEGLKGRGQNF--IKSISQKVSIPIIAIGGI-TEE 166 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRF 120 + A ++ GA I+I S A+ P+ I L F Sbjct: 167 NTANVIKSGAKGIAIMSSAMKKPSTILTLKKEF 199 >UniRef50_B8FFK8 Fructose-bisphosphate aldolase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FFK8_DESAA Length = 282 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 9/165 (5%) Query: 66 VSRVAEVIDIPFCV--AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + + +P C+ G K ++ + ++ G + I++ A D L ++ + Sbjct: 66 IRTLCQDSTVPVCLHLDHG-KEVQTCLRAVAAGFTSVMIDASAF-DLDLNRKMTRQ--TA 121 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 +AE G N+ + + + ++ G + +++ G Sbjct: 122 QAARQAGVSVEAEIGHVGANKNSMEGKAEESNLTDPDQAAFFARETGVDALAVSIGTLHG 181 Query: 184 VRNG---YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 G D E+L + E VPL+ GG+GT E L + Sbjct: 182 TYKGEPRIDFERLAAINEAVDVPLVLHGGSGTGEDNLRRCVAGGI 226 >UniRef50_Q2NEH7 Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NEH7_METST Length = 242 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 4/79 (5%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 D + + K D + + A++ G + D + V+ +I + + +D Sbjct: 159 DTLEITKLIESYNIDYIH---LDATNPGIMEADYEIIEEVSNNTEIHLIGNNSVTTHDDY 215 Query: 90 AKILSFGADKISINSPALA 108 K+++ GAD +S+ AL Sbjct: 216 MKMINSGADSVSVARAALN 234 >UniRef50_Q6C002 YALI0F29205p n=1 Tax=Yarrowia lipolytica RepID=Q6C002_YARLI Length = 394 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 58/196 (29%), Gaps = 15/196 (7%) Query: 50 YDITASSDGRVVDKS--WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 D T S G+ + + R +E G + E A A ++ Sbjct: 57 VDFTVSQQGKGNTEKKAIIFRTSEAERDKIIFQVGSANPEIAVAACKMVAKDVAGIDLNC 116 Query: 108 ADPTLITRLADRFG------VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 P + + G +V ++ ++V+ T+ +TL+ Sbjct: 117 GCPKHFS-MHAGMGAALLKTPDKLVAILEALVKEVGEPFNVSISVKIRLL--ETEEKTLE 173 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGY----DLEQLKKVREVCHVPLIASGGAGTMEHFL 217 V + + G + ++ L ++ +V + + +G Sbjct: 174 LVDRLAQTGVKNLTIHCRTTPMRPREPVIRDTLAKVAEVCHKHGITCLVNGDVEGRHELA 233 Query: 218 EAFRDADVDGALAASV 233 + +DGA+ A Sbjct: 234 DLQEKYGIDGAMIARA 249 >UniRef50_D1N9H4 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9H4_9BACT Length = 360 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 11/93 (11%) Query: 35 LAKRYAEEGADELVF---YDITASSDGRVVD-------KSWVSRVAEVIDIPFCVAGGIK 84 + + E G D + + G + + + ++ IDIP + GG Sbjct: 235 VCEELQERGVDAIELSGGIPASRPGFGSLRNAGEPPYYREIARKIRNRIDIPVILVGGFT 294 Query: 85 SLEDAAKILSFGA-DKISINSPALADPTLITRL 116 E L G D I+++ P + +P LI R Sbjct: 295 RFETCNAALHDGCADLIALSRPLIREPELIERW 327 >UniRef50_B8DSF9 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSF9_DESVM Length = 372 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 45/106 (42%), Gaps = 16/106 (15%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITA--------SSDGRVVD-------KSWVSRVAEVI 73 + D++ A++ G + + TA + R+ + + R + Sbjct: 231 VDDMLEAARQAVAAGVEAVEMSGGTAMNPPNRMPARVTRIRNPEDEAWYREAARRFKAEV 290 Query: 74 DIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLAD 118 P + GGI++ + A +++ G D +S+ P + +P L+ R A+ Sbjct: 291 GAPLILVGGIRTPQVAQQLVDAGTVDMLSLCRPLIREPGLVRRWAE 336 >UniRef50_D2RCD8 Thiazole biosynthesis protein ThiG n=2 Tax=Gardnerella vaginalis RepID=D2RCD8_GARVA Length = 270 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 10/91 (10%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDG------RVVDKSWVSRVAEVIDIPFCVAGGI 83 D + +A+R G + G + + + + +P + G+ Sbjct: 141 DDPI-VARRLVSLGVKA---VMPGGAPIGTGLGILNPQNIELIVQECKEAGVPVILDAGV 196 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLIT 114 + D K G + + S P + Sbjct: 197 GTASDVVKAFEIGCSGVLLASAVTRCPDPVK 227 Score = 42.1 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 6/76 (7%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGY----DLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + + G + + G G ++E + + + VP+I G GT + Sbjct: 145 VARRLVSLGVKAV-MPGGAPIGTGLGILNPQNIELIVQECKEAGVPVILDAGVGTASDVV 203 Query: 218 EAFRDADVDGALAASV 233 +AF + G L AS Sbjct: 204 KAF-EIGCSGVLLASA 218 >UniRef50_A3HW33 D-arabino 3-hexulose 6-phosphate formaldehyde lyase (Hps-1) n=3 Tax=Bacteria RepID=A3HW33_9SPHI Length = 235 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 8/97 (8%) Query: 28 IIGDIVPLAKRYAEEGADELVFY-------DITASSDGRVVDKSWVSRVAEVIDIPFCVA 80 + D++ AK + G D ++ + I AS + V +D+P Sbjct: 115 VSEDMISGAKFLEDLGCDYVIHHIGYDERRGIAASGKRMPSPLDQLREVVAAVDVPVQAV 174 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 GG+ SLE A + +GA + + +P D + Sbjct: 175 GGL-SLEQAIQCPQYGAPLVVLGAPLTIDADSFKTAS 210 >UniRef50_Q03DI2 Inosine-5'-monophosphate dehydrogenase n=4 Tax=Lactobacillales RepID=Q03DI2_PEDPA Length = 380 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 17/163 (10%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + E A ++ GAD I I++ ++ ++A+ + + + Sbjct: 123 TFERAQGLIDAGADAIVIDTAHGHSAGVLRKVAE-------------IREHFPKQTLIAG 169 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVP 203 TR +D V+ G G I + GV + V Sbjct: 170 NVATADGTRALFDAGVDVVK--VGIGPGSICTTRVVAGVGVPQITAIYDAANVAREYGKK 227 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +IA GG ++A D + S+ G + Sbjct: 228 IIADGGIKFSGDIVKALVAGG-DAVMLGSMLSGTDETPGSIIE 269 >UniRef50_C1I264 Enoate reductase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I264_9CLOT Length = 623 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 14/111 (12%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT---------ASSDGRVV-DKSWVSR 68 ++ G V +AK G L DI + + ++ Sbjct: 208 HLIRGGRELEEG--VKMAKFLENLGVSALHV-DIGCHACWQNAIPTIYQEPALHEKYIQA 264 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLAD 118 V E + IP G + E A +I+S G AD +++ LADP + + + Sbjct: 265 VKEEVSIPVIGHGKMGYPEVAERIVSKGIADFVALGHYLLADPEWVNNVKE 315 >UniRef50_A6TRV9 Ribulose-phosphate 3-epimerase n=2 Tax=Bacteria RepID=A6TRV9_ALKMQ Length = 220 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 63/197 (31%), Gaps = 11/197 (5%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVD-KSWVSRVAEVIDIPFCVAGGIKSLED-AAKIL 93 K+ E G D L + + + + +PF V I++ + A+ + Sbjct: 20 IKKVEEAGCDMLHIDVMDGHFVPNITLGPPIIKSLKNKTKLPFDVHLMIENPDQYIAQFV 79 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVV----GIDTWYDAETGKYHVNQYTGDE 149 GAD I+++S +L G++ V + + + Sbjct: 80 EAGADIITVHSETCIHLHRTIQLIKGCGIKAAVALNPSTPLVMIENVLEELDMVLLMTVN 139 Query: 150 SRTRVTQW--ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 + L+ + +++ + + DG G +LE +K++ E ++A Sbjct: 140 PGFGGQKLIPNMLEKIARLKRMIDERGLKIDIQVDG---GVNLENIKQIAEAGANIIVAG 196 Query: 208 GGAGTMEHFLEAFRDAD 224 E + Sbjct: 197 SAIFNSTDIPETVKRLK 213 >UniRef50_B3PIM3 Probable FMN oxidoreductase n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PIM3_CELJU Length = 447 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 38/131 (29%), Gaps = 17/131 (12%) Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADRFG 121 + + + +P V GG ++ L+ GA D I + P + DP + L + Sbjct: 301 LEYAKVIRQYARMPLMVTGGFRTRAAMEDALNSGAVDMIGLARPFVVDPQIARPLLNGDL 360 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + G L + + +G + + + Sbjct: 361 QTLPNMEAQLARKP--------YWIGPR--------SPLFLCRLINIQGQQGWFYHQLRR 404 Query: 182 DGVRNGYDLEQ 192 G DL Sbjct: 405 LGKGKAPDLSM 415 >UniRef50_D2RKZ8 2-nitropropane dioxygenase NPD n=10 Tax=Firmicutes RepID=D2RKZ8_ACIFE Length = 317 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 3/78 (3%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVR--NGYDLEQLKKVREVCHVPLIASGGAGTME 214 + ++ GA +V+ G + L ++ V +P+IA+GGA T + Sbjct: 122 VSYAKLAKIAERLGASAVVVEGTEAGGHLGTQRSIKDILPEILSVVKIPVIAAGGAVTGK 181 Query: 215 HFLEAFRDADVDGALAAS 232 E + G S Sbjct: 182 DAAELLK-MGASGVQMGS 198 Score = 40.2 bits (93), Expect = 0.074, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Query: 33 VPLAKRYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 LAK GA +V + K + + V+ IP AGG + +DAA Sbjct: 125 AKLAKIAERLGASAVVVEGTEAGGHLGTQRSIKDILPEILSVVKIPVIAAGGAVTGKDAA 184 Query: 91 KILSFGADKISINS 104 ++L GA + + S Sbjct: 185 ELLKMGASGVQMGS 198 >UniRef50_Q6GJZ4 NADH:flavin oxidoreductase/NADH oxidase family protein n=80 Tax=Firmicutes RepID=Q6GJZ4_STAAR Length = 404 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 GR V++ +A IP +GGI S E A L AD + ++SP + +P + Sbjct: 280 GEHFGRPVNQIVYEHLAGR--IPLIASGGINSPESALDALQ-HADMVGMSSPFVTEPDFV 336 Query: 114 TRLAD 118 +L++ Sbjct: 337 HKLSE 341 >UniRef50_Q8EAJ0 tRNA-dihydrouridine synthase A n=121 Tax=Bacteria RepID=DUSA_SHEON Length = 335 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 62/192 (32%), Gaps = 18/192 (9%) Query: 71 EVIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPALADPTLITR--LADRFGVQCIV 126 E + + G ++ A G D++++N +D R + + Sbjct: 65 EEHPLALQLGGSNPVELARCAKLAAERGYDEVNLNVGCPSDRVQNGRFGACLMAEPELVA 124 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 +D V G + + + ++ V +G GE +++ Sbjct: 125 ECVDAMKQVVDIPVTVKTRIGIDE--QDSYEFLTHFIDTVMAKGCGEFIIHARKAWLQGL 182 Query: 187 GY---------DLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 D +++ ++ R+ + + +GG ++E + DG + ++ Sbjct: 183 SPKENREIPPLDYDRVYQLKRDYPALNISINGGITSLEQAQTHLQHL--DGVMVGREAYQ 240 Query: 237 QIINIGELKAYL 248 + ++ L Sbjct: 241 NPYMLAQVDQVL 252 >UniRef50_Q3A5M1 NADH:flavin oxidoreductase, Old Yellow Enzyme family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5M1_PELCD Length = 365 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLI 113 + + + +++AE +D+P V GGI+S E K+L + S++ P LA+P L Sbjct: 270 APEKEAYNAGHAAQLAEELDVPILVVGGIRSPEVIEKLLETSKIEYFSVSRPLLAEPQLA 329 Query: 114 TRL 116 R Sbjct: 330 KRW 332 Score = 41.8 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 62/215 (28%), Gaps = 42/215 (19%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA-- 106 D+ + R + + + + + E A + + G D + +++ Sbjct: 123 VADLAFKVEPREMSREDIQTLKKAYG------------EAANRAKAAGFDGVQLHAAHGY 170 Query: 107 ----LADPTLITRLADRFGVQ-----CIVVGIDTWYDAETG---KYHVNQYTGDESRTRV 154 P R D +G IV+ I G + D + Sbjct: 171 LLNQFLCPYYNRR-TDEYGGSIENRARIVLEIYDEVRDRVGANYPVLIKLNAEDFTENGA 229 Query: 155 TQWETLDWVQEVQKRGAGEIVL--------------NMMNQDGVRNGYDLEQLKKVREVC 200 T + +E+ RG I + ++ + Y+ ++ E Sbjct: 230 TFEDCRYLCRELAGRGIDAIEVSCGTFASGKLGPCRTRIDA-PEKEAYNAGHAAQLAEEL 288 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 VP++ GG + E + + ++ + Sbjct: 289 DVPILVVGGIRSPEVIEKLLETSKIEYFSVSRPLL 323 >UniRef50_D1B5N0 Dihydroorotate dehydrogenase family protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5N0_THEAS Length = 316 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 8/75 (10%) Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK-----QIINIGEL 244 L L ++ VPL+A GG + + L+A A + + I + + Sbjct: 236 LRLLFQLYPKVSVPLVACGGICSPQDALKAM-MAGASAVQVGTQLFRDLGCCGEI-LEGI 293 Query: 245 KAYLATQGVEI-RIC 258 +++L ++G+ + R+ Sbjct: 294 RSFLDSRGLSVSRLV 308 Score = 41.0 bits (95), Expect = 0.039, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 3/80 (3%) Query: 41 EEGADEL--VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD 98 E GA V ++ + + + ++ + +P GGI S +DA K + GA Sbjct: 213 EAGAPVFKRVVAGLSGPAV-LPLTLRLLFQLYPKVSVPLVACGGICSPQDALKAMMAGAS 271 Query: 99 KISINSPALADPTLITRLAD 118 + + + D + + Sbjct: 272 AVQVGTQLFRDLGCCGEILE 291 >UniRef50_D2S4B7 (S)-2-hydroxy-acid oxidase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S4B7_9ACTO Length = 427 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 4/93 (4%) Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCH--VPL 204 V T +EV + GA +V++ + R+ L+ L +R P+ Sbjct: 281 WRGDLLVKGITTPASAREVMEHGADGVVVSNHGGRQLDRSAATLDVLPAIRSAVGQQAPV 340 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + GG + + A R D + + Sbjct: 341 LIDGGVLHGQDVVAA-RALGADAVMIGRAYLYG 372 >UniRef50_C4SJL7 Dioxygenases to 2-nitropropane dioxygenase n=1 Tax=Yersinia frederiksenii ATCC 33641 RepID=C4SJL7_YERFR Length = 276 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 15/168 (8%) Query: 79 VAGGI-KSLEDAAKIL---------SFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 V GGI K+ ED + + F + + L + + I + Sbjct: 13 VGGGIAKTTEDFRQEIIKTRTLTDKPFAVNYLLPIEGVEISFQYAEPLLEVILQEKINIV 72 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWET-LDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 I + D G+ ++ + ++ +K G I++ G + Sbjct: 73 ITSGKDITKGERYIRSLKDAGIIVIHREISPTVENSIRAEKMGVDAIIITGHEAGGHLSE 132 Query: 188 Y---DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + L L +V +V +P+IA+GG + +A G + Sbjct: 133 HRISTLALLPQVTDVVKIPVIAAGGIYNQK-TAKAATAMGATGVYVGT 179 >UniRef50_Q46QV8 2-nitropropane dioxygenase, NPD n=16 Tax=cellular organisms RepID=Q46QV8_RALEJ Length = 376 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 11/107 (10%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRN-----GYD-----LEQLKKVREVCHVPLIASGG 209 L+ ++++ G IV + G R GYD L ++ + +P+IA+GG Sbjct: 167 LEEARQIEAAGIDAIVAQGIEAGGHRGVFDPAGYDEGLGTLALVRILVRHTRLPVIAAGG 226 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 A + F + + A +R Sbjct: 227 IMDGAGIAAVL-ALGAQAAQLGTAFVGCEESSADAAYRAAFSAQPVR 272 Score = 42.1 bits (98), Expect = 0.017, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 12/96 (12%) Query: 33 VPLAKRYAEEGADELV-----------FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + A++ G D +V +D +G + V + +P AG Sbjct: 167 LEEARQIEAAGIDAIVAQGIEAGGHRGVFDPAGYDEGLGT-LALVRILVRHTRLPVIAAG 225 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 GI A +L+ GA + + + A Sbjct: 226 GIMDGAGIAAVLALGAQAAQLGTAFVGCEESSADAA 261 >UniRef50_B7J4N8 tRNA-dihydrouridine synthase A n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J4N8_ACIF2 Length = 330 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 51/165 (30%), Gaps = 27/165 (16%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 K S + + P L+ L G + V + + + + Sbjct: 112 VQKGSFGACLMTTPDLVAELVAAMGESGLPVSVKHRLGLDREEDYAA------------- 158 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD---------LEQLKKV-REVCHVPLIA 206 +V+ V G +++ N + + ++ R++ H+ + Sbjct: 159 --LRAFVETVATAGCRHFIVHARNAWLKGLSPAENRDVPPLRWDWVHQLKRDLPHLTIEI 216 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +GG + F VDG + + + + E++ L + Sbjct: 217 NGGFNDLAAVTAQFSA--VDGVMLGRAAYHHPLLLAEIERALGRR 259 >UniRef50_A0M3J4 2-nitropropane dioxygenase family protein n=73 Tax=cellular organisms RepID=A0M3J4_GRAFK Length = 315 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 8/142 (5%) Query: 35 LAKRYAEEGADELVFYDIT-ASSDGRV--VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 A + E G D +V +GR + + V E I IP AGGI + Sbjct: 124 FAIKSEEAGVDAVVAEGFEAGGHNGRDETTTFTLIPMVKEKISIPLIAAGGIATGSGMLA 183 Query: 92 ILSFGADKISINSPALADPTL-----ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + GAD + I S +A P + V+ + K + Sbjct: 184 AMVLGADAVQIGSRFVATPEASSHKNFKEMVVNAKEGDTVLTLKELAPVRLLKNKFYKDV 243 Query: 147 GDESRTRVTQWETLDWVQEVQK 168 D ++ + ++ + + Sbjct: 244 QDLYLKTPSKEDLIELLGRARA 265 >UniRef50_Q11PE3 NADH:flavin oxidoreductase family protein n=10 Tax=Bacteria RepID=Q11PE3_CYTH3 Length = 362 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 3/83 (3%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 LA + G D + D ++ V S ++ + GG A + + Sbjct: 251 LALALNDLGIDYIHVVD-HSAIGAPAVPLSIKEKIRAGFSNTIILCGGF-DQAAAERAID 308 Query: 95 FGA-DKISINSPALADPTLITRL 116 G + ++ P + +P L+ RL Sbjct: 309 TGLTNAVAFGRPFINNPDLVERL 331 >UniRef50_B0UE51 FMN-dependent alpha-hydroxy acid dehydrogenase n=95 Tax=cellular organisms RepID=B0UE51_METS4 Length = 391 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 13/115 (11%), Positives = 34/115 (29%), Gaps = 7/115 (6%) Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 D + + K +++ G + E + GA ++++ + Sbjct: 232 AEQFDPTLNWDDVKRIQDRWGGPLILKGILDPEDAELAAR---SGAQALIVSNHGGRQLD 288 Query: 186 NGYD-LEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + L + E + ++ GG + + ++A G F Sbjct: 289 GAPSSITALPAIAEAVGSRIEVLMDGGIRSGQDVIKAL-ALGAKGVFIGRAFLYG 342 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 31 DIVPLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIPFCV--AGGIKSLE 87 D A+ A GA L+ + DG + + +AE + V GGI+S + Sbjct: 262 DP-EDAELAARSGAQALIVSNHGGRQLDGAPSSITALPAIAEAVGSRIEVLMDGGIRSGQ 320 Query: 88 DAAKILSFGADKISINSPALA 108 D K L+ GA + I L Sbjct: 321 DVIKALALGAKGVFIGRAFLY 341 >UniRef50_A1S6C3 2,4-dienoyl-CoA reductase n=3 Tax=Proteobacteria RepID=A1S6C3_SHEAM Length = 671 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 9/98 (9%) Query: 30 GDIVPLAKRYAEEGADEL------VFYDI--TASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 ++V LAK E G + I A+S R R+ + + IP Sbjct: 229 DEVVALAKGLEEAGVTIINTGIGWHEARIPTIATSVPRGAFAWVTERLKQEVHIPLIATN 288 Query: 82 GIKSLEDAAKILSFG-ADKISINSPALADPTLITRLAD 118 I + E A +IL+ G AD +S+ P LADP + + A Sbjct: 289 RINTPEIAEQILASGQADMVSMARPFLADPDFVNKAAA 326 >UniRef50_Q5XQ99 Glutamate synthase domain 2 n=2 Tax=environmental samples RepID=Q5XQ99_9ARCH Length = 490 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 42/153 (27%), Gaps = 21/153 (13%) Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 DK++ + + L + L F + D + K + T Sbjct: 257 DKVTPEVARMREAVLGSSLFSPFPFHSVYSVEDHKKHVDWIKEINPDVIVSVKVSTPTDV 316 Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE----------QLKKVREVCH------ 201 + + I+ + G D+ + KV E Sbjct: 317 DMVAVGSYYAGAN---IIHLDGSYGGTGAAPDIAKKNIAMPIEYAIPKVHEFLKGEGIRD 373 Query: 202 -VPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + LIASGG T +A DG + + Sbjct: 374 KMTLIASGGIRTAHDAAKAI-ALGADGVVIGTA 405 >UniRef50_A2QA98 Similarity to hypothetical protein SPBC36B7.04 - Schizosaccharomyces pombe n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QA98_ASPNC Length = 466 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNG-YDLEQLKKVR-EVCH 201 + R + T+ +TL++ + + GA I ++ ++ G G D ++ +R + Sbjct: 175 VTAKFRIQETKEKTLEYAKMILSAGANIITVHGRRREQKGHNTGLADWSYIRYLRDNLPP 234 Query: 202 VPLI-ASGGAGTMEHFLEAFRDADVDGALAA 231 +I A+G E + DG ++A Sbjct: 235 ETVIFANGNNLNYEDLDRCLEETGADGVMSA 265 >UniRef50_A3N1J3 NADPH dehydrogenase n=18 Tax=Bacteria RepID=A3N1J3_ACTP2 Length = 353 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 9/90 (10%) Query: 33 VPLAKRYAEEGADELVF-YDITASSD-------GRVVDKSWVSRVAEVIDIPFCVAGGIK 84 V +A+R+A GAD + V + +P G + Sbjct: 237 VEMARRFAAAGADCMHVSAGGDGVLAEGKHPPFNAGYQVYLARAVKQATGLPTIAVGMLD 296 Query: 85 SLEDAAKILSFG-ADKISINSPALADPTLI 113 +LS G AD +++ L DP + Sbjct: 297 DANVVDHVLSIGDADLVAVGRALLRDPQWV 326 >UniRef50_A4T8N9 2-nitropropane dioxygenase, NPD n=9 Tax=Mycobacterium RepID=A4T8N9_MYCGI Length = 340 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 45/146 (30%), Gaps = 15/146 (10%) Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 +++ P D ++ ++ VV + + + T V T Sbjct: 97 VAVGEPKFDDDDWAAKIEVLLDLRPAVVSFTFGLPSAEERRRLTG----AGITTVGTVTT 152 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL----------EQLKKVREVCHVPLIASGG 209 + + G + + + G R +D + + +V +P++A+GG Sbjct: 153 VAEARAAADVGVDVLTVQGPSAGGHRGTFDATARPSDIALDDLIARVTAAVGLPVVAAGG 212 Query: 210 AGTMEHFLEAFRDADVDGALAASVFH 235 RDA A + F Sbjct: 213 IMDAADIRRV-RDAGAVAAQLGTAFL 237 Score = 42.9 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 10/82 (12%) Query: 36 AKRYAEEGADELVFYDITA----------SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 A+ A+ G D L +A + + ++RV + +P AGGI Sbjct: 156 ARAAADVGVDVLTVQGPSAGGHRGTFDATARPSDIALDDLIARVTAAVGLPVVAAGGIMD 215 Query: 86 LEDAAKILSFGADKISINSPAL 107 D ++ GA + + L Sbjct: 216 AADIRRVRDAGAVAAQLGTAFL 237 >UniRef50_Q6CF62 YALI0B09999p n=1 Tax=Yarrowia lipolytica RepID=Q6CF62_YARLI Length = 344 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 55/194 (28%), Gaps = 28/194 (14%) Query: 66 VSRVAEVIDIP----FCVAGGIKSLE-----------DAAKILSFGADKISINSPALADP 110 + + + P V G+ E + + S S P Sbjct: 51 IEEIKKETSKPFGINLFVTKGVPDYESVVSSDKSILKAIETVYASADVSFSAPSYPSCVP 110 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 +L +V + ++ T + E + W ++ G Sbjct: 111 PFDKQLEAVLQNPPPIVSFTFGIISADQVEQLHAKNIIVIGTATNREEAVSW----KQAG 166 Query: 171 AGEIVLNMMNQDG---VRNGYDLEQLKKVREV------CHVPLIASGGAGTMEHFLEAFR 221 A +VL G G + + L K+ E+ +P+I +GG T++ + Sbjct: 167 ADAVVLQGREAGGHRGTWIGPEKDSLFKLDELIEATKDVDIPIIPAGGVATIQRAKVLQQ 226 Query: 222 DADVDGALAASVFH 235 + V + Sbjct: 227 NPRVLAVTVGTALL 240 >UniRef50_P53759 tRNA-dihydrouridine synthase 1 n=19 Tax=Ascomycota RepID=DUS1_YEAST Length = 423 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 53/180 (29%), Gaps = 30/180 (16%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 D+ + DP + A +C V ++ K E + Sbjct: 85 VDRPLVVQFCANDPEYLLAAAKLVEDKCDAVDLNLGCPQGIAKKGHYGSFLMEEWDLIHN 144 Query: 157 W-----------------------ETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDL 190 ++L++ + V GA + ++ ++ + Sbjct: 145 LINTLHKNLKVPVTAKIRIFDDCEKSLNYAKMVLDAGAQFLTVHGRVREQKGQKTGLANW 204 Query: 191 EQLKKVREVCHVP--LIASGGAGTMEHFLEAFRDADVDGALA--ASVFHKQIINIGELKA 246 E +K +R+ A+G E D ++ ++++ + N+G+ K Sbjct: 205 ETIKYLRDNLPKETVFFANGNILYPEDISRCMEHIGADAVMSAEGNLYNPGVFNVGQTKN 264 Score = 42.1 bits (98), Expect = 0.018, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 6/87 (6%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIP--FCVAGGIKSLE 87 + AK + GA L + G+ + + + + + F G I E Sbjct: 171 LNYAKMVLDAGAQFLTVHGRVREQKGQKTGLANWETIKYLRDNLPKETVFFANGNILYPE 230 Query: 88 DAAKILS-FGADKISINSPALADPTLI 113 D ++ + GAD + L +P + Sbjct: 231 DISRCMEHIGADAVMSAEGNLYNPGVF 257 >UniRef50_A3JUQ7 FMN-dependent alpha-hydroxy acid dehydrogenase family protein n=4 Tax=Rhodobacterales RepID=A3JUQ7_9RHOB Length = 381 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 36/136 (26%), Gaps = 4/136 (2%) Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 + + G + +Y + + + V Sbjct: 201 LREGTVPRMRFFDDYVPTKGRESFTHAGALIRGIPDWQYLRDLRQEWDGKLIVKGVLRPT 260 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVC--HVPLIASGGAGTMEHFLE 218 + + G I ++ + G +EQL K+RE +PLI G + Sbjct: 261 DAKRIASEGVDCIWVSNHSGRQFEAGPAVIEQLPKIREAVGSDLPLIYDSGVVWGLDVMR 320 Query: 219 AFRDADVDGALAASVF 234 A D + F Sbjct: 321 ALAK-GADYVMVGRAF 335 >UniRef50_Q55710 Thiazole synthase n=253 Tax=cellular organisms RepID=THIOG_SYNY3 Length = 656 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 31 DIVPLAKRYAEEGADELVFYDITASS-DGRVV-DKSWVSRVAEVIDIPFCVAGGIKSLED 88 D + LAKR E G + + G+ + + + + + E +P V GI + + Sbjct: 536 DPL-LAKRLEEVGCA--TVMPLGSPIGSGQGIRNAANIGIIIENAKVPVVVDAGIGTPSE 592 Query: 89 AAKILSFGADKISINSPA 106 AA+ + GAD + INS Sbjct: 593 AAQAMEMGADAVLINSAI 610 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 3/74 (4%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + +++ G ++ + G G + + + E VP++ G GT +A Sbjct: 539 LAKRLEEVGCATVMPLG-SPIGSGQGIRNAANIGIIIENAKVPVVVDAGIGTPSEAAQAM 597 Query: 221 RDADVDGALAASVF 234 + D L S Sbjct: 598 -EMGADAVLINSAI 610 >UniRef50_C7LVH6 Glutamate synthase (Ferredoxin) n=3 Tax=Desulfovibrionales RepID=C7LVH6_DESBD Length = 1519 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 28/218 (12%), Positives = 63/218 (28%), Gaps = 47/218 (21%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA-------------- 80 +A A+ GA +I+ G + + + +P + Sbjct: 1023 IAVGVAKAGA---HIVNISGFEGGTGAAREHAK---KYVGLPVEIGVTQAHRGLVEAGLR 1076 Query: 81 --------GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 GG++S D K++ GAD++ + + AL I+ + V Sbjct: 1077 HQVELWCDGGVRSGADVVKLICLGADRVGVGTVALMGVGCIS-----CEQCHLDVCPRGI 1131 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG--AGEIVLNMMNQDGVRNGYDL 190 + + + E + + ++ G I+ G Sbjct: 1132 STQLRSVEEATKRGLKLFKPLQGEVEAENLARLLRAFGDQIRHIL----------AGLGE 1181 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 ++L + + + A G + + A +D Sbjct: 1182 KRLSDLVGRTDLLVQARG--RELTDLTDLLIPAPMDSV 1217 >UniRef50_C9L8L9 Thiamine-phosphate pyrophosphorylase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L8L9_RUMHA Length = 235 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 21/183 (11%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRL------ADRFG-------VQCIVVGIDTW 132 LE L G + + L+ + D++G I + +D Sbjct: 42 LEQIEDSLKGGVTLLQLREKNLSREEFLKEAQEVKKLTDKYGVPFIINDDVEIALQVDAA 101 Query: 133 YDAETGKYHVNQYTGDESRTRVTQW---ETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-- 187 K + T++ ++ ++ GA + + M + Sbjct: 102 GVHVGQKDMEAGEARQKLGADKILGVSCRTVEDAKKAEQMGADYLGVGAMFATSTKTEAE 161 Query: 188 -YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 E+L+ + + +P++A GG E + RD + G S + Q + Sbjct: 162 VITTERLRSICQAVAIPVVAIGGI--KEENITKLRDCGISGVAVISGIYAQKDIESACQR 219 Query: 247 YLA 249 +L Sbjct: 220 FLK 222 >UniRef50_C7Q1I4 FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q1I4_CATAD Length = 440 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 14/141 (9%), Positives = 37/141 (26%), Gaps = 16/141 (11%) Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 +S + D + ++D F +D G + T Sbjct: 227 VSFPNIGPPDQRSLEVMSDMFDGTVCWDDLDWIRRIWDGPIVLKG------------VTT 274 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCH--VPLIASGGAGTMEHF 216 ++ +E G ++++ + ++ L ++ + V ++ G + Sbjct: 275 VEQAREAVDHGLDAVIVSNHGGRQLDRLPATIDVLPEIADAVGDRVEVLVDSGFRSGGDI 334 Query: 217 LEAFRDADVDGALAASVFHKQ 237 A L Sbjct: 335 ATAL-ALGAKAVLVGRAHLYG 354 >UniRef50_Q53318 Conserved protein n=2 Tax=Methanothermobacter thermautotrophicus RepID=Q53318_METTH Length = 242 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 5/90 (5%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE-VIDIPF 77 V+ R + D V +A A+ G D + + A G D VS V+E D Sbjct: 140 SVKIRGNVPGADTVGVAGVLADLGVDYIH---LDAMKPGEDRADLELVSLVSEVKGDSIL 196 Query: 78 CVAGGIKSLEDAAKILSFGADKISINSPAL 107 ++ +E A +L+ GAD +S+ A+ Sbjct: 197 IGNNSVRDIESARAMLAAGADAVSVARAAI 226 >UniRef50_Q3AL94 Indole-3-glycerol phosphate synthase n=13 Tax=Cyanobacteria RepID=TRPC_SYNSC Length = 295 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 59/207 (28%), Gaps = 31/207 (14%) Query: 31 DIVPLAKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 D V +AK YA GA L D T G + V + +D+P + S Sbjct: 100 DPVAIAKAYASGGASCLSVLTDKTFFQGG----FDVLVEVRQAVDLPLLCKEFVLSPYQL 155 Query: 90 AKILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 + + GAD + + + L+D L + + A G+ +V D Sbjct: 156 FQARAAGADAVLLIAAILSDQDLRYLNKAAAALGLTVLVEVHDA---------TEMDRVL 206 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 + D E +L N + G V L++ Sbjct: 207 SIGGFPLIGINNRDLTSFETDLATTERLLVDFNDRLKQQG--------------VLLVSE 252 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVF 234 G + + A L Sbjct: 253 SGLFSRADLDRV-QAAGAGAVLVGEAL 278 >UniRef50_A8ZX83 Dihydrouridine synthase DuS n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX83_DESOH Length = 324 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 11/126 (8%) Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 I +DT G V G T + + + + E++++ Sbjct: 115 DRIAEFLDTVMSRMKGGLSVKIRLGWADTTELMGLLPV-----LHRYPLAELIVHPRTGI 169 Query: 183 GVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA---LAASVFHKQI 238 G DL ++V E +P++ +G T+ F A+ + Sbjct: 170 QRYEGTVDLAAFERVLENTGLPVMYNGDIQTVADF--AYLSGRFKAVDRWMIGRGALADP 227 Query: 239 INIGEL 244 + Sbjct: 228 FLPAAI 233 >UniRef50_P32382 NADH oxidase n=1 Tax=Thermoanaerobacter brockii RepID=NADO_THEBR Length = 651 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 35 LAKRYAEEGADELVFYD---------ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 +AK E G L + S + + +V++IP G I+ Sbjct: 242 IAKMLEEAGVHVLHVSAGIYESMPTLLEPSRFEQGWRVYLAEEIKKVVNIPVITVGVIRE 301 Query: 86 LEDAAKILSFG-ADKISINSPALADPTLITRLAD 118 E A KI++ G AD +++ +ADP + + Sbjct: 302 PEFAEKIIAEGRADFVAVGRGLIADPEWPKKAKE 335 >UniRef50_Q3B2I1 Dihydroorotate oxidase B, catalytic subunit n=12 Tax=Chlorobiaceae RepID=Q3B2I1_PELLD Length = 331 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 21/105 (20%) Query: 34 PLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVSRVAEV 72 +A + GAD + + +T G + V + V V Sbjct: 202 AIAIAAEKAGADSVSLINTLVGMAIDWKKRRPLLKNVTGGLSGPAIKPVALAKVWEVNNA 261 Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + IP GGI S +DA + L GA + I + P + ++A Sbjct: 262 VSIPIVGMGGIASFDDAMEFLVAGAGAVQIGTMNFVQPDIGEKIA 306 >UniRef50_C4IB41 Dihydroorotate dehydrogenase family protein n=4 Tax=Clostridiales RepID=C4IB41_CLOBU Length = 362 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 42/126 (33%), Gaps = 4/126 (3%) Query: 59 RVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPA-LADPTLITRL 116 + + + + ++ + + GGI S +D + L GA + + S A L L +L Sbjct: 212 KPMALALIHKIKKAVPECEIIGVGGISSADDIIEFLLAGASAVQMLSAAMLKGKDLYEKL 271 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + G ++ + K + E + + + +K + Sbjct: 272 IEELPKALKKHGFNSVEEVINEKLSI-GQVKYEPEYPLINKDKCTNCRLCEKA-CPYFAI 329 Query: 177 NMMNQD 182 ++ Sbjct: 330 TSIDNQ 335 >UniRef50_Q47X34 Oxidoreductase, FAD/FMN-binding n=9 Tax=Proteobacteria RepID=Q47X34_COLP3 Length = 399 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 46/164 (28%), Gaps = 11/164 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDIT---ASSD------GRVVDKSWVSRVAEV 72 Q D + + + + D + + + G + + V Sbjct: 228 QLEGGLSQEDALEVVRILDKTSIDLIELSGGSYFPGAKSSSDSASGGPYFVDFAIKARSV 287 Query: 73 IDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGID- 130 +IP V GG K+ E A +LS D + + + P L G + Sbjct: 288 TNIPLVVTGGFKTREQATNVLSSDTVDFVGLGRALILKPDLPKEWISGIGFIPHFPKFES 347 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + T Y + + L +Q + R I Sbjct: 348 PPHGGITAWYTMILTVIGNDKEIDVNLALLPAIQAYENRDKARI 391 >UniRef50_Q1GF08 L-lactate dehydrogenase (Cytochrome) n=10 Tax=Rhodobacteraceae RepID=Q1GF08_SILST Length = 389 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 1/71 (1%) Query: 36 AKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 A R GAD + + D + + +P + GI+ D + L+ Sbjct: 271 APRLEAAGADAIWISNHAGRQFDAAPAPIEVLEDIRAATTLPLILDSGIEGGLDILRALA 330 Query: 95 FGADKISINSP 105 GAD + + Sbjct: 331 LGADFVMLGRA 341 Score = 42.1 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 2/105 (1%) Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LE 191 A Y E V ++ GA I ++ +E Sbjct: 241 RTAPDWAYLEWLRDHWEGPLVVKGVLDACDAPRLEAAGADAIWISNHAGRQFDAAPAPIE 300 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 L+ +R +PLI G L A D + +H Sbjct: 301 VLEDIRAATTLPLILDSGIEGGLDILRAL-ALGADFVMLGRAWHY 344 >UniRef50_UPI000185BEDF putative enterobactin synthetase component F n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185BEDF Length = 890 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 10/79 (12%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 +GD L + +AE GAD L + + G + + +P V G ++ L Sbjct: 521 RYVGDPEDL-RSFAETGADSLTAVSVRGALLG---------ELDVDVPLPVIVGGNVRDL 570 Query: 87 EDAAKILSFGADKISINSP 105 DA+ G ++S Sbjct: 571 IDASHRARAGVHAGHLSSG 589 >UniRef50_Q1D6Y7 Oxidoreductase, FAD/FMN-binding n=2 Tax=Myxococcales RepID=Q1D6Y7_MYXXD Length = 361 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 3/91 (3%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSD--GRVVDKSW-VSRVAEVIDIPFCVAG 81 + + + +A+ EG D L A+ + R + + R A + VAG Sbjct: 226 RGLDLDESLEVARMLTREGVDILHLSLWKAAHNTLKRPDQHATPLFRQAVGTGVRIVVAG 285 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTL 112 +++ E+A L+ GAD +++ A+A+ Sbjct: 286 EVRTREEAEAQLARGADAVAVGRAAIANHDW 316 >UniRef50_B5WIG7 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Burkholderia sp. H160 RepID=B5WIG7_9BURK Length = 678 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 11/99 (11%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITAS----------SDGRVVDKSWVSRVAEVIDIPFC 78 + D+ +A G D L S S + RV +P Sbjct: 244 LEDMERIAPHLVAAGVDALHVSLGHGSTSFDKIVEPMSMPEGWRLPYARRVRAAAGVPVI 303 Query: 79 VAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 G I+ E A + G AD +++ P LADP ++ Sbjct: 304 AVGQIRWPETAEVAIRDGDADLVALGRPLLADPEWASKA 342 >UniRef50_P49572 Indole-3-glycerol phosphate synthase, chloroplastic n=39 Tax=cellular organisms RepID=TRPC_ARATH Length = 402 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 68/225 (30%), Gaps = 28/225 (12%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A+ Y + GA L G + + + + P + Sbjct: 201 DPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIR--SAGVKCPLLCKEFVVDPWQIY 258 Query: 91 KILSFGADKISINSPALADPT--LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD + + + LAD + ++ + + +V D + G Sbjct: 259 YARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDEREMGRVLGIEGIELVGI 318 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 +R+ T ++ + + E +++RE + ++ Sbjct: 319 NNRSLETFE---------------------VDISNTKKLLEGEHGRQIRER-DMIVVGES 356 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 G T + + A V L + + + A L + + Sbjct: 357 GLFTPDDI-AYVQAAGVKAVLVGESI-VKQNDPEKGIAGLFGRNI 399 >UniRef50_Q9KT00 tRNA-dihydrouridine synthase C n=75 Tax=Gammaproteobacteria RepID=DUSC_VIBCH Length = 323 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 3/147 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+A + GA I +N A ++ ++ + H+ Sbjct: 78 AENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQVVKACRDAVPAHIPVS 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ--LKKVREVCHVP 203 + + V V + A E+ ++ + G +++ + ++R+ C +P Sbjct: 138 AKIRLGWED-PEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHYIDQIRQKCSIP 196 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALA 230 LIA+G + VD + Sbjct: 197 LIANGEVWNYADGQACIQTTGVDSLMV 223 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 3/91 (3%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASS--DGRVVDKSWVSRVAEVIDIPFCVAGG 82 E D + A+ ADEL + T + + ++ ++ + IP G Sbjct: 143 GWEDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHYIDQIRQKCSIPLIANGE 202 Query: 83 IKSLEDAAKILS-FGADKISINSPALADPTL 112 + + D + G D + + AL P L Sbjct: 203 VWNYADGQACIQTTGVDSLMVCRGALNVPNL 233 >UniRef50_Q8I2U5 Inosine-5'-monophosphate dehydrogenase n=7 Tax=Aconoidasida RepID=Q8I2U5_PLAF7 Length = 510 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 64/229 (27%), Gaps = 35/229 (15%) Query: 8 PCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS----------D 57 P + + G VV Q AK + GAD L + S Sbjct: 278 PDIPIIGGNVVTSQQ-------------AKNLIDAGADVLRIGMGSGSICTTQDVCAVGR 324 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + VS+ A +I GGIK+ + K LS GAD + + + Sbjct: 325 AQGTAVYHVSKYAHTRNIKTIADGGIKNSGNIVKALSLGADFVMLGNLL----AATEESC 380 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL- 176 + + V + + +++ + E EI + Sbjct: 381 SEYYFENNVRLKIYRGMGSMEAMYNKGFN------SKSRYLVDERKNEYTDENIDEIKVS 434 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 ++ V G L + + + S G + D+ Sbjct: 435 QGVSASLVDKGSVLNLIPHLFKAVKHGFQ-SMGIRNIPELHSKLYSGDI 482 >UniRef50_Q4D174 Dihydrouridine synthase (Dus), putative n=2 Tax=Trypanosoma cruzi RepID=Q4D174_TRYCR Length = 548 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 3/85 (3%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI--DIPFCVAGGIKSLEDAA 90 + A+ + G L + T + + D + RV E + IP G + + ED Sbjct: 264 LKYAEMLRDTGIAVLCVHGRTRHNKRGIADMEKIRRVREHLRGSIPVIGNGNVLTFEDVR 323 Query: 91 KILSFG-ADKISINSPALADPTLIT 114 + +S D P L DP L Sbjct: 324 RNMSATMTDGYMCAEPLLWDPRLFA 348 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 54/163 (33%), Gaps = 11/163 (6%) Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 + G DA +L+ A + + A+ + R G + D Sbjct: 181 PLFVQFCGN-----DADTLLAA-ARHVEDDCEAVDVNLGCPQGIARRGHYGSFLMEDWDR 234 Query: 134 DAETG---KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 + + R TL + + ++ G + ++ + R D+ Sbjct: 235 VHNILHCLAVELRVPVTAKMRVFDDDALTLKYAEMLRDTGIAVLCVHGRTRHNKRGIADM 294 Query: 191 EQLKKVREVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 E++++VRE +P+I +G T E DG + A Sbjct: 295 EKIRRVREHLRGSIPVIGNGNVLTFEDVRRNMSATMTDGYMCA 337 >UniRef50_Q5SMC7 tRNA-dihydrouridine synthase n=3 Tax=Thermus RepID=Q5SMC7_THET8 Length = 342 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 46/151 (30%), Gaps = 25/151 (16%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 + L D + + G +A V G E + Sbjct: 104 GACLLLDLARVREILKAMG------------EAVRVPVTVKMRLGLEGKETYRGL--AQS 149 Query: 163 VQEVQKRGAGEIVLNMMNQDGVR-NGYDLE-------QLKKVR-EVCHVPLIASGGAGTM 213 V+ + + G V++ + + E + +++ + + + +GG ++ Sbjct: 150 VEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSL 209 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGEL 244 E L + VDG + ++ + E Sbjct: 210 EEALFHLKR--VDGVMLGRAVYEDPFVLEEA 238 >UniRef50_Q7NHC3 Glr2614 protein n=2 Tax=Cyanobacteria RepID=Q7NHC3_GLOVI Length = 243 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 44/188 (23%), Gaps = 21/188 (11%) Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + R+ + V +D+P AD +P D Sbjct: 37 LNGAVAVRIESPEHIRAVRARVDVPIVG-----------LWKRPYADSAVYITPTFGD-- 83 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ--EVQKR 169 + G + + R + + + Sbjct: 84 --AAAVAQSGADIVAIDATGRPRPGGESLAELIGRIHCELDRPVLADVATVAEGETAARL 141 Query: 170 GAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 GA +V + G L+ + + VP+ GG + E AF Sbjct: 142 GADIVVTTLCGYTEATLGTPLPALDLVGALAGRLTVPVWCEGGVQSPEQVALAFAR-GAR 200 Query: 227 GALAASVF 234 + + Sbjct: 201 AVVVGTAL 208 >UniRef50_Q0K0C9 2-Nitropropane dioxygenase n=54 Tax=cellular organisms RepID=Q0K0C9_RALEH Length = 374 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 11/82 (13%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYDLE----------QLKKVREVCHVPLIASGGAGT 212 ++++ G IV + G R +D + ++ + +P+IASGG Sbjct: 170 ARQIEAAGVDAIVAQGIEAGGHRGAFDTDGYDEGLGTLALVRLLVLGTKLPVIASGGIMD 229 Query: 213 MEHFLEAFRDADVDGALAASVF 234 + A + F Sbjct: 230 GAGIAAVL-ALGAEAAQLGTAF 250 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 10/92 (10%) Query: 36 AKRYAEEGADELVFYDIT-----ASSDGRVVD-----KSWVSRVAEVIDIPFCVAGGIKS 85 A++ G D +V I + D D + V + +P +GGI Sbjct: 170 ARQIEAAGVDAIVAQGIEAGGHRGAFDTDGYDEGLGTLALVRLLVLGTKLPVIASGGIMD 229 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLA 117 A +L+ GA+ + + +A P A Sbjct: 230 GAGIAAVLALGAEAAQLGTAFVACPESSADAA 261 >UniRef50_D2R4W3 Inosine-5'-monophosphate dehydrogenase n=9 Tax=Bacteria RepID=D2R4W3_9PLAN Length = 494 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 64/213 (30%), Gaps = 30/213 (14%) Query: 33 VPLA-KRYAEEGADELVFYD----ITASSDGRVVDKSWVSRVAEVID-----IPFCVAGG 82 + A K + ++L+ D +T R D + R + A G Sbjct: 168 LEQAEKILTAKKVEKLLLVDDSYCLTGMITIR--DIDMMKRFPHACKDKMGRLRVGAAVG 225 Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + L+ A ++L+ G D + ++S +I + + + D G Sbjct: 226 VHDLQRAERLLAEGVDILVVDSAHGHSANVIATVKE--------IKKKWDIDVVAGNVAT 277 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM-MNQDGVRNGYDLEQLKKVREVCH 201 + D + G G I ++ GV + + + Sbjct: 278 REGCRDLIAAGADAVKV--------GIGPGSICTTRVISGVGVPQITAIYEAAQAARPSG 329 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 P+IA GG +A A + +F Sbjct: 330 TPIIADGGIRFSGDMTKAL-AAGAHCVMIGGLF 361 >UniRef50_Q9YBU2 Inosine-5'-monophosphate dehydrogenase n=1 Tax=Aeropyrum pernix RepID=Q9YBU2_AERPE Length = 433 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 43/160 (26%), Gaps = 30/160 (18%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 L+ A + GAD + I+ L + ++ L+ I V V Sbjct: 184 DLDRARLLEKSGADFLVIDVAHLHNRNALSSLSRLVKEVSIDV--------------VAG 229 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC---- 200 G T + + G + G G + L V Sbjct: 230 NLGTREGVLDTLARAEEVAG--LRMGISSG---SICSTGEVAGAAVPTLTAVMNAVLALE 284 Query: 201 ------HVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +P+IA GG +A A + +F Sbjct: 285 ELGLAGRIPIIADGGVRNAGDAAKAII-AGASAVMGGRLF 323 >UniRef50_Q4JVZ5 Thiazole synthase n=91 Tax=Bacteria RepID=THIG_CORJK Length = 278 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 40/147 (27%), Gaps = 11/147 (7%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV---DKSWVSRVAEVIDIPFC 78 F D +AKR + GA + S G + + + + +P Sbjct: 135 GFEVLAYTSDDPVVAKRLEDAGAAA--VMPL-GSPIGTGLGILNPHNIELICARASVPVL 191 Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD-----RFGVQCIVVGIDTWY 133 + G+ + DAA + G + + S + G G Sbjct: 192 LDAGVGTTSDAALAMELGCSGVLLASAVNRCQDPVAMATAMRHAVEAGRLAAAAGRIPKR 251 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETL 160 G + + G S E L Sbjct: 252 THAQGALASSSFEGLASWDEDWAEEVL 278 >UniRef50_A9UW45 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UW45_MONBE Length = 267 Score = 43.7 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 3/71 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + A+R G L T++ + + ++++ + IP G + E Sbjct: 167 IATAQRLEAWGVSLLTIEGRTSAQLDSRRGIANWEDIAQIRAAVGIPILYNGDLVVREQI 226 Query: 90 AKILSFGADKI 100 L++ + Sbjct: 227 EACLAYTGWFV 237 >UniRef50_C6C204 Radical SAM domain protein n=2 Tax=Desulfovibrio RepID=C6C204_DESAD Length = 334 Score = 43.7 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 1/88 (1%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 + I+ A+ AE GA +V + + + + E D+ ++ G +S + Sbjct: 72 VDSIIDSARLAAEAGARTIVLQSGDDFNYSPGQVEEIILGIKESYDVAVTLSLGDRSAGE 131 Query: 89 AAKILSFGADKISINSPALADPTLITRL 116 + GAD+ + A P + ++ Sbjct: 132 YEHWFNCGADRCLLKLETTA-PDIYKKI 158 >UniRef50_C5EPN9 Fructose-1,6-bisphosphate aldolase n=2 Tax=Clostridiales RepID=C5EPN9_9FIRM Length = 283 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 13/180 (7%) Query: 67 SRVAEVIDIPFCVA---GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 ++AE +P + GG E A + G I ++ +L + +++ Sbjct: 71 RQLAERAAVPVALNLDHGG--CFEHAMIAVRSGFSSIMVDRSSLPYEENVAEVSELV--- 125 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 I + +AE G HV ++ + V+ G + + + G Sbjct: 126 KIAHAVGVSVEAELG--HVGSGEQYDADRNAGLTDPGQAKAYVEATGIDALAIAIGTAHG 183 Query: 184 VRNGY---DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G D E L+K+ VPL+ GG+G+ + L + + + I+ Sbjct: 184 KYVGTPYLDFELLEKIYNEVEVPLVLHGGSGSGDENLAKATSMGITKVNIGTDLFQAGID 243 >UniRef50_Q5QZN5 NADH:flavin oxidoreductases, Old Yellow Enzyme family n=3 Tax=Alteromonadales RepID=Q5QZN5_IDILO Length = 372 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 44/151 (29%), Gaps = 24/151 (15%) Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD----WVQEVQKRG 170 +A R +VV + V + + E D V+ ++K G Sbjct: 201 DMAKRMHFLELVVKAAKSAAGDDFIVGVRLSQITVTDSDYQWPEGEDAMIKVVKAMEKAG 260 Query: 171 AGEIVLNMMN--QDGVRNGYDLEQLKKVREVCHVPLIASGGAG--TMEHFLEAFRDADVD 226 I + + + G + V+E +PLI +GG EH Sbjct: 261 VDYIHTTDTDVMRKPFKGGSNKSLGDIVQEFSDIPLIVNGGISEKNYEHV---------- 310 Query: 227 GALAASVFHKQIINIGELKAYLATQGVEIRI 257 H + K LA IRI Sbjct: 311 ------AGHYPNALLAMAKTSLANPDFPIRI 335 >UniRef50_B5YA94 Thiazole biosynthesis protein ThiG n=2 Tax=Dictyoglomus RepID=B5YA94_DICT6 Length = 257 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 3/87 (3%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLE-QLKKVREVCHVPLIASGGAGTMEHFLEAF 220 +++++ G ++ + G G D E LK + + +P+I G G H +A Sbjct: 137 VAKKLEEIGVSAVMPLG-SPIGSNKGIDCETLLKAIIDEISLPVIIDAGIGKPSHASKAM 195 Query: 221 RDADVDGALAASVFHKQIINIGELKAY 247 + D L + +A+ Sbjct: 196 -ELGADAVLINTAIATSNDPFKMAQAF 221 Score = 41.8 bits (97), Expect = 0.022, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 13/113 (11%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKS-WVS 67 + V++G F+ I + +AK+ E G + + + +D + Sbjct: 119 ILVKEG-------FKVFPYISPDLVVAKKLEEIGVSA--VMPLGSPIGSNKGIDCETLLK 169 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS--PALADPTLITRLAD 118 + + I +P + GI A+K + GAD + IN+ DP + + D Sbjct: 170 AIIDEISLPVIIDAGIGKPSHASKAMELGADAVLINTAIATSNDPFKMAQAFD 222 >UniRef50_B0SH97 Dioxygenase n=6 Tax=Leptospira RepID=B0SH97_LEPBA Length = 304 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 3/99 (3%) Query: 36 AKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 A A+ GAD L+ G + + + + + +P AG I + A LS Sbjct: 120 ANIVAKSGADALIAVSQGAGGHAGAITPFALIPYLKKETGLPVIAAGAISNGSQMAAALS 179 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 GAD + I + +A P +R + + I D Sbjct: 180 LGADAVYIGTRFIATPE--SRAQNEYKQMLIDSSPDEIV 216 Score = 41.8 bits (97), Expect = 0.022, Method: Composition-based stats. Identities = 20/176 (11%), Positives = 49/176 (27%), Gaps = 13/176 (7%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADK------ISINSPALADPTLITRLA 117 V V+E I + ++ E + + K +++ +P + Sbjct: 20 ELVVAVSEAGGIGCFPSLNYRTPEQLREGILEIRSKTKKPIGVNLILHKEHNPNWAKQF- 78 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + ++ + + + + TL V K GA ++ Sbjct: 79 ----EVVMDLKVELIITSLGTPRTIAKEIKANGSSLFCDVTTLKHANIVAKSGADALIAV 134 Query: 178 MMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 G + +++ +P+IA+G A D + Sbjct: 135 SQGAGGHAGAITPFALIPYLKKETGLPVIAAGAISNGSQMAAAL-SLGADAVYIGT 189 >UniRef50_Q040I4 L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase n=33 Tax=Bacteria RepID=Q040I4_LACGA Length = 417 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 6/86 (6%) Query: 33 VPLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVI-----DIPFCVAGGIKSL 86 A GAD +V + DG + +A+ + +P + GG++ Sbjct: 251 AEDAMLAIGAGADGIVVSNHGGREVDGAPATIDVLPEIAKAVKSCDHPVPIILDGGVRRG 310 Query: 87 EDAAKILSFGADKISINSPALADPTL 112 K L+ GAD + I P L L Sbjct: 311 SHVFKALALGADLVGIGRPFLYGLAL 336 >UniRef50_A4EBM5 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A4EBM5_9ACTN Length = 678 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 18/189 (9%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-----------VVDK--SWVSR 68 + + + AK G D + A+ G + R Sbjct: 262 RGKGGLQPDEACEFAKLLEGAGIDMIQVA--QANHTGNMGDTIPPMGAMPYNWTLPVAER 319 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVV 127 V ++ +P G + S+E KIL G AD I+ + DP + + A ++ + Sbjct: 320 VKALVSVPVATVGRVVSVEAGEKILEDGAADIIAYGRSLMCDPDIALKAATGEPIRECLN 379 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVT-QWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 DA + +++ E+ T + + ++V G G I + + Sbjct: 380 CNKGCVDAIQNRKYISCVLNAENGDEATIAIKPGEGDKKVAVVG-GGIAGLEAARVAAKR 438 Query: 187 GYDLEQLKK 195 GYD+ + Sbjct: 439 GYDVTVYEA 447 >UniRef50_C5R8W8 Dihydroorotate dehydrogenase B, catalytic subunit n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R8W8_WEIPA Length = 323 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 21/116 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------IT------------ASSDGRVVD---KSWVS 67 + DI PLA GAD L + + G + + Sbjct: 174 VTDIKPLAVTAENAGADGLTMVNTLVGMSLDLQSRSARLYRGKGGLSGEALHPLAVELIW 233 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 A + IP GG+ S++DA +++ GA + + D + +L D Sbjct: 234 EAASAVHIPIIGVGGVSSIDDALELMMAGASAVQVGVMNSIDKLCLPKLIDALPAA 289 Score = 42.5 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%) Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +E + + H+P+I GG +++ LE A Sbjct: 229 VELIWEAASAVHIPIIGVGGVSSIDDALE-LMMAGASAVQVG 269 >UniRef50_Q2SLE2 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLE2_HAHCH Length = 372 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 3/72 (4%) Query: 36 AKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLEDAAKI 92 A+ + D L + D V + + + + +P V GGI+S D K Sbjct: 244 AEIAQKHEVDALYLSNHGGRQLDHHVSAIDMLPHIRQRLGAAMPLIVDGGIRSGADILKA 303 Query: 93 LSFGADKISINS 104 L+ GAD + + Sbjct: 304 LALGADAVGVGR 315 >UniRef50_Q7RX85 Putative uncharacterized protein n=1 Tax=Neurospora crassa RepID=Q7RX85_NEUCR Length = 576 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNG-YDLEQLKKVRE-VCH 201 + R T+ TL + Q V + GA + ++ ++ G + G D E ++ +RE + Sbjct: 152 VTAKIRILDTKEATLKYAQNVLRAGASILTVHGRRREQKGHQTGLADWEYIRYLRENLPK 211 Query: 202 VPLI-ASGGAGTMEHFLEAFRDADVDGALAA 231 +I A+G + DG ++A Sbjct: 212 ETVIFANGNILQHADLEKCLAATGADGVMSA 242 >UniRef50_UPI0001C3656A NADH:flavin oxidoreductase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3656A Length = 646 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 27/195 (13%) Query: 87 EDAAKILSFGADKISINSPA------LADPTLITRLADRFGVQCI-------VVGIDTWY 133 + A + + G D + I++ P R G + VV Sbjct: 155 DAAKRAVDAGFDLVEIHAAHGYLITNFLSPFTNKRGDWYGGSRENRFRFLGQVVENCRRK 214 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI---------VLNMMNQDGV 184 V D +T +T+ + +E++K G +++ ++ + Sbjct: 215 VGPDFPLTVRLSGTDYEPDGMTIEDTIYYAKELEKLGIDAFHISGGDHHTMIHQVSPMAM 274 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS-VFHKQIINIGE 243 Y++ + V++ HVP++ASG ++ + D ++ Sbjct: 275 PVCYNVWAAEAVKKEVHVPVMASGSITLPQYAEDILEQGKADFITLGRPMWADNEW---- 330 Query: 244 LKAYLATQGVEIRIC 258 +K + + +IR C Sbjct: 331 VKKAMEDRPEDIRPC 345 Score = 41.4 bits (96), Expect = 0.031, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 13/114 (11%) Query: 18 VKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDGRVV---------DKSW 65 V+ I D + AK + G D + V + Sbjct: 223 VRLSGTDYEPDGMTIEDTIYYAKELEKLGIDAFHISGGDHHTMIHQVSPMAMPVCYNVWA 282 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLAD 118 V + + +P +G I + A IL G AD I++ P AD + + + Sbjct: 283 AEAVKKEVHVPVMASGSITLPQYAEDILEQGKADFITLGRPMWADNEWVKKAME 336 >UniRef50_A2EKA7 Dihydroorotate dehydrogenase family protein n=3 Tax=Trichomonas vaginalis RepID=A2EKA7_TRIVA Length = 365 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 62/206 (30%), Gaps = 24/206 (11%) Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFG--ADKISINSPALAD-----PTLITRLAD 118 + V IP + G + E A D + +++ + D I Sbjct: 89 IREVCNQAKIPMICSMGYTAEEIAKMAPKVAPFCDGLELSTHYIGDDPKPMQDAIKAAIH 148 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 G + + V + + DA + T +++++GA + Sbjct: 149 GSGGKPVYVKLSPFRDAPIAAKAAKAAGATGLVCVNSFGPT--LALDIERKGAP--FMGS 204 Query: 179 MNQDGVRNGYDLEQLK-----KVREVCHVPLIASGGAGTMEHFLEAFRDAD-----VDGA 228 ++ G +G ++ L V + +P++ GG +E A Sbjct: 205 TSKYGWVSGPAIKPLALRVVYDVCKEVDLPVVGVGGISNGRDAIEFLMAGAQALGICTAA 264 Query: 229 LA-ASVFHKQIINIGELKAYLATQGV 253 + + I E+ +L G Sbjct: 265 IVEGRDVY-GSIA-QEMSQWLTEHGY 288 Score = 39.8 bits (92), Expect = 0.079, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 8/75 (10%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD--------P 110 + + V V + +D+P GGI + DA + L GA + I + A+ + Sbjct: 217 KPLALRVVYDVCKEVDLPVVGVGGISNGRDAIEFLMAGAQALGICTAAIVEGRDVYGSIA 276 Query: 111 TLITRLADRFGVQCI 125 +++ G + I Sbjct: 277 QEMSQWLTEHGYKDI 291 >UniRef50_Q5WK54 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=3 Tax=Bacteria RepID=NANE_BACSK Length = 227 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 56/200 (28%), Gaps = 47/200 (23%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-------------KSLEDAAKILSFGADKI 100 +S R K + + +D+P GI ++ + +++ D I Sbjct: 41 GASGIRANSKEDILEIKSTVDLPVI---GIVKRHYPGSDVYITATMTEVDELMEANVDMI 97 Query: 101 SINSPALADP-TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 ++++ P + + Q V + + T Sbjct: 98 AMDATKQKRPKQSLAEMVAAIRNQYPSVAL------------------------MADVST 133 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGY-----DLEQLKKVREVCHVPLIASGGAGTME 214 L+ E + G I ++ G D LK++ + P+IA G T Sbjct: 134 LEEAIEADRLGFDCISTTLVGYTAYTAGASASDNDFALLKEMVQAVKAPVIAEGKMNTPA 193 Query: 215 HFLEAFRDADVDGALAASVF 234 + A + Sbjct: 194 -LAKCALKAGAHSVVVGGAI 212 >UniRef50_A8ZZX0 Indole-3-glycerol phosphate synthase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=TRPC_DESOH Length = 263 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 62/221 (28%), Gaps = 37/221 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D A +Y GA + +T + + + + + +P I S Sbjct: 75 DPADCAAKYEAGGAAAISV--LTDAPYFKGSLSD-LKQARKACSLPVLRKEFILSDYQVY 131 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GAD + + L L + Sbjct: 132 ESAAAGADAVLLIVRILTQTMLSDLI---------------------------GLCRALG 164 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH---VPLIAS 207 + + + ++ GA I +N +D D+ ++ VP+ A+ Sbjct: 165 LDTLVEIHDENDLETATNAGAKLIGINN--RDLKTFKTDIAVATRLVSNFGPDQVPV-AA 221 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 G G+ E + A + L + + LK L Sbjct: 222 SGIGSREDIERT-KAAGIYNFLIGESLVRAEDTVSFLKQLL 261 >UniRef50_D2BWA1 2-nitropropane dioxygenase NPD n=1 Tax=Dickeya dadantii Ech586 RepID=D2BWA1_DICD5 Length = 318 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 6/77 (7%) Query: 164 QEVQKRGAGEIVLNMMNQDGVR----NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 +E + GA I+ ++ G G + + + VP+IA+GG G + A Sbjct: 138 KEAEMLGADIIIATGFDEGGTVPTRVIGT-FSIVPMIVDSVKVPVIAAGGIGDIRGVRAA 196 Query: 220 FRDADVDGALAASVFHK 236 +G A S+F Sbjct: 197 L-ALGAEGVYAGSLFLT 212 >UniRef50_A4FDB3 2,4-dienoyl-CoA reductase n=4 Tax=Actinomycetales RepID=A4FDB3_SACEN Length = 672 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + + V R+ +D+P V+ ++ D L GAD + + +ADP Sbjct: 279 GMATTSPPLLASVDRLRAALDVPLLVSQSFRTTADIEAALRSGADLVGVARALIADPDFP 338 Query: 114 TRLAD 118 ++ Sbjct: 339 KKVLA 343 >UniRef50_Q0W8E1 Dihydroorotate dehydrogenase n=18 Tax=Euryarchaeota RepID=PYRD_UNCMA Length = 301 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 59/190 (31%), Gaps = 30/190 (15%) Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCI 125 +A +P + + E+ + + GAD +N ++ P A +G+QC Sbjct: 85 EIARESGVPVIASIFGATPEEFTAVANGLPGADAYELN---VSCPH-----AKGYGMQCG 136 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN------MM 179 + K V + VT + + A + + Sbjct: 137 TDPELVRSITKAVKAAVKVPVWVKLTPNVTDIRPIGLAAQEGGADAVVAINTLKAMAIDI 196 Query: 180 N--------QDGVRNGYDLEQLK-----KVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 N + G +G ++ + + EV +P+I GG +E F A Sbjct: 197 NTGWPILGNRSGGLSGPAVKPVAIKCVYDLYEVLDIPVIGVGGVSNWADAIE-FMMAGAC 255 Query: 227 GALAASVFHK 236 S ++ Sbjct: 256 AVEIGSAVYE 265 >UniRef50_Q471J2 NADH:flavin oxidoreductase/NADH oxidase n=7 Tax=Proteobacteria RepID=Q471J2_RALEJ Length = 433 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%) Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 V + + +P GG+KSL++ +L G D I++ + DP L+ Sbjct: 315 LEASRVVRQAVQMPLAYIGGVKSLQNVDALLGEGFDCIALARALIHDPALVEHW 368 >UniRef50_A3DJQ8 NADH:flavin oxidoreductase/NADH oxidase n=3 Tax=Clostridium thermocellum RepID=A3DJQ8_CLOTH Length = 645 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 61/199 (30%), Gaps = 25/199 (12%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWV--------------- 66 F + + + +AKR + G D L G + + + Sbjct: 231 GFPGGRELDETIEIAKRLKQIGIDTLHL------RRGSYDNMNLLIPTEYMEDAVSVDYA 284 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLIT--RLADRFGVQ 123 ++V E I G I A K++ D + + LADP + R + + Sbjct: 285 AKVREQAGIQVISDGNISDPVLANKLMEENKLDFVGLGRALLADPEWVNKVRADKKEDIV 344 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 V + G+Y + ++ ++V G G + + Sbjct: 345 PCVRCMQCINRIFFGQYAACSVNPVLGKEYLSPILPAKKPKKVLVIG-GGMAGMAFAKMA 403 Query: 184 VRNGYDLEQLKKVREVCHV 202 G+D+ L+ E+ Sbjct: 404 EEKGHDVTLLESTSELGGH 422 >UniRef50_D1N5U0 Dihydrouridine synthase DuS n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5U0_9BACT Length = 288 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 7/51 (13%), Positives = 20/51 (39%) Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +R VP++ +G + + E G + A + + + + ++ Sbjct: 174 LRLAAPVPVVLNGDIDSPDDASELLERTGAAGVMCARGWLRDPLLLNRIRQ 224 >UniRef50_P30300 Glycerol uptake operon antiterminator regulatory protein n=91 Tax=Bacillales RepID=GLPP_BACSU Length = 192 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 S + + E IP G I++ ED + L GA ++ ++ L Sbjct: 137 SLIQEIKEKTGIPIFAGGFIRTEEDVEQALKAGAVAVTTSNTKL 180 Score = 42.1 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 19/162 (11%), Positives = 48/162 (29%), Gaps = 17/162 (10%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV-VGIDTWYDAETGKYH 141 I++++ + L+ I L + + A + G +V V + + Sbjct: 13 IRNMKQFDEFLNSSFSYGVILDIHLGQLKGVIKEAQKHGKNMMVHVDLIQGIKHDEYGAE 72 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--------------- 186 + T+ + ++ + + L + Sbjct: 73 FICQDIKPAGIISTRSNVIAKAKQKKIYAIQRLFLLDTSAMEKSMEFIGKHKPDFIEVLP 132 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 G +++++E +P+ A G T E +A + A Sbjct: 133 GIVPSLIQEIKEKTGIPIFAGGFIRTEEDVEQALK-AGAVAV 173 >UniRef50_B1ZS75 2-nitropropane dioxygenase NPD n=2 Tax=Bacteria RepID=B1ZS75_OPITP Length = 363 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 1/46 (2%) Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + ++ + VP+IA+GG A DGA + F Sbjct: 204 FSLIPQIVDAVSVPVIAAGGIADGRGVAAAL-MLGADGAQVGTAFL 248 Score = 41.4 bits (96), Expect = 0.032, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 12/90 (13%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDK-----------SWVSRVAEVIDIPFCVAG 81 V A G ELV + + R S + ++ + + +P AG Sbjct: 164 VDEAVALERAGI-ELVVASGSDAGGHRPSFLRAAGESLVGTFSLIPQIVDAVSVPVIAAG 222 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPT 111 GI A L GAD + + LA Sbjct: 223 GIADGRGVAAALMLGADGAQVGTAFLACDE 252 >UniRef50_A4E8R9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8R9_9ACTN Length = 539 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 52/179 (29%), Gaps = 24/179 (13%) Query: 10 LDVRDGQVVKGVQFRNHEIIG----DIVPLAKRYAEEGADELVFYDIT---------ASS 56 +DVR + + G D++ +++R + G D + T A+ Sbjct: 110 IDVR-------ISGDEYTDGGLTLNDMIYVSRRLEKAGVDMIHVSGGTTIKRGSAIPAAG 162 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 + + + + ++IP G I A +++ AD + L D + Sbjct: 163 TQQASHAACSREIKKHVNIPVATVGRINEAWIAEELIEDSAADICMMGRANLCDAEFCNK 222 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR--TRVTQWETLDWVQEVQKRGAG 172 A I I + +E + V GAG Sbjct: 223 AAAG-NADDIRPCIGCLRCLNGIMFGKRISCTVNPDVERDEAGYEPAAEAKNVLVVGAG 280 >UniRef50_A5UUL3 Thiamine-phosphate pyrophosphorylase n=5 Tax=Bacteria RepID=THIE_ROSS1 Length = 236 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 7/107 (6%) Query: 33 VPLAKRYAEEGADELVFYDITAS----SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 V A+R + GA + D+ + G + ++ +A +++P GGI +L + Sbjct: 132 VEQAQRAMDAGATYVSVGDLFGTPSKPDAGPPIGLEPLAEIARTVNLPVLGIGGI-NLAN 190 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 AA ++ GA +++ S + P A R I +D A Sbjct: 191 AASVIRAGAVGVAVISAVIGAPD--PEAATRALHAVIASALDERARA 235 >UniRef50_Q98NG5 Oxidoreductase n=4 Tax=Proteobacteria RepID=Q98NG5_RHILO Length = 367 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 35/103 (33%), Gaps = 6/103 (5%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVF-----YDITASSDGRVVDKSWVSRVAEVIDIPFC 78 + D + +AK EG L + G V + IP Sbjct: 240 DGGFDVEDAIEVAKALKAEGIAYLCCSSGGNSPLQKLPTGPGYQVHLAEAVRKGAGIPTR 299 Query: 79 VAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRF 120 G I + A +++ G AD +++ LADP R A F Sbjct: 300 AVGLIDDPQQAEAVIAEGRADMVALARAFLADPRWGWRAAATF 342 >UniRef50_B7APY3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APY3_9BACE Length = 321 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 63/188 (33%), Gaps = 20/188 (10%) Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 DI G + + ++ I++L D +G D++++N P Sbjct: 58 DID---SGNNRPRDVIPQILSNNSCDCIKV--IRALHD-----EYGYDEVNLNLGC-PSP 106 Query: 111 TLITR----LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 T++T+ F + D + A GK V + E + + Sbjct: 107 TVVTKHKGAGFLAFPDKLDSFLNDVFVAA--GKDGVRVSVKTRTGVESHD-EFIKILDIY 163 Query: 167 QKRGAGEIVLN-MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD-AD 224 + E++++ + +D +N D + + P+ +G +++ + Sbjct: 164 NQYPLSELIVHPRVQKDLYKNSPDYDIFEYAYTNSKAPVCYNGDICSVDDYQRITSRFNG 223 Query: 225 VDGALAAS 232 ++ + Sbjct: 224 LNAVMCGR 231 >UniRef50_C7T9L6 Fructose-bisphosphate aldolase n=4 Tax=Bacilli RepID=C7T9L6_LACRG Length = 297 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 51/153 (33%), Gaps = 8/153 (5%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 ++E+ + + G + I+ +L D + I + + E G Sbjct: 84 TIENVERAIHDGFSSVMID-GSLEDWEKNVAITKE--TVTICHRLGVSVEGELGTIGQTG 140 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVL-----NMMNQDGVRNGYDLEQLKKVREV 199 E + D + V++ G + + + + V ++ LK++ V Sbjct: 141 NHIKEHLQNGIYTQPDDAKKFVEETGVDTLAVGIGTAHGIYPSDVTPKIRIDILKEILAV 200 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 VPL+ GG+ + + + +S Sbjct: 201 VDVPLVLHGGSSNPDDQIAEAVKTGIAKVNISS 233 >UniRef50_Q0VNU6 NADH:flavin oxidoreductase/NADH Oxidase, putative n=12 Tax=Bacteria RepID=Q0VNU6_ALCBS Length = 417 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 69/195 (35%), Gaps = 45/195 (23%) Query: 35 LAKRYAEEGADELVFYD--------------ITASSDGRVVDKSWVSRVAEVIDIPFCVA 80 +AK A+EG D L ++ + + + + + + +P V Sbjct: 245 VAKTLADEGLDLLEISGGNYENPVMAGAKGVRESTVNREAYFLDYANEIRKRVSVPLMVT 304 Query: 81 GGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 GG +S + A+ ++ GA D I I P +P L + G + +V + Sbjct: 305 GGFRSAKAMAEAVNSGATDVIGIARPLAVEPDLPNAIQA--GREGVVSRVTPRKT----- 357 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 G ++ + E + +++ + GA G + L + + Sbjct: 358 -------GIKAIDEMAMMEVSWYTRQLHRMGA-----------GKEPKPNESVLLALFK- 398 Query: 200 CHVPLIASGGAGTME 214 +IA+ G G+ + Sbjct: 399 ----VIATMGVGSFK 409 >UniRef50_C8PKB5 Dioxygenase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PKB5_9PROT Length = 319 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 3/83 (3%) Query: 33 VPLAKRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 V A+ EEGAD ++ ++ S V +A+ + +P AGGI + Sbjct: 138 VNSARAAQEEGADIIIATGYDKGGVLPQNKIGTFSIVPIIADTVSVPVMAAGGINDVRGV 197 Query: 90 AKILSFGADKISINSPALADPTL 112 + GA + + + +A Sbjct: 198 RAAFALGASGVYVGTRFIASTEC 220 >UniRef50_C5RMS0 Tryptophan synthase alpha chain n=1 Tax=Clostridium cellulovorans 743B RepID=C5RMS0_CLOCL Length = 256 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 69/225 (30%), Gaps = 62/225 (27%) Query: 27 EIIGDIVPLAKRYAEEGADEL----VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG- 81 D V E G L D+ + V ++ +V DIP + G Sbjct: 52 VPFSDPVTDGVVIQESGIKSLKNGTTLADV----------LALVEKIRKVSDIPLLLMGY 101 Query: 82 -------GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 G ++ + G + + I L + LI+ +G+ I Sbjct: 102 LNPFYKYGFENF--FKEARRVGVEGVIIPDLPLEEFPLISDYVKNYGIDYIPFF------ 153 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE--- 191 + ++ + + + G G + + + GV DL+ Sbjct: 154 --------------------SPTTPIERINSLCEVGGGFLYV--VTSLGVTGEKDLDKES 191 Query: 192 ---QLKKVREVCHVPLIASG-GAGTMEHFLEAFRDADVDGALAAS 232 LK+++ +P IA+G G + E DG + + Sbjct: 192 LRKALKEIKSHSSLP-IAAGFGISSKEDIAGIIDS--CDGVIVGT 233 Score = 39.8 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 15/86 (17%) Query: 32 IVPLAKRYAEEGADELVFY---------DITASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 + E G L D+ + + + + +P G Sbjct: 158 PIERINSLCEVGGGFLYVVTSLGVTGEKDLD-----KESLRKALKEIKSHSSLPIAAGFG 212 Query: 83 IKSLEDAAKILSFGADKISINSPALA 108 I S ED A I+ D + + + + Sbjct: 213 ISSKEDIAGIIDS-CDGVIVGTKIIK 237 >UniRef50_UPI0001789C76 2-nitropropane dioxygenase NPD n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C76 Length = 321 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY---DLEQLKKVREVCHVPLIASGGAGTME 214 T++ + E +K G +++ G + Y L + ++ + +P+IA+GG + Sbjct: 137 PTVEKLVEAEKTGVDALIVTGYEAGGHMSDYKISTLSLVPQITSIVKIPVIAAGGIIDSQ 196 Query: 215 HFLEAFRDADVDGALAAS 232 AF +G + Sbjct: 197 GAKAAF-SMGAEGVYMGT 213 Score = 40.6 bits (94), Expect = 0.054, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 70/201 (34%), Gaps = 28/201 (13%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEE---GADELVFYDITASSDG------RVVDKSWVSRV 69 + + + D+ P ++ E G D L+ T G ++ S V ++ Sbjct: 122 RLKEHDIKVVYRDLSPTVEKLVEAEKTGVDALIV---TGYEAGGHMSDYKISTLSLVPQI 178 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 ++ IP AGGI + A S GA+ + + + + + I V Sbjct: 179 TSIVKIPVIAAGGIIDSQGAKAAFSMGAEGVYMGTRFIVTKE--NPASTETKKAIIKVKS 236 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 + + + ++G H+ + + + + + + G G + G+ +G Sbjct: 237 EEFIEFKSGSGHLRTIPTEAGKKALELINQGNHAEAYKYYGEGF-------KIGMLDGDL 289 Query: 190 LEQLKKVREVCHVPLIASGGA 210 + V E A+GG Sbjct: 290 INGTISVSE-------AAGGI 303 >UniRef50_B8ZUG3 Pyridoxal biosynthesis lyase pdxS n=332 Tax=cellular organisms RepID=PDXS_MYCLB Length = 307 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 26/234 (11%), Positives = 54/234 (23%), Gaps = 25/234 (10%) Query: 34 PLAKRYAEEGADELVFYDITA------SSDG--RVVDKSWVSRVAEVIDIPFCVAGGIKS 85 A+ GA + + + G R+ D + + + IP I Sbjct: 42 EQARIAEGSGA--VAVMALERVPSDIRAQGGVSRMSDPDMIESIIAAVTIPVMAKARIGH 99 Query: 86 LEDAAKILSFGADK-----ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 +A + S G D + + + + Sbjct: 100 FVEAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRINEGAAMI 159 Query: 141 HVNQYTGDESRTRV-TQWETLDW-VQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVRE 198 G + T + ++ + E+ + E + +V Sbjct: 160 RSKGEAGTGDVSNATTHMRAIAGDIRRLTSLSEDELYVAA-----KELHAPYELVIEVAR 214 Query: 199 VCHVPLI--ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +P+ +GG T +G S K A + Sbjct: 215 TNKLPVTLFTAGGIATPADA-AMMMQLGAEGIFVGSGIFKSSDPAQRAAAIVKA 267 >UniRef50_A4VL89 Morphinone reductase n=2 Tax=cellular organisms RepID=A4VL89_PSEU5 Length = 372 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 37 KRYAEEGADELVFY--DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 + A+ G D L D A + G + ++R + IP G I + E A +L Sbjct: 254 RILADAGLDYLHITEPDARAPAFGEGPSLAAIAR--GSVAIPVIGNGAIVTGEQAEALLG 311 Query: 95 FG-ADKISINSPALADPTLITRL 116 G D +++ ALA+ R+ Sbjct: 312 RGEMDLVAVGKAALANNDWPQRI 334 >UniRef50_Q54QJ2 tRNA-dihydrouridine synthase 2-like protein n=1 Tax=Dictyostelium discoideum RepID=Q54QJ2_DICDI Length = 402 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 25/157 (15%) Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 + S L+ P I + + I T ET+D Sbjct: 145 MGSALLSKPETIKDILTTLKRNLNGIPITCKIR-----------------LLSTDQETID 187 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCH--VPLIASGGAGTMEHFLE 218 ++ ++ G I ++ ++L+ + VP+IA+G + Sbjct: 188 LLRIIESTGVSAIGVHCRMIPERPRDPAHWDRLENILSNASFSVPIIANGDIFEHADIEK 247 Query: 219 AFRDADVDGALAASVFHKQ-----IINIGELKAYLAT 250 + VD + A K + +LK + Sbjct: 248 IKKQTKVDSIMIARGVVKNVSIFSKPSPIDLKQIIQE 284 >UniRef50_Q38V36 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=7 Tax=Lactobacillaceae RepID=NANE_LACSS Length = 231 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 58/213 (27%), Gaps = 45/213 (21%) Query: 35 LAKRYAEEGADEL---VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 +A+ E GA + D V + + +++P Sbjct: 34 MARAAYEAGASAIRANSVVD--------------VQAIMDTVELPVI------------- 66 Query: 92 ILSFGADKISINSPALADPTLITRL--ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 G DK+ + + I + G + + + T Sbjct: 67 ----GLDKVDYSDAPIYITPTIKEMRGIAATGAAVVACDVTGRPRPHGEQLATIVETMRT 122 Query: 150 SRTRV---TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-----DLEQLKKVREVCH 201 +LD V+E + G I M G D E LK+V + Sbjct: 123 EYPDTLLMADTASLDDVKEANRLGFDIIGTTMYGYTPATEGCNIADNDFEYLKQVLAMSK 182 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 P+IA G + E + A + + S Sbjct: 183 APVIAEGKIDSPEKAVTALK-LGCHSVVVGSSI 214 >UniRef50_D1PX20 Inosine-5'-monophosphate dehydrogenase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PX20_9BACT Length = 549 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 67/235 (28%), Gaps = 34/235 (14%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDG--------RVVDKSWVSRVAEVIDIPFCVAGG 82 D+ A+ E ++L D G + DK + E + G Sbjct: 226 DLTAAAQILQEHKIEKLPVVDANNRLIGLITYKDITKAKDKPMACK-DEKGRLRVAAGVG 284 Query: 83 IK--SLEDAAKILSFGADKISINSPALADP---TLITRLADRFGVQCIVVGIDTWYDAET 137 + +L+ A ++ G D I I++ + ++ F +VVG +A Sbjct: 285 VTADTLDRAQALVDAGVDAIVIDTAHGHSKGVVDKLHQVKAAFPNVDVVVGNIATGEAAK 344 Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKV 196 G G I + G+ + + Sbjct: 345 YLVDNGADAVKVG------------------IGPGSICTTRIVAGVGMPQLSAVYDVFSA 386 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + VPL+A GG ++A + S+ + GE Y + Sbjct: 387 LKGTDVPLVADGGLRYSGDIVKALAAGG-SCVMVGSLVAGTEESPGETIIYNGRK 440 >UniRef50_Q2FTP1 Isopentenyl-diphosphate delta-isomerase, FMN-dependent n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FTP1_METHJ Length = 363 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 56/236 (23%), Gaps = 68/236 (28%) Query: 33 VPLAKRYAE---EGADELVFYDITASSDGRVVD-----KSWVSRVAEVIDIPFCV---AG 81 + A+R E A + + + + + + + +P V Sbjct: 137 IEWAERAVEMIDADALAIHLNFLQEAIQPEGDHDAGGCYAALRELCRDLKVPVIVKETGS 196 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 GI S E + GA + I +G + + GK Sbjct: 197 GI-SYETGIRCFGAGAACVDIG---------------GYGGSSWALIESHRSGSVAGKE- 239 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH 201 + + G +V + R C Sbjct: 240 --------------DLHLKGLGERFGEWGLPTVV---------------SLYETTR--CG 268 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVF------HKQIINIGELKAYLATQ 251 P+IASGG + +A LA + + E + + Sbjct: 269 GPVIASGGIRSGIDITKALV-MGAH--LAGMALPLLKPACEGPDVLRETIRTIHQE 321 >UniRef50_Q2LPX4 N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LPX4_SYNAS Length = 249 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 39/87 (44%), Gaps = 6/87 (6%) Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD---GVRNGYDLEQLKKVREVCHVPLIA 206 + R + + +D + ++ ++L+ ++ G D +++R+ +P+I Sbjct: 120 GKFRSSCEDPIDAARLIEDAKVDALLLDSVSDSRPAGTGRSIDWGLARRIRDKVRLPVIL 179 Query: 207 SGG--AGTMEHFLEAFRDADVDGALAA 231 +GG AG + +EA VD ++ Sbjct: 180 AGGLDAGNIGKAIEAVNPYGVD-VISG 205 Score = 42.1 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 9/118 (7%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADEL---VFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 + D + A+ + D L D + GR +D R+ + + +P + Sbjct: 120 GKFRSSCEDPIDAARLIEDAKVDALLLDSVSDSRPAGTGRSIDWGLARRIRDKVRLPVIL 179 Query: 80 AGGI---KSLEDAAKILSFGAD---KISINSPALADPTLITRLADRFGVQCIVVGIDT 131 AGG+ + + +G D + DP + V+ Sbjct: 180 AGGLDAGNIGKAIEAVNPYGVDVISGVENQEERKKDPQKVRAFVKAVVDAQPVLSSTF 237 >UniRef50_A4XGU3 Biotin synthase n=40 Tax=Bacteria RepID=A4XGU3_CALS8 Length = 358 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 51/159 (32%), Gaps = 15/159 (9%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 +IV +AKR + G +V + S + ++ E +D+ ++ G +S E+ Sbjct: 92 DEIVEVAKRAYDMGYRTVVLQSGEDPYYTKDKVCSIIKKIKEEVDVAITLSIGERSYEEY 151 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 GAD+ + L ++ + + ++ Sbjct: 152 KAFREAGADRYLMRFETSN-----RELYQKYHPGM----------SFENRIECLRWIKSL 196 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 T + Q + +++ ++ D + G Sbjct: 197 GYELGTGFLIGLPGQTIDDLANDILLVYELDSDMIGIGP 235 >UniRef50_C6IIM3 Dihydrouridine synthase n=15 Tax=Bacteroides RepID=C6IIM3_9BACE Length = 314 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 2/83 (2%) Query: 158 ETLDWVQEVQKRGAGEIVLN-MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 E L + +I ++ + + G + DL+ REVC +PL+ +G +E Sbjct: 146 ECLALAPILNDLPLRQITMHPRLGKQGYKGEVDLQGFSAFREVCQLPLVYNGDIHNLEDI 205 Query: 217 LEAFRD-ADVDGALAASVFHKQI 238 + G + Sbjct: 206 QRISTQFPSLAGIMIGRGLLANP 228 >UniRef50_A9KRF8 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=Clostridiales RepID=A9KRF8_CLOPH Length = 354 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 35/108 (32%), Gaps = 15/108 (13%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV--------VDKSWV---SRVAE 71 + D + A+ + E G D F DI+ K + ++ E Sbjct: 216 GGFEPTLEDAIAYARIFEESGVD---FLDISYGFVQESTPVVPKDYPFKDIIYAAQKIKE 272 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 + IP GI S E A KIL D + I L + + Sbjct: 273 AVSIPVFAVNGINSPELADKILEQTKVDMVDIGRGTLVNYNWANDAKE 320 >UniRef50_O83945 Probable tRNA-dihydrouridine synthase n=4 Tax=Treponema RepID=DUS_TREPA Length = 340 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 39/163 (23%), Gaps = 11/163 (6%) Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 ++ G I + A L + V V DA + + Sbjct: 106 INAGCPMPKI-TKTGAGAALTREPTRLYEVVKAVADAVYAQDAR-----IPVTVKIRAGW 159 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH----VPLIAS 207 + + GA + L+ G + + + + + VP+ S Sbjct: 160 EEAHLTWKEAARAAVDAGAQALALHPRTCAQCYAGEANWDIIADLVQCARGWGEVPVFGS 219 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G E G + A + + L Sbjct: 220 GDLHAPEDARAMLEHTACAGVMFARGAMGNPFIFRQTRQLLTE 262 >UniRef50_C7DGQ8 Geranylgeranylglyceryl phosphate synthase family protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGQ8_9EURY Length = 239 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 2/70 (2%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 LA G L S + V +++ A+ P V GGI+ Sbjct: 155 LAIGAEGMGLKALYLEG--GSGSSKPVPPAFIEEAAKSTKFPIIVGGGIRDNRSVMAAAK 212 Query: 95 FGADKISINS 104 GAD I S Sbjct: 213 AGADIIVTGS 222 >UniRef50_A9BIU8 Dihydroorotate dehydrogenase family protein n=10 Tax=Bacteria RepID=A9BIU8_PETMO Length = 363 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 25/114 (21%) Query: 31 DIVPLAKRYAEEGADELVFY-------DIT--------------ASSDGR---VVDKSWV 66 DI AK GAD LV DI G+ + V Sbjct: 158 DIPKFAKEAENAGADGLVLINSFGPTLDIDLESGKPLLGSENGFGWLSGQAIFPLALRSV 217 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD-PTLITRLADR 119 ++IP GGI + ++A K++ GA + + + A+ + P + ++ + Sbjct: 218 FEAVRSVNIPVVGVGGINTGKEAIKMIMAGAQAVQVCTAAILNGPQIYKKITNE 271 >UniRef50_A6G755 Indole-3-glycerol-phosphate synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G755_9DELT Length = 264 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 63/217 (29%), Gaps = 45/217 (20%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 D +A Y GA + DG + V + +P I Sbjct: 70 PLRESADPKHIASLYVAAGAAAISVL-TDRHFDGS---FEDLRTVRAAVSVPVLCKDFII 125 Query: 85 SLEDAAKILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 S + GAD I + AL P L + A G+QC+V D Sbjct: 126 SRSQIIRARQEGADAILLIVAALEPPMLRDLHNFATDLGLQCLVEAHDDHE--------- 176 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV 202 V+ GA + LN ++ DL+ + +R V Sbjct: 177 --------------------VERAMAAGAKIVGLNS--RNLQTFEVDLDNI--IRYRPDV 212 Query: 203 P---LIASG--GAGTMEHFLEAFRDADVDGALAASVF 234 P + G G + R A VD L SV Sbjct: 213 PREGFLYVGESGIQDRKDVRR-LRAAGVDAILVGSVL 248 >UniRef50_A5USQ4 Indole-3-glycerol phosphate synthase n=8 Tax=Bacteria RepID=TRPC_ROSS1 Length = 269 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 56/206 (27%), Gaps = 27/206 (13%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + LA YA GA + G + + + + +P Sbjct: 72 DPLALAHTYASNGASAISVLTDVRFFQGSLKHLEGIRAMVDRGAVP-------------- 117 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + DP + +G +++ + D ++ Sbjct: 118 -------PLPLLRKDFIIDPYQVAEA-RAYGADALLLIVAALDDETLAALLALTHSF--G 167 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG-VRNGYDLEQLKKVREVCHVPLIAS-G 208 + + D ++ GA I +N + +L + + PL+ S Sbjct: 168 MQALVEVHNEDELRRALDAGASIIGVNNRDLHSFTTTLETTRRLAALLPSSNRPLLVSES 227 Query: 209 GAGTMEHFLEAFRDADVDGALAASVF 234 G T EH R D L Sbjct: 228 GIFTAEHV-ALVRSWGADAILVGEAL 252 >UniRef50_A4RM51 Putative uncharacterized protein n=2 Tax=Saccharomyceta RepID=A4RM51_MAGGR Length = 614 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNGY-DLEQLKKVRE-VCH 201 + R T TL + + V GA + ++ ++ G G D ++ +RE + Sbjct: 188 VTAKIRILDTPEATLAYARNVLDAGASILTVHGRRREQKGHLTGVADWSAIRHLRENLPP 247 Query: 202 VPLI-ASGGAGTMEHFLEAFRDADVDGALAA 231 +I A+G D ++A Sbjct: 248 ETVIFANGNILQRGDLERCLEATGADAVMSA 278 Score = 42.1 bits (98), Expect = 0.017, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 6/88 (6%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IPFCVAGGIKSLE 87 + A+ + GA L + G + D S + + E + G I Sbjct: 202 LAYARNVLDAGASILTVHGRRREQKGHLTGVADWSAIRHLRENLPPETVIFANGNILQRG 261 Query: 88 DAAKILSF-GADKISINSPALADPTLIT 114 D + L GAD + L+DPTL Sbjct: 262 DLERCLEATGADAVMSAEGNLSDPTLFA 289 >UniRef50_Q01NZ1 Thiazole synthase n=5 Tax=Bacteria RepID=THIG_SOLUE Length = 259 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 16/110 (14%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-----GRVVDKS 64 + V++G V D + A+R E GA + A + Sbjct: 122 ILVKEGFAV-------LPYTNDDIVNARRLIEAGAAA--VMPLAAPIGSGLGIQNPTNLR 172 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 + ++P V G+ + DAA + GAD + +N+ A + Sbjct: 173 IFREMI--TEVPVIVDAGVGTASDAAIAMELGADGVLMNTAIAAAEDAVK 220 >UniRef50_A6BK55 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK55_9FIRM Length = 288 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 54/167 (32%), Gaps = 9/167 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 L+ K+ +G D++++N T++++ G ++ + D K V Sbjct: 48 LDTVEKLKGYGYDEVNLNLGC-PSKTVVSKG-RGSGFLIHTEELNWFLDEIYAKADVKIS 105 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + ++ + E++++ Q G DL+ + C L Sbjct: 106 IKTRIGKFDADEW-GELLRIYNQYPLEELIVHPRVQQQFYKGHPDLDAFADAVKECKHTL 164 Query: 205 IASGGAGTMEHFLEAFRD-ADVDGALAASVFHKQIINIGELKAYLAT 250 +G T E + + + + + EL + + Sbjct: 165 CYNGDIFTTEDMEKLKKRFPEASCIMLGRGILRNP----ELIEIMES 207 >UniRef50_P20409 N-(5'-phosphoribosyl)anthranilate isomerase n=203 Tax=cellular organisms RepID=TRPG_PHYBL Length = 765 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 33/229 (14%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + A +YA GA + +T R + +V E + Sbjct: 303 NAAEQALQYALAGASVISV--LTEPKWFRGSLND-LRQVREACPL--------------- 344 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + + L D I +G +++ + D + + QY+ Sbjct: 345 -LPNRPC---ILRKTFLLDTYQILEA-RLYGADTVLLIVAMMSDEDLREL--YQYSVSLG 397 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASG 208 + + + + GA I +N + D+E ++ E+ L A Sbjct: 398 MEPLVEVNNAEEMARANAVGAKLIGVNN--RGLHSFDVDMETTSRLAEMVPEGTILCALS 455 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA--TQGVEI 255 G T E + V G L + N+ E A L + + Sbjct: 456 GISTRADV-ETYVSQGVHGLLVGEALM-RAWNLKEFVAELLGYKKKDPV 502 >UniRef50_UPI00006A2AD3 UPI00006A2AD3 related cluster n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A2AD3 Length = 322 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 59/191 (30%), Gaps = 11/191 (5%) Query: 21 VQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW---VSRVAEVIDIPF 77 + V A + + GAD +V A + D + V + + + IP Sbjct: 109 RHGMAWVHVAPAVRFAHKAEQLGADAVVLVGFEAGGHPGMDDIALSVLVRKASAELTIPV 168 Query: 78 CVAGGIKSLEDAAKILSFGADKISINS------PALADPTLITRLADRFGVQCIVVGIDT 131 AGGI L++GA+ + I + + P + R + V+ + Sbjct: 169 IAAGGICDGRSMVAALAWGAEGVQIGTRFVLTHETVLHPD-VKRALQQASEHDTVMIERS 227 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 A + +E + + + I+ +++ + G + Sbjct: 228 LGKARRVLRTARADAVLALERQGASFEEMRHIIGGEAY-LDTILHGRIDRGVLSTGQCIG 286 Query: 192 QLKKVREVCHV 202 L V V Sbjct: 287 LLDDVPSAGDV 297 Score = 42.9 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 48/143 (33%), Gaps = 16/143 (11%) Query: 123 QCIVVGIDTWYDAETGKYHVNQY--------TGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + +D D + + + V + + + ++ GA + Sbjct: 76 RSMAEFVDCLCDLDVRIVFTSGHNPAPFVAQIKRHGMAWVHVAPAVRFAHKAEQLGADAV 135 Query: 175 VLNMMNQDGVRNGYDLEQ---LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 VL G D+ ++K +P+IA+GG + A +G Sbjct: 136 VLVGFEAGGHPGMDDIALSVLVRKASAELTIPVIAAGGICDGRSMVAAL-AWGAEGVQIG 194 Query: 232 SVF---HKQIINIGELKAYLATQ 251 + F H+ +++ ++K L Sbjct: 195 TRFVLTHETVLHP-DVKRALQQA 216 >UniRef50_C9XJU2 Dihydroorotate dehydrogenase, catalytic subunit n=5 Tax=Clostridium difficile RepID=C9XJU2_CLODC Length = 361 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 23/102 (22%) Query: 29 IGDIVPLAKRYAEEGADELVF---------YDIT-----------ASSDG---RVVDKSW 65 I +I AK+ E GAD + DI G + + Sbjct: 151 IDEIGDFAKKLEEAGADAITACDSVGPAFRIDIETGQPLLGGNGIGYLSGETIKPITLQR 210 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 + + + ++IP GG S +DA +++ GAD + I S + Sbjct: 211 IYEIKKQVNIPIIGLGGCVSGDDALEMIMAGADFVGICSVVI 252 >UniRef50_B8HFM3 TIM-barrel protein, nifR3 family n=4 Tax=Actinomycetales RepID=B8HFM3_ARTCA Length = 392 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 3/108 (2%) Query: 33 VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAA 90 + + + G + + TA+ D S ++R+ E + DIP G I S EDA Sbjct: 172 LDAGRIARDSGVAAVALHGRTAAQFYSGQADWSAIARLREALPDIPVLGNGDIWSAEDAV 231 Query: 91 KIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAET 137 +++ G D + + P L L F + + AE Sbjct: 232 RMVRETGVDGVVVGRGCQGRPWLFGDLQAAFEGSDVRHRPNLRQVAEG 279 Score = 41.0 bits (95), Expect = 0.045, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 2/90 (2%) Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 E K ++ LD + + G + L+ +G D + Sbjct: 148 EASKGNIPLTIKMRKGIDDDHLTYLDAGRIARDSGVAAVALHGRTAAQFYSGQADWSAIA 207 Query: 195 KVREV-CHVPLIASGGAGTMEHFLEAFRDA 223 ++RE +P++ +G + E + R+ Sbjct: 208 RLREALPDIPVLGNGDIWSAEDAVRMVRET 237 >UniRef50_B7RZ94 Dihydroorotate dehydrogenase family protein n=3 Tax=Bacteria RepID=B7RZ94_9GAMM Length = 552 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +K+V EV +P+I GG + + AF DA + S Sbjct: 238 VKEVAEVSDLPIIGCGGVSSADDV-RAFFDAGAEIVGVGSAL 278 Score = 42.1 bits (98), Expect = 0.018, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 20/96 (20%) Query: 31 DIVPLAKRYAEEGADEL-----------------VFYDITASSDGRVVD---KSWVSRVA 70 DI +A+ GAD V + G+ + V VA Sbjct: 183 DITVIARAAEAGGADGFCAINTVGPGYTSAHGHPVLSNGAGGMSGKGILPIGLKCVKEVA 242 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 EV D+P GG+ S +D GA+ + + S Sbjct: 243 EVSDLPIIGCGGVSSADDVRAFFDAGAEIVGVGSAL 278 >UniRef50_Q1IKU8 2-nitropropane dioxygenase, NPD n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKU8_ACIBL Length = 356 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 10/85 (11%) Query: 37 KRYAEEGADELVFYDITA----------SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 + A G D +V A +G V ++ V+ +A + +P +GGI + Sbjct: 161 QLLASAGVDAIVAQGAEAGGQRGTFDVSFEEGLVPLRALVAGLANAVALPVIASGGIMNG 220 Query: 87 EDAAKILSFGADKISINSPALADPT 111 + A++L GA + + + L P Sbjct: 221 REIAEMLRLGASAVQLGTVFLCTPE 245 Score = 42.1 bits (98), Expect = 0.020, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 24/80 (30%), Gaps = 11/80 (13%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDL----------EQLKKVREVCHVPLIASGGAGTMEH 215 + G IV G R +D+ + + +P+IASGG Sbjct: 163 LASAGVDAIVAQGAEAGGQRGTFDVSFEEGLVPLRALVAGLANAVALPVIASGGIMNGRE 222 Query: 216 FLEAFRDADVDGALAASVFH 235 E R +VF Sbjct: 223 IAEMLR-LGASAVQLGTVFL 241 >UniRef50_C6P7F3 Ketose-bisphosphate aldolase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P7F3_9PROT Length = 410 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 51/148 (34%), Gaps = 11/148 (7%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 LE A + +S G + + +++ L + + + + E +V Sbjct: 86 DLESAERAISAGCNAVMVDTSMLPFSENLRQT-----RDIVDMAHACGVTVEGELGYVPG 140 Query: 145 YTGDESRTRVTQW---ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY---DLEQLKKVRE 198 G+ + ++ V++ G + +++ G G D +L ++RE Sbjct: 141 LEGESAAEHPGDLAYTSAVEAKAFVERTGVDCLAVSVGTVHGRMKGVPKLDYNRLTRIRE 200 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVD 226 VPL+ GG G + V Sbjct: 201 AVDVPLVIHGGTGLTDEQYRRLISHGVS 228 >UniRef50_Q1Q4L5 Similar to dihydroorotate oxidase (Dihydroorotate dehydrogenase B) catalytic subunit n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4L5_9BACT Length = 306 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 49/198 (24%), Gaps = 41/198 (20%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 +E A + + G I I P + Sbjct: 110 IEVAEGLSASGFSAIEIPLSCPHTPGFGLLSGQGTPKATYEITYAVRR---------KTN 160 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ------------- 192 + E + + GA I +N G ++E Sbjct: 161 VPIFVKISPNVPEITSIAKAAEDAGANGI--TAVNSMGPGMVINIESKKPVLGFKVGGVT 218 Query: 193 -----------LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 + V + +P+I GG T H +E A + + + IN+ Sbjct: 219 GDALRPIAVRCVYDVYQAVKIPIIGVGGISTGRHAIEMM-MAGASAVGIGTGVYTRGINV 277 Query: 242 -----GELKAYLATQGVE 254 E+K ++ G Sbjct: 278 FSKVCAEMKQWMIENGYN 295 >UniRef50_D1Z2Q9 N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Methanocella paludicola SANAE RepID=D1Z2Q9_METPS Length = 214 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 62/202 (30%), Gaps = 32/202 (15%) Query: 81 GGIKSLEDAAKILSFGADKISI---NSPALADPTLITRLADRFGVQC---IVVGIDTWYD 134 G+++ DA K + GAD + + SP +A IV+ T + Sbjct: 6 CGVRTPGDALKCVEAGADAVGMLLARSPRRITIEQAKAIAKTLPPSVRPVIVMMPSTVDE 65 Query: 135 AETGKYHVNQYTGDESRTRVTQWETL--------------------DWVQEVQKRGAGEI 174 A + + + + ++ + Sbjct: 66 AVEAAHAIQPGAIQLQGDEPPGMVAEIKRALPGTCIVKAIHVGEGRELEKAMEYEKVADA 125 Query: 175 VLNMM---NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +L N+ G +D K + P+I +GG ++ A R+ A Sbjct: 126 ILLDTMSPNRGGSGTTHDWNISKSIVASVRKPVILAGGL-NPDNVAAAVREVGPYAVDVA 184 Query: 232 SVF-HKQII-NIGELKAYLATQ 251 S + + ++ +KA++A Sbjct: 185 SGVEGEGRVKDLELVKAFIANA 206 >UniRef50_A3IFH8 Tryptophan synthase alpha chain n=2 Tax=Bacillaceae RepID=A3IFH8_9BACI Length = 264 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 56/162 (34%), Gaps = 16/162 (9%) Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 N + GV+ I+V ++ + +N ++ + V+ + Sbjct: 102 FNPVLAYGLEAFAQACVAGGVKGIIVPDVPLEESGILREALNPHS-IDVIQLVSLTSPPE 160 Query: 162 WVQEVQKRGAG---EIVLNMMNQDGVRNGYDLE-QLKKVREVCHVPLIASGGAGTMEHFL 217 + + G + +N + + +LE +R+ +P++A G T E Sbjct: 161 RITRIAAASQGFVYAVTVNGITGERSNFATNLEQHFASLRQASPIPVLAGFGISTPEQV- 219 Query: 218 EAFRDADV--DGALAAS----VFHKQIINIGELKAYLATQGV 253 + + DG + S H+ + E A++G+ Sbjct: 220 ---KSMGMLGDGVIVGSAVVTALHEGRMEAIEAL-IAASKGI 257 >UniRef50_D2RJE3 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJE3_ACIFE Length = 336 Score = 42.9 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 15/111 (13%) Query: 19 KGVQFRNHEIIGDIVPL---AKRYAEEGADELVFYDITASSD-----GRVV---DKSWVS 67 + E L + + G D + ++ G Sbjct: 227 RLGGGDYMEGGSRPEELPQAVEYLQQAGLDGIS---LSGGLCIFFRPGHPEAGYFAELSR 283 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLA 117 E IP + GGI + E A + L+ G AD I + AL D + ++ Sbjct: 284 AAKETARIPVLLTGGITTGEQAEQFLATGQADLIGLGRAALKDHQVFRKIL 334 >UniRef50_A6DTA2 Inosine-5'-monophosphate dehydrogenase n=2 Tax=Lentisphaerae RepID=A6DTA2_9BACT Length = 500 Score = 42.9 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 58/201 (28%), Gaps = 31/201 (15%) Query: 49 FYDITASSDG--RVVDKSWVSRVAEVIDI-PFCVAGGIKSLEDAAKILSFGADKISINSP 105 F+D+ A G ++ + ++ I P+ A +++ G D I I++ Sbjct: 208 FHDVNALITGTSKLENLDSKYQLRCAAAISPYDFG-------RAEALINAGVDAIVIDTA 260 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 +I + + + + G + D + Sbjct: 261 HGHSKGVIETVKEL------------KAGMGSSVDVIAGNVGTAVGAKA----LADAGAD 304 Query: 166 VQKRGAG-EIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASGGAGTMEHFLEAFRD 222 K G G + GV + + + VP+IA GG +A Sbjct: 305 AVKVGIGPGSICTTRVVCGVGV-PQITAVYEASRAVPSDVPIIADGGIKQSGDVPKAI-T 362 Query: 223 ADVDGALAASVFHKQIINIGE 243 + + + + GE Sbjct: 363 SGASSVMMGGLLAATEESPGE 383 >UniRef50_C1DXM0 Thiamine-phosphate pyrophosphorylase (TMPpyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) n=2 Tax=Aquificales RepID=C1DXM0_SULAA Length = 181 Score = 42.9 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 20/161 (12%) Query: 86 LEDAAKILSFGADKISINSPALADPTLIT------RLADRFGVQCIVVG----------I 129 L+ ++L G I I L D L ++ + + + Sbjct: 18 LDTVKEVLEKGVRLIQIREKDLPDDELYKLAESVLEISKGYDAKIFINSRVDIAYMLGLD 77 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGY 188 + + V + + + D + + GA + ++ + +G Sbjct: 78 GVHLTSRSVPVSVVKRKFPDLIVGKSCHSVEDVLNA-EDEGADYVFISPIFEVEGKGKPI 136 Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 +E LKKV EV +P+ A GG +E V G Sbjct: 137 GIEGLKKVLEVAKIPVYALGGINNSN--VEEILKTGVYGVA 175 >UniRef50_C0EUE6 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EUE6_9FIRM Length = 329 Score = 42.9 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 11/107 (10%), Positives = 32/107 (29%), Gaps = 7/107 (6%) Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 D + + V G E+ +D + E++++ ++ Sbjct: 124 FFDEVFSQVNIEVSVKTRLGVENPDE-----VIDLMNIYNAFPISEVIVHARVREDYYKR 178 Query: 188 Y-DLEQLKKVREVCHVPLIASGGAGTMEHFLEA-FRDADVDGALAAS 232 + E + + P+ +G T++ + D+ + Sbjct: 179 PVNQEAFAQCLAISKHPVCYNGDLFTVQDIENLTAKFPDIKAVMLGR 225 >UniRef50_UPI0000D55C2D PREDICTED: similar to conserved hypothetical protein n=1 Tax=Tribolium castaneum RepID=UPI0000D55C2D Length = 270 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 14/145 (9%), Positives = 48/145 (33%), Gaps = 18/145 (12%) Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV--TQWETLDWVQEVQKRGAGEIV 175 + + + + + + + + + ++ Q Q A ++ Sbjct: 134 EGYTDANAGLILRYRRQIQAENVLILADIKKKHSSHAITSDVSLVETAQAAQFFQADGLI 193 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG--TMEHFLEAFRDADVDGALAASV 233 L + + ++ +L +V++ C +P++ G + DG + S Sbjct: 194 LTGVA---TGSPANVSELSQVKKFCSLPVLVGSGVTGDNLGD------YMGADGVIVGSY 244 Query: 234 FHKQ-----IINIGELKAYLATQGV 253 F K ++ ++ ++ + + Sbjct: 245 FKKGGVWYEDVDEERVRNFMEKRKM 269 >UniRef50_B9Y366 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y366_9FIRM Length = 234 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 54/157 (34%), Gaps = 36/157 (22%) Query: 85 SLEDAAKILSFGADKISINSPALAD------PTLITRLADRFGVQCIVVGIDTWYDAETG 138 + E A +++ GAD +++++ L+ + + + I V D Sbjct: 87 TFEKAREVVEAGADILALDTRITTKRGKAELLALLHEIHETYP--HIAVMADCA------ 138 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGYDLEQLKKVR 197 T + + + G +I+ ++ G D E +++++ Sbjct: 139 --------------------TYEECRFCAESGCVDILSTTLSGLVNPIEGPDTELVRRLK 178 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + +P+ A G ++ +A +A D + Sbjct: 179 QDFTLPVNAEGRIWELKDI-DAVVEAGADMITIGTAI 214 Score = 40.2 bits (93), Expect = 0.072, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 D V R+ + +P G I L+D ++ GAD I+I + A+ P LIT Sbjct: 167 EGPDTELVRRLKQDFTLPVNAEGRIWELKDIDAVVEAGADMITIGT-AITRPHLITE 222 >UniRef50_C6Q0J2 Dihydroorotate dehydrogenase family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0J2_9CLOT Length = 360 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 + +V +A + +P GGI S EDA ++ GA + I + A+ + Sbjct: 211 NPIALRYVYSIANSVKVPVIGVGGISSGEDAVAMIMAGASAVQICTAAILE 261 >UniRef50_Q8DTK2 Putative enoyl-(Acyl-carrier-protein) reductase n=1 Tax=Streptococcus mutans RepID=Q8DTK2_STRMU Length = 327 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 9/175 (5%) Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP--ALADPTLITRLAD 118 D S VS V+E + +G +K E+ + + K S + ++ D Sbjct: 26 SDSSLVSAVSEAGGLGILASGNMK-PEEVREEIRKTKSKTSYPFGVNIIISNKFCDQIID 84 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + + + I D N + + + + + ++K GA ++ Sbjct: 85 VLHEEKVDIVITGNGDPGKFFPKFNAW----NMKVIPVVSSYMMAKRMEKLGAIAVIAEG 140 Query: 179 MNQDGVRNGYDLE-QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 M G L + + +P+IA+GG + + AF + G + Sbjct: 141 MEAGGHIGSITTMCLLPNITKDISIPVIAAGGIASGYSMMAAF-NLGAQGVQIGT 194 >UniRef50_Q2SLZ7 NADH:flavin oxidoreductase, Old Yellow Enzyme family n=5 Tax=Proteobacteria RepID=Q2SLZ7_HAHCH Length = 431 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 31/103 (30%), Gaps = 17/103 (16%) Query: 33 VPLAKRYAEEGADELVFYDIT----------------ASSDGRVVDKSWVSRVAEVIDIP 76 V +A+ + G D L + + VA+ + P Sbjct: 250 VEVARWLQQAGVDLLELSGGAYENPAFLATESDKRPAGAWRREAFFLEYAEAVAKAVTTP 309 Query: 77 FCVAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLAD 118 V GG +S ++ GA I + P DP +L Sbjct: 310 LMVTGGFRSRPGMNDAIAAGATQMIGVARPFCTDPDFPRKLFA 352 >UniRef50_C0GEC4 Thiamine monophosphate synthase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEC4_9FIRM Length = 197 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 5/79 (6%) Query: 157 WETLDWVQEVQKRGAGEIVLNMM---NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 T++ QK GA I+ + + G L ++ V +P+IA GG T Sbjct: 100 IHTIEEALTAQKLGADYIIAGNIFKTDCKPGLGGKGLSFVEAVTSSVSIPVIAIGGIST- 158 Query: 214 EHFLEAFRDADVDGALAAS 232 + A A G S Sbjct: 159 -DNVSAVIKAGAHGIAVMS 176 >UniRef50_Q5NYR5 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NYR5_AZOSE Length = 229 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 19/125 (15%) Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 +R+A + I G A+++L+ GA ++ + AL D L+ RL RFG + I Sbjct: 31 ARLASAVAIILPAEG----EARASELLAAGARRVLLGEAALRDAELVPRLVARFGAERIG 86 Query: 127 VGIDTWYDAETGKYHVN---------------QYTGDESRTRVTQWETLDWVQEVQKRGA 171 V + + + + + T W+ E++KRG Sbjct: 87 VFVPARRMEVAWSFDMVSNADFRVVTPSLCEAGWEILRADDSATDIRANWWLGEMKKRGV 146 Query: 172 GEIVL 176 ++ Sbjct: 147 SIALV 151 >UniRef50_A5ZMJ6 Thiamine-phosphate pyrophosphorylase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZMJ6_9FIRM Length = 211 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 58/182 (31%), Gaps = 25/182 (13%) Query: 90 AKILSFGADKISI------NSPALADPTLITRLADRFGVQCIVVG-IDTWYDAETGKYHV 142 ++L G + + + L + L+ + +R+ V I+ D A HV Sbjct: 30 EELLRAGVSCVQLREKNASDEEILQEAALLKEICERYNVPLIINDRPDLAQKANASGVHV 89 Query: 143 ----------NQYTGDESRTRVTQWETLDWVQEVQKRGAGEI----VLNMMNQDGVRNGY 188 Q G + + + Q GA I V + V Sbjct: 90 GLSDMGIQKARQLLGPDFIIGGSAHNVEE-ALAAQNAGADYIGCGAVFGSTTKTNVTQLP 148 Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 +E L+ + + +P++A GG L + + GA S K ++ +L Sbjct: 149 -VETLRAICQAVEIPVVAIGGVT--ADNLYLLAGSGISGAAVVSGLFKPDNKAEAVRHFL 205 Query: 249 AT 250 Sbjct: 206 TE 207 >UniRef50_A8IEL8 Glycolate oxidase n=3 Tax=Viridiplantae RepID=A8IEL8_CHLRE Length = 382 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 36 AKRYAEEGADELVFYD-----ITASSDGRVVDKSWVSRVAE-VIDIPFCVAGGIKSLEDA 89 A+ + G D +V + + + G + + V+ V IP V GG++ D Sbjct: 243 AELAVQYGVDGIVVSNHGGRQLDYAPSGLHMLPAVVAAVRGCGSSIPVLVDGGVRRGTDV 302 Query: 90 AKILSFGADKISINSPALADPTLITRL 116 K L+ GA + + P L + + Sbjct: 303 IKALALGASGVLLGRPVLYGLAVGGQA 329 >UniRef50_A8MDA4 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=GGGPS_CALMQ Length = 267 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 3/85 (3%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAA 90 IV A G + + + + V S V++V + + V GGIKS E A Sbjct: 157 IVAYALAAYYMGFSAIYLEAGSGARE--PVPSSVVAKVKRAVRNKILMVGGGIKSPEAAY 214 Query: 91 KILSFGADKISINSPALADPTLITR 115 I GAD I + P ++ + Sbjct: 215 SIALAGADVIITGTVIEESPAVVLK 239 >UniRef50_C1XX24 Fructose-bisphosphate aldolase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XX24_9DEIN Length = 316 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 67/222 (30%), Gaps = 15/222 (6%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGAD-ELVFYDITASSDGRVVDKSWVSRVAE 71 R+G V N E I+ A E GA L D G + V +A Sbjct: 15 REGYAVPSFNTNNLETTQAILETA---EEVGAPVFLQISDGARKYAGLENLANLVRDMAS 71 Query: 72 VIDIPFCV--AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + +P + G + L G + I++ + V Sbjct: 72 RVSVPVVLHLDHG-ADYTMVLQALRAGFTSVMIDASHHPFEENVAETRRCVEAAHAVG-- 128 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-- 187 +AE G+ + + + + V + G + + + G G Sbjct: 129 -VSVEAELGRLQGIEDNIAVDEREAFLTDPEEAQRFVAETGIDYLAVAIGTSHGAYKGKG 187 Query: 188 ---YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 D +L+++ +PL+ G +G + + R D Sbjct: 188 RPYIDHARLQQIARRVSLPLVLHGSSGVPQWLKDKMRATGAD 229 >UniRef50_B0GA01 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0GA01_9FIRM Length = 338 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 6/93 (6%) Query: 30 GDIVPLAK---RYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 D A+ Y + +EL+ + + E IP C G I + Sbjct: 139 DDPEEFARLLDIYNQYPVEELIIHPRVQKDFYKNQPNLGAFHDAVEESKIPLCYNGDIFT 198 Query: 86 LEDAAKILSF--GADKISINSPALADPTLITRL 116 E ++ D + L +P L+ + Sbjct: 199 PESYEEMKREFPQVDTFMLGRGILMNPALLDLI 231 >UniRef50_Q3MD83 FMN-dependent alpha-hydroxy acid dehydrogenase n=7 Tax=Cyanobacteria RepID=Q3MD83_ANAVT Length = 366 Score = 42.9 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 7/77 (9%) Query: 36 AKRYAEEGADELVFYD-----ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 A R E GA +V + + + V+ V + + GGI+ D Sbjct: 247 AARAVEYGAKAIVVSNHGGRQLDGAIASLDALPEIVAAVNGKAE--VLLDGGIRRGTDII 304 Query: 91 KILSFGADKISINSPAL 107 K L+ GA + I P L Sbjct: 305 KALAIGAQAVLIGRPIL 321 >UniRef50_B8KT97 NADH:flavin oxidoreductase, old yellow enzyme family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KT97_9GAMM Length = 482 Score = 42.9 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 61 VDKSWVSRVAEVI-----DIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLIT 114 + V+ + + + + P VAGGI + A ++L AD I+ ALADP Sbjct: 363 RNVEPVAAIRQRVRDSGFETPIVVAGGIYGFDQAERLLREERADVIAFARQALADPDWFE 422 Query: 115 RLADRFGVQCIVVGIDTWYDAETGK 139 ++ G + IV + + K Sbjct: 423 KVRTGHGDEVIVCRYSNYCEGLDQK 447 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B2V9M8 Imidazole glycerol phosphate synthase subunit hi... 234 3e-60 UniRef50_Q12UY6 Imidazole glycerol phosphate synthase subunit hi... 230 3e-59 UniRef50_C7P985 Imidazole glycerol phosphate synthase subunit hi... 230 3e-59 UniRef50_B0TDM7 Imidazole glycerol phosphate synthase subunit hi... 230 4e-59 UniRef50_A6UUZ9 Imidazole glycerol phosphate synthase subunit hi... 225 1e-57 UniRef50_C4L176 Imidazole glycerol phosphate synthase subunit hi... 224 2e-57 UniRef50_C9KKW6 Imidazole glycerol phosphate synthase subunit hi... 222 7e-57 UniRef50_B9DIP1 Imidazole glycerol phosphate synthase subunit hi... 213 5e-54 UniRef50_Q8DJN7 Imidazole glycerol phosphate synthase subunit hi... 212 1e-53 UniRef50_Q1PWX6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 211 2e-53 UniRef50_B8FFL4 Imidazole glycerol phosphate synthase subunit hi... 210 3e-53 UniRef50_B5YIB7 Imidazole glycerol phosphate synthase subunit hi... 210 4e-53 UniRef50_A5FQU7 Histidine biosynthesis protein n=5 Tax=Dehalococ... 209 9e-53 UniRef50_Q18JI3 Imidazole glycerol phosphate synthase subunit hi... 208 1e-52 UniRef50_A0AG16 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 207 3e-52 UniRef50_A2BQT3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 207 4e-52 UniRef50_A8M910 Imidazole glycerol phosphate synthase subunit hi... 206 7e-52 UniRef50_B8D115 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 205 1e-51 UniRef50_C4FS06 Putative uncharacterized protein n=1 Tax=Veillon... 205 1e-51 UniRef50_C0Z6P5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 205 1e-51 UniRef50_Q3ZYM9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 205 2e-51 UniRef50_B1I557 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 204 2e-51 UniRef50_C4Z0A8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 204 3e-51 UniRef50_C7RAI6 Imidazole glycerol phosphate synthase subunit hi... 204 3e-51 UniRef50_D2RTG3 Phosphoribosylformimino-5-aminoimidazole carboxa... 203 4e-51 UniRef50_C0RFX3 Imidazole glycerol phosphate synthase subunit hi... 203 4e-51 UniRef50_Q02YX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 203 4e-51 UniRef50_B4S4Z8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 203 5e-51 UniRef50_C4ZLR4 Imidazole glycerol phosphate synthase subunit hi... 203 5e-51 UniRef50_B3DY29 Phosphoribosylformimino-5-aminoimidazole carboxa... 202 7e-51 UniRef50_B5YIB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 202 1e-50 UniRef50_P74106 Imidazole glycerol phosphate synthase subunit hi... 202 1e-50 UniRef50_C9RKR3 Imidazole glycerol phosphate synthase subunit hi... 201 2e-50 UniRef50_C0QRW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 200 3e-50 UniRef50_Q0IDQ9 Imidazole glycerol phosphate synthase subunit hi... 200 3e-50 UniRef50_Q12WC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 200 3e-50 UniRef50_Q18C71 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 200 5e-50 UniRef50_B2V6T1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 199 6e-50 UniRef50_C8PKX5 Imidazole glycerol phosphate synthase subunit hi... 199 6e-50 UniRef50_Q3AD49 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 199 7e-50 UniRef50_B0TY42 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 199 9e-50 UniRef50_D1CF74 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 198 1e-49 UniRef50_Q2P3J8 Imidazole glycerol phosphate synthase subunit hi... 197 2e-49 UniRef50_B8FP23 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 197 3e-49 UniRef50_B3QRR1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 197 4e-49 UniRef50_Q1R079 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 197 4e-49 UniRef50_P62353 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 197 4e-49 UniRef50_A5INE6 Imidazole glycerol phosphate synthase subunit hi... 196 8e-49 UniRef50_Q2SCV5 Imidazoleglycerol-phosphate synthase n=1 Tax=Hah... 195 1e-48 UniRef50_Q2JK82 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 195 1e-48 UniRef50_A2C5V2 Imidazoleglycerol-phosphate synthase n=2 Tax=Pro... 195 1e-48 UniRef50_A3CNT1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 195 1e-48 UniRef50_Q2LTH2 Imidazole glycerol phosphate synthase, cyclase s... 195 2e-48 UniRef50_A4XL21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 194 2e-48 UniRef50_C5BV99 Imidazole glycerol phosphate synthase subunit hi... 194 3e-48 UniRef50_A4G9I7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 194 3e-48 UniRef50_A9A5X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 193 5e-48 UniRef50_Q8DMA5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 193 6e-48 UniRef50_Q65EG2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 192 8e-48 UniRef50_B9E171 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 192 9e-48 UniRef50_A3EUM5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 192 1e-47 UniRef50_C0W9Y4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 191 1e-47 UniRef50_D1U7I5 Histidine biosynthesis protein n=1 Tax=Desulfovi... 191 2e-47 UniRef50_Q4FNT6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 190 3e-47 UniRef50_D0LIZ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 190 3e-47 UniRef50_Q3SPZ7 Histidine biosynthesis n=1 Tax=Nitrobacter winog... 189 9e-47 UniRef50_A7I1W6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 189 9e-47 UniRef50_A1W0U8 Putative imidazole glycerol phosphate synthase s... 189 1e-46 UniRef50_B2A6X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 188 1e-46 UniRef50_A1KJ21 Imidazole glycerol phosphate synthase subunit hi... 188 1e-46 UniRef50_P72139 Putative imidazole glycerol phosphate synthase s... 188 1e-46 UniRef50_C9KKW7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 188 2e-46 UniRef50_B8J249 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 188 2e-46 UniRef50_A6Q4V9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 187 3e-46 UniRef50_Q18DL2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 187 3e-46 UniRef50_P62356 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 187 3e-46 UniRef50_B6BGE0 Imidazole glycerol phosphate synthase, cyclase s... 187 4e-46 UniRef50_Q2S296 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 186 4e-46 UniRef50_UPI0001C41EB6 phosphoribosylformimino-5- aminoimidazole... 186 5e-46 UniRef50_A0M284 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 186 5e-46 UniRef50_Q4JW54 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 186 5e-46 UniRef50_Q6KZD5 Histidine biosynthesis protein HisF n=1 Tax=Picr... 186 6e-46 UniRef50_B0K628 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 186 6e-46 UniRef50_Q0AW40 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 186 6e-46 UniRef50_C6UMW6 Putative imidazoleglycerol phosphate synthase, c... 185 1e-45 UniRef50_B1H0E7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 185 2e-45 UniRef50_Q58927 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 184 2e-45 UniRef50_B3E201 Histidine biosynthesis protein n=1 Tax=Geobacter... 184 2e-45 UniRef50_A8ESN1 Imidazoleglycerol phosphate synthase, cyclase su... 184 2e-45 UniRef50_D0MJ01 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 184 3e-45 UniRef50_Q47XB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 183 4e-45 UniRef50_B2UX21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 183 5e-45 UniRef50_B0T799 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 183 5e-45 UniRef50_Q7UG70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 183 5e-45 UniRef50_C9RH20 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 183 5e-45 UniRef50_B8FJR2 Histidine biosynthesis protein n=1 Tax=Desulfati... 183 7e-45 UniRef50_B1CBX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 183 7e-45 UniRef50_D2Q1W2 Bifunctional HisA/TrpF protein n=2 Tax=Actinomyc... 182 8e-45 UniRef50_D1B9F8 Histidine biosynthesis protein n=1 Tax=Thermanae... 182 8e-45 UniRef50_UPI0001C3165B phosphoribosylformimino-5-aminoimidazole ... 182 1e-44 UniRef50_D0RQP1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 181 2e-44 UniRef50_C2BYH3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 180 3e-44 UniRef50_UPI00016BFDF6 putative 1-(5-phosphoribosyl)-5- n=1 Tax=... 180 4e-44 UniRef50_C5BRY3 Imidazoleglycerol phosphate synthase, cyclase su... 180 4e-44 UniRef50_A7FJH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 180 5e-44 UniRef50_A3N3W4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 179 6e-44 UniRef50_B8IPH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 179 1e-43 UniRef50_B9KXJ4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 179 1e-43 UniRef50_C1TLB3 Phosphoribosylformimino-5-aminoimidazole carboxa... 178 1e-43 UniRef50_C0QWR6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 178 2e-43 UniRef50_A6T0B3 Imidazoleglycerol phosphate synthase n=4 Tax=Pro... 178 2e-43 UniRef50_A6C5Q1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 177 3e-43 UniRef50_C7PAV4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 177 3e-43 UniRef50_B0R4B2 Imidazole glycerol phosphate synthase subunit hi... 176 5e-43 UniRef50_B1YL10 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 176 8e-43 UniRef50_Q7N8D1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 176 8e-43 UniRef50_A7H5V3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 175 9e-43 UniRef50_A6LDI6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 175 1e-42 UniRef50_C0BNI2 Histidine biosynthesis protein n=1 Tax=Flavobact... 175 1e-42 UniRef50_D1BQK4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 175 1e-42 UniRef50_A8S9L9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 175 2e-42 UniRef50_B4SDB6 Histidine biosynthesis protein n=9 Tax=Bacteria ... 174 2e-42 UniRef50_A3CTR9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 174 3e-42 UniRef50_C4G189 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 173 4e-42 UniRef50_A2C1S3 Imidazole glycerol-phosphate synthase n=1 Tax=Pr... 173 4e-42 UniRef50_B4W8G6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 172 8e-42 UniRef50_Q5NMD5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 171 1e-41 UniRef50_Q7V958 Putative imidazole glycerol phosphate synthase s... 171 2e-41 UniRef50_Q88UE2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 171 2e-41 UniRef50_A1ZT22 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 171 2e-41 UniRef50_Q039B4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 171 2e-41 UniRef50_Q1IWD2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 171 2e-41 UniRef50_C7H029 Imidazoleglycerol phosphate synthase, cyclase su... 171 2e-41 UniRef50_Q7MPK7 Putative imidazole glycerol phosphate synthase s... 171 3e-41 UniRef50_C1CY68 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 170 6e-41 UniRef50_O29276 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 170 6e-41 UniRef50_C8WPG6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 169 7e-41 UniRef50_Q5WX95 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 168 1e-40 UniRef50_C7TCJ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 168 1e-40 UniRef50_Q3ICF4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 168 1e-40 UniRef50_D1Y7T0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 167 3e-40 UniRef50_P33734 Cyclase n=51 Tax=cellular organisms RepID=HIS5_Y... 167 3e-40 UniRef50_C6UMW5 Putative phosphoribosylformimino-5-aminoimidazol... 166 6e-40 UniRef50_A8ZUC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 166 6e-40 UniRef50_Q67KH9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 166 7e-40 UniRef50_Q056S8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 166 8e-40 UniRef50_A7H8C3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 166 8e-40 UniRef50_B2I5X7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 165 1e-39 UniRef50_P59520 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 165 1e-39 UniRef50_C5E2I9 KLTH0H05368p n=17 Tax=cellular organisms RepID=C... 165 1e-39 UniRef50_A3HVE8 Phosphoribosylformimino-5-aminoimidazole carboxa... 165 1e-39 UniRef50_D0CY30 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 165 2e-39 UniRef50_A7FU80 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 165 2e-39 UniRef50_B6YWA8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 164 2e-39 UniRef50_C6N0X3 Phosphoribosylformimino-5-aminoimidazole carboxa... 164 3e-39 UniRef50_Q12NS9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 164 3e-39 UniRef50_Q7VQW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 163 5e-39 UniRef50_C4L175 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 163 6e-39 UniRef50_Q1GHT0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 163 7e-39 UniRef50_C4R8P0 Imidazole glycerol phosphate synthase (Glutamine... 162 9e-39 UniRef50_C6Y3G6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 161 2e-38 UniRef50_C8WUX9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 161 2e-38 UniRef50_D1RFK6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 161 2e-38 UniRef50_Q6SHC0 Imidazoleglycerol phosphate synthase, cyclase su... 160 3e-38 UniRef50_B9K9S2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 160 3e-38 UniRef50_Q1AX07 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 160 4e-38 UniRef50_B4U8M5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 160 4e-38 UniRef50_B0SDS6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 159 8e-38 UniRef50_Q7MPP3 Putative imidazole glycerol phosphate synthase s... 159 1e-37 UniRef50_A4EBZ6 Putative uncharacterized protein n=2 Tax=Collins... 159 1e-37 UniRef50_B1ZW12 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 158 1e-37 UniRef50_C7GBG4 Imidazoleglycerol phosphate synthase, cyclase su... 158 2e-37 UniRef50_Q058A3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 158 2e-37 UniRef50_D1B860 Histidine biosynthesis protein n=1 Tax=Thermanae... 156 5e-37 UniRef50_B5YE89 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 153 4e-36 UniRef50_A7SPR8 Predicted protein n=1 Tax=Nematostella vectensis... 153 4e-36 UniRef50_C6XVQ0 Histidine biosynthesis protein n=1 Tax=Pedobacte... 153 6e-36 UniRef50_C2FZQ4 Possible isomerase n=2 Tax=Sphingobacterium spir... 152 1e-35 UniRef50_A1ZVN4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 151 2e-35 UniRef50_Q0AP83 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 151 3e-35 UniRef50_B9U3E3 HisA n=1 Tax=Taylorella equigenitalis RepID=B9U3... 150 4e-35 UniRef50_A0LAC8 Imidazole glycerol phosphate synthase subunit hi... 150 4e-35 UniRef50_C1FJN8 Predicted protein n=13 Tax=cellular organisms Re... 149 8e-35 UniRef50_Q8TYD6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 149 1e-34 UniRef50_A3UE29 HisF (Cyclase) n=1 Tax=Oceanicaulis alexandrii H... 148 2e-34 UniRef50_D2L5A7 Histidine biosynthesis protein n=1 Tax=Desulfovi... 148 2e-34 UniRef50_B9WJS1 Imidazole glycerol phosphate synthase [includes:... 148 2e-34 UniRef50_A5INE5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 147 3e-34 UniRef50_D2NNQ2 Phosphoribosylformimino-5-aminoimidazole carboxa... 147 4e-34 UniRef50_A1WSE3 Histidine biosynthesis n=1 Tax=Verminephrobacter... 146 5e-34 UniRef50_Q1N2Y7 HisF protein n=1 Tax=Bermanella marisrubri RepID... 146 7e-34 UniRef50_A8A8V9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 146 8e-34 UniRef50_Q5KNA0 Imidazoleglycerol phosphate synthase, putative n... 146 9e-34 UniRef50_Q2N6D2 Imidazoleglycerol-phosphate synthase, cyclase su... 145 1e-33 UniRef50_C9YDK8 Imidazole glycerol phosphate synthase subunit hi... 144 2e-33 UniRef50_A2BSD9 Putative uncharacterized protein n=1 Tax=Prochlo... 142 1e-32 UniRef50_Q2YZ70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 140 5e-32 UniRef50_B6BR00 Imidazole glycerol phosphate synthase subunit Hi... 139 9e-32 UniRef50_B8LDL7 N-acetyl-glutamate-gamma-semialdehyde dehydrogen... 138 1e-31 UniRef50_A6Y2G9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 137 4e-31 UniRef50_Q01ZU7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 136 5e-31 UniRef50_Q062W6 Putative cyclase hisF n=1 Tax=Synechococcus sp. ... 136 8e-31 UniRef50_A9NE09 tRNA-dihydrouridine synthase n=2 Tax=Mollicutes ... 135 1e-30 UniRef50_C2G0W0 Possible imidazoleglycerol-phosphate synthase Hi... 133 5e-30 UniRef50_Q7WYR2 Imidazole glycerol phosphate synthase, subunit H... 130 3e-29 UniRef50_C0WXE8 Imidazole glycerol phosphate synthase n=2 Tax=La... 130 4e-29 UniRef50_D2RLJ7 TIM-barrel protein, nifR3 family n=1 Tax=Acidami... 130 4e-29 UniRef50_D1BLD4 TIM-barrel protein, nifR3 family n=12 Tax=cellul... 130 5e-29 UniRef50_Q2RZL4 NifR3 family enzyme n=2 Tax=Rhodothermaceae RepI... 129 1e-28 UniRef50_A9A4W7 Putative TIM-barrel protein, nifR3 family n=1 Ta... 128 1e-28 UniRef50_C6JNK3 Dihydrouridine-tRNA ligase n=4 Tax=Fusobacterium... 128 2e-28 UniRef50_A4YI32 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 128 2e-28 UniRef50_Q8ZY14 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 128 2e-28 UniRef50_UPI000038E352 1-(5-phosphoribosyl)-5-[(5-phosphoribosyl... 128 3e-28 UniRef50_A0Q6L0 TRNA-dihydrouridine synthase n=19 Tax=Francisell... 127 4e-28 UniRef50_B7GFK6 tRNA-dihydrouridine synthase n=211 Tax=Bacteria ... 127 4e-28 UniRef50_Q6F288 TRNA dihydrouridine synthetase n=3 Tax=Mollicute... 127 4e-28 UniRef50_Q1D4M2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 126 5e-28 UniRef50_C0WDP2 Putative uncharacterized protein n=1 Tax=Acidami... 126 6e-28 UniRef50_C7NHA2 Phosphoribosylformimino-5-aminoimidazole carboxa... 126 7e-28 UniRef50_D0U4P6 tRNA-dihydrouridine synthase n=2 Tax=uncultured ... 126 8e-28 UniRef50_Q7U923 Putative imidazole glycerol phosphate synthase s... 126 9e-28 UniRef50_Q6KZD4 Phosphoribosylformimino-5-aminoimidazole carboxa... 126 1e-27 UniRef50_A7S213 Predicted protein n=1 Tax=Nematostella vectensis... 125 1e-27 UniRef50_P37567 Probable tRNA-dihydrouridine synthase 1 n=19 Tax... 125 1e-27 UniRef50_B8FGI4 TIM-barrel protein, nifR3 family n=1 Tax=Desulfa... 125 2e-27 UniRef50_Q6SFW7 NifR3/Smm1 family protein n=1 Tax=uncultured mar... 125 2e-27 UniRef50_B3QWF2 TIM-barrel protein, nifR3 family n=26 Tax=Bacter... 125 2e-27 UniRef50_A9KHE5 TIM-barrel protein, nifR3 family n=2 Tax=Clostri... 124 3e-27 UniRef50_Q58114 Uncharacterized protein MJ0703 n=8 Tax=Methanoco... 124 4e-27 UniRef50_Q3AZ67 Dihydrouridine synthase TIM-barrel protein nifR3... 124 4e-27 UniRef50_C7LZ82 Histidine biosynthesis protein n=1 Tax=Acidimicr... 123 4e-27 UniRef50_C1FNC8 Dihydrouridine synthase n=35 Tax=cellular organi... 123 5e-27 UniRef50_C8W3U6 TIM-barrel protein, nifR3 family n=8 Tax=Clostri... 123 6e-27 UniRef50_Q55724 Probable tRNA-dihydrouridine synthase 1 n=34 Tax... 123 7e-27 UniRef50_C4Z9L8 tRNA-dihydrouridine synthase n=26 Tax=Firmicutes... 123 7e-27 UniRef50_O33772 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 123 7e-27 UniRef50_C7RAI7 Phosphoribosyl-ATP diphosphatase n=1 Tax=Kangiel... 123 7e-27 UniRef50_D2MLS1 TIM-barrel protein, nifR3 family n=1 Tax=Bulleid... 122 1e-26 UniRef50_C9KMX2 tRNA-dihydrouridine synthase n=3 Tax=Veillonella... 122 1e-26 UniRef50_C9XSF8 tRNA-dihydrouridine synthase n=24 Tax=Clostridia... 122 1e-26 UniRef50_C1F4Z7 Putative tRNA-dihydrouridine synthase n=1 Tax=Ac... 122 1e-26 UniRef50_Q1RH84 Probable tRNA-dihydrouridine synthase n=59 Tax=A... 121 2e-26 UniRef50_C1ZDL9 Putative TIM-barrel protein, nifR3 family n=1 Ta... 121 2e-26 UniRef50_Q0BSS6 tRNA-dihydrouridine synthase n=15 Tax=Alphaprote... 120 4e-26 UniRef50_B0VH62 Dihydrouridine synthase family protein n=1 Tax=C... 120 4e-26 UniRef50_B8GW86 tRNA-dihydrouridine synthase n=7 Tax=Alphaproteo... 120 4e-26 UniRef50_D1SND3 HisA/hisF family protein n=1 Tax=Methanocaldococ... 120 4e-26 UniRef50_A6NW05 Putative uncharacterized protein n=1 Tax=Bactero... 120 5e-26 UniRef50_Q31II6 Dihydrouridine synthase n=1 Tax=Thiomicrospira c... 120 5e-26 UniRef50_C7H613 tRNA-dihydrouridine synthase n=3 Tax=Ruminococca... 120 5e-26 UniRef50_Q1PLA2 Putative cyclase hisF n=1 Tax=uncultured Prochlo... 119 6e-26 UniRef50_Q3A324 Dihydrouridine synthase n=10 Tax=Desulfuromonada... 119 6e-26 UniRef50_Q3JEF8 Histidine biosynthesis n=2 Tax=Nitrosococcus oce... 119 7e-26 UniRef50_Q4JIN2 Orf17 n=1 Tax=uncultured bacterium BAC10-10 RepI... 119 7e-26 UniRef50_Q7ZWS1 tRNA-dihydrouridine synthase 3-like n=3 Tax=Xeno... 119 7e-26 UniRef50_A6DPY9 Putative uncharacterized protein n=1 Tax=Lentisp... 119 8e-26 UniRef50_C7RGQ7 TIM-barrel protein, nifR3 family n=4 Tax=Anaeroc... 119 9e-26 UniRef50_D0NNQ3 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 119 1e-25 UniRef50_A8ZYE4 Putative TIM-barrel protein, nifR3 family n=1 Ta... 119 1e-25 UniRef50_Q1IVR5 Dihydrouridine synthase TIM-barrel protein nifR3... 118 1e-25 UniRef50_B0TBQ2 Dihydrouridine synthase tim-barrel nifr3 family ... 118 2e-25 UniRef50_UPI0001BC5FF0 nitrogen regulation protein NIFR3 n=1 Tax... 118 2e-25 UniRef50_C8W6Y9 TIM-barrel protein, nifR3 family n=1 Tax=Atopobi... 118 2e-25 UniRef50_B6W908 Putative uncharacterized protein n=1 Tax=Anaeroc... 118 3e-25 UniRef50_A8V5Z6 Phosphoribosylformimino-5-aminoimidazole carboxa... 118 3e-25 UniRef50_Q9KV66 tRNA-dihydrouridine synthase B n=56 Tax=Proteoba... 117 3e-25 UniRef50_Q5FMA1 Transcriptional regulator n=14 Tax=Firmicutes Re... 117 3e-25 UniRef50_C1A3V7 Putative tRNA-dihydrouridine synthase n=1 Tax=Ge... 117 4e-25 UniRef50_B2ULM0 TIM-barrel protein, nifR3 family n=3 Tax=Verruco... 117 4e-25 UniRef50_B2A3T5 TIM-barrel protein, nifR3 family n=1 Tax=Natrana... 117 4e-25 UniRef50_D0LJX3 TIM-barrel protein, nifR3 family n=1 Tax=Haliang... 117 5e-25 UniRef50_B1ZWU6 TIM-barrel protein, nifR3 family n=6 Tax=Verruco... 116 5e-25 UniRef50_Q54CU9 tRNA-dihydrouridine synthase 3-like n=1 Tax=Dict... 116 5e-25 UniRef50_Q2LR94 TRNA-dihydrouridine synthase n=2 Tax=Deltaproteo... 116 6e-25 UniRef50_C7PIH0 TIM-barrel protein, nifR3 family n=7 Tax=Bactero... 116 8e-25 UniRef50_UPI00017B0A55 UPI00017B0A55 related cluster n=1 Tax=Tet... 116 9e-25 UniRef50_Q582L4 TRNA-dihydrouridine synthase 3, putative n=5 Tax... 116 1e-24 UniRef50_Q1IKB1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 115 1e-24 UniRef50_C0GJW0 TIM-barrel protein, nifR3 family n=1 Tax=Dethiob... 115 1e-24 UniRef50_Q5CSA9 Dus1p, tRNA dihydrouridine synthase (Fragment) n... 115 2e-24 UniRef50_UPI0000D52F94 Dihydrouridine synthase TIM-barrel protei... 115 2e-24 UniRef50_D0L1E3 TIM-barrel protein, nifR3 family n=1 Tax=Halothi... 115 2e-24 UniRef50_B6YQB2 tRNA-dihydrouridine synthase n=36 Tax=Bacteria R... 114 2e-24 UniRef50_C1E1T8 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 114 2e-24 UniRef50_UPI000058804E PREDICTED: similar to MGC53781 protein n=... 114 2e-24 UniRef50_D1R8P9 Putative uncharacterized protein n=1 Tax=Parachl... 114 2e-24 UniRef50_C2D6C5 Possible tRNA-dihydrouridine synthase n=1 Tax=At... 114 2e-24 UniRef50_B9NQS6 NifR3 family protein n=3 Tax=Rhodobacteraceae Re... 114 3e-24 UniRef50_A8N483 Putative uncharacterized protein n=2 Tax=Agarica... 114 3e-24 UniRef50_Q88DK5 tRNA-dihydrouridine synthase B n=460 Tax=Proteob... 114 3e-24 UniRef50_Q2RTR9 Dihydrouridine synthase TIM-barrel protein nifR3... 114 3e-24 UniRef50_A8PRW0 Putative uncharacterized protein n=1 Tax=Malasse... 114 3e-24 UniRef50_A8M908 Histidine biosynthesis protein n=1 Tax=Caldivirg... 113 4e-24 UniRef50_UPI000186DAF4 tRNA-dihydrouridine synthase, putative n=... 113 5e-24 UniRef50_A0M6M9 TRNA-dihydrouridine synthase n=16 Tax=Bacteroide... 113 5e-24 UniRef50_UPI0001C41F9C hisA/hisF family protein HisAF n=1 Tax=Me... 113 5e-24 UniRef50_Q4J8J0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 113 5e-24 UniRef50_Q1Q3Q8 Strongly similar to tRNA-dihydrouridine synthase... 113 6e-24 UniRef50_Q5M689 Possible transcriptional regulator n=25 Tax=Stre... 113 6e-24 UniRef50_O26765 Phosphoribosylformimino-5-aminoimidazole carboxa... 113 6e-24 UniRef50_A0LJ96 Putative TIM-barrel protein, nifR3 family n=1 Ta... 113 6e-24 UniRef50_Q9RDC6 Putative uncharacterized protein SCO2497 n=4 Tax... 113 8e-24 UniRef50_Q14SX5 Putative dihydrouridine synthase n=6 Tax=Clostri... 113 9e-24 UniRef50_C8WHM7 TIM-barrel protein, nifR3 family n=2 Tax=Corioba... 112 1e-23 UniRef50_B0UHM8 TIM-barrel protein, nifR3 family n=6 Tax=Rhizobi... 112 1e-23 UniRef50_B9MMW4 TIM-barrel protein, nifR3 family n=3 Tax=Clostri... 112 2e-23 UniRef50_UPI000194DF67 PREDICTED: dihydrouridine synthase 3-like... 111 2e-23 UniRef50_C9RDL3 HisA/hisF family protein n=3 Tax=Methanococcales... 111 2e-23 UniRef50_B9JW92 Nitrogen regulation protein n=4 Tax=Rhizobiales ... 111 2e-23 UniRef50_A8NZY7 tRNA-dihydrouridine synthase 3 n=2 Tax=Agaricale... 111 2e-23 UniRef50_C1ZGV0 tRNA-dihydrouridine synthase n=1 Tax=Planctomyce... 111 2e-23 UniRef50_B9JF02 tRNA-dihydrouridine synthase protein n=12 Tax=Al... 111 2e-23 UniRef50_Q090Q9 TRNA-dihydrouridine synthase B n=2 Tax=Cystobact... 111 2e-23 UniRef50_UPI00016C36C9 phosphoribosylformimino-5-aminoimidazole ... 111 2e-23 UniRef50_Q6MRF1 Transcription regulator homolog yacF n=1 Tax=Bde... 111 3e-23 UniRef50_A5UNR3 ProFAR isomerase-related protein n=3 Tax=Methano... 111 3e-23 UniRef50_Q1NTJ9 Histidine biosynthesis n=1 Tax=delta proteobacte... 111 3e-23 UniRef50_Q0F181 Dihydrouridine synthase TIM-barrel protein nifR3... 110 4e-23 UniRef50_C5WE57 tRNA-dihydrouridine synthase n=42 Tax=Streptococ... 110 4e-23 UniRef50_D2NNX0 tRNA-dihydrouridine synthase n=3 Tax=Actinobacte... 110 5e-23 UniRef50_Q1NXZ7 Dihydrouridine synthase TIM-barrel protein nifR3... 110 5e-23 UniRef50_A6CBK4 Predicted TIM-barrel enzyme, possibly dehydrogen... 110 5e-23 UniRef50_A6BZR9 Predicted TIM-barrel enzyme, possibly dehydrogen... 110 6e-23 UniRef50_Q8PX79 NifR3-like protein n=3 Tax=Methanosarcina RepID=... 110 6e-23 UniRef50_C2KYD0 Dihydrouridine synthase n=4 Tax=Bacteria RepID=C... 110 6e-23 UniRef50_A5FL15 tRNA-dihydrouridine synthase B-like protein n=14... 109 7e-23 UniRef50_Q96G46 tRNA-dihydrouridine synthase 3-like n=17 Tax=Coe... 109 9e-23 UniRef50_C0QKE4 Dhs2 n=1 Tax=Desulfobacterium autotrophicum HRM2... 109 9e-23 UniRef50_B8GCQ5 TIM-barrel protein, nifR3 family n=6 Tax=Chlorof... 109 1e-22 UniRef50_D2U2K4 tRNA-dihydrouridine synthase B n=1 Tax=Arsenopho... 109 1e-22 UniRef50_A6C0W3 HisA/HisF family protein, putative n=1 Tax=Planc... 109 1e-22 UniRef50_B3RKU4 Putative uncharacterized protein n=2 Tax=Metazoa... 108 1e-22 UniRef50_Q54XQ6 tRNA-dihydrouridine synthase 1-like protein n=1 ... 108 1e-22 UniRef50_C0W327 Dihydrouridine synthase n=2 Tax=Actinomyces RepI... 108 1e-22 UniRef50_A2CB98 Putative uncharacterized protein n=1 Tax=Prochlo... 108 2e-22 UniRef50_B9ZKT6 TIM-barrel protein, nifR3 family n=1 Tax=Thioalk... 108 2e-22 UniRef50_D2R6Z1 TIM-barrel protein, nifR3 family n=3 Tax=Plancto... 108 2e-22 UniRef50_B5X496 tRNA-dihydrouridine synthase 3-like n=3 Tax=Euka... 108 2e-22 UniRef50_O95620 tRNA-dihydrouridine synthase 4-like n=40 Tax=Met... 108 2e-22 UniRef50_O67533 Probable tRNA-dihydrouridine synthase n=1 Tax=Aq... 108 2e-22 UniRef50_P44965 tRNA-dihydrouridine synthase B n=20 Tax=Pasteure... 108 2e-22 UniRef50_B1LWM8 TIM-barrel protein, nifR3 family n=1 Tax=Methylo... 108 3e-22 UniRef50_A8J121 Predicted protein n=1 Tax=Chlamydomonas reinhard... 107 3e-22 UniRef50_A0EG06 Chromosome undetermined scaffold_94, whole genom... 107 4e-22 UniRef50_Q91XI1 tRNA-dihydrouridine synthase 3-like n=12 Tax=Cho... 107 4e-22 UniRef50_C6XJQ7 Dihydrouridine synthase DuS n=2 Tax=Hyphomonadac... 107 4e-22 UniRef50_Q6MNE9 Nitrogen regulation protein nifR3 n=1 Tax=Bdello... 107 4e-22 UniRef50_B7PPV8 tRNA-dihydrouridine synthase, putative n=1 Tax=I... 107 4e-22 UniRef50_Q7PVV7 AGAP009171-PA (Fragment) n=3 Tax=Endopterygota R... 107 5e-22 UniRef50_Q7X346 Putative uncharacterized protein n=1 Tax=uncultu... 107 5e-22 UniRef50_C3MBL4 tRNA-dihydrouridine synthase n=1 Tax=Rhizobium s... 107 5e-22 UniRef50_Q2RM54 Dihydrouridine synthase TIM-barrel protein nifR3... 107 5e-22 UniRef50_Q54ES7 tRNA-dihydrouridine synthase 4-like protein n=1 ... 106 5e-22 UniRef50_P41504 Probable tRNA-dihydrouridine synthase n=93 Tax=A... 106 5e-22 UniRef50_A0Z0J5 TRNA-dihydrouridine synthase B n=2 Tax=unclassif... 106 6e-22 UniRef50_A3VWV8 TRNA-dihydrouridine synthase, putative n=4 Tax=R... 106 8e-22 UniRef50_C1E909 tRNA-dihydrouridine synthase (Fragment) n=2 Tax=... 106 9e-22 UniRef50_D2RA64 TIM-barrel protein, nifR3 family n=5 Tax=Actinob... 106 1e-21 UniRef50_Q9XVN8 Protein F36A2.2, partially confirmed by transcri... 106 1e-21 UniRef50_A9GW95 Dihydrouridine synthase TIM-barrel protein nifR3... 105 1e-21 UniRef50_C6PST5 Dihydrouridine synthase DuS n=1 Tax=Clostridium ... 105 1e-21 UniRef50_Q5KC68 tRNA-dihydrouridine synthase 3 n=2 Tax=Filobasid... 105 1e-21 UniRef50_Q4DCG2 Putative uncharacterized protein n=2 Tax=Trypano... 105 1e-21 UniRef50_Q6M9N8 Putative uncharacterized protein n=1 Tax=Candida... 105 1e-21 UniRef50_A4RQU5 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 105 1e-21 UniRef50_UPI000180C543 PREDICTED: similar to dihydrouridine synt... 105 1e-21 UniRef50_C4VA23 Putative uncharacterized protein n=1 Tax=Nosema ... 105 1e-21 UniRef50_D0WEP2 tRNA-dihydrouridine synthase B n=2 Tax=Slackia R... 105 1e-21 UniRef50_A7BE39 Putative uncharacterized protein n=1 Tax=Actinom... 105 2e-21 UniRef50_C2KNM7 Possible tRNA-dihydrouridine synthase n=4 Tax=Mo... 105 2e-21 UniRef50_D1NSS9 Putative tRNA-dihydrouridine synthase n=1 Tax=Bi... 104 2e-21 UniRef50_Q4PG83 Putative uncharacterized protein n=2 Tax=Ustilag... 104 2e-21 UniRef50_Q8SUV4 Putative uncharacterized protein ECU07_1610 n=1 ... 104 4e-21 UniRef50_D1AWB1 Dihydrouridine synthase DuS n=12 Tax=Fusobacteri... 104 4e-21 UniRef50_A9UTQ9 Predicted protein n=1 Tax=Monosiga brevicollis R... 104 4e-21 UniRef50_D1JF95 Putative phosphoribosylformimino-5-aminoimidazol... 103 5e-21 UniRef50_Q9FH91 Gb|AAF51525.1 n=7 Tax=Viridiplantae RepID=Q9FH91... 103 5e-21 UniRef50_B3PD21 Dihydrouridine synthase family protein n=4 Tax=P... 103 5e-21 UniRef50_A5EVV4 Dihydrouridine synthase n=2 Tax=Cardiobacteriace... 103 6e-21 UniRef50_C7GZ00 tRNA-dihydrouridine synthase n=1 Tax=Eubacterium... 103 6e-21 UniRef50_UPI0001BCCF0E nifR3 family TIM-barrel protein n=1 Tax=A... 103 6e-21 UniRef50_B8HVG9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 103 6e-21 UniRef50_A7AQM0 Dihydrouridine synthase, putative n=1 Tax=Babesi... 103 7e-21 UniRef50_Q06063 tRNA-dihydrouridine synthase 4 n=23 Tax=Saccharo... 103 7e-21 UniRef50_Q256J2 Dehydrogenases n=13 Tax=Chlamydiaceae RepID=Q256... 103 8e-21 UniRef50_C1ZB06 tRNA-dihydrouridine synthase n=1 Tax=Planctomyce... 103 8e-21 UniRef50_C9LMP9 tRNA-dihydrouridine synthase n=1 Tax=Dialister i... 103 8e-21 UniRef50_B9L781 tRNA-dihydrouridine synthase B n=1 Tax=Nautilia ... 103 1e-20 UniRef50_Q17M24 tRNA-dihydrouridine synthase n=2 Tax=Diptera Rep... 102 1e-20 UniRef50_C9RMP3 Dihydrouridine synthase DuS n=1 Tax=Fibrobacter ... 102 1e-20 UniRef50_D2QXV2 Dihydrouridine synthase DuS n=4 Tax=Planctomycet... 102 1e-20 UniRef50_B0SC53 tRNA-dihydrouridine synthase n=2 Tax=Leptospira ... 102 1e-20 UniRef50_B8P5W1 Predicted protein n=1 Tax=Postia placenta Mad-69... 102 2e-20 UniRef50_Q3MB47 Dihydrouridine synthase, DuS n=6 Tax=Bacteria Re... 102 2e-20 UniRef50_Q6AJZ5 tRNA-dihydrouridine synthase n=1 Tax=Desulfotale... 101 2e-20 UniRef50_Q9VPM1 CG3645, isoform A n=9 Tax=Diptera RepID=Q9VPM1_D... 101 2e-20 UniRef50_A8Y3E7 Putative uncharacterized protein n=2 Tax=Caenorh... 101 2e-20 UniRef50_Q7QCT0 AGAP002791-PA (Fragment) n=3 Tax=Culicidae RepID... 101 3e-20 UniRef50_C5CI99 Dihydrouridine synthase DuS n=1 Tax=Kosmotoga ol... 101 3e-20 UniRef50_C5TM05 tRNA-dihydrouridine synthase C n=5 Tax=Neisseria... 101 3e-20 UniRef50_C6SB16 tRNA-dihydrouridine synthase B n=1 Tax=Neisseria... 101 3e-20 UniRef50_Q6AKJ6 Putative uncharacterized protein n=1 Tax=Desulfo... 101 4e-20 UniRef50_B8DSX5 Possible NifR3-like protein n=15 Tax=Bifidobacte... 100 4e-20 UniRef50_Q12U52 tRNA-dihydrouridine synthase n=2 Tax=Archaea Rep... 100 4e-20 UniRef50_P33371 tRNA-dihydrouridine synthase C n=160 Tax=Gammapr... 100 4e-20 UniRef50_B0S217 Nitrogen regulation protein n=3 Tax=Clostridiale... 100 4e-20 UniRef50_Q6C4K2 YALI0E26059p n=1 Tax=Yarrowia lipolytica RepID=Q... 100 4e-20 UniRef50_Q2FS89 Histidine biosynthesis n=1 Tax=Methanospirillum ... 100 4e-20 UniRef50_Q6P1R4 tRNA-dihydrouridine synthase 1-like n=12 Tax=Eut... 100 4e-20 UniRef50_Q5KP54 Putative uncharacterized protein n=1 Tax=Filobas... 100 4e-20 UniRef50_A8TG14 Histidine biosynthesis protein n=1 Tax=Methanoco... 100 4e-20 UniRef50_Q2IG49 Dihydrouridine synthase TIM-barrel protein nifR3... 100 5e-20 UniRef50_D1VTQ2 Probable tRNA-dihydrouridine synthase n=1 Tax=Pe... 100 6e-20 UniRef50_C1MXD1 Dihydrouridine synthase n=1 Tax=Micromonas pusil... 99 7e-20 UniRef50_UPI000179183B PREDICTED: similar to tRNA-dihydrouridine... 99 7e-20 UniRef50_B7G230 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 99 7e-20 UniRef50_A9BIR6 Dihydrouridine synthase DuS n=1 Tax=Petrotoga mo... 99 8e-20 UniRef50_B9CKJ9 tRNA-dihydrouridine synthase B n=1 Tax=Atopobium... 100 9e-20 UniRef50_Q30WR3 Dihydrouridine synthase family protein n=3 Tax=D... 100 1e-19 UniRef50_A3PE78 Putative uncharacterized protein n=1 Tax=Prochlo... 99 1e-19 UniRef50_Q2NEW9 Putative uncharacterized protein n=1 Tax=Methano... 99 1e-19 UniRef50_B2JX56 Histidine biosynthesis protein n=6 Tax=Burkholde... 99 1e-19 UniRef50_D1AII6 Dihydrouridine synthase DuS n=1 Tax=Sebaldella t... 99 1e-19 UniRef50_C4QMR1 tRNA-dihydrouridine synthase, putative n=1 Tax=S... 99 1e-19 UniRef50_B8EIK2 Histidine biosynthesis protein n=2 Tax=Beijerinc... 99 1e-19 UniRef50_Q6A959 TIM-barrel enzyme, NifR3 family n=2 Tax=Propioni... 99 1e-19 UniRef50_A6DCX2 tRNA-dihydrouridine synthase B n=1 Tax=Caminibac... 99 2e-19 UniRef50_A4S141 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 99 2e-19 UniRef50_Q9JUP6 tRNA-dihydrouridine synthase C n=23 Tax=Neisseri... 98 2e-19 UniRef50_C6C170 Dihydrouridine synthase DuS n=1 Tax=Desulfovibri... 98 2e-19 UniRef50_UPI00016C52C4 dihydrouridine synthase DuS n=1 Tax=Gemma... 98 2e-19 UniRef50_Q00XL7 TRNA-dihydrouridine synthase (ISS) n=1 Tax=Ostre... 98 2e-19 UniRef50_B9PUI2 Dihydrouridine synthase domain-containing protei... 98 2e-19 UniRef50_Q9VIS4 CG10463 n=12 Tax=Drosophila RepID=Q9VIS4_DROME 98 2e-19 UniRef50_A4S604 Predicted protein (Fragment) n=2 Tax=Mamiellales... 98 3e-19 UniRef50_Q4UGK9 Putative uncharacterized protein n=2 Tax=Theiler... 98 3e-19 UniRef50_C8S7V0 HisA/hisF family protein n=1 Tax=Ferroglobus pla... 98 3e-19 UniRef50_A8QBG9 PP3111 protein, putative n=1 Tax=Brugia malayi R... 98 3e-19 UniRef50_C6QGP7 Histidine biosynthesis protein n=3 Tax=Rhizobial... 98 4e-19 UniRef50_O29545 Phosphoribosylformimino-5-aminoimidazole carboxa... 97 4e-19 UniRef50_UPI000186DA49 tRNA-dihydrouridine synthase, putative n=... 97 4e-19 UniRef50_UPI00006A5AE6 PREDICTED: similar to PP3111 protein n=1 ... 97 4e-19 UniRef50_Q09504 Uncharacterized tRNA-dihydrouridine synthase-lik... 97 5e-19 UniRef50_A7H1K2 tRNA-dihydrouridine synthase B n=14 Tax=Campylob... 97 6e-19 UniRef50_Q5KPM6 Putative uncharacterized protein n=2 Tax=Filobas... 97 6e-19 UniRef50_C4ZG69 APG10 (Albino and pale green 10); 1-(5-phosphori... 97 6e-19 UniRef50_B7PD41 tRNA-dihydrouridine synthase, putative n=1 Tax=I... 97 7e-19 UniRef50_Q603E0 Putative HisA/HisF family protein n=1 Tax=Methyl... 96 7e-19 UniRef50_UPI00015B403F PREDICTED: similar to MGC79829 protein n=... 96 1e-18 UniRef50_C6XDW4 Histidine biosynthesis protein n=1 Tax=Methylovo... 96 1e-18 UniRef50_B9K738 TIM-barrel protein, nifR3 family n=1 Tax=Thermot... 96 1e-18 UniRef50_Q47C15 Dihydrouridine synthase, DuS n=1 Tax=Dechloromon... 96 1e-18 UniRef50_A1VHK2 Dihydrouridine synthase, DuS n=10 Tax=Desulfovib... 95 2e-18 UniRef50_D2QYD3 Histidine biosynthesis protein n=1 Tax=Pirellula... 95 2e-18 UniRef50_UPI00006DC778 hypothetical protein CdifQ_04001754 n=1 T... 95 2e-18 UniRef50_B8P3J2 Predicted protein (Fragment) n=3 Tax=Agaricomyce... 95 2e-18 UniRef50_D2VPF2 Predicted protein n=2 Tax=Naegleria gruberi RepI... 95 2e-18 UniRef50_A4EC62 Putative uncharacterized protein n=3 Tax=Collins... 95 2e-18 UniRef50_A7I0T0 NifR3 family protein n=9 Tax=Epsilonproteobacter... 95 2e-18 UniRef50_C5F231 Putative uncharacterized protein n=2 Tax=Helicob... 95 2e-18 UniRef50_B0SXE6 TIM-barrel protein, nifR3 family n=2 Tax=Cauloba... 95 3e-18 UniRef50_C1SJZ7 tRNA-dihydrouridine synthase n=1 Tax=Denitrovibr... 95 3e-18 UniRef50_B7FXL2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 95 3e-18 UniRef50_C0N3H2 Histidine biosynthesis protein n=1 Tax=Methyloph... 95 3e-18 UniRef50_D1AZV6 Dihydrouridine synthase DuS n=7 Tax=Campylobacte... 95 3e-18 UniRef50_B3LAS6 tRNA-dihydrouridine synthase, putative n=6 Tax=P... 94 4e-18 UniRef50_Q9CJW1 tRNA-dihydrouridine synthase C n=7 Tax=Gammaprot... 94 4e-18 UniRef50_O82782 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 94 4e-18 UniRef50_A3JG66 Putative uncharacterized protein n=3 Tax=Gammapr... 94 4e-18 UniRef50_C0QXB6 Dihydrouridine synthase-like (DUS-like) FMN-bind... 94 5e-18 UniRef50_Q884C6 tRNA-dihydrouridine synthase C n=13 Tax=Proteoba... 94 5e-18 UniRef50_Q73RG6 Dihydrouridine synthase, putative n=1 Tax=Trepon... 94 5e-18 UniRef50_Q1ZGI3 NifR3/Smm1 family protein n=1 Tax=Psychromonas s... 94 5e-18 UniRef50_D1U4K9 Dihydrouridine synthase DuS n=1 Tax=Desulfovibri... 94 5e-18 UniRef50_B8C4H3 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 94 6e-18 UniRef50_C1EEA5 Dihydrouridine synthase n=1 Tax=Micromonas sp. R... 94 6e-18 UniRef50_Q21L63 Dihydrouridine synthase, DuS n=1 Tax=Saccharopha... 94 6e-18 UniRef50_A8TGW8 Histidine biosynthesis protein n=1 Tax=Methanoco... 93 6e-18 UniRef50_B7XJM7 tRNA-dihydrouridine synthase 1 n=1 Tax=Enterocyt... 93 7e-18 UniRef50_Q72EB7 Dihydrouridine synthase family protein n=4 Tax=D... 93 7e-18 UniRef50_A0B616 Histidine biosynthesis n=1 Tax=Methanosaeta ther... 93 8e-18 UniRef50_Q1H0R8 Histidine biosynthesis n=1 Tax=Methylobacillus f... 93 1e-17 UniRef50_UPI0001792282 PREDICTED: similar to tRNA-dihydrouridine... 93 1e-17 UniRef50_A2DHB4 Putative uncharacterized protein n=1 Tax=Trichom... 93 1e-17 UniRef50_Q9BTJ3 DUS1L protein (Fragment) n=7 Tax=Euteleostomi Re... 93 1e-17 UniRef50_D2VPP8 Predicted protein n=1 Tax=Naegleria gruberi RepI... 93 1e-17 UniRef50_C7LQM9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibri... 93 1e-17 UniRef50_A6W1E8 Dihydrouridine synthase DuS n=1 Tax=Marinomonas ... 93 1e-17 UniRef50_B0S913 tRNA-dihydrouridine synthase n=7 Tax=Leptospira ... 92 2e-17 UniRef50_C8X244 Dihydrouridine synthase DuS n=1 Tax=Desulfohalob... 92 2e-17 UniRef50_Q9VJ06 CG10495 n=12 Tax=Drosophila RepID=Q9VJ06_DROME 92 2e-17 UniRef50_B8FH09 Dihydrouridine synthase DuS n=1 Tax=Desulfatibac... 92 2e-17 UniRef50_A8J281 Predicted protein (Fragment) n=3 Tax=cellular or... 92 2e-17 UniRef50_Q87N01 tRNA-dihydrouridine synthase C n=54 Tax=Gammapro... 92 2e-17 UniRef50_B8DIS9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibri... 92 2e-17 UniRef50_A7IL67 Histidine biosynthesis protein n=2 Tax=Alphaprot... 92 2e-17 UniRef50_B1C9Q3 Putative uncharacterized protein n=1 Tax=Anaerof... 91 2e-17 UniRef50_C6WWE3 Histidine biosynthesis protein n=1 Tax=Methylote... 91 3e-17 UniRef50_B9PN28 tRNA-dihydrouridine synthase, putative n=3 Tax=T... 91 3e-17 UniRef50_C1DY86 Dihydrouridine synthase-like family protein n=1 ... 91 3e-17 UniRef50_A2EF32 Dihydrouridine synthase, putative n=1 Tax=Tricho... 91 4e-17 UniRef50_B0ESC7 tRNA-dihydrouridine synthase, putative n=2 Tax=E... 91 5e-17 UniRef50_A2FU21 Putative uncharacterized protein n=1 Tax=Trichom... 90 6e-17 UniRef50_B9XLX7 Dihydrouridine synthase DuS n=3 Tax=Verrucomicro... 90 6e-17 UniRef50_Q6R3H4 Conserved protein n=1 Tax=Methylosinus sp. LW2 R... 90 7e-17 UniRef50_Q5ZRM0 Nitrogen regulation protein n=6 Tax=Legionella R... 90 7e-17 UniRef50_C1EGQ3 Predicted protein n=2 Tax=Micromonas RepID=C1EGQ... 90 7e-17 UniRef50_Q9NX74 tRNA-dihydrouridine synthase 2-like n=35 Tax=Met... 90 9e-17 UniRef50_A2EN54 Putative uncharacterized protein n=1 Tax=Trichom... 90 1e-16 UniRef50_A2ST44 Histidine biosynthesis protein n=1 Tax=Methanoco... 90 1e-16 UniRef50_B2UL06 Phosphoribosylformimino-5-aminoimidazole carboxa... 88 2e-16 UniRef50_A6GHV6 Dihydrouridine synthase family protein n=1 Tax=P... 88 2e-16 UniRef50_O53835 Probable tRNA-dihydrouridine synthase n=107 Tax=... 88 2e-16 UniRef50_D2VK62 Dihydrouridine synthase, DuS n=1 Tax=Naegleria g... 88 2e-16 UniRef50_B6JXB4 tRNA-dihydrouridine synthase n=1 Tax=Schizosacch... 88 2e-16 UniRef50_D1N0Y1 Dihydrouridine synthase DuS n=1 Tax=Victivallis ... 88 4e-16 UniRef50_A6QPA8 DUS4L protein n=2 Tax=Eutheria RepID=A6QPA8_BOVIN 88 4e-16 UniRef50_D0P0N4 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 87 4e-16 UniRef50_Q0G4J3 HisA/HisF family protein, putative n=1 Tax=Fulvi... 87 5e-16 UniRef50_Q9VY45 CG1434 n=20 Tax=Arthropoda RepID=Q9VY45_DROME 87 6e-16 UniRef50_C0NEG2 tRNA-dihydrouridine synthase n=5 Tax=Ajellomyces... 87 7e-16 UniRef50_A4RU69 Predicted protein n=3 Tax=Chlorophyta RepID=A4RU... 87 7e-16 UniRef50_Q1QZQ6 Dihydrouridine synthase, DuS n=1 Tax=Chromohalob... 86 9e-16 UniRef50_A4RVX6 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 86 9e-16 UniRef50_Q1N033 Putative uncharacterized protein n=1 Tax=Bermane... 86 1e-15 UniRef50_A9V4A0 Predicted protein n=1 Tax=Monosiga brevicollis R... 85 2e-15 UniRef50_Q127F8 Dihydrouridine synthase, DuS n=7 Tax=Proteobacte... 85 2e-15 UniRef50_UPI0001C3129C dihydrouridine synthase DuS n=1 Tax=Conex... 85 2e-15 UniRef50_C4Z9Z2 Imidazole glycerol phosphate synthase subunit Hi... 85 2e-15 UniRef50_Q1J2A4 Dihydrouridine synthase, DuS n=3 Tax=Deinococcus... 85 3e-15 UniRef50_A4HAN2 Putative uncharacterized protein n=3 Tax=Leishma... 85 3e-15 UniRef50_A8ICF9 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 85 3e-15 UniRef50_B0EC90 tRNA-dihydrouridine synthase, putative n=2 Tax=E... 85 3e-15 UniRef50_C5FBD9 tRNA-dihydrouridine synthase 1 n=1 Tax=Microspor... 85 4e-15 UniRef50_A2SJ37 HisA/HisF family protein, putative n=3 Tax=Burkh... 84 4e-15 UniRef50_A3ZZD2 Phosphoribosylformimino-5-aminoimidazole carboxa... 84 4e-15 UniRef50_O74553 tRNA-dihydrouridine synthase 4 n=1 Tax=Schizosac... 84 5e-15 UniRef50_C8PLW3 Putative dihydrouridine synthase n=1 Tax=Trepone... 84 6e-15 UniRef50_B1ZZ77 Dihydrouridine synthase DuS n=2 Tax=Opitutaceae ... 83 6e-15 UniRef50_B7GE60 Predicted protein n=11 Tax=cellular organisms Re... 83 6e-15 UniRef50_B1GZV7 Putative tRNA-dihydrouridine synthase n=1 Tax=un... 83 7e-15 UniRef50_C8X0F5 Dihydrouridine synthase DuS n=1 Tax=Desulfohalob... 83 9e-15 UniRef50_Q88LF2 tRNA-dihydrouridine synthase C n=38 Tax=cellular... 83 1e-14 UniRef50_C4QAZ6 tRNA-dihydrouridine synthase, putative n=1 Tax=S... 83 1e-14 UniRef50_B5IUS4 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 83 1e-14 UniRef50_Q10184 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 83 1e-14 UniRef50_A2DYY3 Putative uncharacterized protein n=1 Tax=Trichom... 82 2e-14 UniRef50_D1Z6W7 Whole genome shotgun sequence assembly, scaffold... 82 2e-14 UniRef50_Q9ZLB6 Probable tRNA-dihydrouridine synthase n=23 Tax=E... 82 2e-14 UniRef50_C1ZC07 HisA/hisF family protein n=1 Tax=Planctomyces li... 81 3e-14 UniRef50_A7HK00 Dihydrouridine synthase DuS n=8 Tax=Thermotogace... 81 3e-14 UniRef50_A7EMF2 Putative uncharacterized protein n=2 Tax=Sclerot... 81 3e-14 UniRef50_D0J1P6 Dihydrouridine synthase, DuS n=7 Tax=cellular or... 81 3e-14 UniRef50_B6BT49 tRNA-dihydrouridine synthase A n=4 Tax=SAR11 clu... 81 4e-14 UniRef50_A1AT39 Dihydrouridine synthase, DuS n=7 Tax=Desulfuromo... 81 4e-14 UniRef50_C8QWB5 Dihydrouridine synthase DuS n=1 Tax=Desulfurivib... 80 6e-14 UniRef50_A6RVN2 Putative uncharacterized protein n=2 Tax=Sclerot... 80 6e-14 UniRef50_Q0STG2 Dihydrouridine synthase family protein n=27 Tax=... 80 7e-14 UniRef50_A6DU09 Dihydrouridine synthase family protein n=1 Tax=L... 80 7e-14 UniRef50_A2F0D1 Putative uncharacterized protein n=1 Tax=Trichom... 80 7e-14 UniRef50_D2RIC4 Geranylgeranylglyceryl phosphate synthase n=2 Ta... 80 7e-14 UniRef50_A5WG83 TIM-barrel protein, yjbN family n=2 Tax=Moraxell... 80 8e-14 UniRef50_C4Q4G5 tRNA-dihydrouridine synthase, putative n=1 Tax=S... 80 9e-14 UniRef50_B9M3C8 Dihydrouridine synthase DuS n=2 Tax=Desulfuromon... 80 1e-13 UniRef50_C9M7Q0 Dihydrouridine synthase family protein n=1 Tax=J... 79 1e-13 UniRef50_D0NZC8 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 79 1e-13 UniRef50_Q6R3G3 Conserved protein n=1 Tax=Methylomonas sp. LW13 ... 79 2e-13 UniRef50_B7G5S1 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 78 2e-13 UniRef50_C9ZWQ2 tRNA-dihydrouridine synthase 1, putative n=2 Tax... 78 2e-13 UniRef50_A5Z3X7 Putative uncharacterized protein n=2 Tax=Clostri... 78 2e-13 UniRef50_B3E8L6 Dihydrouridine synthase, DuS n=1 Tax=Geobacter l... 78 3e-13 UniRef50_B0CNE7 Predicted protein n=3 Tax=Agaricales RepID=B0CNE... 78 3e-13 UniRef50_B1LZS6 Histidine biosynthesis protein n=10 Tax=Alphapro... 78 3e-13 UniRef50_O74731 tRNA-dihydrouridine synthase 2 n=2 Tax=Schizosac... 78 4e-13 UniRef50_Q8TVJ8 Indole-3-glycerol phosphate synthase n=1 Tax=Met... 77 4e-13 UniRef50_B8C9N7 Predicted protein n=1 Tax=Thalassiosira pseudona... 77 5e-13 UniRef50_Q46DH4 Phosphoribosylformimino-5-aminoimidazole carboxa... 77 6e-13 UniRef50_C1TL75 tRNA-dihydrouridine synthase n=2 Tax=Synergistac... 77 7e-13 UniRef50_A9V413 Predicted protein n=1 Tax=Monosiga brevicollis R... 76 1e-12 UniRef50_Q7UQJ1 Putative uncharacterized protein n=1 Tax=Rhodopi... 76 1e-12 UniRef50_A4IQ84 Indole-3-glycerol phosphate synthase n=7 Tax=Bac... 76 1e-12 UniRef50_A8MRX7 Uncharacterized protein At3g63510.2 n=5 Tax=Arab... 76 1e-12 UniRef50_C6A2A3 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 76 1e-12 UniRef50_B8BQ55 Predicted protein n=1 Tax=Thalassiosira pseudona... 76 1e-12 UniRef50_C9KKE5 Dihydroorotate oxidase n=6 Tax=Bacteria RepID=C9... 76 2e-12 UniRef50_C9RM69 TIM-barrel protein, yjbN family n=1 Tax=Fibrobac... 76 2e-12 UniRef50_A8F3E7 N-acylglucosamine-6-phosphate 2-epimerase n=1 Ta... 75 2e-12 UniRef50_B2KES4 Dihydrouridine synthase DuS n=1 Tax=Elusimicrobi... 75 2e-12 UniRef50_C3Q9B4 Dihydrouridine synthase n=18 Tax=Bacteroidales R... 75 2e-12 UniRef50_C5LIP5 Ornithine decarboxylase n=4 Tax=Perkinsus marinu... 75 2e-12 UniRef50_D0LY25 TIM-barrel protein, yjbN family n=3 Tax=Bacteria... 75 3e-12 UniRef50_UPI000180C428 PREDICTED: similar to tRNA-dihydrouridine... 74 5e-12 UniRef50_Q2SJJ8 TRNA-dihydrouridine synthase n=7 Tax=Gammaproteo... 74 5e-12 UniRef50_Q4SBU2 Inosine-5'-monophosphate dehydrogenase (Fragment... 74 6e-12 UniRef50_B9YRZ8 Indole-3-glycerol-phosphate synthase n=3 Tax=Nos... 73 9e-12 UniRef50_UPI0000E479FB PREDICTED: similar to MGC108441 protein n... 73 9e-12 UniRef50_A4RZE7 Predicted protein n=4 Tax=cellular organisms Rep... 73 1e-11 UniRef50_P40545 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 73 1e-11 UniRef50_A4YHD8 Indole-3-glycerol phosphate synthase n=13 Tax=Su... 73 1e-11 UniRef50_D1YXT1 Putative uncharacterized protein n=1 Tax=Methano... 73 1e-11 UniRef50_D2MIW0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 73 1e-11 UniRef50_A4IM35 Dihydroorotate dehydrogenase n=348 Tax=Bacteria ... 73 1e-11 UniRef50_B8LBY8 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 72 2e-11 UniRef50_C2KW54 Dihydrouridine synthase, DuS n=1 Tax=Oribacteriu... 72 2e-11 UniRef50_B8HZU1 Photosystem I assembly BtpA n=5 Tax=Clostridiale... 72 2e-11 UniRef50_C5X8Y0 Putative uncharacterized protein Sb02g020430 n=1... 72 2e-11 UniRef50_A4HJH5 Dihydrouridine synthase (Dus), putative n=3 Tax=... 71 2e-11 UniRef50_Q3ABS1 Indole-3-glycerol phosphate synthase n=1 Tax=Car... 71 2e-11 UniRef50_Q3ZZ14 Indole-3-glycerol phosphate synthase n=5 Tax=Deh... 71 3e-11 UniRef50_A7I924 Histidine biosynthesis n=3 Tax=Methanomicrobiale... 71 3e-11 UniRef50_B3RND8 Putative uncharacterized protein n=1 Tax=Trichop... 71 4e-11 UniRef50_B0EBU6 tRNA-dihydrouridine synthase, putative n=4 Tax=E... 71 5e-11 UniRef50_C5D3D6 Indole-3-glycerol phosphate synthase n=10 Tax=Ba... 70 6e-11 UniRef50_A1UF85 Pyridoxine biosynthesis protein n=3 Tax=Mycobact... 70 8e-11 UniRef50_D1AMN2 Dihydrouridine synthase DuS n=3 Tax=Bacteria Rep... 70 1e-10 UniRef50_A8PLS2 tRNA-dihydrouridine synthase A n=1 Tax=Rickettsi... 69 1e-10 UniRef50_B5YJH1 Dihydroorotate dehydrogenase n=24 Tax=Bacteria R... 69 1e-10 UniRef50_A9BJH4 Dihydroorotate dehydrogenase n=45 Tax=Bacteria R... 69 1e-10 UniRef50_C5CIM1 N-acylglucosamine-6-phosphate 2-epimerase n=1 Ta... 69 1e-10 UniRef50_Q583Y8 TRNA-dihydrouridine synthase 4, putative n=4 Tax... 69 2e-10 UniRef50_A5D1S4 Indole-3-glycerol phosphate synthase n=1 Tax=Pel... 69 2e-10 UniRef50_C3RNU9 NADH:flavin oxidoreductase n=2 Tax=Bacteria RepI... 68 3e-10 UniRef50_Q0A6E8 Indole-3-glycerol phosphate synthase n=5 Tax=Pro... 68 3e-10 UniRef50_A5KQG7 Putative uncharacterized protein n=1 Tax=Ruminoc... 68 3e-10 UniRef50_B6FRG7 Putative uncharacterized protein (Fragment) n=2 ... 68 4e-10 UniRef50_UPI0001C41F37 tRNA-dihydrouridine synthase DusA2 n=1 Ta... 68 4e-10 UniRef50_D1B5R0 Dihydrouridine synthase DuS n=1 Tax=Thermanaerov... 67 5e-10 UniRef50_Q1G992 Dihydroorotate dehydrogenase n=3 Tax=Lactobacill... 67 5e-10 UniRef50_C3WAT9 2-nitropropane dioxygenase n=5 Tax=Fusobacterium... 67 5e-10 UniRef50_Q9V1G3 Indole-3-glycerol phosphate synthase n=11 Tax=Eu... 67 5e-10 UniRef50_B0MC46 Putative uncharacterized protein n=1 Tax=Anaeros... 67 5e-10 UniRef50_Q03148 Pyridoxine biosynthesis protein SNZ1 n=262 Tax=c... 67 6e-10 UniRef50_C8W700 Dihydroorotate dehydrogenase family protein n=2 ... 67 7e-10 UniRef50_Q1CZH5 Indole-3-glycerol phosphate synthase n=2 Tax=Cys... 67 7e-10 UniRef50_Q466J2 NADH-dependent flavine oxidoreductase n=1 Tax=Me... 66 8e-10 UniRef50_Q2RTX4 Dihydrouridine synthase TIM-barrel protein yjbN ... 66 1e-09 UniRef50_Q6MQA5 2-nitropropane dioxygenase n=1 Tax=Bdellovibrio ... 66 1e-09 UniRef50_A3XQ63 PcrB-like protein n=3 Tax=Flavobacteriaceae RepI... 66 1e-09 UniRef50_C8WHP0 Dihydroorotate dehydrogenase family protein n=3 ... 66 1e-09 UniRef50_A4ECL7 Putative uncharacterized protein n=1 Tax=Collins... 66 1e-09 UniRef50_C4F860 Putative uncharacterized protein n=2 Tax=Collins... 65 2e-09 UniRef50_B7GNV1 N-acylglucosamine-6-phosphate 2-epimerase n=10 T... 65 2e-09 UniRef50_Q468H4 NADH peroxidase n=5 Tax=cellular organisms RepID... 65 3e-09 UniRef50_Q1MQG1 Dihydroorotate dehydrogenase n=2 Tax=Deltaproteo... 65 3e-09 UniRef50_Q12ZA4 Putative uncharacterized protein n=5 Tax=Euryarc... 65 3e-09 UniRef50_Q02X79 Dioxygenase n=3 Tax=Lactococcus lactis RepID=Q02... 64 3e-09 UniRef50_Q0VMM0 2-nitropropane dioxygenase, putative n=2 Tax=Gam... 64 3e-09 UniRef50_UPI000038257B COG1902: NADH:flavin oxidoreductases, Old... 64 4e-09 UniRef50_Q2C3Y8 Putative oxidoreductase protein n=3 Tax=Gammapro... 64 5e-09 UniRef50_C9M6H2 Dihydroorotate oxidase n=2 Tax=Synergistaceae Re... 64 5e-09 UniRef50_C7NTV9 Dihydropyrimidine dehydrogenase n=10 Tax=Halobac... 63 7e-09 UniRef50_UPI0001BCB21D enoyl-[acyl-carrier-protein] reductase n=... 63 7e-09 UniRef50_C6MNJ9 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 63 7e-09 UniRef50_B2A0N8 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 63 7e-09 UniRef50_C4KIS5 Geranylgeranylglyceryl phosphate synthase n=13 T... 63 8e-09 UniRef50_C7GEK5 NADH:flavin oxidoreductase, Old Yellow Enzyme fa... 63 8e-09 UniRef50_Q01YA2 Dihydroorotate dehydrogenase n=5 Tax=Bacteria Re... 63 8e-09 UniRef50_C4FAV3 Putative uncharacterized protein n=1 Tax=Collins... 63 9e-09 UniRef50_C1TMB2 Dihydroorotate dehydrogenase family protein n=1 ... 63 1e-08 UniRef50_B1L6Q8 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 63 1e-08 UniRef50_A6L5H1 Dihydroorotate dehydrogenase n=7 Tax=Bacteroidal... 63 1e-08 UniRef50_Q0W6C2 Phosphoribosylformimino-5-aminoimidazole carboxa... 63 1e-08 UniRef50_A5N0D9 Predicted enoate reductase n=2 Tax=Clostridium k... 63 1e-08 UniRef50_C8NN95 Dioxygenase n=4 Tax=Corynebacterium RepID=C8NN95... 63 1e-08 UniRef50_C5EVU6 NADH:flavin oxidoreductase n=1 Tax=Clostridiales... 63 1e-08 UniRef50_B9SRY4 Putative uncharacterized protein n=1 Tax=Ricinus... 63 1e-08 UniRef50_A1X3A1 Putative NADH:flavin oxidoreductase n=2 Tax=Anae... 62 2e-08 UniRef50_C0D969 Putative uncharacterized protein n=1 Tax=Clostri... 62 2e-08 UniRef50_A9BH24 Putative N-acetylmannosamine-6-phosphate epimera... 62 2e-08 UniRef50_B0TE53 Biotin synthase n=2 Tax=Clostridia RepID=BIOB_HELMI 62 2e-08 UniRef50_A5G9T5 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=... 62 2e-08 UniRef50_O27281 Dihydroorotate dehydrogenase n=20 Tax=Euryarchae... 62 2e-08 UniRef50_A5FJK8 Geranylgeranylglyceryl phosphate synthase n=7 Ta... 62 2e-08 UniRef50_A7AWB5 Dihydrouridine synthase (Dus) domain containing ... 61 3e-08 UniRef50_Q6MM64 Inosine-5-monophosphate dehydrogenase n=1 Tax=Bd... 61 3e-08 UniRef50_A8VQT3 Transposase IS3/IS911 family protein n=1 Tax=Bac... 61 3e-08 UniRef50_Q82KQ8 Putative oxidoreductase n=1 Tax=Streptomyces ave... 61 3e-08 UniRef50_B1HS08 2-nitropropane dioxygenase n=2 Tax=Bacillaceae R... 61 4e-08 UniRef50_A3U0T3 Probable dihydroorotate dehydrogenase, catalytic... 61 4e-08 UniRef50_C1I8I7 N-acetylmannosamine-6-phosphate 2-epimerase n=7 ... 61 4e-08 UniRef50_O29991 NADH-dependent flavin oxidoreductase n=1 Tax=Arc... 61 4e-08 UniRef50_Q9F8I8 Cyclase (Fragment) n=1 Tax=Carboxydothermus hydr... 61 4e-08 UniRef50_A1RXV6 Geranylgeranylglyceryl phosphate synthase n=4 Ta... 61 4e-08 UniRef50_Q2NEG1 PyrD n=1 Tax=Methanosphaera stadtmanae DSM 3091 ... 61 5e-08 UniRef50_C2BGB2 NADH:flavin oxidoreductase n=1 Tax=Anaerococcus ... 61 5e-08 UniRef50_Q09E70 Thiazole biosynthesis protein ThiG n=1 Tax=Stigm... 60 6e-08 UniRef50_C0QYH6 Dihydroorotate dehydrogenase n=2 Tax=Brachyspira... 60 6e-08 UniRef50_B0KBD0 NADH:flavin oxidoreductase/NADH oxidase n=11 Tax... 60 7e-08 UniRef50_Q3AC05 Dihydroorotate dehydrogenase n=1 Tax=Carboxydoth... 60 7e-08 UniRef50_B0VIM3 Dihydroorotate dehydrogenase, catalytic subunit ... 60 7e-08 UniRef50_A4A9J1 2-nitropropane dioxygenase, NPD n=1 Tax=Congregi... 60 8e-08 UniRef50_B3QW78 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 60 8e-08 UniRef50_Q2SS69 Putative N-acetylmannosamine-6-phosphate 2-epime... 60 9e-08 UniRef50_O27697 Tryptophan synthase alpha chain n=3 Tax=Methanob... 60 9e-08 UniRef50_Q39TJ5 2,4-dienoyl-CoA reductase n=1 Tax=Geobacter meta... 60 9e-08 UniRef50_A8S5R8 Putative uncharacterized protein n=1 Tax=Clostri... 59 1e-07 UniRef50_B7EB81 cDNA clone:J013037E09, full insert sequence n=3 ... 59 1e-07 UniRef50_C7JI48 Enoyl[acyl-carrier-protein (ACP)] reductase n=8 ... 59 1e-07 UniRef50_C2D6B3 Dihydroorotate oxidase n=1 Tax=Atopobium vaginae... 59 1e-07 UniRef50_Q02YU5 Putative N-acetylmannosamine-6-phosphate 2-epime... 59 1e-07 UniRef50_B0TGQ8 Dihydroorotate dehydrogenase n=32 Tax=Bacteria R... 59 1e-07 UniRef50_B9Y4T3 Putative uncharacterized protein n=1 Tax=Holdema... 59 1e-07 UniRef50_A8MJK5 Dihydroorotate dehydrogenase family protein n=1 ... 59 1e-07 UniRef50_A5ULU9 tRNA-dihydrouridine synthase n=2 Tax=Methanobrev... 59 2e-07 UniRef50_A2R578 Contig An15c0120, complete genome n=29 Tax=Leoti... 59 2e-07 UniRef50_C6A1L2 Dihydroorotate dehydrogenase family protein n=1 ... 59 2e-07 UniRef50_B1MZ73 Dihydroorotate dehydrogenase B, catalytic subuni... 59 2e-07 UniRef50_B1JA40 2-nitropropane dioxygenase NPD n=11 Tax=Proteoba... 59 2e-07 UniRef50_A7GWT5 NADH oxidase n=7 Tax=delta/epsilon subdivisions ... 59 2e-07 UniRef50_B8HZW6 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=... 58 3e-07 UniRef50_B8D5Y6 Geranylgeranylglyceryl phosphate synthase-like p... 58 3e-07 UniRef50_Q0B324 Dihydroorotate oxidase B, catalytic subunit n=8 ... 58 3e-07 UniRef50_C5CHS6 Dihydroorotate dehydrogenase family protein n=1 ... 58 3e-07 UniRef50_D1AI07 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=... 58 3e-07 UniRef50_C8PVF7 2-nitropropane dioxygenase, NPD n=3 Tax=Proteoba... 58 3e-07 UniRef50_Q26HI8 Putative PcrB family protein n=1 Tax=Flavobacter... 58 3e-07 UniRef50_C2CLX0 Possible 2-nitropropane dioxygenase n=7 Tax=Cory... 58 3e-07 UniRef50_UPI00016A96D1 S-mandelate dehydrogenase (MdlB) n=1 Tax=... 58 3e-07 UniRef50_D2LUG6 2,4-dienoyl-CoA reductase (NADPH) n=1 Tax=Bacill... 58 3e-07 UniRef50_A3JQL6 2-nitropropane dioxygenase, NPD n=3 Tax=Proteoba... 58 3e-07 UniRef50_A3HVC3 PcrB-like protein n=1 Tax=Algoriphagus sp. PR1 R... 58 4e-07 UniRef50_C6W0Z1 Geranylgeranylglyceryl phosphate synthase n=2 Ta... 57 5e-07 UniRef50_Q1QEU5 2-nitropropane dioxygenase, NPD n=3 Tax=Psychrob... 57 5e-07 UniRef50_B9Y4V9 Putative uncharacterized protein n=2 Tax=Holdema... 57 5e-07 UniRef50_B9ML92 Ketose-bisphosphate aldolase n=2 Tax=Clostridial... 57 5e-07 UniRef50_D1VVG5 Putative enoyl-(Acyl-carrier-protein) reductase ... 57 5e-07 UniRef50_O19904 Uncharacterized protein ycf23 n=1 Tax=Cyanidium ... 57 6e-07 UniRef50_C9SVG4 5-proFAR isomerase n=1 Tax=Verticillium albo-atr... 57 6e-07 UniRef50_C4V1R4 N-acylglucosamine-6-phosphate 2-epimerase n=4 Ta... 57 6e-07 UniRef50_Q6SH52 Oxidoreductase, FAD/FMN-binding n=2 Tax=Bacteria... 57 6e-07 UniRef50_C3RHP7 NADH:flavin oxidoreductase n=5 Tax=Bacteria RepI... 57 7e-07 UniRef50_Q1J585 Enoyl-reductase (NADH) n=1 Tax=Streptococcus pyo... 57 7e-07 UniRef50_A1S1G3 Oxidoreductase, FAD/FMN-binding n=1 Tax=Shewanel... 57 7e-07 UniRef50_Q8TXM0 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 57 7e-07 UniRef50_Q2W414 Dioxygenase related to 2-nitropropane dioxygenas... 56 9e-07 UniRef50_Q8EW89 Inosine-5'-monophosphate dehydrogenase n=1 Tax=M... 56 9e-07 UniRef50_Q12NI3 NADH:flavin oxidoreductase/NADH oxidase n=14 Tax... 56 9e-07 UniRef50_B0NDA0 Putative uncharacterized protein n=1 Tax=Clostri... 56 9e-07 UniRef50_A7NSB8 Dihydroorotate dehydrogenase n=2 Tax=Roseiflexus... 56 1e-06 UniRef50_P47996 Inosine-5'-monophosphate dehydrogenase n=4 Tax=V... 56 1e-06 UniRef50_Q7NTY1 GMP reductase n=1 Tax=Chromobacterium violaceum ... 56 1e-06 UniRef50_UPI0001C41E29 NADH:flavin oxidoreductase/NADH oxidase f... 56 1e-06 UniRef50_B2A1T3 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 56 1e-06 UniRef50_P59441 Putative N-acetylmannosamine-6-phosphate 2-epime... 56 1e-06 UniRef50_O29513 Dihydroorotate dehydrogenase n=3 Tax=Archaeoglob... 56 1e-06 UniRef50_UPI0001789498 N-acylglucosamine-6-phosphate 2-epimerase... 56 1e-06 UniRef50_P49058 Inosine-5'-monophosphate dehydrogenase n=23 Tax=... 56 1e-06 UniRef50_C7PJL9 2-nitropropane dioxygenase NPD n=1 Tax=Chitinoph... 56 1e-06 UniRef50_Q8CN30 Thiazole synthase n=10 Tax=Staphylococcus RepID=... 56 1e-06 UniRef50_A8MLA4 NADH:flavin oxidoreductase/NADH oxidase n=3 Tax=... 56 1e-06 UniRef50_A1BHW3 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=... 56 2e-06 UniRef50_C0GCL4 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 56 2e-06 UniRef50_Q4QEB3 Inosine-5'-monophosphate dehydrogenase n=8 Tax=c... 56 2e-06 UniRef50_A1WLV1 NADH:flavin oxidoreductase/NADH oxidase n=37 Tax... 55 2e-06 UniRef50_C8P8F1 2-enoate reductase n=1 Tax=Lactobacillus antri D... 55 2e-06 UniRef50_D1CBJ1 Tryptophan synthase alpha chain n=1 Tax=Thermoba... 55 2e-06 UniRef50_A3QE46 2-nitropropane dioxygenase, NPD n=20 Tax=Gammapr... 55 2e-06 UniRef50_B1I129 2-nitropropane dioxygenase, NPD n=12 Tax=Bacteri... 55 2e-06 UniRef50_A5WFG6 FMN-dependent alpha-hydroxy acid dehydrogenase n... 55 2e-06 UniRef50_Q2FKX6 Tryptophan synthase alpha chain n=1 Tax=Methanos... 55 2e-06 UniRef50_C2KD02 Enoyl-[acyl-carrier-protein] reductase (NADH) n=... 55 2e-06 UniRef50_UPI000169A137 bifunctional sulfur carrier protein/thiaz... 55 2e-06 UniRef50_C7QGH7 Thiazole biosynthesis family protein n=2 Tax=Act... 55 2e-06 UniRef50_Q47R37 Thiazole synthase n=124 Tax=Bacteria RepID=THIG_... 55 3e-06 UniRef50_A9IBQ0 Putative uncharacterized protein n=1 Tax=Bordete... 55 3e-06 UniRef50_A9LZ84 Inosine-5'-monophosphate dehydrogenase n=57 Tax=... 55 3e-06 UniRef50_Q7UJL3 Inosine-5'-monophosphate dehydrogenase n=2 Tax=B... 54 3e-06 UniRef50_C9KP46 Oxidoreductase, FAD/FMN-binding n=2 Tax=Clostrid... 54 3e-06 UniRef50_Q47B08 2-nitropropane dioxygenase, NPD n=2 Tax=Proteoba... 54 3e-06 UniRef50_Q6BVL8 DEHA2C01584p n=4 Tax=Dikarya RepID=Q6BVL8_DEBHA 54 3e-06 UniRef50_B6KJZ7 Inosine-5'-monophosphate dehydrogenase n=4 Tax=A... 54 3e-06 UniRef50_B5FFW2 Putative imidazole glycerol phosphate synthase s... 54 3e-06 UniRef50_A8VXV8 Tryptophan synthase alpha chain n=2 Tax=Bacillus... 54 4e-06 UniRef50_D1JFH0 Dihydroorotate dehydrogenase electron transfer s... 54 4e-06 UniRef50_Q8TXQ6 tRNA-dihydrouridine synthase n=1 Tax=Methanopyru... 54 4e-06 UniRef50_C8SAQ9 CO dehydrogenase/acetyl-CoA synthase, delta subu... 54 4e-06 UniRef50_C1XIL7 NADH:flavin oxidoreductase n=1 Tax=Meiothermus r... 54 4e-06 UniRef50_C9KQV9 NADH:flavin oxidoreductase n=1 Tax=Mitsuokella m... 54 6e-06 UniRef50_C7Q7H9 (S)-2-hydroxy-acid oxidase n=2 Tax=Actinomycetal... 54 6e-06 UniRef50_B0S343 NADH-dependent flavin oxidoreductase n=3 Tax=Clo... 54 6e-06 Sequences not found previously or not previously below threshold: UniRef50_Q010A0 tRNA-dihydrouridine synthase (ISS) n=2 Tax=Mamie... 97 6e-19 UniRef50_A4BCJ5 NifR3/Smm1 family protein n=1 Tax=Reinekea bland... 90 9e-17 UniRef50_Q9T0J6 tRNA-dihydrouridine synthase 3-like n=10 Tax=Mag... 88 2e-16 UniRef50_Q4P1U2 tRNA-dihydrouridine synthase 3 n=4 Tax=Eukaryota... 88 2e-16 UniRef50_P53759 tRNA-dihydrouridine synthase 1 n=19 Tax=Ascomyco... 88 2e-16 UniRef50_Q9KT00 tRNA-dihydrouridine synthase C n=75 Tax=Gammapro... 86 1e-15 UniRef50_A8PTG4 tRNA-dihydrouridine synthase 3 n=1 Tax=Malassezi... 86 1e-15 UniRef50_Q0CMD2 TRNA-dihydrouridine synthase 1 n=18 Tax=Leotiomy... 85 2e-15 UniRef50_B0XNW3 Dihydrouridine synthase family protein, putative... 85 2e-15 UniRef50_B9HRE5 Predicted protein (Fragment) n=11 Tax=Eukaryota ... 85 2e-15 UniRef50_Q4FQ57 Possible tRNA-dihydrouridine synthase n=24 Tax=G... 83 8e-15 UniRef50_O83945 Probable tRNA-dihydrouridine synthase n=4 Tax=Tr... 83 8e-15 UniRef50_C7NBC4 Dihydrouridine synthase DuS n=3 Tax=Leptotrichia... 83 9e-15 UniRef50_UPI00015B6197 PREDICTED: similar to CG10463-PA n=1 Tax=... 82 1e-14 UniRef50_A2QA98 Similarity to hypothetical protein SPBC36B7.04 -... 82 2e-14 UniRef50_Q9HGN6 tRNA-dihydrouridine synthase 1 n=1 Tax=Schizosac... 82 2e-14 UniRef50_Q08111 Probable tRNA-dihydrouridine synthase n=17 Tax=A... 82 2e-14 UniRef50_B8C389 Predicted protein n=1 Tax=Thalassiosira pseudona... 81 3e-14 UniRef50_D0MWM4 tRNA-dihydrouridine synthase 3 n=1 Tax=Phytophth... 81 4e-14 UniRef50_C5LCP2 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 81 5e-14 UniRef50_Q7RX85 Putative uncharacterized protein n=1 Tax=Neurosp... 80 7e-14 UniRef50_B8HFM3 TIM-barrel protein, nifR3 family n=4 Tax=Actinom... 80 8e-14 UniRef50_Q4D174 Dihydrouridine synthase (Dus), putative n=2 Tax=... 80 1e-13 UniRef50_A8F480 Dihydrouridine synthase DuS n=1 Tax=Thermotoga l... 80 1e-13 UniRef50_Q6C4K3 tRNA-dihydrouridine synthase 3 n=11 Tax=Saccharo... 80 1e-13 UniRef50_C5DS92 ZYRO0B14872p n=1 Tax=Zygosaccharomyces rouxii Re... 79 1e-13 UniRef50_Q86L21 Putative uncharacterized protein n=1 Tax=Dictyos... 78 2e-13 UniRef50_B6KUE9 Dihydrouridine synthase domain-containing protei... 78 3e-13 UniRef50_B6A9H7 Dihydrouridine synthase family protein n=2 Tax=E... 77 6e-13 UniRef50_Q4PBU9 Putative uncharacterized protein n=2 Tax=Ustilag... 77 7e-13 UniRef50_D1N5U0 Dihydrouridine synthase DuS n=1 Tax=Victivallis ... 76 8e-13 UniRef50_A4RM51 Putative uncharacterized protein n=2 Tax=Sacchar... 76 9e-13 UniRef50_Q8L940 Pyridoxal biosynthesis protein PDX1.3 n=173 Tax=... 76 1e-12 UniRef50_B2UM21 Dihydrouridine synthase DuS n=1 Tax=Akkermansia ... 75 3e-12 UniRef50_Q5CRK5 Ylr401cp-like protein with 2 CCCH domains plus D... 74 5e-12 UniRef50_B6K3Q0 tRNA dihydrouridine synthase Dus3 n=1 Tax=Schizo... 74 5e-12 UniRef50_A5DTS1 tRNA-dihydrouridine synthase 3 n=2 Tax=Saccharom... 73 1e-11 UniRef50_Q88KX0 tRNA-dihydrouridine synthase A n=482 Tax=Bacteri... 72 2e-11 UniRef50_A4AAB0 tRNA-dihydrouridine synthase C n=6 Tax=Gammaprot... 71 3e-11 UniRef50_Q06053 tRNA-dihydrouridine synthase 3 n=11 Tax=Saccharo... 71 3e-11 UniRef50_Q54QJ2 tRNA-dihydrouridine synthase 2-like protein n=1 ... 71 4e-11 UniRef50_C0SE35 tRNA-dihydrouridine synthase B n=1 Tax=Paracocci... 70 6e-11 UniRef50_Q6C002 YALI0F29205p n=1 Tax=Yarrowia lipolytica RepID=Q... 70 6e-11 UniRef50_A7EKL8 tRNA-dihydrouridine synthase 3 n=10 Tax=Leotiomy... 70 6e-11 UniRef50_Q4PIC3 Putative uncharacterized protein n=1 Tax=Ustilag... 70 7e-11 UniRef50_O67657 Indole-3-glycerol phosphate synthase n=2 Tax=Aqu... 70 7e-11 UniRef50_B7K0H0 Indole-3-glycerol phosphate synthase n=18 Tax=ce... 70 8e-11 UniRef50_C9RMC2 Dihydrouridine synthase DuS n=1 Tax=Fibrobacter ... 69 1e-10 UniRef50_P49572 Indole-3-glycerol phosphate synthase, chloroplas... 69 1e-10 UniRef50_Q9UTH9 tRNA-dihydrouridine synthase 3 n=1 Tax=Schizosac... 69 1e-10 UniRef50_A9KG09 NIFR3-like protein n=6 Tax=Coxiella burnetii Rep... 69 1e-10 UniRef50_B2V534 Dihydrouridine synthase family protein n=29 Tax=... 69 2e-10 UniRef50_C0QPX6 Indole-3-glycerol phosphate synthase n=5 Tax=Aqu... 69 2e-10 UniRef50_A6DP07 Indole-3-glycerol phosphate synthase n=1 Tax=Len... 69 2e-10 UniRef50_Q0CZL3 tRNA-dihydrouridine synthase 3 n=19 Tax=Leotiomy... 69 2e-10 UniRef50_A9KL43 Indole-3-glycerol phosphate synthase n=20 Tax=ce... 68 2e-10 UniRef50_Q22A31 TIM-barrel protein, yjbN family n=2 Tax=cellular... 68 3e-10 UniRef50_C6IIM3 Dihydrouridine synthase n=15 Tax=Bacteroides Rep... 68 3e-10 UniRef50_A6BK55 Putative uncharacterized protein n=1 Tax=Dorea l... 67 5e-10 UniRef50_A0EAZ6 Chromosome undetermined scaffold_87, whole genom... 67 7e-10 UniRef50_B1XI00 Dihydrouridine synthase A n=8 Tax=Chroococcales ... 66 8e-10 UniRef50_Q8EAJ0 tRNA-dihydrouridine synthase A n=121 Tax=Bacteri... 66 8e-10 UniRef50_B8MSD1 tRNA dihydrouridine synthase (Smm1), putative n=... 66 8e-10 UniRef50_Q7UKJ7 Indole-3-glycerol phosphate synthase n=5 Tax=Bac... 66 9e-10 UniRef50_A1ALX2 Indole-3-glycerol phosphate synthase n=4 Tax=Des... 66 9e-10 UniRef50_Q04VP3 TRNA-dihydrouridine synthase n=4 Tax=Leptospira ... 66 1e-09 UniRef50_A6G755 Indole-3-glycerol-phosphate synthase n=1 Tax=Ple... 66 1e-09 UniRef50_B1I3Z7 Indole-3-glycerol-phosphate synthase n=1 Tax=Can... 66 1e-09 UniRef50_A5USQ4 Indole-3-glycerol phosphate synthase n=8 Tax=Bac... 65 2e-09 UniRef50_Q0SMC0 Histidine phosphokinase/phophatase, putative n=1... 65 2e-09 UniRef50_UPI0001BC2F14 dihydrouridine synthase DuS n=1 Tax=Butyr... 65 2e-09 UniRef50_Q8CWK7 tRNA-dihydrouridine synthase A n=32 Tax=Gammapro... 65 2e-09 UniRef50_B7FYN1 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 65 2e-09 UniRef50_C9RDE9 Indole-3-glycerol-phosphate synthase n=1 Tax=Amm... 65 3e-09 UniRef50_C6NVP5 tRNA-dihydrouridine synthase A n=1 Tax=Acidithio... 64 3e-09 UniRef50_O31546 Probable tRNA-dihydrouridine synthase 2 n=107 Ta... 64 3e-09 UniRef50_A1AW94 TIM-barrel protein, yjbN family n=2 Tax=Gammapro... 64 3e-09 UniRef50_Q5SMC7 tRNA-dihydrouridine synthase n=3 Tax=Thermus Rep... 64 4e-09 UniRef50_B5RQ77 Histidine phosphokinase/phophatase, putative n=4... 64 5e-09 UniRef50_B7APY3 Putative uncharacterized protein n=1 Tax=Bactero... 64 6e-09 UniRef50_Q3AL94 Indole-3-glycerol phosphate synthase n=13 Tax=Cy... 64 6e-09 UniRef50_A8ZX83 Dihydrouridine synthase DuS n=1 Tax=Desulfococcu... 63 7e-09 UniRef50_A2QAU6 tRNA-dihydrouridine synthase 3 n=6 Tax=Leotiomyc... 63 7e-09 UniRef50_B8P1L7 Predicted protein (Fragment) n=3 Tax=Basidiomyco... 63 7e-09 UniRef50_C9SVF6 tRNA-dihydrouridine synthase n=1 Tax=Verticilliu... 63 7e-09 UniRef50_C6J447 Indole-3-glycerol phosphate synthase n=1 Tax=Pae... 63 7e-09 UniRef50_D1CBJ4 Indole-3-glycerol-phosphate synthase n=1 Tax=The... 63 7e-09 UniRef50_B8ZUG3 Pyridoxal biosynthesis lyase pdxS n=332 Tax=cell... 63 8e-09 UniRef50_Q5ZVH8 Zinc binding TIM barrel protein, YjbN family n=6... 63 1e-08 UniRef50_A4J147 Indole-3-glycerol phosphate synthase n=1 Tax=Des... 63 1e-08 UniRef50_Q5HJT5 Probable tRNA-dihydrouridine synthase n=92 Tax=F... 63 1e-08 UniRef50_D0MHI1 Indole-3-glycerol-phosphate synthase n=1 Tax=Rho... 62 1e-08 UniRef50_Q0W625 Indole-3-glycerol phosphate synthase n=2 Tax=Eur... 62 2e-08 UniRef50_Q1ISJ1 Indole-3-glycerol phosphate synthase n=1 Tax=Can... 62 2e-08 UniRef50_B0GA01 Putative uncharacterized protein n=2 Tax=Clostri... 62 2e-08 UniRef50_D2LTR9 Indole-3-glycerol-phosphate synthase n=1 Tax=Bac... 62 2e-08 UniRef50_Q0JEG3 Os04g0278900 protein n=3 Tax=Oryza sativa RepID=... 62 2e-08 UniRef50_UPI0000586CAD PREDICTED: similar to Dus1l protein n=1 T... 62 2e-08 UniRef50_A8BQT4 tRNA dihydrouridine synthase, putative n=2 Tax=G... 62 2e-08 UniRef50_C3N6C8 Pyridoxal biosynthesis lyase pdxS n=28 Tax=cellu... 62 2e-08 UniRef50_C2KZB3 Indole-3-glycerol-phosphate synthase n=1 Tax=Ori... 61 3e-08 UniRef50_A5EVG3 Indole-3-glycerol phosphate synthase n=1 Tax=Dic... 61 3e-08 UniRef50_A9KRF8 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=... 61 3e-08 UniRef50_Q6AJ40 Putative uncharacterized protein n=1 Tax=Desulfo... 61 3e-08 UniRef50_B7J4N8 tRNA-dihydrouridine synthase A n=2 Tax=Acidithio... 61 3e-08 UniRef50_A7VEV6 Putative uncharacterized protein n=2 Tax=Clostri... 61 4e-08 UniRef50_A9UW45 Predicted protein n=1 Tax=Monosiga brevicollis R... 61 4e-08 UniRef50_C0EUE6 Putative uncharacterized protein n=1 Tax=Eubacte... 61 5e-08 UniRef50_C6CUD5 Indole-3-glycerol-phosphate synthase n=3 Tax=Bac... 61 5e-08 UniRef50_B8I0V0 Indole-3-glycerol phosphate synthase n=3 Tax=Fir... 61 5e-08 UniRef50_P32370 NADH-dependent flavin oxidoreductase n=4 Tax=Clo... 60 6e-08 UniRef50_A8ZZX0 Indole-3-glycerol phosphate synthase n=1 Tax=Des... 60 7e-08 UniRef50_Q72NP6 Indole-3-glycerol phosphate synthase n=4 Tax=Lep... 60 8e-08 UniRef50_A4E892 Putative uncharacterized protein n=4 Tax=Collins... 60 9e-08 UniRef50_P03964 Indole-3-glycerol phosphate synthase n=11 Tax=Ba... 60 9e-08 UniRef50_A5F2I8 Putative uncharacterized protein n=2 Tax=Vibrio ... 60 9e-08 UniRef50_A7NDQ7 tRNA dihydrouridine synthase n=17 Tax=Francisell... 59 1e-07 UniRef50_Q30SM1 Indole-3-glycerol phosphate synthase n=31 Tax=Ep... 59 1e-07 UniRef50_B1MZ90 tRNA-dihydrouridine synthase n=39 Tax=Bacteria R... 59 1e-07 UniRef50_C1F7P0 Indole-3-glycerol phosphate synthase n=1 Tax=Aci... 59 1e-07 UniRef50_B4U9S2 Indole-3-glycerol-phosphate synthase n=1 Tax=Hyd... 59 1e-07 UniRef50_Q6K306 cDNA clone:001-026-D08, full insert sequence n=1... 59 1e-07 UniRef50_B1YLS2 Indole-3-glycerol phosphate synthase n=77 Tax=Ba... 59 1e-07 UniRef50_Q1PZY3 Similar to NADH oxidase n=1 Tax=Candidatus Kuene... 59 1e-07 UniRef50_C4QXV9 Dihydrouridine synthase, member of a family of d... 59 1e-07 UniRef50_C9LSI3 Indole-3-glycerol phosphate synthase n=1 Tax=Sel... 59 2e-07 UniRef50_A4XEW5 NADH:flavin oxidoreductase/NADH oxidase n=2 Tax=... 59 2e-07 UniRef50_C1I264 Enoate reductase n=1 Tax=Clostridium sp. 7_2_43F... 59 2e-07 UniRef50_B5WIG7 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 59 2e-07 UniRef50_A4E8R9 Putative uncharacterized protein n=1 Tax=Collins... 59 2e-07 UniRef50_C0GDK9 Indole-3-glycerol-phosphate synthase n=1 Tax=Det... 59 2e-07 UniRef50_A8BQN9 Dihydrouridine synthase, putative n=2 Tax=Giardi... 59 2e-07 UniRef50_A5CW14 Indole-3-glycerol phosphate synthase n=3 Tax=Gam... 59 2e-07 UniRef50_Q9FI41 Emb|CAB87804.1 n=16 Tax=Embryophyta RepID=Q9FI41... 58 2e-07 UniRef50_C3WVD6 NADH oxidase n=2 Tax=Fusobacterium RepID=C3WVD6_... 58 3e-07 UniRef50_A7EHJ6 Putative uncharacterized protein n=1 Tax=Sclerot... 58 3e-07 UniRef50_Q0BTY5 Indole-3-glycerol phosphate synthase n=16 Tax=Al... 58 3e-07 UniRef50_UPI0001744BDA indole-3-glycerol-phosphate synthase n=1 ... 58 3e-07 UniRef50_B3JG84 Putative uncharacterized protein n=1 Tax=Bactero... 58 3e-07 UniRef50_B7GBC4 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 58 3e-07 UniRef50_A1HS67 Indole-3-glycerol-phosphate synthase n=4 Tax=Vei... 58 3e-07 UniRef50_P32382 NADH oxidase n=1 Tax=Thermoanaerobacter brockii ... 58 3e-07 UniRef50_B0C3E9 tRNA-dihydrouridine synthase A n=4 Tax=Bacteria ... 58 3e-07 UniRef50_Q3B2C7 Indole-3-glycerol phosphate synthase n=11 Tax=Ch... 58 4e-07 UniRef50_C0C2K5 Putative uncharacterized protein n=1 Tax=Clostri... 58 4e-07 UniRef50_B1ATU6 Dihydrouridine synthase 1-like (S. cerevisiae) (... 57 5e-07 UniRef50_C0QU30 Dihydroorotate dehydrogenase, catalytic subunit ... 57 6e-07 UniRef50_B4YSU4 BaiH n=2 Tax=Clostridium hylemonae RepID=B4YSU4_... 57 6e-07 UniRef50_B0TFP7 Indole-3-glycerol phosphate synthase n=2 Tax=Hel... 57 7e-07 UniRef50_Q3B2I1 Dihydroorotate oxidase B, catalytic subunit n=12... 57 8e-07 UniRef50_Q2S1Z5 Indole-3-glycerol phosphate synthase n=1 Tax=Sal... 57 8e-07 UniRef50_C8W1S8 Indole-3-glycerol-phosphate synthase n=1 Tax=Des... 57 8e-07 UniRef50_B0N8B0 Putative uncharacterized protein n=6 Tax=Bacteri... 56 8e-07 UniRef50_Q2LUD7 Indole-3-glycerol phosphate synthase n=1 Tax=Syn... 56 8e-07 UniRef50_B7DTY5 2-nitropropane dioxygenase NPD n=1 Tax=Alicyclob... 56 9e-07 UniRef50_A4SG41 Indole-3-glycerol phosphate synthase n=2 Tax=Bac... 56 9e-07 UniRef50_C0QKD0 Dhs1 n=1 Tax=Desulfobacterium autotrophicum HRM2... 56 1e-06 UniRef50_Q814I1 GMP reductase n=106 Tax=Bacteria RepID=GUAC_BACCR 56 1e-06 UniRef50_Q0AJQ0 Indole-3-glycerol phosphate synthase n=5 Tax=Pro... 56 1e-06 UniRef50_B5GVV9 Isopentenyl-diphosphate delta-isomerase II n=2 T... 56 1e-06 UniRef50_Q5KGP0 Putative uncharacterized protein n=3 Tax=Filobas... 56 1e-06 UniRef50_Q0EWN8 Indole-3-glycerol phosphate synthase n=1 Tax=Mar... 56 1e-06 UniRef50_C0YT12 Possible 2-nitropropane dioxygenase n=3 Tax=Bact... 56 1e-06 UniRef50_C5XE16 Putative uncharacterized protein Sb02g039250 n=1... 56 2e-06 UniRef50_A8MDA4 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 56 2e-06 UniRef50_A0N0V5 Putative NADH-dependent flavin oxidoreductase n=... 56 2e-06 UniRef50_Q1AU90 Indole-3-glycerol phosphate synthase n=1 Tax=Rub... 56 2e-06 UniRef50_B2V726 Dihydroorotate dehydrogenase n=2 Tax=Aquificales... 55 2e-06 UniRef50_C1E9S0 Predicted protein n=2 Tax=cellular organisms Rep... 55 2e-06 UniRef50_A4EBM5 Putative uncharacterized protein n=2 Tax=Bacteri... 55 2e-06 UniRef50_B2RZT4 NIFR3-like protein n=23 Tax=Borrelia RepID=B2RZT... 55 2e-06 UniRef50_B2S5Z1 Indole-3-glycerol phosphate synthase n=45 Tax=Al... 55 2e-06 UniRef50_O05413 Probable nitronate monooxygenase n=3 Tax=Bacillu... 55 2e-06 UniRef50_B5H1G9 Indole-3-glycerol-phosphate synthase n=1 Tax=Str... 55 2e-06 UniRef50_O28668 Anthranilate phosphoribosyltransferase n=4 Tax=E... 55 2e-06 UniRef50_B8DSF9 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 55 3e-06 UniRef50_A1ZW11 Oxidoreductase, 2-nitropropane dioxygenase famil... 55 3e-06 UniRef50_C0ZCE3 Indole-3-glycerol phosphate synthase n=2 Tax=Bac... 55 3e-06 UniRef50_C9XJU2 Dihydroorotate dehydrogenase, catalytic subunit ... 55 3e-06 UniRef50_Q4N9T6 TRNA-dihydrouridine synthase A, putative n=2 Tax... 55 3e-06 UniRef50_C0W3B1 Indole-3-glycerol-phosphate synthase n=1 Tax=Act... 55 3e-06 UniRef50_Q47C62 Dihydroorotate dehydrogenase n=3 Tax=Proteobacte... 55 3e-06 UniRef50_C7P1Q4 Indole-3-glycerol-phosphate synthase n=5 Tax=Hal... 54 3e-06 UniRef50_B8F9B4 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 54 3e-06 UniRef50_C4G9N4 Putative uncharacterized protein n=1 Tax=Shuttle... 54 3e-06 UniRef50_A7HV28 2-nitropropane dioxygenase NPD n=1 Tax=Parvibacu... 54 3e-06 UniRef50_C8WL92 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 54 4e-06 UniRef50_Q5V138 Indole-3-glycerol phosphate synthase n=7 Tax=Hal... 54 4e-06 UniRef50_C1KVS7 Indole-3-glycerol phosphate synthase n=28 Tax=Ba... 54 4e-06 UniRef50_P96192 tRNA-dihydrouridine synthase C n=1 Tax=Azotobact... 54 4e-06 UniRef50_B0SFJ9 Indole-3-glycerol-phosphate synthase n=3 Tax=Lep... 54 4e-06 UniRef50_Q465F6 Indole-3-glycerol phosphate synthase n=3 Tax=Met... 54 4e-06 UniRef50_C0W0L6 Indole-3-glycerol-phosphate synthase n=1 Tax=Act... 54 4e-06 UniRef50_B1ZS75 2-nitropropane dioxygenase NPD n=2 Tax=Bacteria ... 54 4e-06 UniRef50_C9MVS9 tRNA dihydrouridine synthase A n=2 Tax=Leptotric... 54 4e-06 UniRef50_C0D995 Putative uncharacterized protein (Fragment) n=1 ... 54 4e-06 UniRef50_UPI000186E4C9 tRNA-dihydrouridine synthase, putative n=... 54 4e-06 UniRef50_Q2NFE8 TrpC n=1 Tax=Methanosphaera stadtmanae DSM 3091 ... 54 4e-06 UniRef50_A9W195 Dihydrouridine synthase DuS n=41 Tax=Bacteria Re... 54 4e-06 UniRef50_C7LZ72 Indole-3-glycerol-phosphate synthase n=1 Tax=Aci... 54 4e-06 UniRef50_A4T8N9 2-nitropropane dioxygenase, NPD n=9 Tax=Mycobact... 54 4e-06 UniRef50_C5R8W8 Dihydroorotate dehydrogenase B, catalytic subuni... 54 4e-06 UniRef50_Q6CF62 YALI0B09999p n=1 Tax=Yarrowia lipolytica RepID=Q... 54 5e-06 UniRef50_UPI00006A2AD3 UPI00006A2AD3 related cluster n=1 Tax=Xen... 54 5e-06 UniRef50_B7CB02 Putative uncharacterized protein n=2 Tax=Erysipe... 54 5e-06 UniRef50_Q1GF08 L-lactate dehydrogenase (Cytochrome) n=10 Tax=Rh... 54 5e-06 UniRef50_C1XX24 Fructose-bisphosphate aldolase n=1 Tax=Meiotherm... 54 5e-06 UniRef50_D2RDD9 Photosystem I assembly BtpA n=1 Tax=Archaeoglobu... 54 5e-06 UniRef50_B8FCV2 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 54 6e-06 UniRef50_A4FBL7 Dihydroorotate dehydrogenase n=1 Tax=Saccharopol... 54 6e-06 UniRef50_C8PYI7 N-(5'-phosphoribosyl)anthranilate isomerase n=1 ... 54 6e-06 UniRef50_C7HAV2 Dihydrouridine synthase family protein n=2 Tax=F... 54 6e-06 UniRef50_B4U1B5 Enoyl-[acyl-carrier-protein] reductase (FMN) n=2... 54 6e-06 UniRef50_B0K0E3 NADH:flavin oxidoreductase/NADH oxidase n=12 Tax... 54 6e-06 UniRef50_A0AMC4 Putative N-acetylmannosamine-6-phosphate 2-epime... 54 6e-06 UniRef50_Q55710 Thiazole synthase n=253 Tax=cellular organisms R... 54 6e-06 UniRef50_UPI0001BCA063 tRNA-dihydrouridine synthase A n=1 Tax=Ps... 54 6e-06 UniRef50_C6XGY7 tRNA-dihydrouridine synthase A n=1 Tax=Candidatu... 54 6e-06 UniRef50_C7T9L6 Fructose-bisphosphate aldolase n=4 Tax=Bacilli R... 54 6e-06 >UniRef50_B2V9M8 Imidazole glycerol phosphate synthase subunit hisF n=10 Tax=Bacteria RepID=HIS6_SULSY Length = 252 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 121/257 (47%), Positives = 159/257 (61%), Gaps = 5/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV G+VVKGV F N GD V +A Y +EGADELVF DITASS+ R Sbjct: 1 MLAKRIIPCLDVDKGRVVKGVNFVNLIDAGDPVEIASVYDKEGADELVFLDITASSEDRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V + AE + +P V GG++SLED K+L GADK+SIN+ A+ +P+L+ A RF Sbjct: 61 IILDVVKKTAETVFMPLTVGGGVRSLEDIRKLLENGADKVSINTAAVKNPSLVENAAIRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IVV ID E T + ++W + V+ GAGEI+L M+ Sbjct: 121 GSSTIVVAIDAKKVGEN-----KWEVYIHGGRTPTGIDAIEWAKAVESLGAGEILLTSMD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG ++GYD+E K V E +P+IASGGAG ++HF EAF D LAAS+FH + I Sbjct: 176 KDGTKSGYDIELTKAVSEAVKIPVIASGGAGNVQHFYEAFEYGKADACLAASLFHFKEIE 235 Query: 241 IGELKAYLATQGVEIRI 257 I ELK YL +G+ +R+ Sbjct: 236 ISELKNYLKNKGINVRL 252 >UniRef50_Q12UY6 Imidazole glycerol phosphate synthase subunit hisF n=354 Tax=cellular organisms RepID=HIS6_METBU Length = 273 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 110/273 (40%), Positives = 152/273 (55%), Gaps = 16/273 (5%) Query: 1 MLAKRIIPCLDV----RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS 56 ML KRIIPCLDV G VVKGV+F + + GD V LAKRY E+GADELVF DITAS Sbjct: 1 MLTKRIIPCLDVTLDASGGTVVKGVEFVDLKKAGDPVDLAKRYNEQGADELVFLDITASH 60 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +GR + R A + IP V GGI S+ED +IL GADK+S+N+ A+ +P I Sbjct: 61 EGRSTMIDVIERTANEVFIPLTVGGGINSVEDVRQILRAGADKVSVNTAAVKNPEFIREA 120 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHV------------NQYTGDESRTRVTQWETLDWVQ 164 ++ FG QCIV ID + + T +T+ W + Sbjct: 121 SNIFGSQCIVTAIDCKRNLDVENNQDKTILELEDGTLAWYEVVIYGGREPTGLDTVQWAK 180 Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 +V++ G+GEI+L MN+DG +G+D+ KK+ E +P+IASGG G EH + F D Sbjct: 181 KVEELGSGEILLTSMNRDGTYDGFDIPITKKLSEELDIPIIASGGVGNPEHMYKGFVDGK 240 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D LAAS+FH + ++K L + + +R+ Sbjct: 241 ADAGLAASIFHFGEYTVRDVKEALRAKNIPVRL 273 >UniRef50_C7P985 Imidazole glycerol phosphate synthase subunit hisF n=5 Tax=cellular organisms RepID=C7P985_METFA Length = 272 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 114/272 (41%), Positives = 159/272 (58%), Gaps = 14/272 (5%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KRIIPCLD++DG+VVKG +F N GD V LA+ Y +EGADELVF DITAS++ R Sbjct: 1 MLTKRIIPCLDIKDGRVVKGTKFLNLRDAGDPVELAQLYDDEGADELVFLDITASAEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R AE + IP V GGIKS+ED KIL GADKISIN+ A+ +P LI ++ F Sbjct: 61 IIIDVVERTAEKVFIPLTVGGGIKSIEDFRKILRAGADKISINTAAVKNPNLIKEASEIF 120 Query: 121 GVQCIVVGIDTWYDAETGKY--------------HVNQYTGDESRTRVTQWETLDWVQEV 166 G QC+VV ID + + T + ++W ++V Sbjct: 121 GSQCVVVAIDAKRHYINEDEIDKIDKNVVKVEDGYCWFEVYIYGGRKETGIDAIEWAKKV 180 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 ++ GAGEI+L +++DG ++GYDL +++ + +P+IASGG G EH EAF D Sbjct: 181 EELGAGEILLTSIDKDGTKSGYDLILTREISKSVKLPVIASGGCGKPEHVYEAFVHGKAD 240 Query: 227 GALAASVFHKQIINIGELKAYLATQGVEIRIC 258 AL A + H + I E+K Y A +G+ +R+ Sbjct: 241 AALMAGILHYKEYTIEEIKKYCADRGIPMRLL 272 >UniRef50_B0TDM7 Imidazole glycerol phosphate synthase subunit hisF n=157 Tax=root RepID=HIS6_HELMI Length = 261 Score = 230 bits (586), Expect = 4e-59, Method: Composition-based stats. Identities = 121/257 (47%), Positives = 158/257 (61%), Gaps = 1/257 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV G+VVKG F N GD V LA Y +EGADE+VF DITASSDGR Sbjct: 1 MLAKRIIPCLDVHGGRVVKGTNFVNLRDAGDPVELAAVYDKEGADEVVFLDITASSDGRA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R AE + IPF V GG++S+ED ++L GADKIS+N+ A+ P LI+ A +F Sbjct: 61 IMLDVVRRTAEEVFIPFTVGGGLRSVEDIREMLKAGADKISLNTSAVQTPKLISDGAWKF 120 Query: 121 GVQCIVVGID-TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 G QCIVV ID G + T + L+W + V++ GAGEI+L M Sbjct: 121 GSQCIVVAIDARRRRDAEGNPVEGWEVYTHGGRKPTGIDVLEWARRVEELGAGEILLTSM 180 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG ++GYD+ + V E +P+IASGG G ++H +E D ALAAS+FH + Sbjct: 181 DKDGTKDGYDIPLTRAVSEAVTIPVIASGGVGNLDHIVEGLTVGKADAALAASIFHYREY 240 Query: 240 NIGELKAYLATQGVEIR 256 IGE K YL +GV +R Sbjct: 241 TIGETKEYLRERGVHVR 257 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 37/111 (33%) Query: 21 VQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA 80 D++ A+R E GA E++ + D V+E + IP + Sbjct: 149 THGGRKPTGIDVLEWARRVEELGAGEILLTSMDKDGTKDGYDIPLTRAVSEAVTIPVIAS 208 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 GG+ +L+ + L+ G ++ + + + V Sbjct: 209 GGVGNLDHIVEGLTVGKADAALAASIFHYREYTIGETKEYLRERGVHVRQW 259 >UniRef50_A6UUZ9 Imidazole glycerol phosphate synthase subunit hisF n=27 Tax=cellular organisms RepID=HIS6_META3 Length = 275 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 18/275 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KRIIPCLD+++G+VVKG F GD V L+K Y E+GADELVF DI AS + R Sbjct: 1 MLTKRIIPCLDIKNGRVVKGTNFVELRDAGDPVELSKIYNEQGADELVFLDIGASHEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + A+ + IP V GGI++ +D +IL GADKIS+N+ A+ +P LI + ++ + Sbjct: 61 IIEHLVEKTADQVFIPLTVGGGIRTTDDFRRILRAGADKISVNTAAIHNPDLIKQSSELY 120 Query: 121 GVQCIVVGIDTWYDAET------------------GKYHVNQYTGDESRTRVTQWETLDW 162 G QC+VV ID+ + + T + ++W Sbjct: 121 GAQCVVVAIDSKRHYVNEEDLDSKQLEDKNVVKVDKNKYCWFEVFIYGGRKETGIDAIEW 180 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 + ++ GAGEI+L M+ DG ++GYD+E K + +P+IASGG G +H + F Sbjct: 181 AKTAEELGAGEILLTSMDADGTKDGYDIELTKSISTHIKLPVIASGGCGAPQHIHQVFEY 240 Query: 223 ADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D AL AS+ H + +GELK Y + + +R+ Sbjct: 241 GKADAALMASILHYREYTVGELKKYCMDKNIPMRL 275 >UniRef50_C4L176 Imidazole glycerol phosphate synthase subunit hisF n=28 Tax=Bacteria RepID=HIS6_EXISA Length = 255 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 116/258 (44%), Positives = 159/258 (61%), Gaps = 8/258 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML +RIIPCLDV++G+VVKG++F IGD V +AK Y E GADELVF DITAS++ R Sbjct: 1 MLKRRIIPCLDVKEGRVVKGIEFVQLRDIGDPVEIAKYYDESGADELVFLDITASTERRQ 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 VS VA + IP V GGI+SLED + +L GADK+S+N+ A+ P+LI ADRF Sbjct: 61 TMLDVVSAVARKVFIPLTVGGGIRSLEDISSLLKAGADKVSLNTLAVESPSLIREAADRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIVV ID + + + T ++W ++V GAGE+++ MN Sbjct: 121 GSQCIVVAIDVKFKDGEYYVYTYG------GKQKTDLLAVEWAKQVAALGAGELLVTSMN 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 QDG ++GYDL L+++REV +P+IASGGAG EH +EA VD AL AS+ H + Sbjct: 175 QDGKQSGYDLSILEQLREVVDIPIIASGGAGNAEHVVEALEK--VDAALLASILHDRKTT 232 Query: 241 IGELKAYLATQGVEIRIC 258 + E+K + + +R Sbjct: 233 VEEVKHVCKSHNLPMRFV 250 >UniRef50_C9KKW6 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKW6_9FIRM Length = 252 Score = 222 bits (567), Expect = 7e-57, Method: Composition-based stats. Identities = 112/257 (43%), Positives = 152/257 (59%), Gaps = 5/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M KRIIPCLDV+DG+VVKG F GD V LA RY EE ADELVF DITASSD R Sbjct: 1 MYTKRIIPCLDVKDGRVVKGTNFVGLRDAGDPVELAARYDEERADELVFLDITASSDNRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + A + IPF V GGI+++ED ++L GADK S+N+ A+ +P L+ A++F Sbjct: 61 TMVNVARDCASKVFIPFTVGGGIRTVEDMRRMLKAGADKTSLNTAAVKNPGLLKEGAEKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+ +D T + L+WV++ GAGEI+L M+ Sbjct: 121 GRQCMVLAVDARRAGN-----HRWEVYVNGGRTPTGLDCLEWVKKAVALGAGEILLTSMD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG ++GYD+E + V + +VP+IASGGAG +EHF + D LAASVFH Sbjct: 176 ADGTKDGYDIELTRAVSDAVNVPVIASGGAGKLEHFYDVLTLGHADAVLAASVFHYGQFT 235 Query: 241 IGELKAYLATQGVEIRI 257 + ++K YL ++GVE+R Sbjct: 236 VRQVKEYLQSRGVEVRF 252 >UniRef50_B9DIP1 Imidazole glycerol phosphate synthase subunit hisF n=224 Tax=Bacteria RepID=HIS6_STACT Length = 254 Score = 213 bits (543), Expect = 5e-54, Method: Composition-based stats. Identities = 106/256 (41%), Positives = 160/256 (62%), Gaps = 4/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M+ KRIIPCLDV+DG+VVKGVQF+ IGD V LA Y E ADELVF DI+ + +G Sbjct: 1 MIKKRIIPCLDVKDGRVVKGVQFKGLRDIGDPVALAAYYNAELADELVFLDISRTENGHQ 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + A + IP + GGI S +D + +L GADK+S+NS AL +P+L+ +++F Sbjct: 61 MMLDIIEETASKLFIPLTIGGGISSTDDISTLLKHGADKVSLNSSALRNPSLVKEASEKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI + +D ++ E + + + T LDWV++V+ GAGE+++ M+ Sbjct: 121 GSQCICIAVDAKWEDERNDWFCYTHG----GKQPTDIRVLDWVRQVEYLGAGELLVTSMD 176 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGV+ G+D + L ++ V +P+IASGG G +HF++ F+ +V LAAS+FH + Sbjct: 177 YDGVKQGFDHQLLNQINTVVSIPVIASGGGGNAQHFVDLFQQTNVSAGLAASIFHDKETT 236 Query: 241 IGELKAYLATQGVEIR 256 IG +K YL +GV++R Sbjct: 237 IGAVKTYLKDKGVDVR 252 >UniRef50_Q8DJN7 Imidazole glycerol phosphate synthase subunit hisF n=55 Tax=cellular organisms RepID=HIS6_THEEB Length = 281 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 111/256 (43%), Positives = 149/256 (58%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRI+PCLDV+ G+VVKGV F N GD V LA+ Y GADELVF DITA+ + R Sbjct: 2 MLAKRILPCLDVKAGRVVKGVNFVNLRDAGDPVELAQAYNAAGADELVFLDITATHEERN 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R A+ + IP V GGI+SL +L GADK+S+NS A+ P L+ + +DRF Sbjct: 62 ILIDVVYRTADQVFIPLTVGGGIQSLTMIKDLLRAGADKVSLNSAAVRQPDLVNQASDRF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIVV ID + + T + + W E+ KRGAGE+++ M+ Sbjct: 122 GAQCIVVAIDARREPDCAPDQPRWQVYVRGGREATGLDAVAWAVEMAKRGAGELLVTSMD 181 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG + GYDLE + + E +P+IASGGAGT EH A + + AL AS+ H + Sbjct: 182 ADGTQAGYDLELTRAIAERVEIPVIASGGAGTCEHIRAALVEGKAEAALLASLLHYGQLT 241 Query: 241 IGELKAYLATQGVEIR 256 I ++K YL V +R Sbjct: 242 IAQIKGYLHQHQVPVR 257 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 1/100 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + ++ Q GA E+V + ++ + + + +PL GG ++ Sbjct: 32 DPVELAQAYNAAGADELVFLDITATHEERNILIDVVYRTADQVFIPLTVGGGIQSLTMIK 91 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + R A D S +Q + + Q + + I Sbjct: 92 DLLR-AGADKVSLNSAAVRQPDLVNQASDRFGAQCIVVAI 130 >UniRef50_Q1PWX6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWX6_9BACT Length = 243 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++ G+ V+ Q + E D V +AK + ++GA L D+ + DG Sbjct: 1 MIIFPAIDLKGGKCVRLTQGKKDEETVFSDDPVDMAKSWEDQGAQYLHVVDLDGAFDGLP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + S V ++ I+IP GG+++ E +L G +++ I + AL P+ + L F Sbjct: 61 KNLSIVEQIVNNINIPIEFGGGLRTTESVKSVLDLGVERVIIGTKALDSPSWVEELCSLF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V G N T +++ +D+ +E++K I+ ++ Sbjct: 121 PGRVAV-----------GIDAKNGKVAVHGWTSLSEKTAIDFAREMEKFSPCAIIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++E LK++ P+IASGG +++ E V+G + + I Sbjct: 170 KDGMLQGPNIESLKELLSSIKTPVIASGGISSLKDI-EYICQLPVEGMIVGKALYTGHIK 228 Query: 241 IGELKAYLAT 250 E K + Sbjct: 229 FSEAKQLCDS 238 >UniRef50_B8FFL4 Imidazole glycerol phosphate synthase subunit hisF n=19 Tax=cellular organisms RepID=HIS6_DESAA Length = 260 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 111/256 (43%), Positives = 157/256 (61%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML+KR+I CLDVRDG+ KG++F+ + IGD V +A+ Y E G DELVFYDITAS + R Sbjct: 1 MLSKRVIVCLDVRDGKTTKGIKFKGNVDIGDPVDMARVYYEAGCDELVFYDITASHEKRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V RVAE I IPF V GGI S+ED +L GA+KIS+NS A+ +P +IT+ A+ F Sbjct: 61 IMIDVVRRVAETIFIPFSVGGGISSVEDMRDVLLAGAEKISVNSAAVKNPKIITQGAEAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+G+D ++ K + L W QE ++ GAGEI LN ++ Sbjct: 121 GNQCVVLGMDVKKVEKSEKIPSGYEIVINGGRTYMGIDALWWAQEGERLGAGEICLNSID 180 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG + GY+LE + E ++P+IASGG G +H + ++ D AL AS+ H Sbjct: 181 ADGTKEGYELELTALISENVNIPVIASGGGGIPQHLGDVLKEGKADAALIASMVHYGTYT 240 Query: 241 IGELKAYLATQGVEIR 256 I E+K +L +QG+ +R Sbjct: 241 IPEIKDHLKSQGISVR 256 >UniRef50_B5YIB7 Imidazole glycerol phosphate synthase subunit hisF n=5 Tax=cellular organisms RepID=HIS6_THEYD Length = 278 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 118/278 (42%), Positives = 161/278 (57%), Gaps = 21/278 (7%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV+DG+VVKGV F N GD V A Y EE ADELVF D+TAS + R Sbjct: 1 MLAKRIIPCLDVKDGRVVKGVNFLNLRDAGDPVENALYYNEEEADELVFLDVTASHEKRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R A V+ +P V GGIKSL+D +L+ GADK+SIN+ A+ DP I + + RF Sbjct: 61 IIIDVVERTASVVFMPLTVGGGIKSLDDIRDLLNAGADKVSINTTAVKDPYFIQKASTRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT---------------------QWET 159 G QCIV+ ID + ++ + Sbjct: 121 GSQCIVIAIDAKRVDKNFNPKAYPPESWFDDKELSDVLYKEDSRFVLSTHGGRLMRPIDA 180 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 + W +++++ GAGEI+L M++DG + GYD+E + + E +P+IASGGAGT+EH EA Sbjct: 181 IAWAKKMEEFGAGEILLTSMDRDGTKEGYDIELTRAISEAVSIPVIASGGAGTLEHLYEA 240 Query: 220 FRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 F A D ALAAS+FH + +I E K +L +G+ +RI Sbjct: 241 FAYAKADAALAASIFHFREYSIREAKEFLRQKGIPVRI 278 >UniRef50_A5FQU7 Histidine biosynthesis protein n=5 Tax=Dehalococcoides RepID=A5FQU7_DEHSB Length = 268 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 88/257 (34%), Positives = 139/257 (54%), Gaps = 1/257 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M +IIPCLDV+DG+VVK ++F + D A Y+++GADEL F DITA+ + Sbjct: 1 MKPIKIIPCLDVKDGRVVKEIKFTDMADARDPAEAAFVYSKQGADELAFLDITATIENSS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + WV ++ +P GGI++L+D + + G +++N+ + I + RF Sbjct: 61 IHTDWVKKIISKTSLPLIAGGGIRNLQDIENLFTLGVSNVALNTITPQNQEFIRKAVARF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I+V ID + + + E +DW ++V+ GAG I+L + Sbjct: 121 GSERIIVAIDGIKNPPGNGHPRLETVMPN-GDDTHNLELVDWAKQVEALGAGAILLTSKD 179 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG ++G+D+E ++ V +P+IASGGAG +E A + LAASVFH IIN Sbjct: 180 TDGTKDGFDMEMIRSVTRAVSIPVIASGGAGKLEDMYAAIIEGKAQAVLAASVFHSGIIN 239 Query: 241 IGELKAYLATQGVEIRI 257 I ELK YL ++G+ + I Sbjct: 240 ISELKTYLHSKGIPVNI 256 Score = 46.8 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 41/137 (29%), Gaps = 11/137 (8%) Query: 5 RIIPCLD-VRDG--------QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS 55 RII +D +++ + V + + +V AK+ GA ++ Sbjct: 124 RIIVAIDGIKNPPGNGHPRLETV-MPNGDDTHNLE-LVDWAKQVEALGAGAILLTSKDTD 181 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 D + V + IP +GG LED + G + + + + Sbjct: 182 GTKDGFDMEMIRSVTRAVSIPVIASGGAGKLEDMYAAIIEGKAQAVLAASVFHSGIINIS 241 Query: 116 LADRFGVQCIVVGIDTW 132 + + Sbjct: 242 ELKTYLHSKGIPVNIPH 258 >UniRef50_Q18JI3 Imidazole glycerol phosphate synthase subunit hisF n=36 Tax=cellular organisms RepID=HIS6_HALWD Length = 270 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 109/269 (40%), Positives = 143/269 (53%), Gaps = 13/269 (4%) Query: 1 MLAKRIIPCLDVR-----DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS 55 ML KRIIPC+DV + V G+ F + E GD V +AK+Y GADE VF DITAS Sbjct: 1 MLTKRIIPCIDVDLDEDGNPAVYTGINFEDLEYTGDPVEMAKQYNMAGADEFVFLDITAS 60 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + GR VSRVA+ I IP V GGI++ +D L GADK+SIN+ AL P LIT Sbjct: 61 AVGRETMLETVSRVADEIFIPLTVGGGIRTRDDIKSTLRAGADKVSINTAALETPELITT 120 Query: 116 LADRFGVQCIVVGIDTWYDAETG--------KYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 A FG QCIV+ +D + + T + L+WV E + Sbjct: 121 GASAFGSQCIVISVDARRRFDEQGENYLSVDGESCWFECTVKGGREGTGIDVLEWVTEAE 180 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 RGAGE+ +N ++ DG ++GYD+ V + P+IAS G G+ E F +A D Sbjct: 181 TRGAGELFINSIDADGTQDGYDIPLTSAVCDAVSTPVIASSGCGSPADMHEVFTEAGADA 240 Query: 228 ALAASVFHKQIINIGELKAYLATQGVEIR 256 LAAS+FH +I K YL +GV IR Sbjct: 241 GLAASIFHFGEYSIEATKEYLDERGVPIR 269 >UniRef50_A0AG16 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Bacteria RepID=HIS4_LISW6 Length = 240 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D+++GQ V+ Q + + D + AK +A GA L D+ + +GR Sbjct: 1 MQIFPAIDLKNGQCVRLFQGDFSKKMIVNEDPIAQAKAFATGGATYLHIVDLDGALEGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + ++ E +P V GGI+SL L G D++ I S AL +P + ++ Sbjct: 61 VNLEIIQKMKEAATVPVQVGGGIRSLAQVDYYLDSGIDRVIIGSAALTNPDFLHAAVQKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + V G N Y V+Q LD ++++K G I+ ++ Sbjct: 121 GPKIAV-----------GIDAKNGYVATSGWLEVSQVNYLDLAKQMEKVGVETIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G +LEQ+ +++ ++ LIASGG + EA + GA+A + I+ Sbjct: 170 RDGTLTGPNLEQMAALQKHVNIHLIASGGVSSRADL-EALSQLGLYGAIAGKALYNGHIS 228 Query: 241 IGELKA 246 + ++ Sbjct: 229 MSDVTE 234 >UniRef50_A2BQT3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=10 Tax=Cyanobacteria RepID=HIS4_PROMS Length = 255 Score = 207 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 113/256 (44%), Gaps = 16/256 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +G+ V+ + + + A+ + EGA + D+ A+ G Sbjct: 1 MDLIPAIDLMNGKCVRLFKGDFNKRKDFAKEPHEQAEFWEREGAKYIHIVDLDAAKTGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++A+ ++IP + GGI+S E ++ S+G +K+ + + A+ + L+ L+++F Sbjct: 61 TNDKSIKKIAKTVNIPIQIGGGIRSQERIEQLFSYGVEKVIMGTSAIENKELVKDLSNKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + IV G + + D V+E ++ +N Sbjct: 121 PGRIIV-----------GIDAKDGKVSTRGWLEQSNIFATDLVKEFSSFKIASFIVTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 DG G + E +K + E+ +P+IASGG G++ L F ++ + G + ++ Sbjct: 170 TDGTLEGTNEEFIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENK 229 Query: 239 INIGELKAYLATQGVE 254 I E L+ + + Sbjct: 230 FTINEANNVLSAERLN 245 >UniRef50_A8M910 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M910_CALMQ Length = 254 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 112/256 (43%), Positives = 152/256 (59%), Gaps = 8/256 (3%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L +RIIPC+DV VVKGV F ++GD V LA RY EEGADEL DITA+ GR Sbjct: 7 LVRRIIPCMDVDADIVVKGVNFEGLRVMGDPVELASRYEEEGADELFLLDITATVQGRST 66 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V VA + IP V GGI+ +EDA GADK+SIN+ A+ DP+++ +L+ +G Sbjct: 67 FLETVRNVAAAVSIPLGVGGGIRGMEDADAAFKAGADKVSINTAAVKDPSIVAKLSREYG 126 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 Q +VV IDT R T +DW + V++ GAGE+++ ++ Sbjct: 127 SQSVVVAIDTRRINNEW------RVFIMGGRRETLLNAVDWARTVEELGAGELLVTSIDA 180 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG R GYD+E +++ + ++P+IASGGAG HFLE + D ALAASVFH +INI Sbjct: 181 DGTRAGYDIELYRRLADAVNIPVIASGGAGEPSHFLEVLKY--ADAALAASVFHMGVINI 238 Query: 242 GELKAYLATQGVEIRI 257 LKAYL+ G+ +RI Sbjct: 239 SILKAYLSELGIRVRI 254 >UniRef50_B8D115 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halothermothrix orenii H 168 RepID=HIS4_HALOH Length = 237 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 14/247 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++DG V+ + V +A + + GA L D+ + G Sbjct: 1 MEVIPAVDIKDGSCVRLKKGDFNKRRVYSTSPVDVALYWEKHGASRLHIVDLDGAKSGWP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +A ++IP V GGI+SL+ K L G D+I + + AL +P L+ R D F Sbjct: 61 THLKTIREIALRVNIPLQVGGGIRSLKVIKKYLDSGVDRIILGTVALKNPELVKRALDNF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IVVG+D E + +Q D + E+++ G + +N Sbjct: 121 GSNRIVVGVD----------ARGGKVATEGWLKTSQVTVEDIISEMEEVGVKTFIYTDIN 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G D+E +K+V + +IASGG + + + + + A+ ++ + Sbjct: 171 RDGMLKGPDIEGIKRVLKSTKARIIASGGISSRQDLIN-LKAIGIKAAIVGKALYEGNLP 229 Query: 241 IGELKAY 247 + L Y Sbjct: 230 LEVLNQY 236 Score = 55.6 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 38/98 (38%), Gaps = 1/98 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 +D +K GA + + ++ L+ ++++ ++PL GG +++ Sbjct: 31 SPVDVALYWEKHGASRLHIVDLDGAKSGWPTHLKTIREIALRVNIPLQVGGGIRSLKVIK 90 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 + D+ VD + +V K + + + + Sbjct: 91 KYL-DSGVDRIILGTVALKNPELVKRALDNFGSNRIVV 127 >UniRef50_C4FS06 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FS06_9FIRM Length = 256 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 102/256 (39%), Positives = 158/256 (61%), Gaps = 1/256 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCL V +G+V GVQFR+ GD V A+RY +GADELV DITA+++ R Sbjct: 1 MLAKRIIPCLGVANGRVQNGVQFRDMVDAGDPVECAERYEIQGADELVLLDITATTEARK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V ++ + +P V GGI S+ED +++ GADK+SIN+ AL++P+LIT A +F Sbjct: 61 TFTDIVLNASDKVFMPLTVGGGITSVEDMTQLMKAGADKVSINTAALSNPSLITEGAKKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q IVV +D Y+ ++ + G + L+W +E RGAGE+++ ++ Sbjct: 121 GNQGIVVCLDVKYNPFEKMWYAYGH-GTSNDPGAQCKNALEWAKEAVDRGAGELLVTSID 179 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + G G+D+E + + EV VP+ A GGAG ++HF++ F +V GALA+++ H +++ Sbjct: 180 RHGTGLGFDIELYQALAEVVDVPVTAFGGAGNIQHFVDLFTKTNVTGALASALLHNKVLT 239 Query: 241 IGELKAYLATQGVEIR 256 I ++K L G+ +R Sbjct: 240 IKDIKKALHAAGIVVR 255 >UniRef50_C0Z6P5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Bacillales RepID=HIS4_BREBN Length = 249 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 101/256 (39%), Gaps = 16/256 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ + P +D+R G+ V+ Q + + +AKR+ E+GA + D+ + +G Sbjct: 1 MSFIVYPAIDIRGGKCVRLFQGDYGQETVYADSPLAMAKRWVEQGASWVHLVDLDGAKEG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + + + +A I +P V GGI++ E A L G ++ + + A+ D R+ Sbjct: 61 KPANAAIIKEIARSIPVPVQVGGGIRTEEQIADYLEAGVARVIVGTAAIEDEPFTKRILQ 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 G + + G N T + + + + GA + Sbjct: 121 NDGDKIAI-----------GLDCRNGLVATRGWLTTTDVQATELAKRLVTYGAETFIYTD 169 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHK 236 + +DG G ++E++ + +IASGG ++ L A V GA+ + Sbjct: 170 IARDGTMTGPNVEEIAALAMATGKSVIASGGVSQLDDLLTLATHASDGVSGAIVGKALYT 229 Query: 237 QIINIGELKAYLATQG 252 + E + + Sbjct: 230 DAFTLEEALQRMEGRE 245 >UniRef50_Q3ZYM9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=15 Tax=root RepID=HIS4_DEHSC Length = 244 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 15/250 (6%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 IIP +D+ G+ V+ Q D V A R+ GA L D+ ++DG+ Sbjct: 7 KIEIIPAIDILGGRCVRLFQGDYAQETVYSSDPVGTAMRWQSLGAPRLHVVDLDGAADGQ 66 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V+ + +A IP V GGI+S+E K+L G D++ + + A+ +P L+ + R Sbjct: 67 SVNFELIKEIANSALIPVEVGGGIRSMETVKKLLVAGVDRVILGTAAVENPELVKEICAR 126 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 + V N T+ + L+ + ++K G + + Sbjct: 127 YADSVAV-----------SIDARNGKVATRGWVTNTEIDALELARSMKKLGIRRFIYTDI 175 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG + + ++ + +VP+IASGG ++ H +D +GA+ + + Sbjct: 176 SRDGTLSEPNFAAIRDLISAINVPVIASGGVSSLSHL-RLLKDIGAEGAIVGKAIYTGDL 234 Query: 240 NIGELKAYLA 249 N+ L+ Sbjct: 235 NLKRAFEDLS 244 >UniRef50_B1I557 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Bacteria RepID=HIS4_DESAP Length = 262 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 16/257 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+R G+ V+ Q R + D V +A+ + E+GA L D+ + G+ Sbjct: 1 MLIIPAVDLRGGRCVRLFQGRADQETVYSTDPVAVARTWEEQGARRLHVVDLDGAFTGKP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V + + ++IP V GGI++ E+ L G D++ + + AL +P + + + Sbjct: 61 QNSGVVLDIVKSVNIPVQVGGGIRNPENVKCYLEHGVDRVILGTAALTNPEFLDAVVAAY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + +V G + + + + L +++E+ +RG +V + Sbjct: 121 GERIVV-----------GVDCRDGRVCVQGWEQTAATDVLPFLEELVRRGVRRVVFTDVK 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG G +LE++ +V + +IASGG +E VD + + Sbjct: 170 RDGTLEGPNLEEIARVAAHTELKVIASGGVSRLEDLRALKKLEHLGVDSVIIGKALYAGT 229 Query: 239 INIGELKAYLATQGVEI 255 I + E A + + Sbjct: 230 ITLAEALALERKEKDNV 246 >UniRef50_C4Z0A8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Clostridiales RepID=C4Z0A8_EUBE2 Length = 362 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 14/250 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQF---RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 R+ P +DV+DGQ V+ + +AK + E GA + D+ + G Sbjct: 1 MRLYPAIDVKDGQCVRLKKGLFNEVTVYSERPYEIAKGFEEAGAQFIHTVDLDGALKGHG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + ++ +++P + GGI++LE+ ++L G ++ I + A+ +P I DRF Sbjct: 61 VNAETIKKICSSVNVPVQMGGGIRTLENIQEVLDLGVYRVIIGTKAVENPDFIKAAIDRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IVVG+D + E +V+ L ++ G IV ++ Sbjct: 121 GAEHIVVGVD----------AKDGLVAIEGWEKVSDKTALSLALAMKDIGVQTIVYTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++EQ K + + + +IASGG M+ DA + GA+ +++ I+ Sbjct: 171 KDGMLAGPNVEQTKILSDKTGIDIIASGGMSCMDDLT-HINDAGIHGAIIGKAIYEKRID 229 Query: 241 IGELKAYLAT 250 + E + Sbjct: 230 LKEAVNLFES 239 Score = 70.7 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 1/99 (1%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + + ++ GA I ++ +G + E +KK+ +VP+ GG T+E+ Sbjct: 30 ERPYEIAKGFEEAGAQFIHTVDLDGALKGHGVNAETIKKICSSVNVPVQMGGGIRTLENI 89 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 E D V + + + I + + + Sbjct: 90 QEVL-DLGVYRVIIGTKAVENPDFIKAAIDRFGAEHIVV 127 >UniRef50_C7RAI6 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAI6_KANKD Length = 265 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 103/257 (40%), Positives = 151/257 (58%), Gaps = 2/257 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L R+I CLDV G+VVKGV F+ + +GD V LA RY E+GADE++F DI A+ + R Sbjct: 5 LKSRVIVCLDVAHGRVVKGVNFKGLQDMGDPVELAIRYQEQGADEIIFLDIKATLEQRAN 64 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V+RVAE + IPF V GG+ + D A+ L+ GADK+++NS A+ P L+ +A FG Sbjct: 65 ALEVVTRVAENLSIPFTVGGGLNTYADVAQFLNAGADKVALNSAAVKHPDLVDEIAKGFG 124 Query: 122 VQCIVVGID-TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 QC+VV +D + + +T + W+ E+++RGAGEI+L M+ Sbjct: 125 SQCVVVAVDLNQEQDQKTQGSSEYEVYINGGHTLTDLNAMQWLTEIEQRGAGEILLTAMH 184 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G+D E + +V + + +IASGGA HF + F A D ALAA +FH+ Sbjct: 185 RDGTGFGFDNELMSQVSKKLGIQVIASGGASKPAHFTDTF-LAGSDAALAAGMFHRGEFT 243 Query: 241 IGELKAYLATQGVEIRI 257 +G++K L GV +RI Sbjct: 244 VGQVKQELLNNGVAVRI 260 >UniRef50_D2RTG3 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=6 Tax=Euryarchaeota RepID=D2RTG3_9EURY Length = 244 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 119/249 (47%), Gaps = 14/249 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN--HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++IP +D++DG+VV+ VQ + GD V A+R+ +EGA+ L D+ + +G+ Sbjct: 7 FQVIPAVDMQDGEVVQLVQGERGTEKTYGDPVDAARRWLDEGAEALHLVDLDGAFEGQRA 66 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + V E +D+P + GGI++ +DA +L G D++ + + A+ +P ++ +++R Sbjct: 67 NGDAIDEVLETVDVPTQLGGGIRTADDAVDLLERGVDRVILGTAAVENPDIVAEISERHP 126 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 +V + E T +D + + GA I+ ++ Sbjct: 127 DSVVV-----------SLDAKDGEVVVEGWTEGAGISPVDAAERYAELGAAAILFTNVDV 175 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +G G E ++++ E VP+IASGG T+E A DA + S ++ + Sbjct: 176 EGKLEGVAAEPVRELVEATDVPVIASGGVATLEDV-RALEDAGAAAVVVGSALYEGKFTL 234 Query: 242 GELKAYLAT 250 E ++ + + Sbjct: 235 AEAQSAIDS 243 >UniRef50_C0RFX3 Imidazole glycerol phosphate synthase subunit hisF n=420 Tax=cellular organisms RepID=HIS6_BRUMB Length = 261 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 108/256 (42%), Positives = 149/256 (58%), Gaps = 1/256 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L R+IPCLDV+DG+VVKGV F + GD V A+ Y GADEL F DITASSD R Sbjct: 3 LKARVIPCLDVKDGRVVKGVNFVDLIDAGDPVEAARAYDAAGADELCFLDITASSDNRET 62 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V+R AE +P V GG++ + D K+L GADK+SIN+ A+ +P + AD+FG Sbjct: 63 IFDVVARTAEQCFMPLTVGGGVRQVADIRKLLLAGADKVSINTAAVKNPEFVAEAADKFG 122 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QCIVV ID + G+ + T + +++ Q+V GAGEI+L M++ Sbjct: 123 NQCIVVAIDAKKVSGAGENDHW-EIFTHGGRQPTGIDAVEFAQKVVDLGAGEILLTSMDR 181 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG + GYD+ + V + P+IASGG GT++H + RD LAAS+FH I Sbjct: 182 DGTKAGYDVALTRAVADSVRAPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTYTI 241 Query: 242 GELKAYLATQGVEIRI 257 GE K Y+A G+ +R+ Sbjct: 242 GEAKRYMAEAGIPMRL 257 >UniRef50_Q02YX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=8 Tax=Bacteria RepID=HIS4_LACLS Length = 246 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 113/255 (44%), Gaps = 15/255 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+++G+ V+ + + + + +A+++ + GA L D+ + G+ Sbjct: 1 MEIIPAIDLQNGEAVRLYKGDYDKKTVYSKNPLEIAQKFEQMGAKYLHLVDLDGAKLGQT 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADR 119 + V ++ + ++ + GGI++L+ + L G +++ + + A P + L + Sbjct: 61 RNLEIVRKIKDQTNLKIEIGGGIRNLDTVSLYLEQIGVERVILGTAAAEKPDFLKELLVK 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 +G+ IVVG+D + T L ++++++K G +++ + Sbjct: 121 YGLSRIVVGVDI----------REGFVSTSGWLEKTTLPYLSFLKDLEKIGVKTVIVTDI 170 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG G + E ++ + + +I SGG A D+D G + +++ I Sbjct: 171 SKDGTLTGPNFELYDEISKETSLDVIVSGGVKDSSDIQRA-ADSDFYGIIVGKAYYEGKI 229 Query: 240 NIGELKAYLATQGVE 254 N+ + + + Sbjct: 230 NLEKEFNHANKKNYP 244 >UniRef50_B4S4Z8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Chlorobiaceae RepID=HIS4_PROA2 Length = 261 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 57/246 (23%), Positives = 105/246 (42%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D++DG+ V+ + + + + +A + ++ A L D+ A+ G + Sbjct: 1 MLIIPAIDIKDGKCVRLTRGDFDQQKIYLDNPRDMAIIWRKQNAKMLHVVDLDAALTGTM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + +DIP V GGI+S ED + L G ++ I S A+ +P LI L F Sbjct: 61 VNFEKIREIVATLDIPVQVGGGIRSFEDVERYLGIGVSRVVIGSAAVTNPQLIAELLATF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 IVVGID N + T + + + E++K G I+ ++ Sbjct: 121 SPSQIVVGID----------AENGIPKIKGWTESSSMQDYELALEMKKLGVKRIIYTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG+ G E ++ + + ASGG + + + VD + ++ Sbjct: 171 RDGMMQGVGYESTRRFAMKAGMRVTASGGVTSSDDLKKLQTLEQYGVDSVIVGKALYESN 230 Query: 239 INIGEL 244 +L Sbjct: 231 FPCQQL 236 Score = 67.6 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 1/98 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 D +K+ A + + ++ + E+++++ +P+ GG + E Sbjct: 31 NPRDMAIIWRKQNAKMLHVVDLDAALTGTMVNFEKIREIVATLDIPVQVGGGIRSFEDVE 90 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 V + S I EL A + + + Sbjct: 91 RYLG-IGVSRVVIGSAAVTNPQLIAELLATFSPSQIVV 127 >UniRef50_C4ZLR4 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Thauera sp. MZ1T RepID=C4ZLR4_THASP Length = 226 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 95/257 (36%), Positives = 139/257 (54%), Gaps = 31/257 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV+ G+VVKGV F GD V +A+RY E Sbjct: 1 MLAKRIIPCLDVKSGRVVKGVNFVELRDAGDPVEIARRYDE------------------- 41 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +VAE + IP V GG++ +ED ++L+ GADK+S+N+ A+ +P L+ A + Sbjct: 42 -------QVAEQVFIPLTVGGGVRVVEDVRRLLNAGADKVSMNTAAVNNPQLVFEAASKV 94 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIVV ID A T + ++W ++V+ GAGEI+L M+ Sbjct: 95 GSQCIVVAIDAKQTAPG-----KWEVFTHGGRNNTGLDAIEWARKVESLGAGEILLTSMD 149 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG ++G+DL + V + +P+IASGG GT+EH E + D LAAS+FH Sbjct: 150 RDGTKSGFDLALTRAVSDAVRIPVIASGGVGTLEHLAEGVSEGRADAVLAASIFHFGQHT 209 Query: 241 IGELKAYLATQGVEIRI 257 + E K + +G+E+R+ Sbjct: 210 VREAKELMRARGIEVRL 226 >UniRef50_B3DY29 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DY29_METI4 Length = 248 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 13/250 (5%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 ++ +D+ GQVV+ Q + E D V A + +GAD L D+ + G Sbjct: 8 TMKMYAAIDLFKGQVVRLRQGKLEEMTVYGSDPVKTALFWQSQGADGLHIVDLEGAFSGT 67 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + ++A + IP GG++++E K L GA ++ I S + DP + L+++ Sbjct: 68 PRHLDLLEKIAYAVTIPIQFGGGLRTVEQVLKALEGGAQRVVIGSKLVTDPGFLQELSEK 127 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 G + IV +D N E + + + ++++ V+++GAG ++ + Sbjct: 128 IGPEKIVAALD----------TQNGEIQIEGWKKSSGYSLENFIKWVEQKGAGFLLYTNI 177 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG G D+ +KV E+ +P+ ASGG G + E + + GA+ ++ I Sbjct: 178 QTDGTLKGADVRGTQKVVEMSRLPVFASGGIGCTKDVEELLKLKGLYGAILGRSLYEGKI 237 Query: 240 NIGELKAYLA 249 ++ E+K Sbjct: 238 SLSEIKKNFK 247 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 5/102 (4%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY--DLEQLKKVREVCHVPLIASGGAGTMEH 215 + + Q +GA + ++++ +G +G L+ L+K+ +P+ GG T+E Sbjct: 39 DPVKTALFWQSQGADGL--HIVDLEGAFSGTPRHLDLLEKIAYAVTIPIQFGGGLRTVEQ 96 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 L+A + S + EL + + + + Sbjct: 97 VLKALE-GGAQRVVIGSKLVTDPGFLQELSEKIGPEKIVAAL 137 >UniRef50_B5YIB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_THEYD Length = 244 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 113/253 (44%), Gaps = 14/253 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IIP +D++DG+ V+ Q + + A R+ EGA+ L D+ + +G++ Sbjct: 1 MQIIPAIDLKDGKCVRLRQGKFSEVTVYYDNPEDAALRWQNEGAEVLHVVDLDGAKEGKI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ E V GGI+ +ED +LS G D++ + + A+ P + + RF Sbjct: 61 GNLPSIKKIREAFRGNIEVGGGIRRIEDIELLLSVGIDRVIVGTIAVQSPDFVKEVCKRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + IV G + + VT+ ++ ++Q G I+ ++ Sbjct: 121 PKKIIV-----------GIDAKDGLVAVKGWVEVTEIRAIELALKMQDYGIWGIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++E K + E VP+IASGG ++E + + G + + I+ Sbjct: 170 RDGMLTGPNIEATKALVESVKVPVIASGGVSSIEDIRKLAEIPQLWGVITGKAIYSGAID 229 Query: 241 IGELKAYLATQGV 253 + E + GV Sbjct: 230 LKEALRIIKGDGV 242 >UniRef50_P74106 Imidazole glycerol phosphate synthase subunit hisF n=67 Tax=Bacteria RepID=HIS6_SYNY3 Length = 261 Score = 202 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 114/255 (44%), Positives = 152/255 (59%), Gaps = 2/255 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 LAKRI+PCLDV G+VVKG+ F + + GD V LA+ Y E GADELVF DITA+ + R Sbjct: 3 LAKRILPCLDVNAGRVVKGINFVDLQDAGDPVELARAYNEAGADELVFLDITATHEQRDT 62 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V R AE + IP V GGI +LE +L GADK+S+NS A+ DP I+R +DRFG Sbjct: 63 IIDVVYRTAEEVFIPLTVGGGISTLEHIKNLLRAGADKVSVNSSAVRDPDFISRASDRFG 122 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QCIVV ID + + Y T + + W +EV KRGAGE+++ M+ Sbjct: 123 RQCIVVAIDARRRLDADNPGWDVYV--RGGRENTGLDAIAWAEEVAKRGAGELLVTSMDG 180 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG + GYDL + E +P+IASGGAG +H EAF + + AL AS+ H + I Sbjct: 181 DGTQAGYDLALTAAIAERVEIPVIASGGAGNCQHVYEAFTEGKAEAALLASLLHYGQLTI 240 Query: 242 GELKAYLATQGVEIR 256 GELK +L + + +R Sbjct: 241 GELKTFLEARQIPVR 255 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 1/100 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + ++ + + GA E+V + + ++ + + E +PL GG T+EH Sbjct: 32 DPVELARAYNEAGADELVFLDITATHEQRDTIIDVVYRTAEEVFIPLTVGGGISTLEHIK 91 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 R A D S + I Q + + I Sbjct: 92 NLLR-AGADKVSVNSSAVRDPDFISRASDRFGRQCIVVAI 130 >UniRef50_C9RKR3 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKR3_FIBSS Length = 263 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 103/256 (40%), Positives = 152/256 (59%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+I CLDVR+ +V KGV+F+ + IGD V + RY++EG DELVFYDITAS++ R Sbjct: 1 MLTKRLIVCLDVRNRKVTKGVKFKGNIDIGDPVEMGARYSDEGVDELVFYDITASAENRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + ++A+ + IPF V GGI++L+D + L GA+K+S+NS A+ P +I A F Sbjct: 61 CDMEMIRQIAKRVFIPFAVGGGIRNLDDMHEALLAGAEKVSVNSLAVLHPEIIAEGAKAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIV+G+D + + K + + L W + ++ G GEI LN ++ Sbjct: 121 GRQCIVLGMDAKFVGVSDKIPSGYEVFIRGGRQAMGIDALQWAKRAEELGVGEICLNSID 180 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGV+NGY+L + + VP+IASGGAGT H ++ FR D AL AS+ H Sbjct: 181 TDGVKNGYELTITDMIAKAVQVPVIASGGAGTPAHIVDLFRKTSADAALVASMVHFGDYT 240 Query: 241 IGELKAYLATQGVEIR 256 + +K + G+ +R Sbjct: 241 VPGIKGEMLAAGIPVR 256 >UniRef50_C0QRW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Persephonella marina EX-H1 RepID=HIS4_PERMH Length = 241 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 105/244 (43%), Gaps = 16/244 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D++DG+ V+ + D V +AK++ E+GA L D+ + +G+ + Sbjct: 7 VIPAVDIKDGKAVRLYKGDPEAVTVYGDDPVSVAKQWEEKGAKHLHIVDLDGAFEGKPKN 66 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V + + + IP GG++S E I+ G +++ I S A + R+ + Sbjct: 67 IDIVKDIVKTVSIPVEFGGGLRSFEAVKSIVETGVERVVIGSLAYQNRQEFERIVSAYPG 126 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + IV G + + T++ LD+ + + +N+D Sbjct: 127 KVIV-----------GIDAKDGKVAIKGWLEKTEYTPLDFARMFDDLDIWGFLYTDVNRD 175 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQIIN 240 G G ++E K + + P+IASGG G++E + + V G + ++ I Sbjct: 176 GAMVGPNIEGTKYLAQNLKHPVIASGGVGSVEDLKKLYDLKKYGVYGVVVGKALYEGKIK 235 Query: 241 IGEL 244 + +L Sbjct: 236 LEQL 239 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 9/94 (9%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + + ++ +++GA + + ++ +++ +K + + +P+ GG + E + Sbjct: 35 DPVSVAKQWEEKGAKHLHIVDLDGAFEGKPKNIDIVKDIVKTVSIPVEFGGGLRSFE-AV 93 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 ++ + V+ + S+ ++ + + + Sbjct: 94 KSIVETGVERVVIGSLAYQNRQEFERIVSAYPGK 127 >UniRef50_Q0IDQ9 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IDQ9_SYNS3 Length = 255 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 94/256 (36%), Positives = 144/256 (56%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M RIIP LD++ G ++KGVQ +GD + AKRY+E GADEL+F D+ AS R Sbjct: 1 MRNLRIIPRLDIKSGTLIKGVQMEGWRKVGDPILAAKRYSEYGADELLFMDVVASLYERN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V +V + IP V GGI+ ++D +LS GADK+S+N+ AL P LI ++DR+ Sbjct: 61 TLHEIVEQVCSNVFIPVTVGGGIRKIKDVETLLSRGADKVSVNTGALLKPELINEISDRY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q V+ ++ E + ++ + E ++WV+E + RGAGEIVL ++ Sbjct: 121 GSQATVLTVECLKCGEKSWEAL-----TDNGRNRSGREVIEWVKEAENRGAGEIVLTSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 QDG G+D++ + V + ++P+IASGG G H +E + DV GA A H + ++ Sbjct: 176 QDGRGYGFDIDLVDIVSQAVNIPIIASGGFGKPSHIVELIKSTDVSGAAIAQALHWEKVS 235 Query: 241 IGELKAYLATQGVEIR 256 E++ L V +R Sbjct: 236 FSEIRDSLRDNNVFLR 251 >UniRef50_Q12WC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=18 Tax=Euryarchaeota RepID=HIS4_METBU Length = 246 Score = 200 bits (510), Expect = 3e-50, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 126/257 (49%), Gaps = 17/257 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ +IP +D++ G+ V+ VQ + D V +A + +GA L D+ + +G Sbjct: 1 MSFEVIPAVDMKGGKCVQLVQGVPGSEMISLDDPVEVALDWVSQGARTLHLIDLDGAIEG 60 Query: 59 RVVDKSWVSRVAEVID---IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + + ++ E I V GGI+S EDAA +L G DK+ +++ AL DP LI + Sbjct: 61 NRTNAPIIKKIVEKCKPQGIYIQVGGGIRSFEDAATLLDIGIDKVILSTAALKDPELIKK 120 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 L+D FG + I V +D N E T+ ++ ++ + +++GAG I+ Sbjct: 121 LSDEFGSEHINVALD----------SKNGKISIEGWTKESEHTAVEMGSQFEEKGAGSIL 170 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++ +G+ NG + + +++ +P+IASGG T+E + ++ G + S + Sbjct: 171 FTNIDSEGLLNGVNPKPTEELVNAVTIPVIASGGVTTLEDIV-TLKNTGAAGVVVGSALY 229 Query: 236 KQIINIGELKAYLATQG 252 K+ + E ++ + Sbjct: 230 KKRFTLTEAINIISDKN 246 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 42/107 (39%), Gaps = 4/107 (3%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH---VPLIASGGA 210 ++ + ++ + +GA + L ++ N + +KK+ E C + + GG Sbjct: 29 ISLDDPVEVALDWVSQGARTLHLIDLDGAIEGNRTNAPIIKKIVEKCKPQGIYIQVGGGI 88 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + E D +D + ++ K I +L ++ + + + Sbjct: 89 RSFEDAATLL-DIGIDKVILSTAALKDPELIKKLSDEFGSEHINVAL 134 >UniRef50_Q18C71 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Firmicutes RepID=HIS4_CLOD6 Length = 240 Score = 200 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 109/248 (43%), Gaps = 15/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++D + V+ Q + + + +A ++ EGA+ + D+ + Sbjct: 1 MIIFPAIDIKDNKCVRLTQGEFDKVNVYYDNPLEVAYKWKNEGAEYIHIVDLNGARSEFG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + +A IDIP V GG++ E +++ G ++ + S A+ + L+ L + + Sbjct: 61 VNTKIIEDIANNIDIPIQVGGGVRDKEKVKSLINAGVTRVILGSIAIENLNLVEELVNEY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + +V + V+ ++L ++++K G IV ++ Sbjct: 121 KEKIVV-----------SIDAKDGKVAVRGWEVVSNVDSLTLCKQLEKIGVQTIVYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G + + +++ + + +IASGG ++E + ++ GA+ + + I+ Sbjct: 170 KDGMLQGPNFDIYERIAKETSLNVIASGGVTSIEDVKR-LKAMNLYGAIIGKALYDKKID 228 Query: 241 IGELKAYL 248 E + Sbjct: 229 FKEAQQLC 236 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 39/102 (38%), Gaps = 2/102 (1%) Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 L+ + + GA I + +N G + + ++ + +P+ GG E Sbjct: 29 YDNPLEVAYKWKNEGAEYIHIVDLNGARSEFGVNTKIIEDIANNIDIPIQVGGGVRDKEK 88 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 ++ +A V + S+ + + + EL + + + I Sbjct: 89 V-KSLINAGVTRVILGSIAIENLNLVEELVNEYK-EKIVVSI 128 >UniRef50_B2V6T1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Aquificales RepID=HIS4_SULSY Length = 239 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 112/248 (45%), Gaps = 16/248 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 L + IIP +D++ G+VV+ + + + + +AK + + GA+ + D+ + +G Sbjct: 3 LKEFIIPAIDIKGGKVVRLYKGEFDKVKVYNENPIDMAKYFEDAGAEHIHVVDLDGALEG 62 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + + ++IP GG++S E +L G +++ I S A +P ++ + Sbjct: 63 LPKNIKILESIVRSVNIPIEFGGGLRSFEAVKAVLDLGVERVVIGSLAYQNPEEFYKIVE 122 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 F + IV G + + T T+ L++ ++ + Sbjct: 123 SFPNKVIV-----------GIDAKDGKVAIKGWTEKTEVSPLEFAKKYDDLDIFGFLFTD 171 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR--DADVDGALAASVFHK 236 +++DG G ++E ++ + P+IASGG G++E ++ + + + G + ++ Sbjct: 172 VSRDGSMIGANVEATVELAKNLKHPVIASGGVGSLEDVIKLYEKREFGIFGVVVGKAIYE 231 Query: 237 QIINIGEL 244 I++ E+ Sbjct: 232 GKIDLKEI 239 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 38/96 (39%), Gaps = 1/96 (1%) Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 +D + + GA I + ++ +++ L+ + ++P+ GG + E Sbjct: 33 NENPIDMAKYFEDAGAEHIHVVDLDGALEGLPKNIKILESIVRSVNIPIEFGGGLRSFE- 91 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 ++A D V+ + S+ ++ ++ + Sbjct: 92 AVKAVLDLGVERVVIGSLAYQNPEEFYKIVESFPNK 127 >UniRef50_C8PKX5 Imidazole glycerol phosphate synthase subunit hisF n=3 Tax=Bacteria RepID=C8PKX5_9PROT Length = 306 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 123/304 (40%), Positives = 162/304 (53%), Gaps = 51/304 (16%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 AKRIIPCLDV+DG+VVKGV F GD V +AKRY EEGADEL F DITAS GR Sbjct: 5 AKRIIPCLDVKDGRVVKGVNFVGLVDAGDPVEIAKRYNEEGADELCFLDITASHLGRDTI 64 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V RVA + IP V GGI++++D +++L+ G DKIS+NS A+ +P LI A++FG Sbjct: 65 VDVVERVARELFIPLTVGGGIRTIDDISRLLNVGCDKISLNSAAIKNPNLIDEAANKFGS 124 Query: 123 QCIVVGIDTWYDAE---------------------------------------------- 136 QC+V+ ID ++ Sbjct: 125 QCVVIAIDAKRNSIEISRGDLYGEARNSNGDLHGGMRNPDTNLGSEARNFGEILRGAQDE 184 Query: 137 ---TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL 193 T + L W +E Q+RGAGEI+L M+ DGV+NG++L Sbjct: 185 ILTGNGELCGYSVFINGGRLDTGRDALAWAKEAQERGAGEILLTSMDCDGVKNGFELNLT 244 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + + +P+IASGGAG MEHF +AF A D LAAS+FH + I I LKAYL QG+ Sbjct: 245 R-IFSALDIPVIASGGAGKMEHFKDAF-LAGADACLAASIFHFREIEIKALKAYLQEQGI 302 Query: 254 EIRI 257 E+R+ Sbjct: 303 EVRL 306 >UniRef50_Q3AD49 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Clostridia RepID=HIS4_CARHZ Length = 243 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 101/253 (39%), Gaps = 16/253 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +VV+ Q V LA +Y E GA + D+ + G Sbjct: 1 MILIPAIDLMGKKVVRLTQGEKERKTEYPISPVELALKYQEAGARLIHVVDLDRAFTGES 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ + + + IP V GGI+ +E +++ G ++ + + A+ +P L+ + Sbjct: 61 ENFEVIAEIIKNVSIPVQVGGGIRDIESFRELIDLGVSRVIVGTIAVTNPELLEEMLTLD 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V G N + + + + LD +V++ G I+ + Sbjct: 121 RDKVAV-----------GIDAKNGWVAIKGWVESSNYRALDLAYKVKEMGVTTIIYTDIA 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR--DADVDGALAASVFHKQI 238 +DG G + + K+ + +IASGG +E + + G +A + Sbjct: 170 RDGSLTGPNFNETLKLAIDTGLKVIASGGISGLEDLRRWRELGENKIYGVIAGKAILEGK 229 Query: 239 INIGELKAYLATQ 251 I++ E L + Sbjct: 230 IDLKEGIRILEGE 242 >UniRef50_B0TY42 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_FRAP2 Length = 241 Score = 199 bits (506), Expect = 9e-50, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 102/247 (41%), Gaps = 11/247 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+ +G+ V+ + + +AK Y + GA+ + D+ + G+ Sbjct: 1 MNIFPAIDLINGKCVRLEKGDFNKTTTYELEPKDVAKAYQQAGAEFIHVVDLDGAKKGQT 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ E ++ V GG+K E K+L G D++ I S A+ D L + +++ Sbjct: 61 CQFETIQKIRENCNMTLQVGGGVKDFETIEKLLEIGVDRVVIGSLAVKDIALTKKFFEKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IV+ +D + + + + +Q G ++ ++ Sbjct: 121 GAEKIVLALDVFIKNGVPYIATHG------WQESSTTTLDEILQTYLGDGLEYVLCTDIS 174 Query: 181 QDGVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG+ G + E + + V +ASGG G++E E ++ + G + ++ Sbjct: 175 RDGMLQGPNFELYRIYSSIYPDVQFMASGGVGSLEDL-EILKEQNTYGVIIGKALYENKF 233 Query: 240 NIGELKA 246 + E Sbjct: 234 TLQEALE 240 Score = 53.3 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 1/101 (0%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 E D + Q+ GA I + ++ E ++K+RE C++ L GG E Sbjct: 30 LEPKDVAKAYQQAGAEFIHVVDLDGAKKGQTCQFETIQKIRENCNMTLQVGGGVKDFETI 89 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + VD + S+ K I + + + + + Sbjct: 90 EKLLE-IGVDRVVIGSLAVKDIALTKKFFEKYGAEKIVLAL 129 Score = 41.0 bits (95), Expect = 0.041, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 3/118 (2%) Query: 5 RIIPCLD--VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +I+ LD +++G + + + Y +G + ++ DI+ + + Sbjct: 124 KIVLALDVFIKNGVPYIATHGWQESSTTTLDEILQTYLGDGLEYVLCTDISRDGMLQGPN 183 Query: 63 KSWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + D+ F +GG+ SLED + + I + + + Sbjct: 184 FELYRIYSSIYPDVQFMASGGVGSLEDLEILKEQNTYGVIIGKALYENKFTLQEALEC 241 >UniRef50_D1CF74 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CF74_THET1 Length = 243 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 15/253 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +GQ+V+ Q D V +A+++ GA L D+ + G Sbjct: 1 MIVIPAIDILEGQLVRLTQGDYSRKKVYSYDPVVVARKWKAIGAQWLHVVDLDGARQGHP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + V V GG+++LED I+ GA +I + + A+ DP + + ++ Sbjct: 61 VNVDVIKSVIMEFGPQVQVGGGLRTLEDIQSIVELGASRIVLGTSAVKDPEFLREVCAKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + N + T+ + + L+ + V+ G G I+ + Sbjct: 121 PDMVVA-----------ALDTRNGVVAIDGWTKSSGLDVLEVAKLVEDAGVGYILFTAIE 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG G D+ ++++ VP+IASGG E E A V + ++ + Sbjct: 170 TDGTMTGPDIAAVQRLMSHVSVPVIASGGISEPEDLEE-LSKAGVYAVIVGKALYEGRLP 228 Query: 241 IGELKAYLATQGV 253 + Y A + Sbjct: 229 EEVITTYSAPKEY 241 >UniRef50_Q2P3J8 Imidazole glycerol phosphate synthase subunit hisF n=360 Tax=Bacteria RepID=HIS6_XANOM Length = 258 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 163/256 (63%), Positives = 197/256 (76%), Gaps = 1/256 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML++RIIPCLDVR+G+VVKGV+F +H +GDIV LA RY +GADELVFYDI AS +GR Sbjct: 1 MLSRRIIPCLDVRNGRVVKGVKFHDHIDMGDIVELALRYRAQGADELVFYDIGASPEGRS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 VD +WV RVA +IDIPFCVAGGI +E A +L GADKISINSPAL P LI+ LAD F Sbjct: 61 VDYTWVERVARLIDIPFCVAGGIGDVETARAVLHAGADKISINSPALGRPQLISELADAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 GVQC+VVGID+ + + G++ V +YTGD S+T+ TLDWV E Q+ GAGEIVLN M+ Sbjct: 121 GVQCVVVGIDSIRE-DDGQWRVRRYTGDPSKTQALPMRTLDWVAEAQRLGAGEIVLNCMD 179 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGVR GYD+ QL++VR +CHVPLIASGGAG M+HF + F ADVDGALAASVFH I Sbjct: 180 NDGVRRGYDIAQLRQVRALCHVPLIASGGAGEMQHFADVFDQADVDGALAASVFHSGAIP 239 Query: 241 IGELKAYLATQGVEIR 256 I ELK +L Q +E+R Sbjct: 240 IPELKQFLRAQQIEVR 255 >UniRef50_B8FP23 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_DESHD Length = 250 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 117/257 (45%), Gaps = 18/257 (7%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + R+ P +D+++G+ V+ +Q R V +A+++ E+GAD L D+ + G Sbjct: 1 MRMRLFPAIDLKEGKAVRLLQGRMEDATVYGEQPVEVARKFKEQGADSLHVVDLDGAFAG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + V+ + + ++ + + V GGI++LE ++L G +++ + + A+ +P L+ + Sbjct: 61 KPVNDAVILKLIQSSGLRVQVGGGIRTLERIEELLKLGVERVILGTVAVRNPELVEKAVQ 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 RF ++ G + + T+ + LD ++K G +V Sbjct: 121 RFEEAVVI-----------GIDAKDGLVAVQGWAEKTEIKALDLALRMKKVGVKHLVFTD 169 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVD--GALAASVF 234 +++DG+ G +++ ++ + + ++ASGG +E +A V GA+ Sbjct: 170 ISRDGMLQGPNIQSTVELARLSGLQVVASGGVSRLEDLRLLQEEANRGVSLEGAIVGKAL 229 Query: 235 HKQIINIGELKAYLATQ 251 + ++ E + + Sbjct: 230 YAGAFSLAEALRVVGQR 246 >UniRef50_B3QRR1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Chlorobiaceae RepID=HIS4_CHLT3 Length = 262 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 112/252 (44%), Gaps = 15/252 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D++ G+ V+ + + + + +A + ++ A + D+ A+ G+ Sbjct: 1 MLIIPAIDIKGGKCVRLTRGDFEQEKIYLDEPSDMAIIWRKQNAKLIHVVDLDAALTGKP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ + +DIP + GGI++ EDAA+ L G ++ I S A+ +P+L+++L +++ Sbjct: 61 ENFDKIKQIVDTLDIPIEIGGGIRTAEDAARYLDIGVYRVVIGSAAVKNPSLVSQLIEKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IVVGID + T +Q + + E++ RG I+ + Sbjct: 121 GPRKIVVGID----------AEDGIAKISGWTESSQKKDYELALEMKDRGVERIIYTDIT 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG G E K E + + ASGG + + VD + +++ Sbjct: 171 RDGTLEGVGYETTKAFAEKAQMRITASGGVFGKQDLSKLCKLEHLGVDSVIIGKALYEER 230 Query: 239 INIGELKAYLAT 250 +L Sbjct: 231 FPCQKLWHLFEE 242 Score = 64.9 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 1/98 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 E D +K+ A I + ++ + +++K++ + +P+ GG T E Sbjct: 31 EPSDMAIIWRKQNAKLIHVVDLDAALTGKPENFDKIKQIVDTLDIPIEIGGGIRTAEDAA 90 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 D V + S K + +L + + + Sbjct: 91 RYL-DIGVYRVVIGSAAVKNPSLVSQLIEKYGPRKIVV 127 >UniRef50_Q1R079 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=31 Tax=cellular organisms RepID=HIS4_CHRSD Length = 249 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 17/254 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++DGQ V+ Q R D V +A R+ E GA L D+ + +G+ Sbjct: 1 MLVIPAIDLKDGQCVRLKQGRMDDSTTYGDDPVAMAARWVETGARRLHLVDLNGAFEGKP 60 Query: 61 VDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V+ V+ +A D+P + GGI++ E L G + I + A+ +P + + R Sbjct: 61 VNAEAVTAIARAYPDLPIQIGGGIRTAETIEAYLEAGVSYVIIGTQAVKEPAFVGEMCRR 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 F IV G + Y + V+ + +D + G IV + Sbjct: 121 FPGHVIV-----------GLDARDGYVATDGWAEVSTLKAVDLAKRFADDGVSSIVYTDI 169 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR--DADVDGALAASVFHKQ 237 +DG+ G ++ ++ +P+IASGG + DA + GA+ ++ Sbjct: 170 ARDGMMQGVNIAATAELAREGGLPVIASGGVTHLGDIEALLEVADAGILGAITGRAIYEG 229 Query: 238 IINIGELKAYLATQ 251 +++ E + Q Sbjct: 230 KLDVAEAQRLCDAQ 243 >UniRef50_P62353 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Desulfovibrio RepID=HIS4_DESVH Length = 249 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 104/255 (40%), Gaps = 17/255 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQF---RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+ +G V+ + D V A+ + E+G L D+ + G+ Sbjct: 1 MIVFPAIDLMNGVCVRLRRGRADDETVFSSDPVATARHWQEQGGRWLHVVDLDGAFSGQP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + + +DIP + GGI+ A L G +++ I + AL +P L F Sbjct: 61 VNAPLIRSICDALDIPVQLGGGIRDAATAKAYLEAGVERLIIGTIALEEPDAYAALCAEF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V + + + + + + G I+ ++ Sbjct: 121 PGRIGV-----------SLDAEGGKLKTKGWVADSGLTVDEVLPRLLEAGTAFIIYTDID 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF---RDADVDGALAASVFHKQ 237 +DG++ G +L L+ + + VP+IA+GG T+E + R ++ GA++ ++ Sbjct: 170 RDGMQTGVNLPALEHLAKASTVPVIAAGGVATLEDVKALYPLSRTTNLQGAVSGRAIYEG 229 Query: 238 IINIGELKAYLATQG 252 +++ ++ Q Sbjct: 230 TLDLRTAMDWIRQQE 244 >UniRef50_A5INE6 Imidazole glycerol phosphate synthase subunit hisF n=7 Tax=cellular organisms RepID=HIS6_THEP1 Length = 254 Score = 196 bits (498), Expect = 8e-49, Method: Composition-based stats. Identities = 127/257 (49%), Positives = 161/257 (62%), Gaps = 7/257 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRII CLDV+DG+VVKG F N GD V L K Y+E G DELVF DITAS + R Sbjct: 1 MLAKRIIACLDVKDGRVVKGTNFENLRDSGDPVELGKFYSEIGIDELVFLDITASVEKRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V +VAE IDIPF V GGI E A++++ GADK+SIN+ A+ DP+LIT++A F Sbjct: 61 TMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVEDPSLITKIARTF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +VV ID K S + T DWV EV++RGAGEI+L ++ Sbjct: 121 GSQAVVVAID------AKKVDGEFVVFTYSGKKNTGILLRDWVVEVERRGAGEILLTSID 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + GYD E ++ VR + +P+IASGGAG MEHFLEAF A SVFH + I+ Sbjct: 175 RDGTKAGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA-SVFHFREID 233 Query: 241 IGELKAYLATQGVEIRI 257 + ELK YL GV +R+ Sbjct: 234 VRELKEYLKKHGVNVRL 250 >UniRef50_Q2SCV5 Imidazoleglycerol-phosphate synthase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCV5_HAHCH Length = 255 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 144/260 (55%), Gaps = 8/260 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR- 59 ML KRIIP L + G++VKG QF GD V A+ Y + ADELVF D+ A+ G Sbjct: 1 MLKKRIIPMLLLSQGRMVKGKQFSAFRDTGDPVSAARIYNAQFADELVFLDVDANRQGSD 60 Query: 60 -VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + +V+ +P V GG+ S+E +++ GADK+ I + AL +P LI + Sbjct: 61 FEQLLNLIDKVSSECFMPLSVGGGVNSVEQVRRLVQSGADKVVITTAALENPGLINDASA 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 FG QCIVVG+D + T+ E ++++++ +RGAGE ++N Sbjct: 121 IFGRQCIVVGLD------VKREDGAYRLYSHCGRHKTERELEEFIRDMTQRGAGEFIVNA 174 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +++DG+ GYDLE +K + V P++A+GGAGT H AF++A+ D + AS+FH Sbjct: 175 VDRDGMMQGYDLEMIKCAKAVTDRPVLAAGGAGTFAHLTAAFQEANADAVVCASIFHFGD 234 Query: 239 INIGELKAYLATQGVEIRIC 258 N +++L G+ +++ Sbjct: 235 NNPIRARSHLLNAGIPMKLI 254 >UniRef50_Q2JK82 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=91 Tax=Bacteria RepID=HIS4_SYNJB Length = 261 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 14/248 (5%) Query: 5 RIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +IP +D+ G+ V+ Q ++ D + A+ +A +GA L D+ + G V Sbjct: 9 EVIPAIDLLQGRAVRLYQGDYAQAEQVADDPIQQAEAWAAQGAPRLHVVDLDGAKSGDPV 68 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + R+ + IP V GGI+SLE A ++L G D++ + + A+ DP + + F Sbjct: 69 NLPIIERIVRSLAIPVQVGGGIRSLERARQLLDLGVDRVIVGTLAVEDPDTLEAMTQAFP 128 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + G T + VQ VQ +GA I+ +++ Sbjct: 129 GRV-----------WVGIDARQGQVATRGWLSTTPLRAPELVQRVQAQGAAGIIYTDISR 177 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG G +LEQL+++ V VP+IASGG G++ L + GA+ + I++ Sbjct: 178 DGTLAGPNLEQLRQILAVSQVPVIASGGIGSLTDLLALLSLPRLTGAILGKALYSGAISL 237 Query: 242 GELKAYLA 249 E + Sbjct: 238 QEALRAVG 245 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 36/94 (38%), Gaps = 1/94 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + + + +GA + + ++ + +L ++++ +P+ GG ++E Sbjct: 38 DPIQQAEAWAAQGAPRLHVVDLDGAKSGDPVNLPIIERIVRSLAIPVQVGGGIRSLERAR 97 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + D VD + ++ + + + + Sbjct: 98 QLL-DLGVDRVIVGTLAVEDPDTLEAMTQAFPGR 130 >UniRef50_A2C5V2 Imidazoleglycerol-phosphate synthase n=2 Tax=Prochlorococcus marinus RepID=A2C5V2_PROM3 Length = 500 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 88/255 (34%), Positives = 140/255 (54%), Gaps = 5/255 (1%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L+KRII LDV+ +++KGV+F +IGD + +A++YA+ G DEL++ D AS GR Sbjct: 15 LSKRIIARLDVKGNKIIKGVRFEGLRVIGDPLDMARKYAKAGIDELLYIDAVASLYGRNS 74 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + + IP GGI++LEDA +LS GADKI+IN+ AL P LI+ L++ G Sbjct: 75 LIEVLKSTSSEVFIPITAGGGIRNLEDAKLLLSNGADKIAINTAALECPQLISELSNTLG 134 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QC+VV I + + + ES + + + W++ VQ GAGEI+L ++Q Sbjct: 135 SQCVVVSIQARASSSSSWDAMK-----ESGREKSGIDVIKWIENVQLLGAGEILLTSVDQ 189 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG D ++KV + +PLI SGG +A ++ + + H Q N+ Sbjct: 190 DGTCIKPDEILIQKVLPILKLPLIVSGGFSDPNQVYQALTNSRISAVAIGAALHYQKTNV 249 Query: 242 GELKAYLATQGVEIR 256 ++K+ L+ + IR Sbjct: 250 SDIKSMLSFNNIAIR 264 Score = 60.6 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 1/100 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + LD ++ K G E++ +E LK +P+ A GG +E Sbjct: 44 DPLDMARKYAKAGIDELLYIDAVASLYGRNSLIEVLKSTSSEVFIPITAGGGIRNLEDA- 102 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + D + + I EL L +Q V + I Sbjct: 103 KLLLSNGADKIAINTAALECPQLISELSNTLGSQCVVVSI 142 >UniRef50_A3CNT1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Bacilli RepID=HIS4_STRSV Length = 242 Score = 195 bits (496), Expect = 1e-48, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 113/250 (45%), Gaps = 15/250 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ +I+P +D++DGQ V+ + + D++ A+ + E G + D+ + +G Sbjct: 1 MSMKILPAIDIKDGQAVRLFKGDFSQKTVVNPDVLEQARVFKEAGVTMIHVVDLEGALEG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R ++ ++++ + V GGI+SLE L+ G D++ I S A+ +P + + Sbjct: 61 RAANRDLIAQIKAETGLAIQVGGGIRSLEQIEDYLAVGIDRVIIGSMAVKNPEFVEAALE 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 RFG IV+GID E + + + ++K G V Sbjct: 121 RFGSGKIVIGID----------AKEGLVATEGWLETSNQDYISLALAMEKIGVRLFVYTD 170 Query: 179 MNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +++DG G +++ +K+ +IASGG + + E + + GA+ ++ Sbjct: 171 VDRDGTLTGPNIQHYQKLLASLKHAQVIASGGIQSADDLEEM-KKLGLAGAIVGKAYYSG 229 Query: 238 IINIGELKAY 247 I++ ++K Sbjct: 230 RISLEQIKEA 239 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 34/98 (34%), Gaps = 1/98 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + L+ + ++ G I + + + + + +++ + + GG ++E Sbjct: 33 DVLEQARVFKEAGVTMIHVVDLEGALEGRAANRDLIAQIKAETGLAIQVGGGIRSLEQIE 92 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 + +D + S+ K + + + I Sbjct: 93 DYL-AVGIDRVIIGSMAVKNPEFVEAALERFGSGKIVI 129 >UniRef50_Q2LTH2 Imidazole glycerol phosphate synthase, cyclase subunit n=3 Tax=Bacteria RepID=Q2LTH2_SYNAS Length = 254 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 99/257 (38%), Positives = 145/257 (56%), Gaps = 3/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M +I+PCLD+++G+VVKG+ F + GD V A Y EGADEL DI A+ + R Sbjct: 1 MKPIKIMPCLDMKEGRVVKGIHFVELKDAGDPVENAAFYQAEGADELAMLDIAATLENRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 WV++V+ V+ IP V GGI +LED +L GA KIS+NS A+ +P+L++ A +F Sbjct: 61 TRLEWVNKVSAVLTIPLTVGGGISTLEDIELVLQAGAAKISMNSAAVKNPSLVSEAAKKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I V ID + T + + W + Q+ GAG I+ M+ Sbjct: 121 GSEKITVAIDAR---RNSQMPSGFELVVSGGTLPVARDAVAWARTCQELGAGVILPTSMD 177 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG R GYD+E K + + +P++ASGGAG +E F EA + LAASVFH + ++ Sbjct: 178 GDGTRAGYDIEYTKAIADAVDLPVVASGGAGKLEDFYEAVQKGGASILLAASVFHYRTLS 237 Query: 241 IGELKAYLATQGVEIRI 257 I +K YLA +G+ + I Sbjct: 238 IRAVKQYLADRGLPVII 254 >UniRef50_A4XL21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Clostridia RepID=HIS4_CALS8 Length = 237 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 14/248 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ DG+ V+ Q D V AK + +EGA L D+ + G Sbjct: 1 MIVIPAIDIIDGKCVRLTQGDYSRVQEYNLDPVQQAKYFEKEGARYLHVVDLDGAKKGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + R+ E + GGI+ + L G D I + S +P + + RF Sbjct: 61 VNFEVIKRIKESTSLSVECGGGIRDKKTINDYLLAGIDYIILGSVIFKNPEFVEDVLKRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + + +D Y T+ + + ++K G +++ + Sbjct: 121 GNERFIASLDF----------EEGYVKLSGWQEATRISVEEGILHIKKLGFQKLIYTDIK 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG+ G++ E K +R + LI+SGG +M L+ +D VDG + + + Sbjct: 171 TDGMLKGHNFEAAKYIRSLFDGFLISSGGISSMNDVLK-LKDIGVDGVIIGKALYTGHVK 229 Query: 241 IGELKAYL 248 + E+ + Sbjct: 230 LNEIINLV 237 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 42/105 (40%), Gaps = 1/105 (0%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 GD SR + + + + +K GA + + ++ + + E +K+++E + + Sbjct: 20 GDYSRVQEYNLDPVQQAKYFEKEGARYLHVVDLDGAKKGSPVNFEVIKRIKESTSLSVEC 79 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 GG + + A +D + SV K + ++ + Sbjct: 80 GGGIRDKKTINDYL-LAGIDYIILGSVIFKNPEFVEDVLKRFGNE 123 >UniRef50_C5BV99 Imidazole glycerol phosphate synthase subunit hisF n=14 Tax=Bacteria RepID=HIS6_BEUC1 Length = 256 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 103/254 (40%), Positives = 148/254 (58%), Gaps = 1/254 (0%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 A R++PCLDV G+VVKGV F + GD V LA+RY +GADE+ F D++AS+ GR Sbjct: 4 ALRVVPCLDVDGGRVVKGVNFLDLRDAGDPVELARRYDADGADEITFLDVSASTQGRATT 63 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 VS AE + +P V GG++++ D +L GADK+ +N+ A+A P L+T +A +G Sbjct: 64 LEMVSATAEQVFVPLTVGGGVRAVADVEALLRAGADKVGVNTAAIARPELLTEIAQHYGN 123 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 Q +V+ +D + T + ++W E RGAGE++LN ++ D Sbjct: 124 QVLVLSVDARRCPDGVVTDSGFEVTTHGGRTGTGIDAVEWAAEATSRGAGEVLLNSIDAD 183 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G G+D+E ++ VR V PL+ASGGAGT+E F+ A R D LAASVFH + I Sbjct: 184 GTTAGFDVEMIEAVRAVVDTPLVASGGAGTVEDFVAAARAG-ADAVLAASVFHYGTLTIS 242 Query: 243 ELKAYLATQGVEIR 256 E+KA L G E+R Sbjct: 243 EVKAALRDAGFEVR 256 >UniRef50_A4G9I7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=209 Tax=Bacteria RepID=HIS4_HERAR Length = 265 Score = 194 bits (493), Expect = 3e-48, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 110/262 (41%), Gaps = 26/262 (9%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++DG V+ Q + D +A+ + E+GA L D+ + G+ Sbjct: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSEDPADMARHWLEQGARRLHLVDLNGAFAGKP 60 Query: 61 VDKSWVSRVAEVI----------DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 ++ V + + + +IP + GGI+ L+ + L G I I + A+ +P Sbjct: 61 KNEPAVKAILQAVREYAEKNGIEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + F Q IV G + + ++++ E +D ++ + G Sbjct: 121 GFLHDACSAFPGQIIV-----------GLDAKDGKVATDGWSKLSGHEVIDLAKKFEDYG 169 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE--AFRDADVDGA 228 I+ + +DG+ G ++E K+ + +P+IASGG ++ A ++ ++G Sbjct: 170 CESIIYTDIGRDGMMGGVNIEATVKLAQSMTIPVIASGGVHNIKDVEALCAVQEEGIEGV 229 Query: 229 LAASVFHKQIINIGELKAYLAT 250 + ++ +++ + Sbjct: 230 ICGRSIYEGTLDLRSAQDRADE 251 >UniRef50_A9A5X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Thaumarchaeota RepID=HIS4_NITMS Length = 236 Score = 193 bits (491), Expect = 5e-48, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 16/249 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IIP +D+ DGQVV+ + D V +AK++ + GAD L D+ A+ G Sbjct: 1 MKIIPAIDLMDGQVVRLYKGDPKQKTVYSDDPVSVAKKWQKAGADMLHIVDLDATI-GTG 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++++ + IP VAGG+++ E + +SF ++++ I + A D ++ R+A ++ Sbjct: 60 SNLDLIEKISKELSIPVEVAGGLRNEEIIDRAISF-SNRVVIGTMAFKDKEMLQRIAKKY 118 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 IV+ +D + + T+ LD + E G E +L ++ Sbjct: 119 DFSKIVISVDHI----------DGFIVTHGWQESTKTPLLDAINEFVSMGFTEFLLTNVS 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G DLE L+K V + +IASGG ++ + R + + ++ I+ Sbjct: 169 KDGTLEGPDLEYLEKACAVQNANVIASGGISNIDDVSDVQRK-NAFAVILGKALYENKIS 227 Query: 241 IGELKAYLA 249 I E K + Sbjct: 228 IEEAKQLVN 236 >UniRef50_Q8DMA5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=23 Tax=Bacteria RepID=HIS4_THEEB Length = 257 Score = 193 bits (490), Expect = 6e-48, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 105/252 (41%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ DG+ V+ VQ ++ D + +A + GA L D+ A+ G Sbjct: 1 MDVIPAIDLLDGKCVRLVQGNYDKVNVFHDDPLKVALYWQRLGAPRLHLVDLDAAKTGEP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ ++IP V GG++S + A + G ++ + + AL +P L+ LA + Sbjct: 61 RNYDLIGKIVASLEIPVQVGGGLRSRQAVADLFLQGVNRAILGTVALENPKLVASLAAEY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + G + Y ++ D Q + G V + Sbjct: 121 PGRI-----------WVGLDARDGYVATRGWLETSKILATDLAQNMAAMGVAGFVYTDIQ 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHKQI 238 +DG G ++ L+++ V + P+IASGG ++ L F + GA+ + + Sbjct: 170 RDGTLQGPNIPALRQLLAVTNRPVIASGGVSSLNDILSLFALTPHGLVGAIVGKALYTKA 229 Query: 239 INIGELKAYLAT 250 +++ E + Sbjct: 230 MDLREAVRAVGQ 241 >UniRef50_Q65EG2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=18 Tax=Bacillales RepID=HIS4_BACLD Length = 245 Score = 192 bits (489), Expect = 8e-48, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 108/256 (42%), Gaps = 16/256 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M + P +D+R+G+ V+ +Q + + +A R+AEEGA + D+ + + Sbjct: 1 MSEFTVYPAIDIRNGKCVRLIQGDYEKETIYGHSPLEMASRFAEEGASWIHLVDLDGARE 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G+ V+ V +A+ +D+ V GGI++ +D LS G +++ + S A+++ + ++ Sbjct: 61 GKKVNGGHVISIADKLDVKVQVGGGIRTEKDVYDYLSQGVERVILGSSAVSNTEFVKKML 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 +G + G + + E + + +E+ GA + Sbjct: 121 KAYGGHIAI-----------GLDARDGFVSTEGWLETSSVRAEELGRELANEGAEVFIFT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFH 235 + DG+ +G ++ ++ +IASGG ++ A V GA+ + Sbjct: 170 DIATDGMLSGPNINSTVELARATGKQVIASGGVSSLADLEALASRASEGVSGAIVGKALY 229 Query: 236 KQIINIGELKAYLATQ 251 + E +A + Sbjct: 230 TNQFTVAEALERVAAK 245 >UniRef50_B9E171 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=8 Tax=Bacteria RepID=HIS4_CLOK1 Length = 238 Score = 192 bits (489), Expect = 9e-48, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 114/247 (46%), Gaps = 15/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D++ G+ V+ + + D A ++ EGA L D+ + G Sbjct: 1 MIILPAIDLKGGKCVRLYKGDMNSQEVVARDPFETALKFKSEGAQYLHMVDLDGALKGSG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +S++ + +D+P V GGI+++E K + G ++ + + AL + L+ + + + Sbjct: 61 ENLDIISKIVKNVDVPIEVGGGIRNIETIDKFIKLGVSRVILGTAALKNKELVIKAVENY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V G + + T +++ +D+ +E++K G ++ ++ Sbjct: 121 DEKIAV-----------GIDAKDGVPAADGWTTLSKTNYIDFGKEMEKIGVQTLIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G +LEQL K++ +IASGG +E ++ + +V GA+ + + ++ Sbjct: 170 KDGTLEGTNLEQLLKLKNSVKCNVIASGGIKDIEDI-KSLKKENVYGAIVGKAIYAKTLS 228 Query: 241 IGELKAY 247 + + Sbjct: 229 LKKAIEI 235 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 1/114 (0%) Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVR 197 G V Y GD + V + + + + GA + + ++ +G +L+ + K+ Sbjct: 11 GGKCVRLYKGDMNSQEVVARDPFETALKFKSEGAQYLHMVDLDGALKGSGENLDIISKIV 70 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + VP+ GG +E + + V + + K + + + Sbjct: 71 KNVDVPIEVGGGIRNIETIDKFIK-LGVSRVILGTAALKNKELVIKAVENYDEK 123 >UniRef50_A3EUM5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Leptospirillum RepID=A3EUM5_9BACT Length = 247 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 106/249 (42%), Gaps = 15/249 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++ P +D+R+G+VV+ Q R + D V A ++ E G L D+ + +G Sbjct: 1 MQLYPAIDIRNGKVVRLTQGRFDQETVYGEDPVRTALQFRERGVQHLHVVDLDGAREGVP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V++S + + + V GG++S + A+ G ++ + + A+ DP + + ++ Sbjct: 61 VNRSLIREIVKAFRGFVQVGGGVRSKDIASFYYDAGVSRLILGTAAIKDPVFLGSMIEQH 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 V G ++ + + L+ + + + G V ++ Sbjct: 121 PDLFYV-----------GIDVKDESLAVNGWLDLDTQDPLEVMVRMSELGVRGFVYTDIH 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ +G + + + +R VP+IASGG + R+ VDGA+ + ++ Sbjct: 170 RDGLLSGPNFARYETLRRTVRVPVIASGGVRDISDIAR-LREIGVDGAIVGKAIYTGEMD 228 Query: 241 IGELKAYLA 249 + E L Sbjct: 229 LTEALRLLG 237 >UniRef50_C0W9Y4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9Y4_9FIRM Length = 245 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 55/255 (21%), Positives = 104/255 (40%), Gaps = 16/255 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M A + P +D+R G V+ + + D +A+R+AE GA + D+ + Sbjct: 1 MEAMNLYPAIDLRGGMCVRLEKGNFSKETVYSKDPGAMARRFAEAGARTIHVVDLDGALA 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G+ + S + + I V GGI++ E +LS G ++ + S A+ DP L+ R Sbjct: 61 GKSENLSAIKAILREGGISIEVGGGIRTYEQIEGLLSLGVSQVILGSAAIYDPQLVERAN 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 F + +V G N Y + + + + V G I+ Sbjct: 121 RDFPYKIVV-----------GIDAKNGYAAADGWEKDSNLTAEALARRVAAAGTERIIFT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE--AFRDADVDGALAASVFH 235 +++DG+ NG ++E + + C VP+ ASGG ++E A ++G + + Sbjct: 170 DISRDGMMNGSNIEATAALYQACGVPITASGGVSSLEDIRRLKARETDGIEGCIIGKALY 229 Query: 236 KQIINIGELKAYLAT 250 ++ + Sbjct: 230 AGAFSLSDALKIAGE 244 >UniRef50_D1U7I5 Histidine biosynthesis protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U7I5_9DELT Length = 289 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 79/238 (33%), Positives = 116/238 (48%), Gaps = 5/238 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 + RIIP LD++ +VKG+ F ++G A+ Y E GADEL F D AS R Sbjct: 1 MKFRIIPRLDIKGPNLVKGIHFEGLRVLGKPEDFARHYYENGADELFFQDAVASLYDRNS 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V R + I IP CV GG++S++D +L GADK++IN+ A+ P LI + FG Sbjct: 61 LHDIVKRTSSEIFIPLCVGGGLRSVDDIRAVLRAGADKVAINTEAIKRPELIREASVAFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 IVV I+ A + E T ++W + + GAGE+++ ++Q Sbjct: 121 SSTIVVSIEAIRRANGEWEAL-----VEYGRETTGVNAVEWAKRACELGAGELMITSIDQ 175 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +G GYD+E + + VP+IA GG G+ D ASV H + I Sbjct: 176 EGTGKGYDIELTRAIASAVSVPVIAGGGCGSPADAANVITQGRADAVSMASVLHYKTI 233 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 1/100 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + D+ + + GA E+ + +K+ +PL GG +++ Sbjct: 30 KPEDFARHYYENGADELFFQDAVASLYDRNSLHDIVKRTSSEIFIPLCVGGGLRSVDDIR 89 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 R A D + K+ I E + + + I Sbjct: 90 AVLR-AGADKVAINTEAIKRPELIREASVAFGSSTIVVSI 128 >UniRef50_Q4FNT6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=root RepID=HIS4_PELUB Length = 239 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 106/250 (42%), Gaps = 14/250 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D++D + V+ ++ E V A +Y + G L D+ + G Sbjct: 1 MKIFPAIDIKDKKCVRLIKGDFNNKTEYEISPVDQAGKYKDHGFKNLHIVDLDGALTGET 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + D+ V GG++S++ K ++ G +K+ + S A+ + + +F Sbjct: 61 VNLDIIKEIVHKFDLKIEVGGGVRSIDSIEKYINAGVEKVILGSAAIKNKNFLKEACQKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + G + Y + TLD+++EV GA ++ +N Sbjct: 121 PNKIAL-----------GLDAKDGYLSVSGWKENSNQLTLDFLKEVNDYGASRLIYTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + + E+ V V + P+I SGG +++ +A +++G + + I Sbjct: 170 RDGTKESPNFEETTNVANVSNCPVIISGGVSSIDDIKKAKGLKNIEGIIVGKAIYDGDIK 229 Query: 241 IGELKAYLAT 250 + EL L Sbjct: 230 LEELVKELDA 239 >UniRef50_D0LIZ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Nannocystineae RepID=D0LIZ1_HALO1 Length = 239 Score = 190 bits (484), Expect = 3e-47, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 91/251 (36%), Gaps = 15/251 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D+ G VV+ Q + E + + +R+A GA+ + D+ + G Sbjct: 1 MKIYPAIDLLGGNVVRLHQGKRSEALVYSNEPAEIVRRFASAGAERVHVVDLDGAFSGER 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ +A +P V GGI+ + + GA + + A+ +P Sbjct: 61 AHREALAEMAAASPVPLQVGGGIRDRAALEAVFATGAGFAVLGTAAVKNPAFAREACAAH 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 IV + E + + GA ++ + Sbjct: 121 PGCVIV-----------AVDARDGVVAIEGWVESAGITAEELGKRAADWGAAGLLYTDVM 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + G ++ + + +P+IASGG GT++ A A V + ++ Sbjct: 170 RDGAQVGPNIATTAALAQAVDIPVIASGGVGTLDDI-RALAAAGVPSVVVGRALYENKFT 228 Query: 241 IGELKAYLATQ 251 + E A + Sbjct: 229 LPEALAAARGE 239 >UniRef50_Q3SPZ7 Histidine biosynthesis n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SPZ7_NITWN Length = 258 Score = 189 bits (480), Expect = 9e-47, Method: Composition-based stats. Identities = 86/257 (33%), Positives = 138/257 (53%), Gaps = 7/257 (2%) Query: 1 MLAKRIIPCLDVRDGQVVK-GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 ML KR+IP +RDG++VK F N I G+ V AK Y + G DEL+ DI S+ R Sbjct: 1 MLKKRLIPKFLLRDGRLVKYTCFFDNERIAGNPVTTAKVYNDYGVDELIVLDIVPSAASR 60 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + + R++E I +PF V GG+K+ ED +L GADK+SINS A+ P + A Sbjct: 61 ARVEDIIGRMSEEIFMPFTVGGGVKTAEDVNALLRAGADKVSINSEAVRRPEFVREAART 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FG QCI V ID + + + ++W + GEI+++ + Sbjct: 121 FGDQCITVSIDYKRIG-----SHHASVYIDGGREHVALDPVEWALRCEDLHCGEILMSSI 175 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG GYDLE + + + VP+I SGG G+++H ++A A +S+F Sbjct: 176 DRDGTMQGYDLEMINTLTKRLGVPMIVSGGCGSLQHAIDALE-AGASAVAISSMFLFTDH 234 Query: 240 NIGELKAYLATQGVEIR 256 + +L+++LA++G+++R Sbjct: 235 SPIKLRSHLASRGLDVR 251 Score = 53.3 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 31/100 (31%), Gaps = 1/100 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + + G E+++ + + + ++ E +P GG T E Sbjct: 32 NPVTTAKVYNDYGVDELIVLDIVPSAASRARVEDIIGRMSEEIFMPFTVGGGVKTAEDVN 91 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 R A D S ++ + E Q + + I Sbjct: 92 ALLR-AGADKVSINSEAVRRPEFVREAARTFGDQCITVSI 130 >UniRef50_A7I1W6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=17 Tax=Epsilonproteobacteria RepID=HIS4_CAMHC Length = 236 Score = 189 bits (480), Expect = 9e-47, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 100/244 (40%), Gaps = 16/244 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+++G V+ + LA+++A+ GA L D+ + G Sbjct: 1 MEILPAIDLKNGFAVRLKKGEMNSAKIYSDKPWELAEKFADLGAKWLHIVDLDGAFAGEA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ + ++ V GGI+ E + G + + S AL +P + ++A ++ Sbjct: 61 KNAKTIEKIVKSTNLKIEVGGGIRDEERIKFYKNSGVSRFILGSAALKNPEFVKQMAKKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + G N + E V+ + + + G I+ ++ Sbjct: 121 KIA-------------VGIDAKNGFVATEGWAEVSNIKACELAKIYADAGVEAIICTDIS 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ +G +++ +++ + + IASGG + + + G + +++ I+ Sbjct: 168 KDGMLSGVNVKFSEEIAKSSGIKTIASGGVKDLSDIKALKQSGKIYGVIVGKAYYEGSID 227 Query: 241 IGEL 244 + E Sbjct: 228 LKEA 231 >UniRef50_A1W0U8 Putative imidazole glycerol phosphate synthase subunit hisF2 n=17 Tax=delta/epsilon subdivisions RepID=HIS62_CAMJJ Length = 248 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 92/258 (35%), Positives = 136/258 (52%), Gaps = 10/258 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML RIIPC+ +++GQ+VK ++F++ IG + + Y DEL+ DI AS G Sbjct: 1 MLKTRIIPCVLLKNGQLVKSIEFKDFRTIGHLTSTMRIYNARNVDELIILDIDASKSGE- 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +D + +A+ +P + GGIK+LED KIL+ GADKISINS AL D I++ A+RF Sbjct: 60 IDFESIEDLAKECFMPLTIGGGIKTLEDIQKILNLGADKISINSKALEDMDFISKAANRF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIV ID + ++ L+ E +K+GAGE++L ++ Sbjct: 120 GSQCIVCSIDVKRKGGQFCVYDRGNLLEK--------SPLELALEYEKKGAGELLLTSVD 171 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G GYDLE LK + +PLI +GG +EA + D A +FH Sbjct: 172 FEGRAKGYDLELLKIFQNKLKIPLIINGGLSNPSDGVEAL-NLGADALAGAYIFHFSKYT 230 Query: 241 IGELKAYLATQGVEIRIC 258 ++K LA QG +R+ Sbjct: 231 PKDVKEELARQGFAVRLL 248 >UniRef50_B2A6X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6X1_NATTJ Length = 246 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 111/257 (43%), Gaps = 19/257 (7%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ +IP +D+ +G+ V+ + + +A+ + E+GA L D+ + G Sbjct: 1 MSLELIPAIDLYEGECVRLTEGELGSKKVYSDNPSDMARHFQEQGASRLHLVDLEGAFQG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 V + + + ++A + IP V GGI+S+E ++++ G D++ + + A D + + Sbjct: 61 SVKNSTIIEKIANKVSIPVQVGGGIRSIEAIERLVNMGVDQVILGTKAYNDRDFLQSALE 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 F IV G E V+ +T D++ E+ + G ++L Sbjct: 121 LFHKNIIV-----------GVDIKGGKVATEGWVNVSDTKTYDYLSELTELGVPRVILTD 169 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR-----DADVDGALAASV 233 +++DG G +LE K++ + L+ SGG ++E + ++ G + Sbjct: 170 ISKDGKLQGPNLELFKELAIFTELDLVLSGGMSSLEDINRIQKLQNEIAHNLAGVILGKA 229 Query: 234 FHKQIINIGELKAYLAT 250 ++ I++ + Sbjct: 230 LYEGKIDLQGALETIRK 246 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 35/96 (36%), Gaps = 5/96 (5%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY--DLEQLKKVREVCHVPLIASGGAGTMEH 215 D + Q++GA + ++++ +G G + ++K+ +P+ GG ++E Sbjct: 33 NPSDMARHFQEQGASRL--HLVDLEGAFQGSVKNSTIIEKIANKVSIPVQVGGGIRSIEA 90 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + VD + + + + Sbjct: 91 IER-LVNMGVDQVILGTKAYNDRDFLQSALELFHKN 125 >UniRef50_A1KJ21 Imidazole glycerol phosphate synthase subunit hisF n=76 Tax=Bacteria RepID=HIS6_MYCBP Length = 267 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 109/256 (42%), Positives = 146/256 (57%), Gaps = 2/256 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 LA R+IPCLDV DG+VVKGV F N GD V LA Y EGADEL F D+TASS GR Sbjct: 13 LAVRVIPCLDVDDGRVVKGVNFENLRDAGDPVELAAVYDAEGADELTFLDVTASSSGRAT 72 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V R AE + IP V GG++++ D +L GADK+++N+ A+A L+ +A +FG Sbjct: 73 MLEVVRRTAEQVFIPLTVGGGVRTVADVDSLLRAGADKVAVNTAAIACLDLLADMARQFG 132 Query: 122 VQCIVVGIDTWYDAETGKYHVNQY-TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 QCIV+ +D + + R T + + W G GEI+LN M+ Sbjct: 133 SQCIVLSVDARTVPVGSAPTPSGWEVTTHGGRRGTGMDAVQWAARGADLGVGEILLNSMD 192 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG + G+DL L+ VR VP+IASGGAG +EHF A A SVFH + + Sbjct: 193 ADGTKAGFDLALLRAVRAAVTVPVIASGGAGAVEHFAPAVAAGADAVLAA-SVFHFRELT 251 Query: 241 IGELKAYLATQGVEIR 256 IG++KA LA +G+ +R Sbjct: 252 IGQVKAALAAEGITVR 267 >UniRef50_P72139 Putative imidazole glycerol phosphate synthase subunit hisF2 n=9 Tax=cellular organisms RepID=HIS62_PSEAE Length = 251 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 88/255 (34%), Positives = 141/255 (55%), Gaps = 5/255 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M+ +R+IPCL ++D +VK V+F+ + +GD + + + E+ DEL+ DI AS + Sbjct: 1 MVRRRVIPCLLLKDRGLVKTVKFKEPKYVGDPINAIRIFNEKEVDELILLDIDASRLNQE 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ VA +P C GGIK+LE A KI S G +K+SIN+ AL D +LI R+AD+F Sbjct: 61 PNYELIAEVAGECFMPICYGGGIKTLEHAEKIFSLGVEKVSINTAALMDLSLIRRIADKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +V ID G E+ TR + L+W Q +++ G GEI LN ++ Sbjct: 121 GSQSVVGSIDCRKGFWGGH-----SVFSENGTRDMKRSPLEWAQALEEAGVGEIFLNSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DGV+ G+D ++ + HVP+IA GGAG++ ++ F V A S+F + Sbjct: 176 RDGVQKGFDNALVENIASNVHVPVIACGGAGSIADLIDLFERTCVSAVAAGSLFVFHGKH 235 Query: 241 IGELKAYLATQGVEI 255 L +Y +++ Sbjct: 236 RAVLISYPDVNKLDV 250 >UniRef50_C9KKW7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKW7_9FIRM Length = 243 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 108/254 (42%), Gaps = 16/254 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+R G+ V+ ++ +AK++ +GA L D+ + GR Sbjct: 1 MIIFPAIDIRGGKCVRLLKGDFAKETVFSDKPEEMAKKWQTQGAQFLHLVDLDGALAGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + +DIP + GGI++LE ++L+ G ++ + S A+ DP L+ ++ Sbjct: 61 QNLATVKAILAAVDIPVELGGGIRTLESIDEVLALGVRRVILGSVAVRDPELVKTACAKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + +V G + + E +E++K G I+ ++ Sbjct: 121 GDRIVV-----------GIDAKDGIVAVDGWGVSGDVEATALAKEMKKAGVKTIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF--RDADVDGALAASVFHKQI 238 +DG G ++E K+ V ++ASGG ++ A ++G + + Sbjct: 170 RDGTLAGVNVEATAKLARESGVAVVASGGVKSIADIEALKPYEKAGIEGVIVGKSIYMGT 229 Query: 239 INIGELKAYLATQG 252 +++ E A +G Sbjct: 230 LDLAEAIEIAAKEG 243 >UniRef50_B8J249 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Desulfovibrionales RepID=HIS4_DESDA Length = 250 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 104/255 (40%), Gaps = 17/255 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+++G+ V+ Q R + V A+ + E GA L D+ + DG Sbjct: 1 MIIFPAVDIQNGKAVRLKQGRAHESTVFAESPVDAARAWEEAGARWLHVVDLDGAFDGAA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V + + IP + GGI+ + A L G ++ I + AL PTL + F Sbjct: 61 QSRRIVRDICAALAIPVQLGGGIRDMHTAEAYLEAGVSRLIIGTLALEQPTLFADMCRAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V T + + GA ++ + Sbjct: 121 PGRVGV-----------SLDAEGGRLKSRGWVEDTGMTVDTALPRLLDDGAAFVIYTDIE 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF---RDADVDGALAASVFHKQ 237 +DG++ G ++ L+ + + VP+IA+GG T+E + + + + GA++ ++ Sbjct: 170 RDGMQCGVNVAALEHLARLSTVPVIAAGGVATLEDIQKLYPLTLETSLMGAVSGRALYEG 229 Query: 238 IINIGELKAYLATQG 252 +++ E A++ + Sbjct: 230 TLDLKEANAWIDARK 244 >UniRef50_A6Q4V9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Proteobacteria RepID=HIS4_NITSB Length = 238 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 101/250 (40%), Gaps = 16/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D++DG+ V+ + + +AKR+ E G+ L D+ + G Sbjct: 1 MEILPAIDLKDGKAVRLTKGLMESAKIYSDEPWQVAKRFEEMGSRWLHLVDLNGAFAGEP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ + + GGI+ E K + G +++ + S A+ +P + +A ++ Sbjct: 61 KNLEQIKKIRANTSLKIELGGGIRDEETIRKYIDLGIERLILGSIAVKNPQFVKAMAAKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + ID + E + + D +E K G I+ + Sbjct: 121 PIAVGIDAID-------------GFVAVEGWAKTSTMRATDLAREFAKSGVQAIICTDVG 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G +++ + E + IASGG +E + V G + F++ ++ Sbjct: 168 KDGTLSGVNVDFTVSIAEASGIDTIASGGVRDIEDIKKLQATGTVAGVIVGKAFYEGTLD 227 Query: 241 IGELKAYLAT 250 + E + Sbjct: 228 LEEAFRLVQN 237 >UniRef50_Q18DL2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Halobacteriaceae RepID=HIS4_HALWD Length = 245 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 105/249 (42%), Gaps = 14/249 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN--HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +IP +D++DG VV+ VQ GD V AK++ E GA L D+ + +G + Sbjct: 8 FEVIPAVDMQDGDVVQLVQGERGTETRYGDPVVAAKQWVEAGAKTLHLVDLDGAFEGDRM 67 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + V + + +DIP + GGI++ DAA +L G +++ + + A+ +P L+ LA+ + Sbjct: 68 NATAVDAIIDAVDIPVQLGGGIRTANDAASLLDRGVNRVILGTAAVENPDLVAELAESYP 127 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + IV + T T + GA I+ ++ Sbjct: 128 GRIIV-----------SLDAADGEVVVSGWTESTGIDPAVAAARFADYGACGILFTDVDV 176 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +G G +V + +P+IASGG +++ + + + ++ + Sbjct: 177 EGKLAGIQSSVTARVIDAVDIPVIASGGVASLDDI-QTLHTTGAAATVVGTALYENKFTL 235 Query: 242 GELKAYLAT 250 + + Sbjct: 236 ADAMEVCES 244 >UniRef50_P62356 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Thermus RepID=HIS4_THET2 Length = 235 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 14/243 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 R+IP +D++ G+ V+ + GD V A R+ EEGA L D+ + G Sbjct: 1 MRLIPAVDLKSGKAVRLYEGDPARETPYGDPVEAALRFQEEGATLLHLVDLDRAL-GTGE 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 ++ V RVA + IPF +AGGI+SLE + LS GA + + + A+ DP L+ R+ + G Sbjct: 60 NREAVRRVAASLSIPFQLAGGIRSLEALQEALSLGASRAVVGTVAVKDPGLLARMLEAVG 119 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V +D LD ++ + G ++ + + Sbjct: 120 PDRLAVALD----------ARGLEVVVSGWQEAASASALDLLRAWAEMGVRTLLYTDVRR 169 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG G D E + +VR LI GG + E + VDGAL ++ I + Sbjct: 170 DGTLLGLDREVVARVRAAWPHELIVGGGIASPEDLH-LLQALGVDGALIGKALYEGRIRL 228 Query: 242 GEL 244 E Sbjct: 229 KEA 231 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 2/106 (1%) Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 + ++ Q+ GA + L +++ + G + E +++V +P +GG Sbjct: 24 RETPYGDPVEAALRFQEEGATLLHLVDLDRA-LGTGENREAVRRVAASLSIPFQLAGGIR 82 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 ++E EA A+ +V K + + + + + + Sbjct: 83 SLEALQEAL-SLGASRAVVGTVAVKDPGLLARMLEAVGPDRLAVAL 127 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 2/111 (1%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSR 68 LD R +VV V + L + +AE G L++ D+ +D+ V+R Sbjct: 126 ALDARGLEVV--VSGWQEAASASALDLLRAWAEMGVRTLLYTDVRRDGTLLGLDREVVAR 183 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V V GGI S ED + + G D I + R Sbjct: 184 VRAAWPHELIVGGGIASPEDLHLLQALGVDGALIGKALYEGRIRLKEAVWR 234 >UniRef50_B6BGE0 Imidazole glycerol phosphate synthase, cyclase subunit HisF n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGE0_9PROT Length = 254 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 84/257 (32%), Positives = 144/257 (56%), Gaps = 5/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M R+I +D+++ +KG+ +G+ +A RY E+G DE+V D AS R Sbjct: 1 MKKIRVIARIDIKNEHTIKGIHLEGLRKVGNPNEMALRYYEDGIDEIVLMDAVASLYDRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 K + + E I IP V GG+++L+D + L+ GADK++IN+ A+ +P+ IT + +F Sbjct: 61 SLKDVIVKACEDIFIPITVGGGLRNLQDIQEALNSGADKVAINTQAIREPSFITTASKQF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI+ I + E+ T + L W +EVQ+ GAGEI+L ++ Sbjct: 121 GSQCIISSIVAKKIDDGKWEAY-----IENGREPTGVDVLAWAKEVQELGAGEIMLTSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++G + G+DLE K V E+ ++P+I+SGGAG+ + + +D+D AS+ H ++ + Sbjct: 176 KEGTKKGFDLELNKAVAELVNIPVISSGGAGSTKDIVHLCESSDIDAVAIASILHYKLES 235 Query: 241 IGELKAYLATQGVEIRI 257 + E+K L +++RI Sbjct: 236 VSEIKKTLINNKIKVRI 252 >UniRef50_Q2S296 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Salinibacter ruber DSM 13855 RepID=HIS4_SALRD Length = 258 Score = 186 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 114/244 (46%), Gaps = 16/244 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+RDG+ V+ Q D V +AK + + A L D+ A+ + Sbjct: 4 VIPAIDIRDGRCVRLHQGDYDNETVYFEDPVKMAKLWRVQNAQTLHVVDLDAARGEGEHN 63 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + ++ + +DIP + GGI+S++ L G ++ + + A+ +P + R ++F Sbjct: 64 RDVIGKMCDALDIPIQLGGGIRSMDQIEAALDRGVYRVILGTAAVRNPDFVERAVEQFSA 123 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + +VV ID + + T + + + + +++++RG +V +++D Sbjct: 124 RRVVVSID----------ARDGEVRVQGWTEGSGLDAVAFAKDMEQRGVRRLVYTDISRD 173 Query: 183 GVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQII 239 G +G +++ + + R++ H + ASGG G + L+ + VD + + ++ Sbjct: 174 GTMDGPNIQAYRTLGRQLAHAKVTASGGVGEHDDLLDIQTLQPYGVDSVIVGTALYENRF 233 Query: 240 NIGE 243 + Sbjct: 234 PCQQ 237 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 10/102 (9%), Positives = 36/102 (35%), Gaps = 1/102 (0%) Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 + + + + + A + + ++ ++ + + K+ + +P+ GG +M+ Sbjct: 30 FEDPVKMAKLWRVQNAQTLHVVDLDAARGEGEHNRDVIGKMCDALDIPIQLGGGIRSMDQ 89 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 A V + + + + + + V + I Sbjct: 90 IEAALDR-GVYRVILGTAAVRNPDFVERAVEQFSARRVVVSI 130 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 6/121 (4%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 A+R++ +D RDG+V VQ D V AK + G LV+ DI+ + Sbjct: 123 ARRVVVSIDARDGEV--RVQGWTEGSGLDAVAFAKDMEQRGVRRLVYTDISRDGTMDGPN 180 Query: 63 KSWVSRV-AEVIDIPFCVAGGI---KSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + ++ +GG+ L D + +G D + + + + + Sbjct: 181 IQAYRTLGRQLAHAKVTASGGVGEHDDLLDIQTLQPYGVDSVIVGTALYENRFPCQQFWA 240 Query: 119 R 119 Sbjct: 241 W 241 >UniRef50_UPI0001C41EB6 phosphoribosylformimino-5- aminoimidazole carboxamide ribotide isomerase HisA n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41EB6 Length = 246 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 119/248 (47%), Gaps = 15/248 (6%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 I+P +D+R G+ V+ VQ + +I + +AK++ + GA+ + D+ + + Sbjct: 7 KMLIMPAVDIRGGKCVQLVQGKPGSEQVVIENPEKVAKKWEDAGAEVVHVIDLDGALESV 66 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + + ++ + +P + GGI+S+E A ++L+ D++ I + + +P +I++L++ Sbjct: 67 -TNIETIKKILNEVSVPIQLGGGIRSIEYAEELLNLDIDRLIIGTMGIKNPEIISKLSNE 125 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 +G + +++ +D + + + +E Q+ GAG I+ + Sbjct: 126 YGSERVMISLD----------SKDNKVVIKGWQEKIDKSASEISKEFQELGAGSILFTNV 175 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + +G+ G+ ++ + + + +P++ SGG +++ + + G + S +K I Sbjct: 176 DVEGLLGGFYVDPVIDLVDSVDIPVVYSGGVTSLDDLKQ-LQTTGAKGVVIGSALYKDKI 234 Query: 240 NIGELKAY 247 + + Y Sbjct: 235 KLEDALKY 242 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEH 215 ++ + GA V+++++ DG ++E +KK+ VP+ GG ++E+ Sbjct: 37 ENPEKVAKKWEDAGAE--VVHVIDLDGALESVTNIETIKKILNEVSVPIQLGGGIRSIEY 94 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 E + D+D + ++ K I +L ++ V I + Sbjct: 95 AEELL-NLDIDRLIIGTMGIKNPEIISKLSNEYGSERVMISL 135 >UniRef50_A0M284 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=35 Tax=cellular organisms RepID=HIS4_GRAFK Length = 241 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 107/252 (42%), Gaps = 15/252 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 RIIP +D+ +G+ V+ + D + +AK + G + L D+ + + Sbjct: 1 MRIIPAIDIIEGKCVRLSKGDYATKKIYNEDPLEVAKSFEAHGIEYLHLVDLDGAKSSHI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + +A + GG+K+ +D GA +I+ S A+ + + +F Sbjct: 61 VNHKILETIANKTSLKIDFGGGLKTDKDLQIAFESGASQITGGSIAVKNSDVFQNWIQKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I++G D ++ + E + ++Q +++G ++ ++ Sbjct: 121 GNKKIILGAD----------AKDRKIAVSGWLEDSNEEIIPFIQNYEEKGVKYVICTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG+ G E K++ ++ LIASGG + + + +G + ++ I Sbjct: 171 KDGMLEGPSFELYKEILSETKNINLIASGGISEFDELPK-LAELGCEGVIIGKAIYENRI 229 Query: 240 NIGELKAYLATQ 251 ++ + + Y+ Q Sbjct: 230 SLKQFENYILNQ 241 >UniRef50_Q4JW54 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=144 Tax=Bacteria RepID=HIS4_CORJK Length = 258 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 13/249 (5%) Query: 6 IIPCLDVRDGQVVKGVQF--RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 ++P +DV DGQ V+ VQ G + A + GA+ + D+ A+ GR + Sbjct: 12 LLPAVDVADGQAVRLVQGAAGTETSYGAPIEAALAWQNAGAEWIHLVDLDAAF-GRGSNF 70 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + V +D+ ++GGI+ E + LS G +++I + AL DP + R+G Sbjct: 71 ELLKEVTGQLDVNVELSGGIRDDESLERALSTGCRRVNIGTAALEDPEWCESVISRYG-- 128 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 D + ++ E + ++ + +G +V+ +++DG Sbjct: 129 ------DKVAIGLDTREVDGEWRLRGRGWTSDGGELWEVLERLDSQGVSRLVVTDVSRDG 182 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL--EAFRDADVDGALAASVFHKQIINI 241 + NG +++ L++V P++ASGG +++ A VD A+ + + Sbjct: 183 MLNGPNIDLLREVAAATDAPVVASGGISSLDDIRALAAVVHEGVDSAIVGKALYAGKFTL 242 Query: 242 GELKAYLAT 250 E Sbjct: 243 EEALEAAQG 251 >UniRef50_Q6KZD5 Histidine biosynthesis protein HisF n=1 Tax=Picrophilus torridus RepID=Q6KZD5_PICTO Length = 249 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 92/257 (35%), Positives = 147/257 (57%), Gaps = 8/257 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRII LDVR+G+VVKGV+F + + GD V A Y ++GADE+VF DI+A+ + R Sbjct: 1 MLAKRIIAALDVRNGRVVKGVRFMDIKDAGDPVENAVIYQDQGADEIVFLDISATDEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V V+ ++IPF V GGI+S++ A +L G DK+ +N+ A+ +P +I ++ Sbjct: 61 IMIDLVKSVSRELNIPFTVGGGIRSVKTALNLLREGCDKVFLNTYAIENPWIIKEISRET 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G +V+ +D Y+ Y + + + +W+ + GAGEI+L ++ Sbjct: 121 GSANLVIAVDAMYNN-------GYYVYKNAGRINSGLKLNEWLPMAEYLGAGEILLTSID 173 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG G+D + + + +P+IASGGAG EHFL+AF A S+ H +I Sbjct: 174 SDGTMKGFDNRLISEAASMIDIPVIASGGAGKPEHFLDAFMAGASGALAA-SILHFKINT 232 Query: 241 IGELKAYLATQGVEIRI 257 + ++K YL + GV +R+ Sbjct: 233 VNDIKRYLRSNGVNVRL 249 >UniRef50_B0K628 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Thermoanaerobacter RepID=HIS4_THEPX Length = 235 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 104/248 (41%), Gaps = 16/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ + + V+ + + V +AK + E GA + D+ + G + Sbjct: 1 MVLIPAIDIMEEKCVRLTKGDFNTKEVYYENPVDVAKMWEELGAKRIHVVDLDGAKQGHL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + ++ + V GGI++ E + S G + + S A+ D L+ + Sbjct: 61 VNGNIIEQIIKSCKAEIEVGGGIRNRETIDYLFSVGVKYVILGSAAIYDKDLLLYSLSNY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IV G N T+ + ++ +++++ G I+ ++ Sbjct: 121 GERTIV-----------GIDSKNGEVAVSGWLEKTKIKDMELAKKMKEIGVKTIIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG NG + + L+ + + V +IASGG ++E + ++ GA+ + IN Sbjct: 170 KDGTLNGPNFKALENILK-TGVQVIASGGISSIEDLKK-LKEMGAYGAIIGKALYIGKIN 227 Query: 241 IGELKAYL 248 + Sbjct: 228 FKSALEVI 235 >UniRef50_Q0AW40 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Clostridia RepID=HIS4_SYNWW Length = 244 Score = 186 bits (473), Expect = 6e-46, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 15/253 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++DGQ V+ VQ R +A+ + E+GA L D+ + G Sbjct: 1 MIIYPAIDLKDGQCVRLVQGRVENKTVYSDAPANVARSFQEQGASFLHIVDLDGAFQGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +A IDI F V GG++ L D K+L+ GA ++ I + A++ P I L D+F Sbjct: 61 QNLKAIEAIAAAIDISFQVGGGLRQLSDVEKLLALGASRVIIGTRAVSHPDFIANLLDKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IV+G+D E + +D+ +++ G + ++ Sbjct: 121 GPERIVLGLD----------AKEGMVAVEGWVSTSSVSAIDFGLQMKALGIQTAIYTDVS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG+ G +L +K++ + +IASGG ++++ + V GA+ + Sbjct: 171 RDGLLQGPNLAAIKEMASSTGLDIIASGGVSSLDNIRALKELENDGVSGAIIGKALYDGK 230 Query: 239 INIGELKAYLATQ 251 I + + ++ Sbjct: 231 IGLVDALREAESK 243 >UniRef50_C6UMW6 Putative imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UMW6_HODCD Length = 264 Score = 185 bits (470), Expect = 1e-45, Method: Composition-based stats. Identities = 99/255 (38%), Positives = 145/255 (56%), Gaps = 6/255 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 LA RIIPC+DV++G VVKG +F +G+ +A Y+ GADEL F D++ASS R + Sbjct: 5 LALRIIPCMDVKEGHVVKGSKFCGLVRVGEATLVANSYSVSGADELCFLDVSASSANRSI 64 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + +S+VAE IP V GG++ ++D +L GADK+SINS + P I R D+FG Sbjct: 65 LYATISQVAESCLIPLTVGGGVRRVKDVGDLLRAGADKVSINSAGVLSPEFIARCVDKFG 124 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QC+VV ID R T + L++ + + GAGEI+L +++ Sbjct: 125 SQCVVVSIDCKASDGAW------EVCTHGGARPTGVDALEYACQAAQFGAGEILLTSVDR 178 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DGV+ GYDL LK V + VP+IASGG G + HF A + L AS+ H+ + + Sbjct: 179 DGVKAGYDLALLKAVSSLVSVPVIASGGGGELSHFALALIEGGASAVLTASLLHRNELTV 238 Query: 242 GELKAYLATQGVEIR 256 +LK +L + G+ +R Sbjct: 239 SQLKFFLGSCGIVVR 253 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 5/108 (4%) Query: 31 DIVPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 D + A + A+ GA E++ D G D + + V+ ++ +P +GG L Sbjct: 155 DALEYACQAAQFGAGEILLTSVDRDGVKAG--YDLALLKAVSSLVSVPVIASGGGGELSH 212 Query: 89 -AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 A ++ GA + S + +++L G IVV D Sbjct: 213 FALALIEGGASAVLTASLLHRNELTVSQLKFFLGSCGIVVRDDYVRFG 260 >UniRef50_B1H0E7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=HIS4_UNCTG Length = 244 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+R G V+ Q D V +AK + +GA L D+ + G Sbjct: 1 MIIIPAVDIRQGNSVRLKQGNIDAETIYSKDPVFIAKLWKSKGAKRLHVVDLDGAFSGTN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++K+ + + +DIP V GGI++++ ++ GA + + A +P ++ + R+ Sbjct: 61 INKAIIKNICAAVDIPVEVGGGIRNMDKIKEVFDIGAAYAILGTVAFNNPEIVKKAITRY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I+V +D + +T E + V ++++ G EI+ ++ Sbjct: 121 GSEKIIVAVD----------AKDGKVAISGWKDITPIEASELVNKLKEIGVQEILYTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF--RDADVDGALAASVFHKQI 238 +DG+ G D LKK+ E + +IASGG T+++ ++ V A+ S + Sbjct: 171 RDGMFTGPDFAGLKKLSES-GMRIIASGGVKTIDNLVKLKKYEKDGVFAAIVGSALYTDD 229 Query: 239 INIGELKAYLAT 250 + + + Sbjct: 230 FKLEDAIEEIEG 241 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 36/101 (35%), Gaps = 1/101 (0%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + + + + +GA + + ++ + +K + +P+ GG M+ Sbjct: 30 KDPVFIAKLWKSKGAKRLHVVDLDGAFSGTNINKAIIKNICAAVDIPVEVGGGIRNMDKI 89 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 E F D A+ +V + + ++ + + + Sbjct: 90 KEVF-DIGAAYAILGTVAFNNPEIVKKAITRYGSEKIIVAV 129 >UniRef50_Q58927 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Euryarchaeota RepID=HIS4_METJA Length = 237 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 125/250 (50%), Gaps = 16/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D++D + V+ +Q ++ + + V +AK++ +EGA+ L D+ A+ G Sbjct: 1 MIIIPAVDLKDKKCVQLIQGDPNKKHLELNNPVEVAKKFVDEGAEYLHIIDLDAAF-GTG 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + + + +++P V GGI++LE A +++S G D++ + + A+ +P I L Sbjct: 60 NNRDVIKNIIKEVNVPVEVGGGIRNLEIAKELISLGVDRVIVGTKAILEPKFIDDLNKEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IV+ ++ + ++ ++E + + G I+ ++ Sbjct: 120 GKDKIVLAVEC----------KEGKVVIKGWKEKVDKTPIEVIKEFEDK-VGYILFTNVD 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G+ G +++ +K++ E +P+I SGG T+E +A ++ + G + S +K +I+ Sbjct: 169 VEGLLKGINVDIIKELIEKTDIPIIYSGGITTLEDI-KALKELGIYGVVIGSALYKGLID 227 Query: 241 IGELKAYLAT 250 + + + Sbjct: 228 LKKALEIVKN 237 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 36/96 (37%), Gaps = 2/96 (2%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 ++ ++ GA + + ++ G + + +K + + +VP+ GG +E Sbjct: 31 NPVEVAKKFVDEGAEYLHIIDLDAA-FGTGNNRDVIKNIIKEVNVPVEVGGGIRNLE-IA 88 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + VD + + + I +L + + Sbjct: 89 KELISLGVDRVIVGTKAILEPKFIDDLNKEIGKDKI 124 >UniRef50_B3E201 Histidine biosynthesis protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E201_GEOLS Length = 282 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 94/286 (32%), Positives = 141/286 (49%), Gaps = 33/286 (11%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M RIIP LD++ +VKG+ ++GD + A Y E GADEL++ DI AS R Sbjct: 1 MKPVRIIPRLDIKGPNLVKGIHLEGLRVLGDPIAFAHYYYENGADELIYSDIVASLYQRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + IP +AGG+++L D K L GADK+ IN+ A+ +P I + F Sbjct: 61 SILDLVTETSRSVFIPITLAGGLRTLNDIQKALRAGADKVCINTAAIENPDFIAQAVRVF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IVV ++ + + E+ + + E + WVQ V++ GAGEI+L +N Sbjct: 121 GSSTIVVAVEVVRNDDNSLIAY-----TENGRQSSGIEAVSWVQRVEELGAGEILLTSIN 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK---- 236 +G +GYD++ + +V +P+IA GGAG EH E F +DV A AS+FH Sbjct: 176 AEGTGDGYDMDLINRVVSAVSIPVIAHGGAGKPEHVREVFATSDVRAAAVASMFHYYAKK 235 Query: 237 ------------------------QIINIGELKAYLATQGVEIRIC 258 I+I ELK YL+ G+ R+ Sbjct: 236 LSADMNPVEGNLDFLRSGKSFSRVSEISIVELKQYLSKHGIVCRLV 281 >UniRef50_A8ESN1 Imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ESN1_ARCB4 Length = 256 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 140/260 (53%), Gaps = 14/260 (5%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+IPCL + G + K +F+ IGD + K + E+ DEL+F DI AS + R Sbjct: 2 MLQKRVIPCLLLHKGGLYKTEKFKKPTYIGDPINAIKIFNEKEVDELMFIDIDASVEDRE 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +A +P C GG+K++E KI + G +K+SI+S A+ +P LI A F Sbjct: 62 PNYKMIEDIASECFMPLCYGGGVKNIEQMKKIYALGVEKVSISSQAIINPNLIKEAARLF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q ++V ID D K + + T+ +D++++V+ GAGEIV+N + Sbjct: 122 GNQSVIVTIDIKKDFWGNKK-----IFINNGKKNTKLNPIDFIKQVESLGAGEIVINSCD 176 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF-HKQII 239 DG+ GYD+E LK+++E VP+IA GGAG + H + F + VD S+F ++ + Sbjct: 177 NDGIMKGYDIELLKEIKENTKVPIIALGGAGNLNHIKDVFESSKVDAVACGSMFVYQGPL 236 Query: 240 --------NIGELKAYLATQ 251 + +++ L + Sbjct: 237 KGVLISYPSYQKIQELLKNK 256 >UniRef50_D0MJ01 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJ01_RHOM4 Length = 266 Score = 184 bits (467), Expect = 3e-45, Method: Composition-based stats. Identities = 52/255 (20%), Positives = 108/255 (42%), Gaps = 17/255 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+R G+ V+ Q D V +A + + A L D+ A+ G+ + Sbjct: 4 VIPAIDIRGGRCVRLYQGSYERETVYFDDPVKMACLWRVQNARVLHVVDLDAAR-GQGHN 62 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + + +DIP V GG+++LED +L G ++ + + A+ +P L++ R+G Sbjct: 63 REVIGAICRTVDIPIQVGGGVRTLEDIEALLQVGVYRVVLGTAAVREPELVSEAIARYGC 122 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 +VVGID + + T T + ++ ++++RG V +++D Sbjct: 123 SRVVVGID----------ARDGEVRVQGWTEGTGVDAVELALDMERRGVRRFVYTDISRD 172 Query: 183 GVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQII 239 G G ++E + + + + ASGG + VD + ++ Sbjct: 173 GTLEGPNVEMYRTLGLHLKKARITASGGVSGYRDLMRLQELEPYRVDSVIIGRALYENRF 232 Query: 240 NIGELKAYLATQGVE 254 + + + V+ Sbjct: 233 PCQQFWCWHDKENVD 247 >UniRef50_Q47XB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=10 Tax=Alteromonadales RepID=HIS4_COLP3 Length = 261 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 14/250 (5%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSD 57 M+ IP +D+ G+VV+ Q + + YAE GA + F D+ + D Sbjct: 1 MM----IPAIDLIGGEVVRLYQGDYAQKTNYQYTVQDRQQAYAESGATVMHFVDLDGAKD 56 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + V + V GG++ +D ++L+ GAD++ I S A+ P L+T+ Sbjct: 57 STKRQLKTLKTVVNHPSMIIQVGGGVRCEDDVKQLLALGADRVVIGSLAIKQPELVTQWV 116 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 +G + IV+ +D DA+ K + D + + Q G ++ Sbjct: 117 KTYGCEKIVLALDIKIDAQGNK-----TLPTHGWIEDSGVNLEDLLAQYQDAGIKHVLCT 171 Query: 178 MMNQDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 +++DG G +++ +V + + ASGG G++ +A V G + + Sbjct: 172 DISKDGTLTGTNVDLYSEVCAKYPDIDWQASGGIGSLADI-KALIPTGVSGVILGRSLLE 230 Query: 237 QIINIGELKA 246 + E A Sbjct: 231 GKFTLEEAIA 240 >UniRef50_B2UX21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Firmicutes RepID=HIS4_CLOBA Length = 237 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 117/247 (47%), Gaps = 15/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+ DGQ V+ Q + DI +AK + GA+ + D+ + G Sbjct: 1 MIILPAIDIIDGQAVRLYQGDYNKKEVVANDIFNIAKEFECLGAEYIHLVDLDGAKSGYC 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V++ + ++A+ +D+P V GGI++ E K++ G ++ + + A+ D L+ + + + Sbjct: 61 VNEKIILKLAQTVDVPIEVGGGIRNFETIEKLIENGISRVILGTIAMEDEGLLKKAIECY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + V G N Y ++ LD+ + ++ G I++ ++ Sbjct: 121 GEKISV-----------GIDCKNGYVYGRGWLAESKLNYLDFAKNMESLGVKSIIVTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G + + L K++++ ++ + ASGG +E+ E ++ D+ GA+ + ++ Sbjct: 170 KDGTLEGPNFDMLMKLKKLVNIDITASGGIRDIENIKE-LKNIDIYGAITGKAIYSGNLS 228 Query: 241 IGELKAY 247 + E Sbjct: 229 LKEAIDI 235 >UniRef50_B0T799 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Caulobacter RepID=HIS4_CAUSK Length = 241 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 104/252 (41%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D++DGQ V+ + + A+R+ +G L D+ + +G+ Sbjct: 1 MILYPAIDLKDGQCVRLLHGDMEKATVFNNSPADQAERFVRDGFSWLHVVDLNGAIEGKS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + V + E I IP + GGI++LE + G ++ + + A+ DP L+ + A + Sbjct: 61 VNTAAVQSILESISIPVQLGGGIRTLEGVEAWIEAGVSRVILGTVAVHDPDLVRKAARLW 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q V + + T ++ + + + + G +++ ++ Sbjct: 121 PEQIAV-----------AVDVRDGKVAVDGWTGLSDLDAITLGKRFEDVGVAALIVTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV--DGALAASVFHKQI 238 +DG G ++E + ++ + +P+IASGG ++ V GA+ + Sbjct: 170 RDGALTGVNVEGVGELADAVSIPVIASGGVASVADIERLKARPGVEIAGAILGRSLYAGT 229 Query: 239 INIGELKAYLAT 250 I E A Sbjct: 230 IRPAEALTIAAA 241 >UniRef50_Q7UG70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodopirellula baltica RepID=HIS4_RHOBA Length = 253 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 18/254 (7%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 I P +D+R G+ V+ Q + D V AKR+ E GA L D+ A+ Sbjct: 11 RMEIWPAIDLRHGKPVRLRQGDYDQQTTFGDDPVEFAKRWQESGAKRLHLVDLDAARGDS 70 Query: 60 V-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 ++ V R+ E +P + GG++ +L+ G ++ + S AL DP + D Sbjct: 71 PDANRDAVQRIIEATGLPCQMGGGVRDEITIESLLNVGVTRLVVGSRALKDPDWFVEMCD 130 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR--GAGEIVL 176 ++ + + G + + + ++ +++ R IV Sbjct: 131 KYPGKLVA-----------GIDARDGKVATQGWLETSDVSAFEFATKLRSRTENIAAIVY 179 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + +DG+ G + E L ++ +PL+ASGG T + + + + A+ + Sbjct: 180 TDIAKDGMMQGPNFEGLAEMAAASDIPLVASGGVTTYDDIKQ-LVEMKMPAAIVGRSLYD 238 Query: 237 QIINIGELKAYLAT 250 ++ +GE+ Sbjct: 239 GVMELGEVVRLAGD 252 >UniRef50_C9RH20 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Methanocaldococcus RepID=C9RH20_METVM Length = 237 Score = 183 bits (465), Expect = 5e-45, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 119/247 (48%), Gaps = 16/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++D + V+ +Q + + D V +AK++ +GA+ L D+ A+ G Sbjct: 1 MIVIPAVDLKDKKCVQLIQGDPTKKHLELEDPVNVAKKWVHDGAEYLHIVDLDAAL-GCG 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ E ++IP V GGI+SL A +++ G DKI + + A+ DPT + L Sbjct: 60 NNVDVIEKIVEEVNIPVEVGGGIRSLTIAKRLMDIGVDKIVVGTKAITDPTFLNELLSEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I++ ++ + ++ ++ +K+ G I+ ++ Sbjct: 120 EREKIILAVECKQ----------GKVAIKGWKETINKNPIEIAKKYEKK-VGGILFTNVD 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G+ +G + ++ + + VP+I SGG T+E + ++ VDG + S +K IIN Sbjct: 169 VEGMLSGIKTDIIETLVKNVRVPIIYSGGITTLEDIKK-LKEIGVDGVIIGSALYKGIIN 227 Query: 241 IGELKAY 247 + + Sbjct: 228 LKDALKI 234 Score = 53.3 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 42/97 (43%), Gaps = 2/97 (2%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + ++ ++ GA + + ++ + G +++ ++K+ E ++P+ GG ++ Sbjct: 30 EDPVNVAKKWVHDGAEYLHIVDLDAA-LGCGNNVDVIEKIVEEVNIPVEVGGGIRSLT-I 87 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + D VD + + + EL + + + + Sbjct: 88 AKRLMDIGVDKIVVGTKAITDPTFLNELLSEIEREKI 124 >UniRef50_B8FJR2 Histidine biosynthesis protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJR2_DESAA Length = 262 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 95/265 (35%), Positives = 137/265 (51%), Gaps = 13/265 (4%) Query: 1 MLAKRIIPCLDVRD---GQ-----VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI 52 ML KR+IP L +R G+ +V V F IGD V AK Y + ADELVF D+ Sbjct: 1 MLKKRLIPKLQMRAASFGKTKRMVLVTTVGFGPSTEIGDPVSQAKIYQAQAADELVFLDL 60 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 AS + R +++ AE I +P V GG++S+ED ++L+ GADK+SIN+ A+ P L Sbjct: 61 DASIEHRDALTDIIAKAAEEIFMPITVGGGVRSVEDCRRLLNHGADKVSINTGAMEIPEL 120 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 I + +D FG QCIVV ID T + + W E Q RGAG Sbjct: 121 INQGSDMFGAQCIVVSIDYKKHPNGAY-----EVFTRGGKSSTGLDPVAWAVEAQHRGAG 175 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 EI+L +++DG R G +LE KV +P+I SGG G HF++ F A + Sbjct: 176 EILLTSIDRDGTRKGLNLELTAKVAGAVDIPVITSGGCGLASHFVDGFLVGKAHAVSAGT 235 Query: 233 VFHKQIINIGELKAYLATQGVEIRI 257 F + N + ++ ++ G+ IR+ Sbjct: 236 YFCFKDENPMQTRSRISNAGIPIRL 260 >UniRef50_B1CBX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBX0_9FIRM Length = 234 Score = 183 bits (464), Expect = 7e-45, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 107/245 (43%), Gaps = 15/245 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+RD + V+ Q + + +A+ + + G L D+ A+ G++ Sbjct: 1 MIIFPAIDIRDNKCVRLSQGDYDKQTVYFDNPFTVAEDFEKRGVKYLHIVDLDAALIGKL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ ++ V GGI+ E K + G D++SI + A+ D + +++++ Sbjct: 61 TNFDIIKKIITDTNMLIEVGGGIRGEEQIKKYVDIGVDRVSIGTKAVKDFAFLKEMSEKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + ++Y + + + D++ +++ IV+ + Sbjct: 121 PYKISLSLDV-----------KDEYVYIKGWSENSGILIWDYLDKIKDLPLTGIVVTDIK 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ +G E +K+++ ++ SGG +++ + ++ D G + ++ + Sbjct: 170 KDGMLSGPSFELYRKLKKATKHNIVVSGGVSSLDDINK-LKEDDTYGVIVGKALYENKFS 228 Query: 241 IGELK 245 + ++ Sbjct: 229 VEDII 233 Score = 41.4 bits (96), Expect = 0.030, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 2/114 (1%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 +I LDV+D V ++ + I + + +V DI Sbjct: 123 KISLSLDVKDEYVY--IKGWSENSGILIWDYLDKIKDLPLTGIVVTDIKKDGMLSGPSFE 180 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 ++ + V+GG+ SL+D K+ + + + + + Sbjct: 181 LYRKLKKATKHNIVVSGGVSSLDDINKLKEDDTYGVIVGKALYENKFSVEDIIC 234 >UniRef50_D2Q1W2 Bifunctional HisA/TrpF protein n=2 Tax=Actinomycetales RepID=D2Q1W2_9ACTO Length = 256 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 6 IIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 ++P +DV DGQ V+ VQ + GD + A + E GA+ + D+ A+ GR ++ Sbjct: 18 LLPAVDVADGQAVRLVQGEAGSETSYGDPLAAATAWQEAGAEWIHLVDLDAAF-GRGSNR 76 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 ++ V +D+ ++GGI+ E L+ GA +++I + AL DP R+ +G + Sbjct: 77 ELLADVTGRLDVQVELSGGIRDDESLEAALATGARRVNIGTAALEDPEWCDRVIQTYGDR 136 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + T + + ++ +++ G V+ + +DG Sbjct: 137 VAIGLDV------------RGRTLAARGWTKEGGDLYEVLERLERAGCERYVVTDVTKDG 184 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQIINI 241 + G +L+ + + P++ASGG +++ V+G + + + Sbjct: 185 MLQGPNLDLYRDLCARTAKPIVASGGVSSLDDLRALATLVPDGVEGVIVGKALYAGAFTL 244 Query: 242 GELKAYLAT 250 E Sbjct: 245 TEALELTRG 253 >UniRef50_D1B9F8 Histidine biosynthesis protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9F8_THEAS Length = 253 Score = 182 bits (463), Expect = 8e-45, Method: Composition-based stats. Identities = 89/256 (34%), Positives = 153/256 (59%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M+ KRIIP ++ ++VKG FR+H +GD V A +GA+E+V D+ A+ +GR+ Sbjct: 1 MMPKRIIPQFLLKGSRLVKGTSFRDHVDVGDPVSQAMIQDAQGAEEIVLVDVDATREGRL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 VD S +SR+ E +P V GG+ +++DA+++ GADK+ +N+ A+ +P++I LA+RF Sbjct: 61 VDTSLISRMVERCRLPIAVGGGVGNVDDASRLFVAGADKVIVNTAAVLNPSMIRPLAERF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +VV +D +++ G S + + ++ ++ GAGE ++ ++ Sbjct: 121 GAQSVVVSLDLKRNSKRGWVP-----VVRSGEEEVDLDFVYLLEALEANGAGEFIVTSVD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++G +G+DL+ LK VREV VPLIASGGAG H +E F D++G + + + Sbjct: 176 REGTLSGFDLDMLKVVREVVKVPLIASGGAGNYLHLVELFLSIDLEGVGIGKMLALRDYD 235 Query: 241 IGELKAYLATQGVEIR 256 + +KA+L +G+ +R Sbjct: 236 VVRIKAFLKGRGIPVR 251 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 1/111 (0%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 G R V + + +GA EIVL ++ D + ++ E C +P+ Sbjct: 20 GTSFRDHVDVGDPVSQAMIQDAQGAEEIVLVDVDATREGRLVDTSLISRMVERCRLPIAV 79 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 GG G ++ F A D + + I L Q V + + Sbjct: 80 GGGVGNVDDASRLFV-AGADKVIVNTAAVLNPSMIRPLAERFGAQSVVVSL 129 >UniRef50_UPI0001C3165B phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3165B Length = 246 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 106/251 (42%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+R G V+ Q D + A+ + E GA L D+ + DGR Sbjct: 1 MILYPAIDIRGGSAVRLRQGDFADETVYDADPLSAARAWVEGGARWLHVVDLDGARDGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + R+A + +P GG++S + GA+++ + + A AD + + + Sbjct: 61 ANLEHLRRIAGELGVPVEFGGGLRSRASVDAAIEAGAERVILGTAAFADVDFLDDVVAAY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + +V T+ E + +Q+RG ++V + + Sbjct: 121 GERVVVSVDV-----------RGGKVASAGWKEQTEMEAAAVIDHLQRRGVRKLVYSNIE 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG+ G DL+++++V E I SGG G+++H R +++G + +++ Sbjct: 170 RDGMLTGPDLDEVRRVAESVRGSFIYSGGIGSLDHLAALASLRQVNLNGVIVGKALYERK 229 Query: 239 INIGELKAYLA 249 +G+ L Sbjct: 230 FTVGDALTALK 240 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 4/102 (3%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + L + + GA + + ++ +LE L+++ VP+ GG + Sbjct: 31 DPLSAARAWVEGGARWLHVVDLDGARDGRPANLEHLRRIAGELGVPVEFGGGLRSRASVD 90 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQ---GVEIR 256 A A + + + + + ++ A + V++R Sbjct: 91 AAIE-AGAERVILGTAAFADVDFLDDVVAAYGERVVVSVDVR 131 >UniRef50_D0RQP1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQP1_9RICK Length = 238 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 106/247 (42%), Gaps = 14/247 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++DG+ V+ + + + AK + ++G + L D+ + Sbjct: 1 MIIYPAIDLQDGKCVRLTKGDFEQQTVYSRSPIEQAKAFEDKGFEFLHVVDLDRTIHKEK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + + + V GG+++ + +++ G + + + A+ DP L+ ++ ++ Sbjct: 61 SNLKTIKEIIQSTGLKVQVGGGLRTKDTVEEVIDLGVENAVMGTAAVNDPDLLIEISQKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V G ++ + T+ D+++ ++ I+ +N Sbjct: 121 KNKISV-----------GLDVRDKMIALKGWKDQTEISCFDFLETIKNLPLKSIIFTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG++ G +++ K+ E ++P+ ASGG +++ + G + + +I+ Sbjct: 170 KDGMKQGINIDDTLKMAESSNIPVTASGGVSSIDDIKLIKSKKKISGVVVGKAIYDGLID 229 Query: 241 IGELKAY 247 + EL + Sbjct: 230 LNELVKF 236 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 13/103 (12%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 ++ + + +G + + +++ + +L+ +K++ + + + GG T + Sbjct: 30 RSPIEQAKAFEDKGFEFLHVVDLDRTIHKEKSNLKTIKEIIQSTGLKVQVGGGLRTKDTV 89 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQ---GVEIR 256 E D V+ A+ + + E+ + G+++R Sbjct: 90 EEVI-DLGVENAVMGTAAVNDPDLLIEISQKYKNKISVGLDVR 131 >UniRef50_C2BYH3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2BYH3_LISGR Length = 240 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 113/246 (45%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D+++G+ V+ Q + D + A ++A GA L D+ + G+ Sbjct: 1 MQIFPAIDIKNGKCVRLYQGDFAKETMMNADPIDQAAKFAAAGATFLHIVDLDGAVSGKP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + R+ + + IP V GGI+++ L GA+++ I S AL+DP + ++ Sbjct: 61 TNIALIQRLQQQVKIPIQVGGGIRTMTQVDTYLRAGAERVIIGSAALSDPDFVKAAVTKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I+ G N + E +++ + + E+ K G I+ ++ Sbjct: 121 GDKIII-----------GIDAKNGFVATEGWLQLSDKKATTFAGEIAKLGVNTIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G + E+L+ +++ + +IASGG + + + GA+A ++ I Sbjct: 170 KDGTLAGPNFEELRAIQKSARIAVIASGGVSSKADLEQLAAE-GFYGAIAGKALYEGKIT 228 Query: 241 IGELKA 246 + ++ Sbjct: 229 MADVLE 234 >UniRef50_UPI00016BFDF6 putative 1-(5-phosphoribosyl)-5- n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFDF6 Length = 236 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 105/248 (42%), Gaps = 15/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 RI P +D+++GQ+V+ + + + D + + + +EGA L D+ + G + Sbjct: 1 MRIFPAIDIKNGQIVRLTEGKYDQVKVYSKDPEEVLEHFTKEGATALHIVDLDGAKSGTI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +++ + + + + GGI+ L+ G D++ + + A+ +P + + ++ Sbjct: 61 ENQNTIKTILKNRHFVTQLGGGIRDESTINHYLNMGVDRVILGTVAVENPKFVEEMVKKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q V G + ++ + +++ + + G I+ ++ Sbjct: 121 DQQIAV-----------GVDEKDGQVRANGWLVNSKVDAIEFCKMLTAMGVATIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G D+ +++ + V +IASGG ++ E + V G + ++ I Sbjct: 170 KDGMMAGCDMASYRQLCKDRKVNIIASGGVTSIAEIKE-LKRIGVAGVIVGKAIYEGKIA 228 Query: 241 IGELKAYL 248 + E A Sbjct: 229 LREATAIC 236 >UniRef50_C5BRY3 Imidazoleglycerol phosphate synthase, cyclase subunit n=2 Tax=Bacteria RepID=C5BRY3_TERTT Length = 259 Score = 180 bits (457), Expect = 4e-44, Method: Composition-based stats. Identities = 95/252 (37%), Positives = 138/252 (54%), Gaps = 5/252 (1%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 R I LDV+ Q++K + ++GD AKRY E+GADEL++ D+ AS GR K Sbjct: 10 RFIARLDVKGDQLIKAIHLEGLRVVGDPQIYAKRYYEQGADELLYIDLVASLYGRNKLKD 69 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 VSR A+ I IP V GGI+S+ED ++L+ GADK++IN+ A+A+P LI ++A RFG QC Sbjct: 70 IVSRTAQDIFIPLTVGGGIRSVEDVTELLAAGADKVAINTAAVANPALIEQVALRFGSQC 129 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 +V+ I+ E + + + + W +E +RGAGEI+L ++Q+G Sbjct: 130 MVLSIEAKRLGEDRW-----EVYTDCARESSGRDVIAWAKEAVERGAGEILLTSIDQEGT 184 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 R G+D V E VP+IASGG G EH + A H + I L Sbjct: 185 RKGFDTALTAAVAETVRVPVIASGGYGQPEHINAITHQGSANAIAFADALHFERETIASL 244 Query: 245 KAYLATQGVEIR 256 K+Y A G+ +R Sbjct: 245 KSYGAEAGLRVR 256 >UniRef50_A7FJH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=97 Tax=Gammaproteobacteria RepID=HIS4_YERP3 Length = 245 Score = 180 bits (456), Expect = 5e-44, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 107/249 (42%), Gaps = 10/249 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP LD+ +G+VV+ Q + +P + Y ++GA L D+T + D Sbjct: 2 IIPALDLIEGKVVRLHQGDYGQQRDYGNHPLPRLQDYQQQGAQVLHLVDLTGAKDPAARQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + +D+P V GGI++ +D +L GA ++ + S A+ P ++ + +R+G Sbjct: 62 IPLLRELLAGVDVPVQVGGGIRNEQDVVALLEAGAARVVVGSTAVKQPEMVQQWFERYGA 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + IV+ +D + K + + V++ G ++ +++D Sbjct: 122 EAIVLALDVRINEAGCK-----HVAISGWQENSDATLEQIVEQYLPYGLKHVLCTDISRD 176 Query: 183 GVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G +G ++E ++V + V ASGG G ++ R + V G + N+ Sbjct: 177 GTLSGSNVELYQEVCQRYPQVAFQASGGIGCLDDIAR-LRGSGVQGVIVGRALLDGKFNV 235 Query: 242 GELKAYLAT 250 E A Sbjct: 236 KEAIACWQN 244 >UniRef50_A3N3W4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=92 Tax=Proteobacteria RepID=HIS4_ACTP2 Length = 250 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 109/255 (42%), Gaps = 11/255 (4%) Query: 1 MLAK-RIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASS 56 M K IIP LD+ DG VV+ Q + + + Y +GA++L D+T + Sbjct: 1 MQKKSIIIPALDLIDGNVVRLHQGDYAKQTTYSDNPIEQFANYLAQGAEQLHLVDLTGAK 60 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + ++ + V GGI++ +D A +L+ GA+++ I S A+ D ++ Sbjct: 61 YPAKRQTALIGKIIAETNCQIQVGGGIRTEQDVADLLAVGANRVVIGSTAVKDRAMVKGW 120 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 +++G + V+ +D DA K + + +++ Q G ++ Sbjct: 121 FEKYGAEKFVLALDVNIDASGQK-----IIAISGWQEASGVSLEELIEDYQVVGLQHVLC 175 Query: 177 NMMNQDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +++DG G ++ +++ + + +SGG G+++ +A + V G + Sbjct: 176 TDISRDGTLAGSNVNLYREICAKYPKIHFQSSGGIGSLDDI-KALKGTGVSGVIVGRALL 234 Query: 236 KQIINIGELKAYLAT 250 + N+ E Sbjct: 235 EGKFNVAEAIECWQN 249 >UniRef50_B8IPH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=142 Tax=cellular organisms RepID=HIS4_METNO Length = 253 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 99/261 (37%), Gaps = 16/261 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M + P +D+++G+ V+ VQ + D A +AE+G L D+ + Sbjct: 1 MTRVILFPAIDLKEGRCVRLVQGDMAQAIVFSDDPAAQAASFAEQGFSWLHVVDLDGAFA 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G ++ + V + + IP + GGI+ + L+ G ++ I + A+ DP + A Sbjct: 61 GAPMNAAAVDAILAAVTIPVQLGGGIREMRTVEGWLAKGVSRVIIGTAAVRDPAFVREAA 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 F + V G + E + + + + + G ++ Sbjct: 121 RLFPGRIAV-----------GIDAKDGRVAVEGWAKTSTVTAEELGRRFEDAGVAALIYT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV--DGALAASVFH 235 + +DGV G ++ + + +P+IASGG ++E GA+ + Sbjct: 170 DIARDGVLKGLNIPMTLALAQAVSIPVIASGGLASIEDVHRILEPDCALLAGAITGRALY 229 Query: 236 KQIINIGELKAYLATQGVEIR 256 I+ E A + R Sbjct: 230 DGRIDPREALAAIRRAEEARR 250 >UniRef50_B9KXJ4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=HIS4_THERP Length = 244 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 15/244 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+R+G+ V+ + D + +A+R+A GA L D+ + G+ Sbjct: 1 MIVIPAIDLREGRCVRLFRGDFARATVYSDDPIEMAQRWASAGARWLHVVDLDGARLGQP 60 Query: 61 VDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V + RV + D+ V GG+++L+ ++L GA ++ I + AL P ++ R Sbjct: 61 VQHELIERVIRAVPDVAVQVGGGVRTLDAVERLLVGGAARVVIGTAALERPDMLREALAR 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FGV+ +VV +D + + V + V V G ++ + Sbjct: 121 FGVERVVVAVD----------SRDGWVATHGWETVQAIRVEEVVHRVVLLGVRRVLATDV 170 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG +LE + ++ V +IASGG G+ R V+ A+ ++ + Sbjct: 171 TRDGTLTRPNLELMGRLA-ALGVTVIASGGVGSRSDLEALARVPGVEAAIVGRALYEGRV 229 Query: 240 NIGE 243 Sbjct: 230 RFER 233 Score = 58.3 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 35/101 (34%), Gaps = 2/101 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC-HVPLIASGGAGTMEHF 216 + ++ Q GA + + ++ + E +++V V + GG T+ Sbjct: 31 DPIEMAQRWASAGARWLHVVDLDGARLGQPVQHELIERVIRAVPDVAVQVGGGVRTL-DA 89 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 +E + + ++ + E A + V + + Sbjct: 90 VERLLVGGAARVVIGTAALERPDMLREALARFGVERVVVAV 130 >UniRef50_C1TLB3 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLB3_9BACT Length = 239 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 18/252 (7%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M I P +D+ +VV+ + D V A +AE GA + D+ + Sbjct: 1 MKKIEIYPAIDLYSRKVVRLTGGDFEKIKEYGDDPVETALSFAEAGARWIHLIDLEGAEK 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G V + +VA +P GG+++ ED A LS GA ++ + S Sbjct: 61 GSPVHLKELEKVAASTGLPVQYGGGLRTEEDVALALSSGAKRVYLGSLL----------- 109 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 F + N T VTQ + + E+ + G ++ Sbjct: 110 --FKGSPRTLWKRFGNSIVPSVDVKNGTVALSGWTEVTQLPPEEAITELLRIGYSTFLVT 167 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +++DG +G DL+ +++++ ++A+GG + + + V GA+ ++ Sbjct: 168 SVSRDGTASGPDLKLYERLKK-TDGRILAAGGIRDKKDLAD-LAEIGVSGAVLGKSIYEG 225 Query: 238 IINIGELKAYLA 249 +++ E Sbjct: 226 TVDLREAVEEFG 237 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 3/118 (2%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW 65 I+P +DV++G V + G + ++ D Sbjct: 125 IVPSVDVKNGTV--ALSGWTEVTQLPPEEAITELLRIGYSTFLVTSVSRDGTASGPDLKL 182 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 R+ + D AGGI+ +D A + G + + + FG+ Sbjct: 183 YERLKK-TDGRILAAGGIRDKKDLADLAEIGVSGAVLGKSIYEGTVDLREAVEEFGIC 239 >UniRef50_C0QWR6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=12 Tax=Bacteria RepID=HIS4_BRAHW Length = 238 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 111/250 (44%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+++G+VV+ V+ D + + + E G+ L D+ +SDG Sbjct: 1 MYILPAIDLKNGEVVRLVEGNYDNKTTYFKDPLEVLDFFIESGSSYLHVVDLDGASDGET 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + +V + D+ V GGI++ + K L G + + + A+ + + +++ Sbjct: 61 INFKTIEKVIKKCDLFVEVGGGIRNEDTIKKYLDIGVKRTILGTAAVENIDFTNNMINKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 V ++ + + + +++++ ++ G I+ ++ Sbjct: 121 KEHIAV-----------SIDSRDRMIAVKGWKEINKQDSVEFCMKLDSMGIDTIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G +L+ K++RE +IASGG + ++ RD ++GA+ ++ I+ Sbjct: 170 KDGKLSGTNLDIYKELREKISCNIIASGGVTFEDEIIK-LRDMKINGAIVGKAIYEGKID 228 Query: 241 IGELKAYLAT 250 + ++ Sbjct: 229 LKKIIEIAKQ 238 >UniRef50_A6T0B3 Imidazoleglycerol phosphate synthase n=4 Tax=Proteobacteria RepID=A6T0B3_JANMA Length = 253 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 75/247 (30%), Positives = 130/247 (52%), Gaps = 5/247 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLA R++PCL + G +VK VQF+ IGD V + + ++ DEL+ DITA+++ R Sbjct: 1 MLAIRVMPCLLMDQGALVKTVQFKKPTYIGDPVNAVRIFNQKEVDELLLIDITATTEKRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +D + ++ +P C GG+ +L D ++ G +KIS+++ A+ +P L+ A F Sbjct: 61 IDFETLEKLVTECFMPICYGGGVDNLVDMRRLYHLGIEKISLSAAAITNPELVREAAAEF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q IVV +D + T+ ++ +E+++ GAGEI+L ++ Sbjct: 121 GNQAIVVTLDVKKNLFG-----KHTVRTHQGKTDTKRSPVEVAREMEQAGAGEILLYSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G+DL+ ++ V +P+IA GGAG + H A +A S+ Q + Sbjct: 176 KDGTWSGFDLDLIQNVTRAVGIPVIACGGAGELAHLRSAVNEAGASAVAIGSMAVFQAKD 235 Query: 241 IGELKAY 247 +G L + Sbjct: 236 LGVLIKF 242 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + ++ V+ ++ E++L + + G D E L+K+ C +P+ GG + Sbjct: 31 DPVNAVRIFNQKEVDELLLIDITATTEKRGIDFETLEKLVTECFMPICYGGGVDNLVDMR 90 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 ++ ++ + E A Q + + + Sbjct: 91 R-LYHLGIEKISLSAAAITNPELVREAAAEFGNQAIVVTL 129 >UniRef50_A6C5Q1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Planctomycetaceae RepID=A6C5Q1_9PLAN Length = 246 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 103/257 (40%), Gaps = 21/257 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+R G+ V+ Q + D +A+R+A+ GA L D+ + G+ Sbjct: 1 MEILPAIDIRGGKCVRLRQGDYGQETVFGDDPTEMARRWADGGAQRLHLVDLDGAKAGQP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADR 119 V+ V ++ E + +P + GGI+ +L G D++ + + AL DP ++ R Sbjct: 61 VNHEVVRKIVEAVSVPCQMGGGIRDEASIQLMLDEVGIDRVIVGTQALKDPQWFKQMVQR 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 + + + G + E V++ +D +E ++ + Sbjct: 121 YPNRLAL-----------GLDARDSKVATEGWLDVSETSAIDLAKEYVGVELAAVIYTNI 169 Query: 180 NQDGVRNGYDLEQLKKVREV--CHVPLIASGGAGTMEHFLEAFR----DADVDGALAASV 233 DG+ G D ++ + + +P+IASGG T++ + GA+ Sbjct: 170 ANDGMMQGVDEGTIQDMIALAELGLPVIASGGVTTLKDVSRLAEVSRTQPKLVGAIIGRA 229 Query: 234 FHKQIINIGELKAYLAT 250 ++ I + + Sbjct: 230 LYEGTIEVPAAIEAAGS 246 >UniRef50_C7PAV4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=8 Tax=Bacteria RepID=C7PAV4_CHIPD Length = 389 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 15/248 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+ DG+ V+ Q + +AK + G L D+ + G VV+ Sbjct: 148 VIPAIDIIDGKCVRLTQGDYAQKKVYNEHPLEVAKAFESIGIRRLHLVDLDGAKKGAVVN 207 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + +A ++ GGIK+ +D + GA +I S A+ DP L + ++G Sbjct: 208 WKVLEAIAGKTNLVIDFGGGIKTEDDLRIVYENGAALATIGSIAVKDPALFSGWVKKYGA 267 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 I +G D + T+ D+++E K+G I + +D Sbjct: 268 DKIFLGADVKEE----------KIAVGGWLETTELSVFDFLEENVKQGVQHIFCTDIAKD 317 Query: 183 GVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G+ G + +K+ + + +ASGG TM A +A G + +++ I++ Sbjct: 318 GLLQGPSVALYEKILQRFPQIDFVASGGVSTMADVH-ALAEAGCSGVIVGKAIYEERISM 376 Query: 242 GELKAYLA 249 EL ++ Sbjct: 377 KELADFIK 384 >UniRef50_B0R4B2 Imidazole glycerol phosphate synthase subunit hisF n=24 Tax=cellular organisms RepID=HIS6_HALS3 Length = 273 Score = 176 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 107/268 (39%), Positives = 142/268 (52%), Gaps = 14/268 (5%) Query: 2 LAKRIIPCLDVR---DGQ--VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS 56 L KR+IPC+DV DG+ V GV F GD V +AKRY E GADE VF DITAS+ Sbjct: 3 LTKRVIPCIDVDLDDDGEPAVYTGVNFEELAYTGDPVEMAKRYNEAGADEFVFLDITASA 62 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +GR VS VA+ + IP V GGI+ +D + L GADK+SINS A+ADP+L+ R Sbjct: 63 EGRETMLDTVSAVADEVFIPLTVGGGIRDTDDIRETLRAGADKVSINSGAIADPSLVDRG 122 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYH--------VNQYTGDESRTRVTQWETLDWVQEVQK 168 A FG QCIV+ +D + H T + ++WVQE Q+ Sbjct: 123 AKAFGSQCIVISVDARRRFDEQGQHYTQVDGESCWFECTVHGGREGTGMDAIEWVQEAQR 182 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 RGAGE+ +N ++ DG ++GYD+ V + P+IAS G G +A+ Sbjct: 183 RGAGELFVNSIDADGTQDGYDVPLTAAVCDAVSTPVIASSGCGAPGDMADAYDAGADAAL 242 Query: 229 LAASVFHKQIINIGELKAYLATQGVEIR 256 A S+FH +I E K LA G IR Sbjct: 243 AA-SIFHFDEYSIAETKETLADAGYPIR 269 >UniRef50_B1YL10 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YL10_EXIS2 Length = 234 Score = 176 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 107/247 (43%), Gaps = 15/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++ P +D+ GQ V+ Q + GD + +A+R+ E+GA + D+ + G + Sbjct: 1 MQLYPAIDLMSGQAVRLKQGDFQQQTFFGDALTIARRFKEDGATAIHLIDLDGAKAGEPL 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 S ++ + + + GG++++E + G D+I I + AL D L+ ++ +R G Sbjct: 61 HLSLIADIKKETGLFVEAGGGVRNIETVEAYVGAGIDRILIGTVALEDEALLEQMIERAG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V + + W ++ + ++G + +++ Sbjct: 121 DKLAV-----------ALDAKDGIVQTRGWLEASDWTLERAIEHLIQKGIKTFLYTDISR 169 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG+ G D++ L ++ V LIASGG T+E ++ +DGA+ +++ Sbjct: 170 DGMMQGPDVDGLDLLKRD-GVELIASGGVTTVEDVAR-LKEIGMDGAVIGRALLDGSLSL 227 Query: 242 GELKAYL 248 E+ Sbjct: 228 KEVLRVC 234 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 1/94 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + L + ++ GA I L ++ L + +++ + + A GG +E Sbjct: 30 DALTIARRFKEDGATAIHLIDLDGAKAGEPLHLSLIADIKKETGLFVEAGGGVRNIETV- 88 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 EA+ A +D L +V + + ++ + Sbjct: 89 EAYVGAGIDRILIGTVALEDEALLEQMIERAGDK 122 >UniRef50_Q7N8D1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2 n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=HIS42_PHOLL Length = 258 Score = 176 bits (446), Expect = 8e-43, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 20/256 (7%) Query: 3 AKRIIPCLDVRDGQV------VKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDIT 53 I P +D+ DG ++ + + +G +A + GA + D+ Sbjct: 6 TFEIFPSVDIVDGIAMTSNSAIRLTRGESSTLRRPLGTPAEVALAWQNAGAKWIHVVDLD 65 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A+ GR + ++ V +DI V GGI+ K+L+ G ++++ + AL +P Sbjct: 66 AA-SGRGSNSHLIADVLAAVDINVQVCGGIRDETILRKVLATGCQRVNLGTAALENPDWC 124 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + +G D A K Y V++ D ++ + K+G Sbjct: 125 AQAIAEYG--------DKIAIALDVKSTSEGYQLATHGWNVSKGNLWDLLERLDKQGCQR 176 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAA 231 V+ + + G+ + + L++V P+IA GG +++ V+GA+ Sbjct: 177 YVVTDVERGGMMSSPNFTLLQEVCAKTSSPVIAGGGVSSLDDLRALADLSTIGVEGAILG 236 Query: 232 SVFHKQIINIGELKAY 247 H + + + A Sbjct: 237 QALHIGKVPLEDALAA 252 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 23/94 (24%), Gaps = 2/94 (2%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + Q GA I + ++ G + + V + + GG E L Sbjct: 43 TPAEVALAWQNAGAKWIHVVDLDAA-SGRGSNSHLIADVLAAVDINVQVCGGIRD-ETIL 100 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + + + A + Sbjct: 101 RKVLATGCQRVNLGTAALENPDWCAQAIAEYGDK 134 >UniRef50_A7H5V3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=16 Tax=Campylobacter RepID=HIS4_CAMJD Length = 244 Score = 175 bits (445), Expect = 9e-43, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 13/251 (5%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +IIP LD+ DG+VV+ V+ + + + K Y + GA EL D+T + D Sbjct: 3 QIIPALDLIDGEVVRLVKGDYKQKKVYKYNPLKKFKEYEKAGAKELHLVDLTGAKDPSKR 62 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + ++A+ + + V GGI+S E+ +L G ++ I S A+ D TL + +FG Sbjct: 63 QLVLIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKKFG 122 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + IV+ +DT + + + + ++ + +G I+ +++ Sbjct: 123 SEAIVLALDT-------ILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISK 175 Query: 182 DGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG G ++ K + E + + ASGG +++ G + + + Sbjct: 176 DGTMQGVNVRLYKLIHEIFPKICIQASGGVASLKDLENLKGI--CSGVIVGKALLDGVFS 233 Query: 241 IGELKAYLATQ 251 + E L Sbjct: 234 VEEGIRCLQNA 244 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 1/101 (0%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + L +E +K GA E+ L + + L ++K+ + V L GG + E Sbjct: 31 YNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQLVLIEKLAKEVSVNLQVGGGIRSKEEV 90 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D V + S+ K E+ ++ + + + Sbjct: 91 KALL-DCGVKRVVIGSMAIKDATLCLEILKKFGSEAIVLAL 130 >UniRef50_A6LDI6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=24 Tax=Bacteroidetes RepID=HIS4_PARD8 Length = 239 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 108/248 (43%), Gaps = 15/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ DG+ V+ Q D + +AK + G L D+ + +GR+ Sbjct: 2 IELIPAIDIIDGKCVRLTQGDYATKKVYNEDPLEVAKMFEGNGIRRLHVVDLDGAREGRI 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + R+A + GG+K +D GA ++ S A+ +P + T +F Sbjct: 62 INYRILERIATRTSLIIDFGGGLKQEDDLEIAFESGAQMVTGGSIAVKNPEMFTSWISKF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I++G D + T E + +++ +G +++ + Sbjct: 122 GSEKIILGAD----------AKEKKIAISGWEETTSQELVPFIKGYYDKGITKVICTDIA 171 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG+ G ++ K++R E+ + +IASGG ++E + +A + + ++ I Sbjct: 172 RDGMLQGPAIDLYKEIRDEIPFLYIIASGGVSSIEDIEK-LSEAGIPAVIFGKAIYEGKI 230 Query: 240 NIGELKAY 247 + +L + Sbjct: 231 QLKDLLRF 238 >UniRef50_C0BNI2 Histidine biosynthesis protein n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BNI2_9BACT Length = 248 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 75/256 (29%), Positives = 128/256 (50%), Gaps = 9/256 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML RIIP L +VK F+N ++G+ V A+ + G DEL+F DI A+ R Sbjct: 1 MLKNRIIPILTFNGLGLVKTKGFKNPRMVGNPVQTARVFNSRGVDELIFLDIYATKQSRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ S V V + +P + GGI++++ +L GADK+ I S AL D + + F Sbjct: 61 INLSLVKEVIKECYMPVSIGGGIQTIDQINDLLKIGADKVVIKSKALTDKKFLKEAINFF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI + +D + + + +++ E+ AGE+++N +N Sbjct: 121 GSQCICISVDVLFVNNNYLIYNDLGLK---------ISLEEFITEMSLINAGELLVNSVN 171 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGV NG+D++ + KV ++ +P+IA+GG G EH+ F ++ ++S+FH Sbjct: 172 NDGVMNGFDIDLINKVEQMTTIPVIAAGGGGEPEHYSTLFNKTKINAVASSSIFHFTQYT 231 Query: 241 IGELKAYLATQGVEIR 256 ++K L +R Sbjct: 232 PLDIKNELKKFNFPVR 247 >UniRef50_D1BQK4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Firmicutes RepID=D1BQK4_VEIPT Length = 240 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 15/250 (6%) Query: 6 IIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 I P +D++DG+ V+ + I D V AK+Y L D+ + G+ V+ Sbjct: 2 IFPAIDLQDGRSVRLYKGDFAQETVINPDPVDQAKQYEAAKVGALHLVDLDGAKAGKPVN 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V V + GGI+ E LS G D++ + S AL +P L ++ +G Sbjct: 62 VDIVKAVRAAFTGILEIGGGIRDKEAVDLYLSLGVDRVILGSVALKNPKLTKQVIAEYGA 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + IV+G+D N E + D + + + GA ++ +++D Sbjct: 122 EHIVIGVD----------GKNGKVAAEGWLDQSDVPMTDLIGAMIEGGAKYFIVTDVDRD 171 Query: 183 GVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G + E L + +E ++ASGG +E ++ V ++ ++ I + Sbjct: 172 GTMQGANEELLGNLQKEFPTARIVASGGVRNLEDI-KSLEQKGVMDSIVGKALYEGTITL 230 Query: 242 GELKAYLATQ 251 E+ Y + Sbjct: 231 EEIGEYNQQK 240 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 1/98 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + +D ++ + G + L ++ +++ +K VR L GG E + Sbjct: 30 DPVDQAKQYEAAKVGALHLVDLDGAKAGKPVNVDIVKAVRAAFTGILEIGGGIRDKE-AV 88 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 + + VD + SV K ++ A + + I Sbjct: 89 DLYLSLGVDRVILGSVALKNPKLTKQVIAEYGAEHIVI 126 >UniRef50_A8S9L9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9L9_9FIRM Length = 239 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 97/251 (38%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++ P +D+R GQVV+ Q D A+ + GA L D+ + DG + Sbjct: 1 MQLFPAIDLRGGQVVRLTQGDYDRMTVYGQDPCAQARSFVAAGAKNLHVVDLDGAKDGTL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ +A+ + V GGI++ E K LS G + + S A+ D R+ ++ Sbjct: 61 SNYDTIAALAKQGGLYIEVGGGIRTEERIEKYLSLGVGRCILGSVAVTDFAFTARMLQKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + V G + Y V+ + + + + + G I+ + Sbjct: 121 GDKIAV-----------GVDAKDGYVAIHGWKEVSAEPGVAFCKRLAEAGCTAIIYTDIA 169 Query: 181 QDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG G +L +++ EV V ASGG + LE + A+ + + Sbjct: 170 CDGAMQGTNLSLYRQLAAEVPGVAFTASGGISSEAELLE-LQQMGTAAAILGKSLYTGAL 228 Query: 240 NIGELKAYLAT 250 ++ + Sbjct: 229 DLARCVQLVQD 239 >UniRef50_B4SDB6 Histidine biosynthesis protein n=9 Tax=Bacteria RepID=B4SDB6_PELPB Length = 256 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 131/256 (51%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M R+I LD++ ++KG+ +IG A RY ++G DEL++ D AS R Sbjct: 1 MRNIRLIARLDIKGPNLIKGIHLEGLRVIGSPNEYALRYYQQGVDELIYMDCVASLYDRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + A+ I +P V GGI+S+EDA +IL GADK+++N+ A+A+P LI ++ RF Sbjct: 61 HLGDIIRSAAKDIFVPMTVGGGIRSVEDATQILRSGADKVAVNTAAVANPKLINEISRRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+ I+ + ++ T + + WV++ GAGE++L ++ Sbjct: 121 GSQCMVLSIEAKEVGKDRW-----EVYTDNGRERTGLDVIAWVKKGVAMGAGEVLLTSVD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++G R G+D +K V +P+IASGG G E + D A + H Sbjct: 176 REGTRKGFDTALVKAVTAEVSIPVIASGGMGKPEDLVGVVSVGGADAVAMADILHYNRAG 235 Query: 241 IGELKAYLATQGVEIR 256 IGE++ G+ +R Sbjct: 236 IGEIRNVAKETGMGVR 251 >UniRef50_A3CTR9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Methanomicrobiales RepID=HIS4_METMJ Length = 239 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 108/251 (43%), Gaps = 14/251 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH--EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 I P +D+ DG+ V+ VQ R + GD A R+ +EGAD L ++ + Sbjct: 1 MEIYPAVDILDGRCVQLVQGRPEAATVYGDPAAWAHRWLDEGADGLHVVNLDGAFGRARK 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + + + GGI+S+EDAA L G D++ +++ A+ +P +I LA+ FG Sbjct: 61 NADLIRAFTRETETFTELGGGIRSVEDAAGWLDAGVDRVIVSTQAVREPEMIRTLAEEFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + ++ GID L W + + GAG ++ ++ Sbjct: 121 GERVMAGIDARAGE-----------VMIEGWERPAGSYLSWAERFESLGAGSLLYTNVDV 169 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +G++ G +E + ++ VP++ SGG + A RDA GA+ S + + + Sbjct: 170 EGLQQGIAIEPVTELLARVKVPVVVSGGISSPGDV-AALRDAGAAGAVLGSALYAGKVRL 228 Query: 242 GELKAYLATQG 252 E Sbjct: 229 PEAMEAAHANE 239 >UniRef50_C4G189 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G189_ABIDE Length = 238 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 111/250 (44%), Gaps = 15/250 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M A I P +D+ +G+VV+ ++ ++ ++V A G + L D+ + + Sbjct: 1 MAAMIIFPAIDIYEGKVVRLLKGDYNKMTIYSENVVDKACEIEAAGGEWLHLVDLEGAKE 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G + ++V + + + + GGI++ K ++ G ++I + + A D + ++ Sbjct: 61 GNTPNFTYVEEICKKTGLKVEIGGGIRTEATIEKYINAGVNRIILGTKAATDKEFLNKMT 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 D++ + V G ++ + VT D+V E+++ G I++ Sbjct: 121 DKYREKIAV-----------GIDVKDEKVAIKGWLEVTDKTIFDFVTELKEIGIKNIIVT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + +DG +G ++ +K+ + + + ASGG T++ + ++ + GA+ + Sbjct: 170 DIAKDGAMSGINVSFYEKLSKFTDMDITASGGVTTLDDLIR-LKNTGIYGAILGKAMYTG 228 Query: 238 IINIGELKAY 247 +++ E Sbjct: 229 NVDLREALKI 238 >UniRef50_A2C1S3 Imidazole glycerol-phosphate synthase n=1 Tax=Prochlorococcus marinus str. NATL1A RepID=A2C1S3_PROM1 Length = 248 Score = 173 bits (440), Expect = 4e-42, Method: Composition-based stats. Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 6/247 (2%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 RII LDV++ V+KG+ +GD LA Y ++G +E+VF D AS R Sbjct: 1 MRIIGRLDVKNNHVIKGIHLEGLRKVGDPQELAVEYYKQGIEEIVFMDAVASLYNRNNLF 60 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + E + +P + GG++SL+D +K L+ GADK+ IN+ + L +A ++G Q Sbjct: 61 HIIQKACEKVFVPIALGGGLRSLDDVSKALNAGADKVVINTALVNRIDLAKEIAQKYGSQ 120 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 C+V I+ + ++ ++ T+ +DW ++++ G GEI+L ++Q+G Sbjct: 121 CLVGSIEAKRENDSW------RVYVDNGREPTKHNVVDWAIKLKEAGVGEILLTSIDQEG 174 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 G+D+E +K++ E P+IASGG G +H + + + A H + + Sbjct: 175 TSKGFDIELIKQINESIRCPIIASGGYGNKKHLADLLKIVEPSAIAIAGSLHYKKDTVSS 234 Query: 244 LKAYLAT 250 +K + + Sbjct: 235 IKQEINS 241 >UniRef50_B4W8G6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=B4W8G6_9CAUL Length = 243 Score = 172 bits (437), Expect = 8e-42, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 99/247 (40%), Gaps = 11/247 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++DG V+ + + +A EGA+ + D+ + G Sbjct: 1 MLIYPAIDLKDGVCVRLMHGKFDQVTRYDEQPATRLSAFAAEGAEWIHVVDLDGAEAGEA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V + + + + ID+ GG++S D AK+L G ++ + S A+ P + F Sbjct: 61 VQHALIGELTKAIDVKIQSGGGVRSANDVAKLLDTGVSRVVVGSLAVTQPNDVAAWLKGF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I + D + + T+ + + + K +++ + Sbjct: 121 GAEHITLAFDVKIEDGVPVPALKG------WTQSSGVDLWTALDRYPKGLFKHLLVTDVG 174 Query: 181 QDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +LE L ++ R + L ASGG +++ A + +GA+ ++ Sbjct: 175 RDGAMTGPNLELLAEIRRRRPDLVLQASGGVSSLDDI-AAVKSLGCNGAIVGRALYENRF 233 Query: 240 NIGELKA 246 + + A Sbjct: 234 TLPDAIA 240 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 31/96 (32%), Gaps = 4/96 (4%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + + GA I + ++ + ++ + V + + GG + Sbjct: 30 EQPATRLSAFAAEGAEWIHVVDLDGAEAGEAVQHALIGELTKAIDVKIQSGGGVRSANDV 89 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + D V + S+ Q ++ A+L G Sbjct: 90 AKLL-DTGVSRVVVGSLAVTQP---NDVAAWLKGFG 121 >UniRef50_Q5NMD5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Zymomonas mobilis RepID=HIS4_ZYMMO Length = 250 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 94/253 (37%), Gaps = 16/253 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 I P +D+++G VV+ + D A+++ E GA L D+ + G + Sbjct: 6 IIFPAIDLKEGHVVRLSEGDMDRATIYDDDPAARARQFYEAGARYLHVVDLDGAFAGHAM 65 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + V + + + GGI+ + LS G ++ I + A +P L+ A ++ Sbjct: 66 NAAAVDAIVKAFPGTIELGGGIRDMNAIDGWLSRGISRVVIGTAAFENPDLVKEAAQKYP 125 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 Q +V + + ++ D + G ++ + + Sbjct: 126 GQIVV-----------AVDARDGMVTTKGWAEQSEISVTDMAERFADAGVVALLYTDVGR 174 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHKQII 239 DG++ G + E + +P+IASGG + R ++G + + + Sbjct: 175 DGLKKGCNSEATLALAAATDIPVIASGGVKDIGDIELLARHTKDGIEGVICGRAIYDGSL 234 Query: 240 NIGELKAYLATQG 252 ++ A G Sbjct: 235 DLKAALAIARQGG 247 >UniRef50_Q7V958 Putative imidazole glycerol phosphate synthase subunit hisF2 n=1 Tax=Prochlorococcus marinus str. MIT 9313 RepID=HIS62_PROMM Length = 261 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 14/265 (5%) Query: 1 MLAKRIIPCLD--VR------DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI 52 ML KR+IP L ++ +V QF + IGD V AK Y + ADELV D+ Sbjct: 1 MLKKRLIPKLQFSIKPSYRGPKPVLVITRQFDSKRAIGDPVSQAKIYEAQLADELVLVDL 60 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 +SD + +S ++E + P V GGI S E ++L GADK+ +NS A+ +P L Sbjct: 61 EGTSDSWPILLDTLSNMSESLATPLSVGGGITSFEQVQQLLDRGADKVVLNSGAVNNPQL 120 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 I +A+ +G QC+V+ ID +++ + + + + T W W + RGAG Sbjct: 121 IDLVANSYGSQCVVISIDIRKESDLSR-----HVYIDGGSTATDWSLFSWANDCASRGAG 175 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 E+++ ++ DG G DL+ ++++R ++PLIASGG G +HF+ + A + Sbjct: 176 ELLITSIDNDGTGTGLDLDSIRQLRYEVNLPLIASGGCGLAQHFVAGYEV-GASAVAAGT 234 Query: 233 VFHKQIINIGELKAYLATQGVEIRI 257 F ++ N + ++++ G+ IR+ Sbjct: 235 FFSQRDQNPMQCRSHIRNAGLPIRL 259 >UniRef50_Q88UE2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Lactobacillus RepID=HIS4_LACPL Length = 241 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 16/247 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + I P +D+R GQ V+ Q + I D V A++ G +L D+ + G Sbjct: 1 MQM-IFPAIDLRAGQSVRLYQGDFKQATLINPDPVVQAQQINAAGLQQLHMVDLDGAKSG 59 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R + + ++ + + + GGI++ E A + L G D++ + S AL DP L+ RL Sbjct: 60 RPENFATITAIRQAFTGTIELGGGIRTYELATRYLELGIDRLILGSVALTDPRLVKRLLS 119 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 FG + IV+G+D N Y + +Q + ++ + GA ++ Sbjct: 120 EFGGERIVIGLD----------GTNGYVAIKGWLEQSQTKMSTLMKTMTTSGAKHFIVTD 169 Query: 179 MNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + +DG G +L +++ +V LIASGG + + + + + + Sbjct: 170 VARDGTMQGPNLALYQELQAQVPTANLIASGGVRNLTDV-QVLQASGFKDVIIGKALAEG 228 Query: 238 IINIGEL 244 + + EL Sbjct: 229 GVTLAEL 235 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 32/98 (32%), Gaps = 1/98 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + + Q++ G ++ + ++ + + +R+ + GG T E Sbjct: 32 DPVVQAQQINAAGLQQLHMVDLDGAKSGRPENFATITAIRQAFTGTIELGGGIRTYELAT 91 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +D + SV + L + + + I Sbjct: 92 RYLE-LGIDRLILGSVALTDPRLVKRLLSEFGGERIVI 128 >UniRef50_A1ZT22 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZT22_9SPHI Length = 239 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 99/239 (41%), Gaps = 15/239 (6%) Query: 14 DGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVA 70 +GQ V+ Q + D + +A++YA+EG L D+ + G + V ++A Sbjct: 12 NGQCVRLTQGDYSQKRVYDKDPIEMAQKYADEGFQRLHVVDLDGAKSGAPKHLALVEQMA 71 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 ++ GGIK+ E +L GA +I S A+ P + FG I++ D Sbjct: 72 AKTNLTIDYGGGIKTTEQVQAVLDAGAAMANIGSLAVKQPEVFKGWLQTFGSDKILLASD 131 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 + + ++ D++ + G + +++DG+ G L Sbjct: 132 V----------KGEKIAINAWQDESEVSIYDFIADFIPSGLTQFFCTDVSKDGLLQGVAL 181 Query: 191 EQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 E K++ + + +IASGG +M+ + +DG + ++ I + ELK + Sbjct: 182 ELYCKLKQKFPTMTIIASGGVASMQDIED-LNKEGIDGVIVGKAIYENRIALEELKQFA 239 >UniRef50_Q039B4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Lactobacillales RepID=HIS4_LACC3 Length = 238 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 14/247 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++ P +D+ +G+ V+ Q ++ D + A+R + G L D+ + R + Sbjct: 1 MKLYPAIDLLNGKSVRLTQGDYDQVSLTEDPLYQAQRLTDAGFAHLHLVDLDGARAQRPI 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +++ ++R+ E + GGI++L L+ G D++ + S A++DP L+ + RFG Sbjct: 61 NRTVITRIREQTSAFIELGGGIRTLAAMEIYLTIGIDRLILGSAAVSDPDLVEQAIARFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 I VGID +Q + +Q+RG ++ + + Sbjct: 121 SNRIAVGID----------TRAGKVATNGWLTTSQQTANALLTAMQQRGVTTFIVTDIAK 170 Query: 182 DGVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG+ G + + L +++ +IASGG + + A + A+ + I Sbjct: 171 DGMMQGPNAQLLADLQQAMPQATIIASGGISLLADLHR-LQTAGIQAAIIGKAWQTGAIE 229 Query: 241 IGELKAY 247 + LK Sbjct: 230 LAMLKQM 236 Score = 50.2 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 1/99 (1%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + L Q + G + L ++ + + + ++RE + GG T+ Sbjct: 29 EDPLYQAQRLTDAGFAHLHLVDLDGARAQRPINRTVITRIREQTSAFIELGGGIRTLA-A 87 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +E + +D + S + + A + + + Sbjct: 88 MEIYLTIGIDRLILGSAAVSDPDLVEQAIARFGSNRIAV 126 >UniRef50_Q1IWD2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Deinococcus RepID=HIS4_DEIGD Length = 243 Score = 171 bits (434), Expect = 2e-41, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 100/243 (41%), Gaps = 15/243 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 L IIPC+D++ G+ V+ + + A+ +A GA + D+ A+ G Sbjct: 8 LQPLIIPCVDIQSGRAVRLYEGDPDRETVYFESPLEAARHWAALGAGLVHLVDLDAA-TG 66 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R +++ ++++ + +P V GGI+ A +L G ++ I + A+ +P L+ L Sbjct: 67 RGENRAVITQITAELGVPVEVGGGIRDRAAAEALLDAGVGRVVIGTAAVKNPALVRELIA 126 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 G +VV +D + + + + G ++ Sbjct: 127 AHGPSRVVVSLD----------ARGLDVAIHGWAEGSGVSVAELAPLLAEAGLETLIFTD 176 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + +DG G D + +++VR++ LI GG T++ + + GA+ ++ Sbjct: 177 VTRDGTLRGLDRDLMRQVRQLWSNTLIVGGGVATLDDV-RLLAEEGIQGAIVGRAIYEGT 235 Query: 239 INI 241 + Sbjct: 236 LVY 238 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 11/111 (9%) Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 L+ + GAG + L ++ G + + ++ VP+ GG Sbjct: 38 FESPLEAARHWAALGAGLVHLVDLDAA-TGRGENRAVITQITAELGVPVEVGGGIRDRA- 95 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAY---------LATQGVEIRI 257 EA DA V + + K + EL A L +G+++ I Sbjct: 96 AAEALLDAGVGRVVIGTAAVKNPALVRELIAAHGPSRVVVSLDARGLDVAI 146 >UniRef50_C7H029 Imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H029_9FIRM Length = 250 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 99/254 (38%), Positives = 148/254 (58%), Gaps = 6/254 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 + K I+PC+D+R G+VVKG++F + + D V LAK Y GAD LVFYDI AS + + + Sbjct: 1 MKKLIMPCMDIRHGKVVKGIKFEGVKDVADPVELAKYYDATGADILVFYDIAASVEDKQI 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + V V D+P GG+K++ED I+ GAD +SIN+ A+ +P L+ A++ G Sbjct: 61 YEGLFKSVRAVSDLPLVAGGGLKTIEDVDNIIKLGADMVSINTGAIDNPDLLNEAAEKIG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + +++ +D + T + L+W+ E RGAG +VLN ++ Sbjct: 121 SENVILSVDAKKVNGEYH------VFRNAGMMDTGLDALEWISEGYDRGAGILVLNSIDT 174 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DGV+ GYD+E LK EV ++ASGGAG M+ F EA V+ ALAASVFH + I I Sbjct: 175 DGVKAGYDIEMLKAAGEVTDAKIVASGGAGKMQDFKEALMLPKVEVALAASVFHYKEIVI 234 Query: 242 GELKAYLATQGVEI 255 +LK YL +G+++ Sbjct: 235 DDLKEYLRKEGIDV 248 >UniRef50_Q7MPK7 Putative imidazole glycerol phosphate synthase subunit hisF3 n=18 Tax=cellular organisms RepID=HIS63_VIBVY Length = 260 Score = 171 bits (433), Expect = 3e-41, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 133/237 (56%), Gaps = 4/237 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IP L +R+ +VK V+F+ + +GD + K + E+ ADEL DI AS G Sbjct: 6 MLRSRVIPVLLMREKGLVKTVKFKEGKYVGDPLNAVKIFNEQEADELTLLDIDASRLGHE 65 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + R+A +P C GGIK++E A +IL G +K+S++S +P +IT+LA+R Sbjct: 66 PDYVLIERIASECRMPLCYGGGIKTVEQAERILKLGVEKVSLSSAVFENPKIITQLAERV 125 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q IVV +D + T+ +T+++V+++Q GAGEIVLN ++ Sbjct: 126 GRQSIVVCLDVKKRLFGS----KFDCFTINGTKKQSVDTIEFVKQIQTLGAGEIVLNFID 181 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 DGV GYDL+ + K + + VPL GGAG ++ + + + GA A S+F + Sbjct: 182 NDGVMKGYDLDAVSKFKALVKVPLTVVGGAGCVDDIAKLVQQEKLVGAAAGSLFVFK 238 Score = 61.0 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 42/98 (42%), Gaps = 1/98 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + L+ V+ ++ A E+ L ++ + + D ++++ C +PL GG T+E Sbjct: 36 DPLNAVKIFNEQEADELTLLDIDASRLGHEPDYVLIERIASECRMPLCYGGGIKTVEQAE 95 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 + V+ +S + I +L + Q + + Sbjct: 96 RILK-LGVEKVSLSSAVFENPKIITQLAERVGRQSIVV 132 >UniRef50_C1CY68 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Deinococci RepID=C1CY68_DEIDV Length = 251 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 101/244 (41%), Gaps = 15/244 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIPC+D++ G+ V+ + + A+ + E GA + D+ A+ GR + Sbjct: 19 IIPCVDIQSGRAVRLYEGDPERETVYFDSPLDAARHWVERGAGLVHLVDLDAA-TGRGEN 77 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + ++ + +P V GGI+ E A +L G ++ I + A+ +P L+ L G Sbjct: 78 REVIRQITSELGVPVEVGGGIRDREAAEDLLRAGVHRVVIGTAAVRNPQLVADLIAAHGP 137 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + +VV +D + + + + G ++ + +D Sbjct: 138 ERVVVSLD----------ARGLEVATHGWAQGSGVNVAELTPGLADAGLELLIFTDVTRD 187 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G G + E +++VR++ LI GG M+ ++ ++GA+ ++ + Sbjct: 188 GTLKGLNRELMRQVRQLWINTLIVGGGVANMDDV-RLLQEERIEGAIVGRAIYEGTLAYP 246 Query: 243 ELKA 246 + Sbjct: 247 VILE 250 Score = 61.0 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 50/144 (34%), Gaps = 2/144 (1%) Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 R A R + V Y GD R V LD + +RGAG Sbjct: 3 ARYARRMSAPVPPAPLIIPCVDIQSGRAVRLYEGDPERETVYFDSPLDAARHWVERGAGL 62 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + L ++ G + E ++++ VP+ GG E + R A V + + Sbjct: 63 VHLVDLDAA-TGRGENREVIRQITSELGVPVEVGGGIRDREAAEDLLR-AGVHRVVIGTA 120 Query: 234 FHKQIINIGELKAYLATQGVEIRI 257 + + +L A + V + + Sbjct: 121 AVRNPQLVADLIAAHGPERVVVSL 144 >UniRef50_O29276 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Archaeoglobaceae RepID=HIS4_ARCFU Length = 238 Score = 170 bits (430), Expect = 6e-41, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 103/246 (41%), Gaps = 18/246 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 R+IP +D++DG+VV+ Q + E+ + + +AK++ E GA L D++ + GR+ Sbjct: 2 FRVIPAIDLKDGKVVRLRQGKEDEVTFEATNPIEVAKQWVEIGAKVLHVIDLSGAFQGRL 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ +A++ + V GGI+ A ++ G D++ + A+ + A ++ Sbjct: 62 RHEEIIAEIAKMAE--VQVGGGIRDFRVAERLFELGVDRVIFGTIAVERVEELREFAKKW 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + +V + V + + + + ++ Sbjct: 120 KGRVMV-----------AIDSKKGRVAVKGWKEVVELTPVQLAELYDDLDVS-FLYTNID 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G+ +G + E++++V + P+ +GG ++E + G + S + + + Sbjct: 168 VEGLVSGIERERIEEVVKSLRNPVYVAGGISSIEDI-RFAKRVGAAGVVIGSALYTKKLK 226 Query: 241 IGELKA 246 E Sbjct: 227 FEEAIK 232 >UniRef50_C8WPG6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Coriobacteriaceae RepID=C8WPG6_EGGLE Length = 257 Score = 169 bits (429), Expect = 7e-41, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 94/250 (37%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++P +D+ G+ V+ + D A+ + E+GA L D+ + G Sbjct: 1 MYLLPAIDILGGKAVRLAKGDYDRVTVYHDDPAAQAQLFEEQGATWLHVVDLDGARSGIP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V R+ + V GG++SL+ A++ G ++ + + +ADP ++ Sbjct: 61 ENIAIVERIMRKTLLKVEVGGGVRSLDTIARLADAGVSRVVLGTSLVADPDFAEAAIAQY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G G + +++ G +V + Sbjct: 121 GKLLCA-----------GIDAKGGEVAVAGWREGAGVAAEELARDMSALGFRHLVYTDIA 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD-VDGALAASVFHKQII 239 +DG++ G + ++ E P+IASGG ++ + A ++G +A ++ + Sbjct: 170 RDGMQTGIEAAAYVRMAEAFGHPVIASGGVAGVDDIVRLGEVAGSIEGVIAGRAVYEGAL 229 Query: 240 NIGELKAYLA 249 ++ E Sbjct: 230 SVQEGVRACD 239 >UniRef50_Q5WX95 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Legionella pneumophila RepID=HIS4_LEGPL Length = 239 Score = 168 bits (427), Expect = 1e-40, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 101/246 (41%), Gaps = 12/246 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGD---IVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ Q R ++ + A +A+ GA L D+ + G++ Sbjct: 1 MLVIPAIDLQSGRCVRLKQGRFDQVTQFSVFPIERALHFAKLGAKRLHVVDLDGARSGKM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + I GGI+S+E A + + G ++ I S A+ +P L ++ ++ Sbjct: 61 QQLELICSM-QKTGIAIQAGGGIRSIEQALECSNAGISQLVIGSLAITNPDLTIQIIEKI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + IV+ +D D + +N + + V + G I+ + Sbjct: 120 KPENIVLALDVRVDTKVPLLAING------WQNNSTSSLWEVVSYYENHGIKHILCTDIA 173 Query: 181 QDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG+ NG + + ++ E + ASGG M+ + + + ++ + Sbjct: 174 CDGMMNGPNFDLYQQAVEYFPQIAWQASGGIRHMQDIT-TLGSLGISAVILGLMLYQDNV 232 Query: 240 NIGELK 245 N EL Sbjct: 233 NFEELL 238 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 37/99 (37%), Gaps = 2/99 (2%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 ++ K GA + + ++ LE + + + + + A GG ++E LE Sbjct: 32 PIERALHFAKLGAKRLHVVDLDGARSGKMQQLELICSM-QKTGIAIQAGGGIRSIEQALE 90 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 +A + + S+ ++ + + + + + Sbjct: 91 C-SNAGISQLVIGSLAITNPDLTIQIIEKIKPENIVLAL 128 >UniRef50_C7TCJ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Lactobacillus rhamnosus RepID=C7TCJ1_LACRG Length = 249 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 103/246 (41%), Gaps = 14/246 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++ P +D+ GQ V+ Q ++ D + K G L D+ + + + Sbjct: 1 MQLYPAIDLLAGQSVRLTQGDYRQVSLTADPLTQVKNLTATGLKHLHLVDLDGARSQQPI 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +++ +S + + + GGI++L L+ G D++ + S A+ +P L+T+ +FG Sbjct: 61 NQAVISTIRQHTPAFIELGGGIRTLAIMDHYLNAGIDRLILGSVAVTNPELVTQAVQKFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 I VGID + + +Q + +RG ++ + + Sbjct: 121 ADKIAVGID----------ARAGKVATDGWLTTSTQSPTHLMQAMVRRGVTTFIVTDIGR 170 Query: 182 DGVRNGYDLEQLKKVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG+ G ++ L + + +V ++ASGG T+ A + A + A+ + Sbjct: 171 DGMMKGPNVALLAMLHQTVPNVNIVASGGVHTLADLT-ALQTAGIQAAVIGKAWQTGSFP 229 Query: 241 IGELKA 246 + +LK Sbjct: 230 LNKLKE 235 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 35/98 (35%), Gaps = 1/98 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + L V+ + G + L ++ + + + +R+ + GG T+ + Sbjct: 30 DPLTQVKNLTATGLKHLHLVDLDGARSQQPINQAVISTIRQHTPAFIELGGGIRTLA-IM 88 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 + + +A +D + SV + + + + Sbjct: 89 DHYLNAGIDRLILGSVAVTNPELVTQAVQKFGADKIAV 126 >UniRef50_Q3ICF4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Alteromonadales RepID=HIS4_PSEHT Length = 242 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 100/245 (40%), Gaps = 11/245 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPL---AKRYAEEGADELVFYDITASSDGRVVD 62 IIP LDV Q+V+ Q + + L K YA+ GA +L D+ + D Sbjct: 2 IIPALDVLQNQIVRLYQGKYETVQFYPFELGARLKEYADSGAGKLHLVDLEGARDPSKKQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + +++P+ V GGI+ +D + L GA+++ I S A+ + ++FG Sbjct: 62 WQHIQAATKALNVPYQVGGGIRCEQDVSDWLKAGANQVVIGSMAVEKREQVKAWIEQFGA 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + V+ +D A + +++ L+ V G + + +++D Sbjct: 122 EHFVIALDVNKTATGWAPATHG------WLTESEFGLLELVDFYANLGVIDFLCTDISKD 175 Query: 183 GVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G + ++ + + ASGG +++ + ++ + G + ++ Sbjct: 176 GTMTGPSFALYEDLIKHNSTIKVQASGGVSSLDDIKK-LKELGIGGIILGKSLLDGAFSV 234 Query: 242 GELKA 246 E A Sbjct: 235 EEALA 239 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 37/90 (41%), Gaps = 4/90 (4%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 ++E GAG++ L + + + ++ + +VP GG + + + Sbjct: 35 LKEYADSGAGKLHLVDLEGARDPSKKQWQHIQAATKALNVPYQVGGGIRCEQDVSDWLK- 93 Query: 223 ADVDGALAASVFHKQIINIGELKAYLATQG 252 A + + S+ ++ ++KA++ G Sbjct: 94 AGANQVVIGSMAVEKR---EQVKAWIEQFG 120 >UniRef50_D1Y7T0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7T0_9BACT Length = 237 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 96/246 (39%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+ GQ V+ + +A +A +GA +L D+ + +G Sbjct: 1 MLIYPAIDLYAGQAVRLQRGDYARMTVYSDRPETVAADFAAQGARQLHLIDLEGAKNGGT 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + + V GGI+S++ L G D++ + + A R R+ Sbjct: 61 PNLETIVAVKKSSGLFCQVGGGIRSMDAIVAYLDAGVDRVILGTAAATQAHFAARAVARY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + V G + + + T + + ++ + +Q G ++ ++ Sbjct: 121 GARIAV-----------GVDIKDGFAAVKGWTEKSPLKAFEFCRRMQSDGVSTLICTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++ K + + +IASGG +++ + GA+ + + I+ Sbjct: 170 RDGMMQGTNVALYKTLSTELKMRIIASGGVSSLDDVRR-LAALGLYGAIIGKACYTKAIS 228 Query: 241 IGELKA 246 I Sbjct: 229 IAAAIE 234 >UniRef50_P33734 Cyclase n=51 Tax=cellular organisms RepID=HIS5_YEAST Length = 552 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 89/314 (28%), Positives = 141/314 (44%), Gaps = 58/314 (18%) Query: 2 LAKRIIPCLDVR-----DGQVVKGVQ--------FRNHEIIGDIVPLAKRYAEEGADELV 48 L +RII CLDVR D V KG Q + +G V LA++Y ++GADE+ Sbjct: 236 LTRRIIACLDVRTNDQGDLVVTKGDQYDVREKSDGKGVRNLGKPVQLAQKYYQQGADEVT 295 Query: 49 FYDITASSDGRVVD---KSWVSRVAEVIDIPFCVAGGIKS-----------LEDAAKILS 94 F +IT+ D + D + + A+ + +P V GGIK LE A+ Sbjct: 296 FLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFR 355 Query: 95 FGADKISINSPALADPTLITR-------------LADRFGVQCIVVGIDTW--------- 132 GADK+SI + A+ ++ +G Q +V+ +D Sbjct: 356 SGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQAD 415 Query: 133 ---------YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 Y G+ + + + + + GAGEI+LN +++DG Sbjct: 416 TKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDG 475 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +GYDLE ++ V++ +P+IAS GAG EHF EAF D L A +FH+ + + Sbjct: 476 SNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVND 535 Query: 244 LKAYLATQGVEIRI 257 +K YL G+++R+ Sbjct: 536 VKEYLLEHGLKVRM 549 >UniRef50_C6UMW5 Putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UMW5_HODCD Length = 241 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 98/251 (39%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 R + +DV++G+ V+ + + + +++ + D + D+ + G Sbjct: 1 MRFLASIDVKNGECVRLCRGQMADCRVYASSPLEAVRKFNLQCCDLVHIVDLDGAVCGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + A + V GG+++L DA L GA K+ + + A+AD + ++ + Sbjct: 61 QNWRSILEAARQLKGCVQVGGGVRTLADAKLYLEGGASKVVLGTSAIADMEFVCHVSWLY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V G + + T V+ V +++ ++ +N Sbjct: 121 PGRVCV-----------GVDTFGELVATDGWTAVSCVRCDQLVPKLEAARVSCLIWTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG G + + L +V VP+I SGG T ++ + G + +++ Sbjct: 170 RDGTLQGVNFDALDRVLAASAVPVIVSGGVATALDLIKLHNLYADKLAGVICGKALYERT 229 Query: 239 INIGELKAYLA 249 + ++ L+ Sbjct: 230 LTARFARSILS 240 >UniRef50_A8ZUC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Proteobacteria RepID=HIS4_DESOH Length = 251 Score = 166 bits (421), Expect = 6e-40, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 102/252 (40%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ +Q D +A+R+AE GA+ + D+ + + Sbjct: 1 MMVIPAVDIKGGKCVRLLQGDMNAETVFSDDPGAMAERWAEAGAELIHVVDLDGAIEKSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +S + + +P V GGI+ ++ G +I I S A+ P L+T F Sbjct: 61 RNLKAISALIRRVGVPVQVGGGIREIDTVKMYADLGVARIVIGSAAVNHPDLVTAACREF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + ++ G + E T T D + G I ++ Sbjct: 121 PGRIVL-----------GIDARDGRVATEGWTSTTDIAAADLAARFEGCGVAAINFTDIH 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF--RDADVDGALAASVFHKQI 238 +DG+R G ++ ++ +P++ASGG T++ ++ V G + + Sbjct: 170 RDGMRTGPNIPAIEAFARATAIPVVASGGVSTIDDIQALLGIQEFGVTGVITGRALYDGT 229 Query: 239 INIGELKAYLAT 250 +++ E A + Sbjct: 230 LDLAEAIAVASA 241 >UniRef50_Q67KH9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Bacteria RepID=HIS4_SYMTH Length = 249 Score = 166 bits (421), Expect = 7e-40, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 20/257 (7%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + + P +D++DGQVV+ Q R E D V +A R+AE GA + D+ + G Sbjct: 1 MRLDLYPAIDLKDGQVVRLRQGRMDEATVYGVDPVRIAARWAEAGARWIHVVDLDGALRG 60 Query: 59 RVVDKSWVSRVAEVI-----DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 R + + V + E + + + GG+++LE L+ G + I + AL + Sbjct: 61 RPQNAAAVRAIVEALRQRHPGVRVQLGGGLRTLEALEAALALGVSRAIIGTSALE-GDVA 119 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 R RFG + V ID + VT+ +D +++ G Sbjct: 120 ARAVARFGPDRVAVSID----------ARGGFVAARGWVEVTRVRAVDLAVRMREVGVRT 169 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +V + DG+ G + +L+ + + +IASGG ++E V GA+ Sbjct: 170 VVYTDIATDGMLTGPNFAELEMM-GRTGLDVIASGGISSLEDIRRLTEIPGVAGAIIGRA 228 Query: 234 FHKQIINIGELKAYLAT 250 + +++ E + Sbjct: 229 LYTGAVDLAEALSLCGE 245 >UniRef50_Q056S8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Leptospira RepID=HIS4_LEPBL Length = 241 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 103/251 (41%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+ D V+ + E + LA+ +A+ GA L D+ + + Sbjct: 1 MIIIPAIDLFDNCAVRLFKGNYKEKKIYSSEPWKLAEGFAKNGATLLHLVDLNGARNQLG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +++ + ++ + + + GGI+ E A G D+ + + A+ DP L+ D + Sbjct: 61 INEDSILKIRKTTSLKVQLGGGIRDKEKLAYYDKIGIDRFILGTAAVTDPDLLKFALDNY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + +VV +D ++ + + D + + K G IV + Sbjct: 121 EKERVVVAVD----------AIDGIVKIAGWEKDSGVRYRDLMDRLAKAGIEHIVFTDIA 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE---AFRDADVDGALAASVFHKQ 237 QDG G +L+ +++ +IASGG +++ ++ + G + ++ Sbjct: 171 QDGTLAGPNLKAYQEILNSYPFQVIASGGISSLKDLMDLSSLKTKIPLYGVITGKALYEG 230 Query: 238 IINIGELKAYL 248 +++ + + + Sbjct: 231 KLDLAKAISSI 241 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 33/100 (33%), Gaps = 1/100 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 E + K GA + L +N + G + + + K+R+ + + GG E Sbjct: 31 EPWKLAEGFAKNGATLLHLVDLNGARNQLGINEDSILKIRKTTSLKVQLGGGIRDKEKL- 89 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + +D + + + + V + + Sbjct: 90 AYYDKIGIDRFILGTAAVTDPDLLKFALDNYEKERVVVAV 129 >UniRef50_A7H8C3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Bacteria RepID=HIS4_ANADF Length = 238 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 15/241 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ G+ V+ + A+ +A GA L D+ + G Sbjct: 1 MLVIPAIDLMGGEAVRLEKGDFATKTVYARHPAEKAEEFARAGATLLHVVDLDGAKAGWP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ V + EV I + GG++SL D K+L+ G + + + A+ L+ + RF Sbjct: 61 VNLDAVRAICEVPGIEVELGGGLRSLPDIEKVLALGVRYVVLGTAAVERLGLVEQACQRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q G N T +D ++V+ G G + + Sbjct: 121 PGQVRA-----------GIDARNGEVKIAGWLEGTGLAAVDVARKVKGAGVGLVEYTDVA 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G D +++ +P++ASGG +++ R A + G + +++ I+ Sbjct: 170 RDGMFTGVDAAGAARIQAEAGIPVVASGGVASLDDVTAC-RAAGLAGVIVGKALYERRID 228 Query: 241 I 241 + Sbjct: 229 L 229 >UniRef50_B2I5X7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=21 Tax=Bacteria RepID=HIS4_XYLF2 Length = 269 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 10/250 (4%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + + P LD+R+G VV+ Q ++P A+ +A+ GA + D+ A+ G Sbjct: 1 MNFIVYPALDIRNGAVVRLQQGDYARQTRYDDQVLPRAQAFADSGATWMHLVDLDAAKAG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + ++ + GG++S +D A+IL GA ++ I S A+ T + Sbjct: 61 GYTLAPLLRQITRATGLQVQTGGGVRSRDDVARILDAGAARVVIGSLAVRQMTCVIEWLQ 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 FG + I V +DT DA T V + Q+ G ++ Sbjct: 121 AFGPERITVALDTRQDAGGVW-----RLPVHGWTEVAEATLEALAQQYAAAGLRHLLCTD 175 Query: 179 MNQDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + +DG+ +G +++ +R + V + SGGA + + A + A G + + Sbjct: 176 IARDGMLSGPNMDVYAYLRALVPAVQIQVSGGARDVADVVAA-KMAGCAGIVLGKALLEG 234 Query: 238 IINIGELKAY 247 + + E + Sbjct: 235 RLALKEAVQH 244 >UniRef50_P59520 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=HIS4_BUCBP Length = 241 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 94/245 (38%), Gaps = 10/245 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP +D+ +G +V+ Q +I +A +Y +GA + D+ + Sbjct: 2 IIPSIDLIEGNIVRLYQGNYDTKTFYQNNIYDIALKYYNQGAKIVHLVDLDGALCPNNKQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 S + + + V GGI+S +D +L GA ++ I S A+ + T + + FG Sbjct: 62 TSLIKNLLNYFNFHIQVGGGIRSYKDVETLLLNGAKRVVIGSSAINNITEVEKWLLEFGY 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + IV+ +D + + + ++ G ++ + +D Sbjct: 122 KSIVLALDVYVRNNG-----YKEVVINGWKNRSNVSLESVLERFSTLGIKYVLCTDVKKD 176 Query: 183 GVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G + K + + +V SGG GT+ + A + + + + + ++ Sbjct: 177 GTCLGPNFTLYKNISKLFKNVCFQLSGGIGTISDVISA-KKSGIKDIIIGRALLENKFSL 235 Query: 242 GELKA 246 E Sbjct: 236 LEAIR 240 >UniRef50_C5E2I9 KLTH0H05368p n=17 Tax=cellular organisms RepID=C5E2I9_LACTC Length = 550 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 89/314 (28%), Positives = 137/314 (43%), Gaps = 58/314 (18%) Query: 2 LAKRIIPCLDVR-----DGQVVKGVQ--------FRNHEIIGDIVPLAKRYAEEGADELV 48 L +RII CLDVR D V KG Q N +G V LA++Y E+GADE+ Sbjct: 234 LTRRIIACLDVRTNDQGDLVVTKGDQYDVREKQEGGNVRNLGKPVELAQKYYEQGADEVT 293 Query: 49 FYDITASSDGRVVD---KSWVSRVAEVIDIPFCVAGGIKSLED-----------AAKILS 94 F +IT+ D + D + + A+ + +P V GGIK + D AA + Sbjct: 294 FLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTHIPALQVAALYFA 353 Query: 95 FGADKISINSPALADPTLITR-------------LADRFGVQCIVVGIDTWYDAETG--- 138 GADK+SI S A+ ++ +G Q +V+ +D G Sbjct: 354 SGADKVSIGSDAVYAAEKYYELGERGDGASPIETISKSYGAQAVVISVDPKRVYVDGPES 413 Query: 139 ---------------KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + + + + + GAGE++LN +++DG Sbjct: 414 VKHKTFETKFPNEKGQTWCWYQCTIKGGRESRDMGVWELTRACEALGAGEVLLNCIDKDG 473 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +GYDLE + +E +P+IAS GAG +HF EAF D L A +FH+ + + Sbjct: 474 SNSGYDLELINHAKEAVKIPVIASSGAGEPKHFKEAFESTGADACLGAGMFHRGEYTVND 533 Query: 244 LKAYLATQGVEIRI 257 +K YL G ++R+ Sbjct: 534 VKQYLLDSGFKVRM 547 >UniRef50_A3HVE8 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVE8_9SPHI Length = 244 Score = 165 bits (419), Expect = 1e-39, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 108/252 (42%), Gaps = 13/252 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP + + +G+ V+ + I + + +A+ + G L D+ + G Sbjct: 2 FEVIPSIWLINGKCVRLKRGDFATEEAISNNPLEIAQGFESIGIKRLHLVDLDGARRGEP 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +A ++ GG+ + D K FGA ++I+S A P ++ + Sbjct: 62 KNYHILEAIAGYTNLHVDFTGGVTTDGDVIKSFEFGAKTVTISSAAANYPERFSQFILSY 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I + DT ++ + T+ + D ++ RG + + + Sbjct: 122 GREKINLAADTNPA--------DRKIKIRGWLKKTEIDLYDHIEFFYDRGLKYLKCSDVT 173 Query: 181 QDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DGV G + E V++ ++ + ASGG ++E F E + V+ A+ +++ ++ Sbjct: 174 RDGVMVGPNFELYADLVKKFPNLNIAASGGVRSIEDFKE-LKKLGVNAAVFGRAYYEGML 232 Query: 240 NIGELKAYLATQ 251 + +L +++ + Sbjct: 233 KLEDLADFISEK 244 >UniRef50_D0CY30 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 2 n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CY30_9RHOB Length = 282 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 101/256 (39%), Gaps = 15/256 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 R+ P +++++G+ V + R E + D V A+ +A GA+ + D + +GR Sbjct: 36 MRVYPTMELQNGRCVTLDKGRLDEPMIWHVDPVETAQGWAAAGAEWMHLTDFD-AIEGRD 94 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V ++ ++P +AGG +S E + + GA +I I + A DP L LA + Sbjct: 95 TNSALVEQIIRSAELPVQLAGGFRSREQVERWIDKGAGRIVIGTLAARDPHLFKELAKLY 154 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q ++ Y + + + +++ I++ ++ Sbjct: 155 PDQIVLAVDVWQ-----------GYVMTDGWRTQSAFSPEAFIEAFADAPLAAILVTDID 203 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 D V L + + P+IASG + + ++ G L ++ ++ Sbjct: 204 SDMVDVEAQLGLISGLAAHSRTPVIASGVVRSSDDISRLAYIPNISGVLVGRALFRKTVD 263 Query: 241 IGELKAYLATQGVEIR 256 + E A T + Sbjct: 264 LSEALAVARTAHEPVA 279 >UniRef50_A7FU80 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=104 Tax=Bacteria RepID=HIS4_CLOB1 Length = 242 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 118/250 (47%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+++G+ ++ Q + D + +A ++ E GA+ + D+ + G + Sbjct: 1 MIILPAIDLKEGKCIRLYQGDFKASKVVAEDPIEVALKFKENGAEYIHIVDLDGALTGEI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + S +S + + I+IP + GGI++L ++ G +++ + + AL + L+ ++ Sbjct: 61 KNLSIISSIIKTINIPVELGGGIRNLNTIDMLIGAGIERVILGTAALNNRGLVEEAVKKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + G N+ V+ +D+ +E++K G I+ ++ Sbjct: 121 DEKIAI-----------GIDAKNEKVAINGWLNVSSINYIDFAKEMEKIGVRNIIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G +L+QL+K+ E + +IASGG +E + ++ DV GA+ + IN Sbjct: 170 KDGTLKGPNLKQLEKLNESINCNVIASGGIKDIEDL-KGIKEMDVYGAIVGKAIYSGNIN 228 Query: 241 IGELKAYLAT 250 + E + Sbjct: 229 LNEAIKIINK 238 Score = 41.0 bits (95), Expect = 0.043, Method: Composition-based stats. Identities = 9/95 (9%), Positives = 33/95 (34%), Gaps = 1/95 (1%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + ++ + ++ GA I + ++ +L + + + ++P+ GG + Sbjct: 30 EDPIEVALKFKENGAEYIHIVDLDGALTGEIKNLSIISSIIKTINIPVELGGGIRNLNTI 89 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + A ++ + + + E + Sbjct: 90 -DMLIGAGIERVILGTAALNNRGLVEEAVKKYDEK 123 >UniRef50_B6YWA8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=cellular organisms RepID=HIS4_THEON Length = 229 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 96/248 (38%), Gaps = 22/248 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI--IGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 RI P +D+ G+ V+ + + ++ GD V +A R+ E D++ D+ + G+ Sbjct: 1 MRIYPAIDLMGGKAVRLYRGQKEKVKVYGDPVEIASRFTEL-VDKIHVVDLDGAFTGKPQ 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + V + E + V GG +S E AK GA+ + I + A D + ++ Sbjct: 60 NLDVVKEIIEETGLKVQVGGGFRSYESIAKAYEIGAENVIIGTKAF-DLEFLEKI----- 113 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 D + + + + + + +++ + + + Sbjct: 114 -------TDNFDGITVSLDARGGKIAVKGWLEESSLKVGEAYEMLREY-VDRFIYTSIER 165 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG G E +++ + I +GG +++ L+ R GA+ ++ +++ Sbjct: 166 DGTLTGI--ESIERFWK--DEEFIYAGGVSSVDDVLK-LRRVGFSGAIVGKALYESEVSL 220 Query: 242 GELKAYLA 249 EL L Sbjct: 221 KELLEVLE 228 >UniRef50_C6N0X3 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0X3_9GAMM Length = 240 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 98/246 (39%), Gaps = 12/246 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ Q + +I V A +A+ GA L D+ + G + Sbjct: 1 MILIPAIDIQAGRCVRLKQGQFEQITIFDTPPVERAAYFAKIGAQRLHVVDLDGAQIGSM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + I GGI+SLE A S G + + S A+++ L T++ Sbjct: 61 QQLPLICSM-QNTGINVQAGGGIRSLEQAKLCFSAGIANLVLGSIAISNRELATQIIQEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I++ +D + ++ D V Q+ G +I+ + Sbjct: 120 SPKNIILALDIRLINGIPIPATHG------WQTMSNRNLWDVVSYYQQLGIQQILCTDIA 173 Query: 181 QDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG+ G + ++ V+ + ASGG E EA V A+ ++ + Sbjct: 174 CDGMMQGPNFSLYQEAVKRFPMIDWQASGGIRNQEDI-EALDKLGVAAAILGLSLYQGTL 232 Query: 240 NIGELK 245 ++ E K Sbjct: 233 HLAEYK 238 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 39/105 (37%), Gaps = 6/105 (5%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 ++ K GA + + ++ + + L + + + + + A GG ++E Sbjct: 31 PPVERAAYFAKIGAQRLHVVDLDGAQIGSMQQLPLICSM-QNTGINVQAGGGIRSLEQAK 89 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGV----EIRIC 258 F A + + S+ ++ ++ + + +IR+ Sbjct: 90 LCF-SAGIANLVLGSIAISNRELATQIIQEISPKNIILALDIRLI 133 >UniRef50_Q12NS9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Gammaproteobacteria RepID=HIS4_SHEDO Length = 250 Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 15/250 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP +D+ DGQVV+ Q + + K Y ++GA L D+T + D Sbjct: 2 IIPAIDLIDGQVVRLYQGDYDKQTTFDLSPLAQLKSYQDQGAKLLHIVDLTGAKDPNQRQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 +S + +D+ V GGI+S + ++L+ G ++ I S A+ +P L+ +++G Sbjct: 62 IKLISELVAGLDVDIQVGGGIRSEQQVTELLAIGVKRVVIGSLAVKEPELVKSWLNKYGS 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG-----AGEIVLN 177 I + +D +A K V E ++ G ++ Sbjct: 122 DAICLALDVNINANGEK-----IVAVSGWQSAGGKTLESLVAEFERPGSKQTALKHALVT 176 Query: 178 MMNQDGVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 +++DG G + ++ + ASGG T++ A +D+ G + Sbjct: 177 DISRDGTLTGANTALYTELAAAYPTILWQASGGIATLDDVS-AVKDSKAAGIIIGKALLI 235 Query: 237 QIINIGELKA 246 + E Sbjct: 236 NQFTVEEAIQ 245 >UniRef50_Q7VQW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=117 Tax=Enterobacteriaceae RepID=HIS4_BLOFL Length = 251 Score = 163 bits (413), Expect = 5e-39, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 102/256 (39%), Gaps = 12/256 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 IIP LD+ +G V+ Q + G+ + Y ++GA + D+ + + + Sbjct: 2 IIPALDIINGDAVRLYQGKYQSQSHYGNPYSILSTYVQQGATMIHLVDLDGARNPKNRQL 61 Query: 64 SWVSRV---AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 S + + A + + GGI+ D +L FG +++ + S A+ P + + F Sbjct: 62 SLIKELTHTAITSHLKIQIGGGIRHATDIKTLLKFGVNRVILGSIAITHPKKVKQWFTYF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 +V+ +D + D++ + + T + + ++ G ++ ++ Sbjct: 122 NPSSLVLALDIYIDSKNNR-----KVVIHGWQKETNIQLEEVIENYNSVGLKHVLCTDIS 176 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G ++ + + + + ASGG + L+ R + V+ + F ++ Sbjct: 177 KDGTLLGSNINLYQSICYKWPKISFQASGGVAKLTEILQ-LRSSGVNSIIIGRSFLEKKF 235 Query: 240 NIGELKAYLATQGVEI 255 + E + + Sbjct: 236 TLTEAISCWQNASSRV 251 >UniRef50_C4L175 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L175_EXISA Length = 237 Score = 163 bits (412), Expect = 6e-39, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 16/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN--HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 R++P +D+ G++V+ + E GD L K + + D+ + G Sbjct: 1 MRLLPAIDLIGGKIVRLTEGDFSTEEQYGDPYELLKAWQ-GKVPMIHLIDLEGAKAGEPR 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V + + GGI+S ++ GAD++ + + A DP + + +++G Sbjct: 60 HLDVVRYAKSLGFL-VQTGGGIRSEASLDAVMETGADRVLLGTKAFTDPDFLDKAIEKYG 118 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V + T+ + + Q++ KRG I+ + Sbjct: 119 KRVAV-----------ALDAYDGKVAINGWQEATKLDDISVAQDLVKRGIETILYTDIGS 167 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG NG ++ ++K +R++ +V LIASGG T E E + A +D A+ ++I Sbjct: 168 DGKLNGPNVTRMKALRQIVNVTLIASGGVTTEEDVKE-LKMAKIDEAVVGKALLSGKVSI 226 Query: 242 GELKAY 247 EL + Sbjct: 227 EELIEW 232 >UniRef50_Q1GHT0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1 n=15 Tax=Rhodobacterales RepID=HIS41_SILST Length = 247 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 90/256 (35%), Gaps = 15/256 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +++ DG+ V + + D V AK +AE GA+ + D + G Sbjct: 1 MMIYPTMELLDGRCVTLDKGNLDAPMIWHVDPVETAKGFAEAGAEWMHLTDFN-ALQGDS 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ V + +P + GGI+S E A + G ++ I + A DP + LA + Sbjct: 60 SNQDLVEELIRTAGLPIQLGGGIRSREQAEFWIEKGVGRVVIGTMAAYDPAAVAELAKYY 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q ++ E + W +V+ I++ ++ Sbjct: 120 PDQVVLAVDVWQ-----------GQVMTEGWRKSGAWTPEAFVKAFGNAPFAGILVTDID 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 D L + + E H P+IASG + + ++ GAL + I Sbjct: 169 SDMSDLDAQLGLISGLAEQAHSPVIASGVVRSKDDISRLKYLPNISGALVGRALFNKTIT 228 Query: 241 IGELKAYLATQGVEIR 256 + E + Sbjct: 229 LEEAMETAQPNPEPVA 244 >UniRef50_C4R8P0 Imidazole glycerol phosphate synthase (Glutamine amidotransferase:cyclase) n=8 Tax=Saccharomycetales RepID=C4R8P0_PICPG Length = 561 Score = 162 bits (411), Expect = 9e-39, Method: Composition-based stats. Identities = 89/313 (28%), Positives = 142/313 (45%), Gaps = 58/313 (18%) Query: 2 LAKRIIPCLDVR---DGQVV--KGVQFR--------NHEIIGDIVPLAKRYAEEGADELV 48 L +RII CLDVR G +V KG Q+ + +G V +A++Y ++GADE+ Sbjct: 246 LTRRIIACLDVRTNDSGDLVVTKGDQYDVREKSESGDVRNLGKPVEMAEKYYQQGADEVT 305 Query: 49 FYDITASSDGRVVD---KSWVSRVAEVIDIPFCVAGGIKSLED-----------AAKILS 94 F +IT+ + + D + R AE + +P V GGIK + D A Sbjct: 306 FLNITSFRNSPIKDAPMLEVLKRAAETVFVPLTVGGGIKDVVDPDGTKVPALKVATLYFR 365 Query: 95 FGADKISINSPALADPTLITR-------------LADRFGVQCIVVGIDT---------- 131 GADK+SI + A+ R ++ +GVQ +V+ +D Sbjct: 366 AGADKVSIGTDAVLAAEEFYRNNEKGTGLTPIETISASYGVQAVVISVDPKRFYVADPSK 425 Query: 132 --------WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + G+ + + V + +K GAGEI+ N +++DG Sbjct: 426 TPYKTIKTKFPGPNGENYCYYKVTSQGGRNVHDLGAWELCYACEKLGAGEILCNCIDKDG 485 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +GYDLE + ++ +P+IAS GAG HF E FR + D AL A +FH+ + E Sbjct: 486 SNSGYDLELIDYIKSATKLPVIASSGAGNPSHFEEVFRKTETDAALGAGMFHRGEYTVKE 545 Query: 244 LKAYLATQGVEIR 256 +K +L +G+ +R Sbjct: 546 VKDFLTKRGLLVR 558 >UniRef50_C6Y3G6 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamideisomerase n=2 Tax=Pedobacter RepID=C6Y3G6_PEDHD Length = 249 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 101/248 (40%), Gaps = 11/248 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+ DG+VV+ + I + + Y G + + D+ + G Sbjct: 1 MYIIPAIDILDGKVVRLTEGDYNQKTVYDVSIAEMIETYRSNGTEFIHIIDLNGAK-GDF 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + V + D+ GGI++++ +L G ++ + + A+ +P + L+ Sbjct: 60 SNQKALFEVIKKTDMRVQYGGGIRTIKQVTDLLDAGIHRVIVGTQAITNPDFLQELSKEV 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G D +++ + + +D+V + + G + +N Sbjct: 120 G-----KKYDYANRIVIAIDVLDEVIKYSGWMESSPIKLMDYVDKCLQLGFFRFLCTDIN 174 Query: 181 QDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +E KK+ E + LIASGG +M+ E D+ + ++ I Sbjct: 175 KDGKLGGAAVELYKKLLEHSPFIKLIASGGVSSMKDIEE-LDKYDIRSVVVGKAIYENRI 233 Query: 240 NIGELKAY 247 I ++K + Sbjct: 234 TIDQIKEW 241 Score = 42.9 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 38/96 (39%), Gaps = 4/96 (4%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEH 215 + ++ + G I ++++ +G + + + + L +V + + + GG T++ Sbjct: 30 VSIAEMIETYRSNGTEFI--HIIDLNGAKGDFSNQKALFEVIKKTDMRVQYGGGIRTIKQ 87 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + DA + + + + EL + + Sbjct: 88 VTDLL-DAGIHRVIVGTQAITNPDFLQELSKEVGKK 122 >UniRef50_C8WUX9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WUX9_ALIAD Length = 252 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 19/253 (7%) Query: 6 IIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 + P +D+ G+VV+ Q GD +A R + GA L D+ A+ G+ + Sbjct: 8 VYPAIDILGGEVVRLRQGDYQQVTRYDGDPAGVAGRLCDAGARFLHVVDLDAARSGQSDN 67 Query: 63 KSWVSRVAE---VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + V + E V GGI++ + A+ L G ++ I + A+ ++ A Sbjct: 68 ERAVRAIVETAASYGAAVQVGGGIRTKDAIARWLEAGVARVVIGT-AVRQVEVVAEWAQE 126 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FG +V G+D T+W D +E+ K G + ++ + Sbjct: 127 FGGHRLVAGLD----------GRKGRLAVSGWLEETEWSIFDLARELAKVGLVQALVTDV 176 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +L+ L + + IASGG G+++ + A R A + GA+ H I Sbjct: 177 ERDGTGEGPNLD-LALGVQETGLFAIASGGIGSIDDVV-AVRRAGLAGAVIGKALHDGRI 234 Query: 240 NIGELKAYLATQG 252 ++GEL LA + Sbjct: 235 HLGELFQRLAQEE 247 >UniRef50_D1RFK6 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RFK6_LEGLO Length = 246 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 101/247 (40%), Gaps = 12/247 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ Q + ++ + A +A+ GA L D+ + G + Sbjct: 1 MILIPAIDLQAGRCVRLRQGQFDQVTQFDMSPIDRASYFAKLGAKRLHIVDLDGAKIGTM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + + GGI+SLE A S G + I S A+ DP L T++ + Sbjct: 61 QQLPLICTM-QHTGVTVQAGGGIRSLEQAKTCYSAGISLLVIGSIAITDPGLTTKIINEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I++ +D + + + + + V Q+ G +I+ + Sbjct: 120 SPKNIILALDIRMENKIPLPATHG------WQTTSTMNLWEVVSFYQQLGITQILCTDIA 173 Query: 181 QDGVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG+ G + + ++ E ++ ASGG + + + + A+ ++ + Sbjct: 174 SDGMMQGPNFDLYQEAVERFPNIAWQASGGIRHQDDINK-LQKLGIKAAILGLTMYQDVF 232 Query: 240 NIGELKA 246 N+ + + Sbjct: 233 NLKSILS 239 Score = 42.5 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 12/97 (12%), Positives = 33/97 (34%), Gaps = 2/97 (2%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 +D K GA + + ++ + L + + + V + A GG ++E Sbjct: 30 MSPIDRASYFAKLGAKRLHIVDLDGAKIGTMQQLPLICTM-QHTGVTVQAGGGIRSLEQA 88 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 A + + S+ ++ ++ + + Sbjct: 89 KTC-YSAGISLLVIGSIAITDPGLTTKIINEISPKNI 124 >UniRef50_Q6SHC0 Imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=uncultured marine bacterium 440 RepID=Q6SHC0_9BACT Length = 262 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 132/263 (50%), Gaps = 17/263 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-------- 56 RIIP L +++G +V+ F H+ IG+++ AKR + DELV+ DIT + Sbjct: 6 RIIPVLFIKNGLIVRSQNFYKHQFIGNVIEQAKRLNDYDVDELVYIDITRNDNYDLGRDD 65 Query: 57 ---DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + S + +++V +P GGI+S++DA + GADKI+INS D ++ Sbjct: 66 LLVKSKRDIMSIIKDISKVCFMPLTFGGGIRSVDDAVNRIRAGADKITINSLLYKDLNIV 125 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 ++ G Q +V ID E + T E +D++++++ G GE Sbjct: 126 KKIISEIGSQAVVASIDYKIINE------KLIIFNNFGQDNTNIELIDFIKKIENLGVGE 179 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + + DG++ G+DL +KK+ ++P+IA GAG++EHFLEA + + A + Sbjct: 180 FFIQNVELDGMQKGFDLNNIKKIVNSVNLPVIACSGAGSLEHFLEAVKIKGLSAVAAGNY 239 Query: 234 FHKQIINIGELKAYLATQGVEIR 256 F+ + + +K L + +R Sbjct: 240 FNYKERSYPIIKKELKDFNINVR 262 >UniRef50_B9K9S2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=HIS4_THENN Length = 248 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 104/261 (39%), Gaps = 21/261 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +VV+ V+ + D + L ++ EEG + D++ + + Sbjct: 1 MLVIPAIDLYRKKVVRMVKGKKENTIFYEKDPIELVEKLVEEGFSLIHVVDLSRAIEESD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +++ D + GGI+ LE A K+L G + ++S L DP+ + +L Sbjct: 61 ENLPVLEKLSSYAD-HIQIGGGIRILEYAKKLLGMGFRRQIVSSKVLEDPSFLKKLK--- 116 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + + + + V +++ G EIV + Sbjct: 117 ---------EIGVNPVFSLDTREGKVAFKGWLDEKDIDPVFLVNRLKEFGLEEIVHTEIE 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGA---GTMEHFLEAFRDAD--VDGALAASVFH 235 +DG +D +++ V +IA+GG ++E LE R + + G + F Sbjct: 168 KDGTLKEHDFSLTERIALETGVKVIAAGGISSERSLEEALEVHRRTNGLLKGVIVGRAFL 227 Query: 236 KQIINIGELKAYLATQGVEIR 256 + + + +K Y + + Sbjct: 228 EGTLTVEVMKRYACQENNSVS 248 >UniRef50_Q1AX07 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=HIS4_RUBXD Length = 243 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 16/248 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 + P +D++ G+ V+ Q D V A+ + GA L D+ + +GR V Sbjct: 9 VFPAIDLKGGRCVRLRQGDFGRERVYDADPVGRAREWERRGARALHVVDLDGAREGRPVQ 68 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + +A +P V GGI++LED GA ++ + + A+AD R + G Sbjct: 69 LALIREIARAAGVPLQVGGGIRTLEDVRAARRAGAARVVVGTAAVADRDFRLRALEELGA 128 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 +V R + + E+ G ++ +++D Sbjct: 129 DLVV-----------AVDAREGVVATHGWQRQSGVGAAELAGELAAEGVRAVLFTDISRD 177 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G G LE+ +V + +P IASGG R V GA+ + ++ + Sbjct: 178 GTGEGAALERTAEVAGI--IPTIASGGVRGAGDIRALARTPGVVGAVVGTALYEGQATLE 235 Query: 243 ELKAYLAT 250 EL A Sbjct: 236 ELLAAAGG 243 >UniRef50_B4U8M5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8M5_HYDS0 Length = 234 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 93/244 (38%), Gaps = 17/244 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + IIP +D++DG VV+ + + + + K + + G + D+ + G Sbjct: 1 MKDFIIPAIDIKDGAVVRLKEGKFENVKVYRQNPIDQFKLFVDLGFTRIHIVDLDGAKVG 60 Query: 59 RVVDKSWVSR-VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + + + + D + GGI+SLE A + GAD I + + A+ D RL Sbjct: 61 IPKNLKLLEDMLKQKNDAKVEIGGGIRSLETAKALFEIGADYIIVGTLAVKDKEEFIRLL 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + + I+ N + D + + Sbjct: 121 ELYKDRIIL-----------SVDAKNGKVAIGGWEEESSISPCDMARIYDNYPIESYLYT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +N DG G D+ K ++ P+IASGG ++E ++ V+G + ++ Sbjct: 170 NINIDGTLTGVDINPYKDFKKCTTKPIIASGGVASLEDVIKL--KTVVNGVVVGKAIYEN 227 Query: 238 IINI 241 I+I Sbjct: 228 KIDI 231 Score = 42.2 bits (98), Expect = 0.018, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 33/95 (34%), Gaps = 2/95 (2%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHF 216 +D + G I + ++ V +L+ L+ +++ + GG ++E Sbjct: 33 NPIDQFKLFVDLGFTRIHIVDLDGAKVGIPKNLKLLEDMLKQKNDAKVEIGGGIRSLETA 92 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +A + D + ++ K L + Sbjct: 93 -KALFEIGADYIIVGTLAVKDKEEFIRLLELYKDR 126 >UniRef50_B0SDS6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Leptospira biflexa serovar Patoc RepID=HIS4_LEPBA Length = 247 Score = 159 bits (403), Expect = 8e-38, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 108/254 (42%), Gaps = 16/254 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++P +D+ D + V+ +Q + + + + E+GA + D+ A+ G+ Sbjct: 1 MLVLPAIDLLDNEAVRLLQGDYSKKTVYSSSPEKMIQVFEEQGATLIHIVDLNAAKTGKS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + ++ E + + GGI+++++ G ++ + + A+ +P ++ + F Sbjct: 61 ENEKTIKKIKEKCTVDLELGGGIRTIDNMKFYDGLGVSRLILGTVAVEEPNVVEKAVSLF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IV+G+D N Y + + D++ + G ++ + Sbjct: 121 GQDRIVIGVD----------AKNGYVRTKGWESNSGILYKDFLTTMYGMGIRHVIFTDIA 170 Query: 181 QDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHKQ 237 +DG+ G + ++ E + L+ASGG + E +E + + GA+ ++ Sbjct: 171 RDGMMEGPNTLAYAELLETFPDLQLVASGGVSSKEDLVELYDKTNGKLFGAITGKAIYEG 230 Query: 238 IINIGELKAYLATQ 251 +++ E L + Sbjct: 231 KLDLKESIRILNQK 244 >UniRef50_Q7MPP3 Putative imidazole glycerol phosphate synthase subunit hisF2 n=1 Tax=Vibrio vulnificus YJ016 RepID=HIS62_VIBVY Length = 272 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 124/257 (48%), Gaps = 6/257 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IPC+ + VV+ F+N+ IG++ + DE++ DI AS + R Sbjct: 4 MLKIRLIPCIVTKGELVVQSFAFKNYLPIGNVKTAIDFFVNWDVDEIIVNDIDASKEFRE 63 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + VS A+ +P V GGIK+LE +L GADK++IN+ A+ DP I A F Sbjct: 64 PNVDLVSWAAKECFVPLTVGGGIKTLEHIRNLLKAGADKVTINTKAIDDPDFIKNAASVF 123 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI V +D K + + V ++ GAGEI+LN ++ Sbjct: 124 GSQCITVSVDAIKQGNVYKLYDYRDGRVLDVDVVDWVRKVE------SYGAGEILLNSVD 177 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG R GYD+E LK V + +P+IA GG G + E + AA++F + Sbjct: 178 RDGSREGYDVELLKTVSGIVSIPVIALGGIGRFDQLAEGAIEGGCQALSAANIFQHMEHS 237 Query: 241 IGELKAYLATQGVEIRI 257 KA + + +R+ Sbjct: 238 TIAAKAQMRNAKLNVRL 254 >UniRef50_A4EBZ6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EBZ6_9ACTN Length = 247 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 102/258 (39%), Gaps = 20/258 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+ G+VV+ + D V +A+ +AE+GA + D++++ Sbjct: 1 MILFPAIDLIGGKVVRLERGDRSRCKVYSDDPVAVARSFAEQGASWVHVVDLSSAFGEDE 60 Query: 61 ----VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + + + V + V GG++SL ++ +GA +I++ + + +P Sbjct: 61 DTCAANSAAIKAICGVDGLSVDVGGGVRSLARIDELAGYGARRIALGTVLVTEPGFAEVA 120 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 A FG + + D V ++ + G +V Sbjct: 121 AQGFGELLVADIA-----------ARDGQVKVNGWRDGAGVALDDAVAQLSELGFKHLVY 169 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL--EAFRDADVDGALAASVF 234 + +DG++ G D+ + V EV P++ASGG ++ A + ++GA+ Sbjct: 170 TDIARDGMQTGIDVAAYRHVAEVAGFPVVASGGISALDDIRALAAVGEGAIEGAITGRAL 229 Query: 235 HKQIINIGELKAYLATQG 252 ++ + + A + Sbjct: 230 YEGNFTLAQALAAARGEE 247 >UniRef50_B1ZW12 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Opitutaceae RepID=HIS4_OPITP Length = 243 Score = 158 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 40/242 (16%), Positives = 91/242 (37%), Gaps = 19/242 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++ G+ V+ Q R + + +A ++ G++ + D+ + G Sbjct: 1 MTIYPAIDIKGGRCVRLTQGRAEQETIYAQNPADVAMQFRAAGSEWVHVVDLDGAFAGEP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + + + GG+++ + L+ G ++ + + A + + L F Sbjct: 61 QNLAAVQAIV-AVGMKVQFGGGLRTRAAVERALALGVSRVVLGTRAAESESFVGELVQAF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + V G N + TL + + G ++ + Sbjct: 120 GDKIAV-----------GIDAKNGKVAVKGWVATADLSTLVLARRMDTLGVATLIHTDIG 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE----AFRDADVDGALAASVFHK 236 DG+ G +L + + +IASGG + + A R A++DG + ++ Sbjct: 169 TDGMLTGPNLAAQEALCSAVKSRVIASGGVSRRDDVVNLAKLAQRHANLDGVIVGKALYE 228 Query: 237 QI 238 + Sbjct: 229 RR 230 >UniRef50_C7GBG4 Imidazoleglycerol phosphate synthase, cyclase subunit n=2 Tax=Roseburia RepID=C7GBG4_9FIRM Length = 252 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 91/258 (35%), Positives = 131/258 (50%), Gaps = 6/258 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IP L + +VKGV F + + ++P K Y DEL+ DI A+++ R Sbjct: 1 MLKVRVIPTLLYKSVGLVKGVGFNSWRRVDTVLPAIKVYNMREVDELILLDIEATNEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + + +PFCV GGI ++ +L GADK++INS A + +LIT A F Sbjct: 61 PDYDEIRDFSRECFVPFCVGGGICHIDQIKNLLRAGADKVAINSAAYDNLSLITEGAKLF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIV ID + + T W DW+ +V + GAGEI+L + Sbjct: 121 GSQCIVASIDCRKIDGEYH------CFSHNGSVDTGWLLQDWIIKVVEAGAGEILLTSVE 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG GYD+E +K + +VP+IASGGAG EH +A ++ AAS++H Sbjct: 175 LDGTMEGYDVEMIKIATSLVNVPVIASGGAGNYEHMRKAVQEGGASAVAAASIYHFTEQT 234 Query: 241 IGELKAYLATQGVEIRIC 258 E K YL GV +R+ Sbjct: 235 PKEAKEYLGEHGVAVRMI 252 >UniRef50_Q058A3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=HIS4_BUCCC Length = 245 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 99/250 (39%), Gaps = 11/250 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP LD G++V+ Q + DI ++Y +GA + D+ ++ Sbjct: 2 IIPSLDFIHGKIVRLYQGNYNNKISYKKDIFKQIEKYIYQGATYIHLVDLDGCNNPENRQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 KS + + ++ F V GGI+S D + G KI I + A+ P + +G Sbjct: 62 KSMFNIFSNFKNVSFQVGGGIRSKRDIENLFHAGVSKIVIGTSAILYPNKFKKWLKNYGS 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + V+ +D + + T+ D +++ G I+ +++D Sbjct: 122 KNFVLSVD-----ININTKKENKIAIQGWKKTTEINLDDAIKQFIPYGLKNILCTDISRD 176 Query: 183 GVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G +G ++ K ++ + ++ L +SGG ++ + +V+ + + Sbjct: 177 GTFSGPNISLYKYLKNKFPNIVLQSSGGINSISDIYN-LKKNNVEHVIVGRALLENKFTF 235 Query: 242 GEL-KAYLAT 250 E K +L Sbjct: 236 LEASKCWLKE 245 >UniRef50_D1B860 Histidine biosynthesis protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B860_THEAS Length = 232 Score = 156 bits (396), Expect = 5e-37, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 90/246 (36%), Gaps = 18/246 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+ G+VV+ R +A +A+ G D+ + GR Sbjct: 1 MEIYPAVDLYGGKVVRLTGGRFQDATVYPTSPGEMALLFAQAGVRWAHVVDLEGAKTGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V + A + GGI+S++ LS GA ++ + S + F Sbjct: 61 VHLWALEAFAGA-GLKVQFGGGIRSIQSVRDALSAGATRVMMGSALFDRSVDVVEAHRLF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + H + T+ T ++ + + G ++ + Sbjct: 120 GPAILP-----------AVDHRGWRVSVKGWTQGTDIPVDRALENLSRVGFSLFLVTDGD 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G DLE +K+ + IA+GG G + H R+A GA+ ++ I+ Sbjct: 169 RDGTLSGPDLEGYRKICARYGI--IAAGGIGELGHL-RGLRNAGAAGAVLGKALYEGAIS 225 Query: 241 IGELKA 246 I E Sbjct: 226 IEEAMR 231 >UniRef50_B5YE89 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Dictyoglomus RepID=HIS4_DICT6 Length = 242 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 102/254 (40%), Gaps = 20/254 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+ +VV+ + +I+ + + LAK + E+GA L D+ ++ D Sbjct: 1 MLIIPAIDIYKHKVVRMETGKKEKIVLEFNNPLDLAKYWEEKGAKALHLIDLQSAIDAND 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 KS V + + IP V GG +S E + +S+G ++ ++S + + L ++ Sbjct: 61 ESKSIVRDIVRSVSIPVEVGGGYRSREKIEEAISWGVWRVIVSSILGMELDYLLDLFSKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I + G + E D +++ E++ ++ Sbjct: 121 ENKIIP-----------SIDWYDGKVGIKGWQDF--IEWRDIKRKIDLLKVREVIFTDIS 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF---RDAD-VDGALAASVFHK 236 +DG G +LE +K + + +GG ++E ++ + + G + + Sbjct: 168 RDGTLKGVNLENIKNFLSLHDYDVWIAGGISSIEDVIKIKDLSENTGRIKGIIIGRALLE 227 Query: 237 QIINIGELKAYLAT 250 IN E K + Sbjct: 228 GKINWEEAKKIIDA 241 >UniRef50_A7SPR8 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SPR8_NEMVE Length = 545 Score = 153 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 81/294 (27%), Positives = 139/294 (47%), Gaps = 56/294 (19%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVS---RVAEVIDI 75 K V+ +GD V L +R+ +GADE+ F +IT+ + D + + + E I + Sbjct: 253 KPVKGDVKA-VGDPVELGERFFSDGADEIAFLNITSFRSSPIHDLAMLKLLRKCCERIFV 311 Query: 76 PFCVAGGIKS---------------------LEDAAKILSFGADKISINSPALADPTLI- 113 PF V GGI+ LE AA GADK+S+ S A+ Sbjct: 312 PFTVGGGIRDIYALDPDSVEEGKPVMRQFSALEVAAMYFKSGADKVSVASDAVYAAEEFI 371 Query: 114 ------------TRLADRFGVQCIVVGIDT------------------WYDAETGKYHVN 143 ++A+R+G Q +V+ +DT Y G+ +V Sbjct: 372 ASGHKKTGKTSIEKIAERYGRQAVVLAVDTKTVYVPSPDSTKHHTVKARYPGPNGEKYVW 431 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 + + V+ ++ GAGEI+LN +++DG +GYDL+ +K V+ +P Sbjct: 432 WQCTVKGGRETRDVGAYELVKACEELGAGEILLNNIDRDGTNHGYDLDLVKMVKGAVSIP 491 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 +IAS GAG + F++ FR+ + DGA+A ++FH+ ++I ++K +L +G +R+ Sbjct: 492 VIASSGAGHVSDFVDLFRETNADGAMAGAIFHRGEVDITDVKEHLRNEGFTVRL 545 >UniRef50_C6XVQ0 Histidine biosynthesis protein n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XVQ0_PEDHD Length = 288 Score = 153 bits (387), Expect = 6e-36, Method: Composition-based stats. Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 7/256 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+ L V+DG VV+ + F+ + +G + + G DE++ DI+A+ Sbjct: 1 MLKKRVAANLVVKDGIVVQSIGFKKYLPVGKPEIAIEFLNQWGIDEIILTDISATRKQSG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + R A+ +P V GGI + ++L GADKIS+N+ A+ P LIT A F Sbjct: 61 PDFDMIRRAAQKCFVPLTVGGGISNTGQMKELLHNGADKISLNNAAITTPELITETAHIF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+ ID + + + + ++ + + GAGEI++N ++ Sbjct: 121 GGQCVVISIDGIHTNKGFRIYDYLT------HSALDISPSEFAKRAEDSGAGEILINSVD 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G+D E + V V ++P+I GGA F+E F + A AA+ FH + Sbjct: 175 RDGSYLGFDHELINSVCSVVNIPVIVCGGAKNAGDFIEVFSKTNASAATAANFFHFSEHS 234 Query: 241 IGELKAYLATQGVEIR 256 + K+ L + +++R Sbjct: 235 VNITKSIL-NKKMDVR 249 >UniRef50_C2FZQ4 Possible isomerase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZQ4_9SPHI Length = 250 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 101/248 (40%), Gaps = 10/248 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +DV D +VV+ + + RY G + + D+ + G Sbjct: 1 MYIIPAIDVLDKKVVRLREGNYDDVTTYDISLEEQIDRYHANGTELVHIIDLNGAK-GDF 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ ++ + ++ GG++S+E +++ G ++ + + A+ +P + L+ Sbjct: 60 SNQEYLFNIIRKTEMKIQYGGGVRSIEKVKELIDAGVFRVIVGTQAITNPEFLEELSTL- 118 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + D A +++ + + ++++ + G + ++ Sbjct: 119 -NEGKIKYADHIVIAIDV---LDEVIKYSGWLESSPIKLIEYIDKCLALGFYRFLCTDIS 174 Query: 181 QDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +E KK+ + + LI SGG +M+ + ++ + ++ I Sbjct: 175 KDGKLGGAGVELYKKLLDHSPIIKLIGSGGISSMDDIRKLQELGRMESCVVGKAIYENRI 234 Query: 240 NIGELKAY 247 +I E++ + Sbjct: 235 SIEEIQDW 242 Score = 40.2 bits (93), Expect = 0.068, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 4/96 (4%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEH 215 + + G ++++++ +G + + + E L + + + GG ++E Sbjct: 30 ISLEEQIDRYHANGTE--LVHIIDLNGAKGDFSNQEYLFNIIRKTEMKIQYGGGVRSIEK 87 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 E DA V + + + EL + Sbjct: 88 VKELI-DAGVFRVIVGTQAITNPEFLEELSTLNEGK 122 >UniRef50_A1ZVN4 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZVN4_9SPHI Length = 246 Score = 151 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 101/250 (40%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I+P + + G+VV+ ++ + + + LA + G L D+ + ++ Sbjct: 2 IKIVPSIAILGGKVVRTIKGDIDQVQVYDTNPLDLALEFENNGIKHLHLVDLDGAKARQI 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + +A + GGI +D GA ++ + A+ + + Sbjct: 62 VNYNILEMLASYTQLEIDYTGGITRDDDIRTAFECGAKHVTAATVAVHEREKFLSWVITY 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G +++ D ++ + + T + ++ ++ +RG + + Sbjct: 122 GGNKVILAAD----------ALDGVVLTKGWRKNTGIDLVEHIKSYHERGVRFVKTTEIG 171 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++G G + + KK+R E + ++ASGG ++E + V G + ++ I Sbjct: 172 RNGTLEGPNFDTYKKLRTEFPELQILASGGIRSIEDIEQ-LDALGVAGVIIGKSYYDGQI 230 Query: 240 NIGELKAYLA 249 + +L+ ++ Sbjct: 231 KLKDLQKFIG 240 >UniRef50_Q0AP83 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Alphaproteobacteria RepID=HIS4_MARMM Length = 244 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 101/252 (40%), Gaps = 12/252 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+ DG+VV+ + + D + +A+++ E GA + D++ + DG Sbjct: 1 MILYPAIDLLDGRVVRLHKGAFDAVTDYGDDPMRVAEQFGEAGAVWVHIVDLSGARDGAR 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + E + GG++S ED +L+ G +++ I S A+ D + + Sbjct: 61 RQGALIRSLCE-TGLRVQTGGGVRSAEDIEDLLAAGVERVIIGSLAVTDTNRVAGWLQNY 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G I + +D + + T + D + + G ++ + Sbjct: 120 GGDRITLALDVRQIGGQYRPALKG------WTDMADTTLDDVISAYEGTGLAHALVTDIG 173 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG +G ++ K++ + ++ ASGG +++ A + ++ Sbjct: 174 RDGDLSGPNIALYKRLATDYPNIDWQASGGVSSLDDLRAARAAGAAGA-ITGKALYEGRF 232 Query: 240 NIGELKAYLATQ 251 +GE A L Sbjct: 233 TVGEAIACLRDA 244 >UniRef50_B9U3E3 HisA n=1 Tax=Taylorella equigenitalis RepID=B9U3E3_9BURK Length = 251 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 104/259 (40%), Gaps = 23/259 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFY--DITASSDG 58 IIP + ++DG+ V D + LAK++A+ GAD L + AS+ Sbjct: 1 MWIIPSIYIQDGKCVHVSYGDKTSSSPFEIDPLDLAKKWADLGADRLHIVQLGLNASTQN 60 Query: 59 RVV---DKSWVSRVAEVID--IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + +S++ E + +P +AGGIK++ L G D + + S + DP + Sbjct: 61 ATSLSKNNEVLSKLIEEVSHYLPLQIAGGIKTMASIESYLDMGFDFVVVGSAGVKDPHFM 120 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 F Q I+ G + +S ++VT+++ + Q + G Sbjct: 121 NDACSAFNGQVIL-----------GLDARDGKVVTDSWSKVTKFDAVTIAQRLTDEGIDS 169 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTME--HFLEAFRDADVDGALAA 231 I+ M DG +LE + VP++A G G + H ++ D VDG + Sbjct: 170 IIYTDMGPDGNMTEVNLEATLNFAKAVDVPVLACGDVGQLSRFHEIKTLVDHGVDGIILG 229 Query: 232 SVFHKQIINIGELKAYLAT 250 + ++ E + + Sbjct: 230 KSLDLGVYSLQEAIDIVDS 248 Score = 40.6 bits (94), Expect = 0.054, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 8/102 (7%) Query: 157 WETLDWVQEVQKRGAGEIVL-----NMMNQDGVRNGYDLEQLKKVREVCH--VPLIASGG 209 + LD ++ GA + + N Q+ + E L K+ E +PL +GG Sbjct: 30 IDPLDLAKKWADLGADRLHIVQLGLNASTQNATSLSKNNEVLSKLIEEVSHYLPLQIAGG 89 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 TM D D + S K + + + Q Sbjct: 90 IKTMASIESYL-DMGFDFVVVGSAGVKDPHFMNDACSAFNGQ 130 >UniRef50_A0LAC8 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAC8_MAGSM Length = 260 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 7/224 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 M R+IP L +++G++VK V+F +GD V AK + ++ DEL DI+AS G Sbjct: 1 MRRIRVIPTLLLKEGRLVKTVRFNQAKATYVGDPVNTAKIFNDKEVDELAVLDISASRRG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 D V ++A +P GG+++L+ ++ G +K+ +N+ + L+ Sbjct: 61 AEPDFECVEQLASECFMPLLYGGGVRNLQQIQRLFHSGVEKVMLNTAFFSGSGLLQEAVK 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 +G Q + V ID D + R T + + Q+ ++ GAGE++LN Sbjct: 121 IYGSQSLGVSIDVKKDLWG-----RYRVMSQGGQRKTGLDPVVAAQQAEQAGAGELLLNA 175 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 M+QDG++ GYDLE +++V +P+IA GGA ++ F Sbjct: 176 MDQDGMQQGYDLELVQRVSRGVAIPVIAVGGAASVADFRTVVTQ 219 Score = 63.7 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 39/100 (39%), Gaps = 1/100 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + ++ + + E+ + ++ D E ++++ C +PL+ GG ++ Sbjct: 33 DPVNTAKIFNDKEVDELAVLDISASRRGAEPDFECVEQLASECFMPLLYGGGVRNLQQIQ 92 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 F + V+ + + F + E +Q + + I Sbjct: 93 RLF-HSGVEKVMLNTAFFSGSGLLQEAVKIYGSQSLGVSI 131 >UniRef50_C1FJN8 Predicted protein n=13 Tax=cellular organisms RepID=C1FJN8_9CHLO Length = 601 Score = 149 bits (377), Expect = 8e-35, Method: Composition-based stats. Identities = 85/311 (27%), Positives = 132/311 (42%), Gaps = 58/311 (18%) Query: 2 LAKRIIPCLDVRD---GQVVKGVQ----------FRNHEIIGDIVPLAKRYAEEGADELV 48 LAKR+I CLDVR G +V + +G V LA +Y ++GADE+ Sbjct: 283 LAKRVIACLDVRSNDAGDLVVTKGDSYDVREKDDGNDVRNLGKPVELAGKYFKQGADEVA 342 Query: 49 FYDITASSD---GRVVDKSWVSRVAEVIDIPFCVAGGIKSLED-----------AAKILS 94 F +IT D + R +E + +P V GGI+ D AA Sbjct: 343 FLNITGYRDLPLTDAPMLEVLRRSSETVFVPLTVGGGIRDFTDSNGVSYTALEVAAAYFK 402 Query: 95 FGADKISINSPALADPTLI-------------TRLADRFGVQCIVVGIDTWY-------- 133 GADK+SI S A+ ++++R+GVQ +VV ID Sbjct: 403 AGADKVSIGSDAVYVAEQYYANDKKKDGCTSIEQISERYGVQAMVVSIDPRRAYVADPSE 462 Query: 134 ----------DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 G+ +V + + ++ G GEI+LN +++DG Sbjct: 463 TKNRCIKTSRPGPNGEEYVWFQCTVKGGREGRDIGAYELAIAMEDLGCGEILLNCIDEDG 522 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 NG+D E + V + +P+IAS GAG +HF + F ALAA +FH+ ++I E Sbjct: 523 QGNGFDHELVGLVADAVTIPVIASSGAGEPKHFTDVFNATKCSAALAAGIFHRGEVDISE 582 Query: 244 LKAYLATQGVE 254 +K ++ + Sbjct: 583 VKDHMKGGKIP 593 >UniRef50_Q8TYD6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Methanopyrus kandleri RepID=HIS4_METKA Length = 242 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 102/252 (40%), Gaps = 14/252 (5%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDG 58 +A +IP +DV +G+ V+ V+ D V A +++E + D+ A+ G Sbjct: 1 MAFVVIPSVDVVEGKCVQLVEGDPERRTFESDDPVETAHQWSEF-FPWIHVVDVDAAR-G 58 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + R+ E +D V GGI+S E A +++ GAD++ + + A D +++ D Sbjct: 59 EGDNSDIIGRICEEVDAKVQVGGGIRSAERAEELIELGADRLIVGTVAFTDKDDFSKIVD 118 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 I V + + N D ++ + A + Sbjct: 119 VCHDHGIEVFVALDVN-------ENHEVLVSGWKEDAGVTLEDAIERFNEV-ADGYLTTA 170 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 ++ +G G D + ++K +P++ +GG +++ A ++A G + + + Sbjct: 171 VHVEGKEMGIDEKVVEKSTGATDLPVLYAGGIASIKDVKRA-KEAGAYGVVIGTALYHGD 229 Query: 239 INIGELKAYLAT 250 I+ L + Sbjct: 230 IDPVALLDLMEE 241 Score = 52.9 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 34/105 (32%), Gaps = 3/105 (2%) Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 R + ++ + + I + ++ G + + + ++ E + GG Sbjct: 26 RRTFESDDPVETAHQWSEF-FPWIHVVDVDAA-RGEGDNSDIIGRICEEVDAKVQVGGGI 83 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 + E E D + +V + ++ G+E+ Sbjct: 84 RSAERAEELIE-LGADRLIVGTVAFTDKDDFSKIVDVCHDHGIEV 127 >UniRef50_A3UE29 HisF (Cyclase) n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UE29_9RHOB Length = 261 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 28/273 (10%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD--ITASSDG 58 ML R+IP L + +GQ+V+ F H+IIGD + R+ E DEL++ D TA Sbjct: 1 MLMPRLIPVLLLMNGQLVRSETFTTHQIIGDPLHEVARFNEWKVDELIYLDISRTAGLAQ 60 Query: 59 RVVD---------KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 D + VA +P G + SL+ I GADK++IN+ A Sbjct: 61 GRRDAGNRAYADAMDVLEAVASHCFMPLTWGGHVTSLDQVRDIFKRGADKVAINTAAYET 120 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 P LIT+++ RFG Q +VV ID + T + + W +E + R Sbjct: 121 PDLITQVSKRFGAQAMVVSIDARQIENG------YEVMTQGGRTATGRDPVSWAKEAEDR 174 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GAGEI+L +++DG GYD +++V + +P+IA G G EH+ + + Sbjct: 175 GAGEILLQSLDRDGRGTGYDTTLIEQVSQAVTIPVIACSGVGVYEHYAKGLKAGADA--- 231 Query: 230 AASVFHKQIINIGEL-----KAYLATQGVEIRI 257 V I + EL K L G ++R+ Sbjct: 232 ---VAAANIWHFKELADRGGKRALQRAGFDVRM 261 >UniRef50_D2L5A7 Histidine biosynthesis protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5A7_9DELT Length = 261 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 130/256 (50%), Gaps = 7/256 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+IP + V+ G VV+ + FR + +G + + DE+V I D Sbjct: 1 MLKKRLIPVVLVKQGLVVQSIGFRRYLPVGRPKITVEFFNRWDCDEIVLLAIDREPD-LA 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V+ +P V GG++ +ED ++L GADK+S+N+ A DP LITR A+ F Sbjct: 60 RLAGLTAHVSGAAFVPLTVGGGVRRIEDFQELLRAGADKVSLNTAAFRDPELITRAAEAF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +VV ID A+ T + D+ +E ++RGAGEI+LN ++ Sbjct: 120 GNQEVVVSIDARRHADG-----RYEVFVGGGREATGADPRDFAREAERRGAGEILLNAID 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + GYDLE +++V +P+IA GG G +EH EA A+++FH + Sbjct: 175 RDGGKQGYDLELVRRVATAVSIPVIALGGVGRIEHVPEAIGAGAAAA-AASNIFHHIEHS 233 Query: 241 IGELKAYLATQGVEIR 256 K + G+ +R Sbjct: 234 TILAKQAMHKAGIAVR 249 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 10/99 (10%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH----VPLIASGGAGTMEHFLE 218 V+ + EIVL ++++ DL +L + VPL GG +E F E Sbjct: 36 VEFFNRWDCDEIVLLAIDRE-----PDLARLAGLTAHVSGAAFVPLTVGGGVRRIEDFQE 90 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 R A D + + I Q V + I Sbjct: 91 LLR-AGADKVSLNTAAFRDPELITRAAEAFGNQEVVVSI 128 >UniRef50_B9WJS1 Imidazole glycerol phosphate synthase [includes: glutamine amidotransferase; cyclase], putative n=6 Tax=cellular organisms RepID=B9WJS1_CANDC Length = 622 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 88/330 (26%), Positives = 142/330 (43%), Gaps = 75/330 (22%) Query: 2 LAKRIIPCLDVR---DGQVVKGVQFRNH-------------------EIIGDIVPLAKRY 39 L +RII CLDVR DG +V + + +G V LA +Y Sbjct: 288 LTRRIIACLDVRTNDDGDLV-VTKGDQYNVREQQSSSSKISENSNQVRNLGKPVELATKY 346 Query: 40 AEEGADELVFYDITASSDGRVVDKSW---VSRVAEVIDIPFCVAGGIKSLED-------- 88 +GADE+ F +IT+ + + D + + AE I +P V GGIK L D Sbjct: 347 YNQGADEITFLNITSFRNSPLKDLPMLQVLRKSAETIFVPLTVGGGIKDLYDSETKKIIP 406 Query: 89 ----AAKILSFGADKISINSPALADPTLI-------------TRLADRFGVQCIVVGIDT 131 A GADKISI S A+ ++ +FG Q +V+ +D Sbjct: 407 AVDIAHLYFQSGADKISIGSDAVIIAENYYANNQIPLGTSSIETISSKFGNQAVVISVDP 466 Query: 132 W----------------------YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 G+ + + ++ + L+ +K Sbjct: 467 KRKYIKNPQLDTTMETIKIIDPLQYGPNGEQYCYYQVTSQGGRKLHELGALELCLACEKL 526 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR-DADVDGA 228 GAGEI+LN ++ DG G++L+ L++++ +P+IAS GAG +HF + F D +D A Sbjct: 527 GAGEILLNSIDNDGSNKGFNLQLLQQIKSHVSIPVIASSGAGNPQHFQQVFEMDCGIDAA 586 Query: 229 LAASVFHKQIINIGELKAYLATQ-GVEIRI 257 L A +FH+ + E+K YL + +++R+ Sbjct: 587 LGAGIFHRGEYTVNEVKKYLQQEAKMDVRL 616 >UniRef50_A5INE5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Thermotogaceae RepID=HIS4_THEP1 Length = 241 Score = 147 bits (372), Expect = 3e-34, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 102/254 (40%), Gaps = 21/254 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++P +D+ G+V + V+ + D L K+ EEG + D++ + + V Sbjct: 1 MLVVPAIDLFRGKVARMVKGKKENTIFYEKDPAELVKKLIEEGFTLIHVVDLSKAIENSV 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + R++E + + GGI+S + A ++ G + ++S L DP+ + L Sbjct: 61 ENFPVLERLSEFAE-HIQIGGGIRSFDYAERLRKLGYKRQIVSSKVLEDPSFLKFLK--- 116 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + + + + + ++ +++ G EIV + Sbjct: 117 ---------EIDVEPVFSLDTRGGKVAFKGWLAEEEIDPISLLKRLKEYGLEEIVHTEIE 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAG---TMEHFLEAFRDAD--VDGALAASVFH 235 +DG +D +K+ V + A+GG +++ R+ + + G + F Sbjct: 168 KDGTLQEHDFSLTRKIAIEAEVNVFAAGGISSENSLKTAQRVHRETNGLLKGVIVGRAFL 227 Query: 236 KQIINIGELKAYLA 249 + I+ + +K Y Sbjct: 228 EGILTVEVMKRYAR 241 >UniRef50_D2NNQ2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide isomerase n=2 Tax=Rothia mucilaginosa RepID=D2NNQ2_9MICC Length = 262 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 99/262 (37%), Gaps = 21/262 (8%) Query: 5 RIIPCLDVRDGQVVKGVQF--RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 ++P +D+ +G V+ V E D V A + + GA + D+ + GR + Sbjct: 7 ELLPAVDISEGYAVRPVGGTLSGGEQRLDPVEAALTWVKAGARWIHLVDLDLAF-GRGTN 65 Query: 63 KSWVSRVAEVI-----------DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 ++ V + + V+GG+++ E + LS D++++ S ALAD + Sbjct: 66 TEVLAEVVAAVRAENARMTGSAPVRIQVSGGVRNPESLERALSLNPDRVNVTSAALADSS 125 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + R+ ++ + + T + + + ++ G Sbjct: 126 WLEGTLARYADSDLLALG-----LDARYTPERGWVTVARGTDWSGPGVAEALAWLEGAGV 180 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGAL 229 ++ +++DG G E L V P++ASGG ++ ++ + ++G + Sbjct: 181 RRYIVTDVSKDGSLAGPGAELLDVVLAQTDRPVVASGGVASLADLVKLRSMVPSGLEGVV 240 Query: 230 AASVFHKQIINIGELKAYLATQ 251 + + + ++ Sbjct: 241 LGKALYVGNFSFEQALEIAGSR 262 >UniRef50_A1WSE3 Histidine biosynthesis n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WSE3_VEREI Length = 229 Score = 146 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 119/218 (54%), Gaps = 6/218 (2%) Query: 39 YAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD 98 Y +GADELVF DI AS R + R A+ I +P V GGI+SL D +L GAD Sbjct: 17 YYSQGADELVFMDIVASLYQRNNLAGIIERAADQIYVPITVGGGIRSLHDVRTMLCSGAD 76 Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 K++IN+ A+A P LI +++RFG QC+V+ ++ + G ++ T + Sbjct: 77 KVAINTAAVARPGLIAEVSERFGSQCMVLSVEAKRKSGGGWEAF-----VDNGREHTGLD 131 Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + WV++ GAGEI+L ++Q+G R G+D++ ++ V VP+IASGG G + Sbjct: 132 VVAWVRQAVALGAGEIMLTSVDQEGTRKGFDVDLVRTVAGCVTVPIIASGGYGRPSDLQQ 191 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 A +A G A H Q I ELKA+ G+E+R Sbjct: 192 A-AEAGASGLAIADALHWQRATIAELKAHARAAGLEVR 228 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D+V ++ GA E++ + + D V VA + +P +GG D Sbjct: 131 DVVAWVRQAVALGAGEIMLTSVDQEGTRKGFDVDLVRTVAGCVTVPIIASGGYGRPSDLQ 190 Query: 91 KILSFGADKISINSPALADPTLITRLA 117 + GA ++I I L Sbjct: 191 QAAEAGASGLAIADALHWQRATIAELK 217 >UniRef50_Q1N2Y7 HisF protein n=1 Tax=Bermanella marisrubri RepID=Q1N2Y7_9GAMM Length = 223 Score = 146 bits (369), Expect = 7e-34, Method: Composition-based stats. Identities = 67/230 (29%), Positives = 120/230 (52%), Gaps = 8/230 (3%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 +GD + K ++ ADE+V DI A+ R ++ + R++ +P + GG+ +LED Sbjct: 2 VGDAITNVKVFSSRKADEMVIVDIEATEKKR-INLPLLKRLSSHCIMPLTIGGGVTTLED 60 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + S GADK+ +NS P ++T ++ +FG Q +V +D + Sbjct: 61 AEDLFSVGADKVLVNSAFYNRPEILTDISSKFGRQAVVFSLDVMKKSNEYVPVSK----- 115 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 + + W + V+ + GAGEI+LN ++ DG+ G+DL K+V ++ VP++ +G Sbjct: 116 -NGSVKQSWTLRETVERAIEYGAGEIILNSVDCDGMMQGFDLNLCKQVSDISSVPVVIAG 174 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC 258 G GT E + A ++ D A S+F+ +I +K Y+ G+E+R+ Sbjct: 175 GCGTKEDCVLAV-NSGADAVAAGSIFYWVGESILTIKDYMNKNGLEVRLL 223 >UniRef50_A8A8V9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8V9_IGNH4 Length = 235 Score = 146 bits (368), Expect = 8e-34, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 19/247 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 R+ P +DV +G+ VK V+ +GD V A+ +A EGA L D+ + G+ + Sbjct: 1 MRVFPSIDVSEGRAVKRVRGVKGTGLDLGDPVKWAEFWALEGAKGLHVVDLDGAEAGKPI 60 Query: 62 DKSWVSRV---AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + +++V A+ + VAGG++ +E + AD I S A DP + ++ Sbjct: 61 NVEVINKVIEKAKEYGLWVQVAGGLREVEHLERYPK--ADAFVIGSRAHKDPEFLEVASE 118 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 G ++V ID E + +++ + R + Sbjct: 119 AVGADKVIVAIDL----------KGGKVSVEGWKEEIPVGLKEALEKFKGRSFRGFLYTY 168 Query: 179 MNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 ++ +G G D+ +K + RE L +GG G+ EH + A D + + Sbjct: 169 VDTEGTMEGPDVSGVKYIRREYPDKLLEYAGGVGSPEHV-KLLESAGADVVVLGMALYSG 227 Query: 238 IINIGEL 244 + + +L Sbjct: 228 KLRLKDL 234 Score = 46.8 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 37/116 (31%), Gaps = 6/116 (5%) Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV---REVCH 201 T + + + W + GA + + ++ ++E + KV + Sbjct: 17 RVRGVKGTGLDLGDPVKWAEFWALEGAKGLHVVDLDGAEAGKPINVEVINKVIEKAKEYG 76 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + + +GG +EH D + S HK + + V + I Sbjct: 77 LWVQVAGGLREVEHLER---YPKADAFVIGSRAHKDPEFLEVASEAVGADKVIVAI 129 >UniRef50_Q5KNA0 Imidazoleglycerol phosphate synthase, putative n=3 Tax=Basidiomycota RepID=Q5KNA0_CRYNE Length = 619 Score = 146 bits (368), Expect = 9e-34, Method: Composition-based stats. Identities = 89/331 (26%), Positives = 134/331 (40%), Gaps = 76/331 (22%) Query: 2 LAKRIIPCLDVRDG-----QVVKGVQFRNHEIIGD--------IVPLAKRYAEEGADELV 48 L RI+ CLDVR V KG Q+ E D V LA+RY GADE+ Sbjct: 282 LTNRIVACLDVRSNDAGDLVVTKGDQYDVREKSSDKAVRNLGKPVELAQRYYLSGADEVA 341 Query: 49 FYDITASSDGRVVD---KSWVSRVAEVIDIPFCVAGGIKS-----------LEDAAKILS 94 F +IT+ ++D V AE + +P + GGIK LE A Sbjct: 342 FLNITSFRSSALLDQPMLDVVRAAAETVFVPLTIGGGIKDTTDPDGTFHPALEVAGAYFR 401 Query: 95 FGADKISINSPALADPTLITR-----------------LADRFGVQCIVVGIDTWYDAET 137 GADK+SI S A+ + ++ +G Q +VV ID Sbjct: 402 SGADKVSIGSEAVIAVEEMLEREARGEPALTGKTGIETISKGYGRQAVVVSIDPKRVYVD 461 Query: 138 --------------------------------GKYHVNQYTGDESRTRVTQWETLDWVQE 165 V + + Q Sbjct: 462 TSAPGWLESFPAKHRASLIIGDNATSRTAPQEKGKAWWYQCTISGGRAVRDIDVVQLAQG 521 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 V++ GAGEI+LN +++DG G+DL+ +K V+ +P+++S GAG+ F E FR+ Sbjct: 522 VERLGAGEILLNSVDRDGSGQGFDLDLVKLVKNAVGIPVVSSSGAGSPADFEEVFRETGT 581 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIR 256 + ALAA +FH+ + I E+K +L + + +R Sbjct: 582 EAALAAGIFHRGEVGIDEVKGWLEGKEMAVR 612 >UniRef50_Q2N6D2 Imidazoleglycerol-phosphate synthase, cyclase subunit n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2N6D2_ERYLH Length = 264 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 6/220 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M RIIP L + VK QF+ IGDIV A+ + + ADEL+ DI Sbjct: 1 MRRLRIIPVLLLDGTSAVKTHQFKPARYIGDIVNAAQIFNSKMADELIVVDI-GYHQDNP 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +AE +P GGI S+++AA + G +K+SIN+ + L+ A +F Sbjct: 60 SRPEVIRHLAEECFMPLAFGGGISSVDEAAALFKDGIEKVSINTAFVEGGALVEEAARQF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +V ID +A+ TR + ++ + + +GAGEI++ ++ Sbjct: 120 GSQSVVASIDARREADGSYQ-----VYSRGGTRALGIDPVEMARRAEAQGAGEILIQSID 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 +DG+R GYD ++ + + +P++A GGA T++ + Sbjct: 175 RDGMRKGYDRNLVRSIVDATTLPVVALGGADTVDDLAQVI 214 >UniRef50_C9YDK8 Imidazole glycerol phosphate synthase subunit hisF n=2 Tax=Bacteria RepID=C9YDK8_9BURK Length = 286 Score = 144 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 92/256 (35%), Positives = 134/256 (52%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IP L + +VKGV F + +G ++P K Y + DELV DI A G Sbjct: 27 MLKVRVIPTLLWKHFGLVKGVGFNSWRRVGPVLPAIKVYNQREVDELVLVDILAHGRGEE 86 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + + +P V GGI +E ++L GADK+S+N+ A A P L++ +A R Sbjct: 87 PDYESIHEFGQDCFVPLTVGGGITHIEQVQRLLRVGADKVSLNTAAYARPELVSDIARRH 146 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 GVQC+V ID A G + T+ T + + W +E++ RGAGEI++ ++ Sbjct: 147 GVQCVVASIDVRPRAGGGWD-----CFSHAGTQPTGRDVVAWARELEDRGAGEILVTSID 201 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG GYDL + V + +P+IASGGAG +H ++A A AAS+FH + Sbjct: 202 LDGSMRGYDLALVAAVAQAVKIPVIASGGAGNYQHMVDAVVQAGAAAVAAASIFHFTEMT 261 Query: 241 IGELKAYLATQGVEIR 256 KA LA GV +R Sbjct: 262 PAGAKAALAEAGVPVR 277 >UniRef50_A2BSD9 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus str. AS9601 RepID=A2BSD9_PROMS Length = 254 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 8/241 (3%) Query: 1 MLA-KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDG 58 M R+I L + +++K +F+N++ +GD + + + + + DE+ Sbjct: 1 MKKHPRVILSLIIDSKRMIKRSKFKNYKYLGDPLNIIRIFNSKRVDEISIISCENYEKKD 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 +D ++ +++ P +GG++SLEDA K+ S G +KI I + +P +I ++A+ Sbjct: 61 INIDFEFLEKISGEAFCPLTYSGGVRSLEDADKLFSIGFEKIGIRNLLHTNPEVIKQIAE 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 ++G Q +V+ ID YT S + T+ L++++ + GAGE+VL Sbjct: 121 KYGSQSVVIFIDYKELNNNEI---EIYTSYNSFFKSTKSSILEFIKNAESYGAGEVVLQS 177 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS--VFHK 236 + ++G G DL+ +K++ +P+I+S G + +AF DG +A+ + Sbjct: 178 ILREGQSKGLDLDIIKEITNKTILPIISSCGMRDLSDARKAF-SLGADGVMASKFFSLYG 236 Query: 237 Q 237 Sbjct: 237 N 237 >UniRef50_Q2YZ70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=60 Tax=Staphylococcus RepID=HIS4_STAAB Length = 234 Score = 140 bits (353), Expect = 5e-32, Method: Composition-based stats. Identities = 31/241 (12%), Positives = 79/241 (32%), Gaps = 24/241 (9%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAE--------EGADELVFYDITAS 55 + P +D+ V+ + + +++ E E + + D+ + Sbjct: 2 IELWPAIDLIGSTSVRLTEGKYDSE----EKMSRSAEESIAYYSQFECVNRIHIVDLIGA 57 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + ++ + + V GGI++ + G + + + + D + Sbjct: 58 KAQHAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYCIVGTKGIQDTDWLKE 117 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 +A F + + T+ +V+++ G I+ Sbjct: 118 MAHTFPGRI-----------YFSVDAYGEDIKVNGWEEDTELNLFSFVKQLSDIPLGGII 166 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + +DG +G + E ++ + +P+IASGG + +V A+ H Sbjct: 167 YTHIAKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQR-LASLNVHAAIIGKAAH 225 Query: 236 K 236 + Sbjct: 226 Q 226 >UniRef50_B6BR00 Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BR00_9RICK Length = 254 Score = 139 bits (351), Expect = 9e-32, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 10/257 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNH-EIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 ML RII + +VKG +F N G + K Y DE++F+DI+ + + Sbjct: 1 MLKARIITTMLWNGSTLVKGNKFENEKRSAGSPLTTVKIYNSRDVDEILFFDISR--NNK 58 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 ++DK ++ + + + +P + GGI+ + + +GADK++INS +P +I + R Sbjct: 59 IIDKDFILSITDCVSVPITIGGGIEKISQMNDLFEYGADKVAINSIIYKNPNIIDEASKR 118 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FG Q I V ID + + + + + D + E RGAGEIV+N + Sbjct: 119 FGSQAITVSIDVRKNNQN------YECYYDLGKIKSDRKLNDLLVECVNRGAGEIVINCI 172 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 N DG+ GYD E +++ + ++P++ASGGAG+ EHF EA+++ D AAS++H Sbjct: 173 NNDGLMKGYDNELIQQTSSLANIPIVASGGAGSYEHFYEAYKN-GADAFAAASIYHFTEH 231 Query: 240 NIGELKAYLATQGVEIR 256 + K YL + V IR Sbjct: 232 TPAKAKKYLLKKKVPIR 248 Score = 51.0 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 3/100 (3%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 L V+ R EI+ ++++ D + + + + VP+ GG + Sbjct: 32 SPLTTVKIYNSRDVDEILFFDISRNNKI--IDKDFILSITDCVSVPITIGGGIEKISQMN 89 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + F D S+ +K I E +Q + + I Sbjct: 90 DLFEY-GADKVAINSIIYKNPNIIDEASKRFGSQAITVSI 128 >UniRef50_B8LDL7 N-acetyl-glutamate-gamma-semialdehyde dehydrogenase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDL7_THAPS Length = 570 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 87/325 (26%), Positives = 136/325 (41%), Gaps = 69/325 (21%) Query: 2 LAKRIIPCLDVRDG-----QVVKGVQFR--------------NHEIIGDIVPLAKRYAEE 42 L KR++ LDVR V KG Q+ +G V LA RY +E Sbjct: 244 LVKRVVVALDVRSNDHGDLVVTKGDQYDVRENEKEGVQEGRGGVRNLGKPVSLASRYYKE 303 Query: 43 GADELVFYDITASSDGRVVDKSWV---SRVAEVIDIPFCVAGGIKSLED----------- 88 GADE+ F +IT+ G + D + ++ I +P V GGI+S ED Sbjct: 304 GADEIAFLNITSFRSGVIEDMPMLQVLEEASKEIFVPLTVGGGIRSYEDPGTGKVYSALE 363 Query: 89 -AAKILSFGADKISINSPALADPTLI-------------TRLADRFGVQCIVVGIDTW-- 132 A++ GADK+SI S ++ ++ +GVQ +V+ ID Sbjct: 364 VASRYFRAGADKVSIGSDSVHAAEEYIASGNTKTGQTSIETISHVYGVQAVVISIDPKRV 423 Query: 133 --------------------YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 G+ + + + + + GAG Sbjct: 424 YVTSPDAADSKHTVVTLDDSQKGPNGEQYCWYQCTVKGGREARDICAVSVAKAAEALGAG 483 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 EI+LN ++ DG NG+D +K V + +P+IAS GAG HF + F + V ALAA Sbjct: 484 EIMLNCIDMDGQCNGFDHALMKAVSDAVTIPVIASSGAGKESHFSDVFSETSVQAALAAG 543 Query: 233 VFHKQIINIGELKAYLATQGVEIRI 257 +FH++ + I ++K ++ G+ RI Sbjct: 544 MFHRKEVEIADVKKHMEKMGIRARI 568 Score = 41.8 bits (97), Expect = 0.023, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 51/172 (29%), Gaps = 21/172 (12%) Query: 82 GIKSLEDAAKILSFGADKISINSPALA-DPTLITRLADRFGVQCIVVGIDTWY------D 134 G+ L L AD N+ L D + T L R V V D D Sbjct: 209 GVTGLNFIRGFLDSVADGTLSNTQPLEVDGSKHTELVKRVVVALDVRSNDHGDLVVTKGD 268 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN--QDGV-RNGYDLE 191 + + + + + + K GA EI + + GV + L+ Sbjct: 269 QYDVRENEKEGVQEGRGGVRNLGKPVSLASRYYKEGADEIAFLNITSFRSGVIEDMPMLQ 328 Query: 192 QLKKVREVCHVPLIASGGAGTMEH-----FLEAFR------DADVDGALAAS 232 L++ + VPL GG + E A A D S Sbjct: 329 VLEEASKEIFVPLTVGGGIRSYEDPGTGKVYSALEVASRYFRAGADKVSIGS 380 >UniRef50_A6Y2G9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 2 n=4 Tax=Vibrio RepID=A6Y2G9_VIBCH Length = 262 Score = 137 bits (345), Expect = 4e-31, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQF--------RNHEIIGDIVPLAKRYAEEGADELVFYDI 52 M ++ P +D+ G+ + +G++ +A+ + + GA + D+ Sbjct: 1 MEEFKLYPSIDIVGGKALTSRSAIDITLGITEEKTYLGEVFEVAELHFQSGAKWIHIVDL 60 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFC--VAGGIKSLEDAAKILSFGADKISINSPALADP 110 A+ G ++ + + + V GGI+S E + + G +++I+S P Sbjct: 61 DAA-SGVGSNQRLIMDLVKHFSEKVQTQVCGGIRSNEILEQYILAGCSRVNISSMIFDKP 119 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 L +L ++G + + A K +Y Q + + G Sbjct: 120 KLCEKLLKKYGEKIAI--------ALDVKLVNQEYKLATRGWNTLQGNLWTTLDWLDNSG 171 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 VL +++ G N + L++V P+I+ GG +++ ++GA+ Sbjct: 172 CQRYVLTDVDRGGSLNHPNFSLLEQVLTKTSTPIISGGGLCSLDDIDR-LYQIGIEGAVL 230 Query: 231 ASVFHKQIINIGELKAYLATQ 251 + H Q + Y+ Sbjct: 231 GQLIHTQQHQLKRFLQYVQQN 251 >UniRef50_Q01ZU7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZU7_SOLUE Length = 227 Score = 136 bits (344), Expect = 5e-31, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 101/241 (41%), Gaps = 19/241 (7%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGD-IVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 I+PC+D+ DG+VV+ +Q R + GD + +R+ G E+ D+ A+ G+ + + Sbjct: 2 IVPCIDLMDGKVVQLIQGREKALEGDSPDEMLRRF--AGFPEIQVIDLDAAL-GKGSNDT 58 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 V +A GG+++L+ A +LS GA ++ + + A + + Sbjct: 59 LVKMLASKAVCRV--GGGVRTLDRANTLLSQGAHRVIVGTSAFTKGGINVPFLETLDPAT 116 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 +V +D + T++ + + ++ + ++++G+ Sbjct: 117 TIVALD----------SKGGRIVVKGWQEATEFTAEEVLHSLEPY-CSGFLCTYVDKEGM 165 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 G DL+ ++R + A+GG T+E ++ A + +++ EL Sbjct: 166 MQGTDLDWFARLRAATAHEITAAGGITTLEDIKALL-AMNIHTA-VGMAIYTGRLDLEEL 223 Query: 245 K 245 + Sbjct: 224 R 224 >UniRef50_Q062W6 Putative cyclase hisF n=1 Tax=Synechococcus sp. BL107 RepID=Q062W6_9SYNE Length = 255 Score = 136 bits (343), Expect = 8e-31, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 11/261 (4%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYA----EEGADELVFYDITASS 56 M KR+I L + G F + IG++ L Y DELV D++ Sbjct: 1 MAKKRLIFTLLYQKGGFYLSRNF-RLQKIGNLSWLKINYNFYSVACAIDELVILDVSREK 59 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 R V+ V + +P + G I SL+DA ++ GADK+ IN+ +P L+ L Sbjct: 60 PDRQEFCEVVNEVCQNCFMPLALGGHINSLDDAKMLIYNGADKLIINTALHENPNLVREL 119 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 +G QCI+ +D + + + + ++ + + G GE+ L Sbjct: 120 IAIYGSQCIIGSVDYKIEEGS------FIVYTNQGKKRLDRPLNEHIERLGEMGVGELYL 173 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 N +++DG GY E LK++ H+P+I +GGAG H E+ VD A++ + Sbjct: 174 NSIDRDGTGQGYVSEVLKQLDSASHLPIIQAGGAGNKHHLQESLECRGVDAVATANLLNF 233 Query: 237 QIINIGELKAYLATQGVEIRI 257 + + + +L +G+ + I Sbjct: 234 VGDGLPKAREFLINKGISMAI 254 >UniRef50_A9NE09 tRNA-dihydrouridine synthase n=2 Tax=Mollicutes RepID=A9NE09_ACHLI Length = 336 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 4/182 (2%) Query: 78 CVAGGIKSLEDAAKILS--FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 ++++ +AA + D I IN P + + I A Sbjct: 73 IFGSDLETMVEAAMFIDKNSNCDFIDINMGCPV-PKVAIGAQAGASLMKDPQKIYDIVKA 131 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 K S ++ + ++K GA I ++ + +G DL+ +K Sbjct: 132 IKEKVSKPVTVKIRSGWDSESVNAVEVAKMIEKAGASLITVHARTRAQGYSGEPDLDVIK 191 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 V+E +P+I +G + D + E+ AYL + Sbjct: 192 AVKEAVSIPVIGNGNIVDGKSAKHMLEYTGCDAVMIGRASLGNPWIFREINAYLNGEETP 251 Query: 255 IR 256 +R Sbjct: 252 VR 253 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + E + + V +AK + GA + + T + D + V E + IP Sbjct: 142 VKIRSGWDSESV-NAVEVAKMIEKAGASLITVHARTRAQGYSGEPDLDVIKAVKEAVSIP 200 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 G I + A +L G D + I +L +P + + Sbjct: 201 VIGNGNIVDGKSAKHMLEYTGCDAVMIGRASLGNPWIFREI 241 >UniRef50_C2G0W0 Possible imidazoleglycerol-phosphate synthase HisF n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G0W0_9SPHI Length = 263 Score = 133 bits (336), Expect = 5e-30, Method: Composition-based stats. Identities = 78/258 (30%), Positives = 124/258 (48%), Gaps = 11/258 (4%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA----DELVFYDITASS 56 ML KR+I L DG ++ F + +GDI L K Y DELV +++ S Sbjct: 1 MLRKRVIFTLLYCDGFFMQSRNF-RLQKVGDINWLEKFYKFNKIAFSLDELVILNVSRKS 59 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + VSR+ E +P V GGI+SLEDA + GADKI +N+ +DP L+ + Sbjct: 60 KNQEEFGRTVSRLVEGTYMPVAVGGGIRSLEDAEMLFKSGADKIVLNTSLSSDPDLVKLI 119 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 ++G Q +V ID E+ E+ + +++ ++ GE+ L Sbjct: 120 VQKYGSQSVVASIDYLKKGESS------EIFIENGSLNINEGFENYLSHLKDLNVGEVYL 173 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 N M +DG GYD +K V+ + +VPLI +GGAG H EA +++ A A++F+ Sbjct: 174 NSMERDGTGFGYDFSLVKLVKSILNVPLIIAGGAGNEGHLKEALLHSEISAAATANLFNF 233 Query: 237 QIINIGELKAYLATQGVE 254 + + + +L G Sbjct: 234 IGDGLPKARFFLINSGEN 251 >UniRef50_Q7WYR2 Imidazole glycerol phosphate synthase, subunit HisF2 n=3 Tax=Rhizobium RepID=Q7WYR2_RHIL3 Length = 251 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 11/220 (5%) Query: 2 LAKRIIPCLDVRDGQ-VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + KR+IP L V + +VK ++F +GD + + + E+ DE+ DI A+ GR Sbjct: 1 MRKRLIPVLLVDQKRRLVKTIEFGERTYVGDPFNVVRLFNEKEVDEICILDIDATRTGRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D +V +A +P GGI L+ ++ G +K + A + L+ +A Sbjct: 61 PDLGFVRELATECFMPLAYGGGITELKQCEELNRSGVEKFVLGQGA-RNSQLVGAIAADM 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +V +D + + E +++ +Q G GEI+L Sbjct: 120 GSQALVACVD---------VDGRGAAASCYASSGARQEPIEFCLRLQDAGVGEIILQSKT 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 DG RNGYDLE ++ + +P++A GGAG + H +E Sbjct: 171 LDGTRNGYDLELIQSITRKLSIPVVALGGAGDVAHLMEGL 210 >UniRef50_C0WXE8 Imidazole glycerol phosphate synthase n=2 Tax=Lactobacillus fermentum RepID=C0WXE8_LACFE Length = 188 Score = 130 bits (328), Expect = 4e-29, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%) Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V +++ + +P V ++++ + +L GADK+ I++ ++ P I ++A FG Sbjct: 2 LDMVEAISQQVFMPMTVVCNVRTVVEVRNLLLAGADKVGISTRSIMAPDFIPKVAQVFGN 61 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 Q IV +D D T+ + +W V + G GE+++N M++D Sbjct: 62 QSIVAILDYHVDP-------RTNRKIVCTPGNTELDAYEWTLRVVELGVGELLVNSMDRD 114 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G NG+D + + +P++ASGGAG+ F E F ++ V GA+AAS FH + I Sbjct: 115 GTENGFDTAFYRDLTTTLTIPVVASGGAGSTVDFEEVFVNSGVTGAMAASAFHLDQMTIS 174 Query: 243 ELKAYLATQGVEIR 256 E+K L +G+ +R Sbjct: 175 EVKETLLEKGILVR 188 >UniRef50_D2RLJ7 TIM-barrel protein, nifR3 family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLJ7_ACIFE Length = 331 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 66/222 (29%), Gaps = 7/222 (3%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKIL 93 E GAD V A + + + + G + ++ A + Sbjct: 35 ICRELGADYTVSEMVSAKALLFKNPKTFAMLEVDPREHPVAIQLFGSVPEELVKGAKIVA 94 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GAD I N + A + Sbjct: 95 EHGADIIDFNMGCPVHKIVANGEGSALMKDP--ERAYACLAALVDAVDRPVTVKFRAGWD 152 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 ++ + +K G + ++ + +G D + +++V+E +P++ +G T Sbjct: 153 EDHRNAVEIARLAEKAGVAAVAVHGRTRGQFYSGKADWDIIRQVKEAVSIPVLGNGDVFT 212 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + L+ DG + A E++A LA + + Sbjct: 213 AQDALDLLAATHCDGVMIARGAQGNPWIFREVQAVLAGKTIP 254 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + V +A+ + G + + T D + +V E + IP Sbjct: 145 VKFRAGWDE-DHRNAVEIARLAEKAGVAAVAVHGRTRGQFYSGKADWDIIRQVKEAVSIP 203 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRL 116 G + + +DA +L+ D + I A +P + + Sbjct: 204 VLGNGDVFTAQDALDLLAATHCDGVMIARGAQGNPWIFREV 244 >UniRef50_D1BLD4 TIM-barrel protein, nifR3 family n=12 Tax=cellular organisms RepID=D1BLD4_VEIPT Length = 328 Score = 130 bits (327), Expect = 5e-29, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 64/225 (28%), Gaps = 15/225 (6%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSW--VSRVAEVIDIPFCVAGGIKSLED----A 89 E GA + + V + + + E A Sbjct: 33 LAKEHGAALVCTEMVSAMGIKYKNERTHELLRIEDVERPVSMQIFG----SNPEAIALGA 88 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + + GAD + IN + + +A V Sbjct: 89 KVVANAGADIVDINMGCPVKKVVTSGDGSALMKNP--DLAARVAEAAVEAVDVPVTVKMR 146 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASG 208 +D+ + ++ G I ++ ++ + +G+ D +K V+E VP++ +G Sbjct: 147 IGWDSDSINVVDFAKRIESTGVAAIAVHGRTKEQMYSGHADWSYIKAVKEAVSVPVLGNG 206 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 E + + D + G + YLAT V Sbjct: 207 DIVEPEDAKQMLDETGCDAVMVGRGAQGNPWIFGRIHHYLATGEV 251 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 3/134 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + ++V AKR G + + T D S++ V E + +P Sbjct: 143 VKMRIGWD-SDSINVVDFAKRIESTGVAAIAVHGRTKEQMYSGHADWSYIKAVKEAVSVP 201 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I EDA ++L G D + + A +P + R+ ++ G Sbjct: 202 VLGNGDIVEPEDAKQMLDETGCDAVMVGRGAQGNPWIFGRIHHYLATGEVLPGPTDIERL 261 Query: 136 ETGKYHVNQYTGDE 149 + H + + Sbjct: 262 DMLLKHFDLLCQYK 275 >UniRef50_Q2RZL4 NifR3 family enzyme n=2 Tax=Rhodothermaceae RepID=Q2RZL4_SALRD Length = 443 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 71/237 (29%), Gaps = 14/237 (5%) Query: 27 EIIGDI--VPLAKRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCV-AG 81 E + D L KRY GAD + F + + + E I V G Sbjct: 83 EDVSDPPFRILCKRY---GADMMYTEFVSSAGLLREQEHEHQKLEIFDEERPIGIQVWGG 139 Query: 82 GIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 GI + +A ++ G D I IN + + A + Sbjct: 140 GIDEVRNATPMVDAAGPDVIDINFGCPVRKIVQKDGGAGVLRNL--DKMRNITAAVMEEA 197 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV 199 +D + ++ G + ++ ++ G E L+ ++E Sbjct: 198 TRPVTVKTRLGWDDDSIHIVDVARMLEDMGVAALTVHARTREQKYKGDARWEWLRTIKEE 257 Query: 200 C--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +P I +G A E F + VDG + K Y+ T + Sbjct: 258 GTRDMPFIGNGDALDPEAIEAMFEETGVDGVMLGRGALGNPWIFERAKTYMETGELP 314 Score = 98.4 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 48/159 (30%), Gaps = 8/159 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI--D 74 VK + IV +A+ + G L + T + W+ + E D Sbjct: 203 VKTRLGWDD-DSIHIVDVARMLEDMGVAALTVHARTREQKYKGDARWEWLRTIKEEGTRD 261 Query: 75 IPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 +PF G E + G D + + AL +P + R + D Sbjct: 262 MPFIGNGDALDPEAIEAMFEETGVDGVMLGRGALGNPWIFERAKTYMETGELPPPPDWEE 321 Query: 134 DAETGKYH---VNQYTGDESRTRVTQWETLDWVQEVQKR 169 + H ++ G+ + + + + + Sbjct: 322 RVQVVAEHLSLKCEWLGERTGVMEMRKNYSSYFKGFRNA 360 >UniRef50_A9A4W7 Putative TIM-barrel protein, nifR3 family n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A4W7_NITMS Length = 320 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 79/234 (33%), Gaps = 17/234 (7%) Query: 29 IGDIVPLAKRYA--EEGADELV-----FYDITASSDGRVVDKSWVSRVAE----VIDIPF 77 + D A R + GA +V + I A + + + E I Sbjct: 17 VSDP---ALRLQCKKMGAGLVVTEFTSIHSIIAKEEQLKENMKTIQEFIEFSEQERPISV 73 Query: 78 CVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 + G + +LE AA I+ D I N A P + ++A +Q + + + Sbjct: 74 QLFGSDLYALEKAATIVEPYFDIIDYNMGCPA-PHITQQMAGGALLQEVNLTQQIFETLV 132 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKK 195 T +++ D + + +G I + +G D + +K+ Sbjct: 133 NAVKKPVTLKIRSGVTDASKFLFRDIAEIAEDQGIQMITFHPRTVSQGYSGSADWKLIKE 192 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 ++E+ ++P++ +G T E + D + ++ YL Sbjct: 193 LKEISNIPVVGNGDITTPEDAKMMLDETGCDYVMIGRGAMGNPFLFEQINDYLK 246 Score = 96.5 bits (239), Expect = 7e-19, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 2/107 (1%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 V+ +K +A+ ++G + F+ T S D + + Sbjct: 135 VKKPVTLKIRSGVTDASKFLFRDIAEIAEDQGIQMITFHPRTVSQGYSGSADWKLIKELK 194 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 E+ +IP G I + EDA +L G D + I A+ +P L ++ Sbjct: 195 EISNIPVVGNGDITTPEDAKMMLDETGCDYVMIGRGAMGNPFLFEQI 241 >UniRef50_C6JNK3 Dihydrouridine-tRNA ligase n=4 Tax=Fusobacterium RepID=C6JNK3_FUSVA Length = 320 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 2/192 (1%) Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + R+ E + K +E A + S G I INS + Sbjct: 47 LKVILRLREGDSVQLFGKDIKKMVESAKFVESLGVKHIDINSGCPMKKIVNNGYGAALME 106 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 Q +V + + + ++ + Q+ G I ++ ++ Sbjct: 107 QPELVKAMLSEVRSALNDKTDLSIKIRVGYKES-KNPVEIAKIAQETGCKHITIHGRTRE 165 Query: 183 GVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 + G D +K+V+E +P+I +G T E E + VDG + A I Sbjct: 166 QMYTGKADWSIIKEVKESVDIPVIGNGDIFTAEDAKERVDYSGVDGIMLARGIFGNPWLI 225 Query: 242 GELKAYLATQGV 253 +++ Y + Sbjct: 226 RDIREYFEYGKI 237 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 4/128 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 +K + V +AK E G + + T D S + V E +DIP Sbjct: 130 IKIRVGYKE--SKNPVEIAKIAQETGCKHITIHGRTREQMYTGKADWSIIKEVKESVDIP 187 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I + EDA + + G D I + +P LI + + F I+ + Sbjct: 188 VIGNGDIFTAEDAKERVDYSGVDGIMLARGIFGNPWLIRDIREYFEYGKILHPVTDIEKI 247 Query: 136 ETGKYHVN 143 + H Sbjct: 248 DMAIKHTK 255 >UniRef50_A4YI32 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YI32_METS5 Length = 228 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 87/236 (36%), Gaps = 18/236 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +++P +D+ G VK V+ R ++GD + +A+ G + D+ A+ +G+ Sbjct: 1 MKVVPSIDISKGMAVKRVRGREGTGLVLGDPLKIAEELRNMGYTSVHLVDLDAA-EGKGD 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + RV + V GGI+ + LS GA K+ +++ A P R+ + Sbjct: 60 NVEVIERVMKDFS-EISVGGGIRDRSRLERFLSSGATKVVMSTLAFTKPDTFRRVVAGYE 118 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + +V + + + V G ++ + Sbjct: 119 NRVLVSVDYCERKVLIK------------GWNESAMSFEEAISHVNSLGVRGVIFTYVCN 166 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +G RNG D E + + + +GG G+++ E A+ + Sbjct: 167 EGTRNGIDPE-IGRYVNLVQGEKGYAGGIGSIQDLQE-LDKMGFHFAIVGMSLYAG 220 >UniRef50_Q8ZY14 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Thermoproteaceae RepID=HIS4_PYRAE Length = 229 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 90/237 (37%), Gaps = 19/237 (8%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 IIP +D+ G+ VK ++ + I GD + LA R+ + A + D+ + G +V+ Sbjct: 2 IIPSIDIEGGRAVKRIRGQRGNYIFQGDPLELAARFRK--APLVHVVDLDGAEAGGLVNI 59 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 S +S++AE+++ + GG++SLE + LS + S + L R A+ + + Sbjct: 60 SVISKIAEILEGRCELGGGLRSLEAVERALSL-CQYAVVGSLPFKNWPLFRRAAELYRDR 118 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA-GEIVLNMMNQD 182 V R + V+ +++ G +++ + + Sbjct: 119 LAVSL------------DYRGGEVLVGGWREKAASIAEAVRRLEEAGPYAAVIVTSVEVE 166 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 G G + K + + +GG A DG + + + Sbjct: 167 GTGGGVKADIDVKSLKRIARRVFYAGGVRDCNDVERA-YALGFDGVIVGYALYAGDL 222 >UniRef50_UPI000038E352 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E352 Length = 229 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 92/244 (37%), Gaps = 27/244 (11%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAE-EGADELVFYDITASSDGRVVD 62 I P +D+ +G+ V + + GD V A+ ++ G +L D+ + G + Sbjct: 4 IYPAIDIYNGEAVSLENGKIEKIESFGDPVKFAQEFSSISG--KLHIVDLNGAFTGNPAN 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + + + + GG +++E S G D I I + +L D ++ ++++ Sbjct: 62 TNLIKNIRKNVKSFMQAGGGYRTMESIEAGYSLGIDSIIIGTASL-DKKILEEVSEKHKN 120 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 I N Y T+ D+ V+ R A + +N D Sbjct: 121 ITI------------SIDAYNGYIKYNGWADGTEISYRDFYSMVKGR-ANRFIFTAINSD 167 Query: 183 GVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G + + ++ + + +GG +++ + + +GA+ + I I Sbjct: 168 GTGH------ISRIEKFWDEGYFMYAGGVNSIDDLKK-LENMGFNGAIIGKALYNGNIKI 220 Query: 242 GELK 245 ELK Sbjct: 221 EELK 224 >UniRef50_A0Q6L0 TRNA-dihydrouridine synthase n=19 Tax=Francisella RepID=A0Q6L0_FRATN Length = 328 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 58/200 (29%), Gaps = 8/200 (4%) Query: 61 VDKSWVSRV-AEVIDIPF---CVAGGIKSLEDAAKIL--SFGADKISINSPALADPTLIT 114 + + + E + P I S A K + + D + IN P + Sbjct: 52 RNWETMEMLYMENSEKPLGIQIFGTDIDSFVGATKYIAENTECDFLDINMGCPM-PKVAK 110 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 +L + V I A H ++ + + G I Sbjct: 111 KLQAGAALLKDVNRIHEILTAVVKAVHKPVTVKMRIGWDDKNINAIEVAKACEDAGVSAI 170 Query: 175 VLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++ ++ + G + + ++ VR+ + +I +G VD + Sbjct: 171 AIHGRTREQMYTGKANWDIIRDVRKAVDIVVIGNGDVFCPHSAKAMIEHTGVDAVMVGRA 230 Query: 234 FHKQIINIGELKAYLATQGV 253 ++ YL T + Sbjct: 231 SRGNPWIFRQIAKYLNTGEL 250 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 3/120 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V VK + + I + + +AK + G + + T + + V Sbjct: 136 VHKPVTVKMRIGWDDKNI-NAIEVAKACEDAGVSAIAIHGRTREQMYTGKANWDIIRDVR 194 Query: 71 EVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + +DI G + A ++ G D + + + +P + ++A ++ Sbjct: 195 KAVDIVVIGNGDVFCPHSAKAMIEHTGVDAVMVGRASRGNPWIFRQIAKYLNTGELIPPP 254 >UniRef50_B7GFK6 tRNA-dihydrouridine synthase n=211 Tax=Bacteria RepID=B7GFK6_ANOFW Length = 351 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 55/179 (30%), Gaps = 5/179 (2%) Query: 78 CVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G ++L AAK + AD I IN ++ + I A Sbjct: 90 IFGGEKETLVQAAKYVDQHTNADIIDINMGCPVPKITKCDAGAKWLLDP--NKIYDMVAA 147 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 ++ Q V++ G + ++ + + G D +K Sbjct: 148 VVDAVEKPVTVKMRIGWDENHIYAVENAQAVERAGGQAVAVHGRTRVQMYEGKADWNVIK 207 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +V+E +P+I +G T + VDG + I YL T + Sbjct: 208 QVKEAVRIPVIGNGDVQTPQDAKRMLEQTGVDGVMIGRAALGNPWMIYRTVRYLETGEL 266 Score = 98.8 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 3/114 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + I V A+ G + + T D + + +V E + IP Sbjct: 158 VKMRIGWDENHIY-AVENAQAVERAGGQAVAVHGRTRVQMYEGKADWNVIKQVKEAVRIP 216 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 G +++ +DA ++L G D + I AL +P +I R ++ Sbjct: 217 VIGNGDVQTPQDAKRMLEQTGVDGVMIGRAALGNPWMIYRTVRYLETGELIPEP 270 >UniRef50_Q6F288 TRNA dihydrouridine synthetase n=3 Tax=Mollicutes RepID=Q6F288_MESFL Length = 325 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 9/237 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIP 76 K VQ + L + E+GAD + + + S ++ + + Sbjct: 11 KLVQGPMAGVSNPPFRLISK--EKGADLVCAEMVSVEGMTHNNKKTFSMLAVEKKEHPMS 68 Query: 77 FCVAG-GIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 + G ++S A K + D I +N A P + R A + I Sbjct: 69 MQIFGNDVESFIVATKWIDENVDCDIIDLNIGCPA-PKVAVRSASGSSLLKTPELIYDIV 127 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 A ++ + ++K GA I ++ + +G D E+ Sbjct: 128 KAVVENTSKPVTAKIRLGWDKESVNAVEVSKLIEKAGASGITVHGRTRSEFYSGHADWEK 187 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +K+V+E ++P+I +G DG + + E+ +L Sbjct: 188 IKEVKEAVNIPVIGNGDVIDGPSAKAMLELTGCDGVMISRGCQGNPWIFREIAHFLE 244 >UniRef50_Q1D4M2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_MYXXD Length = 238 Score = 126 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 93/251 (37%), Gaps = 17/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IP +D+R+G V+ V + + + K++ G D+ A+ G+ Sbjct: 1 MIAIPAIDLREGACVQLVGGSYAAEKVRVEEPLEALKQWRRHGFRAFHVVDLDAAL-GKG 59 Query: 61 VDKSWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + + ++ + F V GG++ + +LS GA+ + + + A+ D + +A+R Sbjct: 60 SNADAIFQLTAYERGLTFSVGGGVRDSDRVETVLSGGAEFVVVGTRAIEDAGWLADIANR 119 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 F + +V T + + + + + G +++ + Sbjct: 120 FPGRVVVAADVKGR-----------EVVTRGWTAGSHRDIREVLAAFEPLPLGGLLVTAV 168 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +++G +G DL +++V L ASGG TME + + Sbjct: 169 HKEGQLSGVDLPLMREVASTSRHRLYASGGVTTMEDLRALAAAGAYGAV-IGMALYTGRL 227 Query: 240 NIGELKAYLAT 250 + + A Sbjct: 228 DASAVAREFAG 238 >UniRef50_C0WDP2 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WDP2_9FIRM Length = 321 Score = 126 bits (318), Expect = 6e-28, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 55/186 (29%), Gaps = 5/186 (2%) Query: 71 EVIDIPFCVAGGIKSLEDA--AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 + + G + S A + S GAD I +N + Sbjct: 62 KEHPTAIQLFGSVPSELAAAGKIVESRGADMIDVNMGCPVHKIVSNGEGSALMKDP--DK 119 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 + A + + Q +K G + ++ + G Sbjct: 120 VYAILAALVDAVSIPVTVKFRAGWDEAHKNAAVIAQMAEKAGVSAVCVHGRTRAQFYQGK 179 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 D + ++ V+E +P++ +G E L + DG + A ++KA Sbjct: 180 ADWDIIRAVKESVGIPVLGNGDIFHAEDALRMKEETGCDGVMIARGAEGNPWIFRDVKAL 239 Query: 248 LATQGV 253 L + + Sbjct: 240 LHGKAI 245 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 3/132 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + V +A+ + G + + T + D + V E + IP Sbjct: 137 VKFRAGWDEAHKNAAV-IAQMAEKAGVSAVCVHGRTRAQFYQGKADWDIIRAVKESVGIP 195 Query: 77 FCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I EDA ++ G D + I A +P + + + I A Sbjct: 196 VLGNGDIFHAEDALRMKEETGCDGVMIARGAEGNPWIFRDVKALLHGKAISPVSVQERFA 255 Query: 136 ETGKYHVNQYTG 147 ++ + Sbjct: 256 MIRRHLHDLILF 267 >UniRef50_C7NHA2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NHA2_KYTSD Length = 470 Score = 126 bits (317), Expect = 7e-28, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 89/254 (35%), Gaps = 21/254 (8%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 + R+ P +DVR G + Q + D + +GA+ L D+ + G Sbjct: 1 MPLRLWPAVDVRGG---RTAQVDPDSPLSDPQAAVDHWVAQGAERLHLVDLDRA-TGAGE 56 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + + R+ +P V+GGI S D + LS+GA ++ +S ADP G Sbjct: 57 NDALLERLVRRASVPVEVSGGILSPRDVERALSWGAVAVTTSSALWADPAAALEWLQGCG 116 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V + T + D ++ G VL Sbjct: 117 AEVQVGI------------DLVGDRVVARGTDLALGPVADLWPDLAGLGERRWVLASAAA 164 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG-----ALAASVFHK 236 DG G DL L+ E LIASGG T + V G + + + Sbjct: 165 DGRMTGPDLAGLRAATEHLTGTLIASGGVSTTGDLVAVSSLRGVAGPAVGEVILGAALYA 224 Query: 237 QIINIGELKAYLAT 250 +++G + L Sbjct: 225 GAVDLGRAQRLLGE 238 >UniRef50_D0U4P6 tRNA-dihydrouridine synthase n=2 Tax=uncultured SUP05 cluster bacterium RepID=D0U4P6_9GAMM Length = 324 Score = 126 bits (317), Expect = 8e-28, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 3/162 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + L FGAD I IN A +V +A + Sbjct: 85 AQQALKFGADIIDINMGCPAKKVCNKAAGSALMQDEALVKS--ILNAVVSAVDIPVTLKM 142 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 + V+ + ++ G + ++ ++ G + + +K V+ +P+IA+ Sbjct: 143 RTGWNVSNKNAPTIAKIAEEAGIQMLSVHGRTREDKYTGMAEYDTIKAVKSQVGIPVIAN 202 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G + + + DG + I E+ YL Sbjct: 203 GDITSAKKAQSVLQYTGADGVMVGRATQGNPWIIHEIDHYLK 244 Score = 97.6 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 5/113 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKS 64 ++ +D+ +K N +AK E G L + T + + Sbjct: 130 VVSAVDIP--VTLKMRTGWNVSNKNAP-TIAKIAEEAGIQMLSVHGRTREDKYTGMAEYD 186 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 + V + IP G I S + A +L GAD + + +P +I + Sbjct: 187 TIKAVKSQVGIPVIANGDITSAKKAQSVLQYTGADGVMVGRATQGNPWIIHEI 239 >UniRef50_Q7U923 Putative imidazole glycerol phosphate synthase subunit hisF2 n=1 Tax=Synechococcus sp. WH 8102 RepID=HIS62_SYNPX Length = 269 Score = 126 bits (316), Expect = 9e-28, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 11/238 (4%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYA----EEGADELVFYDITASS 56 M KRII L DG F+ IGD L + Y DEL+ DI+ S Sbjct: 1 MSKKRIIFVLLYCDGFFCLSRNFKLQR-IGDFRWLQRNYNFNYSATFIDELIILDISRKS 59 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + ++E I +P GGI+S EDA + GADK+ +N+ + P + ++ Sbjct: 60 RDINKFATLLYNLSENIFVPITAGGGIRSFEDAKVLFENGADKVCLNTSLIQCPHVSEKI 119 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + +G Q +V ID +D K+ ++ Q+ + + + EI+L Sbjct: 120 SSVYGQQSLVASIDFKHDHGDFKF------FIDNGLIEVQYNIQELISFLDPLPFCEILL 173 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +++DG G+DL R+ P+I GGAG +H +E D A + Sbjct: 174 QSVDRDGTGTGFDLTLANTFRDQLSKPIILLGGAGHSDHLVEGLLHQSTDAVATAHLL 231 >UniRef50_Q6KZD4 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Picrophilus torridus RepID=Q6KZD4_PICTO Length = 222 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 86/242 (35%), Gaps = 31/242 (12%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 + P +D+ +G+ V R + GD V A R+ E D L D+ + + + ++ Sbjct: 4 VYPAIDIYNGRAVFLENGRLERIKVYGDPVYYALRFQEY-FDFLHVIDLNGAIENKRKNR 62 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + + + V GG+++L D + FGA I + + L+ Sbjct: 63 DVIKNIIKEVKAKVQVGGGLRTLNDVIDVYDFGAYSAIIGTNIDIEVDKNVTLSIDV--- 119 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + +T + + + + ++ R + + DG Sbjct: 120 ------------------YKDRVANRGWLNITDNDPVSFYKMLKNR-FSRFIYTNIGSDG 160 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + + + + + I +GG + +A ++ G + ++ I+ GE Sbjct: 161 T----NNSGIPE-KFWDNEYFIYAGGVSGINDVKKALKN-GFSGIIIGRALYENRIDPGE 214 Query: 244 LK 245 LK Sbjct: 215 LK 216 >UniRef50_A7S213 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S213_NEMVE Length = 570 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 67/217 (30%), Gaps = 7/217 (3%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKIL 93 + + GAD T G+ + + V R + + G ++ A++L Sbjct: 235 RICKQYGADITCGEMAMCTNLLQGQQSEWALVKRHSSEDIFGVQLCGAFPDTMTKCAELL 294 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 D I IN+ D + + + Sbjct: 295 QKETDVDFIDINTGCPIDLVFNKGAGSALMERKGKLQQIVQGMKSVIDIPLTVKIRAGIH 354 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIASGG 209 + W V ++ G + ++ +++ D + + +V + +P+ +G Sbjct: 355 DKKYTWNAHKLVGNLRDWGTDMVTIHGRSREQRYTKSADWDYISEVAKLASPMPVFGNGD 414 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E ++ + A V G + A + E+K Sbjct: 415 ILSFEDAMQHRKQAGVAGVMIARGAIIKPWIFTEIKE 451 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 7/165 (4%) Query: 9 CLDVRDGQVVKGVQF-RNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWV 66 +D+ VK + + + L + G D + + + + D ++ Sbjct: 340 VIDIP--LTVKIRAGIHDKKYTWNAHKLVGNLRDWGTDMVTIHGRSREQRYTKSADWDYI 397 Query: 67 SRVAE-VIDIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQC 124 S VA+ +P G I S EDA G + I A+ P + T + ++ Sbjct: 398 SEVAKLASPMPVFGNGDILSFEDAMQHRKQAGVAGVMIARGAIIKPWIFTEIKEQ-RHWD 456 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 I + + + D T+ L+W+ + Sbjct: 457 ISSSERLDILRQFVNAGLEHWGSDTQGVEKTRRFLLEWLSFTCRY 501 >UniRef50_P37567 Probable tRNA-dihydrouridine synthase 1 n=19 Tax=Bacilli RepID=DUS1_BACSU Length = 333 Score = 125 bits (315), Expect = 1e-27, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 5/179 (2%) Query: 78 CVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G ++L +AAK + AD I IN ++ + I A Sbjct: 72 IFGGKKETLVEAAKFVDQNTTADIIDINMGCPVPKITKCDAGAKWLLDP--DKIYEMVSA 129 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 + + Q V++ G + L+ + + G + + +K Sbjct: 130 VVDAVNKPVTVKMRMGWDEDHIFAVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDIIK 189 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +V++ +P+I +G T + + VDG + I YL T + Sbjct: 190 EVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKL 248 Score = 99 bits (248), Expect = 6e-20, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 3/110 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + + I V A+ G + + T + + V + + IP Sbjct: 140 VKMRMGWDEDHIF-AVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDIIKEVKQSVSIP 198 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCI 125 G +K+ +DA ++L G D + I AL +P +I R + Sbjct: 199 VIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKL 248 >UniRef50_B8FGI4 TIM-barrel protein, nifR3 family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGI4_DESAA Length = 332 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 63/223 (28%), Gaps = 9/223 (4%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDAAKI 92 GA + + ++ E + + G G+ + A + Sbjct: 29 MAKRHGAALVCSEMISSNGLIRYQKKTMELMASKEEERPLSIQIFGSDPGVL-ADSARIV 87 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 GAD + IN L + + S Sbjct: 88 AEHGADIVDINFGCSVKKVLKGGAGSALMADL--PRAEKILKEVRKAISLPFTIKMRSGW 145 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAG 211 + E + + Q G + L+ +G+ D Q+K++++ +P+I +G Sbjct: 146 DASGDEAMALGRIAQDAGVDAVALHPRTAKQGFSGHSDWSQIKRLKQELTIPVIGNGDVT 205 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 EH LE DG + + L + +E Sbjct: 206 KPEHVLEMMEQTGCDGVMIGRAVLYAPWIFRQALCLLENRPME 248 Score = 90.7 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 5/156 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 +K + + + L + + G D + + TA D S + R+ + + IP Sbjct: 139 IKMRSGWDAS-GDEAMALGRIAQDAGVDAVALHPRTAKQGFSGHSDWSQIKRLKQELTIP 197 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI--VVGIDTWY 133 G + E +++ G D + I L P + + + + + D Sbjct: 198 VIGNGDVTKPEHVLEMMEQTGCDGVMIGRAVLYAPWIFRQALCLLENRPMEEIDLDDRKK 257 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 Y G+E RV + +V+ + Sbjct: 258 VLFDYLDDTMDYLGEEHGCRVMRSRLAWFVKGLPNA 293 >UniRef50_Q6SFW7 NifR3/Smm1 family protein n=1 Tax=uncultured marine bacterium 578 RepID=Q6SFW7_9BACT Length = 322 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 5/188 (2%) Query: 70 AEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 +E I +AG E A + L FGAD I IN A Sbjct: 62 SEQSPISIQIAGSESQELAESAKQALEFGADIIDINMGCPAKKVCNKAAGSALMKNE--K 119 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 ++ A ++ + + + G + ++ + NG Sbjct: 120 LVEDIIKAVVNAVNIPVTLKMRTGWNEENKNAPTIAKIAEDNGIKMLAIHGRTRAQKYNG 179 Query: 188 -YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + +KK++ + +P++A+G + + + D + +G++ Sbjct: 180 DAEYDTVKKIKGIVSIPVVANGDITSAQKAKKVLDYTGADAVMLGRATQGNPWLVGQINN 239 Query: 247 YLATQGVE 254 YL T Sbjct: 240 YLKTGKSP 247 Score = 95.7 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 3/100 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K N E +AK + G L + T + + V ++ ++ IP Sbjct: 139 KMRTGWNEENKNAP-TIAKIAEDNGIKMLAIHGRTRAQKYNGDAEYDTVKKIKGIVSIPV 197 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 G I S + A K+L GAD + + +P L+ ++ Sbjct: 198 VANGDITSAQKAKKVLDYTGADAVMLGRATQGNPWLVGQI 237 >UniRef50_B3QWF2 TIM-barrel protein, nifR3 family n=26 Tax=Bacteroidetes/Chlorobi group RepID=B3QWF2_CHLT3 Length = 402 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 3/165 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 +E A + G D I IN A Q ++ DA + Sbjct: 124 VEAAQMAEAAGPDFIDINYGCPAKKVAGKGAGSGLLCQP--DLMEKITDAVVKAVRLPVT 181 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 LD V+ ++ G + ++ + + G D + + +EV +P+ Sbjct: 182 AKTRIGWDERSISILDTVRRLEGCGIQALSIHGRTRAQMYKGRADWSWIARAKEVATIPI 241 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 I +G T E F + VDG + E K + Sbjct: 242 IGNGDIWTAEDAKRMFDETGVDGVMIGRGAIGNPFLFREAKHLIQ 286 >UniRef50_A9KHE5 TIM-barrel protein, nifR3 family n=2 Tax=Clostridiales RepID=A9KHE5_CLOPH Length = 324 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 3/168 (1%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 E A +I D + IN + ++ I A + Sbjct: 83 EMAKRIEHRNFDFLDINMGCPVPKVVNNGEGSALMLKP--ERIGEIVSAISKAIKKPVTV 140 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLI 205 ++ + +++ G I ++ ++ +G D + +K V+E +P+I Sbjct: 141 KIRKGFTKDNINAVEVAKVIEQSGGAAIAVHGRTREQYYSGEADWDIIKAVKEAVSIPVI 200 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +G T E D + A + K YL T + Sbjct: 201 GNGDVQTPEDVKRMMSYTGCDAVMIARGVRGNPWFFSQAKHYLNTGEI 248 Score = 106 bits (265), Expect = 8e-22, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 3/116 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 ++ VK + + + V +AK + G + + T D + V Sbjct: 134 IKKPVTVKIRKG-FTKDNINAVEVAKVIEQSGGAAIAVHGRTREQYYSGEADWDIIKAVK 192 Query: 71 EVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 E + IP G +++ ED +++S G D + I +P ++ I Sbjct: 193 EAVSIPVIGNGDVQTPEDVKRMMSYTGCDAVMIARGVRGNPWFFSQAKHYLNTGEI 248 >UniRef50_Q58114 Uncharacterized protein MJ0703 n=8 Tax=Methanococcales RepID=Y703_METJA Length = 226 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 92/259 (35%), Gaps = 45/259 (17%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYDITA 54 +IIP +D++D V G E + + +AK Y E GA + D+ Sbjct: 1 MKIIPVIDLKDKIAVHGKSGNRDEYKPLESVICKSSNPIEVAKAYKERGAKTIYIADLN- 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED---AAKILSFGADKISINSPALADPT 111 G + + + I V G+KS ED K+L+ D+ + + L D Sbjct: 60 FIMGNGDNFDIIKEID---FINKIVDIGVKSREDLETIKKVLNKD-DRAIVATETLKDIE 115 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 L+ + IVV +D + T Sbjct: 116 LLKE-------KDIVVSLDFKNGNLLNYSLDEILSCVRDDTP------------------ 150 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +++ ++ G + G + E +K V + + P+ GG ME E + VD L A Sbjct: 151 --LIILDISSVGTQRGVNAELIKYVLDKTNNPVYVGGGIKGMEDL-ELCYNLGVDAVLIA 207 Query: 232 SVFHKQIINIGELKAYLAT 250 + HK ++++ E+ Sbjct: 208 TAIHKGVLDLEEIINKFGD 226 >UniRef50_Q3AZ67 Dihydrouridine synthase TIM-barrel protein nifR3 n=24 Tax=Cyanobacteria RepID=Q3AZ67_SYNS9 Length = 356 Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 3/162 (1%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GA I IN I + G+ +A + Sbjct: 115 QAGAFLIDINMGCPVRK--IAKKGGGSGLIRDPNLATQILEAVVDAVSIPVTVKTRLGWC 172 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 + + + W +++Q GA + L+ ++ G + + +V++ +P+IA+G + Sbjct: 173 GSSSDPITWCRQLQNAGAQMLTLHGRTREQGFKGQANWNAIAEVKQALTIPVIANGDINS 232 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 L DG + +G+++A + + Sbjct: 233 PTDALRCLEITGADGVMVGRGTMGSPWLVGQIEAAFMNRPIP 274 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 3/115 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK D + ++ GA L + T + + + ++ V + + IP Sbjct: 165 VKTRLGWCGS-SSDPITWCRQLQNAGAQMLTLHGRTREQGFKGQANWNAIAEVKQALTIP 223 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 G I S DA + L GAD + + + P L+ ++ F + I D Sbjct: 224 VIANGDINSPTDALRCLEITGADGVMVGRGTMGSPWLVGQIEAAFMNRPIPATPD 278 >UniRef50_C7LZ82 Histidine biosynthesis protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ82_ACIFD Length = 246 Score = 123 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 89/257 (34%), Gaps = 21/257 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH--EIIGDIVPLAKRYAEEGADELVFYDITASSD-GRV 60 ++ +D+ DG+ V+ Q R GD + + GA D+ + G Sbjct: 1 MELVVAVDLLDGEAVRLRQGRFDAPRRFGDPRRYVEGALDAGARWFHVVDLDRARTPGDR 60 Query: 61 VDKSWVS---RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + V + V GG+++ D A++L GA ++ + + + Sbjct: 61 RNADMVGDLIALVREAGGSVEVGGGVRTARDIAELLETGASRVVLGTALV------EETL 114 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 D + +V +D E + R L+ + RG +L Sbjct: 115 DELDPEHLVAALDYRRGDEGA-----LEVVVSAWERSGGRRLLEASARLFARGVRTQLLT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV----DGALAASV 233 + +DG+ +G DL + + EV V +IASGG + + + GA+ + Sbjct: 170 DVGRDGMASGPDLGTYQGLCEVVPVEVIASGGVASADDLAKLAAIRGARGAVWGAVVGTA 229 Query: 234 FHKQIINIGELKAYLAT 250 + E + Sbjct: 230 LLDGSLGFDEALSACRA 246 >UniRef50_C1FNC8 Dihydrouridine synthase n=35 Tax=cellular organisms RepID=C1FNC8_CLOBJ Length = 323 Score = 123 bits (309), Expect = 5e-27, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 47/152 (30%), Gaps = 17/152 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S + DP L + + A +++ Sbjct: 112 GSALMKDPKLASEII----------------KAMKKVAKKPITVKFRKGFDKNNINAVEF 155 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + +++ G I ++ ++ + G D + KV+ +P+I +G + E LE Sbjct: 156 AKIMEQSGVDAITIHGRTREQMYEGKADWAIISKVKNSVSIPVIGNGDVFSSEDALEMIN 215 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGV 253 D DG + ++ + + V Sbjct: 216 KTDCDGIMIGRGAQGNPWIFKQINEKIKGEHV 247 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 3/133 (2%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE 71 + VK + + I + V AK + G D + + T D + +S+V Sbjct: 134 KKPITVKFRKGFDKNNI-NAVEFAKIMEQSGVDAITIHGRTREQMYEGKADWAIISKVKN 192 Query: 72 VIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + IP G + S EDA +++ D I I A +P + ++ ++ + + Sbjct: 193 SVSIPVIGNGDVFSSEDALEMINKTDCDGIMIGRGAQGNPWIFKQINEKIKGEHVYYPTP 252 Query: 131 TWYDAETGKYHVN 143 ++ Sbjct: 253 QERIDICINHYKK 265 >UniRef50_C8W3U6 TIM-barrel protein, nifR3 family n=8 Tax=Clostridia RepID=C8W3U6_DESAS Length = 322 Score = 123 bits (309), Expect = 6e-27, Method: Composition-based stats. Identities = 21/176 (11%), Positives = 48/176 (27%), Gaps = 8/176 (4%) Query: 85 SLEDAAKIL----SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 S E A+ + GA I IN I + + + Sbjct: 76 SPEYMARAASITEARGASIIDINMGCPTPK--IVKNGEGAALMRKPELAQKIISDVVQSV 133 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV 199 V + ++ ++ GA + ++ + +G D + +K V++ Sbjct: 134 RVPVTVKIRKGWDESFPNAVEMALLAEEAGAKAVTVHGRTRSQFYSGKADWDIIKSVKKA 193 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA-TQGVE 254 +P+I +G + D + +L + + Sbjct: 194 VTIPVIGNGDIREPRDAVRMLMHTGCDAVMIGRASLGNPWIFSSTVHFLDCGENLP 249 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 3/107 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + V +A E GA + + T S D + V + + IP Sbjct: 139 VKIRKGWDESFP-NAVEMALLAEEAGAKAVTVHGRTRSQFYSGKADWDIIKSVKKAVTIP 197 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGV 122 G I+ DA ++L G D + I +L +P + + Sbjct: 198 VIGNGDIREPRDAVRMLMHTGCDAVMIGRASLGNPWIFSSTVHFLDC 244 >UniRef50_Q55724 Probable tRNA-dihydrouridine synthase 1 n=34 Tax=Cyanobacteria RepID=DUS1_SYNY3 Length = 355 Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 3/165 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A K ++ GA + IN + Q V + V Sbjct: 112 AEAAQKAVAQGAQSVDINMGCPVNKITKKGGGSSLLRQPAV--AEAIVKTVVAAVDVPVT 169 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + +++ Q +Q GA + L+ + NG + + KV++ +P+ Sbjct: 170 VKTRLGWDDGEINIVEFAQRLQDAGAQMLTLHGRTRAQGYNGRARWQWIAKVKQALTIPV 229 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 IA+G ++E + + DG + + +GE++ + Sbjct: 230 IANGDIFSVEAAIACLEETGADGVMCSRGSLGYPFLVGEIEHFFK 274 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 5/120 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVD 62 K ++ +DV VK + I +IV A+R + GA L + T + Sbjct: 158 KTVVAAVDVP--VTVKTRLGWDDGEI-NIVEFAQRLQDAGAQMLTLHGRTRAQGYNGRAR 214 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFG 121 W+++V + + IP G I S+E A L GAD + + +L P L+ + F Sbjct: 215 WQWIAKVKQALTIPVIANGDIFSVEAAIACLEETGADGVMCSRGSLGYPFLVGEIEHFFK 274 >UniRef50_C4Z9L8 tRNA-dihydrouridine synthase n=26 Tax=Firmicutes RepID=C4Z9L8_EUBR3 Length = 323 Score = 123 bits (309), Expect = 7e-27, Method: Composition-based stats. Identities = 28/218 (12%), Positives = 70/218 (32%), Gaps = 9/218 (4%) Query: 38 RYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAE-VIDIPFCVAGG---IKSLEDAAKI 92 E+GA L ++A + + + + + E + + G I + A +I Sbjct: 36 LCKEQGAGLLCMEMVSAKAILYKNKNTESLLSIDEREKPVSLQMFGSDPQIM-AQIAKQI 94 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 D + IN + ++ G ++ Sbjct: 95 EERPFDILDINMGCPVPKIVNNGEGSALMKNPLLAGQ--IIESIVKAIDKPVTVKIRKGF 152 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 ++ ++ GA + ++ ++ +G D + +++V+E +P+I +G Sbjct: 153 DDEHVNAVELAHVAEESGASAVAVHGRTREQYYSGKADWDIIRQVKEAVSIPVIGNGDLL 212 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + E ++ DG + A ++ Y Sbjct: 213 SAEDVIKMQEQTGCDGFMIARGAQGNPWIFSQILHYFE 250 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 5/118 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKS 64 I+ +D VK + + E + + V LA E GA + + T D Sbjct: 136 IVKAID--KPVTVKIRKGFDDEHV-NAVELAHVAEESGASAVAVHGRTREQYYSGKADWD 192 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFG 121 + +V E + IP G + S ED K+ G D I A +P + +++ F Sbjct: 193 IIRQVKEAVSIPVIGNGDLLSAEDVIKMQEQTGCDGFMIARGAQGNPWIFSQILHYFE 250 >UniRef50_O33772 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=10 Tax=Sulfolobus RepID=HIS4_SULSO Length = 232 Score = 123 bits (308), Expect = 7e-27, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 93/237 (39%), Gaps = 15/237 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP +D+ G+ VK ++ ++G+ + LA + EG + D+ A+ +G + Sbjct: 3 EIIPSIDISFGKAVKRIRGVRGTGLVLGNPIELANKLYNEGYSRIHVVDLDAA-EGVGNN 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + ++ + ++ V GGI+ +E A +++S + + ++ + L + G Sbjct: 62 EMYIKEICKIGFDWIQVGGGIRDVEKAKRLISLDVNALIFSTIVFTNFNLFYNIVREIGN 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 ++V ID + E +D +++V + I+L + + Sbjct: 122 NRVIVSIDYDDTKRVLIS----------GWKERSMEIIDGIKKVNELELLGIILTYVTNE 171 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 G G D +K ++ +GG + ++ D + F+ I Sbjct: 172 GTVKGIDYS-VKDYAKLIRGVKEYAGGVSSDSDIT-FLKNVGFDYIIVGMAFYLNKI 226 >UniRef50_C7RAI7 Phosphoribosyl-ATP diphosphatase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAI7_KANKD Length = 412 Score = 123 bits (308), Expect = 7e-27, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 92/242 (38%), Gaps = 27/242 (11%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+ DG+ V+ Q I ++ L + ++ G E+ D+ A+ G+ + Sbjct: 2 LIPSIDLLDGKAVQLQQGDASRKIVEKDNLFELLEEFSLFG--EVAIIDLNAAL-GKGDN 58 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 K+ + ++ + GGI++ E A + LS GA KI + + D + Sbjct: 59 KALIKQLIKKFSCRV--GGGIRNYETAREYLSSGAKKIILGTSCRED------FVKKLPR 110 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 ++ ID + + + + + + E + + ++ Sbjct: 111 SQLIFAIDA-----------KGDDWVTHGWQSSSDNKVAAMIDELQDNCSEFLYTQVEKE 159 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G+ G D E++++V + + + +GG ++ + + + + + Sbjct: 160 GMMQGIDRERIEQVIKQSKIQVTVAGGITDLDDI-KFINKLGANS-QLGMSIYTGKLKLD 217 Query: 243 EL 244 E Sbjct: 218 EA 219 >UniRef50_D2MLS1 TIM-barrel protein, nifR3 family n=1 Tax=Bulleidia extructa W1219 RepID=D2MLS1_9FIRM Length = 234 Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 45/116 (38%), Gaps = 1/116 (0%) Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVR 197 + ++ + +++ G I ++ + + +G DLE +K+V+ Sbjct: 41 HSKKPVTVKIRTGWDHQHKNAVEVAKVLEEAGVSAITIHGRTKSQMYSGTVDLEMIKQVK 100 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + +P+I +G T+E + VD + + + E+ A+L + Sbjct: 101 QAVSIPVIGNGDIKTVEDGKRMLEETGVDAIMIGRGLLGRPYFMSEMVAFLNGEEF 156 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 3/116 (2%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE 71 + VK +H+ + V +AK E G + + T S VD + +V + Sbjct: 43 KKPVTVKIRTGWDHQ-HKNAVEVAKVLEEAGVSAITIHGRTKSQMYSGTVDLEMIKQVKQ 101 Query: 72 VIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIV 126 + IP G IK++ED ++L G D I I L P ++ + + + Sbjct: 102 AVSIPVIGNGDIKTVEDGKRMLEETGVDAIMIGRGLLGRPYFMSEMVAFLNGEEFI 157 >UniRef50_C9KMX2 tRNA-dihydrouridine synthase n=3 Tax=Veillonellaceae RepID=C9KMX2_9FIRM Length = 322 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 35/109 (32%), Gaps = 1/109 (0%) Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC 200 + ++ + ++ G I ++ ++ G D E + +V+ Sbjct: 135 MPVTVKMRKGWDAASVNVVEMAKLAEEAGVDAIAVHGRTREQFYTGRADWEIIGEVKRAV 194 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +P+IA+G T + + DG + + YL Sbjct: 195 KIPVIANGDVRTFDDLDKIRAVTGCDGVMIGRAAQGNPWIFRQFTHYLE 243 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 10/184 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + ++V +AK E G D + + T D + V + IP Sbjct: 139 VKMRKGWDAASV-NVVEMAKLAEEAGVDAIAVHGRTREQFYTGRADWEIIGEVKRAVKIP 197 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G +++ +D KI + G D + I A +P + + + G A Sbjct: 198 VIANGDVRTFDDLDKIRAVTGCDGVMIGRAAQGNPWIFRQFTHYLETGERLPGPTMKERA 257 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM-MNQDGVRNGYDLEQLK 194 H++ + V E + +++ + +D E Sbjct: 258 AVILRHLDLLLKYK-GDYVGPREMRKHATWYTRG-----IVHGAILRDRFNKAVTREDFV 311 Query: 195 KVRE 198 ++ E Sbjct: 312 EILE 315 >UniRef50_C9XSF8 tRNA-dihydrouridine synthase n=24 Tax=Clostridia RepID=C9XSF8_CLODC Length = 322 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 22/221 (9%), Positives = 58/221 (26%), Gaps = 7/221 (3%) Query: 38 RYAEEGADELVFYDITA-SSDGRVVDKS-WVSRVAEVIDIPFCVAGGI--KSLEDAAKIL 93 E+G L I + + + E + + G A + Sbjct: 28 ICKEQGCGLLYTEMINGKALCYDDENTKKMLKIEEEEHPVAVQIFGSEPEFMGRAAEIMN 87 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + + + IN A + + A Sbjct: 88 DYSNEILDINMGCPAPKVVKNGDGSALMKNP--KLAEEVLRAVVKNSKKPVTLKIRKGWD 145 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 ++ + + G + ++ ++ G D + + ++++ +P+I +G T Sbjct: 146 DNSVNAVEIAKIAEDCGISALAIHGRTREQFYTGKADWDIIAEIKKNLSIPVIGNGDVFT 205 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +E + D + + Y+ T + Sbjct: 206 IEDSINMLDKTGCDAIMIGRGAQGNPWIFKRINHYMNTGEI 246 Score = 106 bits (264), Expect = 9e-22, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 3/109 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + + + V +AK + G L + T D ++ + + + IP Sbjct: 139 KIRKGWDDNSV-NAVEIAKIAEDCGISALAIHGRTREQFYTGKADWDIIAEIKKNLSIPV 197 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 G + ++ED+ +L G D I I A +P + R+ I Sbjct: 198 IGNGDVFTIEDSINMLDKTGCDAIMIGRGAQGNPWIFKRINHYMNTGEI 246 >UniRef50_C1F4Z7 Putative tRNA-dihydrouridine synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4Z7_ACIC5 Length = 398 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 49/163 (30%), Gaps = 3/163 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A + G D + +N A + ++ ++A G + Sbjct: 125 AEGARIVEDTGFDMVDLNLGCPAKRVVACNGGSGLLRDLPLI--AKIFEAVRGAVKIPFT 182 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + + ++ G + L+ ++ +G E + +V++ +P+ Sbjct: 183 VKFRLGWNDQHIICVPLARLAEESGLNAVSLHARTREQGYSGQARWEHIAEVKDAVRIPV 242 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 I +G T E DG + ++ Y Sbjct: 243 IGNGDVRTPEDACALVAKTGCDGVMIGRAAPANPWIFRQIAQY 285 Score = 96.5 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 3/104 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK N + I VPLA+ E G + + + T ++ V + + IP Sbjct: 183 VKFRLGWNDQHII-CVPLARLAEESGLNAVSLHARTREQGYSGQARWEHIAEVKDAVRIP 241 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADR 119 G +++ EDA ++ G D + I A A+P + ++A Sbjct: 242 VIGNGDVRTPEDACALVAKTGCDGVMIGRAAPANPWIFRQIAQY 285 >UniRef50_Q1RH84 Probable tRNA-dihydrouridine synthase n=59 Tax=Alphaproteobacteria RepID=DUS_RICBR Length = 326 Score = 121 bits (305), Expect = 2e-26, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 50/165 (30%), Gaps = 3/165 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A GA I +N A + ++A + Sbjct: 82 AEAAKMNEDMGAKIIDLNFGCPAKKVVNGYSGSALMRDE--GLAAKIFEAAVKAVKIPVT 139 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + ++ G + ++ + +G D E +K V+E +P+ Sbjct: 140 VKMRMGWDDQTKNAPTLAKIAERSGIQMVTVHGRTRCQFYSGNADWEFIKNVKEAVKIPV 199 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 IA+G EA + DG + + + I ++ YL Sbjct: 200 IANGDITNFAKAKEALEKSSADGVMVGRGAYGKPWLISQIDHYLK 244 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + LAK G + + T D ++ V E + IP Sbjct: 140 VKMRMGWDDQTKNAP-TLAKIAERSGIQMVTVHGRTRCQFYSGNADWEFIKNVKEAVKIP 198 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 G I + A + L AD + + A P LI+++ Sbjct: 199 VIANGDITNFAKAKEALEKSSADGVMVGRGAYGKPWLISQI 239 >UniRef50_C1ZDL9 Putative TIM-barrel protein, nifR3 family n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZDL9_PLALI Length = 385 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 62/203 (30%), Gaps = 6/203 (2%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-LEDAAKILSF-GADKISINSPA 106 + G ++ + GG S + DAA++L G D I IN Sbjct: 80 LVNARGLLAGSEKTLRLIATHPIDRPFAVQIFGGEASIMRDAAQLLEARGVDSIDINMGC 139 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + T A HV +Q + +E Sbjct: 140 PVLKVVKTGAGASLMCH--ADAATELVKAVVEAVHVPVTVKMRLGWDASQLTAPRFAREF 197 Query: 167 QKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDAD 224 ++ G + ++ + +G + + +++V E +P+IA+G +++ + + + Sbjct: 198 EQVGVAAVAIHGRTRAQGFSGTVNRDGIRQVVEAVDSIPVIANGDIRSVDDAIAMYDETG 257 Query: 225 VDGALAASVFHKQIINIGELKAY 247 +L + Sbjct: 258 CQAISIGRGALANPWIFRQLTEW 280 Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 4/102 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVID-I 75 VK + + A+ + + G + + T + V++ + +V E +D I Sbjct: 177 VKMRLGWDASQLTAP-RFAREFEQVGVAAVAIHGRTRAQGFSGTVNRDGIRQVVEAVDSI 235 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 P G I+S++DA + G ISI ALA+P + +L Sbjct: 236 PVIANGDIRSVDDAIAMYDETGCQAISIGRGALANPWIFRQL 277 >UniRef50_Q0BSS6 tRNA-dihydrouridine synthase n=15 Tax=Alphaproteobacteria RepID=Q0BSS6_GRABC Length = 370 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 2/166 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A + GA+ I IN + + A ++ V +A V Sbjct: 114 AEAARIAIDKGAELIDINFGCPVKKVAVGQSAGSALMRDEV-TAAKILEATVKAVSVPVT 172 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + + G I ++ + G D + +V++ +P+ Sbjct: 173 LKMRMGWDHQSLNAPALAKIAEASGIRMITVHGRTRQQFYEGKADWAFVARVKQATSLPV 232 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 I +G T+E EA + DG + + + ++ AYL Sbjct: 233 IVNGDIQTVEQAAEARAISGADGVMVGRGCYGRPWFPRQVAAYLRD 278 Score = 97.6 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 3/132 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K +H+ + LAK G + + T D ++V+RV + +P Sbjct: 174 KMRMGWDHQSLNAPA-LAKIAEASGIRMITVHGRTRQQFYEGKADWAFVARVKQATSLPV 232 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 V G I+++E AA+ + GAD + + P ++A + + Sbjct: 233 IVNGDIQTVEQAAEARAISGADGVMVGRGCYGRPWFPRQVAAYLRDGVHIPEPPLSERKQ 292 Query: 137 TGKYHVNQYTGD 148 H + Sbjct: 293 ILLNHYDAMLRC 304 >UniRef50_B0VH62 Dihydrouridine synthase family protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH62_9BACT Length = 321 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 61/218 (27%), Gaps = 5/218 (2%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG--IKSLEDAAKI 92 + GA+ L + +V + G + + Sbjct: 26 QICKNWGAEVLYSEMVSADGLTRNSAKTLQYVQFDESEHPFGIQIFGSNPLIMARAVEVL 85 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 L D + IN + + G + S Sbjct: 86 LPLKPDFMDINMGCPVKKVIRKGAGSALMQTPSLAGKIVKEVKNALLGRIPLSVKFRSGW 145 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAG 211 L + +Q+ GA + L+ + +G + EQ+K +++ +P++ +G Sbjct: 146 NFQNQNYLQFGLMLQECGADFLCLHPRTSSQMFSGTSNWEQIKILKQNVQIPVVGNGDIK 205 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 T E + + DG + + + + ++ Sbjct: 206 TPEDAQRMITETNCDGIMIGRGALGKPWLFAQSRQLIS 243 Score = 97.6 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 3/100 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK N + + + E GAD L + T+S + + + + + IP Sbjct: 139 VKFRSGWNFQN-QNYLQFGLMLQECGADFLCLHPRTSSQMFSGTSNWEQIKILKQNVQIP 197 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITR 115 G IK+ EDA +++ D I I AL P L + Sbjct: 198 VVGNGDIKTPEDAQRMITETNCDGIMIGRGALGKPWLFAQ 237 >UniRef50_B8GW86 tRNA-dihydrouridine synthase n=7 Tax=Alphaproteobacteria RepID=B8GW86_CAUCN Length = 335 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 61/196 (31%), Gaps = 7/196 (3%) Query: 64 SWVSRVAEVIDIPFCV----AGGIKSLED-AAKILSFGADKISINSPALADPTLITRLAD 118 V R A +P V + + A GA+ I +N A + A Sbjct: 57 DVVRRAAVGEGLPLTVIQLVGRDVDFMAQGARMAQEAGAEIIDLNFGCPAK-EVAAGAAC 115 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + + A V + D + + GA + ++ Sbjct: 116 GSALMREPDLAEALVAAAVEAVDVPVTVKMRLGWDIDCLNAPDIARRAEAAGAKAVTVHG 175 Query: 179 MNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 ++ G D + V++ VP++ +G E +A + DG + + + Sbjct: 176 RTRNQFYKGVADWTAVAAVKQAVSVPVLVNGDIVDGETARQALEQSGADGVMIGRGVYGR 235 Query: 238 IINIGELKAYLATQGV 253 G ++A L +G Sbjct: 236 PWIAGAIEAALEGRGF 251 Score = 93.8 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + + + +A+R GA + + T + + D + V+ V + + +P Sbjct: 143 VKMRLGWDIDCLNAP-DIARRAEAAGAKAVTVHGRTRNQFYKGVADWTAVAAVKQAVSVP 201 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 V G I E A + L GAD + I P + + Sbjct: 202 VLVNGDIVDGETARQALEQSGADGVMIGRGVYGRPWIAGAI 242 >UniRef50_D1SND3 HisA/hisF family protein n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SND3_9EURY Length = 237 Score = 120 bits (302), Expect = 4e-26, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 97/259 (37%), Gaps = 37/259 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYDITA 54 +IIP +D+ + V G E + + +A Y E GA+ + D+ Sbjct: 1 MQIIPVIDLMNKIAVHGKSGNRDEYKPLKSVICNSPNPIDVAMAYKERGAETIYIADLN- 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI--LSFGADKISINSPALADPTL 112 G + + + + V G+K ED I + DK + + L D L Sbjct: 60 FIMGNGDNFEVIKEID---FVNKIVDIGVKRREDLENIKKILNKDDKAIVATETLKDIEL 116 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + + IVV +D + Y+ D + V + Sbjct: 117 LKE-------KDIVVSLDFKNGELLLDKNFKDYSLDGILSYVREDTP------------- 156 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + + ++ G + G ++E +K V + + P+ GG M+ E + VDG L A+ Sbjct: 157 -LTILDISSVGTQRGINVELIKYVLDKTNNPVYVGGGIKGMDDL-ELCYNLGVDGVLIAT 214 Query: 233 VFHKQIINIGELKAYLATQ 251 HK I+++ E+ + + + Sbjct: 215 AIHKGILDLEEIISKFSDK 233 >UniRef50_A6NW05 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NW05_9BACE Length = 307 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 58/180 (32%), Gaps = 4/180 (2%) Query: 78 CVAGGIKSLEDAAKILS--FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 K +E+AA I GAD I IN P + ++ + + Sbjct: 55 IFGSDEKCMEEAAAIAGEVSGADIIDINMGCPV-PKVANSGDGSGLMRDVDKAVRVAEAV 113 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 G +++ + ++ G + ++ + + G + + ++ Sbjct: 114 VRGAGERPVTVKFRLGWDKGSINCVEFAKAMEAAGVSAVAVHGRTRTQMYAGTANWDYIR 173 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +V++ +P+IA+G R D A+ + +A L + + Sbjct: 174 EVKQAVSIPVIANGDVFDGPAAAHILRYTGADMAMIGRGCFGNPWVFQQARAALEGEEIP 233 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 3/110 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + I + V AK G + + T + + ++ V + + IP Sbjct: 124 VKFRLGWDKGSI-NCVEFAKAMEAAGVSAVAVHGRTRTQMYAGTANWDYIREVKQAVSIP 182 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 G + AA IL GAD I +P + + + I Sbjct: 183 VIANGDVFDGPAAAHILRYTGADMAMIGRGCFGNPWVFQQARAALEGEEI 232 >UniRef50_Q31II6 Dihydrouridine synthase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31II6_THICR Length = 320 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 56/165 (33%), Gaps = 3/165 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 ++ A S GAD I +N A Q + + + T + Sbjct: 80 VDAALWQQSQGADIIDLNMGCPAKKVCDVAAGSALMGQP--ERVADIFKSLTEAIDLPVT 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + T V ++ + Q+ G I ++ + NG + + +K V++ +P+ Sbjct: 138 VKIRTGTDVDNINAVEIAKLAQELGLKAITIHGRTRADKFNGQAEYDTIKAVKQAVDIPV 197 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 IA+G + + + DG + E+ +L Sbjct: 198 IANGDICSPKEAQFVLKYTGSDGIMIGRAAQGYPWIFREIAHFLK 242 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 5/136 (3%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVS 67 +D+ VK + V +AK E G + + T + + + Sbjct: 131 AIDLP--VTVKIRTG-TDVDNINAVEIAKLAQELGLKAITIHGRTRADKFNGQAEYDTIK 187 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIV 126 V + +DIP G I S ++A +L G+D I I A P + +A + Sbjct: 188 AVKQAVDIPVIANGDICSPKEAQFVLKYTGSDGIMIGRAAQGYPWIFREIAHFLKTGDCL 247 Query: 127 VGIDTWYDAETGKYHV 142 + H Sbjct: 248 PSPSFAEFQQVMTRHF 263 >UniRef50_C7H613 tRNA-dihydrouridine synthase n=3 Tax=Ruminococcaceae RepID=C7H613_9FIRM Length = 340 Score = 120 bits (301), Expect = 5e-26, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 51/169 (30%), Gaps = 3/169 (1%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + AA + + D + IN A + + + + Sbjct: 120 QAAAAVEQYAFDFLDINMGCPAPKIVSGGAGSKLMLDP--DRCGRIVEEVVKNTSRPVTV 177 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLI 205 ++ + ++ GA I ++ ++ + G D + V++ HVP++ Sbjct: 178 KMRKGWDAEHVTAVECAKACEQAGAVLIAVHARTREQMYTPGIDPSIIAAVKDAVHVPVL 237 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +G T E + + DG + A + A L Sbjct: 238 GNGDIRTAEDAVRMVEETGCDGVMIARAALGDPWLFERVNAALEGLPRP 286 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + + E + V AK + GA + + T +D S ++ V + + +P Sbjct: 177 VKMRKGWDAEHVT-AVECAKACEQAGAVLIAVHARTREQMYTPGIDPSIIAAVKDAVHVP 235 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 G I++ EDA +++ G D + I AL DP L R+ Sbjct: 236 VLGNGDIRTAEDAVRMVEETGCDGVMIARAALGDPWLFERV 276 >UniRef50_Q1PLA2 Putative cyclase hisF n=1 Tax=uncultured Prochlorococcus marinus clone ASNC1363 RepID=Q1PLA2_PROMA Length = 268 Score = 119 bits (300), Expect = 6e-26, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 112/259 (43%), Gaps = 14/259 (5%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYA----EEGADELVFYDITASSDG 58 KRII L + V F + IGD+ L K Y DEL+ D+T Sbjct: 4 KKRIIFTLLYNSNRFVLSRNF-RLQTIGDLDWLKKNYNFDNVAYHIDELLILDVTRGRKD 62 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 V++++E I +P + GGI SLE A GADK+SINS L D +L+T++ Sbjct: 63 SEEFCKVVTQISENIFVPLTIGGGINSLEKAKLFFKSGADKVSINSSLL-DESLVTQIVK 121 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 +G QC+V ID E + N T S + GEI +N Sbjct: 122 NYGKQCLVGSIDVLKKNEEYYVYSNNGTKLVSSLNKFFENKEFFNN------IGEIYINS 175 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +NQDG NG D+ + V VP I SGG G + +AF+ ++ A + + Sbjct: 176 INQDGTGNGLDISLAEFVSAKSEVPFIISGGVGKITDIKDAFKYDFINAVSTAHLLNFIG 235 Query: 239 INIGELKAYLATQGVEIRI 257 ++ + + G +R+ Sbjct: 236 DSLKKTRLICDECG--VRL 252 >UniRef50_Q3A324 Dihydrouridine synthase n=10 Tax=Desulfuromonadales RepID=Q3A324_PELCD Length = 342 Score = 119 bits (300), Expect = 6e-26, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 57/196 (29%), Gaps = 4/196 (2%) Query: 58 GRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 G + ++ + + G K L A K + D I +N + + Sbjct: 69 GGDATRDLLASTPSDRPLGIQLFGENPKYLSQACKQVESHGDLIDLNIGCPVKKVVRSGA 128 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + A H+ + + L+ ++ G I L Sbjct: 129 GSALMQTPA--RVAQIIAAMRRATHLPLTVKIRAGWDASHINFLEIAHIAEQEGVDAITL 186 Query: 177 NMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + + +G + + + +++ +P+I SG ++ + D + + Sbjct: 187 HPRTRSQGFSGSANWDLIAELKRRSTIPVIGSGDIFEAQYAQRMLQQTGCDAVMIGRGCY 246 Query: 236 KQIINIGELKAYLATQ 251 ++ A Q Sbjct: 247 GNPWLARDILAMRQGQ 262 Score = 98.4 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 3/102 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + I + + +A +EG D + + T S + ++ + IP Sbjct: 156 VKIRAGWDASHI-NFLEIAHIAEQEGVDAITLHPRTRSQGFSGSANWDLIAELKRRSTIP 214 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLA 117 +G I + A ++L G D + I +P L + Sbjct: 215 VIGSGDIFEAQYAQRMLQQTGCDAVMIGRGCYGNPWLARDIL 256 >UniRef50_Q3JEF8 Histidine biosynthesis n=2 Tax=Nitrosococcus oceani RepID=Q3JEF8_NITOC Length = 235 Score = 119 bits (300), Expect = 7e-26, Method: Composition-based stats. Identities = 44/259 (16%), Positives = 92/259 (35%), Gaps = 38/259 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---------GDIVPL-AKRYAEEGADELVFYDIT 53 +++P LD+ G VV + + + + A +L D+ Sbjct: 1 MQLLPVLDLWGGVVVHARGGQRDSYLPLNSPFAPNSSPLQVVAGLLQWCRFQQLYIADLN 60 Query: 54 ASSDGRVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + G + ++ +A D+ V GG E A++ + G + + + L D Sbjct: 61 -AIMGDGNNHFMIAAIARSYPDLELWVDGGTARHEAVAQLFALGVARPVVGTETLPDLES 119 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + + + + +D A G +++ + G Sbjct: 120 W-QALQSSWPEQLALSMDHRRGAFLGPAGLDRQP---------------------ELWPG 157 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGAL 229 ++ ++Q G + G D L+++ + + L+A+GG +E + V+G L Sbjct: 158 TVIAMSLDQIGSQQGPDWSLLERLGQRSLRKRISLLAAGGVRCLEDLKQ-LAAWGVEGVL 216 Query: 230 AASVFHKQIINIGELKAYL 248 AS H +N EL+ L Sbjct: 217 LASALHDGSLNPAELQQML 235 >UniRef50_Q4JIN2 Orf17 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN2_9BACT Length = 248 Score = 119 bits (300), Expect = 7e-26, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 84/249 (33%), Gaps = 26/249 (10%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI------------IGDIVPLAKRY-AEEGADELVFY 50 R+I +D+ G+ V R + +GD LA+ Y G EL Sbjct: 1 MRVIGVIDLAAGRAVHARGGRRTDYAPVRLSGAAAAHVGDPCALARTYLETRGLTELYVA 60 Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 D+ + G + + + + P + G+ S+ A L GA + + L Sbjct: 61 DLD-AIGGGPSQDAAIGALIR-LGAPLWLDSGVHSVPRARHALGLGASFVVVGLETLPSY 118 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 +++ + G + + +D + + G Sbjct: 119 DVLSEICADVGSERVAFSLDLRDGLPITAHA----------DVAAGRSVEQIAARAVEAG 168 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 G I++ + + G+ G DL + +R V L+A GG E + A DG L Sbjct: 169 VGAIIVIDVARVGMGEGVDLALISSLRSVAPAVLLAGGGVRGSEDL-ASLAHAGCDGVLV 227 Query: 231 ASVFHKQII 239 A+ H I Sbjct: 228 ATALHDGRI 236 >UniRef50_Q7ZWS1 tRNA-dihydrouridine synthase 3-like n=3 Tax=Xenopus RepID=DUS3L_XENLA Length = 640 Score = 119 bits (300), Expect = 7e-26, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 66/217 (30%), Gaps = 10/217 (4%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKIL 93 + GAD T G+ + + + R + G ++ A++L Sbjct: 312 RICKRLGADITCGEMAMCTNLLQGQPSEWALLKRHHSEDIFGVQLEGAFPDTMTKCAELL 371 Query: 94 SF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + D + IN D L+ + G+ + V + Sbjct: 372 NRTIDVDFVDINVGCPID--LVYKKGGGCGLMNRTNKFEQIVKGMNSVLDVPLTVKIRTG 429 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIASGG 209 + + ++ G + L+ +++ + E + + + VPL +G Sbjct: 430 VQEKVNIAHKLIPNLRDWGVSLVTLHGRSREQRYTKLANWEYIDQCAKIASPVPLFGNGD 489 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E A + V G + A + E+K Sbjct: 490 IISYEDANRALQ-TGVAGVMLARGALFKPWLFTEIKE 525 Score = 96.5 bits (239), Expect = 8e-19, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 61/175 (34%), Gaps = 14/175 (8%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITASS-DGRVVDK 63 LDV VK + V +A + + G + + + ++ + Sbjct: 417 VLDVP--LTVKIRTGVQEK-----VNIAHKLIPNLRDWGVSLVTLHGRSREQRYTKLANW 469 Query: 64 SWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 ++ + A+ +P G I S EDA + L G + + AL P L T + ++ Sbjct: 470 EYIDQCAKIASPVPLFGNGDIISYEDANRALQTGVAGVMLARGALFKPWLFTEIKEQ-RH 528 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 I + Y + + D T+ L+W+ + + ++ + Sbjct: 529 WDISSTERFDILKDFTNYGLEHWGSDCQGVEKTRKFMLEWLSFLCRYIPVGLLEH 583 >UniRef50_A6DPY9 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPY9_9BACT Length = 330 Score = 119 bits (299), Expect = 8e-26, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 63/205 (30%), Gaps = 8/205 (3%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIP----FCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 S + +S ++ + DIP E A ++ GAD + +N Sbjct: 41 RISSHKPSMRSLKKQIVKSGDIPLSVQIMGNNAELMAESAKLVVDCGADAVDVNMGCPTK 100 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + + + + + + + +Q + Sbjct: 101 RAVKGGVGSAMLKDPKLCYQVL--ASMREQVPCALSAKIRAGFD-NKEGVFEILQAIVDS 157 Query: 170 GAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 GA + ++ + G+ D + ++E +P+I +G T + F++ DG Sbjct: 158 GADYLAVHPRRRVDHYEGHSDWRIISALKEKSPIPVIGNGDVRTAADAVRMFKETQCDGV 217 Query: 229 LAASVFHKQIINIGELKAYLATQGV 253 + + L+ Q V Sbjct: 218 MIGRGALSNPWIFLQTSQVLSDQEV 242 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 6/146 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPF 77 K +++ + + + + GAD L + D +S + E IP Sbjct: 136 KIRAGFDNKEG--VFEILQAIVDSGADYLAVHPRRRVDHYEGHSDWRIISALKEKSPIPV 193 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQC--IVVGIDTWYD 134 G +++ DA ++ D + I AL++P + + + Q I D ++ Sbjct: 194 IGNGDVRTAADAVRMFKETQCDGVMIGRGALSNPWIFLQTSQVLSDQEVFIPNWEDIYHF 253 Query: 135 AETGKYHVNQYTGDESRTRVTQWETL 160 + + +E T E L Sbjct: 254 YHGIAQAFSDFCDNEQGTLNKTKEML 279 >UniRef50_C7RGQ7 TIM-barrel protein, nifR3 family n=4 Tax=Anaerococcus RepID=C7RGQ7_ANAPD Length = 326 Score = 119 bits (299), Expect = 9e-26, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 ++ + ++ G ++L+ + +G + + ++K++E + Sbjct: 136 VNVKIRMGIDDDSVNYIEVGKALEDSGIDYVILHGRTRKQQYSGKANWQAIRKLKETLSI 195 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 P+IA+G +++ + + + DG + A ++K Y+ + Sbjct: 196 PVIANGDVFSVKDYKDILDETGADGVMIARGAMGNPFIFRQIKDYIQGKE 245 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 3/102 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIP 76 VK + + + + K + G D ++ + T + + ++ E + IP Sbjct: 138 VKIRMGIDD-DSVNYIEVGKALEDSGIDYVILHGRTRKQQYSGKANWQAIRKLKETLSIP 196 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLA 117 G + S++D IL GAD + I A+ +P + ++ Sbjct: 197 VIANGDVFSVKDYKDILDETGADGVMIARGAMGNPFIFRQIK 238 >UniRef50_D0NNQ3 tRNA-dihydrouridine synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NNQ3_PHYIN Length = 377 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 83/248 (33%), Gaps = 30/248 (12%) Query: 18 VKGVQFRNHEIIGDIV----------PLA-KRY-AEEGADELV---FYDI---TASSDGR 59 VK + + IG LA + + GAD + ++ Sbjct: 10 VKLRGYDFYRAIGSPKRIVAPMVDQSELAFRMLCRKLGADCCYTPMLHSRLFAESAEYRE 69 Query: 60 VVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + + + + G K++ AAK++ D + +N Sbjct: 70 KMFEHHI----QDRPLVVQFCGNDPKTVLAAAKMVEGHCDAVDLNLGCPQGIARKGH--- 122 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 +G + +T +N + R ETL++ +Q+ G + ++ Sbjct: 123 -YGSFLMHDKETVKATVKTLSAGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHG 181 Query: 179 MNQDGVRNGY---DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++ + + + +++++E +P+IA+GG T E DG +++ Sbjct: 182 RTKEMNKTAVREVNWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLL 241 Query: 236 KQIINIGE 243 + + Sbjct: 242 ENPALFAD 249 >UniRef50_A8ZYE4 Putative TIM-barrel protein, nifR3 family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYE4_DESOH Length = 326 Score = 119 bits (298), Expect = 1e-25, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 54/222 (24%), Gaps = 7/222 (3%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG--IKSLEDAAKI 92 + G + + + E + GG AA + Sbjct: 27 RLAKAAGCALVYSEMVSSHGLFYQSEKTGAMLRTTPEEAPFAVQIFGGKPAVMGRAAAMV 86 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + GA I IN L + + A + S Sbjct: 87 QASGAHMIDINFGCSVKKILKSGAGAAL--MKDLPLAAEVIQAVRDAVSIPLTIKMRSGW 144 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 + + + RG + L+ G D + +++ +P+I +G Sbjct: 145 NPDGSDAFHLAEIAEARGVNAVALHPRTATQGFGGTADWSLIAALKQRTGLPVIGNGDIV 204 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 E D + ++ A LA + V Sbjct: 205 LPEDARRMLDQTGCDAVMVGRAAIGAPWIFKQINACLAGKPV 246 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 3/111 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIP 76 +K N D LA+ G + + + TA+ G D S ++ + + +P Sbjct: 138 IKMRSGWN-PDGSDAFHLAEIAEARGVNAVALHPRTATQGFGGTADWSLIAALKQRTGLP 196 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIV 126 G I EDA ++L G D + + A+ P + ++ + +V Sbjct: 197 VIGNGDIVLPEDARRMLDQTGCDAVMVGRAAIGAPWIFKQINACLAGKPVV 247 >UniRef50_Q1IVR5 Dihydrouridine synthase TIM-barrel protein nifR3 n=2 Tax=Acidobacteria RepID=Q1IVR5_ACIBL Length = 370 Score = 118 bits (297), Expect = 1e-25, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 54/165 (32%), Gaps = 4/165 (2%) Query: 85 SLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 +L DAAK++ G D + +N + + I +++ + Sbjct: 102 TLADAAKVVQDLGFDLVDLNLGCPSKRVVKCNGGSGLLRDL--PQIKVIFESVRKAVTIP 159 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 + + L+ + + G + ++ ++ +G + + +++V + Sbjct: 160 FTVKFRAGWNEKELVFLELAKLAENCGLNAVAMHARTREQGYSGQANWGWIADLKQVVKI 219 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 P+I +G T E D + +++ Y Sbjct: 220 PVIGNGDIRTPEDAAAMVAKTGCDAVMIGRSAASNPWIFRQIEQY 264 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 3/155 (1%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK N + + + LAK G + + + T + W++ + +V+ IP Sbjct: 162 VKFRAGWNEKELV-FLELAKLAENCGLNAVAMHARTREQGYSGQANWGWIADLKQVVKIP 220 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I++ EDAA ++ G D + I A ++P + ++ + + Sbjct: 221 VIGNGDIRTPEDAAAMVAKTGCDAVMIGRSAASNPWIFRQIEQYTATGRYDLPTNEDRYE 280 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 Y D + W G Sbjct: 281 MIRMYFRMLIENDTQGAEGKMKQFASWFTHGVPGG 315 >UniRef50_B0TBQ2 Dihydrouridine synthase tim-barrel nifr3 family protein n=3 Tax=Clostridiales RepID=B0TBQ2_HELMI Length = 331 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 21/201 (10%), Positives = 49/201 (24%), Gaps = 6/201 (2%) Query: 53 TASSDGRVVDKSWVSRVA-EVIDIPFCVAGGI--KSLEDAAKILSFGADKISINSPALAD 109 + + + + E I + G E A + + GA I IN A Sbjct: 52 DKALTYANRNTMEILDITGEARPIAVQIFGSEPAVMAEAARIVEAAGASIIDINMGCPAP 111 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + +A V + + ++ Sbjct: 112 KIVRNGEGACLLKTP--DLAVDIAEAVVRAVQVPVTVKMRIGWSSGRIVAPELAPRLEAV 169 Query: 170 GAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 G + ++ ++ +G D + + +P+I +G + L + Sbjct: 170 GVQALTVHGRTREMFYSGQADWSVIAETVRQVSIPVIGNGDVWEPDDALRMLVETGCAAV 229 Query: 229 LAASVFHKQIINIGELKAYLA 249 + L + Sbjct: 230 MIGRGCMGNPWIFSRLVHWAE 250 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 3/104 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK + I LA R G L + T D S ++ + IP Sbjct: 146 VKMRIGWSSGRIVAP-ELAPRLEAVGVQALTVHGRTREMFYSGQADWSVIAETVRQVSIP 204 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADR 119 G + +DA ++L G + I + +P + +RL Sbjct: 205 VIGNGDVWEPDDALRMLVETGCAAVMIGRGCMGNPWIFSRLVHW 248 >UniRef50_UPI0001BC5FF0 nitrogen regulation protein NIFR3 n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC5FF0 Length = 322 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 2/166 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A I G I IN+ + + + + E + Sbjct: 73 AKYIEKLGVKNIDINAGCPMKRVVHSGHGSALLKSPEKIKEILFTLREQLEESTKLSIKI 132 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 L + ++ G I ++ + + G D +K+++E +P+I + Sbjct: 133 RVGYDR-PENYLQIAKIAEEAGCSHITVHGRTRAQLYTGLADWSLIKEIKEHVTIPVIGN 191 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 G T E E D+ VDG + A I +++ L V Sbjct: 192 GDIFTAEAAKEKIEDSGVDGVMLARGIFGNPWLIRDIREMLQYGEV 237 Score = 99 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 4/110 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 +K + + + +AK E G + + T + + D S + + E + IP Sbjct: 130 IKIRVGYDR--PENYLQIAKIAEEAGCSHITVHGRTRAQLYTGLADWSLIKEIKEHVTIP 187 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 G I + E A + + G D + + +P LI + + + Sbjct: 188 VIGNGDIFTAEAAKEKIEDSGVDGVMLARGIFGNPWLIRDIREMLQYGEV 237 >UniRef50_C8W6Y9 TIM-barrel protein, nifR3 family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W6Y9_ATOPD Length = 363 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 70/248 (28%), Gaps = 25/248 (10%) Query: 25 NHEIIGDIVPLA----------KRYAEEGADELV---FYDITASSDGRVVDKSWVSRVAE 71 + + V +A + A G L + G V ++ Sbjct: 31 KERLSANPVLMAPMAGVSDGVYRTMARAGGAGLAYSEMVSVAGIHFGGEKTWELVEPLST 90 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADK-------ISINSPALADPTLITRLADRFGVQC 124 DI + G E + + +++ I IN + Sbjct: 91 EPDIAVQLFG--SKPEQFKEAAAQISERLGNKLALIDINMACPVPKVVKKGEGSALLDTP 148 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 A + V R + ++ + ++ GA I ++ + Sbjct: 149 --ELAANLVKACLSEVTVPVTVKIRRGRRQDEEVAPEFARAMEAAGASAIAVHGRFATQM 206 Query: 185 RNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 G + E + +V + +P+I SG + E A ++ V + A + Sbjct: 207 YRGQAEWETVNRVCDAVSIPVIGSGDMLSAEDVAHALKETGVTAVMIARGTYGNPWIFKN 266 Query: 244 LKAYLATQ 251 +A L + Sbjct: 267 TQALLEGK 274 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + R + A+ GA + + A+ R + V+RV + + IP Sbjct: 168 VKIRRGRRQDEEVAP-EFARAMEAAGASAIAVHGRFATQMYRGQAEWETVNRVCDAVSIP 226 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITR 115 +G + S ED A L G + I +P + Sbjct: 227 VIGSGDMLSAEDVAHALKETGVTAVMIARGTYGNPWIFKN 266 >UniRef50_B6W908 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W908_9FIRM Length = 321 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 17/152 (11%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 S +A+P L+ + LD Sbjct: 111 GSQLMANPKLVEEICKTLR----------------KSTDKKLNIKFRLGIDDKHINYLDI 154 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + Q G ++L+ +D + +G + + ++K++E +P+IA+G ++E F+ Sbjct: 155 GKIAQDTGIDYVILHARTKDQMYSGNANWDHIRKLKENLQIPVIANGDIFSVEDFINVID 214 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGV 253 DG + A E+K Y+ T Sbjct: 215 LTKADGVMLARGAMGNPFLFKEIKDYIKTGKY 246 Score = 87.2 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 3/102 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 +K + + I + + + K + G D ++ + T + + ++ E + IP Sbjct: 138 IKFRLGIDDKHI-NYLDIGKIAQDTGIDYVILHARTKDQMYSGNANWDHIRKLKENLQIP 196 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA 117 G I S+ED ++ AD + + A+ +P L + Sbjct: 197 VIANGDIFSVEDFINVIDLTKADGVMLARGAMGNPFLFKEIK 238 >UniRef50_A8V5Z6 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V5Z6_9AQUI Length = 119 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 3/117 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 L + IIP +D+++G+ V+ + + V +AKR+ E+GA L D+ + +G Sbjct: 3 LKEFIIPAVDIKEGRAVRLYKGDPNAVKVYGDNPVEIAKRWEEKGAKHLHIVDLDGAFEG 62 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + V ++ + +++P GG+++ E K++ G +++ I S A D L + Sbjct: 63 IPKNYKIVEQIVKSVNVPIEFGGGLRTYEAVKKMIEIGVERVVIGSLAYQDKELFEK 119 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 40/88 (45%), Gaps = 5/88 (5%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY--DLEQLKKVREVCHVPLIASGGAGTMEH 215 ++ + +++GA + ++++ DG G + + ++++ + +VP+ GG T E Sbjct: 35 NPVEIAKRWEEKGAKHL--HIVDLDGAFEGIPKNYKIVEQIVKSVNVPIEFGGGLRTYEA 92 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGE 243 + V+ + S+ ++ + Sbjct: 93 VKKMIE-IGVERVVIGSLAYQDKELFEK 119 >UniRef50_Q9KV66 tRNA-dihydrouridine synthase B n=56 Tax=Proteobacteria RepID=DUSB_VIBCH Length = 322 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 49/165 (29%), Gaps = 3/165 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A + GA I IN A V+ + A +V Sbjct: 80 AEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVI--EDILKAVVNAVNVPVT 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + L Q + G + L+ + + G + + +K V+ +P+ Sbjct: 138 LKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEAEYDSIKAVKAAVSIPV 197 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 IA+G + E D + + E++ +L Sbjct: 198 IANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFLE 242 Score = 93.8 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 3/106 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + + + +A+ + G L + T + + + V + IP Sbjct: 139 KTRTGWD-TDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEAEYDSIKAVKAAVSIPV 197 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGV 122 G I S E A +L GAD + I PA P + + Sbjct: 198 IANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFLEH 243 >UniRef50_Q5FMA1 Transcriptional regulator n=14 Tax=Firmicutes RepID=Q5FMA1_LACAC Length = 342 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 52/175 (29%), Gaps = 5/175 (2%) Query: 78 CVAGGIKSLEDAAKILS--FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G ++L AA+ + AD I IN T + I A Sbjct: 76 IFGGTEETLLQAAQYIDQNTDADIIDINMGCPVPKVTKTDAGSK--WLLDSNKIYQMVHA 133 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 ++ Q+ GA I ++ + + G D E L Sbjct: 134 VVQNVQKPVSVKMRIGWDRKHVFAVENALAAQEAGASMIAMHGRTRKQMYQGEADWEVLH 193 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 V +V VP +A+G T E +A D + + ++ YL Sbjct: 194 DVAQVLDVPFVANGDIATPELAKKALDDIGCTAVMVGRAALGNPWILKDMVHYLE 248 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 3/106 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + + + V A E GA + + T + D + VA+V+D+P Sbjct: 144 VKMRIGWDRKHVF-AVENALAAQEAGASMIAMHGRTRKQMYQGEADWEVLHDVAQVLDVP 202 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFG 121 F G I + E A K L G + + AL +P ++ + Sbjct: 203 FVANGDIATPELAKKALDDIGCTAVMVGRAALGNPWILKDMVHYLE 248 >UniRef50_C1A3V7 Putative tRNA-dihydrouridine synthase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3V7_GEMAT Length = 349 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 69/224 (30%), Gaps = 8/224 (3%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-LEDAAKIL 93 + GAD +V F S + E I + G S + DAA ++ Sbjct: 31 RLCHAHGADVVVTEFLSAEGIRRENEATISKLRFAPEERPIGVQIFGSEPSAMADAAALV 90 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 F D + IN + + ++ A + + S Sbjct: 91 TDMFSPDFVDINFGCPVKKVVRRNGGSG--CLKDLDLVEEIIRAVSKATPLPVTVKTRSG 148 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 + + +Q GA L+ + + +G + +++ +V E +P++ +G Sbjct: 149 WNEEMRDPVGIALRMQDAGAKVFALHARTRTQMYSGSANWDEIARVAEALDIPVLGNGDI 208 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 T DG + + Q + +A + V Sbjct: 209 KTALDAKRMLDHTKADGIMIGRGSYGQPWVFKQTRALIDGTPVP 252 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 3/100 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK N E + D V +A R + GA + T + + ++RVAE +DIP Sbjct: 143 VKTRSGWNEE-MRDPVGIALRMQDAGAKVFALHARTRTQMYSGSANWDEIARVAEALDIP 201 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 G IK+ DA ++L AD I I + P + + Sbjct: 202 VLGNGDIKTALDAKRMLDHTKADGIMIGRGSYGQPWVFKQ 241 >UniRef50_B2ULM0 TIM-barrel protein, nifR3 family n=3 Tax=Verrucomicrobia RepID=B2ULM0_AKKM8 Length = 334 Score = 117 bits (294), Expect = 4e-25, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 62/223 (27%), Gaps = 6/223 (2%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSW--VSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 E G D +V F ++ + + I I A G E A IL Sbjct: 35 ICKELGVDVMVTEFVSAEGILQAWERNRRYTKIENAHRPIGIQLFGADGNHMGEAARIIL 94 Query: 94 SF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 D I IN + ++ + + Sbjct: 95 DHEKPDFIDINFGCPVPKVVGKNGGSSLLKDLPLLASVAGGVVKAVGERIPVTAKIRIGW 154 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 +D + ++ G I ++ + +G + + + + VP+I +G Sbjct: 155 DFQSLCAMDACRLLENEGISMITIHGRTRSQQYSGTANWDIIDECARAMSVPVIGNGDIS 214 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 T + + V G + + G+ K YL + Sbjct: 215 TPQAVAYVKENTAVSGVMIGRAAMENPWIFGDAKYYLLHGTMP 257 Score = 87.6 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 35/134 (26%), Gaps = 3/134 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + + + + EG + + T S + + A + +P Sbjct: 149 KIRIGWDFQSLC-AMDACRLLENEGISMITIHGRTRSQQYSGTANWDIIDECARAMSVPV 207 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I + + A + + I A+ +P + + D A Sbjct: 208 IGNGDISTPQAVAYVKENTAVSGVMIGRAAMENPWIFGDAKYYLLHGTMPPARDPQEKAA 267 Query: 137 TGKYHVNQYTGDES 150 H Sbjct: 268 LILRHARMALESRH 281 >UniRef50_B2A3T5 TIM-barrel protein, nifR3 family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3T5_NATTJ Length = 327 Score = 117 bits (293), Expect = 4e-25, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 4/171 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + A K+ + G D I +N A + + ++ Sbjct: 83 ADAAVKLENLGVDSIDVNMGCPAPKIVKNGEGSALLKKP--HLAQEIVREIVNSVNLPVT 140 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + L+ +Q+ G + ++ + +G D E + K++ +P+ Sbjct: 141 VKIRKGFDRKSSDPLELALRLQEVGIKALAVHGRTCEQQYSGKADWEVVAKLKNYLDIPV 200 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL-ATQGVE 254 I +G + E + A DG + I + K L + +E Sbjct: 201 IGNGDIFSSEDAVSALEMTACDGIMLGRGLMGNPWLIEQTKGMLIKDEKIE 251 Score = 100 bits (249), Expect = 5e-20, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 42/133 (31%), Gaps = 3/133 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + D + LA R E G L + T D V+++ +DIP Sbjct: 141 VKIRKG-FDRKSSDPLELALRLQEVGIKALAVHGRTCEQQYSGKADWEVVAKLKNYLDIP 199 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I S EDA L D I + + +P LI + + + Sbjct: 200 VIGNGDIFSSEDAVSALEMTACDGIMLGRGLMGNPWLIEQTKGMLIKDEKIESPEIHEIK 259 Query: 136 ETGKYHVNQYTGD 148 K H Sbjct: 260 NEMKSHFENAIKY 272 >UniRef50_D0LJX3 TIM-barrel protein, nifR3 family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJX3_HALO1 Length = 348 Score = 117 bits (293), Expect = 5e-25, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 50/174 (28%), Gaps = 3/174 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 ++ A L GA I IN A + + + V Sbjct: 86 VQAAQLALDIGASLIDINMGCPAKRVVAGECGAALMQWPELSAELVRAVVASVPDSVPVT 145 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH--V 202 + ++ + + GA + ++ + G DLE +++VRE V Sbjct: 146 VKHRAGWNPLNRNAPEFACAMVEAGAQMVTVHGRTRTQGFAGSVDLEVIRRVREAVPARV 205 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 P++ +G ++ +L D + L A R Sbjct: 206 PVVGNGDVVCVDDYLRMREHTGCDAVMIGRGALGNPWLFRSLHALAHGLPDPGR 259 Score = 86.8 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 39/128 (30%), Gaps = 5/128 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVID-- 74 VK N A E GA + + T + VD + RV E + Sbjct: 146 VKHRAGWNPLNRNAP-EFACAMVEAGAQMVTVHGRTRTQGFAGSVDLEVIRRVREAVPAR 204 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 +P G + ++D ++ G D + I AL +P L L D Sbjct: 205 VPVVGNGDVVCVDDYLRMREHTGCDAVMIGRGALGNPWLFRSLHALAHGLPDPGRPDMAE 264 Query: 134 DAETGKYH 141 H Sbjct: 265 RYRVFCEH 272 >UniRef50_B1ZWU6 TIM-barrel protein, nifR3 family n=6 Tax=Verrucomicrobia RepID=B1ZWU6_OPITP Length = 370 Score = 116 bits (292), Expect = 5e-25, Method: Composition-based stats. Identities = 22/198 (11%), Positives = 50/198 (25%), Gaps = 6/198 (3%) Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADPTLITRLA 117 V+ AE + + G + + + A GA + IN + R+ Sbjct: 53 PAALKLVASSAEDRPMSIQLFGSVPTEMRDAARICEDLGAQAVDINMGCPVRKVV--RVG 110 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + + D + ++ G + ++ Sbjct: 111 GGSAMMTELNQTAALVRGMIEAVKIPVTAKMRLGWDDENLTAPDLARVLEDAGVAAVFVH 170 Query: 178 MMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + +G +L + V + +P+I +G T E G Sbjct: 171 GRTRAQGFSGTVNLAGIAAVVQAVKRIPVIGNGDVTTPEAARAMIEQTGCAGVSIGRGAF 230 Query: 236 KQIINIGELKAYLATQGV 253 L + + Sbjct: 231 YDPWIFRRTHHLLTSGEL 248 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 4/131 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVID-IP 76 K + E + LA+ + G + + T + V+ + ++ V + + IP Sbjct: 140 KMRLGWDDENLTAP-DLARVLEDAGVAAVFVHGRTRAQGFSGTVNLAGIAAVVQAVKRIP 198 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + + E A ++ G +SI A DP + R + Sbjct: 199 VIGNGDVTTPEAARAMIEQTGCAGVSIGRGAFYDPWIFRRTHHLLTSGELWPEPGFDERV 258 Query: 136 ETGKYHVNQYT 146 + H +Y Sbjct: 259 RVMRRHFERYC 269 >UniRef50_Q54CU9 tRNA-dihydrouridine synthase 3-like n=1 Tax=Dictyostelium discoideum RepID=DUS3L_DICDI Length = 671 Score = 116 bits (292), Expect = 5e-25, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 64/217 (29%), Gaps = 10/217 (4%) Query: 37 KRYAEEGADELVF--YDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE-DAAKI 92 + GAD + +T +G + + + R + G A+ Sbjct: 341 RICKRLGAD-ITIGEMALTTKLLEGTKSELALLKRHPCEDKFGVQICGSYVDAAVKCAEF 399 Query: 93 LSFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + AD + INS D + ++ + Sbjct: 400 IENEIDADFVDINSGCPIDLVCNMGAGAALMERP--KKVEQLLRGISSSLSCPTTIKIRI 457 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGG 209 + + + GA + L+ ++ + + + +K+ EV +PLI +G Sbjct: 458 GKSEDAPTAHKLIPSLGEWGACAVTLHGRSRAQRYSRLANWDYVKQCSEVSSIPLIGNGD 517 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + + + V + A + E+K Sbjct: 518 IYNYQDVVNIYDSSKVSSIMIARGALIKPWIFTEIKE 554 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 3/125 (2%) Query: 41 EEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GAD 98 E GA + + + + R+ + +V + +EV IP G I + +D I Sbjct: 475 EWGACAVTLHGRSRAQRYSRLANWDYVKQCSEVSSIPLIGNGDIYNYQDVVNIYDSSKVS 534 Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 I I AL P + T + ++ I + + Y ++ + D T+ Sbjct: 535 SIMIARGALIKPWIFTEIKEK-REWDISASERLDFIRDFANYGLDHWGSDRIGVDNTRKF 593 Query: 159 TLDWV 163 L+W+ Sbjct: 594 LLNWL 598 >UniRef50_Q2LR94 TRNA-dihydrouridine synthase n=2 Tax=Deltaproteobacteria RepID=Q2LR94_SYNAS Length = 326 Score = 116 bits (292), Expect = 6e-25, Method: Composition-based stats. Identities = 18/172 (10%), Positives = 48/172 (27%), Gaps = 4/172 (2%) Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 ++ DA +I+ +GAD I +N + + ++ Sbjct: 72 IFGNDPTTMADAVRIVDDYGADLIDLNMGCPVKKVVKNGAGAALLKDP--GLVSQILESV 129 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKK 195 S + + + +++G + ++ G D +++ Sbjct: 130 RKATRKPLTVKIRSGWNLQSINAVQIARIAEQQGIDAVFVHARTAVQGFAGSADWRIIEE 189 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 ++ + +I +G + + DG + E Y Sbjct: 190 IKNSVGIKVIGNGDVKSGADAWRMIKMTGCDGVMIGRGALGNPWIFNEALNY 241 >UniRef50_C7PIH0 TIM-barrel protein, nifR3 family n=7 Tax=Bacteroidetes RepID=C7PIH0_CHIPD Length = 354 Score = 116 bits (291), Expect = 8e-25, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 72/235 (30%), Gaps = 20/235 (8%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI-----PF---C 78 E + D A E+GAD + T + + + +DI P Sbjct: 20 EDVSDPPFRA-VCKEKGADLMY----TEFISSEGLIRDAIKS-RRKLDIFDYERPVGIQI 73 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAET 137 G + + AA+I+ D + IN + + + + A Sbjct: 74 FGGDEEPMAMAAQIVEATNPDLLDINYGCPVKKVVCKGAGSG--ILKDIPKMVKLTAAVV 131 Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKV 196 + + + +Q G + ++ + + G+ D + KV Sbjct: 132 KATKLPVTVKTRLGWDDDTKNIEEVAERLQDVGIQALTIHGRTRTQMYKGHADWTLIGKV 191 Query: 197 REVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + H+P+ +G T E + A VDG + E+K ++ Sbjct: 192 KNNPRIHIPIFGNGDICTPEQAIAAREKYGVDGVMIGRAAIGYPWIFNEIKHFMQ 246 Score = 94.2 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 5/136 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEV--ID 74 VK + +I +A+R + G L + T + + D + + +V I Sbjct: 140 VKTRLGWDD-DTKNIEEVAERLQDVGIQALTIHGRTRTQMYKGHADWTLIGKVKNNPRIH 198 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G I + E A +G D + I A+ P + + + Sbjct: 199 IPIFGNGDICTPEQAIAAREKYGVDGVMIGRAAIGYPWIFNEIKHFMQTGEHLPPPSVLE 258 Query: 134 DAETGKYHVNQYTGDE 149 E K H+ + Sbjct: 259 RVEVCKKHLQHSVQWK 274 >UniRef50_UPI00017B0A55 UPI00017B0A55 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A55 Length = 669 Score = 116 bits (290), Expect = 9e-25, Method: Composition-based stats. Identities = 32/241 (13%), Positives = 70/241 (29%), Gaps = 18/241 (7%) Query: 19 KGVQFRNHEIIGDIVPLA------KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVA 70 K V F + + + + GAD T G+ + + + R Sbjct: 319 KQVNFNDKLYL--PLTTCGNLPFRRVCKRFGADITCGEMAMCTNLLQGQQSEWALLKRHE 376 Query: 71 EVIDIPFCV-AGGIKSLEDAAKILS--FGADKISINSPALADPTLITRLADRFGVQCIVV 127 + ++ A++++ D + INS D + Sbjct: 377 SEDVFGVQIEGCFPDTMTRCAELINNNTEVDFVDINSGCPIDLVFKKGGGCGLMTRT--R 434 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + V + + + E++K G I L+ +++ Sbjct: 435 KFEEIVKGMNYVLDVPLTVKIRTGVQEKTNIAHKLIPEMKKWGVSMITLHGRSREQRYTK 494 Query: 188 -YDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 D + + + VPL +G + E + ++ V G + A + E+K Sbjct: 495 LADWDYISTCSKLASPVPLFGNGDILSYEDAM-MAKETGVSGIMIARGALIKPWIFTEIK 553 Query: 246 A 246 Sbjct: 554 E 554 Score = 90.3 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 14/167 (8%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITASS-DGRVVDK 63 LDV VK + +A + + G + + + ++ D Sbjct: 446 VLDVP--LTVKIRTGVQEKT-----NIAHKLIPEMKKWGVSMITLHGRSREQRYTKLADW 498 Query: 64 SWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 ++S ++ +P G I S EDA G I I AL P + T + ++ Sbjct: 499 DYISTCSKLASPVPLFGNGDILSYEDAMMAKETGVSGIMIARGALIKPWIFTEIKEK-RH 557 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 I G + + + + D T+ L+W+ + + Sbjct: 558 WDISSGERLDILRDFTNFGLEHWGSDTRGVEKTRSFMLEWLSFMCRY 604 >UniRef50_Q582L4 TRNA-dihydrouridine synthase 3, putative n=5 Tax=Trypanosomatidae RepID=Q582L4_9TRYP Length = 528 Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 19/222 (8%) Query: 37 KRYAEEGAD-----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA-- 89 + E GAD + +++ S + R + +A + DA Sbjct: 183 RVCKEYGADITVGEMAIVHNLNRLQKSE---WSLLRRHSSEDIFGLQIA--VSRPHDAIT 237 Query: 90 --AKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + G D + IN D +++ + D Sbjct: 238 WAQAVEESGFSYDFVDINCGCPVDKVVLSGCGCGLWERKGNRLRDVVQSL-VAHQSKPVT 296 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 E + + + GA + ++ ++ + + + +P+ Sbjct: 297 IKCRMGPDEENPELHKHIADYETWGAAAVTIHGRSRRQRYTKLANWSYIDNCASLTSLPV 356 Query: 205 IASGGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELK 245 I +G + E +E + +V + + E+K Sbjct: 357 IGNGDIFSCEDIVEHRAQSKNVSSFMIGRGALVKPWIFEEIK 398 Score = 80.3 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 4/134 (2%) Query: 39 YAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA--KILSF 95 Y GA + + + ++ + S++ A + +P G I S ED + S Sbjct: 317 YETWGAAAVTIHGRSRRQRYTKLANWSYIDNCASLTSLPVIGNGDIFSCEDIVEHRAQSK 376 Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 I AL P + + V I + ++ + DE T Sbjct: 377 NVSSFMIGRGALVKPWIFEEIKTG-RVWDISSHERFEMLRRFCNFGLSHWGADERGVLNT 435 Query: 156 QWETLDWVQEVQKR 169 + +W+ + + Sbjct: 436 RRFLCEWLSFLCRY 449 >UniRef50_Q1IKB1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Acidobacteria RepID=Q1IKB1_ACIBL Length = 228 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 88/238 (36%), Gaps = 15/238 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEI-IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 +IP +D+ G++V+ VQ D +R+ G + D+ A+ + ++ Sbjct: 2 LIPSIDLMGGKIVQLVQGEKKAFETTDFDAWCERF--AGFPMVQLIDLDAAKR-QGDNRE 58 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 ++ + + +P V GG++ + A ++L+ GA ++ + S + D + A +C Sbjct: 59 LIANIV--LRLPCQVGGGVRDADVAERLLAIGAKRVIVGSSYIRDGRVDVDFARGLAERC 116 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + + + + G + ++ +G+ Sbjct: 117 ------GTDRVIAAIDSREGFVAVRGWQESVPITAGEMIAALTPY-VGGFLYTHVDTEGL 169 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G+ + +++R + LIA+GG + E E VD + + + Sbjct: 170 LVGFPTDIARRLRTLTEKQLIAAGGIRSQEEIDE-LDGIGVDAV-VGMAIYTGKLVVK 225 >UniRef50_C0GJW0 TIM-barrel protein, nifR3 family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJW0_9FIRM Length = 319 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 56/203 (27%), Gaps = 5/203 (2%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFGA-DKISINSPALADPT 111 + A+ I + G + A ++ + A D + IN Sbjct: 46 GAVCAPEQTLKIARFTAQERPIGIQLFGSDPEIFARATELCNGQAPDLLDINMGCPVKKV 105 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 A + ++ ++ VQ+ GA Sbjct: 106 AGKGEGCALMRDP--DKAYAITKAVCDAATMPVTVKMRKGWDDSEVNAVEVALAVQEAGA 163 Query: 172 GEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 + ++ + +G D + +V+E VP++ +G + + D + Sbjct: 164 AAVTVHGRTRAQGYSGRADWSVIARVKEALRVPVVGNGDIWEPQDAQRMLQQTGCDAVML 223 Query: 231 ASVFHKQIINIGELKAYLATQGV 253 A + I YL T + Sbjct: 224 ARGVLGNLWLIRRTVHYLETGEL 246 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 3/134 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + + V +A E GA + + T + D S ++RV E + +P Sbjct: 138 VKMRKGWDDSEV-NAVEVALAVQEAGAAAVTVHGRTRAQGYSGRADWSVIARVKEALRVP 196 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I +DA ++L G D + + L + LI R ++ + Sbjct: 197 VVGNGDIWEPQDAQRMLQQTGCDAVMLARGVLGNLWLIRRTVHYLETGELLPEPEMAERV 256 Query: 136 ETGKYHVNQYTGDE 149 H+ ++ Sbjct: 257 RLACRHLKMVVDEK 270 >UniRef50_Q5CSA9 Dus1p, tRNA dihydrouridine synthase (Fragment) n=3 Tax=Cryptosporidium RepID=Q5CSA9_CRYPV Length = 409 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 55/185 (29%), Gaps = 9/185 (4%) Query: 76 PFCV---AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 P V ++L A+K + I IN + F + + Sbjct: 75 PMIVQFCGNDPETLVKASKFIDDKVKGIDINFGCPQNIAKRGNYG-AFLLSNPDLMERII 133 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN--QDGVRNGY-D 189 T++ ++ ++ GA I ++ GV G + Sbjct: 134 STLSESDLKCPVSCKIRILDHHDLQPTINLIKRLESAGACMIAVHGRTMTSRGVLTGPAN 193 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK--AY 247 E LK ++ C +P IA+GG E + D ++A + K Sbjct: 194 WEALKILKSRCSIPFIANGGISNYEDIQKCLNYTGADAVMSAEGILENPWLFQGFKTPEA 253 Query: 248 LATQG 252 + + Sbjct: 254 INNKP 258 Score = 94.5 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 8/117 (6%) Query: 5 RIIPCL---DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG--- 58 RII L D++ K +H + + L KR GA + + T +S G Sbjct: 131 RIISTLSESDLKCPVSCKIR-ILDHHDLQPTINLIKRLESAGACMIAVHGRTMTSRGVLT 189 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 + + + IPF GGI + ED K L+ GAD + L +P L Sbjct: 190 GPANWEALKILKSRCSIPFIANGGISNYEDIQKCLNYTGADAVMSAEGILENPWLFQ 246 >UniRef50_UPI0000D52F94 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52F94 Length = 338 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 60/214 (28%), Gaps = 8/214 (3%) Query: 38 RYAEEGADELVFYDITAS----SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 E GAD + TA+ + E IP G I + +L Sbjct: 30 LAKECGADF-TVTEFTAASGLTRKNTNSWLKVETDPREKPFIPQIFGGDISEMAKTVGML 88 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 +D I IN A + + +V T Sbjct: 89 EDRSDVIDINFGCPAPKVCRNDAGAALLRDP--DKVVSMVRRCIESTNVPITVKMRLGTG 146 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 L+ + + G I ++ +G D +Q+K++ +P+IA+G Sbjct: 147 SGPNTALEISKRLADEGVMRICVHGRTLRQRYSGIADWDQIKEISNSVDIPVIANGDVVD 206 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + G + + E+K Sbjct: 207 TKSAELCLEATNAGGLMIGRGAIGRPTIFHEIKH 240 Score = 91.5 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 58/170 (34%), Gaps = 9/170 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIP 76 VK + ++KR A+EG + + T + D + ++ +DIP Sbjct: 139 VKMRLGTGSGPNT-ALEISKRLADEGVMRICVHGRTLRQRYSGIADWDQIKEISNSVDIP 197 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQC--IVVGIDTWY 133 G + + A L A + I A+ PT+ + G G Sbjct: 198 VIANGDVVDTKSAELCLEATNAGGLMIGRGAIGRPTIFHEIKHGMGWSHKTAPWGKGGPS 257 Query: 134 DAETGKYHVN----QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 A + + Q +S ++ + + + + ++ A + L+ + Sbjct: 258 RARSWCWDRYLELSQEVYGDSGSKNLKRHAISFTKGLEGASAMRVRLHSI 307 >UniRef50_D0L1E3 TIM-barrel protein, nifR3 family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1E3_HALNC Length = 333 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 47/170 (27%), Gaps = 3/170 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A +S GA I +N A + + +A Sbjct: 94 AEAARFAVSQGAQLIDLNLGCPAKKVCKRAAGSALMAEP--DTVARLLEALVAAVDCPVS 151 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + + + + G + ++ + G + + + +V +P+ Sbjct: 152 LKMRTGPDREWRNAVAIAKIAENAGISMLSIHGRTRADRYEGEAEYDTIAEVVAAVDLPV 211 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 A+G T + + G + Q LKA L Q + Sbjct: 212 FANGDITTPQKARQVIAHTGAAGIMVGRGAFGQPWIFSALKAELTGQPLP 261 Score = 89.1 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 3/114 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + V +AK G L + T + + ++ V +D+P Sbjct: 153 KMRTG-PDREWRNAVAIAKIAENAGISMLSIHGRTRADRYEGEAEYDTIAEVVAAVDLPV 211 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 G I + + A ++++ GA I + A P + + L Q + D Sbjct: 212 FANGDITTPQKARQVIAHTGAAGIMVGRGAFGQPWIFSALKAELTGQPLPSPPD 265 >UniRef50_B6YQB2 tRNA-dihydrouridine synthase n=36 Tax=Bacteria RepID=B6YQB2_AZOPC Length = 340 Score = 114 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 61/219 (27%), Gaps = 9/219 (4%) Query: 43 GADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGAD 98 GAD + F A + + + I + G K +E A D Sbjct: 41 GADMVYTEFISADALIRHVDKIQGKLKIINSEHPIAVQIYGQDKDTMVEAARICEEMQPD 100 Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 + +N + + + + ++ Sbjct: 101 FLDLNFGCPVKKIVRRNAGAG--MLRVPKKMIEITQQVVHSVNIPITVKTRLGWDENSKI 158 Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH--VPLIASGGAGTMEH 215 +D + +Q G + ++ + +G D + V+ +P+ +G + + Sbjct: 159 IVDLAERLQDTGIALLTIHGRTGSQMYSGKADWNLIGAVKNNPRMYIPICGNGDIVSPQQ 218 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +AF VD + E+K YL + Sbjct: 219 CEQAFNRYGVDAVMIGRASIGAPWIFQEVKYYLKYNDLA 257 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 5/121 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVID-- 74 VK + IV LA+R + G L + T S D + + V Sbjct: 146 VKTRLGWDENSKI-IVDLAERLQDTGIALLTIHGRTGSQMYSGKADWNLIGAVKNNPRMY 204 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP C G I S + + + +G D + I ++ P + + + Y Sbjct: 205 IPICGNGDIVSPQQCEQAFNRYGVDAVMIGRASIGAPWIFQEVKYYLKYNDLAPKKSFEY 264 Query: 134 D 134 Sbjct: 265 Y 265 >UniRef50_C1E1T8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E1T8_9CHLO Length = 662 Score = 114 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 61/220 (27%), Gaps = 12/220 (5%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK-SLEDAAKIL 93 + G D +T G+ + + + R V GG S+ ++L Sbjct: 322 RICKRYGVDITCGEMAMVTNLLQGQPAEWALLRRHPSEDIFGAQVCGGYSDSMSRCMQLL 381 Query: 94 SF------GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 G D I IN D + ++ A Sbjct: 382 EDEVVSKGGLDFIDINMGCPIDLVCNKGAGSMLLEKPA--RMEQLVRASAPLLSCPLTLK 439 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 + + + ++ G + L+ ++ + D + + + + LI Sbjct: 440 TRMGYFDNKRVAHEIIPKMVDWGLAGMTLHGRSRQQRYSRLADWDYINQCARASPIQLIG 499 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +G + +++ V + A + E+K Sbjct: 500 NGDVFSYHDYVKNVEGQGVATCMIARGALIKPWIFTEIKE 539 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 3/138 (2%) Query: 34 PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + + + G + + + R+ D ++++ A I G + S D K Sbjct: 453 EIIPKMVDWGLAGMTLHGRSRQQRYSRLADWDYINQCARASPIQLIGNGDVFSYHDYVKN 512 Query: 93 LS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + G I AL P + T + +R I + + + + D Sbjct: 513 VEGQGVATCMIARGALIKPWIFTEIKER-RDWDISATERLDMLKDYAAFGLEHWGADARG 571 Query: 152 TRVTQWETLDWVQEVQKR 169 T+ L+W+ + + Sbjct: 572 VANTRRFLLEWLSFLHRY 589 >UniRef50_UPI000058804E PREDICTED: similar to MGC53781 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI000058804E Length = 655 Score = 114 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 61/215 (28%), Gaps = 9/215 (4%) Query: 39 YAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKILS- 94 + GAD T G+ + + + R + GG ++ A++L+ Sbjct: 301 CKKLGADITCGEMAMCTNLLQGQSSEWALLRRHPSEDIFGVQLCGGFPDTMTRCAELLND 360 Query: 95 -FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 D I IN D + + + + + Sbjct: 361 RLDIDFIDINVGCPIDLVYHKGAGSGLMNR--MGKFQEIVRGMSSVLDIPLTVKMRTGVH 418 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAG 211 V+ + GA + ++ ++ + D + LK + P I +G Sbjct: 419 NDNPVAHKIVRRIYDWGASVVTVHGRTREQRYSKLADWDYLKDCVQAADPHPFIGNGDIL 478 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E + G + A + E+K Sbjct: 479 SYEDSNFFREQSGATGQMIARGALIKPWIFTEIKE 513 Score = 88.0 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 11/166 (6%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASS-DGRVVDKSW 65 LD+ VK + V + +R + GA + + T ++ D + Sbjct: 404 VLDIP--LTVKMRTG---VHNDNPVAHKIVRRIYDWGASVVTVHGRTREQRYSKLADWDY 458 Query: 66 VSRVAEVID-IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQ 123 + + D PF G I S ED+ GA I AL P + T + ++ Sbjct: 459 LKDCVQAADPHPFIGNGDILSYEDSNFFREQSGATGQMIARGALIKPWIFTEIKEQ-RHW 517 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 I + + + D R T+ L+W+ + + Sbjct: 518 DISSSERFDILQDYINLGLLHWGSDSEGVRKTRRFLLEWLSFLHRY 563 >UniRef50_D1R8P9 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8P9_9CHLA Length = 342 Score = 114 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 49/172 (28%), Gaps = 4/172 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + A I G D + +N D +++G + Sbjct: 86 AKAAKIIEDLGFDVVDLNCGCPVDKVTKDGSGSGLLKNPLLIGE--ILSEMVAAVKIPVT 143 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVRE-VCHVP 203 + + Q +K GA I ++ + G + + +K ++ H+ Sbjct: 144 VKIRAGWDDENLCAEEITQIAEKAGAKAITIHGRTRQQAYRGPANWDHIKASKQVAKHIK 203 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +I +G F D L A Q ++ YL + + Sbjct: 204 VIGNGDVMDPTSAKRMFEYTGCDAVLVARGTMGQPWIAQDILNYLQGGTIRV 255 Score = 90.7 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 46/168 (27%), Gaps = 13/168 (7%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVID-I 75 VK + E + + + + GA + + T + + +V I Sbjct: 144 VKIRAGWDDENLC-AEEITQIAEKAGAKAITIHGRTRQQAYRGPANWDHIKASKQVAKHI 202 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 G + A ++ G D + + + P + + + I Sbjct: 203 KVIGNGDVMDPTSAKRMFEYTGCDAVLVARGTMGQPWIAQDILNYLQGGTI--------- 253 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 Q + + V E+++ G I + ++ Sbjct: 254 RVHTPEDCRQALYEHFLCTERYYNPRQVVIEMRRVGCWYIKSSGGTRE 301 >UniRef50_C2D6C5 Possible tRNA-dihydrouridine synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6C5_9ACTN Length = 390 Score = 114 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 3/164 (1%) Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 ++L I IN P + R + + C A + V Sbjct: 113 ELLGDKLSCIDINMACPV-PKVTKR-GEGSALMCDPHRACALVRACLREVRVPVTCKIRR 170 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGG 209 + ++ + +Q GA + ++ + G + E +K+V E +P+IASG Sbjct: 171 GYYMDHESAAEFGRALQDAGASALAVHGRFAKQLYKGEANWESIKRVVEAVDIPVIASGD 230 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + E L A + + + + Sbjct: 231 VMSAEDACRILYKTQAHAVLIARGTYGNPWIFDDALKIFNKKKL 274 Score = 92.2 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 3/153 (1%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + + GA L + A + + RV E +DIP Sbjct: 167 KIRRGYYM-DHESAAEFGRALQDAGASALAVHGRFAKQLYKGEANWESIKRVVEAVDIPV 225 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 +G + S EDA +IL A + I +P + F + +++ + + Sbjct: 226 IASGDVMSAEDACRILYKTQAHAVLIARGTYGNPWIFDDALKIFNKKKLLLKGNPSDLSA 285 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + E +T + Sbjct: 286 LLDAGLYNSSAREHNRHAHITDTHSISARLNAL 318 >UniRef50_B9NQS6 NifR3 family protein n=3 Tax=Rhodobacteraceae RepID=B9NQS6_9RHOB Length = 364 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 9/163 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW---YDAETGKYHV 142 E A ++ GA I IN A ++ + + ++ D +A + Sbjct: 119 AEAARQVADRGARVIDINMGCPA-----KKVTNGYSGSALLKTPDHALTLIEAVVAAVDI 173 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + D + Q G + ++ + G D + + V+E Sbjct: 174 PVTLKTRLGWDDSLLNAPDVARRAQDAGIQMVTIHGRTRCQFYKGRADWQAIGAVKEAVS 233 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 VP+IA+G A + DG + + + ++ Sbjct: 234 VPVIANGDITGPGAARTALDQSGADGVMVGRGAQGRPWLLAQI 276 Score = 93.8 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 5/115 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKS 64 ++ +D+ +K + ++ +A+R + G + + T D Sbjct: 167 VVAAVDIP--VTLKTRLGWDDSLLNAP-DVARRAQDAGIQMVTIHGRTRCQFYKGRADWQ 223 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 + V E + +P G I A L GAD + + A P L+ ++ Sbjct: 224 AIGAVKEAVSVPVIANGDITGPGAARTALDQSGADGVMVGRGAQGRPWLLAQICH 278 >UniRef50_A8N483 Putative uncharacterized protein n=2 Tax=Agaricales RepID=A8N483_COPC7 Length = 561 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 21/225 (9%) Query: 34 PLA--KRYAEEGADELVFYDITASSDGRVVDKSWVS---RVAE------VIDIPFCVAGG 82 LA + + GA + I A V+KS+ + +A D P V Sbjct: 46 ELAFRRLCRQYGAQLIYTPMINAKMFTDPVNKSYRASAFDIASGEEGDMASDRPLIVQFC 105 Query: 83 IKSLEDA---AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 + AK++ D + IN D R +G + T Sbjct: 106 ANDPDQLLQSAKVVEKYCDAVDINLGCPQDIAKRGR----YGSFLQDDWPLIYSMINTLH 161 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN---GYDLEQLKKV 196 +++ + R +T+++ + +++ GA + + ++ D +++ V Sbjct: 162 VNLSIPVTAKFRVFPDVEKTVEYAKMLERAGAQILTCHGRIREQRGQNTGLADWSKIRAV 221 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +E VP+ A+G + + DG ++A Sbjct: 222 KEAVKVPVFANGNILFQDDIARCLEETGCDGVMSAEGILYNPALF 266 Score = 93.0 bits (230), Expect = 9e-18, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 4/96 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 +FR + V AK GA L + G+ D S + V E + +P Sbjct: 171 KFRVFPDVEKTVEYAKMLERAGAQILTCHGRIREQRGQNTGLADWSKIRAVKEAVKVPVF 230 Query: 79 VAGGIKSLEDAAKIL-SFGADKISINSPALADPTLI 113 G I +D A+ L G D + L +P L Sbjct: 231 ANGNILFQDDIARCLEETGCDGVMSAEGILYNPALF 266 >UniRef50_Q88DK5 tRNA-dihydrouridine synthase B n=460 Tax=Proteobacteria RepID=DUSB_PSEPK Length = 337 Score = 114 bits (286), Expect = 3e-24, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 3/158 (1%) Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + GA I IN A +V A V + Sbjct: 90 VEAGAQIIDINMGCPAKKVCNKAAGSALLRDEALVSE--ILHAVVSAVDVPVTLKIRTGW 147 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 L+ + ++ G + ++ + + G + + + +++ +P+ A+G Sbjct: 148 DRANKNGLNVAKIAEQAGIQALAVHGRTRADLYTGEAEYDTIGAIKQAVSIPVFANGDIT 207 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + E VDG L + E++ YL Sbjct: 208 SPEKARAVLETTGVDGLLIGRAAQGRPWIFREIEHYLR 245 Score = 89.9 bits (222), Expect = 7e-17, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 5/118 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKS 64 ++ +DV +K + + + +AK + G L + T + + Sbjct: 131 VVSAVDVP--VTLKIRTGWDRAN-KNGLNVAKIAEQAGIQALAVHGRTRADLYTGEAEYD 187 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFG 121 + + + + IP G I S E A +L G D + I A P + + Sbjct: 188 TIGAIKQAVSIPVFANGDITSPEKARAVLETTGVDGLLIGRAAQGRPWIFREIEHYLR 245 >UniRef50_Q2RTR9 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTR9_RHORT Length = 362 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 45/157 (28%), Gaps = 3/157 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A ++ GA+ I IN + + + +A G + Sbjct: 86 AEAARRVEGAGAELIDINMGCPVRKVVGG--LGGSALMRDLPLAARILEAVVGAVTLPVS 143 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 ++ + + G + ++ + + +G D + V+ +P+ Sbjct: 144 LKMRLGWDDASRNAVELARLAESAGISRLTVHGRTRAQMYDGRADWPAIGLVKRAVSLPV 203 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 IA+G + E DG + Sbjct: 204 IANGDVTNLSEAREILAVTGADGVMIGRAALGAPWLP 240 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 3/97 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + V LA+ G L + T + D + V + +P Sbjct: 145 KMRLGWDDA-SRNAVELARLAESAGISRLTVHGRTRAQMYDGRADWPAIGLVKRAVSLPV 203 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLI 113 G + +L +A +IL+ GAD + I AL P L Sbjct: 204 IANGDVTNLSEAREILAVTGADGVMIGRAALGAPWLP 240 >UniRef50_A8PRW0 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PRW0_MALGO Length = 576 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 89/376 (23%), Positives = 140/376 (37%), Gaps = 119/376 (31%) Query: 1 MLAKRIIPCLDVR---DGQVV-------------------------KGVQFRNH--EIIG 30 M +RI+ CLDVR DG +V +G Sbjct: 200 MPTRRIVACLDVRSNDDGDLVVTKGESYNVRERQPAEGQAKSTADGTIRSGGKAQVRNMG 259 Query: 31 DIVPLAKRYAEEGADELVFYDITASSD---GRVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 V LA+RY EEGADE+ F +IT+ + G S ++ A I +P V GGI+ Sbjct: 260 KPVELAQRYYEEGADEIAFLNITSFRNWALGDQPMLSLLNVAAATIFVPLTVGGGIRDFT 319 Query: 88 D-----------AAKILSFGADKISINSPAL-----------------ADPTL------- 112 D A GADK+SI S A+ DP Sbjct: 320 DPDGTFHPALEVAHAYFRAGADKVSIGSEAVYAVEQLLQRATELGDCTGDPCAAPAMALR 379 Query: 113 ----ITRLADRFGVQCIVVGIDTWY------------------DAETGKYHVNQYTGDES 150 I ++A ++GVQ +VV +D D + Sbjct: 380 GDTGIEQIAHKYGVQAVVVSVDPKRVYLSDQEIDGLSDEHSSGDGPVDARTHPHASSIVC 439 Query: 151 RTRVTQWET-----------------------LDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + + V++ GAGE+++N +++DG G Sbjct: 440 GQDERPETAGQSARWWYMCTVKGGRESRDIDVVQLARGVERLGAGELLINSIDRDGSYAG 499 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD------ADVDGALAASVFHKQIINI 241 +D + + VR ++P+IAS GAG +HF + A ++ ALAA +FH++ ++I Sbjct: 500 FDEKLIDLVRGCVNIPVIASSGAGCADHFCDVLASRPAARGAPIEAALAAGIFHRREVSI 559 Query: 242 GELKAYLATQGVEIRI 257 ++K A G +R+ Sbjct: 560 MDVKKRCADAGYPVRM 575 >UniRef50_A8M908 Histidine biosynthesis protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M908_CALMQ Length = 228 Score = 113 bits (284), Expect = 4e-24, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 100/241 (41%), Gaps = 28/241 (11%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE-----IIGDIVPLAKRYAEEGADELVFYDITASS 56 +++ +IP +D+ +G VVK V+ + + + L K Y + D+ + Sbjct: 1 MSRLVIPSIDLSNGLVVKRVRGVKGSELVKLNLNEALSLVKDY-----PFIHVVDLNGAE 55 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 G+ ++ ++++ ++ V GG++ +EDA +L + ++ + + A+ +P L+ + Sbjct: 56 LGKPINVDSIAKIGATVNGRCEVGGGVRVIEDAELLLKY-CSRVVLGTVAVENPALLLNM 114 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 +R GV + V +DT + V +D + + + ++ Sbjct: 115 INRLGVDKVAVSLDTDGEWL-----------MTRGWGVRARRIMDALSNLPR--VSAVIY 161 Query: 177 NMMNQDGVRNGY--DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 ++ +G G + E +K++R+ + +GG + E DG + Sbjct: 162 TNVSVEGTGMGPRVNGELVKRLRD-IGKEVYYAGGVSSCSDV-EYLWGLGFDGVIIGYAL 219 Query: 235 H 235 + Sbjct: 220 Y 220 Score = 41.8 bits (97), Expect = 0.025, Method: Composition-based stats. Identities = 10/113 (8%), Positives = 34/113 (30%), Gaps = 4/113 (3%) Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 + + + + + V+ I + +N + +++ + K+ + Sbjct: 19 RVRGVKGSELVKLNLNEALSLVKDYPF--IHVVDLNGAELGKPINVDSIAKIGATVNGRC 76 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 GG +E + + +V + + + L V + + Sbjct: 77 EVGGGVRVIEDAELLLKY--CSRVVLGTVAVENPALLLNMINRLGVDKVAVSL 127 >UniRef50_UPI000186DAF4 tRNA-dihydrouridine synthase, putative n=2 Tax=Eumetazoa RepID=UPI000186DAF4 Length = 557 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 65/218 (29%), Gaps = 10/218 (4%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKIL 93 + E GAD T+ G + + + R + G + A++L Sbjct: 226 RICKEFGADITCSEMAMATSLLQGLKYEWALIKRHESEDLFGIQLCGNNPFVMTKCAQLL 285 Query: 94 S--FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 D I IN D + V +++ + + + + Sbjct: 286 EESTNVDYIDINLGCPIDLVYQKGGGSGLLRREKV--LESVIKSMSKVMSLPLTVKTRTG 343 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKV-REVCHVPLIASGG 209 + + G I ++ +++ D + + + +P+ +G Sbjct: 344 VYADKNVAHRLIPMFVDSGVSLITVHGRSREQRYTRTADWNYINECGKAASPIPVFGNGD 403 Query: 210 AGTMEHFLEAFRDAD-VDGALAASVFHKQIINIGELKA 246 + E + A ++ + V G + + E+K Sbjct: 404 VLSFEDYNRALKENNNVSGVMVGRGALYKPWIFKEIKE 441 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 10/158 (6%) Query: 18 VKGVQFRNHEIIGDIVP--LAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRV-AEVI 73 VK V L + + G + + + R D ++++ Sbjct: 338 VKTRTG---VYADKNVAHRLIPMFVDSGVSLITVHGRSREQRYTRTADWNYINECGKAAS 394 Query: 74 DIPFCVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 IP G + S ED + L + + AL P + + ++ I Sbjct: 395 PIPVFGNGDVLSFEDYNRALKENNNVSGVMVGRGALYKPWIFKEIKEQ-KNWDISSSERF 453 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + Y ++ + D +T+ TL+W+ + + Sbjct: 454 DIIKKFVNYGLDHWGSDTMGVELTRKFTLEWLSFLYRY 491 >UniRef50_A0M6M9 TRNA-dihydrouridine synthase n=16 Tax=Bacteroidetes RepID=A0M6M9_GRAFK Length = 330 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 72/241 (29%), Gaps = 26/241 (10%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEV------------ID 74 E + D A E+GAD + T + A+ + Sbjct: 20 EDVSDPPFRA-LCKEQGADVVY----TEFISSEG----LIREAAKSTMKLDIYEKERPVG 70 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I A L+ + G D I IN + + + + + + Sbjct: 71 IQIFGANLESMLQSVEIVEKSGPDIIDINFGCPVKKVVSKGAGAG--ILKDIDLMVSLTE 128 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 A + + ++ + +Q G I ++ + + G D + Sbjct: 129 AMVKNTSLPITVKTRLGWDHDSIKIVEVAERLQDVGCKAISIHGRTRAQMYKGEADWAPI 188 Query: 194 KKVREVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +V+ H+P+ +G + E +E + +DGA+ E+K Y T Sbjct: 189 AEVKNNPRMHIPVFGNGDVDSPEKAMEMRDNFGLDGAMIGRASIGYPWFFREVKHYFETG 248 Query: 252 G 252 Sbjct: 249 K 249 Score = 87.2 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 5/136 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEV--ID 74 VK +H IV +A+R + G + + T + + D + ++ V + Sbjct: 140 VKTRLGWDH-DSIKIVEVAERLQDVGCKAISIHGRTRAQMYKGEADWAPIAEVKNNPRMH 198 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G + S E A ++ FG D I ++ P + F + Sbjct: 199 IPVFGNGDVDSPEKAMEMRDNFGLDGAMIGRASIGYPWFFREVKHYFETGKHLAPPTLEE 258 Query: 134 DAETGKYHVNQYTGDE 149 + + H+ + Sbjct: 259 RVDAARRHLQMAIDWK 274 >UniRef50_UPI0001C41F9C hisA/hisF family protein HisAF n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41F9C Length = 231 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 89/251 (35%), Gaps = 31/251 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYD 51 ML IIP +D+ + V G D + +A GA E+ D Sbjct: 1 ML--EIIPVIDLMNSVAVSGKSGNRETYTPLQTIYASSSDPLEIALSLKSAGAKEMYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + + V V +P + G+ LE +L F A KI + + L Sbjct: 59 LDFIERNGNNNIFKIKEVNSV--LPVILDVGVDKLETFEFLLEF-AYKIIVATETLESIE 115 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + ++ +++ + I+V +D + + + + + +++ Sbjct: 116 ELGKIFEKYPKERIIVSVDVKNNELYA--------------KNMDLDLEGFKEVLRRIDP 161 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 EI+L ++ G G++ L+ E +I GG T + + + AL Sbjct: 162 NEIILLDISSVGTEGGFNKPLLESFEEFKD-KIILGGGI-TPDEISQ-LDALGIRKALVG 218 Query: 232 SVFHKQIINIG 242 + HK I + Sbjct: 219 TALHKGQIRLN 229 >UniRef50_Q4J8J0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J8J0_SULAC Length = 226 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 101/238 (42%), Gaps = 20/238 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +++P +D+ + VK ++ + I+GD + +AK EG D + D+ A+ +G Sbjct: 1 MKVMPSIDISNKVAVKRIRGKGGSGIILGDPLKIAKEIISEGYDAIHIVDLDAA-EGLGD 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +K + ++ + V GG++ LE A IL + I +++ + + ++ G Sbjct: 60 NKDIIKQICTLGFSWTQVGGGVRKLEIAKDILEY-CSSIVVSTLPITNRQEYDKIISGVG 118 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 V + + ID N Y + + V ++ +G ++ + Sbjct: 119 VDKVFLSIDY---------DDNGYVLIKGWKEKSVK-----VSDLLDLESGGVIFTYIPN 164 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +G + G D ++ V+ V + +GG G+++ L+ + D ++ F+ + Sbjct: 165 EGTKGGIDNNVVEYVKSVKKIK-EYAGGIGSLDDLLK-LKSFGFDYSIIGMSFYNGTL 220 >UniRef50_Q1Q3Q8 Strongly similar to tRNA-dihydrouridine synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3Q8_9BACT Length = 341 Score = 113 bits (283), Expect = 6e-24, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 49/157 (31%), Gaps = 3/157 (1%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 E KI G D I IN I ++ TG V Sbjct: 104 EACKKIEQLGPDIIDINMGCSVSDIAGKGAGAGMLKHP--SKISKMFNNLTGSLSVPVTG 161 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLI 205 ++ + +++ GA I ++ + +G D + + +V++ +P+I Sbjct: 162 KIRLGWDHKTRNYIEVARILEENGASLIAVHGRTRSQYFSGAADWDAIAEVKQSVKIPVI 221 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 A+G ++ E + DG + Sbjct: 222 ANGDVRSVADIAEIKKRTACDGVMIGRAAIGHPWIFR 258 Score = 98.4 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPF 77 K +H+ + + +A+ E GA + + T S D ++ V + + IP Sbjct: 162 KIRLGWDHK-TRNYIEVARILEENGASLIAVHGRTRSQYFSGAADWDAIAEVKQSVKIPV 220 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 G ++S+ D A+I D + I A+ P + Sbjct: 221 IANGDVRSVADIAEIKKRTACDGVMIGRAAIGHPWIFR 258 >UniRef50_Q5M689 Possible transcriptional regulator n=25 Tax=Streptococcus RepID=Q5M689_STRT2 Length = 350 Score = 113 bits (283), Expect = 6e-24, Method: Composition-based stats. Identities = 20/192 (10%), Positives = 54/192 (28%), Gaps = 13/192 (6%) Query: 71 EVIDIPFCVAGGIKSLEDAAKILS-----FGADKISINSPALADPTLITRLADRFGVQCI 125 + + GG E + AD + IN + + ++ Sbjct: 95 NEHPMSIQLFGG--DAEGLKRAADFIQTNTKADIVDINMGCPVNKVVKNEAGAKWLKDP- 151 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 I T + + + ++ + G + ++ ++ + Sbjct: 152 -DKIYHIVKEVTSVLDIPLTVKMRTGWSDSDL-AVENALAAESAGVSALAMHGRTREQMY 209 Query: 186 NGY-DLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 G+ D E L +V + +P I +G ++ + VD + + Sbjct: 210 TGHCDHETLARVAKAITKIPFIGNGDVRNVQDAKLMIEELGVDAVMVGRAAMNNPYIFTQ 269 Query: 244 LKAYLA-TQGVE 254 + + + + Sbjct: 270 INHFFETGEELP 281 Score = 92.2 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 7/121 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-D 62 K + LD+ VK + + V A G L + T D Sbjct: 159 KEVTSVLDIP--LTVKMRTGWSDSDL--AVENALAAESAGVSALAMHGRTREQMYTGHCD 214 Query: 63 KSWVSRVAEV-IDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRF 120 ++RVA+ IPF G +++++DA ++ G D + + A+ +P + T++ F Sbjct: 215 HETLARVAKAITKIPFIGNGDVRNVQDAKLMIEELGVDAVMVGRAAMNNPYIFTQINHFF 274 Query: 121 G 121 Sbjct: 275 E 275 >UniRef50_O26765 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase related protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26765_METTH Length = 227 Score = 113 bits (283), Expect = 6e-24, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 86/246 (34%), Gaps = 33/246 (13%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYD 51 ML IIP +D+ DG V G + D V +A GA + D Sbjct: 1 ML--EIIPVIDLMDGIAVSGKSGEREKYRPLESVYSPSPDPVNIALSLRAAGARSIYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + +G + V RV +P + G++ LE +L F A ++ + + L Sbjct: 59 LD-AIEGTGSNLEAVRRV--NHVLPVILDAGVRDLETFHFMLEF-ASRVVVATETLESTE 114 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + + + VV +D V + E D + + Sbjct: 115 ELEEILRNYPPERTVVSVD-----------VKDMRLHSRNLEIGLEELRDLLMGYEV--- 160 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +I+L + G +G++ E L+ R + +I GG E E V AL Sbjct: 161 -DIILLDIGSVGTSSGFNRELLELFRPLIE-RVIPGGGVL-PEEIPE-LEAMGVRAALVG 216 Query: 232 SVFHKQ 237 H+ Sbjct: 217 RALHEG 222 >UniRef50_A0LJ96 Putative TIM-barrel protein, nifR3 family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJ96_SYNFM Length = 352 Score = 113 bits (283), Expect = 6e-24, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 48/177 (27%), Gaps = 9/177 (5%) Query: 73 IDIPFCVAGGIKSL----EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 + + V G + E A + GA I IN+ + Sbjct: 78 VPLAVQVFG--RDPAVMAEAARLVEQGGAALIDINAGCPVRKVVRQGAGAILLKDP--DR 133 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 + +A V +++ G I ++ + +G Sbjct: 134 LAAMVEAVKRAVSVPVTVKIRVGWDNAANGVAGLARQLVSAGVDAITVHGRTAAQMYSGR 193 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 D ++ +V+ VP+I +G + E + DG + + Sbjct: 194 ADWSRIAEVKAAVAVPVIGNGDVTSPELAERMIHETGCDGVMIGRASLGNPWLFAVI 250 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 3/105 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK ++ G + LA++ G D + + TA+ D S ++ V + +P Sbjct: 151 VKIRVGWDNAANG-VAGLARQLVSAGVDAITVHGRTAAQMYSGRADWSRIAEVKAAVAVP 209 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRF 120 G + S E A +++ G D + I +L +P L ++ R+ Sbjct: 210 VIGNGDVTSPELAERMIHETGCDGVMIGRASLGNPWLFAVISRRW 254 >UniRef50_Q9RDC6 Putative uncharacterized protein SCO2497 n=4 Tax=Bacteria RepID=Q9RDC6_STRCO Length = 406 Score = 113 bits (282), Expect = 8e-24, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 54/179 (30%), Gaps = 10/179 (5%) Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P V + I G AD I +N P + + + + Sbjct: 93 PVTVG------KAVRMIAEEGLADHIDLNFGCPV-PKVTRKGGGSALPYKRHLLRAIVRE 145 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 A TG + LD + + G I L+ G D + + Sbjct: 146 AVTGAGDLPVTMKMRKGLDDDHLTYLDAGRIAVEEGVTAIALHGRTTAQHYGGTADWDAI 205 Query: 194 KKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +++E +P++ +G + E L R+ DG + + +L A + Sbjct: 206 ARLKEHVPEIPVLGNGDIWSAEDALRMVRETGCDGVVVGRGCLGRPWLFADLVAAFEGR 264 Score = 90.7 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 4/106 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVID-IP 76 K + + + + + + EEG + + T + G D ++R+ E + IP Sbjct: 158 KMRKGLDDDHLT-YLDAGRIAVEEGVTAIALHGRTTAQHYGGTADWDAIARLKEHVPEIP 216 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFG 121 G I S EDA +++ G D + + L P L L F Sbjct: 217 VLGNGDIWSAEDALRMVRETGCDGVVVGRGCLGRPWLFADLVAAFE 262 >UniRef50_Q14SX5 Putative dihydrouridine synthase n=6 Tax=Clostridiales RepID=Q14SX5_RUMFL Length = 332 Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 56/186 (30%), Gaps = 4/186 (2%) Query: 71 EVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 E + + G E +L + D I IN P ++ A ++ + Sbjct: 67 EERPMAVQLFGSEPDFMAEAVKIVLDYRPDIIDINMGCPV-PKVVGTGAGSALMKDPALA 125 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 A S + + ++ G I ++ +D +G Sbjct: 126 AAITEAAVKAAGDTPVTVKIRSGWSSDSINAPEMARALEASGTAAIAVHGRTRDMFYSGQ 185 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 D+ +K V+E VP+I +G E E + D + + E+ A Sbjct: 186 SDMNVIKAVKEAVSVPVIGNGDITDAESCAEMYGRTGCDLVMIGRGSYGNPFIFREIAAR 245 Query: 248 LATQGV 253 + Sbjct: 246 MEGSEY 251 Score = 93.0 bits (230), Expect = 8e-18, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 3/106 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIP 76 VK + + I +A+ G + + T D + + V E + +P Sbjct: 143 VKIRSGWSSDSINAP-EMARALEASGTAAIAVHGRTRDMFYSGQSDMNVIKAVKEAVSVP 201 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFG 121 G I E A++ G D + I + +P + +A R Sbjct: 202 VIGNGDITDAESCAEMYGRTGCDLVMIGRGSYGNPFIFREIAARME 247 >UniRef50_C8WHM7 TIM-barrel protein, nifR3 family n=2 Tax=Coriobacteriaceae RepID=C8WHM7_EGGLE Length = 330 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 49/174 (28%), Gaps = 22/174 (12%) Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I A KI+S G S + DP L + Sbjct: 99 DINMGCPARKIVSKG-----DGSALMKDPALAASIVRAVR----------------AAVS 137 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC 200 ++ + ++ GA I ++ + + G + + +V+E Sbjct: 138 RPVTVKFRRGWAEGDETAPEFARRMEDAGACAIAVHGRYAEQLYRGRAEWGAIARVKEAV 197 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 VP++ +G + + D + A + KA LA + Sbjct: 198 SVPVVGNGDVRSGADAVAITERTGCDAVMIARAAEGNPWLFAQAKAALAGEPEP 251 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 3/102 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + A+R + GA + + A R + ++RV E + +P Sbjct: 142 VKFRRGWAEGDETAP-EFARRMEDAGACAIAVHGRYAEQLYRGRAEWGAIARVKEAVSVP 200 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA 117 G ++S DA I G D + I A +P L + Sbjct: 201 VVGNGDVRSGADAVAITERTGCDAVMIARAAEGNPWLFAQAK 242 >UniRef50_B0UHM8 TIM-barrel protein, nifR3 family n=6 Tax=Rhizobiales RepID=B0UHM8_METS4 Length = 358 Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 59/222 (26%), Gaps = 6/222 (2%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFC--VAGGIK-SLEDAAKIL 93 + GA +V + A R ++ + E + + E A Sbjct: 45 RIARRCGASAVVSEMVAAEDLARGSAEARLRAEGEGVRPHVVQLAGCDPRWMAEGARLAE 104 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + GAD I +N A A V Sbjct: 105 ANGADVIDVNMGCPAKKVTGGEAGSALMRDLDH--AARLLAAVREAVAVPVTVKMRLGWD 162 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 D + + G + ++ + G D ++ V E +P++A+G G+ Sbjct: 163 DASRNAPDLARRAEALGLSAVTVHGRTRQQFYAGRADWAAIRAVVEAVSIPVVANGDVGS 222 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + ++ + + +G + A L Sbjct: 223 LAEARACLAESGAAAVMIGRAAVGRPWLVGAVAAGLRGAPAP 264 Score = 89.1 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 3/106 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + LA+R G + + T D + + V E + IP Sbjct: 155 VKMRLGWDDASRNAP-DLARRAEALGLSAVTVHGRTRQQFYAGRADWAAIRAVVEAVSIP 213 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFG 121 G + SL +A L GA + I A+ P L+ +A Sbjct: 214 VVANGDVGSLAEARACLAESGAAAVMIGRAAVGRPWLVGAVAAGLR 259 >UniRef50_B9MMW4 TIM-barrel protein, nifR3 family n=3 Tax=Clostridia RepID=B9MMW4_ANATD Length = 328 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 51/170 (30%), Gaps = 22/170 (12%) Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I K++ G + +P+L ++ + Sbjct: 92 DINMGCPVPKLVRSG-----EGCALMKNPSLAAKIVEEVA----------------KVSR 130 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC 200 ++ +Q+ GA + ++ + + +G D E ++KV+E Sbjct: 131 KPVSVKIRKGFDDENINAPEFAYILQESGASFVTVHGRTRAQLYSGKADWEIIRKVKEKL 190 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +P+IA+G E +A+ D + ++K Sbjct: 191 KIPVIANGDIVDFESAKKAYEVTRADSIMIGRAALGNPWVFLQIKEGFEK 240 Score = 104 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 6/157 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + E I A E GA + + T + D + +V E + IP Sbjct: 135 VKIRKGFDDENINAP-EFAYILQESGASFVTVHGRTRAQLYSGKADWEIIRKVKEKLKIP 193 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI---VVGIDTW 132 G I E A K AD I I AL +P + ++ + F + V+ Sbjct: 194 VIANGDIVDFESAKKAYEVTRADSIMIGRAALGNPWVFLQIKEGFEKGYVETKVLPHMKI 253 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 A + GD+ + +V+ ++ Sbjct: 254 RVAIEFFTQLCSEKGDKMAVLEARKHLSFFVKGIENA 290 >UniRef50_UPI000194DF67 PREDICTED: dihydrouridine synthase 3-like (S. cerevisiae) n=2 Tax=Taeniopygia guttata RepID=UPI000194DF67 Length = 718 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 14/219 (6%) Query: 37 KRYAEEGAD----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAK 91 + GAD E+ T G+ + + + R + G ++ A+ Sbjct: 390 RICKRFGADVTCGEMAV--CTNLLQGQSSEWALLKRHHTEDIFGVQLEGAFPDTMTKCAE 447 Query: 92 ILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 +L+ D + IN D L+ + + + V Sbjct: 448 LLNRTIDVDFVDINVGCPID--LVYKKGGGCALMTRSNKFEQIVRGMNSVLDVPVTVKIR 505 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIAS 207 + + + +++ GA + L+ +++ D + + +PL + Sbjct: 506 TGVQEKVNVAHKLIPRIREWGASMVTLHGRSREQRYTRSADWHYIAECARLASPMPLFGN 565 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G + E A + V G + A + E+K Sbjct: 566 GDILSYEDANRAMQ-MGVSGIMIARGALIKPWLFTEIKE 603 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 60/175 (34%), Gaps = 14/175 (8%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITASS-DGRVVDK 63 LDV VK + V +A + E GA + + + R D Sbjct: 495 VLDVP--VTVKIRTGVQEK-----VNVAHKLIPRIREWGASMVTLHGRSREQRYTRSADW 547 Query: 64 SWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 +++ A +P G I S EDA + + G I I AL P L T + ++ Sbjct: 548 HYIAECARLASPMPLFGNGDILSYEDANRAMQMGVSGIMIARGALIKPWLFTEIKEQ-RH 606 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 I + Y + + D T+ L+W+ + + ++ + Sbjct: 607 WDISSSERFEILKDFTNYGLEHWGSDTQGVEKTRKFLLEWLSFLCRYIPVGLLEH 661 >UniRef50_C9RDL3 HisA/hisF family protein n=3 Tax=Methanococcales RepID=C9RDL3_METVM Length = 229 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 92/260 (35%), Gaps = 45/260 (17%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYDITA 54 IIP +D++ V G + D + LAK Y E+G++ + D+ Sbjct: 1 MHIIPVIDIKGNIAVHGKSGMRSKYQPLKSVICETSDPICLAKSYKEKGSEMVYIADLD- 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTL 112 + G + + + + I V GIK+ ED ++ + DK I + L D L Sbjct: 60 AICGEGDNFNLIKNID---FINKIVDAGIKTREDLERVREYLNKNDKAIIATETLIDKEL 116 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 I+ V+ D T E L V++ Sbjct: 117 ISE----------------------KNIIVSLDFKDGKLLNYTVEEVLGLVRKDTP---- 150 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVRE--VCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 +++ ++ G G +++ + + + P+ GG + + + +DG L Sbjct: 151 -LIILDISSVGTGRGINMKLINMILKLNKGKNPIYVGGGIRDITDIEKC-YNLGIDGVLV 208 Query: 231 ASVFHKQIINIGELKAYLAT 250 + H+ +I++ E+ Sbjct: 209 GTAIHRGVIDLEEVIKKFEK 228 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Query: 47 LVFYDITASSDGRVVDKSWVSRVAEVIDI--PFCVAGGIKSLEDAAKILSFGADKISINS 104 L+ DI++ GR ++ ++ + ++ P V GGI+ + D K + G D + + + Sbjct: 151 LIILDISSVGTGRGINMKLINMILKLNKGKNPIYVGGGIRDITDIEKCYNLGIDGVLVGT 210 Query: 105 PALADPTLITRLADRFGVQ 123 + + +F Sbjct: 211 AIHRGVIDLEEVIKKFEKF 229 >UniRef50_B9JW92 Nitrogen regulation protein n=4 Tax=Rhizobiales RepID=B9JW92_AGRVS Length = 332 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 47/155 (30%), Gaps = 3/155 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A + GAD I IN A + + + +A + Sbjct: 88 AEAAKIAEANGADIIDINMGCPAKKVIGGYAGSALMREPEIALA--MIEATVKAVSIPVT 145 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 D + Q G I ++ + G D + + VR+ ++PL Sbjct: 146 VKMRLGWDSDSINAPDLSRRAQDAGVQAITVHGRTRMQFYEGRADWDAIAAVRDAIYIPL 205 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 IA+G T+ E R + D + + Sbjct: 206 IANGDIDTLGDAQEILRRSGADAIMLGRACQGRPW 240 Score = 89.1 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 3/96 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + I L++R + G + + T D ++ V + I IP Sbjct: 146 VKMRLGWDSDSINAP-DLSRRAQDAGVQAITVHGRTRMQFYEGRADWDAIAAVRDAIYIP 204 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPT 111 G I +L DA +IL GAD I + P Sbjct: 205 LIANGDIDTLGDAQEILRRSGADAIMLGRACQGRPW 240 >UniRef50_A8NZY7 tRNA-dihydrouridine synthase 3 n=2 Tax=Agaricales RepID=DUS3_COPC7 Length = 676 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 67/231 (29%), Gaps = 24/231 (10%) Query: 37 KRYAEEGADELVF--YDI-TASSDGRVVDKSWVSRVAEVIDIPFCVAGG-----IKSLED 88 + + GAD + + T+ G + S V R VAG + + E Sbjct: 328 RMCVKLGAD-ITCGEMGLATSFLAGSKEEWSLVRRHPSEKIFGIQVAGNKPHTLVPTAEV 386 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH-VNQYTG 147 AK G D + +N D L+ + + + + Sbjct: 387 IAKEFPTGVDFVDLNCGCPID--LVFKAGSGSALLDNAGKLGKIIQGMNRALGEIPLTVK 444 Query: 148 DESRTRVTQWETLDWVQEV-QKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC----- 200 + + + + + + A I L+ + D + +K+ Sbjct: 445 IRTGVKEGRNNAHKLMPRISAEWSASAITLHGRTRQQRYTKLADWDYIKECVAAVRAREA 504 Query: 201 -----HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 VP+ G + + + E + VDG + + E+K Sbjct: 505 DEDLPPVPIFGGGDCFSSQDYWEKINNYGVDGVMIGRGALIKPWIFTEIKE 555 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 12/117 (10%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI--- 73 VK + + AE A + + T ++ D ++ + Sbjct: 443 VKIRTGVKEGRNNAHKLMPRISAEWSASAITLHGRTRQQRYTKLADWDYIKECVAAVRAR 502 Query: 74 -------DIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGV 122 +P G S +D KI ++G D + I AL P + T + +R Sbjct: 503 EADEDLPPVPIFGGGDCFSSQDYWEKINNYGVDGVMIGRGALIKPWIFTEIKERREW 559 >UniRef50_C1ZGV0 tRNA-dihydrouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGV0_PLALI Length = 322 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 3/163 (1%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 E A I G + +N + Q I A + Sbjct: 81 EAARVIEELGFSMVDLNFECPIRRLVGRGEGGALMGQP--QRIAELVAAAKQAVSIPVTV 138 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGYDLEQLKKVREVCHVPLI 205 + + + ++ Q V++ G I+L+ + + G D + + +V+E +P++ Sbjct: 139 KLRTGPKAGEDTAVETAQRVEQAGGAAIILHARSVEQAYLGGPDWQHVTRVKEAVSIPVL 198 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 SGG T + + + DG + + L Sbjct: 199 GSGGVRTPQDAISFLESSGADGVAIGRGCLGNPWIFQQARTLL 241 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-RVVDKSWVSRVAEVIDIP 76 VK V A+R + G ++ + + D V+RV E + IP Sbjct: 138 VKLRTGPKAGEDT-AVETAQRVEQAGGAAIILHARSVEQAYLGGPDWQHVTRVKEAVSIP 196 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 +GG+++ +DA L GAD ++I L +P + + Sbjct: 197 VLGSGGVRTPQDAISFLESSGADGVAIGRGCLGNPWIFQQA 237 >UniRef50_B9JF02 tRNA-dihydrouridine synthase protein n=12 Tax=Alphaproteobacteria RepID=B9JF02_AGRRK Length = 342 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 9/158 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW---YDAETGKYHV 142 E A GAD I IN A ++ + ++ D +A V Sbjct: 96 AEAAKIAADNGADIIDINMGCPA-----KKVIGGYSGSALMRDPDHALGLIEATVKAVDV 150 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + ++ G + ++ + G D + ++ VR+V Sbjct: 151 PVTLKMRLGWDENSINAPHIARRAEEAGIQLVTIHGRTRMQFYEGRADWDAIRAVRDVIS 210 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +PL+A+G T E E R + D + + Sbjct: 211 IPLVANGDVDTPEDASEILRRSGADAVMVGRGCQGRPW 248 Score = 90.3 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 3/95 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + I +A+R E G + + T D + V +VI IP Sbjct: 155 KMRLGWDENSINAP-HIARRAEEAGIQLVTIHGRTRMQFYEGRADWDAIRAVRDVISIPL 213 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPT 111 G + + EDA++IL GAD + + P Sbjct: 214 VANGDVDTPEDASEILRRSGADAVMVGRGCQGRPW 248 >UniRef50_Q090Q9 TRNA-dihydrouridine synthase B n=2 Tax=Cystobacterineae RepID=Q090Q9_STIAU Length = 369 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 41/170 (24%), Gaps = 5/170 (2%) Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G +++ AA + GA I IN + + A Sbjct: 105 IFGGEPEAMAQAALVGKAHGAQIIDINMGCPVKKVTKNGAGSALMCEPL--RAARIVQAI 162 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKK 195 + S L E+ G + ++ +D +G D + Sbjct: 163 AEATGLPVTCKIRSGWDAHHRNYLQMAGELFSAGCAALAIHPRTRDQGYSGFADWSVIAD 222 Query: 196 VREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 ++ LI +G T D + EL Sbjct: 223 LKRHFPDRTLIGNGDVKTPADARRMRETTGCDFVMIGRGALGNPWIFREL 272 Score = 80.3 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 4/102 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP- 76 K + + + +A G L + T D S ++ + Sbjct: 173 KIRSGWDAH-HRNYLQMAGELFSAGCAALAIHPRTRDQGYSGFADWSVIADLKRHFPDRT 231 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLA 117 G +K+ DA ++ G D + I AL +P + LA Sbjct: 232 LIGNGDVKTPADARRMRETTGCDFVMIGRGALGNPWIFRELA 273 >UniRef50_UPI00016C36C9 phosphoribosylformimino-5-aminoimidazole carboxamide isomerase family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C36C9 Length = 235 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 72/241 (29%), Gaps = 23/241 (9%) Query: 13 RDGQVVKGVQFRNHEI---------IGDIVPLAKRY-AEEGADELVFYDITASSDGRVVD 62 +G VV+ V +A+ GA EL D+ + G Sbjct: 1 MNGVVVRAVGGDRKNYRPVRSPLTPSTVPTDIAQALLRSVGAGELYVADLD-AITGSARV 59 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V + E +P + G D + + P ++ Sbjct: 60 TPSVEALMEACAVPVWLDAG-TGRRDVLDWPPHQNLRPVVGFETCRVPEVLAEALLEPRQ 118 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + + +D G + GD + L + V G +++ + + Sbjct: 119 RPVAFSLDLRNGQLLGNWRAWGLAGDR--------DALALTRRVVDMGVRTLIVLDLARV 170 Query: 183 GVRNGYDLEQLKKV--REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G G ++L +V E + LIA GG T A G L AS H+ + Sbjct: 171 GTGTGAGTDELVRVIRAEFPDLDLIAGGGVRTWSDVER-LGKAGATGVLVASALHEGTLV 229 Query: 241 I 241 + Sbjct: 230 L 230 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 2/101 (1%) Query: 8 PCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWV 66 LD+R+GQ++ + D + L +R + G L+ D+ G V Sbjct: 123 FSLDLRNGQLLGNWRAWGLAGDRDALALTRRVVDMGVRTLIVLDLARVGTGTGAGTDELV 182 Query: 67 SRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 + D+ GG+++ D ++ GA + + S Sbjct: 183 RVIRAEFPDLDLIAGGGVRTWSDVERLGKAGATGVLVASAL 223 >UniRef50_Q6MRF1 Transcription regulator homolog yacF n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MRF1_BDEBA Length = 337 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 15/169 (8%), Positives = 40/169 (23%), Gaps = 3/169 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 A + G D + +N + V + Sbjct: 80 ARAAQVAEADGCDFVDLNFGCPVPKVVKKGAGSAILKDPAAVQK--MVSTVKAAIKIPLT 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + + G + ++ + G D + + V+ +P+ Sbjct: 138 IKIRTGWDANSRNATEICNIAYNEGVSWVAIHGRTRAQSYTGLADWDFIADVKANTKIPI 197 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + +G T + + DG + K + + + + Sbjct: 198 LGNGDILTPRQANLRLQQSGCDGVMIGRGCLKNPFIFMDALSLWRGEPI 246 Score = 93.4 bits (231), Expect = 6e-18, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 45/151 (29%), Gaps = 6/151 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 +K + + + EG + + T + + D +++ V IP Sbjct: 138 IKIRTGWDAN-SRNATEICNIAYNEGVSWVAIHGRTRAQSYTGLADWDFIADVKANTKIP 196 Query: 77 FCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I + A ++ G D + I L +P + + + I D D Sbjct: 197 ILGNGDILTPRQANLRLQQSGCDGVMIGRGCLKNPFIFMDALSLWRGEPI---KDVKRDY 253 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + + + +T + + Sbjct: 254 VSLFQGLQKEIVAHCDEHITGIQLRKFAAWF 284 >UniRef50_A5UNR3 ProFAR isomerase-related protein n=3 Tax=Methanobrevibacter smithii RepID=A5UNR3_METS3 Length = 229 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 93/250 (37%), Gaps = 32/250 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYD 51 M+ K +P LD++D V G + V +A + GADEL D Sbjct: 1 MIKK--VPVLDLKDNIAVSGKSGLRDTYTPLQTVFAPSANPVDIANGLSINGADELYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + +G + V V +P + G+K E L + A KI + + + Sbjct: 59 LD-LIEGNGHNIHDVKMV--NSILPVMLDAGVKDFESFTFFLDY-AYKIIVPTETIKSIG 114 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 I ++ +++ + IVV +D + ++ ++ + +++ Sbjct: 115 EIKKIFEKYPKERIVVSVDVKDNELY--------------SKNLNISLAEFKEILEELDP 160 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 EI+L + G + GY+ E L +++ LI +GG + D + L Sbjct: 161 DEIILLDITGVGTQKGYNQELLDDFKDLKD-KLIIAGGLNNKS--VSELEDMGIKKVLVG 217 Query: 232 SVFHKQIINI 241 + H + + Sbjct: 218 TALHSGEMKL 227 >UniRef50_Q1NTJ9 Histidine biosynthesis n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTJ9_9DELT Length = 186 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 69/125 (55%) Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 + G+ + + + ++ GAGEI+LN +++DG +G+DLE Sbjct: 60 FHGPNGEKYCWYQCTVKGGREGRDLDAATLAVACEELGAGEILLNCIDKDGTNSGFDLEL 119 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +K V+E +P+IAS GAG EHF E F D ALAA +FH++ + I E+K +L G Sbjct: 120 VKMVKEAVTIPVIASSGAGKPEHFSEVFTVTGADAALAAGIFHRREVAISEVKEHLQRHG 179 Query: 253 VEIRI 257 +E+R+ Sbjct: 180 IEVRL 184 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 4/109 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPF 77 VKG R + D LA E GA E++ I D V V E + IP Sbjct: 75 VKG--GREGRDL-DAATLAVACEELGAGEILLNCIDKDGTNSGFDLELVKMVKEAVTIPV 131 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 + G E +++ + GAD I+ + + I Sbjct: 132 IASSGAGKPEHFSEVFTVTGADAALAAGIFHRREVAISEVKEHLQRHGI 180 >UniRef50_Q0F181 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F181_9PROT Length = 341 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 51/169 (30%), Gaps = 3/169 (1%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 E A + GAD + IN +V A V Sbjct: 89 EAARWAVGHGADFVDINMGCPVKKICKQVAGSAMLRDEALVAR--VLAAVVAAVDVPVTL 146 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLI 205 + + + + G + ++ + + +G+ E + + +P+I Sbjct: 147 KIRTGWDDQSKNVQNIARIAEDSGIQLLTVHGRTRAQMFHGHACWEDIGLAKAAVSIPVI 206 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +G E E R ++ DG + +GE+ A +A + Sbjct: 207 GNGDIVDAESAREMIRVSNCDGVMVGRAVQGNPWVLGEVHAAIAGLPIP 255 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 38/141 (26%), Gaps = 3/141 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD-KSWVSRVAEVIDIPF 77 K + + ++ +A+ + G L + T + + + IP Sbjct: 147 KIRTGWDDQ-SKNVQNIARIAEDSGIQLLTVHGRTRAQMFHGHACWEDIGLAKAAVSIPV 205 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I E A +++ D + + +P ++ + I Sbjct: 206 IGNGDIVDAESAREMIRVSNCDGVMVGRAVQGNPWVLGEVHAAIAGLPIPPKPTAAERWL 265 Query: 137 TGKYHVNQYTGDESRTRVTQW 157 H+ ++ Sbjct: 266 IVDEHMRHLVEHHGIRTASKL 286 >UniRef50_C5WE57 tRNA-dihydrouridine synthase n=42 Tax=Streptococcus RepID=C5WE57_STRDG Length = 354 Score = 110 bits (276), Expect = 4e-23, Method: Composition-based stats. Identities = 25/221 (11%), Positives = 60/221 (27%), Gaps = 14/221 (6%) Query: 38 RYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS- 94 E GA +V I+ + + + GG E + Sbjct: 64 IAKEFGAGLVVMEMISEKGLLYNNEKTLHMLHIDENEHPMSIQLFGG--DAEGLKRAADF 121 Query: 95 ----FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 AD + IN + + ++ I T + + Sbjct: 122 IQTNTKADIVDINMGCPVNKVVKNEAGAKWLRDP--DKIYHIVKEVTSVLDIPLTVKMRT 179 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREV-CHVPLIASG 208 + ++ + G + ++ ++ + G D E L +V + +P I +G Sbjct: 180 GWADSSL-AVENALAAESAGVSALAMHGRTREQMYTGTCDHETLARVSKAITKIPFIGNG 238 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +++ + VD + ++ + Sbjct: 239 DVRSVQDAKFMIEEIGVDAVMIGRAAMNNPYLFTQINHFFE 279 Score = 90.3 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 7/121 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VD 62 K + LD+ VK + V A G L + T D Sbjct: 163 KEVTSVLDIP--LTVKMRTGWADSSL--AVENALAAESAGVSALAMHGRTREQMYTGTCD 218 Query: 63 KSWVSRVAEV-IDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRF 120 ++RV++ IPF G ++S++DA ++ G D + I A+ +P L T++ F Sbjct: 219 HETLARVSKAITKIPFIGNGDVRSVQDAKFMIEEIGVDAVMIGRAAMNNPYLFTQINHFF 278 Query: 121 G 121 Sbjct: 279 E 279 >UniRef50_D2NNX0 tRNA-dihydrouridine synthase n=3 Tax=Actinobacteridae RepID=D2NNX0_9MICC Length = 442 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 50/166 (30%), Gaps = 3/166 (1%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQ-CIVVGIDTWYDAETGKYHVNQYTGDESRT 152 AD I +N A + + I E + + Sbjct: 155 EDRADHIDLNFGCPAPKVTRRGGGAALPWKTDLFTAIVQTAVKEASRNDIPLTIKMRKGI 214 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV-CHVPLIASGGA 210 L+ + + G I L+ +G D + + ++RE+ VP++ +G Sbjct: 215 DDDHITFLESAKIARDAGVAAIALHGRTAAQHYSGKADWDSIAQLRELIPDVPILGNGDI 274 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + E + VDG + + G+L+ IR Sbjct: 275 FSAEDAVRMVEQTGVDGVVIGRGCQGRPWLFGDLQNAFEGSSERIR 320 Score = 86.8 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 4/107 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI-DI 75 +K + + + I + AK + G + + TA+ D ++++ E+I D+ Sbjct: 208 IKMRKGIDDDHIT-FLESAKIARDAGVAAIALHGRTAAQHYSGKADWDSIAQLRELIPDV 266 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFG 121 P G I S EDA +++ G D + I P L L + F Sbjct: 267 PILGNGDIFSAEDAVRMVEQTGVDGVVIGRGCQGRPWLFGDLQNAFE 313 >UniRef50_Q1NXZ7 Dihydrouridine synthase TIM-barrel protein nifR3 n=3 Tax=Deltaproteobacteria RepID=Q1NXZ7_9DELT Length = 313 Score = 110 bits (275), Expect = 5e-23, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 57/212 (26%), Gaps = 12/212 (5%) Query: 38 RYAEEGA-----DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL--EDAA 90 E GA + L + + ++ A + + G + E AA Sbjct: 31 LCREYGAGLCYSEMLSCHGLVRRQ---PATIEMLATTAAERPLLMQLFGAEPEVMGEAAA 87 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + D I IN + ++ + + S Sbjct: 88 ILSRLPIDGIDINMGCPVRKVVKKGAGAAL-MRDPELAAAITGAVTAAAGDLPVTVKIRS 146 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCHVPLIASGG 209 Q D+ + + GA + ++ DG D + V+ VP+I +G Sbjct: 147 GWNHKQINAPDFARLLVAHGAAAVTIHARTWSDGFTGRADWAVIAAVKRAVSVPVIGNGD 206 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G+ E L DG + Sbjct: 207 IGSYEQALAMMAATGCDGVMIGRGALGAPWVF 238 Score = 93.0 bits (230), Expect = 8e-18, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 3/98 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK NH+ I A+ GA + + T S D + ++ V + +P Sbjct: 142 VKIRSGWNHKQINAP-DFARLLVAHGAAAVTIHARTWSDGFTGRADWAVIAAVKRAVSVP 200 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 G I S E A +++ G D + I AL P + Sbjct: 201 VIGNGDIGSYEQALAMMAATGCDGVMIGRGALGAPWVF 238 >UniRef50_A6CBK4 Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 family protein n=2 Tax=Planctomycetaceae RepID=A6CBK4_9PLAN Length = 365 Score = 110 bits (275), Expect = 5e-23, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 59/203 (29%), Gaps = 6/203 (2%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKILSF-GADKISINSPA 106 + +G E + G + ++DAA++L G I IN Sbjct: 60 LVNARGLLEGSEKTLQLTQTCPEDSPFAVQIFGSEPQQMKDAAQLLESRGVHSIDINMGC 119 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + I + + C + + ++ + +E Sbjct: 120 PVNR--IVKGGAGASMMCRPSDTVSLVQTVVEAVKIPVSVKMRLGWDDSELSAPFFSREF 177 Query: 167 QKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDAD 224 +K G + ++ ++ G + + +++V E +P+I +G + + Sbjct: 178 EKVGVVAVAIHGRTREQGFRGVVNHDGIRRVVEAVDSIPVIGNGDVTNVAEADFMLKTTG 237 Query: 225 VDGALAASVFHKQIINIGELKAY 247 G +L + Sbjct: 238 CAGVSIGRGALANPWIFRQLVQW 260 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVID-I 75 VK + + ++ + + G + + T R V + + RV E +D I Sbjct: 157 VKMRLGWDDSELSAPF-FSREFEKVGVVAVAIHGRTREQGFRGVVNHDGIRRVVEAVDSI 215 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADR 119 P G + ++ +A +L G +SI ALA+P + +L Sbjct: 216 PVIGNGDVTNVAEADFMLKTTGCAGVSIGRGALANPWIFRQLVQW 260 >UniRef50_A6BZR9 Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZR9_9PLAN Length = 355 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 55/187 (29%), Gaps = 12/187 (6%) Query: 74 DIPFCVAGGIK-SLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + + GGI L AA+ L G + +N + ++ G I+ D Sbjct: 80 PLTIQIFGGITAELVAAARWLEQHGYAAVDLNMGCP-----MAKINGNGGGARIMCAPDA 134 Query: 132 WYD---AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 + +E ++ G I ++ ++ G Sbjct: 135 ACQLVAEVVDAVSIPVTVKMRLGWDRDSITAPLLAREFEQAGVAAITVHGRTRNQGFGGT 194 Query: 188 YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 DL+ +++ E +P+I +G T+E + ++ Sbjct: 195 VDLQGIRQTVEAVQQIPVIGNGDVCTVEDAFRMREQTGCEAVSIGRGAMLDPWIFRKISQ 254 Query: 247 YLATQGV 253 + + V Sbjct: 255 AVRDEPV 261 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 49/111 (44%), Gaps = 4/111 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVI-DI 75 VK + + I + LA+ + + G + + T + G VD + + E + I Sbjct: 152 VKMRLGWDRDSITAPL-LAREFEQAGVAAITVHGRTRNQGFGGTVDLQGIRQTVEAVQQI 210 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 P G + ++EDA ++ G + +SI A+ DP + +++ + + Sbjct: 211 PVIGNGDVCTVEDAFRMREQTGCEAVSIGRGAMLDPWIFRKISQAVRDEPV 261 >UniRef50_Q8PX79 NifR3-like protein n=3 Tax=Methanosarcina RepID=Q8PX79_METMA Length = 323 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 14/194 (7%) Query: 64 SWVSRVAEVIDIP--FCVAGGIKSLEDAAKIL-----SFGADKISINSPALADPTLITRL 116 S++ ++ D P + GG + + + + I +N A Sbjct: 59 SFIKGLSSEEDRPFGVQLVGG--CPDKLKRAALFIEEEYRPEIIDVNMGCPARCITGAGC 116 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 +V ++ + R + +TL+ + ++K GA + + Sbjct: 117 GSALLNSPELVYSIIL----ELTESLDTPVSAKIRLLGREEKTLEIARLIEKAGASAVTV 172 Query: 177 NMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + + +G +LE ++ V+ +P+IA+G E DG + Sbjct: 173 HGRTAAQMYSGNSNLEGIRAVKNELSIPVIANGDVKDEESAERTLELTGCDGLMIGRAAM 232 Query: 236 KQIINIGELKAYLA 249 +++ YL Sbjct: 233 GNPFIFKKIRHYLE 246 Score = 99.2 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 2/94 (2%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 + +A+ + GA + + TA+ + + V + IP G +K E Sbjct: 153 EKTLEIARLIEKAGASAVTVHGRTAAQMYSGNSNLEGIRAVKNELSIPVIANGDVKDEES 212 Query: 89 AAKILS-FGADKISINSPALADPTLITRLADRFG 121 A + L G D + I A+ +P + ++ Sbjct: 213 AERTLELTGCDGLMIGRAAMGNPFIFKKIRHYLE 246 >UniRef50_C2KYD0 Dihydrouridine synthase n=4 Tax=Bacteria RepID=C2KYD0_9FIRM Length = 344 Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats. Identities = 20/171 (11%), Positives = 49/171 (28%), Gaps = 4/171 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + + A + D I +N + + + A+ K Sbjct: 108 MAEMACRIEEDFDGIDVNMGCPVPKVVRNQEGSALMTNLPLAEQVLSTMAKALKK--PLT 165 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 +++ + + G + ++ ++ G + + +K+ +E +P+ Sbjct: 166 VKFRIGFTDDAINVVEFAKMAEASGVASVTIHGRTREQYYRGKANWQYIKEAKEAVKIPV 225 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL-ATQGVE 254 +G E L VDG A I + L + + Sbjct: 226 FGNGDIFQEEDALAMLLSTGVDGVALARGIQGNPFLIRACVSLLSEGKKLP 276 Score = 94.5 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 3/103 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 ++ VK ++V AK G + + T R + ++ Sbjct: 160 LKKPLTVKFRIGFTD-DAINVVEFAKMAEASGVASVTIHGRTREQYYRGKANWQYIKEAK 218 Query: 71 EVIDIPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTL 112 E + IP G I EDA + LS G D +++ +P L Sbjct: 219 EAVKIPVFGNGDIFQEEDALAMLLSTGVDGVALARGIQGNPFL 261 >UniRef50_A5FL15 tRNA-dihydrouridine synthase B-like protein n=14 Tax=Bacteroidetes RepID=A5FL15_FLAJ1 Length = 332 Score = 109 bits (274), Expect = 7e-23, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 69/225 (30%), Gaps = 19/225 (8%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI-----PF---CVAGGIKSLED 88 + GAD + + + + + +DI P G +++E Sbjct: 31 RLCKTHGADMMY----SEFISSEGLIRDAIKS-RMKLDIFDYERPVGIQIFGGDEEAMEM 85 Query: 89 AAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 ++KI+S D + IN + V + A + Sbjct: 86 SSKIVSTVKPDLVDINFGCPVKKVVCRGAGAGVL--KDVDLMVRLTKAVIKGTDLPVTVK 143 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHV--PL 204 + + + +Q G + ++ + + G+ D + +V+ + P+ Sbjct: 144 TRLGWDESSINIDEVAERLQDIGVQALTIHARTRAQMYKGHSDWSHIARVKNNPRITMPI 203 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +G + E L+ + +DG + E+K Y Sbjct: 204 FGNGDIDSPEKALQYKNEYGIDGIMIGRAAIGYPWIFNEIKHYFK 248 Score = 92.2 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDI- 75 VK + I +I +A+R + G L + T + + D S ++RV I Sbjct: 142 VKTRLGWDESSI-NIDEVAERLQDIGVQALTIHARTRAQMYKGHSDWSHIARVKNNPRIT 200 Query: 76 -PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 P G I S E A + +G D I I A+ P + + F + Sbjct: 201 MPIFGNGDIDSPEKALQYKNEYGIDGIMIGRAAIGYPWIFNEIKHYFKTGEHLPAP---- 256 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + + ++ + Sbjct: 257 TVIDRVEAARNHLKWSMEWKGERLGIVEMRRHYTNY 292 >UniRef50_Q96G46 tRNA-dihydrouridine synthase 3-like n=17 Tax=Coelomata RepID=DUS3L_HUMAN Length = 650 Score = 109 bits (273), Expect = 9e-23, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 69/219 (31%), Gaps = 14/219 (6%) Query: 37 KRYAEEGAD----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAK 91 + GAD E+ T G++ + + + R + G ++ A+ Sbjct: 322 RICKRFGADVTCGEMAV--CTNLLQGQMSEWALLKRHQCEDIFGVQLEGAFPDTMTKCAE 379 Query: 92 ILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 +LS D + IN D L+ + + V Sbjct: 380 LLSRTVEVDFVDINVGCPID--LVYKKGGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIR 437 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIAS 207 + + + E++ G + L+ +++ D + +++ + +PL + Sbjct: 438 TGVQERVNLAHRLLPELRDWGVALVTLHGRSREQRYTKLADWQYIEECVQAASPMPLFGN 497 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G + E A + V G + A + E+K Sbjct: 498 GDILSFEDANRAMQ-TGVTGIMIARGALLKPWLFTEIKE 535 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 14/167 (8%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITASS-DGRVVDK 63 LDV VK V LA R + G + + + ++ D Sbjct: 427 VLDVP--LTVKIRTGVQER-----VNLAHRLLPELRDWGVALVTLHGRSREQRYTKLADW 479 Query: 64 SWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 ++ + +P G I S EDA + + G I I AL P L T + ++ Sbjct: 480 QYIEECVQAASPMPLFGNGDILSFEDANRAMQTGVTGIMIARGALLKPWLFTEIKEQ-RH 538 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 I + Y + + D T+ L+W+ + + Sbjct: 539 WDISSSERLDILRDFTNYGLEHWGSDTQGVEKTRRFLLEWLSFLCRY 585 >UniRef50_C0QKE4 Dhs2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKE4_DESAH Length = 330 Score = 109 bits (273), Expect = 9e-23, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 55/177 (31%), Gaps = 5/177 (2%) Query: 78 CVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 S+ +AA+ ++ AD I IN T + A Sbjct: 71 IFGAEALSMANAARWIAERNVADIIDINFGCSVKKVARTGAGVAL--MKDMDNARAIIRA 128 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 + S + + D + + G I ++ G D + Sbjct: 129 VRRAVSMPFTIKIRSGWDSSASQAFDIARMAEDNGVDAIAIHPRTAAQGFRGRADWSMIA 188 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +++E+ +P+I +G T E + ++ DG + G ++A L + Sbjct: 189 RLKEMLTIPVIGNGDITTPEQGVAMIQETGCDGVMVGRAAMGNPFIFGGIEALLRGE 245 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 57/167 (34%), Gaps = 5/167 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 +K + +A+ + G D + + TA+ R D S ++R+ E++ IP Sbjct: 139 IKIRSGWDSS-ASQAFDIARMAEDNGVDAIAIHPRTAAQGFRGRADWSMIARLKEMLTIP 197 Query: 77 FCVAGGIKSLED-AAKILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWY 133 G I + E A I G D + + A+ +P + R ++ + Sbjct: 198 VIGNGDITTPEQGVAMIQETGCDGVMVGRAAMGNPFIFGGIEALLRGEAWNEPSPMEIFQ 257 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 E Y G+ R+ + +V+ L + Sbjct: 258 IMEEMVESHVAYLGERPACRMMRSRLAWFVKGFAGASVFRRELTGIE 304 >UniRef50_B8GCQ5 TIM-barrel protein, nifR3 family n=6 Tax=Chloroflexi (class) RepID=B8GCQ5_CHLAD Length = 351 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 48/165 (29%), Gaps = 3/165 (1%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 A + GAD I IN + ++ A + Sbjct: 99 AARVVEQLGADIIDINCGCPSPKVTGGGHGSALLRDL--PKMERLLRAVRAAVQIPVTLK 156 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 + ++ Q + G + L+ ++ G D ++ ++ +P+I Sbjct: 157 LRAGWDEASLNFIEAGQRAEAAGVAALTLHPRTREQGYKGQADWSRVAALKRAVSIPVIG 216 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 SG T + L RD+ DG + ++ + Sbjct: 217 SGDVVTAQDALIRLRDSGADGVMIGRGAIANPWIFRQVADLRQGR 261 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 3/101 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + + + +R G L + T + D S V+ + + IP Sbjct: 156 KLRAGWDEASL-NFIEAGQRAEAAGVAALTLHPRTREQGYKGQADWSRVAALKRAVSIPV 214 Query: 78 CVAGGIKSLEDAA-KILSFGADKISINSPALADPTLITRLA 117 +G + + +DA ++ GAD + I A+A+P + ++A Sbjct: 215 IGSGDVVTAQDALIRLRDSGADGVMIGRGAIANPWIFRQVA 255 >UniRef50_D2U2K4 tRNA-dihydrouridine synthase B n=1 Tax=Arsenophonus nasoniae RepID=D2U2K4_9ENTR Length = 458 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 55/184 (29%), Gaps = 14/184 (7%) Query: 82 GIKSLE-----------DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 GI+S++ A ++ GA I IN A I+ Sbjct: 94 GIRSVQIAGSDPDEMATAARINVANGAQIIDINMGCPAKKVNRKLAGSALLRYP--ELIE 151 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD- 189 A V + + + Q ++ G + ++ + + NG Sbjct: 152 KILLAVVNAVDVPVTLKVRTGWSPEERNCIKIAQLAERCGIQAVTIHGRTRACLFNGAAE 211 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + ++ ++ +P+IA+G D + + E++ YL Sbjct: 212 YDSIRAAKQNVTIPIIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLE 271 Query: 250 TQGV 253 T + Sbjct: 272 TGEL 275 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 39/127 (30%), Gaps = 3/127 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + E + + +A+ G + + T + + + + + IP Sbjct: 168 KVRTGWSPE-ERNCIKIAQLAERCGIQAVTIHGRTRACLFNGAAEYDSIRAAKQNVTIPI 226 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I A +L GAD + I A P + + ++ + Sbjct: 227 IANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLETGELLPPMPIAEVQC 286 Query: 137 TGKYHVN 143 + HV Sbjct: 287 LMQAHVK 293 >UniRef50_A6C0W3 HisA/HisF family protein, putative n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C0W3_9PLAN Length = 247 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 79/248 (31%), Gaps = 22/248 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEE-GADELVFYDIT 53 +IIP LD+ + +V+G+ + + +A+ +E G E D+ Sbjct: 1 MKIIPVLDILNQTIVRGIAGQRETYQPIQSGLTHSSQPLDIAQALQDEFGFSEFYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A R+ + + + + G+ D+ + I L P + Sbjct: 61 AILQQRL-NLQMYQCLLDAGFTFL-LDCGLHFAGDSQPLSKMKGITIVAGLETLESPQEL 118 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 +L +G V +D K + L+ + ++G + Sbjct: 119 KQLVQNWGAASTVFSLD-------LKQGKPVRNSSSDNPYAAIDDPLEIAELSLQQGVNQ 171 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVRE--VCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 ++L + G G E L + + LI GG +++ D L A Sbjct: 172 MILLDLANVGTGQGTGTEALCRTLRSHHPDLRLITGGGIHSIDDLQTQAEQ-GADAVLVA 230 Query: 232 SVFHKQII 239 S H + Sbjct: 231 SALHDGRL 238 >UniRef50_B3RKU4 Putative uncharacterized protein n=2 Tax=Metazoa RepID=B3RKU4_TRIAD Length = 581 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 7/200 (3%) Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLEDAAKILSF--GADKISINSPALA 108 T G+ + + V R V G +L ++ ++ D + +N Sbjct: 269 CTNLLQGQQSEWALVKRHESEDLFGLQVCGAWPDTLARLSEYINDRVNVDFVDLNLGCPI 328 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 D + + + V + + + ++++ Sbjct: 329 DLVFHQGAGSALMGR--ANKLQQIVTGMSSILSVPLTVKLRTGILAKKSTAHKLIPQIRE 386 Query: 169 RGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVD 226 GA + L+ +++ D + + +PLI +G + E +LE + +V Sbjct: 387 WGASLVTLHGRSREQRYTKLADWSYINECATAADPMPLIGNGDILSFEDYLEHMNNTNVA 446 Query: 227 GALAASVFHKQIINIGELKA 246 G + A + E+K Sbjct: 447 GVMIARGALIKPWLFTEIKE 466 Score = 83.0 bits (204), Expect = 9e-15, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 5/155 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVID-I 75 VK + L + E GA + + + ++ D S+++ A D + Sbjct: 364 VKLRTGILAKKST-AHKLIPQIREWGASLVTLHGRSREQRYTKLADWSYINECATAADPM 422 Query: 76 PFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P G I S ED + + + I AL P L T + +R I + Sbjct: 423 PLIGNGDILSFEDYLEHMNNTNVAGVMIARGALIKPWLFTEIKER-RHWDISANERFEFL 481 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + Y + + D T+ L+W+ + + Sbjct: 482 RKYVNYGLEHWGSDSLGVEKTRRFLLEWLSFLHRY 516 >UniRef50_Q54XQ6 tRNA-dihydrouridine synthase 1-like protein n=1 Tax=Dictyostelium discoideum RepID=Q54XQ6_DICDI Length = 435 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 53/161 (32%), Gaps = 7/161 (4%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AAK + D I +N +G + + H+ Sbjct: 123 KAAKYIEDHCDAIDLNLGCPQQIARRG----NYGSFLLDKPHIILPIVQELHKHIKVPIF 178 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPL 204 + R +T+ ++Q+ G + ++ ++ + + + ++ +RE +P+ Sbjct: 179 CKIRLLPNLDDTIKLALQLQEAGCQLLTIHGRTKEQKGHNSGIANWKAIRTIREQLSIPV 238 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 IA+G E + DG ++A LK Sbjct: 239 IANGSVVQYEDIDRCLEETGADGVMSAEGILANPSFFSGLK 279 Score = 89.5 bits (221), Expect = 9e-17, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 4/93 (4%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFCVAGGIKS 85 + D + LA + E G L + T G + + + E + IP G + Sbjct: 187 LDDTIKLALQLQEAGCQLLTIHGRTKEQKGHNSGIANWKAIRTIREQLSIPVIANGSVVQ 246 Query: 86 LEDAAKIL-SFGADKISINSPALADPTLITRLA 117 ED + L GAD + LA+P+ + L Sbjct: 247 YEDIDRCLEETGADGVMSAEGILANPSFFSGLK 279 >UniRef50_C0W327 Dihydrouridine synthase n=2 Tax=Actinomyces RepID=C0W327_9ACTO Length = 438 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 52/186 (27%), Gaps = 17/186 (9%) Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQC---------I 125 P + A ++ AD I +N + + Sbjct: 128 PVIAG------KAARILVEEDLADHIDLNFGCPVPKVTRKGGGAALPWKKDLLHAILREV 181 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 V G + + V LD + Q G + L+ Sbjct: 182 VRGAEEGVRLGRREREVPVTVKMRIGVDEEHETYLDAARAAQDAGVAALALHGRTARQHY 241 Query: 186 NG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 G D + +++E C +P++ +G T H LE R DG + + ++ Sbjct: 242 AGKADWSAIARLKEACRIPVLGNGDTWTGSHALEMMRQTGCDGVVVGRGCQGRPWLFADI 301 Query: 245 KAYLAT 250 L+ Sbjct: 302 VHALSG 307 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 3/106 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIP 76 VK + E + A+ + G L + T D S ++R+ E IP Sbjct: 202 VKMRIGVDEE-HETYLDAARAAQDAGVAALALHGRTARQHYAGKADWSAIARLKEACRIP 260 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFG 121 G + A +++ G D + + P L + Sbjct: 261 VLGNGDTWTGSHALEMMRQTGCDGVVVGRGCQGRPWLFADIVHALS 306 >UniRef50_A2CB98 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus str. MIT 9303 RepID=A2CB98_PROM3 Length = 266 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 102/260 (39%), Gaps = 13/260 (5%) Query: 1 MLAKRIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYA----EEGADELVFYDITA 54 M KRII L D + + FR E +GD L + Y DEL+ D++ Sbjct: 1 MPKKRIIFTLLYDSQSEHFLLSRNFRVQE-VGDYNWLKENYDFTNLSYYIDELLVIDVSR 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 S + +++ +P GG+ SL+ A + GADK+ +N+ +P LI Sbjct: 60 KKRNSQRFCSMLKKLSSDCFLPIGAGGGLDSLDKAKMLFDSGADKLILNTSVYENPELIK 119 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 L +G Q I+ +D + ++ + + + GE+ Sbjct: 120 ALNKFYGQQAIIASVDIKKNELGIFDIYTHNGTKKASSLKDYQNII-----CKNEWIGEL 174 Query: 175 VLNMMNQDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 LN M +DG GYD LK P+I +GGAG H +E VD A + Sbjct: 175 YLNSMERDGTGQGYDFNMLKSFTNLNKKHPIILAGGAGKTSHIVEGLLTDGVDACATAHL 234 Query: 234 FHKQIINIGELKAYLATQGV 253 F+ + + + G+ Sbjct: 235 FNFIGDKLAKTRCIAKANGI 254 >UniRef50_B9ZKT6 TIM-barrel protein, nifR3 family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKT6_9GAMM Length = 330 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 3/170 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A + + GAD I +N A + + A V Sbjct: 81 AEAARENVRRGADVIDLNLGCPAKKVCSKAAGSALLGEP--ERVRELLTALVESVEVPVT 138 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + Q G + ++ + G D E + +V +P+ Sbjct: 139 LKMRLGLDRERVNAETIAGIAQDCGIAMLTVHGRTRADAYRGTADYEAIARVVRAVSIPV 198 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +A+G + A + G + + G+++A LA + V Sbjct: 199 LANGDVVDIGSARRALAISGATGLMIGRGAQGRPWLPGQIRASLAGEPVP 248 Score = 80.7 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 3/115 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + E + + +A + G L + T + R D ++RV + IP Sbjct: 140 KMRLGLDRERV-NAETIAGIAQDCGIAMLTVHGRTRADAYRGTADYEAIARVVRAVSIPV 198 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 G + + A + L+ GA + I A P L ++ + + Sbjct: 199 LANGDVVDIGSARRALAISGATGLMIGRGAQGRPWLPGQIRASLAGEPVPADPAW 253 >UniRef50_D2R6Z1 TIM-barrel protein, nifR3 family n=3 Tax=Planctomycetaceae RepID=D2R6Z1_9PLAN Length = 345 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 61/224 (27%), Gaps = 14/224 (6%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI-DIPFCV-AGGIKSLEDAAKIL- 93 + G L + + V E + + +L + L Sbjct: 44 EMVNASGFAWLH--------EHEAEHPDRLWGVKEEARPLAVQMWDNDPATLAKVGERLA 95 Query: 94 -SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + IN + + ++ Sbjct: 96 NELHVSVVDINFGCPVKDVTEKAHSGSYLLKFPDRIAQIVERVVKACAPTPVTAKIRLGC 155 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGA 210 ++ + V+ GA + ++ G D ++ +++ +PLI +G Sbjct: 156 SRDAINAIEIAKVVESAGAAALTVHGRTAADFFRGTADWNRIAEIKPHLKKIPLIGNGDL 215 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + E +EAFR VDG + A + + A L + V Sbjct: 216 DSPEKVIEAFRRYGVDGVMIARASMGRPWLFRQAAAALRGEPVP 259 Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 4/110 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI-DIP 76 K + + +AK GA L + TA+ R D + ++ + + IP Sbjct: 150 KIRLGC-SRDAINAIEIAKVVESAGAAALTVHGRTAADFFRGTADWNRIAEIKPHLKKIP 208 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCI 125 G + S E + +G D + I ++ P L + A + + Sbjct: 209 LIGNGDLDSPEKVIEAFRRYGVDGVMIARASMGRPWLFRQAAAALRGEPV 258 >UniRef50_B5X496 tRNA-dihydrouridine synthase 3-like n=3 Tax=Eukaryota RepID=B5X496_SALSA Length = 654 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 81/254 (31%), Gaps = 22/254 (8%) Query: 12 VRDGQVVKGVQ-FRNHEIIGDIVPLA-----------KRYAEEGADELV--FYDITASSD 57 + D V+K Q + D + LA + GAD T Sbjct: 289 LTDADVIKLRQCEKKQVDFKDKLYLAPLTTCGNLPFRRICKRFGADITCGEMAMCTNLLQ 348 Query: 58 GRVVDKSWVSRVAEVIDIPFCV-AGGIKSLEDAAKILSFG--ADKISINSPALADPTLIT 114 G+ + + + R V ++ A++L+ D + INS D L+ Sbjct: 349 GQSSEWALLKRHESEDLFGVQVEGCFPDTMTRCAELLNNKIDVDFVDINSGCPID--LVY 406 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + G+ + V + + + E++K G I Sbjct: 407 KKGGGCGLMTRTNKFEQIIRGMNSVLDVPLTVKIRTGVQEKANIAHKLIPEMKKWGVSMI 466 Query: 175 VLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 L+ +++ D + + + +PL +G + ++A R+ DV G + A Sbjct: 467 TLHGRSREQRYTKSADWDYINTCSQLASPIPLFGNGDILSYYDAMKA-RETDVSGIMLAR 525 Query: 233 VFHKQIINIGELKA 246 + E+K Sbjct: 526 GALIKPWVFTEIKE 539 Score = 85.7 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 14/167 (8%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITASS-DGRVVDK 63 LDV VK + +A + + G + + + + D Sbjct: 431 VLDVP--LTVKIRTGVQEK-----ANIAHKLIPEMKKWGVSMITLHGRSREQRYTKSADW 483 Query: 64 SWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 +++ ++ IP G I S DA K I + AL P + T + +R Sbjct: 484 DYINTCSQLASPIPLFGNGDILSYYDAMKARETDVSGIMLARGALIKPWVFTEIKER-RD 542 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 I + Y + + D T+ L+W+ + + Sbjct: 543 WDISSSERLDVLRDFTHYGLEHWGSDTQGLEKTRNFLLEWLSFMCRY 589 >UniRef50_O95620 tRNA-dihydrouridine synthase 4-like n=40 Tax=Metazoa RepID=DUS4L_HUMAN Length = 317 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 4/172 (2%) Query: 74 DIPFCV---AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 D P V A + L DAA+I+ A+ I IN + + + D Sbjct: 81 DCPLIVQFAANDARLLSDAARIVCPYANGIDINCGCPQR-WAMAEGYGACLINKPELVQD 139 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 + R T+D Q+ + G I ++ + Sbjct: 140 MVKQVRNQVETPGFSVSIKIRIHDDLKRTVDLCQKAEATGVSWITVHGRTAEERHQPVHY 199 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +K ++E +P+IA+G +++ +R DG + A Sbjct: 200 DSIKIIKENMSIPVIANGDIRSLKEAENVWRITGTDGVMVARGLLANPAMFA 251 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 5/146 (3%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 ++ R H+ + V L ++ G + + TA + V + + E + IP Sbjct: 156 SIKIRIHDDLKRTVDLCQKAEATGVSWITVHGRTAEERHQPVHYDSIKIIKENMSIPVIA 215 Query: 80 AGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL----ADRFGVQCIVVGIDTWYD 134 G I+SL++A + G D + + LA+P + + Sbjct: 216 NGDIRSLKEAENVWRITGTDGVMVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPY 275 Query: 135 AETGKYHVNQYTGDESRTRVTQWETL 160 ++ + SR + L Sbjct: 276 MCFHQHLMYMMEKITSRQEKRVFNAL 301 >UniRef50_O67533 Probable tRNA-dihydrouridine synthase n=1 Tax=Aquifex aeolicus RepID=DUS_AQUAE Length = 316 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 61/182 (33%), Gaps = 9/182 (4%) Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-----SFGADKISINSPALADPTLITRLADRFGVQCI 125 E I V G + E+ A+ D I IN L + A + +QC Sbjct: 58 EERPIHIQVFG--SNPEEIAQASVVIAKELKPDFIDINFGCSVPKVLRNKAA-GYMLQCP 114 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + + + + R + E V+E+QK G I ++ Sbjct: 115 PLMGEVVKETVEALKPYGIPVSAKIRLGFEKDEVERIVEELQKAGVSLIAIHARTAKQGF 174 Query: 186 NG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 +G ++K+ ++V VP+I SG + F + + DG + E Sbjct: 175 SGKALWHRIKEAKKVASVPIIGSGDVKSWRDIERMFEETECDGVMVGRAALSNPWIFKEF 234 Query: 245 KA 246 K Sbjct: 235 KE 236 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 5/103 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + IV + G + + TA + +V +P Sbjct: 138 KIRLGFEKDEVERIVE---ELQKAGVSLIAIHARTAKQGFSGKALWHRIKEAKKVASVPI 194 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADR 119 +G +KS D ++ D + + AL++P + ++ Sbjct: 195 IGSGDVKSWRDIERMFEETECDGVMVGRAALSNPWIFKEFKEK 237 >UniRef50_P44965 tRNA-dihydrouridine synthase B n=20 Tax=Pasteurellaceae RepID=DUSB_HAEIN Length = 330 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 18/169 (10%), Positives = 49/169 (28%), Gaps = 3/169 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + AA + +GA I IN A ++ +V Sbjct: 80 AQAAAINVEYGAQIIDINMGCPAKKVNRKLAGSALLQFP--DLVEKILREVVSAVNVPVT 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + + + + ++ G + ++ + + G + + +K V++ +P+ Sbjct: 138 LKIRTGWDKSNRNCVQIGKIAEQCGIQALTVHGRTRACLFEGEAEYDNIKAVKQAIAIPV 197 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 IA+G + D + ++ + + Sbjct: 198 IANGDIDSARKAKFVLNYTGADAIMIGRAALGNPWLFQAVENLIEHNSI 246 Score = 89.1 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 3/113 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + + V + K + G L + T + + + V + I IP Sbjct: 139 KIRTGWDKSN-RNCVQIGKIAEQCGIQALTVHGRTRACLFEGEAEYDNIKAVKQAIAIPV 197 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 G I S A +L+ GAD I I AL +P L + + I Sbjct: 198 IANGDIDSARKAKFVLNYTGADAIMIGRAALGNPWLFQAVENLIEHNSISQMP 250 >UniRef50_B1LWM8 TIM-barrel protein, nifR3 family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LWM8_METRJ Length = 341 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 69/220 (31%), Gaps = 6/220 (2%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK---SLEDAAKIL 93 + GAD ++ + A R ++ + +D+ G + E A Sbjct: 41 RIARRCGADAVISEMVAAREFTRGSGEATLRAEGSGVDLHVVQLAGCEAGPMAEAARLAE 100 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + GAD I +N A ++T +A + + + + G + Sbjct: 101 AGGADVIDVNMGCPAK--IVTGIASGSALMRDLDHAERLLASVRGAVSIPVTVKMRLGWD 158 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 D ++ G + ++ + G D ++ V +P+IA+G Sbjct: 159 DASRNAADLAARAERLGLNAVTVHGRTRQQFYKGRADWAAIRAVVAAVSIPVIANGDVTD 218 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + G + + +G++ A L + Sbjct: 219 FASARACLDASGAAGVMIGRAATGRPWLVGQVAAALTGRP 258 Score = 77.2 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 42/155 (27%), Gaps = 5/155 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + LA R G + + + T D + + V + IP Sbjct: 151 VKMRLGWDDA-SRNAADLAARAERLGLNAVTVHGRTRQQFYKGRADWAAIRAVVAAVSIP 209 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + A L GA + I A P L+ ++A + + A Sbjct: 210 VIANGDVTDFASARACLDASGAAGVMIGRAATGRPWLVGQVAAALTGRPAAEPSRSEQAA 269 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + + + + G Sbjct: 270 LAAE--HYAGLLSLYGRDMGVRHARKHLAAYAETG 302 >UniRef50_A8J121 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J121_CHLRE Length = 368 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 46/169 (27%), Gaps = 3/169 (1%) Query: 86 LEDAAKIL--SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 LE A ++L G + +N ++ + Sbjct: 63 LEQAVRLLVCEHGVQHVDLNFGCPVRKITARGGGSALPLRPRLFAKLVAAAVAGAGGEAP 122 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGYDLEQLKKVREVCHV 202 L + + GA +VL+ D + + D ++ + E + Sbjct: 123 VTVKFRVGLTPELPTHLQAGRIAEAEGAAALVLHARTADQLYASPVDWAAVRALVEAVRI 182 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 P++ +G L R+ G + + E+ A L Sbjct: 183 PVVGNGDVFEGADALRLLRETGCAGVMVGRAAVGRPWVFDEVAAALTGA 231 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 43/135 (31%), Gaps = 2/135 (1%) Query: 37 KRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-S 94 + EGA LV + TA VD + V + E + IP G + DA ++L Sbjct: 143 RIAEAEGAAALVLHARTADQLYASPVDWAAVRALVEAVRIPVVGNGDVFEGADALRLLRE 202 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 G + + A+ P + +A H Sbjct: 203 TGCAGVMVGRAAVGRPWVFDEVAAALTGAPPPPPPRLGEVVAAALRHAEMEVDWYRGYHD 262 Query: 155 TQWETLDWVQEVQKR 169 ++ +TL ++ K Sbjct: 263 SERDTLLRFRKFIKL 277 >UniRef50_A0EG06 Chromosome undetermined scaffold_94, whole genome shotgun sequence n=4 Tax=Intramacronucleata RepID=A0EG06_PARTE Length = 360 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 60/163 (36%), Gaps = 8/163 (4%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA ++ D I IN +G + + K ++N Sbjct: 89 KAALMIQDQCDAIDINLGCPQGIAR----KGLYGAYLLEKREQVLTIVKELKQNINVPVT 144 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPL 204 + R + TLD +++Q+ G + ++ ++ + D + +++++ +P+ Sbjct: 145 CKIRMFKDRKRTLDLTKDIQEAGCSILTVHGRTKEQNKDFVGQCDWTIIAEIKQILQIPV 204 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG-ELKA 246 A+GG T ++ VD +++ + E+K Sbjct: 205 FANGGIYTWSDVERCLQETKVDAVMSSEALLENPALFSGEIKD 247 Score = 78.0 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 4/96 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFC 78 + R + + L K E G L + T + D + ++ + +++ IP Sbjct: 146 KIRMFKDRKRTLDLTKDIQEAGCSILTVHGRTKEQNKDFVGQCDWTIIAEIKQILQIPVF 205 Query: 79 VAGGIKSLEDAAKIL-SFGADKISINSPALADPTLI 113 GGI + D + L D + + L +P L Sbjct: 206 ANGGIYTWSDVERCLQETKVDAVMSSEALLENPALF 241 >UniRef50_Q91XI1 tRNA-dihydrouridine synthase 3-like n=12 Tax=Chordata RepID=DUS3L_MOUSE Length = 637 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 14/219 (6%) Query: 37 KRYAEEGAD----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAK 91 + GAD E+ T G++ + + + R + G ++ A+ Sbjct: 309 RICKRFGADVTCGEMAV--CTNLLQGQMSEWALLKRHPCEDIFGVQLEGAFPDTMTKCAE 366 Query: 92 ILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 +L+ D + IN D L+ + + G V Sbjct: 367 LLNRTIDVDFVDINVGCPID--LVYKKGGGCALMNRSAKFQQIVRGVNGVLDVPLTVKMR 424 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIAS 207 + + + E++ G + L+ +++ D +++ + +PL + Sbjct: 425 TGVQERVSLAHRLLPELRDWGVALVTLHGRSREQRYTRLADWPYIEQCAKVASPMPLFGN 484 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G + E V G + A + E+K Sbjct: 485 GDILSFEDA-NCAMQTGVAGIMVARGALLKPWLFTEIKE 522 Score = 93.0 bits (230), Expect = 8e-18, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 14/167 (8%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITASS-DGRVVDK 63 LDV VK V LA R + G + + + R+ D Sbjct: 414 VLDVP--LTVKMRTGVQER-----VSLAHRLLPELRDWGVALVTLHGRSREQRYTRLADW 466 Query: 64 SWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 ++ + A+ +P G I S EDA + G I + AL P L T + ++ Sbjct: 467 PYIEQCAKVASPMPLFGNGDILSFEDANCAMQTGVAGIMVARGALLKPWLFTEIKEQ-RH 525 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 I + Y + + D T+ L+W+ + + Sbjct: 526 WDISSSERLDILRDFTHYGLEHWGSDTQGVERTRRFLLEWLSFLCRY 572 >UniRef50_C6XJQ7 Dihydrouridine synthase DuS n=2 Tax=Hyphomonadaceae RepID=C6XJQ7_HIRBI Length = 337 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 3/169 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A S GAD I IN + + + E G + Sbjct: 81 YEAARISASAGADIIDINMGCPSRQVTGGQSGAALMRDLDLARELIIAAREGG--GLPVS 138 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + ++ I ++ + G D ++K+V+ ++PL Sbjct: 139 VKMRLGWDDDTLNAPALAKICEEEHVKLITVHGRTRCQFYTGKADWNKVKEVKLASNLPL 198 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 I +G + + +A + DG + + +G++ + LA + Sbjct: 199 IVNGDIDSSKTAKQAILLSQADGVMIGRAALGRPWLLGKIASDLANRPY 247 Score = 88.0 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 3/111 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + LAK EE + + T D + V V ++P Sbjct: 139 VKMRLGWDDDTLNAPA-LAKICEEEHVKLITVHGRTRCQFYTGKADWNKVKEVKLASNLP 197 Query: 77 FCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRLADRFGVQCIV 126 V G I S + A + L AD + I AL P L+ ++A + + Sbjct: 198 LIVNGDIDSSKTAKQAILLSQADGVMIGRAALGRPWLLGKIASDLANRPYI 248 >UniRef50_Q6MNE9 Nitrogen regulation protein nifR3 n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNE9_BDEBA Length = 352 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 2/165 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E +++ +GA+ I IN L + V+ Sbjct: 90 AESVKRLVEWGAEAIDINMGCPVQKALKHNYGVALMGDPAYAAEVVRMTVKNSTVPVSVK 149 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + E L +V +++ GA + L+ R G D EQ+K++ + P+ Sbjct: 150 LRAV-GSTKEFDELLTFVSGLRQSGAAWVCLHPRTAAQKRRGNADWEQIKQLHKAVDFPV 208 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 I +G T + + ++ D A+A + + +L L Sbjct: 209 IGNGDVQTYDDAINMLKETGCDMAMAGRGLAARPWMMWQLGEELG 253 Score = 83.8 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 2/111 (1%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + + +++ + GA + + TA+ R D + ++ + +D P Sbjct: 148 VKLRAVGSTKEFDELLTFVSGLRQSGAAWVCLHPRTAAQKRRGNADWEQIKQLHKAVDFP 207 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIV 126 G +++ +DA +L G D A P ++ +L + G Sbjct: 208 VIGNGDVQTYDDAINMLKETGCDMAMAGRGLAARPWMMWQLGEELGFAPPA 258 >UniRef50_B7PPV8 tRNA-dihydrouridine synthase, putative n=1 Tax=Ixodes scapularis RepID=B7PPV8_IXOSC Length = 483 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 51/157 (32%), Gaps = 7/157 (4%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 A++++ + +N P I R +G + V+ Sbjct: 89 QASRLVVGHCCAVDLNLGC---PQAIARAGH-YGAFLQDDWDLLARMVQRVHTQVDVPIT 144 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPL 204 + R +T+ + Q ++ G + ++ ++ E ++ V+ +P+ Sbjct: 145 CKVRVFPEVEKTVRYAQMLEAAGCQVLTVHGRTREQKGPHTGLASWEHIRAVKRSVKIPV 204 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 IA+G +E R+ D ++A Sbjct: 205 IANGNIQYLEDAERCLRETGADAVMSAEGHLHNPYLF 241 Score = 98.4 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 47/147 (31%), Gaps = 5/147 (3%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKS 85 + V A+ G L + T G + + V + IP G I+ Sbjct: 153 VEKTVRYAQMLEAAGCQVLTVHGRTREQKGPHTGLASWEHIRAVKRSVKIPVIANGNIQY 212 Query: 86 LEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 LEDA + L GAD + L +P L T + +V Sbjct: 213 LEDAERCLRETGADAVMSAEGHLHNPYLFTGRLAPVWEASLEYLCLVRDHPCPA-SYVRG 271 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGA 171 + +T E +D +++ K A Sbjct: 272 HLFKLMHHCLTMAENVDLREKLAKASA 298 >UniRef50_Q7PVV7 AGAP009171-PA (Fragment) n=3 Tax=Endopterygota RepID=Q7PVV7_ANOGA Length = 599 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 29/243 (11%), Positives = 66/243 (27%), Gaps = 16/243 (6%) Query: 19 KGVQFRNHEIIGDIVPLA------KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVA 70 K + FR+ + + + E G D +G + + + R + Sbjct: 244 KRIVFRDKLYLS-PLTTVGNLPFRRICKEYGVDITCGEMACAIPIINGAIQEWALTKRHS 302 Query: 71 EVIDIPFCVAGG---IKSLEDAAKILSFGADKISINSPALADPTLITRLADRF-GVQCIV 126 + G + + D I +N+ D Q ++ Sbjct: 303 SEDLFGVQLCGHNPKLVTYAAQIIAEKADVDFIDLNTGCPIDLIFNQGGGSALLRRQNVL 362 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + Y + + V + + GA I ++ ++ Sbjct: 363 KVMVQSCSRLLADYGKEFTVKTRIGIYNNKLIAHEMVPKFEDWGASLITIHGRTKEQRYT 422 Query: 187 -GYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGE 243 D E L++ + VP+ +G E + ++ G + + E Sbjct: 423 KRADWEYLQQCATQAQSVPVFGNGDIFGYEDYEHIRTKCPNIAGVMVGRGALIKPWVFQE 482 Query: 244 LKA 246 +K Sbjct: 483 IKE 485 Score = 77.6 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 48/157 (30%), Gaps = 8/157 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA-EVIDI 75 VK + + + ++ + GA + + T + D ++ + A + + Sbjct: 382 VKTRIGIYNNKLI-AHEMVPKFEDWGASLITIHGRTKEQRYTKRADWEYLQQCATQAQSV 440 Query: 76 PFCVAGGIKSLEDAAKILSFGA---DKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 P G I ED + + + AL P + + +R G Sbjct: 441 PVFGNGDIFGYEDYEH-IRTKCPNIAGVMVGRGALIKPWVFQEIKER-KTLDPSSGERFE 498 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 Y + + D T+ L+W + + Sbjct: 499 MLKRYVNYGLEHWGSDTKGVETTRRFLLEWQSFLYRY 535 >UniRef50_Q7X346 Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X346_9BACT Length = 355 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 61/216 (28%), Gaps = 8/216 (3%) Query: 37 KRYAEEGADELVFYDIT---ASSDGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAK 91 + E GA + ++T R + + + R +AG ++ AA Sbjct: 14 RLCVELGAR-ITVSEMTLARRLKQKRNSEFALIRRFPGEPCFGVQLAGNKPDETAWAAAL 72 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + S GAD + IN D L G Q + ++ Sbjct: 73 VESRGADFVDINFGCPIDYFTRKGLGASIGRQPQ-RMRRLVEAIKGSVTNIPVTAKIRLG 131 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGA 210 L Q GA + ++ ++ D + + ++ VP+I +G Sbjct: 132 WNDDDRNYLQQAQAAVDGGAAALFVHGRTRNARYRFAADWDAIARIVAAVPVPVIGNGDL 191 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 A + + A + E Sbjct: 192 LFPHEIAAARERSGCAAVMVARAALIKPWIFREAVD 227 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 43/154 (27%), Gaps = 4/154 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPF 77 K N + + + A+ + GA L + T + D ++R+ + +P Sbjct: 127 KIRLGWNDDD-RNYLQQAQAAVDGGAAALFVHGRTRNARYRFAADWDAIARIVAAVPVPV 185 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + + A G + + AL P + D + + + Sbjct: 186 IGNGDLLFPHEIAAARERSGCAAVMVARAALIKPWIFREAVDGYWDITAEERVGLYRRYV 245 Query: 137 TGKYHVNQYTGDESRTRVTQWET-LDWVQEVQKR 169 T T L++ R Sbjct: 246 TLAREHWGDDEHGLARIRTFLNWHLEFWYRYVPR 279 >UniRef50_C3MBL4 tRNA-dihydrouridine synthase n=1 Tax=Rhizobium sp. NGR234 RepID=C3MBL4_RHISN Length = 342 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 9/158 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW---YDAETGKYHV 142 E A + + GAD + IN A ++ + ++ D +A V Sbjct: 95 AEAAKIVEANGADIVDINMGCPA-----KKVTGGYSGSALMRDPDHALSLIEATVKAVRV 149 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 + ++ G I ++ + NG D + ++ VR+V Sbjct: 150 PVTLKMRLGWDENSINAPLIARRAEEAGVQAITIHGRTRMQFYNGNADWDAIRAVRDVIS 209 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +PLIA+G T+ +E R + D + + Sbjct: 210 IPLIANGDVDTIADAMEILRRSGADAVMLGRSCQGRPW 247 Score = 93.4 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 3/95 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + I + +A+R E G + + T D + V +VI IP Sbjct: 154 KMRLGWDENSINAPL-IARRAEEAGVQAITIHGRTRMQFYNGNADWDAIRAVRDVISIPL 212 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPT 111 G + ++ DA +IL GAD + + P Sbjct: 213 IANGDVDTIADAMEILRRSGADAVMLGRSCQGRPW 247 >UniRef50_Q2RM54 Dihydrouridine synthase TIM-barrel protein nifR3 n=6 Tax=Clostridia RepID=Q2RM54_MOOTA Length = 334 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 36/113 (31%), Gaps = 1/113 (0%) Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 ++ + V GA + ++ + +G D ++V+E Sbjct: 140 PVTVKMRLGWDEDSINVVEAARAVVYAGAAAVAIHGRTRSQFYSGRADWSYFRRVKEAVD 199 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 VP+I +G T + + DG + + ++A L + Sbjct: 200 VPVIGNGDVRTARDAVTMLAETGCDGVMVGRGAVGNPWLLTAIRAVLEGRPEP 252 Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 3/131 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + ++V A+ GA + + T S D S+ RV E +D+P Sbjct: 143 VKMRLGWDE-DSINVVEAARAVVYAGAAAVAIHGRTRSQFYSGRADWSYFRRVKEAVDVP 201 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G +++ DA +L G D + + A+ +P L+T + + +D Sbjct: 202 VIGNGDVRTARDAVTMLAETGCDGVMVGRGAVGNPWLLTAIRAVLEGRPEPPPVDVRTRM 261 Query: 136 ETGKYHVNQYT 146 H+ Sbjct: 262 TMACRHLKLLV 272 >UniRef50_Q54ES7 tRNA-dihydrouridine synthase 4-like protein n=1 Tax=Dictyostelium discoideum RepID=Q54ES7_DICDI Length = 344 Score = 106 bits (266), Expect = 5e-22, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 60/171 (35%), Gaps = 8/171 (4%) Query: 76 PFCVAGGIKSLED---AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 P V G+ + E+ AA+ + I IN + + FG ++ + Sbjct: 111 PLIVQFGVNNAEELVSAAEKVKDYCQGIDINCGCPQRWV----MKEGFGANLLLHPERIY 166 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLE 191 + V + R + +T++ + ++ G I ++ + D + Sbjct: 167 DMVKQINNRVPIPISIKIRVQSDLKDTIELAKRAERIGVSWITVHGRTSAMKSSHPVDYD 226 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +K V++ +P+ A+G T+ E V+G ++A Sbjct: 227 AIKLVKDNVTLPVFANGDVFTLSQSNEIREKTGVNGVMSARGLLTNPALFQ 277 Score = 84.1 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 6/132 (4%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFC 78 ++ R + D + LAKR G + + T A VD + V + + +P Sbjct: 181 SIKIRVQSDLKDTIELAKRAERIGVSWITVHGRTSAMKSSHPVDYDAIKLVKDNVTLPVF 240 Query: 79 VAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAET 137 G + +L + +I G + + L +P L + I D Sbjct: 241 ANGDVFTLSQSNEIREKTGVNGVMSARGLLTNPALF----QGYDKTPIECIKDFINIYSE 296 Query: 138 GKYHVNQYTGDE 149 Sbjct: 297 YGGLHPVIFHRH 308 >UniRef50_P41504 Probable tRNA-dihydrouridine synthase n=93 Tax=Alphaproteobacteria RepID=DUS_RHILP Length = 317 Score = 106 bits (266), Expect = 5e-22, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 9/158 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW---YDAETGKYHV 142 E A GAD I IN A ++ + ++ D +A + Sbjct: 74 AEAAKIAADHGADIIDINMGCPA-----KKVIGGYSGSALMRDPDHALGLIEATVKAVDI 128 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 D + + G + ++ + G D + ++ VREV Sbjct: 129 PVTLKMRLGWDENSINAPDIARRAEASGIQLVTIHGRTRMQFYEGRADWDAIRAVREVIS 188 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 VPLIA+G T E R + D + + Sbjct: 189 VPLIANGDVETAHDAQEILRRSGADAVMIGRGCQGRPW 226 Score = 87.6 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 3/151 (1%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + I +A+R G + + T D + V EVI +P Sbjct: 133 KMRLGWDENSINAP-DIARRAEASGIQLVTIHGRTRMQFYEGRADWDAIRAVREVISVPL 191 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G +++ DA +IL GAD + I P LA + + Sbjct: 192 IANGDVETAHDAQEILRRSGADAVMIGRGCQGRPWHAGVLAGAAEPRREDIADIAVEHYR 251 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + W + + Sbjct: 252 MMLDFYGEAVAIRHARKHLGWYLERFAPALA 282 >UniRef50_A0Z0J5 TRNA-dihydrouridine synthase B n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z0J5_9GAMM Length = 352 Score = 106 bits (266), Expect = 6e-22, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 52/188 (27%), Gaps = 14/188 (7%) Query: 79 VAGGIKSLE-----------DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 GG++S++ A GAD I IN A Sbjct: 76 AKGGLRSVQIVGSEPQQLANAARLNADDGADVIDINMGCPAKKVCKKAAGSALLADE--D 133 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + A V + Q + + + G + ++ + G Sbjct: 134 RVAEILKAVVSAVDVPVTLKIRTGVSPQQRNGVAIAKIAEDAGIQLLTVHGRTRADRFKG 193 Query: 188 -YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + ++++ + +P++A+G T L + G + + G + Sbjct: 194 EAEYHTIERIVDAVSIPVLANGDITTPAQALAVLQKTGAAGIMIGRAALGRPWLPGAIAQ 253 Query: 247 YLATQGVE 254 LA Sbjct: 254 SLAGLRTP 261 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 2/88 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK + G L + T + + + + R+ + + IP G I + A Sbjct: 166 VAIAKIAEDAGIQLLTVHGRTRADRFKGEAEYHTIERIVDAVSIPVLANGDITTPAQALA 225 Query: 92 IL-SFGADKISINSPALADPTLITRLAD 118 +L GA I I AL P L +A Sbjct: 226 VLQKTGAAGIMIGRAALGRPWLPGAIAQ 253 >UniRef50_A3VWV8 TRNA-dihydrouridine synthase, putative n=4 Tax=Rhodobacterales RepID=A3VWV8_9RHOB Length = 339 Score = 106 bits (265), Expect = 8e-22, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 3/167 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID--TWYDAETGKYHVN 143 E A + GA I IN A + A G + +A G V Sbjct: 81 AEAARVVADHGARIIDINMGCPAKKVVSAAGAGASGSALMRDLDHALRLIEAVVGAVDVP 140 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHV 202 + + + G I ++ + G D + + + ++ Sbjct: 141 VTLKTRLGWDEGCSNAAELAKRAEAAGVAMITVHGRTRCQFYRGAADWAMISDIAQAVNI 200 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 P+IA+G + A ++ G + + + E+ A + Sbjct: 201 PVIANGDIVGVASACRAMAQSNAAGVMIGRGARGRPWLLAEVAAAMG 247 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 3/154 (1%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPF 77 K + + LAKR G + + T R D + +S +A+ ++IP Sbjct: 144 KTRLGWDEG-CSNAAELAKRAEAAGVAMITVHGRTRCQFYRGAADWAMISDIAQAVNIPV 202 Query: 78 CVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I + A + A + I A P L+ +A G A+ Sbjct: 203 IANGDIVGVASACRAMAQSNAAGVMIGRGARGRPWLLAEVAAAMGHGTAPEVPRGAVLAD 262 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 H G R + ++ G Sbjct: 263 LVAGHYEAMLGFYGRDLGLRVARKHLGWYMEAAG 296 >UniRef50_C1E909 tRNA-dihydrouridine synthase (Fragment) n=2 Tax=Micromonas RepID=C1E909_9CHLO Length = 353 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 56/159 (35%), Gaps = 7/159 (4%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA I++ D + IN R +G + H++ Sbjct: 106 KAASIVAPHCDGVDINFGCPQRIAKRGR----YGAFLMDDWETVHNLINKLDKHLSVPVT 161 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN---GYDLEQLKKVREVCHVPL 204 + R +L + + V+ GA I ++ ++ R + ++++++ VP+ Sbjct: 162 AKIRVYDDLETSLKYAKMVEAAGAQLIAVHGRTREQKRAADVRANWAFIREIKKQLKVPV 221 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +A+G T+ + DG L+A + + Sbjct: 222 LANGDIRTLAEAEKCLEATGADGVLSAEPLLENPSLFSD 260 Score = 89.1 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 4/96 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 + R ++ + + AK GA + + T + +++ + + + +P Sbjct: 163 KIRVYDDLETSLKYAKMVEAAGAQLIAVHGRTREQKRAADVRANWAFIREIKKQLKVPVL 222 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 G I++L +A K L GAD + P L +P+L Sbjct: 223 ANGDIRTLAEAEKCLEATGADGVLSAEPLLENPSLF 258 >UniRef50_D2RA64 TIM-barrel protein, nifR3 family n=5 Tax=Actinobacteridae RepID=D2RA64_GARVA Length = 384 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 23/226 (10%), Positives = 58/226 (25%), Gaps = 8/226 (3%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPF----CVAGGIKSLEDAAKIL 93 E G D L ++ + + + +E A +I+ Sbjct: 35 ICREFGPDGLYVAEMITARALVARNPKALRLCRFAPSEKVRSLQLYGVNPSIVEQATRIV 94 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQ-CIVVGIDTWYDAETGKYHVNQYTGDES 150 AD + +N + ++ I + + Sbjct: 95 VDENMADHVDLNFGCPVPKVTRRGGGSALPWKTDLLQEILHRVVSVCEPAGIPVTAKFRV 154 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGG 209 + Q+ G + L+ G+ D +++ ++ E +P+ +G Sbjct: 155 GIDENHETFIQAGHIAQEEGCAAVTLHARTTAEYYGGHSDWQRIGELVETLDIPVFGNGD 214 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 E L F++ G + +++ + Sbjct: 215 IWGAEDALAMFKETGCAGVAIGRGCQGRPWLFADIRNACEGSDNRV 260 >UniRef50_Q9XVN8 Protein F36A2.2, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XVN8_CAEEL Length = 527 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 22/195 (11%), Positives = 61/195 (31%), Gaps = 10/195 (5%) Query: 66 VSRVAEVIDIPFCVAGG-IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 ++ V + + + A +++ D + +N R +G Sbjct: 121 LALVKADRPLVVQFCANKVDTFLAACRLVEDVCDGVDLNLGCPQMVAKRGR----YGSWL 176 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + + + R R + +T+++ + + GA + ++ +D Sbjct: 177 QDEVDLICEMVSAVRDYCRLPISCKIRVRDDRQQTVEYAKRLVDAGATMLTVHGRTRDMK 236 Query: 185 RNG---YDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 D +++ V E VP++A+G + ++A + Sbjct: 237 GAETGLADWSRIRDVVEAVGSRVPVMANGNIQFPGDVERCMQATGAVAIMSAEGLLYNPL 296 Query: 240 NIGELKAYLATQGVE 254 + A++ T + Sbjct: 297 IFDDANAHVDTWKIA 311 Score = 79.9 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 37/111 (33%), Gaps = 6/111 (5%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVID--IP 76 + R + V AKR + GA L + T G + D S + V E + +P Sbjct: 201 KIRVRDDRQQTVEYAKRLVDAGATMLTVHGRTRDMKGAETGLADWSRIRDVVEAVGSRVP 260 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIV 126 G I+ D + + GA I L +P + I Sbjct: 261 VMANGNIQFPGDVERCMQATGAVAIMSAEGLLYNPLIFDDANAHVDTWKIA 311 >UniRef50_A9GW95 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GW95_SORC5 Length = 328 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 45/156 (28%), Gaps = 2/156 (1%) Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 G + IN P + R A ++ + + Sbjct: 95 GPAFLDINCGCWV-PKIAGRGAGAGWLRDPEAMVAMARLVTRSVALPVTVKTRIGWGPES 153 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTME 214 +D + ++ G + ++ +G D + REV +P++ +G T + Sbjct: 154 HMPIVDLARRLEDAGVAALTIHCRTAQMGHSGAADWGWAARAREVVSIPVVVNGDIKTAD 213 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 A R+ G + E +A L Sbjct: 214 DAARALRETGCAGVMVGRAAIDHPWIFREARALLDD 249 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 2/101 (1%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK E IV LA+R + G L + TA D W +R EV+ IP Sbjct: 143 VKTRIGWGPESHMPIVDLARRLEDAGVAALTIHCRTAQMGHSGAADWGWAARAREVVSIP 202 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 V G IK+ +DAA+ L G + + A+ P + Sbjct: 203 VVVNGDIKTADDAARALRETGCAGVMVGRAAIDHPWIFREA 243 >UniRef50_C6PST5 Dihydrouridine synthase DuS n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PST5_9CLOT Length = 236 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 42/104 (40%), Gaps = 1/104 (0%) Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 + + ++ + + GA I ++ ++ + +G +Q+++ + V + Sbjct: 57 ITVKFRVGIKEDEMIAAEFAKMCEASGADMITIHGRTRNMMYHGTPYFDQIEQAKSVVRI 116 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 P+IA+GG + E + + DG + A + EL Sbjct: 117 PVIANGGIFSKEDADKMMKLTGADGVMIARYAIENPFIFSELTH 160 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 5/111 (4%) Query: 13 RDGQV--VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK-SWVSRV 69 + G+V VK + + AK GAD + + T + + + Sbjct: 52 KSGKVITVKFRVGIKEDEMI-AAEFAKMCEASGADMITIHGRTRNMMYHGTPYFDQIEQA 110 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADR 119 V+ IP GGI S EDA K++ GAD + I A+ +P + + L + Sbjct: 111 KSVVRIPVIANGGIFSKEDADKMMKLTGADGVMIARYAIENPFIFSELTHK 161 >UniRef50_Q5KC68 tRNA-dihydrouridine synthase 3 n=2 Tax=Filobasidiella neoformans RepID=DUS3_CRYNE Length = 725 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 65/232 (28%), Gaps = 24/232 (10%) Query: 37 KRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAK 91 + + GA + ++ + G + + V R VAGG + + A Sbjct: 375 RLCVDYGAT-ITVSEMALAQPLVYGAKEEWALVRRHESEKMFGVQVAGGFPNRMVPAAEV 433 Query: 92 ILSF-----GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 I + G D + +N D + Sbjct: 434 IANTIGKGGGVDFVDVNMGCPIDLVFNQGAGSALMDSPG-RLGKLLVGMNRALGDIPLTV 492 Query: 147 GDESRTRVTQWETLDWVQEVQ-KRGAGEIVLNMMNQDGVRNGY-DLEQLKKV-------- 196 + + + + GAG + ++ ++ + D E +K Sbjct: 493 KFRTGVAHGKPNAHKLIPRFVTEWGAGALTIHGRSRQQRYSKPADWEYIKTCVTALRESV 552 Query: 197 --REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + VP+ +G + + E + VDG + A + E+K Sbjct: 553 ADANLPPVPIFGNGDCFSAASYYEEMDRSGVDGVMVARGALIKPWIFTEIKE 604 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 44/139 (31%), Gaps = 13/139 (9%) Query: 37 KRYAEEGADELVFYDITASS-DGRVVDKSWVS----RVAEVI------DIPFCVAGGIKS 85 + E GA L + + + D ++ + E + +P G S Sbjct: 511 RFVTEWGAGALTIHGRSRQQRYSKPADWEYIKTCVTALRESVADANLPPVPIFGNGDCFS 570 Query: 86 LEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 ++ G D + + AL P + T + +R I + ++ ++ Sbjct: 571 AASYYEEMDRSGVDGVMVARGALIKPWIFTEIKER-REWDISAVERLEGIKKFAEFGLSH 629 Query: 145 YTGDESRTRVTQWETLDWV 163 + D T+ + + Sbjct: 630 WGSDTQGVNTTRRFLCEAL 648 >UniRef50_Q4DCG2 Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi RepID=Q4DCG2_TRYCR Length = 529 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 23/224 (10%), Positives = 55/224 (24%), Gaps = 20/224 (8%) Query: 37 KRYAEEGADELVF------YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + GAD + +++ G S + R +A + + A Sbjct: 187 RVCKSYGAD-ITVSSMSLVHNLNRLQKGE---WSLLRRHESEDVFGLQIA--VSQPQSAQ 240 Query: 91 KILSFG------ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 D I IN + + D + Sbjct: 241 TWAKAIEASGYSYDFIDINCGCPVQMIMSAGCGCGLWERRDNRLRDIVSSLVQHQSKPVS 300 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVP 203 + + + + + GA + ++ + + E + +P Sbjct: 301 IKCRIGAGANSSASLHEKIGDYEGWGADAVTIHGRFRAQRYTKLANWEYIDSCAARTSLP 360 Query: 204 LIASGGAGTMEHFLEAFR-DADVDGALAASVFHKQIINIGELKA 246 +I +G + E ++ V + + E+K Sbjct: 361 VIGNGDIFSYEDIIDHRERYPHVSSYMIGRGALIKPWIFEEIKQ 404 Score = 86.4 bits (213), Expect = 8e-16, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 4/134 (2%) Query: 39 YAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-- 95 Y GAD + + + ++ + ++ A +P G I S ED Sbjct: 322 YEGWGADAVTIHGRFRAQRYTKLANWEYIDSCAARTSLPVIGNGDIFSYEDIIDHRERYP 381 Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 I AL P + + + I Y ++ + DE T Sbjct: 382 HVSSYMIGRGALIKPWIFEEIKQE-QPRDISSQERFEMLRSFCNYGLSHWGSDERGVLTT 440 Query: 156 QWETLDWVQEVQKR 169 + +W+ + + Sbjct: 441 RRFLCEWLSFLCRY 454 >UniRef50_Q6M9N8 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6M9N8_PARUW Length = 297 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 65/203 (32%), Gaps = 6/203 (2%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADP 110 A + A + I + G S+ + A I G D + +N D Sbjct: 5 DALIRHDPHTYHILDYAANMHPIGGQLCGSKPSIAGQAAKIIEELGFDIVDLNCGCPVDK 64 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 IT+ G+ I + + Q + + VQ V++ G Sbjct: 65 --ITKDGSGSGLLKTPELIGEIVCNMVSAVKIPVTVKIRAGWDEQQIQVENIVQIVEQAG 122 Query: 171 AGEIVLNMMNQDGVRNGY-DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 A I ++ + G + E +K+ + + +I +G + F + D Sbjct: 123 AQAICIHGRTRQQGYRGPANWEYIKRGKLAAKSIKIIGNGDVLDGPSAAKMFCETGCDAV 182 Query: 229 LAASVFHKQIINIGELKAYLATQ 251 L A Q + ++ YL + Sbjct: 183 LVARGTLGQPWIVQDILRYLEGK 205 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 25/210 (11%), Positives = 62/210 (29%), Gaps = 21/210 (10%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA-EVIDI 75 VK + + I + + + + GA + + T + ++ R I Sbjct: 98 VKIRAGWDEQQIQ-VENIVQIVEQAGAQAICIHGRTRQQGYRGPANWEYIKRGKLAAKSI 156 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 G + AAK+ G D + + L P ++ + + + Sbjct: 157 KIIGNGDVLDGPSAAKMFCETGCDAVLVARGTLGQPWIVQDILRYLEGKTAI-------- 208 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI---VLNMMNQDGVRNGYDLE 191 Q + ++++ G + + ++ + D+E Sbjct: 209 -CHSLEDCRQALYQHFLETLHYHPDQRVCIDMRRVGCWYLKKSSGTRLFRELISKASDVE 267 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 +K + + PL G + E + + Sbjct: 268 VIKNL--ILDFPL---GDSTESEDIAQTQK 292 >UniRef50_A4RQU5 Predicted protein n=2 Tax=Ostreococcus RepID=A4RQU5_OSTLU Length = 608 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 64/216 (29%), Gaps = 7/216 (3%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKIL 93 + GAD T+ G + + + R + GG S+ ++L Sbjct: 264 RVCKTLGADITCGEMALCTSLLQGLPSEWALLRRHKSEDIFGVQICGGYPDSVTRCCQLL 323 Query: 94 SF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 D I IN D + + + + + Sbjct: 324 EDTIDVDFIDINMGCPIDSVCQKGYGSMMLEKPKKMETVIRAASAALGKCSLTFKTRMAY 383 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 T ++ + +V + GA + L+ + D E K +E VPLI +G Sbjct: 384 TDKSRV-AHTFAPKVAEWGAAAMTLHGRTRAQRYRSVADWEYTKLTKESSSVPLIGNGDV 442 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + + VD + A + E+K Sbjct: 443 YMQKDYYTHLEEHSVDTCMLARGALIKPWLFTEIKE 478 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 47/156 (30%), Gaps = 3/156 (1%) Query: 35 LAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 A + AE GA + + T + R D + E +P G + +D L Sbjct: 393 FAPKVAEWGAAAMTLHGRTRAQRYRSVADWEYTKLTKESSSVPLIGNGDVYMQKDYYTHL 452 Query: 94 SFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 D + AL P L T + +R I + + + D Sbjct: 453 EEHSVDTCMLARGALIKPWLFTEIKER-RDWDISSRERFDILKSFASFGLEHWGSDTRGV 511 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 T+ L+W+ + ++ + + Sbjct: 512 ESTRKYLLEWMSFTYRYTPIGLLDHSYGAAAMTQRP 547 >UniRef50_UPI000180C543 PREDICTED: similar to dihydrouridine synthase 1-like n=2 Tax=Eumetazoa RepID=UPI000180C543 Length = 626 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 60/187 (32%), Gaps = 10/187 (5%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLE---DAAKILSFGADKISINSPALADPTLITRLADRF 120 V ++ D P V S E +A+K++ + + +N F Sbjct: 61 KVVQDLSSTEDHPLIVQFCSNSAENFLEASKLVEGLCEGVDLNLGCPQHIAKRGH----F 116 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G T K H+ + R +T+ + Q ++ G I ++ Sbjct: 117 GAYLQEDWDLIIEIISTTKQHIGIGVTAKIRVFNEIDKTVKYAQMLETAGCDIITVHGRT 176 Query: 181 QDGVR---NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 ++ + +K V++ +P+ A+G + VDG + A Sbjct: 177 REQKGPNTGLASWDHIKAVKDNVDIPVFANGNIQYYCDIMRCMETTGVDGVMVAEGNLTN 236 Query: 238 IINIGEL 244 + +L Sbjct: 237 PMIFQDL 243 Score = 93.4 bits (231), Expect = 6e-18, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 58/191 (30%), Gaps = 26/191 (13%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAE 71 G K F I V A+ G D + + T G + + V + Sbjct: 141 GVTAKIRVFNE---IDKTVKYAQMLETAGCDIITVHGRTREQKGPNTGLASWDHIKAVKD 197 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 +DIP G I+ D + + G D + + L +P + L+ V +V Sbjct: 198 NVDIPVFANGNIQYYCDIMRCMETTGVDGVMVAEGNLTNPMIFQDLSTPCNVYDVVEEYF 257 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 + A ++++ ++ + + ++ Sbjct: 258 ALVAQYPCPLSSARSHMFRIW-------------------ARTLLIHKDMRERIGSANNI 298 Query: 191 EQLKKVREVCH 201 + LK+ EV Sbjct: 299 DMLKECNEVLK 309 >UniRef50_C4VA23 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4VA23_NOSCE Length = 327 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 71/221 (32%), Gaps = 17/221 (7%) Query: 35 LAKRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCV---AGGIKSLEDA 89 LA+RY GAD + ++ S ID P + + + Sbjct: 28 LARRY---GADICYTEMVNCDTFIRSKINPLSNRWYTTNKIDRPLIIQICGNDVNKMLKV 84 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + IL D I IN + +G + + ++ + Sbjct: 85 SLILQEYCDAIDINLGCPQEIAR----KGNYGSFLMDDLLKVKEIVTVLSNNLKVPVTCK 140 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLIA 206 R + +++++ + +++ G + ++ +D + ++ ++ ++P+I+ Sbjct: 141 IRIFESIEKSVEYAKMIEQAGCKMLTVHGRTRDQRGLNTGLASWDHIRAIKASLNIPVIS 200 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +G DG + A + +K + Sbjct: 201 NGNIINNSDIDNCVEYTKCDGVMVAETHLYNPLIF--IKRH 239 Score = 80.7 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 37/113 (32%), Gaps = 9/113 (7%) Query: 4 KRIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG--- 58 K I+ L +++ K F I V AK + G L + T G Sbjct: 123 KEIVTVLSNNLKVPVTCKIRIFE---SIEKSVEYAKMIEQAGCKMLTVHGRTRDQRGLNT 179 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADP 110 + + + ++IP G I + D + D + + L +P Sbjct: 180 GLASWDHIRAIKASLNIPVISNGNIINNSDIDNCVEYTKCDGVMVAETHLYNP 232 >UniRef50_D0WEP2 tRNA-dihydrouridine synthase B n=2 Tax=Slackia RepID=D0WEP2_9ACTN Length = 318 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 15/113 (13%), Positives = 35/113 (30%), Gaps = 1/113 (0%) Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREV 199 + +D+ ++ GA + ++ + G E + +V+ Sbjct: 120 SCPVTVKFRRGFGAEEETAVDFGLRMEDAGAAAVTVHGRTAAQMYRGPSEWECVARVKAA 179 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 VP+I +G + + R DG + A +++ L Sbjct: 180 LSVPVIGNGDIVSGASAADMVRATGCDGVMIARGAQGNPWIFADVRRVLDGMP 232 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 3/128 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIP 76 VK + E V R + GA + + TA+ R + V+RV + +P Sbjct: 125 VKFRRGFGAEEET-AVDFGLRMEDAGAAAVTVHGRTAAQMYRGPSEWECVARVKAALSVP 183 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I S AA ++ G D + I A +P + + Sbjct: 184 VIGNGDIVSGASAADMVRATGCDGVMIARGAQGNPWIFADVRRVLDGMPPAPDPTRQDRV 243 Query: 136 ETGKYHVN 143 E + H++ Sbjct: 244 EMARRHIH 251 >UniRef50_A7BE39 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BE39_9ACTO Length = 411 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 37/136 (27%), Gaps = 1/136 (0%) Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 F V E + D QK GA + L+ Sbjct: 156 FSDLVGAVVRACDEAGERAGREIPVTVKIRIGIDSEHETATDAALNAQKLGAAALTLHAR 215 Query: 180 NQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 Q+ G+ +++ +++++ +P+ +G L DG + Sbjct: 216 TQNQHYAGHAHWDEIARLKDLLDIPVFGNGDVFEAADALAMLEQTGCDGISVGRGAQGRP 275 Query: 239 INIGELKAYLATQGVE 254 ++ A + Sbjct: 276 WIFRDIVAAYHGGSIP 291 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 3/110 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + E A + GA L + T + ++R+ +++DIP Sbjct: 182 VKIRIGIDSEHETAT-DAALNAQKLGAAALTLHARTQNQHYAGHAHWDEIARLKDLLDIP 240 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 G + DA +L G D IS+ A P + + + I Sbjct: 241 VFGNGDVFEAADALAMLEQTGCDGISVGRGAQGRPWIFRDIVAAYHGGSI 290 >UniRef50_C2KNM7 Possible tRNA-dihydrouridine synthase n=4 Tax=Mobiluncus RepID=C2KNM7_9ACTO Length = 471 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 56/215 (26%), Gaps = 13/215 (6%) Query: 54 ASSDGRVVDKSWVSR--VAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADP 110 A G V + V I G A +++ G AD I +N Sbjct: 129 ALRMGSERSWVMVKSGPLQAVKSIQLYGVVGEDLAWAAGELVRRGLADHIDLNFGCPVPK 188 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAE---------TGKYHVNQYTGDESRTRVTQWETLD 161 + G + V S LD Sbjct: 189 VTRKGGGSALPWKTAYFGEVVAAVVAATRVASEDSGRSFPVPVTVKIRSGIDAEHRIFLD 248 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + + G + L+ G+ E + + EV +P++ +G LE F Sbjct: 249 VARVAEDNGVAAVTLHARTTSEYYGGHSHWEDIAALVEVLDIPVLGNGDVFCAADALEMF 308 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 R+ G + E+ A L V + Sbjct: 309 RETGCAGVEIGRAVQGRPWIFREITAALWGLPVPV 343 Score = 85.7 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 54/186 (29%), Gaps = 10/186 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + E + +A+ + G + + T S ++ + EV+DIP Sbjct: 233 VKIRSGIDAEHRI-FLDVARVAEDNGVAAVTLHARTTSEYYGGHSHWEDIAALVEVLDIP 291 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + DA ++ G + I P + + + VG A Sbjct: 292 VLGNGDVFCAADALEMFRETGCAGVEIGRAVQGRPWIFREITAALWGLPVPVGPSLGEVA 351 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 + H V + + + + + +E L + Sbjct: 352 NVARRHAEGLVAHYGNELVALRDMRKHLGWYFRGF-------GLGGEMRGRLARVESLAE 404 Query: 196 VREVCH 201 + + H Sbjct: 405 LEQATH 410 >UniRef50_D1NSS9 Putative tRNA-dihydrouridine synthase n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSS9_9BIFI Length = 422 Score = 104 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 27/222 (12%), Positives = 53/222 (23%), Gaps = 10/222 (4%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPF----CVAGGIKSLEDAAKIL 93 + G D L ++ + + + +E AAKI+ Sbjct: 73 LCEQYGPDGLYVAEMITARALVARNPKALRLCRFAPSERIRSLQLYGVNPSIMEQAAKIV 132 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT--GDE 149 AD + +N P + R + D Sbjct: 133 VDEQMADHVDLNFGCPV-PKVTRRGGGSALPWKTDLFTDVVSRVVRVCDAAGIPVTAKIR 191 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASG 208 + Q+ G + L+ G+ D ++ ++ E VP+ +G Sbjct: 192 VGIDHEHETFHEAGHIAQEEGCKAVTLHARTTAEYYGGHSDWSRIGELVEQLDVPVFGNG 251 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 L G + ++K A Sbjct: 252 DIWGAADALAMVEQTGCAGVAIGRGCQGRPWLFADIKHAFAG 293 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 2/89 (2%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 EEG + + T + D S + + E +D+P G I DA + Sbjct: 203 EAGHIAQEEGCKAVTLHARTTAEYYGGHSDWSRIGELVEQLDVPVFGNGDIWGAADALAM 262 Query: 93 LS-FGADKISINSPALADPTLITRLADRF 120 + G ++I P L + F Sbjct: 263 VEQTGCAGVAIGRGCQGRPWLFADIKHAF 291 >UniRef50_Q4PG83 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4PG83_USTMA Length = 527 Score = 104 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 60/157 (38%), Gaps = 7/157 (4%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 +L AAK++ D + +N +G + + ++ Sbjct: 146 TLLKAAKVVEDRCDAVDLNLGCPQHIARRGH----YGSYLMEDWSLIFSLINILHVNLKV 201 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--GVRNG-YDLEQLKKVREVCH 201 + R + +T+ + + +++ GA I ++ ++ G G D +++ V+E + Sbjct: 202 PVTAKMRVYESVEKTITYARLLERAGAQIITVHGRTRNMKGHLTGLADWAKIRAVKEAVN 261 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 VP+ A+G + F +A DG ++A Sbjct: 262 VPVFANGNVLYPQDFYDALAATGADGVMSAEGNLYNP 298 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 4/96 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFC 78 + R +E + + A+ GA + + T + G + D + + V E +++P Sbjct: 206 KMRVYESVEKTITYARLLERAGAQIITVHGRTRNMKGHLTGLADWAKIRAVKEAVNVPVF 265 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 G + +D L+ GAD + L +P ++ Sbjct: 266 ANGNVLYPQDFYDALAATGADGVMSAEGNLYNPAIM 301 >UniRef50_Q8SUV4 Putative uncharacterized protein ECU07_1610 n=1 Tax=Encephalitozoon cuniculi RepID=Q8SUV4_ENCCU Length = 341 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 55/171 (32%), Gaps = 12/171 (7%) Query: 77 FCVAGGIKSLE---DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 + G S E +AA I+ D I +N +G T Sbjct: 72 VQICG--NSPEVMLEAALIIQDHCDAIDVNFGCPQKVAR----KGGYGAYLQENWKLTGE 125 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDL 190 + +N + R + +T+++ + +++ G + ++ +D Sbjct: 126 IVKVLSSGLNVPVFCKIRVFGSIEKTVEYAKMIEEAGCSLLAVHGRTRDQRGAAMGFASW 185 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 + ++ ++E +P++++G T DG + + Sbjct: 186 KHIRAIKENLRIPVLSNGNIMTHHDVWRCLEYTGCDGVMVGEAHLHNPLIF 236 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 29/86 (33%), Gaps = 4/86 (4%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKS 85 I V AK E G L + T G + + E + IP G I + Sbjct: 148 IEKTVEYAKMIEEAGCSLLAVHGRTRDQRGAAMGFASWKHIRAIKENLRIPVLSNGNIMT 207 Query: 86 LEDAAKILS-FGADKISINSPALADP 110 D + L G D + + L +P Sbjct: 208 HHDVWRCLEYTGCDGVMVGEAHLHNP 233 >UniRef50_D1AWB1 Dihydrouridine synthase DuS n=12 Tax=Fusobacteriaceae RepID=D1AWB1_STRM9 Length = 305 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 67/190 (35%), Gaps = 4/190 (2%) Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 + ++ E +I I ++ AAK + G +I++N + + Sbjct: 48 ILKLREN-NIVQIFGKDIYLMQKAAKYIESMGVKEINLNCGCPMKKIVNSGHGSALIKDP 106 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + E L+ + +K I+++ ++ Sbjct: 107 RKIEEILTALREVLDPKTALSLKIRVGYDK-PENYLEIAKIAEKLKCSNIIIHGRTREQK 165 Query: 185 RNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +G D + +K+V++ ++ +I +G ++ +E R+ +VDG + A I + Sbjct: 166 YSGEADWKYIKEVKDNVNIKVIGNGDIFDAKNAIEKIRETNVDGIMLARGILGNPWLISQ 225 Query: 244 LKAYLATQGV 253 +K + Sbjct: 226 IKELFEFGEI 235 Score = 83.4 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 4/119 (3%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVS 67 LD + +K + + + +AK + ++ + T D ++ Sbjct: 119 VLDPKTALSLKIRVGYDK--PENYLEIAKIAEKLKCSNIIIHGRTREQKYSGEADWKYIK 176 Query: 68 RVAEVIDIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 V + ++I G I ++A KI D I + L +P LI+++ + F I Sbjct: 177 EVKDNVNIKVIGNGDIFDAKNAIEKIRETNVDGIMLARGILGNPWLISQIKELFEFGEI 235 >UniRef50_A9UTQ9 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UTQ9_MONBE Length = 328 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 12/192 (6%) Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 A D+ V++ A + P A ++++ AD +N Sbjct: 66 AREADFHTAEDDRPLVAQFAAN-NGPVLA--------HAVELMAPYADAFCLNCGCPQRW 116 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + L + + +D A H R T ET++ V+ + G Sbjct: 117 AIQDGLGCALTLNPDAM-VDLVRHARAAVPHHPVSVKVRIR--DTAAETVELVRRAEAMG 173 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 A I ++ + LK V++ VP++A+G T++ + + DG +A Sbjct: 174 AAWISVHGRTPAERHQPVHYDMLKLVKDSVSVPVVANGDIFTLKDADRVWNETGCDGIMA 233 Query: 231 ASVFHKQIINIG 242 A Sbjct: 234 ARGLLANPGLFE 245 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 1/96 (1%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 V+ R + + V L +R GA + + T + + V + V + + +P Sbjct: 150 SVKVRIRDTAAETVELVRRAEAMGAAWISVHGRTPAERHQPVHYDMLKLVKDSVSVPVVA 209 Query: 80 AGGIKSLEDAAKIL-SFGADKISINSPALADPTLIT 114 G I +L+DA ++ G D I LA+P L Sbjct: 210 NGDIFTLKDADRVWNETGCDGIMAARGLLANPGLFE 245 >UniRef50_D1JF95 Putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=uncultured archaeon RepID=D1JF95_9ARCH Length = 238 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 87/252 (34%), Gaps = 31/252 (12%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEII-----------GDIVPLAKRYAEEGADELVFY 50 + R+I +D+ DG VV + + + D A+ E+ Sbjct: 1 MDFRLIFVMDLLDGVVVHAKRGEREKYVPIHRFSSIVTSSDP---ARVIETIKPKEVYIA 57 Query: 51 DITASSDGRVVDKSWVSRVA-EVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALA 108 D+ ++ + + D+ + G+K +ED + + ADK + + ++ Sbjct: 58 DLNRLLS-TGNNRPILKDLRTRNRDLRIMLDYGVKGMEDLKEAVDAEMADKFVLGTETIS 116 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 L + + T + + L ++E+ K Sbjct: 117 IELLEEASKSDIITDISISIDLFNNEVLTSDTRMK-------------IDPLRLIKELNK 163 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 ++++ +N+ G ++G D E L + E+ ++ GG E + + V GA Sbjct: 164 FPVRDVIVLELNRVGTKSGIDFEFLARAVELSEHDILCGGGVRNCEDVHKM-AEIGVKGA 222 Query: 229 LAASVFHKQIIN 240 L A+ H I Sbjct: 223 LVATAIHDGGIP 234 >UniRef50_Q9FH91 Gb|AAF51525.1 n=7 Tax=Viridiplantae RepID=Q9FH91_ARATH Length = 423 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 72/226 (31%), Gaps = 14/226 (6%) Query: 38 RYAEEGADELV---FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKIL 93 + GA + + + ++ + + E + +L +AAK + Sbjct: 106 LCQKYGAQAAYTPMLHSRIFTETEKYRNQEF-TTCKEDRPLFVQFCANDPDTLLEAAKRV 164 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 D + IN +V A+ N + R Sbjct: 165 EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAQNL----NVPVSCKIRIF 220 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQD---GVRNGYDLEQLKKVREVCHVPLIASGGA 210 +TL + + ++ G + ++ +D G + D +K+V+ +P++A+G Sbjct: 221 PNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWSAIKEVKNAMRIPVLANGNV 280 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELK--AYLATQGVE 254 +E ++ V+G L+A + + + E Sbjct: 281 RCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFRTAEWAKDNEEE 326 Score = 83.4 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 4/90 (4%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITA-SSDGRV--VDKSWVSRVAEVIDIPFCVAGGIKS 85 + D + AK + G L + T DG+ D S + V + IP G ++ Sbjct: 223 LEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWSAIKEVKNAMRIPVLANGNVRC 282 Query: 86 LEDAAKIL-SFGADKISINSPALADPTLIT 114 +ED + G + + L +P Sbjct: 283 IEDVDNCIKETGVEGVLSAETLLENPAAFA 312 >UniRef50_B3PD21 Dihydrouridine synthase family protein n=4 Tax=Proteobacteria RepID=B3PD21_CELJU Length = 321 Score = 103 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 53/167 (31%), Gaps = 2/167 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A +++ +GA I +N A V + + Sbjct: 81 AQELVRYGAKAIDLNFGCPAKTVNSHEGGACLLRTPDRVYSIIKAVRDAVPRAIPVSAKI 140 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIAS 207 + ++ Q V+ GA E+ ++ ++ + ++ +P+IA+ Sbjct: 141 RLGFED-RTSYMENAQAVEAAGADELTVHARSKADGYKPPAYWHYIADIKAALKIPVIAN 199 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 G ++E +L + + ++KAYLA + Sbjct: 200 GEIWSVEDYLRCREQSQCADVMLGRGLLSCPDLARQIKAYLAGEEYR 246 Score = 84.9 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 4/104 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + A+ GADEL + + + +++ + + IP Sbjct: 139 KIRLGFEDRTSY--MENAQAVEAAGADELTVHARSKADGYKPPAYWHYIADIKAALKIPV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRF 120 G I S+ED + + + L+ P L ++ Sbjct: 197 IANGEIWSVEDYLRCREQSQCADVMLGRGLLSCPDLARQIKAYL 240 >UniRef50_A5EVV4 Dihydrouridine synthase n=2 Tax=Cardiobacteriaceae RepID=A5EVV4_DICNV Length = 318 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 48/176 (27%), Gaps = 5/176 (2%) Query: 77 FCVAGG--IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + GG E A + + G D I IN A ++ Sbjct: 72 VQLVGGDPYLMAETAQVMQALGCDVIDINMGCPAKKVGKQNAGSALLSDL--PQVEKILA 129 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 T + + + G + ++ + NG +++ Sbjct: 130 QVTRVVSIPVTLKTRLGFNEQTMTIETVAKIAENTGVAALTVHGRTRAQRFNGTAHYDEI 189 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +V+ +P+I +G T + + DG + + ++ L Sbjct: 190 GRVKAQTSLPIIVNGDITTTAQAQDLIQQFGFDGVMIGRAACGNPWLLAHMRCALD 245 Score = 90.7 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 3/106 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K N + + I +AK G L + T + + RV +P Sbjct: 142 KTRLGFNEQTMT-IETVAKIAENTGVAALTVHGRTRAQRFNGTAHYDEIGRVKAQTSLPI 200 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGV 122 V G I + A ++ G D + I A +P L+ + Sbjct: 201 IVNGDITTTAQAQDLIQQFGFDGVMIGRAACGNPWLLAHMRCALDC 246 >UniRef50_C7GZ00 tRNA-dihydrouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ00_9FIRM Length = 336 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 41/155 (26%), Gaps = 3/155 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 I + G + IN I + + I Sbjct: 88 IQCIENKGNAIVDINMGCPMQK--IVKSGSGAALMKRPDIIYDMVKDAVKITQKPVTAKI 145 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 +D + ++ GA + ++ G + + + V++ +P+I + Sbjct: 146 RIGWDNNNINAVDCAKAIESAGASAVAVHGRTAKQKYEGSVNRDVIASVKQSVSIPVIGN 205 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G + + LE + D + + Sbjct: 206 GDIKSAKEALEFMDETGCDMVMIGRGAIGKPWIFK 240 Score = 94.2 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 3/98 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K ++ I + V AK GA + + TA V++ ++ V + + IP Sbjct: 144 KIRIGWDNNNI-NAVDCAKAIESAGASAVAVHGRTAKQKYEGSVNRDVIASVKQSVSIPV 202 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLIT 114 G IKS ++A + + G D + I A+ P + Sbjct: 203 IGNGDIKSAKEALEFMDETGCDMVMIGRGAIGKPWIFK 240 >UniRef50_UPI0001BCCF0E nifR3 family TIM-barrel protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCCF0E Length = 429 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 44/166 (26%), Gaps = 2/166 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQ-CIVVGIDTWYDAETGKYHVNQYTG 147 A G D + +N + ++ I T A + V Sbjct: 141 AILCGDHGVDHVDLNFGCPVPKVTRKGGGAALPWKATLLGRILTEAVAAAAPFGVPVTMK 200 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 LD + G I L+ +G D + ++ +P++ Sbjct: 201 TRKGIDDDHLTYLDAGHIAEDSGCAAIALHGRTAVQHYSGEADWAAIAALKAAVSIPVLG 260 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +G L R+ DG + + +L A + Sbjct: 261 NGDVWEAADALRMVRETGCDGVVVGRGCLGRPWLFRDLAAAFTGEE 306 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 50/151 (33%), Gaps = 6/151 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + + + + + G + + TA D + ++ + + IP Sbjct: 200 KTRKGIDDDHLT-YLDAGHIAEDSGCAAIALHGRTAVQHYSGEADWAAIAALKAAVSIPV 258 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + DA +++ G D + + L P L LA F + V + T + Sbjct: 259 LGNGDVWEAADALRMVRETGCDGVVVGRGCLGRPWLFRDLAAAFTGEETVPALPTLGEVM 318 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + G + +++ + V Sbjct: 319 AIMRRHAELLG---GWLGEERGCVEFRKHVA 346 >UniRef50_B8HVG9 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamideisomerase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HVG9_CYAP4 Length = 226 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 92/217 (42%), Gaps = 17/217 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 IIP L + +G Q + D V +A+++A +GA L D + G +++ Sbjct: 1 MEIIPALKIMEGFCCHHRQ--PYRFNCDPVAMAEQWANQGATRLHLIDCNGVTTGAMLNL 58 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 ++ + + + +P V G I S + + G D++ ++ ++ L+ L + F + Sbjct: 59 PTIAAIVQQVKVPVQVEGTIYSRAQIETLFAIGVDRVVVD-GSIGWSELVADLCEHFSGK 117 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 +V +A G+ + +T + + GA I+ + + G Sbjct: 118 IMVNL-----EAYDGRVACSG--------ELTGLLATTLAERAEAVGAAGIIYTDIARQG 164 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 +L+ LK + + ++P+IA GGA ++ L F Sbjct: 165 SGI-INLKALKHLADRVNLPIIAGGGASSIAELLRLF 200 Score = 41.4 bits (96), Expect = 0.028, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 LA+R GA +++ DI +++ + +A+ +++P GG S+ + ++ + Sbjct: 143 LAERAEAVGAAGIIYTDIAR-QGSGIINLKALKHLADRVNLPIIAGGGASSIAELLRLFN 201 >UniRef50_A7AQM0 Dihydrouridine synthase, putative n=1 Tax=Babesia bovis RepID=A7AQM0_BABBO Length = 355 Score = 103 bits (257), Expect = 7e-21, Method: Composition-based stats. Identities = 17/175 (9%), Positives = 50/175 (28%), Gaps = 8/175 (4%) Query: 76 PFCV---AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 P ++ AA++L + +N + +V Sbjct: 68 PLIAQVCGDDAGTITQAARLLKGHVSAVDLNLGCPQAIAKDGHYGSFLLDEPDLVTGIVS 127 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN---GYD 189 + + TL+ +++ G + ++ ++ D Sbjct: 128 RVTREVGIA--VTCKIRKVDKDSLQSTLNLCYSLEQSGCKALTVHGRHRSEKGTNVGAAD 185 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + ++ ++ +P+IA+GG T D +++ ++ + Sbjct: 186 WDAIRIIKSRLRIPVIANGGIETFADVERCLSYTGADAVMSSESLLERPYLFSGI 240 Score = 83.8 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 44/161 (27%), Gaps = 9/161 (5%) Query: 15 GQVV--KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRV 69 G V K + + + L + G L + S G D + + Sbjct: 134 GIAVTCKIRKVDKDS-LQSTLNLCYSLEQSGCKALTVHGRHRSEKGTNVGAADWDAIRII 192 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVG 128 + IP GGI++ D + LS GAD + + L P L + + + I+ Sbjct: 193 KSRLRIPVIANGGIETFADVERCLSYTGADAVMSSESLLERPYLFSGI--TYDHLDIMDE 250 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + + Sbjct: 251 YLGIVRRYPDQSPCCIRGHAFKILFQHCQRHPEIRNRLTDA 291 >UniRef50_Q06063 tRNA-dihydrouridine synthase 4 n=23 Tax=Saccharomycetales RepID=DUS4_YEAST Length = 367 Score = 103 bits (256), Expect = 7e-21, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 68/237 (28%), Gaps = 21/237 (8%) Query: 25 NHEIIGDIVPLA------------KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEV 72 + G V +A + E D + I A R Sbjct: 32 RQKTHGRPVTIAGPMVRYSKLPFRQLCREYNVDIVYSPMILAREYVRNEHARISDLSTNN 91 Query: 73 IDIPFCVAGGIKSLEDAAKILSF---GADKISINSPALADPTLITRLADRFGVQCIVVGI 129 D P V G+ ++ D K + D I IN + + ++ Sbjct: 92 EDTPLIVQVGVNNVADLLKFVEMVAPYCDGIGINCGCPIKEQIREGIGCALIYNSDLLCS 151 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY- 188 A KY + R ET++ +++ G I ++ + + Sbjct: 152 --MVHAVKDKYGDKLRIETKIRIHEALDETVELCRKLCDAGVDWITIHGRTRRTRSSQPA 209 Query: 189 DLEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +L+ +K + E +VP+IA+G + + G +A Sbjct: 210 NLDAIKYIIENISDKNVPVIANGDCFKLSDLERITKYTGAHGVMAVRGLLSNPALFA 266 Score = 74.1 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 15/130 (11%) Query: 16 QVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSW 65 VK I + + V L ++ + G D + + T + + + Sbjct: 154 HAVKDKYGDKLRIETKIRIHEALDETVELCRKLCDAGVDWITIHGRTRRTRSSQPANLDA 213 Query: 66 VSRVAEVID---IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFG 121 + + E I +P G L D +I GA + L++P L Sbjct: 214 IKYIIENISDKNVPVIANGDCFKLSDLERITKYTGAHGVMAVRGLLSNPALFAGY-TTCP 272 Query: 122 VQCIVVGIDT 131 CI Sbjct: 273 WGCIEKFCYW 282 >UniRef50_Q256J2 Dehydrogenases n=13 Tax=Chlamydiaceae RepID=Q256J2_CHLFF Length = 339 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 5/165 (3%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 E A + G D I +N D IT+ G+ I + G + Sbjct: 86 EAAKVLEGLGFDLIDLNCGCPTDR--ITKDGSGSGLLKTPELIGKVLEKIIGSVSIPVTV 143 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVC--HVP 203 S + V+ +++ GA + ++ + G +LE + + + P Sbjct: 144 KIRSGWDGNNINVEETVRIIKEAGASAVFVHGRTRAQGYVGPSNLEYIARAKAAAGKDFP 203 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + +G + E DG L A +++ YL Sbjct: 204 VFGNGDVFSPEAAKLMLDSTGCDGVLVARGTMGAPWIARQIEDYL 248 Score = 91.1 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 5/103 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-RVVDKSWVSRVAEVI--D 74 VK + I ++ + E GA + + T + + +++R D Sbjct: 143 VKIRSGWDGNNI-NVEETVRIIKEAGASAVFVHGRTRAQGYVGPSNLEYIARAKAAAGKD 201 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 P G + S E A +L G D + + + P + ++ Sbjct: 202 FPVFGNGDVFSPEAAKLMLDSTGCDGVLVARGTMGAPWIARQI 244 >UniRef50_C1ZB06 tRNA-dihydrouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZB06_PLALI Length = 381 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 45/178 (25%), Gaps = 6/178 (3%) Query: 74 DIPFCVAG-GIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + + G + AA+ L G + + +N R G Sbjct: 106 PLSVQLFGADPTHVATAARWLEDLGYEGVDLNMGCPMAKVNSQGGGARLMCDP--TGATR 163 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDL 190 + ++ ++ GA I ++ + +G Sbjct: 164 LVALVVASVSIPVTVKMRLGWDAQSLSAPLLARQFEEVGAAAITIHGRTRAQGFSGKVSR 223 Query: 191 EQLKKVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 E + +P+I +G T+E + R+ +L + Sbjct: 224 EGIAATVAAVQSIPVIGNGDVRTVEDAISMRRETGCAAVAIGRGAMLDPWIFRKLHDF 281 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 4/102 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI-DI 75 VK + + + + LA+++ E GA + + T + V + ++ + I Sbjct: 178 VKMRLGWDAQSLSAPL-LARQFEEVGAAAITIHGRTRAQGFSGKVSREGIAATVAAVQSI 236 Query: 76 PFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRL 116 P G ++++EDA + G ++I A+ DP + +L Sbjct: 237 PVIGNGDVRTVEDAISMRRETGCAAVAIGRGAMLDPWIFRKL 278 >UniRef50_C9LMP9 tRNA-dihydrouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMP9_9FIRM Length = 330 Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 47/166 (28%), Gaps = 3/166 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + GAD + IN + D + V A T + Sbjct: 86 AKVMEKAGADIVDINMGCPMQKVVKN--GDGSALMKNVTLAAEIISAVTAAVKIPVTIKM 143 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 ++ + GA I ++ ++ G D ++KKV + +P+I + Sbjct: 144 RLGWSRDTINAVELAMAAESAGAAAITVHGRTREDFYMGTADWREIKKVVDAVRIPVIGN 203 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 G G + G + YL T + Sbjct: 204 GDVGDGPAAKALMEETGCAAVAIGRAAWGNPWVFGAVNTYLETGEI 249 Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 25/152 (16%), Positives = 49/152 (32%), Gaps = 5/152 (3%) Query: 2 LAKRIIPCLD--VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDG 58 LA II + V+ +K + V LA GA + + T Sbjct: 123 LAAEIISAVTAAVKIPVTIKMRLGW-SRDTINAVELAMAAESAGAAAITVHGRTREDFYM 181 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA 117 D + +V + + IP G + A ++ G ++I A +P + + Sbjct: 182 GTADWREIKKVVDAVRIPVIGNGDVGDGPAAKALMEETGCAAVAIGRAAWGNPWVFGAVN 241 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 I+ G + H++ ++ Sbjct: 242 TYLETGEILPGPSWEERLAMARKHLHGLCVEK 273 >UniRef50_B9L781 tRNA-dihydrouridine synthase B n=1 Tax=Nautilia profundicola AmH RepID=B9L781_NAUPA Length = 313 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 45/169 (26%), Gaps = 8/169 (4%) Query: 84 KSLEDAAKILSFG-----ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 ++E+A K + D I IN + + + Sbjct: 75 NNVENAVKAVEIINELNWIDGIDINLGCPVNKARRSGFGGVLLKDENRDFLKEVVGTIVK 134 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVR 197 + E D + ++ G + ++ + G D +++KK Sbjct: 135 TSKKPVSAKMRIGFDKSVVE--DRAKLLEDLGIVFLTIHGRTVKQMYKGEADYDEIKKGV 192 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +P+IA+G E G + E+K Sbjct: 193 NAVKIPVIANGDITDYEKAKYVLEYTGASGVSIGRGAVGKPWIFLEMKQ 241 Score = 87.2 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 5/102 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + ++ D AK + G L + T + D + + + IP Sbjct: 143 KMRIGFDKSVVED---RAKLLEDLGIVFLTIHGRTVKQMYKGEADYDEIKKGVNAVKIPV 199 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 G I E A +L GA +SI A+ P + + Sbjct: 200 IANGDITDYEKAKYVLEYTGASGVSIGRGAVGKPWIFLEMKQ 241 >UniRef50_Q17M24 tRNA-dihydrouridine synthase n=2 Tax=Diptera RepID=Q17M24_AEDAE Length = 578 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 26/243 (10%), Positives = 70/243 (28%), Gaps = 16/243 (6%) Query: 19 KGVQFRNHEIIGDIVPLA------KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVA 70 K + F++ + + + E G D +G + + + R Sbjct: 223 KKINFKDKLYLS-PLTTVGNLPFRRICKEYGVDITCGEMACSVPIINGMMQEWALTKRHP 281 Query: 71 EVIDIPFCVAGG---IKSLEDAAKILSFGADKISINSPALADPTLITRLADRF-GVQCIV 126 + G + S D + +N D + I+ Sbjct: 282 SEDLFGVQICGHNQKLVSYATQVIAEHADVDFVDLNLGCPIDLIFNQGGGSALLRRRNIL 341 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + Y ++ + V + ++ GA + ++ ++ Sbjct: 342 EVMIQSCSRILADYDKEFTVKTRMGIYANKYVAHELVPKFEEWGASLVTIHGRTKEQRYT 401 Query: 187 -GYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGE 243 D + +++ + +P+ +G + +L+A A ++ G + + E Sbjct: 402 KKADWDYIRQCAQQAKSIPIYGNGDIFCYQDYLDAKERAPELAGVMVGRGALIKPWVFQE 461 Query: 244 LKA 246 +K Sbjct: 462 IKE 464 Score = 84.1 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 49/170 (28%), Gaps = 8/170 (4%) Query: 11 DVRDGQVVKGVQFRNH-EIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSR 68 D VK + + L ++ E GA + + T + D ++ + Sbjct: 354 DYDKEFTVKTRMGIYANKYVAH--ELVPKFEEWGASLVTIHGRTKEQRYTKKADWDYIRQ 411 Query: 69 VAEVI-DIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCI 125 A+ IP G I +D + + AL P + + ++ Sbjct: 412 CAQQAKSIPIYGNGDIFCYQDYLDAKERAPELAGVMVGRGALIKPWVFQEIKEQ-KNLDP 470 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 Y + + D T+ L+W + + ++ Sbjct: 471 SSSERMDMLKRYVNYGLEHWGSDTKGVENTRRFLLEWQSFLYRYVPSGLL 520 >UniRef50_C9RMP3 Dihydrouridine synthase DuS n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMP3_FIBSS Length = 392 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 37/128 (28%), Gaps = 1/128 (0%) Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 D + + ++ ++ + G + ++ + NG Sbjct: 142 HDVKAVLDAKTPEIPLTLKCRIGWDDDSINVMETLKIAEGEGVEMLTVHGRTRLQGYNGL 201 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + + + KV +P+I +G ++E E V G G++ Sbjct: 202 ANWDWIGKVAAAAKIPVIGNGDVNSVECARERINTYGVSGVSIGRGAMHNPWIFGQIADA 261 Query: 248 LATQGVEI 255 + + Sbjct: 262 WEGREKHV 269 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 8/160 (5%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + +++ K EG + L + T + + W+ +VA IP Sbjct: 160 KCRIGWDD-DSINVMETLKIAEGEGVEMLTVHGRTRLQGYNGLANWDWIGKVAAAAKIPV 218 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + S+E A + ++ G +SI A+ +P + ++AD + A+ Sbjct: 219 IGNGDVNSVECARERINTYGVSGVSIGRGAMHNPWIFGQIADAWE-----GREKHVITAQ 273 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 Y + T+ + ++++ R VL Sbjct: 274 EALDVFPLYYKFKIEDGATEMNAMGRMKQLAARLCKGFVL 313 >UniRef50_D2QXV2 Dihydrouridine synthase DuS n=4 Tax=Planctomycetaceae RepID=D2QXV2_9PLAN Length = 354 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 47/171 (27%), Gaps = 5/171 (2%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A ++ G D I IN L Q V + H+ Sbjct: 90 ALRLAEAGFDVIDINFGCPVKKVLGRCRGGFHLSQPDVALEIVRRTRDIVPAHIPVTVKM 149 Query: 149 ESRTRVTQWETLDWVQEVQ---KRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 TQ + + + G I ++ G L +V+ + Sbjct: 150 RRGLDDTQLSRDRFFEILDGAFAAGVAAITVHGRTVVQRYVGPSRWSFLTEVKRHVGSRV 209 Query: 205 I-ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 I SG + + L R+ VDG A + +A A + + Sbjct: 210 ILGSGDLFSAQDCLAMMRETGVDGVTVARGAIGNPWIFSQCRALDAGEPLP 260 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 39/116 (33%), Gaps = 8/116 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDG-RVVD 62 I+P VK + + + + G + + T Sbjct: 138 IVPA---HIPVTVKMRRGLDDTQLSRDRFFEILDGAFAAGVAAITVHGRTVVQRYVGPSR 194 Query: 63 KSWVSRVAEVIDIPFCVA-GGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 S+++ V + + G + S +D ++ G D +++ A+ +P + ++ Sbjct: 195 WSFLTEVKRHVGSRVILGSGDLFSAQDCLAMMRETGVDGVTVARGAIGNPWIFSQC 250 >UniRef50_B0SC53 tRNA-dihydrouridine synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SC53_LEPBA Length = 316 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 62/180 (34%), Gaps = 2/180 (1%) Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 + I + + ++A + S GA I IN A R + ++ Sbjct: 65 VKIQILGSDPNRMADNAHLVASLGAYGIDINFGCPAPTVNRNRGGAALLKEPNLMYSIVK 124 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LE 191 ++ T+ LD + +++ GA EIV++ + E Sbjct: 125 AVRNVVPENIPVTAKMRLGYESTEL-ALDCAKALEEGGAKEIVVHARTKTDGYKPPAYWE 183 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + K++ + + +IA+G T++ ++ + + D + +K L + Sbjct: 184 WIAKIKSILKINVIANGEIWTVQDAIQCQKISGCDDIMIGRGAVTNPSIALLIKKKLEER 243 Score = 89.1 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 66/190 (34%), Gaps = 23/190 (12%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + AK E GA E+V + T + W++++ ++ I Sbjct: 139 KMRLGYESTEL--ALDCAKALEEGGAKEIVVHARTKTDGYKPPAYWEWIAKIKSILKINV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I +++DA + G D I I A+ +P++ + + + Sbjct: 197 IANGEIWTVQDAIQCQKISGCDDIMIGRGAVTNPSIALLIKKKLEERM------------ 244 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV 196 + + E + V +++ L+ ++++ D +++K++ Sbjct: 245 -SWQKTKEVLSSYWLSMEPDVEAVSRVGRIKQW------LHYLSREYEEAQIDFQKIKRI 297 Query: 197 REVCHVPLIA 206 LI Sbjct: 298 SNPKDFELIY 307 >UniRef50_B8P5W1 Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P5W1_POSPM Length = 513 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 62/198 (31%), Gaps = 22/198 (11%) Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA---AKILSFGADKISINSPAL 107 +IT +G D+ + S E AK++ D + +N Sbjct: 81 NITLGEEGGPEDRPLI----------VQFCA--NSPEQLLKSAKVVEPYCDAVDVNLGCP 128 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 D +G + T +++ + R T +T+++ + ++ Sbjct: 129 QDIARRGH----YGSFLQDEWDLIYELINTLHRNLSIPVTAKFRVFPTVEKTVEYAKMLE 184 Query: 168 KRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + GA + + ++ D E+++ V+E +P+ A+G Sbjct: 185 RAGAQILTCHGRLREQRGHNTGLADWEKIRAVKEAVSIPVFANGNVLFHSDIERCLAATG 244 Query: 225 VDGALAASVFHKQIINIG 242 D ++A Sbjct: 245 ADAIMSAEGNLYNPAIFS 262 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 4/96 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 +FR + V AK GA L + G D + V E + IP Sbjct: 166 KFRVFPTVEKTVEYAKMLERAGAQILTCHGRLREQRGHNTGLADWEKIRAVKEAVSIPVF 225 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 G + D + L+ GAD I L +P + Sbjct: 226 ANGNVLFHSDIERCLAATGADAIMSAEGNLYNPAIF 261 >UniRef50_Q3MB47 Dihydrouridine synthase, DuS n=6 Tax=Bacteria RepID=Q3MB47_ANAVT Length = 378 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 23/213 (10%), Positives = 58/213 (27%), Gaps = 16/213 (7%) Query: 48 VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 + IT + GR V + IP V A ++ + + +N Sbjct: 62 ILAAITENDTGRPVFAQMIGE-----SIPDLV-------RTAKELCHYDIAGVDLNMGCP 109 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 A P + + + + T + + V Sbjct: 110 A-PRIYRKNVGGGLLLSPGKVEQILAELRQAVSDRPLTVKMRVGFENTD-TFYEILDIVN 167 Query: 168 KRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + + L+ + +G + + + + P++A+G + LE Sbjct: 168 RHNIDLLSLHGRTVKDMYHGAVKYDLIAEAVKRVDCPVLANGNIHSATTALEVLERTGAA 227 Query: 227 GALAASVFHKQIINIGELKAYLATQGV-EIRIC 258 G + +++ L + + + + Sbjct: 228 GVMVGRWAIGNPWLFNQIRQALRGEPITPVPLV 260 >UniRef50_Q6AJZ5 tRNA-dihydrouridine synthase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJZ5_DESPS Length = 328 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 63/209 (30%), Gaps = 15/209 (7%) Query: 43 GAD-----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDAAKILS 94 GAD + + + + ++ + E + F + G I + + Sbjct: 34 GADYTVSEMISCHGL---FYNQQRTLEMLASLPEERPVSFQLFGAEPDIM-AKATLILND 89 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 F D I IN + + + + Sbjct: 90 FQPDMIDINMGCPVRKVTKKGAGAALMSTPELAYDVIRSVVDN--TDIPVTVKFRAGVSS 147 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTM 213 T+ +++ ++ GA + ++ + +G D +K+V+E +P+I +G + Sbjct: 148 TELNGVEFGLMTERAGAAAVAVHGRTRAQAFSGVADRGIIKEVKEALSIPVIGNGDILSY 207 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIG 242 + L+ + DG + Sbjct: 208 QDGLDMMAETGCDGVMVGRGALGNPWVFQ 236 >UniRef50_Q9VPM1 CG3645, isoform A n=9 Tax=Diptera RepID=Q9VPM1_DROME Length = 505 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 49/158 (31%), Gaps = 7/158 (4%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 DAA + D + IN +G T + Sbjct: 99 DAALLAQDHCDAVDINLGCPQAIAKRGH----YGSFLQDEWELLTEIVSTLHAKLAVPVT 154 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPL 204 + R +T+ + + ++ G + ++ ++ + +K VR+ +P+ Sbjct: 155 CKIRIFEDLEKTIRYAKMLEAAGCQLLTVHGRTREQKGPLTGVANWNYIKNVRQHIKIPM 214 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +A+G ++ + VDG ++A Sbjct: 215 LANGNILALDDVHRCLTETGVDGVMSAEGNLHNPAIFK 252 Score = 89.1 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 4/119 (3%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 + R E + + AK G L + T G + + +++ V + I IP Sbjct: 156 KIRIFEDLEKTIRYAKMLEAAGCQLLTVHGRTREQKGPLTGVANWNYIKNVRQHIKIPML 215 Query: 79 VAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I +L+D + L G D + L +P + ++ Sbjct: 216 ANGNILALDDVHRCLTETGVDGVMSAEGNLHNPAIFKGVSPPVWQMAHEYLELVQLHPC 274 >UniRef50_A8Y3E7 Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8Y3E7_CAEBR Length = 283 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 56/157 (35%), Gaps = 1/157 (0%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 L +AA+++ + + +N + ++ + + D N Sbjct: 61 LAEAAEMVYSCSSGVDLNCGCPKH-DVRSKGFGSALLSKPELLADMVRQTRARISDENFS 119 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI 205 + R +T+D ++ + G + ++ D+E ++ V+ VP+I Sbjct: 120 VSLKIRVNKEIEKTVDLCRKAESAGVTHLTVHGRTPSQHAEPIDIEAIRLVKSAVKVPII 179 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 A+GG ++ + VDG +AA+ Sbjct: 180 ANGGITNLQEAMNLAEKTGVDGIMAANGLLDNPALFA 216 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 3/130 (2%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + R ++ I V L ++ G L + T S +D + V + +P G Sbjct: 123 KIRVNKEIEKTVDLCRKAESAGVTHLTVHGRTPSQHAEPIDIEAIRLVKSAVKVPIIANG 182 Query: 82 GIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 GI +L++A + G D I + L +P L + V + Sbjct: 183 GITNLQEAMNLAEKTGVDGIMAANGLLDNPALF--AGYEYTPSDCVESFMRLSREHGLDW 240 Query: 141 HVNQYTGDES 150 + Sbjct: 241 LLYHQHLQYM 250 >UniRef50_Q7QCT0 AGAP002791-PA (Fragment) n=3 Tax=Culicidae RepID=Q7QCT0_ANOGA Length = 396 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 56/189 (29%), Gaps = 10/189 (5%) Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 D +++ A I A++++ D + +N + Sbjct: 70 EFTTNEEDTPLIAQFAANNTI---------DFLSASEMVYPYVDGVDLNCGCPQRWAMAE 120 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 ++ + + T+D ++++ G + Sbjct: 121 GYGSALLKTPELIADMLGTVRRNMPSTFSVSVKVRLLSSTDHKRTIDMCRQLEATGITFL 180 Query: 175 VLNMMNQ-DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++ + + + L+++++ +P++A+G T++ + + DG + A Sbjct: 181 TVHGRTAPEMTKVPVHKDALQEIKQSIGIPMVANGDIFTLDDAEQMYLQTKCDGVMTARG 240 Query: 234 FHKQIINIG 242 Sbjct: 241 ILSNPALFA 249 Score = 84.1 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 2/126 (1%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPFCVAGGIKS 85 + + ++ G L + TA + V K + + + I IP G I + Sbjct: 160 TDHKRTIDMCRQLEATGITFLTVHGRTAPEMTKVPVHKDALQEIKQSIGIPMVANGDIFT 219 Query: 86 LEDAAKI-LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 L+DA ++ L D + L++P L + Y Sbjct: 220 LDDAEQMYLQTKCDGVMTARGILSNPALFAGHSSTPVECVKRWLNICQQADTDITYQCMH 279 Query: 145 YTGDES 150 + Sbjct: 280 HHFSFM 285 >UniRef50_C5CI99 Dihydrouridine synthase DuS n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI99_KOSOT Length = 314 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 68/220 (30%), Gaps = 11/220 (5%) Query: 41 EEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADK 99 E GAD + ++ G + + ++ + G I L AAK + A Sbjct: 25 EWGADFVFSEMLSVE--GVLRNDRTTQKIIPETPCRIQLFGNDIARLAMAAKAVLDKATW 82 Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 IN+ + + ++ G + E Sbjct: 83 FDINAGCPVKKVVKRGAGAALLREP--EKLNAMIQTLKGISDLPVSVKIRLGWDKN--EV 138 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH---VPLIASGGAGTMEH 215 + V+ + + I+++ +G D E + KV ++C + + SG + E Sbjct: 139 VKIVERLVESRPFAIMVHGRTVVQGYSGVADWESIGKVVKICKPHGIKVYGSGDVFSPEK 198 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +EAF VDG L A + K + Sbjct: 199 IVEAFEKYGVDGVLVARGAIGNPWIFSQYKELKQKGSYTV 238 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 39/105 (37%), Gaps = 8/105 (7%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVID-- 74 VK + ++V + +R E ++ + T D + +V ++ Sbjct: 127 VKIRLGWDK---NEVVKIVERLVESRPFAIMVHGRTVVQGYSGVADWESIGKVVKICKPH 183 Query: 75 -IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA 117 I +G + S E + +G D + + A+ +P + ++ Sbjct: 184 GIKVYGSGDVFSPEKIVEAFEKYGVDGVLVARGAIGNPWIFSQYK 228 >UniRef50_C5TM05 tRNA-dihydrouridine synthase C n=5 Tax=Neisseriaceae RepID=C5TM05_NEIFL Length = 321 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 59/169 (34%), Gaps = 4/169 (2%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + + FGADKI +N A + + ++ + H+ Sbjct: 81 ALEAVRFGADKIDLNFGCPAPTVNKHKGGAVLLKEPDLIYHIVHTLRQRLPQHIPLTAKM 140 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIAS 207 L+ ++ GA + ++ + E ++K+R+ ++P+ A+ Sbjct: 141 RLGYEDKSL-ALECASAIENGGACALTVHARTKVEGYEPPAHWEWVRKIRDAVNIPVTAN 199 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 G ++ +L+ + + + + ++K Y G ++ Sbjct: 200 GDVFNLQDYLDIKSVSGCNSVMLGRGAVIRPDLARQIKQY--ENGETVK 246 Score = 84.1 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 4/103 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPF 77 K + + + A GA L + T WV ++ + ++IP Sbjct: 139 KMRLGYEDKSL--ALECASAIENGGACALTVHARTKVEGYEPPAHWEWVRKIRDAVNIPV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADR 119 G + +L+D I S G + + + A+ P L ++ Sbjct: 197 TANGDVFNLQDYLDIKSVSGCNSVMLGRGAVIRPDLARQIKQY 239 >UniRef50_C6SB16 tRNA-dihydrouridine synthase B n=1 Tax=Neisseria meningitidis alpha153 RepID=C6SB16_NEIME Length = 207 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 10/118 (8%), Positives = 33/118 (27%), Gaps = 1/118 (0%) Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKV 196 + + + + G + ++ + + G E + + Sbjct: 1 MRQAYPLPSKPVWGWHDDHQNLPVIAKIAEDCGIAALAVHGRTRTQMYKGEARYELIAET 60 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + ++P+ +G + + + DG + + +LK Y + Sbjct: 61 KCRLNIPVWVNGDITSPQKAQAVLKQTAADGIMIGRGAQGRPWFFRDLKHYAEHGVLP 118 Score = 78.4 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 3/102 (2%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAG 81 + + V +AK + G L + T + + ++ ++IP V G Sbjct: 14 GWHDDHQNLPV-IAKIAEDCGIAALAVHGRTRTQMYKGEARYELIAETKCRLNIPVWVNG 72 Query: 82 GIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGV 122 I S + A +L AD I I A P L Sbjct: 73 DITSPQKAQAVLKQTAADGIMIGRGAQGRPWFFRDLKHYAEH 114 >UniRef50_Q6AKJ6 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKJ6_DESPS Length = 354 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 20/186 (10%), Positives = 52/186 (27%), Gaps = 7/186 (3%) Query: 76 PFCVAGGIKSLEDAAKILS----FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 P I ++ A L G D + IN A + Sbjct: 99 PLIYQLFIADVKYVAPALDKIHRLGGDGVDINLGCPAPSVRRGGAGAALAED--WDRVRD 156 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDL 190 + + + LD+ + ++ G + ++ + + Sbjct: 157 IVSSARRHTDLTLSAKIRVGHVGKEAHLLDFCKMLEAEGVDLLAVHARYHGEKFCRKPRW 216 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + L + E +P+ A+GG +++ + G + ++ E+ + Sbjct: 217 QLLAPICEQLDIPIFANGGIFSVDDARRCLELSGAAGLMLGRGAVERPWLFNEIAREVYG 276 Query: 251 QGVEIR 256 + + Sbjct: 277 LDLPVA 282 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 2/90 (2%) Query: 33 VPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + K EG D L + R ++ + E +DIP GGI S++DA + Sbjct: 185 LDFCKMLEAEGVDLLAVHARYHGEKFCRKPRWQLLAPICEQLDIPIFANGGIFSVDDARR 244 Query: 92 ILS-FGADKISINSPALADPTLITRLADRF 120 L GA + + A+ P L +A Sbjct: 245 CLELSGAAGLMLGRGAVERPWLFNEIAREV 274 >UniRef50_B8DSX5 Possible NifR3-like protein n=15 Tax=Bifidobacterium RepID=B8DSX5_BIFA0 Length = 417 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 26/229 (11%), Positives = 59/229 (25%), Gaps = 12/229 (5%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPF------CVAGGIKSLEDAAK 91 E G D L ++ + + + V I + A Sbjct: 68 LCEEYGPDGLYVAEMVTARALVERNPKALRLCRFAPSERIRSLQLYGVNPSIM-EQAARF 126 Query: 92 ILSFGA-DKISINSPALADPTLITRLADRFGVQ-CIVVGIDTWYDAETGKYHVNQYTGDE 149 ++ G D + +N + + I A ++ Sbjct: 127 LVDNGMMDHLDLNFGCPVPKVTRRGGGSALPWKTDLFTEIVQRVVAVCEPANIPVTAKIR 186 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASG 208 L+ + Q+ G + L+ G+ D ++ ++ +P+ +G Sbjct: 187 VGLDHEHETFLEAGRIAQEEGCSAVTLHARTTAEYYGGHSDWCRIGELVSTLDIPVFGNG 246 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 E + + G + G + G ++RI Sbjct: 247 DIWGAEDAIAMVNETGCAGVAIGRGCQGRPWLFGNIGNAF--AGSDVRI 293 Score = 78.4 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 52/185 (28%), Gaps = 9/185 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K +HE + + EEG + + T + D + + +DIP Sbjct: 184 KIRVGLDHE-HETFLEAGRIAQEEGCSAVTLHARTTAEYYGGHSDWCRIGELVSTLDIPV 242 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I EDA ++ G ++I P L + + F + + Sbjct: 243 FGNGDIWGAEDAIAMVNETGCAGVAIGRGCQGRPWLFGNIGNAFAGSDVRINPTLGEVGR 302 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV 196 H T + +++ + + E LK V Sbjct: 303 IIMRHAELLTEFYDGDE---RMAVHDLRKHVAWYLKGFPVGGSTRRAFME---CESLKDV 356 Query: 197 REVCH 201 RE Sbjct: 357 REQVD 361 >UniRef50_Q12U52 tRNA-dihydrouridine synthase n=2 Tax=Archaea RepID=Q12U52_METBU Length = 318 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 24/167 (14%) Query: 93 LSFGADKISI-----NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 ++ G I S L P L++ + V+ Sbjct: 97 INLGCPAPVITNAGCGSALLESPELVSDIFSTL------------------CEGVDTPVT 138 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 + R ++ TLD ++ G I ++ + +G D K ++E +P+I Sbjct: 139 AKIRVLESRAATLDMAHRLEDAGVCAITVHGRTCEQGYSGTADHSYAKLIKEELSIPVIV 198 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +G + DG + + YL V Sbjct: 199 NGDIRDGVSAEKVLEYTGCDGLMIGRAAMGDPHVFHRISRYLDDGEV 245 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 2/99 (2%) Query: 32 IVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + +A R + G + + T D S+ + E + IP V G I+ A Sbjct: 150 TLDMAHRLEDAGVCAITVHGRTCEQGYSGTADHSYAKLIKEELSIPVIVNGDIRDGVSAE 209 Query: 91 KILS-FGADKISINSPALADPTLITRLADRFGVQCIVVG 128 K+L G D + I A+ DP + R++ ++ Sbjct: 210 KVLEYTGCDGLMIGRAAMGDPHVFHRISRYLDDGEVIGC 248 >UniRef50_P33371 tRNA-dihydrouridine synthase C n=160 Tax=Gammaproteobacteria RepID=DUSC_ECOLI Length = 315 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 57/168 (33%), Gaps = 4/168 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+AA+ + G+ + +N + + ++ E H+ Sbjct: 78 AENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVS 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--GYDLEQLKKVREVCHVP 203 + + + VQ+ GA E+V++ ++ D + + +R+ ++P Sbjct: 138 VKVRLGWD-SGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIP 196 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +IA+G + + + D + N+ + Y + Sbjct: 197 VIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-NLSRVVKYNEPR 243 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 5/110 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEVIDI 75 VK + +A + GA ELV + T R +D + + + ++I Sbjct: 138 VKVRLGWDS--GEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNI 195 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 P G I + A + ++ G D + I AL P L + Sbjct: 196 PVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYNEPRMP 245 >UniRef50_B0S217 Nitrogen regulation protein n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=B0S217_FINM2 Length = 305 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 3/145 (2%) Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 I IN A P + D + + + A + Sbjct: 90 IDINMGCPA-PKIFKN-GDGSALMGDLNLAEDVIRACKNNTDLPVSVKFRLGIDENSMNY 147 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + Q ++ I L+ + +G D +K+V E +P+ +G T E + Sbjct: 148 MQLAQICERLKVDYITLHARTRKMFYSGEADWLHIKRVVENVDIPVFGNGDCFTKEDIRK 207 Query: 219 AFRDADVDGALAASVFHKQIINIGE 243 ++ DG L A + + Sbjct: 208 NMEYSNCDGVLLARGAMQNPFIFSD 232 Score = 80.3 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 3/98 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIP 76 VK + + + + LA+ D + + T D + RV E +DIP Sbjct: 134 VKFRLGIDENSM-NYMQLAQICERLKVDYITLHARTRKMFYSGEADWLHIKRVVENVDIP 192 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLI 113 G + ED K + D + + A+ +P + Sbjct: 193 VFGNGDCFTKEDIRKNMEYSNCDGVLLARGAMQNPFIF 230 >UniRef50_Q6C4K2 YALI0E26059p n=1 Tax=Yarrowia lipolytica RepID=Q6C4K2_YARLI Length = 359 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 58/173 (33%), Gaps = 6/173 (3%) Query: 74 DIPFCVAGGIKSLED---AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 D P V G + ED A K+L D + IN + + +V Sbjct: 98 DFPLIVQLGGNNAEDMVKAVKMLQPYVDGVGINCGCPIKEQIREGVGAALMTAPDLVAEM 157 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV-RNGYD 189 + + + +T+ + + V+ GA I ++ R + Sbjct: 158 VAAIRKECGAEIYVEVKMRIHKDLN--DTVHFAKLVEAAGADSISVHGRLVPQRSRTAPN 215 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +K V++ VP+IA+G A T + E DG +AA Sbjct: 216 YDGIKIVKDSVDVPVIANGDAFTTTNIEEIVELTGCDGVMAARGILSNPAMFA 268 Score = 80.3 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 10/159 (6%) Query: 21 VQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPFCV 79 V+ R H+ + D V AK GAD + + R + + V + +D+P Sbjct: 173 VKMRIHKDLNDTVHFAKLVEAAGADSISVHGRLVPQRSRTAPNYDGIKIVKDSVDVPVIA 232 Query: 80 AGGIKSLEDAAKILS-FGADKISINSPALADPTLI-------TRLADRFGVQCIVVGIDT 131 G + + +I+ G D + L++P + R + F G+ Sbjct: 233 NGDAFTTTNIEEIVELTGCDGVMAARGILSNPAMFAGYTKTPWRAVELFWDYVTAYGLPY 292 Query: 132 WYDAETGKYHVNQYTGDESRTR-VTQWETLDWVQEVQKR 169 + + ++ + R Sbjct: 293 ALTIHHFSEMLEAELTRYEKKDLNNCKNMVELINWFDDR 331 >UniRef50_Q2FS89 Histidine biosynthesis n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FS89_METHJ Length = 226 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 71/249 (28%), Gaps = 36/249 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII------GDIVPLAKRYAEEGADELVFYDITASSD 57 + D++ G++V G + D + + L D+ Sbjct: 1 MDLYLATDLKSGKIVHGKSGMRDRYVPVTSLHADTAEPIRFIEQMKPRFLYIADLDR-IC 59 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G + +AE + +L G + Sbjct: 60 GTGDHDPLIPELAERTE---------------RILLDRGCKG-------------PYDML 91 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 D FGV IV V + + ++ + ++L Sbjct: 92 DIFGVSMIVGTETAADTLAQFTKGVLSVDIKNDLVIPWNIDPVTFLSTCNRYRFEMVILL 151 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + + G G D E L + REV PL+ GG + E A DGA+ A+ H Sbjct: 152 DIGRVGTGRGLDKEMLSQFREVYTGPLLWGGGVSSEEDL-ALLEKAGFDGAIIATAVHSG 210 Query: 238 IINIGELKA 246 I + ++ Sbjct: 211 KIPVEYIRR 219 >UniRef50_Q6P1R4 tRNA-dihydrouridine synthase 1-like n=12 Tax=Euteleostomi RepID=DUS1L_HUMAN Length = 473 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 7/158 (4%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA + D I +N +G ++ Sbjct: 90 QAALLAQDYCDAIDLNLGCPQMIAKRGH----YGAFLQDEWDLLQRMILLAHEKLSVPVT 145 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPL 204 + R +T+ + Q ++K G + ++ ++ E +K VR+ +P+ Sbjct: 146 CKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKAVRKAVAIPV 205 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 A+G ++ RD V G ++A Sbjct: 206 FANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFE 243 Score = 91.5 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 44/177 (24%), Gaps = 24/177 (13%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---R 59 R+ P +D V A+ + G L + T G Sbjct: 147 KIRVFPEID-------------------KTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSG 187 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLAD 118 + V + + IP G I+ L+D + L G + L +P L + Sbjct: 188 AASWEHIKAVRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFEGRSP 247 Query: 119 RFGVQCIVVGIDTWYDAET-GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + +V Q + + G + Sbjct: 248 AVWELAEEYLDIVREHPCPLSYVRAHLFKLWHHTLQVHQELREELAKVKTLEGIAAV 304 >UniRef50_Q5KP54 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans RepID=Q5KP54_CRYNE Length = 610 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 48/157 (30%), Gaps = 7/157 (4%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AAK + D + IN +G T +++ Sbjct: 166 AAAKKVEHRCDAVDINFGCPQGIAKRGH----YGSFLQDEWELIHKLISTLHENLSVPVT 221 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN---GYDLEQLKKVREVCHVPL 204 + R +T+ + + ++ GA + + ++ D E +++V++ VP+ Sbjct: 222 AKFRIFPDLDKTIAYARMMEAAGAQILTCHGRTREMKGQNTGLADWEYIREVKKAVKVPV 281 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 A+G E DG + A Sbjct: 282 FANGNILYREDVDRCMEVTGCDGVMTAEGNLSNPAIF 318 Score = 90.7 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 4/97 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 +FR + + A+ GA L + T G+ D ++ V + + +P Sbjct: 223 KFRIFPDLDKTIAYARMMEAAGAQILTCHGRTREMKGQNTGLADWEYIREVKKAVKVPVF 282 Query: 79 VAGGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 G I ED + + G D + L++P + Sbjct: 283 ANGNILYREDVDRCMEVTGCDGVMTAEGNLSNPAIFM 319 >UniRef50_A8TG14 Histidine biosynthesis protein n=1 Tax=Methanococcus voltae A3 RepID=A8TG14_METVO Length = 148 Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 68/140 (48%), Gaps = 10/140 (7%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 + +AK + E GA+ L D+ + DG V+ V ++ + +P + GGI+++ED Sbjct: 3 YDNPDEIAKMWVENGAEMLHLVDLDGAIDGERVNLPMVKKIIQESKVPVQMGGGIRTIED 62 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 ++++ G +++ I + A+ +P + +LA + G + I+V +D + Sbjct: 63 VEELVNLGINRVIIGTVAVQNPDFVEKLAKKVGSEKIMVALD----------AKDGKVVI 112 Query: 149 ESRTRVTQWETLDWVQEVQK 168 + T++ + + ++K Sbjct: 113 KGWKEKTEYTPVQMGKYLRK 132 Score = 62.2 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 41/102 (40%), Gaps = 1/102 (0%) Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 + + + GA + L ++ +L +KK+ + VP+ GG T+E Sbjct: 3 YDNPDEIAKMWVENGAEMLHLVDLDGAIDGERVNLPMVKKIIQESKVPVQMGGGIRTIED 62 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 E + ++ + +V + + +L + ++ + + + Sbjct: 63 VEE-LVNLGINRVIIGTVAVQNPDFVEKLAKKVGSEKIMVAL 103 >UniRef50_Q2IG49 Dihydrouridine synthase TIM-barrel protein nifR3 n=4 Tax=Anaeromyxobacter RepID=Q2IG49_ANADE Length = 352 Score = 100 bits (249), Expect = 5e-20, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 50/160 (31%), Gaps = 3/160 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + GA I +N + G ++ A V Sbjct: 83 AVVAVQAGAGMIDVNMACPVKKVCGSGAGAAMGRDP--RKVEEAVRAIRAAVPVPVTVKI 140 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 + + +D + + GA + L+ + + +G E ++ V++ +P++ S Sbjct: 141 RAGWDEGEVNCVDVARAAEAGGAAAVALHGRTRSQLYSGKARWELVRAVKQAVAIPVLGS 200 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 G T + + D L A ELKA Sbjct: 201 GDVWTAGDAVRMREETGCDAVLVARGACGNPWIFRELKAI 240 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 3/102 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + V +A+ GA + + T S V V + + IP Sbjct: 138 VKIRAGWDEGEV-NCVDVARAAEAGGAAAVALHGRTRSQLYSGKARWELVRAVKQAVAIP 196 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLA 117 +G + + DA ++ G D + + A +P + L Sbjct: 197 VLGSGDVWTAGDAVRMREETGCDAVLVARGACGNPWIFRELK 238 >UniRef50_D1VTQ2 Probable tRNA-dihydrouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VTQ2_9FIRM Length = 310 Score = 100 bits (249), Expect = 6e-20, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 15/214 (7%) Query: 44 ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSF-GADKIS 101 A L F D + + + + ++S+ A+ +L+ I Sbjct: 36 ARALCFNDR--------KTLELLKKFPGEKNTGVQIFASDVESISKASYLLNDFDFSYID 87 Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 IN A + + G I + + + N+ ++R +LD Sbjct: 88 INMGCPA----PKIVKNGCGSALIKNPNLVYELVKGAVKNSNKKISIKTRKSFDNTLSLD 143 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 ++ Q GA + ++ +++ D + L K+++ +PLI +G T+E L Sbjct: 144 IIRAAQDAGAFAVTVHPRSREEYYKNKSDWQYLIKIKKFLTIPLIGNGDILTVEDALYKI 203 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + DVDG + + ++K L + E Sbjct: 204 KKYDVDGIAIGRGAIENPLIFSQIKKALKGEKYE 237 Score = 76.4 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 41/91 (45%), Gaps = 2/91 (2%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAA- 90 + + + + GA + + + + D ++ ++ + + IP G I ++EDA Sbjct: 142 LDIIRAAQDAGAFAVTVHPRSREEYYKNKSDWQYLIKIKKFLTIPLIGNGDILTVEDALY 201 Query: 91 KILSFGADKISINSPALADPTLITRLADRFG 121 KI + D I+I A+ +P + +++ Sbjct: 202 KIKKYDVDGIAIGRGAIENPLIFSQIKKALK 232 >UniRef50_C1MXD1 Dihydrouridine synthase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MXD1_9CHLO Length = 424 Score = 99 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 49/169 (28%), Gaps = 5/169 (2%) Query: 86 LEDAAKIL--SFGADKISINSPALADPTLITRLAD-RFGVQCIVVGIDTWYDAETGKYHV 142 LE A++L A ++ +N A+ V + Sbjct: 115 LEHCARVLARETRAPRVDLNCGCPANVVTGKGAGSSLLRDPNDVYACVSAIRRGCEGTGC 174 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 S + + Q+ GA + L+ + +G + + + E Sbjct: 175 VPTLKLRSGYDDDSL-LRENLLAAQEGGAAFVTLHPRTRRQGYSGRANWKDIAIAVETLD 233 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 VP+I +G + E + G + + + +KA L Sbjct: 234 VPVIGNGDVTSPERARALLFETGCAGIMVGRGAVQDPLVFRRIKAELRA 282 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 8/107 (7%) Query: 19 KGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDI 75 K D + E GA + + T + ++ E +D+ Sbjct: 179 KLRSG----YDDDSLLRENLLAAQEGGAAFVTLHPRTRRQGYSGRANWKDIAIAVETLDV 234 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFG 121 P G + S E A +L G I + A+ DP + R+ Sbjct: 235 PVIGNGDVTSPERARALLFETGCAGIMVGRGAVQDPLVFRRIKAELR 281 >UniRef50_UPI000179183B PREDICTED: similar to tRNA-dihydrouridine synthase 4-like (PP35) n=1 Tax=Acyrthosiphon pisum RepID=UPI000179183B Length = 350 Score = 99 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 5/170 (2%) Query: 76 PFCVAGGIKSLED---AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 P V G + D A+ ++ D + +N L + ++ Sbjct: 73 PLIVQFGANNSSDFVNASNLIIPYCDGVDLNCGCPQRWALNEGYGAQLLKNPEIIKD--C 130 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 N+ + R +++D Q+++ G I ++ D E Sbjct: 131 VRQLRNHLPTNKTISVKLRLLDDHRQSVDLCQQIEATGVSFITVHGRTALQKNEPIDQEC 190 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 LK + E VP+I +G + + G ++A Sbjct: 191 LKLINESVSVPVILNGDIKNLSDAITMQEYTGCRGMMSARGILHNPGLFA 240 Score = 86.4 bits (213), Expect = 8e-16, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 8/134 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPF 77 VK +H V L ++ G + + TA +D+ + + E + +P Sbjct: 146 VKLRLLDDHRQS---VDLCQQIEATGVSFITVHGRTALQKNEPIDQECLKLINESVSVPV 202 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 + G IK+L DA + G + L +P L + + D Sbjct: 203 ILNGDIKNLSDAITMQEYTGCRGMMSARGILHNPGLFA----GYQTTPLSAVQDWLNIKH 258 Query: 137 TGKYHVNQYTGDES 150 T + + Sbjct: 259 TNFLWFHHHLVFMC 272 >UniRef50_B7G230 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G230_PHATR Length = 545 Score = 99 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 77/253 (30%), Gaps = 32/253 (12%) Query: 19 KGVQFRNHEIIGDIVPLA------KRYAEEGAD----ELVFYDITASSDGRVVDKSWVSR 68 K + F + + + + GAD E+ T G+ + + + R Sbjct: 181 KLIDFSKKVYVA-PLTTVGNLPFRRIMKKFGADITCGEMAVA--TNLLSGQSSEWALLKR 237 Query: 69 VAEVIDIPFCVAGGI-----KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 E +A G ++ E D + +N D ++ Sbjct: 238 HPEEDIFGVQIAAGYPDVFARTCELIEN--EMNVDFVDLNLGCPLDIVCNKGSGAALMMR 295 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI---VLNMMN 180 + + + + +T+ + VQ++Q G I +++ + Sbjct: 296 D--KRLRSSVEGILETLTCPISIKMRTGWEMTKPFAHNLVQKIQSWGLDGISAVMIHGRS 353 Query: 181 QDGVR-NGYDLEQLKKVREV-----CHVPLIASGGAGTMEHFLEAFRDADVDG-ALAASV 233 + D + + V + +P+I +G + + F E V+ A+ A Sbjct: 354 RLQRYAKEADWDYISMVAKSQDMSLTTIPVIGNGDIFSYQDFEEKIAREGVNSCAMLARG 413 Query: 234 FHKQIINIGELKA 246 + E+K Sbjct: 414 ALIKPWLPTEIKE 426 >UniRef50_A9BIR6 Dihydrouridine synthase DuS n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIR6_PETMO Length = 301 Score = 99 bits (248), Expect = 8e-20, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 6/176 (3%) Query: 70 AEVIDIPFCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 +I + G + +AAK + A I IN+ + + ++G Sbjct: 55 KGEDNIGVQLFGNETTKFIEAAKSIQHLASWIDINAACPVNKVVKKGSGAALLKNPKLLG 114 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 K ++ G + R Q + + V+K GA I+++ + + +G Sbjct: 115 D----IVFNLKKSIDLPVGVKVRLGYDQINIEEVAETVEKAGADYIIVHGRTRSQMYSGI 170 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + E LKK++ +PL ASG + + + + D L A + Sbjct: 171 ANREILKKLKAKITIPLGASGDVFSKKDIDDYLLNYGADFVLVARGAIGNPWIFTK 226 Score = 83.8 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 7/109 (6%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVS 67 +D+ G V+ +I +A+ + GAD ++ + T S ++ + Sbjct: 123 SIDLPVGVKVRL-----GYDQINIEEVAETVEKAGADYIIVHGRTRSQMYSGIANREILK 177 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITR 115 ++ I IP +G + S +D +L++GAD + + A+ +P + T+ Sbjct: 178 KLKAKITIPLGASGDVFSKKDIDDYLLNYGADFVLVARGAIGNPWIFTK 226 >UniRef50_B9CKJ9 tRNA-dihydrouridine synthase B n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKJ9_9ACTN Length = 361 Score = 99.5 bits (247), Expect = 9e-20, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 58/217 (26%), Gaps = 15/217 (6%) Query: 45 DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADK----- 99 + + I G V + DI + G E + S A++ Sbjct: 68 EMVSVAGI---HFGGEKTWQLVYPLDPEPDIAVQLFG--SKPEQFREAASQIAERLGPKL 122 Query: 100 --ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 I IN + + A + V V Sbjct: 123 ALIDINMACPVPKVVKKGEGSALLDNPV--RAAEIVRACISEVDVPVTAKIRRGRTVGSE 180 Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHF 216 ++ + ++ GA + ++ + G D +++V +P+I SG + Sbjct: 181 CAPEFARALEAAGAAAVTVHGRFASQLYQGKADWNCVERVVCAVSIPVIGSGDVMSAHDA 240 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + + + A + + A + + Sbjct: 241 ARVLKTTGISAVMLARGTYGDPWIFANTRRACAEKEL 277 >UniRef50_Q30WR3 Dihydrouridine synthase family protein n=3 Tax=Deltaproteobacteria RepID=Q30WR3_DESDG Length = 376 Score = 99.5 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 44/159 (27%), Gaps = 3/159 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 A ++ S G + IN P I + + DA V + Sbjct: 129 AAAARRVESEGFFGVDINMGCSVAP--IVKKGCGADLLRDPERAVRMVDAVRRAVSVPVF 186 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPL 204 + ++ + +Q GA +V + D + + V++ +P+ Sbjct: 187 VKMRTGWSPDPEPAVNLARRLQDAGADALVFHPRVAPDRRTHRPRTAHIGLVKDAVDIPV 246 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 I +G DG + + + Sbjct: 247 IGNGDVFDAADCAAMLERTGCDGVSLGRLAIARPWIFAQ 285 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 3/109 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 VK V LA+R + GAD LVF+ A + + V + +DIP Sbjct: 187 VKMRTGW-SPDPEPAVNLARRLQDAGADALVFHPRVAPDRRTHRPRTAHIGLVKDAVDIP 245 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 G + D A +L G D +S+ A+A P + + F + Sbjct: 246 VIGNGDVFDAADCAAMLERTGCDGVSLGRLAIARPWIFAQWTRGFVPEK 294 >UniRef50_A3PE78 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus str. MIT 9301 RepID=A3PE78_PROM0 Length = 222 Score = 99.2 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 12/213 (5%) Query: 45 DELVFYDITA---SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKIS 101 DE++ +++ + +S + +P + G I+S+E+A ++ +FGADKI Sbjct: 15 DEILIINLSEKNWEEAYNNKFFNDISLLLSKTFLPITIGGKIRSIENAKELFNFGADKIL 74 Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 I+ D L+ + D +GVQ IVV D + + + V Sbjct: 75 ISRAFFQDQNLLKEIRDLYGVQSIVVQFDINSQNYDIFINSSLEKVSNLKKIVYSLN--- 131 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 +K GE+++N +++DG G++ E L + + ++PLIASGG G+ H E + Sbjct: 132 -----EKNLMGELIINQIDRDGTGFGHNTEYLNAIPK-LNMPLIASGGFGSSIHMAECLK 185 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + +++ + E + L E Sbjct: 186 FDSISAVATSNLLNFIGDAFSEARQELRKMNFE 218 Score = 41.0 bits (95), Expect = 0.044, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + + +P+ G ++E+ E F + D L + F + + E++ Sbjct: 36 FNDISLLLSKTFLPITIGGKIRSIENAKELF-NFGADKILISRAFFQDQNLLKEIRDLYG 94 Query: 250 TQGVEI 255 Q + + Sbjct: 95 VQSIVV 100 >UniRef50_Q2NEW9 Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NEW9_METST Length = 239 Score = 99.2 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 93/262 (35%), Gaps = 32/262 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEII-------GDIVPLAKRYAEEGADELVFYDIT 53 M+ IIP +D+ + V G R + + +A E+GA + D+ Sbjct: 1 MIFM-IIPVIDIMHNECVSGKSGRRSTYKKLRSIYGDNPLDIATALKEDGAQLIYIADLD 59 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + + IP + GI S+ED + + + + I Sbjct: 60 KIERIDDNNN---IISSINNIIPVMLDNGISSIEDIENNKNI-CSYNILATETMTSLDNI 115 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + ++ +VV ID +E + D + + K Sbjct: 116 EEIFKKYDSNKLVVSIDIKN--------------NELLVNNKDIDLEDVIYLINKYKPKY 161 Query: 174 IVLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ ++ G + G + ++++ +++ H +GG + +E + +++ L + Sbjct: 162 TIILNISYVGTKKGVNTNIIEEITKKIPHTKCCIAGGIRNSD--IETYTKKNINNFLIGT 219 Query: 233 VFHKQIINIGELKAYLATQGVE 254 + H+ ++ K Y+ ++ E Sbjct: 220 LLHEGNLSY---KLYMESKKNE 238 >UniRef50_B2JX56 Histidine biosynthesis protein n=6 Tax=Burkholderia RepID=B2JX56_BURP8 Length = 264 Score = 99.2 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 76/261 (29%), Gaps = 21/261 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAE-EGADELVFYDIT 53 ++IP LD+ DG V+ ++ + +A+ A L D+ Sbjct: 1 MQVIPVLDLLDGHAVRAIRGDRANYRPIQSSLCTTSQPLDVARALIATTAACALYVADL- 59 Query: 54 ASSDGRVVDKSWVSRVA----EVIDIPFCVAGGIKSLEDAAKILSFGADKISIN--SPAL 107 + D S ++ +A + + G L A + A Sbjct: 60 GAIMSGNADPSTLAALATSSDRSRPLEIWLDAGFADFPSMLAHLERIACAPNAAPKQAAP 119 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 R+ FG + + +D +A+ Y + E D ++ Sbjct: 120 EQAAPGARIVPVFGSESL-RSLDALREADAAGYAPILSLDHRHGQLIAAPELADALRSPA 178 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGGAGTMEHFLEAFRDADVD 226 +++ ++Q G G + + V + I +GG A R + Sbjct: 179 SWP-SRVIVMTLDQVGSDAGPNCDTFHHVHAQAGQRMTIGAGGIRHRGDLDAAAR-SGAH 236 Query: 227 GALAASVFHKQIINIGELKAY 247 L AS H + Sbjct: 237 AWLVASALHDGKLEPAAATRA 257 >UniRef50_D1AII6 Dihydrouridine synthase DuS n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AII6_SEBTE Length = 309 Score = 99.2 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 67/203 (33%), Gaps = 3/203 (1%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 D+ A + + R A + LE ++ G D I IN Sbjct: 32 MVDVNALKYSNQRTQDEILRKAGNEAVQIFGNKNEDFLEAVKLLIERGFDHIDINLGCPV 91 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + ++ V + + + + + + +V+ ++ Sbjct: 92 KKIIRAGKGSALLLESDFVKELLLKLKKEFRNDIKLSMKIRTGYK-NFSDPEYYVKLAEE 150 Query: 169 RGAGEIVLNMMNQDGVRNG-YDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVD 226 G +I ++ Q+ + +G D +KK++ + +V +I +G ++ E A D Sbjct: 151 YGLFQICIHGRTQEQLYSGQADWNIIKKMKQKHKNVKIIGNGDLTDLKTIKEKTDSAKPD 210 Query: 227 GALAASVFHKQIINIGELKAYLA 249 G + A + E K Y Sbjct: 211 GIMLARGLLGNPWLLKEAKDYFK 233 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 5/153 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI-DIP 76 K ++ D K E G ++ + T D + + ++ + ++ Sbjct: 130 KIRTG--YKNFSDPEYYVKLAEEYGLFQICIHGRTQEQLYSGQADWNIIKKMKQKHKNVK 187 Query: 77 FCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + L+ K S D I + L +P L+ D F + Sbjct: 188 IIGNGDLTDLKTIKEKTDSAKPDGIMLARGLLGNPWLLKEAKDYFKTGVFHESEVGREEI 247 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + Y ++ + + K Sbjct: 248 KNTLIKHINYCIEDKGEIRANLDMRKHIFWYLK 280 >UniRef50_C4QMR1 tRNA-dihydrouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4QMR1_SCHMA Length = 441 Score = 99.2 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 48/160 (30%), Gaps = 7/160 (4%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + AK++ D + +N +G +N Sbjct: 78 TFVRCAKLVQPFCDAVDLNLGCPQGIAKRGH----YGAFLQDEWNSLKEIISRASLELNV 133 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCH 201 + R T+ + + ++ GA + ++ ++ D Q++ V+E Sbjct: 134 PVTCKIRIFSDVERTVQYAKLLEAAGASMLTVHGRTREMKGQKTGLADWNQIRAVKEAVK 193 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +P+IA+G + + D ++A Sbjct: 194 IPVIANGNIQYLSDVHQCLDSTKADAVMSAEGHLHNPALF 233 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 52/179 (29%), Gaps = 10/179 (5%) Query: 4 KRII--PCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV- 60 K II L++ K F + V AK GA L + T G+ Sbjct: 121 KEIISRASLELNVPVTCKIRIF---SDVERTVQYAKLLEAAGASMLTVHGRTREMKGQKT 177 Query: 61 --VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA 117 D + + V E + IP G I+ L D + L AD + L +P L + Sbjct: 178 GLADWNQIRAVKEAVKIPVIANGNIQYLSDVHQCLDSTKADAVMSAEGHLHNPALFLGIQ 237 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR-GAGEIV 175 C + + E + Q G EI+ Sbjct: 238 PCIYDMCFEYLDLVEKYPTSMQIIRGHIFKLCHHALDEHSEYRSLIGTSQSTKGIKEIL 296 >UniRef50_B8EIK2 Histidine biosynthesis protein n=2 Tax=Beijerinckiaceae RepID=B8EIK2_METSB Length = 237 Score = 98.8 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 90/264 (34%), Gaps = 42/264 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP------------LAKRYAEEGADELVFYD 51 +IP +D++DG VV+ R + +A + + D Sbjct: 1 MEVIPVIDLKDGAVVRARLGRREFYA--PIESRLAATSAPGDIVAGLLSLHPFATIYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKI-SINSPALAD 109 + + D R + + + E + F V G+K +A L I + + L Sbjct: 59 LN-AIDARGDHEDVLFSLEEAFPQVEFWVDAGVKDAGEARSWLLRHKRAILVLGTETLGS 117 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + L + I++ +D + G + + Q Sbjct: 118 SATLEILK---DEERIILSLDFRGETFIGP---------------------EALLSAQHI 153 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 ++ + + G G DL ++ V+ + + A+GG E A A VDGAL Sbjct: 154 WPSRVIAMTLGRIGANAGPDLSRIASVKALSDRKVYAAGGVRGTEDL-AALDRAGVDGAL 212 Query: 230 AASVFHKQIINIGELKAYLATQGV 253 AS H + EL A + +G+ Sbjct: 213 VASALHDGQLTSQELAAPIMAKGI 236 >UniRef50_Q6A959 TIM-barrel enzyme, NifR3 family n=2 Tax=Propionibacterium acnes RepID=Q6A959_PROAC Length = 411 Score = 98.8 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 16/163 (9%), Positives = 39/163 (23%), Gaps = 4/163 (2%) Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV--NQYTGDE 149 +G + + +N P + + + A Sbjct: 127 CEKYGVNHVDLNFGCPV-PKVTRKGGGGVLPWKLDRFAAVVSAAVQAGDAHGVPVTVKTR 185 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASG 208 +D + GA + L+ G+ + + ++ + VP+I +G Sbjct: 186 IGIDPEHITYIDSARAAVDSGAAAVCLHARTVAEAYAGHSHWDAIGELVKTVDVPVIGNG 245 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + G + +L A + Sbjct: 246 DIWEASDAMAMVGQTGCAGVEVGRGCLGRPWLFRDLADAFAGR 288 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 3/105 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIP 76 VK + E I + A+ + GA + + T A + + + + +D+P Sbjct: 182 VKTRIGIDPEHIT-YIDSARAAVDSGAAAVCLHARTVAEAYAGHSHWDAIGELVKTVDVP 240 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRF 120 G I DA ++ G + + L P L LAD F Sbjct: 241 VIGNGDIWEASDAMAMVGQTGCAGVEVGRGCLGRPWLFRDLADAF 285 >UniRef50_A6DCX2 tRNA-dihydrouridine synthase B n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCX2_9PROT Length = 311 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 55/183 (30%), Gaps = 22/183 (12%) Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 + V + +IP+ I K G + + + + + Sbjct: 80 AIKAVEIINEIPWIDGIDINLGCPVNKARRSGYGGVLL---KDENKEKLKEIVSAI---- 132 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + + R + +D + ++ G + ++ + Sbjct: 133 --------------IKTSKKIVSAKMRLGYNEVVAVDRAKMLEDLGIKFLTVHGRTVKQM 178 Query: 185 RNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 G + +++KKV + ++P+IA+G + E + +G + E Sbjct: 179 YKGNANYKEIKKVVKEVNIPVIANGDITDYKKAKEVLEYTEANGVAIGRGVIGKPWIFLE 238 Query: 244 LKA 246 +K Sbjct: 239 MKQ 241 Score = 92.2 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 7/119 (5%) Query: 4 KRIIPCLDVRDGQVV--KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV- 60 K I+ + ++V K N + V AK + G L + T + Sbjct: 126 KEIVSAIIKTSKKIVSAKMRLGYNEVV---AVDRAKMLEDLGIKFLTVHGRTVKQMYKGN 182 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 + + +V + ++IP G I + A ++L A+ ++I + P + + Sbjct: 183 ANYKEIKKVVKEVNIPVIANGDITDYKKAKEVLEYTEANGVAIGRGVIGKPWIFLEMKQ 241 >UniRef50_A4S141 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S141_OSTLU Length = 307 Score = 98.8 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 50/158 (31%), Gaps = 7/158 (4%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AA +++ D + IN +G + + Sbjct: 88 AATMIAPYCDGVDINFGCPQRIAKRG----NYGAFLMDDWKTVEALIRKLDEELPVPVTA 143 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN---GYDLEQLKKVREVCHVPLI 205 + R TL + + V+ GA + ++ ++ R + ++ +++ VP++ Sbjct: 144 KIRVYDDLETTLKYAKMVEAAGAQIVAVHGRTREQKRCADIRANWAYIRAIKDALKVPVL 203 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 A+G ++ DG L+A + Sbjct: 204 ANGDIRSLAEARACLEATGADGVLSAEPLLSNPALFSD 241 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 4/96 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 + R ++ + + AK GA + + T + +++ + + + +P Sbjct: 144 KIRVYDDLETTLKYAKMVEAAGAQIVAVHGRTREQKRCADIRANWAYIRAIKDALKVPVL 203 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 G I+SL +A L GAD + P L++P L Sbjct: 204 ANGDIRSLAEARACLEATGADGVLSAEPLLSNPALF 239 >UniRef50_Q9JUP6 tRNA-dihydrouridine synthase C n=23 Tax=Neisseriaceae RepID=DUSC_NEIMA Length = 333 Score = 98.4 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 60/172 (34%), Gaps = 4/172 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 +A + + FGADKI +N A + + ++ E H+ Sbjct: 90 AANALEAVRFGADKIDLNFGCPAPTVNRHKGGAILLKEPELIFHIVKTLRERLPAHIPLT 149 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 + L+ + + GA + ++ + E ++K+R+ +P+ Sbjct: 150 AKMRLGYED-KSPALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVDIPV 208 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 A+G +++ ++ + + + + ++K Y G ++ Sbjct: 209 TANGDVFSLQDYIGIKTISGCNSVMLGRGAVIRPDLARQIKQY--ENGGPVK 258 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 5/115 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K +E + A AE GA L + T + W+ ++ + +DIP Sbjct: 151 KMRLG--YEDKSPALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVDIPV 208 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 G + SL+D I + G + + + A+ P L ++ + V D Sbjct: 209 TANGDVFSLQDYIGIKTISGCNSVMLGRGAVIRPDLARQIKQ-YENGGPVKDTDF 262 >UniRef50_C6C170 Dihydrouridine synthase DuS n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C170_DESAD Length = 323 Score = 98.4 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 58/200 (29%), Gaps = 4/200 (2%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLED-AAKILSFGADKISINSPALADPT 111 K+ ++ E + + GG + D +++ G +NS Sbjct: 45 GLKYDGKGTKALLATCPEDNPLVVQLFGGEPQDYSDTMPQLIDEGYSFFDLNSGCPVKKV 104 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 L T + + + L+ + ++ G Sbjct: 105 LKTGGGSALHLDPDRLVETASAMVRVAGEG-KVGVKIRLGFMNGEDNFLEIAKRLEDTGV 163 Query: 172 GEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 + ++ + +G D +L +++ +P+I SG T E +E + +DG + Sbjct: 164 AWLTMHPRYAKQMFSGQADWSKLAVLKQNVSIPVIGSGDLFTAEDGMECIKQTGIDGIMF 223 Query: 231 ASVFHKQIINIGELKAYLAT 250 A L Sbjct: 224 ARGALFDPEIFARYLKLLDD 243 Score = 87.2 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 60/192 (31%), Gaps = 12/192 (6%) Query: 14 DGQV-VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE 71 +G+V VK + + + +AKR + G L + A D S ++ + + Sbjct: 133 EGKVGVKIRLGFMNG-EDNFLEIAKRLEDTGVAWLTMHPRYAKQMFSGQADWSKLAVLKQ 191 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + IP +G + + ED + + G D I AL DP + R Sbjct: 192 NVSIPVIGSGDLFTAEDGMECIKQTGIDGIMFARGALFDPEIFARYLKLLDDPKCATLPP 251 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-D 189 ++ D + + + + K G I + D Sbjct: 252 FDLGKTMEEHINMTR--DFDGSNRSFRKIRSILPRYAK-GMDGI----RSIRTKLTACED 304 Query: 190 LEQLKKVREVCH 201 E+L + Sbjct: 305 WEELLEAAREVS 316 >UniRef50_UPI00016C52C4 dihydrouridine synthase DuS n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C52C4 Length = 326 Score = 98.4 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 48/182 (26%), Gaps = 6/182 (3%) Query: 73 IDIPFCV---AGGI-KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 +P V G + E A + GA + +N A + + Sbjct: 46 TGLPVQVQLLGGDSGRMAESAVRAHELGATAVDVNFGCPAPTVNRHDGGAALLRHPLRIR 105 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 HV T + + GA I ++ + Sbjct: 106 EIVGAIRAALPPHVPVSAKLRLGWD-TLDAIHENATMAAEGGAAWITIHGRTRVAGYAPP 164 Query: 189 -DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 E + +VRE +P++A+G T+E F + + A Sbjct: 165 IHWEPIGRVRERLGIPVVANGDIWTVEDFKRCRDVTGCKHFMLGRGALADPRLARRVAAE 224 Query: 248 LA 249 L Sbjct: 225 LG 226 Score = 91.1 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 53/156 (33%), Gaps = 6/156 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPF 77 K + A AE GA + + T + + + RV E + IP Sbjct: 124 KLRLGWDTLDAIH--ENATMAAEGGAAWITIHGRTRVAGYAPPIHWEPIGRVRERLGIPV 181 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGID--TWYD 134 G I ++ED + G + ALADP L R+A G+ V D + Sbjct: 182 VANGDIWTVEDFKRCRDVTGCKHFMLGRGALADPRLARRVAAELGLVPPVEETDEPFDWA 241 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 A+ + D R+ W++ + G Sbjct: 242 AQLRNLVEWSHRFDMLRSDKNVSRLKQWLRLASQFG 277 >UniRef50_Q00XL7 TRNA-dihydrouridine synthase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00XL7_OSTTA Length = 295 Score = 98.4 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 11/110 (10%), Positives = 33/110 (30%), Gaps = 2/110 (1%) Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKV 196 G + + ++ GA I+++ ++ D + ++++ Sbjct: 31 GIDGAPLTVKIRLGIESSS-PATKIAERLENAGAAAIIVHGRTKEQRYTKSADYDVIRQI 89 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +P+I +G T + + G + + E + Sbjct: 90 VSERAIPVIGNGDVLTWYDAQQRLDYSGCAGIMVGRGALIKPWIFKEFRE 139 Score = 87.6 bits (216), Expect = 3e-16, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 46/156 (29%), Gaps = 6/156 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK E +A+R GA ++ + T + D + ++ IP Sbjct: 39 VKIRLG--IESSSPATKIAERLENAGAAAIIVHGRTKEQRYTKSADYDVIRQIVSERAIP 96 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + + DA + L G I + AL P + ++ + A Sbjct: 97 VIGNGDVLTWYDAQQRLDYSGCAGIMVGRGALIKPWIFKEFREKKEWEPTAEDRVGRRSA 156 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 T + + + + ++ G Sbjct: 157 TTTGVSEDTTNSC-PGIKAFSVDIARF-PKLASAGV 190 >UniRef50_B9PUI2 Dihydrouridine synthase domain-containing protein, putative n=3 Tax=Toxoplasma gondii RepID=B9PUI2_TOXGO Length = 608 Score = 98.4 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 53/190 (27%), Gaps = 21/190 (11%) Query: 74 DIPFCVAGGI-KSLEDAAKILSFGADKISINSPA--------------LADPTLITRL-- 116 + G +L AA+++ + + +N L +P L+ + Sbjct: 210 PVFVQFCGDSPATLLAAAQLVEDEVEAVDVNFGCPQGIARRGHYGAFLLNEPELLVDIVS 269 Query: 117 -ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + + + +TL + G + Sbjct: 270 TLHKHLKTPVTCKMRKVSPRNPRDALPRSEAALVLDEERRLQDTLRLCDAFEAAGCACLC 329 Query: 176 LNMMNQDGVR---NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ ++ D ++ V++ +P+IA+G T E L D ++A Sbjct: 330 IHGRTKEEKAAFVGPCDWLAIRHVKQRLSIPVIANGAVETYEDALRCLEFTGADAVMSAE 389 Query: 233 VFHKQIINIG 242 + Sbjct: 390 GLLDNPMLFA 399 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 4/95 (4%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVA 80 + D + L + G L + T D + V + + IP Sbjct: 305 DEERRLQDTLRLCDAFEAAGCACLCIHGRTKEEKAAFVGPCDWLAIRHVKQRLSIPVIAN 364 Query: 81 GGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 G +++ EDA + L GAD + L +P L Sbjct: 365 GAVETYEDALRCLEFTGADAVMSAEGLLDNPMLFA 399 >UniRef50_Q9VIS4 CG10463 n=12 Tax=Drosophila RepID=Q9VIS4_DROME Length = 604 Score = 98.4 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 68/218 (31%), Gaps = 9/218 (4%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL-EDAAKIL 93 + E GAD G + + R + G ++ AA+++ Sbjct: 274 RICKEFGADITCGEMACAQPLLKGMGQEWALTKRHQSEDVFGVQLCGNNPNMLNQAAQVI 333 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + D I +N D + + ++ + T + + Sbjct: 334 HETAQVDFIDLNIGCPIDL-IYQQGGGSALMRRTNILELTVRSCAALSDRLPFTVKMRTG 392 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCH-VPLIASGG 209 + + + V++ GA + L+ +++ + +++ +P+I +G Sbjct: 393 IYADKSVAHELLPLVEEWGASAVTLHGRSREQRYTKHANWAYIEECAAKAKCMPVIGNGD 452 Query: 210 AGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELKA 246 + E ++E A V + + E+K Sbjct: 453 ILSYEDYMERRTLAPHVCSVMIGRGALIKPWIFQEIKE 490 Score = 88.0 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 10/158 (6%) Query: 18 VKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVID 74 VK V L E GA + + + + + +++ A Sbjct: 387 VKMRTG---IYADKSVAHELLPLVEEWGASAVTLHGRSREQRYTKHANWAYIEECAAKAK 443 Query: 75 -IPFCVAGGIKSLEDA--AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 +P G I S ED + L+ + I AL P + + ++ G Sbjct: 444 CMPVIGNGDILSYEDYMERRTLAPHVCSVMIGRGALIKPWIFQEIKEK-QAWSPSSGQRY 502 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + Y + + D T+ L+W + + Sbjct: 503 EMLQKFCNYGLEHWGSDTKGVETTRRFLLEWQSFLYRY 540 >UniRef50_A4S604 Predicted protein (Fragment) n=2 Tax=Mamiellales RepID=A4S604_OSTLU Length = 287 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 47/154 (30%), Gaps = 4/154 (2%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 FGAD + +N T L + ++ + + V Sbjct: 84 EFGADFVDLNCGCPIHETWKRGLGAALLKKPA--KLERLVEGIASRIDVPLTVKIRLGID 141 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGT 212 + + ++ GA +V++ ++ D + ++ + ++P+I +G T Sbjct: 142 SSSQ-ARRIAEGLENAGASAVVVHGRTKEQRYTKAADYDVIRDIVRERNIPIIGNGDVLT 200 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + V + + E + Sbjct: 201 WYDARDRMEHSGVAAMMVGRGALIKPWIFKEYRE 234 Score = 81.4 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 39/137 (28%), Gaps = 6/137 (4%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSR 68 +DV VK + +A+ GA +V + T + D + Sbjct: 128 IDVP--LTVKIRLGIDS--SSQARRIAEGLENAGASAVVVHGRTKEQRYTKAADYDVIRD 183 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVV 127 + +IP G + + DA + G + + AL P + +R V Sbjct: 184 IVRERNIPIIGNGDVLTWYDARDRMEHSGVAAMMVGRGALIKPWIFKEYRERKCWNPTVE 243 Query: 128 GIDTWYDAETGKYHVNQ 144 Y Sbjct: 244 QRVGVYYTLRNYMREGF 260 >UniRef50_Q4UGK9 Putative uncharacterized protein n=2 Tax=Theileria RepID=Q4UGK9_THEAN Length = 359 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 56/214 (26%), Gaps = 23/214 (10%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV---AGGIKSLEDAAK 91 L +RY+ AD + A + + D P + A+ Sbjct: 44 LCRRYS---ADLAYTPMLHAKIFSENENYRNIHFHTSSDDKPLIAQFCGNDPSAFILASS 100 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + I IN R ++ + Sbjct: 101 YIKNDVSAIDINLGCPQGIAKKGRYGSFLLEYPQLITKGFASVDTKFMLFTRGWLFS--- 157 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY---DLEQLKKVREVCHVPLIASG 208 VQ Q G + ++ ++ + D + +K ++ ++P+IA+G Sbjct: 158 -----------VQSCQANGCKALTVHGRHRSETKTRISECDWDSIKIIKSRVNIPVIANG 206 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G T E D +++ + Sbjct: 207 GIETFEDVKRCLDYTGADAVMSSEAILENPYLFS 240 >UniRef50_C8S7V0 HisA/hisF family protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7V0_FERPL Length = 223 Score = 98.0 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 30/253 (11%), Positives = 77/253 (30%), Gaps = 43/253 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLA----------KRYAEEGADELVFYDIT 53 ++ +DV+ G VV G + E + + + + E D+ Sbjct: 1 MKVYLAVDVKSGLVVWGKSGKRSEYV--PIERVSKVVRNSNLKEFFEELKVKRAYVADLD 58 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 +GR + + + ++ V GG KS+E+A Sbjct: 59 R-IEGRGSNLEVIDEIGRKVE--LIVDGGFKSVEEALNR--------------------- 94 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + + + + + ++ + Sbjct: 95 ----NFTPIFATETFDVRKLEGFESCMVSVDVKEKLLDASKSFGSLEELLEYLNSLKLKA 150 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +++ ++ G + +D L+K ++ + +I GG E + ++ + G + + Sbjct: 151 VIILPIHSVGTYS-FDFSLLEKALDILNHKIITGGGLK-PEDL-DVVKEMGIYGVIVGTA 207 Query: 234 FHKQIINIGELKA 246 FH+ I+ + Sbjct: 208 FHQGKIDPEIVLR 220 >UniRef50_A8QBG9 PP3111 protein, putative n=1 Tax=Brugia malayi RepID=A8QBG9_BRUMA Length = 513 Score = 97.6 bits (242), Expect = 3e-19, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 46/158 (29%), Gaps = 7/158 (4%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A +++ D + +N P LI + +G H Sbjct: 132 ACQLVESFCDGVDLNLGC---PQLIAKRGH-YGAYLQEDLKLICEMITLLHSHSRLPLSC 187 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLI 205 + R ET+ + + + K GA + ++ ++ D ++ V VP++ Sbjct: 188 KIRILQDINETVAYARALVKAGACMLTVHGRTREQRGPNTGLADWYAMRAVVSAVDVPVL 247 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 A+G ++A + Sbjct: 248 ANGNIQLPGDVDRCLEITGASAIMSAEGILSNPYLFEK 285 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFC 78 + R + I + V A+ + GA L + T G + D + V +D+P Sbjct: 188 KIRILQDINETVAYARALVKAGACMLTVHGRTREQRGPNTGLADWYAMRAVVSAVDVPVL 247 Query: 79 VAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 G I+ D + L GA I L++P L + Sbjct: 248 ANGNIQLPGDVDRCLEITGASAIMSAEGILSNPYLFEK 285 >UniRef50_C6QGP7 Histidine biosynthesis protein n=3 Tax=Rhizobiales RepID=C6QGP7_9RHIZ Length = 235 Score = 97.6 bits (242), Expect = 4e-19, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 86/260 (33%), Gaps = 40/260 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---------GDIVPLAKRYAE-EGADELVFYDIT 53 IIP +DV G+VV+ +Q + + + +A+ D+ Sbjct: 1 MDIIPVIDVSRGKVVRAIQGKRAAYLPIETPLAATSEPGDVARGLRSLYPFRRAYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVID---IPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 +GR + V +++ + + G +S A +L+ + + S +L Sbjct: 61 G-IEGRGRNTHLVPELSQALPNTELWIDAGTGSRSA--ARAVLAAPVATLVVGSESLESV 117 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 ++ + ++ + + + Sbjct: 118 RAWHEISAEAPGRTVLSLDFRGDEFMG----------------------PEALLADAALW 155 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGAL 229 +++ +++ G ++ L+ + + A+GG ++E A GAL Sbjct: 156 PTRVIVMTLDRIASEGGPNIALLETIAARAGGRRVYAAGGIRSLEDLAR-IGKAGAAGAL 214 Query: 230 AASVFHKQIINIGELKAYLA 249 AS+ H Q I+ G+LK Sbjct: 215 VASILHAQKISAGDLKEIAG 234 >UniRef50_O29545 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (HisA-1) n=1 Tax=Archaeoglobus fulgidus RepID=O29545_ARCFU Length = 223 Score = 97.2 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 80/254 (31%), Gaps = 45/254 (17%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI-----------IGDIVPLAKRYAEEGADELVFYDI 52 ++ +D++ G+VV G D + K E L D+ Sbjct: 1 MKVFFVVDIKSGKVVAGKGGERESYPPITAISRLVSSDDAL---KVIEEIKPRFLYAADL 57 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 G + S +S++++ ++ G +S E+ K+ + + L Sbjct: 58 DR-IVGLGDNFSLLSKLSKRVE-ELIADCGFRSPEELEKL----PFTPVVGTETFDITQL 111 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + + D S + E + ++ G Sbjct: 112 DRK--------------------CYVSLDFKEKFLDASGKFESWEEVVKFLNSFDLYG-- 149 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +++ ++ G DL L K E+ P++ GG +E ++ G L A+ Sbjct: 150 -LIVLPIHAVGAMK-PDLSVLTKTLELSEHPVMLGGGISGVEDLER-LKEMGCSGVLVAT 206 Query: 233 VFHKQIINIGELKA 246 HK I + ++ Sbjct: 207 AVHKGKIPLDVVRK 220 >UniRef50_UPI000186DA49 tRNA-dihydrouridine synthase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186DA49 Length = 332 Score = 97.2 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 58/170 (34%), Gaps = 5/170 (2%) Query: 76 PFCV---AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 P V A +AAK++ +D + +N ++ + I Sbjct: 68 PVIVQFAANNTFDFSEAAKLVFPFSDGVDLNCGCPQR--WAMKIGIGAQLLSEPETIKDI 125 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 + N + R T+D ++++K G + ++ ++ ++ Sbjct: 126 VLNVKNQISCNYSVSVKLRLLNDIKSTVDLCKKLEKTGVTFLTIHGRTKEQRSEPVNIAA 185 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +K + + +P+IA+G T++ + G ++A + Sbjct: 186 IKDIVDSVQIPIIANGDVKTLQDAQLLQQLTGCQGVMSARGLLQNPSLFQ 235 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 4/132 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPF 77 VK I V L K+ + G L + T V+ + + + + + IP Sbjct: 141 VKLRL---LNDIKSTVDLCKKLEKTGVTFLTIHGRTKEQRSEPVNIAAIKDIVDSVQIPI 197 Query: 78 CVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G +K+ + G + L +P+L + + Sbjct: 198 IANGDVKTLQDAQLLQQLTGCQGVMSARGLLQNPSLFQGYNETPLECVKKWVDISLNSNI 257 Query: 137 TGKYHVNQYTGD 148 + Sbjct: 258 HFTTFHHHLVFM 269 >UniRef50_UPI00006A5AE6 PREDICTED: similar to PP3111 protein n=1 Tax=Ciona intestinalis RepID=UPI00006A5AE6 Length = 474 Score = 97.2 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 20/169 (11%), Positives = 46/169 (27%), Gaps = 15/169 (8%) Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + D + IN +G + ++ + R Sbjct: 94 LAQDHCDAVDINLGCPQTIAKRG----NYGAFLGENWELVTKLIKACHEKLSVPVTCKIR 149 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLIASG 208 +T+ + + +++ G + ++ ++ E +K V++ +P+ A+G Sbjct: 150 IFTDVEKTVQYAKMIERAGCQLLTVHGRTKEMKGPMTGLASWEHIKAVKDAVKIPVFANG 209 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQI--------INIGELKAYLA 249 VDG + A I YL Sbjct: 210 NIQYKADVDRCINQTGVDGVMIAEGNLHDPCLFVGKKTIIWEIALEYLQ 258 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 37/146 (25%), Gaps = 4/146 (2%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFC 78 + R + V AK G L + T G + + V + + IP Sbjct: 147 KIRIFTDVEKTVQYAKMIERAGCQLLTVHGRTKEMKGPMTGLASWEHIKAVKDAVKIPVF 206 Query: 79 VAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAET 137 G I+ D + ++ G D + I L DP L + Sbjct: 207 ANGNIQYKADVDRCINQTGVDGVMIAEGNLHDPCLFVGKKTIIWEIALEYLQCAVKYPCP 266 Query: 138 GKYHVNQYTGDESRTRVTQWETLDWV 163 Y D + Sbjct: 267 ASYARGHVFKICHHGLQRHTRARDLL 292 >UniRef50_Q09504 Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2 n=2 Tax=Chromadorea RepID=YQI2_CAEEL Length = 284 Score = 97.2 bits (241), Expect = 5e-19, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 1/157 (0%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 L +AA+++ + + +N + ++ + + D + Sbjct: 63 LSEAAEMVYKCSTGVDLNCGCPKH-DVRSKGFGSALLSKPELLADMVRQTRARIPDPDFS 121 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI 205 + R +T+D ++ + G + ++ D++ L+ V++ VP+I Sbjct: 122 VSLKIRINHDIEKTVDLCRKAEAAGVTHLTVHGRTPSQRAEPIDIQALRIVKDSVSVPII 181 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 A+GG T E L VDG +AA+ Sbjct: 182 ANGGITTREEALFLAEQTGVDGIMAANGLLDNPALFA 218 Score = 87.2 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 3/130 (2%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + R + I V L ++ G L + T S +D + V + + +P G Sbjct: 125 KIRINHDIEKTVDLCRKAEAAGVTHLTVHGRTPSQRAEPIDIQALRIVKDSVSVPIIANG 184 Query: 82 GIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 GI + E+A + G D I + L +P L V + Sbjct: 185 GITTREEALFLAEQTGVDGIMAANGLLDNPALF--AGHEHTPSDCVENFMRLSREYGLDW 242 Query: 141 HVNQYTGDES 150 + Sbjct: 243 LLYHQHLQYM 252 >UniRef50_Q010A0 tRNA-dihydrouridine synthase (ISS) n=2 Tax=Mamiellales RepID=Q010A0_OSTTA Length = 639 Score = 96.8 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 64/220 (29%), Gaps = 11/220 (5%) Query: 37 KRYAEEGADELVF---YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-LEDAAKI 92 + + GAD + + G + + V R + GG + A++ Sbjct: 286 RICTDLGAD-ITVSEMAMASNLLKGDRKEWALVRRHPIEKCFGIQICGGYPDLMTRCAEL 344 Query: 93 L--SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 L D I +N D + V Sbjct: 345 LDNEVHCDFIDVNMGCPIDGVCAKGAGGSLMRDTDRLKRVVRSMTSVSSTPVTIKLRMGY 404 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC---HVPLIA 206 +++ D + + + GA L+ ++ + D + + + ++PLI Sbjct: 405 FDDPSRYVAHDIISKAKSWGAYAATLHGRTREQRYSRLADWSYIHRCADASALNNLPLIG 464 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +G T + + E + + + + + E+K Sbjct: 465 NGDVYTYQDWNEQIANEKISTCMIGRGAIIKPWLMTEIKE 504 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 7/152 (4%) Query: 18 VKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI-- 73 +K + + + + GA + T R+ D S++ R A+ Sbjct: 398 IKLRMGYFDDPSRYVAHDIISKAKSWGAYAATLHGRTREQRYSRLADWSYIHRCADASAL 457 Query: 74 -DIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 ++P G + + +D +I + I A+ P L+T + ++ I Sbjct: 458 NNLPLIGNGDVYTYQDWNEQIANEKISTCMIGRGAIIKPWLMTEIKEQ-RHWDISANERL 516 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 + Y + + D T+ L+W+ Sbjct: 517 DLFKDFVHYGLEHWGSDSVGVEKTRRYLLEWM 548 >UniRef50_A7H1K2 tRNA-dihydrouridine synthase B n=14 Tax=Campylobacter RepID=A7H1K2_CAMJD Length = 308 Score = 96.8 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 21/172 (12%), Positives = 56/172 (32%), Gaps = 7/172 (4%) Query: 78 CVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + L+ A ++L+ D I N + ++ + A ++ + + + Sbjct: 68 IAGGDKEVLKKAVQMLNKMDFVDGIDFNCGCPVNK-VVKQCAGSALLENLELFKNLVGVI 126 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 + + + G + ++ + + +G D E + Sbjct: 127 KENNKKSLTSVKFRLGFNEKY--PEKMAKICESLGVDFVSVHGRTRKQLYSGKADYESIA 184 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + +P+IA+G ++ E ++ DG + E+K+ Sbjct: 185 SAKASVKIPVIANGDI-NAQNAKEVYKITKCDGLMIGRASVGNPWIFYEIKS 235 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 46/159 (28%), Gaps = 6/159 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK N + +AK G D + + T D ++ + IP Sbjct: 137 VKFRLGFNEKY---PEKMAKICESLGVDFVSVHGRTRKQLYSGKADYESIASAKASVKIP 193 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I + ++A ++ D + I ++ +P + + V + Sbjct: 194 VIANGDI-NAQNAKEVYKITKCDGLMIGRASVGNPWIFYEIKSGKSVDEKLKKEIILTHF 252 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + H R + ++ + G I Sbjct: 253 DEMIKHYKDQGVSIFRKHLHEYSKGHKDASAFRDGVNRI 291 >UniRef50_Q5KPM6 Putative uncharacterized protein n=2 Tax=Filobasidiella neoformans RepID=Q5KPM6_CRYNE Length = 407 Score = 96.8 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 49/162 (30%), Gaps = 5/162 (3%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 KSL DAA+++S D I +N + + + + Sbjct: 162 KSLADAAELISPYVDGIDLNCGCPQRWAYNEGIGCALLRKP--ELVRDMVRGVKDRMGWG 219 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH- 201 + R Q +T + + G + ++ + +L +K + Sbjct: 220 WPVSIKIRIDSEQEKTEQLISNALQAGISHLTIHGRTRHQPSTDPVNLPGIKFAVDCVKG 279 Query: 202 -VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 VP +A+G +E + V G +AA Sbjct: 280 EVPCVANGDVWELEDARQMRLHTGVQGVMAARGLLANPALFA 321 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 32/110 (29%), Gaps = 13/110 (11%) Query: 18 VKGVQFRNHEII---------GDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVS 67 VK + L + G L + T V+ + Sbjct: 212 VKDRMGWGWPVSIKIRIDSEQEKTEQLISNALQAGISHLTIHGRTRHQPSTDPVNLPGIK 271 Query: 68 RVAEVID--IPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLIT 114 + + +P G + LEDA ++ L G + LA+P L Sbjct: 272 FAVDCVKGEVPCVANGDVWELEDARQMRLHTGVQGVMAARGLLANPALFA 321 >UniRef50_C4ZG69 APG10 (Albino and pale green 10); 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imid azole-4-carboxamide isomerase n=3 Tax=cellular organisms RepID=C4ZG69_EUBR3 Length = 261 Score = 96.8 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 90/269 (33%), Gaps = 27/269 (10%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP-----------LAKRYAEEGADELVFYDI 52 PC+D+ +G+ VK + + + GD A Y + G + Sbjct: 1 MEFRPCIDIHNGK-VKQIVGGSLKDRGDFASENFVSEQDSRFYADMYRKSGIKGGHIILL 59 Query: 53 TA--SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 + S + V + E V GGI + ++A + + GA + + S D Sbjct: 60 NSVDSEYYEDTKEQAVMAL-EAYPQGLQVGGGI-TADNAMEFIDAGAAAVIVTSYVFKDG 117 Query: 111 TLITRLADRFGVQCIVVGI--DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + +R + D + G+Y++ E LD + Sbjct: 118 RINYANLNRLKDTVGSDRLVLDLSCRKKDGQYYIVTDRWQNFTDEAVTTELLDKLSSY-- 175 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG- 227 E +++ ++ +G NG + E + + +P+ +GG + + + R + Sbjct: 176 --CCEFLVHAVDVEGRVNGIEKELVAMLGSWGRIPVTYAGGVSSFDDL-KCIRQLGQNHL 232 Query: 228 -ALAASV--FHKQIINIGELKAYLATQGV 253 S + ++ A+ + + Sbjct: 233 NVTIGSALDLFGGEMEYDKVIAFCNNKEI 261 >UniRef50_B7PD41 tRNA-dihydrouridine synthase, putative n=1 Tax=Ixodes scapularis RepID=B7PD41_IXOSC Length = 214 Score = 96.8 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 42/114 (36%) Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 D + + R +T+D Q+++ + ++ +D Sbjct: 17 RDMVHQTRNRLSDPGFTVSVKIRICEDMRKTVDMCQKLEAARVSFVTVHGRTKDQRSEPV 76 Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +LE +K V++ +P++A+G ++ +R +G +AA + Sbjct: 77 NLEAIKNVKDALRIPVVANGDVTSLREADRVYRATGTNGVMAARGLLENPAMFQ 130 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 35/96 (36%), Gaps = 1/96 (1%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 V+ R E + V + ++ + + T V+ + V + + IP Sbjct: 35 SVKIRICEDMRKTVDMCQKLEAARVSFVTVHGRTKDQRSEPVNLEAIKNVKDALRIPVVA 94 Query: 80 AGGIKSLEDAAK-ILSFGADKISINSPALADPTLIT 114 G + SL +A + + G + + L +P + Sbjct: 95 NGDVTSLREADRVYRATGTNGVMAARGLLENPAMFQ 130 >UniRef50_Q603E0 Putative HisA/HisF family protein n=1 Tax=Methylococcus capsulatus RepID=Q603E0_METCA Length = 227 Score = 96.5 bits (239), Expect = 7e-19, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 71/252 (28%), Gaps = 41/252 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAE-EGADELVFYDIT 53 +IIP LD+ G+VV V+ R D + + + D D+ Sbjct: 1 MKIIPVLDLMQGRVVHAVKGRRENYRPLSSPLCPDADPRAVVEAFRNLYRFDTFYIADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + G ++ + D L G P Sbjct: 61 -ALMGLGCQNELIAALRTAFP-------------DIVFWLDRGL------------PEAG 94 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 D ++ + + T + + Q Sbjct: 95 EAALDGVV--PVIGSESLPTVDRLQRMTTRDWILSLDFFDGTLKGCSRLLAQPQCWP-ER 151 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVP-LIASGGAGTMEHFLEAFRDADVDGALAAS 232 +++ +N+ G +G DL+ L +VR + LIA+GG E + L AS Sbjct: 152 VIVMTLNRVGSFDGPDLDLLDRVRRLTPHRALIAAGGVRDAGDL-EILERRGIHAVLVAS 210 Query: 233 VFHKQIINIGEL 244 H + + L Sbjct: 211 ALHSGSLELSRL 222 >UniRef50_UPI00015B403F PREDICTED: similar to MGC79829 protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B403F Length = 346 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 56/164 (34%), Gaps = 2/164 (1%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + +A ++++ ++ + +N L + + + Sbjct: 80 VDDFVEATEMVAPYSNGVDLNCGCPQRWALKDGYGADLLTKP--QLVKELVSNVRNRIPK 137 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV 202 + R +T+++ + ++ G + ++ D DL+ LK VR H+ Sbjct: 138 PFTVSVKIRILKDIKKTIEFSRAIEHAGVSFLTVHARTPDMRNEPIDLDSLKLVRSCVHL 197 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 P+IA+G + E + ++ +G + A K Sbjct: 198 PMIANGNVRSFEDAKTLYEESKCNGVMVAGGILTNPAIFSGYKN 241 Score = 80.3 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 39/130 (30%), Gaps = 1/130 (0%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 V+ R + I + ++ G L + T +D + V + +P Sbjct: 142 SVKIRILKDIKKTIEFSRAIEHAGVSFLTVHARTPDMRNEPIDLDSLKLVRSCVHLPMIA 201 Query: 80 AGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 G ++S EDA + + + + L +P + + + T + Sbjct: 202 NGNVRSFEDAKTLYEESKCNGVMVAGGILTNPAIFSGYKNTPVECIQDWLDITSTMSTQF 261 Query: 139 KYHVNQYTGD 148 + Sbjct: 262 MCMHHHLVFM 271 >UniRef50_C6XDW4 Histidine biosynthesis protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XDW4_METSD Length = 232 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 33/256 (12%), Positives = 73/256 (28%), Gaps = 38/256 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKR-YAEEGADELVFYDIT 53 IIP +D+ + VV + + + + D L D+ Sbjct: 1 MNIIPVIDLLEHHVVHAKRGERQHYRPIESGLCDSSQPLAITRALLELYPFDTLYIADLN 60 Query: 54 ASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + G+ ++ + + + + G K+ D + I S +L D Sbjct: 61 -AIQGKPAHVDEIALIRQHYPQLRIWLDAGFKNTRDLLPWSGLEVTPV-IGSESLPDIGA 118 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 L + + + + + + Sbjct: 119 YQELISEGVAHVLSLDFRGDRYQG-----------------------PEALLDNPRLWPQ 155 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGALAA 231 ++ + G G D +L+++ + L +GG + R+ + GAL A Sbjct: 156 LVIGMTLANVGSNQGPDHARLQQLVGMAQHGKLYGAGGVRDINDLQR-LREQGIAGALVA 214 Query: 232 SVFHKQIINIGELKAY 247 S H I+ ++ Sbjct: 215 SALHSGQISSQDIAHI 230 >UniRef50_B9K738 TIM-barrel protein, nifR3 family n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K738_THENN Length = 273 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 51/185 (27%), Gaps = 8/185 (4%) Query: 71 EVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 E ++ + G + L AA +LS I +N+ + + Sbjct: 22 EEKNVAVQIFGSDPEELSRAADVLSDEYPWIDLNAGCPVRKVVKKGAGGGLLRDLDLFRA 81 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-Y 188 Q + + + G E+ ++ G Sbjct: 82 VVKELR--KHVKGKFTVKTRLGWNENQIS--KIYEILVEEGVDEVFIHTRTVAQAFTGKA 137 Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 D + L + + +P SG + E A ++ G L A + ++K +L Sbjct: 138 DWKSLSVLDK--KIPTFVSGDIFSPEDAKRALEESGCHGVLVARGAIGRPWLFKQIKDFL 195 Query: 249 ATQGV 253 Sbjct: 196 ERGKY 200 Score = 76.8 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V+ VK N I I + EEG DE+ + T + D +S + Sbjct: 90 VKGKFTVKTRLGWNENQISKIYEI---LVEEGVDEVFIHTRTVAQAFTGKADWKSLSVLD 146 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFG 121 + IP V+G I S EDA + L G + + A+ P L ++ D Sbjct: 147 K--KIPTFVSGDIFSPEDAKRALEESGCHGVLVARGAIGRPWLFKQIKDFLE 196 >UniRef50_Q47C15 Dihydrouridine synthase, DuS n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C15_DECAR Length = 319 Score = 96.1 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 53/161 (32%), Gaps = 2/161 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+A ++++ + +N A R + ++ T H+ Sbjct: 79 AENARRLVALNPAGVDLNFGCPAPTVFRHRGGSALLGEPELLNEITSAVRSVVPAHIPFT 138 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 T +D Q ++ G E++++ + E + KVR+ H+PL Sbjct: 139 AKMRLGIDDTSR-AIDCAQALEAAGINELIVHGRTRSDGYRPPARWEWIDKVRDAIHIPL 197 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 IA+G T+E F + + ++ Sbjct: 198 IANGEVWTVEDFRNCQLATGCADIMVGRGAVADPLLARRVR 238 Score = 81.1 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 4/100 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + A+ G +EL+ + T S R W+ +V + I IP Sbjct: 140 KMRLGID--DTSRAIDCAQALEAAGINELIVHGRTRSDGYRPPARWEWIDKVRDAIHIPL 197 Query: 78 CVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRL 116 G + ++ED L+ G I + A+ADP L R+ Sbjct: 198 IANGEVWTVEDFRNCQLATGCADIMVGRGAVADPLLARRV 237 >UniRef50_A1VHK2 Dihydrouridine synthase, DuS n=10 Tax=Desulfovibrionaceae RepID=A1VHK2_DESVV Length = 449 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 56/205 (27%), Gaps = 6/205 (2%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDAAKILSFGADKISINSPALADP 110 + ++ E + + G I + +L G +N + P Sbjct: 68 GLIYYSPGTRDLLATTPEDAPLVVQLFGCDPDIM-VRAMEPLLEQGFRWFDLNMGC-SVP 125 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 ++ ++ + + V Q D + + G Sbjct: 126 KVVKTGCGAAMLRDVPQALAVARAMLRTAGAGRVGFKFRLGWDVGQEVWADLGRALADLG 185 Query: 171 AGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 AG + L+ +G L ++ VP+IASG T + R+ V + Sbjct: 186 AGWVTLHPRYARQGFSGEARWSTLGELVRAVSVPVIASGDLFTAADGVRCLRETGVASVM 245 Query: 230 AASVFHKQIINIGELKAYLATQGVE 254 A + +A + Sbjct: 246 YARGALNDPGVFHAHRERVAGRPDP 270 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 7/100 (7%) Query: 19 KGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDI 75 K +G V L + A+ GA + + A S + + + + Sbjct: 162 KFRLGW---DVGQEVWADLGRALADLGAGWVTLHPRYARQGFSGEARWSTLGELVRAVSV 218 Query: 76 PFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLIT 114 P +G + + D + G + AL DP + Sbjct: 219 PVIASGDLFTAADGVRCLRETGVASVMYARGALNDPGVFH 258 >UniRef50_D2QYD3 Histidine biosynthesis protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QYD3_9PLAN Length = 251 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 83/250 (33%), Gaps = 19/250 (7%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYA-EEGADELVFYDITA 54 R+IP +D+ G VV+GV R E + +A+ A L D+ A Sbjct: 8 RVIPVIDLLGGIVVRGVAGRRSEYRPLESQVTRSIEPAIVARDLVHATRATALYVADLDA 67 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 G+ + + GI S DA + + A I + + I Sbjct: 68 IQKGQRSL--SIYEQMGASGARLWLDVGIASRADALRFCAELAHS-EIPADLVIGLESIE 124 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 A + + D + + + L+ + G I Sbjct: 125 TAASLVELGAMA--RDELSGSAIFSVDMRAGQLISVAAELASRMPLELASLAVRSGFTRI 182 Query: 175 VLNMMNQDGVRNG-YDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +L ++ GV +G L +++R+ + +I GG + + L A A D L A Sbjct: 183 LLLDLSAVGVASGIPTLALARQLRDAWGSAIEIIVGGGVRSSDDLLAA-SQAGADAVLVA 241 Query: 232 SVFHKQIINI 241 S H + I Sbjct: 242 SAIHSRAIRF 251 >UniRef50_UPI00006DC778 hypothetical protein CdifQ_04001754 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DC778 Length = 164 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 5/158 (3%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI 75 + KG +F++ + L K Y++ GADELVFYDITAS++ R +V++VAE I+I Sbjct: 8 KSCKGKKFKDIVDVDSPEVLGKFYSDCGADELVFYDITASNEERKTSLEFVTKVAENINI 67 Query: 76 PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 PFCV GG+ LED IL GADK+SINS A+ +P LI + +FG QC+V+ ID + Sbjct: 68 PFCVGGGVNKLEDFTDILRKGADKVSINSSAVKNPELIREASLKFGAQCVVLSIDAKKNE 127 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 E + W L+ + +V + G Sbjct: 128 EGSW-----SVYVKGGREKLIWMQLNGLLKVVELGVRR 160 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 33/109 (30%), Gaps = 1/109 (0%) Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 + G + + V + GA E+V + LE + K Sbjct: 1 MSRCEKWKSCKGKKFKDIVDVDSPEVLGKFYSDCGADELVFYDITASNEERKTSLEFVTK 60 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 V E ++P GG +E F + R D S K I E Sbjct: 61 VAENINIPFCVGGGVNKLEDFTDILRK-GADKVSINSSAVKNPELIREA 108 >UniRef50_B8P3J2 Predicted protein (Fragment) n=3 Tax=Agaricomycetes RepID=B8P3J2_POSPM Length = 260 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 59/206 (28%), Gaps = 23/206 (11%) Query: 45 DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI---LSFGADKIS 101 D L F+ G D+ V + G E + + D I Sbjct: 41 DYLQFHLR---GLGEPNDRPVV----------VQLCG--NDPELVVRAGKQVQSHCDAID 85 Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 N + Q ++ + + V + TLD Sbjct: 86 FNLGCPQEAARDAHYGAYLLGQNDWPLVENIAASMSNSLTVPVSAKLRLCQPASA--TLD 143 Query: 162 WVQEVQKRGAGEIVLNMMN---QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + ++ GA + L+ + + DLEQ+K +++ +P+I++G E Sbjct: 144 LARRLEHAGASWVTLHARTVSVRRRRQGAADLEQIKTLKDNLSIPVISNGNVRVWEDVER 203 Query: 219 AFRDADVDGALAASVFHKQIINIGEL 244 DG + ++ Sbjct: 204 NLALTGADGIMVGESLLANPCLFADI 229 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 4/94 (4%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDIT---ASSDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 + + LA+R GA + + T D + + + + IP G + Sbjct: 136 QPASATLDLARRLEHAGASWVTLHARTVSVRRRRQGAADLEQIKTLKDNLSIPVISNGNV 195 Query: 84 KSLEDAAKILS-FGADKISINSPALADPTLITRL 116 + ED + L+ GAD I + LA+P L + Sbjct: 196 RVWEDVERNLALTGADGIMVGESLLANPCLFADI 229 >UniRef50_D2VPF2 Predicted protein n=2 Tax=Naegleria gruberi RepID=D2VPF2_NAEGR Length = 450 Score = 95.3 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 49/164 (29%), Gaps = 8/164 (4%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 ++ + + I +N R +G + + Sbjct: 174 VQCGKRVWDLSKQKISAIDLNLGCPQRIARRGR----YGSFLMEDLQTVHSIINKAHLEL 229 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVRE- 198 + R T+++V+ V GA + ++ ++ D ++ +RE Sbjct: 230 PMPVTAKIRIFEDLELTMNYVKTVVDAGAQVLCVHGRTREQKGANQNYADWTVIRAIREQ 289 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +P+IA+G T + + VD ++ + Sbjct: 290 FPQIPMIANGNIRTFQDVQDCLEYTRVDAVMSGEGLLENPALFN 333 Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 56/193 (29%), Gaps = 12/193 (6%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID- 74 K F + E+ + V K + GA L + T G D + + + E Sbjct: 236 KIRIFEDLELTMNYV---KTVVDAGAQVLCVHGRTREQKGANQNYADWTVIRAIREQFPQ 292 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G I++ +D L D + L +P L + ++ Sbjct: 293 IPMIANGNIRTFQDVQDCLEYTRVDAVMSGEGLLENPALFNGGQFVHPLDISDKYVNICK 352 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ- 192 ++ + + + D + K E + + E Sbjct: 353 THFPPDHNNIKRHLFRILDKYIPEDRSDLRGILGKASLWE---HYREFVDYARKIENEFD 409 Query: 193 LKKVREVCHVPLI 205 K++ + ++ Sbjct: 410 FKELEFEPSICVV 422 >UniRef50_A4EC62 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4EC62_9ACTN Length = 347 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 54/177 (30%), Gaps = 23/177 (12%) Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I A K+++ G S + P L ++ +A G H Sbjct: 105 DINMACPARKVVTKG-----EGSALMRTPDLAEKIV----------------EAAVGAAH 143 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC 200 V + Q ++ GA + ++ + G D + +V + Sbjct: 144 VPVTVKIRKGFYAEDRNAATFAQMLEGAGAAAVAVHGRCATQLYTGQADWSVVDEVADAV 203 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA-YLATQGVEIR 256 +P+I SG + E E + + A + G+ +A L V R Sbjct: 204 EIPVIGSGDVFSAEDAAEHLQGSGASAVFIARGIYGNPWVFGDARALALDGTPVPSR 260 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + E + A+ GA + + A+ D S V VA+ ++IP Sbjct: 148 VKIRKGFYAED-RNAATFAQMLEGAGAAAVAVHGRCATQLYTGQADWSVVDEVADAVEIP 206 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 +G + S EDAA+ L GA + I +P + Sbjct: 207 VIGSGDVFSAEDAAEHLQGSGASAVFIARGIYGNPWVFGDA 247 >UniRef50_A7I0T0 NifR3 family protein n=9 Tax=Epsilonproteobacteria RepID=A7I0T0_CAMHC Length = 310 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 59/188 (31%), Gaps = 8/188 (4%) Query: 63 KSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILS--FGADKISINSPALADPTLITRLADR 119 + + +AG K ++ A +IL+ G D I +N + Sbjct: 52 LKMIKKSENETPYFVQIAGSDPKIIKQAVEILNKIDGIDGIDLNCGCPVPKVVRQNAGSA 111 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 ++ K +YT + R ++ VQ GA I ++ Sbjct: 112 LLQNLDLLSK---LIEIIKKTSNKKYTSAKVRLGFDTKNPVNIALAVQNAGADFIAMHAR 168 Query: 180 NQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + G + D E + + +PLIA+G + ++ + D + Sbjct: 169 TRAGGYSAKPDYEAIAAAKSAVKIPLIANGNINS-QNANQILNLTKADALMIGRATIGNP 227 Query: 239 INIGELKA 246 E+K Sbjct: 228 WVFYEIKN 235 Score = 83.4 bits (205), Expect = 7e-15, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 41/143 (28%), Gaps = 4/143 (2%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 + V +A GAD + + T + D ++ + IP G I S Sbjct: 144 DTKNPVNIALAVQNAGADFIAMHARTRAGGYSAKPDYEAIAAAKSAVKIPLIANGNINSQ 203 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + AD + I + +P + + + + V + + Sbjct: 204 NANQILNLTKADALMIGRATIGNPWVFYEIK---NQKTVAVDEKIKKEIILAHFDEMIKF 260 Query: 147 GDESRTRVTQWETLDWVQEVQKR 169 + + + ++ + Sbjct: 261 YGDHGAVIFRKHLHEYSKGYADA 283 >UniRef50_C5F231 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=C5F231_9HELI Length = 317 Score = 94.9 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 25/231 (10%), Positives = 67/231 (29%), Gaps = 26/231 (11%) Query: 34 PLAKRYAEEGAD-----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPF-------CVAG 81 + K++ GAD + + + +K + + + P Sbjct: 26 EVVKKF---GADITVSEMISVHAL------AFKNKKTIKMIEKS---PLENPFALQIAGN 73 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 ++ A + L+ ++I I P + + Sbjct: 74 DFGIIQKAVEFLNEFKNEIQILDLNCGCPAPKVSSHGSGSSLLKDLNKLVKILQLLRETS 133 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREV 199 V Y + R + L+ + +V++ + D + ++ +++ Sbjct: 134 VFPYLSVKVRLGFDKKIPLEIANALNDSPIDYVVVHGRTKSDGYKKDKIDYDSIRLIKQN 193 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 PLIA+G + + + +G + ++ ++K L Sbjct: 194 IQHPLIANGEITSPQIAKKVQELTGAEGVMIGRAAIEKPWIFTQIKNNLEE 244 Score = 83.0 bits (204), Expect = 9e-15, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 6/107 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR--VVDKSWVSRVAEVIDI 75 VK + +I + +A + D +V + T S + +D + + + I Sbjct: 140 VKVRLGFDKKI---PLEIANALNDSPIDYVVVHGRTKSDGYKKDKIDYDSIRLIKQNIQH 196 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFG 121 P G I S + A K+ GA+ + I A+ P + T++ + Sbjct: 197 PLIANGEITSPQIAKKVQELTGAEGVMIGRAAIEKPWIFTQIKNNLE 243 >UniRef50_B0SXE6 TIM-barrel protein, nifR3 family n=2 Tax=Caulobacteraceae RepID=B0SXE6_CAUSK Length = 335 Score = 94.9 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 47/167 (28%), Gaps = 2/167 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A GA I +N + + +A + + A V Sbjct: 87 ARMAAEAGAQIIDLNFGCPSK-QVTGGVASGSALMREPDLAEALVAAAVRAVDVPVTVKM 145 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 D + GA I ++ + G D + V+ VP++ + Sbjct: 146 RLGWDDDSRNAADIARRAVDAGAQAITVHGRTRCQFYKGVADWSAVAAVKAAVSVPVLVN 205 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 G + A + DG + + + ++A L +G Sbjct: 206 GDIIDGDTARLALEQSGADGVMIGRGVYGRPWIAQAIEAALNGEGFR 252 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + + +A+R + GA + + T + D S V+ V + +P Sbjct: 143 VKMRLGWDD-DSRNAADIARRAVDAGAQAITVHGRTRCQFYKGVADWSAVAAVKAAVSVP 201 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 V G I + A L GAD + I P + + Sbjct: 202 VLVNGDIIDGDTARLALEQSGADGVMIGRGVYGRPWIAQAI 242 >UniRef50_C1SJZ7 tRNA-dihydrouridine synthase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJZ7_9BACT Length = 340 Score = 94.5 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 21/179 (11%), Positives = 52/179 (29%), Gaps = 10/179 (5%) Query: 74 DIPFCVAGGIKSLEDAAKILS-----FGADKISINSPALADPTLITRLADRFGVQCIVVG 128 I + G E + + A+ + IN L + ++ V Sbjct: 74 PIGVQLFG--SKPEAYTEAIEVVQDYIKAEFVDINMGCPVKKVLKSGSGCA-MMKDPVNS 130 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 A+ V + ++ + GA + ++ + + +G Sbjct: 131 GKIVAAAKKALGDVPLTVKIRLGWDKKNLNYNEMIKIAYEEGAEAVTVHGRTKTEMFSGV 190 Query: 189 -DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + + + +P+I +G + + + VDG + KQ + Sbjct: 191 VNYDLIADAKANAKLPIIGNGDVVDVATYEKML-ATGVDGVMIGRGMMKQPWLFESILN 248 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 52/150 (34%), Gaps = 2/150 (1%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIP 76 VK + + + + + K EEGA+ + + T + V + ++ +P Sbjct: 148 VKIRLGWDKKNL-NYNEMIKIAYEEGAEAVTVHGRTKTEMFSGVVNYDLIADAKANAKLP 206 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + + K+L+ G D + I + P L + + + + + Sbjct: 207 IIGNGDVVDVATYEKMLATGVDGVMIGRGMMKQPWLFESILNGRDPSGYMTYDKLYELIK 266 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + Y G+ + + +++ + Sbjct: 267 ELVRNEKIYKGEMFFLETVKKYIVWFLKGM 296 >UniRef50_B7FXL2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FXL2_PHATR Length = 233 Score = 94.5 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 23/194 (11%), Positives = 58/194 (29%), Gaps = 16/194 (8%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 G D+ ++++ G ++++ A + D I IN + Sbjct: 49 QYGPPQDRPLIAQIC---------GGDVQAVVACALAMQPYCDGIDINCGCPQNIAKRGN 99 Query: 116 LADRFGVQCIVVGIDTWY--DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 Q V+ + V + + +L ++ G Sbjct: 100 YGAFLLEQEDVLLPLVHTLLQHLSVPLSVKVRLLPAETRQASLEASLRLYTKLVDAGVHL 159 Query: 174 IVLNMMNQD--GVRNGY-DLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGA 228 + ++ + G G D + ++ V + +P+ A+GG ++ DG Sbjct: 160 LTIHGRTRHHKGPLTGAADWDAIRVVVDRLGQRIPIFANGGVASLRDAQACLATTHADGV 219 Query: 229 LAASVFHKQIINIG 242 +++ + Sbjct: 220 MSSEALLEYPALFA 233 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 6/83 (7%) Query: 38 RYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVID--IPFCVAGGIKSLEDAAKI 92 + + G L + T G D + V + + IP GG+ SL DA Sbjct: 151 KLVDAGVHLLTIHGRTRHHKGPLTGAADWDAIRVVVDRLGQRIPIFANGGVASLRDAQAC 210 Query: 93 LS-FGADKISINSPALADPTLIT 114 L+ AD + + L P L Sbjct: 211 LATTHADGVMSSEALLEYPALFA 233 >UniRef50_C0N3H2 Histidine biosynthesis protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3H2_9GAMM Length = 237 Score = 94.5 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 74/255 (29%), Gaps = 36/255 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAK-RYAEEGADELVFYDIT 53 +IIP +D+R G VV D+ + ++ D+ Sbjct: 1 MQIIPVIDIRGGIVVHARGGNRDAYSALNSVLTRSTDVFQVVNDILNWYPFEQFYIADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A + + + V F + GI S +D KI I S L +L+ Sbjct: 61 AIEAAKHRPEFYAELVHCFTGTQFWLDAGITSQKDLRLYSKLHNLKIVIGSETLKSLSLL 120 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + + + N E T T Sbjct: 121 E-----IEGARQSMILSLDRRGKQLLGAHNLLHRTELWTEQT------------------ 157 Query: 174 IVLNMMNQDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ ++ G G LE L+ + + + A+GG + + G L AS Sbjct: 158 -IVMDLDVIGANQGPSLEWLQALIAQRPDIEWYAAGGVRNKADLEQ-LQKIRAAGTLIAS 215 Query: 233 VFHKQIINIGELKAY 247 H I+ EL+ Sbjct: 216 ALHTGQIDKAELQKI 230 >UniRef50_D1AZV6 Dihydrouridine synthase DuS n=7 Tax=Campylobacteraceae RepID=D1AZV6_SULD5 Length = 312 Score = 94.5 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 52/175 (29%), Gaps = 6/175 (3%) Query: 78 CVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 V + S+++A IL+ G I +N + + Sbjct: 71 IVGSDLTSIKEAVLILNDMEGIAGIDLNCGCPVPKMVAQEAGSSLLLNL---DHMQRVIE 127 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 Y +YT + R + + GA + ++ + G D + + Sbjct: 128 TIKTYSNKRYTSAKVRLGFNTKIPELIAKACENAGADFMSMHGRTRSGAYKAEVDYQAIA 187 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + R +P+IA+G ++E L + +LK L Sbjct: 188 EARAAVKIPVIANGDITSLEKALHVMSVTGCKNLMIGRGALGNPWIFYQLKNGLH 242 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 5/131 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPF 77 K N +I +AK GAD + + T S + VD ++ + IP Sbjct: 141 KVRLGFNTKI---PELIAKACENAGADFMSMHGRTRSGAYKAEVDYQAIAEARAAVKIPV 197 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I SLE A ++S G + I AL +P + +L + ++ + Sbjct: 198 IANGDITSLEKALHVMSVTGCKNLMIGRGALGNPWIFYQLKNGLHHVEKTKILEIVLEHY 257 Query: 137 TGKYHVNQYTG 147 G Sbjct: 258 DAMVEFYGEKG 268 >UniRef50_B3LAS6 tRNA-dihydrouridine synthase, putative n=6 Tax=Plasmodium RepID=B3LAS6_PLAKH Length = 340 Score = 94.2 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 47/159 (29%), Gaps = 10/159 (6%) Query: 89 AAKILSFGADKISINSPALADPTLITR--LADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 A + + + + +N +V + + Sbjct: 98 AIEYIKNDVNAVDLNLGCPQQIAKKGNYGAFLLHKHDEVVNLVSDITNNCNIPITCKIRK 157 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVP 203 +TL+ ++Q R I ++ ++ D E +K ++E ++P Sbjct: 158 -----IDQDYQKTLNLCYDLQSRNVKMITVHGRTKEEKGVNIKECDYEIIKIIKERLNIP 212 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +IA+G E + D + A + ++ Sbjct: 213 IIANGSIEHFEDVQKCLNYTKADAVMCAEILLEKPYFFS 251 Score = 74.1 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 49/182 (26%), Gaps = 11/182 (6%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGG 82 + + L + + T G + D + + E ++IP G Sbjct: 159 DQDYQKTLNLCYDLQSRNVKMITVHGRTKEEKGVNIKECDYEIIKIIKERLNIPIIANGS 218 Query: 83 IKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I+ ED K L+ AD + L P + IV + Sbjct: 219 IEHFEDVQKCLNYTKADAVMCAEILLEKPYFFSN--QNVHAVDIVNEYYDLFLQYESNPK 276 Query: 142 V-----NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV 196 + + + L+ + +LN GV L ++ Sbjct: 277 YLKGHLFKMLYKYFQVHTDLRDLLNNCHSLDDYVNFRSILNERRTSGVLTESTLSWYRRY 336 Query: 197 RE 198 R+ Sbjct: 337 RK 338 >UniRef50_Q9CJW1 tRNA-dihydrouridine synthase C n=7 Tax=Gammaproteobacteria RepID=DUSC_PASMU Length = 312 Score = 94.2 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 52/168 (30%), Gaps = 4/168 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+A + + G+ I +N + + Q ++ T + Sbjct: 78 AENAQRAIELGSHGIDLNCGCPSKTVNGSNGGASLLKQPELIYHATKALRAAVPKALPVS 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--GYDLEQLKKVREVCHVP 203 + + + VQ+ GA EI ++ + + ++ VR+ +P Sbjct: 138 VKVRLGWDNS-EQAFEIADAVQQGGATEITIHGRTKMDGYRADRINWAKINDVRQRLSIP 196 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +IA+G + + + N+ ++ + + Sbjct: 197 VIANGEIWDWQSGQACLAETGCQDLMIGRGALNIP-NLSQVVKFNQAK 243 Score = 79.1 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 47/158 (29%), Gaps = 8/158 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEVIDI 75 VK + +A + GA E+ + T R ++ + ++ V + + I Sbjct: 138 VKVRLGWD--NSEQAFEIADAVQQGGATEITIHGRTKMDGYRADRINWAKINDVRQRLSI 195 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLAD---RFGVQCIVVGIDT 131 P G I + L G + I AL P L + + +++ + Sbjct: 196 PVIANGEIWDWQSGQACLAETGCQDLMIGRGALNIPNLSQVVKFNQAKMPWAEVLILLHQ 255 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + E + + + + + Sbjct: 256 YAHTENQFDTGFYHVARIKQWLGYLKKAYPQADALFQL 293 >UniRef50_O82782 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic n=33 Tax=cellular organisms RepID=HIS4_ARATH Length = 304 Score = 94.2 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 83/268 (30%), Gaps = 27/268 (10%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGD--------------IVPLAKRYAEEGADELV 48 A + PC+D+ G+ VK + + + AK Y E+G Sbjct: 43 AVQFRPCIDIHKGK-VKQIVGSTLRDLKEDGSVLVTNFESDKSAEEYAKMYKEDGLTGGH 101 Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 + A + + + + V GGI S E+ + GA + + S Sbjct: 102 VIMLGA---DPLSQAAAIGALH-AYPGGLQVGGGINS-ENCMSYIEEGASHVIVTSYVFN 156 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + + + IV D K + + + + E Sbjct: 157 NGKIDLE--RLKDIVSIVGKQRLILDLSCRKKDGRYAIVTDRWQKFSDVILDEKSLEFLG 214 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD--VD 226 + E +++ ++ +G + G D E + + +P+ +GG M+ VD Sbjct: 215 GFSDEFLVHGVDVEGKKLGIDEELVALLGNYSPIPVTYAGGVTVMDDVERIKDAGKGRVD 274 Query: 227 GALAASVF--HKQIINIGELKAYLATQG 252 S + ++ A+ Q Sbjct: 275 -VTVGSALDIFGGNLPYKDVVAWHHKQH 301 >UniRef50_A3JG66 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=A3JG66_9ALTE Length = 335 Score = 94.2 bits (233), Expect = 4e-18, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 2/166 (1%) Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 AK GA ++ IN A + + ++ T + + Sbjct: 82 AKAAELGATQVDINFGCPAKTVNKHKGGCVLMREPELMHEITAAVRQAVPADILVTAKMR 141 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASG 208 + Q + GAGEIV++ ++ E++ K RE +IA+G Sbjct: 142 LGYDDRSMG-VACAQALDAAGAGEIVIHARSKTDGYKPPAYWEEIAKAREAVKAKVIANG 200 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 T+ + + D + + +++A + +E Sbjct: 201 DIFTVADYWRCREVSGCDDVMIGRGLVARPDLARQIRASQRGESIE 246 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 4/100 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + +G V A+ GA E+V + + + +++ E + Sbjct: 139 KMRLGYDDRSMG--VACAQALDAAGAGEIVIHARSKTDGYKPPAYWEEIAKAREAVKAKV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 G I ++ D + G D + I +A P L ++ Sbjct: 197 IANGDIFTVADYWRCREVSGCDDVMIGRGLVARPDLARQI 236 >UniRef50_C0QXB6 Dihydrouridine synthase-like (DUS-like) FMN-binding domain protein n=2 Tax=Brachyspira RepID=C0QXB6_BRAHW Length = 325 Score = 93.8 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 57/188 (30%), Gaps = 11/188 (5%) Query: 71 EVIDIPFCVAGGIKSLEDAAKILS----FGADKISINSPALADPTLITRLADRFGVQCIV 126 + I + G + +D + + G I IN + Sbjct: 67 DEYPISLQLFG--ANEDDYKRAIEITDLSGFSFIDINMGCPTKKVVKNNGGAGLLEDT-- 122 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + + +A + + + ++ +++ GA + L+ + Sbjct: 123 DKMISVLNAVKSVSPLPVSVKIRLGLKRGEGGEIERALAMKENGACFLTLHGRYASDMYR 182 Query: 187 G-YDLEQLKKVREVCHVP--LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 G D E + K++E LI +G + E ++AF + VDG + E Sbjct: 183 GTADWEAIAKIKEALGEDYILIGNGDIKSKEDAVKAFDISKVDGIMVGRGAIGNPWIFTE 242 Query: 244 LKAYLATQ 251 L Sbjct: 243 LNTIFEDN 250 Score = 74.5 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 46/144 (31%), Gaps = 5/144 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI--D 74 VK G+ + A E GA L + AS R D ++++ E + D Sbjct: 142 VKIRLGLKRGEGGE-IERALAMKENGACFLTLHGRYASDMYRGTADWEAIAKIKEALGED 200 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 G IKS EDA K D I + A+ +P + T L F Sbjct: 201 YILIGNGDIKSKEDAVKAFDISKVDGIMVGRGAIGNPWIFTELNTIFEDNDEYNNKIDEK 260 Query: 134 DAETGKYHVNQYTGDESRTRVTQW 157 D + E V+ Sbjct: 261 DNLKNIIKEHINGCCELYGEVSGI 284 >UniRef50_Q884C6 tRNA-dihydrouridine synthase C n=13 Tax=Proteobacteria RepID=DUSC_PSESM Length = 317 Score = 93.8 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 2/169 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+AA GA + +N A +R + ++ + Sbjct: 78 AENAAFACELGAPVLDLNFGCPAKTVNRSRGGAILLKEPELLHTIVSQVRRAVPKDIPVT 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 T LD + + GA +IV++ + E + +++EV VP+ Sbjct: 138 AKMRLGYENTD-GALDCARALADGGAAQIVVHARTKVDGYKPPAHWEWIARIQEVVKVPV 196 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +A+G T+E + + + ++ A + V Sbjct: 197 VANGEIWTVEDWRRCREICGARDIMIGRGLVARPDLARQIAAAQKGEEV 245 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 4/133 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + A+ A+ GA ++V + T W++R+ EV+ +P Sbjct: 139 KMRLGYENTDG--ALDCARALADGGAAQIVVHARTKVDGYKPPAHWEWIARIQEVVKVPV 196 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I ++ED + GA I I +A P L ++A + +V Sbjct: 197 VANGEIWTVEDWRRCREICGARDIMIGRGLVARPDLARQIAAAQKGEEVVPMTWAELQPM 256 Query: 137 TGKYHVNQYTGDE 149 + Sbjct: 257 LRTFWQACLVKMT 269 >UniRef50_Q73RG6 Dihydrouridine synthase, putative n=1 Tax=Treponema denticola RepID=Q73RG6_TREDE Length = 337 Score = 93.8 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 48/191 (25%), Gaps = 13/191 (6%) Query: 67 SRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISI---NSPALADPTLITRLADRFGV 122 A + + G GI L+ G I + ++ A Sbjct: 69 KSAAACVPLLLQYGGFGID--------LNMGCCAPQIVNTGAGFAWMKKPLSETASLVSK 120 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 V + A + L + + + G I L+ Q Sbjct: 121 VKKAVLLYDEQKAGPQTEPIRLSVKLRLGEEENYDRLLSFCKMLVSEGVDLITLHPRTQK 180 Query: 183 GVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 + E ++ VP+ +G ++E + G + ++ Sbjct: 181 QKYSRPCKHEYTARLASDLSVPVYGNGDINSLETLEKIASKYPCAGWMIGRAAVQKPWIF 240 Query: 242 GELKAYLATQG 252 EL + G Sbjct: 241 YELSKGILKNG 251 Score = 78.4 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 36/115 (31%), Gaps = 3/115 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIP 76 VK ++ K EG D + + T R + +R+A + +P Sbjct: 144 VKLRLGEEENY-DRLLSFCKMLVSEGVDLITLHPRTQKQKYSRPCKHEYTARLASDLSVP 202 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 G I SLE KI + I A+ P + L+ D Sbjct: 203 VYGNGDINSLETLEKIASKYPCAGWMIGRAAVQKPWIFYELSKGILKNGTAEDKD 257 >UniRef50_Q1ZGI3 NifR3/Smm1 family protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGI3_9GAMM Length = 313 Score = 93.8 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 2/158 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A K L G+D I +N A ++ + + Sbjct: 81 ARKALLVGSDGIDLNFGCPAKAVNKSKGGAILLKSPETLYKIVKEVRASMHTCETLSVKI 140 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIAS 207 ++ Q + + GA E+ ++ ++ + K+RE +P+ A+ Sbjct: 141 RLGYADKSL-AIENAQAICEAGANELAVHARTKEEGYAPPAHWHWIAKIRESIDIPVTAN 199 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 G + E + + +K Sbjct: 200 GDIFSAEDAKRCHEISGCHSLMIGRGALATPNLAQVIK 237 Score = 87.6 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 4/102 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + A+ E GA+EL + T W++++ E IDIP Sbjct: 138 VKIRLGYADKSL--AIENAQAICEAGANELAVHARTKEEGYAPPAHWHWIAKIRESIDIP 195 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA 117 G I S EDA + G + I ALA P L + Sbjct: 196 VTANGDIFSAEDAKRCHEISGCHSLMIGRGALATPNLAQVIK 237 >UniRef50_D1U4K9 Dihydrouridine synthase DuS n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4K9_9DELT Length = 339 Score = 93.8 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 46/163 (28%), Gaps = 4/163 (2%) Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQC---IVVGIDTWYDAETGKYHVNQYTGD 148 ++ G +N+ L + + + + A Sbjct: 85 LVDLGYRNFDLNAGCPVRKVLKSGSGVKLMEDPDTLVRIASVMVERATAHARGGQVGVKF 144 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 L+ + ++ G + L+ + G D +L ++ +P++AS Sbjct: 145 RLGFDKGNDTYLELARRLEDAGVHWVTLHPRYGRQMFAGQADWSKLGLLKRAVSIPVVAS 204 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G T E + + VD + A + LA Sbjct: 205 GDLFTAEDGVRCVEETGVDAVMFARGALYDPAIFDRYRTLLAG 247 Score = 79.9 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 4/106 (3%) Query: 13 RDGQV-VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 R GQV VK + + LA+R + G + + D S + + Sbjct: 136 RGGQVGVKFRLGFDKGNDT-YLELARRLEDAGVHWVTLHPRYGRQMFAGQADWSKLGLLK 194 Query: 71 EVIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITR 115 + IP +G + + ED + G D + AL DP + R Sbjct: 195 RAVSIPVVASGDLFTAEDGVRCVEETGVDAVMFARGALYDPAIFDR 240 >UniRef50_B8C4H3 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C4H3_THAPS Length = 333 Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 54/161 (33%), Gaps = 6/161 (3%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 A K+L D + IN + R + I T +V Sbjct: 70 QAMKVLEPHVDGVDINCGCPQNIAKRGRYGAFLMEEDNGDKIVEIVQHLTANLNVPVSVK 129 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCH--V 202 ++L + + GA + ++ + + + + +++V ++ V Sbjct: 130 LRILPTG-IEDSLALYKRLVDAGAAMLTIHGRTRFQNKVDTGTANWDYIRQVVDLVGDRV 188 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 P+IA+G ++ + F VDG +++ + E Sbjct: 189 PVIANGNICNLDEVRKCFEVTGVDGVMSSEGILEYPPLFTE 229 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 6/93 (6%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAEVID--IPFCVAGGI 83 I D + L KR + GA L + T D + ++ +V +++ +P G I Sbjct: 137 IEDSLALYKRLVDAGAAMLTIHGRTRFQNKVDTGTANWDYIRQVVDLVGDRVPVIANGNI 196 Query: 84 KSLEDAAKILS-FGADKISINSPALADPTLITR 115 +L++ K G D + + L P L T Sbjct: 197 CNLDEVRKCFEVTGVDGVMSSEGILEYPPLFTE 229 >UniRef50_C1EEA5 Dihydrouridine synthase n=1 Tax=Micromonas sp. RCC299 RepID=C1EEA5_9CHLO Length = 465 Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 51/173 (29%), Gaps = 5/173 (2%) Query: 86 LEDAAKILSF--GADKISINSPALADPTLITRLAD-RFGVQCIVVGIDTWYDAETGKYHV 142 LE A+ L+ GA ++ +N A+ V + Sbjct: 146 LERCARFLAHQGGAPRVDLNCGCPANVVTGKGAGSSLLRDPRDVEAMTRAVARGVAGTGC 205 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 S + + Q GA + L+ + +G E + ++ Sbjct: 206 AVTVKLRSGFDDRGL-LRENLLAAQAGGASFVTLHPRTRAQGYSGHAAWEDIGFAVDLLS 264 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 VP++ +G + + RD G + + + +A L+ + Sbjct: 265 VPVVGNGDVTSAALASKMLRDTGCAGVMIGRGAVQDPLVFRRCRAALSDENFR 317 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 4/101 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + G + GA + + T + + +++ +P Sbjct: 209 VKLRSGFDDR--GLLRENLLAAQAGGASFVTLHPRTRAQGYSGHAAWEDIGFAVDLLSVP 266 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 G + S A+K+L G + I A+ DP + R Sbjct: 267 VVGNGDVTSAALASKMLRDTGCAGVMIGRGAVQDPLVFRRC 307 >UniRef50_Q21L63 Dihydrouridine synthase, DuS n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21L63_SACD2 Length = 318 Score = 93.8 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 48/162 (29%), Gaps = 2/162 (1%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GA I +N A + + V + Sbjct: 91 ELGAVAIDLNFGCPAKTVNRHKGGACLLDETDTVFDIVNAVRKATPASTPVTAKIRLGYL 150 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGT 212 + L + ++ GA E+ ++ ++ + +R+ +P++A+G + Sbjct: 151 -NRDSYLRNAKAIEAAGANELCVHARSKTDGYQPPAYWHYIGDIRDNLSIPVVANGEIWS 209 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +E F + + + E+K Y+A + Sbjct: 210 LEDFKRCAEQSKCSDFMLGRGLLAKPDLALEIKQYMAGEAFN 251 Score = 79.9 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 41/163 (25%), Gaps = 17/163 (10%) Query: 19 KGVQF--RNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDI 75 K + + AK GA+EL + + + ++ + + + I Sbjct: 144 KIRLGYLNRDSYLRN----AKAIEAAGANELCVHARSKTDGYQPPAYWHYIGDIRDNLSI 199 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRF---------GVQCI 125 P G I SLED + + LA P L + + Sbjct: 200 PVVANGEIWSLEDFKRCAEQSKCSDFMLGRGLLAKPDLALEIKQYMAGEAFNPLSWDEVC 259 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + + Q + + + + Sbjct: 260 AHVRTLFERNCQSYPPKYLGNRVKQWLFYLQRQYSEAAELFEA 302 >UniRef50_A8TGW8 Histidine biosynthesis protein n=1 Tax=Methanococcus voltae A3 RepID=A8TGW8_METVO Length = 181 Score = 93.4 bits (231), Expect = 6e-18, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 5/142 (3%) Query: 80 AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 GGIK+ E+A+KI G +KIS+NS P+L+T L+ +G Q IV +D + Sbjct: 12 GGGIKTFEEASKIFELGFEKISLNSVLFEKPSLLTELSQSYGSQSIVASVDVKKNLFGKL 71 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 N + ++ LD+V+ ++ GAGE+++N ++ +G GY+L + ++ Sbjct: 72 KVYNGSKNNSINDKI-----LDYVKNLENLGAGELLINSVDLEGTYKGYNLSLINELSNA 126 Query: 200 CHVPLIASGGAGTMEHFLEAFR 221 +PLIA GGA + + F +A + Sbjct: 127 LTIPLIALGGASSTKDFKDALQ 148 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 3/92 (3%) Query: 6 IIPCLDVRDGQVVKGV--QFRNHEIIGD-IVPLAKRYAEEGADELVFYDITASSDGRVVD 62 I+ +DV+ K + I D I+ K GA EL+ + + + Sbjct: 57 IVASVDVKKNLFGKLKVYNGSKNNSINDKILDYVKNLENLGAGELLINSVDLEGTYKGYN 116 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 S ++ ++ + IP GG S +D L Sbjct: 117 LSLINELSNALTIPLIALGGASSTKDFKDALQ 148 >UniRef50_B7XJM7 tRNA-dihydrouridine synthase 1 n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XJM7_ENTBH Length = 309 Score = 93.4 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 48/155 (30%), Gaps = 7/155 (4%) Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + D I IN + +G + T + + R Sbjct: 72 IQQYCDAIDINLGCPQNIAK----KGNYGSYLMDDFEKVKNIISTLAEQLTVPIFCKIRV 127 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPLIASGG 209 + +T+ + + ++K G + ++ ++ + ++ V+ +P++++GG Sbjct: 128 FESIEKTITYAKMIEKSGCSLLAVHGRTREQKGQNTGYVSFDHIRAVKNALSIPVVSNGG 187 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 T A DG + ++ Sbjct: 188 VLTHRDIKNAVEITGCDGIMIGEPILFIPSIFVDI 222 Score = 80.3 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 4/99 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 + R E I + AK + G L + T G+ V + V + IP Sbjct: 124 KIRVFESIEKTITYAKMIEKSGCSLLAVHGRTREQKGQNTGYVSFDHIRAVKNALSIPVV 183 Query: 79 VAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 GG+ + D + G D I I P L P++ + Sbjct: 184 SNGGVLTHRDIKNAVEITGCDGIMIGEPILFIPSIFVDI 222 >UniRef50_Q72EB7 Dihydrouridine synthase family protein n=4 Tax=Desulfovibrio RepID=Q72EB7_DESVH Length = 332 Score = 93.4 bits (231), Expect = 7e-18, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 41/158 (25%), Gaps = 3/158 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A ++ + G + IN I R + ++ Sbjct: 82 AEAARRVEAEGFFGVDINMGC--SVAAIVRRGCGADLLRDEERAVRMVESVRRAVDCPVL 139 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL-EQLKKVREVCHVPL 204 + + + + GA +V + R L ++ V+E +P+ Sbjct: 140 VKFRTGWSPDPQGAVALARRFEDAGADALVFHPRVAPDRRTRPPLRHHIRLVKEAVAIPV 199 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +G T DG + + Sbjct: 200 LGNGEVFTPGDAASMLETTGCDGISLGRIALGRPWVFA 237 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 57/181 (31%), Gaps = 10/181 (5%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVID 74 +VK + + G V LA+R+ + GAD LVF+ A R + + V E + Sbjct: 138 VLVKFRTGWSPDPQG-AVALARRFEDAGADALVFHPRVAPDRRTRPPLRHHIRLVKEAVA 196 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G + + DAA +L G D IS+ AL P + Sbjct: 197 IPVLGNGEVFTPGDAASMLETTGCDGISLGRIALGRPWVFAAWTGLVDDNPASNPDLWRD 256 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL 193 + R + ++ + + G D L Sbjct: 257 IPLALLDALE-------RRHADRKYAARLFKKFLLYFIANFTYGNSLRGPMLKGDDPADL 309 Query: 194 K 194 + Sbjct: 310 R 310 >UniRef50_A0B616 Histidine biosynthesis n=1 Tax=Methanosaeta thermophila PT RepID=A0B616_METTP Length = 227 Score = 93.0 bits (230), Expect = 8e-18, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 80/253 (31%), Gaps = 38/253 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG-----------DIVPLAKRYAEEGADELVFYDI 52 R I +D+ + +VV V+ D + + + A E+ D+ Sbjct: 1 MRCIFVMDIYNSKVVHAVRGERSRYRSINTFSRVVSTPDPIEIIEILA---PKEVYVADL 57 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 G + + R++ GI +L D + + P L Sbjct: 58 NR-LSGSGDNLKTIERISSKAIT--MADIGISTLSDLSLLPE------------PTTPVL 102 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 T A + D + + + + L+ ++E+ Sbjct: 103 GTETASLDLISDASDLRDIVVSIDMKHR--------KVISHSGLLDPLELIKEMNDLDLL 154 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 I+L +++ G G D+E L P++ GG + A + V G L A+ Sbjct: 155 GIILLELDRVGTSAGVDIEFLSSAVASSDHPVLVGGGVRGLSDVH-ALEEIGVHGVLVAT 213 Query: 233 VFHKQIINIGELK 245 H + + I ++ Sbjct: 214 AVHSRAMPIEMIQ 226 >UniRef50_Q1H0R8 Histidine biosynthesis n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H0R8_METFK Length = 234 Score = 93.0 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 86/259 (33%), Gaps = 37/259 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGA-------DELVFYDIT 53 ++IP +D+ +G VV Q + ++ ++ GA L D+ Sbjct: 1 MQVIPVIDLMNGAVVHARQGNRAHYQPIVSNLCNGSEAQEIVGALLGLYPFPALYIADLD 60 Query: 54 ASSDGRVVDKSWVSR-VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + R ++ + +++ + V GI S+ + + + + ++ Sbjct: 61 -AIQCRNDHRTLIHTLLSKHPTLEIWVDAGINSVAKVQRW-QHPRLRPVLGTESIPSIAT 118 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 LA + I+ T + +QE + Sbjct: 119 WHLLAGACEGRHILSLD---------------------FTTAGYQGPSELLQEARHWP-Q 156 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +++ + G G D+++L R L A+GG + R + GAL A Sbjct: 157 HVIIMSLPHVGSHAGPDMDKLTHFRALSPKHHLYAAGGIRDASDL-QLLRKRGIKGALVA 215 Query: 232 SVFHKQIINIGELKAYLAT 250 S H + L++ LA+ Sbjct: 216 SALHNGNLEKSMLQSILAS 234 >UniRef50_UPI0001792282 PREDICTED: similar to tRNA-dihydrouridine synthase n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792282 Length = 578 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 6/219 (2%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKIL 93 + E GAD ++ G + + R V G L +A++L Sbjct: 248 RICKEFGADITCSEMVLSSSLLQGHNQEWALTKRHETEDIFGIQVCGNNPYMLAKSAQVL 307 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 D ++ I + G+ ++ + V S Sbjct: 308 QENVDMDFLDLNLGCPLDQIYKQGAGSGLLLRSKKLEVCLKSMRTVLDVPLTVKTRSGVN 367 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIASGGAG 211 Q D + + G I ++ ++D D + + + V + +SG Sbjct: 368 KDQNVAHDLIPMFKDSGVSLITVHGRSRDQRYTKMADWNYVNECAKLASPVQVFSSGDIM 427 Query: 212 TMEHFLEA-FRDADVDGALAASVFHKQIINIGELKAYLA 249 + E ++++ + D+ GA+ + ELK Sbjct: 428 SYEDYVDSKLQFPDITGAMIGRGALIKPWIFKELKENCH 466 Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 8/171 (4%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVS 67 LDV VK N + L + + G + + + ++ D ++V+ Sbjct: 353 VLDVP--LTVKTRSGVN-KDQNVAHDLIPMFKDSGVSLITVHGRSRDQRYTKMADWNYVN 409 Query: 68 RVAE-VIDIPFCVAGGIKSLEDAA--KILSFGADKISINSPALADPTLITRLADRFGVQC 124 A+ + +G I S ED K+ I AL P + L + Sbjct: 410 ECAKLASPVQVFSSGDIMSYEDYVDSKLQFPDITGAMIGRGALIKPWIFKELKENC-HWD 468 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 I + KY + + D T+ L+W+ + I+ Sbjct: 469 ISSNERLEILKKYVKYGLEHWGSDTRGVETTRKFLLEWLSFCYRYIPVGIL 519 >UniRef50_A2DHB4 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DHB4_TRIVA Length = 312 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 54/162 (33%), Gaps = 10/162 (6%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRF-----GVQCIVVGIDTWYDAET 137 + +D D I +N + ++ I + Sbjct: 85 VSCAKDVENF----CDMIELNCGCTHCFASRSGCGFFLIDTQKHRDSALILIQNLIKSIN 140 Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKV 196 + + + + T+ + Q++++ G I ++ Q + G D + +K V Sbjct: 141 KPVSIKIRLISDDNSVPSLERTVKFAQDLERVGVSLITVHARTQQADKKGDVDYDAIKAV 200 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + VP+IA+GG ++E E + +A F K Sbjct: 201 VQAVSVPVIANGGISSLEQAQEIIQRTGAYAVMAGQCFFKNP 242 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 15/165 (9%) Query: 18 VKGVQFRNHEII-GDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDI 75 ++ + N V A+ G + + T + VD + V + + + Sbjct: 147 IRLISDDNSVPSLERTVKFAQDLERVGVSLITVHARTQQADKKGDVDYDAIKAVVQAVSV 206 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTL------ITRLADRFGVQCIVVG 128 P GGI SLE A +I+ GA + +PT ++ + Sbjct: 207 PVIANGGISSLEQAQEIIQRTGAYAVMAGQCFFKNPTCLTTNKNPKEISLEYLNLAKENN 266 Query: 129 IDTWYDAETGKYHVNQYTGDES------RTRVTQWETLDWVQEVQ 167 D + + + T + ++WV+ ++ Sbjct: 267 EDLQRSRKHVYAFLGDVLRQHPEYGPVVMQQRTYVDLIEWVKSIE 311 >UniRef50_Q9BTJ3 DUS1L protein (Fragment) n=7 Tax=Euteleostomi RepID=Q9BTJ3_HUMAN Length = 299 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHV 202 + R +T+ + Q ++K G + ++ ++ E +K VR+ + Sbjct: 13 VTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKAVRKAVAI 72 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 P+ A+G ++ RD V G ++A Sbjct: 73 PVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFE 112 Score = 91.5 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 44/177 (24%), Gaps = 24/177 (13%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---R 59 R+ P +D V A+ + G L + T G Sbjct: 16 KIRVFPEID-------------------KTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSG 56 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLAD 118 + V + + IP G I+ L+D + L G + L +P L + Sbjct: 57 AASWEHIKAVRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFEGRSP 116 Query: 119 RFGVQCIVVGIDTWYDAET-GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + +V Q + + G + Sbjct: 117 AVWELAEEYLDIVREHPCPLSYVRAHLFKLWHHTLQVHQELREELAKVKTLEGIAAV 173 >UniRef50_D2VPP8 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VPP8_NAEGR Length = 427 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 52/162 (32%), Gaps = 9/162 (5%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK---YHVNQY 145 A ++ + D I +N P ++ V D ++A Sbjct: 196 ACQLAAPYCDGIDLNCGCPQ-PYVMKESLGAALVTKPQKIFDMVHEANNKFISGMSRPIG 254 Query: 146 TGDESRTRVTQWE---TLDWVQEVQKRGAGEIVLNMMNQDGV--RNGYDLEQLKKVREVC 200 E T++ ++++ GA + ++ + + K ++++ Sbjct: 255 VKIRLHPEDDTLEFRKTIELARQIEMAGASWVTVHGRTHKQRTKNTKVNPDGPKTIKQIL 314 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +VP++ +G T+ ++ DG ++A Sbjct: 315 NVPVMHNGDIFTLGDSDRFAKETGCDGVMSARGLLSNPALFS 356 Score = 79.5 bits (195), Expect = 9e-14, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 54/172 (31%), Gaps = 14/172 (8%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEV 72 G ++ + + LA++ GA + + T + V+ + ++ Sbjct: 254 GVKIRLHPEDDTLEFRKTIELARQIEMAGASWVTVHGRTHKQRTKNTKVNPDGPKTIKQI 313 Query: 73 IDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLI-------TRLADRFGVQC 124 +++P G I +L D+ + G D + L++P L R+ Sbjct: 314 LNVPVMHNGDIFTLGDSDRFAKETGCDGVMSARGLLSNPALFSGYDYVPFECIQRYLQIA 373 Query: 125 I----VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 I V + Y +Q+ + + ++RG Sbjct: 374 IQIGGVPFHILQHHIMFMLYSHHQFLSADVIEFSECTSVASILDFFEERGLQ 425 >UniRef50_C7LQM9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibrionales RepID=C7LQM9_DESBD Length = 324 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 55/207 (26%), Gaps = 10/207 (4%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAKILSFGADKISINSPALADPT 111 + + + + G ++ ++ G +N Sbjct: 47 GLIYDSPGTNELLQTCDQDSPLVVQLFGSEEPFLVQSIERLRKAGFRYFDLNCGCPVRKV 106 Query: 112 LIT---RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + T + + + AE G G V L ++++ Sbjct: 107 IKTGSGAALLKEPENLLKIAKSMIDAAEPGCMGFKIRLGWYVGQPV----YLQVATKLEE 162 Query: 169 RGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 GAG + ++ G D LK ++E +P+IASG E ++ VD Sbjct: 163 LGAGWVTMHPRFGAQGFTGHADWSHLKTLKERVTLPVIASGDLFHAEDAIKCIEQTSVDS 222 Query: 228 ALAASVFHKQIINIGELKAYLATQGVE 254 + A + Sbjct: 223 IMFARGALNDPSIFTRYLQLRRHEEPP 249 Score = 78.4 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 51/162 (31%), Gaps = 11/162 (6%) Query: 19 KGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDI 75 K +G V +A + E GA + + + D S + + E + + Sbjct: 141 KIRLGW---YVGQPVYLQVATKLEELGAGWVTMHPRFGAQGFTGHADWSHLKTLKERVTL 197 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD--RFGVQCIVVGIDTW 132 P +G + EDA K + D I AL DP++ TR R Sbjct: 198 PVIASGDLFHAEDAIKCIEQTSVDSIMFARGALNDPSIFTRYLQLRRHEEPPAKSWQQME 257 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 Q+ D + +++ + GA + Sbjct: 258 DMVRRLSELYPQHGMDRLGLLKMRTLVPRFLKGLP--GARAL 297 >UniRef50_A6W1E8 Dihydrouridine synthase DuS n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W1E8_MARMS Length = 335 Score = 92.6 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 42/168 (25%), Gaps = 2/168 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A GA I +N A + +T + Sbjct: 96 AESALNATKAGAKHIDVNFGCPAKRVNGHGGGSVLLQTPDALYDIMSAIRDTLPSDIPVS 155 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 D V ++ G G + ++ + E++ +++ + + Sbjct: 156 AKIRLGFEDEAL-LFDNVAAIEAAGVGTLTIHGRTKKDGYKPPARWEKIGEIQAKTKMTV 214 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +A+G + L + +++ L Q Sbjct: 215 VANGDITDTKSLLRCQSITGCQHFMIGRGSLNNPFVFQQIRKELNGQE 262 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 10/81 (12%), Positives = 21/81 (25%), Gaps = 2/81 (2%) Query: 38 RYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-F 95 G L + T + + + G I + + S Sbjct: 174 AIEAAGVGTLTIHGRTKKDGYKPPARWEKIGEIQAKTKMTVVANGDITDTKSLLRCQSIT 233 Query: 96 GADKISINSPALADPTLITRL 116 G I +L +P + ++ Sbjct: 234 GCQHFMIGRGSLNNPFVFQQI 254 >UniRef50_B0S913 tRNA-dihydrouridine synthase n=7 Tax=Leptospira RepID=B0S913_LEPBA Length = 337 Score = 92.2 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 23/189 (12%), Positives = 53/189 (28%), Gaps = 5/189 (2%) Query: 58 GRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDA-AKILSFGADKISINSPALADPTLITR 115 G V I F + G + ++ +A D I +N Sbjct: 51 GNAKSLDMFRFVEMERPIVFQIFGSDLDTVVNASEIAAEQKPDIIDLNMGCSVSKVSHNG 110 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + + + ++ L+ ++ ++ G I Sbjct: 111 SGAGLL--KNIRLAGKMIEGIRNRTNLPVTAKIRLGWDANSLNYLETLKVLEDSGVSAIS 168 Query: 176 LNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 ++ + G D + +++ +VP+ +G + + LE + VD L Sbjct: 169 VHGRTKAMAYTGIADWNAIGEIKSRANVPIYGNGDVQSYKEALEKKKTYGVDLVLIGRKA 228 Query: 235 HKQIINIGE 243 G+ Sbjct: 229 IGNPWVFGK 237 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 51/152 (33%), Gaps = 3/152 (1%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + + + K + G + + T + + D + + + ++P Sbjct: 140 KIRLGWDANSL-NYLETLKVLEDSGVSAISVHGRTKAMAYTGIADWNAIGEIKSRANVPI 198 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G ++S ++A + G D + I A+ +P + + +F + + + Sbjct: 199 YGNGDVQSYKEALEKKKTYGVDLVLIGRKAIGNPWVFGKTPKQFFPWYQIKDVILEHLDL 258 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 ++ R + ++ + + Sbjct: 259 MLNFYPTSDDYALILFRKHFIKYIENIGFPED 290 >UniRef50_C8X244 Dihydrouridine synthase DuS n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X244_DESRD Length = 328 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 49/213 (23%), Gaps = 13/213 (6%) Query: 38 RYAEEGA-----DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAK 91 E GA + + + ++ + + G + Sbjct: 35 LCRENGARVAHTEMISVKGL---IYNSQGTWDLLATAPADTPLVVQLFGADPDCFAQPVR 91 Query: 92 IL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 L G I +N+ + T + V Sbjct: 92 WLTERGFHWIDLNAGCPVRKVIKTGAGAALMEDP--QRLVRIMQTIGRAAPVQAGVKLRL 149 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGG 209 + L + + G I L+ G L ++ E VP++ASG Sbjct: 150 PADGSTDGLLRLRDTLARAGVSWITLHPRTARQGYGGLAQWSALSRMAESSPVPIVASGD 209 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + F VDG + A Sbjct: 210 LWNAQAARRCFEQTGVDGIMFARGALHNPRIFK 242 >UniRef50_Q9VJ06 CG10495 n=12 Tax=Drosophila RepID=Q9VJ06_DROME Length = 396 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 42/149 (28%), Gaps = 3/149 (2%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES-RTRVT 155 D I +N + Q +V T + + Sbjct: 103 VDGIDLNCGCPQSWAMAKGYGCGMLRQPELVHQVVQEVRRTLPGDFSVSVKMRLLGGEES 162 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREVCHVPLIASGGAGTM 213 T+D ++++ G + L+ + D+ + +VR+ +PLI +G + Sbjct: 163 LQRTIDLARQLESAGVTFLTLHGRTPAQKHSKDTLDIPAMSQVRQSLQIPLIVNGNVESY 222 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIG 242 + G +AA Sbjct: 223 RDACDMHEQTGAAGVMAARGLLANPALFN 251 Score = 80.3 bits (197), Expect = 5e-14, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 51/163 (31%), Gaps = 4/163 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW--VSRVAEVIDI 75 VK E + + LA++ G L + T + +S+V + + I Sbjct: 152 VKMRLLGGEESLQRTIDLARQLESAGVTFLTLHGRTPAQKHSKDTLDIPAMSQVRQSLQI 211 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P V G ++S DA + GA + LA+P L + Sbjct: 212 PLIVNGNVESYRDACDMHEQTGAAGVMAARGLLANPALFNSNYPDGKTTPLSCVQQWLDI 271 Query: 135 AETGKYHVNQYTGDESRT-RVTQWETLDWVQEVQKRGAGEIVL 176 A ++ T + D + G+ E V+ Sbjct: 272 ASAAGDNLLFQCFHHHLTFMYSAQMKRDLRVQFNSLGSKEQVV 314 >UniRef50_B8FH09 Dihydrouridine synthase DuS n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FH09_DESAA Length = 328 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 46/163 (28%), Gaps = 11/163 (6%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI----VVGIDTWYDAETGKYH 141 + A +I + G + IN R RF A + Sbjct: 82 AKAAERIEAEGFFGVDINCGC------SARAICRFDSGAALLAKPDLAAQVVRAVRKAVN 135 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVC 200 + + + + + GA ++ + D E + V++ Sbjct: 136 IPVIVKFRTGWKDDPAHAVSMARLFCDEGADALIFHPRVAPDLRTRPPKWEYIGLVKDAV 195 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 VP+ +G +++ + + DG + Q + + Sbjct: 196 KVPVFGNGNVISLDDAAKMLSMSGCDGVALGRIALAQPWIMAQ 238 Score = 88.8 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 10/118 (8%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSW 65 IP + VK V +A+ + +EGAD L+F+ A R + Sbjct: 136 IPVI-------VKFRTGWKD-DPAHAVSMARLFCDEGADALIFHPRVAPDLRTRPPKWEY 187 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGV 122 + V + + +P G + SL+DAAK+LS G D +++ ALA P ++ + + Sbjct: 188 IGLVKDAVKVPVFGNGNVISLDDAAKMLSMSGCDGVALGRIALAQPWIMAQWSQGMKP 245 >UniRef50_A8J281 Predicted protein (Fragment) n=3 Tax=cellular organisms RepID=A8J281_CHLRE Length = 241 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 49/163 (30%), Gaps = 6/163 (3%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRF----GVQCIVVGIDTWYDAETGKYHVNQ 144 AA+ L+ A +I +N A+ +V + H Sbjct: 76 AAQYLAERAPRIDLNCGCPANTVTGNGAGSSLLRTPQRIHDIVSAMVAGVRASAAPHTPV 135 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVP 203 + T D + Q+ GA I L+ + +G D + ++ VP Sbjct: 136 SVKLRAGFDDTSL-FEDNLLAAQEAGASFITLHPRTKRQCYDGAADWSLTARAVQLLRVP 194 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +I +G +E R G + + + ++ Sbjct: 195 VIGNGDVVCVERAHALLRQTGCHGVMVGRGAVQDPLLFHRIRH 237 Score = 76.4 bits (187), Expect = 8e-13, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 4/105 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + E GA + + T D S +R +++ +P Sbjct: 137 VKLRAGFDDTSLFE--DNLLAAQEAGASFITLHPRTKRQCYDGAADWSLTARAVQLLRVP 194 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRF 120 G + +E A +L G + + A+ DP L R+ F Sbjct: 195 VIGNGDVVCVERAHALLRQTGCHGVMVGRGAVQDPLLFHRIRHSF 239 >UniRef50_Q87N01 tRNA-dihydrouridine synthase C n=54 Tax=Gammaproteobacteria RepID=DUSC_VIBPA Length = 322 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 3/155 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+A + GA I +N A ++ ++ + ++ Sbjct: 78 AENAIRAAELGARGIDLNFGCPAKMVNKSKGGAALLQHPELIHSVVKACRDAVPANIPVS 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR--NGYDLEQLKKVREVCHVP 203 + + V +Q GA E+ ++ + G + E + K+RE +P Sbjct: 138 AKIRLGWE-NPEDCFEIVDAIQSAGANELTVHARTKQGGYKASEIKWEYINKIRERFSIP 196 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 LIA+G E VD + Sbjct: 197 LIANGEIWNFEDGQRCIETTGVDSLMVCRGAFNIP 231 Score = 77.6 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 59/173 (34%), Gaps = 12/173 (6%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD--KSWVSRVAEVIDIP 76 K E D + GA+EL + T + + +++++ E IP Sbjct: 139 KIRLGW--ENPEDCFEIVDAIQSAGANELTVHARTKQGGYKASEIKWEYINKIRERFSIP 196 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTL-------ITRLADRFGVQCIVVG 128 G I + ED + + G D + + A P L T + V ++ Sbjct: 197 LIANGEIWNFEDGQRCIETTGVDSLMVCRGAFNIPNLGNMVKHNHTPMVWSDVVDLLIYY 256 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + G Y+ N+ + R + E + +E++ ++ + + Sbjct: 257 SKFEMKGDKGLYYPNRVKQWFAYLRQSYPEANELFREIRTFNKAAPIVEHIQR 309 >UniRef50_B8DIS9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibrionales RepID=B8DIS9_DESVM Length = 383 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 43/158 (27%), Gaps = 3/158 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A ++ + G + +N + I + + A + + Sbjct: 119 AEGARRVQAEGFFGVDLNMGC--SVSAIIKRGCGADLLRDPERAVRMVAAVRRAVDIPVF 176 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPL 204 + +D + + GA +V + D + V+ +P+ Sbjct: 177 VKFRTGWSPDPQPAVDLARRFEDAGADCLVFHPRVAPDRRTQPPRRAHIGLVKAAVSIPV 236 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +G T E D DG + + Sbjct: 237 MGNGDVFTPEDCANLLDDTGCDGVSLGRIAVARPWVFA 274 Score = 86.8 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 5/110 (4%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVS 67 +D+ VK V LA+R+ + GAD LVF+ A + ++ + Sbjct: 170 AVDIP--VFVKFRTGW-SPDPQPAVDLARRFEDAGADCLVFHPRVAPDRRTQPPRRAHIG 226 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 V + IP G + + ED A +L G D +S+ A+A P + Sbjct: 227 LVKAAVSIPVMGNGDVFTPEDCANLLDDTGCDGVSLGRIAVARPWVFAAW 276 >UniRef50_A7IL67 Histidine biosynthesis protein n=2 Tax=Alphaproteobacteria RepID=A7IL67_XANP2 Length = 235 Score = 91.8 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 66/261 (25%), Gaps = 42/261 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVP-LAKRYAEEGADELVFYDIT 53 ++IP +D++ G VV + + +A A L D+ Sbjct: 1 MQLIPVVDLKGGYVVHARRGERDSYRPIHTPLAATSAPLDVVAGLLALAPFRTLYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + G+ + + + + V G + + G I + L D Sbjct: 61 -AIAGKGSHGAVIDGLRAAFPRLDLWVDAGEARADQVHARAAQGRGFCVIGTETLPDVAA 119 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + A ++ + Sbjct: 120 AKDVL----------------AAGDVILSLDHDAAGPRGPVSVHEDP--------ALWPE 155 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHV-----PLIASGGAGTMEHFLEAFRDADVDG 227 +++ + + G G DL L++ L A+GG E G Sbjct: 156 RVIVMTLARVGSGEGPDLAALERTAARADGIGRHPSLYAAGGVRGPEDLDR-LAAMGTAG 214 Query: 228 ALAASVFHKQIINIGELKAYL 248 L AS H I + + Sbjct: 215 VLVASALHDGRIGPDTARRWA 235 >UniRef50_B1C9Q3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9Q3_9FIRM Length = 329 Score = 91.5 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 7/162 (4%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT-WYDAETGKYHVNQYTGDESRT 152 D I IN + ++ + ++ +D K ++ + R Sbjct: 98 DTAFDFIDINMGCP-----MKKIVNNGDGSALLKDLDKANKVVREVKSASSKPVSVKVRL 152 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 + D ++ ++ GA I ++ ++ V G D + +KK +E VPLIA+G Sbjct: 153 GFNENIIEDIIKAIEDGGADMITVHGRTREQVFTGEVDYDGIKKAKETASVPLIANGDLD 212 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 E DG + + + ++ + V Sbjct: 213 NYLKAKEKMDYTGADGVMIGRGANYDPFIFSQFNECISGKKV 254 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK N II D + K + GAD + + T VD + + E +P Sbjct: 148 VKVRLGFNENIIED---IIKAIEDGGADMITVHGRTREQVFTGEVDYDGIKKAKETASVP 204 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 G + + A + + GAD + I A DP + ++ Sbjct: 205 LIANGDLDNYLKAKEKMDYTGADGVMIGRGANYDPFIFSQ 244 >UniRef50_C6WWE3 Histidine biosynthesis protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWE3_METML Length = 254 Score = 91.1 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 37/253 (14%), Positives = 78/253 (30%), Gaps = 31/253 (12%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDI-VPLAKRYAEEGADELVFYDIT 53 +IIP +D+ +G VV + H + +A A +L D+ Sbjct: 1 MQIIPVIDLLNGIVVHAKKGERHRYQAITSALTPSSEPLAIVAALLALHPFQQLYIADLN 60 Query: 54 ASSD-------GRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSP 105 A + + ++ +A+ + V GI +L + Sbjct: 61 AIQKLGNTQDCTQSNNFDVIASIAQHYPNLTLWVDAGISNLTELDLWSQLN--------- 111 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 + P L ++ + + Y A + T ++ + E Sbjct: 112 LSSQPDLSSQAGVKLILGSENFVSMEQYLAIYHVISEQTILSLDF--MPTGYQGPQALLE 169 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDAD 224 +++ + G G +L+ L + + L A+GG + + Sbjct: 170 STAYWPQAVIIMSLAHVGANQGVNLQLLTQTQAKAGDFNLYAAGGVRDIADL-NTLKSLG 228 Query: 225 VDGALAASVFHKQ 237 + GAL A+ H + Sbjct: 229 IHGALIATAIHSK 241 >UniRef50_B9PN28 tRNA-dihydrouridine synthase, putative n=3 Tax=Toxoplasma gondii RepID=B9PN28_TOXGO Length = 1220 Score = 91.1 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 62/222 (27%), Gaps = 15/222 (6%) Query: 37 KRYAEEGADELVFYDITASSD---GRVVDKSWVSRVAEVIDIPFCVAGGIKSLE------ 87 + E GA E+ ++ + G+ + S + R +AGG + E Sbjct: 836 RLCVELGA-EVTVSEMAVAKSIVDGKQSELSLLKRHKSETFFGVQIAGG--TPEVLNACT 892 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 D D I +N+ A + T V Sbjct: 893 DILASEDVSCDFIDLNAACPLVQLHRRFKAGACMLDHPKRLESLVESMTTRHPEVPVTVK 952 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH--VPL 204 + + + +++ + GA ++++ D + + RE PL Sbjct: 953 LRTANQGKKQVLHSFIRRLGDAGAAALIVHGRTAQQRYTKAADWSYVAQCREALDSSTPL 1012 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 I G + F DG + A + E+ Sbjct: 1013 IGCGDIFSSPEFEFRLASGASDGLMIARAALVKPWVFTEISE 1054 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 58/153 (37%), Gaps = 12/153 (7%) Query: 18 VKGV---QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI 73 VK Q + + +R + GA L+ + TA + D S+V++ E + Sbjct: 951 VKLRTANQGKKQVLHS----FIRRLGDAGAAALIVHGRTAQQRYTKAADWSYVAQCREAL 1006 Query: 74 D--IPFCVAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADRFGVQCIVVGID 130 D P G I S + L+ GA D + I AL P + T +++R V I Sbjct: 1007 DSSTPLIGCGDIFSSPEFEFRLASGASDGLMIARAALVKPWVFTEISER-KVWDISASER 1065 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 ++ + + D T+ L+ + Sbjct: 1066 LDLLKRFVRFGLEHWGSDSRGVATTRRFLLELL 1098 >UniRef50_C1DY86 Dihydrouridine synthase-like family protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DY86_9CHLO Length = 495 Score = 91.1 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 12/157 (7%), Positives = 43/157 (27%), Gaps = 3/157 (1%) Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 I +N T L + ++ + ++ Sbjct: 194 FIDLNCGCPIHETWKRGLGAALLKKP--KKLERLVRGIADGTRLPLTVKIRLGAGGSEAP 251 Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + V+ GA ++++ ++ + + + +++ +P++ +G T Sbjct: 252 ARQLAEAVENAGAAAVIIHGRTKEQRYTRAANWDLIGEIQRERGIPVVGNGDILTHYEHR 311 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + + A+ + E+ + Sbjct: 312 DRLARSGAHAAMTGRGALIKPWIFKEVAEGVEWAPTP 348 Score = 82.2 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 5/108 (4%) Query: 18 VKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDI 75 VK LA+ GA ++ + T R + + + I Sbjct: 239 VKIRLGAGG--SEAPARQLAEAVENAGAAAVIIHGRTKEQRYTRAANWDLIGEIQRERGI 296 Query: 76 PFCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 P G I + E ++ GA AL P + +A+ Sbjct: 297 PVVGNGDILTHYEHRDRLARSGAHAAMTGRGALIKPWIFKEVAEGVEW 344 >UniRef50_A2EF32 Dihydrouridine synthase, putative n=1 Tax=Trichomonas vaginalis RepID=A2EF32_TRIVA Length = 318 Score = 90.7 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 62/197 (31%), Gaps = 24/197 (12%) Query: 50 YDITASSDGRVVDKSWV----SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 + + A G D+ + +A+ D V G + A +G + Sbjct: 73 HPLIAQIAGSNEDQDLIVAAAKDLAKYADG-VDVNLG--CTQKIASRSEYGYFMVDNCQK 129 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 L RL + V++ T+D+ ++ Sbjct: 130 REKTLELFRRLCKEVNCPICA----------------KIRIFIDDSGEVSEKITIDFAKK 173 Query: 166 VQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 +++ G + ++ + + E +K + + ++P++A+GG T+E + + Sbjct: 174 LEEAGVSLLQVHGRAEHRNKQADVYNEIIKHIVQAVNIPVVANGGINTVEDAHKFMEETG 233 Query: 225 VDGALAASVFHKQIINI 241 G A K Sbjct: 234 AAGVSVAQALLKDPTAF 250 Score = 78.0 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 6/140 (4%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDK--SWVSRVAEVIDIPFCVAGGIKSLEDA 89 + AK+ E G L + A + D + + + ++IP GGI ++EDA Sbjct: 167 TIDFAKKLEEAGVSLLQVHGR-AEHRNKQADVYNEIIKHIVQAVNIPVVANGGINTVEDA 225 Query: 90 AKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 K + GA +S+ L DPT + + ++ + + ++ Sbjct: 226 HKFMEETGAAGVSVAQALLKDPTAFDPTGKKPRKDYALEYLNLSKEKGVRFFGPKKHIFI 285 Query: 149 ESRTRVTQWETLDWVQEVQK 168 E + +++++ Sbjct: 286 FY--EKEIRENKELAKQIEQ 303 >UniRef50_B0ESC7 tRNA-dihydrouridine synthase, putative n=2 Tax=Entamoeba RepID=B0ESC7_ENTDI Length = 515 Score = 90.7 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 56/193 (29%), Gaps = 7/193 (3%) Query: 57 DGRVVDKSWVSRVAEV--IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 +G+ + + V R I CV + + + + S D +N D Sbjct: 209 EGKTSEWALVKRDPSEDIFGIQLCVGNSLLAAKACQVLNSVDCDFYELNCACPIDYVYKK 268 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + + I++ A + + + + GA + Sbjct: 269 GMGAQLIERP--KRIESLLHAMRSVTERPVAIKVRTGKSSNTIQDV-LLPNCANYGAAMV 325 Query: 175 VLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++ +D D + +K+ + P+I G + + +A V Sbjct: 326 SIHGRTRDQRYTKSADWDFIKQATTITQCPVIGVGDIYGYKDYQKALE-CGVATVAIGRG 384 Query: 234 FHKQIINIGELKA 246 + E+K Sbjct: 385 ALIKPWIYTEIKE 397 Score = 76.8 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 3/108 (2%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVID 74 +K ++ I D++ A GA + + T + D ++ + + Sbjct: 296 VAIKVRTGKSSNTIQDVL--LPNCANYGAAMVSIHGRTRDQRYTKSADWDFIKQATTITQ 353 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 P G I +D K L G ++I AL P + T + ++ Sbjct: 354 CPVIGVGDIYGYKDYQKALECGVATVAIGRGALIKPWIYTEIKEKRDW 401 >UniRef50_A2FU21 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2FU21_TRIVA Length = 322 Score = 90.3 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 57/171 (33%), Gaps = 10/171 (5%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ-----CIVVGIDTWYDAET 137 I +D + A I IN + ++ + + Sbjct: 86 IACAKDLQQF----AVGIDINCGCTQHIARRGQYGYFMVNNENKRKNVIEMVKNIVASIN 141 Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKV 196 + D + T + +E++ G I ++ ++ + G D E ++K+ Sbjct: 142 VPLSIKFRLIDGEDGKPDVDITCKFAKELEDAGVSLISVHGRAKNSNKAGPVDAEAIRKI 201 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 E +P++A+GG T E +E F+++ G + + + Sbjct: 202 AESVSIPVMANGGVRTKEEAIEMFKESHAAGVMVGQGLLMNPKAFSDTPEH 252 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 66/185 (35%), Gaps = 18/185 (9%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDI-VPLAKRYAEEGADELVFYDITA-SSDGR 59 + K I+ ++V + + + + DI AK + G + + S+ Sbjct: 132 MVKNIVASINVPLSIKFRLIDGEDGKPDVDITCKFAKELEDAGVSLISVHGRAKNSNKAG 191 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTL------ 112 VD + ++AE + IP GG+++ E+A ++ A + + L +P Sbjct: 192 PVDAEAIRKIAESVSIPVMANGGVRTKEEAIEMFKESHAAGVMVGQGLLMNPKAFSDTPE 251 Query: 113 ---------ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 +L + + ++ VN+ GD +T + E ++ Sbjct: 252 HDPVAISREYLQLWKEYPDPNFFIARRHIFNFFDEIVRVNKPVGDYLKTTHSIEELESFL 311 Query: 164 QEVQK 168 + + Sbjct: 312 TDYEN 316 >UniRef50_B9XLX7 Dihydrouridine synthase DuS n=3 Tax=Verrucomicrobia RepID=B9XLX7_9BACT Length = 340 Score = 90.3 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 19/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%) Query: 76 PFCV---AGGIKSL-EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 P I SL A ++ + + +N A ++ R G+ +D+ Sbjct: 64 PVIAQMIGNDIPSLVRSAKELQQYPIVAVDLNLGCPA--PIVYRKCAGGGLLREPKRVDS 121 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGYDL 190 A V T + + K + ++ + + Sbjct: 122 ILGALRDAISVKFTVKTRIGFDSTGV-FDELLPIFAKHSIDLLTVHGRTVQEMYRSEVHY 180 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + + + + P++A+G + + E + G + + +++ + Sbjct: 181 DFIARAAQAVSCPVLANGNVYSAKKAEEVLQFTGARGLMIGRGVIRNPWLFHQIRHHRRG 240 Query: 251 QGV 253 + + Sbjct: 241 EPI 243 Score = 76.4 bits (187), Expect = 8e-13, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 4/110 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIP 76 VK + + D L +A+ D L + T R V +++R A+ + P Sbjct: 136 VKTRIGFDSTGVFD--ELLPIFAKHSIDLLTVHGRTVQEMYRSEVHYDFIARAAQAVSCP 193 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 G + S + A ++L GA + I + +P L ++ + I Sbjct: 194 VLANGNVYSAKKAEEVLQFTGARGLMIGRGVIRNPWLFHQIRHHRRGEPI 243 >UniRef50_Q6R3H4 Conserved protein n=1 Tax=Methylosinus sp. LW2 RepID=Q6R3H4_9RHIZ Length = 230 Score = 89.9 bits (222), Expect = 7e-17, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 82/252 (32%), Gaps = 39/252 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAK-RYAEEGADELVFYDIT 53 ++IP +D+R+G V+ V D + +A+ + + D+ Sbjct: 1 MQVIPVIDIRNGVAVRAVAGDRKNYAPLTTPLAATSDPLDVARGLMTLHPFEAIYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A S + + + G L GA + Sbjct: 61 AIERRGNNRTSIAAIAKAIAPARLWLDAGFT------GALEVGAWR-------------- 100 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 V G +T +++ + + + TR + + + + Sbjct: 101 -----SLENVDPVFGSETLQESDDLRADKHAILSLDFSTRSFLGDPR--LYDDESFWPDR 153 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +++ +++ G + G D+ + V + A+GGA ++ L ++A GAL A+ Sbjct: 154 LIVMTLSRVGAKQGPDVSRFYDVAARAGSRQVCAAGGARGLDDLL-VLKEAGAAGALVAT 212 Query: 233 VFHKQIINIGEL 244 H+ + L Sbjct: 213 ALHEGRLTPANL 224 >UniRef50_Q5ZRM0 Nitrogen regulation protein n=6 Tax=Legionella RepID=Q5ZRM0_LEGPH Length = 329 Score = 89.9 bits (222), Expect = 7e-17, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 55/162 (33%), Gaps = 6/162 (3%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E AAK+ S GAD I IN ++ + ++ + Sbjct: 90 AEAAAKLQSLGADLIDINCGCPKS-----KIRKKGAGSALLEDPQKLIAIISRVRAAISI 144 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPL 204 + L ++++ GA ++++ + + +Q+ ++ ++P+ Sbjct: 145 PLTIKIRIQNNEKDLTLAKQIEDAGAHALIVHGRRWTEDYDIPCNWQQIANIKNAVNIPV 204 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 I +G + +A + DG + + + +L Sbjct: 205 IVNGDINNIFSLRKALEISACDGFMISRAGTGKPWLYRDLLN 246 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 8/116 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDK 63 R+ + + +K N + + LAK+ + GA L+ + + Sbjct: 137 RVRAAISIP--LTIKIRIQNNEKD----LTLAKQIEDAGAHALIVHGRRWTEDYDIPCNW 190 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 ++ + ++IP V G I ++ K L D I+ P L L + Sbjct: 191 QQIANIKNAVNIPVIVNGDINNIFSLRKALEISACDGFMISRAGTGKPWLYRDLLN 246 >UniRef50_C1EGQ3 Predicted protein n=2 Tax=Micromonas RepID=C1EGQ3_9CHLO Length = 353 Score = 89.9 bits (222), Expect = 7e-17, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 52/194 (26%), Gaps = 34/194 (17%) Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 D T + +V + V+ + I + GA S L P Sbjct: 94 DATRALQSAMVAVNDVAAI------------DINMGCPLKFSTASGA-----GSALLKKP 136 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + + + + R T +T++ + ++K G Sbjct: 137 ETVHDILTTLRRNLPA----------------ETHVTCKIRLLETIEQTVELARVIEKCG 180 Query: 171 AGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 ++ +++K+V E P+IA+G F + + A+ Sbjct: 181 VSAFGVHGRYVGQRPRDAAHWDKIKQVVESVSCPVIANGDVFEYSDFEKIRAETGAAAAM 240 Query: 230 AASVFHKQIINIGE 243 + Sbjct: 241 CGRGAMWNQSIFRK 254 Score = 74.5 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 2/96 (2%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPFCVA 80 + R E I V LA+ + G + R + +V E + P Sbjct: 159 KIRLLETIEQTVELARVIEKCGVSAFGVHGRYVGQRPRDAAHWDKIKQVVESVSCPVIAN 218 Query: 81 GGIKSLEDAAKI-LSFGADKISINSPALADPTLITR 115 G + D KI GA A+ + ++ + Sbjct: 219 GDVFEYSDFEKIRAETGAAAAMCGRGAMWNQSIFRK 254 >UniRef50_A4BCJ5 NifR3/Smm1 family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCJ5_9GAMM Length = 314 Score = 89.5 bits (221), Expect = 9e-17, Method: Composition-based stats. Identities = 20/202 (9%), Positives = 51/202 (25%), Gaps = 16/202 (7%) Query: 44 ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISIN 103 EL T + G V + + + E+A + + G+ + +N Sbjct: 50 VPELHQQGRTGA--GTPVRVQLLGSHPQAL------------AENALRAIELGSHGLDLN 95 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 + ++ + + + + Sbjct: 96 FGCPSKTVNASKGGAVLLTEPESIYAVVRSVRDALPGDQTLSAKMRLGFEDNSL-MWECA 154 Query: 164 QEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 ++ GA EI+++ + +P+I +G T A + Sbjct: 155 HAIRDGGANEIIVHARTKQQGYTPPAYWHLPADFEARLGIPMIINGEIWTPADAGRAQHE 214 Query: 223 ADVDGALAASVFHKQIINIGEL 244 A+ + + E+ Sbjct: 215 ANCSSIMLGRGAVRNPWLASEI 236 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 46/157 (29%), Gaps = 9/157 (5%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + A + GA+E++ + T + + IP Sbjct: 139 KMRLGFEDNSL--MWECAHAIRDGGANEIIVHARTKQQGYTPPAYWHLPADFEARLGIPM 196 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRF-----GVQCIVVGIDT 131 + G I + DA + I + A+ +P L + + R Q + + Sbjct: 197 IINGEIWTPADAGRAQHEANCSSIMLGRGAVRNPWLASEITGRHNQKSDWSQVHQLVVQF 256 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 W + + + ++ + Q+ Sbjct: 257 WQEVTQQMSPRYCAGRLKQWLNHLRLSFVEAERLFQR 293 >UniRef50_Q9NX74 tRNA-dihydrouridine synthase 2-like n=35 Tax=Metazoa RepID=DUS2L_HUMAN Length = 493 Score = 89.5 bits (221), Expect = 9e-17, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 50/169 (29%), Gaps = 10/169 (5%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 A+++ I +N + + + T + Sbjct: 98 AVARLVENDVAGIDVNMGCPKQYSTKGGMGAAL----LSDPDKIEKILSTLVKGTRRPVT 153 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIA 206 + R + +TL V+ +++ G I ++ ++ E +K + + +P+IA Sbjct: 154 CKIRILPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLSIPVIA 213 Query: 207 SGG----AGTMEHFLEAFRDADVDGALAASVFHKQI-INIGELKAYLAT 250 +GG + + + A I + E L Sbjct: 214 NGGSHDHIQQYSDIEDFRQATAASSVMVARAAMWNPSIFLKEGLRPLEE 262 Score = 69.9 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 44/157 (28%), Gaps = 14/157 (8%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGG----I 83 + D + L KR G + + V + +A+ + IP GG I Sbjct: 162 LEDTLSLVKRIERTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLSIPVIANGGSHDHI 221 Query: 84 KSLEDAAKILSF-GADKISINSPALADPTLI--------TRLADRFGVQCIVVGIDTWYD 134 + D A + + A+ +P++ + ++ + Sbjct: 222 QQYSDIEDFRQATAASSVMVARAAMWNPSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNT 281 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + + ++ + E GA Sbjct: 282 KYCLCQMLREQLESPQGRLLHAAQSSREICEAFGLGA 318 >UniRef50_A2EN54 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2EN54_TRIVA Length = 321 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 2/124 (1%) Query: 32 IVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 V AK E GA + + +A+ ++K V V + + IP V GGI SL+DA Sbjct: 160 TVDFAKHLEEAGASLITIHGRSAAQDKHGPLNKELVKAVVQAVSIPVIVNGGINSLDDAR 219 Query: 91 KIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 ++ GA L DPTL + + + +D + ++ Sbjct: 220 NMIRETGAIAAMSAQSLLMDPTLFDKNGRQPNTVFALEYLDIFEKYHVPFDVARRHFFYF 279 Query: 150 SRTR 153 Sbjct: 280 FDKE 283 Score = 88.0 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 60/175 (34%), Gaps = 7/175 (4%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD-RFGVQCIVVGIDTWY 133 I + + L A + FG I IN + + Sbjct: 72 IQISGSIDVDLLTTAKSMSEFGVP-IDINLGCCQKVAKRGEYGYFMVDSEQKRQNVVNLI 130 Query: 134 DAETGKYHVNQYTGDESRTRVTQWE----TLDWVQEVQKRGAGEIVLNMMNQDGVRNGY- 188 + + V Y + T + T+D+ + +++ GA I ++ + ++G Sbjct: 131 KSIPSEITVPLYVKIRALTDESGIPSIPITVDFAKHLEEAGASLITIHGRSAAQDKHGPL 190 Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + E +K V + +P+I +GG +++ R+ A++A + Sbjct: 191 NKELVKAVVQAVSIPVIVNGGINSLDDARNMIRETGAIAAMSAQSLLMDPTLFDK 245 >UniRef50_A2ST44 Histidine biosynthesis protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST44_METLZ Length = 221 Score = 89.5 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 74/252 (29%), Gaps = 44/252 (17%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADEL--------VFYDITAS 55 ++I +D+ DG VV G + + E L D+ Sbjct: 1 MKVILAMDLMDGYVVHGKSGNRDHY--KPLTWGLSPSAEPLSYLSVMKPKYAYVADLDRI 58 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 ++ + + + I + L A+ I + P Sbjct: 59 GMCGDHTETILRLASIPEKLWVDRGCSIP-----EEYLPGVAN--IIGTETADAP----- 106 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR-VTQWETLDWVQEVQKRGAGEI 174 + + ++ ++E K I Sbjct: 107 --------------------FEEFTGGYLSVDVKDGKVIPDGLDPVEVIREADKYAFDGI 146 Query: 175 VLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +L ++ G +G DL+ K++R PL+ GG T++ DA DG + ++ Sbjct: 147 ILLNISSVGTESGIDLDFAKRIRAATKKPLLYGGGVNTLDDL-RTLCDAGYDGVIISTSV 205 Query: 235 HKQIINIGELKA 246 HK I + ++ Sbjct: 206 HKGKIPVEIVQE 217 >UniRef50_B2UL06 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=4 Tax=cellular organisms RepID=B2UL06_AKKM8 Length = 261 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 74/245 (30%), Gaps = 21/245 (8%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFR--------NHEIIGD--IVPLAKRYAEEGADELVFY 50 M R PC+D+ G+V + V + D A Y +G Sbjct: 1 MTRFR--PCIDLHGGRVKQIVGGTLTQDGVSLRTNFVSDRGAAWYADLYRRDGLSGGHVI 58 Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 + + V GG + E+A + +S GA + + + L D Sbjct: 59 KL------GPGNDHAAREALAAWPGGLQVGGG-MTPENAEEWISAGASHVIV-TSCLFDA 110 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 R+ + V D + +T+ +V Sbjct: 111 EGTLRMDRLKDLVSAVGAERLVLDLSCRRVQGGWAVAMNRWQTLTELRVTAETLDVLAEH 170 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA-FRDADVDGAL 229 E +++ + +G+ +G D E ++ + +P+ +GG ++ E A Sbjct: 171 CAEFLIHAADVEGLCSGIDRELVEMLGNWRRLPMTYAGGISRIQDIDEIDALSGGTMDAT 230 Query: 230 AASVF 234 S Sbjct: 231 VGSAL 235 >UniRef50_A6GHV6 Dihydrouridine synthase family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHV6_9DELT Length = 321 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 18/179 (10%), Positives = 48/179 (26%), Gaps = 4/179 (2%) Query: 70 AEVIDIPFCVAGGI--KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 + + + GG A ++ GA I +N A + V Sbjct: 57 RAGVPVFVQLLGGEPHWMARAAETAVALGAPGIDLNFGCPAKTVNSSDGGATLLKDPCRV 116 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 T + ++ + + GA + ++ + + Sbjct: 117 EAVTRAVRAAVPAELPVTVKIRVGWED-PSPVVEIARAAEAGGASWLTIHGRTRRQLYKP 175 Query: 188 Y-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 D E + + + + ++A+G + EA + + + + + Sbjct: 176 PVDYEAIGRAQAAVSMAVVANGDLFGVPSLFEAAQRSGCTAFMIGRGAMGRPELFARAR 234 Score = 80.3 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 29/101 (28%), Gaps = 4/101 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK E +V +A+ GA L + T VD + R + + Sbjct: 135 VKIRVGW--EDPSPVVEIARAAEAGGASWLTIHGRTRRQLYKPPVDYEAIGRAQAAVSMA 192 Query: 77 FCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRL 116 G + + G I A+ P L R Sbjct: 193 VVANGDLFGVPSLFEAAQRSGCTAFMIGRGAMGRPELFARA 233 >UniRef50_Q9T0J6 tRNA-dihydrouridine synthase 3-like n=10 Tax=Magnoliophyta RepID=DUS3L_ARATH Length = 700 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 24/243 (9%), Positives = 74/243 (30%), Gaps = 18/243 (7%) Query: 19 KGVQFRNHEIIGDIVPLA------KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVA 70 K + FR+ + + + GAD T G+ + + + R + Sbjct: 341 KLIDFRDKLYLA-PLTTVGNLPFRRLCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHS 399 Query: 71 EVIDIPFCVAGGI-KSLEDAAKILSFGA--DKISINSPALADPTLITRLADRFGVQCIVV 127 + G ++ +++ D I IN D + + + + Sbjct: 400 SEDLFGVQICGSYPDTVSRVVELIDRECTVDFIDINMGCPIDMVVNKSAGSALLNKPLRM 459 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + + + + + + ++ GA + ++ ++ + Sbjct: 460 KNIVEVSSSIVETPITIKVRTAFFEGKNRID--SLIADIGNWGATAVTIHGRSRQQRYSK 517 Query: 188 -YDLEQLKKVREV--CHVPLIASGGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGE 243 D + + + + ++ +I +G + + + D ++ + A + E Sbjct: 518 SADWDYIYQCTKNATTNLQVIGNGDVYSYLDWNKHKSDCPELSSCMIARGALIKPWIFTE 577 Query: 244 LKA 246 +K Sbjct: 578 IKE 580 >UniRef50_O53835 Probable tRNA-dihydrouridine synthase n=107 Tax=Actinobacteria (class) RepID=DUS_MYCTU Length = 389 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 46/175 (26%), Gaps = 4/175 (2%) Query: 84 KSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + A I G AD I +N + + G + Sbjct: 97 TTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTD 156 Query: 143 -NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC 200 LD + + GA + L+ +G D EQ+ ++++ Sbjct: 157 IPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAAQRYSGTADWEQIARLKQHV 216 Query: 201 -HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +P++ +G L DG + + EL A Sbjct: 217 RTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAP 271 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 3/76 (3%) Query: 49 FYDITASSDGRV-VDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILS-FGADKISINSP 105 + TA+ D ++R+ + + IP G I DA ++S G D + I Sbjct: 191 LHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRG 250 Query: 106 ALADPTLITRLADRFG 121 L P L L+ F Sbjct: 251 CLGRPWLFAELSAAFT 266 >UniRef50_D2VK62 Dihydrouridine synthase, DuS n=1 Tax=Naegleria gruberi RepID=D2VK62_NAEGR Length = 388 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 53/183 (28%), Gaps = 6/183 (3%) Query: 74 DIPFCVAGGIKSLE---DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV--G 128 +P + G S E A+++ G D I +N ++ + Sbjct: 113 KVPTVLQLGTSSPELALQVAELMIDGYDAIDVNMGCPKKFSVKGGMGSALLRPENQENAF 172 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-G 187 + + + + R T T++ +++Q G I ++ Sbjct: 173 AILRALVKGIQEKHGKPVTCKIRLLDTTENTIELYEKLQATGVTAICVHARYIPQRPREK 232 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + V ++ VP+IA+G E + A + + K Sbjct: 233 AHSHLVDPVSKITKVPIIANGDVFKPEDIDRIKDLTGCSSVMIARGAMWNLSIFRKEKVL 292 Query: 248 LAT 250 L Sbjct: 293 LDK 295 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 20/186 (10%), Positives = 59/186 (31%), Gaps = 3/186 (1%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAE 71 + G+ V + R + + + L ++ G + + R V V++ Sbjct: 185 KHGKPV-TCKIRLLDTTENTIELYEKLQATGVTAICVHARYIPQRPREKAHSHLVDPVSK 243 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + +P G + ED +I G + I A+ + ++ + + + Sbjct: 244 ITKVPIIANGDVFKPEDIDRIKDLTGCSSVMIARGAMWNLSIFRKEKVLLDKLVVAKELL 303 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 +++Y + + + + + + L+ + + + Sbjct: 304 DELIKYNYHSGLSKYILKRMFETHAKTKLYERLAKCKGFDDLHKALHFNDNEDLSKELTP 363 Query: 191 EQLKKV 196 EQ+ + Sbjct: 364 EQIASI 369 >UniRef50_Q4P1U2 tRNA-dihydrouridine synthase 3 n=4 Tax=Eukaryota RepID=DUS3_USTMA Length = 867 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 49/215 (22%), Gaps = 27/215 (12%) Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGG-----IKSLEDAAKILSFGADKISINSPALADPTL 112 G + S V R + GG + E + G D + IN D Sbjct: 530 GNAAEWSLVRRHESERIFGTQLCGGKPDLLVPVAEALKAEVGDGLDFVDINCGCPIDLVF 589 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + T Q + + + Sbjct: 590 NKGAGSALLDHPT-KLSKIVRGMNAVLGDTPLTIKLRTGTGAKQTTHKIFAKAQTEWRVA 648 Query: 173 EIVLNMMNQDGVRN-GYDLEQLKKVR--------------------EVCHVPLIASGGAG 211 L+ ++ D + E+ +P+ +G Sbjct: 649 AATLHGRSRKQRYKNDADWGYIATCANTLRESVSEWNESSRFADEPEMVPIPVYGNGDVY 708 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + + E VDG + A + E+K Sbjct: 709 SWQDYYERIERTHVDGEMIARGALIKPWLFTEIKE 743 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 24/168 (14%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA------ 70 +K + + AK E + + + D +++ A Sbjct: 622 IKLRTGTGAKQTTHKI-FAKAQTEWRVAAATLHGRSRKQRYKNDADWGYIATCANTLRES 680 Query: 71 --------------EVIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITR 115 E++ IP G + S +D +I D I AL P L T Sbjct: 681 VSEWNESSRFADEPEMVPIPVYGNGDVYSWQDYYERIERTHVDGEMIARGALIKPWLFTE 740 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 + +R I + +Y + + D T+ + + Sbjct: 741 IKER-RDWDISSRERLDMMRKFAEYGLTHWGSDTHGVNTTRRFMCEMM 787 >UniRef50_P53759 tRNA-dihydrouridine synthase 1 n=19 Tax=Ascomycota RepID=DUS1_YEAST Length = 423 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 56/196 (28%), Gaps = 14/196 (7%) Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE---DAAKILSFGADKISINSPALADPT 111 S R + S + +D P V E AAK++ D + +N Sbjct: 69 SKKYREDNWSSLD--GSSVDRPLVVQFCANDPEYLLAAAKLVEDKCDAVDLNLGCPQGIA 126 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 +G + T ++ + R ++L++ + V GA Sbjct: 127 KKGH----YGSFLMEEWDLIHNLINTLHKNLKVPVTAKIRIFDDCEKSLNYAKMVLDAGA 182 Query: 172 GEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVP--LIASGGAGTMEHFLEAFRDADVD 226 + ++ ++ + E +K +R+ A+G E D Sbjct: 183 QFLTVHGRVREQKGQKTGLANWETIKYLRDNLPKETVFFANGNILYPEDISRCMEHIGAD 242 Query: 227 GALAASVFHKQIINIG 242 ++A Sbjct: 243 AVMSAEGNLYNPGVFN 258 Score = 66.4 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 9/102 (8%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID- 74 K F + E + AK + GA L + G+ + + + + + Sbjct: 160 KIRIFDDCEKS---LNYAKMVLDAGAQFLTVHGRVREQKGQKTGLANWETIKYLRDNLPK 216 Query: 75 -IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLIT 114 F G I ED ++ + GAD + L +P + Sbjct: 217 ETVFFANGNILYPEDISRCMEHIGADAVMSAEGNLYNPGVFN 258 >UniRef50_B6JXB4 tRNA-dihydrouridine synthase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JXB4_SCHJY Length = 347 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 54/168 (32%), Gaps = 10/168 (5%) Query: 76 PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 P L A++I++ D I IN + + Q V Sbjct: 85 PVI-------LAQASEIVAPYTDAIGINCGCPQPWAIQEGIGSALLKQPQKVHELVRSVK 137 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLK 194 +T +Q ++ GA I ++ + + DLE ++ Sbjct: 138 SALGETFCVEVKIR--LDNDLEKTRQLMQTAERAGADFITVHGRRRADRSSFPVDLEAIR 195 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 VR +P++A+G ++ L+ + DG ++A + Sbjct: 196 SVRPCVSIPVVANGDVNDLDTGLKIAEYTNTDGVMSARGLMENPALFA 243 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 48/179 (26%), Gaps = 5/179 (2%) Query: 21 VQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPFCV 79 V+ R + L + GAD + + + VD + V + IP Sbjct: 148 VKIRLDNDLEKTRQLMQTAERAGADFITVHGRRRADRSSFPVDLEAIRSVRPCVSIPVVA 207 Query: 80 AGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 G + L+ KI D + + +P L C+ + Sbjct: 208 NGDVNDLDTGLKIAEYTNTDGVMSARGLMENPALFAGYTST-PWGCVEKFVAYATGYSLN 266 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI--VLNMMNQDGVRNGYDLEQLKK 195 + T+ E + E + + G +E +++ Sbjct: 267 FQLFEHHLMTMMGKMTTKRERMQVPSESYASVIDWLDETFVLRRPGETEFGTTIEPVRR 325 >UniRef50_D1N0Y1 Dihydrouridine synthase DuS n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0Y1_9BACT Length = 334 Score = 87.6 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 61/217 (28%), Gaps = 13/217 (5%) Query: 37 KRYAEEGADELVF---YDITASSDGRVVDKSWVSRVAEVIDIPFCVAG----GIKSLEDA 89 +R A G F D+ + + R + R E + + G I+ D Sbjct: 23 RRAARAGGCRFAFTEMVDVASLTYARERSAGMLRRGPEEEFLGVQLVGADHEFIRRAADV 82 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + + + N G + + Sbjct: 83 --VNEYEFSVVDFNLGCPVPKVAKKGAGAELGRHLDAALA--CFAIIAERSRHPVTAKIR 138 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREV-CHVPLIAS 207 TL + + + GA I ++ ++ +G + ++ VRE V +IA+ Sbjct: 139 IVDAEDPAPTLALAKGLAELGAQAITVHGRIKEAFYSGPVNFGMIRAVREALPGVQVIAN 198 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 GG + E R+ + A EL Sbjct: 199 GGVTGRVKYQEIRRETGCSLVMLARGAMGNPWLFNEL 235 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 8/128 (6%) Query: 25 NHEIIGDI---VPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVID-IPFCV 79 D + LAK AE GA + + + V+ + V E + + Sbjct: 138 RIVDAEDPAPTLALAKGLAELGAQAITVHGRIKEAFYSGPVNFGMIRAVREALPGVQVIA 197 Query: 80 AGGIKSLEDAAKI-LSFGADKISINSPALADPTLITR--LADRFGVQCIVVGIDTWYDAE 136 GG+ +I G + + A+ +P L L D + I + Sbjct: 198 NGGVTGRVKYQEIRRETGCSLVMLARGAMGNPWLFNELSLGDAYVPPDIDEWFGVIREHV 257 Query: 137 TGKYHVNQ 144 G + Sbjct: 258 EGMIELYG 265 >UniRef50_A6QPA8 DUS4L protein n=2 Tax=Eutheria RepID=A6QPA8_BOVIN Length = 238 Score = 87.6 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 4/157 (2%) Query: 74 DIPFCV---AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 D P V A + L DAA+I+ A+ I IN L + + D Sbjct: 81 DCPLIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWALAEGYGACL-INKPELVRD 139 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 + + R T+D ++ + G I ++ + Sbjct: 140 MVKQVRNQVENPRFSVSIKIRIHDDLTRTVDLCRKAEATGVSWITVHGRTVEERHQPVHY 199 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 E +K ++E +P++A+G +++ + DG Sbjct: 200 EAIKIIKESMSIPIVANGDIRSLKEAENVWHTTGTDG 236 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 ++ R H+ + V L ++ G + + T + V + + E + IP Sbjct: 156 SIKIRIHDDLTRTVDLCRKAEATGVSWITVHGRTVEERHQPVHYEAIKIIKESMSIPIVA 215 Query: 80 AGGIKSLEDAAKI 92 G I+SL++A + Sbjct: 216 NGDIRSLKEAENV 228 >UniRef50_D0P0N4 tRNA-dihydrouridine synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P0N4_PHYIN Length = 480 Score = 87.2 bits (215), Expect = 4e-16, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 53/174 (30%), Gaps = 14/174 (8%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA+ ++ + IN ++ + + V N Sbjct: 94 KAAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNL----NIPVS 149 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPLIA 206 + R +T+D + ++ GA + ++M + + ++L V VP++A Sbjct: 150 CKIRLLPEIQDTVDLARRLEDAGACAVGVHMRQTHERPHDKASWDRLAPVVSALSVPVLA 209 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE---------LKAYLATQ 251 +G E + + + L A + ++ YL Sbjct: 210 NGDVFMHEDINKLRKLSGASSFLIARGALANPSIFRKEGRLPIDQVVREYLKAA 263 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 2/89 (2%) Query: 29 IGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 I D V LA+R + GA + + T ++ V + +P G + E Sbjct: 158 IQDTVDLARRLEDAGACAVGVHMRQTHERPHDKASWDRLAPVVSALSVPVLANGDVFMHE 217 Query: 88 DAAKILS-FGADKISINSPALADPTLITR 115 D K+ GA I ALA+P++ + Sbjct: 218 DINKLRKLSGASSFLIARGALANPSIFRK 246 >UniRef50_Q0G4J3 HisA/HisF family protein, putative n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G4J3_9RHIZ Length = 237 Score = 87.2 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 41/249 (16%), Positives = 77/249 (30%), Gaps = 35/249 (14%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEII---------GDIVPLAKRYA-EEGADELVFYDI 52 A ++IP LD+ +G VV+G R + V +A+ G D + D+ Sbjct: 7 AMQLIPVLDLMNGLVVRGEGGRRESYRPIETPLADGAEPVAVARGLIGATGTDVMYVADL 66 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + G + + E D + G I +A L Sbjct: 67 D-AIMGGEAQVPVLQALGEAFP-------------DLRFWVDAGFQTIDAAEALIAAVAL 112 Query: 113 IT-RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 R+ FG + + ++ + + Sbjct: 113 GAGRIVPVFGTETLDETEALARMDGPAVLSLDFGAEGYRGSPALLEGA--------ELWP 164 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGALA 230 ++V+ + G G D ++L+++ + A+GG +A V GAL Sbjct: 165 ADVVVMSLAAVGSSGGPDFQRLEEIVARAGTRRVHAAGGVRGRTDL-DALAAMGVAGALV 223 Query: 231 ASVFHKQII 239 AS H + + Sbjct: 224 ASALHNRRL 232 >UniRef50_Q9VY45 CG1434 n=20 Tax=Arthropoda RepID=Q9VY45_DROME Length = 473 Score = 86.8 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 8/156 (5%) Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 K+L + IN + ++ + + + T ++ + Sbjct: 114 KLLQRDISGLDINMGCPKEFSIKGGMGAAL----LADPDKAAHILRTLCSGLDIPVTCKI 169 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL-EQLKKVREVCHVPLIASGG 209 R T+D VQ++ G I ++ +D E L+ V + +P+IA+GG Sbjct: 170 RILPDVEGTIDLVQKLAATGIAAIGIHARTRDERPQHPAHPEVLRAVAQAVDIPIIANGG 229 Query: 210 ---AGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + + + D + A + Sbjct: 230 SKNMHCYDDLRKFQMECGADSVMVARAAQINVSIFR 265 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 13/162 (8%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVA 80 + R + + L ++ A G + + T + VA+ +DIP Sbjct: 168 KIRILPDVEGTIDLVQKLAATGIAAIGIHARTRDERPQHPAHPEVLRAVAQAVDIPIIAN 227 Query: 81 GGIKS---LEDAAKI-LSFGADKISINSPALADPTL--------ITRLADRFGVQCIVVG 128 GG K+ +D K + GAD + + A + ++ + L +++ C+ Sbjct: 228 GGSKNMHCYDDLRKFQMECGADSVMVARAAQINVSIFRPEGLLPMDELIEKYLRLCVDYD 287 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + + + R Q +TL + E+ + G Sbjct: 288 NAPHNAKYCVQSILRELQETPRGKRFLQCQTLQQICEIWELG 329 >UniRef50_C0NEG2 tRNA-dihydrouridine synthase n=5 Tax=Ajellomyces RepID=C0NEG2_AJECG Length = 583 Score = 86.8 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 49/160 (30%), Gaps = 9/160 (5%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA+ + D + +N +G + T ++ Sbjct: 132 QAARAVEPFCDAVDLNLGCPQGIARKGH----YGAFLQEHPDLIYELINTLHTQLSIPVT 187 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVC--HV 202 + R + T+ +TL++ + + GA I ++ ++ D ++ +RE Sbjct: 188 AKFRIQETKEKTLEYARIILSAGASIITVHGRRREQKGHNTGLADWSYIRYLRENLPADT 247 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + A+G + DG ++A Sbjct: 248 VIFANGNILNHGDIEKCLEATGADGVMSAEGSLCDPTIFS 287 Score = 73.7 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 6/98 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVI--DIP 76 +FR E + A+ GA + + G D S++ + E + D Sbjct: 189 KFRIQETKEKTLEYARIILSAGASIITVHGRRREQKGHNTGLADWSYIRYLRENLPADTV 248 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 G I + D K L GAD + +L DPT+ Sbjct: 249 IFANGNILNHGDIEKCLEATGADGVMSAEGSLCDPTIF 286 >UniRef50_A4RU69 Predicted protein n=3 Tax=Chlorophyta RepID=A4RU69_OSTLU Length = 345 Score = 86.8 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 3/153 (1%) Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 ++++ I +N + + R Q +V + + Sbjct: 102 ELVARDVAAIDVNMGCPKHFSTSGGMGARLLSQPELVRDILTTLRRNLPST--THVTCKI 159 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGG 209 R ++ ET + + ++ G ++ +K V E P+IA+G Sbjct: 160 RLLESERETAELAKMIESCGVSAFAVHGRYIPQRPREPAHWNLIKNVVEAVDCPVIANGD 219 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 E F A+ A + Sbjct: 220 VECYEDFARIRAQTGAASAMCARGAQWNLSIFR 252 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 29/118 (24%), Gaps = 2/118 (1%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPFCVAGGIKSLED- 88 + LAK G + R + + V E +D P G ++ ED Sbjct: 167 ETAELAKMIESCGVSAFAVHGRYIPQRPREPAHWNLIKNVVEAVDCPVIANGDVECYEDF 226 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 A GA A + ++ + + + Sbjct: 227 ARIRAQTGAASAMCARGAQWNLSIFRPEGMLPIDVVKKHFVQRAIEYDNPWNFTKFQL 284 >UniRef50_Q1QZQ6 Dihydrouridine synthase, DuS n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZQ6_CHRSD Length = 340 Score = 86.4 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 48/164 (29%), Gaps = 3/164 (1%) Query: 86 LEDAAKILSFGADKISINSPALADP-TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 +A + + GA ++ +N A A V + + Sbjct: 85 AANAVRAQALGARQVDLNFGCPAKTVNRHDGGASLLRQPERVHTVVRAVAEALAPLGIAV 144 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVP 203 L + + GA +V++ + E + +++ +P Sbjct: 145 TAKIRLGFDDKHV-ALACAEAAESGGAAHLVVHARTRREGYRPPAHWEWIGRIQARLSIP 203 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +IA+G T+E + +A + + +K + Sbjct: 204 VIANGDIWTLEDYWKARTLSGCADVMLGRGMLADPWLARRIKHW 247 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 2/97 (2%) Query: 47 LVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINS 104 LV + T W+ R+ + IP G I +LED K + G + + Sbjct: 173 LVVHARTRREGYRPPAHWEWIGRIQARLSIPVIANGDIWTLEDYWKARTLSGCADVMLGR 232 Query: 105 PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 LADP L R+ ++ AE + Sbjct: 233 GMLADPWLARRIKHWQRHGEMLPATPWSARAEILHAY 269 >UniRef50_A4RVX6 Predicted protein n=2 Tax=Ostreococcus RepID=A4RVX6_OSTLU Length = 371 Score = 86.4 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 57/164 (34%), Gaps = 3/164 (1%) Query: 86 LEDAAKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 LE AA+ L+ A +I +N A+ V A+ + Sbjct: 79 LELAARHLATEKSAPRIDLNCGCPANVVTGKGAGSSLLRDPEYVYACVKAVADGARGSGA 138 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 T + + ++ GA + L+ + +G + E++ ++V + Sbjct: 139 HVTMKLRSGYDDSSLLRENLLAAREAGARFVSLHARTRAQGYSGRANWEEIAFAKDVLDI 198 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 P++ +G + + E R +D DG + + + + A Sbjct: 199 PVLGNGDVTSPQRAAELLRVSDADGIMLGRGAVQDPLIFRRIAA 242 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + E GA + + T + + ++ +V+DIP Sbjct: 143 KLRSGYDDSSLLR--ENLLAAREAGARFVSLHARTRAQGYSGRANWEEIAFAKDVLDIPV 200 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFG 121 G + S + AA++L AD I + A+ DP + R+A Sbjct: 201 LGNGDVTSPQRAAELLRVSDADGIMLGRGAVQDPLIFRRIAATVS 245 >UniRef50_Q9KT00 tRNA-dihydrouridine synthase C n=75 Tax=Gammaproteobacteria RepID=DUSC_VIBCH Length = 323 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 3/155 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+A + GA I +N A ++ ++ + H+ Sbjct: 78 AENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQVVKACRDAVPAHIPVS 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR--NGYDLEQLKKVREVCHVP 203 + + V V + A E+ ++ + G + + ++R+ C +P Sbjct: 138 AKIRLGWED-PEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHYIDQIRQKCSIP 196 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 LIA+G + VD + Sbjct: 197 LIANGEVWNYADGQACIQTTGVDSLMVCRGALNVP 231 Score = 74.1 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 47/162 (29%), Gaps = 5/162 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD--KSWVSRVAEVIDIP 76 K E D + A+ ADEL + T + + + ++ ++ + IP Sbjct: 139 KIRLGW--EDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHYIDQIRQKCSIP 196 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + + D + G D + + AL P L + +D Sbjct: 197 LIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKHNHAAMPWHEVVDLLLRY 256 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + ++ +R + + + L Sbjct: 257 TQFEVRGDKGKYYPNRIKQWFAYLRHAYPQANELFGELRTLT 298 >UniRef50_A8PTG4 tRNA-dihydrouridine synthase 3 n=1 Tax=Malassezia globosa CBS 7966 RepID=DUS3_MALGO Length = 766 Score = 86.1 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 53/217 (24%), Gaps = 27/217 (12%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGG-----IKSLEDAAKILSFGADKISINSPALADP 110 G + S V R V G + + E A+ + G D + +N D Sbjct: 433 LQGHASEWSLVRRWEGERIFGTQVCGAKPELLVPTAEVLAREVGRGLDFVDVNCGCPIDL 492 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + + T + + + G Sbjct: 493 VYNKGAGSALLDHAN-KLGRIVRGMSEALGEIPLTIKLRTGTTSKPTTHKIFARAQTEWG 551 Query: 171 AGEIVLNMMNQDGVRN-GYDLEQLKKVREV--------------------CHVPLIASGG 209 G + L+ ++ D ++ + VP+ +G Sbjct: 552 VGGLSLHGRSRKQRYKNDADWAYIRTCVDTLHDAVRTWNEEPQHADEPDMVPVPVYGNGD 611 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + A VDG + A + E+K Sbjct: 612 VYGWRDYYDHLEHAHVDGTMIARGALIKPWIFTEIKE 648 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 21/182 (11%), Positives = 48/182 (26%), Gaps = 24/182 (13%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEV---- 72 +K + + A+ E G L + + + D +++ + Sbjct: 527 IKLRTGTTSKPTTHKI-FARAQTEWGVGGLSLHGRSRKQRYKNDADWAYIRTCVDTLHDA 585 Query: 73 ----------------IDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 + +P G + D L D I AL P + T Sbjct: 586 VRTWNEEPQHADEPDMVPVPVYGNGDVYGWRDYYDHLEHAHVDGTMIARGALIKPWIFTE 645 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + +R I + Y + + D T+ + + + ++ Sbjct: 646 IKER-RDWDISSRERLDMIRQYASYGLTHWGSDTQGVNTTRRFLCEMLSFTHRYVPLGLL 704 Query: 176 LN 177 + Sbjct: 705 DH 706 >UniRef50_Q1N033 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N033_9GAMM Length = 321 Score = 85.7 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 46/161 (28%), Gaps = 2/161 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+A + GA ++IN + + R + +Q Sbjct: 78 AENACRAAELGAPVVNINFGCPSRF-VNGRCGGAYLLQFPDQIHTILESVRKALPEHVPL 136 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 T L Q ++ G +I ++ + Q+K +++ VP+ Sbjct: 137 TAKMRLGFKDDALALANAQAMESAGVRDICIHARTKVQGYRPPAHWHQIKNIKQQVKVPI 196 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 IA+G + + + + +K Sbjct: 197 IANGEIWNRRDYEACKAASHCEHVMLGRGAVADPELAATIK 237 Score = 82.6 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 50/160 (31%), Gaps = 15/160 (9%) Query: 19 KGVQFRNHEIIGDIVPLA--KRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDI 75 K D + LA + G ++ + T R + + + + + Sbjct: 139 KMRLGFKD----DALALANAQAMESAGVRDICIHARTKVQGYRPPAHWHQIKNIKQQVKV 194 Query: 76 PFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRLA-------DRFGVQCIVV 127 P G I + D + + + + A+ADP L + + ++ Sbjct: 195 PIIANGEIWNRRDYEACKAASHCEHVMLGRGAVADPELAATIKGCESSDTWIHRLHDLIW 254 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 +D + Y + S +++ + + + ++ Sbjct: 255 MLDELVEFGGQSYAHGRIKQWFSFLKMSYEQAVPLFESLK 294 >UniRef50_A9V4A0 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V4A0_MONBE Length = 1116 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 53/162 (32%), Gaps = 6/162 (3%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 ++ AA+IL D I +N + FG + + + Sbjct: 112 VEDFVAAAQILEPFVDAIDLNLGCPQNTAKRE----GFGAYLMDDLPRVEAMLRAARAVL 167 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR--NGYDLEQLKKVREVC 200 ++ + R T T ++Q ++ G I ++ + D +++ R+ Sbjct: 168 HKPITAKVRLFPTLTATRAYLQMLEAAGCSLIAIHARLRGQRHHQGQPDFAMVREARDAV 227 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +PL+ +GG ++ V G + A + Sbjct: 228 DIPLLVNGGVRSLRQAESVLEYTGVAGVMVAGALLELPRLFA 269 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 39/136 (28%), Gaps = 9/136 (6%) Query: 37 KRYAEEGADELVFYDITASSDG--RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 + G + + D + V + +DIP V GG++SL A +L Sbjct: 189 QMLEAAGCSLIAIHARLRGQRHHQGQPDFAMVREARDAVDIPLLVNGGVRSLRQAESVLE 248 Query: 95 -FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 G + + L P L G + D + + + Sbjct: 249 YTGVAGVMVAGALLELPRLFA------GQMDLARLADARLYLQYAERYPPPAIRYVRDHL 302 Query: 154 VTQWETLDWVQEVQKR 169 +T + + + Sbjct: 303 MTLLKPVLYAHLWLDL 318 >UniRef50_Q0CMD2 TRNA-dihydrouridine synthase 1 n=18 Tax=Leotiomyceta RepID=Q0CMD2_ASPTN Length = 536 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 68/206 (33%), Gaps = 18/206 (8%) Query: 48 VFYDITASSDGRVVDKSWVS---RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 F+ T ++ G+ D ++ + + + FC +AA+ ++ D + +N Sbjct: 92 HFHP-TRAAVGKDDDAPYLDGNPAIDRPLFVQFCAN-NPDDFLEAAQHVAPYCDAVDLNL 149 Query: 105 PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 +G + + + R ++ +TL++ + Sbjct: 150 GCPQGIAKRGH----YGSFLQEDWDLIYKLINKLHTELPIPVTAKFRILESKEKTLEYAK 205 Query: 165 EVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVP----LIASGGAGTMEHFL 217 + GA I L+ ++ + D ++ +R+ ++P + A+G + Sbjct: 206 MILSAGASIITLHGRTREQKGHNTGVADWSYIRYLRD--NLPPETVIFANGNNLNHDDLE 263 Query: 218 EAFRDADVDGALAASVFHKQIINIGE 243 DG ++A + Sbjct: 264 RCLEATGADGVMSAEGNLSDPAIFSK 289 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 8/101 (7%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIP-- 76 +FR E + AK GA + + T G D S++ + + + P Sbjct: 190 KFRILESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGVADWSYIRYLRDNLP-PET 248 Query: 77 -FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITR 115 G + +D + L GAD + L+DP + ++ Sbjct: 249 VIFANGNNLNHDDLERCLEATGADGVMSAEGNLSDPAIFSK 289 >UniRef50_Q127F8 Dihydrouridine synthase, DuS n=7 Tax=Proteobacteria RepID=Q127F8_POLSJ Length = 344 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 45/154 (29%), Gaps = 2/154 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+AA++ + G I +N A + + + Sbjct: 84 AENAARLATLGPAGIDLNFGCPAAVVNRHGGGASLLKEPETLLAIVSAVRRAVPAGMPVS 143 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 ++ + + GAGE+V++ + E++ +R +P+ Sbjct: 144 AKMRLGYNDDSR-AVECALAIAEGGAGELVVHARTKAQAYKPPAYWERIADIRAAVQIPV 202 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +A+G T++ + + Sbjct: 203 VANGEIWTVDDARRCREASGCSMLMIGRGAVADP 236 Score = 80.7 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 4/107 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + V A AE GA ELV + T + ++ + + IP Sbjct: 145 KMRLG--YNDDSRAVECALAIAEGGAGELVVHARTKAQAYKPPAYWERIADIRAAVQIPV 202 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 G I +++DA + G + I A+ADP L + Sbjct: 203 VANGEIWTVDDARRCREASGCSMLMIGRGAVADPGLGLAIKAAMSHP 249 >UniRef50_B0XNW3 Dihydrouridine synthase family protein, putative n=4 Tax=Trichocomaceae RepID=B0XNW3_ASPFC Length = 541 Score = 85.3 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 60/198 (30%), Gaps = 23/198 (11%) Query: 72 VIDIPFCV---AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 D P V A +AA+ ++ D + +N +G Sbjct: 122 AFDRPLIVQFCANDPDDFLEAARHVAPYCDAVDLNLGCPQGIARKGH----YGAFLQEDW 177 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR--- 185 + + + R + ++ +TL++ + + GA I L+ ++ Sbjct: 178 DLIYKLINRLHKELPIPVTAKFRIQESKEKTLEYAKMILSAGASIITLHGRTREQKGHNT 237 Query: 186 NGYDLEQLKKVREVCHVP----LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 D ++ +R+ ++P + A+G + DG ++A Sbjct: 238 GLADWSYIRYLRD--NLPPETVIFANGNNLNHDDLERCLEATGADGVMSAEGNLSDPAIF 295 Query: 242 -------GELKAYLATQG 252 E + Y + Sbjct: 296 SKPPPVGSEGREYWRGRN 313 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 8/101 (7%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIP-- 76 +FR E + AK GA + + T G D S++ + + + P Sbjct: 198 KFRIQESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGLADWSYIRYLRDNLP-PET 256 Query: 77 -FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITR 115 G + +D + L GAD + L+DP + ++ Sbjct: 257 VIFANGNNLNHDDLERCLEATGADGVMSAEGNLSDPAIFSK 297 >UniRef50_B9HRE5 Predicted protein (Fragment) n=11 Tax=Eukaryota RepID=B9HRE5_POPTR Length = 362 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 26/243 (10%), Positives = 72/243 (29%), Gaps = 18/243 (7%) Query: 19 KGVQFRNHEIIGDIVPLA------KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVA 70 K + FR + + + GAD T G+ + + + R + Sbjct: 9 KLIDFRGKLYLA-PLTTVGNLPFRRVCKALGADVTCGEMAMCTNLLQGQASEWALLRRHS 67 Query: 71 EVIDIPFCVAGGI-KSLEDAAKILSFGA--DKISINSPALADPTLITRLADRFGVQCIVV 127 + G ++ +++ D I IN D + + + + Sbjct: 68 SEDLFGVQICGAYPDTVTRTVELIDQECTVDFIDINMGCPIDIVVNKGAGSSLLTKPMRM 127 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 +A +G + + + ++ K GA + ++ ++ + Sbjct: 128 KS--IIEATSGTVEKPITVKVRTGYFEGKSRIDSLIVDIGKWGASAVTIHGRSRQQRYSK 185 Query: 188 -YDLEQLKKVREVC--HVPLIASGGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGE 243 D + + + + ++ +G + + D ++ + A + E Sbjct: 186 LADWDYIYQCARKAPDSLQVLGNGDVFSFVDWNNHKSDCPELSSCMIARGALIKPWIFTE 245 Query: 244 LKA 246 +K Sbjct: 246 IKE 248 >UniRef50_UPI0001C3129C dihydrouridine synthase DuS n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3129C Length = 333 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 44/154 (28%), Gaps = 4/154 (2%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GA+ I +N T + AE + R Sbjct: 103 ETGANLIDLNMGCPVPKVCKTGAGAALVKDPDLAVEIARAAAEGS--GLPVTVKLRPGLR 160 Query: 154 VTQWETLDWVQEVQ-KRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 ++ + G + ++ + +G D E K++ E VP++ SGG Sbjct: 161 PGDRNGIELAYRLVADAGIAGLCIHPRHASQQHSGRPDYELAKRLVEELPVPVLISGGLR 220 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 + E E F + L A ++ Sbjct: 221 SAELVREVFEFTGAEAVLLARGSLGNPWLFEQVL 254 Score = 69.9 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Query: 18 VKGVQFRNHEIIGDIVPLA-KRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDI 75 VK + + LA + A+ G L + AS D R+ E + + Sbjct: 153 VKLRPGLRPGD-RNGIELAYRLVADAGIAGLCIHPRHASQQHSGRPDYELAKRLVEELPV 211 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA 117 P ++GG++S E ++ GA+ + + +L +P L ++ Sbjct: 212 PVLISGGLRSAELVREVFEFTGAEAVLLARGSLGNPWLFEQVL 254 >UniRef50_C4Z9Z2 Imidazole glycerol phosphate synthase subunit HisF, putative n=3 Tax=Clostridiales RepID=C4Z9Z2_EUBR3 Length = 427 Score = 84.9 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 85/228 (37%), Gaps = 16/228 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 K I+ L +++GQ VK + ++GD+ L + Y + G D+++ +D++ D + Sbjct: 5 KNIVATLYLKNGQAVKSAS--DMTVMGDVYNLCQLYNDSGIDKIIIFDLSTDDDEHEKNI 62 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + IDI C G I +ED K+L G ++ N+ + L +++FG Sbjct: 63 HTIENINRNIDIKVCAGGNINRIEDVKKLLYAGCLQVIFNATKDSSLELANVASEKFGKD 122 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 I++ I + + + + + L+ L Sbjct: 123 KILLSISNVDYIFKHQEEIEDTFHELLVLNIDIIDALEN-------------LTSTPYVV 169 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTME-HFLEAFRDADVDGALA 230 +D++++ V + + IA E + G L Sbjct: 170 YMPQFDMDKIIDVMKRETLRGIAGEFINDPENDIMALKTKLSDGGILV 217 >UniRef50_Q1J2A4 Dihydrouridine synthase, DuS n=3 Tax=Deinococcus RepID=Q1J2A4_DEIGD Length = 333 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 31/100 (31%), Gaps = 2/100 (2%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + R +++ Q + GA I ++ +G D + + +V VP+ Sbjct: 142 VSAKIRLGWDTDRSVEIAQGLAAAGAALITVHGRTSVQRYSGEADWDAIARVAASVKVPV 201 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + SG + E + V + L Sbjct: 202 VGSGDVKSAEQARARL-NTGVAAVMIGRGAVGNPWLFRAL 240 Score = 76.8 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 4/100 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K V +A+ A GA + + T+ D ++RVA + +P Sbjct: 145 KIRLGW---DTDRSVEIAQGLAAAGAALITVHGRTSVQRYSGEADWDAIARVAASVKVPV 201 Query: 78 CVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 +G +KS E A L+ G + I A+ +P L LA Sbjct: 202 VGSGDVKSAEQARARLNTGVAAVMIGRGAVGNPWLFRALA 241 >UniRef50_A4HAN2 Putative uncharacterized protein n=3 Tax=Leishmania RepID=A4HAN2_LEIBR Length = 512 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 55/180 (30%), Gaps = 22/180 (12%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC------------------- 124 +AA +L D I +N + + Q Sbjct: 182 TDAAEAALLLRPYCDAIDLNCGCPQRWAMKDGIGAVLLDQPERVADMVRSIRNAMPDGNT 241 Query: 125 --IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ- 181 ++V I + + R + ++D+ ++ + GA + ++ + Sbjct: 242 APMMVSIGGACSSCPATAPPFLPCVVKMRIKDDLRNSVDFARQCEAAGASWLTVHGRSAT 301 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 E +K +RE VP++ +GG + +EA G ++A+ Sbjct: 302 SQPSAAVQFEAVKLIRENLSVPVVLNGGVRDVSTAMEAALRTGCGGLMSANGLLDNPAMF 361 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 9/127 (7%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDI 75 VVK + + + V A++ GA L + +A S V V + E + + Sbjct: 266 VVKMR---IKDDLRNSVDFARQCEAAGASWLTVHGRSATSQPSAAVQFEAVKLIRENLSV 322 Query: 76 PFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLIT----RLADRFGVQCIVVGID 130 P + GG++ + A L G + + L +P + R A + + + Sbjct: 323 PVVLNGGVRDVSTAMEAALRTGCGGLMSANGLLDNPAMFYSGASRAAMEAELSFVASRCE 382 Query: 131 TWYDAET 137 Sbjct: 383 WSPQTCD 389 >UniRef50_A8ICF9 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8ICF9_CHLRE Length = 198 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 29/105 (27%), Gaps = 1/105 (0%) Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH 201 + V + + GA + ++ + D ++ +V Sbjct: 43 PVTVKIRLGENDKKIVVDTVVDYLHRAGAAAVTVHGRTAEQRYKKAADWAKVGEVARSTP 102 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 VP+I +G T ++ +A + E K Sbjct: 103 VPIIGNGDILTHYEAHARRTESGCTAVMAGRGALIKPWIFQEYKE 147 Score = 77.2 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 41/147 (27%), Gaps = 3/147 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK N + I + + GA + + TA + D + V VA +P Sbjct: 46 VKIRLGENDKKIV-VDTVVDYLHRAGAAAVTVHGRTAEQRYKKAADWAKVGEVARSTPVP 104 Query: 77 FCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G I + E A+ G + AL P + + Y Sbjct: 105 IIGNGDILTHYEAHARRTESGCTAVMAGRGALIKPWIFQEYKEGREWLPSTEERVGVYRL 164 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDW 162 + + R + + + Sbjct: 165 LVSYMKEHFGDDERGRRKAWYFFPWHF 191 >UniRef50_B0EC90 tRNA-dihydrouridine synthase, putative n=2 Tax=Entamoeba RepID=B0EC90_ENTDI Length = 340 Score = 84.5 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 55/172 (31%), Gaps = 8/172 (4%) Query: 71 EVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + I V G + AK L D I IN +G + Sbjct: 77 KERPIIIQVVGSDANEMARTAKFLQSYCDAIDINLGCPQKIAQ----KGNYGAYLALDFD 132 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN---QDGVRN 186 T VN + R + +T+ +V+ +Q+ G I ++ + + Sbjct: 133 HTKEIVNAVIEAVNIPVYCKVRVFEDEDKTMKFVEMLQECGIWGIAVHGRTINEKQSMNY 192 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + K++E +P+IA+G + E E + DG + Sbjct: 193 HARWNYIAKIKEQLKIPVIANGEMRSREKIEECKKVTHSDGYMIGFGLLMNP 244 Score = 63.3 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 4/97 (4%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDIT---ASSDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 E + + E G + + T S ++++++ E + IP G + Sbjct: 157 EDEDKTMKFVEMLQECGIWGIAVHGRTINEKQSMNYHARWNYIAKIKEQLKIPVIANGEM 216 Query: 84 KSLEDAAKILS-FGADKISINSPALADPTLITRLADR 119 +S E + +D I L +P + + D Sbjct: 217 RSREKIEECKKVTHSDGYMIGFGLLMNPGMCEGIIDN 253 >UniRef50_C5FBD9 tRNA-dihydrouridine synthase 1 n=1 Tax=Microsporum canis CBS 113480 RepID=C5FBD9_NANOT Length = 573 Score = 84.5 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 10/154 (6%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV-NQYTGDESRTRVT 155 D+ I +P + R A C D Y + + + R T Sbjct: 163 YDRPLIVQFCANNPDELLRAARHVEGYCDAEDPDLIYKLINKLHAELSIPVTAKFRILET 222 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVP----LIASG 208 + +TL++ + + GA + ++ ++ + + E ++ +R+ ++P + A+G Sbjct: 223 KEKTLEYAKMILSAGASILSVHGRRREQKGHNTGVANWEYIRYLRD--NLPPETVIFANG 280 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + DG ++A Sbjct: 281 NILNHGDIRDCLESTGADGVMSAEGNLSDPTIFS 314 Score = 71.0 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 8/99 (8%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIP-- 76 +FR E + AK GA L + G + ++ + + + P Sbjct: 216 KFRILETKEKTLEYAKMILSAGASILSVHGRRREQKGHNTGVANWEYIRYLRDNLP-PET 274 Query: 77 -FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLI 113 G I + D L GAD + L+DPT+ Sbjct: 275 VIFANGNILNHGDIRDCLESTGADGVMSAEGNLSDPTIF 313 >UniRef50_A2SJ37 HisA/HisF family protein, putative n=3 Tax=Burkholderiales RepID=A2SJ37_METPP Length = 273 Score = 84.1 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 85/249 (34%), Gaps = 31/249 (12%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGA-DELVFYDIT 53 IIP +D+ DGQVV+ V+ D +A+R E A D L D+ Sbjct: 1 MHIIPVIDLLDGQVVRAVRGERRHYRAIASALCGSADPRIVARRLCEHCATDTLYLADLN 60 Query: 54 ASSDGRVVDKSWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + GR W+ + + D+ + G +DAA +L A +PT Sbjct: 61 -ALQGRPPQLEWLRTLLQDRPDLALWLDAGFSGPDDAAHLL------------ARLEPTA 107 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 R+ +G + + +T + + + Sbjct: 108 AARVTPVYGSESL-RSRETLAACFAPPSRALLSLDHRQGAPLDPAGVWELPAQ----WPR 162 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +++ +++ G G DL+ L V H LI +GG L A + A L A Sbjct: 163 RLIVMTLSRVGSDGGPDLDTLAAVRARAPHAQLIGAGGVRDAA-DLAAAQAAGAHAWLVA 221 Query: 232 SVFHKQIIN 240 S H + Sbjct: 222 SALHDGRLP 230 >UniRef50_A3ZZD2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase related protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZD2_9PLAN Length = 244 Score = 84.1 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 80/261 (30%), Gaps = 43/261 (16%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKR------YAEEGADE 46 + I+P +D++D VV+GV +A + + Sbjct: 1 MPPVILPVIDLKDRHVVRGVGGLRRRYRPIESKLCASSKPGDVAAAMVTAYSFEDA---- 56 Query: 47 LVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS----FGADKISI 102 D+ A DGR + W ++AE + + G+ +L D +++ + + Sbjct: 57 -YVADLDAILDGRPQVEDW-RKIAEA-GLRLHLDAGLATLADCQRVIEVLARENVASVIV 113 Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 L + ++A F + + ++ G R + Sbjct: 114 GLETLRRWEDLEQIAAEF--------------GDDVTFSLDLRHGRPLRIVGAAIRPEEV 159 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL--KKVREVCHVPLIASGGAGTMEHFLEAF 220 Q + G IVL + G G E L + ++ V I GG T Sbjct: 160 AQRAFECGVRRIVLLDLAHIGQGRGTGTEMLCRELSTQLAGVEWITGGGMQTSADIAAQL 219 Query: 221 RDADVDGALAASVFHKQIINI 241 L +S H+ + Sbjct: 220 -AIGASRVLVSSALHEDEKIL 239 >UniRef50_O74553 tRNA-dihydrouridine synthase 4 n=1 Tax=Schizosaccharomyces pombe RepID=DUS4_SCHPO Length = 326 Score = 83.8 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 10/171 (5%) Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +D P LE AA+++ D I IN + + + V Sbjct: 82 VDDPVI-------LEKAAQLVGPYVDGIGINCGCPQTWAIQEGIGSALLDEPEKVHKLVR 134 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLE 191 T + +T +Q ++K GA I ++ + + +L+ Sbjct: 135 AVKSTLGESFCTEVKIRIAKDLN--KTRHLMQVIEKSGADIITVHGRTRQDRSSFPVNLD 192 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +++VR +P++A+G ++ LE + + G ++A + Sbjct: 193 AIREVRPCVQIPVVANGDVKSLRKGLEIAKYTETQGIMSARGLLENPALFA 243 Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 44/162 (27%), Gaps = 14/162 (8%) Query: 16 QVVKGVQF---------RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSW 65 + VK R + + L + + GAD + + T V+ Sbjct: 134 RAVKSTLGESFCTEVKIRIAKDLNKTRHLMQVIEKSGADIITVHGRTRQDRSSFPVNLDA 193 Query: 66 VSRVAEVIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 + V + IP G +KSL I L +P L Sbjct: 194 IREVRPCVQIPVVANGDVKSLRKGLEIAKYTETQGIMSARGLLENPALF--AGYEETPWG 251 Query: 125 IVVGIDTWYDAET-GKYHVNQYTGDESRTRVTQWETLDWVQE 165 V + + + + + T+ E + ++ Sbjct: 252 CVERFLWYSTSYSLNFHLFYHHLTTMMGQMTTKRERMTIPKD 293 >UniRef50_C8PLW3 Putative dihydrouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PLW3_9SPIO Length = 347 Score = 83.8 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 45/183 (24%), Gaps = 12/183 (6%) Query: 67 SRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + + + G G+ L+ G I ++ L + Sbjct: 69 EAFVQAVPLVLQQGGIGVD--------LNMGCSAPPIVRTGAGAAWMLKPLNETAEAVRS 120 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 V A L + + + G I ++ Q Sbjct: 121 V-KQALDVYAAAQSRSFRLSVKLRIGAAADYAYLLRFCTMLVEEGVQLITIHPRLQRQSY 179 Query: 186 NGYDL-EQLKKVREVCHVPLIASGGAGTMEHFL-EAFRDADVDGALAASVFHKQIINIGE 243 L E + + +P+ +G + E A R G + ++ E Sbjct: 180 ARPALHEYTAALAKDLPIPVYGNGDIDSAEKLQTAAARYPACTGWMIGRAAVQKPWIFKE 239 Query: 244 LKA 246 ++ Sbjct: 240 IRK 242 Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 4/102 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVIDIP 76 VK + ++ EEG + + S R + + +A+ + IP Sbjct: 140 VKLRIGAAADYAY-LLRFCTMLVEEGVQLITIHPRLQRQSYARPALHEYTAALAKDLPIP 198 Query: 77 FCVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRL 116 G I S E + I A+ P + + Sbjct: 199 VYGNGDIDSAEKLQTAAARYPACTGWMIGRAAVQKPWIFKEI 240 >UniRef50_B1ZZ77 Dihydrouridine synthase DuS n=2 Tax=Opitutaceae RepID=B1ZZ77_OPITP Length = 384 Score = 83.4 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 13/162 (8%), Positives = 42/162 (25%), Gaps = 3/162 (1%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A ++ I +N A P + + ++ + Sbjct: 91 ARELQQHPIAGIDLNLGCPA-PKVYKKNVGGGLLRDLAHVDRILGALRAATPGGLFTVKM 149 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCHVPLIAS 207 T + V + ++ ++ R+ + + + + P++A+ Sbjct: 150 RIGFDDTT-PFEPMLDLVNAHRVDLLSVHGRTVKEMYRSRVHYDFIARAVQRVRCPVLAN 208 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G + + R+ G + + + + Sbjct: 209 GNVTSAPRAVAILRETGAAGVMIGRHAIRNPWIFRQCRELFH 250 Score = 74.1 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 4/109 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIP 76 VK + + + D L + T V +++R + + P Sbjct: 147 VKMRIGFDDTTPFEP--MLDLVNAHRVDLLSVHGRTVKEMYRSRVHYDFIARAVQRVRCP 204 Query: 77 FCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 G + S A + GA + I A+ +P + + + F Sbjct: 205 VLANGNVTSAPRAVAILRETGAAGVMIGRHAIRNPWIFRQCRELFHPPP 253 >UniRef50_B7GE60 Predicted protein n=11 Tax=cellular organisms RepID=B7GE60_PHATR Length = 279 Score = 83.4 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 86/283 (30%), Gaps = 45/283 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG-------------------------DIV-PLAK 37 + PC+D+ GQ VK + A+ Sbjct: 1 MKFRPCIDLHHGQ-VKQIVGSTLRFTSPTTDHDDDTVTASSVPELATNFATERPAREFAE 59 Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA 97 RYA +G + + V GG+ +A + L GA Sbjct: 60 RYARDGLTGGHVILL------GPGNADAARAALRAAPGTLQVGGGVHDA-NAREWLDAGA 112 Query: 98 DKISINSPALAD----PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + + S ++ + RL G + +V+ + + ++ + Sbjct: 113 SHVIVTSHVFSNGQIAMDRLERLVQLIGKERLVLDLSCRKRPDDHNNGPYYVVTNQWQVF 172 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 T + ++ + E +++ ++ +G++ G L+ L + VP+ +GG ++ Sbjct: 173 TEYAVTTESLRTLAAY-CDEFLVHGVDVEGLQCGI-LDDLVTLLATSPVPVTYAGGVRSI 230 Query: 214 EHFLEA--FRDADVDGALAASVF--HKQIINIGELKAYLATQG 252 + VD S + ++ A+ + Sbjct: 231 DDLNRVEQLGQGKVD-CTVGSALDIFGGSLPYADVVAWHHQRN 272 >UniRef50_B1GZV7 Putative tRNA-dihydrouridine synthase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZV7_UNCTG Length = 320 Score = 83.4 bits (205), Expect = 7e-15, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 48/168 (28%), Gaps = 3/168 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A + + GAD I +N + + ++ V Sbjct: 83 AEAAKIVRNSGADIIDVNLGCPVKKVAKAGAGAKLLADE--KLVSEILESVVKSVDVPVT 140 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + + ++ G + ++ +G DL+ +P+ Sbjct: 141 VKIRTGLLPEHNAATEIIKVAYNCGIKMVAVHARPASQGHSGFPDLKLFAASCAGAKIPV 200 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 IA+GG + + R + G + L+A+ ++ Sbjct: 201 IANGGVVDEKTAADFLRVPNCAGIMIGRGALGNYSIFKRLEAFFSSGK 248 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 30/101 (29%), Gaps = 3/101 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK E + K G + + AS D + IP Sbjct: 141 VKIRTGLLPE-HNAATEIIKVAYNCGIKMVAVHARPASQGHSGFPDLKLFAASCAGAKIP 199 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRL 116 GG+ + AA L I I AL + ++ RL Sbjct: 200 VIANGGVVDEKTAADFLRVPNCAGIMIGRGALGNYSIFKRL 240 >UniRef50_Q4FQ57 Possible tRNA-dihydrouridine synthase n=24 Tax=Gammaproteobacteria RepID=Q4FQ57_PSYA2 Length = 350 Score = 83.0 bits (204), Expect = 8e-15, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 48/167 (28%), Gaps = 3/167 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+AA GA I IN A R + V+ + ++ Sbjct: 113 AENAAHACELGAPAIDINFGCPAKTVNSHRGGSVLLDEPEVMYDIISAVRQAVPANIPVS 172 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 T D + GA + ++ + ++++ +P+ Sbjct: 173 AKIRLGYTDTSR-MDDIRGAIAASGADWLTIHARTKTQGYKPPAYWDKIQAF-NSLKIPV 230 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 IA+G EH + + + I ++ L ++ Sbjct: 231 IANGEIWNSEHAQNCMAQSGTTHLMLGRGAVTRPDLIAQVDCGLDSE 277 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 5/105 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K D + A A GAD L + T + + + IP Sbjct: 174 KIRLGYTDTSRMDDIRGA--IAASGADWLTIHARTKTQGYKPPAYWDKIQAF-NSLKIPV 230 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFG 121 G I + E A + G + + A+ P LI ++ Sbjct: 231 IANGEIWNSEHAQNCMAQSGTTHLMLGRGAVTRPDLIAQVDCGLD 275 >UniRef50_O83945 Probable tRNA-dihydrouridine synthase n=4 Tax=Treponema RepID=DUS_TREPA Length = 340 Score = 83.0 bits (204), Expect = 8e-15, Method: Composition-based stats. Identities = 21/198 (10%), Positives = 44/198 (22%), Gaps = 15/198 (7%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD-----KISINSPALADPTLITRLAD 118 + R + + G + A+ D I IN+ T Sbjct: 65 RLIRRASNETHYAIQIFG--SNPAVMAETAKLIVDSAQPSCIDINAGCPMPKITKTGAGA 122 Query: 119 RFGVQCIVVGIDTWYDA---ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + + A + + + + GA + Sbjct: 123 ALTREPTRLYEVVKAVADAVYAQDARIPVTVKIRAGWEEAHLTWKEAARAAVDAGAQALA 182 Query: 176 LNMMNQDGVRNG-YDLEQLKKVREVCH----VPLIASGGAGTMEHFLEAFRDADVDGALA 230 L+ G + + + + + VP+ SG E G + Sbjct: 183 LHPRTCAQCYAGEANWDIIADLVQCARGWGEVPVFGSGDLHAPEDARAMLEHTACAGVMF 242 Query: 231 ASVFHKQIINIGELKAYL 248 A + + L Sbjct: 243 ARGAMGNPFIFRQTRQLL 260 Score = 51.0 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 28/77 (36%), Gaps = 6/77 (7%) Query: 45 DELVFYDITASS-DGRVVDKSWVSRVAEVI----DIPFCVAGGIKSLEDAAKILS-FGAD 98 L + T + + ++ + + ++P +G + + EDA +L Sbjct: 179 QALALHPRTCAQCYAGEANWDIIADLVQCARGWGEVPVFGSGDLHAPEDARAMLEHTACA 238 Query: 99 KISINSPALADPTLITR 115 + A+ +P + + Sbjct: 239 GVMFARGAMGNPFIFRQ 255 >UniRef50_C8X0F5 Dihydrouridine synthase DuS n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0F5_DESRD Length = 341 Score = 83.0 bits (204), Expect = 9e-15, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 39/159 (24%), Gaps = 3/159 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 A +I G + IN + DA + + Sbjct: 94 AAAARRIQDEGFFGVDINMGCCVAAVRQQGAGAALLRD--ISRAAAIVDAVRQAVDIPLF 151 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPL 204 S + + K GA ++++ D ++ V E +P+ Sbjct: 152 VKLRSGWTDQGPVVVHAARACAKAGADALIVHPRLAPDRRTRPPQWRDIRAVCEAVDLPV 211 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +G T + R G + + E Sbjct: 212 FGNGNVFTADDATAMLRQTGCQGIALGRMAAARPWIAAE 250 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 16/195 (8%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVS 67 +D+ VK + +V A+ A+ GAD L+ + A R + Sbjct: 145 AVDIP--LFVKLRSGWTDQGPV-VVHAARACAKAGADALIVHPRLAPDRRTRPPQWRDIR 201 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIV 126 V E +D+P G + + +DA +L G I++ A A P + F Sbjct: 202 AVCEAVDLPVFGNGNVFTADDATAMLRQTGCQGIALGRMAAARPWIAAEWLGHFHPAPET 261 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 E + + + ++ + + D R+ Sbjct: 262 YPKVAQRMVELLWTSFPEGQALRLYRKFMNYFAANFAFG-----------HRLRSDLTRS 310 Query: 187 GYDLEQLKKVREVCH 201 + K++ Sbjct: 311 ATPEDLYKEIAHHLT 325 >UniRef50_C7NBC4 Dihydrouridine synthase DuS n=3 Tax=Leptotrichia RepID=C7NBC4_LEPBD Length = 325 Score = 83.0 bits (204), Expect = 9e-15, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 55/181 (30%), Gaps = 9/181 (4%) Query: 78 CVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRLADRF-GVQCIVVGIDTWYDA 135 G L K+ +FG KI+IN + +V + Sbjct: 62 IFGGDKNELVSGILKLKNFGFRKININMGCPQPKIVKNGAGSALLENYELVEQVLLETQN 121 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 K + G + ++ K I ++ Q + +G + E ++ Sbjct: 122 IDAKISIKIRVGYK-----DFDNPEIFLNLANKHNLDFICVHGRTQKQMYSGTANWEIVE 176 Query: 195 KVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 K+ ++ ++ +G ++DG + + I + + +L T + Sbjct: 177 KLSKMPRNINFFGNGDLFEPSEIKRKIASCNLDGIILSRGIIGNPWLISQTREFLKTGKI 236 Query: 254 E 254 Sbjct: 237 N 237 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/107 (11%), Positives = 37/107 (34%), Gaps = 5/107 (4%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 + +K ++ + + D + + T + V +++ Sbjct: 122 IDAKISIKIRVG--YKDFDNPEIFLNLANKHNLDFICVHGRTQKQMYSGTANWEIVEKLS 179 Query: 71 E-VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITR 115 + +I F G + + + ++ D I ++ + +P LI++ Sbjct: 180 KMPRNINFFGNGDLFEPSEIKRKIASCNLDGIILSRGIIGNPWLISQ 226 >UniRef50_Q88LF2 tRNA-dihydrouridine synthase C n=38 Tax=cellular organisms RepID=DUSC_PSEPK Length = 323 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 63/188 (33%), Gaps = 4/188 (2%) Query: 67 SRVAEVIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 +R A + + + G + E+AA GA I +N A +R + Sbjct: 57 ARTAAGVPMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEP 116 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 ++ ++ + + L+ + + G+ +V++ + Sbjct: 117 ELLHAIVREVRRAVPANIPVTSKMRLGFD-SPDGALECATALAEGGSAHLVVHARTKVEG 175 Query: 185 RNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 E + +V++V VP+ A+G T++ + + + + + + Sbjct: 176 YKPPAHWEWVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDLGLQ 235 Query: 244 LKAYLATQ 251 + A + Sbjct: 236 IAAARDGR 243 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 52/162 (32%), Gaps = 13/162 (8%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPF 77 K + + A AE G+ LV + T WV+RV +V+ +P Sbjct: 139 KMRLGFDSPDG--ALECATALAEGGSAHLVVHARTKVEGYKPPAHWEWVARVQDVVKVPV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA---------DRFGVQCIVV 127 G I +++D + GA+ I + ++ P L ++A + + Sbjct: 197 FANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDLGLQIAAARDGRDYQPMSWHDLLPL 256 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + W A+ + + + V + Sbjct: 257 LREFWRQAQAKLSPRYAPGRMKQWLAMLTRSYPEAVVLFAEL 298 >UniRef50_C4QAZ6 tRNA-dihydrouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4QAZ6_SCHMA Length = 492 Score = 83.0 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 46/163 (28%), Gaps = 9/163 (5%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + AAK+L I +N ++ + + +V Sbjct: 77 TALQAAKMLENDVMGIDVNMGCPKAYSIKGGMGAALLTKPEIVKEILTTLTTNL----RI 132 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVP 203 + R +T+ + ++ G I ++ + + E ++ + +P Sbjct: 133 PVTCKIRILPELEKTIALAKLIESTGVAAITVHGRTINERPVHRNRNEVIQTIANSVGIP 192 Query: 204 LIASGG----AGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 ++A+GG E + G + A Sbjct: 193 VLANGGSHDIIRNHEDIEYFRQLTSAAGVVIARAAMSNPAIFK 235 Score = 65.6 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 10/94 (10%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK---SWVSRVAEVIDIPFCVAGG--- 82 + + LAK G + + T + R V + + +A + IP GG Sbjct: 144 LEKTIALAKLIESTGVAAITVHGRT--INERPVHRNRNEVIQTIANSVGIPVLANGGSHD 201 Query: 83 -IKSLEDAAKILS-FGADKISINSPALADPTLIT 114 I++ ED A + I A+++P + Sbjct: 202 IIRNHEDIEYFRQLTSAAGVVIARAAMSNPAIFK 235 >UniRef50_B5IUS4 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Thermococcus barophilus MP RepID=B5IUS4_9EURY Length = 253 Score = 82.6 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 71/230 (30%), Gaps = 16/230 (6%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA---- 80 + + +A+ E G D ++ T + V V + E +P + Sbjct: 29 DDVSPEEASKIAQMCEEVGVDAVMVGGSTGAE--GEVLDEVVKAIKESSSLPVILFPGSH 86 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 GGI DA +S +NS T L + + I Y Sbjct: 87 GGITKYADAIFFMSL------LNSRNPFFITGAQALGAFTVKRYRIEPIPMAYLIIEPGE 140 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC 200 V + R + Q G + L G + ++ V+ V Sbjct: 141 TVGWVGDAKPIPRHKPKIAAAYALAGQYLGMRLVYLEA--GSGAPEHVPNDMIRAVKSVI 198 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 VPLI GG T E E + D + + ++ ++ E + L + Sbjct: 199 DVPLIVGGGIRTYEDAREV-AQSGADIIVTGTAI-EKAGSLEEARKRLES 246 >UniRef50_Q10184 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=71 Tax=cellular organisms RepID=HIS4_SCHPO Length = 264 Score = 82.6 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 85/255 (33%), Gaps = 23/255 (9%) Query: 8 PCLDVRDGQV---VKGVQFRNHEIIGDIVPL------AKRYAEEGADELVFYDITASSDG 58 PC+D+ GQV V G + ++ + V L A+ Y + + Sbjct: 11 PCIDIHQGQVKQIVGGTLGNDADVKTNYVSLKPSSYYAELYKLNHLEGAHVIML------ 64 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + GGI ++ +A L GA K+ + S P L Sbjct: 65 GPNCEEAAKTALHTWPGALQIGGGI-NISNAQNWLQEGASKVIVTSWLF--PDAQFDLDR 121 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + + D + + +T +E + ++ + E +++ Sbjct: 122 LKAISSKIGKDRLVVDVSCRRKDNRWFAAINKWQVMTAFELNEENLDLLSQYCSEFLIHA 181 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTME--HFLEAFRDADVDGALAASVF-- 234 + +G+ G D + + K+ E +P +GG ++E ++ VD S Sbjct: 182 ADVEGLCKGIDEDLVIKLGEWVKIPTTYAGGGRSIEDLDLVDKLSKGKVD-LTIGSALDI 240 Query: 235 HKQIINIGELKAYLA 249 ++ + A+ Sbjct: 241 FGGVLEFTRVVAWNR 255 >UniRef50_UPI00015B6197 PREDICTED: similar to CG10463-PA n=1 Tax=Nasonia vitripennis RepID=UPI00015B6197 Length = 584 Score = 82.2 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 66/209 (31%), Gaps = 14/209 (6%) Query: 37 KRYAEEGAD----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDA 89 + E GAD E+ G + + V R +AG G+ + Sbjct: 307 RICKEFGADITCGEMALAPR--LLKGVREEWALVKRHESEDLFGVQIAGNNPGVLTRCCQ 364 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 D + +N D L+ + G+ + +++ + T + Sbjct: 365 LLNDETEVDFVDLNVGCPID--LVYKQGGGCGMLNRLNILESVVKSATEVLDIPFTVKTR 422 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIAS 207 + + + + + GA I ++ +++ D + ++K + +P+ + Sbjct: 423 TGVYADKPIAHKLMSKFKDWGASMINIHGRSREQRYTKLADWDYIEKCAQVASPIPVYGT 482 Query: 208 GGAGTMEHFLEAFR-DADVDGALAASVFH 235 G + + + + V G A Sbjct: 483 GDILSWDDYQRVRKTYPTVQGVSIARGAL 511 >UniRef50_A2DYY3 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DYY3_TRIVA Length = 313 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 46/147 (31%), Gaps = 7/147 (4%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 A I IN + ++ V + T + R + T Sbjct: 107 ASGIDINCGCPESFACHRGGGSKMQLESAVDVVKTLKMNS------PLPISVKMRVKDTV 160 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEH 215 E+L + + + GA I ++ R+G D E +K++ + + I +GG Sbjct: 161 EESLQFAKAMVDAGAVAITVHGRLAADKRHGSVDYEHMKEIFDNINCAKIGNGGICNKAD 220 Query: 216 FLEAFRDADVDGALAASVFHKQIINIG 242 E D + A+ K Sbjct: 221 AAEMRVKTGCDSIMIATAALKNPSVFS 247 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 2/96 (2%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFC 78 V+ R + + + + AK + GA + + A+ VD + + + I+ Sbjct: 151 SVKMRVKDTVEESLQFAKAMVDAGAVAITVHGRLAADKRHGSVDYEHMKEIFDNINCAKI 210 Query: 79 VAGGIKSLEDAAKI-LSFGADKISINSPALADPTLI 113 GGI + DAA++ + G D I I + AL +P++ Sbjct: 211 GNGGICNKADAAEMRVKTGCDSIMIATAALKNPSVF 246 >UniRef50_D1Z6W7 Whole genome shotgun sequence assembly, scaffold_7 n=1 Tax=Sordaria macrospora RepID=D1Z6W7_SORMA Length = 614 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 57/175 (32%), Gaps = 16/175 (9%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AAK+++ D + +N + +G + T ++ Sbjct: 152 AAKLVAPYCDAVDLNLGCPQGIAKRGQ----YGSFLQENQELIFELINTLHKELDIPVTA 207 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVP-- 203 + R T+ TL + Q V + GA + ++ ++ + + E ++ +RE Sbjct: 208 KIRILETKEATLKYAQNVLRAGASILTVHGRRREQKGHQTGLANWEYIRYLRENLPKETV 267 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI-------GELKAYLATQ 251 + A+G + DG ++A E + Y ++ Sbjct: 268 IFANGNILQYSDLEKCLEATGADGVMSAEGNLSDPGLFAKPPAVGEEGREYWRSK 322 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 6/100 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVID--IP 76 + R E + A+ GA L + G + + ++ + E + Sbjct: 208 KIRILETKEATLKYAQNVLRAGASILTVHGRRREQKGHQTGLANWEYIRYLRENLPKETV 267 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITR 115 G I D K L GAD + L+DP L + Sbjct: 268 IFANGNILQYSDLEKCLEATGADGVMSAEGNLSDPGLFAK 307 >UniRef50_A2QA98 Similarity to hypothetical protein SPBC36B7.04 - Schizosaccharomyces pombe n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QA98_ASPNC Length = 466 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 55/163 (33%), Gaps = 13/163 (7%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +AA+ ++ D + +N +G + ++ Sbjct: 121 EAARHVAPYCDAVDLNLGCPQGIAKRGH----YGAFLQEDWDLIYRLINRLHNELSIPVT 176 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVP- 203 + R + T+ +TL++ + + GA I ++ ++ D ++ +R+ ++P Sbjct: 177 AKFRIQETKEKTLEYAKMILSAGANIITVHGRRREQKGHNTGLADWSYIRYLRD--NLPP 234 Query: 204 ---LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + A+G E + DG ++A + Sbjct: 235 ETVIFANGNNLNYEDLDRCLEETGADGVMSAEGNLSDPSIFSK 277 Score = 69.9 bits (170), Expect = 8e-11, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 8/101 (7%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIP-- 76 +FR E + AK GA+ + + G D S++ + + + P Sbjct: 178 KFRIQETKEKTLEYAKMILSAGANIITVHGRRREQKGHNTGLADWSYIRYLRDNLP-PET 236 Query: 77 -FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITR 115 G + ED + L GAD + L+DP++ ++ Sbjct: 237 VIFANGNNLNYEDLDRCLEETGADGVMSAEGNLSDPSIFSK 277 >UniRef50_Q9ZLB6 Probable tRNA-dihydrouridine synthase n=23 Tax=Epsilonproteobacteria RepID=DUS_HELPJ Length = 328 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 17/163 (10%), Positives = 46/163 (28%), Gaps = 6/163 (3%) Query: 87 EDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E KI + I N A P + ++ + ++ Sbjct: 78 EAVEKINALDHVSGIDFNCGCPA-PKVANHGNGSGLLKDLNHLVEILKVIRENTNKKITS 136 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREVCHVP 203 + + +V++ + D E + ++++ P Sbjct: 137 VKVRLGFEKKI--PKEIAHALNDAPVDYVVVHGRTRSDRYQKDKIDYESIALMKKILKKP 194 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +IA+G +++ E + DG + + +++ Sbjct: 195 VIANGEIDSVKKAFEVLQITQADGLMIGRATLRAPWIFWQIRN 237 Score = 79.5 bits (195), Expect = 9e-14, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 6/136 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR--VVDKSWVSRVAEVIDI 75 VK +I +A + D +V + T S + +D ++ + +++ Sbjct: 137 VKVRLGFEKKI---PKEIAHALNDAPVDYVVVHGRTRSDRYQKDKIDYESIALMKKILKK 193 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P G I S++ A ++L AD + I L P + ++ + VV D + Sbjct: 194 PVIANGEIDSVKKAFEVLQITQADGLMIGRATLRAPWIFWQIRNNTTELPAVVKKDLVLE 253 Query: 135 AETGKYHVNQYTGDES 150 G Sbjct: 254 HFDKMVEFYGDRGVIM 269 >UniRef50_Q9HGN6 tRNA-dihydrouridine synthase 1 n=1 Tax=Schizosaccharomyces pombe RepID=DUS1_SCHPO Length = 399 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 57/183 (31%), Gaps = 14/183 (7%) Query: 67 SRVAEVIDIPFCVAGGIKSLE---DAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + E + G E AAKI + D + +N ++G Sbjct: 69 RTIPEERPLIIQFCG--NDPEIMLKAAKIAAPYCDAVDVNLGCPQGIAK----KGKYGSF 122 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 ++ + R +TLD+ + + K GA + ++ ++ Sbjct: 123 LQENWNLIESIITKLHTELSIPVTAKIRIFPDPQKTLDYAKMILKAGASILAVHGRLREQ 182 Query: 184 VRNG---YDLEQLKKVREVCHVP--LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + D EQ++ +R+ L A+G + + VDG L+A Sbjct: 183 KGHFTGIADWEQIQMLRKNLPSETVLFANGNILHAQDIDRCIKYTGVDGVLSAEGSLYNP 242 Query: 239 INI 241 Sbjct: 243 RIF 245 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 29/92 (31%), Gaps = 6/92 (6%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVID--IPFCVAGG 82 + AK + GA L + G + D + + + + G Sbjct: 154 DPQKTLDYAKMILKAGASILAVHGRLREQKGHFTGIADWEQIQMLRKNLPSETVLFANGN 213 Query: 83 IKSLEDAAKILS-FGADKISINSPALADPTLI 113 I +D + + G D + +L +P + Sbjct: 214 ILHAQDIDRCIKYTGVDGVLSAEGSLYNPRIF 245 >UniRef50_Q08111 Probable tRNA-dihydrouridine synthase n=17 Tax=Alphaproteobacteria RepID=DUS_RHOCA Length = 324 Score = 81.8 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 9/170 (5%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW---YDAETGKYHV 142 E A + GA+ I IN A ++ ++ D +A G + Sbjct: 83 AEAAKIVADMGAEIIDINMGCPA-----KKVTGGLSGAALMRNPDHALRLIEAVVGAVDL 137 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH 201 Q + + G IV++ + G D + VR Sbjct: 138 PVTLKMRLGWDEDQLNAAEIAARAEAAGVKMIVIHGRTRMQFYTGAADWRAIAAVRAAVS 197 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 VP++A+G A + G + + ++ A L + Sbjct: 198 VPVVANGDITDAASARRALDQSGAAGVMVGRGAQGAPWRLAQIAAALFGK 247 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 5/114 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKS 64 ++ +D+ +K + + + + +A R G +V + T D Sbjct: 131 VVGAVDLP--VTLKMRLGWDEDQL-NAAEIAARAEAAGVKMIVIHGRTRMQFYTGAADWR 187 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA 117 ++ V + +P G I A + L GA + + A P + ++A Sbjct: 188 AIAAVRAAVSVPVVANGDITDAASARRALDQSGAAGVMVGRGAQGAPWRLAQIA 241 >UniRef50_C1ZC07 HisA/hisF family protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZC07_PLALI Length = 296 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 80/285 (28%), Gaps = 65/285 (22%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAE-EGADELVFYDITAS 55 ++P +D R+G V + LA+ ++ L D+ Sbjct: 23 VVPVIDTRNGWAVHAIAGNRALYRPWTDSFQQPRKPQQLAEEFSRVWQPRWLYVADLDGI 82 Query: 56 SDGRV--VDKSWVSRVAEVIDIP-FCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 DG+ + D P + G + ++D ++ G + + + + +L Sbjct: 83 IDGQPQTSSWPCLP-----GDGPRILMDAGFREIDDVLTAVNLGYE-VILGTESLPSMAW 136 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + L R + + + ++ Q D++ ++ Sbjct: 137 LQELIVRLEDSQRLWISLDFRQGQ-----------WQAPAEFQQLGLTDFISQLSNWSMT 185 Query: 173 EIVLNMMNQDGVRNGYDL--------EQLKKVREVCHVP--------------------- 203 ++ + G G E L+K P Sbjct: 186 HWIVLDLADVGQGTGGSTAEQIRLLRETLEKSSRNWKHPAESYQSRLAQSCQHGTQVVPT 245 Query: 204 -----LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 ++A GG T + L+ + V G L A+ I + Sbjct: 246 ERTPTILAGGGMRTAQDVLQ-LQTQGVSGVLVATALMTGTITPDQ 289 >UniRef50_B8C389 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C389_THAPS Length = 615 Score = 81.4 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 11/166 (6%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 AAK++ D I +N I Q + + A + + Sbjct: 159 DFAKAAKLVEKYCDAIDLNLGCPQRTAFIGHFGSYLLGQKDRKLVLSIVRAGSKAVSIPI 218 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD-------GVRNGYDL-EQLKKV 196 + T ET E++ GA I ++ + G R+G L +Q+ V Sbjct: 219 FVKIR--LLDTVEETTKLCHELRDAGASLIAIHARYRATWERTGPGARDGPALLDQVAVV 276 Query: 197 REV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 ++ P+IA+G T + + + DG ++A Sbjct: 277 KQSMPDFPIIANGNVITYDDVISNKQSTGADGIMSAEGILDNPALF 322 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 13/106 (12%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS--------SDGRVVDKSWVSRV 69 VK + + L + GA + + + + V+ V Sbjct: 220 VKIRLLD---TVEETTKLCHELRDAGASLIAIHARYRATWERTGPGARDGPALLDQVAVV 276 Query: 70 AEVI-DIPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLI 113 + + D P G + + +D S GAD I L +P L Sbjct: 277 KQSMPDFPIIANGNVITYDDVISNKQSTGADGIMSAEGILDNPALF 322 >UniRef50_A7HK00 Dihydrouridine synthase DuS n=8 Tax=Thermotogaceae RepID=A7HK00_FERNB Length = 322 Score = 81.1 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 45/184 (24%), Gaps = 31/184 (16%) Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + S + + + + + G +K++ GA S L D ++ Sbjct: 76 AELSEAAAIVQEKGLWVDLNAG----CPVSKVIKKGA-----GSALLKDLGEFRKVVRAM 126 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 E + + + ++ Sbjct: 127 RSVL-----------------KRFTVKTRIGWEKD--EFEKIYNILLEENVDAVFVHGRT 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + +G + K+ VPL SG T E A + G + A Sbjct: 168 AKQMYSG---KATWKIYNPGFVPLYISGDIYTKEDIKNAMEQSGATGVIVARGSIGNPWI 224 Query: 241 IGEL 244 E+ Sbjct: 225 FSEI 228 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 44/154 (28%), Gaps = 9/154 (5%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPF 77 VK + I + E D + + TA ++ +P Sbjct: 135 VKTRIGWEKDEFEKIYNI--LLEEN-VDAVFVHGRTAKQMYSG---KATWKIYNPGFVPL 188 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 ++G I + ED + GA + + ++ +P + + + + Q + + Sbjct: 189 YISGDIYTKEDIKNAMEQSGATGVIVARGSIGNPWIFSEIGEPNCEQRLCTILKHLEYLY 248 Query: 137 TGKYHVNQYTGDES--RTRVTQWETLDWVQEVQK 168 + D+ +V K Sbjct: 249 DEYKDYGAVVFRKFVAGYTKNMLGARDFRDKVMK 282 >UniRef50_A7EMF2 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A7EMF2_SCLS1 Length = 342 Score = 81.1 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 58/172 (33%), Gaps = 7/172 (4%) Query: 78 CVAGGIKSLEDAAK---ILSFGADKISINSPALADPTLITRLADRFGVQC---IVVGIDT 131 G+ S + ++ +++ + I IN + + + + Sbjct: 88 IAQFGVCSPLEISRSTTLIAPYINGIDINCGCPQSWACACSIGAALMHKRELVAEMVKEA 147 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DL 190 + Y + + R +T+D+++ VQ G I ++ + + +L Sbjct: 148 KSALKREGYEGKKTVSVKIRIHRDLRDTVDFIKTVQDAGVDFITIHGRMRSTPSSHPVNL 207 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 E +K + VP +++G ++ E + V G ++A Sbjct: 208 EAIKLLNTHTTVPTVSNGDITSLRSAHEHTQQTSVSGVMSARGLLSNPALFA 259 Score = 73.4 bits (179), Expect = 7e-12, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 8/171 (4%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAE 71 +G+ V+ R H + D V K + G D + + S+ V+ + + Sbjct: 156 YEGKKTVSVKIRIHRDLRDTVDFIKTVQDAGVDFITIHGRMRSTPSSHPVNLEAIKLLNT 215 Query: 72 VIDIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQ------C 124 +P G I SL A + L++P L C Sbjct: 216 HTTVPTVSNGDITSLRSAHEHTQQTSVSGVMSARGLLSNPALFAGYVSTPWECVDVFLNC 275 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 +V + + GD + + ++ ++ R E++ Sbjct: 276 VVRQPIPFKLVVHHLSEMCGSVGDGGNAGKSLLNKEERMRLMECRDMIEVI 326 >UniRef50_D0J1P6 Dihydrouridine synthase, DuS n=7 Tax=cellular organisms RepID=D0J1P6_COMTE Length = 347 Score = 81.1 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 2/157 (1%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + E+AA + G + I +N A + + Sbjct: 75 VSMAENAANLARLGPEGIDLNFGCPAKVVNRHGGGASLLQDPEQIVRVVDAVRRAVPAQM 134 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ-DGVRNGYDLEQLKKVREVCH 201 T + Q +++ GA EIV++ + DG R E++ ++RE Sbjct: 135 PVSAKMRLGFNDRALMT-ECAQAMEQGGACEIVVHARTKLDGYRPPAYWEEIPRIREAVG 193 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 V ++A+G T+E L + D + Sbjct: 194 VNVVANGEIWTVEEALRCREVSGCDDLMLGRGIVADP 230 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 4/133 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K N + + A+ + GA E+V + T R + R+ E + + Sbjct: 139 KMRLGFNDRAL--MTECAQAMEQGGACEIVVHARTKLDGYRPPAYWEEIPRIREAVGVNV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I ++E+A + G D + + +ADP L + + + A Sbjct: 197 VANGEIWTVEEALRCREVSGCDDLMLGRGIVADPGLALAVRRAVEHGSVSAVAGIDWLAL 256 Query: 137 TGKYHVNQYTGDE 149 + + E Sbjct: 257 VPQVQRFWHMVCE 269 >UniRef50_D0MWM4 tRNA-dihydrouridine synthase 3 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MWM4_PHYIN Length = 681 Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 26/259 (10%), Positives = 61/259 (23%), Gaps = 49/259 (18%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-LEDAAKIL 93 + + GAD T + + + + R +AG + ++L Sbjct: 306 RLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQLAGSFSDQMTRVCELL 365 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGID-----------TWYDAETGKY 140 D + IN D + + T Sbjct: 366 TRETDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGGIVN 425 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKR----------------------GAGEIVLNM 178 + Q + ++Q I ++ Sbjct: 426 TPGLTVKLRTGWSEKQPTAHKLIPKLQAVRASQAYVNSAVVTADFKLRATQSIDAITVHG 485 Query: 179 MNQDGVRN-GYDLEQLKKVREV----------CHVPLIASGGAGTMEHFLEAFRDADVDG 227 ++ D + + + + ++P + G + E F E ++ +D Sbjct: 486 RSRLQRYTKHADWDYIFQCSDAQKGSIDDKPLSNIPFVGGGDVLSYEEFDEHLQNGKLDT 545 Query: 228 ALAASVFHKQIINIGELKA 246 + A + E+K Sbjct: 546 CMLARGALIKPWLPTEIKE 564 >UniRef50_B6BT49 tRNA-dihydrouridine synthase A n=4 Tax=SAR11 cluster RepID=B6BT49_9RICK Length = 334 Score = 81.1 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 23/201 (11%), Positives = 60/201 (29%), Gaps = 19/201 (9%) Query: 71 EVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADP--TLITRLADRFGVQCIV 126 E + V G K E A G D+I+IN + + + Sbjct: 61 EEKPLALQVGGSNKDELAEVAKIAEDMGYDEININLGCPSKKVQKNMFGACLMKEPDLVA 120 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 I++ ++ G + +++ +++ G +L+ Sbjct: 121 ECINSMVNSCNIPVTAKTRIGFDQTEDFDYLN--NFIHKMRDAGTKTFILHARKAMLTGL 178 Query: 187 GY---------DLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + + ++++ + +I +GG + + DG + ++ Sbjct: 179 SPKQNLNIPKLNYNMVYEIKKKNPELEIIINGGISKVSEIDNHLKF--CDGVMIGRSIYQ 236 Query: 237 QIINIGEL-KAYLATQGVEIR 256 ++ E+ + T R Sbjct: 237 NPYSLIEIERDIFNTHNNPTR 257 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 34/109 (31%), Gaps = 12/109 (11%) Query: 19 KGVQFRNHEIIGDIVP-LAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSR 68 K + D + + + G + + A G ++ + V Sbjct: 137 KTRIGFDQTEDFDYLNNFIHKMRDAGTKTFILHARKAMLTGLSPKQNLNIPKLNYNMVYE 196 Query: 69 VAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + ++ + GGI + + L F D + I +P + + Sbjct: 197 IKKKNPELEIIINGGISKVSEIDNHLKF-CDGVMIGRSIYQNPYSLIEI 244 >UniRef50_A1AT39 Dihydrouridine synthase, DuS n=7 Tax=Desulfuromonadales RepID=A1AT39_PELPD Length = 342 Score = 80.7 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 40/158 (25%), Gaps = 4/158 (2%) Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 GA I++N + + + A Sbjct: 112 QAAQDAGAAHINLNMGCPYGRMTSGQTGGGMLRSP--QELSSIIPALRKTIRGTFSIKLR 169 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASG 208 S + D + + G +VL+ G D + + +P+IA+G Sbjct: 170 SGYD-NPRQIFDLLPLFEASGVDFLVLHPRTVLQKYAGFADHGITAEAVQRSTLPIIANG 228 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 ++ R+ G + + L+ Sbjct: 229 DIRSVATGRHVLRETGAAGLMLGRGAISDPLLFQRLRN 266 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 6/115 (5%) Query: 6 IIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VD 62 IIP L +R +K + I L + G D LV + T D Sbjct: 152 IIPALRKTIRGTFSIKLRSGYD--NPRQIFDLLPLFEASGVDFLVLHPRTVLQKYAGFAD 209 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 + + +P G I+S+ +L GA + + A++DP L RL Sbjct: 210 HGITAEAVQRSTLPIIANGDIRSVATGRHVLRETGAAGLMLGRGAISDPLLFQRL 264 >UniRef50_C5LCP2 tRNA-dihydrouridine synthase, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LCP2_9ALVE Length = 606 Score = 80.7 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 55/208 (26%), Gaps = 19/208 (9%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA------DKISINSPALAD 109 G + + + + + VAGG + ++ D + IN + Sbjct: 274 LKGNRAEHALLKKHPDEKIFGIQVAGGF--PDMMSRCAEMLCREMDDFDFLDINMGCPLE 331 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL--DWVQEVQ 167 L + A + + + ++ + RT + Sbjct: 332 G-LHKKGAGSALMTRLGKAEGVMSSMAKVCHAYDKNLTVKIRTAHYGQNHVYDKVAARAV 390 Query: 168 KRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH-------VPLIASGGAGTMEHFLEA 219 G +VL+ + D K R VPL+ G +E Sbjct: 391 SSGVDGVVLHGRTAQQRYSRPADWTFHTKCRTAMDSAVPGNAVPLVGCGDIIDWREAIER 450 Query: 220 FRDADVDGALAASVFHKQIINIGELKAY 247 V+G + + E+K + Sbjct: 451 METPGVEGLMIGRGALIKPWIFTEIKEH 478 Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 17/164 (10%) Query: 18 VKGVQ---FRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI 73 VK +NH +A R G D +V + TA R D ++ ++ + Sbjct: 369 VKIRTAHYGQNHVYD----KVAARAVSSGVDGVVLHGRTAQQRYSRPADWTFHTKCRTAM 424 Query: 74 D-------IPFCVAGGIKSL-EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 D +P G I E ++ + G + + I AL P + T + I Sbjct: 425 DSAVPGNAVPLVGCGDIIDWREAIERMETPGVEGLMIGRGALIKPWIFTEIK-EHRDWDI 483 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 Y + + D T+ L+ + + + Sbjct: 484 SSAERLELLKRFVSYGLTHWGTDTRGVESTRRFLLEALSFLYRY 527 >UniRef50_C8QWB5 Dihydrouridine synthase DuS n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QWB5_9DELT Length = 335 Score = 80.3 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 43/153 (28%), Gaps = 3/153 (1%) Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 GA I +N A P + + + + + + + Sbjct: 98 LGAAAIDLNLGCPA-PDIRRQ-GGGSRLMEEPQMVRRLVQETRRRTALPLSAKIRLGEEL 155 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQ-DGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 + ++ G + ++ + + E + KV+ +P++A+GG + Sbjct: 156 NAERLRAFCLLLEDAGVDLLTVHARLRGEPYGRKPRWEWVGKVKHWLRIPVVANGGIFSA 215 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + DG + +L Sbjct: 216 ADAAACLAASGADGLMIGRAAAATPWLFRQLAE 248 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 3/104 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVIDIPF 77 K + + G D L + GR WV +V + IP Sbjct: 148 KIRLGE-ELNAERLRAFCLLLEDAGVDLLTVHARLRGEPYGRKPRWEWVGKVKHWLRIPV 206 Query: 78 CVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRF 120 GGI S + AA + + GAD + I A A P L +LA+ + Sbjct: 207 VANGGIFSAADAAACLAASGADGLMIGRAAAATPWLFRQLAEGW 250 >UniRef50_A6RVN2 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6RVN2_BOTFB Length = 1174 Score = 80.3 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 8/137 (5%) Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVN---QYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + + DTW E + R T+ +TLD+ + V GA Sbjct: 763 IKRNATFSPRIQFHDTWPSQELINTLHKELDVPVTAKIRILDTREKTLDYAKMVISAGAS 822 Query: 173 EIVLNMMNQD--GVRNG-YDLEQLKKVREVCHVPLI--ASGGAGTMEHFLEAFRDADVDG 227 + ++ ++ G + G + E L+ +RE ++ +G E + + DG Sbjct: 823 ILTVHGRTREMKGHKTGLANWEMLRFLRESLPKEVVLFVNGNILAREDIDDCLKATGADG 882 Query: 228 ALAASVFHKQIINIGEL 244 ++A + Sbjct: 883 VMSAEGNLYDPTIFSDA 899 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 6/93 (6%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IPFCVAGGIK 84 + AK GA L + T G + + + E + + V G I Sbjct: 807 EKTLDYAKMVISAGASILTVHGRTREMKGHKTGLANWEMLRFLRESLPKEVVLFVNGNIL 866 Query: 85 SLEDAAKILSF-GADKISINSPALADPTLITRL 116 + ED L GAD + L DPT+ + Sbjct: 867 AREDIDDCLKATGADGVMSAEGNLYDPTIFSDA 899 >UniRef50_Q7RX85 Putative uncharacterized protein n=1 Tax=Neurospora crassa RepID=Q7RX85_NEUCR Length = 576 Score = 80.3 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 16/175 (9%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AAK+++ D + +N + +G + T ++ Sbjct: 99 AAKLVAPYCDAVDLNLGCPQGIAKRGQ----YGSFLQENQELIFELINTLHKELDIPVTA 154 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVP-- 203 + R T+ TL + Q V + GA + ++ ++ + D E ++ +RE Sbjct: 155 KIRILDTKEATLKYAQNVLRAGASILTVHGRRREQKGHQTGLADWEYIRYLRENLPKETV 214 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI-------GELKAYLATQ 251 + A+G + DG ++A E + Y ++ Sbjct: 215 IFANGNILQHADLEKCLAATGADGVMSAEGNLSDPGLFARPPAVGEEGREYWRSK 269 Score = 63.7 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 6/92 (6%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVID--IPFCVAGGIK 84 + A+ GA L + G + D ++ + E + G I Sbjct: 163 EATLKYAQNVLRAGASILTVHGRRREQKGHQTGLADWEYIRYLRENLPKETVIFANGNIL 222 Query: 85 SLEDAAKILSF-GADKISINSPALADPTLITR 115 D K L+ GAD + L+DP L R Sbjct: 223 QHADLEKCLAATGADGVMSAEGNLSDPGLFAR 254 >UniRef50_Q0STG2 Dihydrouridine synthase family protein n=27 Tax=Clostridiales RepID=Q0STG2_CLOPS Length = 321 Score = 79.9 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 54/168 (32%), Gaps = 8/168 (4%) Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 G I + A K+ G ++I++N + + + F +D + + Sbjct: 72 GFILT---AKKLKDLGYNEINLNLGCPSGTVVGKKRGAGFLAHR--EELDKFLEEIFKIN 126 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREV 199 H+ E + ++ K E++++ + +LE K + Sbjct: 127 HMKISIKTRLGMDK-PEEFYELIKIYNKYPMEELIIHPRTRQDFYGNKPNLEVFKDAISL 185 Query: 200 CHVPLIASGGAGTMEHFLEAFRDAD-VDGALAASVFHKQIINIGELKA 246 P+ +G T+E + + VD + + E+ Sbjct: 186 SKNPVCYNGDIFTLEDHNKLVEEFKEVDKIMLGRGILANPALMNEILN 233 Score = 66.4 bits (161), Expect = 9e-10, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 5/112 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIP 76 +K + + L K Y + +EL+ + T G + + P Sbjct: 132 IKTRLGMDK--PEEFYELIKIYNKYPMEELIIHPRTRQDFYGNKPNLEVFKDAISLSKNP 189 Query: 77 FCVAGGIKSLEDAAKILS--FGADKISINSPALADPTLITRLADRFGVQCIV 126 C G I +LED K++ DKI + LA+P L+ + + + V Sbjct: 190 VCYNGDIFTLEDHNKLVEEFKEVDKIMLGRGILANPALMNEILNNEFMDKKV 241 >UniRef50_A6DU09 Dihydrouridine synthase family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DU09_9BACT Length = 334 Score = 79.9 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 29/182 (15%) Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 +++ +D I AKI+ G S + P + L Sbjct: 96 EAISKYVDPEVFDGVDINMGCPVAKIVKQGG-----CSALINTPEIAKELVLA------- 143 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 K ++RT +T +T +W+ + + I+L+ Q Sbjct: 144 -----------AKAATKLPVSVKTRTGITAHKTEEWMTHLLEVEPAAIILHGRTQKQQSE 192 Query: 187 G-YDLEQLKKVRE-----VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G +++ K H+P +G ++E + ++ +DGA+ Sbjct: 193 GLASWDEIAKGARVRDRLKPHIPFWGNGDVRSIEQAHQLCQEHKLDGAMIGRGVFHNPWI 252 Query: 241 IG 242 Sbjct: 253 FN 254 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 10/104 (9%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVS---RVAEVI 73 VK + + E A ++ + T ++ RV + + Sbjct: 154 VKTRTGITAHKTEE--WMTHLLEVEPA-AIILHGRTQKQQSEGLASWDEIAKGARVRDRL 210 Query: 74 D--IPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLIT 114 IPF G ++S+E A D I +P + Sbjct: 211 KPHIPFWGNGDVRSIEQAHQLCQEHKLDGAMIGRGVFHNPWIFN 254 >UniRef50_A2F0D1 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2F0D1_TRIVA Length = 333 Score = 79.9 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 5/147 (3%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 AD I +N + +V N + R Sbjct: 107 ADAIDLNCGCPESFATSRGTGSSLMSEPEIVADVVSALRRN----YNVPISVKHRIHHNI 162 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEH 215 E++ + + GA I ++ ++ G + +K V + HV I +GG E Sbjct: 163 EESIQFAVACENAGASAIAVHGRLKEQKNKGSVAYDNMKLVFDHLHVAKIGNGGVKNREM 222 Query: 216 FLEAFRDADVDGALAASVFHKQIINIG 242 E + + +S K Sbjct: 223 AKEMMEKTGCESVIISSAALKNPTIFS 249 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 14/173 (8%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGG 82 R H I + + A GA + + + V + V + + + GG Sbjct: 157 RIHHNIEESIQFAVACENAGASAIAVHGRLKEQKNKGSVAYDNMKLVFDHLHVAKIGNGG 216 Query: 83 IKSLEDAAKILS-FGADKISINSPALADPTLI------TRLADRFGVQCIVVGIDTWYDA 135 +K+ E A +++ G + + I+S AL +PT+ + I Sbjct: 217 VKNREMAKEMMEKTGCESVIISSAALKNPTIFSGHPETDPVKLARRYLEIAKQYGCSDRH 276 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 E TR +E ++++ K + +N+DGV Sbjct: 277 EYRWSVNTMLGKYRHITRSPDYEPFTHLEDLDKM------IEYINRDGVFPMP 323 >UniRef50_D2RIC4 Geranylgeranylglyceryl phosphate synthase n=2 Tax=Euryarchaeota RepID=D2RIC4_ARCPR Length = 262 Score = 79.9 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 73/230 (31%), Gaps = 15/230 (6%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA-GGI 83 +++ + D V A+R E GAD + + G +D V + + +DIP + G I Sbjct: 28 DYKSLDDAVETARRVYEGGADVI-LVGGSIGVQGEPLDY-VVREIKKSVDIPVVLFPGNI 85 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 + + +NS +P ITR + +G++ Sbjct: 86 GT---ITRYADALYFMSLLNS---RNPYWITRAQMQAAHLIKTLGLEPLPVGYIVVE-PG 138 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGE---IVLNMMNQDGVRNGYDLEQLKKVREVC 200 G + G ++ + LE +++V Sbjct: 139 GTVGYVGEADLIPRNRPKLASAYALAGQFMGFRFIVTDAGSNPKEGHIPLEMVREVANSI 198 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +P + +GG E + D + F + + +K+++ Sbjct: 199 SIPYVVAGGVRRPEEAEKIIE-CGADAVQVGTAF-EIDNAVERVKSFVKA 246 >UniRef50_A5WG83 TIM-barrel protein, yjbN family n=2 Tax=Moraxellaceae RepID=A5WG83_PSYWF Length = 348 Score = 79.9 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 18/194 (9%), Positives = 54/194 (27%), Gaps = 18/194 (9%) Query: 72 VIDIPFCVAG-GIKSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + + G I + A + G ++++IN +D ++ + + Sbjct: 74 EHPLVLQLGGADISEMTQCAVEAQKRGFNEVNINVGCPSDRVQHNKIGACLMAEP--DTV 131 Query: 130 DTWYDAETGKYHVNQYTGDESRTR--VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + + D+V + G +++ Sbjct: 132 AALVRNMQAHVDIPVTVKHRIGIDEHDSYEFMQDFVSASAEAGCQRFIVHARIAWLNGLS 191 Query: 188 YD---------LEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 E + ++++ + + +GG ++E + VDG + + Sbjct: 192 PKENREIPPLRYEDVYRLKQAFPELHIEINGGIDSIEQIKAHLQQ--VDGVMIGRAAYHN 249 Query: 238 IINIGELKAYLATQ 251 + E ++ Sbjct: 250 PYILAEAMSFWGEA 263 Score = 50.2 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 12/114 (10%) Query: 18 VKGVQFRNHEIIGD-IVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVS 67 VK + + + AE G + + A +G + V Sbjct: 148 VKHRIGIDEHDSYEFMQDFVSASAEAGCQRFIVHARIAWLNGLSPKENREIPPLRYEDVY 207 Query: 68 RVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 R+ + + + GGI S+E L D + I A +P ++ + Sbjct: 208 RLKQAFPELHIEINGGIDSIEQIKAHLQQ-VDGVMIGRAAYHNPYILAEAMSFW 260 >UniRef50_B8HFM3 TIM-barrel protein, nifR3 family n=4 Tax=Actinomycetales RepID=B8HFM3_ARTCA Length = 392 Score = 79.9 bits (196), Expect = 8e-14, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 9/178 (5%) Query: 85 SLEDAAKIL--SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 ++ A ++L AD I +N P + R I + A Sbjct: 94 TVGAAVRMLVEEDRADHIDLNFGCPV-PKVTRRGGGSALPWKIDLFTAIVQTAVREASKG 152 Query: 143 NQY--TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV 199 N LD + + G + L+ +G D + ++RE Sbjct: 153 NIPLTIKMRKGIDDDHLTYLDAGRIARDSGVAAVALHGRTAAQFYSGQADWSAIARLREA 212 Query: 200 -CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 +P++ +G + E + R+ VDG + + G+L+A +G ++R Sbjct: 213 LPDIPVLGNGDIWSAEDAVRMVRETGVDGVVVGRGCQGRPWLFGDLQAAF--EGSDVR 268 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 4/132 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI-DI 75 +K + + + + + + + G + + TA+ D S ++R+ E + DI Sbjct: 158 IKMRKGIDDDHLT-YLDAGRIARDSGVAAVALHGRTAAQFYSGQADWSAIARLREALPDI 216 Query: 76 PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P G I S EDA +++ G D + + P L L F + + Sbjct: 217 PVLGNGDIWSAEDAVRMVRETGVDGVVVGRGCQGRPWLFGDLQAAFEGSDVRHRPNLRQV 276 Query: 135 AETGKYHVNQYT 146 AE H Sbjct: 277 AEGVYRHAELMV 288 >UniRef50_C4Q4G5 tRNA-dihydrouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4Q4G5_SCHMA Length = 370 Score = 79.9 bits (196), Expect = 9e-14, Method: Composition-based stats. Identities = 10/92 (10%), Positives = 27/92 (29%), Gaps = 9/92 (9%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV--------CHVPLIASGG 209 T++ V+ + G + L+ ++++ + +P+I +G Sbjct: 203 TVELVRRLAVMGVDWVTLHARTPQQRSRDCASWNVVQELVDCKIKHCYLGTDIPIILNGD 262 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 + +A G + K Sbjct: 263 VRGLNDAYDAQETTGCHGVMVGRALLKFPHLF 294 Score = 67.6 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 10/92 (10%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEV--------IDIPFCVAGG 82 V L +R A G D + + T R + V + + DIP + G Sbjct: 203 TVELVRRLAVMGVDWVTLHARTPQQRSRDCASWNVVQELVDCKIKHCYLGTDIPIILNGD 262 Query: 83 IKSLEDAAKILS-FGADKISINSPALADPTLI 113 ++ L DA G + + L P L Sbjct: 263 VRGLNDAYDAQETTGCHGVMVGRALLKFPHLF 294 >UniRef50_B9M3C8 Dihydrouridine synthase DuS n=2 Tax=Desulfuromonadales RepID=B9M3C8_GEOSF Length = 306 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 29/100 (29%), Gaps = 1/100 (1%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 + L + + +VL+ G D +V +P+IA+G T Sbjct: 137 DDPEQILRLLPLFEAAKVDFLVLHPRTVLQQYQGLADHAITARVVRETEIPVIANGDIRT 196 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 L+ + G + L+ ++ Sbjct: 197 ASAGLQLLEETGAAGLMLGRGAIADPFIFQRLRQSAPSEP 236 Score = 74.5 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 6/116 (5%) Query: 5 RIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVV 61 IIP L ++ +K + I+ L + D LV + T + Sbjct: 115 EIIPSLRRVIKGTFSLKMRAGYD--DPEQILRLLPLFEAAKVDFLVLHPRTVLQQYQGLA 172 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 D + +RV +IP G I++ ++L GA + + A+ADP + RL Sbjct: 173 DHAITARVVRETEIPVIANGDIRTASAGLQLLEETGAAGLMLGRGAIADPFIFQRL 228 >UniRef50_Q4D174 Dihydrouridine synthase (Dus), putative n=2 Tax=Trypanosoma cruzi RepID=Q4D174_TRYCR Length = 548 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 9/177 (5%) Query: 71 EVIDIPFCV---AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 E D P V +L AA+ + + + +N +G + Sbjct: 176 EETDHPLFVQFCGNDADTLLAAARHVEDDCEAVDVNLGCPQGIARRGH----YGSFLMED 231 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + + R TL + + ++ G + ++ + R Sbjct: 232 WDRVHNILHCLAVELRVPVTAKMRVFDDDALTLKYAEMLRDTGIAVLCVHGRTRHNKRGI 291 Query: 188 YDLEQLKKVREVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 D+E++++VRE +P+I +G T E DG + A Sbjct: 292 ADMEKIRRVREHLRGSIPVIGNGNVLTFEDVRRNMSATMTDGYMCAEPLLWDPRLFA 348 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 6/99 (6%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI--DIP 76 K F + + + A+ + G L + T + + D + RV E + IP Sbjct: 253 KMRVFDDDAL---TLKYAEMLRDTGIAVLCVHGRTRHNKRGIADMEKIRRVREHLRGSIP 309 Query: 77 FCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLIT 114 G + + ED + + + D P L DP L Sbjct: 310 VIGNGNVLTFEDVRRNMSATMTDGYMCAEPLLWDPRLFA 348 >UniRef50_A8F480 Dihydrouridine synthase DuS n=1 Tax=Thermotoga lettingae TMO RepID=A8F480_THELT Length = 305 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 54/187 (28%), Gaps = 9/187 (4%) Query: 61 VDKSWVSRV--AEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + V R+ + ++ + G K+L AAKI+ A I IN+ + Sbjct: 33 RNFKTVQRMLPKDEPNVAVQLFGNDPKTLAQAAKIVEPYAAWIDINAACPVKKVIKKNSG 92 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 ++ + + V K GA I ++ Sbjct: 93 GALLNDL--ERLEKIIGSVKSSVQKPVTVKIRIGFEKNILD--QIVHSCIKAGADGIEVH 148 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +G LK + SG E F +A + + AL A ++ Sbjct: 149 GRTVVQKYSGKAFWDLK--LSQYGISTAVSGDIFEAEDFHKALEMSGANSALIARGALRK 206 Query: 238 IINIGEL 244 ++ Sbjct: 207 PWIFAQI 213 Score = 53.3 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 13/165 (7%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 V+ VK I+ IV + GAD + + T +++ Sbjct: 113 VQKPVTVKIRIGFEKNILDQIVH---SCIKAGADGIEVHGRTVVQKYSGKAFWDL--KLS 167 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADR-----FGVQC 124 + I V+G I ED K L GA+ I AL P + ++ + ++ Sbjct: 168 QY-GISTAVSGDIFEAEDFHKALEMSGANSALIARGALRKPWIFAQITQKRTPKITEIKE 226 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + G+ + + + ++ ++ K Sbjct: 227 TFTKHLKMQIEDEGERSIYKMRQFVAGYTHGMRGAREFREKFMKL 271 >UniRef50_Q6C4K3 tRNA-dihydrouridine synthase 3 n=11 Tax=Saccharomycetales RepID=DUS3_YARLI Length = 622 Score = 79.5 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 76/280 (27%), Gaps = 52/280 (18%) Query: 5 RIIPC----LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGAD------ELVFYDITA 54 RI P LD++ +V +G+ +P + + GAD L Sbjct: 234 RIRPSEKKKLDLKGKYIVS-----PLTTVGN-LPYRRLMKDLGADVTYGEMALTL----P 283 Query: 55 SSDGRVVDKSWVSRVAEVID----IPFCVAG-----GIKSLEDAAKILSFGADKISINSP 105 G + + + + V IK+ + ++ L G +I++N Sbjct: 284 LIQGHKAEWALTRCHSSEVTEGNHFGVQVTAPKHWQAIKAAQAVSE-LCTGISEINLNCG 342 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 D Q + V + T T + Sbjct: 343 CPIDLVYRQGAGSALMDQQGKTARIVRGMSMVS-GDVPITVKMRTGTGSTPTAKKLTARL 401 Query: 166 VQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC------------------HVP--L 204 + + L+ ++ D +++V + P + Sbjct: 402 LAEGQTAAFTLHGRSRAQRYTKLADWNYIREVADSVVNTRDDVREKSELDDHVISHPTWV 461 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + +G T + A +A VD + A + E+ Sbjct: 462 VGNGDCYTWSDWHRAVDEAHVDSVMVARGALIKPWIFEEV 501 >UniRef50_C9M7Q0 Dihydrouridine synthase family protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7Q0_9BACT Length = 317 Score = 79.1 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 51/166 (30%), Gaps = 6/166 (3%) Query: 89 AAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 A L+ G D + IN L + G + Sbjct: 67 AEVALTCGPFDALGINMACPMPKVLKRGAGSALLDRPDEAASMVRELCRFGFPVWPKVRK 126 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 + + + T ++VQ + + GA + ++ G D + +K++ ++A Sbjct: 127 EPAG---SGITTEEFVQILFEAGASCVAVHGRTPGQRYEGQADRKSVKELCRAFPGRILA 183 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 SG T E L+ A L A F + L+ + Sbjct: 184 SGDVFTAEDVLDYL-SAGAGAVLLARGFIADPFIVPRSLDLLSGRP 228 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 1/83 (1%) Query: 34 PLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + E GA + + T D+ V + +G + + ED Sbjct: 137 EFVQILFEAGASCVAVHGRTPGQRYEGQADRKSVKELCRAFPGRILASGDVFTAEDVLDY 196 Query: 93 LSFGADKISINSPALADPTLITR 115 LS GA + + +ADP ++ R Sbjct: 197 LSAGAGAVLLARGFIADPFIVPR 219 >UniRef50_D0NZC8 tRNA-dihydrouridine synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NZC8_PHYIN Length = 379 Score = 79.1 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 23/206 (11%), Positives = 57/206 (27%), Gaps = 24/206 (11%) Query: 71 EVIDIPFCVAGG-IKSLEDAAKI-----------LSFGADKISINSPALADPTLITRLAD 118 + + G ++ L AA + L+ G ++S ++ Sbjct: 62 AEAPLALQLGGNSVEDLGAAAHLSQSYGGFCEINLNTGCPSALVSSRCFGARLMLEPERV 121 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV--TQWETLDWVQEVQKRGAGEIVL 176 R + + + + E +V V G I++ Sbjct: 122 RDICDSMRHSVALASEGNPDHPTAEVTVKCRIGVDDCDSYDELHHYVAAVASAGVRHIIV 181 Query: 177 NMM--------NQDGVRNGY-DLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVD 226 + +D E + ++++ + +GG +++H E +VD Sbjct: 182 HARKCLLKGLSTKDNRTIPPLRYEVVYRLKQDFPELSFTLNGGVKSIQHARELLNTTNVD 241 Query: 227 GALAASVFHKQIINIGELKAYLATQG 252 G + + N + + Sbjct: 242 GIMIGRAAYNTPWNFRDADRLIFNAE 267 >UniRef50_C5DS92 ZYRO0B14872p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DS92_ZYGRO Length = 406 Score = 79.1 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 17/160 (10%), Positives = 46/160 (28%), Gaps = 9/160 (5%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA+++ D + +N +G + +++ Sbjct: 94 QAARLVQDKCDAVDLNLGCPQGIAKKGH----YGSFLMEEWDLVHKLIRNLHENLDVPVT 149 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREV--CHV 202 + R + ++L + + V GA + ++ ++ D E +K +R+ Sbjct: 150 AKIRIFPEKEKSLQYARTVLDAGAQFLTVHGRLREQKGQQSGLADWETIKYLRDNLPPDT 209 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 ++G + D ++A Sbjct: 210 VFFSNGNLLYPNDISRCMDQINCDAVMSAEGNLYNPGIFN 249 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 8/89 (8%) Query: 33 VPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCV---AGGIKSL 86 + A+ + GA L + G + D + + + + P V G + Sbjct: 162 LQYARTVLDAGAQFLTVHGRLREQKGQQSGLADWETIKYLRDNLP-PDTVFFSNGNLLYP 220 Query: 87 EDAAKILSF-GADKISINSPALADPTLIT 114 D ++ + D + L +P + Sbjct: 221 NDISRCMDQINCDAVMSAEGNLYNPGIFN 249 >UniRef50_Q6R3G3 Conserved protein n=1 Tax=Methylomonas sp. LW13 RepID=Q6R3G3_9GAMM Length = 227 Score = 78.7 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 32/262 (12%), Positives = 66/262 (25%), Gaps = 53/262 (20%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAK--------------RYAEEGADELVF 49 +IIP +D++DG VV V + Sbjct: 1 MQIIPVIDLKDGLVVYAAGGDRSRY--QPVHYTSSICESSEISNVVTSLLKLYPFPKFYI 58 Query: 50 YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADK---ISINSPA 106 D+ + G+ + + + + L G+ N + Sbjct: 59 ADLD-AIGGQGNHDEAIDNL-------------FRQYPNKEFWLDKGSSYQALTMTNRAS 104 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 P + T I + + T Sbjct: 105 NCKPVIGTESQRLPISLKNTDLILSLDFKHNQVLGHPGWLDSPELWPETN---------- 154 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADV 225 V+ ++ G G D +L ++ + +A+GG ++ + + + Sbjct: 155 --------VVMTLDLVGSNQGPDFAKLSRLCQDHPDKHFVAAGGVRNVKDLMR-LKTIGI 205 Query: 226 DGALAASVFHKQIINIGELKAY 247 L AS H I+ L+ + Sbjct: 206 TAVLLASALHNGSIDAAMLEKF 227 >UniRef50_B7G5S1 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5S1_PHATR Length = 229 Score = 78.4 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 11/154 (7%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 D I +N + + I A + + +V Sbjct: 78 CDAIDLNLGCPQRTAYLGHFGSYLLDRKDRSLICDIVRAGAAAVSIPIFVKIRLLDKV-- 135 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQD-------GVRNGYDL-EQLKKVREV-CHVPLIAS 207 ET++ Q++++ GA I ++ + G R+G L +Q+ +++ +P+IA+ Sbjct: 136 EETIELCQQLERAGASLIAVHARYRASWERKGAGARDGPALLDQIAVLKQHITSIPIIAN 195 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G T + + DG ++A Sbjct: 196 GNVITYDDVEKNLELTGADGVMSAEGILDNPALF 229 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 13/106 (12%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS--------DGRVVDKSWVSRV 69 VK + + + L ++ GA + + +S ++ + Sbjct: 127 VKIRLLDK---VEETIELCQQLERAGASLIAVHARYRASWERKGAGARDGPALLDQIAVL 183 Query: 70 AEV-IDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLI 113 + IP G + + +D K L GAD + L +P L Sbjct: 184 KQHITSIPIIANGNVITYDDVEKNLELTGADGVMSAEGILDNPALF 229 >UniRef50_Q86L21 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q86L21_DICDI Length = 392 Score = 78.4 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 50/166 (30%), Gaps = 8/166 (4%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A G D + IN + L + A + + + Sbjct: 83 YESAKIANELGYDGVDINMGCPSRKVLSPKQASGAALITNPSLAKEIVKITKEALNFEKP 142 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ-DGVRNGYDLE--QLKKVRE---- 198 ++R + E +W+ + + + L++ + + E L +V E Sbjct: 143 VSVKTRIGFDKIEIDEWIPLILESEPACLTLHLRTKKELSLVPAHWEHQVLDRVVELRNQ 202 Query: 199 -VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + L+ +G T E ++ +DG + + + Sbjct: 203 ISPNTLLVGNGDVETYEQGIDYINQFGIDGVMIGRAVYGNPWLFNK 248 >UniRef50_C9ZWQ2 tRNA-dihydrouridine synthase 1, putative n=2 Tax=Trypanosoma brucei RepID=C9ZWQ2_TRYBG Length = 520 Score = 78.4 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 50/168 (29%), Gaps = 9/168 (5%) Query: 80 AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 +++ AA+ + + + N +G + Sbjct: 162 GNDPETILAAARHVEDYCEAVDFNIGCPQGIARRGH----YGSFLMEDWELLHNILHALA 217 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD---GVRNGYDLEQLKKV 196 + + R + TL + + ++ G + ++ ++ + DL +++V Sbjct: 218 VELRVPVTAKMRIFDDEALTLKYAEMLRDTGIYVLCVHGRTRENKGQQQQPADLRMIRRV 277 Query: 197 REVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 E +P+IA+G T E +G + A Sbjct: 278 HEHLRGSIPIIANGNVLTFEDVPRNLAITGCEGYMCAEPLLWDPKLFA 325 Score = 74.9 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 9/105 (8%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS---SDGRVVDKSWVSRVAEVI-- 73 K F + + + A+ + G L + T + D + RV E + Sbjct: 227 KMRIFDDEAL---TLKYAEMLRDTGIYVLCVHGRTRENKGQQQQPADLRMIRRVHEHLRG 283 Query: 74 DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLA 117 IP G + + ED + L+ G + P L DP L LA Sbjct: 284 SIPIIANGNVLTFEDVPRNLAITGCEGYMCAEPLLWDPKLFAPLA 328 >UniRef50_A5Z3X7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z3X7_9FIRM Length = 326 Score = 78.4 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 64/173 (36%), Gaps = 13/173 (7%) Query: 86 LEDAAKILSFGADK-ISINSPALADPTLITRLADRF--GVQCIVVGIDTWYDAETGKYHV 142 ++ A +++ G DK I++N+ + + F + + D ++ K Sbjct: 75 IKAANQLIELGYDKEINLNAGCPSGTVVSKNKGAGFLKDTEAMDRFFDETFNWLEKKNSE 134 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQ---KRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE 198 +TR+ +E ++ ++ K +++++ ++ + G ++E K E Sbjct: 135 GHNLSISVKTRIGMYEPDEFENILEVYNKYPISQLIVHPRTREQLYKGTPNMEAFKYALE 194 Query: 199 VCHVPLIASGGAGTMEHFLEAFR------DADVDGALAASVFHKQIINIGELK 245 P+ +G T+E++ + + + + E+K Sbjct: 195 NSKNPVCYNGDINTVENYHRIIEKINDDSEMKIGSIMIGRGLIGNPNLVNEIK 247 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 48/153 (31%), Gaps = 14/153 (9%) Query: 18 VKGVQFRNHEI-IGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDI 75 VK +I+ + Y + +L+ + T + E Sbjct: 142 VKTRIGMYEPDEFENILEV---YNKYPISQLIVHPRTREQLYKGTPNMEAFKYALENSKN 198 Query: 76 PFCVAGGIKSLEDAAKILSFGAD-------KISINSPALADPTLITRLA--DRFGVQCIV 126 P C G I ++E+ +I+ D I I + +P L+ + + + + Sbjct: 199 PVCYNGDINTVENYHRIIEKINDDSEMKIGSIMIGRGLIGNPNLVNEIKGGKKLTKKMLE 258 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 V D Y+ +++ + + T Sbjct: 259 VYHDRLYNDFEKIMKADKHLLFKMKEMWTYMSL 291 >UniRef50_B6KUE9 Dihydrouridine synthase domain-containing protein n=4 Tax=Eukaryota RepID=B6KUE9_TOXGO Length = 653 Score = 78.0 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 17/156 (10%), Positives = 43/156 (27%), Gaps = 5/156 (3%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA +++ + +N ++ + ++ + Sbjct: 341 KAAMLVAQDVAAVDVNMGCPKSFSINGGMGAALLKTPLIATDILKTLRRNL----DIPVT 396 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 + R T +T+D+ + + G I ++ + + ++ +PLIA Sbjct: 397 CKIRLLDTIHKTIDFARLCENCGIEAIAIHARETHERPSHRAHWDLFPALKSSLAIPLIA 456 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +G T D + A Sbjct: 457 NGDFLTRRDADVFQEKIGADSLMFARGAMWDPSIFS 492 Score = 67.2 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 2/85 (2%) Query: 31 DIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + A+ G + + + T + + IP G + DA Sbjct: 407 KTIDFARLCENCGIEAIAIHARETHERPSHRAHWDLFPALKSSLAIPLIANGDFLTRRDA 466 Query: 90 AKILSF-GADKISINSPALADPTLI 113 GAD + A+ DP++ Sbjct: 467 DVFQEKIGADSLMFARGAMWDPSIF 491 >UniRef50_B3E8L6 Dihydrouridine synthase, DuS n=1 Tax=Geobacter lovleyi SZ RepID=B3E8L6_GEOLS Length = 219 Score = 78.0 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 1/86 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + + G +VL+ G D +V + +P+IA+G T+E L Sbjct: 58 LLPLFESGGVDFLVLHPRTVLQEYKGLADHGITTRVVQETGLPVIANGDVRTVEDGLRVL 117 Query: 221 RDADVDGALAASVFHKQIINIGELKA 246 G + + L+A Sbjct: 118 EQTKAAGLMLGRGAIADPLLFQRLRA 143 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 5/113 (4%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPL---AKRYAEEGADELVFYDITASSDGRV-VDKS 64 + + +V D + + G D LV + T + + D Sbjct: 29 TILLAVQAIVSARLINILIGYSDPQQIFSLLPLFESGGVDFLVLHPRTVLQEYKGLADHG 88 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 +RV + +P G ++++ED ++L A + + A+ADP L RL Sbjct: 89 ITTRVVQETGLPVIANGDVRTVEDGLRVLEQTKAAGLMLGRGAIADPLLFQRL 141 >UniRef50_B0CNE7 Predicted protein n=3 Tax=Agaricales RepID=B0CNE7_LACBS Length = 308 Score = 78.0 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 47/157 (29%), Gaps = 8/157 (5%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AAK++ I +N T + + + A + Sbjct: 115 QAAKMVMQDVSGIDLNCGCPK--PFSTHAGMGAALLTNPDLLCSILTALRREMPPEITVT 172 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVC-----H 201 + R +Q +TL V+ + G + ++ ++ +E+L+++ E Sbjct: 173 AKIRLLPSQEDTLKLVERIVNTGISALTVHCRTRNMREKDRAVIERLREIVEFVEGLGRG 232 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + +I +G + E + A Sbjct: 233 IAVIENGDCMSWEDAKRVRETTGAHSVMIARGAEANP 269 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 11/93 (11%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI--------DIPFCVAG 81 D + L +R G L + T + R D++ + R+ E++ I G Sbjct: 182 EDTLKLVERIVNTGISALTVHCRTRNM--REKDRAVIERLREIVEFVEGLGRGIAVIENG 239 Query: 82 GIKSLEDAAKILS-FGADKISINSPALADPTLI 113 S EDA ++ GA + I A A+P+ Sbjct: 240 DCMSWEDAKRVRETTGAHSVMIARGAEANPSCF 272 >UniRef50_B1LZS6 Histidine biosynthesis protein n=10 Tax=Alphaproteobacteria RepID=B1LZS6_METRJ Length = 243 Score = 77.6 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 80/247 (32%), Gaps = 39/247 (15%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII---------GDIVPLAKRYAEE-GADELVFYDITAS 55 +IP LD+R G+VV+ + +A+ + A L D+ A Sbjct: 16 VIPVLDLRGGRVVRARRGERSSYAPIETPLAKGSAPDAVARGLRDAWPAAILYVADLDAI 75 Query: 56 SDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 D D + +A + V G L+ G + I S + AD L+T Sbjct: 76 IDRAAPDLRALEAIARACPGVSLWVDAGFAEPAAVDAFLASGLGRPVIGSESQADADLVT 135 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 RL DR + ++ + + E+ Sbjct: 136 RLGDR------------------AVFSLDTRGAERLGPAALHDDP--------ALWPPEV 169 Query: 175 VLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + + Q G G DL L + L A+GG + A R A + GAL AS Sbjct: 170 IAMTLAQVGAGAGPDLGALGALRARAPDRRLYAAGGVRGPDDL-RALRAAGIAGALVASA 228 Query: 234 FHKQIIN 240 H ++ Sbjct: 229 LHDGTLS 235 >UniRef50_O74731 tRNA-dihydrouridine synthase 2 n=2 Tax=Schizosaccharomyces RepID=DUS2_SCHPO Length = 479 Score = 77.6 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 51/175 (29%), Gaps = 13/175 (7%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +AAK+++ I +N ++ + + Sbjct: 98 EAAKLVANDVAGIDLNCGCPKHFSVHAGMGAGLLKNQDRLVSILDALVNEIGKPYKISIS 157 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD----LEQLKKVREVCHVP 203 + R T+ +TL V+ + G I ++ L ++ V V Sbjct: 158 CKIRLLETKEDTLKLVERICDTGVRAITVHCRTTPMRNTEPADRSYLSEIVGVCRNKDVS 217 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVF--------HKQII-NIGELKAYLA 249 ++ +G + L+ VDG L A + + + + +L Sbjct: 218 ILVNGDVLSYNDGLDVIEKYGVDGVLIARAAERNVSCFRIEGPLSSFKVAEEFLK 272 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 5/98 (5%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-RVVDKSWVSRV---AEVIDIPF 77 + R E D + L +R + G + + T D+S++S + D+ Sbjct: 159 KIRLLETKEDTLKLVERICDTGVRAITVHCRTTPMRNTEPADRSYLSEIVGVCRNKDVSI 218 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 V G + S D ++ +G D + I A + + Sbjct: 219 LVNGDVLSYNDGLDVIEKYGVDGVLIARAAERNVSCFR 256 >UniRef50_Q8TVJ8 Indole-3-glycerol phosphate synthase n=1 Tax=Methanopyrus kandleri RepID=TRPC_METKA Length = 254 Score = 77.2 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 69/232 (29%), Gaps = 33/232 (14%) Query: 22 QFR-NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA 80 Q R D+ A+ Y GA + DGR +V V E +D+P Sbjct: 51 QGRLRDVDAEDVAERARAYERGGAAGISVLTEPEFFDGRP---EYVEVVREAVDVPVLRK 107 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 I + +GAD + I + A+ +++ ID W E Sbjct: 108 DFIIDPVQVEESAHYGADAVLIIAAAVGREAPELIDLAHEHGMEVLLEIDRWEHLELLSE 167 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC 200 G +R T +D + + E +V+++ Sbjct: 168 CDPDVVGVNNRDLRTLE--VDLNRTL------------------------ELGPEVKDLT 201 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + PL+A G E + D L + + + E L G Sbjct: 202 NAPLVAESGVSGPEDVVLLGEV--ADAVLVGTYLMRAP-DPSEAVRKLVEAG 250 >UniRef50_B8C9N7 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C9N7_THAPS Length = 389 Score = 77.2 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 50/152 (32%), Gaps = 13/152 (8%) Query: 99 KISINSPALADPT--------LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 I +N L+ R A+ + + + + Sbjct: 109 GIDLNLGCPQKCAEDEGFGAFLVERNAEGAVECIASMRLAIVEFCQKNLISSKPMLSAKI 168 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHV----PLI 205 R + +T+ + ++++ G I ++ N++ +G D E K+ V P+I Sbjct: 169 RLLDSVEDTIAFARKLRNAGIDYIAIHCRNREAKHDGAADWEAGAKLVSSLSVGDALPVI 228 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +GG + + G + A+ + + Sbjct: 229 VNGGISCYTDAEFVTKQTNCHGVMVATGYLQN 260 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDI----PFCVAGGI 83 + D + A++ G D + + + D +++ + + P V GGI Sbjct: 174 VEDTIAFARKLRNAGIDYIAIHCRNREAKHDGAADWEAGAKLVSSLSVGDALPVIVNGGI 233 Query: 84 KSLEDAAKI-LSFGADKISINSPALAD 109 DA + + + + L + Sbjct: 234 SCYTDAEFVTKQTNCHGVMVATGYLQN 260 >UniRef50_B6A9H7 Dihydrouridine synthase family protein n=2 Tax=Eukaryota RepID=B6A9H7_9CRYT Length = 716 Score = 77.2 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 67/254 (26%), Gaps = 45/254 (17%) Query: 37 KRYAEEGADELVFYDIT---ASSDGRVVDKSWVSRVAEVIDIPFCVAGG----------- 82 + GAD + F ++T G+ + + + R +E +AGG Sbjct: 348 RLCVRLGAD-ITFSEMTLCNEILAGKSSELALLRRHSEERCFGIQLAGGNFETIAKTGEF 406 Query: 83 IKSLED-----------AAKILSFGADKISINSPALADPTLI--TRLADRFGVQCIVVGI 129 I D + GA I I+ P L + + ++ D+ + + Sbjct: 407 INEYCDYDFLDINVACPLKSLHDRGAGSILIDRPKLLESIITGLKKVIDKPLTIKLRMAN 466 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGY 188 + + ++ + I+++ Sbjct: 467 SASPPNLKFYENTYINNPLNWDIIYSNMAAHKLIKPLVNYNINGIIIHGRTSSQRYNKSA 526 Query: 189 DLEQLKKVREVCHVP----------------LIASGGAGTMEHFLEAFRDADVDGALAAS 232 D L+ ++ LI G + + + DV+ + Sbjct: 527 DWNYLRYCSKILKNEYLTYKDTNKNITYCPSLIGCGDVLNYCDYYKHLNEDDVNAVMIGR 586 Query: 233 VFHKQIINIGELKA 246 + E+K Sbjct: 587 GALLKPWIFTEIKE 600 >UniRef50_Q46DH4 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=4 Tax=Methanosarcinaceae RepID=Q46DH4_METBF Length = 244 Score = 76.8 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 75/247 (30%), Gaps = 34/247 (13%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI-----------IGDIVPLAKRYAEEGADELVFYDI 52 R++ +D+ + VV + D V + + E+ D+ Sbjct: 2 FRVVFVMDIFNRNVVLAKGGIREKYRPVSDSSTVCSSSDPVDIVELLH---PREVYIADL 58 Query: 53 TASSDGR--VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 D + + V+ D + GI + +D K LS A+ I + Sbjct: 59 NVLQDKGYLETNVDVIREVSLKADT--MLDFGISASQDVEKALSI-AETAVIGTET---- 111 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 G + ++ + V+ + Sbjct: 112 ----------GTLSAIKDAAYGNSGRISVSIDIKHGKVLKNDPELPESPFEIVKLLNNLP 161 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 +++ +++ G +G+D E L+K+ E ++ +GG M + GAL Sbjct: 162 LKDLIFLDLDRVGTASGFDPEFLRKLVECSRHSVLLAGGVKDMGDLF-TLDKLGIKGALV 220 Query: 231 ASVFHKQ 237 A+ H Sbjct: 221 ATAVHSG 227 >UniRef50_C1TL75 tRNA-dihydrouridine synthase n=2 Tax=Synergistaceae RepID=C1TL75_9BACT Length = 345 Score = 76.8 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 63/225 (28%), Gaps = 16/225 (7%) Query: 37 KRYAEEGA-----DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDA 89 + + GA + + +T + + R + + G + A Sbjct: 40 RMFWRLGAGLAHTEMVSCAGLTRKNRKT---TEMLFRAPGEGPLVLQLFAGDSDTLMRGA 96 Query: 90 AKILSFGA--DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 LS G D + IN L R + + G + Sbjct: 97 EIALSLGVPFDALGINMACPMPKVLKKGAGARLLSRLDLAVDMVRRLNRLGLPVWPKIRK 156 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIA 206 + +TL++ + + GA + ++ G D +++++V + A Sbjct: 157 IVP--DGSGPDTLEFASALVEAGAANVGVHGRTASQRYEGTSDFDEVRRVARALPGVISA 214 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 SG E +A A + + ++L Sbjct: 215 SGDISGPEDVSKAL-AGGCVSVFLARGGVTDPFVLPRILSHLGYN 258 Score = 70.3 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 1/113 (0%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + D + A E GA + + TAS D V RVA + Sbjct: 153 KIRKIVPDGSGPDTLEFASALVEAGAANVGVHGRTASQRYEGTSDFDEVRRVARALPGVI 212 Query: 78 CVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 +G I ED +K L+ G + + + DP ++ R+ G D Sbjct: 213 SASGDISGPEDVSKALAGGCVSVFLARGGVTDPFVLPRILSHLGYNIGDSVYD 265 >UniRef50_Q4PBU9 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4PBU9_USTMA Length = 477 Score = 76.8 bits (188), Expect = 7e-13, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 52/184 (28%), Gaps = 29/184 (15%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 DA++++ D + +N P L + ++ D + Sbjct: 181 FADASELIGRFVDGVDLNCGCPQ-PWAYEELLGSYLLRQPETVRDMVRAVKARMGSDFC- 238 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH--- 201 + R T V+ GA + ++ + + +L+ +K + + Sbjct: 239 VSVKIRIDPDLRLTDALVRNALHAGASILQIHGRTRWQSSSEPVNLDGIKFAVDAANACG 298 Query: 202 -----------------------VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 VP +A+G T++ + + GA++A Sbjct: 299 FRTSWGSKGGAAARFADGGSGGLVPCVANGDVWTLDDAIHYRQTTGCRGAMSARGLLANP 358 Query: 239 INIG 242 Sbjct: 359 ALFS 362 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 34/135 (25%), Gaps = 37/135 (27%) Query: 16 QVVKGVQFRNH----EIIGDIV-----PLAKRYAEEGADELVFYDITASSDGR-VVDKSW 65 + VK + +I D L + GA L + T V+ Sbjct: 227 RAVKARMGSDFCVSVKIRIDPDLRLTDALVRNALHAGASILQIHGRTRWQSSSEPVNLDG 286 Query: 66 VSRVAEVID--------------------------IPFCVAGGIKSLEDAAKILS-FGAD 98 + + + +P G + +L+DA G Sbjct: 287 IKFAVDAANACGFRTSWGSKGGAAARFADGGSGGLVPCVANGDVWTLDDAIHYRQTTGCR 346 Query: 99 KISINSPALADPTLI 113 LA+P L Sbjct: 347 GAMSARGLLANPALF 361 >UniRef50_D1N5U0 Dihydrouridine synthase DuS n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5U0_9BACT Length = 288 Score = 76.4 bits (187), Expect = 8e-13, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 49/165 (29%), Gaps = 6/165 (3%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 AA+ + GA I++N + ++ + + T + Sbjct: 62 AAAAARFMELGAAGINLNFGCPSRQVTSGGAGGG-ALRDLAGMVTTVETVKKAIPASPLS 120 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGA-GEIVLNMMNQDGVRNGYD--LEQLKK-VREVCH 201 + + E + + + G L+ E+ + +R Sbjct: 121 VKLRTGWE-SPDEMQRILPALAETGCVSAFFLHFRTVREQYRPVSGREERFEAGLRLAAP 179 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 VP++ +G + + E G + A + + + + ++ Sbjct: 180 VPVVLNGDIDSPDDASELLERTGAAGVMCARGWLRDPLLLNRIRQ 224 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 44/153 (28%), Gaps = 15/153 (9%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEG-ADELVFYDIT-ASSD---- 57 K+ IP VK ++ + AE G + T Sbjct: 111 KKAIPA----SPLSVKLRTGWESPD--EMQRILPALAETGCVSAFFLHFRTVREQYRPVS 164 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 GR + + +P + G I S +DA+++L GA + L DP L+ R+ Sbjct: 165 GREERFE--AGLRLAAPVPVVLNGDIDSPDDASELLERTGAAGVMCARGWLRDPLLLNRI 222 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + D + Sbjct: 223 RQGRRDNSGLPSADEARHRLFRCVLEQGFKVCR 255 >UniRef50_A4RM51 Putative uncharacterized protein n=2 Tax=Saccharomyceta RepID=A4RM51_MAGGR Length = 614 Score = 76.4 bits (187), Expect = 9e-13, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 51/178 (28%), Gaps = 20/178 (11%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +AAK ++ D + +N +G ++ Sbjct: 134 EAAKHVAPYCDAVDLNLGCPQGIARKGH----YGAFLQEDQELIHKLIRQLHDGLSIPVT 189 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVP- 203 + R T TL + + V GA + ++ ++ + D ++ +RE ++P Sbjct: 190 AKIRILDTPEATLAYARNVLDAGASILTVHGRRREQKGHLTGVADWSAIRHLRE--NLPP 247 Query: 204 ---LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI-------GELKAYLATQ 251 + A+G D ++A E + Y + Sbjct: 248 ETVIFANGNILQRGDLERCLEATGADAVMSAEGNLSDPTLFAPEPPVGEEGREYWRGK 305 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 40/153 (26%), Gaps = 8/153 (5%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIP---FCVAGGI 83 + A+ + GA L + G + D S + + E + P G I Sbjct: 199 EATLAYARNVLDAGASILTVHGRRREQKGHLTGVADWSAIRHLRENLP-PETVIFANGNI 257 Query: 84 KSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 D + L GAD + L+DPTL + Sbjct: 258 LQRGDLERCLEATGADAVMSAEGNLSDPTLFAPEPPVGEEGREYWRGKDGLGGFRVDAVM 317 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 +Y R + + V I Sbjct: 318 RRYLDILHRYVEDKEPPVRRPLFVVGEDEAWIT 350 >UniRef50_A9V413 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V413_MONBE Length = 487 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 52/176 (29%), Gaps = 14/176 (7%) Query: 77 FCVAGGIKSLEDAAK---ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 + G + AA+ +++ I +N ++ + Q Sbjct: 79 VILQIGTSDPDRAARVAQMMAADVAGIDVNMGCPKPFSIKGDMGAALLRQP----DRVRD 134 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----D 189 + + + R T ETL+ V +Q G + ++ + Sbjct: 135 ILTSLVATTTKPITCKIRVLPTLEETLNLVNIIQDAGVAALGIHGRVPNQRPREPITDYQ 194 Query: 190 LEQLKKVREVCHVPLIASGG---AGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 E ++ V + C +P+I +GG + + L + A + Sbjct: 195 YEAIRAVAKACRIPVICNGGSLDMDSYDDILAFRDKCGCSSVMVARAAQYNMSIFS 250 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 8/93 (8%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVV----DKSWVSRVAEVIDIPFCVAGGIK 84 + + + L + G L + + R + VA+ IP GG Sbjct: 157 LEETLNLVNIIQDAGVAALGIHGRVPNQRPREPITDYQYEAIRAVAKACRIPVICNGGSL 216 Query: 85 SLEDAAKIL----SFGADKISINSPALADPTLI 113 ++ IL G + + A + ++ Sbjct: 217 DMDSYDDILAFRDKCGCSSVMVARAAQYNMSIF 249 >UniRef50_Q7UQJ1 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UQJ1_RHOBA Length = 272 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 68/244 (27%), Gaps = 25/244 (10%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEI------IGDIVPLAKRYAEEGADELVFYDITASS-- 56 R+I +D++DG V G+ + D L Y G D+ Sbjct: 29 RLIGVIDLKDGVAVHGIAGNRSQYQPIAGLSADECSLLHWYRSIGIRRFYVADLNGLMGT 88 Query: 57 -DGRVVDKSWVSRVAEVIDIPFCVA--GGIKSLEDAAKILSFGADKISINSPALADPTLI 113 R + V+ + + + G I ++ + LS +N + L Sbjct: 89 GRQRDALLALVTEIRQEETLWIDSGWTGSISRMDQ--EWLSR------MNRSIANESNLR 140 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 +A V ++ + V +WV KR E Sbjct: 141 WIIATETADSLDVQDR---MLEFVNSSNLTLSLDFRAGQFVGPETASNWVLAALKRNIRE 197 Query: 174 IVLNMMNQDGVRNGYDLEQL--KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +L + G +G ++ V + I GG ++ L A Sbjct: 198 GILLDVASVGSESGPASGEMFSDCVSRFGDMSWITGGGIRNVKDV-RGLVSEGYSAFLVA 256 Query: 232 SVFH 235 S Sbjct: 257 SAML 260 >UniRef50_A4IQ84 Indole-3-glycerol phosphate synthase n=7 Tax=Bacteria RepID=TRPC_GEOTN Length = 258 Score = 76.0 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 58/213 (27%), Gaps = 36/213 (16%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D V +AK Y GAD + G + ++ V E ++IP I Sbjct: 58 RPDFDPVAIAKAYERAGADAISVLTDERYFQG---HRRYLQEVKEAVNIPVLRKDFIIDR 114 Query: 87 EDAAKILSFGADKISINSPAL--ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + GAD I + AL + + A G++C+V + Sbjct: 115 RQVEESARLGADAILLIGEALSPEMLEALYQEAYSIGLECLVEVHAKETLERILARFTPE 174 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 G +R T TL+ + + + + Sbjct: 175 VVGINNRDLHTFVTTLEATKALASL-----------------------------IPPSSV 205 Query: 205 IAS-GGAGTMEHFLEAFRDADVDGALAASVFHK 236 I S G + R V L + Sbjct: 206 IVSESGISSYRDV-RTIRSYGVQAMLVGESLMR 237 >UniRef50_A8MRX7 Uncharacterized protein At3g63510.2 n=5 Tax=Arabidopsis thaliana RepID=A8MRX7_ARATH Length = 386 Score = 75.7 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 61/214 (28%), Gaps = 30/214 (14%) Query: 44 ADELVFY---DITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSF-GAD 98 A E + + ++ V + G +++L AAK+ G D Sbjct: 53 AAETLVHQQTNLDRFLAFSPQQHPIV----------LQLGGSNVENLAKAAKLSDAYGYD 102 Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR--VTQ 156 +I++N P + + + A +V + Sbjct: 103 EINLNCGCP-SPKVAGHGCFGVSLMLKPKLVGEAMSAIAANTNVPVTVKCRIGVDNHDSY 161 Query: 157 WETLDWVQEVQKR-GAGEIVLNMMNQD-GVRNGYDLEQL---------KKVREVCHVPLI 205 E D++ +V +++ G + D ++ VR+ + Sbjct: 162 DELCDFIYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFT 221 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +GG ++ A ++ G + + Sbjct: 222 INGGITSVSKVNAALKE-GAHGVMVGRAAYNNPW 254 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 16/108 (14%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAE----EGADELVFYDITASSDG-RVVDKSWV------ 66 VK ++ D L + + + A G D + Sbjct: 149 VKCRIGVDNHDSYD--ELCDFIYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYE 206 Query: 67 ---SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + V + D+ F + GGI S+ L GA + + A +P Sbjct: 207 YYYALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPW 254 >UniRef50_C6A2A3 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Thermococcus sibiricus MM 739 RepID=GGGPS_THESM Length = 255 Score = 75.7 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 66/221 (29%), Gaps = 16/221 (7%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA----GGIKSLEDA 89 LAK E G D ++ T + V V + E +P + GG+ DA Sbjct: 37 KLAKISEEVGVDAIMVGGSTGAE--GEVLDGVVKAIKENSSLPVILFPGSHGGLSKYADA 94 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 +S +NS L + I Y + Sbjct: 95 VFFMSL------LNSRNPFFIAGAQALGAFRVKHYGIEPIPMAYLVVEPGETAGWVSDAN 148 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGG 209 R + Q G + L G E +K V+ VPLI GG Sbjct: 149 LIPRHKPKIAAAYALAGQYMGMRLVYLEA--GSGAPEHIPNEMIKVVKSAIDVPLIVGGG 206 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 T E E + + D + + ++ ++ E K L + Sbjct: 207 IRTYEDAKEVVQ-SGADIIVTGTAI-EKAGSLEESKKRLES 245 Score = 58.3 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 A G + + + + + V ID+P V GGI++ EDA + Sbjct: 158 AAAYALAGQYMGMRLVYLEAGSGAPEHIPN--EMIKVVKSAIDVPLIVGGGIRTYEDAKE 215 Query: 92 ILSFGADKISINSP 105 ++ GAD I + Sbjct: 216 VVQSGADIIVTGTA 229 >UniRef50_Q8L940 Pyridoxal biosynthesis protein PDX1.3 n=173 Tax=cellular organisms RepID=PDX13_ARATH Length = 309 Score = 75.7 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 19/252 (7%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT----ASSDG--RVVDKSW 65 V+ G +++ A+ E GA ++ + + G R+ D Sbjct: 25 VKVGLAQMLRGGVIMDVVN--AEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQM 82 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + + + + IP I +A + + G D I + F I Sbjct: 83 IKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTLADEDHHINKHNFR---I 139 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 E + ++ ++ V+ V+ VL M+ D V Sbjct: 140 PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVNGDIRVLRNMDDDEVF 199 Query: 186 N-----GYDLEQLKKVREVCHVPLI--ASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + + + +++ +P++ A+GG T DG S K Sbjct: 200 TFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADA-ALMMQLGCDGVFVGSGIFKSG 258 Query: 239 INIGELKAYLAT 250 +A + Sbjct: 259 DPARRARAIVQA 270 >UniRef50_B8BQ55 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQ55_THAPS Length = 451 Score = 75.7 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 31/99 (31%), Gaps = 10/99 (10%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHV-------PLIAS 207 + +Q + G I ++ + + D +++ + V PLIA+ Sbjct: 195 TPEERIQRLIDCGVDLITVHGRTRFENKVAVGKADWNSIERCVQTARVYSGNAQYPLIAN 254 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 GG T + G +++ + L Sbjct: 255 GGIETYNDVEKCLEQTQASGVMSSESLLENPGLFSNLSE 293 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 11/128 (8%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDI-------PFCVAG 81 +R + G D + + T + D + + R + + P G Sbjct: 196 PEERIQRLIDCGVDLITVHGRTRFENKVAVGKADWNSIERCVQTARVYSGNAQYPLIANG 255 Query: 82 GIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 GI++ D K L A + + L +P L + L++ + G+ Y Sbjct: 256 GIETYNDVEKCLEQTQASGVMSSESLLENPGLFSNLSEETACDTVARGMLERQLGYACMY 315 Query: 141 HVNQYTGD 148 Sbjct: 316 LDYATLFP 323 >UniRef50_C9KKE5 Dihydroorotate oxidase n=6 Tax=Bacteria RepID=C9KKE5_9FIRM Length = 316 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 21/116 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVS 67 + DIV +AK GAD + + IT G + V V Sbjct: 171 VTDIVAMAKAVEAAGADAVSLINTLLGMEIDIHRFRPVLGNITGGLSGPCVKPVAVRMVW 230 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 +VA+ + IP GGI S EDA + GA +++ + DP + ++ D Sbjct: 231 QVAQAVHIPIIGMGGIASAEDAVEFFLAGASAVAVGTANFTDPEITMKICDGLTDY 286 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 5/72 (6%) Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL- 244 + + +V + H+P+I GG + E +E F A + ++ Sbjct: 222 KPVAVRMVWQVAQAVHIPIIGMGGIASAEDAVEFF-LAGASAVAVGTANFTDPEITMKIC 280 Query: 245 ---KAYLATQGV 253 YLA G Sbjct: 281 DGLTDYLAENGF 292 >UniRef50_C9RM69 TIM-barrel protein, yjbN family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM69_FIBSS Length = 345 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 63/192 (32%), Gaps = 17/192 (8%) Query: 77 FCVAG-GIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + G L A+K++ G ++++N +D + VV Sbjct: 66 LQLGGSNPADLASASKLVEAAGFSEVNLNCGCPSDRVQNGNFGACLMKEKNVVADCFKAM 125 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY------ 188 + V+ + D++Q V+ G +++ Sbjct: 126 QDAVSIPVSIKCRIGVDDLDSWEFFTDFIQTVRDAGCKIFIVHARKAWLKGLSPKENREV 185 Query: 189 ---DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 E + +++ E+ + L +GG T++ E +D DG + ++ + + Sbjct: 186 PPLHYEFVHRLKAEMPELNLSINGGIKTLDQIEEQLKDL--DGVMVGREAYENPWFLHDA 243 Query: 245 KAYLATQGVEIR 256 A + ++R Sbjct: 244 DARIFG---DVR 252 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 35/110 (31%), Gaps = 12/110 (10%) Query: 18 VKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVS 67 +K + + + + G + + A G + +V Sbjct: 135 IKCRIGVDDLDSWEFFTDFIQTVRDAGCKIFIVHARKAWLKGLSPKENREVPPLHYEFVH 194 Query: 68 RVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 R+ + + + GGIK+L+ + L D + + A +P + Sbjct: 195 RLKAEMPELNLSINGGIKTLDQIEEQLKD-LDGVMVGREAYENPWFLHDA 243 >UniRef50_A8F3E7 N-acylglucosamine-6-phosphate 2-epimerase n=1 Tax=Thermotoga lettingae TMO RepID=A8F3E7_THELT Length = 222 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 69/234 (29%), Gaps = 50/234 (21%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFC 78 + + + IV +A+ GA + R + V V + + IP Sbjct: 13 QLEPGDPVQDVSFIVNMARSADYAGAVAV-----------RTNNADHVRAVKDSVSIPVI 61 Query: 79 V-------AGGIK-SLEDAAKILSFGADKISINSPALADP----TLITRLADRFGVQCIV 126 I + E A ++ GAD ++I+ P TL + F I+ Sbjct: 62 GLVKDRNYQAFITPTFEHARDVIKAGADFVAIDCTRSERPVQLKTLFEEIRSSFPDVGII 121 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + + V ++ + + Sbjct: 122 A-------------------------DIADEADAELVSALRPDFIATTLCGYTPYTLGCS 156 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++E ++ + +P+IA GG T+E AF++ + + + Sbjct: 157 LPNIELVRGLSRKMSIPIIAEGGYTTLEEVQNAFQN-GAYAVVIGTAI-TRPWI 208 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 1/60 (1%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + + V ++ + IP GG +LE+ GA + I + A+ P + + Sbjct: 153 LGCSLPNIELVRGLSRKMSIPIIAEGGYTTLEEVQNAFQNGAYAVVIGT-AITRPWITIK 211 >UniRef50_B2KES4 Dihydrouridine synthase DuS n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KES4_ELUMP Length = 318 Score = 75.3 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 1/89 (1%) Query: 34 PLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 +AK EGA ++ + A G D +++V + IP GGI + A K+ Sbjct: 160 KIAKLAENEGAAAVIMHARYAGNVHGGPADLEALAKVVSAVKIPVIGNGGIVDVNTADKM 219 Query: 93 LSFGADKISINSPALADPTLITRLADRFG 121 G I + A+ + + + + Sbjct: 220 FETGVRGIMVGRGAIGNINIFKSIINGCD 248 Score = 74.9 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 4/153 (2%) Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 D I IN+ I R + + + +A + + Sbjct: 99 DIIDINAGCPVKK--INRAGAGCVLIKDEKLLASIVNAAVNSVSIPVTLKTRIGLTAGDF 156 Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHF 216 + + + GA ++++ V G DLE L KV +P+I +GG + Sbjct: 157 KGDKIAKLAENEGAAAVIMHARYAGNVHGGPADLEALAKVVSAVKIPVIGNGGIVDVNTA 216 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + F V G + I + Sbjct: 217 DKMFE-TGVRGIMVGRGAIGNINIFKSIINGCD 248 >UniRef50_C3Q9B4 Dihydrouridine synthase n=18 Tax=Bacteroidales RepID=C3Q9B4_9BACE Length = 315 Score = 74.9 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 46/160 (28%), Gaps = 8/160 (5%) Query: 85 SLEDAAK----ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 S E A K ++ G ++ IN P L R + T Sbjct: 72 SFEKAEKILSLLIEKGYKEVDINMGCPF-PMLAKRHNGSGILPYPEEVQALLSWLITEYP 130 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV 199 ++ E L + + ++V++ G DL+ + + V Sbjct: 131 QISFSIKMRLGWED-PEECLKLAPIINELPLRQVVMHPRLGKQQYKGEVDLKAFEAFQGV 189 Query: 200 CHVPLIASGGAGTMEHFLEAFRD-ADVDGALAASVFHKQI 238 C PLI +G ++E + G + Sbjct: 190 CKHPLIYNGDINSVEDIHRIQEQFPGLAGMMIGRGLLANP 229 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 33/101 (32%), Gaps = 5/101 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 +K E + + LA E ++V + + VD V P Sbjct: 136 IKMRLGW--EDPEECLKLAPIINELPLRQVVMHPRLGKQQYKGEVDLKAFEAFQGVCKHP 193 Query: 77 FCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITR 115 G I S+ED +I G + I LA+P L Sbjct: 194 LIYNGDINSVEDIHRIQEQFPGLAGMMIGRGLLANPALALE 234 >UniRef50_C5LIP5 Ornithine decarboxylase n=4 Tax=Perkinsus marinus ATCC 50983 RepID=C5LIP5_9ALVE Length = 720 Score = 74.9 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 48/173 (27%), Gaps = 12/173 (6%) Query: 80 AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF--GVQCIVVGIDTWYDAET 137 G + + +AAK + I +N + ++ ++ Sbjct: 375 DGDV--IVEAAKHIEDQVSCIDLNLGCPQGIARRGHYGSFLLEEPELVLRIVEKMVKGIK 432 Query: 138 GKYHVNQYTGDESRTRVTQWETL----DWVQEVQKRGAGEIVLNMMNQDGVRNGYD---L 190 V + + ++V+ + G I L+ ++ Sbjct: 433 CPVSVKIRLMTAKDDDGSGRPDVAATKEFVKRLDSLGVDLIALHPRTKEWKGQLTQACWW 492 Query: 191 EQLKKVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +VR +P I +GG E + F D +++ + Sbjct: 493 QAAAEVRACVPDIPFIVNGGISCFEDVEKCFEVTKCDAVMSSECILEVPTLFR 545 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 36/115 (31%), Gaps = 12/115 (10%) Query: 12 VRDGQVVKGVQ-------FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD-- 62 ++ VK + KR G D + + T G++ Sbjct: 431 IKCPVSVKIRLMTAKDDDGSGRPDVAATKEFVKRLDSLGVDLIALHPRTKEWKGQLTQAC 490 Query: 63 -KSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 + V + DIPF V GGI ED K D + + L PTL Sbjct: 491 WWQAAAEVRACVPDIPFIVNGGISCFEDVEKCFEVTKCDAVMSSECILEVPTLFR 545 >UniRef50_B2UM21 Dihydrouridine synthase DuS n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM21_AKKM8 Length = 352 Score = 74.5 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 17/168 (10%), Positives = 40/168 (23%), Gaps = 3/168 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 DA ++ + +N A + + Sbjct: 78 ARDAQVLMEHACAGVDLNMGCPAPIVCRRNAGGGMLRSLKAMDAALGALRDVLPPGA-FT 136 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCHVPL 204 T E + + + ++ ++G R+ E +K + P+ Sbjct: 137 VKCRLGYE-TPDEFERILPVIASHSPDRVCIHARTVREGYRSPVHPEWVKWAAGMLKCPV 195 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +A+G R A G + + +L + Sbjct: 196 VANGNIVDAATAEAWVRLARPAGLMIGRAALRNPWIFSQLHSRFQGHP 243 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 37/140 (26%), Gaps = 2/140 (1%) Query: 45 DELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISI 102 D + + T V WV A ++ P G I A + + I Sbjct: 162 DRVCIHARTVREGYRSPVHPEWVKWAAGMLKCPVVANGNIVDAATAEAWVRLARPAGLMI 221 Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 AL +P + ++L RF + + E + Sbjct: 222 GRAALRNPWIFSQLHSRFQGHPAADLTFRNVLHYIRRLYERTREMQEHYVEEKHIHRMKK 281 Query: 163 VQEVQKRGAGEIVLNMMNQD 182 RG + + M + Sbjct: 282 YLVYTARGLPDTFDHYMKRA 301 >UniRef50_D0LY25 TIM-barrel protein, yjbN family n=3 Tax=Bacteria RepID=D0LY25_HALO1 Length = 376 Score = 74.5 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 55/212 (25%), Gaps = 25/212 (11%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED----AAKILSFGADKISINS 104 T R + I + G E A +G D++++N Sbjct: 73 IVTGTIIHGDRPRYLDFSEA---EHPIALQLGGD--DAEALATCARIAEDWGYDEVNLNV 127 Query: 105 PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 + + VV V R + ++V+ Sbjct: 128 GCPSSRVSSGSFGACLMARPEVVARAVEAMRAAVAIPVTVKHRIGIDDRDRYEDMREFVR 187 Query: 165 EVQKRGAGEIVLNMMNQDGVRNGY------------DLEQLKKVREVCHVPLIASGGAGT 212 V + GA ++ D+ +LK+ E H+P+ +GG Sbjct: 188 VVAEAGADRFSVHARKAWLSGLSPKENREVPPLRYADVHRLKR--EFPHLPIEINGGIVD 245 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 ++ E VD + + E Sbjct: 246 LDSAQEQLAH--VDAVMIGRAAYNTPWIFAEA 275 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 42/131 (32%), Gaps = 19/131 (14%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI-IGDIVPLAKRYAEEGADELVFYDITASSDG- 58 M A IP VK + D+ + AE GAD + A G Sbjct: 157 MRAAVAIPV-------TVKHRIGIDDRDRYEDMREFVRVVAEAGADRFSVHARKAWLSGL 209 Query: 59 --------RVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 + + V R+ +P + GGI L+ A + L D + I A Sbjct: 210 SPKENREVPPLRYADVHRLKREFPHLPIEINGGIVDLDSAQEQL-AHVDAVMIGRAAYNT 268 Query: 110 PTLITRLADRF 120 P + RF Sbjct: 269 PWIFAEADARF 279 >UniRef50_Q5CRK5 Ylr401cp-like protein with 2 CCCH domains plus Dus1p tRNA dihydrouridine synthase Tim barrel n=2 Tax=Cryptosporidium RepID=Q5CRK5_CRYPV Length = 707 Score = 74.1 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 29/255 (11%), Positives = 64/255 (25%), Gaps = 54/255 (21%) Query: 43 GADELVF---YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-----IKSLEDAAKILS 94 GAD + G+ + + + + E +AGG IK+ E + Sbjct: 339 GAD-VTVSEMVLCNEILSGKASELALLKKSPEEKYFGIQLAGGNKSTIIKTGEFINEHCE 397 Query: 95 FGADKISINSPA-----------------LADPTLITRLADRFGVQCIVVGIDTWYDA-- 135 D I IN+ +++ + + + +V Sbjct: 398 --FDFIDINAACPLKSLHDKGAGSILVDRVSELETMVKGLKKVMDGKLVTVKVRMSHGGS 455 Query: 136 ---ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLE 191 + + +T + + G + ++ D Sbjct: 456 PINKNLSEKDYFENFENWPVIYHNMKTHKILNILCDSGIDALTIHGRTSFQRYTKEADWS 515 Query: 192 QLK------------KVREVCH-------VP-LIASGGAGTMEHFLEAFRDADVDGALAA 231 +K KV P +I G + + + ++ VD + Sbjct: 516 YIKYCSVLNSKLYSNKVVNNIQNSNHSLICPSIIGCGDIINFQDYQQHIQNDLVDSVMIG 575 Query: 232 SVFHKQIINIGELKA 246 + E+K Sbjct: 576 RGALLKPWIFTEIKE 590 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 47/158 (29%), Gaps = 23/158 (14%) Query: 34 PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA-------------------EVI 73 + + G D L + T+ + D S++ + + Sbjct: 484 KILNILCDSGIDALTIHGRTSFQRYTKEADWSYIKYCSVLNSKLYSNKVVNNIQNSNHSL 543 Query: 74 DIP-FCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 P G I + +D I + D + I AL P + T + + I Sbjct: 544 ICPSIIGCGDIINFQDYQQHIQNDLVDSVMIGRGALLKPWIFTEIKEN-RNWDISASERF 602 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + + D+ +T+ L+++ + Sbjct: 603 DIIKQYVNLGLEHWGTDKRGIALTRRFLLEFLSFFHRY 640 >UniRef50_B6K3Q0 tRNA dihydrouridine synthase Dus3 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K3Q0_SCHJY Length = 617 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 15/183 (8%), Positives = 43/183 (23%), Gaps = 22/183 (12%) Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 G+K+ + ++ G D + +N D + Sbjct: 315 GVKTAQVLSEYCD-GLDFLDLNCGCPIDLVYRQGAGSALLDNHTRLIRSLQGIDTISGSL 373 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVR--- 197 + + + L+ ++ + D + +++ Sbjct: 374 PTTVKLRMGCRDDHPIAKRLMTRIFHETNVSAVTLHGRSRQQRYSKLADWDYVRQCATEI 433 Query: 198 ----------------EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 + +I +G T + + + VD + A + Sbjct: 434 RTLNEALEEKPDAFPMRNQRMAVIGNGDCFTYKDWYDGME-TGVDTVMIARGALVKPWIF 492 Query: 242 GEL 244 E+ Sbjct: 493 EEI 495 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 22/186 (11%), Positives = 51/186 (27%), Gaps = 30/186 (16%) Query: 10 LDVRDG---QVVKGVQFRNHEIIGDIVP---LAKRYAEEGADELVFYDITASS-DGRVVD 62 +D G VK + + + + E + + + ++ D Sbjct: 366 IDTISGSLPTTVKLRMGCRD---DHPIAKRLMTRIFHETNVSAVTLHGRSRQQRYSKLAD 422 Query: 63 KSWVSRVAEVID-------------------IPFCVAGGIKSLEDAAKILSFGADKISIN 103 +V + A I + G + +D + G D + I Sbjct: 423 WDYVRQCATEIRTLNEALEEKPDAFPMRNQRMAVIGNGDCFTYKDWYDGMETGVDTVMIA 482 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 AL P + + + E + ++ + DE T+ L+++ Sbjct: 483 RGALVKPWIFEEI-EARQSIDKSSTQRLEMLQEFCNHGLSYWGADERGLNTTRRFFLEFM 541 Query: 164 QEVQKR 169 + Sbjct: 542 SFFHRY 547 >UniRef50_UPI000180C428 PREDICTED: similar to tRNA-dihydrouridine synthase 2-like (hDUS2) (Up-regulated in lung cancer) (URLC8) n=1 Tax=Ciona intestinalis RepID=UPI000180C428 Length = 482 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 33/98 (33%), Gaps = 4/98 (4%) Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHV 202 + R +TL+ V+ ++ G + ++ + + +K + E + Sbjct: 196 IPVTCKIRILPEIDKTLELVRIIESTGVAALAVHGRYKHERPRHPVHCDVIKAITETVKI 255 Query: 203 PLIASGG---AGTMEHFLEAFRDADVDGALAASVFHKQ 237 P+IA+GG + + + + A Sbjct: 256 PVIANGGSSNIACYDDIEKFRASTNASSVMLARSAQWN 293 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 46/181 (25%), Gaps = 30/181 (16%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VV 61 RI+P +D + L + G L + R V Sbjct: 201 KIRILPEID-------------------KTLELVRIIESTGVAALAVHGRYKHERPRHPV 241 Query: 62 DKSWVSRVAEVIDIPFCVAGG---IKSLEDAAKI-LSFGADKISINSPALADPTLITRLA 117 + + E + IP GG I +D K S A + + A + ++ + Sbjct: 242 HCDVIKAITETVKIPVIANGGSSNIACYDDIEKFRASTNASSVMLARSAQWNCSVFRKEG 301 Query: 118 D------RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 I + D Y + E+ +L + G Sbjct: 302 PLPLDVVIKDYIKIAIQYDNHYINCKFCILEMMHETQETEAGKQVRSSLSLHEICNAWGM 361 Query: 172 G 172 Sbjct: 362 S 362 >UniRef50_Q2SJJ8 TRNA-dihydrouridine synthase n=7 Tax=Gammaproteobacteria RepID=Q2SJJ8_HAHCH Length = 349 Score = 73.7 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 59/195 (30%), Gaps = 22/195 (11%) Query: 70 AEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 AE I + G E A +G D+I++N +D + Sbjct: 69 AEEHPIAVQLGGSNPDELKECAKICEDWGYDEINLNVGCPSDRVQNNMIGACLMGYP--E 126 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRV--TQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + A + ++ L++V+ V+ G +++ Sbjct: 127 RVAECVAAMCSAVSIPVTVKHRIGIDDQDSEEFLLNFVRTVKAAGCSTFIIHARKAILKG 186 Query: 186 NGYDLE------------QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +K+ + +I +GG TM+ ++ VDG + Sbjct: 187 LSPKENREIPPLIYPRAYLIKQT--FPELEIIINGGIKTMDESESHLQE--VDGVMIGRE 242 Query: 234 FHKQIINIGELKAYL 248 +++ + ++ L Sbjct: 243 AYQRPWMLADVDHRL 257 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 15/118 (12%), Positives = 37/118 (31%), Gaps = 12/118 (10%) Query: 18 VKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG--RVVDKSW-------VS 67 VK + + + + + G + + A G ++ Sbjct: 145 VKHRIGIDDQDSEEFLLNFVRTVKAAGCSTFIIHARKAILKGLSPKENREIPPLIYPRAY 204 Query: 68 RVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 + + + + GGIK+++++ L D + I A P ++ + R Sbjct: 205 LIKQTFPELEIIINGGIKTMDESESHLQE-VDGVMIGREAYQRPWMLADVDHRLFHCP 261 >UniRef50_Q4SBU2 Inosine-5'-monophosphate dehydrogenase (Fragment) n=2 Tax=Clupeocephala RepID=Q4SBU2_TETNG Length = 571 Score = 73.7 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 64/221 (28%), Gaps = 16/221 (7%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEV-IDIPFCVAGG 82 + + D + G D + +S V S ++ + + D+ V G Sbjct: 257 DDDKYRLD------LLVQAGVD---VVVLDSSQGNSVFQISMINYIKQKYADLQV-VGGN 306 Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + + A ++ G D + + + + + + + Sbjct: 307 VVTAAQAKNLIDAGVDALRVGMGCGSICITQEGNHPCCLLDLGINPHVCQKELLSVMSAQ 366 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV 202 + + + + LN + G G + ++ + V Sbjct: 367 PASSVVTGPPLGHCYSAI----FALAAPPHILDLNHVMACGRPQGTSVYKVAEYARRFSV 422 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 P+IA GG T+ H ++A + S+ GE Sbjct: 423 PVIADGGIQTVGHVVKAL-SLGASTVMMGSLLAATTEAPGE 462 >UniRef50_B9YRZ8 Indole-3-glycerol-phosphate synthase n=3 Tax=Nostocaceae RepID=B9YRZ8_ANAAZ Length = 291 Score = 73.0 bits (178), Expect = 9e-12, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 69/232 (29%), Gaps = 40/232 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +AK Y GA + G + + I +P I Sbjct: 84 DPLAMAKSYERGGATCISVVTDQKFFQGG---FDHLRTIRHRIALPLLCKDFILDPCQIY 140 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 S GAD + + + L D + V Y G + Sbjct: 141 LARSAGADAVLLIAAILTDQEI------------------------NNFLRVIHYLGMNA 176 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV-------REVCHVP 203 V LD + +++ I +N + + +L +++ + + Sbjct: 177 ILEVHNLTELDRLLKLED--VRIISINNRSLEDFS--VNLSTTQQLMAARRSHLQNLGIL 232 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +++ G T +H DA V+ L +Q N+ E L V + Sbjct: 233 VVSESGIETSDHLS-LMADAGVNAVLMGDSLLQQE-NLEEAVRSLIKPNVPV 282 >UniRef50_UPI0000E479FB PREDICTED: similar to MGC108441 protein n=9 Tax=Strongylocentrotus purpuratus RepID=UPI0000E479FB Length = 497 Score = 73.0 bits (178), Expect = 9e-12, Method: Composition-based stats. Identities = 29/240 (12%), Positives = 60/240 (25%), Gaps = 37/240 (15%) Query: 32 IVPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVI---DIPFCVAGGIKSL 86 A A G D ++ + + ++ V E + + + GG+++ Sbjct: 237 TAESASDAANAGVDGILVSAHGG-RQLESSPAPIDALAEVVEAVHGRGVEIYMDGGVRTG 295 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI----------------- 129 D K L GA + + P L + + Sbjct: 296 TDVFKALGRGARAVFLGRPILWGLACQNNIPCFSFCIQSMPVYEADIPSARAAKQESIKN 355 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETL-------DWVQEVQKRGAGEIVL--NMMN 180 Y E + +VT + + + G I++ + Sbjct: 356 HFEYLREMQYNPKATWEYIRWIKKVTSLPVVCKGILTAESASDAANAGVDGILVSAHG-G 414 Query: 181 QDGVRNGYDLEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + + ++ L +V E V + GG T +A Sbjct: 415 RQQESSPAPIDALAEVVEAVHGRGVEVYMDGGVRTGTDVFKALGR-GARAVFLGRPILWG 473 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 69/243 (28%), Gaps = 43/243 (17%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI----NSPALA 108 ++ + +V +P G I + E A+ + G D I + + Sbjct: 206 DEMESNPKATWEYIRWIKKVTSLPVVCKG-ILTAESASDAANAGVDGILVSAHGGRQLES 264 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 P I LA+ V + G +R L + Sbjct: 265 SPAPIDALAEVVEAVHGRGVEIYMDGGVRTGTDVFKALGRGARAVFLGRPILWGLACQNN 324 Query: 169 RGAGEIVLNMMN------------------------QDGVRNG-YDLEQLKKVREVCHVP 203 + M ++ N E ++ +++V +P Sbjct: 325 IPCFSFCIQSMPVYEADIPSARAAKQESIKNHFEYLREMQYNPKATWEYIRWIKKVTSLP 384 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI---------INIGELKAYLATQGVE 254 ++ G T E +A +A VDG L H + E+ + +GVE Sbjct: 385 VVCKG-ILTAESASDA-ANAGVDGILV--SAHGGRQQESSPAPIDALAEVVEAVHGRGVE 440 Query: 255 IRI 257 + + Sbjct: 441 VYM 443 >UniRef50_A4RZE7 Predicted protein n=4 Tax=cellular organisms RepID=A4RZE7_OSTLU Length = 355 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 54/204 (26%), Gaps = 22/204 (10%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +AK Y E GA L G + + + + P I Sbjct: 156 DPVKIAKAYEEGGAACLSVLTDEKFFQGGFENLALIRE--AGVTCPLLCKEFIVDAYQIY 213 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 +GAD I + + L + L + + + Y + Sbjct: 214 LARKYGADAILLIAAVLPNQDLKYFIKIAHSLGMKCLIEVHTYGEMKRVLDGDFPIDL-- 271 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 + G E+ L + D + E + + ++ G Sbjct: 272 -----------LGINNRDLGTFEVSL-SVTTDLMNGPLGEE-----VKRRGITMVGESGI 314 Query: 211 GTMEHFLEAFRDADVDGALAASVF 234 T++ +D+ V L Sbjct: 315 FTIDDV-NLLQDSGVGAVLVGESL 337 >UniRef50_P40545 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=25 Tax=Dikarya RepID=HIS4_YEAST Length = 261 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 78/244 (31%), Gaps = 29/244 (11%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP-----------LAKRYAEEGADELVF 49 M I C+D+ +G+V + V D+ AK Y + Sbjct: 1 MTKF--IGCIDLHNGEVKQIVGGTLTSKKEDVPKTNFVSQHPSSYYAKLYKDRDVQGCHV 58 Query: 50 YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL-A 108 + + + V GGI + + L + A K+ + S Sbjct: 59 IKL------GPNNDDAAREALQESPQFLQVGGGIND-TNCLEWLKW-ASKVIVTSWLFTK 110 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + + +R C I + ++ +T D +E++K Sbjct: 111 EGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRK 170 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC----HVPLIASGGAGTMEHFL--EAFRD 222 E +++ + +G+ G D + K+ E + ++ +GGA +++ + Sbjct: 171 Y-TNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSH 229 Query: 223 ADVD 226 VD Sbjct: 230 GKVD 233 >UniRef50_A4YHD8 Indole-3-glycerol phosphate synthase n=13 Tax=Sulfolobaceae RepID=TRPC_METS5 Length = 250 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 74/258 (28%), Gaps = 56/258 (21%) Query: 5 RIIPCLDVRDGQVVKGVQ-------FRNHEIIG-----DIVPLAKRYAEEGADELVFYDI 52 +IIP + + VKG ++ G D + AK + GA + Sbjct: 32 QIIPRI-----RAVKGAGLNPVIAEYKRKSPSGFSEDRDPISYAKSMEQGGAVAISVITE 86 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 G ++ R+A + IP + + S GAD + + L + L Sbjct: 87 NTVFGGS---YEYLERIARNVKIPLLMKDFVVSENQVDTAYDLGADFVLLIVRILTEREL 143 Query: 113 IT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 +G++ +V D + + + G Sbjct: 144 SGLLEYVRSYGMEALVEVHDR-----------------------------EDLDIALRSG 174 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL--IASGGAGTMEHFLEAFRDADVDGA 228 A I +N D E K+ E + +A G + E R+ D Sbjct: 175 ASLIGVNSR--DLFSLTIQKEMAMKLLEQIPSTVTKVAESGIESAEEI-RLLREKGADAF 231 Query: 229 LAASVFHKQIINIGELKA 246 L S + I E Sbjct: 232 LIGSSLMRNPDKIKEFVQ 249 >UniRef50_A5DTS1 tRNA-dihydrouridine synthase 3 n=2 Tax=Saccharomycetales RepID=DUS3_LODEL Length = 642 Score = 73.0 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 49/178 (27%), Gaps = 23/178 (12%) Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 +I++N D L + + I + + + Sbjct: 356 LHVSEINLNCGCPIDL-LFKQGQGSALLDSPPRLIRIVKAMNASSGDIPVTIKIRTGVKE 414 Query: 155 TQWETLDWV-QEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV---------- 202 + + V + +++ I L+ ++ D + +++V +V Sbjct: 415 NKNTAVHLVNRVLEETQVAAITLHGRSRQQRYTKEADWDYIEEVGKVVKTWNEKREDEDK 474 Query: 203 ------P--LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG--ELKAYLAT 250 P + +G + E + VD + A + E + YL Sbjct: 475 EGRDTNPTWFVGNGDVYSHEDWYNGVNREGVDSVMVARGALIKPWIFEEVEAQQYLDK 532 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 24/211 (11%), Positives = 54/211 (25%), Gaps = 42/211 (19%) Query: 4 KRIIPCLDVRDG---QVVKGVQFRNHEIIGDIVPLA-KRYAEEGADELVFYDITASS-DG 58 RI+ ++ G +K V L + E + + + Sbjct: 389 IRIVKAMNASSGDIPVTIKIRTGVKENKNT-AVHLVNRVLEETQVAAITLHGRSRQQRYT 447 Query: 59 RVVDKSWVSRVAEVI------------------DIPFCVAGGIKSLEDAAK-ILSFGADK 99 + D ++ V +V+ F G + S ED + G D Sbjct: 448 KEADWDYIEEVGKVVKTWNEKREDEDKEGRDTNPTWFVGNGDVYSHEDWYNGVNREGVDS 507 Query: 100 ISINSPALADPTLITR----------------LADRFGVQCIVVGIDTWYDAETGKYHVN 143 + + AL P + + +++ + Y + + Sbjct: 508 VMVARGALIKPWIFEEVEAQQYLDKSSTERLAMLEKYAKYAVEHWGSDEYGVSNARRFMC 567 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 ++ R ++ +R I Sbjct: 568 EFLSFTHRYVPVGI-LERLPAKLNERPPKWI 597 >UniRef50_D1YXT1 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YXT1_METPS Length = 376 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 19/125 (15%) Query: 1 MLAKRIIPCL-----DVRDGQVV---KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI 52 ML RI L D++ VV K D V LA+ + G D L Sbjct: 136 MLKDRI--ALARLVSDIKKTGVVLSLKMRSG-----AVDDVKLARILEKAGLDILHV--- 185 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 A R + + + ++ + + + + E A + S G+D +S+ A+A+P L Sbjct: 186 DAMGM-RGTNLNAIKKLRDSTTLFIIGNNSVNNYETAQAMYSAGSDMVSVARAAMANPKL 244 Query: 113 ITRLA 117 I + Sbjct: 245 IKGIV 249 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 5/95 (5%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + + + ++K G + ++ M G +L +KK+R+ + +I + E Sbjct: 166 VDDVKLARILEKAGLDILHVDAMG----MRGTNLNAIKKLRDSTTLFIIGNNSVNNYETA 221 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 A D A I + +Y+ Q Sbjct: 222 QAM-YSAGSDMVSVARAAMANPKLIKGIVSYIEDQ 255 >UniRef50_D2MIW0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIW0_9BACT Length = 104 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 41/104 (39%), Gaps = 1/104 (0%) Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 T V++ + +++ ++ +++DG+ G ++ L+ VPLIAS Sbjct: 1 MHGWTNVSESTAEPVLASLKEYPLAGVIFTEISRDGMLEGPNVAALRDAVRASPVPLIAS 60 Query: 208 GGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELKAYLAT 250 GG +E R + G + ++ +++ A Sbjct: 61 GGVTRVEDIRAIKRLGQKIIGVIVGKALYEGTLDLPAALAEARA 104 >UniRef50_A4IM35 Dihydroorotate dehydrogenase n=348 Tax=Bacteria RepID=PYRD_GEOTN Length = 313 Score = 72.6 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 21/114 (18%) Query: 29 IGDIVPLAKRYAEEGADELV------------------FYDITASSDG---RVVDKSWVS 67 + DIV +AK + GAD L + T G + + + Sbjct: 170 VTDIVAMAKAIEQAGADGLTMINTLVGMRIDVKTGRPILANGTGGLSGPAVKPIAVRMIY 229 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V++ + IP GG+++ ED + GA +++ + DP + + + Sbjct: 230 EVSQAVSIPIIGMGGVQTAEDVLEFFYAGASAVAVGTANFIDPFVCPTIINELP 283 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 55/199 (27%), Gaps = 27/199 (13%) Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 E D+P ++E+ ++ + + +++ + + + Sbjct: 90 EQFDVPIIANIAGSTMEEYVEVAAAISKAPNVH-ALELNISCPNVKKGGIAFGTVPEVAA 148 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL------------NM 178 V Y + + + +++ GA + + Sbjct: 149 ELTRLVKEVSAVPVYVK----LSPNVTDIVAMAKAIEQAGADGLTMINTLVGMRIDVKTG 204 Query: 179 M----NQDGVRNGYDLEQLK-----KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 N G +G ++ + +V + +P+I GG T E LE F A Sbjct: 205 RPILANGTGGLSGPAVKPIAVRMIYEVSQAVSIPIIGMGGVQTAEDVLEFF-YAGASAVA 263 Query: 230 AASVFHKQIINIGELKAYL 248 + + L Sbjct: 264 VGTANFIDPFVCPTIINEL 282 >UniRef50_Q88KX0 tRNA-dihydrouridine synthase A n=482 Tax=Bacteria RepID=DUSA_PSEPK Length = 336 Score = 72.2 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 22/217 (10%), Positives = 62/217 (28%), Gaps = 19/217 (8%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKILS-FGADKISINSPALADP 110 T + ++ A + + G + L A++ G D++++N +D Sbjct: 53 TGALLHNDAH-RFLRHDASEHPLALQLGGSVPADLAACARLAEEAGYDEVNLNVGCPSDR 111 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR--VTQWETLDWVQEVQK 168 + + + + D + E D+V +V++ Sbjct: 112 -VQNNMIGACLMAHPALVADCVKAMRDAVST-PVTVKHRIGINGRDSYAELSDFVGQVRE 169 Query: 169 RGAGEIVLNMMNQDGVRNGYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLE 218 G ++ + +++ + + ++ +GG T++ Sbjct: 170 AGCRSFTVHARIAILEGLSPKENREIPPLRYDIAAQLKRDFPDLEIVLNGGIKTLDECQA 229 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 DG + + + E+ L + Sbjct: 230 HLET--FDGVMLGREAYHNPYLLAEVDQQLFGSDAPV 264 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 12/110 (10%) Query: 18 VKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVS 67 VK N + + E G + A +G + + Sbjct: 145 VKHRIGINGRDSYAELSDFVGQVREAGCRSFTVHARIAILEGLSPKENREIPPLRYDIAA 204 Query: 68 RVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 ++ D+ + GGIK+L++ L D + + A +P L+ + Sbjct: 205 QLKRDFPDLEIVLNGGIKTLDECQAHLET-FDGVMLGREAYHNPYLLAEV 253 >UniRef50_B8LBY8 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LBY8_THAPS Length = 242 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 5/106 (4%) Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-----NQDGVRNGYDLEQLKKVR 197 TLD+V+ + K GA I ++ + R +E +++++ Sbjct: 137 PVSAKIRLLDPDNPKPTLDFVRALIKAGANAIAIHGRIVGDESHTMARWETLIEVVRQLK 196 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + VP+I +G T E DG + A I + Sbjct: 197 QTESVPIIVNGDLYTRADIQEMKSRTGCDGVMLARPALYNISIFRK 242 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 9/100 (9%) Query: 25 NHEIIGDI---VPLAKRYAEEGADELVFYDI-TASSDGRVVDKS----WVSRVAEVIDIP 76 + + + + GA+ + + + V ++ + +P Sbjct: 143 RLLDPDNPKPTLDFVRALIKAGANAIAIHGRIVGDESHTMARWETLIEVVRQLKQTESVP 202 Query: 77 FCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITR 115 V G + + D ++ G D + + PAL + ++ + Sbjct: 203 IIVNGDLYTRADIQEMKSRTGCDGVMLARPALYNISIFRK 242 >UniRef50_C2KW54 Dihydrouridine synthase, DuS n=1 Tax=Oribacterium sinus F0268 RepID=C2KW54_9FIRM Length = 323 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 31/94 (32%), Gaps = 2/94 (2%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 T E + EI+++ Q +G +L + + + +PL+ +G T Sbjct: 142 NTDGEWEELFAVFNHFPFSEIIVHPRTQKQYYSGRVNLHCFQNICKYSKLPLVYNGDVET 201 Query: 213 MEHFLEAFRD-ADVDGALAASVFHKQIINIGELK 245 E L ++ G + E + Sbjct: 202 REDILFLQEQFPEIQGIMCGRGLLSNPALFREAR 235 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 3/76 (3%) Query: 44 ADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKI 100 E++ + T V+ + + +P G +++ ED + I Sbjct: 159 FSEIIVHPRTQKQYYSGRVNLHCFQNICKYSKLPLVYNGDVETREDILFLQEQFPEIQGI 218 Query: 101 SINSPALADPTLITRL 116 L++P L Sbjct: 219 MCGRGLLSNPALFREA 234 >UniRef50_B8HZU1 Photosystem I assembly BtpA n=5 Tax=Clostridiales RepID=B8HZU1_CLOCE Length = 262 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 75/247 (30%), Gaps = 29/247 (11%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVF---------YDITASSDGRVVDKSWVSRVAEVI 73 +I V A + G D ++ ++ + S + VA+ + Sbjct: 29 GDMKKITDQAVKEAITLEKSGMDAIIIENMGDNVFGVNMDIEQSCALAAISAI--VAQNV 86 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +IP + + + A I GAD + I + + + Sbjct: 87 NIPIGIDAAMNDYKTALSIAKAIGADFVRIP-VFVDTVEFFGGIIQ--PCAREAMKFRKN 143 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 +AE K + D + + GA I++ GV D Sbjct: 144 IEAENVKIFADIQVKHTHMVLP-HVSIEDSAKAAEACGADAIIVTG-THIGVETPID--I 199 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDAD-VDGALAASVF-----HKQIINIGELKA 246 +K+V++V +P+IA G T DGA+ S K I++ Sbjct: 200 IKRVKKVISIPVIAGSGVKT----NNIKEQLGIADGAIVGSSLKEGGNIKNPISLELCTE 255 Query: 247 YLATQGV 253 + + Sbjct: 256 LIKALNI 262 >UniRef50_C5X8Y0 Putative uncharacterized protein Sb02g020430 n=1 Tax=Sorghum bicolor RepID=C5X8Y0_SORBI Length = 403 Score = 71.8 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 72/230 (31%), Gaps = 31/230 (13%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D V +A+ Y + GA L G + V ++ P + + Sbjct: 200 RDHFDPVEIAQAYEKNGAACLSILTDEKHFQGSFENLEAVRN--SGVNCPLLCKEFVIDV 257 Query: 87 EDAAKILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 S GAD I + + L D + R+ G+ +V D K + Sbjct: 258 WQIYYARSKGADAILLIAAVLPDIDITYFLRVCKSLGMTALVEVHDEKELDRVLKIDGVE 317 Query: 145 YTGDESRTRVTQW-ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 G +R+ T +T + ++KRG + + + Sbjct: 318 LIGINNRSLGTFEVDTANTNMLLEKRG------------------------DIIKKKRIQ 353 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +++ G T + ++A V L Q + G+ A L + + Sbjct: 354 VVSESGLFTPDDV-AYVQNAGVFAVLVGESLVTQE-DPGQAIAGLFGKEL 401 >UniRef50_A4HJH5 Dihydrouridine synthase (Dus), putative n=3 Tax=Leishmania RepID=A4HJH5_LEIBR Length = 666 Score = 71.4 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 6/85 (7%) Query: 35 LAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVID--IPFCVAGGIKSLED- 88 A+ + GA L + T G + + RV + IP G +++ +D Sbjct: 391 YARMIRDAGAQVLCIHGRTREMKGQHTGTANMELIRRVRLALSGTIPVISNGNVRTYDDV 450 Query: 89 AAKILSFGADKISINSPALADPTLI 113 A + + P L DP L Sbjct: 451 IAHLQETRCEGHMCAEPLLWDPKLF 475 Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 24/200 (12%), Positives = 60/200 (30%), Gaps = 30/200 (15%) Query: 54 ASSDGR--VVDKSWVSRVAE----VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 G + D + + +++P V + D+ A Sbjct: 296 RGHYGSFLMEDWESIHTIVHTLHVELEVPVTVKIRVF-------------DRPGHAEAAD 342 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 D T + V+ A G G + T+ + + ++ Sbjct: 343 NDHECATHCSPAACVEEEEEDAAAAATAVVGTLPKPLEEGFDEAL------TILYARMIR 396 Query: 168 KRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRD 222 GA + ++ ++ ++E +++VR +P+I++G T + + ++ Sbjct: 397 DAGAQVLCIHGRTREMKGQHTGTANMELIRRVRLALSGTIPVISNGNVRTYDDVIAHLQE 456 Query: 223 ADVDGALAASVFHKQIINIG 242 +G + A Sbjct: 457 TRCEGHMCAEPLLWDPKLFS 476 >UniRef50_Q3ABS1 Indole-3-glycerol phosphate synthase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=TRPC_CARHZ Length = 264 Score = 71.4 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 72/221 (32%), Gaps = 37/221 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D +A+ YA+ GA + +T ++ V V+ +P I Sbjct: 76 DPEEVAQVYAKSGAAAISV--LTEEDYFLGS-PEYLKAVRAVVSLPILRKDFILDPYQIY 132 Query: 91 KILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD + + + LA L + ++ + G++ +V Sbjct: 133 EAKVLGADAVLLITSLLASVELKEMIKITEGLGMEALVEAHS------------------ 174 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVCHVPLIAS 207 L+ V++ GA I +N + D+ L V + V +++ Sbjct: 175 -----------LEEVEKALTAGARLIGINNRDLRTFATNIDVSLKLAPVLKEAGVVMVSE 223 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 G + E +A A G L + + G+ L Sbjct: 224 SGIRSKEDI-KALMTAGYHGILIGEALVRAP-DPGKALEVL 262 >UniRef50_A4AAB0 tRNA-dihydrouridine synthase C n=6 Tax=Gammaproteobacteria RepID=A4AAB0_9GAMM Length = 328 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 53/187 (28%), Gaps = 8/187 (4%) Query: 74 DIPF---CVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 +P + G E+A++ GA + +N A + + V Sbjct: 68 GVPVYLQILGGDPSVVAENASRAAELGAPGVDLNFGCPAKTVNRSDGGSIILREPERVHR 127 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 + V + LD V + E+V++ + Sbjct: 128 IVAATRQALPPSVPLSVKIRLGFDSSDR-FLDIVSGIDAARPSELVIHARTRADGYRPPA 186 Query: 190 -LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 E + R +PLIA+G + A + + + L+A Sbjct: 187 YWEHIALARSKTRLPLIANGEIWGVGDAKLAREKSGTRDLMLGRGVLCRPDLPRLLRAA- 245 Query: 249 ATQGVEI 255 GVE+ Sbjct: 246 -DSGVEV 251 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 27/99 (27%), Gaps = 4/99 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + + + ELV + T + R ++ +P Sbjct: 144 VKIRLGFDSSDRF--LDIVSGIDAARPSELVIHARTRADGYRPPAYWEHIALARSKTRLP 201 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 G I + DA G + + L P L Sbjct: 202 LIANGEIWGVGDAKLAREKSGTRDLMLGRGVLCRPDLPR 240 >UniRef50_Q06053 tRNA-dihydrouridine synthase 3 n=11 Tax=Saccharomycetaceae RepID=DUS3_YEAST Length = 668 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 19/177 (10%), Positives = 48/177 (27%), Gaps = 27/177 (15%) Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 I++NS D L + + + I + + T+ Sbjct: 380 INLNSGCPIDL-LYRQGSGSALLDNPARMIRCLNAMNYVSKDIPITVKIRTGTKEGHPIA 438 Query: 160 LDWVQEVQ-KRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH---------------- 201 V+ + + I L+ ++ D + + +V + Sbjct: 439 EGLVKRLVNETDVAAITLHGRSRQQRYTKSADWDYVSQVADTLRSAEADFIETEQGKEGR 498 Query: 202 -----VPLIASGGAGTMEHFLEAFR-DADVDGALAASVFHKQIINIGEL--KAYLAT 250 + + +G E + + ++D + A + E+ + YL Sbjct: 499 DSKNRIQFVGNGDVNNFEDWYRYLNGNENIDSVMVARGALIKPWIFEEVESQQYLDK 555 >UniRef50_Q3ZZ14 Indole-3-glycerol phosphate synthase n=5 Tax=Dehalococcoides RepID=TRPC_DEHSC Length = 259 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 73/257 (28%), Gaps = 47/257 (18%) Query: 7 IPCLDV---RDGQVVKGVQFRNH--------EIIGDIVPLAKRYAEEGADELVFYDITAS 55 P +D+ G+ V+ + D V +A YA GA + Sbjct: 35 YPPIDMAMKLKGRQVRLIAEVKKASPSKGIIRSDFDPVDIAGIYARNGASAISVLTEEHH 94 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 G + + + +P I + +GAD I + A+ P + Sbjct: 95 FMGSLDNLKKIRESGVASKLPLLRKDFIHDPYQVYESRLYGADAILLI-VAMLSPERLQE 153 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 L ++ G + V L+ + A I Sbjct: 154 LL-----------------------SLSHKLGMKCLVEVHTRSELEIAL---ESNARIIG 187 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVP----LIASGGAGTMEHFLEAFRDADVDGALAA 231 LN D DL +++R + +P +++ G T + VD L Sbjct: 188 LNNR--DLHTFKIDLTVTERLRPL--IPPECIVVSESGIQTRADISR-LEELGVDAVLVG 242 Query: 232 SVFHKQIINIGELKAYL 248 + +++ L Sbjct: 243 EALTASVDIAAKMRELL 259 >UniRef50_A7I924 Histidine biosynthesis n=3 Tax=Methanomicrobiales RepID=A7I924_METB6 Length = 238 Score = 71.4 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 73/254 (28%), Gaps = 42/254 (16%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKR--YAEEGA------DELVFYDITA 54 ++ LD++ VV G + + G L D+ Sbjct: 13 TMELVLALDLQHNMVVHGKSGQRATY--KPLDWGLSPTAEPIGFVKATAPKFLYIADLDR 70 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 +G+ + + A++++ V G+++ D L P L Sbjct: 71 -IEGKGNHDALIRGCADLVE-RCYVDRGVQTPSD-----------------LLTGPHLKN 111 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + + + + + T ++E + Sbjct: 112 IIGTETSLAKLSQYHGGYLSIDV----------MNGKVIPTGDSPESVLREARGWDFEGC 161 Query: 175 VLNMMNQDGVRNGY--DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +L + G NG L R L+ GG + + ++A DGA+ A+ Sbjct: 162 ILLNLGFVGTENGIGEGTGPLAAWRSAYPGRLLYGGGVASPADL-DTIKNAGFDGAIIAT 220 Query: 233 VFHKQIINIGELKA 246 HK + ++ Sbjct: 221 ALHKGAVPAEAIRR 234 >UniRef50_Q54QJ2 tRNA-dihydrouridine synthase 2-like protein n=1 Tax=Dictyostelium discoideum RepID=Q54QJ2_DICDI Length = 402 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 54/173 (31%), Gaps = 14/173 (8%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + +AAK++ + IN ++ + + + Sbjct: 114 TALEAAKVVCNDICALDINMGCPKFFSVQGGMGSALLSKPETIKDILTTLKRNLN---GI 170 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCH-- 201 + R T ET+D ++ ++ G I ++ ++L+ + Sbjct: 171 PITCKIRLLSTDQETIDLLRIIESTGVSAIGVHCRMIPERPRDPAHWDRLENILSNASFS 230 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ--------IINIGELKA 246 VP+IA+G + + VD + A K I++ ++ Sbjct: 231 VPIIANGDIFEHADIEKIKKQTKVDSIMIARGVVKNVSIFSKPSPIDLKQIIQ 283 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 25/89 (28%), Gaps = 4/89 (4%) Query: 31 DIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEV--IDIPFCVAGGIKSLE 87 + + L + G + + + + +P G I Sbjct: 184 ETIDLLRIIESTGVSAIGVHCRMIPERPRDPAHWDRLENILSNASFSVPIIANGDIFEHA 243 Query: 88 DAAKILS-FGADKISINSPALADPTLITR 115 D KI D I I + + ++ ++ Sbjct: 244 DIEKIKKQTKVDSIMIARGVVKNVSIFSK 272 >UniRef50_B3RND8 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RND8_TRIAD Length = 519 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 15/160 (9%), Positives = 44/160 (27%), Gaps = 8/160 (5%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA+ + D I + + V + ++ Sbjct: 98 QAAERVDSLCDAIDLTL----HSETNAKTILNQAVGKDFQLLQRMISLLRDNLNMPVACK 153 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 + + + + ++ G + + +++ D +K V++ +P+ A Sbjct: 154 IKIAADKDSSSLIKYAKRLESAGCQLLSIGCRHKEPRFRLDDWNIVKAVKDSVVIPVFAC 213 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 T+ G ++ H + ++K Sbjct: 214 SDISTLAEADLCLEYTGAQGIMS----HDTELYYRQIKTI 249 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 1/77 (1%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 + ++ AKR G L R+ D + V V + + IP I + Sbjct: 159 DKDSSSLIKYAKRLESAGCQLLSIGCRHKEPRFRLDDWNIVKAVKDSVVIPVFACSDIST 218 Query: 86 LEDAAKILS-FGADKIS 101 L +A L GA I Sbjct: 219 LAEADLCLEYTGAQGIM 235 >UniRef50_B0EBU6 tRNA-dihydrouridine synthase, putative n=4 Tax=Entamoeba RepID=B0EBU6_ENTDI Length = 366 Score = 70.7 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 11/186 (5%) Query: 78 CVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 + G +E + K +S I IN + + +V D Sbjct: 95 ILQLGTFDVESSIKCVSLIKEVCGIDINLGCGMWFSTKGEMGQA-----LVSNRDKLEKI 149 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLK 194 + + + R + T ETL+++Q + G I L+ + ++ D +L+ Sbjct: 150 VKALVKLGKPISAKIRLQQTHEETLEFIQWLYSLGISIISLHGRHHKELYGVDCDWVELE 209 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDA-DVDGALAASV--FHKQIINIGELKAYLATQ 251 KV + C LI +G E + +V G + H + N Sbjct: 210 KVVKDCPYDLILNGDICKQEDITKLLSFGKNVRGVMIGRASGIHLGLFNPQGGDYVFDEN 269 Query: 252 GVEIRI 257 ++R+ Sbjct: 270 KTKMRM 275 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 3/87 (3%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVA 80 + R + + + + G + + G D + +V + + Sbjct: 163 KIRLQQTHEETLEFIQWLYSLGISIISLHGRHHKELYGVDCDWVELEKVVKDCPYDLILN 222 Query: 81 GGIKSLEDAAKILSFG--ADKISINSP 105 G I ED K+LSFG + I Sbjct: 223 GDICKQEDITKLLSFGKNVRGVMIGRA 249 >UniRef50_C0SE35 tRNA-dihydrouridine synthase B n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SE35_PARBP Length = 795 Score = 70.3 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 17/198 (8%), Positives = 42/198 (21%), Gaps = 40/198 (20%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 +A L I +N D + Sbjct: 426 ATEALTALCPQLRVIDMNCGCPIDMVFREGSGSALLDH-ASKLEKMLRGMNAVSGEIPIT 484 Query: 146 TGDESRTRVTQWETLDWVQEVQ------------KRGAGEIVLNMMNQDGVRN-GYDLEQ 192 T+ + ++ + G I L+ ++ + D Sbjct: 485 AKIRMGTKDSNPNATKLIERLVLGGVESHEIGQGPAGVAAITLHGRSRQQRYSRQADWGY 544 Query: 193 LKKVREVCH--------------------------VPLIASGGAGTMEHFLEAFRDADVD 226 + + + V + +G + + + R++ VD Sbjct: 545 IGQCAALVKRLNEQINSGTDTAKEADARYQSSAGKVFFLGNGDCYSHDDYFNGIRNSGVD 604 Query: 227 GALAASVFHKQIINIGEL 244 + A + E+ Sbjct: 605 TVMIARGALMKPWIFEEI 622 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 28/106 (26%), Gaps = 28/106 (26%) Query: 42 EGADELVFYDITASS-DGRVVDKSWVSRVA--------------------------EVID 74 G + + + R D ++ + A Sbjct: 520 AGVAAITLHGRSRQQRYSRQADWGYIGQCAALVKRLNEQINSGTDTAKEADARYQSSAGK 579 Query: 75 IPFCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRLADR 119 + F G S +D I + G D + I AL P + ++ Sbjct: 580 VFFLGNGDCYSHDDYFNGIRNSGVDTVMIARGALMKPWIFEEISKG 625 >UniRef50_C5D3D6 Indole-3-glycerol phosphate synthase n=10 Tax=Bacillaceae RepID=TRPC_GEOSW Length = 258 Score = 70.3 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 64/222 (28%), Gaps = 36/222 (16%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK Y + GAD + G + ++S + + + +P I + Sbjct: 63 PVAIAKAYEKAGADAISVLTDERYFQG---HRGYLSDIKQAVQLPILRKDFIIDRIQIEE 119 Query: 92 ILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + GAD I + AL TL + A G++C+V + G Sbjct: 120 SVRIGADAILLIGEALPAKTLYELYQEAYDKGLECLVEVHQRETLENILDIFTPEIIGIN 179 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS-G 208 +R T +L+ +V + V +I S Sbjct: 180 NRDLHTFVTSLETTSKV-----------------------------IPFVPSGSVIVSES 210 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G T + + D L ++ + Sbjct: 211 GISTSHDL-KTVQTYGADAVLVGESLMRKDDVEAAIYELFRE 251 >UniRef50_Q6C002 YALI0F29205p n=1 Tax=Yarrowia lipolytica RepID=Q6C002_YARLI Length = 394 Score = 70.3 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 59/197 (29%), Gaps = 9/197 (4%) Query: 50 YDITASSDGRVVDK--SWVSRVAEVIDIPFCVAGGIKSLE---DAAKILSFGADKISINS 104 D T S G+ + + + R +E G + E A K+++ I +N Sbjct: 57 VDFTVSQQGKGNTEKKAIIFRTSEAERDKIIFQVGSANPEIAVAACKMVAKDVAGIDLNC 116 Query: 105 PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 ++ + + + N + R T+ +TL+ V Sbjct: 117 GCPKHFSMHAGMGAALLKTPDKLVAILEALVKEVGEPFNVSISVKIRLLETEEKTLELVD 176 Query: 165 EVQKRGAGEIVLNMMNQDGVRNGY----DLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + + G + ++ L ++ +V + + +G + Sbjct: 177 RLAQTGVKNLTIHCRTTPMRPREPVIRDTLAKVAEVCHKHGITCLVNGDVEGRHELADLQ 236 Query: 221 RDADVDGALAASVFHKQ 237 +DGA+ A Sbjct: 237 EKYGIDGAMIARAAEAN 253 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 53/155 (34%), Gaps = 5/155 (3%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVI---DI 75 V+ R E + L R A+ G L + T R V + +++VAEV I Sbjct: 159 SVKIRLLETEEKTLELVDRLAQTGVKNLTIHCRTTPMRPREPVIRDTLAKVAEVCHKHGI 218 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 V G ++ + A + +G D I A A+ + Q +D + Sbjct: 219 TCLVNGDVEGRHELADLQEKYGIDGAMIARAAEANASCFRAEGMLPWQQVTKEYLDICRE 278 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + + ++ + +++ + Sbjct: 279 YDNFYQNTKYCLTRMIPGKSPSYKKVAALKDCESL 313 >UniRef50_A7EKL8 tRNA-dihydrouridine synthase 3 n=10 Tax=Leotiomyceta RepID=DUS3_SCLS1 Length = 750 Score = 70.3 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 19/192 (9%), Positives = 49/192 (25%), Gaps = 38/192 (19%) Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 + + GA S L P+ + ++ V + A+ Sbjct: 446 DLNCGCPIELVYRQGA-----GSALLDAPSKLEKMIRGMN----AVSGEVPITAKIRMGT 496 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC 200 + + ++ + + G I L+ ++ D + + + Sbjct: 497 MTGKPTALKTIERLAFGGVESRERLGAPGCAAITLHGRSRQQRYTKNADWSYIAECAALV 556 Query: 201 H----------------------------VPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + I +G + +L+ ++A VD + A Sbjct: 557 KSYNQKKDDLTDTIMEPDARTLPNAPDGKLHFIGNGDCYSHVDYLDHIQNASVDSVMVAR 616 Query: 233 VFHKQIINIGEL 244 + E+ Sbjct: 617 GALIKPWLFEEI 628 >UniRef50_Q4PIC3 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PIC3_USTMA Length = 364 Score = 69.9 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 21/193 (10%), Positives = 52/193 (26%), Gaps = 19/193 (9%) Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 ++ L +AA+ ++ AD I +N + + Sbjct: 93 AGNNVQQLVEAARRVAPYADAIDLNLGCPQRHAEQGHYGACLLPKQNWPLVAEIVSGMV- 151 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM---NQDGVRNGYDLEQLKK 195 V+ + R V + +T + G+ + ++ + + DL+Q+ K Sbjct: 152 -QAVDVPITTKIRLPVPKEQTAQLAVMLAHAGSSLVTVHPRFASSARRRKGLADLDQVVK 210 Query: 196 VREVC--------------HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 VRE ++++G + + G + + Sbjct: 211 VREALQAQGLLRSAEQPHKDTAVVSNGNVQCWQDVVNNLELTGASGVMVGETLLQNPALF 270 Query: 242 GELKAYLATQGVE 254 + Sbjct: 271 RPALRDCEHARLP 283 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 18/132 (13%) Query: 30 GDIVPLAKRYAEEGADELVFYDI---TASSDGRVVDKSWVSRVAEVI------------- 73 LA A G+ + + +A + D V +V E + Sbjct: 169 EQTAQLAVMLAHAGSSLVTVHPRFASSARRRKGLADLDQVVKVREALQAQGLLRSAEQPH 228 Query: 74 -DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 D G ++ +D L GA + + L +P L + + Sbjct: 229 KDTAVVSNGNVQCWQDVVNNLELTGASGVMVGETLLQNPALFRPALRDCEHARLPTAKEM 288 Query: 132 WYDAETGKYHVN 143 + + + Sbjct: 289 AIEYLDFRDTYD 300 >UniRef50_O67657 Indole-3-glycerol phosphate synthase n=2 Tax=Aquificaceae RepID=TRPC_AQUAE Length = 257 Score = 69.9 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 37/223 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + AK Y + GA + +T + + V E + +P Sbjct: 67 NPEEQAKLYEKAGAIAISV--LTDEKYFKGS-LEDLRNVRESVKLPLLRKDFTVHKVQIL 123 Query: 91 KILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + ++GAD + + L+D L ++ G+ +V Sbjct: 124 EAKAYGADIVLLIVRMLSDKELKELLDFSEELGLSPLV---------------------- 161 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD--LEQLKKVREVCHVPLIA 206 + TLD + GA I +N + + + + E K++++ +I+ Sbjct: 162 -------EVFTLDEAKRALDAGAKIIGINNRDLETFKVDINKTKELAPKIKDLGAKFVIS 214 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G E LE VDG L + K +LK L Sbjct: 215 ESGISKREEILELMNYQ-VDGFLIGTSLMKSENPYRKLKELLG 256 >UniRef50_A1UF85 Pyridoxine biosynthesis protein n=3 Tax=Mycobacterium RepID=A1UF85_MYCSK Length = 322 Score = 69.9 bits (170), Expect = 8e-11, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 64/230 (27%), Gaps = 17/230 (7%) Query: 34 PLAKRYAEEGADELVFYDIT----ASSDG--RVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 A+ GA ++ + + G R+ D + + + + IP I Sbjct: 57 EQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIDAVTIPVMAKARIGHFV 116 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +A + S G D + + +F V + E + Sbjct: 117 EAQILQSLGVDYVDESEVLTPADYTHHIDKWKFTVPFVCGAT---NLGEALRRITEGAAM 173 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-----GYDLEQLKKVREVCHV 202 S+ + + ++K G L +++D + + + +V + Sbjct: 174 IRSKGEAGTGDVSNATTHMRKIGGEIRRLTSLSEDELYVAAKELQAPYDLVAEVARAGKL 233 Query: 203 PL--IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 P+ +GG T +G S K A + Sbjct: 234 PVTLFTAGGIATPADA-AMMMQLGAEGVFVGSGIFKSGNPAERAAAIVKA 282 Score = 42.5 bits (99), Expect = 0.014, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 7/88 (7%) Query: 45 DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV--AGGIKSLEDAAKILSFGADKISI 102 DEL V+ VA +P + AGGI + DAA ++ GA+ + + Sbjct: 208 DELYVAA-----KELQAPYDLVAEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFV 262 Query: 103 NSPALADPTLITRLADRFGVQCIVVGID 130 S R A D Sbjct: 263 GSGIFKSGNPAERAAAIVKATTFYDDPD 290 >UniRef50_B7K0H0 Indole-3-glycerol phosphate synthase n=18 Tax=cellular organisms RepID=TRPC_CYAP8 Length = 293 Score = 69.9 bits (170), Expect = 8e-11, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 71/227 (31%), Gaps = 44/227 (19%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A+ Y + GA L G + + V + +D+P I Sbjct: 100 DPVAIAQAYVKGGASCLSVLTDAKFFQGSFENLALVR---QSVDLPLLCKEFILYPYQIY 156 Query: 91 KILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD + + + L+D L ++ G+ ++ Sbjct: 157 LARTKGADAVLLIAAILSDRDLSYFLKIIQTLGMTALIEVH------------------- 197 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVR-------EVCH 201 + + + G I +N N + DL+ ++ + Sbjct: 198 ---------SLTELDRVLAIEGVSLIGINNRNLETFE--VDLKTTSQLLAARRDKIQALG 246 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + +I+ G T + + + A DG L KQ + + A L Sbjct: 247 IKIISESGLHTPDDL-QFVQQAGSDGVLIGESLVKQP-DPTQAIANL 291 >UniRef50_D1AMN2 Dihydrouridine synthase DuS n=3 Tax=Bacteria RepID=D1AMN2_SEBTE Length = 337 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 24/231 (10%) Query: 44 ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA---AKILSFGA--D 98 A ++ D+ + ++A P +K+ E+ L+ G D Sbjct: 41 AQAIIHGDLERILGFDEAEHPIALQIAATT--PEDAYKAVKTAENYAYDEINLNVGCPSD 98 Query: 99 KI---SINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 ++ + + +A P L+ + GK + Sbjct: 99 RVSGNMMGACLMAYPELVLDILKAIKEATGKAVTIKHRIGIDGKGILPDNAEKT--LFDK 156 Query: 156 QWETLDWVQEVQKRGAGEIVLNMM-------NQDGVRNGYDL---EQLKKVREVCHVPLI 205 + L+++ ++K GA ++ + R L E + E ++ + Sbjct: 157 YEDMLNFINIIEKAGADRYTVHARIAVLAGLDPKQNREVPPLRYDEVYRLKAEKPYMQIE 216 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 +GG T E E + VDG + F+ + + E+ ++ I Sbjct: 217 INGGIKTKEDITEHLKY--VDGVMIGREFYDNPMLLAEVNSFYNNGEENIS 265 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 11/104 (10%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVID-IPFC 78 D++ + GAD + A G + V R+ + Sbjct: 157 YEDMLNFINIIEKAGADRYTVHARIAVLAGLDPKQNREVPPLRYDEVYRLKAEKPYMQIE 216 Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + GGIK+ ED + L + D + I +P L+ + + Sbjct: 217 INGGIKTKEDITEHLKY-VDGVMIGREFYDNPMLLAEVNSFYNN 259 >UniRef50_C9RMC2 Dihydrouridine synthase DuS n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMC2_FIBSS Length = 330 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 53/183 (28%), Gaps = 8/183 (4%) Query: 71 EVIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITR----LADRFGVQCI 125 +IP +A + + A +++ G +I N + + + Sbjct: 69 NAREIPQIIANSVDEFKILADALIAKGYTEIDFNMGCPFPMQVNRHRGAGILNDKQTVQE 128 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 ++ G V T E + + + +I L+ Sbjct: 129 IMDEIRKISNANGTAPVKFSVKMRLGQD-TPDEAFAILPILNEAPLSQITLHPRLGKQQY 187 Query: 186 NG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEA-FRDADVDGALAASVFHKQIINIGE 243 G D + +K E C PL+ +G ++ E R + G + + + Sbjct: 188 KGTIDFKSFEKFYEECRHPLVYNGDITSVSQICEMERRYPKLAGVMIGRGMLARPSMAAD 247 Query: 244 LKA 246 K Sbjct: 248 YKE 250 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 14/153 (9%), Positives = 39/153 (25%), Gaps = 5/153 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK ++ + + E ++ + + +D + E P Sbjct: 149 VKMRLGQDTPD--EAFAILPILNEAPLSQITLHPRLGKQQYKGTIDFKSFEKFYEECRHP 206 Query: 77 FCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 G I S+ ++ + I LA P++ + + C Sbjct: 207 LVYNGDITSVSQICEMERRYPKLAGVMIGRGMLARPSMAADYKELRDINCADPQDFLRKL 266 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + + + + ++ Sbjct: 267 FQMHQIIFDHACKTYQGDSQILSHVQSFWEYLE 299 >UniRef50_A8PLS2 tRNA-dihydrouridine synthase A n=1 Tax=Rickettsiella grylli RepID=A8PLS2_9COXI Length = 330 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 21/187 (11%), Positives = 57/187 (30%), Gaps = 18/187 (9%) Query: 77 FCVAGGI-KSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + GGI L AAKI+ G +I++N + + + + Sbjct: 69 IQLGGGIASDLSKAAKIVESYGYSEINLNVGCPS--EKVQSGGFGVVLLKEPNRVADAIA 126 Query: 135 AETGKYHVNQYTGDESRTR--VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY---- 188 A + + ++++V G +++ Sbjct: 127 AMKAVVRLPVTVKTRIGVDNDESYDYLASFIRQVSLAGCDTFIIHARKAWLHGVSPKENR 186 Query: 189 -----DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + + +++ + H+ ++ +GG ++ + + VD + Sbjct: 187 EIPPLNYPWVYQIKRDFPHLTIVLNGGITCLKRAYQQLQH--VDAVMIGRAAWYNPYLFA 244 Query: 243 ELKAYLA 249 +L A ++ Sbjct: 245 QLDALIS 251 >UniRef50_B5YJH1 Dihydroorotate dehydrogenase n=24 Tax=Bacteria RepID=PYRD_THEYD Length = 303 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 41/112 (36%), Gaps = 21/112 (18%) Query: 35 LAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVSRVAEVI 73 +A+ EEGAD + + +T G R V V VA+ + Sbjct: 176 MARICEEEGADAVSLINTIPAMVIDIKTRKSMIGTLTGGLSGPAIRPVALRAVWEVAQAV 235 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 IP GGI S EDA + L GA I + + +P + + I Sbjct: 236 KIPVIGVGGIVSAEDALQFLIAGAKAIQVGTANFINPIATVEIIEGIKQFLI 287 Score = 54.1 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 5/83 (6%) Query: 175 VLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 L L + +V + +P+I GG + E L+ A + Sbjct: 210 TLTGGLSGPAIRPVALRAVWEVAQAVKIPVIGVGGIVSAEDALQFL-IAGAKAIQVGTAN 268 Query: 235 HKQII----NIGELKAYLATQGV 253 I I +K +L + + Sbjct: 269 FINPIATVEIIEGIKQFLIEENI 291 >UniRef50_P49572 Indole-3-glycerol phosphate synthase, chloroplastic n=39 Tax=cellular organisms RepID=TRPC_ARATH Length = 402 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 68/225 (30%), Gaps = 28/225 (12%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A+ Y + GA L G + + + + P + Sbjct: 201 DPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIR--SAGVKCPLLCKEFVVDPWQIY 258 Query: 91 KILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD + + + LAD + ++ + + +V D + G Sbjct: 259 YARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDEREMGRVLGIEGIELVGI 318 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 +R+ T + +++ + + ++RE + ++ Sbjct: 319 NNRSLETFEVDISNTKKLLEGE------HGR---------------QIRERDMI-VVGES 356 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 G T + + A V L + + + A L + + Sbjct: 357 GLFTPDDI-AYVQAAGVKAVLVGESIV-KQNDPEKGIAGLFGRNI 399 >UniRef50_Q9UTH9 tRNA-dihydrouridine synthase 3 n=1 Tax=Schizosaccharomyces pombe RepID=DUS3_SCHPO Length = 617 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 12/168 (7%), Positives = 36/168 (21%), Gaps = 20/168 (11%) Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 G D + +N D + + Sbjct: 330 GVDFLDLNCGCPIDLVFRQGAGSSLLENPGRLLRNLQGMDAVSGQIPVTVKLRMGNKDDH 389 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH------------- 201 + + L+ ++ + + + + ++ Sbjct: 390 PVVKNLIGRIFNETNTSAATLHGRSRQQRYSKNANWDYIGEIASKVKSMNERIDELPEDS 449 Query: 202 -----VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + LI +G + + + + VD + A + E+ Sbjct: 450 LRTQPLSLIGNGDCYSWQDWYDGVNK-GVDTVMIARGALVKPWIFEEI 496 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 17/174 (9%), Positives = 44/174 (25%), Gaps = 26/174 (14%) Query: 18 VKGVQFRNHEIIGDIVP---LAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI 73 VK V + + + E + + + + ++ +A + Sbjct: 379 VKLRMGNKD---DHPVVKNLIGRIFNETNTSAATLHGRSRQQRYSKNANWDYIGEIASKV 435 Query: 74 ------------------DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + G S +D ++ G D + I AL P + Sbjct: 436 KSMNERIDELPEDSLRTQPLSLIGNGDCYSWQDWYDGVNKGVDTVMIARGALVKPWIFEE 495 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + + + + D T+ L+++ + Sbjct: 496 I-EARQFIDKSSTQRLEMLEQYCNNGLEYWGSDSQGVNTTRRFFLEFMSFFHRY 548 >UniRef50_A9BJH4 Dihydroorotate dehydrogenase n=45 Tax=Bacteria RepID=PYRD_PETMO Length = 300 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 21/115 (18%) Query: 30 GDIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVSR 68 +IV +A+ E GAD L + ITA G + + V Sbjct: 170 ENIVEMAESCVEAGADALSLVNTFPALAIDISKKKAIFDNITAGLSGPCIKPIALRMVYE 229 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 V++ +D+P GGI DA + + GA + + + +P + + Sbjct: 230 VSKAVDVPIIGIGGIMDYRDAIEYIMAGAWAVQVGTANFINPNACAEIIEGIEEY 284 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 34/125 (27%), Gaps = 26/125 (20%) Query: 154 VTQWETLDWVQEVQKRGAGEI------------------VLNMMNQDGVR---NGYDLEQ 192 + ++ + + GA + + + + L Sbjct: 167 PSAENIVEMAESCVEAGADALSLVNTFPALAIDISKKKAIFDNITAGLSGPCIKPIALRM 226 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI----INIGELKAYL 248 + +V + VP+I GG +E A + I ++ YL Sbjct: 227 VYEVSKAVDVPIIGIGGIMDYRDAIEYIM-AGAWAVQVGTANFINPNACAEIIEGIEEYL 285 Query: 249 ATQGV 253 +G+ Sbjct: 286 QKEGI 290 >UniRef50_A9KG09 NIFR3-like protein n=6 Tax=Coxiella burnetii RepID=A9KG09_COXBN Length = 353 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 58/195 (29%), Gaps = 18/195 (9%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLED----AAKILSFGADKISINSPALADPTLIT 114 + + E + V G + A G D+I++N + Sbjct: 69 KGKQWRCLDYSPEEHPLALQVGG--SDPQSLALCARLAEEKGFDEINLNVGCPSGRVTAG 126 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 R + +V + V+ T + + +V+ V + G Sbjct: 127 RFGACLLKEAELVADCVAAMSAEVNIPVSVKTRTGVDDQDSYEHLYHFVKTVAEAGCRIF 186 Query: 175 VLNMMNQDGVRNGYD---------LEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDAD 224 +++ + ++++ + +I +GG T+E + R+ Sbjct: 187 IIHARKAWLKGLSPAENRTVPPLAYPMVYQLKQDFPGLEIIINGGIKTIEAINDHLRE-- 244 Query: 225 VDGALAASVFHKQII 239 VDG + + + Sbjct: 245 VDGVMIGREAYANPL 259 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 12/108 (11%) Query: 18 VKGVQFRNHEII-GDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVS 67 VK + + + K AE G + + A G + V Sbjct: 156 VKTRTGVDDQDSYEHLYHFVKTVAEAGCRIFIIHARKAWLKGLSPAENRTVPPLAYPMVY 215 Query: 68 RVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 ++ + + + GGIK++E L D + I A A+P Sbjct: 216 QLKQDFPGLEIIINGGIKTIEAINDHLRE-VDGVMIGREAYANPLFCA 262 >UniRef50_C5CIM1 N-acylglucosamine-6-phosphate 2-epimerase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM1_KOSOT Length = 239 Score = 69.1 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 76/240 (31%), Gaps = 55/240 (22%) Query: 12 VRDGQVVKGVQFRNHEIIGD--IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 ++ G +V F + GD +V +A GA + R + ++ Sbjct: 9 LKSGLIVSCQAFEGEPLYGDGIMVRMANAAVIGGAKAI-----------RTNGVKDIKQI 57 Query: 70 AEVIDIPFCVAGGIK------------SLEDAAKILSFGADKISINSPALADPTLITRLA 117 E +D+P G IK + ++A ++L GAD ++++ P + + Sbjct: 58 KEALDVPVI--GIIKKHIEGYSVYITPTSKEALEVLEAGADIVALDCTKRPRPEPLKDIF 115 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + + T++ + V + + Sbjct: 116 ENIRSN------------------------YPNALIMADIATVEDAEFVSQLSPDFLATT 151 Query: 178 --MMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 ++ D+E +K + E +P+IA G LEA + A S Sbjct: 152 LSGYTKETRNRPKPDIELVKILAERFSIPVIAEGNYWEPSQVLEAMK-AGAFAVTIGSAI 210 >UniRef50_B2V534 Dihydrouridine synthase family protein n=29 Tax=Clostridiales RepID=B2V534_CLOBA Length = 321 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 54/169 (31%), Gaps = 10/169 (5%) Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 G I + K+ G +++++N A + F + +D + + Sbjct: 72 GFINTT---RKLQQLGYNEVNLNLGCPAGTVVSKNRGSGFLAKR--EELDIFLEEIFKID 126 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREV 199 + + E + ++ K E++++ Q +L+ K + Sbjct: 127 DMKISIKTRIGKD-SPEEFYELIKIYNKYPLEELIIHPRTQKDFYGNKPNLDVFKDALSL 185 Query: 200 CHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHKQIINIGELKA 246 + P+ +G T+ + F + V + + E+K Sbjct: 186 SNNPVCYNGDIFTVADHNK-FEETFPKVKTLMLGRGILANPGLMNEIKN 233 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 6/116 (5%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSW 65 I +D +K ++ + L K Y + +EL+ + T G + Sbjct: 122 IFKIDDMK-ISIKTRIGKDS--PEEFYELIKIYNKYPLEELIIHPRTQKDFYGNKPNLDV 178 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADR 119 + + P C G I ++ D K + + LA+P L+ + + Sbjct: 179 FKDALSLSNNPVCYNGDIFTVADHNKFEETFPKVKTLMLGRGILANPGLMNEIKNN 234 >UniRef50_Q583Y8 TRNA-dihydrouridine synthase 4, putative n=4 Tax=Trypanosoma RepID=Q583Y8_9TRYP Length = 419 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 1/124 (0%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 D I +N + L VV + V + R + Sbjct: 139 CDAIDLNCGCPQRRVMADGLGAALLRNPEVVADTVRCVRNALEGGVELPCVVKMRVKDDV 198 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 ++D+ ++ + GA I ++ + + + +RE VP++A+GG Sbjct: 199 RLSVDFARQCEAAGAAWITVHGRTPNCSAHAPVRFDAINTIREALGVPVVANGGVRDPST 258 Query: 216 FLEA 219 L+A Sbjct: 259 ALQA 262 Score = 65.6 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 5/99 (5%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDI 75 VVK + + V A++ GA + + T S V ++ + E + + Sbjct: 189 VVKMRVKDDVRLS---VDFARQCEAAGAAWITVHGRTPNCSAHAPVRFDAINTIREALGV 245 Query: 76 PFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLI 113 P GG++ A L+ G + LA+P Sbjct: 246 PVVANGGVRDPSTALQAALTAGVGGVMSGMGLLANPACF 284 >UniRef50_C0QPX6 Indole-3-glycerol phosphate synthase n=5 Tax=Aquificales RepID=C0QPX6_PERMH Length = 263 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 36/224 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEV-IDIPFCVAGGIKSLEDA 89 D V +AK Y E GA + +T + D ++ ++ E I+IP I Sbjct: 70 DPVKIAKIYEENGAAAISV--LTDKEYFKG-DIQYIEQIKESGINIPVLRKDFIIDKRQI 126 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + +FG+D + + L + L + + Sbjct: 127 DEAFAFGSDTFLLIARVLENEELEDLINYGRSFGMEPLIEVH------------------ 168 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL--EQLKKVREV-CHVPLIA 206 T + ++ G I +N + + +L E ++E+ + +IA Sbjct: 169 ---------TKEECEKAVSSGGKIIGINNRDLKTFKVDINLSKELAPYLKELGADI-VIA 218 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G T + +E VDG L ++ +L+ L Sbjct: 219 ESGISTHDQIVELLGY-GVDGFLIGESLMREEDIGKKLRKLLGD 261 >UniRef50_A6DP07 Indole-3-glycerol phosphate synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP07_9BACT Length = 260 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 65/222 (29%), Gaps = 43/222 (19%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V AK Y GA + +T + ++ ++ + +++P I Sbjct: 73 DPVKTAKNYQTLGAAAISV--LTDKDYFQGS-IDYLKQIRQEVELPLLRKDFIIDELQIH 129 Query: 91 KILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD + + L + + + F ++ +V D Sbjct: 130 EARVAGADTFLLIAAVLTEDEMRNFLAIGREFAMEALVEIHD------------------ 171 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP----L 204 + + GA I +N D DL K+ + +P L Sbjct: 172 -----------EEEAHKALAAGAKIIGVNNR--DLRNFTTDLSLTGKLAKF--IPEDKIL 216 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + G T + + D L + EL+A Sbjct: 217 VGESGIKTGKDSRQLL-DCGCSAILVGESLMRDPQKFKELQA 257 >UniRef50_Q0CZL3 tRNA-dihydrouridine synthase 3 n=19 Tax=Leotiomyceta RepID=DUS3_ASPTN Length = 719 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 38/192 (19%), Gaps = 42/192 (21%) Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 I +N D + R Sbjct: 417 IDLNCGCPIDLLFREGAGSALLEHH-SKLEKILRGMNAVSEEIPISVKIRLGVRDNAPNA 475 Query: 160 LDWVQEVQ------------KRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCH----- 201 V+ + G I L+ ++ D + + + Sbjct: 476 QKLVERLVLGGHESHLLGLGPCGTAAITLHGRSRQQRYTKQADWGYIAETAALIKNLNKR 535 Query: 202 ---------------------VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 V + +G + + + + +A VD + + Sbjct: 536 KDELTDTIYEPDERMLPNGGKVYFLGNGDCFSHQDYDDHINNAGVDSVMIGRGALIKPWL 595 Query: 241 IGELK--AYLAT 250 E++ YL Sbjct: 596 FEEIQTGQYLDK 607 Score = 46.8 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 51/186 (27%), Gaps = 42/186 (22%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAE------------EGADELVFYDITASS-DGRVVDKS 64 VK + L +R G + + + + D Sbjct: 462 VKIRLGVRDN-APNAQKLVERLVLGGHESHLLGLGPCGTAAITLHGRSRQQRYTKQADWG 520 Query: 65 WVSRVAEVID--------------------IP------FCVAGGIKSLEDAAKILS-FGA 97 +++ A +I +P F G S +D ++ G Sbjct: 521 YIAETAALIKNLNKRKDELTDTIYEPDERMLPNGGKVYFLGNGDCFSHQDYDDHINNAGV 580 Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 D + I AL P L + + KY ++ + DE +T+ Sbjct: 581 DSVMIGRGALIKPWLFEEI-QTGQYLDKSASERLSLVEKFAKYGLDTWGSDEYGVGITRR 639 Query: 158 ETLDWV 163 L+W+ Sbjct: 640 FLLEWL 645 >UniRef50_A5D1S4 Indole-3-glycerol phosphate synthase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1S4_PELTS Length = 259 Score = 68.7 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 65/223 (29%), Gaps = 37/223 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y E GA + GR D + V +P I Sbjct: 69 DPLRMAQEYGEAGAAAISVLTEERFFLGRPSD---LVSVRSETALPVLRKDFIIDPYQIF 125 Query: 91 KILSFGADKISINSPALADPTLI--TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD + + + L L LAD G+ C++ Sbjct: 126 ESRVLGADAVLLIAAVLQGGQLAELKALADELGMSCLIEVH------------------- 166 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVCHVPLIAS 207 T + GA I +N + + + L K+ + V +++ Sbjct: 167 ----------TEAELYRSLSAGAEIIGINNRDLGTFKTDLNKTLTLSKLIDGQKVTVVSE 216 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G + E ++ V AL + + G L Sbjct: 217 SGIRSRNDI-EMLKECGVHAALVGEALVCRP-DPGRALKELKG 257 >UniRef50_A9KL43 Indole-3-glycerol phosphate synthase n=20 Tax=cellular organisms RepID=TRPC_CLOPH Length = 271 Score = 68.3 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 66/222 (29%), Gaps = 36/222 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +AK Y E GA + G+ ++ V + + IP I Sbjct: 82 DPVFIAKEYEEGGAAAISVLTEPTFFLGKD---DYLMEVKKEVGIPVLRKDFILEAYQIY 138 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD + + L + L L + + Sbjct: 139 QAKLLGADCVLLIVSILTEEQLTGFLKICDELGLSALVETHNQ----------------- 181 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVCHVPLIASGG 209 + V + GA I +N N + L+ + + IA G Sbjct: 182 ----------EEVMRALQCGARIIGVNNRNLSTFEVSIENSLKLRTLVPKEAI-FIAESG 230 Query: 210 AGTMEHFLEAFRDADVDGALAASVFH---KQIINIGELKAYL 248 T E E ++A V+G L + + I LK+ L Sbjct: 231 ISTPEQIKE-LKEAGVNGVLIGETLMKASNKKLMIRNLKSLL 271 >UniRef50_C3RNU9 NADH:flavin oxidoreductase n=2 Tax=Bacteria RepID=C3RNU9_9MOLU Length = 625 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 67/205 (32%), Gaps = 19/205 (9%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVF-YDITASSDG--------RVVDKSWVSR 68 V V+ G + +AK G + L + V Sbjct: 209 VHKVEGFRQIDEG--IAMAKILEGAGIEALHVDVGCYEAWYKAISTVYNEEGHQLDVVKA 266 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLAD--RFGVQCI 125 + E + +P G + + A ++++ G D + + LADP ++ + Sbjct: 267 IKENVSLPVLGQGKLFDPKKAQEVVAQGVLDYVVLGHQMLADPHWANKVKQGNTMDIAPC 326 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE--VQKRGAGEIVLNMMNQDG 183 V + +GK++ + +D +++ + G + + Sbjct: 327 VGCNECLLAGFSGKHYYCAVNPLCYAEKEFALPKVDGIKKSVLVIGGGPGGMYAAITA-- 384 Query: 184 VRNGYDLEQLKKVREVCHVPLIASG 208 + GY+++ +K E L A+G Sbjct: 385 RKRGYEVDLYEK-EERLGGTLWAAG 408 >UniRef50_Q0A6E8 Indole-3-glycerol phosphate synthase n=5 Tax=Proteobacteria RepID=Q0A6E8_ALHEH Length = 267 Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 54/215 (25%), Gaps = 37/215 (17%) Query: 27 EIIGDIVPLAKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 D +A+ Y GA L D D + +P I Sbjct: 74 RDPYDPATIARGYEAAGAACLSVLTDCDFFQG----DDEHLRVARAACGLPVLRKDFIID 129 Query: 86 LEDAAKILSFGADKISINSPALADPTLI--TRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 + GAD + + + AL D + LA G+ +V D A + Sbjct: 130 PWQVLEARMLGADCVLLIAAALDDGRMAELHDLAGSLGMDVLVEVHDADELARAARLKPR 189 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 + R + + + + AG +++ Sbjct: 190 LLGINNRDLRTFETRLETTLDLLHQVPAGSLLVT-------------------------- 223 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 G T R A VD L F + Sbjct: 224 ---ESGIHTPADVARM-RAAGVDAFLVGEAFMRSP 254 >UniRef50_A5KQG7 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQG7_9FIRM Length = 651 Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 48/161 (29%), Gaps = 25/161 (15%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY------DITA 54 ML RI G+ I ++ KR ++ D + + T Sbjct: 209 MLDMRI-------SGE----EHIEGGMEIDEVAEFIKRIEDK-IDMVHISCGVEIDNRTK 256 Query: 55 SSDG------RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA-DKISINSPAL 107 ++ V E + IP V GGI + E+A +IL G D + I + Sbjct: 257 IYMSPTAYAPHKINAKMAKLVKEKVKIPVAVVGGIMTPEEAEEILEDGCADAVVIGRQLI 316 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 ADP + + + + + Sbjct: 317 ADPWWVKKAWEGRSEDIVPCIRCMNCYNPYQYKTEEERRKH 357 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 19/57 (33%) Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + + K V+E +P+ GG T E E D D + + + Sbjct: 269 INAKMAKLVKEKVKIPVAVVGGIMTPEEAEEILEDGCADAVVIGRQLIADPWWVKKA 325 >UniRef50_Q22A31 TIM-barrel protein, yjbN family n=2 Tax=cellular organisms RepID=Q22A31_TETTH Length = 466 Score = 68.0 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 27/266 (10%), Positives = 69/266 (25%), Gaps = 39/266 (14%) Query: 8 PCLDVRDGQVVKGVQFRN--HEIIGDIVPLAKRYAEEGADELVFYDITASS---DGRVVD 62 P +D+ D V F + + ++I V Sbjct: 94 PMIDITD---VHFRNFIRLLTRYSILYTEMIHE------QAVH-HNIRGPQEFLRFDPVQ 143 Query: 63 KSWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V + G + A G D++++N +D + Sbjct: 144 HPVV----------IQLGGNDPDNLAKAAKICEEIGYDEVNLNVGCPSDRVQSGKFGACL 193 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG-AGEIVLNMM 179 + +V E V + D+++ V ++G V++ Sbjct: 194 MKEPELVAEIMRKMKEACSIPVTVKCRLGVDNFDSYEFARDFIKTVSEKGQVQHFVVHAR 253 Query: 180 NQDGVRNGYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFR-DADVDGA 228 + + +++ E H+ +GG T + + + + + G Sbjct: 254 KAFLKGLNPAQNRNVPPLKYDYVLRLKQEFPHLHFSINGGFKTYDQISDILKQENGLHGC 313 Query: 229 LAASVFHKQIINIGELKAYLATQGVE 254 + ++ ++ + Sbjct: 314 MLGRAAYETPWLFSDMDRRYFGKQNP 339 >UniRef50_C6IIM3 Dihydrouridine synthase n=15 Tax=Bacteroides RepID=C6IIM3_9BACE Length = 314 Score = 67.6 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 9/168 (5%) Query: 85 SLEDAAKIL----SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 S E A IL G ++ IN L+ + + G+ + T Sbjct: 72 SAEKAEVILSLFIEKGYQEVDINLGCPF--PLLAKRHNGSGILPYPEEVKALLSIVTRYP 129 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV 199 ++ E L + +I ++ G DL+ REV Sbjct: 130 QISFSVKMRLGWE-QPDECLALAPILNDLPLRQITMHPRLGKQGYKGEVDLQGFSAFREV 188 Query: 200 CHVPLIASGGAGTMEHFLEA-FRDADVDGALAASVFHKQIINIGELKA 246 C +PL+ +G +E + + G + E K Sbjct: 189 CQLPLVYNGDIHNLEDIQRISTQFPSLAGIMIGRGLLANPALALEYKE 236 Score = 55.6 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 45/145 (31%), Gaps = 5/145 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 VK + LA + ++ + + VD S EV +P Sbjct: 135 VKMRLGWEQPDEC--LALAPILNDLPLRQITMHPRLGKQGYKGEVDLQGFSAFREVCQLP 192 Query: 77 FCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 G I +LED +I + I I LA+P L + + + Sbjct: 193 LVYNGDIHNLEDIQRISTQFPSLAGIMIGRGLLANPALALEYKENRTLAPDEMRDRLKSM 252 Query: 135 AETGKYHVNQYTGDESRTRVTQWET 159 ++ + + +T+ +T Sbjct: 253 HKSVYNNYDVLLEGGEGQLLTKMKT 277 >UniRef50_B6FRG7 Putative uncharacterized protein (Fragment) n=2 Tax=Clostridiales RepID=B6FRG7_9CLOT Length = 214 Score = 67.6 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 66/202 (32%), Gaps = 18/202 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP-----------LAKRYAEEGADELVFYDI 52 + PC+D+ +G V+ + + + GD A Y ++G + Sbjct: 18 MQFRPCIDIHNG-AVRQIVGGSLKDEGDQAITNFTSEYDARFYANLYRKDGIRGGHIILL 76 Query: 53 T--ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 S K + + + GG+ + E+A + L GA + + S D Sbjct: 77 NPSTSEYFDATKKQALEALR-AYPQGMQIGGGV-TAENAKEYLDAGASHVIVTSYVFRDG 134 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + + + + K + +T T+ + ++ Sbjct: 135 EVKWENLQKLKET-VGKERIVLDLSCRKKKDFYYIVTNRWQTFTNVKVTISLLDQLSDY- 192 Query: 171 AGEIVLNMMNQDGVRNGYDLEQ 192 E +++ ++ +G +G +L Sbjct: 193 CDEFLIHGVDVEGKSSGVELPL 214 >UniRef50_UPI0001C41F37 tRNA-dihydrouridine synthase DusA2 n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41F37 Length = 237 Score = 67.6 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDG-RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 D + +AK + G D L A G R D + +AE +I I S+ A Sbjct: 150 DNLEIAKLAEDCGVDYLHI---DAMKMGVRDADFYLIKEIAENTNIFIIGNNSINSISQA 206 Query: 90 AKILSFGADKISINSPAL 107 K+L+ GA+ ISI A+ Sbjct: 207 EKMLNAGANGISIARAAI 224 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 54/177 (30%), Gaps = 9/177 (5%) Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 V+ + + ++ + + KI D I IN L Q Sbjct: 62 VNAIKDSFNVQVSANLRGSTPDPLIKISKIEKLDIIEINCHC-----RQEELVAVGCGQS 116 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 +++ D + R V + L+ + + G + ++ M Sbjct: 117 MLLRPDLEDYIREVVKKSESKVSMKMRANVEGVDNLEIAKLAEDCGVDYLHIDAM--KMG 174 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 D +K++ E ++ +I + ++ + +A +G A +N Sbjct: 175 VRDADFYLIKEIAENTNIFIIGNNSINSISQAEKML-NAGANGISIARAAISGKLNF 230 >UniRef50_D1B5R0 Dihydrouridine synthase DuS n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5R0_THEAS Length = 318 Score = 67.2 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 9/158 (5%) Query: 86 LEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 LE A L + + +N + ++ + ++ D A + Sbjct: 86 LEGARIALGEYPFRAVEVNMACP-----MPKVVSKGSGAAMLKDPDLAARAVALLKGLGV 140 Query: 145 YTGDESRTRVT-QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 ++R ETL + + + G ++L+ G D+EQ+ ++ Sbjct: 141 SVWVKARVLPGGFEETLRFCGRLFEAGLDLLLLHGRTSPQRYEGRADVEQVIRLSRAFPG 200 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++ SG + + L L A F + + Sbjct: 201 RVVGSGDVFSPDDALRYLE-GGCVAVLLARGFVRDPLL 237 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 1/92 (1%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLED 88 + + R E G D L+ + T+ D V R++ +G + S +D Sbjct: 154 EETLRFCGRLFEAGLDLLLLHGRTSPQRYEGRADVEQVIRLSRAFPGRVVGSGDVFSPDD 213 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRF 120 A + L G + + + DP L R A R Sbjct: 214 ALRYLEGGCVAVLLARGFVRDPLLALRCARRL 245 >UniRef50_Q1G992 Dihydroorotate dehydrogenase n=3 Tax=Lactobacillus delbrueckii RepID=Q1G992_LACDA Length = 309 Score = 67.2 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 44/136 (32%), Gaps = 21/136 (15%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------IT------------ASSDG---RVVDKSWVS 67 + IV +A+ GAD L + + G + V V+ Sbjct: 173 VTSIVEIAQAAEGGGADGLTLINTLLVLHLDLKTRRPVLGNDFGGLYGQAVKPVAVRMVA 232 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 +V + +P GGI S EDAA+ + GA + I S + D I + D + Sbjct: 233 QVKQATSLPIIGVGGINSPEDAAEFILAGASAVQIGSMSFYDKLAIKHVIDGLPAVLAGM 292 Query: 128 GIDTWYDAETGKYHVN 143 G Sbjct: 293 GASDVTSLVGQWQSNK 308 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 59/211 (27%), Gaps = 37/211 (17%) Query: 64 SWVSRVAE-VIDIPFCVAGGIKSLED----AAKILSFGADKISINSPALADPTLITRLAD 118 + + E D+P + G +S+ED A + + D + +N Sbjct: 86 EKIPALREKHPDLPILASVGGESVEDYVEVAEILAAAKPDALELNLSCPNVSE------G 139 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV--- 175 + ++ K + Y ++ Q + GA + Sbjct: 140 GMTFGIVPEMLEKITRLVKEKVDLPVYVK----LTPNVTSIVEIAQAAEGGGADGLTLIN 195 Query: 176 --------------LNMMNQDGVR----NGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + + G+ + + +V++ +P+I GG + E Sbjct: 196 TLLVLHLDLKTRRPVLGNDFGGLYGQAVKPVAVRMVAQVKQATSLPIIGVGGINSPEDAA 255 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYL 248 E A S+ + I + L Sbjct: 256 EFI-LAGASAVQIGSMSFYDKLAIKHVIDGL 285 >UniRef50_A6BK55 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK55_9FIRM Length = 288 Score = 67.2 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 50/159 (31%), Gaps = 5/159 (3%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 L+ K+ +G D++++N + + F + ++ + D K V Sbjct: 48 LDTVEKLKGYGYDEVNLNLGCPSKTVVSKGRGSGFLIHT--EELNWFLDEIYAKADVKIS 105 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 E + ++ + E++++ Q G DL+ + C L Sbjct: 106 IKTRIGK-FDADEWGELLRIYNQYPLEELIVHPRVQQQFYKGHPDLDAFADAVKECKHTL 164 Query: 205 IASGGAGTMEHFLEAFRD-ADVDGALAASVFHKQIINIG 242 +G T E + + + + + I Sbjct: 165 CYNGDIFTTEDMEKLKKRFPEASCIMLGRGILRNPELIE 203 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 38/115 (33%), Gaps = 7/115 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDK 63 I DV+ +K + + L + Y + +EL+ + + D Sbjct: 95 EIYAKADVK--ISIKTRIGKF--DADEWGELLRIYNQYPLEELIVHPRVQQQFYKGHPDL 150 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRL 116 + + C G I + ED K+ A I + L +P LI + Sbjct: 151 DAFADAVKECKHTLCYNGDIFTTEDMEKLKKRFPEASCIMLGRGILRNPELIEIM 205 >UniRef50_C3WAT9 2-nitropropane dioxygenase n=5 Tax=Fusobacterium RepID=C3WAT9_FUSMR Length = 312 Score = 67.2 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 64/194 (32%), Gaps = 3/194 (1%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVI 73 +VVKG I + LAK + GAD +V + + + + I Sbjct: 106 EVVKGT-GVKVIPIVSTLKLAKISQKLGADAIVVEGGNAGGHLGTNLDSWDIMEEITKNI 164 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 DIP AGG+ + EDA ++LS G D + + S +A + G Sbjct: 165 DIPVFGAGGVITPEDAERMLSLGVDGVQMGSRFVASEECEVDDFFKNMYVNAKEGDIVEM 224 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL 193 + G + + + + K+ + +N G Y+ Sbjct: 225 MSSAGLPANAIISPFVQKILDDNPDKPTHCVKCLKKCTYKFCVNERLVRGHNGDYEGGIF 284 Query: 194 KKVREVCHVPLIAS 207 ++ + I S Sbjct: 285 FAGKDAWKINEILS 298 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 5/172 (2%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + VA + + + E A+I + + Sbjct: 26 KLAAAVANEGGVGVIAGTTLSTDELKAEIKKARDMITNEGGALAVNIMFAVTNFMDLVKA 85 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 I GID + + + TL + QK GA IV+ N G Sbjct: 86 SIEAGIDIIIFGAGFSRDIFEVVKGTGVKVIPIVSTLKLAKISQKLGADAIVVEGGNAGG 145 Query: 184 VRNGYD---LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 G + + ++++ + +P+ +GG T E VDG S Sbjct: 146 HL-GTNLDSWDIMEEITKNIDIPVFGAGGVITPEDAERML-SLGVDGVQMGS 195 >UniRef50_Q9V1G3 Indole-3-glycerol phosphate synthase n=11 Tax=Euryarchaeota RepID=TRPC_PYRAB Length = 229 Score = 67.2 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 65/224 (29%), Gaps = 36/224 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + + +RY GA + + IT R + + R+ + ++P I + E+ Sbjct: 37 DPLEILRRYERAGAVGISY--ITDPKYFRG-NFDFFKRLCKETELPVLRKDFITTKEEIE 93 Query: 91 KILSFGADKISINSPALAD--PTLITRLA-DRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 K G + + + L D P + V ++ A + Sbjct: 94 KTAEAGGSAVLLITRLLKDKLPEFVDHAREHGLDTLVEVHTLEELKIAIQTNSTMIGINN 153 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 + + ++ + V KV E Sbjct: 154 RDIGKLELDDGNVSLTAKLAPLIPDKFV-------------------KVSES-------- 186 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 G T+E A + D AL + K LK+++ + Sbjct: 187 -GITTLEDLKVALKY--ADAALIGTALMKTEDPEKLLKSFVEAK 227 >UniRef50_B0MC46 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MC46_9FIRM Length = 644 Score = 67.2 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 48/155 (30%), Gaps = 9/155 (5%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG--------RVVDKSWVSRVAEVID 74 I D V AK + GAD + +A+ + ++V + + Sbjct: 227 MNGGNKIEDAVVYAKLAEKAGADAIHISTGSAAGGNIVTTYYTDPGFNVENAAKVKKAVH 286 Query: 75 IPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 +P G I A +I+ G AD IS+ ++ D ++ + + Sbjct: 287 VPVICVGRINDPALAEEIIESGQADLISLGRQSICDSEFPNKIYEGREEEIFHCTGCMQR 346 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + + E ++E ++ Sbjct: 347 CYYSPGCDELDQGISCMINPFSGKEGRWTIKEAEE 381 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 8/84 (9%) Query: 157 WETLDWVQEVQKRGAGEIVL-NMMNQDG-------VRNGYDLEQLKKVREVCHVPLIASG 208 + + + + +K GA I + G G+++E KV++ HVP+I G Sbjct: 234 EDAVVYAKLAEKAGADAIHISTGSAAGGNIVTTYYTDPGFNVENAAKVKKAVHVPVICVG 293 Query: 209 GAGTMEHFLEAFRDADVDGALAAS 232 E D Sbjct: 294 RINDPALAEEIIESGQADLISLGR 317 >UniRef50_Q03148 Pyridoxine biosynthesis protein SNZ1 n=262 Tax=cellular organisms RepID=SNZ1_YEAST Length = 297 Score = 66.8 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 66/238 (27%), Gaps = 20/238 (8%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY------DITASSDGRVVDKSW 65 ++ G +++ AK + GA ++ + R+ D Sbjct: 8 IKSGLAQMLKGGVIMDVV--TPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKM 65 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + + + IP I +A I + D I + D+F V + Sbjct: 66 IKDIMNSVSIPVMAKVRIGHFVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFV 125 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN------MM 179 D E + ++ + + V+ +++ + Sbjct: 126 CGAKD---LGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDI 182 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLI--ASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + + LK V E +P++ A+GG T DG S Sbjct: 183 AKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADA-ALLMQLGCDGVFVGSGIF 239 >UniRef50_C8W700 Dihydroorotate dehydrogenase family protein n=2 Tax=Atopobium RepID=C8W700_ATOPD Length = 308 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 21/114 (18%) Query: 31 DIVPLAKRYAEEGADELV-----------FYDI-------TASSDG---RVVDKSWVSRV 69 ++ + K + EGAD L + T G V Sbjct: 177 NVAEIGKAFEAEGADGLTLINSIPGMSINVHTRKSRLSKPTGGLSGPLCHNAAVRMVWEC 236 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 A+ + IP C GG+++ EDAA+ + GA +S+ S L DP R+ + Sbjct: 237 AQAVSIPICGVGGVETGEDAAEFILAGATAVSVGSANLYDPMCAPRILNELTDW 290 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 26/123 (21%) Query: 156 QWETLDWVQEVQKRGAGEIV-----------LNMMNQD-----GVRNGY-----DLEQLK 194 + + + GA + ++ G +G + + Sbjct: 175 PVNVAEIGKAFEAEGADGLTLINSIPGMSINVHTRKSRLSKPTGGLSGPLCHNAAVRMVW 234 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII----NIGELKAYLAT 250 + + +P+ GG T E E A S + + EL + + Sbjct: 235 ECAQAVSIPICGVGGVETGEDAAEFI-LAGATAVSVGSANLYDPMCAPRILNELTDWAKS 293 Query: 251 QGV 253 QGV Sbjct: 294 QGV 296 >UniRef50_Q1CZH5 Indole-3-glycerol phosphate synthase n=2 Tax=Cystobacterineae RepID=Q1CZH5_MYXXD Length = 262 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 70/221 (31%), Gaps = 34/221 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D+V +A+ Y GA + +T D + V V + +P + + + Sbjct: 68 DVVAVARAYEAAGASAISV--LTDGPDFGGSLEDLV-AVRAAVSLPVLRKDFLVAAREVE 124 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + +GAD + + + AL D L +A V + Sbjct: 125 ESAQWGADAVLLIADALEDGELREMVATAKAVGVAALVEAH------------------- 165 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG--VRNGYDLEQLKKVREVCHVPLIASG 208 T + GA + +N N G L + +R V L+A Sbjct: 166 --------TEAHAERALAAGAKLVGINNRNLATLKTDTGTALRVMPNLRSRARV-LVAES 216 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G ++ + A ++A D L ++ L+ L Sbjct: 217 GLKSLADLVAA-QEAGADAVLVGESLLREPDPGHALRRLLG 256 >UniRef50_A0EAZ6 Chromosome undetermined scaffold_87, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0EAZ6_PARTE Length = 346 Score = 66.8 bits (162), Expect = 7e-10, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 52/188 (27%), Gaps = 17/188 (9%) Query: 71 EVIDIPFCVAGGIKSLE----DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 ++ P G E A G D+I++N ++ + + Sbjct: 61 SQVEHPVVCQLGGNDPEKLAKAAQIAEQAGFDEINLNVGCPSERVQDGAFGACLMKEPHL 120 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG-AGEIVLNMMNQDGVR 185 V E K + ++V+ V K G +++ Sbjct: 121 VAQCMKKMKEAVKIPCTLKCRLGVDNLDSYEFVRNFVEIVYKEGEVNHFIMHARKAFLKG 180 Query: 186 NGYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + + +++ E + +GG EH + +VDG + H Sbjct: 181 LNPHENRTVPPLKYDWVYQLKKEFPEIKFTLNGGIKCTEHIDQVL--PNVDGIMIGRSAH 238 Query: 236 KQIINIGE 243 + + Sbjct: 239 ENPWMFSD 246 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 27/137 (19%) Query: 1 MLAKR---IIPCLDVRDGQVVKGVQF----RNHEIIGDIVPLAKRYAEEGADELVFYDIT 53 M + IPC K ++E + + V + Y E + + + Sbjct: 125 MKKMKEAVKIPCTL-------KCRLGVDNLDSYEFVRNFVEIV--YKEGEVNHFIMHARK 175 Query: 54 ASSDGRVVD---------KSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISIN 103 A G WV ++ + I F + GGIK E ++L D I I Sbjct: 176 AFLKGLNPHENRTVPPLKYDWVYQLKKEFPEIKFTLNGGIKCTEHIDQVLP-NVDGIMIG 234 Query: 104 SPALADPTLITRLADRF 120 A +P + + + Sbjct: 235 RSAHENPWMFSDFDRLY 251 >UniRef50_B1XI00 Dihydrouridine synthase A n=8 Tax=Chroococcales RepID=B1XI00_SYNP2 Length = 344 Score = 66.4 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 21/200 (10%), Positives = 55/200 (27%), Gaps = 22/200 (11%) Query: 70 AEVIDIPFCVAGGIKSLEDAAKIL----SFGADKISINSPALADPTLITRLADRFGVQCI 125 A I + G + ++ A+ +G D+I++N + Q Sbjct: 63 AAEHPISLQLGGD--NPKELAECAKVGEDWGYDEINLNVGCPSPRVQQGNFGACLMTQP- 119 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTR--VTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + A G ++ + + +++ V G ++ Sbjct: 120 -ELVADCVAAMQGAVNIPVTVKHRIGVDEQDSYADLCRFIEIVSATGCDRFSVHARKAWL 178 Query: 184 VRNGYDL----------EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + + ++ H+ + +GG T+EH VD + Sbjct: 179 QGLSPKENRTVPPLRYADVYRLKQDFPHLWIEINGGITTLEHIQTHLTQ--VDAVMVGRA 236 Query: 234 FHKQIINIGELKAYLATQGV 253 + + + + + Sbjct: 237 AYDNPYLFATVDRDIYGEAI 256 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 12/110 (10%) Query: 18 VKGVQFRNHEII-GDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVS 67 VK + + D+ + + G D + A G + + V Sbjct: 139 VKHRIGVDEQDSYADLCRFIEIVSATGCDRFSVHARKAWLQGLSPKENRTVPPLRYADVY 198 Query: 68 RVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 R+ + + + GGI +LE L D + + A +P L + Sbjct: 199 RLKQDFPHLWIEINGGITTLEHIQTHL-TQVDAVMVGRAAYDNPYLFATV 247 >UniRef50_Q8EAJ0 tRNA-dihydrouridine synthase A n=121 Tax=Bacteria RepID=DUSA_SHEON Length = 335 Score = 66.4 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 61/190 (32%), Gaps = 14/190 (7%) Query: 71 EVIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 E + + G ++ A G D++++N +D R + +V Sbjct: 65 EEHPLALQLGGSNPVELARCAKLAAERGYDEVNLNVGCPSDRVQNGRFGACLMAEPELVA 124 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 + V T + + ++ V +G GE +++ Sbjct: 125 ECVDAMKQVVDIPVTVKTRIGIDEQDSYEFLTHFIDTVMAKGCGEFIIHARKAWLQGLSP 184 Query: 189 ---------DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 D +++ +++ + + + +GG ++E + DG + ++ Sbjct: 185 KENREIPPLDYDRVYQLKRDYPALNISINGGITSLEQAQTHLQHL--DGVMVGREAYQNP 242 Query: 239 INIGELKAYL 248 + ++ L Sbjct: 243 YMLAQVDQVL 252 >UniRef50_Q466J2 NADH-dependent flavine oxidoreductase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q466J2_METBF Length = 325 Score = 66.4 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 47/144 (32%), Gaps = 18/144 (12%) Query: 5 RIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +I+P + + +V D + AK + + G D L + + Sbjct: 174 QILPEIRNNTPKNFIVSVRMGEYLPESKDGIEAAKAFEKAGIDLLHI----SFGMQPPAN 229 Query: 63 K---SWV--------SRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADP 110 ++ ++ + + IP I++ E ++ D +++ LADP Sbjct: 230 TVPDGFICSPITYSGCKIKKEVKIPVIAVNEIRTEEQVRFLIENDYVDLVAVGRGMLADP 289 Query: 111 TLITRLADRFGVQCIVVGIDTWYD 134 + + V + ++ Sbjct: 290 EFANHVINSEPVNTCLGCERCFWF 313 >UniRef50_B8MSD1 tRNA dihydrouridine synthase (Smm1), putative n=18 Tax=Leotiomyceta RepID=B8MSD1_TALSN Length = 787 Score = 66.4 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 8/182 (4%) Query: 64 SWVSRVA-EVIDIPFCVAGGIKSLE---DAAKILSFGADKISINSPALADPTLITRLADR 119 S + R+ E G S E AAK+++ I +NS + + Sbjct: 436 SVIYRIDPENEKGKLIFQIGTASPEFAVQAAKVVAGDVAGIDVNSGCPKPFSTSGGMGAA 495 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 + + R T T V + G + ++ Sbjct: 496 LLRTPDKLVSILESLVREVGTPYKIGISVKIRLLETPELTKSLVTRLVATGITGLTIHCR 555 Query: 180 NQDGVRNGYD----LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 L + +V V + +G + + LE ++ +VDGA+ A+ Sbjct: 556 TTPMRPRERAIRDQLSMIAEVCRNAGVACVMNGDVTSRDQALELMKEYNVDGAMIATAAE 615 Query: 236 KQ 237 Sbjct: 616 AN 617 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 8/105 (7%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV----DKSWVSRVA 70 G VK E+ +V R G L + T R S ++ V Sbjct: 521 GISVKIRLLETPELTKSLVT---RLVATGITGLTIHCRTTPMRPRERAIRDQLSMIAEVC 577 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLIT 114 + + G + S + A +++ + D I + A A+ + Sbjct: 578 RNAGVACVMNGDVTSRDQALELMKEYNVDGAMIATAAEANSSCFR 622 >UniRef50_Q7UKJ7 Indole-3-glycerol phosphate synthase n=5 Tax=Bacteria RepID=TRPC_RHOBA Length = 259 Score = 66.4 bits (161), Expect = 9e-10, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 60/222 (27%), Gaps = 35/222 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D +AK Y + GA + G ++ +V +D+P I Sbjct: 71 DPPTIAKSYEDGGAACISVLTDEPFFQGS---LDYLRQVRSAVDLPILRKDFIVDPYQLL 127 Query: 91 KILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD + + + L+ L + A G+Q ++ + A + Sbjct: 128 QARVAGADAVLLIAECLSPQQLIEMDEQASELGLQTLIELYEPENLAPVLATKTRLVGIN 187 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 R + + V+ + + ++ Sbjct: 188 NRDLRTFETDLQHCVRLAADIPSDRL-----------------------------VVGES 218 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G T + + L +Q KA LA+ Sbjct: 219 GIRTAADV-AMLKAGGIKAILVGESLMRQPDITIATKALLAS 259 >UniRef50_A1ALX2 Indole-3-glycerol phosphate synthase n=4 Tax=Desulfuromonadales RepID=A1ALX2_PELPD Length = 267 Score = 66.4 bits (161), Expect = 9e-10, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 58/223 (26%), Gaps = 35/223 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y GA L GR+ + + R+ +D+P I Sbjct: 78 DPLEIARIYETNGATCLSVLTDQHFFMGRLENLT---RIRGEVDLPLLRKDFILDPFQIY 134 Query: 91 KILSFGADKISINSPALADPTLITRL--ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD I + + L P +I + A + ++ D + + Sbjct: 135 EARCAGADAILLITAILELPQMIDYITLARDLSLDILLEVHDERELDVALRTDCTLIGVN 194 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 R + + +++ A Sbjct: 195 NRNLRTFTTDLATTGRLASMLPPEHLLV-----------------------------AES 225 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 G T D L ++ +L+ L + Sbjct: 226 GISTRADIER-LAADGADAFLIGESLMRETDIGSQLRILLGNR 267 >UniRef50_Q04VP3 TRNA-dihydrouridine synthase n=4 Tax=Leptospira RepID=Q04VP3_LEPBJ Length = 339 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 19/188 (10%), Positives = 54/188 (28%), Gaps = 18/188 (9%) Query: 71 EVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 E + + + G E + +G +I++N +D Sbjct: 64 EELPLAIQLGGDNPKALAESSKIGEDYGYSEINLNVGCPSDRVREGNFGACLMETP--ER 121 Query: 129 IDTWYDAETGKYHVNQYTGDESRT--RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + A G + + T + +++ V++ G +++ Sbjct: 122 VAELVCAMDGNVSIPVTVKCRIGISGKETLEDLCRFIECVRQAGVRRFIVHARIAILGGL 181 Query: 187 GYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 ++ ++ E + + +GG T+ + + DG + ++ Sbjct: 182 SPAQNRQIPPLRYAHVESLKKEFPDLLIEINGGIRTLAEMQDRLKTN--DGVMIGRAAYE 239 Query: 237 QIINIGEL 244 E+ Sbjct: 240 TPYLFSEV 247 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 60/202 (29%), Gaps = 20/202 (9%) Query: 13 RDGQV-----VKGVQF-RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-------- 58 DG V VK E + D+ + + G + + A G Sbjct: 129 MDGNVSIPVTVKCRIGISGKETLEDLCRFIECVRQAGVRRFIVHARIAILGGLSPAQNRQ 188 Query: 59 -RVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + V + + D+ + GGI++L + L D + I A P L + + Sbjct: 189 IPPLRYAHVESLKKEFPDLLIEINGGIRTLAEMQDRLKTN-DGVMIGRAAYETPYLFSEV 247 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI-- 174 F Y +++ + + +K GA Sbjct: 248 DSLFFHDNSPSLSRREVLLRMRDYIEEVVLKEKNGKPHHALRHMLGLFHGEK-GARSFRR 306 Query: 175 VLNMMNQDGVRNGYDLEQLKKV 196 V+ + L+ ++++ Sbjct: 307 VVTERMYYDYSSDLLLDAIQEI 328 >UniRef50_A6G755 Indole-3-glycerol-phosphate synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G755_9DELT Length = 264 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 65/230 (28%), Gaps = 45/230 (19%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D +A Y GA + DG + V + +P I S Sbjct: 72 RESADPKHIASLYVAAGAAAISVLT-DRHFDGS---FEDLRTVRAAVSVPVLCKDFIISR 127 Query: 87 EDAAKILSFGADKISINSPALADPTLI--TRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + GAD I + AL P L A G+QC+V D Sbjct: 128 SQIIRARQEGADAILLIVAALEPPMLRDLHNFATDLGLQCLVEAHDDHE----------- 176 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP- 203 V+ GA + LN N ++++ +R VP Sbjct: 177 ------------------VERAMAAGAKIVGLNSRN----LQTFEVDLDNIIRYRPDVPR 214 Query: 204 ----LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + G + R A VD L SV + +L +A Sbjct: 215 EGFLYVGESGIQDRKDVRR-LRAAGVDAILVGSVLMRSEDPGAKLAELIA 263 >UniRef50_Q2RTX4 Dihydrouridine synthase TIM-barrel protein yjbN n=3 Tax=Bacteria RepID=Q2RTX4_RHORT Length = 349 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 66/201 (32%), Gaps = 17/201 (8%) Query: 71 EVIDIPFCVAG-GIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVG 128 + + + G ++L +A ++ + FG +I++N +D R +V Sbjct: 71 DEHPLALQLGGSDPRALAEATRLAAPFGFAEINLNVGCPSDRVSSGRFGACLMADPALVA 130 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 AE V + + + +V +V + G I+++ Sbjct: 131 ECLSAMAEASNAPVTIKHRIGIDDLDSYDQLVGFVDQVARSGIATIIVHARKAWLKGLSP 190 Query: 189 D---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAF-----RDADVDGALAASV 233 + + +++ + + +I +GG T+ L+ VDG + Sbjct: 191 KENREIPPLRHDVVHRLKADFPGLEVILNGGITTLTQALDHLGSGDPAAPAVDGVMIGRA 250 Query: 234 FHKQIINIGELKAYLATQGVE 254 ++ + + + + Sbjct: 251 AYETPYMLAQADGLIFGEATP 271 Score = 43.7 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 16/114 (14%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRV 69 + + + +V + A G ++ + A G + V R+ Sbjct: 148 HRIGIDDLDSYDQLVGFVDQVARSGIATIIVHARKAWLKGLSPKENREIPPLRHDVVHRL 207 Query: 70 AEVID-IPFCVAGGIKSLEDAAKILSFG------ADKISINSPALADPTLITRL 116 + + GGI +L A L G D + I A P ++ + Sbjct: 208 KADFPGLEVILNGGITTLTQALDHLGSGDPAAPAVDGVMIGRAAYETPYMLAQA 261 >UniRef50_Q6MQA5 2-nitropropane dioxygenase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQA5_BDEBA Length = 341 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 57/194 (29%), Gaps = 31/194 (15%) Query: 65 WVSRVAEVIDIPFCVAGGIKS--------LEDAAKIL-----SFGADKISINSPALADPT 111 + +V + PF V I + +E K+L G D + DP Sbjct: 53 LIQKVKNLTTRPFAVNLFIPTSPAVDLLQVERMKKLLLPFYRELGMDSV---PELSYDPD 109 Query: 112 LI-TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 L + A + + + T + L+ + +QK+G Sbjct: 110 LFQKQFAVVLEEKVPAFSFTFGCLKPSEMAALKSLNVFVMGTATS----LEEAEYLQKQG 165 Query: 171 AGEIVLNMMNQDGVRNG---------YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 +V + G R ++++ E +P+IA+GG + Sbjct: 166 CDAVVAQGLEAGGHRGSFLDGKFPLLPAKNLVQEISERFQIPVIAAGGIVSKADMQTML- 224 Query: 222 DADVDGALAASVFH 235 A + F Sbjct: 225 SAGAVAVQIGTAFL 238 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 11/89 (12%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKS----------WVSRVAEVIDIPFCVAGG 82 + A+ ++G D +V + + R V ++E IP AGG Sbjct: 155 LEEAEYLQKQGCDAVVAQGLE-AGGHRGSFLDGKFPLLPAKNLVQEISERFQIPVIAAGG 213 Query: 83 IKSLEDAAKILSFGADKISINSPALADPT 111 I S D +LS GA + I + L Sbjct: 214 IVSKADMQTMLSAGAVAVQIGTAFLVCHE 242 >UniRef50_A3XQ63 PcrB-like protein n=3 Tax=Flavobacteriaceae RepID=A3XQ63_9FLAO Length = 241 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 9/111 (8%) Query: 3 AKRIIPC--LDVRDGQV-----VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS 55 A IIP + + G+ V Q E++ IV A G + + + Sbjct: 128 ALEIIPTGYILIDGGKQTTVERVSQTQAIPQELVQRIVDTALAGEYSGKKLIYLEAGSGA 187 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 V + + V + I IP V GGI+S I + GAD + + + Sbjct: 188 L--NPVSEEIIQAVKDAISIPLIVGGGIRSQLKLEAIYAAGADLVVVGTAF 236 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 52/183 (28%), Gaps = 19/183 (10%) Query: 65 WVSRVAEVIDIPFCVA-GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 V+ + + +P + G + + A AD I L+ + + Sbjct: 70 AVNLIKQKTSLPVLLFPGDYRQITAA-------ADGILF-LSLLSGENPEYLIRQQIQSV 121 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK-------RGAGEIVL 176 + R TQ + VQ + G I L Sbjct: 122 GKLRASALEIIPTGYILIDGGKQTTVERVSQTQAIPQELVQRIVDTALAGEYSGKKLIYL 181 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 G N E ++ V++ +PLI GG + EA A D + + F + Sbjct: 182 EA--GSGALNPVSEEIIQAVKDAISIPLIVGGGIRSQLKL-EAIYAAGADLVVVGTAFEQ 238 Query: 237 QII 239 Sbjct: 239 GNF 241 >UniRef50_C8WHP0 Dihydroorotate dehydrogenase family protein n=3 Tax=Bacteria RepID=C8WHP0_EGGLE Length = 356 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 21/117 (17%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------ITASSDG---------------RVVDKSWVS 67 + D+ +A+ GAD L + I A + V V Sbjct: 223 VTDVTEIARAAVSAGADALSLINTLLGMAIDAERRRPQLARGVGGLSGPAVKPVALRMVW 282 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 V + +D+P GGI DA + + GA +++ + +P + D C Sbjct: 283 EVHQAVDVPLLGMGGISCATDAVEFMLAGATAVAVGTANFVNPHATVEIIDGMAQYC 339 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 35/122 (28%), Gaps = 26/122 (21%) Query: 158 ETLDWVQEVQKRGAGEIVL------NMMNQD----------GVRNGYDLEQLK-----KV 196 + + + GA + L ++ + G +G ++ + +V Sbjct: 225 DVTEIARAAVSAGADALSLINTLLGMAIDAERRRPQLARGVGGLSGPAVKPVALRMVWEV 284 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK----AYLATQG 252 + VPL+ GG +E A + E+ Y G Sbjct: 285 HQAVDVPLLGMGGISCATDAVEFM-LAGATAVAVGTANFVNPHATVEIIDGMAQYCERHG 343 Query: 253 VE 254 +E Sbjct: 344 IE 345 >UniRef50_A4ECL7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECL7_9ACTN Length = 302 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 23/115 (20%) Query: 31 DIVPLAKRYAEEGADELVFY----------------------DITASSDGRVVDKSWVSR 68 ++ +AK GAD L ++ + V Sbjct: 171 NVAEIAKALEAAGADGLSVINSIQGMAIDVHTRKSRVAKPKGGLSGPLCHHIA-VRMVWE 229 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 VA+ +DIP GG+ + EDAA+ + GA +S+ DP ++A Sbjct: 230 VAQAVDIPINGVGGVMTGEDAAEFILAGATCVSVGMANFVDPCASLKIAHELEAW 284 >UniRef50_B1I3Z7 Indole-3-glycerol-phosphate synthase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3Z7_DESAP Length = 275 Score = 65.6 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 66/223 (29%), Gaps = 39/223 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A Y GA + GR ++S + + +P I S Sbjct: 69 DPVEIACIYEGAGAAAVSVLTDHTYFGGRP---EYLSEIRRSVKLPLLRKDFIISEHQVY 125 Query: 91 KILSFGADKISINSPALADPTLI--TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD + + + L D L L G++ +V Sbjct: 126 ESRVLGADAVLLIAAVLDDHELKGLMELTAALGMESLVEVHS------------------ 167 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV--CHVPLIA 206 L ++ GA + +N + R DL+ +++ V ++ Sbjct: 168 -----------LAELERATAAGASLVGINNRDLGTFRT--DLKHTRELAVHLPPEVTTVS 214 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G T + L A VD L + ++ L Sbjct: 215 ESGIRTRDDVL-ALEAWGVDAVLVGETLMRADDIDARVRELLG 256 >UniRef50_C4F860 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F860_9ACTN Length = 307 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 21/111 (18%) Query: 34 PLAKRYAEEGADELVFYD---------ITASSD------------GRVVDKSWVSRVAEV 72 +A+ EGAD L + T S + V A Sbjct: 179 EIARALEAEGADGLTVINSIPGMSIDVRTRRSRLSKPTGGLSGPLCHPIAVRMVWEAANA 238 Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 +DIP C GG+ + EDAA+ + GA +S+ +P R+ Sbjct: 239 VDIPICGVGGVMTGEDAAEFILAGACCVSVGMANFVEPDASVRILHELEAW 289 >UniRef50_A5USQ4 Indole-3-glycerol phosphate synthase n=8 Tax=Bacteria RepID=TRPC_ROSS1 Length = 269 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 61/221 (27%), Gaps = 33/221 (14%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEV---IDIPFCVAGGIKSLE 87 D + LA YA GA + G + + + + +P I Sbjct: 72 DPLALAHTYASNGASAISVLTDVRFFQGSLKHLEGIRAMVDRGAVPPLPLLRKDFIIDPY 131 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 A+ ++GAD + + AL D TL LA + Sbjct: 132 QVAEARAYGADALLLIVAALDDETLAALLALTHSFGMQALVEVHN--------------- 176 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVREVCHVPLIA 206 D ++ GA I +N + +L + + PL+ Sbjct: 177 ------------EDELRRALDAGASIIGVNNRDLHSFTTTLETTRRLAALLPSSNRPLLV 224 Query: 207 S-GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 S G T EH R D L +++ Sbjct: 225 SESGIFTAEHV-ALVRSWGADAILVGEALVTAPDISSKVRE 264 >UniRef50_Q0SMC0 Histidine phosphokinase/phophatase, putative n=16 Tax=Borrelia burgdorferi group RepID=Q0SMC0_BORAP Length = 334 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 21/214 (9%), Positives = 62/214 (28%), Gaps = 11/214 (5%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVA--GGI--KSLEDAAKILSFGADKISINSPALAD 109 +G + ++ P G + + + + S G I IN + Sbjct: 51 GILNGSKQSIQHILLKPNELNRPLIAQIWGNVPEQFYKAIEILGSMGFWGIDINMGCPKN 110 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 +I + + + + ++ N ++R + E +W+ + Sbjct: 111 K-IIKKGVCSALINNKSLAKEIILASKEACAKFNLPLSVKTRHGFSYPEIDNWLGFLLGF 169 Query: 170 GAGEIVLNMM-NQDGVRNGYDLEQLKKVRE-----VCHVPLIASGGAGTMEHFLEAFRDA 223 G + + + + D + ++ + +I +G +++ Sbjct: 170 GIDMLTVYPRLAVNQSKGPVDFDIFYELVKLRNNISPSTLIIGNGDVWSLKDARYYVDKY 229 Query: 224 DVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 +DG + K + + + R+ Sbjct: 230 LIDGIMFGRGIFKNLNLFKFSSKHFLDNNLNFRL 263 Score = 44.8 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 36/137 (26%), Gaps = 10/137 (7%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAE----- 71 VK ++ I + + + G D L Y A VD + + Sbjct: 148 VKTRHGFSYPEIDNWLGFLLGF---GIDMLTVYPRLAVNQSKGPVDFDIFYELVKLRNNI 204 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGID 130 G + SL+DA + D I + L + F + ++ Sbjct: 205 SPSTLIIGNGDVWSLKDARYYVDKYLIDGIMFGRGIFKNLNLFKFSSKHFLDNNLNFRLN 264 Query: 131 TWYDAETGKYHVNQYTG 147 + + Sbjct: 265 ILKFHIKDFHATWGFGK 281 >UniRef50_B7GNV1 N-acylglucosamine-6-phosphate 2-epimerase n=10 Tax=Actinobacteria (class) RepID=B7GNV1_BIFLI Length = 231 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 69/239 (28%), Gaps = 49/239 (20%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 +D G ++ Q E + +A+ V A+ + + +S + Sbjct: 12 IDSLHGTLIVSCQAYPGEPMRHPETMAQVAQS------VVIGGAAAIRCQG--LADISAI 63 Query: 70 AEVIDIPFCV-----AGGIK---SLEDAAKILSFGADKISINSPALADPT--LITRLADR 119 + +P G+ +L A + GAD +++++ P + + A + Sbjct: 64 KGQVKVPVIGIWKEGDNGVYITPTLRHARACIMAGADIVALDATDRPRPDGLTLQQTARQ 123 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN-- 177 + ++ D ++ G I Sbjct: 124 LKSEGAILMADCGC--------------------------IEDSDAAVDAGFDIISTTLA 157 Query: 178 -MMNQDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + G D E L ++ E HVP+I G T +A A+ + Sbjct: 158 GYTDSRAKTEGPDYELLAQMLERHPHVPVICEGRIHTPSDAAKAIE-MGAWAAVVGTAI 215 >UniRef50_UPI0001BC2F14 dihydrouridine synthase DuS n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F14 Length = 305 Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 51/153 (33%), Gaps = 5/153 (3%) Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 +G +++++N + + F + ++ +++ V + Sbjct: 81 YGYEEVNLNLGCPSGTVVAKNRGSGFL--AVPDELNRFFEEVFSMTDVRISVKTRTGVE- 137 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTM 213 + ++ + E++++ + G +LE KK + L +G ++ Sbjct: 138 NNENWENILKIYNEYPISELIIHPRCRKDGYGGKPNLEDFKKAVLISRHSLCYNGDINSV 197 Query: 214 EHFLEAFRD-ADVDGALAASVFHKQIINIGELK 245 E + ++ VD + E+K Sbjct: 198 EDYNAITKEFPTVDKIMCGRGILMNPGLFSEIK 230 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 33/103 (32%), Gaps = 5/103 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIP 76 VK + + + K Y E EL+ + G + + + Sbjct: 130 VKTRTGVENN--ENWENILKIYNEYPISELIIHPRCRKDGYGGKPNLEDFKKAVLISRHS 187 Query: 77 FCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLA 117 C G I S+ED I DKI L +P L + + Sbjct: 188 LCYNGDINSVEDYNAITKEFPTVDKIMCGRGILMNPGLFSEIK 230 >UniRef50_Q8CWK7 tRNA-dihydrouridine synthase A n=32 Tax=Gammaproteobacteria RepID=DUSA_VIBVU Length = 326 Score = 64.9 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 59/203 (29%), Gaps = 23/203 (11%) Query: 71 EVIDIPFCVAGGIKSLED----AAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 E + + G + +D A G D++++N +D R + Sbjct: 56 EEHPVALQLGG--SNPQDLATCAKLAAERGYDEVNLNVGCPSDRVQNGRFGACLMAEP-- 111 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRV--TQWETLDWVQEV-QKRGAGEIVLNMMNQDG 183 + A + + D+V V +K G + ++ Sbjct: 112 QLVADCVAAMKEVVDIPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWL 171 Query: 184 VRNGY---------DLEQLKKVREVCHVPLIA-SGGAGTMEHFLEAFRDADVDGALAASV 233 D + ++++ IA +GG ++E E + DG + Sbjct: 172 SGLSPKENREIPPLDYPRAYQLKKDFSHLTIAINGGVKSLEEAKEHLQHL--DGVMIGRE 229 Query: 234 FHKQIINIGELKAYLATQGVEIR 256 ++ + + L I+ Sbjct: 230 AYQSPYLLASVDQELFGSQSPIK 252 >UniRef50_B7FYN1 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FYN1_PHATR Length = 231 Score = 64.9 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 58/213 (27%), Gaps = 15/213 (7%) Query: 41 EEGADELV---FYDI--TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI-LS 94 GAD + D T + + + E + + G L AA + + Sbjct: 18 SYGADWVYTEELVDRALTGTIRVENKELGTID--YERGKLVCQLGSGEPDLALAAALHVH 75 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 D I +N ++ + + R Sbjct: 76 QDVDAIDLNMGCPKKFSVSGGMGSALLS-DPERACRIIRTLTENLSSKGIPVSAKIRLLK 134 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVRE-----VCHVPLIASG 208 T+ ++ + + GA I ++ L++V + H+P + +G Sbjct: 135 DVSSTVAFIAGLVEAGAKAIAVHGRQVSDDCTVPARWSMLREVIKEAVHRFPHIPFLLNG 194 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 T + F+ RD G L A Sbjct: 195 DFYTRDEFVSFMRDTGARGVLLARPALFNTSIF 227 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 7/101 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSR-VAEVI----DI 75 + R + + V E GA + + S D S + + E + I Sbjct: 129 KIRLLKDVSSTVAFIAGLVEAGAKAIAVHGRQVSDDCTVPARWSMLREVIKEAVHRFPHI 188 Query: 76 PFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITR 115 PF + G + ++ + + GA + + PAL + ++ + Sbjct: 189 PFLLNGDFYTRDEFVSFMRDTGARGVLLARPALFNTSIFCK 229 >UniRef50_Q468H4 NADH peroxidase n=5 Tax=cellular organisms RepID=Q468H4_METBF Length = 365 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 13/123 (10%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITASSDG------------RVVDKSWVSRVAEVIDI 75 I V +AK + G + + G + + ++I Sbjct: 235 DIFQAVEIAKLLEKAGVCAIEVSGGIGEAGGVTIRTAINTPAKEAYFRDCSKAIKSAVNI 294 Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P + GGI+SL +L G AD IS++ +++P ++ + + V + +D Sbjct: 295 PVILVGGIRSLSVINDLLENGSADMISMSRAFISEPDIVLKFKSGKVKKARCVSCNLCFD 354 Query: 135 AET 137 E Sbjct: 355 PEG 357 Score = 50.6 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 11/100 (11%), Positives = 33/100 (33%), Gaps = 12/100 (12%) Query: 159 TLDWVQEVQKRGAGEI----------VLNMMNQDGVRNGYDL--EQLKKVREVCHVPLIA 206 ++ + ++K G I + + + K ++ ++P+I Sbjct: 239 AVEIAKLLEKAGVCAIEVSGGIGEAGGVTIRTAINTPAKEAYFRDCSKAIKSAVNIPVIL 298 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 GG ++ + + D + F + + + K+ Sbjct: 299 VGGIRSLSVINDLLENGSADMISMSRAFISEPDIVLKFKS 338 >UniRef50_Q1MQG1 Dihydroorotate dehydrogenase n=2 Tax=Deltaproteobacteria RepID=Q1MQG1_LAWIP Length = 314 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 21/117 (17%) Query: 29 IGDIVPLAKRYAEEGADEL---------------------VFYDITASSDGRVVDKSWVS 67 + DI +AK GAD + + + + V Sbjct: 180 VTDITIIAKAVESAGADAISCINTLTGMAVDIRKRKSLLSTVIGGLSGPGIKPIALRCVW 239 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 V + ++IP GGI S D + + GA + I + P + R+A+ + C Sbjct: 240 EVCKAVNIPVIGIGGITSARDVLEFILVGAHAVQIGTMNFIQPDIAFRIAEALPIIC 296 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 26/199 (13%), Positives = 47/199 (23%), Gaps = 36/199 (18%) Query: 76 PFCVAGGIKSLED-----AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 P S+E+ A G + +N + F Q + Sbjct: 104 PVIANLYATSVEEFSELTAILAAEEGVAALEVNVSCPN-----VKSGGTFFGQDPSLAAK 158 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI----VLNMMNQD---- 182 + V+ GA I L M D Sbjct: 159 VTEAVCKNAGSKPVMVKLSPNVTDITI----IAKAVESAGADAISCINTLTGMAVDIRKR 214 Query: 183 --------GVRNGYDLEQLK-----KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 G +G ++ + +V + ++P+I GG + LE Sbjct: 215 KSLLSTVIGGLSGPGIKPIALRCVWEVCKAVNIPVIGIGGITSARDVLEFI-LVGAHAVQ 273 Query: 230 AASVFHKQIINIGELKAYL 248 ++ Q + L Sbjct: 274 IGTMNFIQPDIAFRIAEAL 292 >UniRef50_C9RDE9 Indole-3-glycerol-phosphate synthase n=1 Tax=Ammonifex degensii KC4 RepID=C9RDE9_AMMDK Length = 266 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 67/230 (29%), Gaps = 39/230 (16%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D V +A+ Y GA + G+ V ID+P + Sbjct: 64 RPDADPVKIARLYQRGGAAAVSVLVDERFFGGKPAFLRLVRW---EIDLPLLYKEFVLDP 120 Query: 87 EDAAKILSFGADKISINSPALADPTLI--TRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + GAD + + + L L LA G+ +V Sbjct: 121 YQVYEARLLGADAVLLIARLLRTEELRMLKELAASLGMDSLVEVHSR------------- 167 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV--CHV 202 D +Q+ GA I +N + R L+ + +R + V Sbjct: 168 ----------------DDLQKALAVGAEFIGINNRDLATFR--VSLQTTRLLRPLIPPEV 209 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 ++++ G + L R+ VD AL +L+ + Sbjct: 210 VVVSASGISSPL-ALTCLREWKVDAALIGEALMAAPDPEAKLRELVTAAE 258 >UniRef50_Q12ZA4 Putative uncharacterized protein n=5 Tax=Euryarchaeota RepID=Q12ZA4_METBU Length = 429 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE 71 +++ VV V+ ++ D + LA+ GAD L A +G D + R+ + Sbjct: 201 IKETGVVLSVK-VRANVVDD-IALARSIENAGADILHV---DAMKEGAGADLRAILRIRD 255 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 + I + DA + S GAD IS++ L D Sbjct: 256 STRLLLIGNNSIMDIMDARDMFSKGADMISVSRVVLED 293 >UniRef50_Q02X79 Dioxygenase n=3 Tax=Lactococcus lactis RepID=Q02X79_LACLS Length = 281 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 59/180 (32%), Gaps = 5/180 (2%) Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + V+ V+ + +GG ++ + +++ K +SP + L+ + Sbjct: 18 MAWATNVELVAVVSNNGALGIIGSGG-RTASELQEMIRQ--TKRLTSSPFGVNLMLLDKN 74 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 D+ I +L +++ + I+ Sbjct: 75 IDQLLQVICDEKISVVTTGAGSPKKYIDTIVANHIKLFPVVPSLKIAKKMLELPITGIIA 134 Query: 177 NMMNQDGVRNGYDLE-QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 G +L L+++ +C +PLIA+GG F A ++ GA + F Sbjct: 135 EGTEAGGHVGTQNLSSLLEEIASLCPLPLIAAGGIHDYHSFSSA-KNLGASGAQVGTAFL 193 Score = 42.5 bits (99), Expect = 0.012, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 1/82 (1%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKS-WVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + +AK+ E ++ A + S + +A + +P AGGI + Sbjct: 118 LKIAKKMLELPITGIIAEGTEAGGHVGTQNLSSLLEEIASLCPLPLIAAGGIHDYHSFSS 177 Query: 92 ILSFGADKISINSPALADPTLI 113 + GA + + L Sbjct: 178 AKNLGASGAQVGTAFLLAKECQ 199 >UniRef50_C6NVP5 tRNA-dihydrouridine synthase A n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVP5_9GAMM Length = 335 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 59/203 (29%), Gaps = 23/203 (11%) Query: 70 AEVIDIPFCVAGGIKSLEDAAKIL----SFGADKISINSPALADPTLITRLADRFGVQCI 125 A + + G E A+ +G +++N + P+ + + + Sbjct: 67 AAEQPLVLQLGGD--DPEAMARAAILARDYGYTGVNLN---VGCPSTRVQRGNFGACLML 121 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTR--VTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + + + D+V +V V++ N Sbjct: 122 TPALVREIIDALAGSGLPVSVKHRLGLDRQEDYGQLADFVAQVAAGSCRHFVVHARNAWL 181 Query: 184 VRNGYD---------LEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + + +++E + +GG T+ + + VDG + Sbjct: 182 RGLSPAANRTIPPLRWDWVARLKEDFPGLRFELNGGLDTVPKVEA--QWSRVDGVMIGRA 239 Query: 234 FHKQIINIGELKAYLATQGVEIR 256 + + + + EL+ L + R Sbjct: 240 AYHRPLFLTELELALGRRQAPAR 262 >UniRef50_O31546 Probable tRNA-dihydrouridine synthase 2 n=107 Tax=Bacteria RepID=DUS2_BACSU Length = 325 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 15/159 (9%), Positives = 45/159 (28%), Gaps = 12/159 (7%) Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + G + IN + +A ++ + ++R Sbjct: 91 MAELGFKGLDINMGCP-----VPNVAGNGKGSGLICRPAVAAELIQAAKAGGLPVSVKTR 145 Query: 152 TRVTQWE-TLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVRE-----VCHVPL 204 T + +W+ + K+ + +++ + + E + ++++ L Sbjct: 146 LGYTDVDEWREWLTHILKQDIANLSIHLRTRAEMSKVDAHWELIPEIKKLRDEVAPDTLL 205 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +G + L+ VDG + + Sbjct: 206 TINGDIPDRQTGLKLAEQYGVDGIMIGRGIFTNPFAFEK 244 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 30/105 (28%), Gaps = 9/105 (8%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAE----- 71 VK + + + ++ L + T + + + + + Sbjct: 142 VKTRLG--YTDVDEWREWLTHILKQDIANLSIHLRTRAEMSKVDAHWELIPEIKKLRDEV 199 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 D + G I + K+ +G D I I +P + Sbjct: 200 APDTLLTINGDIPDRQTGLKLAEQYGVDGIMIGRGIFTNPFAFEK 244 >UniRef50_Q0VMM0 2-nitropropane dioxygenase, putative n=2 Tax=Gammaproteobacteria RepID=Q0VMM0_ALCBS Length = 333 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 8/155 (5%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 I+ +A + ++ G +++ A L+ ++A C+ + +D + + Sbjct: 58 IRQEVEALRAINDGPFAVNLIPAATERRLLMDQVAT-----CLALQVDAFVFFWDVDTGL 112 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREVC 200 QY E + + Q Q GA +++ G G L L +V Sbjct: 113 VQYLKQEGKQVIYQVGNQRDADLAQSAGADVLIVQGHEAGGHVRGTTATLSLLPQVVANS 172 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 VP++ASGG + L AF G S F Sbjct: 173 DVPVVASGGIASGGAMLAAF-SMGAQGVSLGSAFL 206 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 36/113 (31%), Gaps = 2/113 (1%) Query: 36 AKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 A GAD L+ ++ G S + +V D+P +GGI S Sbjct: 133 ADLAQSAGADVLIVQGHEAGGHVRGTTATLSLLPQVVANSDVPVVASGGIASGGAMLAAF 192 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 S GA +S+ S LA + + + + +H Sbjct: 193 SMGAQGVSLGSAFLATHEANAHSHHKQRIVDARADDTVYTTRFSRNWHEPAPV 245 >UniRef50_A1AW94 TIM-barrel protein, yjbN family n=2 Tax=Gammaproteobacteria RepID=A1AW94_RUTMC Length = 322 Score = 64.5 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 59/179 (32%), Gaps = 16/179 (8%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + A +G ++I+IN ++ + V + DA V Sbjct: 74 AQAAKIAQDWGYNEININVGCPSNRVQSSNFGVCLMQTPQV--VAQCVDAMRQMVDVPIT 131 Query: 146 TGDESRTR--VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY---------DLEQLK 194 + E +++V V+ G +V++ + E++ Sbjct: 132 VKSRIGVDNMDSYDELVNFVATVESSGCDNLVIHARKAWLKGLSPKENRSVPKLNYERVY 191 Query: 195 KVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +++ + H+ + +GG ME L+ VD + + Q + ++ + + Sbjct: 192 QIKRDFPHLAIGINGGIMDMESSLQHLEH--VDSVMLGRAVYHQPYLLRKVDGLIYQKK 248 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 19/127 (14%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGD-IVPLAKRYAEEGADELVFYDITASSDG- 58 M +P VK ++ D +V G D LV + A G Sbjct: 122 MRQMVDVP-------ITVKSRIGVDNMDSYDELVNFVATVESSGCDNLVIHARKAWLKGL 174 Query: 59 --------RVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 ++ V ++ + + GGI +E + + L D + + Sbjct: 175 SPKENRSVPKLNYERVYQIKRDFPHLAIGINGGIMDMESSLQHLEH-VDSVMLGRAVYHQ 233 Query: 110 PTLITRL 116 P L+ ++ Sbjct: 234 PYLLRKV 240 >UniRef50_UPI000038257B COG1902: NADH:flavin oxidoreductases, Old Yellow Enzyme family n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI000038257B Length = 254 Score = 64.1 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 35/122 (28%), Gaps = 6/122 (4%) Query: 28 IIGDIVPLAKRYAEEGADELVFY--DITASSD---GRVVDKSWVSRVAEVIDIPFCVAGG 82 + + LA+ GA + ++ + G + R+ + G Sbjct: 126 DLDQTLELARALKSRGAAAIHVSTGGLSPAQKIPVGPGYQVPFAERIKAETGLTTIAVGL 185 Query: 83 IKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I A IL+ G AD IS+ L DP A G Q K Sbjct: 186 ITEPRQAEAILAEGKADAISLARAVLYDPRWPWHAAAELGAQVRAPKQYWRSQPHQYKDL 245 Query: 142 VN 143 Sbjct: 246 FK 247 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 10/121 (8%) Query: 143 NQYTGDESRTRVTQW--ETLDWVQEVQKRGAGEIVLN--MMNQDGV---RNGYDLEQLKK 195 +TL+ + ++ RGA I ++ ++ GY + ++ Sbjct: 112 WMRVSATDWVEEGWDLDQTLELARALKSRGAAAIHVSTGGLSPAQKIPVGPGYQVPFAER 171 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 ++ + IA G + D A A L Q + Sbjct: 172 IKAETGLTTIAVGLITEPRQAEAILAEGKADAISLARAVLYDPRWPWHAAAELGAQ---V 228 Query: 256 R 256 R Sbjct: 229 R 229 >UniRef50_Q5SMC7 tRNA-dihydrouridine synthase n=3 Tax=Thermus RepID=Q5SMC7_THET8 Length = 342 Score = 64.1 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 21/189 (11%) Query: 71 EVIDIPFCVAG-GIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVG 128 E I +AG KSL +AA+I G D+I++N ++ + Sbjct: 56 EEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLA--R 113 Query: 129 IDTWYDAETGKYHVNQYTGDESRTR--VTQWETLDWVQEVQKRGAGEIVLNMMN------ 180 + A V T V+ + + G V++ + Sbjct: 114 VREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALS 173 Query: 181 ----QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++ +D + +++ + + + +GG ++E L + VDG + + Sbjct: 174 TKANREIPPLRHDW--VHRLKGDFPQLTFVTNGGIRSLEEALFHLKR--VDGVMLGRAVY 229 Query: 236 KQIINIGEL 244 + + E Sbjct: 230 EDPFVLEEA 238 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 11/109 (10%) Query: 18 VKGVQFRNHEIIGDIVPL-AKRYAEEGADELVFYDITAS--------SDGRVVDKSWVSR 68 VK + + + AE G V + +A + + WV R Sbjct: 131 VKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHR 190 Query: 69 VAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + F GGI+SLE+A L D + + DP ++ Sbjct: 191 LKGDFPQLTFVTNGGIRSLEEALFHLKR-VDGVMLGRAVYEDPFVLEEA 238 >UniRef50_Q2C3Y8 Putative oxidoreductase protein n=3 Tax=Gammaproteobacteria RepID=Q2C3Y8_9GAMM Length = 343 Score = 64.1 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 11/91 (12%) Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVR----------NGYDLEQLKKVREVCHVPL 204 + TL+ ++K GA I+ + G R +E L ++ VP+ Sbjct: 152 SSATTLEEAIWLEKHGADIIIAQGVEAGGHRAMFLTNDLNSQMPTVELLLALQSHVSVPI 211 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +A+GG G+ + + + G + F Sbjct: 212 VAAGGIGSKDDIRK-LVELGSSGVQVGTAFL 241 Score = 53.7 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 10/86 (11%) Query: 32 IVPLAKRYAEEGADELVFYD----------ITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + A + GAD ++ +T + ++ + + + +P AG Sbjct: 156 TLEEAIWLEKHGADIIIAQGVEAGGHRAMFLTNDLNSQMPTVELLLALQSHVSVPIVAAG 215 Query: 82 GIKSLEDAAKILSFGADKISINSPAL 107 GI S +D K++ G+ + + + L Sbjct: 216 GIGSKDDIRKLVELGSSGVQVGTAFL 241 >UniRef50_C9M6H2 Dihydroorotate oxidase n=2 Tax=Synergistaceae RepID=C9M6H2_9BACT Length = 317 Score = 63.7 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 21/112 (18%) Query: 31 DIVPLAKRYAEEGADELVFY-----------------DITASSDGRVV----DKSWVSRV 69 D +AK + GA LV D + V +V Sbjct: 176 DPCAVAKAAQDAGASALVVANTWLGAAIDTVKARPAFDRVVAGLSGPAIFPLALRMVWQV 235 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +DIP GG+ S + A +L GA + + +D +++ R+A Sbjct: 236 CGAVDIPVVGCGGVASADSAVAMLMAGAAAVEVGMALFSDFSVLERIARGLE 287 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/189 (11%), Positives = 48/189 (25%), Gaps = 31/189 (16%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 LE + A + ++ P C+ G+D A+ + + Sbjct: 110 DLERILDAMEPVAPSVDCVELNVSCP--------NVDQGCMSWGVDPALTAQAVQQVRRR 161 Query: 145 YTGDESRT-RVTQWETLDWVQEVQKRGAGEIVLN-----------------MMNQDGVRN 186 ++G + + Q GA +V+ G+ Sbjct: 162 WSGPLWVKLTPQAPDPCAVAKAAQDAGASALVVANTWLGAAIDTVKARPAFDRVVAGLSG 221 Query: 187 GY----DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 L + +V +P++ GG + + + A + Sbjct: 222 PAIFPLALRMVWQVCGAVDIPVVGCGGVASADSAVAMLM-AGAAAVEVGMALFSDFSVLE 280 Query: 243 ELKAYLATQ 251 + L + Sbjct: 281 RIARGLEEE 289 >UniRef50_B5RQ77 Histidine phosphokinase/phophatase, putative n=4 Tax=Borrelia RepID=B5RQ77_BORRA Length = 339 Score = 63.7 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 16/164 (9%), Positives = 51/164 (31%), Gaps = 7/164 (4%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 ++ + + G I +N ++ + + + + ++ Sbjct: 95 VKAIEILSNLGFWGIDLNMGCPKKK-IVKKGVCSALINNKSLAHEIIIASKEACLKYGLP 153 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ-DGVRNGYDLEQLKKVREVCH--- 201 ++R E DW+ + K G + ++ + D+ ++ ++ + Sbjct: 154 LSVKTRHGFFCSEVEDWLGFLLKLGIDMLTVHPRLVINQSEGPIDVNVFDELVKLRNKIN 213 Query: 202 --VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 V +I +G ++ + +DG + K + Sbjct: 214 PYVVIIGNGDVLSLNQAYQMINKYSIDGIMFGRGILKNLNLFRR 257 Score = 40.2 bits (93), Expect = 0.068, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 38/137 (27%), Gaps = 10/137 (7%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAE----- 71 VK + D + + G D L + +D + + + Sbjct: 156 VKTRHGFFCSEVEDWLGFLLKL---GIDMLTVHPRLVINQSEGPIDVNVFDELVKLRNKI 212 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + G + SL A ++++ D I L + L R F + ++ Sbjct: 213 NPYVVIIGNGDVLSLNQAYQMINKYSIDGIMFGRGILKNLNLFRRDEPNFLDSDLNFRLN 272 Query: 131 TWYDAETGKYHVNQYTG 147 T + T Sbjct: 273 ILKLHITDFHSTWGITK 289 >UniRef50_B7APY3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APY3_9BACE Length = 321 Score = 63.7 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 19/191 (9%), Positives = 56/191 (29%), Gaps = 11/191 (5%) Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 G + + ++ I++L D +G D++++N + + Sbjct: 61 SGNNRPRDVIPQILSNNSCDCIKV--IRALHD-----EYGYDEVNLNLGCPSPTVVTKHK 113 Query: 117 ADRF-GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 F + GK V + + E + + + E++ Sbjct: 114 GAGFLAFPDKLDSFLNDVFVAAGKDGVRVSVKTRTGVE-SHDEFIKILDIYNQYPLSELI 172 Query: 176 LNMM-NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF-RDADVDGALAASV 233 ++ +D +N D + + P+ +G +++ + R ++ + Sbjct: 173 VHPRVQKDLYKNSPDYDIFEYAYTNSKAPVCYNGDICSVDDYQRITSRFNGLNAVMCGRG 232 Query: 234 FHKQIINIGEL 244 + Sbjct: 233 MITNPAIFATI 243 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 34/109 (31%), Gaps = 7/109 (6%) Query: 13 RDGQ--VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRV 69 +DG VK + + + Y + EL+ + D Sbjct: 137 KDGVRVSVKTRTGVESHD--EFIKILDIYNQYPLSELIVHPRVQKDLYKNSPDYDIFEYA 194 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRL 116 P C G I S++D +I S G + + + +P + + Sbjct: 195 YTNSKAPVCYNGDICSVDDYQRITSRFNGLNAVMCGRGMITNPAIFATI 243 >UniRef50_Q3AL94 Indole-3-glycerol phosphate synthase n=13 Tax=Cyanobacteria RepID=TRPC_SYNSC Length = 295 Score = 63.7 bits (154), Expect = 6e-09, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 62/222 (27%), Gaps = 29/222 (13%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +AK YA GA L G + V + +D+P + S Sbjct: 100 DPVAIAKAYASGGASCLSVLTDKTFFQGG---FDVLVEVRQAVDLPLLCKEFVLSPYQLF 156 Query: 91 KILSFGADKISINSPALADPTLI--TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + + GAD + + + L+D L + A G+ +V D G Sbjct: 157 QARAAGADAVLLIAAILSDQDLRYLNKAAAALGLTVLVEVHDATEMDRVLSIGGFPLIGI 216 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 +R + L + + + N + V L++ Sbjct: 217 NNRDLTSFETDLATTERL------LVDFNDRLKQQ-----------------GVLLVSES 253 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G + + A L +Q L + Sbjct: 254 GLFSRADLDRV-QAAGAGAVLVGEALMRQQDVEAGLVQLIQA 294 >UniRef50_A8ZX83 Dihydrouridine synthase DuS n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX83_DESOH Length = 324 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 42/160 (26%), Gaps = 9/160 (5%) Query: 89 AAKILSFGADK--ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 A + G ++ P I +DT G V Sbjct: 79 ADHLYDLGYSVTNWNLGCPYPMVAKKYRGAGLLPHTDRIAEFLDTVMSRMKGGLSVKIRL 138 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLI 205 G E + + + + E++++ G DL ++V E +P++ Sbjct: 139 GW-----ADTTELMGLLPVLHRYPLAELIVHPRTGIQRYEGTVDLAAFERVLENTGLPVM 193 Query: 206 ASGGAGTMEHFLEAFRDADV-DGALAASVFHKQIINIGEL 244 +G T+ F D + + Sbjct: 194 YNGDIQTVADFAYLSGRFKAVDRWMIGRGALADPFLPAAI 233 Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 7/110 (6%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 ++ G VK +++ L EL+ + T VD + RV Sbjct: 128 MKGGLSVKIRLGW--ADTTELMGLLPVLHRYPLAELIVHPRTGIQRYEGTVDLAAFERVL 185 Query: 71 EVIDIPFCVAGGIKSLEDAAKI---LSFGADKISINSPALADPTLITRLA 117 E +P G I+++ D A + D+ I ALADP L + Sbjct: 186 ENTGLPVMYNGDIQTVADFAYLSGRFKA-VDRWMIGRGALADPFLPAAIG 234 >UniRef50_A2QAU6 tRNA-dihydrouridine synthase 3 n=6 Tax=Leotiomyceta RepID=DUS3_ASPNC Length = 748 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 18/187 (9%), Positives = 39/187 (20%), Gaps = 41/187 (21%) Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 I +N D + + T+ Sbjct: 444 IDLNCGCPIDLVFKDGAGSALLEHPSKLEKIIRGMNTVSDQ-IPITVKIRMGTKDNNPNA 502 Query: 160 LDWVQEVQKRG-------------AGEIVLNMMNQDGVRN-GYDLEQLKKVREVCH---- 201 L + + G A I L+ ++ D E + + + Sbjct: 503 LKLTERLLLGGYETSLLHHDGAAGAAAITLHGRSRQQRYTRQADWEYISECAALIKRLNE 562 Query: 202 ----------------------VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 V + +G + + +A VD + + Sbjct: 563 KTDAVTDTIREPDARTQPNGGKVYFLGNGDCYSHVDYDNHINNAGVDAVMLGRGPLIKPW 622 Query: 240 NIGELKA 246 E++A Sbjct: 623 LFEEIQA 629 Score = 41.4 bits (96), Expect = 0.030, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 44/159 (27%), Gaps = 29/159 (18%) Query: 47 LVFYDITASS-DGRVVDKSWVSRVA----------EVI----------------DIPFCV 79 + + + R D ++S A + + + F Sbjct: 530 ITLHGRSRQQRYTRQADWEYISECAALIKRLNEKTDAVTDTIREPDARTQPNGGKVYFLG 589 Query: 80 AGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 G S D ++ G D + + L P L + + Sbjct: 590 NGDCYSHVDYDNHINNAGVDAVMLGRGPLIKPWLFEEI-QAGQYLDKSATERLAMIEKFC 648 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 KY + + DE T+ ++W+ ++ ++ + Sbjct: 649 KYGLEAWGSDEHGVGTTRRFLMEWLSFTRRYVPIGLLEH 687 >UniRef50_B8P1L7 Predicted protein (Fragment) n=3 Tax=Basidiomycota RepID=B8P1L7_POSPM Length = 313 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 17/160 (10%), Positives = 48/160 (30%), Gaps = 11/160 (6%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA+ + +N + + + ++ A Sbjct: 89 QAARTVVQDVAGFDLNCGCPKPFSTHSGMGAALLSNPDLLCS--ILTALREAMPPEISIS 146 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVC-----H 201 + R +Q +TL V+ + G + ++ ++ + +++L+++ + Sbjct: 147 AKIRLLPSQEDTLKLVERIVNTGVNALTVHCRTRNMRKREKAHIDRLREIVDFVRGLGRD 206 Query: 202 VPLIASGGAGTMEHFLEAFRDA---DVDGALAASVFHKQI 238 V LI +G + + D + A+ Sbjct: 207 VALIENGDCEDYQDAIRIREITGYVGADSVMIATAAEANP 246 Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 45/158 (28%), Gaps = 19/158 (12%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVI-----DIPFCVAGGI 83 D + L +R G + L + T + R + + + + D+ G Sbjct: 156 EDTLKLVERIVNTGVNALTVHCRTRNMRKREKAHIDRLREIVDFVRGLGRDVALIENGDC 215 Query: 84 KSLEDAAKILSF----GADKISINSPALADP---------TLITRLADRFGVQCIVVGID 130 + +DA +I GAD + I + A A+P + ++ C + Sbjct: 216 EDYQDAIRIREITGYVGADSVMIATAAEANPTCFSPNPLTDVEMTFIPQYMRLCRYLNNH 275 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + + + + + Sbjct: 276 WSSTKFCTAQFKGSHVNARRADLKGLRDAIQKAKSYED 313 >UniRef50_C9SVF6 tRNA-dihydrouridine synthase n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SVF6_VERA1 Length = 325 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 32/105 (30%), Gaps = 7/105 (6%) Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVC 200 + R T+ TL + V + GA + ++ ++ D ++ +R+ Sbjct: 89 IPVTAKIRILDTREATLAYALNVLRAGASILTVHGRRREQKGHLTGLADWSTIRWLRDQL 148 Query: 201 HVP---LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 P L A+G + D ++A Sbjct: 149 P-PETVLFANGNILEHGDLAKCLEATGADAVMSAEGNLSDPGLFA 192 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 30/92 (32%), Gaps = 8/92 (8%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIP---FCVAGGI 83 + A GA L + G + D S + + + + P G I Sbjct: 102 EATLAYALNVLRAGASILTVHGRRREQKGHLTGLADWSTIRWLRDQLP-PETVLFANGNI 160 Query: 84 KSLEDAAKILSF-GADKISINSPALADPTLIT 114 D AK L GAD + L+DP L Sbjct: 161 LEHGDLAKCLEATGADAVMSAEGNLSDPGLFA 192 >UniRef50_C7NTV9 Dihydropyrimidine dehydrogenase n=10 Tax=Halobacteriaceae RepID=C7NTV9_HALUD Length = 262 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 55/187 (29%), Gaps = 14/187 (7%) Query: 49 FYDITASSDGRVVDKSWV-SRVAEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSP 105 D ++ ++ + D P ++S E +I AD +I Sbjct: 56 VEDRDREEFLPANPFAFADEQLNRLADEPLVAGLNVRSASREPLERIAESCADHGAICE- 114 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 L + + + ++ D + RT + + L + Sbjct: 115 -LNAHCRQDEMCETGAGEALLAEPDRLAKQVETAADAGATVSVKVRTEIDGVDLLAVARR 173 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 ++ GA + ++ M+ +G + ++ + +IA+ G E E Sbjct: 174 IEAAGADAVHVDAMDSEG--------VVAEIVAATDLFVIANNGVRDRETVREYL-ACGA 224 Query: 226 DGALAAS 232 D Sbjct: 225 DAVSVGR 231 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 8/86 (9%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 V+ R D++ +A+R GAD + A V+ + D+ Sbjct: 155 SVKVRTEIDGVDLLAVARRIEAAGADAVHV---DAMDSEG-----VVAEIVAATDLFVIA 206 Query: 80 AGGIKSLEDAAKILSFGADKISINSP 105 G++ E + L+ GAD +S+ P Sbjct: 207 NNGVRDRETVREYLACGADAVSVGRP 232 >UniRef50_C6J447 Indole-3-glycerol phosphate synthase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J447_9BACL Length = 279 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 34/209 (16%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V LA Y G D + G ++S + E +++P + + Sbjct: 73 PVQLAAAYEAAGTDCISVLTDETYFQGSGA---YLSAIREAVNVPLLRKDFVIDERQIYE 129 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 GAD + + + L+D L L+ G ++ Sbjct: 130 ARLLGADAVLLIAAILSDAQLRDYLSIA------------------------TALGLDAL 165 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASGG 209 V E L+ V + A I +N N LE + E+ LI+ G Sbjct: 166 IEVHDREELERVLMLPA--AKLIGINNRN--LRTFEVSLETTAALAELVPSSATLISESG 221 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQI 238 T + + + G L F ++ Sbjct: 222 IQTRQDV-KYLQQTGAQGVLIGETFMRRE 249 >UniRef50_UPI0001BCB21D enoyl-[acyl-carrier-protein] reductase n=1 Tax=Fusobacterium periodonticum ATCC 33693 RepID=UPI0001BCB21D Length = 331 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 2/117 (1%) Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 CI G+ + + T+ + ++K GA +++ M Sbjct: 95 MNVCIEEGVQVITTGAGNPGAFMDKLKAANIKVIPVIPTVKLAERMEKIGADAVIVEGME 154 Query: 181 QDGV-RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 G + L ++ +P+IA+GG + + FL A D ++F Sbjct: 155 SGGHIGTLTTMALLPQIVNAVSIPVIAAGGIASGKQFLAAL-SMGADAVQCGTIFLT 210 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Query: 32 IVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 V LA+R + GAD ++ + + G + + + ++ + IP AGGI S + Sbjct: 133 TVKLAERMEKIGADAVIVEGMESGGHIGTLTTMALLPQIVNAVSIPVIAAGGIASGKQFL 192 Query: 91 KILSFGADKISINSPALADPTLITR 115 LS GAD + + L I Sbjct: 193 AALSMGADAVQCGTIFLTAKECIIH 217 >UniRef50_C6MNJ9 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Geobacter sp. M18 RepID=C6MNJ9_9DELT Length = 348 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 3/119 (2%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVS---RVAEVIDIPFCVA 80 N + D+ + + G + + F +V + DIP V Sbjct: 227 ENEQYTSDLKKMIPEFKRLGVEAVEFSGSNFIHMKYSDHNYFVESAMNLKGNTDIPVIVV 286 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 GGI++ ED +L G D ISI+ P +++P LITRL + + + Sbjct: 287 GGIRNFEDMEAVLEAGVDMISISRPLISEPDLITRLKNGQEKARCASCNKCFIVGKKRC 345 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 4/92 (4%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDL--EQLKKVREVCHVPLIASGGAGTME 214 + + E ++ G + + N + ++ E ++ +P+I GG E Sbjct: 234 DLKKMIPEFKRLGVEAVEFSGSNFIHMKYSDHNYFVESAMNLKGNTDIPVIVVGGIRNFE 293 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIGELKA 246 A VD + + I LK Sbjct: 294 DMEAVLE-AGVDMISISRPLISEPDLITRLKN 324 >UniRef50_D1CBJ4 Indole-3-glycerol-phosphate synthase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBJ4_THET1 Length = 270 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 59/206 (28%), Gaps = 31/206 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A+ Y A + +T + V+ + IP I Sbjct: 75 DPVWMARVYQNARASAISV--LTDEKYFGGS-LDDLQSVSSQVGIPVLRKDFILDEYQVV 131 Query: 91 KILSFGADKISINSPAL--ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + + GAD I + AL + A G+ +V D G Sbjct: 132 ESRANGADAILLIVRALTGDKLACLINAASELGMDALVEVHDEEDVDLALASGAR-LIGI 190 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 +R + T++ Q + + ++ D E L +I+ Sbjct: 191 NNRDLESFHTTIEVTQRLAPY--------IRDR------TDSEVL----------VISES 226 Query: 209 GAGTMEHFLEAFRDADVDGALAASVF 234 G + E+ + A D L Sbjct: 227 GIFSRSDV-ESVQAAGADAVLVGEAL 251 >UniRef50_B2A0N8 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0N8_NATTJ Length = 331 Score = 63.3 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 20/179 (11%), Positives = 49/179 (27%), Gaps = 16/179 (8%) Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQC------------IVVGIDTWYDAET 137 + + G D + I+ F + V D Sbjct: 153 ERAMEAGFDGVEIHGAHGFLLNQFNSPLTNFRQDKYGGSRKNRARLSLEVASDLKEVVGN 212 Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL---NMMNQ-DGVRNGYDLEQL 193 D +T + + +E+ + G I + + + GY + Sbjct: 213 KLLLYRLGATDGYDKGLTMPDAIWIAKELVRNGVDIIDVSGGHGGYRGHTRSQGYFVPIA 272 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 ++++ P++ +GG + ++ E + +D + K L + Sbjct: 273 VEIKQNLTQPVMVAGGISSPQYANEVIEEEGLDFVGVGRALLSRPDWPYMAKQELINRK 331 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 5/95 (5%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG----RVVDKSWVSRVAEVIDIPFCV 79 + D + +AK G D + G + + + + P V Sbjct: 226 DKGLTMPDAIWIAKELVRNGVDIIDVSGGHGGYRGHTRSQGYFVPIAVEIKQNLTQPVMV 285 Query: 80 AGGIKSLEDAAKIL-SFGADKISINSPALADPTLI 113 AGGI S + A +++ G D + + L+ P Sbjct: 286 AGGISSPQYANEVIEEEGLDFVGVGRALLSRPDWP 320 >UniRef50_C4KIS5 Geranylgeranylglyceryl phosphate synthase n=13 Tax=Sulfolobaceae RepID=GGGPS_SULIK Length = 255 Score = 63.3 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 11/126 (8%) Query: 1 MLAKRIIP---CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDIT 53 ML +IP + G + I D LA Y G D + + Sbjct: 130 MLQIEVIPTAYVIVGHGGTAAHI--GKARVIPYDNFELATAYTLAAEYLGMDFVYLEAGS 187 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + + + +S + + IP + GGI+S+E A K++ GA+ I + D Sbjct: 188 GAPE--PIRPEMISFIKKASSIPLIIGGGIRSVEVALKLVEAGANIIVTGNIIERDVDKA 245 Query: 114 TRLADR 119 ++ Sbjct: 246 IKIIRG 251 Score = 39.8 bits (92), Expect = 0.089, Method: Composition-based stats. Identities = 12/108 (11%), Positives = 34/108 (31%), Gaps = 3/108 (2%) Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 + + G + L G E + +++ +P Sbjct: 151 HIGKARVIPYDNFELATAYTLAAEYLGMDFVYLE--AGSGAPEPIRPEMISFIKKASSIP 208 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 LI GG ++E L+ +A + + ++ + + ++ + + Sbjct: 209 LIIGGGIRSVEVALK-LVEAGANIIVTGNIIERDVDKAIKIIRGIKNK 255 >UniRef50_B8ZUG3 Pyridoxal biosynthesis lyase pdxS n=332 Tax=cellular organisms RepID=PDXS_MYCLB Length = 307 Score = 63.3 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 61/230 (26%), Gaps = 17/230 (7%) Query: 34 PLAKRYAEEGADELVFYDIT----ASSDG--RVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 A+ GA ++ + + G R+ D + + + IP I Sbjct: 42 EQARIAEGSGAVAVMALERVPSDIRAQGGVSRMSDPDMIESIIAAVTIPVMAKARIGHFV 101 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +A + S G D I + +F V + E + Sbjct: 102 EAQILQSLGVDYIDESEVLTPADYTHHIDKWKFTVPFVCGAT---NLGEALRRINEGAAM 158 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-----GYDLEQLKKVREVCHV 202 S+ + + ++ L +++D + E + +V + Sbjct: 159 IRSKGEAGTGDVSNATTHMRAIAGDIRRLTSLSEDELYVAAKELHAPYELVIEVARTNKL 218 Query: 203 PL--IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 P+ +GG T +G S K A + Sbjct: 219 PVTLFTAGGIATPADA-AMMMQLGAEGIFVGSGIFKSSDPAQRAAAIVKA 267 >UniRef50_C7GEK5 NADH:flavin oxidoreductase, Old Yellow Enzyme family n=12 Tax=Bacteria RepID=C7GEK5_9FIRM Length = 644 Score = 63.3 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 53/181 (29%), Gaps = 20/181 (11%) Query: 4 KRIIP--CLDVRDGQVVKG----VQFRNHEIIGDIVPLAKRYAEEGADELVFY------- 50 K I+P +D + V + + + AK G D L Sbjct: 203 KTIVPDMVIDYKLPIVTPLGENSFRGKGGLPFDEACIFAKELEACGVDTLHVAQANHTGN 262 Query: 51 --DITASSDGRVV--DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSP 105 D + + S+ ++ E++ IP V G I + E A +++ G AD I + Sbjct: 263 MGDTIPAMGTQPYGFMVSYSKKIKELVSIPVSVVGRIVTPEAAEAVIANGSADIIGLGRS 322 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 L DP + AD C V T + T Sbjct: 323 LLTDPDFANKCADG--HCCNVRTCMMCNKGCTDNIQNRAFLSCVLNAENGYEATRHITPA 380 Query: 166 V 166 Sbjct: 381 A 381 Score = 39.8 bits (92), Expect = 0.081, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 28/93 (30%), Gaps = 11/93 (11%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRN-----------GYDLEQLKKVREVCHVPLIA 206 E + +E++ G + + N G G+ + KK++E+ +P+ Sbjct: 236 EACIFAKELEACGVDTLHVAQANHTGNMGDTIPAMGTQPYGFMVSYSKKIKELVSIPVSV 295 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 G T E + D Sbjct: 296 VGRIVTPEAAEAVIANGSADIIGLGRSLLTDPD 328 >UniRef50_Q01YA2 Dihydroorotate dehydrogenase n=5 Tax=Bacteria RepID=PYRD_SOLUE Length = 304 Score = 63.3 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 21/110 (19%) Query: 35 LAKRYAEEGADELVFYD--------------ITASSDG-------RVVDKSWVSRVAEVI 73 LA+ E GAD L + + G + + +V + A + Sbjct: 177 LARVAEESGADALSLVNTVISLAIDARTRRPRIGAGFGGLSGPAIKPIALRFVYQAARAV 236 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 IP GGI + EDAA+ L GA + + + DP R+A+ G Sbjct: 237 RIPVIGLGGIATGEDAAEFLIAGASAVEVGTATFWDPRAPLRIAEELGKF 286 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 34/118 (28%), Gaps = 26/118 (22%) Query: 162 WVQEVQKRGAGEI---------VLNMMNQD-------GVRNGYDLEQLK-----KVREVC 200 + ++ GA + ++ + G +G ++ + + Sbjct: 177 LARVAEESGADALSLVNTVISLAIDARTRRPRIGAGFGGLSGPAIKPIALRFVYQAARAV 236 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI----INIGELKAYLATQGVE 254 +P+I GG T E E A + EL +L +G+ Sbjct: 237 RIPVIGLGGIATGEDAAEFL-IAGASAVEVGTATFWDPRAPLRIAEELGKFLEREGIR 293 >UniRef50_C4FAV3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAV3_9ACTN Length = 649 Score = 63.0 bits (152), Expect = 9e-09, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 55/178 (30%), Gaps = 22/178 (12%) Query: 10 LDVRDGQVVKGVQFRNHEI----IGDIVPLAKRYAEEGADELVFYDITASSDG------- 58 +DVR + + + D++ +++R + G D + T G Sbjct: 220 IDVR-------ISGDEYTDGGLTLNDMIYVSRRLEKAGVDMIHVSGGTTIKRGSAIPAAG 272 Query: 59 --RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITR 115 + + + + IP G I A +++ G AD + L D + Sbjct: 273 TKQASHADLSREIKKHVTIPVATVGRINEAWIAEELIEDGAADICMMGRANLCDAEFCNK 332 Query: 116 -LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 A R +G + ++ + +E ++V GAG Sbjct: 333 AAAGRAEEVRPCIGCLRCLNGIMFGKPISCTVNPDVEHDEAGFEPAAEKKDVLVVGAG 390 >UniRef50_Q5ZVH8 Zinc binding TIM barrel protein, YjbN family n=6 Tax=Legionella RepID=Q5ZVH8_LEGPH Length = 334 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 64/197 (32%), Gaps = 14/197 (7%) Query: 72 VIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + + G KS + A G ++I++N +D R + V Sbjct: 63 EHPLAIQLGGADKSALVKCAIIAEQKGFNEINLNLGCPSDKVQAGRFGACLMKEPEHVAD 122 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---- 185 + V T + + + + + G +++++ Sbjct: 123 CIRAIKQVVGIPVTAKTRIGIDNQDSYEFFRSFSLHLVEAGCDKLIIHARKAWLNGLNPK 182 Query: 186 -----NGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + + + +++ E+ H+ + +G T+E + VDG + + Sbjct: 183 QNRTIPPVNYDYVYELKKEIPHIFITINGNILTVEEINNHLKH--VDGVMLGRLACDNPY 240 Query: 240 NIGELKAYLATQGVEIR 256 I E+ L + ++I+ Sbjct: 241 QIAEIHQALYPEFIKIK 257 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 55/162 (33%), Gaps = 26/162 (16%) Query: 39 YAEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVID-IPFCVAGGIKSLED 88 E G D+L+ + A +G V+ +V + + I I + G I ++E+ Sbjct: 159 LVEAGCDKLIIHARKAWLNGLNPKQNRTIPPVNYDYVYELKKEIPHIFITINGNILTVEE 218 Query: 89 AAKILSFGADKISINSPALADP--------TLITRLADRFGVQCIVVGIDTWYDAETGKY 140 L D + + A +P L Q ++ +D W+D Sbjct: 219 INNHLKH-VDGVMLGRLACDNPYQIAEIHQALYPEFIKIKRSQLLMNYLDYWFDQSRANL 277 Query: 141 HVNQYTGDES-------RTRVTQWETLDWVQEVQKRGAGEIV 175 ++ + + + ++ +QE G E++ Sbjct: 278 SLSILVKPLFNLAFGLPGAKHWKKKLMNIIQEKNTSGFSELI 319 >UniRef50_C1TMB2 Dihydroorotate dehydrogenase family protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMB2_9BACT Length = 304 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 34/115 (29%), Gaps = 21/115 (18%) Query: 31 DIVPLAKRYAEEGADELVFY-----------------DITASSDGRVV----DKSWVSRV 69 D +A+ + GAD LV D + V +V Sbjct: 173 DPEGVARAAEDSGADALVVANTWLGMAIDVDSRKAVFDRVVAGFSGPAVFPMALRLVWQV 232 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 + + IP GG+ S D ++ GA + + + D L + Sbjct: 233 SSAVSIPVIGCGGVSSGRDLLSMIMAGATAVELGTGMFRDIRLPENILREVKAYM 287 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 61/216 (28%), Gaps = 44/216 (20%) Query: 71 EVIDIPFCVAGGIKSLED-------AAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + +P S+ED +++ AD + ++ P + Sbjct: 90 KSYGVPIIAN---VSMEDERGLALIVERLVEV-ADCVDAIELNVSCPNVDKGCMSW---- 141 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL------N 177 V + T + + + + + GA +V+ Sbjct: 142 -GVSPVLTSQAVSMVQKIWKGPLWVKM--TPQAPDPEGVARAAEDSGADALVVANTWLGM 198 Query: 178 MMNQDGVRNGYD---------------LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 ++ D + +D L + +V +P+I GG + L Sbjct: 199 AIDVDSRKAVFDRVVAGFSGPAVFPMALRLVWQVSSAVSIPVIGCGGVSSGRDLLSMIM- 257 Query: 223 ADVDGALAASVFHKQ----IINIGELKAYLATQGVE 254 A + + + E+KAY+ + VE Sbjct: 258 AGATAVELGTGMFRDIRLPENILREVKAYMTKEKVE 293 >UniRef50_B1L6Q8 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=GGGPS_KORCO Length = 244 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 64/222 (28%), Gaps = 13/222 (5%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA+ +E GAD + S + V + +IP + G +++ + Sbjct: 31 KLARAASEGGADLIFV---GGSIGAGFRINEIILSVKKESNIPIILFPG--NVDGVSPYA 85 Query: 94 SFGADKISINSPALADP--TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 +NS + + + Sbjct: 86 DAILFMSLLNSTNPYWIIQAQALAAIPIRRMGLEAIPTAYLIVEPGQRSAAGWVGSVNPI 145 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 R L + + G I L G E ++ VRE ++ +I GG Sbjct: 146 PRDKPEIALAYATAAEMLGMRWIYLE--AGSGAEAPVPSEMVRLVRERTNLGIIVGGGLR 203 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQII---NIGELKAYLAT 250 + E + +A + + + + ++ E+K L + Sbjct: 204 SPE-LVRERAEAGANVIVVGTHIEEGRDALASVREMKEALKS 244 Score = 49.9 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 2/73 (2%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + A G + + + V V E ++ V GG++S E + Sbjct: 153 ALAYATAAEMLGMRWIYLEAGSGAEAPVPS--EMVRLVRERTNLGIIVGGGLRSPELVRE 210 Query: 92 ILSFGADKISINS 104 GA+ I + + Sbjct: 211 RAEAGANVIVVGT 223 >UniRef50_A4J147 Indole-3-glycerol phosphate synthase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=TRPC_DESRM Length = 265 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 57/221 (25%), Gaps = 36/221 (16%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 LA Y GA L G+ +++ + + +P I + Sbjct: 74 LAHIYQSNGAAALSVLTDENFFLGK---LTYLEEIKQQSSLPLLRKDFILDPVQLYQSRL 130 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 GAD + + + L L + + Sbjct: 131 AGADAVLLIAGLLTPGELSQLFLLCREIGMQALVEVHTQ--------------------- 169 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC---HVPLIASGGAG 211 + +Q V A I +N + +L K+ E + +++ G Sbjct: 170 ------EELQRVLTTDAKLIGINNRDLSTF--QTNLATTAKLLEQVQIEDITIVSESGIA 221 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 E + + V G L +++ + G Sbjct: 222 QKEDI-KFLKSLGVHGVLVGEALVTAQDIAKKVQEIVVAGG 261 >UniRef50_A6L5H1 Dihydroorotate dehydrogenase n=7 Tax=Bacteroidales RepID=PYRD_BACV8 Length = 303 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 21/116 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVS 67 + DI +A+ GAD + + IT G + + V Sbjct: 170 VTDITEIARAAEASGADSVSLINTLLGMAVDAEKRRPVLSTITGGMSGAAVKPIALRMVW 229 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 +VA+ ++IP GGI +DA + + GA I I + DP + ++++ Sbjct: 230 QVAKAVNIPVIGLGGIMGWKDAVEFMLAGATAIQIGTANFIDPAITVKVSEGINDY 285 Score = 41.4 bits (96), Expect = 0.027, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 27/100 (27%), Gaps = 5/100 (5%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 L + +KR + L + +V + ++P+I GG + + Sbjct: 193 TLLGMAVDAEKRRPVLSTITGGMSGAAVKPIALRMVWQVAKAVNIPVIGLGGIMGWKDAV 252 Query: 218 EAFRDADVDGALAASVFHKQIINI----GELKAYLATQGV 253 E A + + YL G Sbjct: 253 EFM-LAGATAIQIGTANFIDPAITVKVSEGINDYLERHGY 291 >UniRef50_Q0W6C2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=2 Tax=Euryarchaeota RepID=Q0W6C2_UNCMA Length = 229 Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 61/195 (31%), Gaps = 24/195 (12%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 + + + E D+ G S +S ++ + V GI Sbjct: 34 RLVTTSAPLEVIRTMR---PKETYIADLDR-ITGAGDHLSTISDISAISST--MVDAGIS 87 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 EDAA++ +D I + + L + + ++V +D + Sbjct: 88 REEDAARLRKV-SDSIIMGTET-----ASLSLIEALQARDVLVSVDMRHGQMMAADP--- 138 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 + V+ + + G I+L + + G G DL L + P+ Sbjct: 139 ---------ALPESPMMVVRRLNELDLGGIILLDIARVGSGEGIDLGLLSDAASISRHPV 189 Query: 205 IASGGAGTMEHFLEA 219 I GG ++ + Sbjct: 190 IVGGGVRDVQDLEQM 204 >UniRef50_A5N0D9 Predicted enoate reductase n=2 Tax=Clostridium kluyveri RepID=A5N0D9_CLOK5 Length = 704 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 10/101 (9%) Query: 29 IGDIVPLAKRYAEEGADELVF--------YDITASSDGRVVDKSWV-SRVAEVIDIPFCV 79 + D V +AK GAD + + IT + + ++ V + + IP Sbjct: 289 LNDGVEIAKSLEAYGADAINVTTGNSDTQFMITEPISFQPGWRKYLSKAVKDAVHIPVIS 348 Query: 80 AGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADR 119 G I++ E A ++L G D I + P LADP + + Sbjct: 349 VGVIRTPEQAEQLLLEGDQDFIGLARPLLADPDWAVKAKNG 389 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 50/189 (26%), Gaps = 28/189 (14%) Query: 86 LEDAAKILSFGADKISI--NSPALADPTLI-------TRLADRFGVQCIVVGIDTWYDAE 136 ++ A + GAD + + L + L F + ++ Sbjct: 200 IKAAKRAQQSGADGVELHAGHGYLLNQFLSPYTNIRSDEYGGSFENRLRIMKELIEGIHR 259 Query: 137 TGKYHVNQYTGDESRTRVTQWET----------LDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + + ++ + ++ GA I + N D Sbjct: 260 ECSADFPISVRLTVDEFYEKIDYPEQGLHLNDGVEIAKSLEAYGADAINVTTGNSDTQFM 319 Query: 187 -------GYDLEQL--KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + K V++ H+P+I+ G T E + + D D A Sbjct: 320 ITEPISFQPGWRKYLSKAVKDAVHIPVISVGVIRTPEQAEQLLLEGDQDFIGLARPLLAD 379 Query: 238 IINIGELKA 246 + K Sbjct: 380 PDWAVKAKN 388 >UniRef50_C8NN95 Dioxygenase n=4 Tax=Corynebacterium RepID=C8NN95_COREF Length = 338 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 48/161 (29%), Gaps = 11/161 (6%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 +++ A +L+ + + P + L A++F + Sbjct: 75 DVDEVAGLLTQAFREYRLGEPVVPAVDLTNGWAEKFHLAVAARPAVISSTFGMFTPDEFA 134 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN------GYDL----EQLK 194 + + ++ GA +V+ G R+ D E L+ Sbjct: 135 TLKQAGIEAWVTVTNENDARTAERAGADVLVVQGPEAGGHRSTWSLTEEPDRRSLDELLR 194 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 V +P++A+GG T E D SVF Sbjct: 195 AVVGQVRIPVVAAGGVSTREGVQRML-DLGASAVACGSVFL 234 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 40/141 (28%), Gaps = 41/141 (29%) Query: 6 IIPCLDVRDGQ-------------VVKGVQFRNHEIIGDIVPL--------------AKR 38 ++P +D+ +G V+ + A+ Sbjct: 96 VVPAVDLTNGWAEKFHLAVAARPAVISSTFGMFTPDEFATLKQAGIEAWVTVTNENDART 155 Query: 39 YAEEGADELVFYDITASSDGRVVDK------------SWVSRVAEVIDIPFCVAGGIKSL 86 GAD LV A G + V + IP AGG+ + Sbjct: 156 AERAGADVLVVQGPEA--GGHRSTWSLTEEPDRRSLDELLRAVVGQVRIPVVAAGGVSTR 213 Query: 87 EDAAKILSFGADKISINSPAL 107 E ++L GA ++ S L Sbjct: 214 EGVQRMLDLGASAVACGSVFL 234 >UniRef50_Q5HJT5 Probable tRNA-dihydrouridine synthase n=92 Tax=Firmicutes RepID=DUS_STAAC Length = 328 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 16/159 (10%), Positives = 50/159 (31%), Gaps = 12/159 (7%) Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + G I +N + +A + +++ D + ++R Sbjct: 91 LAKMGFKGIDLNMGCP-----VANVAKKGKGSGLILRPDVAAEIIQATKAGGLPVSVKTR 145 Query: 152 TRVTQWETL-DWVQEVQKRGAGEIVLNMMNQ-DGVRNGYDLEQLKKVRE-----VCHVPL 204 + + DW++ V ++ + +++ + + + E ++ ++ + L Sbjct: 146 LGYYEIDEWKDWLKHVFEQDIANLSIHLRTRKEMSKVDAHWELIEAIKNLRDEIAPNTLL 205 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +G + LE +DG + + Sbjct: 206 TINGDIPDRKTGLELAEKYGIDGVMIGRGIFHNPFAFEK 244 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 26/105 (24%), Gaps = 9/105 (8%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAE----- 71 VK K E+ L + T + + + Sbjct: 142 VKTRLGYYEIDEWK--DWLKHVFEQDIANLSIHLRTRKEMSKVDAHWELIEAIKNLRDEI 199 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 + + G I + ++ +G D + I +P + Sbjct: 200 APNTLLTINGDIPDRKTGLELAEKYGIDGVMIGRGIFHNPFAFEK 244 >UniRef50_C5EVU6 NADH:flavin oxidoreductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVU6_9FIRM Length = 625 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 70/215 (32%), Gaps = 24/215 (11%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-----------DKSWVSRVAEV 72 + + +A+ GAD + + + + + + Sbjct: 208 EGGRTVQETGEIARILEAAGADAIHVS--IGMPESGGYISATMDVEDCFNVENAAVIKKY 265 Query: 73 IDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + IP I ++DA +++ G AD +S+ LADP L+ + G+ V Sbjct: 266 VSIPVIAVNRIVDIKDAVEVVEQGKADMVSMARAQLADPELVNK---YLGINDEPVYRCI 322 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 + + + + E + +V ++ +I++ G+ +L Sbjct: 323 GCNQGCKDKKARKKITCMQNPLLGREELIHFVPATKEEQQEKILIAGAGPAGLELACNLA 382 Query: 192 ---QLKKVREVCHVPLIASGGAGTMEHFLEAFRDA 223 + ++ E +P GG + ++ Sbjct: 383 RRGLVPEIYEKDQIP----GGLVNLSALAPCKKNM 413 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 55/200 (27%), Gaps = 26/200 (13%) Query: 79 VAGGIKSLED-AAKILSFGADKISINSP-----ALADPTLITRLADRFG--------VQC 124 + G I S A + G D + I+ AL D +G Sbjct: 122 LDGLIASYAACALRCKKAGVDGVDIHGAHAHEIALFMSEFYNDRTDGYGGSIEGRALFPA 181 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN-MMNQDG 183 ++ + T ET + + ++ GA I ++ M + G Sbjct: 182 QIIKAIKSACGSGFPVVFRISGTEMVEGGRTVQETGEIARILEAAGADAIHVSIGMPESG 241 Query: 184 VRNGY--------DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++E +++ +P+IA ++ +E D A Sbjct: 242 GYISATMDVEDCFNVENAAVIKKYVSIPVIAVNRIVDIKDAVEVVEQGKADMVSMARAQL 301 Query: 236 KQIINIGELKAYLATQGVEI 255 + YL + Sbjct: 302 ADPELVN---KYLGINDEPV 318 >UniRef50_B9SRY4 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9SRY4_RICCO Length = 272 Score = 62.6 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 65/268 (24%), Gaps = 65/268 (24%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGD---------------IVPLAKRYAEEGADEL 47 A R PC+D+ G+ VK + + A Y E+G Sbjct: 46 AVRFRPCIDIHKGK-VKQIVGSTLRDSKEEDGSILVTNFVSDKSAAEFANLYEEDGLLGG 104 Query: 48 VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 + A + + V GGI ++++ + GA + + S Sbjct: 105 HVIMLGADPLSKAAAFEAL----HAYPGGLQVGGGI-NVDNCLSYVEEGASHVIVTSYVF 159 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + ++ + + + Sbjct: 160 NNGQMDLERLKDLVH---------------------VVGKQRLVLDLSCRKKAEKISN-- 196 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD--V 225 R G D E + + +P+ +GG M V Sbjct: 197 ----------------TRLGIDEELVALLGMHSPIPVTYAGGVTVMNDLERIKTAGKGRV 240 Query: 226 DGALAASVF--HKQIINIGELKAYLATQ 251 D S + ++ A+ Q Sbjct: 241 D-VTVGSALDIFGGSLLYRDVVAWHKEQ 267 >UniRef50_D0MHI1 Indole-3-glycerol-phosphate synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHI1_RHOM4 Length = 273 Score = 62.2 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 66/223 (29%), Gaps = 36/223 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 ++ LA++Y GA + +T + + +D+P I Sbjct: 70 NVPELARQYKWHGAQAISV--LTEPDYFQGS-LEHLEAARRTVDLPLLRKDFILDPYQIV 126 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + ++GAD + + + L L A + Sbjct: 127 EARAYGADAVLLIAALLDPVQLHELHAMA---------------------TELGLSCLVE 165 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL--IASG 208 ++ + LD +++ G N+D D+ + +V + +A Sbjct: 166 VHSESELDRLDL-DKIEILGVN-------NRDLHTFEVDVNRAVQVLRHVPERIVRVAES 217 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 G T + + R +D L F + GE L + Sbjct: 218 GLRTADELV-HLRRHGIDAVLIGEAFMRAPH-PGEALERLRRE 258 >UniRef50_Q0W625 Indole-3-glycerol phosphate synthase n=2 Tax=Euryarchaeota RepID=Q0W625_UNCMA Length = 255 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 39/212 (18%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 +GD +AK YA GA + G + + + + +P + L Sbjct: 68 RTVGDPAEIAKEYAGAGACGVSVLTEPKYFGGSLANLQSAAGI----SVPVLRKDFLFDL 123 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLA--DRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + +GAD + + S + +L +A R+G++ +V D Sbjct: 124 SQVKESYYYGADTLLLISSFFSADSLAAMIAECRRYGMEPLVEVHDR------------- 170 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 D V+ GA +N ++ DL + + + + Sbjct: 171 ----------------DDVERSASAGATLYAVNNRDR--HTLKVDLRRTRDLAPAIDGTV 212 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 +++ G T++ + D AL + + Sbjct: 213 VSASGVSTVDQLKFVLSYS--DAALVGTALMR 242 >UniRef50_A1X3A1 Putative NADH:flavin oxidoreductase n=2 Tax=Anaerostipes caccae RepID=A1X3A1_9FIRM Length = 357 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 48/154 (31%), Gaps = 25/154 (16%) Query: 3 AKRIIPCLDVRDGQ--------VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-- 52 R+ LD+ +G ++ + + +A + + G D L Sbjct: 191 RMRV--VLDIMEGIRHSCGENFLISVRLGFDEPDLESSAFMAGTFEKAGMDFLHVSTGFG 248 Query: 53 ------TASSDGRVVDKSW-VS-----RVAEVIDIPFCVAGGIKSLEDAAKILSFGA-DK 99 + + + + + ++ + + P GGI+ ++ +L D Sbjct: 249 STGFMDERTMENPPDEFPFNIRIWGAMQMKQRVSCPVIAVGGIRQVQQGMFLLEQECADF 308 Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 +++ L DP + ++ + + Sbjct: 309 VALGRALLCDPEWVIKIKQGREIVSCRNCRKCLW 342 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 22/183 (12%), Positives = 51/183 (27%), Gaps = 22/183 (12%) Query: 86 LEDAAKILSFGADKISINSP------ALADPTLITRLADRFGVQ--CIVVGIDTWYDAET 137 +E A + + G D + ++ A PT+ R G + V +D Sbjct: 145 IEAAVRARAAGYDGVELHCAHSYFLNAFLSPTVNHRTDRFGGNIEGRMRVVLDIMEGIRH 204 Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL-NMMNQDGVRNGYDLEQ---- 192 + + +K G + + G + +E Sbjct: 205 SCGENFLISVRLGFDEPDLESSAFMAGTFEKAGMDFLHVSTGFGSTGFMDERTMENPPDE 264 Query: 193 ----LK-----KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 ++ ++++ P+IA GG ++ + D + + Sbjct: 265 FPFNIRIWGAMQMKQRVSCPVIAVGGIRQVQQGMFLLEQECADFVALGRALLCDPEWVIK 324 Query: 244 LKA 246 +K Sbjct: 325 IKQ 327 >UniRef50_C0D969 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D969_9CLOT Length = 634 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 57/181 (31%), Gaps = 17/181 (9%) Query: 17 VVKGVQFR----NHEIIGDIVPLAKRYAEEGADELVF---YDITASSDGRVV------DK 63 VV + + + + + K E G D + + + + Sbjct: 199 VVFRISGDEMVERGRKLPETIEIIKLLEEAGIDAVHVSIGMPESEEYMCAPMDIPDGFNT 258 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGV 122 S V + IP G I ++E A +IL G AD +I LADP L+ + G Sbjct: 259 SAAEAVKREVKIPVITVGRITTMEQAEEILEQGKADLTAIGRAQLADPGLVNK---YMGG 315 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 V + V + R+ + L + A ++V+ Sbjct: 316 DPAPVRRCIGCNQGCRAATVRKKIRCMQNVRIGNEKALTFAPPSPALEAKKVVIVGAGPA 375 Query: 183 G 183 G Sbjct: 376 G 376 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 57/195 (29%), Gaps = 29/195 (14%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG------- 138 +A + G D + I+ + ++ R+ + G D A Sbjct: 132 AREARRCQLSGVDGVEIHGA--HAHEIAQFMSPRYNRRADEYGGDYRGRARYSLEIVRAI 189 Query: 139 ---KYHVNQYTGDESRTRVTQW-----ETLDWVQEVQKRGAGEIVL---NMMNQDGVRN- 186 S + + ET++ ++ +++ G + + +++ + Sbjct: 190 KAICGTEYPVVFRISGDEMVERGRKLPETIEIIKLLEEAGIDAVHVSIGMPESEEYMCAP 249 Query: 187 -----GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G++ + V+ +P+I G TME E D + Sbjct: 250 MDIPDGFNTSAAEAVKREVKIPVITVGRITTMEQAEEILEQGKADLTAIGRAQLADPGLV 309 Query: 242 GELKAYLATQGVEIR 256 Y+ +R Sbjct: 310 N---KYMGGDPAPVR 321 >UniRef50_Q1ISJ1 Indole-3-glycerol phosphate synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=TRPC_ACIBL Length = 260 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 60/208 (28%), Gaps = 35/208 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D++ LAK E GA L G + + R ++ + IP I Sbjct: 73 DVIALAKELEEAGAAALSVLTDVPHFQGSLENLE---RASQTVRIPCLRKDFILDPAQIV 129 Query: 91 KILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + ++GAD I + AL D L A R+G+ + D + + Sbjct: 130 EARAYGADAILLIVAALTDLDLRNLRDEAKRYGLDVLCEVHDRDELKRAADLGFDLIGVN 189 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 + + + + ++ ++ + + A Sbjct: 190 NRNLKTFRVDIENSLRFAEEFPPNALRV-----------------------------AES 220 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHK 236 G + E RDA L + Sbjct: 221 GIHSREDIDR-LRDAAYSAFLIGESLMR 247 >UniRef50_B0GA01 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0GA01_9FIRM Length = 338 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 49/159 (30%), Gaps = 5/159 (3%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 K+ +G +++++N + + F G+D + D K V Sbjct: 77 VEKLKVYGYEEVNLNLGCPSKTVVSKGRGSGFLADP--DGLDRFLDEIFKKCDVKISIKT 134 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIAS 207 E + + E++++ Q +L E +PL + Sbjct: 135 RIGKDD-PEEFARLLDIYNQYPVEELIIHPRVQKDFYKNQPNLGAFHDAVEESKIPLCYN 193 Query: 208 GGAGTMEHFLEAFRD-ADVDGALAASVFHKQIINIGELK 245 G T E + E R+ VD + + ++ Sbjct: 194 GDIFTPESYEEMKREFPQVDTFMLGRGILMNPALLDLIR 232 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 48/169 (28%), Gaps = 14/169 (8%) Query: 11 DVRDGQVVKGVQFRNHEIIGDIVPLAK---RYAEEGADELVFYDIT-ASSDGRVVDKSWV 66 DV+ +K ++ D A+ Y + +EL+ + + Sbjct: 127 DVK--ISIKTRIGKD-----DPEEFARLLDIYNQYPVEELIIHPRVQKDFYKNQPNLGAF 179 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQC 124 E IP C G I + E ++ D + L +P L+ + R Sbjct: 180 HDAVEESKIPLCYNGDIFTPESYEEMKREFPQVDTFMLGRGILMNPALLDLIRMR-EKTD 238 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + D + + + + + + G GE Sbjct: 239 VKKTTDIDVTEWKKEETSRKMQSADRYKKEIHAFLEQIKCDYLEVGMGE 287 >UniRef50_A9BH24 Putative N-acetylmannosamine-6-phosphate epimerase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH24_PETMO Length = 502 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 24/199 (12%), Positives = 59/199 (29%), Gaps = 37/199 (18%) Query: 64 SWVSRVAEVIDIPFCV--------AGGIKS-LEDAAKILSFGADKISINSPALADPTLIT 114 + + +++++P I + +D ++ +D I+I+ P + Sbjct: 48 ENIREIKKIVNLPVIGITKNRSLKGAFITTTKKDIDNLVDADSDFIAIDCTRRERPEPLP 107 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 L + ++ V+ V I Sbjct: 108 EL------------------------FDYLRKYYPHIGIIADIADIEDVKYVLPLKPDYI 143 Query: 175 VLNMMNQDGVRNG---YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 + +G DL+ ++K ++ ++P+IA G T ++ +A Sbjct: 144 ATTLAGYTDYTSGRDLPDLDLIEKTVKITNIPVIAEGNISTPQYARQAILY-GAYAVTVG 202 Query: 232 SVFHKQIINIGELKAYLAT 250 S + + K +L Sbjct: 203 SAITRPHVIAKNFKDHLKD 221 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 24/64 (37%) Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + + ++ +IP G I + + A + + +GA +++ S + D Sbjct: 160 PDLDLIEKTVKITNIPVIAEGNISTPQYARQAILYGAYAVTVGSAITRPHVIAKNFKDHL 219 Query: 121 GVQC 124 Sbjct: 220 KDFR 223 >UniRef50_D2LTR9 Indole-3-glycerol-phosphate synthase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LTR9_BACS4 Length = 263 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 63/211 (29%), Gaps = 34/211 (16%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 V +A+ Y + D + G S++ V E +P I Sbjct: 62 VDQFSPVDIAREYDKINIDAISVLTDERFFQG---HDSYLMAVKECTSVPVLRKEFIVDE 118 Query: 87 EDAAKILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + + + GAD I + + L + +A+ + ++ D + + Sbjct: 119 KQIYESKAIGADAILLIAAILDKQQIKEYMAIAEELDLDVLMEVHDEAEIEKVLSTAKPK 178 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 G +R T TL+ + + K + + V L Sbjct: 179 MIGVNNRNLKTFETTLETTKLLAKY--------------------------ISD--DVTL 210 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFH 235 I+ G + + + + V+G L F Sbjct: 211 ISESGIKSSKDV-QFLSNLGVNGLLVGEAFM 240 >UniRef50_Q0JEG3 Os04g0278900 protein n=3 Tax=Oryza sativa RepID=Q0JEG3_ORYSJ Length = 368 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 23/186 (12%), Positives = 49/186 (26%), Gaps = 17/186 (9%) Query: 70 AEVIDIPFCVAG-GIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVV 127 AE I + G + +L A ++ + D+I++N + + Sbjct: 47 AEQHPIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGHGCFGARLMFDPEF 106 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRV--TQWETLDWVQEVQ-KRGAGEIVLNMMNQDGV 184 D V + E ++V +V K +++ Sbjct: 107 VGDAMSAIAANCN-VPVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLS 165 Query: 185 RNGYD---------LEQL-KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 E +R+ V +GG T++ + R + Sbjct: 166 GLSPAENRNVPPLKYEYYFALLRDFPDVQFTLNGGITTIDQVTASIRQ-GAHRVMVGRAA 224 Query: 235 HKQIIN 240 + N Sbjct: 225 YNNPWN 230 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 35/106 (33%), Gaps = 12/106 (11%) Query: 18 VKGVQFRNHEII-GDIVPLA-KRYAEEGADELVFYDITASSDG----RVVDKSWVS---- 67 VK + ++ K ++ + + A G + + Sbjct: 124 VKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLSGLSPAENRNVPPLKYEYY 183 Query: 68 --RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + D+ F + GGI +++ + GA ++ + A +P Sbjct: 184 FALLRDFPDVQFTLNGGITTIDQVTASIRQGAHRVMVGRAAYNNPW 229 >UniRef50_UPI0000586CAD PREDICTED: similar to Dus1l protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000586CAD Length = 291 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 16/46 (34%) Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +P+ A+G +++ + VDG + A Sbjct: 2 KAAVKIPVFANGNIQSLQDVHRCMEETGVDGVMTAEGNLHNPALFE 47 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 2/115 (1%) Query: 69 VAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVV 127 + + IP G I+SL+D + + G D + L +P L + Sbjct: 1 MKAAVKIPVFANGNIQSLQDVHRCMEETGVDGVMTAEGNLHNPALFEGTHPKVWDITDEY 60 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG-AGEIVLNMMNQ 181 + + + + + G EI + + Sbjct: 61 IDLVKTYPTPLSAVRAHLFKILHHSLMVHIDLRIDLARAKSIGDCEEICKTLRGR 115 >UniRef50_A8BQT4 tRNA dihydrouridine synthase, putative n=2 Tax=Giardia intestinalis RepID=A8BQT4_GIALA Length = 462 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 50/160 (31%), Gaps = 14/160 (8%) Query: 92 ILSFGA----DKISINSPALADPTLITRL-ADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 ++ GA D + +N L + A G + I A T + + Sbjct: 97 LVQMGAGCCFDVVELNMGCPQAVALRGKYGAYLMGHLDLAEEILRTLVAVTARSGLGHKV 156 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG----YDLEQLKKV-----R 197 ++R ++ +T+ + G L+ + D + L + Sbjct: 157 AVKTRLDISDKDTVKMCLRLCSTGIAMFTLHGRTRLQRTGSAVGLPDWQALASILNNLRA 216 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 H+ A+GG +E G ++AS+ + Sbjct: 217 SYPHLIFFANGGVWNLETHEHLRSLTGCHGTMSASMLTEN 256 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 41/167 (24%), Gaps = 16/167 (9%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV----DKSWVS 67 + VK D V + R G + T D ++ Sbjct: 152 LGHKVAVKTRL---DISDKDTVKMCLRLCSTGIAMFTLHGRTRLQRTGSAVGLPDWQALA 208 Query: 68 RVAEVI-----DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFG 121 + + + F GG+ +LE + S G S + + R G Sbjct: 209 SILNNLRASYPHLIFFANGGVWNLETHEHLRSLTGCHGTMSASMLTENAGVYN---CRDG 265 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + I A + Q + + + + + Sbjct: 266 LNKESPTITNLTCAIGEHWTDQQKVQKRLAMDQSLRKCVYVASKAVQ 312 >UniRef50_B0TE53 Biotin synthase n=2 Tax=Clostridia RepID=BIOB_HELMI Length = 326 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 70/252 (27%), Gaps = 23/252 (9%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY--DITASSDGRVVDKSWVSRVAEVID 74 VK + IV A+ EGA S + R+ Sbjct: 82 CVKTY---DLLDPDAIVGRARVMEAEGAHRFSLVTSGRGMSDAELEPVLAIYERLRRETK 138 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + C + GI + ++ G N A ++ + I Sbjct: 139 LSLCASLGILNEAQLRRLAEAGVTMYHHNLEASRR--FFPQICTTHSYDERIATIRAAQA 196 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI---VLNMMNQDGVRNGYDLE 191 A G + T + +D E+++ G + +LN + + + Sbjct: 197 A--GMVVCSGGIFSMG---ETIDDRIDMAFELRELGIRSVPINILNPIAGTPLEGQPLIP 251 Query: 192 QLKKVREVCHVPLI--------ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 L+ ++ + LI A G G + A D AL S + E Sbjct: 252 PLEILKSIALYRLILPSARIRMAGGREGALRDLQSLPFIAGADAALVGSYLTTSGRTVAE 311 Query: 244 LKAYLATQGVEI 255 L G+ + Sbjct: 312 DIQMLRDLGLNV 323 >UniRef50_A5G9T5 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=Deltaproteobacteria RepID=A5G9T5_GEOUR Length = 374 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 14/132 (10%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITAS-------------SDGRVVDKSWVSRVAEVIDI 75 + D + A+ EEG D + T + + + R+ + + Sbjct: 231 LDDAITAARALDEEGIDAIEVSGGTPASGDRTPVRQGIDSREQEAYNLPLAYRIKQAVSC 290 Query: 76 PFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P V GG++S E I+ AD +++ P + +P L R A + + + Sbjct: 291 PVMVVGGLRSFEIVEGIIRREEADYVAMARPFIREPALAKRWAGGDESHARCISCNGCFK 350 Query: 135 AETGKYHVNQYT 146 + Sbjct: 351 PGLKSGGIYCVV 362 >UniRef50_O27281 Dihydroorotate dehydrogenase n=20 Tax=Euryarchaeota RepID=PYRD_METTH Length = 303 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 23/121 (19%) Query: 29 IGDIVPLAKRYAEEGADELVFYD----------------ITASSDG------RVVDKSWV 66 + DIV +A E G+D L + ++ + G + V V Sbjct: 168 VTDIVEIAGSAEEAGSDALTLINSLGPGMKIDIKTARPILSNAFGGMSGPAIKPVAVRCV 227 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD-PTLITRLADRFGVQCI 125 V +DIP GG++ +DA + L GA + + + + D P + ++ + Sbjct: 228 YDVYRSVDIPIMGVGGVRDFQDAVEFLFAGARAVQVGTAIMYDGPEVFMKICRGLEAFMM 287 Query: 126 V 126 Sbjct: 288 A 288 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 25/219 (11%), Positives = 55/219 (25%), Gaps = 38/219 (17%) Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLED---AAKILSFGADKISINSPALADPTLIT 114 G + + V E + P + S E+ AA + AD I +N Sbjct: 78 GVEAFREELKLVDEEV--PLIASVYGASPEEFASAAASVEEYADMIELNVSCPHAMA--- 132 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 G + ++ + ++ ++ G+ + Sbjct: 133 ------GCGASIGQDPELTFRVVSAVKDAVDVPISTKLTPNVTDIVEIAGSAEEAGSDAL 186 Query: 175 VL-------------NMM----NQDGVRNGYDLEQLK-----KVREVCHVPLIASGGAGT 212 L N G +G ++ + V +P++ GG Sbjct: 187 TLINSLGPGMKIDIKTARPILSNAFGGMSGPAIKPVAVRCVYDVYRSVDIPIMGVGGVRD 246 Query: 213 MEHFLEAFRDADVDGALAASVF-HKQIINIGELKAYLAT 250 + +E A + + ++ L Sbjct: 247 FQDAVEFL-FAGARAVQVGTAIMYDGPEVFMKICRGLEA 284 >UniRef50_C3N6C8 Pyridoxal biosynthesis lyase pdxS n=28 Tax=cellular organisms RepID=PDXS_SULIA Length = 338 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 63/232 (27%), Gaps = 17/232 (7%) Query: 33 VPLAKRYAEEGADELVFYD------ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 V A+ E GA ++ D + R+ D + V I IP I Sbjct: 70 VQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHY 129 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 +A + + G D I + F + E + + Sbjct: 130 YEAKLLEALGVDMIDESEVLTPADEEHHINKWEFS---VPFVNGARNLGEALRRTAEGAS 186 Query: 147 GDESRTRVTQWETLDWVQEVQ--KRGAGEIVLN---MMNQDGVRNGYDLEQLKKVREVCH 201 ++ + V+ ++ ++ + + ++ ++ Sbjct: 187 MIRTKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPYQLVELTAKIKR 246 Query: 202 VPLI--ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +P++ A+GG T DG S K KA + Sbjct: 247 LPIVNFAAGGIATPADA-ALMMWLGADGLFVGSGIFKSQDPDERAKAVVLAA 297 >UniRef50_A5FJK8 Geranylgeranylglyceryl phosphate synthase n=7 Tax=Bacteroidetes RepID=A5FJK8_FLAJ1 Length = 243 Score = 61.8 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + A+ G+ + + + + V +S +++ ++IP V GGI L K Sbjct: 162 ALATAQAGEMLGSKLIYLEAGSGAK--KPVPLEMISVISQNVEIPIIVGGGIVDLHGIKK 219 Query: 92 ILSFGADKISINSPALADPTLIT 114 + GAD + I + D Sbjct: 220 AYNAGADLVVIGTAFENDSHFFD 242 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 52/176 (29%), Gaps = 13/176 (7%) Query: 64 SWVSRVAEVIDIPF-CVAGG---IKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 ++++ + +P G I DA LS + A Sbjct: 67 DLIAQLKQKTRLPVVIFPGDPSQISPKADAILFLSL-----LSGRNPDYLIEYQVQAAPI 121 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYT-GDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + V + E+G E R L Q + G+ I L Sbjct: 122 LKKTNLEVISTGYILIESGNETAVARVSKTEPLNRENFDLALATAQAGEMLGSKLIYLE- 180 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 G + LE + + + +P+I GG + +A +A D + + F Sbjct: 181 -AGSGAKKPVPLEMISVISQNVEIPIIVGGGIVDLHGIKKA-YNAGADLVVIGTAF 234 >UniRef50_C2KZB3 Indole-3-glycerol-phosphate synthase n=1 Tax=Oribacterium sinus F0268 RepID=C2KZB3_9FIRM Length = 284 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 69/225 (30%), Gaps = 44/225 (19%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + +AK Y G D + +T D ++ +A + +P + + Sbjct: 96 LQIAKDYEAAGIDAIS--CLTEPKYFLGKD-QYLQEIAHAVSVPVLRKDFLIDPYQIYQA 152 Query: 93 LSFGADKISINSPALADPTLITR--LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 GA I + L + L +A + G+ +V D Sbjct: 153 KLLGAKAILLIVSLLGERELKEFLSIAGKLGLDALVECHD-------------------- 192 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE---QLKKVREVCHVPLIAS 207 + ++ GA I +N N ++E L+ + + + A Sbjct: 193 ---------EEEIRCALSVGAEIIGVNNRNLKTFS--VNMENSLSLRNLVPKGQLFV-AE 240 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHK---QIINIGELKAYLA 249 G E +A VDG L + + + EL++ L Sbjct: 241 SGMSKPEEL-RLLEEAGVDGVLIGESLMRAESKKEKLQELRSLLK 284 >UniRef50_A7AWB5 Dihydrouridine synthase (Dus) domain containing protein n=1 Tax=Babesia bovis RepID=A7AWB5_BABBO Length = 362 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 55/183 (30%), Gaps = 16/183 (8%) Query: 70 AEVIDIPFCVAGG-IKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 A I + G + SL A L +G + ++N + + + + Sbjct: 70 ANEHPIVLQLGGNNLDSLSKAGNIALGYGYTEFNLNVGCPSTR-VSGKGCFGAALMNDAP 128 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTR--VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + + + D++ V +G + +++ Sbjct: 129 LVGRIVKHLRSELGTPVTVKHRLGVDHNDSYEFVRDFISTVADQGCTDFIVHARKAWLNG 188 Query: 186 NGY---------DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 D E++ ++ E ++ + +GG ++E A V G + + + Sbjct: 189 INPRKNRSIPPLDHERVYRLCQEFPNLNISINGGIKSLEEIKYALSR-GVYGVMVGRMAY 247 Query: 236 KQI 238 + Sbjct: 248 ENP 250 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 11/105 (10%) Query: 18 VKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVS 67 VK +H + V A++G + + + A +G +D V Sbjct: 147 VKHRLGVDHNDSYEFVRDFISTVADQGCTDFIVHARKAWLNGINPRKNRSIPPLDHERVY 206 Query: 68 RVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 R+ + + + GGIKSLE+ LS G + + A +P Sbjct: 207 RLCQEFPNLNISINGGIKSLEEIKYALSRGVYGVMVGRMAYENPC 251 >UniRef50_A5EVG3 Indole-3-glycerol phosphate synthase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=TRPC_DICNV Length = 267 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 63/219 (28%), Gaps = 36/219 (16%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 LA+ + GA L + T G D +++S V + + +P I S + Sbjct: 77 PELLAQECVQYGASCLSVFTDTHFFYG---DVAYLSAVKKAVPVPVLRKDFIISRYQILE 133 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 G D I + L D L + + V+ Sbjct: 134 SRLLGVDCILLIVAILTDEQLQEFVVLAHDLGMDVLIEIHD------------------- 174 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASGG 209 + ++ + +N N + LE+ ++R+ +I+ G Sbjct: 175 --------ENDLKRALNVPVRTLAINNRNPEDFN--ASLEKSAQLRQQLPKDYFVISESG 224 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 T + + +D L GE +L Sbjct: 225 INTHADVVYLL-NCGLDAVLIGGALMSAEFA-GEALHHL 261 >UniRef50_A9KRF8 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=Clostridiales RepID=A9KRF8_CLOPH Length = 354 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 37/127 (29%), Gaps = 15/127 (11%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-----VVDKS------WVSR 68 + D + A+ + E G D L DI+ D + Sbjct: 213 MRLGGFEPTLEDAIAYARIFEESGVDFL---DISYGFVQESTPVVPKDYPFKDIIYAAQK 269 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVV 127 + E + IP GI S E A KIL D + I L + + V + Sbjct: 270 IKEAVSIPVFAVNGINSPELADKILEQTKVDMVDIGRGTLVNYNWANDAKEGRDVGTCLY 329 Query: 128 GIDTWYD 134 + Sbjct: 330 CKTCMWR 336 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 18/172 (10%), Positives = 50/172 (29%), Gaps = 13/172 (7%) Query: 88 DAAKILSFGADKISINSPALADPT-----LITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + G D + I++ + + R DR+G + + ++ + Sbjct: 149 AVRRAYLAGYDGVEIHACHSYLISQFLNRRVNRRDDRYGQKPELFALEIIREIRKQTPSD 208 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEI-----VLNMMNQDGVRNGYDLEQL---K 194 T + + + + ++ G + + ++ + + + Sbjct: 209 FIIGMRLGGFEPTLEDAIAYARIFEESGVDFLDISYGFVQESTPVVPKDYPFKDIIYAAQ 268 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 K++E +P+ A G + E + VD + K Sbjct: 269 KIKEAVSIPVFAVNGINSPELADKILEQTKVDMVDIGRGTLVNYNWANDAKE 320 >UniRef50_Q6AJ40 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ40_DESPS Length = 318 Score = 61.4 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 50/208 (24%), Gaps = 54/208 (25%) Query: 45 DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI-- 102 D + A + ++ + G + Sbjct: 76 DFIALAGRLAELGYKEINW------------------------------NLGCPAPMVAK 105 Query: 103 ---NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 S LA P LI + Q V + Sbjct: 106 KKRGSGMLAHPDLIVEFLEEVLPQIPVKLSIKTRLGYSNTAQTK---------------- 149 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + + + + EI+++ + G D + + ++ + +G T+EHF E Sbjct: 150 -ELLPRLDQFPLTEIIIHARLGKQMYKGTTDPDTFAECLQLSQHRIAYNGDITTLEHFHE 208 Query: 219 AF-RDADVDGALAASVFHKQIINIGELK 245 R V+ + +K Sbjct: 209 LQTRFPQVEHWMIGRGALADPFLAERIK 236 >UniRef50_Q6MM64 Inosine-5-monophosphate dehydrogenase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MM64_BDEBA Length = 346 Score = 61.0 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 57/174 (32%), Gaps = 16/174 (9%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 A ++ G K+ S + + TR ++ ID + ++ Sbjct: 86 AAQARRLKENGV-KVISGSVGVGE-EFKTRAKALVEAGVNIITIDIAHGHSVQMMETMKW 143 Query: 146 TGDES---RTRVTQWETLDWVQEVQKRGAGEI--------VLNMM--NQDGVRNGYDLEQ 192 D+ T D +++ + GA I + GV + Sbjct: 144 LKDQYPQVDLIAGNLATPDAARDLIEAGADAIKVGIGPGSMCTTRIITGCGVPQLTAIGL 203 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 ++ E VP+IA GG T ++AF A + S+ I GE+K Sbjct: 204 CAEIGESYGVPVIADGGIRTSGDMVKAF-AAGASTVMLGSMLSGTIETPGEIKN 256 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 43/153 (28%), Gaps = 21/153 (13%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIV-----------PLAKRYAEEGADELVF------ 49 I +D+ G V+ ++ A+ E GAD + Sbjct: 124 IITIDIAHGHSVQMMETMKWLKDQYPQVDLIAGNLATPDAARDLIEAGADAIKVGIGPGS 183 Query: 50 YDITASSDGRVV-DKSWV---SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 T G V + + + + E +P GGI++ D K + GA + + S Sbjct: 184 MCTTRIITGCGVPQLTAIGLCAEIGESYGVPVIADGGIRTSGDMVKAFAAGASTVMLGSM 243 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 + + + G Sbjct: 244 LSGTIETPGEIKNGKKQYRGMASRSAQDSWRGG 276 >UniRef50_A8VQT3 Transposase IS3/IS911 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQT3_9BACI Length = 318 Score = 61.0 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 5/106 (4%) Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 D + Q+ ++ + + Q+ GA +V+ G G D Sbjct: 95 DFIISGAGISRDMYQWGKAHDTPVLSIVSSAKLAKMSQRLGAAAVVVEGHEAGGHL-GTD 153 Query: 190 L---EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + L +V E +P+IA+GG + E E G + Sbjct: 154 RSVKDILPEVAEAVTIPVIAAGGVMSGEDIREMI-SLGASGVQMGT 198 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 2/102 (1%) Query: 33 VPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 LAK GA +V ++ K + VAE + IP AGG+ S ED Sbjct: 125 AKLAKMSQRLGAAAVVVEGHEAGGHLGTDRSVKDILPEVAEAVTIPVIAAGGVMSGEDIR 184 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +++S GA + + + +A A + Sbjct: 185 EMISLGASGVQMGTRFVATEECDAADAFKEQYVKAEETSMMM 226 >UniRef50_Q82KQ8 Putative oxidoreductase n=1 Tax=Streptomyces avermitilis RepID=Q82KQ8_STRAW Length = 755 Score = 61.0 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 40/114 (35%), Gaps = 10/114 (8%) Query: 24 RNHEIIGDIVPLAKRYAEEGADEL------VFYDITASSDGRVVDKSWVSRVAEVIDIPF 77 D V +A+ +A GAD + V D + GR + R+ +P Sbjct: 617 EGGTTAEDAVEIARAFAAHGADAIDVSTGQVVADEQPA-YGRSYQTPYADRIRGEAGVPV 675 Query: 78 CVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLA--DRFGVQCIVVG 128 G I S +D ++ G D ++ P L DP A + +V Sbjct: 676 IAVGAISSWDDVNSLILAGRTDLCALARPHLYDPHWTLHAAAEQGYTGPGVVWP 729 >UniRef50_B7J4N8 tRNA-dihydrouridine synthase A n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J4N8_ACIF2 Length = 330 Score = 61.0 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 57/196 (29%), Gaps = 19/196 (9%) Query: 71 EVIDIPFCVAGGIKSLEDA--AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 + + G A ++G D +++N + P+ + Sbjct: 70 AEHPLILQLGGDDPHAMHAAGRMARAYGYDGLNLN---VGCPSPRVQKGSFGACLMTTPD 126 Query: 129 IDTWYDAETGKYHVNQYTGDESR--TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + A G+ + +V+ V G +++ N Sbjct: 127 LVAELVAAMGESGLPVSVKHRLGLDREEDYAALRAFVETVATAGCRHFIVHARNAWLKGL 186 Query: 187 GYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + + +++ ++ H+ + +GG + F VDG + + Sbjct: 187 SPAENRDVPPLRWDWVHQLKRDLPHLTIEINGGFNDLAAVTAQFSA--VDGVMLGRAAYH 244 Query: 237 QIINIGELKAYLATQG 252 + + E++ L + Sbjct: 245 HPLLLAEIERALGRRE 260 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 31/110 (28%), Gaps = 12/110 (10%) Query: 18 VKGVQF-RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVS 67 VK E + + A G + + A G + WV Sbjct: 144 VKHRLGLDREEDYAALRAFVETVATAGCRHFIVHARNAWLKGLSPAENRDVPPLRWDWVH 203 Query: 68 RVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 ++ + + + GG L S D + + A P L+ + Sbjct: 204 QLKRDLPHLTIEINGGFNDLAAVTAQFSA-VDGVMLGRAAYHHPLLLAEI 252 >UniRef50_B1HS08 2-nitropropane dioxygenase n=2 Tax=Bacillaceae RepID=B1HS08_LYSSC Length = 335 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 9/86 (10%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--------YDLEQLKKVREVCHVPLIASGG 209 TL+ Q V++ G +VL G R + L++V +P+IA+GG Sbjct: 150 TTLEEAQLVEQAGMDAVVLQGGEAGGHRGSFTAPLQLIPLYDLLQQVAGKIAIPIIAAGG 209 Query: 210 AGTMEHFLEAFRDADVDGALAASVFH 235 T + +A + + Sbjct: 210 LVTKKDIQKALE-SGAQAVQVGTALL 234 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 10/90 (11%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVD---------KSWVSRVAEVIDIPFCVAGG 82 + A+ + G D +V + R + +VA I IP AGG Sbjct: 151 TLEEAQLVEQAGMDAVVLQGGE-AGGHRGSFTAPLQLIPLYDLLQQVAGKIAIPIIAAGG 209 Query: 83 IKSLEDAAKILSFGADKISINSPALADPTL 112 + + +D K L GA + + + L Sbjct: 210 LVTKKDIQKALESGAQAVQVGTALLVAEEC 239 >UniRef50_A3U0T3 Probable dihydroorotate dehydrogenase, catalytic subunit n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0T3_9RHOB Length = 314 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 23/118 (19%) Query: 29 IGDIVPLAKRYAEEGADEL----------------------VFYDITASSDGRVVDKSWV 66 +GDI +A+ GAD + V +T + + V V Sbjct: 167 VGDIAEMARCVEGAGADAVITANAILGMAIDAETMTPRLGNVVGGLTGPAV-KPVILRMV 225 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 ++ AE + IP GGI + ED + + GA + I + + + + D C Sbjct: 226 NQCAEAVKIPVIGCGGIATGEDVVEYMLAGASAVQIGTTNFVHTSAMEQSIDWVADYC 283 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 49/173 (28%), Gaps = 18/173 (10%) Query: 76 PFCVAGGIKSLEDAAKILSFGAD-KISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P + ++ED K+ + D +I+ ++ P L FG+ + Sbjct: 93 PVIASISADTVEDFGKLAGYITDPRIAAIEANISCPNLRAH-GRAFGMDPVASAQVITAM 151 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD----------GV 184 + ++ A I+ ++ + G Sbjct: 152 KANTTLPIWAKLTPNVGDIAEMARCVEGAGADAVITANAILGMAIDAETMTPRLGNVVGG 211 Query: 185 RNGYDLE-----QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 G ++ + + E +P+I GG T E +E A + Sbjct: 212 LTGPAVKPVILRMVNQCAEAVKIPVIGCGGIATGEDVVEYM-LAGASAVQIGT 263 >UniRef50_C1I8I7 N-acetylmannosamine-6-phosphate 2-epimerase n=7 Tax=Firmicutes RepID=C1I8I7_9CLOT Length = 232 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 57/209 (27%), Gaps = 39/209 (18%) Query: 35 LAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDI--PFCVAGGIKSLEDAAK 91 +A+ + GA + + + + + + + P+ ++++ Sbjct: 37 MARAAKKAGACAIRTNGVRDVIGIKKETNLPVIGLIKKSYEGFEPYIT----FTMDEIDS 92 Query: 92 ILSFGADKISINSPALADP------TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + GAD I+ + I + +++ ++ I + Sbjct: 93 LAKAGADIIAFDCTLRKRKDGRTVEEFIKAIKEKYPNILLMADISNLEEGINAFRAGVDM 152 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI 205 G + LD G D E +K + E +P+I Sbjct: 153 VGTTLSGYTSYTPKLD-------------------------GPDYELVKNLVESIDIPVI 187 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVF 234 A G +E F D + Sbjct: 188 AEGRIHYPSQAVEMF-DLGAYAVVVGGAI 215 Score = 42.2 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 20/56 (35%) Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 D V + E IDIP G I A ++ GA + + + TR Sbjct: 169 GPDYELVKNLVESIDIPVIAEGRIHYPSQAVEMFDLGAYAVVVGGAITRPLEITTR 224 >UniRef50_O29991 NADH-dependent flavin oxidoreductase n=1 Tax=Archaeoglobus fulgidus RepID=O29991_ARCFU Length = 378 Score = 61.0 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 16/106 (15%) Query: 29 IGDIVPLAKRYAEEGADELVF---------YDIT------ASSDGRVVDKSWVSRVAEVI 73 I + V +AK + G + + ++ + G + + R+ E + Sbjct: 245 IDEAVRIAKLLDDAGFEAIEVSGGMYESIYHNRYNVVSQKVAKSGEAYFREYAFRIKEAV 304 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 IP GGIKS + A ++L D +S++ P + DP L ++ + Sbjct: 305 SIPVMAVGGIKSRQTAEELLKK-VDFVSMSRPLIRDPYLPKKMMNG 349 Score = 45.6 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 53/185 (28%), Gaps = 27/185 (14%) Query: 86 LEDAAKILSFGADKISINSPA------LADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 ++ A + G D + +++ P + R D +G + + +D + Sbjct: 167 VKAALRAEKAGFDAVQLHAAHGYLLSEFISPHVNRR-KDEYGQERAKILLDIFDGIRQRS 225 Query: 140 YHVNQYTGDESRTRVTQWE---TLDWVQEVQKRGAGEI---------VLNMM------NQ 181 + E + + + G I + + Sbjct: 226 RIPVMIKMNACDFVPGGLEIDEAVRIAKLLDDAGFEAIEVSGGMYESIYHNRYNVVSQKV 285 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 Y E +++E +P++A GG + + E + VD + + Sbjct: 286 AKSGEAYFREYAFRIKEAVSIPVMAVGGIKSRQTAEELLKK--VDFVSMSRPLIRDPYLP 343 Query: 242 GELKA 246 ++ Sbjct: 344 KKMMN 348 >UniRef50_Q9F8I8 Cyclase (Fragment) n=1 Tax=Carboxydothermus hydrogenoformans RepID=Q9F8I8_CARHY Length = 114 Score = 60.6 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 37/62 (59%) Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 T + ++W +EV++ GAGEI+L M++DG ++GYDLE +++ + +P Sbjct: 53 FEVYIHGGRTPTGIDAVEWAKEVERLGAGEILLTSMDRDGTKDGYDLELTREIADAVKIP 112 Query: 204 LI 205 +I Sbjct: 113 VI 114 Score = 41.8 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 18/58 (31%) Query: 21 VQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFC 78 + D V AK GA E++ + D +A+ + IP Sbjct: 57 IHGGRTPTGIDAVEWAKEVERLGAGEILLTSMDRDGTKDGYDLELTREIADAVKIPVI 114 >UniRef50_A1RXV6 Geranylgeranylglyceryl phosphate synthase n=4 Tax=Archaea RepID=GGGPS_THEPD Length = 255 Score = 60.6 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 35/115 (30%), Gaps = 6/115 (5%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDI---VPLAKRYAEEGADELVFYDITASSDGRVVDKSWV 66 + V +G V V + A G + + G V V Sbjct: 132 IIVGEGGAVSIVSYTRPLPFAKPEVVAAYALAAEYMGFQFVYLEGGSG---GEPVPPKIV 188 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V V +P V GGI+S E A ++ GAD I + + + Sbjct: 189 KMVKGVTTLPLIVGGGIRSPEVAKELAKAGADIIVTGTIVEESENIRETIGRIVR 243 Score = 50.2 bits (119), Expect = 7e-05, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 68/227 (29%), Gaps = 17/227 (7%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVP-LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVA 70 +R+ + + ++ +A+ AE G ++ + + V + Sbjct: 13 IREHGAIHMTLIDPEKTTPEVAARIAREVAEAGTSAIMVGG--SIGVSEAMTDEVVLAIK 70 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA-LADPTLITRLADRFGVQCIVVGI 129 ++P + G + LS AD + S +P IT + G+ Sbjct: 71 RSTEVPVILFPGSPT------ALSRHADAVWFLSVLNSQNPYFITGAQMQGAPIVKRYGL 124 Query: 130 DTWYDAE---TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + V+ + + + G + L + Sbjct: 125 EVLPLGYIIVGEGGAVSIVSYTRPLPFAKPEVVAAYALAAEYMGFQFVYLEGGSG---GE 181 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + +K V+ V +PLI GG + E + A D + ++ Sbjct: 182 PVPPKIVKMVKGVTTLPLIVGGGIRSPE-VAKELAKAGADIIVTGTI 227 >UniRef50_A7VEV6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A7VEV6_9CLOT Length = 325 Score = 60.6 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 23/202 (11%), Positives = 54/202 (26%), Gaps = 15/202 (7%) Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKS------LEDAAKILSFGADKISINSPALADP 110 G+ ++ V + V I + ++ A + G D+I+IN + Sbjct: 51 KGKPFRHRELADVRPEHNTGITVIPQILTNHSEGFIKAAKALADMGYDEININMGCPSGT 110 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + + +D + + D + + K Sbjct: 111 VVSKGKGSGMLADPV--KLDHFLEEIFAADICKISVKTRLGMEFADEFP-DILDVLMKYP 167 Query: 171 AGEIVLNMMNQDGVRNG-YDLEQ----LKKVREVCHVPLIASGGAGTMEHFLEAFR-DAD 224 E++++ ++ G DL +++ E L +G + Sbjct: 168 FTEVIIHPRTREDYYGGSVDLAMFDLAVERYGEQTESVLCYNGDITDAAGYKNIQERYPQ 227 Query: 225 VDGALAASVFHKQIINIGELKA 246 VD + E+ Sbjct: 228 VDKIMIGRGIIGNPFLPQEIAE 249 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 46/164 (28%), Gaps = 13/164 (7%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSW 65 I D+ VK E + + + E++ + T VD + Sbjct: 134 IFAADICK-ISVKTRLG--MEFADEFPDILDVLMKYPFTEVIIHPRTREDYYGGSVDLAM 190 Query: 66 ----VSRVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLA-- 117 V R E + C G I I DKI I + +P L +A Sbjct: 191 FDLAVERYGEQTESVLCYNGDITDAAGYKNIQERYPQVDKIMIGRGIIGNPFLPQEIAEQ 250 Query: 118 -DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL 160 + ++ D + + + + + E L Sbjct: 251 RCCYNAGILLAFHDELFAGYMEAGLGARNVMFKMKELWSFMECL 294 >UniRef50_A9UW45 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UW45_MONBE Length = 267 Score = 60.6 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 44/158 (27%), Gaps = 9/158 (5%) Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 AE + + FC G K+ + +N R + ++ Sbjct: 83 AENVIVQFCANNGDFFARAIDKV-RLRCRGVDLNLS-----WTSKRAERGGYGEYLLKNP 136 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-- 187 + R + + ET+ Q ++ G + + + + Sbjct: 137 TQLESVVRAGVATQVPITCKLRLQASVAETIATAQRLEAWGVSLLTIEGRTSAQLDSRRG 196 Query: 188 -YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + E + ++R +P++ +G E Sbjct: 197 IANWEDIAQIRAAVGIPILYNGDLVVREQIEACLAYTG 234 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 26/70 (37%), Gaps = 3/70 (4%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 + + + A+R G L T++ + + ++++ + IP G + Sbjct: 163 VAETIATAQRLEAWGVSLLTIEGRTSAQLDSRRGIANWEDIAQIRAAVGIPILYNGDLVV 222 Query: 86 LEDAAKILSF 95 E L++ Sbjct: 223 REQIEACLAY 232 >UniRef50_Q2NEG1 PyrD n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NEG1_METST Length = 306 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 23/118 (19%) Query: 29 IGDIVPLAKRYAEEGADELVFY----------------------DITASSDGRVVDKSWV 66 + DI +AK + GAD L A + + V Sbjct: 169 VTDITEIAKAAEDAGADALTLINSVGPGLRIDYKTARPILNNVFGGIAGPMIKPIALKCV 228 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD-PTLITRLADRFGVQ 123 + E +DIP GGI++ +DA + L GA + I + + + P + + Sbjct: 229 YKTYETVDIPLFGVGGIRTYKDALEFLYAGASLLQIGTSIMYEGPEIFKNITHDLSNF 286 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 30/116 (25%), Gaps = 24/116 (20%) Query: 158 ETLDWVQEVQKRGAGEIVL-------------NMMN---------QDGVRNGYDLEQLKK 195 + + + + GA + L + L+ + K Sbjct: 171 DITEIAKAAEDAGADALTLINSVGPGLRIDYKTARPILNNVFGGIAGPMIKPIALKCVYK 230 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF-HKQIINIGELKAYLAT 250 E +PL GG T + LE A + ++ + L+ Sbjct: 231 TYETVDIPLFGVGGIRTYKDALEFL-YAGASLLQIGTSIMYEGPEIFKNITHDLSN 285 >UniRef50_C2BGB2 NADH:flavin oxidoreductase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BGB2_9FIRM Length = 639 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 73/228 (32%), Gaps = 18/228 (7%) Query: 33 VPLAKRYAEEGADELVFY-DITASSD--------GRVVDKSWVSRVAEVIDIPFCVAGGI 83 + +A Y + GAD L ++ ++ + + + IP G I Sbjct: 236 IKVAIAYEKAGADALDISQGCNSAMAISTPPYFLKTAFNEDNCREIKKHVSIPVICPGRI 295 Query: 84 KSLEDAAKILSFG-ADKISINSPALADPTLITRL--ADRFGVQCIVVGIDTWYDAETGKY 140 S E A +++S G AD + + LADP + + + V + Sbjct: 296 ISPEIAEEVISSGAADFVDVGRAQLADPDFVKKAEEGRADEITLCVGCTQACFSRIMKGD 355 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC 200 + + E +++ G G L ++ G+ + +K R Sbjct: 356 VSCIFNPQTGHEIDRKIEATTNPKKILVIGGGPAGLEA-SRVAALRGHKVILFEKTRR-L 413 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAA---SVFHK-QIINIGEL 244 I +G A +A V A A + + NI E+ Sbjct: 414 GGQYILAGAAPHKSILADAVSQMGVKAASAGVDIRLATEANPENIKEI 461 Score = 41.8 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 6/62 (9%), Positives = 21/62 (33%) Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + ++ + +++++ +P+I G + E E D + + Sbjct: 270 KTAFNEDNCREIKKHVSIPVICPGRIISPEIAEEVISSGAADFVDVGRAQLADPDFVKKA 329 Query: 245 KA 246 + Sbjct: 330 EE 331 >UniRef50_C0EUE6 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EUE6_9FIRM Length = 329 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 14/152 (9%), Positives = 46/152 (30%), Gaps = 5/152 (3%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + G ++++N + + + F G+ ++D + ++ Sbjct: 83 AGMMEELGYKEVNLNLGCPSGTVVSKKKGSGFLADL--EGMKYFFDEVFSQVNIEVSVKT 140 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIAS 207 E +D + E++++ ++ + E + + P+ + Sbjct: 141 RLGVE-NPDEVIDLMNIYNAFPISEVIVHARVREDYYKRPVNQEAFAQCLAISKHPVCYN 199 Query: 208 GGAGTMEHFLEA-FRDADVDGALAASVFHKQI 238 G T++ + D+ + Sbjct: 200 GDLFTVQDIENLTAKFPDIKAVMLGRGMIANP 231 Score = 50.2 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 18/162 (11%), Positives = 47/162 (29%), Gaps = 7/162 (4%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-RVVDKSWVSRVAEVIDIP 76 VK E +++ L Y E++ + R V++ ++ + P Sbjct: 138 VKTRLGV--ENPDEVIDLMNIYNAFPISEVIVHARVREDYYKRPVNQEAFAQCLAISKHP 195 Query: 77 FCVAGGIKSLEDAAKILSFGAD--KISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 C G + +++D + + D + + +A+P L R + Sbjct: 196 VCYNGDLFTVQDIENLTAKFPDIKAVMLGRGMIANPQLTEVFCGREAHGDSTSVENRQGL 255 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + + ++++ + I Sbjct: 256 DYVRWKAFLDEL--CYGYEHIMSGGRNVLFKLKEVWSYMITF 295 >UniRef50_C6CUD5 Indole-3-glycerol-phosphate synthase n=3 Tax=Bacteria RepID=C6CUD5_PAESJ Length = 265 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 58/214 (27%), Gaps = 42/214 (19%) Query: 32 IVPLAKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 LA Y GAD L D + + +++ + E + P I Sbjct: 73 PAELAAAYERAGADCLSVLTDRD---YFQGSN-EYLTLIKETVSNPLLRKDFIIDYRQVY 128 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD + + + L L + Sbjct: 129 EARVIGADAVLLIAAILTSSELSE--------------------------LYDTAKSLGM 162 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMN-----QDGVRNGYDLEQLKKVREVCHVPLI 205 V + + + ++ A I +N + D ++ + K V +I Sbjct: 163 DVLVEVHDREELERVLELDKATLIGVNNRDLKSFVTDLHTTEALIDLIPK-----GVTVI 217 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + G + ++ + G L F +Q Sbjct: 218 SESGIAGRKD-MDYLQTVGAQGVLIGEHFMRQPD 250 >UniRef50_B8I0V0 Indole-3-glycerol phosphate synthase n=3 Tax=Firmicutes RepID=TRPC_CLOCE Length = 260 Score = 60.6 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 64/218 (29%), Gaps = 39/218 (17%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + +AK Y GA + +T D ++ V + + IP + Sbjct: 73 IDIAKDYEAAGAGAISV--LTEPEFFLGSD-QYLKDVKKTVSIPVLRKDFTIDPYQIYEA 129 Query: 93 LSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 GAD + + L TL ++AD G+ C+V D Sbjct: 130 ALIGADCVLLICALLDTDTLKEYIKIADGLGLSCLVEAHD-------------------- 169 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASG 208 + V+ + G+ + +N N ++RE+ + ++ Sbjct: 170 ---------ENEVKSAIEAGSRIVGVNNRNLKTFEVDITNSI--RLRELVPSDISFVSES 218 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G T + A R L + EL Sbjct: 219 GIRTAQDIS-ALRRIGASAVLIGETLMRSGDTGAELAK 255 >UniRef50_Q09E70 Thiazole biosynthesis protein ThiG n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09E70_STIAU Length = 274 Score = 60.3 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + +A+ G L +S +VD + +V + + IP V GG+ S A+ Sbjct: 165 IQVARELERMGCCALRIMAAPVASGRGLVDPKSLRQVLDAVSIPVIVEGGLGSPAQVAQA 224 Query: 93 LSFGADKISINSPALADPT 111 + GAD + +N+ P Sbjct: 225 MELGADAVLVNTAVAQAPD 243 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 36/119 (30%), Gaps = 1/119 (0%) Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 V D + + + +E+++ G + + R Sbjct: 131 VRPADNLPHNAQTVEAAQELLNEGCAVMPFILPDIQVARELERMGCCALRIMAAPVASGR 190 Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 D + L++V + +P+I GG G+ +A D L + + + Sbjct: 191 GLVDPKSLRQVLDAVSIPVIVEGGLGSPAQVAQAME-LGADAVLVNTAVAQAPDPVRMA 248 >UniRef50_P32370 NADH-dependent flavin oxidoreductase n=4 Tax=Clostridium RepID=BAIH_EUBSP Length = 661 Score = 60.3 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 69/206 (33%), Gaps = 19/206 (9%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS----------DGRVVDKSWVSR 68 + V + D++ LA ++ G L T R V+ S Sbjct: 228 RMVGGN---SLEDMLYLAPKFEAAGVSMLEVSGGTQYEGLEHIIPCQNKSRGVNVYEASE 284 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRF--GVQCI 125 + +V+ IP G I + AA+I+ G D +++ P LADP L + + + Sbjct: 285 IKKVVGIPVYAVGKINDIRYAAEIVERGLVDGVAMGRPLLADPDLCKKAVEGQFDEITPC 344 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE-TLDWVQEVQKRGAG-EIVLNMMNQDG 183 + + + + + ++V GAG ++ + Sbjct: 345 ASCGGSCISRSEAAPECHCHINPRLGREYEFPDVPAEKSKKVLVIGAGPGGMMAAVTAAE 404 Query: 184 VRNGYD-LEQLKKVREVCHVPLIASG 208 + E K+ ++ ++A G Sbjct: 405 RGHDVTVWEADDKIGGQLNLAVVAPG 430 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 25/211 (11%), Positives = 55/211 (26%), Gaps = 29/211 (13%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 A+R E G + + A +P G S ++ + Sbjct: 154 ARRAEEAGCGAISLH------------------CAHAYMLP----GSFLSPLRNKRMDEY 191 Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 G +++ A +I + + + G + + Sbjct: 192 GGS---LDNRARFVIEMIEEARRNVSPDFPIFLRISGDERMVGGNSLEDMLYLAPKFEAA 248 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 L+ Q G I + G ++ + ++++V +P+ A G + + Sbjct: 249 GVSMLEVSGGTQYEGLEHI----IPCQNKSRGVNVYEASEIKKVVGIPVYAVGKINDIRY 304 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKA 246 E VDG + Sbjct: 305 AAEIVERGLVDGVAMGRPLLADPDLCKKAVE 335 >UniRef50_C0QYH6 Dihydroorotate dehydrogenase n=2 Tax=Brachyspira RepID=PYRD_BRAHW Length = 303 Score = 60.3 bits (145), Expect = 6e-08, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 23/117 (19%) Query: 29 IGDIVPLAKRYAEEGADELVFY----------------------DITASSDGRVVDKSWV 66 + DI +AK + GAD + ++ + R + V Sbjct: 170 VTDIASIAKAVEDAGADSVSLVNTFLSMKIDTKTRKPLLGNIFGGLSGA-CIRPIAVRMV 228 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 +V + + IP GGI + DA + + GA +SI + ++P L + + Sbjct: 229 YQVYKAVKIPIVGMGGITNYNDALEFILAGASLVSIGAGIFSNPILPIEVINGIDNY 285 Score = 45.6 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 5/72 (6%) Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 + + +V + +P++ GG LE A + I E+ Sbjct: 221 RPIAVRMVYQVYKAVKIPIVGMGGITNYNDALEFI-LAGASLVSIGAGIFSNPILPIEVI 279 Query: 246 ----AYLATQGV 253 YL + Sbjct: 280 NGIDNYLKENNI 291 >UniRef50_B0KBD0 NADH:flavin oxidoreductase/NADH oxidase n=11 Tax=Thermoanaerobacteraceae RepID=B0KBD0_THEP3 Length = 641 Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Query: 29 IGDIVPLAKRYAEEGADELVF----------YDITASSDGRVVDKSWVSRVAEVIDIPFC 78 + D + LAK ++G + + + + + S++ + ++IP Sbjct: 230 LEDAIRLAKILEDKGVAAIDVSLGSSCESGAITLQTLGTQKGLAWEFASKIKKQVNIPVI 289 Query: 79 VAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 G I + E A +IL G AD +++ P +ADP + + Sbjct: 290 AVGRINTPELAEEILVSGKADLVALGRPLVADPLFVEKA 328 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 10/98 (10%) Query: 157 WETLDWVQEVQKRGAGEIVLN--------MMNQD--GVRNGYDLEQLKKVREVCHVPLIA 206 + + + ++ +G I ++ + G + G E K+++ ++P+IA Sbjct: 231 EDAIRLAKILEDKGVAAIDVSLGSSCESGAITLQTLGTQKGLAWEFASKIKKQVNIPVIA 290 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 G T E E D + + + Sbjct: 291 VGRINTPELAEEILVSGKADLVALGRPLVADPLFVEKA 328 >UniRef50_Q3AC05 Dihydroorotate dehydrogenase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=PYRD_CARHZ Length = 307 Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 36/116 (31%), Gaps = 21/116 (18%) Query: 29 IGDIVPLAKRYAEEGADELVF---------------------YDITASSDGRVVDKSWVS 67 + DI AK GAD L + + R + V Sbjct: 169 VTDITVYAKAAENAGADALTLINTFTGMVIDVKSKKPILGNKHGGVSGPAIRPMAVKMVY 228 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + IP GGI S E A + GA I + S +P + RL G Sbjct: 229 DCFKAVSIPIIGVGGIDSKEAALEFFLAGATAIQVGSQNFVEPGFMPRLIRELGEY 284 Score = 41.8 bits (97), Expect = 0.023, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 30/120 (25%) Query: 162 WVQEVQKRGAGEIVL----NMM------------NQDGVRNGYDL-----EQLKKVREVC 200 + + + GA + L M N+ G +G + + + + Sbjct: 175 YAKAAENAGADALTLINTFTGMVIDVKSKKPILGNKHGGVSGPAIRPMAVKMVYDCFKAV 234 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAAS------VFHKQIINIGELKAYLATQGVE 254 +P+I GG + E LE F A S F I EL YL + +E Sbjct: 235 SIPIIGVGGIDSKEAALEFF-LAGATAIQVGSQNFVEPGFM--PRLIRELGEYLQEENIE 291 >UniRef50_B0VIM3 Dihydroorotate dehydrogenase, catalytic subunit (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIM3_9BACT Length = 305 Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 21/103 (20%) Query: 29 IGDIVPLAKRYAEEGADELVFYD---------ITA------------SSDGRVVDKSWVS 67 + DI +AK E GA + + + + + Sbjct: 173 VTDIAVIAKAAEEGGATAISLINTIWGMAIDYRNGKSRIKKGIGGYSGIGIKPLALALTY 232 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 R A+ + IP GGI + +DA + GA I++ + DP Sbjct: 233 RAAQAVKIPVIAMGGIYNWQDALEFFWAGASMIALGTANFIDP 275 Score = 42.2 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 1/62 (1%) Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 L + + +P+IA GG + LE F A + + + ++ L Sbjct: 227 ALALTYRAAQAVKIPVIAMGGIYNWQDALEFFW-AGASMIALGTANFIDPLAVDKVYEGL 285 Query: 249 AT 250 ++ Sbjct: 286 SS 287 >UniRef50_A8ZZX0 Indole-3-glycerol phosphate synthase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=TRPC_DESOH Length = 263 Score = 60.3 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 66/221 (29%), Gaps = 37/221 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D A +Y GA + +T + + S + + + +P I S Sbjct: 75 DPADCAAKYEAGGAAAISV--LTDAPYFKGS-LSDLKQARKACSLPVLRKEFILSDYQVY 131 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GAD + + L L + + + G ++ Sbjct: 132 ESAAAGADAVLLIVRILTQTMLSDLIG------------------------LCRALGLDT 167 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH---VPLIAS 207 + L+ GA I +N + + D+ ++ VP+ A+ Sbjct: 168 LVEIHDENDLETAT---NAGAKLIGINNRDLKTFKT--DIAVATRLVSNFGPDQVPV-AA 221 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 G G+ E + A + L + + LK L Sbjct: 222 SGIGSREDIERT-KAAGIYNFLIGESLVRAEDTVSFLKQLL 261 >UniRef50_Q72NP6 Indole-3-glycerol phosphate synthase n=4 Tax=Leptospira RepID=TRPC_LEPIC Length = 252 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 64/213 (30%), Gaps = 40/213 (18%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK Y E GA + +T + + V+ + IP I + Sbjct: 68 PVQIAKTYEELGASAISV--LTDQNYFGGS-LEDLKDVSSELKIPVLRKDFILDEIQIRE 124 Query: 92 ILSFGADKISINSPAL--ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 +FGA I + L +LA G+ C+V Sbjct: 125 ARAFGASAILLIVRILTPEQIKSFLKLASSLGMDCLVEVH-------------------- 164 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV--CHVPLIAS 207 T D + GA I +N + D + + +++V ++ + Sbjct: 165 ---------TSDEAKLALDCGAEIIGINTRDLDTFQIHQN--LVEEVSAFLPPNIVKVGE 213 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G + VD AL + F ++ Sbjct: 214 SGIKKRSDLDTFRKL--VDAALIGTYFMEKQDI 244 >UniRef50_A4A9J1 2-nitropropane dioxygenase, NPD n=1 Tax=Congregibacter litoralis KT71 RepID=A4A9J1_9GAMM Length = 345 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 60/214 (28%), Gaps = 29/214 (13%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V L + A + Y++ R + A Sbjct: 45 AVALIEELEAIRASGITLYNLN-FFCHRPPLRDAQVEAR-------------WRGALAPY 90 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + D SI A P LA G + +V + + Sbjct: 91 FREYQIDPTSIPEGAGRVPFSSETLALIAGFEPPIVSFHFGLPDRGSIDGIKSWG----G 146 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----------DLEQLKKVREVCH 201 + T D + + GA I+ + G R + + L+ ++ Sbjct: 147 QIWSSATTADEARWLMDHGADAIIAQGIEAGGHRGMFLTRDLGSQLGTMTLLEAIQRATT 206 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +P+IA+GG T E EA DA A + + Sbjct: 207 LPVIAAGGLSTPEQAREAL-DAGAWAVQAGTAYL 239 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 10/88 (11%) Query: 32 IVPLAKRYAEEGADELVFYD----------ITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 A+ + GAD ++ +T ++ + + + +P AG Sbjct: 154 TADEARWLMDHGADAIIAQGIEAGGHRGMFLTRDLGSQLGTMTLLEAIQRATTLPVIAAG 213 Query: 82 GIKSLEDAAKILSFGADKISINSPALAD 109 G+ + E A + L GA + + L Sbjct: 214 GLSTPEQAREALDAGAWAVQAGTAYLCC 241 >UniRef50_B3QW78 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW78_CHLT3 Length = 256 Score = 59.9 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 2/71 (2%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 A G + + + + V V + + +P V GGI+S + + Sbjct: 164 ALAAEYLGMKMIYLEAGSGADESVPE--EMVELVCQTVSLPVIVGGGIRSAQAVRSKVDA 221 Query: 96 GADKISINSPA 106 GA + + + Sbjct: 222 GASFVVVGNAF 232 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 65/230 (28%), Gaps = 26/230 (11%) Query: 19 KGVQF-------RNHEIIGDIVP-LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVA 70 K + + + + K GAD + S ++V ++ Sbjct: 15 KARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLI---GGSLLFSNRFDAYVQQIK 71 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKIS-INSPALADPT-LITRLADRFGVQCIVVG 128 D+P + G S++ +S AD I ++ + +P LI Sbjct: 72 SATDLPVILFPG-HSVQ-----ISPSADAILFLSLLSGRNPEFLIGHHVTAAPSIKAFGL 125 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ----EVQKRGAGEIVLNMMNQDGV 184 + S T + + G I L G Sbjct: 126 ESMPTAYLLVESGRKTAVEFMSNTEPIPRHKPELAAVHALAAEYLGMKMIYLEA--GSGA 183 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 E ++ V + +P+I GG + + + + DA + + F Sbjct: 184 DESVPEEMVELVCQTVSLPVIVGGGIRSAQ-AVRSKVDAGASFVVVGNAF 232 >UniRef50_A4E892 Putative uncharacterized protein n=4 Tax=Collinsella RepID=A4E892_9ACTN Length = 317 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 13/160 (8%), Positives = 37/160 (23%), Gaps = 5/160 (3%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 + G ++++N + + F ++ + + + Sbjct: 77 AVQVLADMGYREVNLNLGCPSGTVVAKGKGSGFLRNL--DELEAFLSDVCERSPLPVSVK 134 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 E + + E++++ Q G E + E P+ Sbjct: 135 TRLGLENDD-EYERVLDLYCRMPLAELIVHPRVQKDRYTGLPRKEFYGETLERAPFPVAY 193 Query: 207 SGGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELK 245 +G +E + +K Sbjct: 194 NGDIFDLEDMDALVEAYPGTRHVMLGRGLLANPALARMVK 233 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 9/141 (6%) Query: 18 VKGVQF-RNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDI 75 VK N + ++ L Y EL+ + + K + E Sbjct: 133 VKTRLGLENDDEYERVLDL---YCRMPLAELIVHPRVQKDRYTGLPRKEFYGETLERAPF 189 Query: 76 PFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTL--ITRLADRFGVQCIVVGIDT 131 P G I LED ++ G + + LA+P L + + + DT Sbjct: 190 PVAYNGDIFDLEDMDALVEAYPGTRHVMLGRGLLANPALARMVKGGPAATAAELHRFHDT 249 Query: 132 WYDAETGKYHVNQYTGDESRT 152 + A + N + Sbjct: 250 LFAAYAEEIGGNAVFRMKEWW 270 >UniRef50_P03964 Indole-3-glycerol phosphate synthase n=11 Tax=Bacillus RepID=TRPC_BACSU Length = 249 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 57/206 (27%), Gaps = 33/206 (16%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK Y AD + T G S++S V + IP I SL + Sbjct: 62 PVQIAKDYEAAKADAISVLTDTPFFQGEN---SYLSDVKRAVSIPVLRKDFIDSL-QVEE 117 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 GAD I + L L + V+ Sbjct: 118 SRRIGADAILLIGEVLDPLHLHELYLEAGEKGMDVLVEVH-------------------- 157 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGA 210 + Q ++ + +N N EQ+ + + L++ G Sbjct: 158 ------DASTLEQILKVFTPDILGVNNRNLKTFETSVKQTEQIASLVPKESL-LVSESGI 210 Query: 211 GTMEHFLEAFRDADVDGALAASVFHK 236 G++EH + L + Sbjct: 211 GSLEHLT-FVNEHGARAVLIGESLMR 235 >UniRef50_A5F2I8 Putative uncharacterized protein n=2 Tax=Vibrio cholerae RepID=A5F2I8_VIBC3 Length = 157 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 2/64 (3%) Query: 177 NMMNQDGVR--NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + + G + + ++R+ C +PLIA+G + VD + Sbjct: 2 HARTKAGGYKASEIKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGA 61 Query: 235 HKQI 238 Sbjct: 62 LNVP 65 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 14/132 (10%), Positives = 37/132 (28%), Gaps = 3/132 (2%) Query: 49 FYDITASSDGRVVD--KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSP 105 + T + + + ++ ++ + IP G + + D + G D + + Sbjct: 1 MHARTKAGGYKASEIKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRG 60 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 AL P L + +D + ++ +R + + Sbjct: 61 ALNVPNLGNVVKHNHAAMPWHEVVDLLLRYTQFEVRGDKGKYYPNRIKQWFAYLRHAYPQ 120 Query: 166 VQKRGAGEIVLN 177 + L Sbjct: 121 ANELFGELRTLT 132 >UniRef50_Q2SS69 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=5 Tax=Mycoplasma RepID=NANE_MYCCT Length = 226 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 65/198 (32%), Gaps = 53/198 (26%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIK------------SLEDAAKILSFGADKISINSPA 106 R+ + V +V+D+P G IK ++++ +++ D I++++ Sbjct: 45 RLSQVEHIKAVKQVVDVPII--GLIKKHYDNSEVFITPTIKEVDQLVDLKVDIIALDATL 102 Query: 107 LADPT-----LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 P L+ + ++ Q ++ +++ Sbjct: 103 RTRPDQDLTNLVKTIKTKYPNQLLLADC----------------------------SSVE 134 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYD-----LEQLKKVREVCHVPLIASGGAGTMEHF 216 Q G I + G++ + L+ +++V P+IA GG T + Sbjct: 135 DAINAQNLGFDLIASTLRGSTKQTKGHNNLENNYQFLRDLKKVITKPIIAEGGIWTPQQA 194 Query: 217 LEAFRDADVDGALAASVF 234 E + + + + Sbjct: 195 KEIL-NLGIHSVVVGTAI 211 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 5/78 (6%) Query: 33 VPLAKRYAEEGADEL--VFYDITASSDGRVV---DKSWVSRVAEVIDIPFCVAGGIKSLE 87 V A G D + T + G + ++ + +VI P GGI + + Sbjct: 133 VEDAINAQNLGFDLIASTLRGSTKQTKGHNNLENNYQFLRDLKKVITKPIIAEGGIWTPQ 192 Query: 88 DAAKILSFGADKISINSP 105 A +IL+ G + + + Sbjct: 193 QAKEILNLGIHSVVVGTA 210 >UniRef50_O27697 Tryptophan synthase alpha chain n=3 Tax=Methanobacteriaceae RepID=TRPA_METTH Length = 270 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 59/248 (23%), Gaps = 56/248 (22%) Query: 20 GVQFRNHEIIGDI-----VPLAKRYAEEGADELVF--------YDIT----------ASS 56 G F + GD + + + + GAD L D T + Sbjct: 18 GCAFVPFVVAGDPDMETSLEIIRTLVDAGADALEVGFPFSDPIADGTSVQGADLRALRAG 77 Query: 57 DGRVVDKSWVSRVAEVIDIPF--------CVAGGIKSLEDAAKILSFGADKISINSPALA 108 + RV E IP G+ E + G I A Sbjct: 78 MTTEKCFQLIERVREFTSIPIGLLVYYNLIYRMGVD--EFYRRAAEAGVTGIL---AADL 132 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 P + I + + V+ V+ Sbjct: 133 PPEEASDALRAAEKYDIDQIFIVAPTTGSERLKRISEVSSGFHYLVSVMGVTGARSRVED 192 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 +E +K+V+ +P++ G EH RDA DG Sbjct: 193 A-------------------TIELIKRVKAEGSLPVMVGFGVSRPEHV-RMLRDAGADGV 232 Query: 229 LAASVFHK 236 + S Sbjct: 233 IVGSAIID 240 >UniRef50_Q39TJ5 2,4-dienoyl-CoA reductase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TJ5_GEOMG Length = 688 Score = 59.9 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 46/153 (30%), Gaps = 14/153 (9%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGR---------VVDKSWVSRVAEVIDIPFCVAGGI 83 V A + GAD L T G V + IP G I Sbjct: 239 VAFAVELEKAGADVLNVSLATPPICGGYVPTGADPVATHVHLAEAVKRAVGIPVIGVGRI 298 Query: 84 KSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 K+ + A IL+ G D ++I ADP + A+ + IV ID E Sbjct: 299 KTPDVAESILAQGKVDLVAIGRQLFADPHWPLKAAEG-RIAEIVPCIDCHECYERATAGE 357 Query: 143 NQYTGDES---RTRVTQWETLDWVQEVQKRGAG 172 R + + + V G G Sbjct: 358 GVECTVNYAAGREDERRIRPAERKRRVLVVGGG 390 Score = 42.5 bits (99), Expect = 0.013, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 10/95 (10%) Query: 160 LDWVQEVQKRGAGEIVLN----MMNQDGVRNGYD-----LEQLKKVREVCHVPLIASGGA 210 + + E++K GA + ++ + V G D + + V+ +P+I G Sbjct: 239 VAFAVELEKAGADVLNVSLATPPICGGYVPTGADPVATHVHLAEAVKRAVGIPVIGVGRI 298 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQI-INIGEL 244 T + VD + Sbjct: 299 KTPDVAESILAQGKVDLVAIGRQLFADPHWPLKAA 333 >UniRef50_A8S5R8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S5R8_9CLOT Length = 636 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 54/172 (31%), Gaps = 18/172 (10%) Query: 18 VKGVQFRNHEIIG----DIVPLAKRYAEEGADELVFYD-ITASSDG-------RVVDKSW 65 V+ + G D LA E GAD L + G + Sbjct: 214 VRL-NGDDMVSDGNLGRDSAALAMLMEEAGADLLDVSGGMNGVGYGIAPAAVKTGYNTDP 272 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQC 124 + V+ IP VAG I E A +L G + I++ ADP + + A + Sbjct: 273 AEEIRRVVSIPVAVAGRINEPEYAESLLRKGDVEFITLGRALFADPEFVNKAAQGKEEEI 332 Query: 125 IVV----GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 G++ R V + + + ++V GAG Sbjct: 333 CPCVGCLQRCYGSYGHGGQFRGCMVNPFSMRETVLKIKPAETKKKVVVVGAG 384 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 22/182 (12%), Positives = 51/182 (28%), Gaps = 21/182 (11%) Query: 86 LEDAAKILSFGADKISI-------------NSPALADPTLITRLADRFGVQCIVVGIDTW 132 + A + G D + + S + R V +++ Sbjct: 145 IAAAVRAKKAGFDMVEVHCSHGYLLNDFVSPSANRRTDEFGGGITGRAKVPVMIIEGIKK 204 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL--------NMMNQDGV 184 E V D ++ +++ GA + + + V Sbjct: 205 VCGEDYPVSVRLNGDDMVSDGNLGRDSAALAMLMEEAGADLLDVSGGMNGVGYGIAPAAV 264 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + GY+ + +++R V +P+ +G E+ R DV+ + + Sbjct: 265 KTGYNTDPAEEIRRVVSIPVAVAGRINEPEYAESLLRKGDVEFITLGRALFADPEFVNKA 324 Query: 245 KA 246 Sbjct: 325 AQ 326 >UniRef50_B7EB81 cDNA clone:J013037E09, full insert sequence n=3 Tax=Oryza sativa Japonica Group RepID=B7EB81_ORYSJ Length = 158 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 5/115 (4%) Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV 202 + + + + + A E +++ ++ +G R G D E ++ + + Sbjct: 41 RYAIVTDRWQKFSDVFVDEPTLKHLAAYADEFLVHGVDVEGKRLGIDEELVELLGRYSPI 100 Query: 203 PLIASGGAGTMEHFLEAFRDAD--VDGALAASVF--HKQIINIGELKAYLATQGV 253 P+ +GG TM+ R + VD S + ++ + Q + Sbjct: 101 PVTYAGGVSTMDDLERIKRAGNSRVD-VTVGSALDIFGGDLPYKDVVLWHKEQNM 154 Score = 45.6 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 27/59 (45%) Query: 44 ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI 102 ADE + + + +D+ V + IP AGG+ +++D +I G ++ + Sbjct: 69 ADEFLVHGVDVEGKRLGIDEELVELLGRYSPIPVTYAGGVSTMDDLERIKRAGNSRVDV 127 >UniRef50_C7JI48 Enoyl[acyl-carrier-protein (ACP)] reductase n=8 Tax=Acetobacter pasteurianus RepID=C7JI48_ACEP3 Length = 364 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 9/85 (10%) Query: 36 AKRYAEEGADELVFYDITA--------SSDGRVV-DKSWVSRVAEVIDIPFCVAGGIKSL 86 A+ +AE GAD + I A S G V V + + I IP AGGI Sbjct: 158 ARAWAEVGADAVCAQGIEAGGHRGSFLSDGGNGVGLLPLVREIVKDISIPVIAAGGIMDG 217 Query: 87 EDAAKILSFGADKISINSPALADPT 111 E +S GAD + + + L Sbjct: 218 EGIVAAISLGADAVQMGTAFLGCSD 242 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 61/224 (27%), Gaps = 29/224 (12%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-------- 83 + + G + A ++ + ++ F V I Sbjct: 26 TAEMVVAASNAGF----LGSLGAGMMSPEEMEASLRQIKSETTAAFNVNLFIIDHLPDYQ 81 Query: 84 KSLEDAAKILSFGADKISINSPALAD--PTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 ED L +K+ ++ P+ + + V + Sbjct: 82 LDAEDIL-FLRNIYEKLELDFILPDKYAPSFQEQFEVLLHAKPPVASFTFGILTQEQVSK 140 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE---------Q 192 ++ T T E W + GA + + G R + + Sbjct: 141 LHDQGILVCGTATTSAEARAWA----EVGADAVCAQGIEAGGHRGSFLSDGGNGVGLLPL 196 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 ++++ + +P+IA+GG E + A D + F Sbjct: 197 VREIVKDISIPVIAAGGIMDGEGIVAAI-SLGADAVQMGTAFLG 239 >UniRef50_A7NDQ7 tRNA dihydrouridine synthase n=17 Tax=Francisella RepID=A7NDQ7_FRATF Length = 327 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/197 (8%), Positives = 57/197 (28%), Gaps = 20/197 (10%) Query: 71 EVIDIPFCVAG-----GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + + + G I + A ++ ++I+IN ++ + Sbjct: 58 QENPVTLQLGGCVPKDFISCGKLAEEL---DYNEININVGCPSERVKKGNFGLSLMAEPE 114 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 +V + ++ + E ++V + + G + ++ Sbjct: 115 LVADCVKAMKDNLNIPISVKCRIGYDHNDSYEELYNFVDKQVQAGIDYLCIHARKGWLSG 174 Query: 186 NGYD---------LEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + + +++ ++ L +GG T++ + + VD + + Sbjct: 175 LSPKENRTIPELKYDVVYSIKKDFPNLELGINGGITTIQEIQQHLKY--VDSVMIGREAY 232 Query: 236 KQIINIGELKAYLATQG 252 + + Q Sbjct: 233 HNPMLFKDFDNIFYNQP 249 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 12/114 (10%) Query: 18 VKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG--RVVD-------KSWVS 67 VK +H + + + + G D L + G + V Sbjct: 133 VKCRIGYDHNDSYEELYNFVDKQVQAGIDYLCIHARKGWLSGLSPKENRTIPELKYDVVY 192 Query: 68 RVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + + GGI ++++ + L + D + I A +P L + F Sbjct: 193 SIKKDFPNLELGINGGITTIQEIQQHLKY-VDSVMIGREAYHNPMLFKDFDNIF 245 >UniRef50_Q30SM1 Indole-3-glycerol phosphate synthase n=31 Tax=Epsilonproteobacteria RepID=TRPC_SULDN Length = 263 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 55/207 (26%), Gaps = 33/207 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y GA + G + +++++ + IP I + Sbjct: 73 DPIAIAQSYEIGGASAISILTEPHFFQG---NLDYLAQIRRYVSIPLLRKDFIVTKYQIL 129 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + L GAD I + + AL+ L L + + + Sbjct: 130 EALVHGADFILLIAAALSKAELKELLGYTRHLGMEALVEVHDKSDLVKAIYAGSDI---I 186 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI-ASGG 209 +T + + E + + + +I A G Sbjct: 187 GINHRNLQTFEMNMNL----------------------SYELIPLI---PNGKIIVAESG 221 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHK 236 + A VD L + Sbjct: 222 IYEHGQLED-LSKAGVDAFLVGESLMR 247 >UniRef50_C2D6B3 Dihydroorotate oxidase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6B3_9ACTN Length = 309 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 21/114 (18%) Query: 31 DIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVSRV 69 +I +A+ EGAD L + T G + V Sbjct: 178 NIPEIARALESEGADALSLINSIPGMAIDTTTYKSKLSRPTGGFSGPAIHPIAVRMVWEA 237 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + IP C GGI + +AA+ + GA +S+ L DP R+ Sbjct: 238 HKAVKIPLCGIGGITTGLEAAEFILAGATAVSVGLANLYDPMSAPRILHELCDW 291 >UniRef50_B1MZ90 tRNA-dihydrouridine synthase n=39 Tax=Bacteria RepID=B1MZ90_LEUCK Length = 378 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 13/164 (7%), Positives = 42/164 (25%), Gaps = 11/164 (6%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 A + + G + IN + + + + Sbjct: 104 AAKILPTMGYRAVDINMGCPDATVIKNGAGSDLIRHD---DLAEKIISAAKTSGLPVSVK 160 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL-EQLKKVRE-----VCH 201 E DW+ + ++ + +++ ++ + E + ++ Sbjct: 161 TRLGFYHA-EEFRDWLPIILRQNVAVLTVHLRSRKEMSKAPAHVEYIDEILAMRDKLAPK 219 Query: 202 VPLIASGGAGTMEHFLEAFR-DADVDGALAASVFHKQIINIGEL 244 + +G T L + +DG + + ++ Sbjct: 220 TLIQINGDIKTRAEGLALAKIHPGIDGIMIGRGIFENPYAFEKI 263 >UniRef50_C1F7P0 Indole-3-glycerol phosphate synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7P0_ACIC5 Length = 290 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 54/219 (24%), Gaps = 33/219 (15%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 LA+ GA L G + + + +P I + Sbjct: 96 PEWLARTLEANGAAVLSVLTDEPFFQGSLRNLEL---ASAATQLPCLRKDFIVDEYQIVE 152 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + AD I + AL D L + V+ Sbjct: 153 ARAHRADAILLIVAALTDEELARFTKAAHELDLDVLCEVH-------------------- 192 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGGA 210 + + + G +N + D+ L+ E+ + +A G Sbjct: 193 ------TAGELAR-ARDLGCDAYGVNNRDLVSFHVSLDVS-LQLAAELPQGAVHVAESGI 244 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 T E + R A L +Q L A L Sbjct: 245 HTAEDLQK-LRAAGFHAFLIGESLMRQPDPGAALAALLQ 282 >UniRef50_Q02YU5 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=30 Tax=Firmicutes RepID=NANE_LACLS Length = 234 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 81/257 (31%), Gaps = 71/257 (27%) Query: 12 VRDGQVV--KGVQFRNHEIIGD----IVPLAKRYAEEGADELVFYDITASSDGRVVDKSW 65 ++ G +V + + + + +AK + GA + R Sbjct: 10 IKGGIIVSCQALPGEPL-YSENGGVMPL-MAKAAEQAGAVAI-----------RANSVRD 56 Query: 66 VSRVAEVIDIPFCVAGGI-------------KSLEDAAKILSFGADKISINSPALADPT- 111 + + + + +P GI ++++ ++++ + I+++ Sbjct: 57 IKEIQKAVSLPII---GIIKKDYLPQKSFITATMKEIDELVATSCEVIALDCTLRERHDG 113 Query: 112 -----LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 I ++ +++ Q ++ + + E + G Sbjct: 114 LTINQFIKKIKEKYPTQLLMADCSNFKECENAYSAGVDFVGT------------------ 155 Query: 167 QKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 L+ ++ + D E L+K+ E +P+IA G + E + + V Sbjct: 156 --------TLSGYTEESKKQDEPDFELLEKLVEA-KIPVIAEGRIHSPEQA-QYVQKIGV 205 Query: 226 DGALAASVFHKQIINIG 242 DG + + + I Sbjct: 206 DGMVIGGAI-TRPLEIA 221 >UniRef50_B4U9S2 Indole-3-glycerol-phosphate synthase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9S2_HYDS0 Length = 255 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 76/220 (34%), Gaps = 37/220 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 DI A Y E GA + +G+ S++ V V++IP I Sbjct: 70 DIKDQAYIYQEAGACAISVLTEEKFFNGK---LSFLEDVKSVVNIPVMRKDFIIDPLQVY 126 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + ++ AD I LI R+ D++ ++ I + G E Sbjct: 127 EARAYKADAIL----------LIARILDKYQIEDISYEA--------------KKLGLEI 162 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD--LEQLKKVREVCHVPLIASG 208 + + ++ V+E + G LN + D + + E L +++ LIA Sbjct: 163 LMEIFEEHEIEKVKEFEIIG-----LNNRDLDTLDIDINKSKEMLPILKDYTKAVLIAES 217 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 G + E DG L + K+ +LK + Sbjct: 218 GISSKEDIEFLK---GYDGFLVGTSIMKEDDPAKKLKELV 254 >UniRef50_B0TGQ8 Dihydroorotate dehydrogenase n=32 Tax=Bacteria RepID=PYRD_HELMI Length = 309 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 21/118 (17%) Query: 29 IGDIVPLAKRYAEEGADELVFY------DIT------------ASSDG---RVVDKSWVS 67 + DI +A+ + GAD L DI G + V + Sbjct: 172 VTDITEMARAVVDAGADALALINTLLGMDIDICTRRPVLANIFGGLSGPAIKPVALRMIY 231 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 +V + +P GGI + +DA + GA I++ + +P + + C Sbjct: 232 QVYRAVHVPILGMGGIMNSQDAIAFMLAGATAIAVGTANFTNPRATMDILEGIEEYCC 289 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 60/211 (28%), Gaps = 35/211 (16%) Query: 71 EVIDIPFCVAGGIKSLEDAAKI--LSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 ID P V S+ED ++ + AD ++ ++ P + + Sbjct: 92 RQIDTPVIVNVSGNSVEDYGRLASILDEADGVAALEVNISCPNVKE---GGIQFGTLPAS 148 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI----VLNMMNQD-- 182 A + + + V GA + L M+ D Sbjct: 149 AAAVTRAVRENTQKPVIVK----LSPNVTDITEMARAVVDAGADALALINTLLGMDIDIC 204 Query: 183 ----------GVRNGYDLE-----QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 G +G ++ + +V HVP++ GG + + AF A Sbjct: 205 TRRPVLANIFGGLSGPAIKPVALRMIYQVYRAVHVPILGMGGIMNSQDAI-AFMLAGATA 263 Query: 228 ALAASVFHKQI----INIGELKAYLATQGVE 254 + + ++ Y +GV Sbjct: 264 IAVGTANFTNPRATMDILEGIEEYCCREGVR 294 >UniRef50_B9Y4T3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T3_9FIRM Length = 242 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 70/261 (26%), Gaps = 60/261 (22%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEE---GADELVFYDITASSDGRVVDKSWVSR 68 +R G VV F G +AK GA + R + Sbjct: 11 LRGGLVVSCQAFDYEPFYG-AEMMAKMAVSAKLGGAAAI-----------RASWPENIRA 58 Query: 69 VAEVIDIPFCVAGGIK--------------SLEDAAKILSFGADKISINSPA--LADPTL 112 + + +D+P I +L A + GAD ++++ P + Sbjct: 59 IKKEVDLPIFGINKIMPEVYDKFRDVIITPTLTSARAVAEAGADIVAVDCTLRQGRTPEM 118 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 I L + + V+ + T + + GA Sbjct: 119 IQTLLQEYKAELDVMIMAE-------------------------ISTAEEGRIAASGGAD 153 Query: 173 EIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 + + D ++++ E +P+ A G E ++AF+ Sbjct: 154 ILSTTIAGYTPYSRQLDEPDYRLIEELVETTTLPINAEGRFHRPEQVVQAFK-TGAWTVT 212 Query: 230 AASVFHKQIINIGELKAYLAT 250 S + E + Sbjct: 213 VGSAITRPHCITQEFIRAIHQ 233 Score = 40.2 bits (93), Expect = 0.073, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 24/96 (25%), Gaps = 3/96 (3%) Query: 32 IVPLAKRYAEEGADEL--VFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 + A GAD L T S D + + E +P G E Sbjct: 140 TAEEGRIAASGGADILSTTIAGYTPYSRQLDEPDYRLIEELVETTTLPINAEGRFHRPEQ 199 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 + GA +++ S + Sbjct: 200 VVQAFKTGAWTVTVGSAITRPHCITQEFIRAIHQFK 235 >UniRef50_Q6K306 cDNA clone:001-026-D08, full insert sequence n=14 Tax=Poaceae RepID=Q6K306_ORYSJ Length = 385 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 63/201 (31%), Gaps = 30/201 (14%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + V +A+ Y + GA L G + V + P + + Sbjct: 182 NPVEIAQSYEKNGAACLSILTDEKHFQGSFENLETVRN--SGVKCPLLCKEFVIDIWQIY 239 Query: 91 KILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 S GAD I + + L D + + R+ G+ ++ D K Q G Sbjct: 240 YARSKGADAILLIAAVLPDLDIKYMLRICKNLGMTALIEVHDERELDRVLKIDGVQLIGI 299 Query: 149 ESRTRVTQ-WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 +R+ T +T + ++KRG + ++ + ++ Sbjct: 300 NNRSLETFKVDTSNTKTLLEKRG--------------------DLIRD----KGILVVGE 335 Query: 208 GGAGTMEHFLEAFRDADVDGA 228 G T + ++A V Sbjct: 336 SGLFTPDDV-AYVQNAGVSAV 355 >UniRef50_A8MJK5 Dihydroorotate dehydrogenase family protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJK5_ALKOO Length = 372 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 21/100 (21%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDG---------------------RVVDKSWVSRV 69 ++V LA+ + GA + D S G R + + ++ + Sbjct: 167 NVVKLARAAEKAGASAISGIDTVRSIAGVDIEKGRVLLPTFGGYSGDAIRPIGLAAIASI 226 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 A+ IP C GGI + E + + GA + + + + + Sbjct: 227 AQATSIPICGIGGITNYEHILEYMMLGASTVQVCTSIILN 266 Score = 41.0 bits (95), Expect = 0.040, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 41/174 (23%), Gaps = 37/174 (21%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A K+ FGAD + + L V+ + T Sbjct: 109 AQKVEQFGADAVELGVSCPHGEGLEG-----------VISEPSKLYEFTKAVVDRIKIPV 157 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE----------------- 191 + + + +K GA I ++ G D+E Sbjct: 158 MVKLSSNTVNVVKLARAAEKAGASAIS--GIDTVRSIAGVDIEKGRVLLPTFGGYSGDAI 215 Query: 192 ------QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + + + +P+ GG EH LE + Sbjct: 216 RPIGLAAIASIAQATSIPICGIGGITNYEHILEYMM-LGASTVQVCTSIILNGY 268 >UniRef50_B1YLS2 Indole-3-glycerol phosphate synthase n=77 Tax=Bacillales RepID=TRPC_EXIS2 Length = 258 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 71/223 (31%), Gaps = 37/223 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V AKRYAE GA + +T + + + + V + +D+P + Sbjct: 65 DPVAQAKRYAESGATVISV--LTDQTYFKGSMEDL-AAVTKAVDVPVLCKDFMIDRIQID 121 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GA I + AL D TL A + V+ Sbjct: 122 LAKAHGASLILLIVAALDDETLEDLYAYAYASGLEVLVEVH------------------- 162 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMN--QDGVRNGYDLEQLKKVREVCHVPLIASG 208 + L+ + ++ A + +N N + V LE LK + V I+ Sbjct: 163 -------DALEL-KRAERLQAKILGINNRNLKKFEVSLDTSLELLKT--KSPGVRYISES 212 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFH--KQIINIGELKAYLA 249 G T+ + A DG L + + E + Sbjct: 213 GIKTVAEA-QMLHAAGADGILIGETLMRAENPADFIEAVNGVK 254 >UniRef50_Q1PZY3 Similar to NADH oxidase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZY3_9BACT Length = 659 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 34/131 (25%), Gaps = 10/131 (7%) Query: 34 PLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVIDIPFCVAGGIK 84 +AK GA + +S + +++IP G I+ Sbjct: 257 EIAKILERAGASAIHVSACNYASAFFNIPCYYLEEGCFIHLAEGIKAIVNIPVLSVGRIQ 316 Query: 85 SLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 A ++L AD I + +ADP ++ + V + Sbjct: 317 DPAMAEEVLKENKADLIVLGRSLIADPCWPNKVKEGNLDDIQVCLSCNRCIESISDKKLI 376 Query: 144 QYTGDESRTRV 154 Sbjct: 377 CTVNPYIGKDE 387 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/180 (10%), Positives = 51/180 (28%), Gaps = 22/180 (12%) Query: 89 AAKILSFGADKISINSPALA-------------DPTLITRLADRFGVQCIVVGIDTWYDA 135 A + L G D + I+ + R +V Sbjct: 172 AERALKAGFDGVEIHMAHGYLVNQFFSAESNTRTDDYGGDTSRRARFGREIVEEIRKKVP 231 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD---------GVRN 186 + + T + E+ + + +++ GA I ++ N + Sbjct: 232 ADYPVICRISADEYTETGLKLEESKEIAKILERAGASAIHVSACNYASAFFNIPCYYLEE 291 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G + + ++ + ++P+++ G E ++ D + ++K Sbjct: 292 GCFIHLAEGIKAIVNIPVLSVGRIQDPAMAEEVLKENKADLIVLGRSLIADPCWPNKVKE 351 >UniRef50_C4QXV9 Dihydrouridine synthase, member of a family of dihydrouridine synthases n=1 Tax=Pichia pastoris GS115 RepID=C4QXV9_PICPG Length = 366 Score = 59.1 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 5/161 (3%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AAKI+ I +N+ ++ + + ++ + Sbjct: 102 AAKIVVNDVSGIDVNAGCPKHFSIHSGMGAALLSTPALLEEILTRLVTEVGRPNGKPISV 161 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL-EQLKKVREVC---HVPL 204 + R + +TL+ V+ + K G + ++ ++ + + L+ + + C V L Sbjct: 162 KIRVLENEQKTLELVERLVKTGISNLTVHCRTKNMRNREAPIRDYLEGILDHCRSNKVSL 221 Query: 205 IASGGAGTMEHFLEAFRDADVD-GALAASVFHKQIINIGEL 244 + +GG F+ +D GA+ AS ++ Sbjct: 222 VINGGIKDRNDFIAIQEKYGMDVGAMVASEAELNPTCFRKV 262 Score = 42.9 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 35/105 (33%), Gaps = 9/105 (8%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD----KSWVSRVAEVI 73 VK N + + L +R + G L + T + R + Sbjct: 161 VKIRVLENEQ---KTLELVERLVKTGISNLTVHCRTKNMRNREAPIRDYLEGILDHCRSN 217 Query: 74 DIPFCVAGGIKSLEDAAKILS-FGAD-KISINSPALADPTLITRL 116 + + GGIK D I +G D + S A +PT ++ Sbjct: 218 KVSLVINGGIKDRNDFIAIQEKYGMDVGAMVASEAELNPTCFRKV 262 >UniRef50_A5ULU9 tRNA-dihydrouridine synthase n=2 Tax=Methanobrevibacter smithii RepID=A5ULU9_METS3 Length = 236 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 4/89 (4%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPFC 78 V+ R + D + +AK GAD L A G D ++++ +I Sbjct: 140 SVKIRANVDGIDTLKIAKLIENTGADYLHI---DAMKVGIFDADYDLLAKICSNTNIKVI 196 Query: 79 VAGGIKSLEDAAKILSFGADKISINSPAL 107 I S + K+L G SI + Sbjct: 197 GNNSIDSEQKIEKMLKTGVFGFSIARAVI 225 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 56/190 (29%), Gaps = 25/190 (13%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + + + V P I +L D + IN D Sbjct: 65 IKKQHPNVKVSANVRSTTPRPIIEVSNIDNL-----------DIVEINCHCRQD-----E 108 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + Q ++ D + + + R V +TL + ++ GA + Sbjct: 109 ILAIGCGQNMLKRDDLAEYIGDVVDNASCEVSVKIRANVDGIDTLKIAKLIENTGADYLH 168 Query: 176 LNMMNQDGVRNG---YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + D ++ G D + L K+ ++ +I + + + + + V G A Sbjct: 169 I-----DAMKVGIFDADYDLLAKICSNTNIKVIGNNSIDSEQKIEKMLK-TGVFGFSIAR 222 Query: 233 VFHKQIINIG 242 +N Sbjct: 223 AVISGKLNFN 232 >UniRef50_C9LSI3 Indole-3-glycerol phosphate synthase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSI3_9FIRM Length = 266 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 67/219 (30%), Gaps = 37/219 (16%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA+ YAE GA L + G ++ V V ++D+P I + Sbjct: 74 ELARIYAENGASMLSVHT-DPHFLG--SNEDLVR-VRSLVDLPLLRKDFIIDEYQIFEAR 129 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GAD + + + L+ L + + + V+ Sbjct: 130 MLGADAVLLIARILSPAQLREYVFRAWEIGLDVLVEVHDEADM----------------- 172 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY--DLEQLKKVREVCHVPLIASGGAG 211 ++ A I +N N LE L KV E I+ G Sbjct: 173 ----------KDALATPAEFIGINNRNLQTFTTSIKNTLELLPKVEESRT--FISESGIF 220 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 ++ ++A G L + ++ E+ +LA Sbjct: 221 SVADARR-LQEAGCGGILVGEGLV-RADDVAEMTRHLAE 257 >UniRef50_A2R578 Contig An15c0120, complete genome n=29 Tax=Leotiomyceta RepID=A2R578_ASPNC Length = 340 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 61/211 (28%), Gaps = 28/211 (13%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVDKSWVS---------RVAEVIDIPFCVAG--GIK 84 A+ E G + ++ + D +++ + V IP V G G Sbjct: 71 ARLIEEAGFPMIFISGFAVAASHGLPDTGYIAMGEMSARIQEIVRVTSIPIMVDGDTGYG 130 Query: 85 SLEDAAKILS----FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 S + + + GA + I T+ + DA Sbjct: 131 SPMNVRRTVECFAAAGAAGVMIEDQTWPKRCGHTKGKSVVSRGEAYARVQAAVDARNQGR 190 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC 200 + E + +E ++ GA + + + D E ++K E Sbjct: 191 DI-FILARTDSLIHGWDEAMTRAKEFKRIGADGVFVEAL--------PDREAMRKCAEEL 241 Query: 201 HVPLIAS---GGAGTMEHFLEAFRDADVDGA 228 +PL+A+ GG + + + Sbjct: 242 DIPLLANIIEGG-KSENLSAKELAELGFAAV 271 >UniRef50_C6A1L2 Dihydroorotate dehydrogenase family protein n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A1L2_THESM Length = 309 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 21/111 (18%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDI------------------TASSDG---RVVDKSWV 66 + DIV +AK + GAD L + T G + + + V Sbjct: 169 DVTDIVEIAKTAVDAGADGLTIGNGAQAMRIDVETGLPILKLKTGGLGGPAVKPITLAKV 228 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + E +D+P GGI + +DA + GA + + + + DP R+ Sbjct: 229 FKTREALDVPIIGIGGIMNWQDAIEYAMAGASLLGLGTAVMVDPEAPVRII 279 >UniRef50_B1MZ73 Dihydroorotate dehydrogenase B, catalytic subunit n=1 Tax=Leuconostoc citreum KM20 RepID=B1MZ73_LEUCK Length = 306 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 21/114 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVS 67 + DI P+ K GAD +V + T G + +V Sbjct: 173 VTDIKPIVKAVETAGADGIVLINTVVGMSLDLNTRQARLARGTGGMSGTSVHPIAVRFVY 232 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 A+ + IP GG+ +++D +++ GA + I + + ++ + Sbjct: 233 ETAQTVSIPVIGVGGVSTVDDVLELMMAGASAVQIGTALAGNHQVMADIIRELP 286 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 6/71 (8%) Query: 183 GVRNGYDLEQLK-----KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 G +G + + + + +P+I GG T++ LE A + Sbjct: 216 GGMSGTSVHPIAVRFVYETAQTVSIPVIGVGGVSTVDDVLELMM-AGASAVQIGTALAGN 274 Query: 238 IINIGELKAYL 248 + ++ L Sbjct: 275 HQVMADIIREL 285 >UniRef50_B1JA40 2-nitropropane dioxygenase NPD n=11 Tax=Proteobacteria RepID=B1JA40_PSEPW Length = 358 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 29/104 (27%), Gaps = 11/104 (10%) Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----------DLEQLK 194 ++ T++ ++ G I+ G R + + Sbjct: 148 RVKASGAKVLSSATTVEEALWLEANGCDAIIAMGFEAGGHRGMFLSEDINSQIGTFALVP 207 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +V + +P+IA+GG + A + + Sbjct: 208 QVADAVDLPVIAAGGIADHRGLVAAL-ALGASAVQIGTAYLFCP 250 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 10/98 (10%) Query: 32 IVPLAKRYAEEGADELVFYD----------ITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 V A G D ++ ++ + ++ + V +VA+ +D+P AG Sbjct: 162 TVEEALWLEANGCDAIIAMGFEAGGHRGMFLSEDINSQIGTFALVPQVADAVDLPVIAAG 221 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 GI L+ GA + I + L P A R Sbjct: 222 GIADHRGLVAALALGASAVQIGTAYLFCPQAKVSAAHR 259 >UniRef50_A4XEW5 NADH:flavin oxidoreductase/NADH oxidase n=2 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=A4XEW5_NOVAD Length = 711 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 67/241 (27%), Gaps = 45/241 (18%) Query: 34 PLAKRYAEEGADELVF---YDITASSDGRVVDKSWVS--------RVAEVIDIPFCVAGG 82 AK G D + +D + + + + +V+ IP +G Sbjct: 263 EAAKLVEAAGVDAITITSYHDTSVGKLHSESNIPHLENWNLPATAEIRKVVSIPVIGSGR 322 Query: 83 IKSLEDAAKILSFG-ADKISINSPALADPTLITRL-----------ADRFGVQCIVVGID 130 I ++ A ++ G D +++ LADP L +L + + Sbjct: 323 I-EVDSAESAIAKGETDFVAMGRKLLADPHLPRKLTEGATEKVRPCVYCYTCVSAIYMGQ 381 Query: 131 TWYDAET--------GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 A G+ + ++ + + G + ++ + Sbjct: 382 PTRCAVNAGLGNEFEGEPPMAGANPRRVAVIGGGPGGMESARRLAALGHK---VTLIEKS 438 Query: 183 GVRNGY------DLEQLKKVREVCHVPLIASG-GAGTMEHFL--EAFRDADVDGALAASV 233 G E +++ E + +G + + R D + A+ Sbjct: 439 DRLGGTLRFASLAYEPNERILEWLRREVKEAGIDVR-LSTVATPDLLRSIGADAVIVATG 497 Query: 234 F 234 Sbjct: 498 A 498 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 33/109 (30%), Gaps = 12/109 (11%) Query: 154 VTQWETLDWVQEVQKRGAGEIVL-----------NMMNQDGVRNGYDLEQLKKVREVCHV 202 +T + + V+ G I + + + ++L ++R+V + Sbjct: 256 ITLDMAKEAAKLVEAAGVDAITITSYHDTSVGKLHSESNIPHLENWNLPATAEIRKVVSI 315 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 P+I SG ++ A + D +L + Sbjct: 316 PVIGSGRI-EVDSAESAIAKGETDFVAMGRKLLADPHLPRKLTEGATEK 363 >UniRef50_A7GWT5 NADH oxidase n=7 Tax=delta/epsilon subdivisions RepID=A7GWT5_CAMC5 Length = 343 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 8/107 (7%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDI-------TASSDGRVVDKSWVSRVAEVIDIPFCVA 80 + D V LAK+ E GA + A + + V E ++IP Sbjct: 229 DVADSVRLAKQLEELGAAFIHVSAGGLFESVDDAPKFAPLYQAGYAKAVKEAVNIPVIAV 288 Query: 81 GGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIV 126 G I + +L G D ++ L +P F + ++ Sbjct: 289 GLITRASEGEALLLGGACDLVAYGRELLRNPNFAFSAMSIFKEKELI 335 Score = 42.9 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 32/111 (28%), Gaps = 13/111 (11%) Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD----------LEQLKKVREVCHV 202 +++ +++++ GA I + + G+ D K V+E ++ Sbjct: 227 DWDVADSVRLAKQLEELGAAFIHV---SAGGLFESVDDAPKFAPLYQAGYAKAVKEAVNI 283 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 P+IA G D + + + + Sbjct: 284 PVIAVGLITRASEGEALLLGGACDLVAYGRELLRNPNFAFSAMSIFKEKEL 334 >UniRef50_C1I264 Enoate reductase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I264_9CLOT Length = 623 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 51/165 (30%), Gaps = 13/165 (7%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVF-YDITA-------SSDGRVV-DKSWVSRV 69 ++ G V +AK G L A + + ++ V Sbjct: 208 HLIRGGRELEEG--VKMAKFLENLGVSALHVDIGCHACWQNAIPTIYQEPALHEKYIQAV 265 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVG 128 E + IP G + E A +I+S G AD +++ LADP + + + + Sbjct: 266 KEEVSIPVIGHGKMGYPEVAERIVSKGIADFVALGHYLLADPEWVNNVKENRSEDIVPCI 325 Query: 129 -IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + + V+ + + + V G G Sbjct: 326 GCNECMFSILSGEPVSCGVNPRCGREGEKLSEAEVKKSVLIVGGG 370 >UniRef50_B5WIG7 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Burkholderia sp. H160 RepID=B5WIG7_9BURK Length = 678 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 43/135 (31%), Gaps = 11/135 (8%) Query: 29 IGDIVPLAKRYAEEGADELVF---YDITASS-------DGRVVDKSWVSRVAEVIDIPFC 78 + D+ +A G D L + T+ + RV +P Sbjct: 244 LEDMERIAPHLVAAGVDALHVSLGHGSTSFDKIVEPMSMPEGWRLPYARRVRAAAGVPVI 303 Query: 79 VAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAET 137 G I+ E A + G AD +++ P LADP ++ Q + A + Sbjct: 304 AVGQIRWPETAEVAIRDGDADLVALGRPLLADPEWASKAKRGATDQIRPCTSCNYCVALS 363 Query: 138 GKYHVNQYTGDESRT 152 + + RT Sbjct: 364 AGEYGVIGCAENPRT 378 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 10/100 (10%) Query: 157 WETLDWVQEVQKRGAGEIVL---NMMNQDG-------VRNGYDLEQLKKVREVCHVPLIA 206 + + G + + + + G+ L ++VR VP+IA Sbjct: 245 EDMERIAPHLVAAGVDALHVSLGHGSTSFDKIVEPMSMPEGWRLPYARRVRAAAGVPVIA 304 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G E A RD D D + K Sbjct: 305 VGQIRWPETAEVAIRDGDADLVALGRPLLADPEWASKAKR 344 >UniRef50_A4E8R9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8R9_9ACTN Length = 539 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 48/160 (30%), Gaps = 11/160 (6%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVID 74 + D++ +++R + G D + T G + + + + ++ Sbjct: 121 DGGLTLNDMIYVSRRLEKAGVDMIHVSGGTTIKRGSAIPAAGTQQASHAACSREIKKHVN 180 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR-LADRFGVQCIVVGIDTW 132 IP G I A +++ AD + L D + A +G Sbjct: 181 IPVATVGRINEAWIAEELIEDSAADICMMGRANLCDAEFCNKAAAGNADDIRPCIGCLRC 240 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + ++ + +E + V GAG Sbjct: 241 LNGIMFGKRISCTVNPDVERDEAGYEPAAEAKNVLVVGAG 280 >UniRef50_C0GDK9 Indole-3-glycerol-phosphate synthase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDK9_9FIRM Length = 259 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 60/219 (27%), Gaps = 43/219 (19%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA+ Y GA + +T + V V + +P I + Sbjct: 71 ELARAYESGGARAISV--LTEEDFFKGSATDLVK-VKSAVTLPVLRKDFIIDSYQLYESR 127 Query: 94 SFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + GAD + + + L + L ++ D + +V Sbjct: 128 ALGADAVLLIAGFLPEKELRAYLQICDELDLAAVVETHS--------------------- 166 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP----LIAS 207 D +Q GA + +N N + + ++ +P L++ Sbjct: 167 --------ADEIQMALTAGARIVGINNRN----LQNFTTDVNHTLQLAPQIPDNVLLVSE 214 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G + A D L + +++ Sbjct: 215 SGIESAVDVH-LLGAAGADAVLVGETLVRSANPTAKIRE 252 >UniRef50_A8BQN9 Dihydrouridine synthase, putative n=2 Tax=Giardia intestinalis RepID=A8BQN9_GIALA Length = 555 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 23/184 (12%), Positives = 47/184 (25%), Gaps = 36/184 (19%) Query: 97 ADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 D I +N+ D A ++ +V +D Y V + + Sbjct: 255 CDFIDLNAACPQDIATKKCCGAALAANLKKLVSSVDCMVRG-GEHYGVPVFLKIRAGDLR 313 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV-------------- 199 W Q ++ G + +++ + + + L +R Sbjct: 314 GDWTGDSVAQALRLSGLYGLSVHLRTAKQRYSKLANWDYLVSMRHALDNCEESTAPDLEP 373 Query: 200 ----------CHVPLI-------ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + P+I +G + VD L A + Sbjct: 374 QLKHDISSSTTNRPIIRTPPLLGGNGDIFDYTDLHRD-DHSTVDYYLIARGALVKPWIFQ 432 Query: 243 ELKA 246 E+K Sbjct: 433 EIKE 436 >UniRef50_A5CW14 Indole-3-glycerol phosphate synthase n=3 Tax=Gammaproteobacteria RepID=A5CW14_VESOH Length = 268 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 67/222 (30%), Gaps = 32/222 (14%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + V +A+ Y + GA L T + ++ + V E I IP I Sbjct: 78 NPVEIAESYEKSGATCLSVV--TNKDFFQGNNQHLI-DVCEAISIPILHKEFIIDSYQIY 134 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GAD I + + L D + F +Q I + +D + + Sbjct: 135 ESRTLGADCILLIAACLNDQQIED-----FTMQAININMDVLIEIHNIEELERTLQLRLP 189 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 V + ++ +E +K+++E + I G Sbjct: 190 MIGVNNRNLHTFDVSLE--------------------TTIELMKEIKEDTLI--ITESGI 227 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 T ++ L F + N G+ + + Sbjct: 228 LTSNDV-AFMNKHNIYSFLVGEAFM-RQDNPGKALQKIFGKN 267 >UniRef50_Q9FI41 Emb|CAB87804.1 n=16 Tax=Embryophyta RepID=Q9FI41_ARATH Length = 387 Score = 58.3 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 21/186 (11%), Positives = 53/186 (28%), Gaps = 17/186 (9%) Query: 71 EVIDIPFCVAG-GIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADRFGVQCIVVG 128 + I + G +++L A ++ + A D+I+ N P + R + Sbjct: 64 DQHPIVLQIGGRNLENLAKATRLANAYAYDEINFNCGCP-SPKVSGRGCFGALLMLDPKF 122 Query: 129 IDTWYDAETGKYHVNQYTGDESR--TRVTQWETLDWVQEVQKR-GAGEIVLNMMNQDGVR 185 + + + E D++ V +++ Sbjct: 123 VGEAMSVIAANTNAAVTVKCRIGVDDHDSYNELCDFIHIVSSLSPTKHFIIHSRKALLSG 182 Query: 186 NGY-DLEQL---------KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 D ++ +R+ + +GG ++ A R + G + + Sbjct: 183 LSPSDNRRIPPLKYEFFFALLRDFPDLKFTINGGINSVVEADAALR-SGAHGVMLGRAVY 241 Query: 236 KQIINI 241 +I Sbjct: 242 YNPWHI 247 Score = 41.8 bits (97), Expect = 0.026, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 33/116 (28%), Gaps = 32/116 (27%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVF------------YDITASSDG-RVVDKS 64 VK + + + D + + A G D Sbjct: 140 VKCRIGVDDHDSYNEL----------CDFIHIVSSLSPTKHFIIHSRKALLSGLSPSDNR 189 Query: 65 WV---------SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + + + D+ F + GGI S+ +A L GA + + +P Sbjct: 190 RIPPLKYEFFFALLRDFPDLKFTINGGINSVVEADAALRSGAHGVMLGRAVYYNPW 245 >UniRef50_C3WVD6 NADH oxidase n=2 Tax=Fusobacterium RepID=C3WVD6_9FUSO Length = 316 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 12/125 (9%) Query: 2 LAKRIIPCLDV--RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVF---YDITASS 56 L K II + +D ++ I D + AK + G D L Sbjct: 190 LVKEIIEAIKSFSKDDFIISYRMGWTENINTD-IETAKALEKLGVDILHVSSGIPEDRKL 248 Query: 57 DGRVVDK--SWVS---RVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADP 110 + +V +V + ++IP V IK+L K++ G D ++ P L+DP Sbjct: 249 KLPDEFEYNDFVYTGIQVKKNVNIPVIVVNDIKTLSRGNKLIEDGDCDFVAYGRPFLSDP 308 Query: 111 TLITR 115 I Sbjct: 309 NFIIH 313 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 22/173 (12%), Positives = 52/173 (30%), Gaps = 16/173 (9%) Query: 89 AAKILSFGADKISINSP-----ALADPTLITRLADRFGVQCI--VVGIDTWYDAETGKYH 141 A G D I ++ + + + D +G I + + +A Sbjct: 144 AKFCQEAGLDGIELHGAHTYFFNMLSSEISNKREDNYGGNLIERLNLVKEIIEAIKSFSK 203 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN-MMNQDGVRNGYDLEQLK------ 194 + ++ + ++K G + ++ + +D D + Sbjct: 204 DDFIISYRMGWTENINTDIETAKALEKLGVDILHVSSGIPEDRKLKLPDEFEYNDFVYTG 263 Query: 195 -KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI-INIGELK 245 +V++ ++P+I T+ + D D D F I +K Sbjct: 264 IQVKKNVNIPVIVVNDIKTLSRGNKLIEDGDCDFVAYGRPFLSDPNFIIHSIK 316 >UniRef50_B8HZW6 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=Bacteria RepID=B8HZW6_CLOCE Length = 329 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 12/103 (11%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG--------RVVDKSWVSRVAEVID 74 I D + + + G L DI+ G + + E + Sbjct: 227 MEGGITIEDSLIATGEFEKAGVSAL---DISGGFCGYIKPDAKEQGYFWPLTKAIKEHVS 283 Query: 75 IPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 IP + GGI E A ++L+ G AD I + L D Sbjct: 284 IPVILTGGITDAESAEQLLAGGKADLIGVGRSILKDSGWAAHA 326 Score = 56.4 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 45/166 (27%), Gaps = 18/166 (10%) Query: 88 DAAKILSFGADKISINSPALA-------------DPTLITRLADRFGVQCIVVGIDTWYD 134 A ++ G D + I+S + R + ++ Sbjct: 152 AAERVKKAGFDGVEIHSAHGYLLSQFFSPISNKRSDEYGGNVLSRIKIHLQIINAVKKAV 211 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI-----VLNMMNQDGVRNGYD 189 E + D +T ++L E +K G + + D GY Sbjct: 212 GEDFTVFLRLGASDYMEGGITIEDSLIATGEFEKAGVSALDISGGFCGYIKPDAKEQGYF 271 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 K ++E +P+I +GG E + D Sbjct: 272 WPLTKAIKEHVSIPVILTGGITDAESAEQLLAGGKADLIGVGRSIL 317 >UniRef50_A7EHJ6 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EHJ6_SCLS1 Length = 513 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/168 (10%), Positives = 45/168 (26%), Gaps = 7/168 (4%) Query: 77 FCVAGGIKSLEDA---AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 G E A A++++ I +N+ + + + Sbjct: 191 LIFQIGTSDPEKAVQCARMVAADVAGIDVNAGCPKPFSTSGGMGAALLQTPDKLCAILEA 250 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD---- 189 + + R T T V+++ G + ++ Sbjct: 251 LVKEIVPEFEIGISVKIRLLETPERTEALVRKLCATGITGLTIHCRTTPMRPRERAIRGQ 310 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 L+ + + + + +G + L+ + +GA+ A Sbjct: 311 LKMIADICRESGIACLMNGDVENRDQALKLAEEYGTNGAMIAVAAEAN 358 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 16/121 (13%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-------A 54 L K I+P ++ G VK E L ++ G L + T Sbjct: 251 LVKEIVPEFEI--GISVKIRL---LETPERTEALVRKLCATGITGLTIHCRTTPMRPRER 305 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLI 113 + G+ ++ + I + G +++ + A K+ +G + I A A+ + Sbjct: 306 AIRGQ---LKMIADICRESGIACLMNGDVENRDQALKLAEEYGTNGAMIAVAAEANSSCF 362 Query: 114 T 114 Sbjct: 363 R 363 >UniRef50_B8D5Y6 Geranylgeranylglyceryl phosphate synthase-like protein n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5Y6_DESK1 Length = 248 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 2/93 (2%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 ++ A G L + + + V + ++ V GGI+S + A + Sbjct: 157 VLAYALAAEMMGFKLLYLEAGSGAQSHIPPAFPGI--VKKHTELITMVGGGIRSPDAALE 214 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQC 124 ++ GAD I + DP + Sbjct: 215 LIRAGADIIVTGTIMEKDPERGVNIIKTIKKYR 247 >UniRef50_Q0BTY5 Indole-3-glycerol phosphate synthase n=16 Tax=Alphaproteobacteria RepID=Q0BTY5_GRABC Length = 305 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 27/230 (11%), Positives = 49/230 (21%), Gaps = 35/230 (15%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + LAK Y GA L +T + D + + +P Sbjct: 98 SGGLIRPNFNPAELAKAYQVGGATCLSV--LTDGPYFQG-DPDHLVAARAAVSLPVLRKD 154 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLI--TRLADRFGVQCIVVGIDTWYDAETGK 139 I + + GAD I + AL D A + + D Sbjct: 155 FILDPWQIYESRAMGADCILLIMAALTDDEARELEETARHLDLDVLAEVHDEAELDRALA 214 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 + + + + + ++ Sbjct: 215 LQTGLIGINNRNLKTLKTDLSTTLNIAPLLPPDRFLV----------------------- 251 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 A G T E V L +Q ++ + Sbjct: 252 ------AESGIRTHEDIQR-LAATGVRSFLVGESLMRQQDVTKAVRELIG 294 >UniRef50_Q0B324 Dihydroorotate oxidase B, catalytic subunit n=8 Tax=Proteobacteria RepID=Q0B324_BURCM Length = 325 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 29/66 (43%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + V + + IP GGI+S DA + L GA + + + + DP ++ + D Sbjct: 218 KPIALRLVHQCYRAVSIPVIGCGGIRSAADAIEFLLAGASAVQVGTASFRDPGVMRTIID 277 Query: 119 RFGVQC 124 C Sbjct: 278 GLEQFC 283 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 8/65 (12%), Positives = 18/65 (27%), Gaps = 1/65 (1%) Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 L + + +P+I GG + +E A + + + + Sbjct: 218 KPIALRLVHQCYRAVSIPVIGCGGIRSAADAIEFL-LAGASAVQVGTASFRDPGVMRTII 276 Query: 246 AYLAT 250 L Sbjct: 277 DGLEQ 281 >UniRef50_UPI0001744BDA indole-3-glycerol-phosphate synthase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744BDA Length = 264 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 37/209 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y + GA+ L +T + +++ + + + IP I Sbjct: 70 DYLTIARTYEKGGANALSV--LTDEKYFQGR-LEYMTTIRQEVSIPVLRKDFIIHEVQIH 126 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GAD I + AL PTL L G Q V+ Sbjct: 127 EAVVAGADAILLIVAALDQPTLEHLLEVAHGCQLDVLMEVHD------------------ 168 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPLI--AS 207 + E+++ A ++ + + N++ DL + + E +I + Sbjct: 169 ------------LPELERALATDVRILGINNRNLKSFTVDLATTEALAEEVPDDVILVSE 216 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHK 236 G T++ A + L + Sbjct: 217 SGIKTVDDAAR-LAIAGANALLVGETLMR 244 >UniRef50_C5CHS6 Dihydroorotate dehydrogenase family protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHS6_KOSOT Length = 361 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 19/201 (9%) Query: 64 SWVSRVAEVIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPALAD-PTLITRLADRF 120 ++ + E +P V+ G ++ LE + AD +++ +AD P L+ L Sbjct: 82 EFIPKFREKSSLPLIVSLGYTVEDLEVLVPMFDDLADAFELSTHYVADDPELMKHLIRTV 141 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL----DWVQEVQKRGAGEIVL 176 + + + + + + +L +E++ G Sbjct: 142 KKHTDKPVFLKFDPSVPEPEVMAKAVEEAGGDGIVAINSLGPGYPLYRELKSSPLG---- 197 Query: 177 NMMNQDGVRNGY-----DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA-LA 230 + G +G L +K+V C++P+I GG + + ++ A L Sbjct: 198 -STHGFGWISGPVIKPIALAMVKRVASSCNLPIIGVGGISSADDVIDFIM-AGASAVQLL 255 Query: 231 ASVFHKQIINIGELKAYLATQ 251 + ++ A L + Sbjct: 256 SGALLYGKSIYKKIIADLPKK 276 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 24/108 (22%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYD-------ITASSDG-----------------R 59 + + + +AK E G D +V + + + Sbjct: 152 KFDPSVPEPEVMAKAVEEAGGDGIVAINSLGPGYPLYRELKSSPLGSTHGFGWISGPVIK 211 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 + + V RVA ++P GGI S +D + GA + + S AL Sbjct: 212 PIALAMVKRVASSCNLPIIGVGGISSADDVIDFIMAGASAVQLLSGAL 259 >UniRef50_D1AI07 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=Bacteria RepID=D1AI07_SEBTE Length = 374 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 5/131 (3%) Query: 29 IGDIVPLAKRYAEEGADELVFY--DITAS-SDGRVVDKSWVSRVAEVID--IPFCVAGGI 83 I D + L + + D + DI A S G DKS V + + ++ IP GGI Sbjct: 241 IEDTLVLVENLISKELDYIHISLQDIHAKPSMGSGYDKSMVEMIIDKVNGRIPVIAVGGI 300 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 + ++A KI+ GAD I++ + +P + + + + V D + Sbjct: 301 HTPDEALKIVEDGADMIALGRELIMEPDWVKKAEEDQEDEIAVKMSRGSKDKLVIPDALY 360 Query: 144 QYTGDESRTRV 154 + + Sbjct: 361 KQIENTDGWFP 371 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 53/152 (34%), Gaps = 7/152 (4%) Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV--QK 168 + R+ V V + Y + + + +TL V+ + ++ Sbjct: 196 DIQKRMLFPMKVIDKVKRVAEEYGKKDFIVGYRFSPEEIETPGIRIEDTLVLVENLISKE 255 Query: 169 RGAGEIVLNMMNQDG-VRNGYDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADV 225 I L ++ + +GYD ++ + + + +P+IA GG T + L+ D Sbjct: 256 LDYIHISLQDIHAKPSMGSGYDKSMVEMIIDKVNGRIPVIAVGGIHTPDEALKIVED-GA 314 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D + + + + + +++ Sbjct: 315 DMIALGRELIMEPDWVKKAEED-QEDEIAVKM 345 >UniRef50_B3JG84 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JG84_9BACE Length = 313 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 44/152 (28%), Gaps = 5/152 (3%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + S G +I +N LI G+ + DA + Sbjct: 81 AGFLASKGYREIDVNMGCPF--PLIANRGKGSGILPYPEKVAALLDAMRQLPEIRFSVKM 138 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 E + + G +I L+ G + K+ + C +PL+ + Sbjct: 139 RLGWLHAD-EWKQVLPLLNGSGVSQITLHPRIGKQQYKGEVNRVAFKEFYDSCELPLVYN 197 Query: 208 GGAGTMEHFLEAFRDA-DVDGALAASVFHKQI 238 G T+E E + + G + Sbjct: 198 GDLCTLETVQELLEEYPRLKGVMLGRGLLADP 229 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 9/113 (7%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-V 61 A R +P + VK H + G ++ + + V Sbjct: 125 AMRQLPEI----RFSVKMRLGWLHADEWK--QVLPLLNGSGVSQITLHPRIGKQQYKGEV 178 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD--KISINSPALADPTL 112 ++ + ++P G + +LE ++L + + LADP+L Sbjct: 179 NRVAFKEFYDSCELPLVYNGDLCTLETVQELLEEYPRLKGVMLGRGLLADPSL 231 >UniRef50_C8PVF7 2-nitropropane dioxygenase, NPD n=3 Tax=Proteobacteria RepID=C8PVF7_9GAMM Length = 352 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 40/154 (25%), Gaps = 15/154 (9%) Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 G + I + P + A ++ VV + Sbjct: 100 YQELGLTQDEIATTGGRQPFTHEQAALLADLKVPVVSFHFGLPDKALLN----IVKKSGA 155 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----------DLEQLKKVREVCH 201 ++ T + +Q GA I+ + G R + L + Sbjct: 156 IVISSATTPAEARWLQANGADMIIAQGLEAGGHRGMFLSQDVTLQAGTFSLLPNIIRSVS 215 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +P+IA+GG AF + F Sbjct: 216 LPVIAAGGISDNATAQAAF-AIGASAVQVGTAFL 248 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 11/94 (11%) Query: 32 IVPLAKRYAEEGADELVFYDIT-ASSDG---------RVVDKSWVSRVAEVIDIPFCVAG 81 A+ GAD ++ + G + S + + + +P AG Sbjct: 164 PAE-ARWLQANGADMIIAQGLEAGGHRGMFLSQDVTLQAGTFSLLPNIIRSVSLPVIAAG 222 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITR 115 GI A + GA + + + L T+ Sbjct: 223 GISDNATAQAAFAIGASAVQVGTAFLLADECDTK 256 >UniRef50_Q26HI8 Putative PcrB family protein n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26HI8_9BACT Length = 242 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 39/118 (33%), Gaps = 9/118 (7%) Query: 3 AKRIIPC--LDVRDG-----QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS 55 I+P L + G Q V Q + IV A G + + + Sbjct: 127 KLEIVPTGYLLIDGGHESAVQRVSQTQPLPQNDVDSIVHTAFAGQLMGNQLIYLEAGSGA 186 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 +D + V +DIP V GG++SL+ GAD + I + Sbjct: 187 ITS--IDPEVIKSVKNQLDIPLIVGGGLRSLQQLESSFLAGADMLVIGTAIEQKINWN 242 Score = 41.4 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 G D E +K V+ +PLI GG +++ +F A D + + Sbjct: 185 GAITSIDPEVIKSVKNQLDIPLIVGGGLRSLQQLESSF-LAGADMLVIGTAI 235 >UniRef50_B7GBC4 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GBC4_PHATR Length = 323 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 19/190 (10%), Positives = 52/190 (27%), Gaps = 16/190 (8%) Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSF-------GADKISINSPALADPTLITRLADRF 120 + + P V S++ + + D +N R F Sbjct: 56 ELKPFTNGPLMVQLAGNSVDMVLRAAQYVLDQTDGKVDGFDLNCGCPQGIARKGRYG-AF 114 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 ++ + A + N + R VT + + ++ G + ++ Sbjct: 115 LMEEDTDLVCRILSALRQELPANIAVSAKIRLPVTDEMLVARMPKLLDTGVDFMTIHGRT 174 Query: 181 QDGVRN---GYDLEQLKKV-----REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + G ++++ ++ P++A+GG M +++ Sbjct: 175 LHENKTKVRGVHTDRIRLAIETVHKQRPGFPIVANGGVEHMPDVANLQARTGAVAVMSSE 234 Query: 233 VFHKQIINIG 242 + Sbjct: 235 SLLEFPNIFS 244 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 11/90 (12%) Query: 35 LAKR--YAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVI-----DIPFCVAGGIK 84 +A+ + G D + + T + R V + E + P GG++ Sbjct: 154 VARMPKLLDTGVDFMTIHGRTLHENKTKVRGVHTDRIRLAIETVHKQRPGFPIVANGGVE 213 Query: 85 SLEDAAKI-LSFGADKISINSPALADPTLI 113 + D A + GA + + L P + Sbjct: 214 HMPDVANLQARTGAVAVMSSESLLEFPNIF 243 >UniRef50_A1HS67 Indole-3-glycerol-phosphate synthase n=4 Tax=Veillonellaceae RepID=A1HS67_9FIRM Length = 293 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 61/220 (27%), Gaps = 36/220 (16%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LAK Y GA L + G + D + V V ++P I + + Sbjct: 98 ELAKIYTAHGATALSVLT-DSHFCGALAD---IEAVRAVTELPILRKDFIVDVYQIYEAR 153 Query: 94 SFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + GAD + + + L+D L +A G+ C+V + + + Sbjct: 154 AVGADAVLLIAGILSDGELEEFLTVAHGIGLDCLVEVHNEVELNRVQQTPALLVGINNRN 213 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 + + + + I +I+ G Sbjct: 214 LKTFTVDLMTTFSLLPHCDKRRI-----------------------------IISESGVK 244 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 T E L + A V G L K + + Sbjct: 245 TGEDALR-LKAAGVQGILVGEGLVKAENIAAKTRELALAN 283 >UniRef50_P32382 NADH oxidase n=1 Tax=Thermoanaerobacter brockii RepID=NADO_THEBR Length = 651 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 10/93 (10%) Query: 35 LAKRYAEEGADELVFYD---------ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 +AK E G L + S + + +V++IP G I+ Sbjct: 242 IAKMLEEAGVHVLHVSAGIYESMPTLLEPSRFEQGWRVYLAEEIKKVVNIPVITVGVIRE 301 Query: 86 LEDAAKILSFG-ADKISINSPALADPTLITRLA 117 E A KI++ G AD +++ +ADP + Sbjct: 302 PEFAEKIIAEGRADFVAVGRGLIADPEWPKKAK 334 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 32/102 (31%), Gaps = 9/102 (8%) Query: 154 VTQWETLDWVQEVQKRGAGEIVL---------NMMNQDGVRNGYDLEQLKKVREVCHVPL 204 T E + +++ G + + ++ G+ + +++++V ++P+ Sbjct: 234 NTLEEGKQIAKMLEEAGVHVLHVSAGIYESMPTLLEPSRFEQGWRVYLAEEIKKVVNIPV 293 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 I G E + + D + K Sbjct: 294 ITVGVIREPEFAEKIIAEGRADFVAVGRGLIADPEWPKKAKE 335 >UniRef50_B0C3E9 tRNA-dihydrouridine synthase A n=4 Tax=Bacteria RepID=B0C3E9_ACAM1 Length = 335 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 21/182 (11%), Positives = 45/182 (24%), Gaps = 22/182 (12%) Query: 77 FCVAGGIKSLEDAAKIL----SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 V G + +D A+ +G D+I++N + Q + Sbjct: 69 LQVGGD--NPQDLAECARIATDWGYDEINLNVGCPSSRVQNGHFGACLMAQP--DRVAAC 124 Query: 133 YDAETGKYHVNQYTGDESRTRVT--QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD- 189 +A H+ + +VQ V G ++ Sbjct: 125 VEAMMQATHLPVSVKHRIGIDDCDRYEDMAHFVQTVAASGCQIFSVHARKAWLKGLSPKE 184 Query: 190 --------LEQLKKVREVCHVPLI-ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 E + ++++ I +GG + VD + + Sbjct: 185 NRDIPPLRYEDVYRLKQNFSHLWIEINGGFIQLFQVHNQL--PKVDAVMIGRAAYDNPYL 242 Query: 241 IG 242 Sbjct: 243 FA 244 Score = 40.6 bits (94), Expect = 0.055, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 33/141 (23%), Gaps = 12/141 (8%) Query: 18 VKGVQFRNHEI-IGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVS 67 VK + D+ + A G + A G + V Sbjct: 138 VKHRIGIDDCDRYEDMAHFVQTVAASGCQIFSVHARKAWLKGLSPKENRDIPPLRYEDVY 197 Query: 68 RVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 R+ + + + GG L L D + I A +P L + F + Sbjct: 198 RLKQNFSHLWIEINGGFIQLFQVHNQLPK-VDAVMIGRAAYDNPYLFATVDRDFYHEDRS 256 Query: 127 VGIDTWYDAETGKYHVNQYTG 147 Y Sbjct: 257 APSRHKVAQAMMDYLEEWKIK 277 >UniRef50_C2CLX0 Possible 2-nitropropane dioxygenase n=7 Tax=Corynebacterium RepID=C2CLX0_CORST Length = 330 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 38/137 (27%), Gaps = 17/137 (12%) Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 +L V+ E ++ + T T E ++ + G Sbjct: 100 WTEKLNMALDAGAAVLWSMFGTFTEEEITCIHAAGAEAWTTVTTPAEAVEAARR----GV 155 Query: 172 GEIVLNMMNQDGVRN------GYDLEQLKKVREVCH-------VPLIASGGAGTMEHFLE 218 + + G R D L+++ H +PLIA+GG + Sbjct: 156 DALCVQGPEAGGHRGVWDAEAEPDWRPLEELVFAVHAALGDAPIPLIAAGGMRSSADVER 215 Query: 219 AFRDADVDGALAASVFH 235 A V S F Sbjct: 216 ALAWPGVVAVSCGSAFL 232 Score = 41.8 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 29/105 (27%), Gaps = 15/105 (14%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR------VVDKSWVSRVA 70 + + + G D L A D + + Sbjct: 129 CIHAAGAEAWTTVTTPAEAVEAARR-GVDALCVQGPEAGGHRGVWDAEAEPDWRPLEELV 187 Query: 71 EVI-------DIPFCVAGGIKSLEDAAKILSF-GADKISINSPAL 107 + IP AGG++S D + L++ G +S S L Sbjct: 188 FAVHAALGDAPIPLIAAGGMRSSADVERALAWPGVVAVSCGSAFL 232 >UniRef50_UPI00016A96D1 S-mandelate dehydrogenase (MdlB) n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A96D1 Length = 388 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Query: 36 AKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 A GAD +V + D V ++ VA+ + +P V GI+ ED K L Sbjct: 261 ALACVSAGADAIVVSNHGG-RQIDSCVSPFDVLAEVADAVRVPVLVDSGIRCGEDVLKAL 319 Query: 94 SFGADKISINSPALA 108 + GA + + PA+ Sbjct: 320 AMGASLVLVGRPAIY 334 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 3/76 (3%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 GA IV++ + + + L +V + VP++ G E L+A Sbjct: 261 ALACVSAGADAIVVSNHGGRQIDSCVSPFDVLAEVADAVRVPVLVDSGIRCGEDVLKAL- 319 Query: 222 DADVDGALAAS-VFHK 236 L + Sbjct: 320 AMGASLVLVGRPAIYG 335 >UniRef50_D2LUG6 2,4-dienoyl-CoA reductase (NADPH) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LUG6_BACS4 Length = 649 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 46/153 (30%), Gaps = 20/153 (13%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIV---PLAKRYAEEGADELVFYD---------ITA 54 P + V+ E D+ +++ + G D + I + Sbjct: 217 YPVI-------VRLSVDEFDEDGIDVALSKNISRYLEKIGVDAIHASAGNYNSMEKVIES 269 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLI 113 + + + ++IP G I+ + IL+ G AD ++I +ADP Sbjct: 270 PLYEQGWRVYLAEEIKKEVNIPVITVGSIREPKYVESILAEGKADFVAIGRGHIADPEWT 329 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + + + + G + Sbjct: 330 KKTLEGREKEIRLCISCLHCAYSKGHISCSINV 362 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 60/208 (28%), Gaps = 22/208 (10%) Query: 67 SRVAEVIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRL-----ADRF 120 V E++ A I+ E + GA I+ L T + A+R Sbjct: 142 EEVKELVKKFVTAA--IRCKEAGVDGVELHGAHGYLISQFLNPHTNLRTDMYGGSFANRM 199 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM-- 178 ++ V + + + + + ++K G I + Sbjct: 200 RFLEEIIIGIKEQCGNDYPVIVRLSVDEFDEDGIDVALSKNISRYLEKIGVDAIHASAGN 259 Query: 179 -------MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 + G+ + +++++ ++P+I G ++ + D Sbjct: 260 YNSMEKVIESPLYEQGWRVYLAEEIKKEVNIPVITVGSIREPKYVESILAEGKADFVAIG 319 Query: 232 SVFHKQI-INIGELKAYLATQGVEIRIC 258 K L + EIR+C Sbjct: 320 RGHIADPEWT----KKTLEGREKEIRLC 343 >UniRef50_A3JQL6 2-nitropropane dioxygenase, NPD n=3 Tax=Proteobacteria RepID=A3JQL6_9RHOB Length = 332 Score = 57.9 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 54/207 (26%), Gaps = 22/207 (10%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAEVIDIP 76 V + LA++ ++GAD LV G ++ V D P Sbjct: 123 VHNYGGLVFADVISP-KLARKALDKGADGLVLVCAGAGGHTGEFAMLPFIEEVCSFFDGP 181 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 V GGI + + + G D + + LA + ++ + ++ Sbjct: 182 LIVGGGIGTGRAIRAVENLGVDFAYLGTRFLATKETM--ISQEYR--EMIWQSRMEDLIA 237 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV 196 + + D + V+ + D + + + Sbjct: 238 SRAITGALGNWMRASVEAAGLSLEDMKETVKI---------DFSGDMHQAPRGWKHVWSA 288 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDA 223 + GG E + Sbjct: 289 GQGV-------GGITKPESIADVVAQL 308 >UniRef50_A3HVC3 PcrB-like protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVC3_9SPHI Length = 259 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 27/71 (38%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 S + V + +++ I P + GGI S E + GAD + + + DP + Sbjct: 183 GSGAQKPVSSQVIETLSKAISCPLIIGGGIDSQEKVREAYEAGADLVVLGNSIEKDPDFL 242 Query: 114 TRLADRFGVQC 124 + + Sbjct: 243 AEVLNFKAWYN 253 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 64/215 (29%), Gaps = 19/215 (8%) Query: 40 AEEGADELVFYDITASSDGRVVDKSWVSRVAEVI-DIP-FCVAGGIKSLEDAAKILSFGA 97 E G D ++ S + VS + + IP G L +AA + Sbjct: 46 QESGLDLILI---GGSHLEKNNFDKVVSTIRQHTGKIPIVIFPGSQMQLSEAADAI---- 98 Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 + ++ + +P + + + +V + + T Sbjct: 99 --LFLSLISGRNPEFL--IGQQVAAAPLVNSMGLEVLPTGYLLVNDGEIHSVHAVSQTLP 154 Query: 158 ETLDWVQEVQKRGAGEIVLNMM-----NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGT 212 + V+ L M G + + ++ + + PLI GG + Sbjct: 155 IPNSKSKLVKATALAGYFLGMRYFFLDAGSGAQKPVSSQVIETLSKAISCPLIIGGGIDS 214 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 E EA +A D + + K + E+ + Sbjct: 215 QEKVREA-YEAGADLVVLGNSIEKDPDFLAEVLNF 248 >UniRef50_Q3B2C7 Indole-3-glycerol phosphate synthase n=11 Tax=Chlorobiaceae RepID=TRPC_PELLD Length = 262 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 47/210 (22%), Gaps = 35/210 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A Y E GA L G ++ V+ + +P I Sbjct: 72 DPVRIALHYEEIGASALSVLTDRQFFQGSP---DYLRAVSAAVRLPVLRKDFIVDESQIF 128 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD I + AL L L V+ Sbjct: 129 ESRLMGADAILLIVAALEPRQLRDYLQTASETGLDVLVEVHDRRELD------------- 175 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA--SG 208 + GA I +N N +R IA Sbjct: 176 --------------TAAEEGATMIGVNNRNLKDFSVDPATS--SDLRPFFPPDTIAVSES 219 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQI 238 G T RDA L Sbjct: 220 GLKTAGDI-AHLRDAGFHAVLIGEGLQTSK 248 >UniRef50_C0C2K5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2K5_9CLOT Length = 687 Score = 57.6 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 27/184 (14%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASS--------------DGRVVDKSWVSRV 69 + + V LAK + G D + D++AS + + + V Sbjct: 232 EGGRDLEESVTLAKVLEKNGVDAI---DLSASQPSAYLMTTPPYCLPQAKGMLVPYSESV 288 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITR--------LADRF 120 +DIP A GI+ E A +I++ G AD I++ P LADP + + Sbjct: 289 RRAVDIPVFTAIGIRDPEYAEQIIAEGKADLIALGRPQLADPDYACKVQSGRPETIRHCL 348 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW-ETLDWVQEVQKRGAGEIVLNMM 179 + + +D + S T + + G +V+ Sbjct: 349 SCEYCLDTLDDDRQICCAVNPETGREIEFSGRNATCSGRPSERTGLNEGAGVKRVVVAGG 408 Query: 180 NQDG 183 G Sbjct: 409 GPAG 412 >UniRef50_C6W0Z1 Geranylgeranylglyceryl phosphate synthase n=2 Tax=Flexibacteraceae RepID=C6W0Z1_DYAFD Length = 257 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 2/89 (2%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 A G + + + ++ V +D P V GGI S E A L Sbjct: 165 ALAGEYLGLKNIFLDAGSGAQFPVPA--ETIAAVRGTVDTPIIVGGGIDSYEKADNALRA 222 Query: 96 GADKISINSPALADPTLITRLADRFGVQC 124 GAD I + + A+P L+ +A Sbjct: 223 GADVIVVGNGIEANPELLPEVAACVRAHN 251 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 3/86 (3%) Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + G I L+ + E + VR P+I GG + E A R A D Sbjct: 169 EYLGLKNIFLDAGSGAQFPVPA--ETIAAVRGTVDTPIIVGGGIDSYEKADNALR-AGAD 225 Query: 227 GALAASVFHKQIINIGELKAYLATQG 252 + + + E+ A + Sbjct: 226 VIVVGNGIEANPELLPEVAACVRAHN 251 >UniRef50_Q1QEU5 2-nitropropane dioxygenase, NPD n=3 Tax=Psychrobacter RepID=Q1QEU5_PSYCK Length = 351 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 14/109 (12%) Query: 12 VRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDIT--ASSDGRVVDKS-- 64 + + V+ +Q ++G + AK +AE GAD + + G + Sbjct: 129 IISAEQVQRLQGLGTRVVGTANHPLE-AKAWAEIGADAVCVQGVEAGGHRGGWLPQSEND 187 Query: 65 ------WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 +S+ DIP AGGI + +D + + GA+ I + L Sbjct: 188 PLGLLTLISQTRACNDIPLIAAGGIMNGQDIKAVQTAGAELAQIGTAFL 236 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 11/84 (13%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG--YDLE--------QLKKVREVCHVPLIASGGAGT 212 + + GA + + + G R G E + + R +PLIA+GG Sbjct: 155 AKAWAEIGADAVCVQGVEAGGHRGGWLPQSENDPLGLLTLISQTRACNDIPLIAAGGIMN 214 Query: 213 MEHFLEAFRDADVDGALAASVFHK 236 + +A + A + A + F Sbjct: 215 GQDI-KAVQTAGAELAQIGTAFLT 237 >UniRef50_B9Y4V9 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4V9_9FIRM Length = 291 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 73/215 (33%), Gaps = 12/215 (5%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLEDAAKIL 93 + + + A ++ + S+V IPF + ++L+D + + Sbjct: 33 VVEEAEAQKAPTIIAIAVNELDFCGPEFYSYVRTRLLESPIPFVLHLDHGRTLQDILRAI 92 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 G + + L I + + +V G + + G + Sbjct: 93 QAGFTSVMFDGSELPYEENIRQTKAVVDLAHLVGVSVEGEVGTIGIMNYSDEGGVDH--- 149 Query: 154 VTQWETLDWVQEVQKRGAGEIVL-----NMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 +T + V K G +V+ + + +G L+ L+++++V VPL+ G Sbjct: 150 ITYTRPEEVVDFTAKTGVDSLVVAIGTSHGLYPEGFVPKLQLDLLRELKQVSPVPLVLHG 209 Query: 209 GAGTMEHFLEAFRDADVDGALAAS---VFHKQIIN 240 G+ + + + AS + + +N Sbjct: 210 GSDNPDEEIRQACQIGIRKVNIASDYKAAYSRKLN 244 >UniRef50_B9ML92 Ketose-bisphosphate aldolase n=2 Tax=Clostridiales RepID=B9ML92_ANATD Length = 281 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 24/197 (12%), Positives = 69/197 (35%), Gaps = 8/197 (4%) Query: 63 KSWVSRVAEVIDIPFCVAGG-IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 S V +++ +++P + K+ E+ K + G + + +L + + + Sbjct: 62 YSLVKVMSKNVEVPVVLHLDHCKTFENIVKAIRAGFTSVMFDGSSLPFKENVEKTKEVVK 121 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V + ++ + + + V+ + +++ Sbjct: 122 IAHAVGVSVEAEL--GSIAGGEGSSESDNEETTIYTDPKEAEEFVELTQVDALAVSIGTV 179 Query: 182 DGVRNG---YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 G+ G +++ LK++ +PL+ GG+GT E L+ + + I Sbjct: 180 HGLYTGEPKINIDILKEIASRVQIPLVLHGGSGTPEEILKECIRNGIAKININTEI--SI 237 Query: 239 INIGELKAYLATQGVEI 255 + ++ L ++ Sbjct: 238 YTLDKIAEILNENKNKV 254 Score = 42.5 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 10/89 (11%) Query: 24 RNHEIIGDIVPLAKRYAEEGADEL-----VFYDI-TASSDGRVVDKSWVSRVAEVIDIPF 77 I D + D L + + T ++ + +A + IP Sbjct: 149 EETTIYTDPKEAEEFVELTQVDALAVSIGTVHGLYTGE---PKINIDILKEIASRVQIPL 205 Query: 78 CVAGGIKSLEDA-AKILSFGADKISINSP 105 + GG + E+ + + G KI+IN+ Sbjct: 206 VLHGGSGTPEEILKECIRNGIAKININTE 234 >UniRef50_B1ATU6 Dihydrouridine synthase 1-like (S. cerevisiae) (Fragment) n=33 Tax=Fungi/Metazoa group RepID=B1ATU6_MOUSE Length = 194 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 36/120 (30%), Gaps = 7/120 (5%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA + D I +N +G ++ Sbjct: 79 QAALLAQDYCDAIDLNLGCPQMIAKRGH----YGAFLQEEWDLLQRMILLAHERLSVPVT 134 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPL 204 + R +T+ + Q ++K G + ++ ++ E +K VR+ +P+ Sbjct: 135 CKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAGTASWEHIKAVRKAVGIPV 194 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 20/78 (25%), Gaps = 22/78 (28%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---R 59 R+ P +D V A+ + G L + T G Sbjct: 136 KIRVFPEID-------------------KTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAG 176 Query: 60 VVDKSWVSRVAEVIDIPF 77 + V + + IP Sbjct: 177 TASWEHIKAVRKAVGIPV 194 >UniRef50_D1VVG5 Putative enoyl-(Acyl-carrier-protein) reductase II n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVG5_9FIRM Length = 310 Score = 57.2 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 36/120 (30%), Gaps = 2/120 (1%) Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 D I GI + + ++ + ++K GA I++ Sbjct: 75 IDALVDIVISQGIKFLTTGAGNPGKYMKRFKENKIKVFPIVSSIALAKRMEKLGADGIIV 134 Query: 177 NMMNQDGVRNGYDLE-QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 G L +V + ++P++A+GG G+ A G + Sbjct: 135 EGEEAAGHIGDISTMVLLPQVAQAVNIPVVAAGGIGSGRQIFAA-EVLGASGIQFGTSLL 193 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%) Query: 33 VPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + LAKR + GAD ++ A+ G + + +VA+ ++IP AGGI S Sbjct: 118 IALAKRMEKLGADGIIVEGEEAAGHIGDISTMVLLPQVAQAVNIPVVAAGGIGSGRQIFA 177 Query: 92 ILSFGADKISINSPALADPTLITR 115 GA I + LA Sbjct: 178 AEVLGASGIQFGTSLLATFECPIH 201 >UniRef50_O19904 Uncharacterized protein ycf23 n=1 Tax=Cyanidium caldarium RepID=YCF23_CYACA Length = 249 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 70/233 (30%), Gaps = 34/233 (14%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 LD+ + + +K + + ++ +A+ + D V V Sbjct: 9 LDIANKKAIKVISGLTNLNYEHVLTIARASQRACVSYIDIA----------ADPQLVKVV 58 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 ++IP CV+G ++ + GAD I + + + + V I+ + Sbjct: 59 KANVNIPICVSG--LEIQPIYNAVLAGADLIEVG-----NYESLYKRNTVLSVCKIITLV 111 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 + + Q + ++ ++++ I + +N Sbjct: 112 EEIKKLC-----PRVPLTVTIPYILNQKDQINLCKQLESLRVDYIQTEGNSISKCKNHCV 166 Query: 190 LEQLK----------KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + L+ ++ + +P+I S G + + G Sbjct: 167 QDLLRLSLQTLACTYELVKHTQLPIICSSGLSDVT--VPLAFSLGASGIGIGK 217 >UniRef50_C0QU30 Dihydroorotate dehydrogenase, catalytic subunit (Dihydroorotate oxidase) (Dhodehase) (Dhodase) (Dhod) n=3 Tax=Hydrogenothermaceae RepID=C0QU30_PERMH Length = 320 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 23/139 (16%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------------------ITASSDGR---VVDKSWVS 67 I DI+ A E GAD LV + T G V + Sbjct: 179 ITDILDTATASVEAGADGLVLINTLLGMAIDIDKEEPIIGMRTGGLSGPAILPVAVRMIY 238 Query: 68 RVAEV--IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 +V E +P GGI + +DA + + GA + I + DP ++ Sbjct: 239 QVYEKYGSSVPIIGVGGITTAQDALQHILAGAVSVQIGTANFYDPYSPLKVIKGLKEHLD 298 Query: 126 VVGIDTWYDAETGKYHVNQ 144 G D + + + Sbjct: 299 KKGYDHFLQLVGKAHKIKI 317 Score = 42.5 bits (99), Expect = 0.013, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 28/128 (21%) Query: 154 VTQWETLDWVQEVQKRGAGEIVL------NMMN----------QDGVRNGYDL-----EQ 192 + LD + GA +VL ++ + G +G + Sbjct: 177 PNITDILDTATASVEAGADGLVLINTLLGMAIDIDKEEPIIGMRTGGLSGPAILPVAVRM 236 Query: 193 LKKVREV--CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN----IGELKA 246 + +V E VP+I GG T + L+ A + + I LK Sbjct: 237 IYQVYEKYGSSVPIIGVGGITTAQDALQHI-LAGAVSVQIGTANFYDPYSPLKVIKGLKE 295 Query: 247 YLATQGVE 254 +L +G + Sbjct: 296 HLDKKGYD 303 >UniRef50_C9SVG4 5-proFAR isomerase n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SVG4_VERA1 Length = 208 Score = 57.2 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 46/123 (37%), Gaps = 8/123 (6%) Query: 136 ETGKYHVNQYTGDESRTRVTQWET-LDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + + +T E + +++++ E +++ + +G++ G D ++ Sbjct: 84 CRRRGDDRWFVAMNKWQTITDMEVNAESIRQLEPY-CSEFLIHAADNEGLQKGVDKTLVQ 142 Query: 195 KVREVCHVPLIASGGAGTME--HFLEAFRDADVDGALAASVFH---KQIINIGELKAYLA 249 ++ E +P+ +GG +E ++ D VD S + + E + Sbjct: 143 RLAEWASIPVTYAGGGRHLEDLDAVKRLSDGKVD-LTIGSALDCFGGNGVKLEECVQWNR 201 Query: 250 TQG 252 Q Sbjct: 202 QQP 204 >UniRef50_C4V1R4 N-acylglucosamine-6-phosphate 2-epimerase n=4 Tax=Bacteria RepID=C4V1R4_9FIRM Length = 223 Score = 56.8 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 62/210 (29%), Gaps = 43/210 (20%) Query: 35 LAKRYAEEGADEL---VFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 +A+ E GA + DI ++ + + +I ++ +A Sbjct: 32 MARAAKEGGAVGIRAQSVADIDEIRAVTQLPVIGLIKQTYADSEIYITA-----TMREAE 86 Query: 91 KILSFGADKI---SINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 ++ G + I N + +A +V+ Sbjct: 87 ALIGTGCEMIALDMTNRERPQGTDVRDLIARIHAAHRLVLAD------------------ 128 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPL 204 T + + + GA + M G D ++++ + VP+ Sbjct: 129 ---------ISTYEEGMKAAELGADAVSTTMSGYTPYSPQIAGPDFALMRRLAKDAPVPV 179 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVF 234 A G T E +EA + V GA+ S Sbjct: 180 FAEGRINTPEELVEAMQ-TGVFGAIVGSAI 208 >UniRef50_Q6SH52 Oxidoreductase, FAD/FMN-binding n=2 Tax=Bacteria RepID=Q6SH52_9BACT Length = 409 Score = 56.8 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 47/194 (24%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD-------------- 51 ++ ++V DG+ R + D + AK GAD LV Sbjct: 218 VLAKINVSDGR-------RRGANVEDAIVTAKLLEAAGADMLVLSGGRNVESGWFMFGSN 270 Query: 52 --------------ITASSDGRVV------------DKSWVSRVAEVIDIPFCVAGGIKS 85 ++ + G + ++ E + +P GG+KS Sbjct: 271 MNLEAMYRVLGKWSLSGMAIGATAKSAPSIDFRELYFWEYSKKIREAVSLPLTYLGGVKS 330 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 ++ A+ ++ G + +++ L +P L+ + + ++ Sbjct: 331 ADNVAQCMAAGFEAVALARALLREPDLVNKWQVHPEEPSLCDNCNSCVAYIYHPAGTWCI 390 Query: 146 TGDESRTRVTQWET 159 + Q Sbjct: 391 HRPANVLEDNQLLA 404 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 71/274 (25%), Gaps = 76/274 (27%) Query: 8 PCLDVRDGQVVKGVQFRNHEI----IGDIVPLAKRYAEEGADELVFYDITA--------- 54 P +R + + + D V A+ G D + + Sbjct: 125 PAGLLRGNV---LRRGMTEDDMQNMVDDFVTAAEHCVSAGFDAVEIHMGHGYLLNQFLSP 181 Query: 55 -------SSDGRVVDKS-----WVSRVAEVI--DIPFCVAGGIKS-------LEDA---A 90 + G +++ ++ V + + DI + +EDA A Sbjct: 182 MDNKRKDAYGGSAENRARFPTRVLAAVKQRVGQDIAVLAKINVSDGRRRGANVEDAIVTA 241 Query: 91 KILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 K+L GAD + ++ G Sbjct: 242 KLLEAAGADMLVLSGG-------------------------------RNVESGWFMFGSN 270 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGG 209 W GA ++ R Y E KK+RE +PL GG Sbjct: 271 MNLEAMYRVLGKWSLSGMAIGATAKSAPSID---FRELYFWEYSKKIREAVSLPLTYLGG 327 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + ++ + A + A ++ + + Sbjct: 328 VKSADNVAQCM-AAGFEAVALARALLREPDLVNK 360 >UniRef50_B4YSU4 BaiH n=2 Tax=Clostridium hylemonae RepID=B4YSU4_9CLOT Length = 672 Score = 56.8 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 11/107 (10%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDIT---ASSDGRVVDKSWV-------SRVAEVI 73 + D++ LA ++ G D L T + + + +V+ Sbjct: 241 EGGNSLEDMLYLAPKFEAAGVDLLEVSGGTQYEGLEYTIPSQGKRIGMNIYEAAEIKKVV 300 Query: 74 DIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADR 119 IP G I + AA I+ G D +++ P LADP L + + Sbjct: 301 GIPVYAVGKINDIRYAADIVERGIVDGVAVGRPLLADPDLCKKAKEN 347 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 13/103 (12%), Positives = 34/103 (33%), Gaps = 10/103 (9%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNM----------MNQDGVRNGYDLEQLKKVREVCHVP 203 + + L + + G + ++ + G R G ++ + ++++V +P Sbjct: 244 NSLEDMLYLAPKFEAAGVDLLEVSGGTQYEGLEYTIPSQGKRIGMNIYEAAEIKKVVGIP 303 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + A G + + + VDG + K Sbjct: 304 VYAVGKINDIRYAADIVERGIVDGVAVGRPLLADPDLCKKAKE 346 >UniRef50_C3RHP7 NADH:flavin oxidoreductase n=5 Tax=Bacteria RepID=C3RHP7_9MOLU Length = 646 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 55/169 (32%), Gaps = 17/169 (10%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV---------- 61 + + V G + L + E G D + + + +S G Sbjct: 222 LSGNEYVHGGRTEAETY-----ELCTIFEELGFDGIHISNGSYASPGNRAVIAPMFTEHA 276 Query: 62 -DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADR 119 + ++V +++D+P V I + A +++ AD I + +L DP L + Sbjct: 277 LNMEISAQVKKLVDLPVIVTNRINDPQMADTLINMDKADFIGMGRGSLTDPDLPNKAKAE 336 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + ++ R ++D V++ +K Sbjct: 337 KYGNIKMCIGCLQGCEMPLFFNQEVTCLVNPRVGREYENSMDIVEKAKK 385 Score = 40.2 bits (93), Expect = 0.064, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 49/183 (26%), Gaps = 24/183 (13%) Query: 88 DAAKILSFGADKISINSPA------LADPTLITRL-------ADRFGVQCIVVGIDTWYD 134 A + G D I ++ P + R+ +R + + Sbjct: 153 AAKRAKEAGFDGIELHCAHGYLLAEFLSPFVNKRVDNYGGCLQNRVRIVAEIYLEMRKQV 212 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY------ 188 + V + T+ ET + ++ G I ++ + N Sbjct: 213 GDDFPIIVRLSGNEYVHGGRTEAETYELCTIFEELGFDGIHISNGSYASPGNRAVIAPMF 272 Query: 189 -----DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 ++E +V+++ +P+I + + D + Sbjct: 273 TEHALNMEISAQVKKLVDLPVIVTNRINDPQMADTLINMDKADFIGMGRGSLTDPDLPNK 332 Query: 244 LKA 246 KA Sbjct: 333 AKA 335 >UniRef50_Q1J585 Enoyl-reductase (NADH) n=1 Tax=Streptococcus pyogenes MGAS10750 RepID=Q1J585_STRPF Length = 208 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%) Query: 33 VPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V LAKR + G D ++ + G++ S V +V E + IP AGGI AA Sbjct: 5 VALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMSLVRQVVEAVSIPVIAAGGIADGHGAAA 64 Query: 92 ILSFGADKISINSPALADPTLITR 115 GA+ + I + + Sbjct: 65 AFMLGAEAVQIGTRFVVAKESNAH 88 Score = 52.9 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVREVCHVPLIASGGAGTME 214 + ++ + ++K G ++ M G + +++V E +P+IA+GG Sbjct: 1 MFPSVALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMSLVRQVVEAVSIPVIAAGGIADGH 60 Query: 215 HFLEAFRDADVDGALAAS 232 AF + + Sbjct: 61 GAAAAFM-LGAEAVQIGT 77 >UniRef50_B0TFP7 Indole-3-glycerol phosphate synthase n=2 Tax=Heliobacteriaceae RepID=B0TFP7_HELMI Length = 288 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 48/203 (23%), Gaps = 25/203 (12%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA RY + GA + +T + E + +P + A+ Sbjct: 87 DLAARYEQAGASAISI--LTEEKYFLGC-LDDLQEAKEQVSLPVMRKDFLIDPYQIAEAR 143 Query: 94 SFGADKISINSPALA--DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 GAD + + L + A FG+ ++ A + Sbjct: 144 LCGADACLLIAAMLGPSRLDEMCAAALEFGIHTLIEVHGEEDLAWAAEAVEKNRAQRPGW 203 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 V + + Q E + KV E G G Sbjct: 204 LPVVGINARNLATLKVDK----------EQALRLGAALPEGVVKVAES---------GIG 244 Query: 212 TMEHFLEAFRDADVDGALAASVF 234 A A D L Sbjct: 245 GASDGQRAL-AAGFDAILVGEAL 266 >UniRef50_A1S1G3 Oxidoreductase, FAD/FMN-binding n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1G3_SHEAM Length = 368 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 6/105 (5%) Query: 18 VKGVQFRNHEIIG----DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI 73 V+ ++G + + +A A E D + F + + + +S V + Sbjct: 221 VRLSPENYANVVGIELQNQLAVANLLAAEDIDYVHFSMGDSFKLANGKNTALLSEVINAL 280 Query: 74 --DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +AG I+ E A ++LS GAD ++I + AL +P I ++ Sbjct: 281 TGKTTLMMAGNIRDGEAAERVLSAGADLVAIGTSALGNPDWIYKV 325 >UniRef50_Q8TXM0 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Methanopyrus kandleri RepID=GGGPS_METKA Length = 239 Score = 56.8 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 57/220 (25%), Gaps = 14/220 (6%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV--AGGIKSLEDAAK 91 + + + G D ++ TA + + VA D+P + G E A Sbjct: 30 EVLESLVKAGTDAVMVGGSTAHASQVEAVVEAIREVA---DVPVILFPNG----PEGLAP 82 Query: 92 ILSFGADKISINSPALAD-PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 +NS + A + + V+ Sbjct: 83 NADAVLFMSLLNSRNTYYLIEAQVKGAPLVERFGLESIPTGYLIVGEWGTTVSVVGDARV 142 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 + + + G + L G E +++V V I GG Sbjct: 143 IPFDRVEVIVAYALAAKHLGMKAVYLEA--GSGAPEPVPPEVVRRV-SGIGVFTIVGGGI 199 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + E E +A D + + + E+ + Sbjct: 200 RSPETARE-LAEAGADAIVTGTAVERDPDLAAEIVEAIKD 238 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 6/99 (6%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFC 78 + + F E+I V A G + + + + V V RV+ I + Sbjct: 141 RVIPFDRVEVI---VAYALAAKHLGMKAVYLEAGSGAPE--PVPPEVVRRVSG-IGVFTI 194 Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 V GGI+S E A ++ GAD I + DP L + Sbjct: 195 VGGGIRSPETARELAEAGADAIVTGTAVERDPDLAAEIV 233 >UniRef50_Q3B2I1 Dihydroorotate oxidase B, catalytic subunit n=12 Tax=Chlorobiaceae RepID=Q3B2I1_PELLD Length = 331 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 21/115 (18%) Query: 34 PLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVSRVAEV 72 +A + GAD + + +T G + V + V V Sbjct: 202 AIAIAAEKAGADSVSLINTLVGMAIDWKKRRPLLKNVTGGLSGPAIKPVALAKVWEVNNA 261 Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 + IP GGI S +DA + L GA + I + P + ++A Sbjct: 262 VSIPIVGMGGIASFDDAMEFLVAGAGAVQIGTMNFVQPDIGEKIATAMEAFFCAP 316 Score = 39.8 bits (92), Expect = 0.077, Method: Composition-based stats. Identities = 8/75 (10%), Positives = 23/75 (30%), Gaps = 1/75 (1%) Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + L ++ +V +P++ GG + + +E A ++ Sbjct: 238 VTGGLSGPAIKPVALAKVWEVNNAVSIPIVGMGGIASFDDAMEFLV-AGAGAVQIGTMNF 296 Query: 236 KQIINIGELKAYLAT 250 Q ++ + Sbjct: 297 VQPDIGEKIATAMEA 311 >UniRef50_Q2S1Z5 Indole-3-glycerol phosphate synthase n=1 Tax=Salinibacter ruber DSM 13855 RepID=TRPC_SALRD Length = 270 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 66/228 (28%), Gaps = 35/228 (15%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D +A++YAE A + +G + +W+ P I Sbjct: 67 RDPFDPAAIAQQYAEHDAAAISVLTEPLHFEGALEHMAWIRAHVPET--PLLRKDFIIDP 124 Query: 87 EDAAKILSFGADKISINSPALADPTLI--TRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + + GAD + + + AL L A G+ C+V + + V+ Sbjct: 125 YQLVEARAVGADAVLLIATALDPGQLAELHAAATELGLSCLVEVYEEEDLDKIDWEQVSV 184 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 + + + + ++ D G Sbjct: 185 LGVNNRDLHTFEVDLDNSLRIF---------------DQTPKGVGR-------------- 215 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +A G E + R A V+G L + + GE + L +G Sbjct: 216 VAESGLSDPETLVR-LRKAGVNGVLIGEHLM-RAEHPGEALSRLRAEG 261 >UniRef50_C8W1S8 Indole-3-glycerol-phosphate synthase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1S8_DESAS Length = 235 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 68/233 (29%), Gaps = 41/233 (17%) Query: 7 IPCL-DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW 65 IP + D++ + + D V +AK AE GA L + + G Sbjct: 18 IPVIPDIK---CISPKEGDLLR-GRDPVEVAKLLAEAGAPALSVVTESKNFGGS---LEL 70 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + R+A + +P I ++D GA+ I + A Sbjct: 71 LERIAALTKLPTLRKDFITCVDDLKITKDCGAEAILLICAA------------------- 111 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN----Q 181 + Y G E E L ++ GA + +N N + Sbjct: 112 -----QPFSLLIKLYEEALKIGLEPLVESHTKEELILAGKI---GAKLVGINNRNILELE 163 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 E L K + + LI+ T A R A D L + Sbjct: 164 RDDGTVSATELLAKYKPKDAI-LISESSIQTPVEAQAAIR-AGADAVLIGTAI 214 >UniRef50_B0N8B0 Putative uncharacterized protein n=6 Tax=Bacteria RepID=B0N8B0_9FIRM Length = 660 Score = 56.4 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 10/95 (10%) Query: 35 LAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVIDIPFCVAGGIKS 85 +AKR D + T G + + + ++IP G + Sbjct: 253 IAKRLEAAQVDMIHVSGGTTIHRGSSIAPPGTPQASHIDSAREIKKCVNIPVSTVGRLNE 312 Query: 86 LEDAAKILSFG-ADKISINSPALADPTLITRLADR 119 ++L AD + L DP + ++ + Sbjct: 313 PWILEEVLERDLADVCMVGRSLLCDPDFVNKIKNG 347 Score = 42.2 bits (98), Expect = 0.019, Method: Composition-based stats. Identities = 20/200 (10%), Positives = 49/200 (24%), Gaps = 28/200 (14%) Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP--------------TLITR 115 E I I G A ++ G D + I++ Sbjct: 152 KEEISIIVEQFGD-----GALRLKKAGIDGVEIHAAHAHALLGGFLSPLYNKRIDEYGGD 206 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + R + V+ V D + E + ++ I Sbjct: 207 ITHRIRLLLEVIANVRKKCGRDFAIIVRISGDDYEAGGQSLHEGCYIAKRLEAAQVDMIH 266 Query: 176 LNM---------MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 ++ + G ++ +++++ ++P+ G E D Sbjct: 267 VSGGTTIHRGSSIAPPGTPQASHIDSAREIKKCVNIPVSTVGRLNEPWILEEVLERDLAD 326 Query: 227 GALAASVFHKQIINIGELKA 246 + + ++K Sbjct: 327 VCMVGRSLLCDPDFVNKIKN 346 >UniRef50_Q2LUD7 Indole-3-glycerol phosphate synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUD7_SYNAS Length = 276 Score = 56.4 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 53/223 (23%), Gaps = 35/223 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D +A+ Y GA + G ++ + + +P I Sbjct: 83 DPAVVAEIYERNGAAAISVLT-DRPFFGGEKFY--LNVIRRTVGLPVLRKDFIIDSWQVY 139 Query: 91 KILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD I + L D L LA G+ +V D + + + Sbjct: 140 ESRMLGADAILLIVGMLEDRQLREYLDLAGTLGLAALVEVHDHEELERAVRANAGIIGIN 199 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 + + ++ V V+ Sbjct: 200 NRNLKNFITDLNTTLELVSSIPGDRFVVT-----------------------------ES 230 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 G + E A + L +L+ L + Sbjct: 231 GIRSREDVQRMM-SAGITAFLIGETLMTAPDIGLKLRQLLGKE 272 >UniRef50_Q2W414 Dioxygenase related to 2-nitropropane dioxygenase n=4 Tax=Proteobacteria RepID=Q2W414_MAGSA Length = 351 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 9/91 (9%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEV------IDIPFCVAGGIKS 85 V A + EG D + + G V + + + IP V GGI + Sbjct: 153 AVKYALKAEAEGVDAVAVVG---AECGGHPGMDMVGTMVQANVAAAKLSIPLLVGGGIGT 209 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRL 116 L+ GAD + + + L + Sbjct: 210 GAHLVAALALGADGVVVGTRFLVAEEIWAHA 240 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 10/90 (11%) Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV------CHVPLI 205 T V + + + + + G + + G ++ + + + +PL+ Sbjct: 146 TVVHKVPAVKYALKAEAEGVDAVAVVGAECGGH---PGMDMVGTMVQANVAAAKLSIPLL 202 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFH 235 GG GT H + A DG + + F Sbjct: 203 VGGGIGTGAHLVAAL-ALGADGVVVGTRFL 231 >UniRef50_Q8EW89 Inosine-5'-monophosphate dehydrogenase n=1 Tax=Mycoplasma penetrans RepID=Q8EW89_MYCPE Length = 483 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 50/165 (30%), Gaps = 27/165 (16%) Query: 77 FCVAGGIK--SLEDAAKILSFGADKISINSPALADP---TLITRLADRFGVQCIVVGIDT 131 C A G+ S+E A +++ G D I I+ L + F ++V Sbjct: 222 VCGAIGVTEDSIERAKLLIAAGVDAIIIDCAHGHSKKVIELTREIKKLFPKLFLIV---- 277 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 + D V+ GA + GV Sbjct: 278 ------------GNVVTANGVNDLYKAGADAVKIGVGPGA---ICTTRTVSGVGIPQFSA 322 Query: 192 QLKKV--REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 L+ + ++P+IA GG ++A A D + S+ Sbjct: 323 ILECYEEAKKLNIPIIADGGIKNSGDMVKAL-AAGADAVMLGSLL 366 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 23/118 (19%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVF------YDITASSD 57 K++ P L + G VV N + GAD + T + Sbjct: 267 KKLFPKLFLIVGNVVTA-NGVNDLY------------KAGADAVKIGVGPGAICTTRTVS 313 Query: 58 GRVV-DKSWVSRV---AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 G + S + A+ ++IP GGIK+ D K L+ GAD + + S Sbjct: 314 GVGIPQFSAILECYEEAKKLNIPIIADGGIKNSGDMVKALAAGADAVMLGSLLAGCDE 371 Score = 43.3 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 7/96 (7%) Query: 8 PCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVS 67 P +D ++ V G + D + AK G D ++ + Sbjct: 212 PLIDSKERPKVCGAIG----VTEDSIERAKLLIAAGVDAIII---DCAHGHSKKVIELTR 264 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISIN 103 + ++ F + G + + + GAD + I Sbjct: 265 EIKKLFPKLFLIVGNVVTANGVNDLYKAGADAVKIG 300 >UniRef50_Q12NI3 NADH:flavin oxidoreductase/NADH oxidase n=14 Tax=Proteobacteria RepID=Q12NI3_SHEDO Length = 369 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 6/114 (5%) Query: 35 LAKRYAEEGADELVFY--DITASSD---GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 LAK + G D L +++ S+ + + +P G I A Sbjct: 250 LAKALQQLGCDFLHVSSGGLSSQQVIPIEAGYQVSFSEAIKAQVSMPVIAVGLITEATQA 309 Query: 90 AKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 I++ AD +++ L +P + A++ V + Sbjct: 310 EAIINTHAADAVALARGILYNPHWVWHAAEQLKATVNVPAQYLRSAPHGSQAQF 363 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 31/102 (30%), Gaps = 5/102 (4%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLN--MMNQDGV---RNGYDLEQLKKVREVCHVPLIASG 208 T +++ + +Q+ G + ++ ++ V GY + + ++ +P+IA G Sbjct: 242 WTLEQSIVLAKALQQLGCDFLHVSSGGLSSQQVIPIEAGYQVSFSEAIKAQVSMPVIAVG 301 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 D A + L Sbjct: 302 LITEATQAEAIINTHAADAVALARGILYNPHWVWHAAEQLKA 343 >UniRef50_B7DTY5 2-nitropropane dioxygenase NPD n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTY5_9BACL Length = 361 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 55/198 (27%), Gaps = 31/198 (15%) Query: 64 SWVSRVAEVIDIPFCVAGGI-----KSLEDAAKILS-----------FGADKISINSPAL 107 + + RV + D PF V I K DA + A+ +I+ Sbjct: 56 AAIRRVRALTDAPFGVNVFIPETPGKDARDAVIAMKIWLREWVNDPGAAAEIDAIDPRFP 115 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 T ++ + VV + T T E + ++ Sbjct: 116 TSATFEAQMDVILEERVPVVSFTFGCPEADTIAKWKEAGACVIGTATTPEEAV----ALE 171 Query: 168 KRGAGEIVLNMMNQDGVRNGY----------DLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + G IV G R + L + +V + +P+IA+GG + Sbjct: 172 RAGCDAIVAQGYEAGGHRGTFLPMDETRLIGTLALVPQVVDRVRIPVIAAGGIMDGRGIV 231 Query: 218 EAFRDADVDGALAASVFH 235 + F Sbjct: 232 ACL-ALGAAAVQMGTSFL 248 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 12/85 (14%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSW-----------VSRVAEVIDIPFCVAGG 82 A G D + + R V +V + + IP AGG Sbjct: 165 EEAVALERAGCDAI-VAQGYEAGGHRGTFLPMDETRLIGTLALVPQVVDRVRIPVIAAGG 223 Query: 83 IKSLEDAAKILSFGADKISINSPAL 107 I L+ GA + + + L Sbjct: 224 IMDGRGIVACLALGAAAVQMGTSFL 248 >UniRef50_B0NDA0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDA0_EUBSP Length = 229 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 57/223 (25%), Gaps = 33/223 (14%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAKI 92 +A E GA + R K + + +D+P GI + E Sbjct: 33 MAVAAKEGGAAGI-----------RANTKEDIKEIQSQVDLPVI---GIVKRDYE----- 73 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 K+ I +P + + + + + + + + Sbjct: 74 ----GSKVYI-TPTMKEIDELMEVGPEIIAVDATSDLRPGNITIDQFFGQIKEKYPDQLL 128 Query: 153 RVTQWETLDWVQEVQKRGAGEIV-----LNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 T++ + G I ++ D E L+K+ +IA Sbjct: 129 MADC-STIEEAIHADELGFDFIGTTMVGYTDQSKGDRIEENDFEILRKIVSNVKNKVIAE 187 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G T + + S+ + + L Sbjct: 188 GNINTPQKARRVIE-LGAFSVVVGSIITRPQLITKSFAEELEK 229 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 5/78 (6%) Query: 32 IVPLAKRYAEEGADEL--VFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 + A E G D + T S G D + ++ + G I + Sbjct: 134 TIEEAIHADELGFDFIGTTMVGYTDQSKGDRIEENDFEILRKIVSNVKNKVIAEGNINTP 193 Query: 87 EDAAKILSFGADKISINS 104 + A +++ GA + + S Sbjct: 194 QKARRVIELGAFSVVVGS 211 >UniRef50_A4SG41 Indole-3-glycerol phosphate synthase n=2 Tax=Bacteria RepID=TRPC_PROVI Length = 258 Score = 56.4 bits (135), Expect = 9e-07, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 57/208 (27%), Gaps = 39/208 (18%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A Y GA L G ++ +VA + +P I Sbjct: 72 DPVRIALAYEALGASALSVLTDRHFFQGSA---GYLQQVAAAVSLPVLRKDFIIDELQIF 128 Query: 91 KILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD I + AL L ++A G+ +V D Sbjct: 129 ESRIMGADAILLIVAALEPSELHDYLQMAGEIGLDVLVEVHDRH---------------- 172 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA-- 206 + ++ GA + +N N +R +IA Sbjct: 173 ------------ELALAIES-GAEVVGVNNRNLKDFSVDPATS--ASLRPYFPSGVIAVS 217 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVF 234 G T + RDA D L Sbjct: 218 ESGLKTADDI-ALVRDAGFDAVLIGEGL 244 >UniRef50_A7NSB8 Dihydroorotate dehydrogenase n=2 Tax=Roseiflexus RepID=A7NSB8_ROSCS Length = 268 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 17/107 (15%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVD-----------------KSWVSRVAEVIDI 75 + A+ + GAD + +S V+ V + Sbjct: 160 IATARSVVDVGADAVTIAAPPRASAADPHTGELVHGWLSGPAIRPLVLEAVAEVCATLPA 219 Query: 76 PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 P GGI + DA L+ GA + + S LADP R+A+ Sbjct: 220 PVVACGGIVTAADARPFLAAGAIAVQVGSALLADPWAAVRIAEALEN 266 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 27/141 (19%), Gaps = 18/141 (12%) Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL------------ 176 D + + V GA + + Sbjct: 129 DDWSAAVRVVAAVRAVTLLPLLVKLPLHARLIATARSVVDVGADAVTIAAPPRASAADPH 188 Query: 177 NMMNQDGVRNGYDL-----EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 G +G + E + +V P++A GG T A Sbjct: 189 TGELVHGWLSGPAIRPLVLEAVAEVCATLPAPVVACGGIVTAADARPFL-AAGAIAVQVG 247 Query: 232 SVFHKQIINIGELKAYLATQG 252 S + L Sbjct: 248 SALLADPWAAVRIAEALENAP 268 >UniRef50_C0QKD0 Dhs1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKD0_DESAH Length = 320 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 51/165 (30%), Gaps = 5/165 (3%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + G +++ N IT+ G+ C ID + + + Sbjct: 79 ARYLADKGYTRVNWNLGCPHSK--ITKKLRGSGLLCRPDLIDAFLEQVVPAIPCSLSVKV 136 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 + + E D + + EI+++ + G D++ ++V L+ + Sbjct: 137 RLGRKTSH-EIFDLLPVFDRYPLDEIIVHPRTGVQLYTGTADIDAFERVLAQSRHILVYN 195 Query: 208 GGAGTMEHFLEAF-RDADVDGALAASVFHKQIINIGELKAYLATQ 251 G + F R ++ + +K + + Sbjct: 196 GDITDKKGFQVLVDRFPEIRSFMIGRGVLADPFLPATIKGEVRDR 240 Score = 43.7 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 43/163 (26%), Gaps = 12/163 (7%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDK 63 +++P + VK R +I L + DE++ + T D Sbjct: 123 QVVPAI--PCSLSVKVRLGRKTSH--EIFDLLPVFDRYPLDEIIVHPRTGVQLYTGTADI 178 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFG 121 RV G I + ++ I LADP L + Sbjct: 179 DAFERVLAQSRHILVYNGDITDKKGFQVLVDRFPEIRSFMIGRGVLADPFLPATIKGEVR 238 Query: 122 VQCIV-----VGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 + + D + G ++ + + + Sbjct: 239 DRTMDLERIKAFHDDLFTTYDGNFYGPSHIAGRMKGFWSYLGP 281 >UniRef50_P47996 Inosine-5'-monophosphate dehydrogenase n=4 Tax=Viridiplantae RepID=IMDH1_ARATH Length = 503 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 39/123 (31%), Gaps = 25/123 (20%) Query: 1 MLA--KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD- 57 M+ K+ P LDV G VV Q A+ + G D L + S Sbjct: 277 MIKYVKKTYPELDVIGGNVVTMYQ-------------AQNLIQAGVDGLRVGMGSGSICT 323 Query: 58 -------GRVVDKSW--VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 GR + V +A IP GGI + K L GA + + S Sbjct: 324 TQEVCAVGRGQATAVYKVCSIAAQSGIPVIADGGISNSGHIVKALVLGASTVMMGSFLAG 383 Query: 109 DPT 111 Sbjct: 384 STE 386 Score = 49.1 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 15/153 (9%), Positives = 40/153 (26%), Gaps = 21/153 (13%) Query: 85 SLEDAAKILSFGADKISINSP---ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 E +++ G + + ++S ++ +I + + ++ G Sbjct: 247 DKERLEHLVNVGVNAVVLDSSQGNSIYQLEMIKYVKKTYPELDVIGGNVVTMYQAQNLIQ 306 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH 201 + T + G + ++ + Sbjct: 307 AGVDGLRVGMGSGSICTTQEVC-----------------AVGRGQATAVYKVCSIAAQSG 349 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +P+IA GG H ++A + S Sbjct: 350 IPVIADGGISNSGHIVKALV-LGASTVMMGSFL 381 >UniRef50_Q814I1 GMP reductase n=106 Tax=Bacteria RepID=GUAC_BACCR Length = 328 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 49/170 (28%), Gaps = 13/170 (7%) Query: 34 PLAKRYAEEGADELVF------YDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIK 84 + GAD IT G + + A+ P GGI+ Sbjct: 153 EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIR 212 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + D AK + FGA + I S +R G + + + A + + Sbjct: 213 THGDVAKSIRFGATMVMIGSLFAGHEESPGETIERDGK----LYKEYFGSASEFQKGEKK 268 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + + D + E+++ I + D +K Sbjct: 269 NVEGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDAIRTVDYVVVK 318 Score = 46.8 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 10/100 (10%) Query: 156 QWETLDWVQEVQKRGAGE---------IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 T + V+E++ GA + + + G+ L L+ + P+IA Sbjct: 148 NVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIA 207 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 GG T ++ R + S+F + GE Sbjct: 208 DGGIRTHGDVAKSIRF-GATMVMIGSLFAGHEESPGETIE 246 >UniRef50_Q7NTY1 GMP reductase n=1 Tax=Chromobacterium violaceum RepID=GUAC_CHRVO Length = 316 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 44/178 (24%), Gaps = 18/178 (10%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDI-----------VPLAKRYAEEGADELVF------YD 51 LD+ + VK + H A+ G D + Sbjct: 116 TLDIANAWCVKAERMIKHIKQHFPNTFLIGGNVATAEAARDLEAWGCDAIKAGIAGGRVC 175 Query: 52 ITASSDG-RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 IT + G S V + IP GGI D AK L GA + S Sbjct: 176 ITKNKTGFHRPMVSTVRDCVAAVTIPVIADGGIVEHGDIAKALVCGATMVMAGSLFAGYD 235 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + + G + +V + +++Q Sbjct: 236 ESAGDIVEIAGKHYKEYFGSASQFNKGAYVNVEGKKILVEYKGSMGKLLRELQEDLQS 293 Score = 49.9 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 15/144 (10%), Positives = 40/144 (27%), Gaps = 8/144 (5%) Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + A + + W + + T + ++++ G I Sbjct: 106 KAAGLSPEYMTLDIANAWCVKAERMIKHIKQHFPNTFLIGGNVATAEAARDLEAWGCDAI 165 Query: 175 VL------NMMNQDGVR-NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 + ++ + + ++ +P+IA GG +A Sbjct: 166 KAGIAGGRVCITKNKTGFHRPMVSTVRDCVAAVTIPVIADGGIVEHGDIAKALV-CGATM 224 Query: 228 ALAASVFHKQIINIGELKAYLATQ 251 +A S+F + G++ Sbjct: 225 VMAGSLFAGYDESAGDIVEIAGKH 248 >UniRef50_UPI0001C41E29 NADH:flavin oxidoreductase/NADH oxidase family protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41E29 Length = 316 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 35/107 (32%), Gaps = 6/107 (5%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDI-----TASSDGRVVDKSWVSRVAEVIDIPFC 78 + DI K + E G D + S K E DIP Sbjct: 207 EGGSKMEDIPAAVKSFVESGVDMIDISGGLCRYQNPYSREPGYFKDLSKIAKESCDIPVI 266 Query: 79 VAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQC 124 + GG+K +DA ++++ G D I I L D + + Sbjct: 267 LTGGVKKAKDAERLINEGYCDLIGIGRALLMDGDWSKKAIRKVRKIK 313 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 24/221 (10%), Positives = 56/221 (25%), Gaps = 36/221 (16%) Query: 50 YDITASSDGRVVDK-----SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 + S V+ + + + +E A + G D + I++ Sbjct: 100 HGRYGSISSNNVNLNGISIEEIEDIKKAF------------VEAAVRSQKSGFDGVEIHA 147 Query: 105 PA------LADPTLITR-------LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 P R L +R + ++ + + D Sbjct: 148 AHEYLLNQFYSPYTNKRTDEYGGSLENRMRLHNEIIREIREAVGDDYIIAIRFGAYDYLE 207 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNM---MNQDGVRNGYDL--EQLKKVREVCHVPLIA 206 + V+ + G I ++ Q+ + K +E C +P+I Sbjct: 208 GGSKMEDIPAAVKSFVESGVDMIDISGGLCRYQNPYSREPGYFKDLSKIAKESCDIPVIL 267 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFH-KQIINIGELKA 246 +GG + + D + ++ Sbjct: 268 TGGVKKAKDAERLINEGYCDLIGIGRALLMDGDWSKKAIRK 308 >UniRef50_B2A1T3 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1T3_NATTJ Length = 652 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 44/154 (28%), Gaps = 14/154 (9%) Query: 29 IGDIVPLAKRYAEEGADE------------LVFYDITASSDGRVVDKSWVSRVAEVIDIP 76 + D A++ G D L + + + + +++P Sbjct: 238 LEDAKKTAEKLENVGVDAFDVTGGSDDVIHLYVPSSYVLEENEGCFIDLAAEIKKTVNVP 297 Query: 77 FCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL-ADRFGVQCIVVGIDTWYD 134 GG++S + A ++L G D I + +ADP ++++ + V Sbjct: 298 VMSGGGVESPDAAEQLLESGQVDMIFMGRQLIADPEWVSKIEKENIEGIKQCVKCVECGK 357 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + D + K Sbjct: 358 RIAFLRDMRCAVNPIVGNEWKYLTEKDLPKAANK 391 Score = 46.8 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 10/103 (9%), Positives = 34/103 (33%), Gaps = 12/103 (11%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQD------------GVRNGYDLEQLKKVREVCH 201 +T + ++++ G + + D G ++ ++++ + Sbjct: 236 ITLEDAKKTAEKLENVGVDAFDVTGGSDDVIHLYVPSSYVLEENEGCFIDLAAEIKKTVN 295 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 VP+++ GG + + + VD + ++ Sbjct: 296 VPVMSGGGVESPDAAEQLLESGQVDMIFMGRQLIADPEWVSKI 338 >UniRef50_P59441 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=3 Tax=Firmicutes RepID=NANE_LACPL Length = 228 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 29/188 (15%) Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + + + +D+P G K+ + I + C Sbjct: 54 IQAIQDEVDLPLI-----------------GLSKVDYPDSPVYITPTIKEMRAVAATGCA 96 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQW-----ETLDWVQEVQKRGAGEI--VLNM 178 VV D + + +T++ V+ K G I ++ Sbjct: 97 VVACDVTGQPRPNGEKLAEIVATMRTEFPDTLLMADTDTIENVKVADKLGFDIIGTTMHG 156 Query: 179 MNQDGVRNGY---DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 D LK+V + P+IA G T E D + Sbjct: 157 YTPATTGANIADNDFAYLKEVLQATSRPVIAEGKVDTPEKMKRCL-DLGCHAVVVGGAI- 214 Query: 236 KQIINIGE 243 + + I + Sbjct: 215 TRPLEIAQ 222 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 5/92 (5%) Query: 31 DIVPLAKRYAEEGADEL--VFYDITASSDGRVV---DKSWVSRVAEVIDIPFCVAGGIKS 85 D + K + G D + + T ++ G + D +++ V + P G + + Sbjct: 134 DTIENVKVADKLGFDIIGTTMHGYTPATTGANIADNDFAYLKEVLQATSRPVIAEGKVDT 193 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLA 117 E + L G + + + R Sbjct: 194 PEKMKRCLDLGCHAVVVGGAITRPLEIAQRFI 225 >UniRef50_Q0AJQ0 Indole-3-glycerol phosphate synthase n=5 Tax=Proteobacteria RepID=Q0AJQ0_NITEC Length = 306 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 57/210 (27%), Gaps = 17/210 (8%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 +A YA GA L G + ++ + D+P + + Sbjct: 100 PTDIAASYARNGAACLSVLTDEQFFMG---NADFLRQARAACDLPVLRKDFMLDEYQVYE 156 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + GAD I + A P F + D+ + + Q G Sbjct: 157 ARAMGADCILLIVAAFFSP--------IFQHDSAINQGDSALERMHKLETIAQELGMAVL 208 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA-SGGA 210 V + LD ++ I +N N D L+ V+ + +I G Sbjct: 209 VEVHNADELDLALQLST---PLIGINNRNLKTFETTLDT-TLQLVKHIPSGRIIVTESGI 264 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIIN 240 T + L F + Sbjct: 265 RTPADVEMMLSHC-IHTFLIGETFMRAPDP 293 >UniRef50_B5GVV9 Isopentenyl-diphosphate delta-isomerase II n=2 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GVV9_STRCL Length = 403 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 5/97 (5%) Query: 33 VPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLED 88 A R + GAD L+ + D + VAE + IP G+++ D Sbjct: 271 ADEAVRLRDAGADALIVSNHGG-RQLDSGPAALDCLPLVAEAVGDQIPVLFDSGVRTGTD 329 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 L+ GA + I P L R ++C+ Sbjct: 330 VLIALALGASAVMIGRPWLYGLATGGRAGVEHVLRCL 366 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 4/81 (4%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCH--VPLIASGGAGTMEHF 216 D ++ GA ++++ + +G L+ L V E +P++ G T Sbjct: 271 ADEAVRLRDAGADALIVSNHGGRQLDSGPAALDCLPLVAEAVGDQIPVLFDSGVRTGTDV 330 Query: 217 LEAFRDADVDGALAASVFHKQ 237 L A + + Sbjct: 331 LIAL-ALGASAVMIGRPWLYG 350 >UniRef50_O29513 Dihydroorotate dehydrogenase n=3 Tax=Archaeoglobaceae RepID=PYRD_ARCFU Length = 299 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 35/96 (36%), Gaps = 21/96 (21%) Query: 31 DIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSWVSRV 69 D + LAK + G D + + ++ G + + V + Sbjct: 169 DYLKLAKVLEDAGVDGITISNTLRGMKIDIMSGKPVLSNLSGGVSGPAIKPIALKCVYDL 228 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 + I++P GGI S ED + + GA + I S Sbjct: 229 YKEIEVPIVGCGGITSFEDVLEFIMAGARAVQIGSA 264 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 22/114 (19%) Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQD----------------GVRNGYDLEQLK----- 194 + L + ++ G I ++ + G +G ++ + Sbjct: 167 MHDYLKLAKVLEDAGVDGITISNTLRGMKIDIMSGKPVLSNLSGGVSGPAIKPIALKCVY 226 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + + VP++ GG + E LE A S + LK L Sbjct: 227 DLYKEIEVPIVGCGGITSFEDVLEFIM-AGARAVQIGSAVYYSRRIFYSLKESL 279 >UniRef50_UPI0001789498 N-acylglucosamine-6-phosphate 2-epimerase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789498 Length = 235 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 34/244 (13%), Positives = 67/244 (27%), Gaps = 52/244 (21%) Query: 15 GQVV--KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEV 72 G VV + + +V +AK GA D ++ + Sbjct: 9 GLVVSCQAYEGEPLFGPQHMVEMAKAAVLGGA--------IGIRANGTAD---IAAIKAA 57 Query: 73 IDIPFCV--AGGIK--------SLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + +P I+ +LEDA + GAD ++++ P Sbjct: 58 VSVPVIGLLKRQIEGYPVYITPTLEDALAVHEAGADIVAMDGTRRPRPD----------- 106 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN---MM 179 V + TL+ G I Sbjct: 107 -------------GNKLKEVVDELIRRGIHVMADVSTLEEGLYAADLGVHYISTTLSGYT 153 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 D+ + ++ + +P+IA G + + ++A +A + S + Sbjct: 154 AYSPESTKPDIGLVARLVQETRLPVIAEGRFASADDMIQAL-NAGARFVVVGSAI-TRPQ 211 Query: 240 NIGE 243 +I E Sbjct: 212 DITE 215 >UniRef50_Q5KGP0 Putative uncharacterized protein n=3 Tax=Filobasidiella neoformans RepID=Q5KGP0_CRYNE Length = 496 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 19/177 (10%), Positives = 42/177 (23%), Gaps = 16/177 (9%) Query: 77 FCVAGGIKSLEDAAKILSF---GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 G + E A K I +N + + + Sbjct: 179 LIFQIGSSNPELAVKAAQTVQQDVAGIDLNCGCPKPFSTHAGMGAAL----LSTPELLLD 234 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV-RNGYDLEQ 192 + + R TQ TL + + G + ++ + E+ Sbjct: 235 ILRALLDSIPLPISCKIRLLPTQPSTLYLASRILRTGVRNLTVHCRTRQMRPGERALWER 294 Query: 193 LKKVRE---VCHVPLIASGGAGTMEHFLEAFRDAD-----VDGALAASVFHKQIINI 241 L + E + +I +G ++ + D + A + Sbjct: 295 LSSIVELGKRRGISVICNGDGEGWSNWDRIRNETGMCASCADSVMLARSAERNPSVF 351 >UniRef50_P49058 Inosine-5'-monophosphate dehydrogenase n=23 Tax=cellular organisms RepID=IMDH_BORBU Length = 404 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 59/193 (30%), Gaps = 39/193 (20%) Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD---PTLITRLADRFGVQC 124 RV + I I ++E +++ D + I+S LI ++ ++ Sbjct: 143 RVGAAVSI------DIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLD 196 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR-----GAGEIVLNMM 179 ++ VT+ LD + G G I + Sbjct: 197 LIA-----------------------GNIVTKEAALDLISVGADCLKVGIGPGSICTTRI 233 Query: 180 -NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 GV + + + ++ +IA GG ++A A D + ++F Sbjct: 234 VAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAI-AAGADSVMIGNLFAGTK 292 Query: 239 INIGELKAYLATQ 251 + E Y + Sbjct: 293 ESPSEEIIYNGKK 305 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 35/115 (30%), Gaps = 23/115 (20%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVF------YDITASSDGRV 60 P LD+ G +V A GAD L T G Sbjct: 192 YPNLDLIAGNIV-------------TKEAALDLISVGADCLKVGIGPGSICTTRIVAGVG 238 Query: 61 V-DKSWVSRVAEVID---IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 V + + V E + I GGI+ D K ++ GAD + I + Sbjct: 239 VPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKE 293 >UniRef50_C7PJL9 2-nitropropane dioxygenase NPD n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJL9_CHIPD Length = 353 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 11/109 (10%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----------DLEQLKK 195 + V ++ V+K GA +V + G R + + + Sbjct: 147 LKQKGIVLVGTATSVQEAVLVEKAGADAVVAQGIEAGGHRGSFLDDEPLPMVGTFVLVPE 206 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + +P+IA+GG AF+ + F ++ Sbjct: 207 IVAHVKIPVIAAGGIRGGSTIRAAFQ-LGAKAVQIGTAFIASQESLAIA 254 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 40/137 (29%), Gaps = 12/137 (8%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKS-----------WVSRVAEVIDIPFCVAG 81 V A + GAD +V I + R V + + IP AG Sbjct: 161 VQEAVLVEKAGADAVVAQGIE-AGGHRGSFLDDEPLPMVGTFVLVPEIVAHVKIPVIAAG 219 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 GI+ GA + I + +A + + + + V A +G++ Sbjct: 220 GIRGGSTIRAAFQLGAKAVQIGTAFIASQESLAIASYKTALPKAQVTDSALTRAFSGRWA 279 Query: 142 VNQYTGDESRTRVTQWE 158 + + Sbjct: 280 RGIRNQFMDTVEASGLK 296 >UniRef50_Q0EWN8 Indole-3-glycerol phosphate synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWN8_9PROT Length = 264 Score = 56.0 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 58/212 (27%), Gaps = 31/212 (14%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D V +A+ YA GA L +T + + D S+V + + + +P + Sbjct: 70 RPDFDPVAIARSYASGGASCLSV--LTDVNYFQGAD-SYVRDIRKAVSLPILRKDFMLDP 126 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + + GAD I + + D + A + V+ ++ Sbjct: 127 YQIIEAKAMGADAILVILAMVDDTLALELTACARDLGLSVLPEVHNAAELERAMKLDTEL 186 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 + + ++T + D +I Sbjct: 187 MGINNRNLHTFDTTLDTTLELL---------GLMGDQR------------------TVIT 219 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 G T A A V G L +Q Sbjct: 220 ESGIFTRNDI-AAMNAAGVYGFLIGESLMRQP 250 >UniRef50_Q8CN30 Thiazole synthase n=10 Tax=Staphylococcus RepID=THIG_STAES Length = 255 Score = 55.6 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 6/93 (6%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSW-VSRVAEVIDIPFCVAGGIKS 85 I + + LA+R E G + + GR ++ +S + E +P V GI S Sbjct: 130 YISNDLVLAQRLEELGVHA--VMPLASPIGTGRGINNPLNLSYIIENASVPVIVDAGIGS 187 Query: 86 LEDAAKILSFGADKISINSP--ALADPTLITRL 116 +DA + GAD I +N+ A DP + Sbjct: 188 PKDACHAMELGADGILLNTAISAAKDPVKMAEA 220 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 39/145 (26%), Gaps = 5/145 (3%) Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTW--YDAETGKYHVNQYTGDESRTRVTQWETL 160 A+ + ++ V+G D D L Sbjct: 76 AQEAIRIAEIANHAGVCDMIKVEVIGDDETLLPDPFETYEACKVLLEKGYTVCPYISNDL 135 Query: 161 DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVCHVPLIASGGAGTMEHFLEA 219 Q +++ G ++ + G G + L + E VP+I G G+ + A Sbjct: 136 VLAQRLEELGVHAVMPLA-SPIGTGRGINNPLNLSYIIENASVPVIVDAGIGSPKDACHA 194 Query: 220 FRDADVDGALAASVFHKQIINIGEL 244 DG L + + Sbjct: 195 ME-LGADGILLNTAISAAKDPVKMA 218 >UniRef50_C0YT12 Possible 2-nitropropane dioxygenase n=3 Tax=Bacteroidetes RepID=C0YT12_9FLAO Length = 355 Score = 55.6 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 64/210 (30%), Gaps = 27/210 (12%) Query: 47 LVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADK------- 99 L D++A + ++ D PF + + L K Sbjct: 43 LALADLSADQS-----VELIRETKKLTDKPFAANIFVHYIPAVTDALKEKYSKTRQFIEQ 97 Query: 100 -ISINSPALADPTLITRLADRFGVQCIVVGIDTW----YDAETGKYHVNQYTGDESRTRV 154 NS + P L + + Q + + + Q + T + Sbjct: 98 LARENSIQVQLPDLDAIGINSYHEQVDAIIQEGCKILSFTFGNLDDQSIQKLKENGVTLI 157 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE---------QLKKVREVCHVPLI 205 +++ ++K G I + + G R ++ E L ++ + +VPLI Sbjct: 158 GTCTSVNEALMLEKSGIDIICVQGIEAGGHRGSFEAEDIPQIGGLSLLSQIYDQVNVPLI 217 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +GG +A +D G ++ Sbjct: 218 YAGGIYGSRTL-QAVKDLGAQGFQVGNLLL 246 Score = 42.5 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 11/89 (12%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVD----------KSWVSRVAEVIDIPFCVAGG 82 V A + G D + I + R S +S++ + +++P AGG Sbjct: 163 VNEALMLEKSGIDIICVQGIE-AGGHRGSFEAEDIPQIGGLSLLSQIYDQVNVPLIYAGG 221 Query: 83 IKSLEDAAKILSFGADKISINSPALADPT 111 I + GA + + LA Sbjct: 222 IYGSRTLQAVKDLGAQGFQVGNLLLASQE 250 >UniRef50_A8MLA4 NADH:flavin oxidoreductase/NADH oxidase n=3 Tax=Clostridiaceae RepID=A8MLA4_ALKOO Length = 352 Score = 55.6 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 10/138 (7%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY---DITASSDGRVVDKSW--- 65 V+D V+ N + + +AK++ G D L D T D Sbjct: 207 VQDDFVIGIRMGSNENDLQTSIEMAKKFEALGMDYLHISTGFDNTPIETELPEDFPCNWI 266 Query: 66 ---VSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFG 121 +++ E ++IP IK+ E ++ D ++I LAD + L + G Sbjct: 267 VYGATKIKEAVNIPVVAVNSIKTAEHIQYLVDGDLVDFVAIGRAQLADYNFVKHLQEGNG 326 Query: 122 VQCIVVGIDTWYDAETGK 139 + + + Sbjct: 327 IISCLECNPCQWFTNGEN 344 Score = 40.2 bits (93), Expect = 0.073, Method: Composition-based stats. Identities = 17/165 (10%), Positives = 48/165 (29%), Gaps = 17/165 (10%) Query: 86 LEDAAKILSFGADKISIN-------SPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 ++ A + G D I ++ + + ++ + + Sbjct: 146 IDAAIRAEKAGFDGIELHGAHSYLLTQFFSSKVNQRTDEYGGSLENGMRMATEIFKGIKE 205 Query: 139 KYHVNQYTGDESRTRVTQWET-LDWVQEVQKRGAGEIVL------NMMNQDGVRNGY-DL 190 K + G + +T ++ ++ + G + + + + + + Sbjct: 206 KVQDDFVIGIRMGSNENDLQTSIEMAKKFEALGMDYLHISTGFDNTPIETELPEDFPCNW 265 Query: 191 EQLK--KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 K++E ++P++A T EH VD Sbjct: 266 IVYGATKIKEAVNIPVVAVNSIKTAEHIQYLVDGDLVDFVAIGRA 310 >UniRef50_C5XE16 Putative uncharacterized protein Sb02g039250 n=1 Tax=Sorghum bicolor RepID=C5XE16_SORBI Length = 342 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 5/98 (5%) Query: 32 IVPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVI--DIPFCVAGGIKSLE 87 A++ E G ++ + D S + V + + +P V GGI+ Sbjct: 211 TAEDARKAVEAGVSGVILSNHGG-RQLDYAPATISALEEVVKAVEGSVPVLVDGGIRRGT 269 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 D K L+ GA + + P L R ++ + Sbjct: 270 DVLKALALGAKAVMVGRPVLYGLAARGEAGARHVIEML 307 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 27/82 (32%), Gaps = 4/82 (4%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVREVC--HVPLIASGGAGTMEH 215 T + ++ + G ++L+ + + L++V + VP++ GG Sbjct: 211 TAEDARKAVEAGVSGVILSNHGGRQLDYAPATISALEEVVKAVEGSVPVLVDGGIRRGTD 270 Query: 216 FLEAFRDADVDGALAASVFHKQ 237 L+A + Sbjct: 271 VLKAL-ALGAKAVMVGRPVLYG 291 >UniRef50_A1BHW3 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=Chlorobiaceae RepID=A1BHW3_CHLPD Length = 411 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 1/91 (1%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLA 117 R + + + + IP GGI ++ED + +L G AD ++++ P + +P ++ +L Sbjct: 308 RNYNLEVARAIKKAVSIPVIAVGGIHTMEDISAVLVSGAADFVAMSRPFIIEPDIVRKLR 367 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + + + + Y Sbjct: 368 EGSQTESRCIACNYCAIMIEEGPLRCWYGKM 398 Score = 53.7 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 26/59 (44%) Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 Y+LE + +++ +P+IA GG TME D + F + + +L+ Sbjct: 310 YNLEVARAIKKAVSIPVIAVGGIHTMEDISAVLVSGAADFVAMSRPFIIEPDIVRKLRE 368 >UniRef50_A8MDA4 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=GGGPS_CALMQ Length = 267 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 71/237 (29%), Gaps = 17/237 (7%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV----A 80 + + + LAK + G+D L+ ++G + + + V + + +P + Sbjct: 25 DKVTMDKFIELAKGAEKAGSDALMIGGSYGVNEGTLDNY--IDAVKQEVKLPIILFPGSV 82 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 G+ DA LS + ++ + A + G+ Sbjct: 83 AGLSRRADAVLFLS-----VLNSTDPYYIIGAQVQAAVLMAKHYSNLESIPMAYIIVGEG 137 Query: 141 HVNQYTGDESRTRVTQWET-LDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 + + + + G I L G R + KV+ Sbjct: 138 GAVGFASYAKPIPFHMEDVIVAYALAAYYMGFSAIYLE--AGSGAREPVPSSVVAKVKRA 195 Query: 200 CHVPL-IASGGAGTMEHFLEAFRDADVDGALAASVFHKQI-INIGELKAYLATQGVE 254 + + GG + E + A D + +V + + + ++ + G+ Sbjct: 196 VRNKILMVGGGIKSPE-AAYSIALAGADVIITGTVIEESPAVVLKDIVDAVHRGGLR 251 >UniRef50_A0N0V5 Putative NADH-dependent flavin oxidoreductase n=2 Tax=Proteobacteria RepID=A0N0V5_9RHOO Length = 371 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 6/98 (6%) Query: 29 IGDIVPLAKRYAEEGADELVF-----YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 + + V A+ + G D + + A R+ DI V G I Sbjct: 244 VDETVAFARELRKLGCDYIDVSSGGLHPAQAVPLAPAYHAEIAQRIRNEADIKVMVVGLI 303 Query: 84 KSLEDAAKILSFG-ADKISINSPALADPTLITRLADRF 120 A KI+ G AD + + A+ DP A+ F Sbjct: 304 ADPHVATKIVESGQADFVCMGRGAMWDPRFPWHAAETF 341 >UniRef50_Q1AU90 Indole-3-glycerol phosphate synthase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AU90_RUBXD Length = 255 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 55/219 (25%), Gaps = 37/219 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D A Y +GA L +T R + R E +P Sbjct: 71 DPAEQAALYERQGARCLSV--LTEPERFRGS-LEDLRRAREASSLPVLRKDFTVDEAQVL 127 Query: 91 KILSFGADKISINSPALADPTL--ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + + AD + + + L LA GV +V D + + Sbjct: 128 EA-AARADAVLLIAALFTGEELARYVALAGEVGVDALVEVHDEREAELALAAGASIVGVN 186 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 R + + + LE + +V E Sbjct: 187 NRDLRDFSVDLGTFERL---------------------SPLLEGVVRVAES--------- 216 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 G T E R+A D L + +G + A Sbjct: 217 GIKTAEDARRM-REAGADAVLVGEAAMRDPGLVGRIAAI 254 >UniRef50_C0GCL4 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCL4_9FIRM Length = 244 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 A G L + S V V + +++P V GGI++ A ++L Sbjct: 157 YAAAAQLMGFKYLYLESGSGSPVSVPP--EMVKAVKDTVEMPVIVGGGIRTAAVARQLLE 214 Query: 95 FGADKISINS 104 GAD + + Sbjct: 215 AGADILVTGT 224 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 5/100 (5%) Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 R QW + Q G + L G E +K V++ +P+I GG Sbjct: 147 DRDDQWTVCGYAAAAQLMGFKYLYLES--GSGSPVSVPPEMVKAVKDTVEMPVIVGGGIR 204 Query: 212 TMEHFLEAFRDADVDGALAASVF--HKQIINIGELKAYLA 249 T +A D + +V H+ + E+ A L Sbjct: 205 TAA-VARQLLEAGADILVTGTVVERHEYKQRLSEILAVLQ 243 >UniRef50_Q4QEB3 Inosine-5'-monophosphate dehydrogenase n=8 Tax=cellular organisms RepID=Q4QEB3_LEIMA Length = 553 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 23/134 (17%) Query: 9 CLDVRDGQ------VVKGVQFRNHEIIGDIV-------PLAKRYAEEGADELVF------ 49 +D+ G +VK ++ DI+ A+ + GAD L Sbjct: 319 VVDIAHGHSDLCIDMVKALKVNPLTNKVDIIAGNIATAEAAQDLIDAGADGLKIGVGPGS 378 Query: 50 YDITASSDGRVV-DKSWV---SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 IT G V S V +RVA+ +P GGIK+ D K ++ GAD + + + Sbjct: 379 ICITRLVAGSGVPQLSSVMDCARVAKKHGVPCIADGGIKTAGDICKAIAAGADTVMLGNM 438 Query: 106 ALADPTLITRLADR 119 R+ + Sbjct: 439 LAGTDEAPGRVLVK 452 Score = 49.9 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 19/175 (10%) Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG-----DESRTR 153 ++ + + R A V+ +D + + + ++ Sbjct: 290 RLIVGAAIGVKKEDHERAAALVDAGADVLVVDIAHGHSDLCIDMVKALKVNPLTNKVDII 349 Query: 154 VTQWETLDWVQEVQKRGAGE---------IVLNM-MNQDGVRNGYDLEQLKKVREVCHVP 203 T + Q++ GA I + + GV + +V + VP Sbjct: 350 AGNIATAEAAQDLIDAGADGLKIGVGPGSICITRLVAGSGVPQLSSVMDCARVAKKHGVP 409 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC 258 IA GG T +A A D + ++ G + L G +++I Sbjct: 410 CIADGGIKTAGDICKAI-AAGADTVMLGNMLAGTDEAPGRV---LVKDGKKVKII 460 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 34/101 (33%), Gaps = 15/101 (14%) Query: 8 PCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVS 67 LD R +V E A + GAD LV + + V Sbjct: 283 ATLDSRGRLIVGAAIGVKKEDH----ERAAALVDAGADVLVV---DIAHGHSDLCIDMVK 335 Query: 68 RVA-----EVIDIPFCVAGGIKSLEDAAKILSFGADKISIN 103 + +DI +AG I + E A ++ GAD + I Sbjct: 336 ALKVNPLTNKVDI---IAGNIATAEAAQDLIDAGADGLKIG 373 >UniRef50_A1WLV1 NADH:flavin oxidoreductase/NADH oxidase n=37 Tax=Bacteria RepID=A1WLV1_VEREI Length = 804 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 42/117 (35%), Gaps = 12/117 (10%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASS--------DGRVVDKSWVSRVAEVIDI 75 D V +AK + GAD + D +A GR+ + R+ + I Sbjct: 668 EGGTTPDDAVQIAKAFKAAGADMI---DCSAGQVSKKEQPVYGRMFQTPFADRIRQEAGI 724 Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 G I + A IL+ G AD +I P LA+P A R G I Sbjct: 725 ATIAVGAISEADHANSILAAGRADLCAIARPHLANPAWTLTEAARIGYTPIDWPRQY 781 >UniRef50_C8P8F1 2-enoate reductase n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P8F1_9LACO Length = 707 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 10/94 (10%) Query: 33 VPLAKRYAEEGADELVFYDITASSD---GRVVDKS------WVSRVAEVIDIPFCVAGGI 83 V LAK GAD L TA + V V + E + IP G I Sbjct: 293 VRLAKEVERVGADALNVTIATADTQVLISEPVSYEPGWRQYLVKAIKEAVSIPIIAVGVI 352 Query: 84 KSLEDAAKILSFGA-DKISINSPALADPTLITRL 116 ++ A IL G D I + P LADP + + Sbjct: 353 RTPNQAEAILRSGTQDFIGLARPMLADPQWMQKA 386 Score = 43.7 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 59/208 (28%), Gaps = 30/208 (14%) Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKI--------SINSPALADPTLITR---- 115 ++ E + IP + ++ A + GAD + +N L Sbjct: 182 QLVEELSIPEIKRIEGQFVDAAERAQKAGADGVELHAGHGYLLNQFTSPYSNLRKDGYGG 241 Query: 116 --------LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 +A+ G D + G +T E + +EV+ Sbjct: 242 PIENRVRIIAEIIQGIKKRCGSDFPISVRLTVDEFYEKIGYPQM-GITLPEGVRLAKEVE 300 Query: 168 KRGAGEIVLNMMNQDGV---RNGYDLE------QLKKVREVCHVPLIASGGAGTMEHFLE 218 + GA + + + D E +K ++E +P+IA G T Sbjct: 301 RVGADALNVTIATADTQVLISEPVSYEPGWRQYLVKAIKEAVSIPIIAVGVIRTPNQAEA 360 Query: 219 AFRDADVDGALAASVFHKQIINIGELKA 246 R D A + + + Sbjct: 361 ILRSGTQDFIGLARPMLADPQWMQKARE 388 >UniRef50_D1CBJ1 Tryptophan synthase alpha chain n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBJ1_THET1 Length = 279 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 71/249 (28%), Gaps = 59/249 (23%) Query: 33 VPLAKRYAEEGADELV--------FYD---ITASSDGRVVD-------KSWVSRVAEVID 74 V +AK YAE GAD + D I +S+ + + +A + Sbjct: 34 VEIAKMYAETGADIIELGVPFSDPLADGPTIQRASNRALANGTTLRSSLEVAENIAREVS 93 Query: 75 IPF--------CVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 IP + G++ + G + I + ++ + + V + Sbjct: 94 IPIVMMSYYNPILRYGVQRF--FQDASNSGISAVIIPDLLPEESEEVSTYSSEYEVGLVF 151 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + T + + + + + L + + Sbjct: 152 LVAPT-----------------------STVDRIKLAAQAANAFLYCVSLTGVTGA-RDS 187 Query: 187 GYDL--EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF---HKQIINI 241 D L+ VR +PL+ G +H + + DG + AS + + Sbjct: 188 LPDYLEPFLRTVRGQTDLPLVVGFGISKPDHIRQLHQF--ADGVVVASAIISMIENSPSW 245 Query: 242 GELKAYLAT 250 E L Sbjct: 246 QEALDSLRA 254 >UniRef50_A3QE46 2-nitropropane dioxygenase, NPD n=20 Tax=Gammaproteobacteria RepID=A3QE46_SHELP Length = 361 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 45/193 (23%), Gaps = 24/193 (12%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLE--------DAA--KILSFGADKISINSPALADPTLI 113 + R P E A ++L+ D++ I + Sbjct: 54 DEIKRFRAATSAPL--NLNFFCHELPPFDKQAQARWHELLAPYFDELEIAADLGQGGASR 111 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR-TRVTQWETLDWVQEVQKRGAG 172 + ++ T+ + + RG Sbjct: 112 MPFNHEIADAIEAFKPEVISFHFGLPQENLLERVRSWGAKVISSATTVAEAEYLAARGVD 171 Query: 173 EIVLNMMNQDGVRNGYDLE----------QLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 I++ + G R + + L K+ PLIA+GG G A Sbjct: 172 GIIVQGVEAGGHRGMFLSDDVSTQVELEPLLTKIASRVDAPLIAAGGIGDSHGVKAAL-A 230 Query: 223 ADVDGALAASVFH 235 S + Sbjct: 231 MGASAVQIGSAYL 243 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 10/90 (11%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRV----------VDKSWVSRVAEVIDIPFCVAG 81 V A+ A G D ++ + A + + ++++A +D P AG Sbjct: 158 TVAEAEYLAARGVDGIIVQGVEAGGHRGMFLSDDVSTQVELEPLLTKIASRVDAPLIAAG 217 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPT 111 GI L+ GA + I S L Sbjct: 218 GIGDSHGVKAALAMGASAVQIGSAYLLCDE 247 >UniRef50_B2V726 Dihydroorotate dehydrogenase n=2 Tax=Aquificales RepID=PYRD_SULSY Length = 311 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 23/137 (16%) Query: 29 IGDIVPLAKRYAEEGADELVFYD------------------ITASSDGR---VVDKSWVS 67 + +I+ A GAD LV + IT G + + Sbjct: 170 VSNILDTADACVSAGADGLVLINTLLGVAIDVEREKPILSTITGGLSGPAMLPIAVRMIW 229 Query: 68 RVAEVID--IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 +V + IP GGI + +DA + + GA I + + DP ++ + Sbjct: 230 QVYQKYGSRIPIIGVGGISNYKDALQHILAGASAIQVGTANFYDPLSPLKIIEDLKNHLD 289 Query: 126 VVGIDTWYDAETGKYHV 142 G + + + Sbjct: 290 KKGYVHYSQLIGKAHQM 306 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 7/85 (8%) Query: 175 VLNMMNQDGVRNGYDLEQLKKVREV--CHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + + + +V + +P+I GG + L+ A + Sbjct: 210 TITGGLSGPAMLPIAVRMIWQVYQKYGSRIPIIGVGGISNYKDALQHI-LAGASAIQVGT 268 Query: 233 VFHKQII----NIGELKAYLATQGV 253 + I +LK +L +G Sbjct: 269 ANFYDPLSPLKIIEDLKNHLDKKGY 293 >UniRef50_B1I129 2-nitropropane dioxygenase, NPD n=12 Tax=Bacteria RepID=B1I129_DESAP Length = 315 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 6/131 (4%) Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--G 187 D + V + + V+ + + +K GA +V + G Sbjct: 93 DVIFTGAGFSRDVFDWGREGRVPIVSIVSSARLAKMAEKLGAAAVVAESGDAGGHLGTER 152 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA-SVFHKQIINIGEL-- 244 E L ++R ++P+IA+GG + + R DG A + + Sbjct: 153 STAEILPEIRSAVNIPVIAAGGIISGRDIADMVR-MGADGVQMATRFVLSTECAVSDAFK 211 Query: 245 KAYLATQGVEI 255 + YL ++ Sbjct: 212 QHYLKANADDV 222 Score = 53.3 bits (127), Expect = 8e-06, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 2/90 (2%) Query: 35 LAKRYAEEGADELVFY--DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 LAK + GA +V D + + ++IP AGGI S D A + Sbjct: 125 LAKMAEKLGAAAVVAESGDAGGHLGTERSTAEILPEIRSAVNIPVIAAGGIISGRDIADM 184 Query: 93 LSFGADKISINSPALADPTLITRLADRFGV 122 + GAD + + + + A + Sbjct: 185 VRMGADGVQMATRFVLSTECAVSDAFKQHY 214 >UniRef50_C1E9S0 Predicted protein n=2 Tax=cellular organisms RepID=C1E9S0_9CHLO Length = 499 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 22/205 (10%), Positives = 51/205 (24%), Gaps = 35/205 (17%) Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-----SFGADKISINSPALADPTLITRLADRFGVQCI 125 E + + G S E A + D+I++N ++ + + + Sbjct: 85 EEHPLTVQLGG--ASPERLALAATVCDAEYRYDEINLNCGCPSNRVVNKKDVATCFGAAL 142 Query: 126 VVGIDT---WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV-----------QKRGA 171 + V R T+ D + Q G Sbjct: 143 MRDPTHVGECLRRMREAVDVPVTVKHRLGVRPTEKSPDDSMDSYAFVSEFVDVVNQASGV 202 Query: 172 GEIVLNMMNQDGVR------------NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 +++ ++ L + + +GG TM+ E Sbjct: 203 KHFIVHARAAVLSGLSTTGNRTVPPLRHAEVHALAD--DFPSLGFTLNGGIETMDQAAEH 260 Query: 220 FRDADVDGALAASVFHKQIINIGEL 244 + G + ++ + E+ Sbjct: 261 LESGKLRGVMLGRAVYRNPAVLAEV 285 >UniRef50_A4EBM5 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A4EBM5_9ACTN Length = 678 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 14/187 (7%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFY--------DITASSDGR-VVDK--SWVSRVA 70 + + + AK G D + T G + RV Sbjct: 262 RGKGGLQPDEACEFAKLLEGAGIDMIQVAQANHTGNMGDTIPPMGAMPYNWTLPVAERVK 321 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGI 129 ++ +P G + S+E KIL G AD I+ + DP + + A ++ + Sbjct: 322 ALVSVPVATVGRVVSVEAGEKILEDGAADIIAYGRSLMCDPDIALKAATGEPIRECLNCN 381 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQ-WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 DA + +++ E+ T + + ++V G G I + + GY Sbjct: 382 KGCVDAIQNRKYISCVLNAENGDEATIAIKPGEGDKKVAVVG-GGIAGLEAARVAAKRGY 440 Query: 189 DLEQLKK 195 D+ + Sbjct: 441 DVTVYEA 447 >UniRef50_A5WFG6 FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WFG6_PSYWF Length = 352 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 59/200 (29%), Gaps = 20/200 (10%) Query: 66 VSRVAEVIDIPFCVAGGIKS-LEDAAKILS----FGADKISI--NSPALADPTLITRLAD 118 + + +V P I+ LE A K+L G + I +S A A ++ Sbjct: 130 LEDIQQVATTPIWFQLYIQDDLEFAKKVLKQAEAAGCKAVCITLDSVAAAVRNEEDKVGF 189 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL-- 176 + + + + + Q GA I++ Sbjct: 190 ELSKDLNMPYKIGRPAPVSWQEVEMLIAYTSLPVLIKGIVNAEDAQRALDIGASGIIVSN 249 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + + +E L++V E VP++ GG L+A D L Sbjct: 250 HG-GRKLDTAPPTIEALQRVAERVDHRVPVLIDGGIRRGTDVLKAL-ALGADAVLLGK-- 305 Query: 235 HKQIINIGELKAYLATQGVE 254 I + ++GV Sbjct: 306 -----PIAQALGAAGSEGVA 320 Score = 50.6 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 33 VPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLED 88 A+R + GA ++ + D + RVAE +D +P + GGI+ D Sbjct: 231 AEDAQRALDIGASGIIVSNHGG-RKLDTAPPTIEALQRVAERVDHRVPVLIDGGIRRGTD 289 Query: 89 AAKILSFGADKISIN 103 K L+ GAD + + Sbjct: 290 VLKALALGADAVLLG 304 >UniRef50_Q2FKX6 Tryptophan synthase alpha chain n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKX6_METHJ Length = 259 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 31/242 (12%), Positives = 55/242 (22%), Gaps = 62/242 (25%) Query: 27 EIIGDI-----VPLAKRYAEEGADELV--------FYDIT----------ASSDGRVVDK 63 + GD + + K GAD + D AS Sbjct: 20 TVAGDPDFETSLEIIKALENGGADIIELGLPFSDPVADGPVIQQADQRALASGMNTDRFF 79 Query: 64 SWVSRVAEVIDIPF--------CVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 V V + DIP + I + G D + + Sbjct: 80 DLVREVRKSSDIPLVVLTYTNLILQRDINTF--YQDAADAGIDAVVVA------------ 125 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + +A T + + + + Sbjct: 126 -------------DLPYEEAGPYITAAETAGVAPVMMVSTTTSPERLSKILTVKSGFIYL 172 Query: 176 LNMMNQDGVRNGYDL---EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + + G+R D + L ++ +P+ G E E DA D + S Sbjct: 173 VAALGVTGMRQKTDPVAQKLLADLKNRTDIPIAPGFGISDREQVREW-TDAGADAVIVGS 231 Query: 233 VF 234 Sbjct: 232 AL 233 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 20/56 (35%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 V + ++ + DIP GI E + GAD + + S + + Sbjct: 183 QKTDPVAQKLLADLKNRTDIPIAPGFGISDREQVREWTDAGADAVIVGSALVREIE 238 >UniRef50_C2KD02 Enoyl-[acyl-carrier-protein] reductase (NADH) n=3 Tax=Lactobacillus crispatus RepID=C2KD02_9LACO Length = 312 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL-KKVREVCHVPLIASGGAGTMEH 215 + +++++ GA +++ M G G L ++ + ++PLIA+GG G Sbjct: 116 IPNVKIAKKMEEMGADAVIVEGMEAGGHIGGTTSMVLWPQIADAINIPLIAAGGIGDGRG 175 Query: 216 FLEAFRDADVDGALAASVF 234 +EAF A +G ++F Sbjct: 176 VVEAFV-AGAEGVQCGTIF 193 Score = 49.9 bits (118), Expect = 9e-05, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVS-RVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK+ E GAD ++ + A + ++A+ I+IP AGGI + Sbjct: 119 VKIAKKMEEMGADAVIVEGMEAGGHIGGTTSMVLWPQIADAINIPLIAAGGIGDGRGVVE 178 Query: 92 ILSFGADKISINSPA 106 GA+ + + Sbjct: 179 AFVAGAEGVQCGTIF 193 >UniRef50_B2RZT4 NIFR3-like protein n=23 Tax=Borrelia RepID=B2RZT4_BORHD Length = 335 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 39/120 (32%), Gaps = 14/120 (11%) Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVR---------E 198 E +V+++ + ++ + D + + K+R E Sbjct: 144 REYHEENYTELQQFVEKIMEYEIKNFTVHARIAILNGYSPKDNQNIPKLRHDFVYRLKQE 203 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL-KAYLATQ-GVEIR 256 ++ + +GG + +H VD + K I ++ + +L + + R Sbjct: 204 HKNIFIEVNGGIKSSDHIKTHLSY--VDSVMIGRAVAKDPYLIAKISREFLEEKEKIPTR 261 Score = 42.5 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 48/150 (32%), Gaps = 19/150 (12%) Query: 35 LAKRYAEEGADELVFYDITASSDG-RVVD--------KSWVSRVAEVI-DIPFCVAGGIK 84 ++ E + A +G D +V R+ + +I V GGIK Sbjct: 157 FVEKIMEYEIKNFTVHARIAILNGYSPKDNQNIPKLRHDFVYRLKQEHKNIFIEVNGGIK 216 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRF--------GVQCIVVGIDTWYDAE 136 S + LS+ D + I DP LI +++ F + I++ + + Sbjct: 217 SSDHIKTHLSY-VDSVMIGRAVAKDPYLIAKISREFLEEKEKIPTREEILLKMVEYIKEY 275 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 ++ + + Q + Sbjct: 276 DECLSISTILKHIMSIVFAKENACKFRQTL 305 >UniRef50_B2S5Z1 Indole-3-glycerol phosphate synthase n=45 Tax=Alphaproteobacteria RepID=TRPC_BRUA1 Length = 268 Score = 55.2 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 63/228 (27%), Gaps = 35/228 (15%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D LAK Y E GA L T S G +++ + +P + Sbjct: 72 RPDFDPPALAKAYEEGGAACLSVLTDTPSFQGAP---EFLTAARQACSLPALRKDFLFDP 128 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + S+GAD I I ++ D D + E + + Sbjct: 129 YQVYEARSWGADCILIIMASVDD--------------------DLAKELEDTAFALGMDA 168 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP--L 204 E L + G N++ +L +++ ++ L Sbjct: 169 LIEVHDEAEMERALKLSSRL--LGVN-------NRNLRSFEVNLAVSERLAKMAPSDRLL 219 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + G T E L + + L +Q +A L Sbjct: 220 VGESGIFTHEDCLR-LEKSGIGTFLIGESLMRQHDVAAATRALLTGAE 266 >UniRef50_UPI000169A137 bifunctional sulfur carrier protein/thiazole synthase protein n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI000169A137 Length = 182 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 4/86 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEVIDIPFCV 79 F D +AKR E G + A + ++ + + E +P V Sbjct: 5 GFDVMVYTNDDPIMAKRLEELGCCA--VMPLAAPIGSGLGIRNRLNIRTIVENARVPILV 62 Query: 80 AGGIKSLEDAAKILSFGADKISINSP 105 G+ + DAA + G D + +N+ Sbjct: 63 DAGVGTASDAAVAMELGCDGVLMNTA 88 >UniRef50_C7QGH7 Thiazole biosynthesis family protein n=2 Tax=Actinobacteria (class) RepID=C7QGH7_CATAD Length = 296 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 1/77 (1%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 D V LAKR + G ++ S V + + + + + IP + GI + D Sbjct: 165 SDDPV-LAKRLEQIGCAAVMPAGAPIGSGLGVRNPHNIELMVDAVSIPVILDAGIGTASD 223 Query: 89 AAKILSFGADKISINSP 105 A + G + + + Sbjct: 224 ATLAMELGCSAVMLATA 240 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 3/73 (4%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + +++ G ++ G G + ++ + + +P+I G GT A Sbjct: 170 LAKRLEQIGCAAVMPAG-APIGSGLGVRNPHNIELMVDAVSIPVILDAGIGTASDATLAM 228 Query: 221 RDADVDGALAASV 233 + A+ Sbjct: 229 E-LGCSAVMLATA 240 >UniRef50_O05413 Probable nitronate monooxygenase n=3 Tax=Bacillus subtilis group RepID=2NPD_BACSU Length = 347 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 51/189 (26%), Gaps = 24/189 (12%) Query: 66 VSRVAEVIDIPFCVAG----GIKSL--EDAAKILSFGADKISINSPAL---ADPTLITRL 116 + + E+ D PF + G++ + K +N ++ Sbjct: 55 IKEIFELTDAPFQINVFVPLGLEMPPKDQIKKWKENIPLANQVNQFTSVQEEWDDFYQKI 114 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + E + T T++ +++RG +VL Sbjct: 115 DLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGT----ASTVEEALLMEERGMDIVVL 170 Query: 177 NMMNQDGVRNGYD----------LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 G R + + + + + VP+IA+GG A Sbjct: 171 QGSEAGGHRGAFLPSKGESAVGLMALIPQAADALSVPVIAAGGMIDHRGVKAAL-TLGAQ 229 Query: 227 GALAASVFH 235 G S F Sbjct: 230 GVQIGSAFL 238 Score = 51.0 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 36/134 (26%), Gaps = 29/134 (21%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIV-----------------PLAKRYAEEGADELVFYDI 52 +D+ VK F D V A E G D +V Sbjct: 114 IDLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGTASTVEEALLMEERGMDIVVLQG- 172 Query: 53 TASSDGRVVDKS-----------WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKIS 101 + + R + + A+ + +P AGG+ L+ GA + Sbjct: 173 SEAGGHRGAFLPSKGESAVGLMALIPQAADALSVPVIAAGGMIDHRGVKAALTLGAQGVQ 232 Query: 102 INSPALADPTLITR 115 I S L Sbjct: 233 IGSAFLICHESNAH 246 >UniRef50_B5H1G9 Indole-3-glycerol-phosphate synthase n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H1G9_STRCL Length = 243 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 56/221 (25%), Gaps = 29/221 (13%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 R+ LA Y + GA L T G + VA+ D+P Sbjct: 38 GRDLFAGRSAARLATAYRDAGAPCLSVV--TGHWFGGTP--ELLREVADHTDLPLLHKDF 93 Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + + + GA + + + L TL + G+ T + H Sbjct: 94 LTRRSQLDESRAAGASAVLLTAALLPRSTLGGLVEHALGLGLTPFVEVTREAEISRVPH- 152 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV-CH 201 + V + + + G L V++ Sbjct: 153 ----------------AEECAIAVNNKD-----ITARERGAGDLGRSYALLPAVQDSGTR 191 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 P+ ASG E R+ G L + Sbjct: 192 CPVSASG-IHRPEAAARLLRE-GFAGVLVGTGLLSTESLPE 230 >UniRef50_O28668 Anthranilate phosphoribosyltransferase n=4 Tax=Euryarchaeota RepID=TRPCD_ARCFU Length = 546 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 66/203 (32%), Gaps = 37/203 (18%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + + Y + GA + + ITA + + ++ + D+P I+ ++ + Sbjct: 43 DILRAYEKAGAAAISY--ITAEQFSG--NFETLKKIVGLTDLPVLRKDFIRGRKEVERTA 98 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 A + + + L + G E Sbjct: 99 EVEAAALLLIARHLK-------------------------ERTAEMVDFCFEHGIEPLVE 133 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGT 212 V E L + + A +++N + D + G ++ K+ E ++ G G+ Sbjct: 134 VHHAEDLVYAEN-----ARAVLINNRDIDRMERDGGSIDVTAKIAEKIRAFKVSGSGIGS 188 Query: 213 MEHFLEAFRDADVDGALAASVFH 235 +E L + VD AL + F Sbjct: 189 VEDLLFVLQY--VDAALIGTAFM 209 >UniRef50_B8DSF9 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSF9_DESVM Length = 372 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 16/134 (11%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITA--------SSDGRVVD-------KSWVSRVAEVI 73 + D++ A++ G + + TA + R+ + + R + Sbjct: 231 VDDMLEAARQAVAAGVEAVEMSGGTAMNPPNRMPARVTRIRNPEDEAWYREAARRFKAEV 290 Query: 74 DIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 P + GGI++ + A +++ G D +S+ P + +P L+ R A+ + + + Sbjct: 291 GAPLILVGGIRTPQVAQQLVDAGTVDMLSLCRPLIREPGLVRRWAEGDDARAACISCNKC 350 Query: 133 YDAETGKYHVNQYT 146 Y Sbjct: 351 YGPLRENRGFYCPV 364 >UniRef50_A1ZW11 Oxidoreductase, 2-nitropropane dioxygenase family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZW11_9SPHI Length = 358 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 32/101 (31%), Gaps = 16/101 (15%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDK-------------SWVSRVAEVIDIPFCVA 80 A E G D +V + + G S +++ + P A Sbjct: 165 EEALLLEEAGVDIIV---ASGAQAGGHRAWFLPKNKEVLMDTPSLLTQTTAQVKTPVIAA 221 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 GGI + ++A L GA + I + LA + Sbjct: 222 GGITNGQEAFSALQAGASAVQIGTAFLATQESNAPDVHKHK 262 Score = 51.0 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 38/160 (23%), Gaps = 11/160 (6%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E + D +++ P + V + V Q Sbjct: 90 FETVKAVFKPYFDALNVPLPEAPPAAQTQHFDQQMEAILQVSPPAMSFIFGVPPKEVIQA 149 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN----------GYDLEQLKK 195 + + +++ G IV + G R L + Sbjct: 150 LRKRQTVVIATATHPEEALLLEEAGVDIIVASGAQAGGHRAWFLPKNKEVLMDTPSLLTQ 209 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 P+IA+GG + A + A + F Sbjct: 210 TTAQVKTPVIAAGGITNGQEAFSALQ-AGASAVQIGTAFL 248 >UniRef50_Q47R37 Thiazole synthase n=124 Tax=Bacteria RepID=THIG_THEFY Length = 266 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 7/91 (7%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEVIDIPFCVAGGIKSLE 87 D V LA+R A+ G + A + + + + E +D+P + GI + Sbjct: 147 DDPV-LARRLAQVGCAA--VMPLGAPIGSGMGIRNPHNIELIVEELDVPVILDAGIGTAS 203 Query: 88 DAAKILSFGADKISINSPA--LADPTLITRL 116 DAA + G D + + + DP L+ Sbjct: 204 DAALAMELGCDAVLLATAVTRAQDPVLMAHA 234 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 24/200 (12%), Positives = 50/200 (25%), Gaps = 21/200 (10%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 LA G + + + + V +P + DA + Sbjct: 42 LADALRASGTEMTTVAMRRVDPNAQGSVWDVLRE-TGVRPLPNTAGC--FTAVDALRTAR 98 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 G + + N ++ + D + + Sbjct: 99 LGREALETN---------------WVKLEVVADERTLLPDPVETLDAAERLVDEGFVVLA 143 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTM 213 + + + + G ++ G G + ++ + E VP+I G GT Sbjct: 144 YTNDDPVLARRLAQVGCAAVMPLG-APIGSGMGIRNPHNIELIVEELDVPVILDAGIGTA 202 Query: 214 EHFLEAFRDADVDGALAASV 233 A D L A+ Sbjct: 203 SDAALAME-LGCDAVLLATA 221 >UniRef50_C0ZCE3 Indole-3-glycerol phosphate synthase n=2 Tax=Bacillales RepID=C0ZCE3_BREBN Length = 266 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 31/227 (13%), Positives = 63/227 (27%), Gaps = 34/227 (14%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 V +AK Y A+ L + G S++ ++ EV+D P + Sbjct: 66 RPDFQAVTIAKAYQAAQAECLSVLTDESFFQGS---LSYLRQIHEVVDRPLLRKDFLLDE 122 Query: 87 EDAAKILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + + GAD + + + L TL + A+ G+ ++ D + + Sbjct: 123 IQVVEARAAGADCVLLIAAILDRETLRHLNQTAEELGMDVLIEVHDKRECELVFQAMEPK 182 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 G +R T E + ++ + Sbjct: 183 LLGINNRNLNTF--------------------------QTDLAVTHELIAELPASLTI-- 214 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 ++ G T + A L F +Q + + Sbjct: 215 VSESGISTPADIENV-QSAGARAVLVGEHFMRQTDVERAVIDLVGEA 260 >UniRef50_C9XJU2 Dihydroorotate dehydrogenase, catalytic subunit n=5 Tax=Clostridium difficile RepID=C9XJU2_CLODC Length = 361 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 36/176 (20%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELV------------------ 48 IP + VK +I +I AK+ E GAD + Sbjct: 141 IPVI-------VKL-----PPMIDEIGDFAKKLEEAGADAITACDSVGPAFRIDIETGQP 188 Query: 49 FYDITASSD-----GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISIN 103 + + + + + ++IP GG S +DA +++ GAD + I Sbjct: 189 LLGGNGIGYLSGETIKPITLQRIYEIKKQVNIPIIGLGGCVSGDDALEMIMAGADFVGIC 248 Query: 104 SPA-LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 S L +I+++ D +G +T +A ++ + T E Sbjct: 249 SVVILKGAQVISKIHDDLKSNLNRLGYNTIENACGIVHNHMGDVNERLSFEFTYDE 304 Score = 40.2 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 58/175 (33%), Gaps = 26/175 (14%) Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL- 160 + L+ ++A+ +V D K + + + Sbjct: 96 VGHTIEESSELVEKVANAGADFIELVSYDYRDLIPMLKDAKERVNIPVIVKLPPMIDEIG 155 Query: 161 DWVQEVQKRGAGEIV------------------LNMMNQDGVRNG-----YDLEQLKKVR 197 D+ +++++ GA I L N G +G L+++ +++ Sbjct: 156 DFAKKLEEAGADAITACDSVGPAFRIDIETGQPLLGGNGIGYLSGETIKPITLQRIYEIK 215 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS-VFHKQIINIGELKAYLATQ 251 + ++P+I GG + + LE A D S V K I ++ L + Sbjct: 216 KQVNIPIIGLGGCVSGDDALEMIM-AGADFVGICSVVILKGAQVISKIHDDLKSN 269 >UniRef50_A9IBQ0 Putative uncharacterized protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IBQ0_BORPD Length = 314 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 3/100 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPL--AKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAE 71 G V+ + ++ D+ + A+R E G D L+ G + +++ V Sbjct: 116 GPAVRAIHDYGGKVYCDVATVKHARRAIEAGVDGLILLCAGAGGHTGWINPFAFLREVRS 175 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 D P +AGGI GAD + + + LA Sbjct: 176 FFDGPVVLAGGITDGRAIRAAQLLGADGVYMGTRFLAAQE 215 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 2/98 (2%) Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPL 204 D T+ + + G ++L G + L++VR P+ Sbjct: 122 IHDYGGKVYCDVATVKHARRAIEAGVDGLILLCAGAGGHTGWINPFAFLREVRSFFDGPV 181 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +GG + A + DG + F ++ Sbjct: 182 VLAGGITDGR-AIRAAQLLGADGVYMGTRFLAAQESLA 218 >UniRef50_Q4N9T6 TRNA-dihydrouridine synthase A, putative n=2 Tax=Theileria RepID=Q4N9T6_THEPA Length = 471 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 25/202 (12%), Positives = 60/202 (29%), Gaps = 34/202 (16%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGV------------QCIVVGIDTWY 133 +E + FG D+I++N+ P + + +F + + Sbjct: 176 VEAGRILKKFGYDEINLNAGCP-SPRVSGKGIYKFMLKLFNLGCFGASLMKEKELVRDIA 234 Query: 134 DAETGKYHVNQYTGDESRTR--VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY--- 188 + + + D+V V + G +++ Sbjct: 235 HHMLRELEMPVTVKTRLGVDEFDSYEFVRDFVSTVSESGCDHFIIHSRKAWLKGINPKQN 294 Query: 189 ------DLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVD---------GALAAS 232 E++ ++ R+ H+ +GG TME LEA ++D G + Sbjct: 295 RTIPPLQYEKVYRLQRDFPHLKFTINGGFKTMESILEALNSENLDSNNNPHKLNGVMIGR 354 Query: 233 VFHKQIINIGELKAYLATQGVE 254 + ++ + + + Sbjct: 355 LAYENPCLLSNVDKLIYGVENP 376 >UniRef50_C0W3B1 Indole-3-glycerol-phosphate synthase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3B1_9ACTO Length = 274 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 70/208 (33%), Gaps = 36/208 (17%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 +GD+ LA+ Y GA + T D + V +D+P V I + Sbjct: 70 VGDVAVLARFYEAGGAACVSVV--TEPVYSNG-DLRDLDAVRGAVDVPVLVNDLIVTPYQ 126 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + + GAD + +++ DP ++ L +R ++ ++ E Sbjct: 127 VHEARAHGADLLKLDARL--DPLILESLIERTASLGMLAVVEAHSRRE------------ 172 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL--IA 206 + GA + ++ + D + D + ++V EV + +A Sbjct: 173 --------------AITAVENGARCVAVDARDPDTLE--VDPSRFEQVAEVLPTSVLRVA 216 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVF 234 GG ++ R A D L Sbjct: 217 EGGVSGARDVMDYAR-AGADVVLVGEAL 243 >UniRef50_A9LZ84 Inosine-5'-monophosphate dehydrogenase n=57 Tax=cellular organisms RepID=A9LZ84_NEIM0 Length = 498 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 58/204 (28%), Gaps = 31/204 (15%) Query: 47 LVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 + DI +++ +K R+ + G + E ++ G D I +++ Sbjct: 207 ITVKDILKTTEFPNANKDSEGRLR--VGAAVGTGGD--TEERVKALVEAGVDVIVVDTAH 262 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 +I R+ + I T LD V Sbjct: 263 GHSQGVIDRVRWVKETYPHIQVI--------------------GGNIATAKAALDLVAAG 302 Query: 167 QKR-----GAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 G G I + GV + + + + VPLIA GG +A Sbjct: 303 ADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVPLIADGGIRFSGDIAKAL 362 Query: 221 RDADVDGALAASVFHKQIINIGEL 244 A + +F GE+ Sbjct: 363 -AAGAYSVMLGGMFAGTEEAPGEI 385 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 10/95 (10%) Query: 32 IVPLAKRYAEEGADELVF------YDITASSDGRVV-DKSWVSRVAEVID---IPFCVAG 81 A GAD + T G V + + VAE + +P G Sbjct: 291 TAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVPLIADG 350 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 GI+ D AK L+ GA + + + Sbjct: 351 GIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEI 385 Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 5/86 (5%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVID-IPF 77 + GD K E G D +V + V V E I Sbjct: 228 RLRVGAAVGTGGDTEERVKALVEAGVDVIVV---DTAHGHSQGVIDRVRWVKETYPHIQV 284 Query: 78 CVAGGIKSLEDAAKILSFGADKISIN 103 G I + + A +++ GAD + + Sbjct: 285 I-GGNIATAKAALDLVAAGADAVKVG 309 >UniRef50_Q47C62 Dihydroorotate dehydrogenase n=3 Tax=Proteobacteria RepID=Q47C62_DECAR Length = 336 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 76/260 (29%), Gaps = 45/260 (17%) Query: 33 VPLAKRYAEEGADELVFY------------DITAS--------------------SDGRV 60 + + GA +V + I Sbjct: 28 LDAVLHLEDAGAAAIVMHSLFEEDVRHDEQMIDRFLVHPDTFGEATGHLPFGHDYQSRLD 87 Query: 61 VDKSWVSRVAEVIDIPFCV--AGGIKS--LEDAAKILSFGADKISINSPALA-DPTLITR 115 + R+ + IP G S +E ++ GAD + +N+ + DP + Sbjct: 88 SYLEQIQRLKSRLAIPVVASLNGSSLSGWVELGKEMQGAGADALELNAWYMPSDPKISCE 147 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET--LDWVQEVQKRGAGE 173 + V + + K + ++ + + Sbjct: 148 AIEDHHVSLLQELKTVVSIPVSMKLSPFFSSLPHFVHQIEMAGAAGISLFNRFFQPDIDL 207 Query: 174 IVLNMMNQDGVRNGYD----LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 L+++++ + + D + + +R + L A+GG T E L+ A D A Sbjct: 208 ETLSVVDRVQLSSSADTLLAMRWIAILRGSTKLSLAATGGVHTAEDALKML-LAGADVAH 266 Query: 230 AASVFH-KQIINIGELKAYL 248 AS + +GE+ A + Sbjct: 267 MASALLKRGPQALGEVLAAM 286 >UniRef50_C7P1Q4 Indole-3-glycerol-phosphate synthase n=5 Tax=Halobacteriaceae RepID=C7P1Q4_HALMD Length = 267 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 61/210 (29%), Gaps = 35/210 (16%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 D V LA++ E GA L G ++R+ E +D+P + E Sbjct: 66 TEDPVALAEQMVEGGAAALSVLTEPEHFGGSAA---TLARIREAVDVPVLRKDFVLHEEQ 122 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + AD I + IV +D + Sbjct: 123 LDVV---EADVILL----------------------IVRFLDEPGTGDLADLLSAARERG 157 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIA 206 T T D + + GA + +N D + DL+ ++V V L+A Sbjct: 158 FQVLVETH--TADELARAVEAGAEIVGVNNR--DLAKLAVDLDTFERVAPDAPEGVTLVA 213 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHK 236 G + R A D L S Sbjct: 214 ESGIQSPADVARM-RRAGADALLVGSAIMD 242 >UniRef50_Q7UJL3 Inosine-5'-monophosphate dehydrogenase n=2 Tax=Bacteria RepID=Q7UJL3_RHOBA Length = 539 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 63/211 (29%), Gaps = 33/211 (15%) Query: 37 KRYAEEGADELVFYDITASSDG--RVVDKSWVSRVAEVIDIP-----FCVAGGIKSLEDA 89 K E+ ++L+ D G + D + R P A G+ E A Sbjct: 219 KILTEKRVEKLLLIDEERKLTGLITIRDIDMMKRYPRACKDPQGRLRVGAAIGVGDYERA 278 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 ++ G D + ++S +I + K + + Sbjct: 279 ESLIGKGVDVLVVDSAHGHSRNVIETV-------------------REIKQNKSWDIDVV 319 Query: 150 SRTRVTQWETLDWVQEVQKR-----GAGEIVLNM-MNQDGVRNGYDLEQLKKVREVCHVP 203 + T D + G G I ++ GV + KV + ++P Sbjct: 320 AGNVATAEGAADLIAAGADAVKVGIGPGSICTTRVISGIGVPQVTAILSAVKVAQEKNIP 379 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +IA GG +A A + S+F Sbjct: 380 VIADGGIRFSGDITKAI-AAGASTVMIGSLF 409 Score = 46.8 bits (110), Expect = 6e-04, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 32/127 (25%), Gaps = 12/127 (9%) Query: 32 IVPLAKRYAEEGADELVF------YDITASSDGRV-----VDKSWVSRVAEVIDIPFCVA 80 A GAD + T G S V VA+ +IP Sbjct: 325 TAEGAADLIAAGADAVKVGIGPGSICTTRVISGIGVPQVTAILSAVK-VAQEKNIPVIAD 383 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 GGI+ D K ++ GA + I S ++ G A Sbjct: 384 GGIRFSGDITKAIAAGASTVMIGSLFAGLAESPGKMILYQGRTFKAYRGMGSMGAMVKGS 443 Query: 141 HVNQYTG 147 Sbjct: 444 SDRYRQK 450 >UniRef50_B8F9B4 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9B4_DESAA Length = 415 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 68/234 (29%), Gaps = 25/234 (10%) Query: 30 GDIVPLAKRYAEEGADELVFYD---------ITASSDGRVVDK--SWVSRVAEVIDIPFC 78 D V A+ + G D + + +T ++ R S+V R+ +++I + Sbjct: 149 EDYVRSAEICEQAGFDGVQIHAGHGYLINQFLTPYTNRRDDQYGGSFVKRLRLLLEIYW- 207 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAET 137 GI+ + I+ GAD + L+ L+ + + + Sbjct: 208 ---GIRERTNLTVIMKINGADYLP-GRQGLSTAQLVEVARILQEEGLDALEVTVGHYESG 263 Query: 138 GKYHVNQYTGDESRTRVTQWET-----LDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 + + + I + + G++L Sbjct: 264 FPMIRGNFGPFFKGLMEEGIGPQLPWFRRFGITCFRHPLAYIFDH---IWPAQEGFNLHY 320 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 ++ ++ +P+I GG T EH +A D + Sbjct: 321 AREFKKKLSIPVICVGGFLTREHMEQAIDGGACDAVSVGRAMIADPYLFRNILN 374 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 1/86 (1%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLA 117 + + + + IP GG + E + + G D +S+ +ADP L + Sbjct: 314 EGFNLHYAREFKKKLSIPVICVGGFLTREHMEQAIDGGACDAVSVGRAMIADPYLFRNIL 373 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVN 143 + A Sbjct: 374 NGENGPKCSFCNACIARAGRLPVDCY 399 >UniRef50_C9KP46 Oxidoreductase, FAD/FMN-binding n=2 Tax=Clostridiales RepID=C9KP46_9FIRM Length = 349 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 58/194 (29%), Gaps = 18/194 (9%) Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA------LADPTLITR-------LA 117 + + +P + A + + G D + I+S P R + Sbjct: 155 QELTVPQIAEIVEQFARAAERAKTAGYDGVEIHSAHAYLLNQFYSPLTNHREDNYGGNID 214 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 +R + V+ + + D S +++ + + G + + Sbjct: 215 NRLRIHREVIRAVRDAVGKEFIISLRLGGCDYSEGGSVIEDSVYASKVLADAGIDMLNIT 274 Query: 178 M----MNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + G GY + +++ +P++ +GG T+E ++ D Sbjct: 275 GGMCRYTRKGHNEPGYFQDMSSAIKKAVSIPVMLTGGVKTLEDAETLLKNEAADLIGVGR 334 Query: 233 VFHKQIINIGELKA 246 K + E Sbjct: 335 EIMKNPYWLNEQLE 348 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 6/98 (6%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDI----TASSDGRV-VDKSWVSRVAEVIDIPFC 78 +I D V +K A+ G D L T + S + + + IP Sbjct: 248 EGGSVIEDSVYASKVLADAGIDMLNITGGMCRYTRKGHNEPGYFQDMSSAIKKAVSIPVM 307 Query: 79 VAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITR 115 + GG+K+LEDA +L AD I + + +P + Sbjct: 308 LTGGVKTLEDAETLLKNEAADLIGVGREIMKNPYWLNE 345 >UniRef50_C4G9N4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9N4_9FIRM Length = 338 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 53/165 (32%), Gaps = 12/165 (7%) Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + G +++++N+ PT+ + ++ + + G + Sbjct: 99 LSDLGYEEVNLNAGCP-SPTVTAKGKGCGMLEDTLKLNRFFDRVFEGLERQRIPVRISVK 157 Query: 152 TRVTQWET---LDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 TR+ + D ++ ++++ +G D + K E ++P+ + Sbjct: 158 TRLGMEDAGEMEDLMRVYTMYPIARLMIHARVGRAAYSGMPDQDSFCKALEKNNLPVSYN 217 Query: 208 GGAGTMEHFLEAFRDA-------DVDGALAASVFHKQIINIGELK 245 G T E + A +G + + +++ Sbjct: 218 GDILTPEDGEKILVRAEGHDLQKHFNGLMLGRGVLRDPALFRKVR 262 Score = 47.9 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 11/108 (10%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIP 76 VK E G++ L + Y L+ + ++ + D+ + E ++P Sbjct: 156 VKTRLG--MEDAGEMEDLMRVYTMYPIARLMIHARVGRAAYSGMPDQDSFCKALEKNNLP 213 Query: 77 FCVAGGIKSLEDAAKI--------LSFGADKISINSPALADPTLITRL 116 G I + ED KI L + + + L DP L ++ Sbjct: 214 VSYNGDILTPEDGEKILVRAEGHDLQKHFNGLMLGRGVLRDPALFRKV 261 >UniRef50_Q47B08 2-nitropropane dioxygenase, NPD n=2 Tax=Proteobacteria RepID=Q47B08_DECAR Length = 334 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 2/100 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY-DITASSDGRVVDKSWVSRVAEVIDIP 76 V G + + LA++ A+ GAD LV + G + ++ V + P Sbjct: 124 VHGYGGIVMADVINP-TLARKAADAGADVLVLVTNGAGGHTGSYHPFALIAEVRKFWSGP 182 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +AG I S D GAD + + +A + Sbjct: 183 LGLAGAITSGTDIRAAQLLGADFVLAGTRFIATTESLAEA 222 >UniRef50_A7HV28 2-nitropropane dioxygenase NPD n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HV28_PARL1 Length = 354 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 10/90 (11%) Query: 36 AKRYAEEGADELVFYD----------ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 A+ GAD ++ + G V + V +V + +++P AGGI Sbjct: 162 ARALESGGADAIIAQGHEAGGHRGTFLDHVDLGTVGTMALVPQVVDAVNVPVIAAGGIGD 221 Query: 86 LEDAAKILSFGADKISINSPALADPTLITR 115 A GA + + + LA P Sbjct: 222 ARGIAAAFMLGAAGVQLGTAYLACPEANVH 251 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 11/86 (12%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGY----------DLEQLKKVREVCHVPLIASGGAGT 212 + ++ GA I+ G R + + + +V + +VP+IA+GG G Sbjct: 162 ARALESGGADAIIAQGHEAGGHRGTFLDHVDLGTVGTMALVPQVVDAVNVPVIAAGGIGD 221 Query: 213 MEHFLEAFRDADVDGALAASVFHKQI 238 AF G + + Sbjct: 222 ARGIAAAFM-LGAAGVQLGTAYLACP 246 >UniRef50_Q6BVL8 DEHA2C01584p n=4 Tax=Dikarya RepID=Q6BVL8_DEBHA Length = 378 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 7/80 (8%) Query: 34 PLAKRYAEEGADELVF--YD---ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 A+ GAD ++ + + + V+ V IP + GGI+ D Sbjct: 240 EDAEMAVNAGADGIIVSNHGGRQLDGALSTLDALPDVVAAV--NGRIPVHIDGGIRRGSD 297 Query: 89 AAKILSFGADKISINSPALA 108 K L+ GAD + A+ Sbjct: 298 IFKALALGADHCWVGRVAVW 317 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 38/138 (27%), Gaps = 11/138 (7%) Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL--DWVQEVQKRGAGEIVLNMMNQ 181 +V D T + + ++ + L + + GA I+++ Sbjct: 201 DMVSSDDRTQYETTLTWSYIKELKKKTNMEIWLKGILTGEDAEMAVNAGADGIIVSNHGG 260 Query: 182 DGV-RNGYDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAAS-----V 233 + L+ L V + +P+ GG +A D + Sbjct: 261 RQLDGALSTLDALPDVVAAVNGRIPVHIDGGIRRGSDIFKAL-ALGADHCWVGRVAVWGL 319 Query: 234 FHKQIINIGELKAYLATQ 251 +K + L + Sbjct: 320 AYKGEEGVSIALNILHDE 337 Score = 43.3 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI 102 + + S++ + + ++ + G I + EDA ++ GAD I + Sbjct: 207 DRTQYETTLTWSYIKELKKKTNMEIWLKG-ILTGEDAEMAVNAGADGIIV 255 >UniRef50_B6KJZ7 Inosine-5'-monophosphate dehydrogenase n=4 Tax=Alveolata RepID=B6KJZ7_TOXGO Length = 551 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 43/162 (26%), Gaps = 11/162 (6%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + AK E GAD LV +S + V R+ + G + + A + Sbjct: 241 IERAKALQEAGADVLVV---DSSQGDSIYQVDLVKRLKAAFPELQIIGGNVVTARQAKSL 297 Query: 93 LSFGADKISINSPALADPTLI-------TRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + G D + I + + T + + V G + + Sbjct: 298 IDAGVDGLRIGMGSGSICTTQVVCAVGRAQATAVYHVCKYAREHGDLPCIADGGIQNSGH 357 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + ++ GE + + G Sbjct: 358 VMKALALGANAVMMGSMLAGTEEAP-GEYYFHNGVRVKTYRG 398 Score = 47.5 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 33/120 (27%), Gaps = 24/120 (20%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV------ 60 P L + G VV Q AK + G D L + S Sbjct: 278 FPELQIIGGNVVTARQ-------------AKSLIDAGVDGLRIGMGSGSICTTQVVCAVG 324 Query: 61 -----VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 E D+P GGI++ K L+ GA+ + + S Sbjct: 325 RAQATAVYHVCKYAREHGDLPCIADGGIQNSGHVMKALALGANAVMMGSMLAGTEEAPGE 384 Score = 47.2 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 52/175 (29%), Gaps = 23/175 (13%) Query: 85 SLEDAAKILSFGADKISINSP---ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 +E A + GAD + ++S ++ L+ RL F I+ G Sbjct: 240 DIERAKALQEAGADVLVVDSSQGDSIYQVDLVKRLKAAFPELQIIGGNVVTARQAKSLID 299 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH 201 G T V V + A + K RE Sbjct: 300 AGVD-GLRIGMGSGSICTTQVVCAVGRAQATAV---------------YHVCKYAREHGD 343 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 +P IA GG H ++A + + S+ GE Y GV ++ Sbjct: 344 LPCIADGGIQNSGHVMKAL-ALGANAVMMGSMLAGTEEAPGE---YYFHNGVRVK 394 >UniRef50_B5FFW2 Putative imidazole glycerol phosphate synthase subunit hisf2 n=1 Tax=Vibrio fischeri MJ11 RepID=B5FFW2_VIBFM Length = 214 Score = 54.5 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 66/216 (30%), Gaps = 13/216 (6%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDK-SWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + E DE+ D + K + P GGI+++E + Sbjct: 7 VINSLEEYQCDEIAIIRPVRKKDSLDIFKKDIIELQRLKTMTPVSFGGGIRTIEHLNSLN 66 Query: 94 SFGADKISINSPAL-ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + +++ +S L + LI + D FG Q I + E + + + Sbjct: 67 NLPIERLIFSSAFLDENKELIGKAKDLFGHQAIQCLLPLLRKKEELFVYHSSLSDYVPIK 126 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGT 212 + + EI+L +G N +D + V +I SGG G Sbjct: 127 EINIEFINELAN--------EIILIDTKNEGKENKFDWSLIDDVPFDWK-KIIISGGIGK 177 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + L + +I LK + Sbjct: 178 SCIAEAHKKKL--ASVLIDNKVLHTEYSISGLKHAI 211 >UniRef50_C8WL92 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WL92_EGGLE Length = 353 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 37/117 (31%), Gaps = 8/117 (6%) Query: 30 GDIVPLAKRYAEEGADELVFYD-----ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 D + AK A GA + DG ++ R+A ID+P + GG + Sbjct: 232 DDSIEAAKLLAAHGASAIEVSGNWRNCRVRDFDGEPFFAAYAQRLARAIDVPVILTGGNR 291 Query: 85 SLEDAAKIL---SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 S E ++ + P + +P L R + V D Sbjct: 292 SFEAMDRLAVESEGRIAGFGLCRPLICEPRLARRWRVDPQAKPRCVSCDKCSTMPGH 348 >UniRef50_A8VXV8 Tryptophan synthase alpha chain n=2 Tax=Bacillus RepID=A8VXV8_9BACI Length = 266 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 73/246 (29%), Gaps = 41/246 (16%) Query: 21 VQFRNHEIIGDI-----VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI 75 +F + + D V +A + G + + G D Sbjct: 14 KRFVPYMMSSDPTPDLSVEIALMLQDAGVEAI--------EWGVPYSDPL-------ADG 58 Query: 76 PFC--------VAGGIKSLEDAAKILSFGADKISINSPALA--DPTL---ITRLADRFGV 122 P GG ++ K+ A +++ S +P L T+L + Sbjct: 59 PVIQQAGQRALKNGGSLTV-SLQKMKEARAKGLTVPSVLFTYVNPVLSYGFTKLIEELKD 117 Query: 123 QCIVV--GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 D Y+ + + G + + ++ + + Sbjct: 118 YGFDGLLIPDLPYEESHEYRALCREKGISLIPLIAPSSKSRVEKITKEADGFVYYVTSLG 177 Query: 181 QDGVRNGYDL---EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 G R + E++ V+ VP++A G T EH DGA+ S ++ Sbjct: 178 VTGTRESFSETLKEEINTVKSFSKVPVLAGFGISTPEHVQYFQEH--ADGAIVGSALVRK 235 Query: 238 IINIGE 243 I ++ + Sbjct: 236 IASLED 241 >UniRef50_Q5V138 Indole-3-glycerol phosphate synthase n=7 Tax=Halobacteriaceae RepID=TRPC_HALMA Length = 271 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 62/216 (28%), Gaps = 39/216 (18%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 + E D V LA++ E GA L +T + + RV E +D+P I Sbjct: 62 DGERADDPVDLAQQMVEGGAAALSV--LTEPDHFGGS-TATLERVREAVDVPVLRKDFIL 118 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + AD I + L D D + Sbjct: 119 HENQLDVV---EADVILLIVRFLE--------------------ADGTDDLADLLTAARE 155 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP- 203 T E V++ GA I +N D DL + V +P Sbjct: 156 RGFQVLVETHTAAE----VEKALDAGADIIGVNNR--DLGELAVDLGTFEAV--APDIPE 207 Query: 204 ---LIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 LIA G T + RDA D L S Sbjct: 208 DVTLIAESGIQTADDVTRM-RDAGADALLIGSAIMD 242 >UniRef50_C1KVS7 Indole-3-glycerol phosphate synthase n=28 Tax=Bacilli RepID=TRPC_LISMC Length = 252 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 63/223 (28%), Gaps = 41/223 (18%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + V AK Y GA + G + D + VA+ ++IP I S + Sbjct: 64 NPVLQAKSYQAAGAGMISVLTDPVFFKGSIED---LREVAKNVEIPVLCKDFIISEKQLI 120 Query: 91 KILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + + GA + + AL + LI A ++ +V D A Sbjct: 121 RARNAGATVVLLIISALTEEMLIALFEQALALDLEVLVEVHDQKELAV------------ 168 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVRE--VCHVPLIA 206 QK GA I +N N D+ +++ I+ Sbjct: 169 -----------------AQKIGAKLIGVNNRN--LHTFEVDIAVSERLASDFSSDACFIS 209 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G T E + + L + L Sbjct: 210 ESGFRTAEDVARVSQKYNA--VLVGEALM-REATPEAAAKSLK 249 >UniRef50_P96192 tRNA-dihydrouridine synthase C n=1 Tax=Azotobacter vinelandii RepID=DUSC_AZOVI Length = 309 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 41/152 (26%), Gaps = 9/152 (5%) Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 GA I +N A + + A D R Sbjct: 88 GAPAIDLNFGCPAKTSTARGADGCCSTSRNCCMPSSARCA-GPCRRCAGDRQDAPGVRPA 146 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIAS--GGAGT 212 + + + + G +V++ + E L +VRE VP+ A+ G Sbjct: 147 RGRPG-VRRALVEGGVAHLVVHARTKVEGYRPPASWEWLARVREAVAVPVYANRKSGRRR 205 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + + V+ + + ++ Sbjct: 206 IG----CREISGVEDVMLGCGLVSRPDLARQI 233 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 4/85 (4%) Query: 37 KRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS- 94 + E G LV + T W++RV E + +P KS Sbjct: 154 RALVEGGVAHLVVHARTKVEGYRPPASWEWLARVREAVAVPVYANR--KSGRRRIGCREI 211 Query: 95 FGADKISINSPALADPTLITRLADR 119 G + + + ++ P L ++A R Sbjct: 212 SGVEDVMLGCGLVSRPDLARQIAMR 236 >UniRef50_D1JFH0 Dihydroorotate dehydrogenase electron transfer subunit/dihydroorotate dehydrogenase n=1 Tax=uncultured archaeon RepID=D1JFH0_9ARCH Length = 589 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 29/102 (28%), Gaps = 23/102 (22%) Query: 29 IGDIVPLAKRYAEEGADELV----FYDI--------------TASSDGRVVDK-----SW 65 +GD LA + GAD + T D Sbjct: 452 VGDPAGLAMTLEKAGADAITAINTVIARPVDNRLDTHILGNPTGYGGKSGKDLTVGGKEI 511 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 V + + + IP GGI S +D GA + S + Sbjct: 512 VFNLYKELKIPIIAVGGIFSAKDVIDYAKNGASMFQVGSALV 553 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 68/212 (32%), Gaps = 36/212 (16%) Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 A+ D+P ++ K++E+ ++ A K I+ + ++ I Sbjct: 373 AKYADVPLILSIFGKNVEECREVAKI-ATKYPIDMLEFNASCPHSDFVAVENQPKLLRSI 431 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV----LNMMNQD--- 182 A + + ++K GA I + D Sbjct: 432 IKEIRAIVHPKPIAVKISPNVG------DPAGLAMTLEKAGADAITAINTVIARPVDNRL 485 Query: 183 -----------GVRNGYDL-----EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 G ++G DL E + + + +P+IA GG + + ++ ++ Sbjct: 486 DTHILGNPTGYGGKSGKDLTVGGKEIVFNLYKELKIPIIAVGGIFSAKDVIDYAKN-GAS 544 Query: 227 GALAASVFHKQIINI-----GELKAYLATQGV 253 S + + I ELKAYL +G Sbjct: 545 MFQVGSALVSEDLEIFSTIKKELKAYLGAKGY 576 >UniRef50_B0SFJ9 Indole-3-glycerol-phosphate synthase n=3 Tax=Leptospira biflexa serovar Patoc RepID=B0SFJ9_LEPBA Length = 258 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 65/206 (31%), Gaps = 36/206 (17%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK Y GA + + G + D VA + +P I + Sbjct: 65 PVEIAKLYETSGAGAISVLTDQSYFFGSLNDLE---SVANQVSLPVIRKDFILDPIQIDE 121 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 ++GA I + L P+L+ L + + V ++T + E Sbjct: 122 AYAYGASAILLIVRIL-SPSLLKSLHEHANRLGLAVLVETHNELEVN------------- 167 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI--ASGG 209 GA I +N + D + + ++++ +I A G Sbjct: 168 -------------LALDAGANTIGINTRDLDTFQIHKN--LIEEIAPKLDPSIIRVAESG 212 Query: 210 AGTMEHFLEAFRDADVDGALAASVFH 235 + E + + +D L + F Sbjct: 213 IESYEDWQKYRGM--IDSMLVGTFFM 236 >UniRef50_Q465F6 Indole-3-glycerol phosphate synthase n=3 Tax=Methanosarcina RepID=Q465F6_METBF Length = 268 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 25/231 (10%), Positives = 53/231 (22%), Gaps = 34/231 (14%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 LA E GA + G + + V + +P I Sbjct: 66 RDISPAKAAELAWEMEEAGAVAISVLTEPGVFRGSLENLD---SVRNKVCLPILRKDFII 122 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + S + I LA + GV+ +V + K Sbjct: 123 DKLQLEEAQSDLV--LLIAGILGEQLGNFVELALKKGVEPLVEVHNRKELDLALKTDTRV 180 Query: 145 YTGDESRTRVTQWET---LDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH 201 + + + +++ +++ Sbjct: 181 IGINNRDLETLEINLGTTEELAPIIRECDLDHGTRHLI---------------------- 218 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 I+ G ++ + A D L S + + K ++ G Sbjct: 219 ---ISESGMNSVRDVRRVIQ-AGADAVLIGSALMENASVFDKTKEFVQGAG 265 >UniRef50_Q8TXQ6 tRNA-dihydrouridine synthase n=1 Tax=Methanopyrus kandleri RepID=Q8TXQ6_METKA Length = 244 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 47/174 (27%), Gaps = 14/174 (8%) Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISI--NSPALADPTLITRLADRFGVQCIVVGID 130 ++IP V +A ++ AD + + + P ++ A + D Sbjct: 62 VEIPVAVNVRFADPREAGELSGELADLVDVVEINAHCRQPEIVRAGAGE------ALLED 115 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 E + + R D ++ ++ + ++ Sbjct: 116 RTRLIEIVEAVAEHDVYVSVKLRGPHPAFEDALEALRDSSVDVLHVDA----MKPGEPTY 171 Query: 191 EQ-LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 E + VP+I + T E F A + ++ E Sbjct: 172 ELEYVRAAARVGVPVIGNNSVRTPEDVDRMFE-AGASAVSVGRPILEGDWDVLE 224 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 10/105 (9%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIP 76 VK H D + + D L A G + +V A + +P Sbjct: 135 VKLRG--PHPAFEDALE---ALRDSSVDVLHV---DAMKPGEPTYELEYVRAAAR-VGVP 185 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +++ ED ++ GA +S+ P L + R+ Sbjct: 186 VIGNNSVRTPEDVDRMFEAGASAVSVGRPILEGDWDVLERLVRYT 230 >UniRef50_C0W0L6 Indole-3-glycerol-phosphate synthase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0L6_9ACTO Length = 290 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 65/227 (28%), Gaps = 35/227 (15%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 +N + D +A Y GA + G D RV + +DIP I Sbjct: 65 KNLHPLTDPGRVAVEYENGGASIISCVTEKNFFGGSNADL---CRVRKCVDIPVLQTDFI 121 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 S + GAD + + L L + + + Sbjct: 122 ISPYQILEARVNGADMVLLTVGLLNQAQLESFIERTESLGMTA----------------- 164 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 V L+ + + GA I +N N D ++ ++ ++ Sbjct: 165 ---------LVEVESRLELLTAL-DAGAKVIGVNARN--LQTQELDCYKMAEIFDIVPAE 212 Query: 204 L--IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + +A+ G + +E + D + + ++ + Sbjct: 213 VTAVAAAGVQGPKEIIEYAK-MGADAIMVGEALLRSPNITARMQELV 258 >UniRef50_C8SAQ9 CO dehydrogenase/acetyl-CoA synthase, delta subunit n=3 Tax=Archaea RepID=C8SAQ9_FERPL Length = 455 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 13/141 (9%) Query: 1 MLAKRIIPCLDVRDGQ--VVKGVQFRNHEIIGDIVPLAKRYAEE-GADELVFYDI--TAS 55 M +I +DV D + + K V+ +++ D A++ E GAD + + I Sbjct: 166 MPHLPVI-AIDVFDRRPMLAKAVREHYEDVLDDPAEWARKAVREFGADLVTLHLISTDPL 224 Query: 56 SDGRVVDKSW--VSRVAEVIDIPFCVAGG---IKSLEDAAKILS-FGADKISINSPAL-A 108 D R ++ V V + + +P + G K E K +++ + S L Sbjct: 225 LDDRPASEAAKTVEEVLQAVKVPLIIGGSGNKEKDPEVLEKAAEVAEGERVMLASATLDM 284 Query: 109 DPTLITRLADRFGVQCIVVGI 129 D I A ++G + Sbjct: 285 DWERIGNAAKKYGHVVLSWTQ 305 >UniRef50_B1ZS75 2-nitropropane dioxygenase NPD n=2 Tax=Bacteria RepID=B1ZS75_OPITP Length = 363 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 11/88 (12%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----------DLEQLKKVREVCHVPLIAS 207 T+D +++ G +V + + G R + + ++ + VP+IA+ Sbjct: 162 TTVDEAVALERAGIELVVASGSDAGGHRPSFLRAAGESLVGTFSLIPQIVDAVSVPVIAA 221 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFH 235 GG A DGA + F Sbjct: 222 GGIADGRGVAAALM-LGADGAQVGTAFL 248 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 30/91 (32%), Gaps = 12/91 (13%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDK-----------SWVSRVAEVIDIPFCVA 80 V A G ELV + + R S + ++ + + +P A Sbjct: 163 TVDEAVALERAGI-ELVVASGSDAGGHRPSFLRAAGESLVGTFSLIPQIVDAVSVPVIAA 221 Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPT 111 GGI A L GAD + + LA Sbjct: 222 GGIADGRGVAAALMLGADGAQVGTAFLACDE 252 >UniRef50_C1XIL7 NADH:flavin oxidoreductase n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XIL7_MEIRU Length = 775 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 38/108 (35%), Gaps = 6/108 (5%) Query: 30 GDIVPLAKRYAEEGADELVFYDI-----TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 D V +A+ + E G D + GR+ + R+ + I G I Sbjct: 643 DDAVEIARLFKEAGCDLIDVSSGQTTRQARPVYGRMYQTPFADRIRNEVGIATMAVGAIY 702 Query: 85 SLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + I++ G AD +I P LADP A R G I Sbjct: 703 EADHVNSIIAAGRADLCAIARPHLADPHWTLNQAARLGYTEISWPKQY 750 >UniRef50_C9MVS9 tRNA dihydrouridine synthase A n=2 Tax=Leptotrichia RepID=C9MVS9_9FUSO Length = 332 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 50/165 (30%), Gaps = 14/165 (8%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 + + +A P + + GK + + Sbjct: 102 VSGNMMGAYLMAFPEEVANIVKSMKDATGKPVSVKHRIGIDGKNVLPNSFKRTLLDK--Y 159 Query: 157 WETLDWVQEVQKRGAGEIVLNMM-------NQDGVRNGYDL---EQLKKVREVCHVPLIA 206 + +++ ++ G + +++ + R+ L E + ++ + + Sbjct: 160 EDMENFISITKQAGVSKYIIHARIAILAGLDPKQNRSIPPLRYDEVYRVKKDNPDLHIEI 219 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +GG T+E E + VD A+ + + + E Y + Sbjct: 220 NGGIKTVEEIDEHLKY--VDSAMLGREIYDNPMILTEFGKYYGKE 262 >UniRef50_C0D995 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D995_9CLOT Length = 663 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 60/191 (31%), Gaps = 21/191 (10%) Query: 35 LAKRYAEEGADELVF----------YDITAS-SDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 + + E GAD + I AS + + + + IP G + Sbjct: 322 MLRDMEEMGADAIHLSNGMYGVRSSLGIVASFFQHHGWNADFAAEAKRFLKIPVITVGRV 381 Query: 84 KSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 A I+ G AD +++ +LADP + A + T + Sbjct: 382 SDPCMAEDIIVSGKADFVAMGRASLADPHWPEKAASG--RCNDIRQCIGCLQGCTASTYQ 439 Query: 143 NQYTGDESRTRVTQWETLDW-----VQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVR 197 + LD+ V+++ GAG I + G+ +E +K R Sbjct: 440 GVPIYCMVNPELGHEYELDYSKAPAVKKLYIVGAG-IAGMEAARGAALRGHQVELFEK-R 497 Query: 198 EVCHVPLIASG 208 I++ Sbjct: 498 NTVGGQFISAS 508 Score = 41.0 bits (95), Expect = 0.039, Method: Composition-based stats. Identities = 11/100 (11%), Positives = 30/100 (30%), Gaps = 11/100 (11%) Query: 156 QWETLDWVQEVQKRGAGEIVLNM-----MNQDG------VRNGYDLEQLKKVREVCHVPL 204 E+ ++++++ GA I L+ + G +G++ + + + +P+ Sbjct: 316 MCESRQMLRDMEEMGADAIHLSNGMYGVRSSLGIVASFFQHHGWNADFAAEAKRFLKIPV 375 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 I G + D + Sbjct: 376 ITVGRVSDPCMAEDIIVSGKADFVAMGRASLADPHWPEKA 415 >UniRef50_UPI000186E4C9 tRNA-dihydrouridine synthase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E4C9 Length = 622 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 23/218 (10%), Positives = 57/218 (26%), Gaps = 13/218 (5%) Query: 37 KRYAEEGADEL---VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG---IKSLEDAA 90 + E GAD + + + R + G I + Sbjct: 292 RICKEFGADVTCSETVVA-NSILQSQPFEWLLTKRHETEELFGIQLFGNNPFIMTRCGQL 350 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 D I I + D + R + VV + + Sbjct: 351 LEEKTNVDFIDICIGSPNDTMVRPRGTTSQVRREKVVETIVRCLSRVS--SLPLTVTTRL 408 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH-VPLIASGG 209 + + ++ + + + N++ + D + + + + V + Sbjct: 409 GDYSDEKISNKFLPNYKSCEISLLTVQGRNRETKQM--DWKYVNDLAQKVSPVKVYGLSD 466 Query: 210 AGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELKA 246 + +L+ + ++ G L + + ELK Sbjct: 467 VFSYTDYLDIQENYPNLSGVLLSRGALVKPWIFSELKE 504 >UniRef50_Q2NFE8 TrpC n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NFE8_METST Length = 263 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 64/217 (29%), Gaps = 36/217 (16%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + Y + D + + + + + + + P I + Sbjct: 76 DVIPIYDKNNVDMMSILTEETYFKSNLKNFNIANNL---TNKPLLRKDFIIDEYMIYEAA 132 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 A I + S + ++ G+ +V Sbjct: 133 VNNASGILLISGICPNIEEYLNISRNLGLDAVVECH------------------------ 168 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 TL+ ++ V I +N N D +L+ K++++ LI+ G T+ Sbjct: 169 -----TLEDIESVVDYNPEIIGINNRNLDDFT--INLKTTKELKKYVPNYLISESGVKTI 221 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 E + ++ DG L + + E++ ++ Sbjct: 222 EDAKK-LKEYGADGILIGTSILQNN-TEKEIEKFIEN 256 >UniRef50_A9W195 Dihydrouridine synthase DuS n=41 Tax=Bacteria RepID=A9W195_METEP Length = 354 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 56/200 (28%), Gaps = 24/200 (12%) Query: 74 DIPFCVAGGIKSLEDAAKIL----SFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + + G + +D A FG +I++N +D R + +VG Sbjct: 83 PLAVQLGG--SNPDDLAAAARIAADFGYAEINLNVGCPSDRVQDGRFGACLMREPGLVGA 140 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWE--TLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 A V E V G +V++ Sbjct: 141 --CVAALKAAVPVPVTVKCRLGVDDQDIEEALDAVADAVVAAGGDGLVVHARKAWLKGLS 198 Query: 188 Y---------DLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDAD-VDGALAASVFHK 236 D ++ +++ +P+ +GG A VDG + + Sbjct: 199 PRENRDVPPLDYGRVARLKRAHPDLPIAVNGGI---ADIAAAKARLGEVDGVMIGRAAYT 255 Query: 237 QIINIGELKAYLATQGVEIR 256 + + ++ A L + + Sbjct: 256 EPALLLDVDAELFGEPAPVA 275 >UniRef50_C7LZ72 Indole-3-glycerol-phosphate synthase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ72_ACIFD Length = 271 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 56/230 (24%), Gaps = 37/230 (16%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + E D+ Y GA + T G + D R A+ +++P Sbjct: 62 KGWFVEPETDVATRVSAYERAGAVAVSVLTDTPHFGGTLADLE---RAAQHVELPIVRKD 118 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I + + GA + + + AL + + V V+ Sbjct: 119 FIVDARELLRARRAGASAVLLIAAALQPEEVASLAGVAHDVGLEVLLEIHELSELELAEL 178 Query: 142 VNQYTGDESRTRVT--QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 ++ +T + +T + + G L Sbjct: 179 AAADVVGVNQRDLTSFRVDTDRARRVLAALPPGAARL----------------------- 215 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 A G + DG L + ++A + Sbjct: 216 ------AESGVRGPDDLAGLV---GFDGVLIGEACMRARDPYATVRALVE 256 >UniRef50_A4T8N9 2-nitropropane dioxygenase, NPD n=9 Tax=Mycobacterium RepID=A4T8N9_MYCGI Length = 340 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 10/82 (12%) Query: 36 AKRYAEEGADELVFYDITA----------SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 A+ A+ G D L +A + + ++RV + +P AGGI Sbjct: 156 ARAAADVGVDVLTVQGPSAGGHRGTFDATARPSDIALDDLIARVTAAVGLPVVAAGGIMD 215 Query: 86 LEDAAKILSFGADKISINSPAL 107 D ++ GA + + L Sbjct: 216 AADIRRVRDAGAVAAQLGTAFL 237 Score = 51.8 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 27/83 (32%), Gaps = 11/83 (13%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYDL----------EQLKKVREVCHVPLIASGGAGT 212 + G + + + G R +D + + +V +P++A+GG Sbjct: 156 ARAAADVGVDVLTVQGPSAGGHRGTFDATARPSDIALDDLIARVTAAVGLPVVAAGGIMD 215 Query: 213 MEHFLEAFRDADVDGALAASVFH 235 RDA A + F Sbjct: 216 AADIRRV-RDAGAVAAQLGTAFL 237 >UniRef50_C5R8W8 Dihydroorotate dehydrogenase B, catalytic subunit n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R8W8_WEIPA Length = 323 Score = 54.1 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 21/114 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYD---------------ITASSDG------RVVDKSWVS 67 + DI PLA GAD L + + G + + Sbjct: 174 VTDIKPLAVTAENAGADGLTMVNTLVGMSLDLQSRSARLYRGKGGLSGEALHPLAVELIW 233 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 A + IP GG+ S++DA +++ GA + + D + +L D Sbjct: 234 EAASAVHIPIIGVGGVSSIDDALELMMAGASAVQVGVMNSIDKLCLPKLIDALP 287 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 1/43 (2%) Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +E + + H+P+I GG +++ LE A Sbjct: 228 AVELIWEAASAVHIPIIGVGGVSSIDDALELMM-AGASAVQVG 269 >UniRef50_Q6CF62 YALI0B09999p n=1 Tax=Yarrowia lipolytica RepID=Q6CF62_YARLI Length = 344 Score = 54.1 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 21/190 (11%), Positives = 55/190 (28%), Gaps = 20/190 (10%) Query: 66 VSRVAEVIDIP----FCVAGGIKSLED-------AAKILSFGADKISINSPALADPTLIT 114 + + + P V G+ E K + ++ A + P+ + Sbjct: 51 IEEIKKETSKPFGINLFVTKGVPDYESVVSSDKSILKAIETVYASADVSFSAPSYPSCVP 110 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + + ++ + + ++ GA + Sbjct: 111 PFDKQLEAVLQNPPPIVSFTFGIISADQVEQLHAKNIIVIGTATNREEAVSWKQAGADAV 170 Query: 175 VLNMMNQDGVR---------NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 VL G R + + L++L + + +P+I +GG T++ ++ V Sbjct: 171 VLQGREAGGHRGTWIGPEKDSLFKLDELIEATKDVDIPIIPAGGVATIQRAKVLQQNPRV 230 Query: 226 DGALAASVFH 235 + Sbjct: 231 LAVTVGTALL 240 >UniRef50_UPI00006A2AD3 UPI00006A2AD3 related cluster n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A2AD3 Length = 322 Score = 54.1 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 3/90 (3%) Query: 21 VQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW---VSRVAEVIDIPF 77 + V A + + GAD +V A + D + V + + + IP Sbjct: 109 RHGMAWVHVAPAVRFAHKAEQLGADAVVLVGFEAGGHPGMDDIALSVLVRKASAELTIPV 168 Query: 78 CVAGGIKSLEDAAKILSFGADKISINSPAL 107 AGGI L++GA+ + I + + Sbjct: 169 IAAGGICDGRSMVAALAWGAEGVQIGTRFV 198 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 50/182 (27%), Gaps = 32/182 (17%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 D R + ++R + D P V I + A+ + D L Sbjct: 43 GCFDSRAELAAEITRARSLTDRPVGVNISIGTRRSMAEFVDCLCD-------------LD 89 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 R+ G + + + + ++ GA Sbjct: 90 VRIVFTSGHNPAPFVAQIKRHGMAWVHVAP---------------AVRFAHKAEQLGADA 134 Query: 174 IVLNMMNQDGVRNGYDLEQ---LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 +VL G D+ ++K +P+IA+GG + A +G Sbjct: 135 VVLVGFEAGGHPGMDDIALSVLVRKASAELTIPVIAAGGICDGRSMVAAL-AWGAEGVQI 193 Query: 231 AS 232 + Sbjct: 194 GT 195 >UniRef50_B7CB02 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7CB02_9FIRM Length = 651 Score = 53.7 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 74/219 (33%), Gaps = 24/219 (10%) Query: 24 RNHEIIGDIVPLAKRYAEE--------GADELV---FYDITASSDGRVVDKSWVSRVAEV 72 + D++ K+ G D++ + IT + + + + + ++ E Sbjct: 232 DDSIDFEDVLYFLKKAQNYVDTVQVSSGIDKIFESNIHCITTNLEEVMPNLKYAKKIKEE 291 Query: 73 IDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 +DIP + I + + A +I++ G D ++ LADP + + + Sbjct: 292 LDIPVSMVSAILTPKMADEIIAKGYVDMVAFGRSLLADPYWPKKAMQGHPEDIVPCLRCS 351 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR------ 185 + + + + + + ++ +V+ G++ Sbjct: 352 NCYHIATDHWNVGCSVNPRYHNEDFIPSNRCIGKAIEK--KHVVIIGAGPAGLKAAITAS 409 Query: 186 -NGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRD 222 G+D+ ++K + + +IAS E + Sbjct: 410 DRGHDVTLIEKSNSLGGLLKVIASE--KHKEEVQRLLKY 446 >UniRef50_Q1GF08 L-lactate dehydrogenase (Cytochrome) n=10 Tax=Rhodobacteraceae RepID=Q1GF08_SILST Length = 389 Score = 53.7 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 1/71 (1%) Query: 36 AKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 A R GAD + + D + + +P + GI+ D + L+ Sbjct: 271 APRLEAAGADAIWISNHAGRQFDAAPAPIEVLEDIRAATTLPLILDSGIEGGLDILRALA 330 Query: 95 FGADKISINSP 105 GAD + + Sbjct: 331 LGADFVMLGRA 341 Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 2/75 (2%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 ++ GA I ++ +E L+ +R +PLI G L A Sbjct: 271 APRLEAAGADAIWISNHAGRQFDAAPAPIEVLEDIRAATTLPLILDSGIEGGLDILRAL- 329 Query: 222 DADVDGALAASVFHK 236 D + +H Sbjct: 330 ALGADFVMLGRAWHY 344 >UniRef50_C1XX24 Fructose-bisphosphate aldolase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XX24_9DEIN Length = 316 Score = 53.7 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 13/221 (5%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGAD-ELVFYDITASSDGRVVDKSWVSRVAE 71 R+G V N E I+ A E GA L D G + V +A Sbjct: 15 REGYAVPSFNTNNLETTQAILETA---EEVGAPVFLQISDGARKYAGLENLANLVRDMAS 71 Query: 72 VIDIPFCVAGG-IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + +P + + L G + I++ +A+ + Sbjct: 72 RVSVPVVLHLDHGADYTMVLQALRAGFTSVMIDAS---HHPFEENVAETRRCVEAAHAVG 128 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--- 187 +AE G+ + + + + V + G + + + G G Sbjct: 129 VSVEAELGRLQGIEDNIAVDEREAFLTDPEEAQRFVAETGIDYLAVAIGTSHGAYKGKGR 188 Query: 188 --YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 D +L+++ +PL+ G +G + + R D Sbjct: 189 PYIDHARLQQIARRVSLPLVLHGSSGVPQWLKDKMRATGAD 229 >UniRef50_D2RDD9 Photosystem I assembly BtpA n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RDD9_ARCPR Length = 249 Score = 53.7 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 69/229 (30%), Gaps = 45/229 (19%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWV------------SRVAEV 72 + + + AK AE G D ++ + G V V Sbjct: 21 YEKTFENALKDAKALAE-GCDAIII-----ENYGDKPFLKEVDRVTVACMSVIAWEVKRE 74 Query: 73 IDIPFCVA---GGIKSLEDAAKILSFGADKISINS----PALADPTLITRLADRFGVQCI 125 +P + S AK ++ AD + +N + L + + + Sbjct: 75 TGLPVGINVLRNDPFSALAIAKAVN--ADFVRVNQLYFASLSPEGFLEGKAGEILRYRRF 132 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + Y + + D+++ V++ A +++ Sbjct: 133 IDCKA------------KIYADVKVKHAHHFVSLEDYLENVERCLADALIVTGTA---TG 177 Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 D+E+LK VR + ++P+ G E+ DG + + F Sbjct: 178 REVDVEELKAVRNLTNLPVFVGSGVK-PENLHRYVGL--CDGVIVGTYF 223 >UniRef50_B8FCV2 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCV2_DESAA Length = 373 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 11/124 (8%) Query: 31 DIVPLAKRYAEEGADELVFYDITAS---------SDGRVV-DKSWVSRVAEVIDIPFCVA 80 D +P A+ + GA L + + + V + ++IP A Sbjct: 230 DSLPYARALEKAGAAYLSVSGGSWESFMVPEVLIKSIQPCYMVDLAAAVKKEVEIPVIAA 289 Query: 81 GGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 G I+ A +IL G AD I + P ADP + ++ + I Sbjct: 290 GRIQEGAVAERILLEGKADLIGLARPLWADPGWLEKVRHDREDEIIPCSPSCGDTCMQLV 349 Query: 140 YHVN 143 Sbjct: 350 MSFK 353 Score = 43.3 bits (101), Expect = 0.008, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 55/199 (27%), Gaps = 22/199 (11%) Query: 78 CVAGGIKSLEDAAKILSFGADKISINSPA------LADPTLITRLADRFGVQCIVVGIDT 131 G K E A + G D + ++ P + R + G + Sbjct: 138 IAHVGDKFAEAAVRAKKAGFDVVELHGATGYLLSQFISPWVNRRTDEYGGSLDNRMRFGL 197 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDW------VQEVQKRGAGEIVLNMMNQDGVR 185 + + G E L+ + ++K GA + ++ + + Sbjct: 198 EVLKKVRDAVGDMPVGFRFMAHEWLPEGLELVDSLPYARALEKAGAAYLSVSGGSWESFM 257 Query: 186 NG----------YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 Y ++ V++ +P+IA+G + D A Sbjct: 258 VPEVLIKSIQPCYMVDLAAAVKKEVEIPVIAAGRIQEGAVAERILLEGKADLIGLARPLW 317 Query: 236 KQIINIGELKAYLATQGVE 254 + +++ + + Sbjct: 318 ADPGWLEKVRHDREDEIIP 336 >UniRef50_C9KQV9 NADH:flavin oxidoreductase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQV9_9FIRM Length = 368 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 4/130 (3%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITAS---SDGRVVDKSWVSRVAEVI-DIPFCV 79 D+V L +R G + + F + + V R++ + D+P + Sbjct: 223 DAEGYHRDMVWLLRRAKALGVELVEFSGVDFINLPKTATLYYLPQVKRLSAEVPDMPLSL 282 Query: 80 AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 GG++SL D ++ G + +S+ +A+P +T+ V + Sbjct: 283 VGGVRSLADMEAVIKAGIECVSLGRSLIAEPDFVTKELAGGEKSICVSCSRCFVLPHMHP 342 Query: 140 YHVNQYTGDE 149 + + Sbjct: 343 GIRCVWAWKK 352 Score = 44.8 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 23/185 (12%), Positives = 59/185 (31%), Gaps = 21/185 (11%) Query: 86 LEDAAKILSFGADKISINSPA------LADPTLITR-------LADRFGVQCIVVGIDTW 132 +E A ++ S G D + +++ DPT R + +RF + ++ Sbjct: 144 IEAAKRLQSAGCDGVQLHAAHSYLLSRFIDPTFNQREDEYGGTIENRFRMVEEIICGIHG 203 Query: 133 YDAETGKYHVNQYTGDE-SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 + + + + + ++ + G + + ++ + L Sbjct: 204 ACGKDFPVLIKVNVDTKAEDAEGYHRDMVWLLRRAKALGVELVEFSGVDFINLPKTATLY 263 Query: 192 QLKKVR----EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 L +V+ EV +PL GG ++ + A ++ + + K Sbjct: 264 YLPQVKRLSAEVPDMPLSLVGGVRSLADMEAVIK-AGIECVSLGRSLIAEPDFVT--KEL 320 Query: 248 LATQG 252 + Sbjct: 321 AGGEK 325 >UniRef50_A4FBL7 Dihydroorotate dehydrogenase n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FBL7_SACEN Length = 338 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 22/99 (22%) Query: 31 DIVPLAKRYAEEGADELVFYD------------------ITASSDGR---VVDKSWVSRV 69 D + A+ A+ G L + GR + V+ + Sbjct: 208 DYLAHARLAAKHGVSALTAINTVKGLRLDPETGQPLLKNRFGGLSGRAIKPIGLRVVAEL 267 Query: 70 AEV-IDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 + + +P GGI++ +D + GAD +S+ S Sbjct: 268 RDAGVKLPIIATGGIRTFDDCREYFWAGADAVSLGSATW 306 Score = 42.2 bits (98), Expect = 0.017, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Query: 192 QLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + ++R+ +P+IA+GG T + E F A D S Sbjct: 263 VVAELRDAGVKLPIIATGGIRTFDDCREYFW-AGADAVSLGSA 304 >UniRef50_C8PYI7 N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYI7_9GAMM Length = 233 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 56/178 (31%), Gaps = 19/178 (10%) Query: 66 VSRVAEVIDIPFCVAGGIK--------SLEDAAKILSFGADKISINSPALADPTLITRLA 117 + + +++ G + + E A ++ ++ + + P Sbjct: 33 LEDITNAVNLGVDAVGFVFYEPSPRAVTPEQACELAKAVPAFTTVVALVVNMPEQELVYL 92 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGD----ESRTRVTQWETLDWVQEVQKRGAGE 173 IV E T + +QE++ GA Sbjct: 93 SHHVPFDIVQFHGDESPQECKLMADRINKRWIKALRISHDDTPETIVTQIQELKDFGACS 152 Query: 174 IVL---NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 ++L + G + +D E K+ + +P+I +GG T ++ EA +V G Sbjct: 153 VLLDAYHPDKFGGTGDSFDWE---KIPKHSPLPVILAGGL-TADNVGEAIAKTNVYGV 206 >UniRef50_C7HAV2 Dihydrouridine synthase family protein n=2 Tax=Faecalibacterium prausnitzii RepID=C7HAV2_9FIRM Length = 313 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 44/157 (28%), Gaps = 7/157 (4%) Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 ++ G ++++N + +D + DA + + Sbjct: 82 ELRRMGYTEVNLNFGCPSGTVTAKGKGSGMLRDP--QKLDAFLDAVFSQAGGSVSVKTRL 139 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGG 209 E + + K E+ ++ + G D E C P+ +G Sbjct: 140 G-VARAEEFGEILDVYNKYPLCELTIHPRVMKQLYRGQADREAFAAYLPACTAPVCYNGD 198 Query: 210 AGTMEHFLEAFRDA--DVDGALAASVFHKQIINIGEL 244 T++ A A ++ G + + + Sbjct: 199 VTTVDDL-RALEAAFPELSGIMVGRGLIADPALLRKA 234 Score = 48.3 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 43/160 (26%), Gaps = 7/160 (4%) Query: 14 DGQVVKGVQFR-NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE 71 VK E G+I+ + Y + EL + R D+ + Sbjct: 131 GSVSVKTRLGVARAEEFGEILDV---YNKYPLCELTIHPRVMKQLYRGQADREAFAAYLP 187 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGI 129 P C G + +++D + + I + +ADP L+ + + Sbjct: 188 ACTAPVCYNGDVTTVDDLRALEAAFPELSGIMVGRGLIADPALLRKAVGGPAASREELRG 247 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + SR + + + Sbjct: 248 YHDELYHGYTEAFGMASCAVSRMKAHWFYLIHLFDGADAL 287 >UniRef50_B4U1B5 Enoyl-[acyl-carrier-protein] reductase (FMN) n=263 Tax=Bacteria RepID=B4U1B5_STREM Length = 328 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 54/146 (36%), Gaps = 4/146 (2%) Query: 33 VPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V LAKR + G D ++ + G++ + V +V + + +P AGGI AA Sbjct: 120 VALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMTLVRQVVDAVSVPVIAAGGIADGRGAAA 179 Query: 92 ILSFGADKISINSPALADPTLITRLADR---FGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 GA+ + + + + + + + I I + N+ T Sbjct: 180 AFMLGAEAVQVGTRFVVAKESNAHQSFKDKILKAKDIDTVISAQVVGHPVRSIKNKLTSA 239 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEI 174 ++ ++++ GAG + Sbjct: 240 YAKAEKEFLADRKAASDIEEMGAGAL 265 Score = 50.2 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 49/146 (33%), Gaps = 4/146 (2%) Query: 90 AKILSFGADKI--SINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +++ D++ + P + L++ AD I G+ + Sbjct: 48 KEVVKANIDRVKAITDKPFGVNIMLLSPFADDIVDLVIEEGVKVVTTGAGNPGKYMERLH 107 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVREVCHVPLIA 206 + + ++ + ++K G ++ M G + +++V + VP+IA Sbjct: 108 EAGIIVIPVVPSVALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMTLVRQVVDAVSVPVIA 167 Query: 207 SGGAGTMEHFLEAFRDADVDGALAAS 232 +GG AF + + Sbjct: 168 AGGIADGRGAAAAFM-LGAEAVQVGT 192 >UniRef50_B0K0E3 NADH:flavin oxidoreductase/NADH oxidase n=12 Tax=Thermoanaerobacterales RepID=B0K0E3_THEPX Length = 612 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 43/149 (28%), Gaps = 12/149 (8%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYD---------ITASSDGRVVDKSWVSRVAEVID 74 I + V AK GAD L I+ G V R+ E + Sbjct: 205 DRGFTIEESVRFAKLLEYHGADALDISSGVSSTSEYHISPMGIGDKPLIGIVKRIKENVT 264 Query: 75 IPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP + S+ D K+L G AD I I + DP L +L + Sbjct: 265 IPVIAIDKLGSVYDWEKVLEDGIADFIGIARGFIGDPDLAEKLIKGHEED--IRYCIHCN 322 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDW 162 A V + + + Sbjct: 323 QACIAYIQKGLSVSCMINPEVGREKEFEV 351 Score = 44.1 bits (103), Expect = 0.005, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 48/126 (38%), Gaps = 12/126 (9%) Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM---------MNQDGVRNGYDLEQ 192 D + T E++ + + ++ GA + ++ ++ G+ + + Sbjct: 196 CRINGSDFTDRGFTIEESVRFAKLLEYHGADALDISSGVSSTSEYHISPMGIGDKPLIGI 255 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +K+++E +P+IA G++ + + D D A F +L + Sbjct: 256 VKRIKENVTIPVIAIDKLGSVYDWEKVLEDGIADFIGIARGFIGDPDLAEKL---IKGHE 312 Query: 253 VEIRIC 258 +IR C Sbjct: 313 EDIRYC 318 >UniRef50_A0AMC4 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=65 Tax=Bacteria RepID=NANE_LISW6 Length = 236 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 68/264 (25%), Gaps = 61/264 (23%) Query: 12 VRDGQVVKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 ++ G VV N + + +A + GA + R + + Sbjct: 9 IKGGLVVSCQALSNEPLHSSFIMSKMALAAVQSGAVGI-----------RANTTKDIKAI 57 Query: 70 AEVIDIPFCVAGGIK-------------SLEDAAKILSFGADKISIN--SPALADPTLIT 114 E +D+P GI + ++ +I GA ++++ + + Sbjct: 58 EEQVDVPII---GIFKNEYEGSEVFITPTYKEVKEICESGAQIVAMDATTRLRPHGEKLD 114 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + + + +L+ V+ G I Sbjct: 115 EIIKTVRKE------------------------FPNILLMADTSSLEDVKYADALGFDFI 150 Query: 175 VLNMMNQDGVRNGYD-----LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 + G + LK+V + P+IA G T E E + Sbjct: 151 GTTLYGYTEATTGKNISDNQFAYLKEVLKSTTTPIIAEGKIDTPEKAREVL-ALGCYSVV 209 Query: 230 AASVFHKQIINIGELKAYLATQGV 253 + + + Sbjct: 210 VGGAITRPQEITKRFINEMKKDHL 233 >UniRef50_Q55710 Thiazole synthase n=253 Tax=cellular organisms RepID=THIOG_SYNY3 Length = 656 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 7/90 (7%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEVIDIPFCVAGGIKSLED 88 D + LAKR E G + + + + + + E +P V GI + + Sbjct: 536 DPL-LAKRLEEVGCA--TVMPLGSPIGSGQGIRNAANIGIIIENAKVPVVVDAGIGTPSE 592 Query: 89 AAKILSFGADKISINSPALA--DPTLITRL 116 AA+ + GAD + INS +P + + Sbjct: 593 AAQAMEMGADAVLINSAIAMAANPVAMAQA 622 Score = 45.6 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 5/94 (5%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + +++ G ++ + G G + + + E VP++ G GT +A Sbjct: 539 LAKRLEEVGCATVMPLG-SPIGSGQGIRNAANIGIIIENAKVPVVVDAGIGTPSEAAQAM 597 Query: 221 RDADVDGALAASVF--HKQIINIGELKAYLATQG 252 D L S + + + G Sbjct: 598 E-MGADAVLINSAIAMAANPVAMAQAMGMATQAG 630 >UniRef50_UPI0001BCA063 tRNA-dihydrouridine synthase A n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BCA063 Length = 187 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 12/112 (10%), Positives = 36/112 (32%), Gaps = 12/112 (10%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD---------LEQLKKVR-EVCHVP 203 + E D+V +V + G ++ + + +++ + + Sbjct: 6 DSYAELSDFVGKVHEAGCESFTVHARIAILEGLSPKENRDIPPLRYDVVAQLKSDFPDLE 65 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 ++ +GG T++ E + DG + + + + L + Sbjct: 66 IVLNGGIKTLDQCGEHLQT--FDGVMLGREAYHNPYLLAHVDQQLFDSTAPV 115 Score = 45.2 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 11/93 (11%) Query: 34 PLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVI-DIPFCVAGGI 83 + E G + + A +G + V+++ D+ + GGI Sbjct: 13 DFVGKVHEAGCESFTVHARIAILEGLSPKENRDIPPLRYDVVAQLKSDFPDLEIVLNGGI 72 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRL 116 K+L+ + L D + + A +P L+ + Sbjct: 73 KTLDQCGEHLQT-FDGVMLGREAYHNPYLLAHV 104 >UniRef50_C6XGY7 tRNA-dihydrouridine synthase A n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGY7_LIBAP Length = 322 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 55/186 (29%), Gaps = 17/186 (9%) Query: 78 CVAGGIKSL-EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 I L E A + FG ++I++N + + + + + A Sbjct: 54 IGGADISKLVEAAKIVEDFGYNEINLNVGCPS--ARVHEGSFGACLMLNPDIVGDCIAAM 111 Query: 137 TGKYHVNQYTGDESRTRVTQ--WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY------ 188 + + V+ ++K G I ++ Sbjct: 112 CKALSIPVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKI 171 Query: 189 ---DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 D + + +++ E + + +GG M L+ VDG + +K + + Sbjct: 172 PNLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKIL--PSVDGVMIGRAAYKNSAMLTTV 229 Query: 245 KAYLAT 250 Y + Sbjct: 230 DEYFSN 235 >UniRef50_C7Q7H9 (S)-2-hydroxy-acid oxidase n=2 Tax=Actinomycetales RepID=C7Q7H9_CATAD Length = 678 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 7/82 (8%) Query: 32 IVPLAKRYAEEGADELVF--YD---ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 A+ GAD ++ + + + V+ VA P V GG++S Sbjct: 547 TAEDARLAVSYGADAIIVSNHGGRQLDGAVPSLTALPEVVAAVAGAC--PVMVDGGVRSG 604 Query: 87 EDAAKILSFGADKISINSPALA 108 DA L+ GA + + P L Sbjct: 605 GDAFAALALGAQAVFLGRPVLW 626 Score = 44.1 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 51/191 (26%), Gaps = 18/191 (9%) Query: 45 DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 + D A++ + +DIP + L D + G D ++N Sbjct: 447 AMVTLIDRAAAAGY--------RALVLTVDIPRMG----RRLRDMRNGFAVGPDCAAVNL 494 Query: 105 PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 A + R A + V T + T + + T + + Sbjct: 495 DAALMASAHLRGAGK--SALAVHTAQTIDPSVTWADLAWLRERSDLPLVLKGILTAEDAR 552 Query: 165 EVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFR 221 GA I+++ + L L +V P++ GG + A Sbjct: 553 LAVSYGADAIIVSNHGGRQLDGAVPSLTALPEVVAAVAGACPVMVDGGVRSGGDAFAAL- 611 Query: 222 DADVDGALAAS 232 Sbjct: 612 ALGAQAVFLGR 622 >UniRef50_C7T9L6 Fructose-bisphosphate aldolase n=4 Tax=Bacilli RepID=C7T9L6_LACRG Length = 297 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 64/194 (32%), Gaps = 14/194 (7%) Query: 47 LVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA---GGIKSLEDAAKILSFGADKISIN 103 + + T + + ++V + ++PF + G ++E+ + + G + I+ Sbjct: 46 IAVHP-TELAYAKDDFFAYVLQRIRNSNVPFVLHLDHGD--TIENVERAIHDGFSSVMID 102 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 +A I + + E G E + D Sbjct: 103 GSL---EDWEKNVAITKETVTICHRLGVSVEGELGTIGQTGNHIKEHLQNGIYTQPDDAK 159 Query: 164 QEVQKRGAGEIVL-----NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + V++ G + + + + V ++ LK++ V VPL+ GG+ + + Sbjct: 160 KFVEETGVDTLAVGIGTAHGIYPSDVTPKIRIDILKEILAVVDVPLVLHGGSSNPDDQIA 219 Query: 219 AFRDADVDGALAAS 232 + +S Sbjct: 220 EAVKTGIAKVNISS 233 >UniRef50_B0S343 NADH-dependent flavin oxidoreductase n=3 Tax=Clostridia RepID=B0S343_FINM2 Length = 330 Score = 53.7 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 14/109 (12%) Query: 18 VKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASS------DGRVVDKSWVSR 68 ++ E D + A+ + + G D DI+ D R ++S+ Sbjct: 219 IRMGAGDYLEGGLSTEDSIHAAQEFVKAGVD---VLDISGGMCMFSIDDQRAGFFDFLSK 275 Query: 69 -VAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITR 115 + E +D+P + GG+K+ ED IL+ G D + I D I Sbjct: 276 PIYENVDVPVILTGGVKTGEDVEDILNRGVCDLVGIGRSVFKDSNWIEN 324 Score = 44.5 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 24/181 (13%) Query: 86 LEDAAKILSFGADKISINSPALA-------------DPTLITRLADRFGVQCIVVGIDTW 132 ++ A + G D + I+S + R + ++ Sbjct: 150 VDAAVRAKKAGFDGVEIHSAHGYLLNQFLSPITNKRTDEYGGDIDGRIKIHLEIIRKIRE 209 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD--- 189 E + GD ++ +++ QE K G + ++ D Sbjct: 210 KVGENYPIFIRMGAGDYLEGGLSTEDSIHAAQEFVKAGVD---VLDISGGMCMFSIDDQR 266 Query: 190 ---LEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH-KQIINIGEL 244 + L K + E VP+I +GG T E + D E+ Sbjct: 267 AGFFDFLSKPIYENVDVPVILTGGVKTGEDVEDILNRGVCDLVGIGRSVFKDSNWIENEI 326 Query: 245 K 245 K Sbjct: 327 K 327 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B0TDM7 Imidazole glycerol phosphate synthase subunit hi... 182 1e-44 UniRef50_Q12UY6 Imidazole glycerol phosphate synthase subunit hi... 182 1e-44 UniRef50_B2V9M8 Imidazole glycerol phosphate synthase subunit hi... 180 3e-44 UniRef50_C9KKW6 Imidazole glycerol phosphate synthase subunit hi... 178 1e-43 UniRef50_C7P985 Imidazole glycerol phosphate synthase subunit hi... 178 2e-43 UniRef50_C4L176 Imidazole glycerol phosphate synthase subunit hi... 176 7e-43 UniRef50_A6UUZ9 Imidazole glycerol phosphate synthase subunit hi... 172 7e-42 UniRef50_B8FFL4 Imidazole glycerol phosphate synthase subunit hi... 171 3e-41 UniRef50_B9DIP1 Imidazole glycerol phosphate synthase subunit hi... 170 5e-41 UniRef50_Q18JI3 Imidazole glycerol phosphate synthase subunit hi... 167 3e-40 UniRef50_B1I557 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 166 8e-40 UniRef50_C0Z6P5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 165 1e-39 UniRef50_D2RTG3 Phosphoribosylformimino-5-aminoimidazole carboxa... 165 1e-39 UniRef50_Q1PWX6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 164 2e-39 UniRef50_Q8DJN7 Imidazole glycerol phosphate synthase subunit hi... 164 2e-39 UniRef50_C7RAI6 Imidazole glycerol phosphate synthase subunit hi... 163 5e-39 UniRef50_A5FQU7 Histidine biosynthesis protein n=5 Tax=Dehalococ... 162 8e-39 UniRef50_B5YIB7 Imidazole glycerol phosphate synthase subunit hi... 162 1e-38 UniRef50_Q12WC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 161 3e-38 UniRef50_B3DY29 Phosphoribosylformimino-5-aminoimidazole carboxa... 160 5e-38 UniRef50_A0AG16 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 159 7e-38 UniRef50_A2C5V2 Imidazoleglycerol-phosphate synthase n=2 Tax=Pro... 157 3e-37 UniRef50_A8M910 Imidazole glycerol phosphate synthase subunit hi... 157 3e-37 UniRef50_Q2P3J8 Imidazole glycerol phosphate synthase subunit hi... 157 4e-37 UniRef50_C9RKR3 Imidazole glycerol phosphate synthase subunit hi... 156 6e-37 UniRef50_C4ZLR4 Imidazole glycerol phosphate synthase subunit hi... 156 6e-37 UniRef50_B5YIB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 156 7e-37 UniRef50_A3EUM5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 156 7e-37 UniRef50_B8D115 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 156 7e-37 UniRef50_B0TY42 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 156 7e-37 UniRef50_C4Z0A8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 156 8e-37 UniRef50_D1CF74 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 156 8e-37 UniRef50_A2BQT3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 156 1e-36 UniRef50_Q2LTH2 Imidazole glycerol phosphate synthase, cyclase s... 155 1e-36 UniRef50_B2V6T1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 155 1e-36 UniRef50_A5INE6 Imidazole glycerol phosphate synthase subunit hi... 155 1e-36 UniRef50_A4XL21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 155 1e-36 UniRef50_Q0IDQ9 Imidazole glycerol phosphate synthase subunit hi... 155 1e-36 UniRef50_P74106 Imidazole glycerol phosphate synthase subunit hi... 155 2e-36 UniRef50_C0QRW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 154 2e-36 UniRef50_D0LIZ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 154 3e-36 UniRef50_B9E171 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 154 4e-36 UniRef50_P62353 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 153 4e-36 UniRef50_Q2JK82 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 153 4e-36 UniRef50_B4S4Z8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 153 4e-36 UniRef50_C5BV99 Imidazole glycerol phosphate synthase subunit hi... 153 5e-36 UniRef50_Q02YX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 153 6e-36 UniRef50_B8FP23 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 153 7e-36 UniRef50_UPI0001C41EB6 phosphoribosylformimino-5- aminoimidazole... 152 9e-36 UniRef50_Q3AD49 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 152 1e-35 UniRef50_A3CNT1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 152 1e-35 UniRef50_Q3ZYM9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 151 2e-35 UniRef50_C0RFX3 Imidazole glycerol phosphate synthase subunit hi... 151 2e-35 UniRef50_Q18C71 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 151 2e-35 UniRef50_C8PKX5 Imidazole glycerol phosphate synthase subunit hi... 151 3e-35 UniRef50_B3QRR1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 150 3e-35 UniRef50_Q2SCV5 Imidazoleglycerol-phosphate synthase n=1 Tax=Hah... 150 4e-35 UniRef50_B8J249 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 150 5e-35 UniRef50_C4FS06 Putative uncharacterized protein n=1 Tax=Veillon... 150 5e-35 UniRef50_C0W9Y4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 149 6e-35 UniRef50_Q58927 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 149 6e-35 UniRef50_P62356 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 149 9e-35 UniRef50_A6Q4V9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 149 9e-35 UniRef50_Q65EG2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 149 1e-34 UniRef50_Q1R079 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 149 1e-34 UniRef50_Q4FNT6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 148 1e-34 UniRef50_UPI0001C3165B phosphoribosylformimino-5-aminoimidazole ... 148 1e-34 UniRef50_B6BGE0 Imidazole glycerol phosphate synthase, cyclase s... 148 2e-34 UniRef50_Q3SPZ7 Histidine biosynthesis n=1 Tax=Nitrobacter winog... 148 2e-34 UniRef50_C9KKW7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 147 4e-34 UniRef50_Q4JW54 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 147 4e-34 UniRef50_A9A5X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 147 5e-34 UniRef50_Q8DMA5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 146 9e-34 UniRef50_D1U7I5 Histidine biosynthesis protein n=1 Tax=Desulfovi... 146 1e-33 UniRef50_Q6KZD5 Histidine biosynthesis protein HisF n=1 Tax=Picr... 145 1e-33 UniRef50_A4G9I7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 145 1e-33 UniRef50_B2A6X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 145 1e-33 UniRef50_A1W0U8 Putative imidazole glycerol phosphate synthase s... 145 1e-33 UniRef50_C1TLB3 Phosphoribosylformimino-5-aminoimidazole carboxa... 144 2e-33 UniRef50_C9RH20 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 144 2e-33 UniRef50_A7I1W6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 144 3e-33 UniRef50_B1CBX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 144 4e-33 UniRef50_A3CTR9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 144 4e-33 UniRef50_Q0AW40 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 143 4e-33 UniRef50_Q18DL2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 143 5e-33 UniRef50_A7FJH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 143 6e-33 UniRef50_B0T799 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 143 7e-33 UniRef50_A0M284 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 142 8e-33 UniRef50_B1YL10 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 142 8e-33 UniRef50_D1B9F8 Histidine biosynthesis protein n=1 Tax=Thermanae... 142 9e-33 UniRef50_D0RQP1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 142 1e-32 UniRef50_B3E201 Histidine biosynthesis protein n=1 Tax=Geobacter... 142 1e-32 UniRef50_A3N3W4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 142 1e-32 UniRef50_Q7UG70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 142 1e-32 UniRef50_C6UMW6 Putative imidazoleglycerol phosphate synthase, c... 141 2e-32 UniRef50_A1KJ21 Imidazole glycerol phosphate synthase subunit hi... 141 2e-32 UniRef50_UPI00016BFDF6 putative 1-(5-phosphoribosyl)-5- n=1 Tax=... 141 3e-32 UniRef50_B0K628 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 140 4e-32 UniRef50_D2Q1W2 Bifunctional HisA/TrpF protein n=2 Tax=Actinomyc... 140 5e-32 UniRef50_B9KXJ4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 139 8e-32 UniRef50_B2UX21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 139 9e-32 UniRef50_A6C5Q1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 138 2e-31 UniRef50_Q2S296 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 138 2e-31 UniRef50_A8ESN1 Imidazoleglycerol phosphate synthase, cyclase su... 138 2e-31 UniRef50_P72139 Putative imidazole glycerol phosphate synthase s... 138 2e-31 UniRef50_Q1AX07 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 137 2e-31 UniRef50_D1BQK4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 137 3e-31 UniRef50_O29276 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 137 3e-31 UniRef50_C7PAV4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 137 4e-31 UniRef50_A8S9L9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 136 6e-31 UniRef50_B1H0E7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 136 6e-31 UniRef50_Q47XB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 136 9e-31 UniRef50_C0BNI2 Histidine biosynthesis protein n=1 Tax=Flavobact... 136 1e-30 UniRef50_B4W8G6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 135 1e-30 UniRef50_C2BYH3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 135 1e-30 UniRef50_Q88UE2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 134 2e-30 UniRef50_B8IPH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 134 3e-30 UniRef50_B4SDB6 Histidine biosynthesis protein n=9 Tax=Bacteria ... 134 3e-30 UniRef50_C0QWR6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 134 3e-30 UniRef50_B0R4B2 Imidazole glycerol phosphate synthase subunit hi... 134 3e-30 UniRef50_C4G189 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 133 5e-30 UniRef50_B8FJR2 Histidine biosynthesis protein n=1 Tax=Desulfati... 133 6e-30 UniRef50_A6LDI6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 133 6e-30 UniRef50_D0MJ01 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 133 7e-30 UniRef50_C5BRY3 Imidazoleglycerol phosphate synthase, cyclase su... 133 7e-30 UniRef50_A8ZUC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 132 9e-30 UniRef50_Q7V958 Putative imidazole glycerol phosphate synthase s... 132 1e-29 UniRef50_C7H029 Imidazoleglycerol phosphate synthase, cyclase su... 132 1e-29 UniRef50_A7H5V3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 132 1e-29 UniRef50_A1ZT22 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 132 1e-29 UniRef50_Q12NS9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 131 2e-29 UniRef50_B9K9S2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 131 2e-29 UniRef50_Q5NMD5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 131 2e-29 UniRef50_Q039B4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 131 3e-29 UniRef50_Q7N8D1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 130 5e-29 UniRef50_A7H8C3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 130 5e-29 UniRef50_Q5WX95 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 129 6e-29 UniRef50_Q67KH9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 129 7e-29 UniRef50_Q7MPK7 Putative imidazole glycerol phosphate synthase s... 129 8e-29 UniRef50_D1Y7T0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 129 1e-28 UniRef50_B6YWA8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 129 1e-28 UniRef50_C8WPG6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 128 2e-28 UniRef50_C7TCJ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 128 2e-28 UniRef50_A3HVE8 Phosphoribosylformimino-5-aminoimidazole carboxa... 128 2e-28 UniRef50_A2C1S3 Imidazole glycerol-phosphate synthase n=1 Tax=Pr... 127 3e-28 UniRef50_Q3ICF4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 127 3e-28 UniRef50_A6T0B3 Imidazoleglycerol phosphate synthase n=4 Tax=Pro... 127 3e-28 UniRef50_D0CY30 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 127 5e-28 UniRef50_Q1IWD2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 127 5e-28 UniRef50_A7FU80 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 127 5e-28 UniRef50_Q1GHT0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 126 5e-28 UniRef50_C1CY68 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 126 6e-28 UniRef50_D1B860 Histidine biosynthesis protein n=1 Tax=Thermanae... 126 7e-28 UniRef50_P59520 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 126 7e-28 UniRef50_C5E2I9 KLTH0H05368p n=17 Tax=cellular organisms RepID=C... 126 7e-28 UniRef50_C4L175 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 126 8e-28 UniRef50_C6UMW5 Putative phosphoribosylformimino-5-aminoimidazol... 124 2e-27 UniRef50_B2I5X7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 124 2e-27 UniRef50_Q7MPP3 Putative imidazole glycerol phosphate synthase s... 124 2e-27 UniRef50_Q6SHC0 Imidazoleglycerol phosphate synthase, cyclase su... 124 3e-27 UniRef50_C6N0X3 Phosphoribosylformimino-5-aminoimidazole carboxa... 124 3e-27 UniRef50_A4EBZ6 Putative uncharacterized protein n=2 Tax=Collins... 124 3e-27 UniRef50_C6Y3G6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 124 4e-27 UniRef50_Q058A3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 123 6e-27 UniRef50_Q7VQW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 122 1e-26 UniRef50_Q056S8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 122 1e-26 UniRef50_P33734 Cyclase n=51 Tax=cellular organisms RepID=HIS5_Y... 122 1e-26 UniRef50_B4U8M5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 122 1e-26 UniRef50_B1ZW12 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 121 2e-26 UniRef50_D1RFK6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 121 2e-26 UniRef50_C7GBG4 Imidazoleglycerol phosphate synthase, cyclase su... 120 3e-26 UniRef50_C8WUX9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 120 3e-26 UniRef50_B5YE89 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 119 7e-26 UniRef50_D2NNQ2 Phosphoribosylformimino-5-aminoimidazole carboxa... 119 7e-26 UniRef50_Q8TYD6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 119 8e-26 UniRef50_A7S213 Predicted protein n=1 Tax=Nematostella vectensis... 119 8e-26 UniRef50_B0SDS6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 119 9e-26 UniRef50_A1ZVN4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 117 3e-25 UniRef50_C2FZQ4 Possible isomerase n=2 Tax=Sphingobacterium spir... 117 5e-25 UniRef50_C4R8P0 Imidazole glycerol phosphate synthase (Glutamine... 116 6e-25 UniRef50_A0LAC8 Imidazole glycerol phosphate synthase subunit hi... 116 6e-25 UniRef50_A5INE5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 116 7e-25 UniRef50_B0VH62 Dihydrouridine synthase family protein n=1 Tax=C... 115 9e-25 UniRef50_A9NE09 tRNA-dihydrouridine synthase n=2 Tax=Mollicutes ... 114 4e-24 UniRef50_C0WDP2 Putative uncharacterized protein n=1 Tax=Acidami... 114 4e-24 UniRef50_Q0AP83 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 113 6e-24 UniRef50_D2RLJ7 TIM-barrel protein, nifR3 family n=1 Tax=Acidami... 113 7e-24 UniRef50_C6XVQ0 Histidine biosynthesis protein n=1 Tax=Pedobacte... 112 9e-24 UniRef50_A8A8V9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 111 2e-23 UniRef50_A7SPR8 Predicted protein n=1 Tax=Nematostella vectensis... 111 3e-23 UniRef50_Q7ZWS1 tRNA-dihydrouridine synthase 3-like n=3 Tax=Xeno... 110 3e-23 UniRef50_B9U3E3 HisA n=1 Tax=Taylorella equigenitalis RepID=B9U3... 110 4e-23 UniRef50_Q2RZL4 NifR3 family enzyme n=2 Tax=Rhodothermaceae RepI... 110 5e-23 UniRef50_C1FJN8 Predicted protein n=13 Tax=cellular organisms Re... 110 6e-23 UniRef50_B3QWF2 TIM-barrel protein, nifR3 family n=26 Tax=Bacter... 109 7e-23 UniRef50_D1BLD4 TIM-barrel protein, nifR3 family n=12 Tax=cellul... 108 2e-22 UniRef50_B7GFK6 tRNA-dihydrouridine synthase n=211 Tax=Bacteria ... 108 2e-22 UniRef50_Q6F288 TRNA dihydrouridine synthetase n=3 Tax=Mollicute... 108 2e-22 UniRef50_A9A4W7 Putative TIM-barrel protein, nifR3 family n=1 Ta... 108 2e-22 UniRef50_B8FGI4 TIM-barrel protein, nifR3 family n=1 Tax=Desulfa... 107 3e-22 UniRef50_Q1N2Y7 HisF protein n=1 Tax=Bermanella marisrubri RepID... 107 3e-22 UniRef50_Q54CU9 tRNA-dihydrouridine synthase 3-like n=1 Tax=Dict... 107 3e-22 UniRef50_C1E1T8 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 107 4e-22 UniRef50_Q2N6D2 Imidazoleglycerol-phosphate synthase, cyclase su... 107 4e-22 UniRef50_P37567 Probable tRNA-dihydrouridine synthase 1 n=19 Tax... 107 4e-22 UniRef50_A8NZY7 tRNA-dihydrouridine synthase 3 n=2 Tax=Agaricale... 107 6e-22 UniRef50_A6Y2G9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 106 6e-22 UniRef50_A1WSE3 Histidine biosynthesis n=1 Tax=Verminephrobacter... 106 6e-22 UniRef50_Q4DCG2 Putative uncharacterized protein n=2 Tax=Trypano... 106 7e-22 UniRef50_UPI000058804E PREDICTED: similar to MGC53781 protein n=... 106 7e-22 UniRef50_C6JNK3 Dihydrouridine-tRNA ligase n=4 Tax=Fusobacterium... 106 8e-22 UniRef50_A8ZYE4 Putative TIM-barrel protein, nifR3 family n=1 Ta... 106 9e-22 UniRef50_Q2YZ70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 105 1e-21 UniRef50_Q55724 Probable tRNA-dihydrouridine synthase 1 n=34 Tax... 105 1e-21 UniRef50_UPI000038E352 1-(5-phosphoribosyl)-5-[(5-phosphoribosyl... 105 1e-21 UniRef50_C7RGQ7 TIM-barrel protein, nifR3 family n=4 Tax=Anaeroc... 105 1e-21 UniRef50_D0NNQ3 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 105 2e-21 UniRef50_C7H613 tRNA-dihydrouridine synthase n=3 Tax=Ruminococca... 105 2e-21 UniRef50_Q58114 Uncharacterized protein MJ0703 n=8 Tax=Methanoco... 105 2e-21 UniRef50_A2BSD9 Putative uncharacterized protein n=1 Tax=Prochlo... 104 3e-21 UniRef50_Q582L4 TRNA-dihydrouridine synthase 3, putative n=5 Tax... 104 3e-21 UniRef50_C8W3U6 TIM-barrel protein, nifR3 family n=8 Tax=Clostri... 104 4e-21 UniRef50_UPI00017B0A55 UPI00017B0A55 related cluster n=1 Tax=Tet... 104 4e-21 UniRef50_UPI000186DAF4 tRNA-dihydrouridine synthase, putative n=... 104 5e-21 UniRef50_A3UE29 HisF (Cyclase) n=1 Tax=Oceanicaulis alexandrii H... 103 5e-21 UniRef50_Q3AZ67 Dihydrouridine synthase TIM-barrel protein nifR3... 103 6e-21 UniRef50_A9KHE5 TIM-barrel protein, nifR3 family n=2 Tax=Clostri... 103 6e-21 UniRef50_C1F4Z7 Putative tRNA-dihydrouridine synthase n=1 Tax=Ac... 103 7e-21 UniRef50_B9WJS1 Imidazole glycerol phosphate synthase [includes:... 103 7e-21 UniRef50_Q1IVR5 Dihydrouridine synthase TIM-barrel protein nifR3... 103 7e-21 UniRef50_C9XSF8 tRNA-dihydrouridine synthase n=24 Tax=Clostridia... 102 8e-21 UniRef50_Q5FMA1 Transcriptional regulator n=14 Tax=Firmicutes Re... 102 8e-21 UniRef50_C1A3V7 Putative tRNA-dihydrouridine synthase n=1 Tax=Ge... 102 1e-20 UniRef50_C4Z9L8 tRNA-dihydrouridine synthase n=26 Tax=Firmicutes... 102 1e-20 UniRef50_D2L5A7 Histidine biosynthesis protein n=1 Tax=Desulfovi... 102 1e-20 UniRef50_C1ZDL9 Putative TIM-barrel protein, nifR3 family n=1 Ta... 102 1e-20 UniRef50_D1SND3 HisA/hisF family protein n=1 Tax=Methanocaldococ... 102 2e-20 UniRef50_Q062W6 Putative cyclase hisF n=1 Tax=Synechococcus sp. ... 101 2e-20 UniRef50_C1FNC8 Dihydrouridine synthase n=35 Tax=cellular organi... 101 2e-20 UniRef50_B2ULM0 TIM-barrel protein, nifR3 family n=3 Tax=Verruco... 101 2e-20 UniRef50_B5X496 tRNA-dihydrouridine synthase 3-like n=3 Tax=Euka... 101 3e-20 UniRef50_UPI000194DF67 PREDICTED: dihydrouridine synthase 3-like... 101 3e-20 UniRef50_B6BR00 Imidazole glycerol phosphate synthase subunit Hi... 101 3e-20 UniRef50_UPI0000D52F94 Dihydrouridine synthase TIM-barrel protei... 101 3e-20 UniRef50_B6W908 Putative uncharacterized protein n=1 Tax=Anaeroc... 100 4e-20 UniRef50_Q6KZD4 Phosphoribosylformimino-5-aminoimidazole carboxa... 100 4e-20 UniRef50_Q5CSA9 Dus1p, tRNA dihydrouridine synthase (Fragment) n... 100 5e-20 UniRef50_Q3A324 Dihydrouridine synthase n=10 Tax=Desulfuromonada... 100 6e-20 UniRef50_D0L1E3 TIM-barrel protein, nifR3 family n=1 Tax=Halothi... 100 6e-20 UniRef50_C9YDK8 Imidazole glycerol phosphate synthase subunit hi... 100 7e-20 UniRef50_D0U4P6 tRNA-dihydrouridine synthase n=2 Tax=uncultured ... 100 7e-20 UniRef50_Q9KV66 tRNA-dihydrouridine synthase B n=56 Tax=Proteoba... 100 8e-20 UniRef50_Q5KNA0 Imidazoleglycerol phosphate synthase, putative n... 100 8e-20 UniRef50_Q6SFW7 NifR3/Smm1 family protein n=1 Tax=uncultured mar... 100 8e-20 UniRef50_Q2LR94 TRNA-dihydrouridine synthase n=2 Tax=Deltaproteo... 99 1e-19 UniRef50_Q7X346 Putative uncharacterized protein n=1 Tax=uncultu... 99 1e-19 UniRef50_Q01ZU7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 99 1e-19 UniRef50_Q5KC68 tRNA-dihydrouridine synthase 3 n=2 Tax=Filobasid... 99 1e-19 UniRef50_C8W6Y9 TIM-barrel protein, nifR3 family n=1 Tax=Atopobi... 99 1e-19 UniRef50_Q8ZY14 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 99 1e-19 UniRef50_A6DPY9 Putative uncharacterized protein n=1 Tax=Lentisp... 99 2e-19 UniRef50_Q31II6 Dihydrouridine synthase n=1 Tax=Thiomicrospira c... 99 2e-19 UniRef50_A8V5Z6 Phosphoribosylformimino-5-aminoimidazole carboxa... 99 2e-19 UniRef50_B3RKU4 Putative uncharacterized protein n=2 Tax=Metazoa... 98 2e-19 UniRef50_A0Q6L0 TRNA-dihydrouridine synthase n=19 Tax=Francisell... 98 3e-19 UniRef50_Q7PVV7 AGAP009171-PA (Fragment) n=3 Tax=Endopterygota R... 98 3e-19 UniRef50_Q8PX79 NifR3-like protein n=3 Tax=Methanosarcina RepID=... 98 3e-19 UniRef50_D2MLS1 TIM-barrel protein, nifR3 family n=1 Tax=Bulleid... 98 3e-19 UniRef50_A4RQU5 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 97 4e-19 UniRef50_Q91XI1 tRNA-dihydrouridine synthase 3-like n=12 Tax=Cho... 97 4e-19 UniRef50_Q96G46 tRNA-dihydrouridine synthase 3-like n=17 Tax=Coe... 97 4e-19 UniRef50_Q88DK5 tRNA-dihydrouridine synthase B n=460 Tax=Proteob... 97 4e-19 UniRef50_Q1RH84 Probable tRNA-dihydrouridine synthase n=59 Tax=A... 97 4e-19 UniRef50_B8LDL7 N-acetyl-glutamate-gamma-semialdehyde dehydrogen... 97 5e-19 UniRef50_A4YI32 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 97 5e-19 UniRef50_C8WHM7 TIM-barrel protein, nifR3 family n=2 Tax=Corioba... 97 5e-19 UniRef50_C9KMX2 tRNA-dihydrouridine synthase n=3 Tax=Veillonella... 97 5e-19 UniRef50_D2RA64 TIM-barrel protein, nifR3 family n=5 Tax=Actinob... 97 6e-19 UniRef50_Q5M689 Possible transcriptional regulator n=25 Tax=Stre... 97 6e-19 UniRef50_D1R8P9 Putative uncharacterized protein n=1 Tax=Parachl... 97 6e-19 UniRef50_P44965 tRNA-dihydrouridine synthase B n=20 Tax=Pasteure... 97 6e-19 UniRef50_C5WE57 tRNA-dihydrouridine synthase n=42 Tax=Streptococ... 97 7e-19 UniRef50_C7NHA2 Phosphoribosylformimino-5-aminoimidazole carboxa... 97 8e-19 UniRef50_UPI0001BC5FF0 nitrogen regulation protein NIFR3 n=1 Tax... 96 8e-19 UniRef50_C7LZ82 Histidine biosynthesis protein n=1 Tax=Acidimicr... 96 8e-19 UniRef50_C7RAI7 Phosphoribosyl-ATP diphosphatase n=1 Tax=Kangiel... 96 8e-19 UniRef50_D2U2K4 tRNA-dihydrouridine synthase B n=1 Tax=Arsenopho... 96 9e-19 UniRef50_B0UHM8 TIM-barrel protein, nifR3 family n=6 Tax=Rhizobi... 96 9e-19 UniRef50_Q6MRF1 Transcription regulator homolog yacF n=1 Tax=Bde... 96 1e-18 UniRef50_C0QKE4 Dhs2 n=1 Tax=Desulfobacterium autotrophicum HRM2... 96 1e-18 UniRef50_B9MMW4 TIM-barrel protein, nifR3 family n=3 Tax=Clostri... 96 1e-18 UniRef50_Q1D4M2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 96 1e-18 UniRef50_B2A3T5 TIM-barrel protein, nifR3 family n=1 Tax=Natrana... 96 2e-18 UniRef50_B0TBQ2 Dihydrouridine synthase tim-barrel nifr3 family ... 95 2e-18 UniRef50_A8N483 Putative uncharacterized protein n=2 Tax=Agarica... 95 2e-18 UniRef50_B6YQB2 tRNA-dihydrouridine synthase n=36 Tax=Bacteria R... 95 3e-18 UniRef50_Q1NXZ7 Dihydrouridine synthase TIM-barrel protein nifR3... 94 3e-18 UniRef50_A0LJ96 Putative TIM-barrel protein, nifR3 family n=1 Ta... 94 3e-18 UniRef50_D1NSS9 Putative tRNA-dihydrouridine synthase n=1 Tax=Bi... 94 3e-18 UniRef50_B8GCQ5 TIM-barrel protein, nifR3 family n=6 Tax=Chlorof... 94 4e-18 UniRef50_A6CBK4 Predicted TIM-barrel enzyme, possibly dehydrogen... 94 4e-18 UniRef50_C0WXE8 Imidazole glycerol phosphate synthase n=2 Tax=La... 94 4e-18 UniRef50_C1ZGV0 tRNA-dihydrouridine synthase n=1 Tax=Planctomyce... 94 5e-18 UniRef50_A6NW05 Putative uncharacterized protein n=1 Tax=Bactero... 94 5e-18 UniRef50_O33772 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 94 5e-18 UniRef50_Q7WYR2 Imidazole glycerol phosphate synthase, subunit H... 94 5e-18 UniRef50_Q2RM54 Dihydrouridine synthase TIM-barrel protein nifR3... 94 5e-18 UniRef50_Q6AJZ5 tRNA-dihydrouridine synthase n=1 Tax=Desulfotale... 94 6e-18 UniRef50_Q17M24 tRNA-dihydrouridine synthase n=2 Tax=Diptera Rep... 94 6e-18 UniRef50_Q14SX5 Putative dihydrouridine synthase n=6 Tax=Clostri... 94 6e-18 UniRef50_Q9VIS4 CG10463 n=12 Tax=Drosophila RepID=Q9VIS4_DROME 93 6e-18 UniRef50_A6BZR9 Predicted TIM-barrel enzyme, possibly dehydrogen... 93 7e-18 UniRef50_B1ZWU6 TIM-barrel protein, nifR3 family n=6 Tax=Verruco... 93 8e-18 UniRef50_C7PIH0 TIM-barrel protein, nifR3 family n=7 Tax=Bactero... 93 8e-18 UniRef50_Q6M9N8 Putative uncharacterized protein n=1 Tax=Candida... 93 9e-18 UniRef50_Q0BSS6 tRNA-dihydrouridine synthase n=15 Tax=Alphaprote... 93 9e-18 UniRef50_C2D6C5 Possible tRNA-dihydrouridine synthase n=1 Tax=At... 93 1e-17 UniRef50_Q010A0 tRNA-dihydrouridine synthase (ISS) n=2 Tax=Mamie... 92 1e-17 UniRef50_Q9RDC6 Putative uncharacterized protein SCO2497 n=4 Tax... 92 1e-17 UniRef50_C0GJW0 TIM-barrel protein, nifR3 family n=1 Tax=Dethiob... 92 1e-17 UniRef50_A0Z0J5 TRNA-dihydrouridine synthase B n=2 Tax=unclassif... 92 2e-17 UniRef50_C6PST5 Dihydrouridine synthase DuS n=1 Tax=Clostridium ... 92 2e-17 UniRef50_Q3MB47 Dihydrouridine synthase, DuS n=6 Tax=Bacteria Re... 92 2e-17 UniRef50_O67533 Probable tRNA-dihydrouridine synthase n=1 Tax=Aq... 92 2e-17 UniRef50_C9RMP3 Dihydrouridine synthase DuS n=1 Tax=Fibrobacter ... 92 2e-17 UniRef50_B8GW86 tRNA-dihydrouridine synthase n=7 Tax=Alphaproteo... 92 2e-17 UniRef50_Q090Q9 TRNA-dihydrouridine synthase B n=2 Tax=Cystobact... 92 2e-17 UniRef50_C2KYD0 Dihydrouridine synthase n=4 Tax=Bacteria RepID=C... 91 3e-17 UniRef50_B9ZKT6 TIM-barrel protein, nifR3 family n=1 Tax=Thioalk... 91 3e-17 UniRef50_Q54XQ6 tRNA-dihydrouridine synthase 1-like protein n=1 ... 91 3e-17 UniRef50_C4QMR1 tRNA-dihydrouridine synthase, putative n=1 Tax=S... 91 3e-17 UniRef50_A8J121 Predicted protein n=1 Tax=Chlamydomonas reinhard... 91 3e-17 UniRef50_C5F231 Putative uncharacterized protein n=2 Tax=Helicob... 91 3e-17 UniRef50_C9RDL3 HisA/hisF family protein n=3 Tax=Methanococcales... 91 3e-17 UniRef50_Q4JIN2 Orf17 n=1 Tax=uncultured bacterium BAC10-10 RepI... 91 3e-17 UniRef50_Q1IKB1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 91 4e-17 UniRef50_A9GW95 Dihydrouridine synthase TIM-barrel protein nifR3... 91 4e-17 UniRef50_Q4J8J0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 91 5e-17 UniRef50_Q0F181 Dihydrouridine synthase TIM-barrel protein nifR3... 91 5e-17 UniRef50_Q1Q3Q8 Strongly similar to tRNA-dihydrouridine synthase... 91 5e-17 UniRef50_O26765 Phosphoribosylformimino-5-aminoimidazole carboxa... 91 5e-17 UniRef50_Q3JEF8 Histidine biosynthesis n=2 Tax=Nitrosococcus oce... 90 7e-17 UniRef50_D0WEP2 tRNA-dihydrouridine synthase B n=2 Tax=Slackia R... 90 8e-17 UniRef50_D2NNX0 tRNA-dihydrouridine synthase n=3 Tax=Actinobacte... 90 8e-17 UniRef50_C2G0W0 Possible imidazoleglycerol-phosphate synthase Hi... 90 9e-17 UniRef50_C5TM05 tRNA-dihydrouridine synthase C n=5 Tax=Neisseria... 90 9e-17 UniRef50_B8DSX5 Possible NifR3-like protein n=15 Tax=Bifidobacte... 89 9e-17 UniRef50_Q6AKJ6 Putative uncharacterized protein n=1 Tax=Desulfo... 89 1e-16 UniRef50_A9UTQ9 Predicted protein n=1 Tax=Monosiga brevicollis R... 89 1e-16 UniRef50_O95620 tRNA-dihydrouridine synthase 4-like n=40 Tax=Met... 89 1e-16 UniRef50_B7PPV8 tRNA-dihydrouridine synthase, putative n=1 Tax=I... 89 1e-16 UniRef50_D0LJX3 TIM-barrel protein, nifR3 family n=1 Tax=Haliang... 89 1e-16 UniRef50_A7H1K2 tRNA-dihydrouridine synthase B n=14 Tax=Campylob... 89 2e-16 UniRef50_UPI00016C52C4 dihydrouridine synthase DuS n=1 Tax=Gemma... 89 2e-16 UniRef50_D1AWB1 Dihydrouridine synthase DuS n=12 Tax=Fusobacteri... 89 2e-16 UniRef50_UPI000180C543 PREDICTED: similar to dihydrouridine synt... 89 2e-16 UniRef50_C6XJQ7 Dihydrouridine synthase DuS n=2 Tax=Hyphomonadac... 89 2e-16 UniRef50_A0M6M9 TRNA-dihydrouridine synthase n=16 Tax=Bacteroide... 89 2e-16 UniRef50_B3PD21 Dihydrouridine synthase family protein n=4 Tax=P... 88 2e-16 UniRef50_Q4UGK9 Putative uncharacterized protein n=2 Tax=Theiler... 88 2e-16 UniRef50_C9LMP9 tRNA-dihydrouridine synthase n=1 Tax=Dialister i... 88 2e-16 UniRef50_Q9JUP6 tRNA-dihydrouridine synthase C n=23 Tax=Neisseri... 88 3e-16 UniRef50_A5EVV4 Dihydrouridine synthase n=2 Tax=Cardiobacteriace... 88 3e-16 UniRef50_Q256J2 Dehydrogenases n=13 Tax=Chlamydiaceae RepID=Q256... 88 3e-16 UniRef50_B9NQS6 NifR3 family protein n=3 Tax=Rhodobacteraceae Re... 88 3e-16 UniRef50_UPI0001792282 PREDICTED: similar to tRNA-dihydrouridine... 88 4e-16 UniRef50_D1VTQ2 Probable tRNA-dihydrouridine synthase n=1 Tax=Pe... 87 4e-16 UniRef50_Q1PLA2 Putative cyclase hisF n=1 Tax=uncultured Prochlo... 87 4e-16 UniRef50_Q7QCT0 AGAP002791-PA (Fragment) n=3 Tax=Culicidae RepID... 87 4e-16 UniRef50_Q3ZZ14 Indole-3-glycerol phosphate synthase n=5 Tax=Deh... 87 4e-16 UniRef50_D2R6Z1 TIM-barrel protein, nifR3 family n=3 Tax=Plancto... 87 4e-16 UniRef50_B9JF02 tRNA-dihydrouridine synthase protein n=12 Tax=Al... 87 5e-16 UniRef50_B7G230 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 87 5e-16 UniRef50_C1ZB06 tRNA-dihydrouridine synthase n=1 Tax=Planctomyce... 87 6e-16 UniRef50_Q8TVJ8 Indole-3-glycerol phosphate synthase n=1 Tax=Met... 87 6e-16 UniRef50_Q12U52 tRNA-dihydrouridine synthase n=2 Tax=Archaea Rep... 87 6e-16 UniRef50_B0SC53 tRNA-dihydrouridine synthase n=2 Tax=Leptospira ... 87 6e-16 UniRef50_C5CI99 Dihydrouridine synthase DuS n=1 Tax=Kosmotoga ol... 87 6e-16 UniRef50_B1I3Z7 Indole-3-glycerol-phosphate synthase n=1 Tax=Can... 87 6e-16 UniRef50_B1LWM8 TIM-barrel protein, nifR3 family n=1 Tax=Methylo... 87 6e-16 UniRef50_Q7U923 Putative imidazole glycerol phosphate synthase s... 87 6e-16 UniRef50_C2KNM7 Possible tRNA-dihydrouridine synthase n=4 Tax=Mo... 86 9e-16 UniRef50_A5FL15 tRNA-dihydrouridine synthase B-like protein n=14... 86 9e-16 UniRef50_B9K738 TIM-barrel protein, nifR3 family n=1 Tax=Thermot... 86 1e-15 UniRef50_A1VHK2 Dihydrouridine synthase, DuS n=10 Tax=Desulfovib... 86 1e-15 UniRef50_C7GZ00 tRNA-dihydrouridine synthase n=1 Tax=Eubacterium... 86 1e-15 UniRef50_C6C170 Dihydrouridine synthase DuS n=1 Tax=Desulfovibri... 86 1e-15 UniRef50_A7BE39 Putative uncharacterized protein n=1 Tax=Actinom... 86 1e-15 UniRef50_D2QXV2 Dihydrouridine synthase DuS n=4 Tax=Planctomycet... 86 1e-15 UniRef50_C1E909 tRNA-dihydrouridine synthase (Fragment) n=2 Tax=... 86 1e-15 UniRef50_A5D1S4 Indole-3-glycerol phosphate synthase n=1 Tax=Pel... 86 1e-15 UniRef50_B0ESC7 tRNA-dihydrouridine synthase, putative n=2 Tax=E... 86 2e-15 UniRef50_A8M908 Histidine biosynthesis protein n=1 Tax=Caldivirg... 86 2e-15 UniRef50_B9JW92 Nitrogen regulation protein n=4 Tax=Rhizobiales ... 86 2e-15 UniRef50_UPI000179183B PREDICTED: similar to tRNA-dihydrouridine... 86 2e-15 UniRef50_C3MBL4 tRNA-dihydrouridine synthase n=1 Tax=Rhizobium s... 86 2e-15 UniRef50_Q6MNE9 Nitrogen regulation protein nifR3 n=1 Tax=Bdello... 85 2e-15 UniRef50_Q9VPM1 CG3645, isoform A n=9 Tax=Diptera RepID=Q9VPM1_D... 85 2e-15 UniRef50_C0W327 Dihydrouridine synthase n=2 Tax=Actinomyces RepI... 85 2e-15 UniRef50_A8PTG4 tRNA-dihydrouridine synthase 3 n=1 Tax=Malassezi... 85 3e-15 UniRef50_Q5KP54 Putative uncharacterized protein n=1 Tax=Filobas... 85 3e-15 UniRef50_A7AQM0 Dihydrouridine synthase, putative n=1 Tax=Babesi... 85 3e-15 UniRef50_UPI0001BCCF0E nifR3 family TIM-barrel protein n=1 Tax=A... 85 3e-15 UniRef50_C7LQM9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibri... 84 3e-15 UniRef50_UPI0001C41F9C hisA/hisF family protein HisAF n=1 Tax=Me... 84 3e-15 UniRef50_A8Y3E7 Putative uncharacterized protein n=2 Tax=Caenorh... 84 3e-15 UniRef50_Q2RTR9 Dihydrouridine synthase TIM-barrel protein nifR3... 84 3e-15 UniRef50_Q54ES7 tRNA-dihydrouridine synthase 4-like protein n=1 ... 84 4e-15 UniRef50_C1MXD1 Dihydrouridine synthase n=1 Tax=Micromonas pusil... 84 4e-15 UniRef50_Q884C6 tRNA-dihydrouridine synthase C n=13 Tax=Proteoba... 84 4e-15 UniRef50_Q6P1R4 tRNA-dihydrouridine synthase 1-like n=12 Tax=Eut... 84 4e-15 UniRef50_B9CKJ9 tRNA-dihydrouridine synthase B n=1 Tax=Atopobium... 84 4e-15 UniRef50_A0EG06 Chromosome undetermined scaffold_94, whole genom... 84 5e-15 UniRef50_Q1NTJ9 Histidine biosynthesis n=1 Tax=delta proteobacte... 84 5e-15 UniRef50_B9L781 tRNA-dihydrouridine synthase B n=1 Tax=Nautilia ... 84 5e-15 UniRef50_Q4PG83 Putative uncharacterized protein n=2 Tax=Ustilag... 84 5e-15 UniRef50_C4VA23 Putative uncharacterized protein n=1 Tax=Nosema ... 84 6e-15 UniRef50_C9RDE9 Indole-3-glycerol-phosphate synthase n=1 Tax=Amm... 84 6e-15 UniRef50_C5LCP2 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 84 6e-15 UniRef50_B8P5W1 Predicted protein n=1 Tax=Postia placenta Mad-69... 84 6e-15 UniRef50_C8X244 Dihydrouridine synthase DuS n=1 Tax=Desulfohalob... 84 6e-15 UniRef50_C5D3D6 Indole-3-glycerol phosphate synthase n=10 Tax=Ba... 83 7e-15 UniRef50_B9PN28 tRNA-dihydrouridine synthase, putative n=3 Tax=T... 83 7e-15 UniRef50_A9KL43 Indole-3-glycerol phosphate synthase n=20 Tax=ce... 83 9e-15 UniRef50_P41504 Probable tRNA-dihydrouridine synthase n=93 Tax=A... 83 1e-14 UniRef50_Q2IG49 Dihydrouridine synthase TIM-barrel protein nifR3... 83 1e-14 UniRef50_B0S217 Nitrogen regulation protein n=3 Tax=Clostridiale... 83 1e-14 UniRef50_A6DCX2 tRNA-dihydrouridine synthase B n=1 Tax=Caminibac... 83 1e-14 UniRef50_Q00XL7 TRNA-dihydrouridine synthase (ISS) n=1 Tax=Ostre... 83 1e-14 UniRef50_Q6C4K2 YALI0E26059p n=1 Tax=Yarrowia lipolytica RepID=Q... 83 1e-14 UniRef50_D1CBJ4 Indole-3-glycerol-phosphate synthase n=1 Tax=The... 82 1e-14 UniRef50_B8P3J2 Predicted protein (Fragment) n=3 Tax=Agaricomyce... 82 1e-14 UniRef50_Q30WR3 Dihydrouridine synthase family protein n=3 Tax=D... 82 1e-14 UniRef50_C6SB16 tRNA-dihydrouridine synthase B n=1 Tax=Neisseria... 82 1e-14 UniRef50_A4IQ84 Indole-3-glycerol phosphate synthase n=7 Tax=Bac... 82 1e-14 UniRef50_Q9T0J6 tRNA-dihydrouridine synthase 3-like n=10 Tax=Mag... 82 1e-14 UniRef50_C0QPX6 Indole-3-glycerol phosphate synthase n=5 Tax=Aqu... 82 1e-14 UniRef50_A1ALX2 Indole-3-glycerol phosphate synthase n=4 Tax=Des... 82 1e-14 UniRef50_Q9XVN8 Protein F36A2.2, partially confirmed by transcri... 82 1e-14 UniRef50_A7I0T0 NifR3 family protein n=9 Tax=Epsilonproteobacter... 82 1e-14 UniRef50_Q9FH91 Gb|AAF51525.1 n=7 Tax=Viridiplantae RepID=Q9FH91... 82 1e-14 UniRef50_D2RIC4 Geranylgeranylglyceryl phosphate synthase n=2 Ta... 82 2e-14 UniRef50_Q09504 Uncharacterized tRNA-dihydrouridine synthase-lik... 82 2e-14 UniRef50_UPI00006A5AE6 PREDICTED: similar to PP3111 protein n=1 ... 82 2e-14 UniRef50_A3JG66 Putative uncharacterized protein n=3 Tax=Gammapr... 82 2e-14 UniRef50_C4ZG69 APG10 (Albino and pale green 10); 1-(5-phosphori... 82 2e-14 UniRef50_P33371 tRNA-dihydrouridine synthase C n=160 Tax=Gammapr... 82 2e-14 UniRef50_Q21L63 Dihydrouridine synthase, DuS n=1 Tax=Saccharopha... 82 2e-14 UniRef50_A5WG83 TIM-barrel protein, yjbN family n=2 Tax=Moraxell... 82 2e-14 UniRef50_B5IUS4 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 82 2e-14 UniRef50_Q7UKJ7 Indole-3-glycerol phosphate synthase n=5 Tax=Bac... 82 2e-14 UniRef50_B2JX56 Histidine biosynthesis protein n=6 Tax=Burkholde... 81 3e-14 UniRef50_B8HVG9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)m... 81 3e-14 UniRef50_D1AII6 Dihydrouridine synthase DuS n=1 Tax=Sebaldella t... 81 3e-14 UniRef50_A9BIR6 Dihydrouridine synthase DuS n=1 Tax=Petrotoga mo... 81 3e-14 UniRef50_Q8SUV4 Putative uncharacterized protein ECU07_1610 n=1 ... 81 3e-14 UniRef50_A4BCJ5 NifR3/Smm1 family protein n=1 Tax=Reinekea bland... 81 3e-14 UniRef50_C1EEA5 Dihydrouridine synthase n=1 Tax=Micromonas sp. R... 81 3e-14 UniRef50_A4EC62 Putative uncharacterized protein n=3 Tax=Collins... 81 3e-14 UniRef50_B8EIK2 Histidine biosynthesis protein n=2 Tax=Beijerinc... 81 4e-14 UniRef50_A5UNR3 ProFAR isomerase-related protein n=3 Tax=Methano... 81 4e-14 UniRef50_Q4P1U2 tRNA-dihydrouridine synthase 3 n=4 Tax=Eukaryota... 81 4e-14 UniRef50_Q3ABS1 Indole-3-glycerol phosphate synthase n=1 Tax=Car... 81 4e-14 UniRef50_B7XJM7 tRNA-dihydrouridine synthase 1 n=1 Tax=Enterocyt... 81 4e-14 UniRef50_B0S913 tRNA-dihydrouridine synthase n=7 Tax=Leptospira ... 81 4e-14 UniRef50_D1AZV6 Dihydrouridine synthase DuS n=7 Tax=Campylobacte... 81 5e-14 UniRef50_Q5KPM6 Putative uncharacterized protein n=2 Tax=Filobas... 81 5e-14 UniRef50_A4YHD8 Indole-3-glycerol phosphate synthase n=13 Tax=Su... 81 5e-14 UniRef50_Q06063 tRNA-dihydrouridine synthase 4 n=23 Tax=Saccharo... 81 5e-14 UniRef50_D2VPP8 Predicted protein n=1 Tax=Naegleria gruberi RepI... 81 6e-14 UniRef50_O82782 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 80 6e-14 UniRef50_A4S604 Predicted protein (Fragment) n=2 Tax=Mamiellales... 80 7e-14 UniRef50_A2EF32 Dihydrouridine synthase, putative n=1 Tax=Tricho... 80 7e-14 UniRef50_A4S141 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 80 7e-14 UniRef50_O67657 Indole-3-glycerol phosphate synthase n=2 Tax=Aqu... 80 7e-14 UniRef50_B9PUI2 Dihydrouridine synthase domain-containing protei... 80 7e-14 UniRef50_A5USQ4 Indole-3-glycerol phosphate synthase n=8 Tax=Bac... 80 8e-14 UniRef50_Q1QZQ6 Dihydrouridine synthase, DuS n=1 Tax=Chromohalob... 80 8e-14 UniRef50_Q5ZRM0 Nitrogen regulation protein n=6 Tax=Legionella R... 80 8e-14 UniRef50_A4RZE7 Predicted protein n=4 Tax=cellular organisms Rep... 80 9e-14 UniRef50_A3VWV8 TRNA-dihydrouridine synthase, putative n=4 Tax=R... 80 9e-14 UniRef50_A6DP07 Indole-3-glycerol phosphate synthase n=1 Tax=Len... 80 9e-14 UniRef50_Q1N033 Putative uncharacterized protein n=1 Tax=Bermane... 79 1e-13 UniRef50_C1SJZ7 tRNA-dihydrouridine synthase n=1 Tax=Denitrovibr... 79 1e-13 UniRef50_Q603E0 Putative HisA/HisF family protein n=1 Tax=Methyl... 79 1e-13 UniRef50_Q47C15 Dihydrouridine synthase, DuS n=1 Tax=Dechloromon... 79 1e-13 UniRef50_Q6A959 TIM-barrel enzyme, NifR3 family n=2 Tax=Propioni... 79 1e-13 UniRef50_O29545 Phosphoribosylformimino-5-aminoimidazole carboxa... 79 1e-13 UniRef50_Q1ZGI3 NifR3/Smm1 family protein n=1 Tax=Psychromonas s... 79 1e-13 UniRef50_B3LAS6 tRNA-dihydrouridine synthase, putative n=6 Tax=P... 79 2e-13 UniRef50_A2CB98 Putative uncharacterized protein n=1 Tax=Prochlo... 79 2e-13 UniRef50_Q6R3H4 Conserved protein n=1 Tax=Methylosinus sp. LW2 R... 79 2e-13 UniRef50_D1U4K9 Dihydrouridine synthase DuS n=1 Tax=Desulfovibri... 79 2e-13 UniRef50_Q9BTJ3 DUS1L protein (Fragment) n=7 Tax=Euteleostomi Re... 79 2e-13 UniRef50_Q4SBU2 Inosine-5'-monophosphate dehydrogenase (Fragment... 79 2e-13 UniRef50_D2QYD3 Histidine biosynthesis protein n=1 Tax=Pirellula... 78 2e-13 UniRef50_B9HRE5 Predicted protein (Fragment) n=11 Tax=Eukaryota ... 78 2e-13 UniRef50_C1DY86 Dihydrouridine synthase-like family protein n=1 ... 78 3e-13 UniRef50_Q1ISJ1 Indole-3-glycerol phosphate synthase n=1 Tax=Can... 78 3e-13 UniRef50_B7FXL2 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 78 3e-13 UniRef50_B1C9Q3 Putative uncharacterized protein n=1 Tax=Anaerof... 78 3e-13 UniRef50_D2VPF2 Predicted protein n=2 Tax=Naegleria gruberi RepI... 78 3e-13 UniRef50_C6QGP7 Histidine biosynthesis protein n=3 Tax=Rhizobial... 77 4e-13 UniRef50_Q88KX0 tRNA-dihydrouridine synthase A n=482 Tax=Bacteri... 77 4e-13 UniRef50_D2VK62 Dihydrouridine synthase, DuS n=1 Tax=Naegleria g... 77 4e-13 UniRef50_UPI00016C36C9 phosphoribosylformimino-5-aminoimidazole ... 77 4e-13 UniRef50_UPI000186DA49 tRNA-dihydrouridine synthase, putative n=... 77 5e-13 UniRef50_A6G755 Indole-3-glycerol-phosphate synthase n=1 Tax=Ple... 77 5e-13 UniRef50_A2EN54 Putative uncharacterized protein n=1 Tax=Trichom... 77 5e-13 UniRef50_A8QBG9 PP3111 protein, putative n=1 Tax=Brugia malayi R... 77 5e-13 UniRef50_B6JXB4 tRNA-dihydrouridine synthase n=1 Tax=Schizosacch... 77 5e-13 UniRef50_Q6C4K3 tRNA-dihydrouridine synthase 3 n=11 Tax=Saccharo... 77 6e-13 UniRef50_B1XI00 Dihydrouridine synthase A n=8 Tax=Chroococcales ... 77 6e-13 UniRef50_B9XLX7 Dihydrouridine synthase DuS n=3 Tax=Verrucomicro... 77 6e-13 UniRef50_Q73RG6 Dihydrouridine synthase, putative n=1 Tax=Trepon... 77 6e-13 UniRef50_UPI00015B403F PREDICTED: similar to MGC79829 protein n=... 77 6e-13 UniRef50_C0GDK9 Indole-3-glycerol-phosphate synthase n=1 Tax=Det... 77 7e-13 UniRef50_B7PD41 tRNA-dihydrouridine synthase, putative n=1 Tax=I... 77 7e-13 UniRef50_A2FU21 Putative uncharacterized protein n=1 Tax=Trichom... 77 7e-13 UniRef50_A2DHB4 Putative uncharacterized protein n=1 Tax=Trichom... 77 7e-13 UniRef50_C0QXB6 Dihydrouridine synthase-like (DUS-like) FMN-bind... 77 8e-13 UniRef50_B1ZZ77 Dihydrouridine synthase DuS n=2 Tax=Opitutaceae ... 76 9e-13 UniRef50_O53835 Probable tRNA-dihydrouridine synthase n=107 Tax=... 76 9e-13 UniRef50_Q2FS89 Histidine biosynthesis n=1 Tax=Methanospirillum ... 76 9e-13 UniRef50_Q0CMD2 TRNA-dihydrouridine synthase 1 n=18 Tax=Leotiomy... 76 9e-13 UniRef50_B9YRZ8 Indole-3-glycerol-phosphate synthase n=3 Tax=Nos... 76 1e-12 UniRef50_Q87N01 tRNA-dihydrouridine synthase C n=54 Tax=Gammapro... 76 1e-12 UniRef50_A6W1E8 Dihydrouridine synthase DuS n=1 Tax=Marinomonas ... 76 1e-12 UniRef50_Q4FQ57 Possible tRNA-dihydrouridine synthase n=24 Tax=G... 76 1e-12 UniRef50_B8FH09 Dihydrouridine synthase DuS n=1 Tax=Desulfatibac... 76 1e-12 UniRef50_B6BT49 tRNA-dihydrouridine synthase A n=4 Tax=SAR11 clu... 76 1e-12 UniRef50_A4RVX6 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 76 1e-12 UniRef50_C1F7P0 Indole-3-glycerol phosphate synthase n=1 Tax=Aci... 76 1e-12 UniRef50_C5X8Y0 Putative uncharacterized protein Sb02g020430 n=1... 76 1e-12 UniRef50_B0XNW3 Dihydrouridine synthase family protein, putative... 75 2e-12 UniRef50_Q127F8 Dihydrouridine synthase, DuS n=7 Tax=Proteobacte... 75 2e-12 UniRef50_D0MHI1 Indole-3-glycerol-phosphate synthase n=1 Tax=Rho... 75 2e-12 UniRef50_Q8L940 Pyridoxal biosynthesis protein PDX1.3 n=173 Tax=... 75 2e-12 UniRef50_B7K0H0 Indole-3-glycerol phosphate synthase n=18 Tax=ce... 75 2e-12 UniRef50_B0SXE6 TIM-barrel protein, nifR3 family n=2 Tax=Cauloba... 75 2e-12 UniRef50_D0J1P6 Dihydrouridine synthase, DuS n=7 Tax=cellular or... 75 2e-12 UniRef50_C8S7V0 HisA/hisF family protein n=1 Tax=Ferroglobus pla... 75 2e-12 UniRef50_B6K3Q0 tRNA dihydrouridine synthase Dus3 n=1 Tax=Schizo... 75 2e-12 UniRef50_Q9CJW1 tRNA-dihydrouridine synthase C n=7 Tax=Gammaprot... 75 3e-12 UniRef50_B8C4H3 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 75 3e-12 UniRef50_C6J447 Indole-3-glycerol phosphate synthase n=1 Tax=Pae... 75 3e-12 UniRef50_C6A2A3 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 75 3e-12 UniRef50_Q2SJJ8 TRNA-dihydrouridine synthase n=7 Tax=Gammaproteo... 75 3e-12 UniRef50_O83945 Probable tRNA-dihydrouridine synthase n=4 Tax=Tr... 74 3e-12 UniRef50_A6C0W3 HisA/HisF family protein, putative n=1 Tax=Planc... 74 3e-12 UniRef50_B8DIS9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibri... 74 3e-12 UniRef50_P49572 Indole-3-glycerol phosphate synthase, chloroplas... 74 3e-12 UniRef50_UPI00015B6197 PREDICTED: similar to CG10463-PA n=1 Tax=... 74 3e-12 UniRef50_A9V4A0 Predicted protein n=1 Tax=Monosiga brevicollis R... 74 4e-12 UniRef50_Q9NX74 tRNA-dihydrouridine synthase 2-like n=35 Tax=Met... 74 4e-12 UniRef50_A8J281 Predicted protein (Fragment) n=3 Tax=cellular or... 74 4e-12 UniRef50_Q1CZH5 Indole-3-glycerol phosphate synthase n=2 Tax=Cys... 74 4e-12 UniRef50_D0LY25 TIM-barrel protein, yjbN family n=3 Tax=Bacteria... 74 4e-12 UniRef50_A4HAN2 Putative uncharacterized protein n=3 Tax=Leishma... 74 4e-12 UniRef50_Q5CRK5 Ylr401cp-like protein with 2 CCCH domains plus D... 74 4e-12 UniRef50_Q1H0R8 Histidine biosynthesis n=1 Tax=Methylobacillus f... 74 4e-12 UniRef50_Q72EB7 Dihydrouridine synthase family protein n=4 Tax=D... 74 4e-12 UniRef50_A0B616 Histidine biosynthesis n=1 Tax=Methanosaeta ther... 74 5e-12 UniRef50_B9M3C8 Dihydrouridine synthase DuS n=2 Tax=Desulfuromon... 74 5e-12 UniRef50_Q9VJ06 CG10495 n=12 Tax=Drosophila RepID=Q9VJ06_DROME 74 5e-12 UniRef50_D1N0Y1 Dihydrouridine synthase DuS n=1 Tax=Victivallis ... 74 5e-12 UniRef50_Q4D174 Dihydrouridine synthase (Dus), putative n=2 Tax=... 74 5e-12 UniRef50_B6A9H7 Dihydrouridine synthase family protein n=2 Tax=E... 74 5e-12 UniRef50_Q0BTY5 Indole-3-glycerol phosphate synthase n=16 Tax=Al... 74 5e-12 UniRef50_D1N5U0 Dihydrouridine synthase DuS n=1 Tax=Victivallis ... 74 5e-12 UniRef50_C9RM69 TIM-barrel protein, yjbN family n=1 Tax=Fibrobac... 74 6e-12 UniRef50_Q9V1G3 Indole-3-glycerol phosphate synthase n=11 Tax=Eu... 74 6e-12 UniRef50_Q3B2C7 Indole-3-glycerol phosphate synthase n=11 Tax=Ch... 74 6e-12 UniRef50_B3E8L6 Dihydrouridine synthase, DuS n=1 Tax=Geobacter l... 74 6e-12 UniRef50_C1EGQ3 Predicted protein n=2 Tax=Micromonas RepID=C1EGQ... 74 6e-12 UniRef50_A4J147 Indole-3-glycerol phosphate synthase n=1 Tax=Des... 74 7e-12 UniRef50_A8TG14 Histidine biosynthesis protein n=1 Tax=Methanoco... 74 7e-12 UniRef50_Q1J2A4 Dihydrouridine synthase, DuS n=3 Tax=Deinococcus... 73 7e-12 UniRef50_C9ZWQ2 tRNA-dihydrouridine synthase 1, putative n=2 Tax... 73 7e-12 UniRef50_A9KG09 NIFR3-like protein n=6 Tax=Coxiella burnetii Rep... 73 8e-12 UniRef50_A6GHV6 Dihydrouridine synthase family protein n=1 Tax=P... 73 8e-12 UniRef50_C8W1S8 Indole-3-glycerol-phosphate synthase n=1 Tax=Des... 73 9e-12 UniRef50_A8PLS2 tRNA-dihydrouridine synthase A n=1 Tax=Rickettsi... 73 1e-11 UniRef50_C6XDW4 Histidine biosynthesis protein n=1 Tax=Methylovo... 73 1e-11 UniRef50_B1GZV7 Putative tRNA-dihydrouridine synthase n=1 Tax=un... 73 1e-11 UniRef50_Q2LUD7 Indole-3-glycerol phosphate synthase n=1 Tax=Syn... 73 1e-11 UniRef50_Q0A6E8 Indole-3-glycerol phosphate synthase n=5 Tax=Pro... 72 1e-11 UniRef50_C9M7Q0 Dihydrouridine synthase family protein n=1 Tax=J... 72 1e-11 UniRef50_Q22A31 TIM-barrel protein, yjbN family n=2 Tax=cellular... 72 1e-11 UniRef50_A5EVG3 Indole-3-glycerol phosphate synthase n=1 Tax=Dic... 72 1e-11 UniRef50_Q8EAJ0 tRNA-dihydrouridine synthase A n=121 Tax=Bacteri... 72 2e-11 UniRef50_Q2NEW9 Putative uncharacterized protein n=1 Tax=Methano... 72 2e-11 UniRef50_B5YGU5 Indole-3-glycerol phosphate synthase n=1 Tax=The... 72 2e-11 UniRef50_A2QA98 Similarity to hypothetical protein SPBC36B7.04 -... 72 2e-11 UniRef50_C8QWB5 Dihydrouridine synthase DuS n=1 Tax=Desulfurivib... 72 2e-11 UniRef50_B0EC90 tRNA-dihydrouridine synthase, putative n=2 Tax=E... 72 2e-11 UniRef50_D0MWM4 tRNA-dihydrouridine synthase 3 n=1 Tax=Phytophth... 72 2e-11 UniRef50_A7HK00 Dihydrouridine synthase DuS n=8 Tax=Thermotogace... 72 2e-11 UniRef50_B8I0V0 Indole-3-glycerol phosphate synthase n=3 Tax=Fir... 72 2e-11 UniRef50_D1JF95 Putative phosphoribosylformimino-5-aminoimidazol... 72 2e-11 UniRef50_O74553 tRNA-dihydrouridine synthase 4 n=1 Tax=Schizosac... 72 2e-11 UniRef50_Q88LF2 tRNA-dihydrouridine synthase C n=38 Tax=cellular... 72 2e-11 UniRef50_B2UL06 Phosphoribosylformimino-5-aminoimidazole carboxa... 72 2e-11 UniRef50_B4U9S2 Indole-3-glycerol-phosphate synthase n=1 Tax=Hyd... 72 2e-11 UniRef50_P53759 tRNA-dihydrouridine synthase 1 n=19 Tax=Ascomyco... 72 2e-11 UniRef50_D0NZC8 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 72 3e-11 UniRef50_B8F9B4 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 72 3e-11 UniRef50_Q5ZVH8 Zinc binding TIM barrel protein, YjbN family n=6... 71 3e-11 UniRef50_C0N3H2 Histidine biosynthesis protein n=1 Tax=Methyloph... 71 3e-11 UniRef50_A8ICF9 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 71 3e-11 UniRef50_C0NEG2 tRNA-dihydrouridine synthase n=5 Tax=Ajellomyces... 71 3e-11 UniRef50_A0EAZ6 Chromosome undetermined scaffold_87, whole genom... 71 4e-11 UniRef50_C8X0F5 Dihydrouridine synthase DuS n=1 Tax=Desulfohalob... 71 4e-11 UniRef50_A8F480 Dihydrouridine synthase DuS n=1 Tax=Thermotoga l... 71 4e-11 UniRef50_Q0G4J3 HisA/HisF family protein, putative n=1 Tax=Fulvi... 71 4e-11 UniRef50_A1HS67 Indole-3-glycerol-phosphate synthase n=4 Tax=Vei... 71 4e-11 UniRef50_B2S5Z1 Indole-3-glycerol phosphate synthase n=45 Tax=Al... 71 5e-11 UniRef50_C2KZB3 Indole-3-glycerol-phosphate synthase n=1 Tax=Ori... 71 5e-11 UniRef50_Q9KT00 tRNA-dihydrouridine synthase C n=75 Tax=Gammapro... 71 5e-11 UniRef50_B0MC46 Putative uncharacterized protein n=1 Tax=Anaeros... 71 6e-11 UniRef50_Q9ZLB6 Probable tRNA-dihydrouridine synthase n=23 Tax=E... 71 6e-11 UniRef50_A8ZZX0 Indole-3-glycerol phosphate synthase n=1 Tax=Des... 70 6e-11 UniRef50_Q30SM1 Indole-3-glycerol phosphate synthase n=31 Tax=Ep... 70 6e-11 UniRef50_Q9VY45 CG1434 n=20 Tax=Arthropoda RepID=Q9VY45_DROME 70 7e-11 UniRef50_UPI0001744BDA indole-3-glycerol-phosphate synthase n=1 ... 70 7e-11 UniRef50_B0NZZ2 Putative uncharacterized protein n=3 Tax=Clostri... 70 8e-11 UniRef50_P03964 Indole-3-glycerol phosphate synthase n=11 Tax=Ba... 70 8e-11 UniRef50_C8PLW3 Putative dihydrouridine synthase n=1 Tax=Trepone... 70 9e-11 UniRef50_A7NDQ7 tRNA dihydrouridine synthase n=17 Tax=Francisell... 70 9e-11 UniRef50_D0P0N4 tRNA-dihydrouridine synthase, putative n=1 Tax=P... 70 9e-11 UniRef50_C7NBC4 Dihydrouridine synthase DuS n=3 Tax=Leptotrichia... 70 1e-10 UniRef50_Q3JA76 NADH-flavin oxidoreductase/NADH oxidase n=4 Tax=... 69 1e-10 UniRef50_B8C389 Predicted protein n=1 Tax=Thalassiosira pseudona... 69 1e-10 UniRef50_Q3AL94 Indole-3-glycerol phosphate synthase n=13 Tax=Cy... 69 1e-10 UniRef50_Q08111 Probable tRNA-dihydrouridine synthase n=17 Tax=A... 69 1e-10 UniRef50_C4QAZ6 tRNA-dihydrouridine synthase, putative n=1 Tax=S... 69 1e-10 UniRef50_A6RVN2 Putative uncharacterized protein n=2 Tax=Sclerot... 69 1e-10 UniRef50_C4Z9Z2 Imidazole glycerol phosphate synthase subunit Hi... 69 1e-10 UniRef50_A1AT39 Dihydrouridine synthase, DuS n=7 Tax=Desulfuromo... 69 1e-10 UniRef50_C1ZC07 HisA/hisF family protein n=1 Tax=Planctomyces li... 69 1e-10 UniRef50_B1C3U6 Putative uncharacterized protein n=1 Tax=Clostri... 69 1e-10 UniRef50_A2F0D1 Putative uncharacterized protein n=1 Tax=Trichom... 69 1e-10 UniRef50_C9LSI3 Indole-3-glycerol phosphate synthase n=1 Tax=Sel... 69 1e-10 UniRef50_A6QPA8 DUS4L protein n=2 Tax=Eutheria RepID=A6QPA8_BOVIN 69 2e-10 UniRef50_Q2RTX4 Dihydrouridine synthase TIM-barrel protein yjbN ... 69 2e-10 UniRef50_Q0EWN8 Indole-3-glycerol phosphate synthase n=1 Tax=Mar... 69 2e-10 UniRef50_Q9HGN6 tRNA-dihydrouridine synthase 1 n=1 Tax=Schizosac... 69 2e-10 UniRef50_Q465F6 Indole-3-glycerol phosphate synthase n=3 Tax=Met... 69 2e-10 UniRef50_C2KW54 Dihydrouridine synthase, DuS n=1 Tax=Oribacteriu... 69 2e-10 UniRef50_B1YLS2 Indole-3-glycerol phosphate synthase n=77 Tax=Ba... 69 2e-10 UniRef50_Q72NP6 Indole-3-glycerol phosphate synthase n=4 Tax=Lep... 69 2e-10 UniRef50_A2SJ37 HisA/HisF family protein, putative n=3 Tax=Burkh... 69 2e-10 UniRef50_Q0W625 Indole-3-glycerol phosphate synthase n=2 Tax=Eur... 69 2e-10 UniRef50_C5FBD9 tRNA-dihydrouridine synthase 1 n=1 Tax=Microspor... 69 2e-10 UniRef50_Q92370 N-(5'-phosphoribosyl)anthranilate isomerase n=44... 69 2e-10 UniRef50_A7EMF2 Putative uncharacterized protein n=2 Tax=Sclerot... 69 2e-10 UniRef50_UPI0001C3129C dihydrouridine synthase DuS n=1 Tax=Conex... 69 2e-10 UniRef50_D1Z6W7 Whole genome shotgun sequence assembly, scaffold... 68 2e-10 UniRef50_C8PJN4 Indole-3-glycerol phosphate synthase n=1 Tax=Cam... 68 2e-10 UniRef50_Q86L21 Putative uncharacterized protein n=1 Tax=Dictyos... 68 3e-10 UniRef50_UPI000038257B COG1902: NADH:flavin oxidoreductases, Old... 68 3e-10 UniRef50_A7IL67 Histidine biosynthesis protein n=2 Tax=Alphaprot... 68 3e-10 UniRef50_B2UM21 Dihydrouridine synthase DuS n=1 Tax=Akkermansia ... 68 3e-10 UniRef50_Q10184 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 68 3e-10 UniRef50_Q5SMC7 tRNA-dihydrouridine synthase n=3 Tax=Thermus Rep... 68 3e-10 UniRef50_D2LTR9 Indole-3-glycerol-phosphate synthase n=1 Tax=Bac... 68 3e-10 UniRef50_Q0AJQ0 Indole-3-glycerol phosphate synthase n=5 Tax=Pro... 68 3e-10 UniRef50_B7GE60 Predicted protein n=11 Tax=cellular organisms Re... 67 4e-10 UniRef50_C0W0L6 Indole-3-glycerol-phosphate synthase n=1 Tax=Act... 67 4e-10 UniRef50_C6WWE3 Histidine biosynthesis protein n=1 Tax=Methylote... 67 4e-10 UniRef50_Q04VP3 TRNA-dihydrouridine synthase n=4 Tax=Leptospira ... 67 4e-10 UniRef50_B0CNE7 Predicted protein n=3 Tax=Agaricales RepID=B0CNE... 67 4e-10 UniRef50_A4RM51 Putative uncharacterized protein n=2 Tax=Sacchar... 67 4e-10 UniRef50_C6CUD5 Indole-3-glycerol-phosphate synthase n=3 Tax=Bac... 67 5e-10 UniRef50_Q8CWK7 tRNA-dihydrouridine synthase A n=32 Tax=Gammapro... 67 5e-10 UniRef50_UPI00006DC778 hypothetical protein CdifQ_04001754 n=1 T... 67 5e-10 UniRef50_A4SG41 Indole-3-glycerol phosphate synthase n=2 Tax=Bac... 67 5e-10 UniRef50_Q7RX85 Putative uncharacterized protein n=1 Tax=Neurosp... 67 6e-10 UniRef50_B8BQ55 Predicted protein n=1 Tax=Thalassiosira pseudona... 67 6e-10 UniRef50_A8PRW0 Putative uncharacterized protein n=1 Tax=Malasse... 67 7e-10 UniRef50_C0ZCE3 Indole-3-glycerol phosphate synthase n=2 Tax=Bac... 67 7e-10 UniRef50_B6KUE9 Dihydrouridine synthase domain-containing protei... 67 7e-10 UniRef50_Q9UTH9 tRNA-dihydrouridine synthase 3 n=1 Tax=Schizosac... 67 7e-10 UniRef50_UPI0000E479FB PREDICTED: similar to MGC108441 protein n... 67 7e-10 UniRef50_B9KXB9 Indole-3-glycerol phosphate synthase n=4 Tax=Bac... 67 8e-10 UniRef50_C6C1D4 Indole-3-glycerol-phosphate synthase n=1 Tax=Des... 67 8e-10 UniRef50_B7G5S1 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 67 8e-10 UniRef50_C7P1Q4 Indole-3-glycerol-phosphate synthase n=5 Tax=Hal... 66 1e-09 UniRef50_Q5V138 Indole-3-glycerol phosphate synthase n=7 Tax=Hal... 66 1e-09 UniRef50_Q4PIC3 Putative uncharacterized protein n=1 Tax=Ustilag... 66 1e-09 UniRef50_B8HFM3 TIM-barrel protein, nifR3 family n=4 Tax=Actinom... 66 1e-09 UniRef50_A4RU69 Predicted protein n=3 Tax=Chlorophyta RepID=A4RU... 66 1e-09 UniRef50_A5Z3X7 Putative uncharacterized protein n=2 Tax=Clostri... 66 1e-09 UniRef50_C4Z138 Indole-3-glycerol phosphate synthase n=2 Tax=Clo... 66 1e-09 UniRef50_A2DYY3 Putative uncharacterized protein n=1 Tax=Trichom... 66 1e-09 UniRef50_Q2S1Z5 Indole-3-glycerol phosphate synthase n=1 Tax=Sal... 66 1e-09 UniRef50_B2UDK9 Indole-3-glycerol phosphate synthase n=13 Tax=Ba... 66 1e-09 UniRef50_B2KES4 Dihydrouridine synthase DuS n=1 Tax=Elusimicrobi... 66 1e-09 UniRef50_A9A299 Indole-3-glycerol-phosphate synthase n=2 Tax=Tha... 66 1e-09 UniRef50_C1TL75 tRNA-dihydrouridine synthase n=2 Tax=Synergistac... 66 2e-09 UniRef50_Q4PBU9 Putative uncharacterized protein n=2 Tax=Ustilag... 66 2e-09 UniRef50_D1YXT1 Putative uncharacterized protein n=1 Tax=Methano... 66 2e-09 UniRef50_D1YNQ7 Indole-3-glycerol phosphate synthase n=1 Tax=Vei... 65 2e-09 UniRef50_A1UF85 Pyridoxine biosynthesis protein n=3 Tax=Mycobact... 65 2e-09 UniRef50_A1AW94 TIM-barrel protein, yjbN family n=2 Tax=Gammapro... 65 2e-09 UniRef50_C3WAT9 2-nitropropane dioxygenase n=5 Tax=Fusobacterium... 65 2e-09 UniRef50_Q03148 Pyridoxine biosynthesis protein SNZ1 n=262 Tax=c... 65 2e-09 UniRef50_Q583Y8 TRNA-dihydrouridine synthase 4, putative n=4 Tax... 65 3e-09 UniRef50_B0C3E9 tRNA-dihydrouridine synthase A n=4 Tax=Bacteria ... 65 3e-09 UniRef50_B8LBY8 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 65 3e-09 UniRef50_A2RK21 Indole-3-glycerol phosphate synthase n=45 Tax=Ba... 65 3e-09 UniRef50_C3N6C8 Pyridoxal biosynthesis lyase pdxS n=28 Tax=cellu... 65 3e-09 UniRef50_D1BQN6 Bifunctional indole-3-glycerol phosphate synthas... 64 3e-09 UniRef50_D1AMN2 Dihydrouridine synthase DuS n=3 Tax=Bacteria Rep... 64 3e-09 UniRef50_C1KVS7 Indole-3-glycerol phosphate synthase n=28 Tax=Ba... 64 3e-09 UniRef50_A8MRX7 Uncharacterized protein At3g63510.2 n=5 Tax=Arab... 64 3e-09 UniRef50_Q1AU90 Indole-3-glycerol phosphate synthase n=1 Tax=Rub... 64 3e-09 UniRef50_A9V413 Predicted protein n=1 Tax=Monosiga brevicollis R... 64 4e-09 UniRef50_C4Q4G5 tRNA-dihydrouridine synthase, putative n=1 Tax=S... 64 4e-09 UniRef50_B2A0N8 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 64 4e-09 UniRef50_A8F3E7 N-acylglucosamine-6-phosphate 2-epimerase n=1 Ta... 64 4e-09 UniRef50_A8NM76 N-(5'-phosphoribosyl)anthranilate isomerase n=1 ... 64 4e-09 UniRef50_A0B9E0 Indole-3-glycerol phosphate synthase n=1 Tax=Met... 64 4e-09 UniRef50_Q03X00 Indole-3-glycerol phosphate synthase n=13 Tax=La... 64 4e-09 UniRef50_UPI0001C3231B Indole-3-glycerol-phosphate synthase n=1 ... 64 5e-09 UniRef50_C8WX60 Indole-3-glycerol-phosphate synthase n=2 Tax=Ali... 64 5e-09 UniRef50_A3PE78 Putative uncharacterized protein n=1 Tax=Prochlo... 64 5e-09 UniRef50_B8ZUG3 Pyridoxal biosynthesis lyase pdxS n=332 Tax=cell... 64 5e-09 UniRef50_A9BHQ5 Indole-3-glycerol phosphate synthase n=1 Tax=Pet... 64 5e-09 UniRef50_A2ST44 Histidine biosynthesis protein n=1 Tax=Methanoco... 64 5e-09 UniRef50_A5DTS1 tRNA-dihydrouridine synthase 3 n=2 Tax=Saccharom... 64 5e-09 UniRef50_A4HJH5 Dihydrouridine synthase (Dus), putative n=3 Tax=... 64 6e-09 UniRef50_C9KKE5 Dihydroorotate oxidase n=6 Tax=Bacteria RepID=C9... 64 6e-09 UniRef50_Q0STG2 Dihydrouridine synthase family protein n=27 Tax=... 64 6e-09 UniRef50_A5CW14 Indole-3-glycerol phosphate synthase n=3 Tax=Gam... 64 6e-09 UniRef50_B0SFJ9 Indole-3-glycerol-phosphate synthase n=3 Tax=Lep... 64 6e-09 UniRef50_UPI0000D5303F indole-3-glycerol-phosphate synthase n=1 ... 64 7e-09 UniRef50_B0TFP7 Indole-3-glycerol phosphate synthase n=2 Tax=Hel... 63 7e-09 UniRef50_C5LIP5 Ornithine decarboxylase n=4 Tax=Perkinsus marinu... 63 9e-09 UniRef50_D0N427 N-(5'-phosphoribosyl)anthranilate isomerase n=1 ... 63 9e-09 UniRef50_A4AAB0 tRNA-dihydrouridine synthase C n=6 Tax=Gammaprot... 63 9e-09 UniRef50_A6DU09 Dihydrouridine synthase family protein n=1 Tax=L... 63 9e-09 UniRef50_UPI0001B4BBA7 anthranilate phosphoribotransferase n=1 T... 63 1e-08 UniRef50_B5H1G9 Indole-3-glycerol-phosphate synthase n=1 Tax=Str... 63 1e-08 UniRef50_UPI0000586CAD PREDICTED: similar to Dus1l protein n=1 T... 63 1e-08 UniRef50_A0LJ58 Indole-3-glycerol phosphate synthase n=2 Tax=Del... 63 1e-08 UniRef50_C0W3B1 Indole-3-glycerol-phosphate synthase n=1 Tax=Act... 62 1e-08 UniRef50_C3K307 Indole-3-glycerol phosphate synthase n=120 Tax=c... 62 1e-08 UniRef50_Q8TXM0 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 62 1e-08 UniRef50_Q6R3G3 Conserved protein n=1 Tax=Methylomonas sp. LW13 ... 62 1e-08 UniRef50_Q06053 tRNA-dihydrouridine synthase 3 n=11 Tax=Saccharo... 62 1e-08 UniRef50_Q6GH35 Indole-3-glycerol phosphate synthase n=53 Tax=St... 62 2e-08 UniRef50_B5YJH1 Dihydroorotate dehydrogenase n=24 Tax=Bacteria R... 62 2e-08 UniRef50_C7LZ72 Indole-3-glycerol-phosphate synthase n=1 Tax=Aci... 62 2e-08 UniRef50_Q6K306 cDNA clone:001-026-D08, full insert sequence n=1... 62 2e-08 UniRef50_O74731 tRNA-dihydrouridine synthase 2 n=2 Tax=Schizosac... 62 2e-08 UniRef50_B7J4N8 tRNA-dihydrouridine synthase A n=2 Tax=Acidithio... 62 3e-08 UniRef50_A9BJH4 Dihydroorotate dehydrogenase n=45 Tax=Bacteria R... 62 3e-08 UniRef50_A4IM35 Dihydroorotate dehydrogenase n=348 Tax=Bacteria ... 62 3e-08 UniRef50_Q26BH5 Indole-3-glycerol phosphate synthase, IGPS n=1 T... 61 3e-08 UniRef50_A5KQG7 Putative uncharacterized protein n=1 Tax=Ruminoc... 61 3e-08 UniRef50_P24920 N-(5'-phospho-ribosyl)anthranilate isomerase n=1... 61 3e-08 UniRef50_C1I8I7 N-acetylmannosamine-6-phosphate 2-epimerase n=7 ... 61 3e-08 UniRef50_Q0SMC0 Histidine phosphokinase/phophatase, putative n=1... 61 3e-08 UniRef50_A3ZZD2 Phosphoribosylformimino-5-aminoimidazole carboxa... 61 4e-08 UniRef50_P40545 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 61 4e-08 UniRef50_C5CIM1 N-acylglucosamine-6-phosphate 2-epimerase n=1 Ta... 61 4e-08 UniRef50_C5DS92 ZYRO0B14872p n=1 Tax=Zygosaccharomyces rouxii Re... 61 4e-08 UniRef50_Q12ZK1 Indole-3-glycerol phosphate synthase n=1 Tax=Met... 61 5e-08 UniRef50_Q0CZL3 tRNA-dihydrouridine synthase 3 n=19 Tax=Leotiomy... 61 5e-08 UniRef50_Q54QJ2 tRNA-dihydrouridine synthase 2-like protein n=1 ... 61 5e-08 UniRef50_C3Q9B4 Dihydrouridine synthase n=18 Tax=Bacteroidales R... 61 5e-08 UniRef50_A7AWB5 Dihydrouridine synthase (Dus) domain containing ... 61 5e-08 UniRef50_Q1QMJ9 Indole-3-glycerol phosphate synthase n=82 Tax=Ba... 61 5e-08 UniRef50_B3QW78 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 60 6e-08 UniRef50_B2RZT4 NIFR3-like protein n=23 Tax=Borrelia RepID=B2RZT... 60 7e-08 UniRef50_Q468H4 NADH peroxidase n=5 Tax=cellular organisms RepID... 60 7e-08 UniRef50_O31546 Probable tRNA-dihydrouridine synthase 2 n=107 Ta... 60 7e-08 UniRef50_C4FAV3 Putative uncharacterized protein n=1 Tax=Collins... 60 7e-08 UniRef50_A8MDA4 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 60 8e-08 UniRef50_Q6C002 YALI0F29205p n=1 Tax=Yarrowia lipolytica RepID=Q... 60 8e-08 UniRef50_Q12ZA4 Putative uncharacterized protein n=5 Tax=Euryarc... 60 8e-08 UniRef50_B7APJ6 Putative uncharacterized protein n=1 Tax=Bactero... 60 8e-08 UniRef50_B3T8W2 Putative indole-3-glycerol phosphate synthase n=... 60 9e-08 UniRef50_O28668 Anthranilate phosphoribosyltransferase n=4 Tax=E... 60 1e-07 UniRef50_UPI000186E4C9 tRNA-dihydrouridine synthase, putative n=... 60 1e-07 UniRef50_D1B5R0 Dihydrouridine synthase DuS n=1 Tax=Thermanaerov... 60 1e-07 UniRef50_Q09E70 Thiazole biosynthesis protein ThiG n=1 Tax=Stigm... 59 1e-07 UniRef50_C9SVF6 tRNA-dihydrouridine synthase n=1 Tax=Verticilliu... 59 1e-07 UniRef50_C6NVP5 tRNA-dihydrouridine synthase A n=1 Tax=Acidithio... 59 1e-07 UniRef50_B1L6Q8 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 59 1e-07 UniRef50_UPI0001BC2F14 dihydrouridine synthase DuS n=1 Tax=Butyr... 59 1e-07 UniRef50_C7N9A2 Indole-3-glycerol-phosphate synthase n=2 Tax=Lep... 59 1e-07 UniRef50_A4XZC5 Indole-3-glycerol phosphate synthase n=168 Tax=c... 59 1e-07 UniRef50_C7JI48 Enoyl[acyl-carrier-protein (ACP)] reductase n=8 ... 59 1e-07 UniRef50_D1APV9 Indole-3-glycerol-phosphate synthase n=1 Tax=Seb... 59 1e-07 UniRef50_A9W195 Dihydrouridine synthase DuS n=41 Tax=Bacteria Re... 59 1e-07 UniRef50_B8HZU1 Photosystem I assembly BtpA n=5 Tax=Clostridiale... 59 1e-07 UniRef50_UPI000180C428 PREDICTED: similar to tRNA-dihydrouridine... 59 2e-07 UniRef50_C6XGY7 tRNA-dihydrouridine synthase A n=1 Tax=Candidatu... 59 2e-07 UniRef50_B0TE53 Biotin synthase n=2 Tax=Clostridia RepID=BIOB_HELMI 59 2e-07 UniRef50_Q2NFE8 TrpC n=1 Tax=Methanosphaera stadtmanae DSM 3091 ... 59 2e-07 UniRef50_B8MSD1 tRNA dihydrouridine synthase (Smm1), putative n=... 59 2e-07 UniRef50_A2CB59 Indole-3-glycerol phosphate synthase n=22 Tax=Ba... 59 2e-07 UniRef50_C0D969 Putative uncharacterized protein n=1 Tax=Clostri... 59 2e-07 UniRef50_C9KP46 Oxidoreductase, FAD/FMN-binding n=2 Tax=Clostrid... 59 2e-07 UniRef50_A7HXZ6 Indole-3-glycerol phosphate synthase n=4 Tax=Alp... 59 2e-07 UniRef50_B4YSU4 BaiH n=2 Tax=Clostridium hylemonae RepID=B4YSU4_... 59 2e-07 UniRef50_Q82KQ8 Putative oxidoreductase n=1 Tax=Streptomyces ave... 59 2e-07 UniRef50_B8C9N7 Predicted protein n=1 Tax=Thalassiosira pseudona... 59 2e-07 UniRef50_Q1G992 Dihydroorotate dehydrogenase n=3 Tax=Lactobacill... 59 2e-07 UniRef50_C0QB73 TrpC n=1 Tax=Desulfobacterium autotrophicum HRM2... 59 2e-07 UniRef50_A9UW45 Predicted protein n=1 Tax=Monosiga brevicollis R... 58 2e-07 UniRef50_UPI0001BCB21D enoyl-[acyl-carrier-protein] reductase n=... 58 2e-07 UniRef50_Q7UQJ1 Putative uncharacterized protein n=1 Tax=Rhodopi... 58 3e-07 UniRef50_D1AI07 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=... 58 3e-07 UniRef50_B7FYN1 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 58 3e-07 UniRef50_A1RXV6 Geranylgeranylglyceryl phosphate synthase n=4 Ta... 58 3e-07 UniRef50_Q0JEG3 Os04g0278900 protein n=3 Tax=Oryza sativa RepID=... 58 3e-07 UniRef50_A7EKL8 tRNA-dihydrouridine synthase 3 n=10 Tax=Leotiomy... 58 3e-07 UniRef50_B8P1L7 Predicted protein (Fragment) n=3 Tax=Basidiomyco... 58 3e-07 UniRef50_C1XIL7 NADH:flavin oxidoreductase n=1 Tax=Meiothermus r... 58 4e-07 UniRef50_O27697 Tryptophan synthase alpha chain n=3 Tax=Methanob... 58 4e-07 UniRef50_UPI0000E499F9 PREDICTED: similar to glycolate oxidase; ... 58 4e-07 UniRef50_D2LUG6 2,4-dienoyl-CoA reductase (NADPH) n=1 Tax=Bacill... 58 4e-07 UniRef50_Q87AY2 tRNA-dihydrouridine synthase A n=15 Tax=Bacteria... 58 4e-07 UniRef50_A7EHJ6 Putative uncharacterized protein n=1 Tax=Sclerot... 58 4e-07 UniRef50_Q9FI41 Emb|CAB87804.1 n=16 Tax=Embryophyta RepID=Q9FI41... 57 4e-07 UniRef50_B3RND8 Putative uncharacterized protein n=1 Tax=Trichop... 57 4e-07 UniRef50_Q02YU5 Putative N-acetylmannosamine-6-phosphate 2-epime... 57 4e-07 UniRef50_B1JA40 2-nitropropane dioxygenase NPD n=11 Tax=Proteoba... 57 4e-07 UniRef50_P21795 Lactate 2-monooxygenase n=24 Tax=Bacteria RepID=... 57 5e-07 UniRef50_UPI0001C41F37 tRNA-dihydrouridine synthase DusA2 n=1 Ta... 57 5e-07 UniRef50_C7NTV9 Dihydropyrimidine dehydrogenase n=10 Tax=Halobac... 57 5e-07 UniRef50_B7GBC4 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 57 5e-07 UniRef50_Q466J2 NADH-dependent flavine oxidoreductase n=1 Tax=Me... 57 5e-07 UniRef50_A5EXU5 TRNA-dihydrouridine synthase A n=1 Tax=Dicheloba... 57 6e-07 UniRef50_C0SE35 tRNA-dihydrouridine synthase B n=1 Tax=Paracocci... 57 6e-07 UniRef50_Q01YA2 Dihydroorotate dehydrogenase n=5 Tax=Bacteria Re... 57 6e-07 UniRef50_A8ZX83 Dihydrouridine synthase DuS n=1 Tax=Desulfococcu... 57 7e-07 UniRef50_D2MIW0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)m... 57 7e-07 UniRef50_Q5HJT5 Probable tRNA-dihydrouridine synthase n=92 Tax=F... 57 7e-07 UniRef50_P32382 NADH oxidase n=1 Tax=Thermoanaerobacter brockii ... 57 7e-07 UniRef50_B1HS08 2-nitropropane dioxygenase n=2 Tax=Bacillaceae R... 57 8e-07 UniRef50_Q2FKX6 Tryptophan synthase alpha chain n=1 Tax=Methanos... 57 8e-07 UniRef50_C8WHP0 Dihydroorotate dehydrogenase family protein n=3 ... 57 8e-07 UniRef50_P32370 NADH-dependent flavin oxidoreductase n=4 Tax=Clo... 57 8e-07 UniRef50_Q2NEG1 PyrD n=1 Tax=Methanosphaera stadtmanae DSM 3091 ... 56 9e-07 UniRef50_B7GNV1 N-acylglucosamine-6-phosphate 2-epimerase n=10 T... 56 9e-07 UniRef50_Q1GF08 L-lactate dehydrogenase (Cytochrome) n=10 Tax=Rh... 56 1e-06 UniRef50_Q6MQA5 2-nitropropane dioxygenase n=1 Tax=Bdellovibrio ... 56 1e-06 UniRef50_A0AMC4 Putative N-acetylmannosamine-6-phosphate 2-epime... 56 1e-06 UniRef50_C4G9N4 Putative uncharacterized protein n=1 Tax=Shuttle... 56 1e-06 UniRef50_A5N0D9 Predicted enoate reductase n=2 Tax=Clostridium k... 56 1e-06 UniRef50_A1BHW3 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=... 56 1e-06 UniRef50_B7APY3 Putative uncharacterized protein n=1 Tax=Bactero... 56 1e-06 UniRef50_C8W700 Dihydroorotate dehydrogenase family protein n=2 ... 56 1e-06 UniRef50_C6W0Z1 Geranylgeranylglyceryl phosphate synthase n=2 Ta... 56 1e-06 UniRef50_A2QAU6 tRNA-dihydrouridine synthase 3 n=6 Tax=Leotiomyc... 56 1e-06 UniRef50_UPI000038242A COG0042: tRNA-dihydrouridine synthase n=1... 56 1e-06 UniRef50_A1VTD5 NADH:flavin oxidoreductase/NADH oxidase n=2 Tax=... 56 1e-06 UniRef50_A6LJ97 Dihydroorotate dehydrogenase family protein n=2 ... 56 1e-06 UniRef50_A1X3A1 Putative NADH:flavin oxidoreductase n=2 Tax=Anae... 55 2e-06 UniRef50_A4ECL7 Putative uncharacterized protein n=1 Tax=Collins... 55 2e-06 UniRef50_A8AAQ2 Photosystem I assembly BtpA n=1 Tax=Ignicoccus h... 55 2e-06 UniRef50_C1XQE2 Indole-3-glycerol phosphate synthase n=3 Tax=Dei... 55 2e-06 UniRef50_B9SRY4 Putative uncharacterized protein n=1 Tax=Ricinus... 55 2e-06 UniRef50_Q2C3Y8 Putative oxidoreductase protein n=3 Tax=Gammapro... 55 2e-06 UniRef50_A2R0D9 Catalytic activity: n=20 Tax=cellular organisms ... 55 2e-06 UniRef50_A7I924 Histidine biosynthesis n=3 Tax=Methanomicrobiale... 55 2e-06 UniRef50_C7PJL9 2-nitropropane dioxygenase NPD n=1 Tax=Chitinoph... 55 2e-06 UniRef50_Q1MQG1 Dihydroorotate dehydrogenase n=2 Tax=Deltaproteo... 55 2e-06 UniRef50_A5F2I8 Putative uncharacterized protein n=2 Tax=Vibrio ... 55 2e-06 UniRef50_C9RMC2 Dihydrouridine synthase DuS n=1 Tax=Fibrobacter ... 55 2e-06 UniRef50_B0KBD0 NADH:flavin oxidoreductase/NADH oxidase n=11 Tax... 55 2e-06 UniRef50_C6IIM3 Dihydrouridine synthase n=15 Tax=Bacteroides Rep... 55 2e-06 UniRef50_O19904 Uncharacterized protein ycf23 n=1 Tax=Cyanidium ... 55 2e-06 UniRef50_D1BSN0 Lactate 2-monooxygenase n=1 Tax=Xylanimonas cell... 55 2e-06 UniRef50_A6BK55 Putative uncharacterized protein n=1 Tax=Dorea l... 55 2e-06 UniRef50_C3WVD6 NADH oxidase n=2 Tax=Fusobacterium RepID=C3WVD6_... 55 2e-06 UniRef50_C7GEK5 NADH:flavin oxidoreductase, Old Yellow Enzyme fa... 55 2e-06 UniRef50_Q9HJH3 Geranylgeranylglyceryl phosphate synthase n=4 Ta... 55 2e-06 UniRef50_A3DN81 Geranylgeranylglyceryl phosphate synthase n=1 Ta... 55 2e-06 UniRef50_B1LZS6 Histidine biosynthesis protein n=10 Tax=Alphapro... 55 2e-06 UniRef50_B5WIG7 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 55 2e-06 UniRef50_A5DSY8 Anthranilate synthase component II n=1 Tax=Lodde... 55 2e-06 UniRef50_D1B5N0 Dihydroorotate dehydrogenase family protein n=1 ... 55 3e-06 UniRef50_A6P2M8 Putative uncharacterized protein n=1 Tax=Bactero... 55 3e-06 UniRef50_A4E892 Putative uncharacterized protein n=4 Tax=Collins... 55 3e-06 UniRef50_Q5GMK6 Tryptophan synthase alpha chain n=2 Tax=Bacteria... 55 3e-06 UniRef50_C4KIS5 Geranylgeranylglyceryl phosphate synthase n=13 T... 55 3e-06 UniRef50_C3IVV3 2-nitropropane dioxygenase NPD n=4 Tax=Bacillale... 55 3e-06 UniRef50_B8FBI2 2-nitropropane dioxygenase NPD n=2 Tax=Desulfoba... 55 3e-06 UniRef50_C2D6B3 Dihydroorotate oxidase n=1 Tax=Atopobium vaginae... 55 3e-06 UniRef50_A0B8J3 Geranylgeranylglyceryl phosphate synthase n=13 T... 55 3e-06 UniRef50_A4VL89 Morphinone reductase n=2 Tax=cellular organisms ... 55 3e-06 UniRef50_C5EVU6 NADH:flavin oxidoreductase n=1 Tax=Clostridiales... 55 3e-06 UniRef50_UPI00019056C2 tRNA-dihydrouridine synthase A n=1 Tax=Rh... 55 3e-06 UniRef50_Q163H4 L-lactate dehydrogenase, putative n=19 Tax=Rhodo... 55 3e-06 UniRef50_A4E8R9 Putative uncharacterized protein n=1 Tax=Collins... 55 3e-06 UniRef50_B1ATU6 Dihydrouridine synthase 1-like (S. cerevisiae) (... 54 3e-06 UniRef50_B0VIM3 Dihydroorotate dehydrogenase, catalytic subunit ... 54 3e-06 UniRef50_A7NSB8 Dihydroorotate dehydrogenase n=2 Tax=Roseiflexus... 54 4e-06 UniRef50_A5GPV9 TRNA-dihydrouridine synthase A n=25 Tax=cellular... 54 4e-06 UniRef50_B0EBU6 tRNA-dihydrouridine synthase, putative n=4 Tax=E... 54 4e-06 UniRef50_A5IK84 Dihydroorotate dehydrogenase n=10 Tax=Thermotoga... 54 4e-06 UniRef50_UPI0001C3656A NADH:flavin oxidoreductase n=1 Tax=Clostr... 54 4e-06 UniRef50_B4YSU0 BaiCD n=2 Tax=Clostridium hylemonae RepID=B4YSU0... 54 4e-06 UniRef50_Q1PZY3 Similar to NADH oxidase n=1 Tax=Candidatus Kuene... 54 4e-06 UniRef50_C3RNU9 NADH:flavin oxidoreductase n=2 Tax=Bacteria RepI... 54 4e-06 UniRef50_A4A9J1 2-nitropropane dioxygenase, NPD n=1 Tax=Congregi... 54 4e-06 UniRef50_Q2LPX5 Indole-3-glycerol phosphate synthase n=1 Tax=Syn... 54 4e-06 UniRef50_D1VVG5 Putative enoyl-(Acyl-carrier-protein) reductase ... 54 4e-06 UniRef50_Q2SS69 Putative N-acetylmannosamine-6-phosphate 2-epime... 54 4e-06 UniRef50_B9Y4T3 Putative uncharacterized protein n=1 Tax=Holdema... 54 4e-06 UniRef50_A8ZZT0 2-nitropropane dioxygenase NPD n=2 Tax=Desulfoba... 54 4e-06 UniRef50_A3JUQ7 FMN-dependent alpha-hydroxy acid dehydrogenase f... 54 4e-06 UniRef50_A4YQH6 NADPH dehydrogenase n=5 Tax=Bacteria RepID=A4YQH... 54 5e-06 UniRef50_A8TGW8 Histidine biosynthesis protein n=1 Tax=Methanoco... 54 5e-06 UniRef50_A9KRF8 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=... 54 5e-06 UniRef50_P95040 Putative L-lactate dehydrogenase [cytochrome] 1 ... 54 5e-06 UniRef50_C2BGB2 NADH:flavin oxidoreductase n=1 Tax=Anaerococcus ... 54 5e-06 UniRef50_B5RQ77 Histidine phosphokinase/phophatase, putative n=4... 54 5e-06 UniRef50_C1E9S0 Predicted protein n=2 Tax=cellular organisms Rep... 54 5e-06 UniRef50_A0N0V5 Putative NADH-dependent flavin oxidoreductase n=... 54 5e-06 UniRef50_B0GA01 Putative uncharacterized protein n=2 Tax=Clostri... 54 5e-06 UniRef50_O29991 NADH-dependent flavin oxidoreductase n=1 Tax=Arc... 54 5e-06 UniRef50_C3Z7Q2 Putative uncharacterized protein (Fragment) n=1 ... 54 5e-06 UniRef50_B6KJZ7 Inosine-5'-monophosphate dehydrogenase n=4 Tax=A... 54 5e-06 UniRef50_B1MZ90 tRNA-dihydrouridine synthase n=39 Tax=Bacteria R... 54 6e-06 UniRef50_C2CLX0 Possible 2-nitropropane dioxygenase n=7 Tax=Cory... 54 6e-06 UniRef50_Q3AC05 Dihydroorotate dehydrogenase n=1 Tax=Carboxydoth... 54 6e-06 UniRef50_UPI0001BCA063 tRNA-dihydrouridine synthase A n=1 Tax=Ps... 54 6e-06 UniRef50_Q6BVL8 DEHA2C01584p n=4 Tax=Dikarya RepID=Q6BVL8_DEBHA 54 6e-06 UniRef50_B8FD92 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 54 6e-06 UniRef50_Q0B324 Dihydroorotate oxidase B, catalytic subunit n=8 ... 54 6e-06 UniRef50_C7IRP5 NADH:flavin oxidoreductase/NADH oxidase n=3 Tax=... 54 6e-06 UniRef50_B7XK29 NIFR3-like protein n=1 Tax=Enterocytozoon bieneu... 54 6e-06 UniRef50_B2V726 Dihydroorotate dehydrogenase n=2 Tax=Aquificales... 54 6e-06 UniRef50_B9Y366 Putative uncharacterized protein n=1 Tax=Holdema... 54 6e-06 UniRef50_B1MZ73 Dihydroorotate dehydrogenase B, catalytic subuni... 54 6e-06 UniRef50_C6A1L2 Dihydroorotate dehydrogenase family protein n=1 ... 54 7e-06 UniRef50_B8DD13 Putative N-acetylmannosamine-6-phosphate 2-epime... 54 7e-06 UniRef50_B6FRG7 Putative uncharacterized protein (Fragment) n=2 ... 54 7e-06 UniRef50_B5GVV9 Isopentenyl-diphosphate delta-isomerase II n=2 T... 54 7e-06 UniRef50_B0TGQ8 Dihydroorotate dehydrogenase n=32 Tax=Bacteria R... 54 7e-06 UniRef50_B8KYN1 NADH oxidase n=1 Tax=gamma proteobacterium NOR51... 54 7e-06 UniRef50_B2V534 Dihydrouridine synthase family protein n=29 Tax=... 54 7e-06 UniRef50_Q4PNH8 Putative L-lactate dehydrogenase n=1 Tax=uncultu... 54 7e-06 UniRef50_C4V1R4 N-acylglucosamine-6-phosphate 2-epimerase n=4 Ta... 54 7e-06 UniRef50_Q11DV8 FMN-dependent alpha-hydroxy acid dehydrogenase n... 54 7e-06 UniRef50_C1IAI2 NADH:flavin oxidoreductase/NADH oxidase n=2 Tax=... 53 7e-06 UniRef50_A3JQL6 2-nitropropane dioxygenase, NPD n=3 Tax=Proteoba... 53 7e-06 UniRef50_A9BH24 Putative N-acetylmannosamine-6-phosphate epimera... 53 8e-06 UniRef50_Q4N9T6 TRNA-dihydrouridine synthase A, putative n=2 Tax... 53 8e-06 UniRef50_A3U098 Putative uncharacterized protein n=1 Tax=Oceanic... 53 8e-06 UniRef50_D1ANR5 N-acylglucosamine-6-phosphate 2-epimerase n=8 Ta... 53 9e-06 UniRef50_A1V8W6 Oxidoreductase, FAD/FMN-binding n=49 Tax=Bacteri... 53 9e-06 UniRef50_B0NDA0 Putative uncharacterized protein n=1 Tax=Clostri... 53 9e-06 UniRef50_A5ULU9 tRNA-dihydrouridine synthase n=2 Tax=Methanobrev... 53 1e-05 UniRef50_C0D995 Putative uncharacterized protein (Fragment) n=1 ... 53 1e-05 UniRef50_B9Y2X6 Putative uncharacterized protein n=1 Tax=Holdema... 53 1e-05 UniRef50_Q6SH52 Oxidoreductase, FAD/FMN-binding n=2 Tax=Bacteria... 53 1e-05 UniRef50_UPI0001C41E29 NADH:flavin oxidoreductase/NADH oxidase f... 53 1e-05 UniRef50_Q1IKU8 2-nitropropane dioxygenase, NPD n=1 Tax=Candidat... 53 1e-05 UniRef50_A8VQT3 Transposase IS3/IS911 family protein n=1 Tax=Bac... 53 1e-05 UniRef50_A5G9T5 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=... 53 1e-05 UniRef50_Q6MM64 Inosine-5-monophosphate dehydrogenase n=1 Tax=Bd... 53 1e-05 UniRef50_B8HZW6 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=... 53 1e-05 UniRef50_A4FCY6 Isopentenyl-diphosphate delta-isomerase II 2 n=6... 53 1e-05 UniRef50_B9Y3X7 Putative uncharacterized protein n=2 Tax=Holdema... 53 1e-05 UniRef50_Q47C62 Dihydroorotate dehydrogenase n=3 Tax=Proteobacte... 53 1e-05 Sequences not found previously or not previously below threshold: UniRef50_D2RNR4 Indole-3-glycerol-phosphate synthase n=5 Tax=cel... 79 2e-13 UniRef50_C0WBV3 Putative uncharacterized protein n=1 Tax=Acidami... 79 2e-13 UniRef50_C2KPT6 Indole-3-glycerol-phosphate synthase n=3 Tax=Mob... 72 2e-11 UniRef50_C8W336 Indole-3-glycerol-phosphate synthase n=1 Tax=Des... 72 2e-11 UniRef50_A9KE93 Indole-3-glycerol phosphate synthase n=4 Tax=Cox... 70 1e-10 UniRef50_C1QEF4 Indole-3-glycerol phosphate synthase n=1 Tax=Bra... 69 1e-10 UniRef50_C4KZ66 Indole-3-glycerol phosphate synthase n=1 Tax=Exi... 69 1e-10 UniRef50_B1ZW79 Indole-3-glycerol phosphate synthase n=2 Tax=Ver... 68 3e-10 UniRef50_C2D6F0 Indole-3-glycerol-phosphate synthase n=1 Tax=Ato... 67 5e-10 UniRef50_Q0B005 Indole-3-glycerol phosphate synthase n=1 Tax=Syn... 67 6e-10 UniRef50_P00937 Indole-3-glycerol phosphate synthase n=12 Tax=Di... 67 6e-10 UniRef50_C4IG30 Indole-3-glycerol phosphate synthase n=2 Tax=Clo... 66 1e-09 UniRef50_P25170 N-(5'-phosphoribosyl)anthranilate isomerase n=11... 65 2e-09 UniRef50_D1RLX1 Indole-3-glycerol phosphate synthase n=1 Tax=Leg... 65 3e-09 UniRef50_A3ESF1 Indole-3-glycerol phosphate synthase n=3 Tax=Lep... 64 6e-09 UniRef50_C6DGZ6 Indole-3-glycerol-phosphate synthase., Phosphori... 64 6e-09 UniRef50_A4XLM6 Indole-3-glycerol phosphate synthase n=2 Tax=Clo... 62 2e-08 UniRef50_A6TM74 Indole-3-glycerol phosphate synthase n=6 Tax=Clo... 62 2e-08 UniRef50_B6JXZ5 Anthranilate synthase component 2 n=1 Tax=Schizo... 60 7e-08 UniRef50_B7KHK1 Indole-3-glycerol-phosphate synthase n=5 Tax=Cya... 60 8e-08 UniRef50_Q88WI2 Indole-3-glycerol phosphate synthase n=3 Tax=Lac... 59 1e-07 UniRef50_Q1VYS9 Indole-3-glycerol phosphate synthase n=1 Tax=Psy... 58 4e-07 UniRef50_B3DYN8 Indole-3-glycerol phosphate synthase n=1 Tax=Met... 55 2e-06 UniRef50_Q98NG5 Oxidoreductase n=4 Tax=Proteobacteria RepID=Q98N... 55 2e-06 UniRef50_C8WKN8 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=... 54 4e-06 UniRef50_C4GCT1 Putative uncharacterized protein n=1 Tax=Shuttle... 54 4e-06 UniRef50_C4WAT2 Indole-3-glycerol phosphate synthase n=2 Tax=Sta... 54 5e-06 UniRef50_P26938 Indole-3-glycerol phosphate synthase n=4 Tax=Pro... 53 8e-06 >UniRef50_B0TDM7 Imidazole glycerol phosphate synthase subunit hisF n=157 Tax=root RepID=HIS6_HELMI Length = 261 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 121/257 (47%), Positives = 159/257 (61%), Gaps = 1/257 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV G+VVKG F N GD V LA Y +EGADE+VF DITASSDGR Sbjct: 1 MLAKRIIPCLDVHGGRVVKGTNFVNLRDAGDPVELAAVYDKEGADEVVFLDITASSDGRA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R AE + IPF V GG++S+ED ++L GADKIS+N+ A+ P LI+ A +F Sbjct: 61 IMLDVVRRTAEEVFIPFTVGGGLRSVEDIREMLKAGADKISLNTSAVQTPKLISDGAWKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVN-QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 G QCIVV ID + V + T + L+W + V++ GAGEI+L M Sbjct: 121 GSQCIVVAIDARRRRDAEGNPVEGWEVYTHGGRKPTGIDVLEWARRVEELGAGEILLTSM 180 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG ++GYD+ + V E +P+IASGG G ++H +E D ALAAS+FH + Sbjct: 181 DKDGTKDGYDIPLTRAVSEAVTIPVIASGGVGNLDHIVEGLTVGKADAALAASIFHYREY 240 Query: 240 NIGELKAYLATQGVEIR 256 IGE K YL +GV +R Sbjct: 241 TIGETKEYLRERGVHVR 257 Score = 50.1 bits (118), Expect = 7e-05, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 1/109 (0%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 D++ A+R E GA E++ + D V+E + IP +GG Sbjct: 151 GGRKPTGIDVLEWARRVEELGAGEILLTSMDKDGTKDGYDIPLTRAVSEAVTIPVIASGG 210 Query: 83 IKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + +L+ + L+ G AD S I + + + V Sbjct: 211 VGNLDHIVEGLTVGKADAALAASIFHYREYTIGETKEYLRERGVHVRQW 259 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 1/88 (1%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA E+V + L+ +++ E +P GG ++E E + A D Sbjct: 43 GADEVVFLDITASSDGRAIMLDVVRRTAEEVFIPFTVGGGLRSVEDIREMLK-AGADKIS 101 Query: 230 AASVFHKQIINIGELKAYLATQGVEIRI 257 + + I + +Q + + I Sbjct: 102 LNTSAVQTPKLISDGAWKFGSQCIVVAI 129 >UniRef50_Q12UY6 Imidazole glycerol phosphate synthase subunit hisF n=354 Tax=cellular organisms RepID=HIS6_METBU Length = 273 Score = 182 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 110/273 (40%), Positives = 152/273 (55%), Gaps = 16/273 (5%) Query: 1 MLAKRIIPCLDV----RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS 56 ML KRIIPCLDV G VVKGV+F + + GD V LAKRY E+GADELVF DITAS Sbjct: 1 MLTKRIIPCLDVTLDASGGTVVKGVEFVDLKKAGDPVDLAKRYNEQGADELVFLDITASH 60 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +GR + R A + IP V GGI S+ED +IL GADK+S+N+ A+ +P I Sbjct: 61 EGRSTMIDVIERTANEVFIPLTVGGGINSVEDVRQILRAGADKVSVNTAAVKNPEFIREA 120 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHV------------NQYTGDESRTRVTQWETLDWVQ 164 ++ FG QCIV ID + + T +T+ W + Sbjct: 121 SNIFGSQCIVTAIDCKRNLDVENNQDKTILELEDGTLAWYEVVIYGGREPTGLDTVQWAK 180 Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 +V++ G+GEI+L MN+DG +G+D+ KK+ E +P+IASGG G EH + F D Sbjct: 181 KVEELGSGEILLTSMNRDGTYDGFDIPITKKLSEELDIPIIASGGVGNPEHMYKGFVDGK 240 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D LAAS+FH + ++K L + + +R+ Sbjct: 241 ADAGLAASIFHFGEYTVRDVKEALRAKNIPVRL 273 >UniRef50_B2V9M8 Imidazole glycerol phosphate synthase subunit hisF n=10 Tax=Bacteria RepID=HIS6_SULSY Length = 252 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 121/257 (47%), Positives = 159/257 (61%), Gaps = 5/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV G+VVKGV F N GD V +A Y +EGADELVF DITASS+ R Sbjct: 1 MLAKRIIPCLDVDKGRVVKGVNFVNLIDAGDPVEIASVYDKEGADELVFLDITASSEDRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V + AE + +P V GG++SLED K+L GADK+SIN+ A+ +P+L+ A RF Sbjct: 61 IILDVVKKTAETVFMPLTVGGGVRSLEDIRKLLENGADKVSINTAAVKNPSLVENAAIRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IVV ID E T + ++W + V+ GAGEI+L M+ Sbjct: 121 GSSTIVVAIDAKKVGENKWEVYIH-----GGRTPTGIDAIEWAKAVESLGAGEILLTSMD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG ++GYD+E K V E +P+IASGGAG ++HF EAF D LAAS+FH + I Sbjct: 176 KDGTKSGYDIELTKAVSEAVKIPVIASGGAGNVQHFYEAFEYGKADACLAASLFHFKEIE 235 Query: 241 IGELKAYLATQGVEIRI 257 I ELK YL +G+ +R+ Sbjct: 236 ISELKNYLKNKGINVRL 252 >UniRef50_C9KKW6 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKW6_9FIRM Length = 252 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 112/256 (43%), Positives = 152/256 (59%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M KRIIPCLDV+DG+VVKG F GD V LA RY EE ADELVF DITASSD R Sbjct: 1 MYTKRIIPCLDVKDGRVVKGTNFVGLRDAGDPVELAARYDEERADELVFLDITASSDNRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + A + IPF V GGI+++ED ++L GADK S+N+ A+ +P L+ A++F Sbjct: 61 TMVNVARDCASKVFIPFTVGGGIRTVEDMRRMLKAGADKTSLNTAAVKNPGLLKEGAEKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+ +D T + L+WV++ GAGEI+L M+ Sbjct: 121 GRQCMVLAVDARRAGNHRWE-----VYVNGGRTPTGLDCLEWVKKAVALGAGEILLTSMD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG ++GYD+E + V + +VP+IASGGAG +EHF + D LAASVFH Sbjct: 176 ADGTKDGYDIELTRAVSDAVNVPVIASGGAGKLEHFYDVLTLGHADAVLAASVFHYGQFT 235 Query: 241 IGELKAYLATQGVEIR 256 + ++K YL ++GVE+R Sbjct: 236 VRQVKEYLQSRGVEVR 251 >UniRef50_C7P985 Imidazole glycerol phosphate synthase subunit hisF n=5 Tax=cellular organisms RepID=C7P985_METFA Length = 272 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 114/272 (41%), Positives = 159/272 (58%), Gaps = 14/272 (5%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KRIIPCLD++DG+VVKG +F N GD V LA+ Y +EGADELVF DITAS++ R Sbjct: 1 MLTKRIIPCLDIKDGRVVKGTKFLNLRDAGDPVELAQLYDDEGADELVFLDITASAEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R AE + IP V GGIKS+ED KIL GADKISIN+ A+ +P LI ++ F Sbjct: 61 IIIDVVERTAEKVFIPLTVGGGIKSIEDFRKILRAGADKISINTAAVKNPNLIKEASEIF 120 Query: 121 GVQCIVVGIDTWYDAETGKY--------------HVNQYTGDESRTRVTQWETLDWVQEV 166 G QC+VV ID + + T + ++W ++V Sbjct: 121 GSQCVVVAIDAKRHYINEDEIDKIDKNVVKVEDGYCWFEVYIYGGRKETGIDAIEWAKKV 180 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 ++ GAGEI+L +++DG ++GYDL +++ + +P+IASGG G EH EAF D Sbjct: 181 EELGAGEILLTSIDKDGTKSGYDLILTREISKSVKLPVIASGGCGKPEHVYEAFVHGKAD 240 Query: 227 GALAASVFHKQIINIGELKAYLATQGVEIRIC 258 AL A + H + I E+K Y A +G+ +R+ Sbjct: 241 AALMAGILHYKEYTIEEIKKYCADRGIPMRLL 272 >UniRef50_C4L176 Imidazole glycerol phosphate synthase subunit hisF n=28 Tax=Bacteria RepID=HIS6_EXISA Length = 255 Score = 176 bits (446), Expect = 7e-43, Method: Composition-based stats. Identities = 116/258 (44%), Positives = 159/258 (61%), Gaps = 8/258 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML +RIIPCLDV++G+VVKG++F IGD V +AK Y E GADELVF DITAS++ R Sbjct: 1 MLKRRIIPCLDVKEGRVVKGIEFVQLRDIGDPVEIAKYYDESGADELVFLDITASTERRQ 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 VS VA + IP V GGI+SLED + +L GADK+S+N+ A+ P+LI ADRF Sbjct: 61 TMLDVVSAVARKVFIPLTVGGGIRSLEDISSLLKAGADKVSLNTLAVESPSLIREAADRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIVV ID + + + T ++W ++V GAGE+++ MN Sbjct: 121 GSQCIVVAIDVKFKDGEYYVYTY------GGKQKTDLLAVEWAKQVAALGAGELLVTSMN 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 QDG ++GYDL L+++REV +P+IASGGAG EH +EA VD AL AS+ H + Sbjct: 175 QDGKQSGYDLSILEQLREVVDIPIIASGGAGNAEHVVEALEK--VDAALLASILHDRKTT 232 Query: 241 IGELKAYLATQGVEIRIC 258 + E+K + + +R Sbjct: 233 VEEVKHVCKSHNLPMRFV 250 >UniRef50_A6UUZ9 Imidazole glycerol phosphate synthase subunit hisF n=27 Tax=cellular organisms RepID=HIS6_META3 Length = 275 Score = 172 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 18/275 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KRIIPCLD+++G+VVKG F GD V L+K Y E+GADELVF DI AS + R Sbjct: 1 MLTKRIIPCLDIKNGRVVKGTNFVELRDAGDPVELSKIYNEQGADELVFLDIGASHEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + A+ + IP V GGI++ +D +IL GADKIS+N+ A+ +P LI + ++ + Sbjct: 61 IIEHLVEKTADQVFIPLTVGGGIRTTDDFRRILRAGADKISVNTAAIHNPDLIKQSSELY 120 Query: 121 GVQCIVVGIDTWYDAET------------------GKYHVNQYTGDESRTRVTQWETLDW 162 G QC+VV ID+ + + T + ++W Sbjct: 121 GAQCVVVAIDSKRHYVNEEDLDSKQLEDKNVVKVDKNKYCWFEVFIYGGRKETGIDAIEW 180 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 + ++ GAGEI+L M+ DG ++GYD+E K + +P+IASGG G +H + F Sbjct: 181 AKTAEELGAGEILLTSMDADGTKDGYDIELTKSISTHIKLPVIASGGCGAPQHIHQVFEY 240 Query: 223 ADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D AL AS+ H + +GELK Y + + +R+ Sbjct: 241 GKADAALMASILHYREYTVGELKKYCMDKNIPMRL 275 >UniRef50_B8FFL4 Imidazole glycerol phosphate synthase subunit hisF n=19 Tax=cellular organisms RepID=HIS6_DESAA Length = 260 Score = 171 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 111/256 (43%), Positives = 157/256 (61%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML+KR+I CLDVRDG+ KG++F+ + IGD V +A+ Y E G DELVFYDITAS + R Sbjct: 1 MLSKRVIVCLDVRDGKTTKGIKFKGNVDIGDPVDMARVYYEAGCDELVFYDITASHEKRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V RVAE I IPF V GGI S+ED +L GA+KIS+NS A+ +P +IT+ A+ F Sbjct: 61 IMIDVVRRVAETIFIPFSVGGGISSVEDMRDVLLAGAEKISVNSAAVKNPKIITQGAEAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+G+D ++ K + L W QE ++ GAGEI LN ++ Sbjct: 121 GNQCVVLGMDVKKVEKSEKIPSGYEIVINGGRTYMGIDALWWAQEGERLGAGEICLNSID 180 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG + GY+LE + E ++P+IASGG G +H + ++ D AL AS+ H Sbjct: 181 ADGTKEGYELELTALISENVNIPVIASGGGGIPQHLGDVLKEGKADAALIASMVHYGTYT 240 Query: 241 IGELKAYLATQGVEIR 256 I E+K +L +QG+ +R Sbjct: 241 IPEIKDHLKSQGISVR 256 >UniRef50_B9DIP1 Imidazole glycerol phosphate synthase subunit hisF n=224 Tax=Bacteria RepID=HIS6_STACT Length = 254 Score = 170 bits (430), Expect = 5e-41, Method: Composition-based stats. Identities = 106/256 (41%), Positives = 160/256 (62%), Gaps = 4/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M+ KRIIPCLDV+DG+VVKGVQF+ IGD V LA Y E ADELVF DI+ + +G Sbjct: 1 MIKKRIIPCLDVKDGRVVKGVQFKGLRDIGDPVALAAYYNAELADELVFLDISRTENGHQ 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + A + IP + GGI S +D + +L GADK+S+NS AL +P+L+ +++F Sbjct: 61 MMLDIIEETASKLFIPLTIGGGISSTDDISTLLKHGADKVSLNSSALRNPSLVKEASEKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI + +D ++ E + + + T LDWV++V+ GAGE+++ M+ Sbjct: 121 GSQCICIAVDAKWEDERN----DWFCYTHGGKQPTDIRVLDWVRQVEYLGAGELLVTSMD 176 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGV+ G+D + L ++ V +P+IASGG G +HF++ F+ +V LAAS+FH + Sbjct: 177 YDGVKQGFDHQLLNQINTVVSIPVIASGGGGNAQHFVDLFQQTNVSAGLAASIFHDKETT 236 Query: 241 IGELKAYLATQGVEIR 256 IG +K YL +GV++R Sbjct: 237 IGAVKTYLKDKGVDVR 252 >UniRef50_Q18JI3 Imidazole glycerol phosphate synthase subunit hisF n=36 Tax=cellular organisms RepID=HIS6_HALWD Length = 270 Score = 167 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 109/269 (40%), Positives = 144/269 (53%), Gaps = 13/269 (4%) Query: 1 MLAKRIIPCLDVR-----DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS 55 ML KRIIPC+DV + V G+ F + E GD V +AK+Y GADE VF DITAS Sbjct: 1 MLTKRIIPCIDVDLDEDGNPAVYTGINFEDLEYTGDPVEMAKQYNMAGADEFVFLDITAS 60 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + GR VSRVA+ I IP V GGI++ +D L GADK+SIN+ AL P LIT Sbjct: 61 AVGRETMLETVSRVADEIFIPLTVGGGIRTRDDIKSTLRAGADKVSINTAALETPELITT 120 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYH--------VNQYTGDESRTRVTQWETLDWVQEVQ 167 A FG QCIV+ +D + + + T + L+WV E + Sbjct: 121 GASAFGSQCIVISVDARRRFDEQGENYLSVDGESCWFECTVKGGREGTGIDVLEWVTEAE 180 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 RGAGE+ +N ++ DG ++GYD+ V + P+IAS G G+ E F +A D Sbjct: 181 TRGAGELFINSIDADGTQDGYDIPLTSAVCDAVSTPVIASSGCGSPADMHEVFTEAGADA 240 Query: 228 ALAASVFHKQIINIGELKAYLATQGVEIR 256 LAAS+FH +I K YL +GV IR Sbjct: 241 GLAASIFHFGEYSIEATKEYLDERGVPIR 269 Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 1/96 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 ++ GA E V + V LE + +V + +PL GG T + R Sbjct: 40 MAKQYNMAGADEFVFLDITASAVGRETMLETVSRVADEIFIPLTVGGGIRTRDDIKSTLR 99 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 A D + + I + +Q + I + Sbjct: 100 -AGADKVSINTAALETPELITTGASAFGSQCIVISV 134 >UniRef50_B1I557 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Bacteria RepID=HIS4_DESAP Length = 262 Score = 166 bits (420), Expect = 8e-40, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 16/257 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+R G+ V+ Q R + D V +A+ + E+GA L D+ + G+ Sbjct: 1 MLIIPAVDLRGGRCVRLFQGRADQETVYSTDPVAVARTWEEQGARRLHVVDLDGAFTGKP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V + + ++IP V GGI++ E+ L G D++ + + AL +P + + + Sbjct: 61 QNSGVVLDIVKSVNIPVQVGGGIRNPENVKCYLEHGVDRVILGTAALTNPEFLDAVVAAY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + +V + + + L +++E+ +RG +V + Sbjct: 121 GERIVVGVDCRDGRVCV-----------QGWEQTAATDVLPFLEELVRRGVRRVVFTDVK 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG G +LE++ +V + +IASGG +E VD + + Sbjct: 170 RDGTLEGPNLEEIARVAAHTELKVIASGGVSRLEDLRALKKLEHLGVDSVIIGKALYAGT 229 Query: 239 INIGELKAYLATQGVEI 255 I + E A + + Sbjct: 230 ITLAEALALERKEKDNV 246 >UniRef50_C0Z6P5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Bacillales RepID=HIS4_BREBN Length = 249 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 100/256 (39%), Gaps = 16/256 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ + P +D+R G+ V+ Q + + +AKR+ E+GA + D+ + +G Sbjct: 1 MSFIVYPAIDIRGGKCVRLFQGDYGQETVYADSPLAMAKRWVEQGASWVHLVDLDGAKEG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + + + +A I +P V GGI++ E A L G ++ + + A+ D R+ Sbjct: 61 KPANAAIIKEIARSIPVPVQVGGGIRTEEQIADYLEAGVARVIVGTAAIEDEPFTKRILQ 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 G + + T T + + + + GA + Sbjct: 121 NDGDKIAIGLDCRNGLVAT-----------RGWLTTTDVQATELAKRLVTYGAETFIYTD 169 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHK 236 + +DG G ++E++ + +IASGG ++ L A V GA+ + Sbjct: 170 IARDGTMTGPNVEEIAALAMATGKSVIASGGVSQLDDLLTLATHASDGVSGAIVGKALYT 229 Query: 237 QIINIGELKAYLATQG 252 + E + + Sbjct: 230 DAFTLEEALQRMEGRE 245 >UniRef50_D2RTG3 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=6 Tax=Euryarchaeota RepID=D2RTG3_9EURY Length = 244 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 119/249 (47%), Gaps = 14/249 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN--HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++IP +D++DG+VV+ VQ + GD V A+R+ +EGA+ L D+ + +G+ Sbjct: 7 FQVIPAVDMQDGEVVQLVQGERGTEKTYGDPVDAARRWLDEGAEALHLVDLDGAFEGQRA 66 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + V E +D+P + GGI++ +DA +L G D++ + + A+ +P ++ +++R Sbjct: 67 NGDAIDEVLETVDVPTQLGGGIRTADDAVDLLERGVDRVILGTAAVENPDIVAEISERHP 126 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 +V + E T +D + + GA I+ ++ Sbjct: 127 DSVVVSL-----------DAKDGEVVVEGWTEGAGISPVDAAERYAELGAAAILFTNVDV 175 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +G G E ++++ E VP+IASGG T+E A DA + S ++ + Sbjct: 176 EGKLEGVAAEPVRELVEATDVPVIASGGVATLEDV-RALEDAGAAAVVVGSALYEGKFTL 234 Query: 242 GELKAYLAT 250 E ++ + + Sbjct: 235 AEAQSAIDS 243 >UniRef50_Q1PWX6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWX6_9BACT Length = 243 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++ G+ V+ Q + E D V +AK + ++GA L D+ + DG Sbjct: 1 MIIFPAIDLKGGKCVRLTQGKKDEETVFSDDPVDMAKSWEDQGAQYLHVVDLDGAFDGLP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + S V ++ I+IP GG+++ E +L G +++ I + AL P+ + L F Sbjct: 61 KNLSIVEQIVNNINIPIEFGGGLRTTESVKSVLDLGVERVIIGTKALDSPSWVEELCSLF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + G N T +++ +D+ +E++K I+ ++ Sbjct: 121 PGRV-----------AVGIDAKNGKVAVHGWTSLSEKTAIDFAREMEKFSPCAIIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++E LK++ P+IASGG +++ E V+G + + I Sbjct: 170 KDGMLQGPNIESLKELLSSIKTPVIASGGISSLKDI-EYICQLPVEGMIVGKALYTGHIK 228 Query: 241 IGELKAYLAT 250 E K + Sbjct: 229 FSEAKQLCDS 238 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 38/115 (33%), Gaps = 2/115 (1%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 +D ++G+V V + A+ + ++F DI+ + + + + Sbjct: 128 IDAKNGKV--AVHGWTSLSEKTAIDFAREMEKFSPCAIIFTDISKDGMLQGPNIESLKEL 185 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 I P +GGI SL+D I + + + + C Sbjct: 186 LSSIKTPVIASGGISSLKDIEYICQLPVEGMIVGKALYTGHIKFSEAKQLCDSIC 240 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 1/90 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + + +GA + + ++ +L ++++ ++P+ GG T E Sbjct: 35 MAKSWEDQGAQYLHVVDLDGAFDGLPKNLSIVEQIVNNINIPIEFGGGLRTTESVKSVL- 93 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQ 251 D V+ + + + EL + + Sbjct: 94 DLGVERVIIGTKALDSPSWVEELCSLFPGR 123 >UniRef50_Q8DJN7 Imidazole glycerol phosphate synthase subunit hisF n=55 Tax=cellular organisms RepID=HIS6_THEEB Length = 281 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 111/256 (43%), Positives = 149/256 (58%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRI+PCLDV+ G+VVKGV F N GD V LA+ Y GADELVF DITA+ + R Sbjct: 2 MLAKRILPCLDVKAGRVVKGVNFVNLRDAGDPVELAQAYNAAGADELVFLDITATHEERN 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R A+ + IP V GGI+SL +L GADK+S+NS A+ P L+ + +DRF Sbjct: 62 ILIDVVYRTADQVFIPLTVGGGIQSLTMIKDLLRAGADKVSLNSAAVRQPDLVNQASDRF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIVV ID + + T + + W E+ KRGAGE+++ M+ Sbjct: 122 GAQCIVVAIDARREPDCAPDQPRWQVYVRGGREATGLDAVAWAVEMAKRGAGELLVTSMD 181 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG + GYDLE + + E +P+IASGGAGT EH A + + AL AS+ H + Sbjct: 182 ADGTQAGYDLELTRAIAERVEIPVIASGGAGTCEHIRAALVEGKAEAALLASLLHYGQLT 241 Query: 241 IGELKAYLATQGVEIR 256 I ++K YL V +R Sbjct: 242 IAQIKGYLHQHQVPVR 257 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 1/88 (1%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA E+V + ++ + + + +PL GG ++ + R A D Sbjct: 44 GADELVFLDITATHEERNILIDVVYRTADQVFIPLTVGGGIQSLTMIKDLLR-AGADKVS 102 Query: 230 AASVFHKQIINIGELKAYLATQGVEIRI 257 S +Q + + Q + + I Sbjct: 103 LNSAAVRQPDLVNQASDRFGAQCIVVAI 130 >UniRef50_C7RAI6 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAI6_KANKD Length = 265 Score = 163 bits (412), Expect = 5e-39, Method: Composition-based stats. Identities = 103/257 (40%), Positives = 151/257 (58%), Gaps = 2/257 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L R+I CLDV G+VVKGV F+ + +GD V LA RY E+GADE++F DI A+ + R Sbjct: 5 LKSRVIVCLDVAHGRVVKGVNFKGLQDMGDPVELAIRYQEQGADEIIFLDIKATLEQRAN 64 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V+RVAE + IPF V GG+ + D A+ L+ GADK+++NS A+ P L+ +A FG Sbjct: 65 ALEVVTRVAENLSIPFTVGGGLNTYADVAQFLNAGADKVALNSAAVKHPDLVDEIAKGFG 124 Query: 122 VQCIVVGID-TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 QC+VV +D + + +T + W+ E+++RGAGEI+L M+ Sbjct: 125 SQCVVVAVDLNQEQDQKTQGSSEYEVYINGGHTLTDLNAMQWLTEIEQRGAGEILLTAMH 184 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G+D E + +V + + +IASGGA HF + F A D ALAA +FH+ Sbjct: 185 RDGTGFGFDNELMSQVSKKLGIQVIASGGASKPAHFTDTF-LAGSDAALAAGMFHRGEFT 243 Query: 241 IGELKAYLATQGVEIRI 257 +G++K L GV +RI Sbjct: 244 VGQVKQELLNNGVAVRI 260 >UniRef50_A5FQU7 Histidine biosynthesis protein n=5 Tax=Dehalococcoides RepID=A5FQU7_DEHSB Length = 268 Score = 162 bits (411), Expect = 8e-39, Method: Composition-based stats. Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 1/257 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M +IIPCLDV+DG+VVK ++F + D A Y+++GADEL F DITA+ + Sbjct: 1 MKPIKIIPCLDVKDGRVVKEIKFTDMADARDPAEAAFVYSKQGADELAFLDITATIENSS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + WV ++ +P GGI++L+D + + G +++N+ + I + RF Sbjct: 61 IHTDWVKKIISKTSLPLIAGGGIRNLQDIENLFTLGVSNVALNTITPQNQEFIRKAVARF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I+V ID G H T + E +DW ++V+ GAG I+L + Sbjct: 121 GSERIIVAIDGI-KNPPGNGHPRLETVMPNGDDTHNLELVDWAKQVEALGAGAILLTSKD 179 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG ++G+D+E ++ V +P+IASGGAG +E A + LAASVFH IIN Sbjct: 180 TDGTKDGFDMEMIRSVTRAVSIPVIASGGAGKLEDMYAAIIEGKAQAVLAASVFHSGIIN 239 Query: 241 IGELKAYLATQGVEIRI 257 I ELK YL ++G+ + I Sbjct: 240 ISELKTYLHSKGIPVNI 256 >UniRef50_B5YIB7 Imidazole glycerol phosphate synthase subunit hisF n=5 Tax=cellular organisms RepID=HIS6_THEYD Length = 278 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 118/278 (42%), Positives = 160/278 (57%), Gaps = 21/278 (7%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV+DG+VVKGV F N GD V A Y EE ADELVF D+TAS + R Sbjct: 1 MLAKRIIPCLDVKDGRVVKGVNFLNLRDAGDPVENALYYNEEEADELVFLDVTASHEKRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V R A V+ +P V GGIKSL+D +L+ GADK+SIN+ A+ DP I + + RF Sbjct: 61 IIIDVVERTASVVFMPLTVGGGIKSLDDIRDLLNAGADKVSINTTAVKDPYFIQKASTRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGD---------------------ESRTRVTQWET 159 G QCIV+ ID + + + Sbjct: 121 GSQCIVIAIDAKRVDKNFNPKAYPPESWFDDKELSDVLYKEDSRFVLSTHGGRLMRPIDA 180 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 + W +++++ GAGEI+L M++DG + GYD+E + + E +P+IASGGAGT+EH EA Sbjct: 181 IAWAKKMEEFGAGEILLTSMDRDGTKEGYDIELTRAISEAVSIPVIASGGAGTLEHLYEA 240 Query: 220 FRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 F A D ALAAS+FH + +I E K +L +G+ +RI Sbjct: 241 FAYAKADAALAASIFHFREYSIREAKEFLRQKGIPVRI 278 >UniRef50_Q12WC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=18 Tax=Euryarchaeota RepID=HIS4_METBU Length = 246 Score = 161 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 125/257 (48%), Gaps = 17/257 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ +IP +D++ G+ V+ VQ + D V +A + +GA L D+ + +G Sbjct: 1 MSFEVIPAVDMKGGKCVQLVQGVPGSEMISLDDPVEVALDWVSQGARTLHLIDLDGAIEG 60 Query: 59 RVVDKSWVSRVAEVID---IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + + ++ E I V GGI+S EDAA +L G DK+ +++ AL DP LI + Sbjct: 61 NRTNAPIIKKIVEKCKPQGIYIQVGGGIRSFEDAATLLDIGIDKVILSTAALKDPELIKK 120 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 L+D FG + I V + N E T+ ++ ++ + +++GAG I+ Sbjct: 121 LSDEFGSEHINVAL----------DSKNGKISIEGWTKESEHTAVEMGSQFEEKGAGSIL 170 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++ +G+ NG + + +++ +P+IASGG T+E + ++ G + S + Sbjct: 171 FTNIDSEGLLNGVNPKPTEELVNAVTIPVIASGGVTTLEDIVT-LKNTGAAGVVVGSALY 229 Query: 236 KQIINIGELKAYLATQG 252 K+ + E ++ + Sbjct: 230 KKRFTLTEAINIISDKN 246 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 4/95 (4%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRD 222 +GA + L ++ N + +KK+ E C + + GG + E D Sbjct: 41 WVSQGARTLHLIDLDGAIEGNRTNAPIIKKIVEKCKPQGIYIQVGGGIRSFEDAATLL-D 99 Query: 223 ADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 +D + ++ K I +L ++ + + + Sbjct: 100 IGIDKVILSTAALKDPELIKKLSDEFGSEHINVAL 134 >UniRef50_B3DY29 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DY29_METI4 Length = 248 Score = 160 bits (404), Expect = 5e-38, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 13/251 (5%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ +D+ GQVV+ Q + E D V A + +GAD L D+ + G Sbjct: 7 KTMKMYAAIDLFKGQVVRLRQGKLEEMTVYGSDPVKTALFWQSQGADGLHIVDLEGAFSG 66 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + ++A + IP GG++++E K L GA ++ I S + DP + L++ Sbjct: 67 TPRHLDLLEKIAYAVTIPIQFGGGLRTVEQVLKALEGGAQRVVIGSKLVTDPGFLQELSE 126 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + G + IV +DT E + + + ++++ V+++GAG ++ Sbjct: 127 KIGPEKIVAALDTQNGEIQ----------IEGWKKSSGYSLENFIKWVEQKGAGFLLYTN 176 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + DG G D+ +KV E+ +P+ ASGG G + E + + GA+ ++ Sbjct: 177 IQTDGTLKGADVRGTQKVVEMSRLPVFASGGIGCTKDVEELLKLKGLYGAILGRSLYEGK 236 Query: 239 INIGELKAYLA 249 I++ E+K Sbjct: 237 ISLSEIKKNFK 247 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 1/93 (1%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 Q +GA + + + L+ L+K+ +P+ GG T+E L+A Sbjct: 46 FWQSQGADGLHIVDLEGAFSGTPRHLDLLEKIAYAVTIPIQFGGGLRTVEQVLKALE-GG 104 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + S + EL + + + + Sbjct: 105 AQRVVIGSKLVTDPGFLQELSEKIGPEKIVAAL 137 >UniRef50_A0AG16 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Bacteria RepID=HIS4_LISW6 Length = 240 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D+++GQ V+ Q + + D + AK +A GA L D+ + +GR Sbjct: 1 MQIFPAIDLKNGQCVRLFQGDFSKKMIVNEDPIAQAKAFATGGATYLHIVDLDGALEGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + ++ E +P V GGI+SL L G D++ I S AL +P + ++ Sbjct: 61 VNLEIIQKMKEAATVPVQVGGGIRSLAQVDYYLDSGIDRVIIGSAALTNPDFLHAAVQKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + G N Y V+Q LD ++++K G I+ ++ Sbjct: 121 GPKI-----------AVGIDAKNGYVATSGWLEVSQVNYLDLAKQMEKVGVETIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G +LEQ+ +++ ++ LIASGG + EA + GA+A + I+ Sbjct: 170 RDGTLTGPNLEQMAALQKHVNIHLIASGGVSSRADL-EALSQLGLYGAIAGKALYNGHIS 228 Query: 241 IGELKA 246 + ++ Sbjct: 229 MSDVTE 234 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 30/82 (36%), Gaps = 1/82 (1%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA + + ++ +LE ++K++E VP+ GG ++ D+ +D + Sbjct: 43 GATYLHIVDLDGALEGRPVNLEIIQKMKEAATVPVQVGGGIRSLAQVDYYL-DSGIDRVI 101 Query: 230 AASVFHKQIINIGELKAYLATQ 251 S + + Sbjct: 102 IGSAALTNPDFLHAAVQKYGPK 123 >UniRef50_A2C5V2 Imidazoleglycerol-phosphate synthase n=2 Tax=Prochlorococcus marinus RepID=A2C5V2_PROM3 Length = 500 Score = 157 bits (398), Expect = 3e-37, Method: Composition-based stats. Identities = 88/255 (34%), Positives = 139/255 (54%), Gaps = 5/255 (1%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L+KRII LDV+ +++KGV+F +IGD + +A++YA+ G DEL++ D AS GR Sbjct: 15 LSKRIIARLDVKGNKIIKGVRFEGLRVIGDPLDMARKYAKAGIDELLYIDAVASLYGRNS 74 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + + IP GGI++LEDA +LS GADKI+IN+ AL P LI+ L++ G Sbjct: 75 LIEVLKSTSSEVFIPITAGGGIRNLEDAKLLLSNGADKIAINTAALECPQLISELSNTLG 134 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QC+VV I + + ES + + + W++ VQ GAGEI+L ++Q Sbjct: 135 SQCVVVSIQARASSSSSWDA-----MKESGREKSGIDVIKWIENVQLLGAGEILLTSVDQ 189 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG D ++KV + +PLI SGG +A ++ + + H Q N+ Sbjct: 190 DGTCIKPDEILIQKVLPILKLPLIVSGGFSDPNQVYQALTNSRISAVAIGAALHYQKTNV 249 Query: 242 GELKAYLATQGVEIR 256 ++K+ L+ + IR Sbjct: 250 SDIKSMLSFNNIAIR 264 Score = 55.9 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 1/96 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 ++ K G E++ +E LK +P+ A GG +E + Sbjct: 48 MARKYAKAGIDELLYIDAVASLYGRNSLIEVLKSTSSEVFIPITAGGGIRNLEDA-KLLL 106 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D + + I EL L +Q V + I Sbjct: 107 SNGADKIAINTAALECPQLISELSNTLGSQCVVVSI 142 >UniRef50_A8M910 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M910_CALMQ Length = 254 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 112/256 (43%), Positives = 154/256 (60%), Gaps = 8/256 (3%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L +RIIPC+DV VVKGV F ++GD V LA RY EEGADEL DITA+ GR Sbjct: 7 LVRRIIPCMDVDADIVVKGVNFEGLRVMGDPVELASRYEEEGADELFLLDITATVQGRST 66 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V VA + IP V GGI+ +EDA GADK+SIN+ A+ DP+++ +L+ +G Sbjct: 67 FLETVRNVAAAVSIPLGVGGGIRGMEDADAAFKAGADKVSINTAAVKDPSIVAKLSREYG 126 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 Q +VV IDT + + R T +DW + V++ GAGE+++ ++ Sbjct: 127 SQSVVVAIDTRRINNEWRVFIM------GGRRETLLNAVDWARTVEELGAGELLVTSIDA 180 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG R GYD+E +++ + ++P+IASGGAG HFLE + D ALAASVFH +INI Sbjct: 181 DGTRAGYDIELYRRLADAVNIPVIASGGAGEPSHFLEVLKY--ADAALAASVFHMGVINI 238 Query: 242 GELKAYLATQGVEIRI 257 LKAYL+ G+ +RI Sbjct: 239 SILKAYLSELGIRVRI 254 >UniRef50_Q2P3J8 Imidazole glycerol phosphate synthase subunit hisF n=360 Tax=Bacteria RepID=HIS6_XANOM Length = 258 Score = 157 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 162/256 (63%), Positives = 194/256 (75%), Gaps = 1/256 (0%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML++RIIPCLDVR+G+VVKGV+F +H +GDIV LA RY +GADELVFYDI AS +GR Sbjct: 1 MLSRRIIPCLDVRNGRVVKGVKFHDHIDMGDIVELALRYRAQGADELVFYDIGASPEGRS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 VD +WV RVA +IDIPFCVAGGI +E A +L GADKISINSPAL P LI+ LAD F Sbjct: 61 VDYTWVERVARLIDIPFCVAGGIGDVETARAVLHAGADKISINSPALGRPQLISELADAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 GVQC+VVGID+ + + V +YTGD S+T+ TLDWV E Q+ GAGEIVLN M+ Sbjct: 121 GVQCVVVGIDSIREDDGQWR-VRRYTGDPSKTQALPMRTLDWVAEAQRLGAGEIVLNCMD 179 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGVR GYD+ QL++VR +CHVPLIASGGAG M+HF + F ADVDGALAASVFH I Sbjct: 180 NDGVRRGYDIAQLRQVRALCHVPLIASGGAGEMQHFADVFDQADVDGALAASVFHSGAIP 239 Query: 241 IGELKAYLATQGVEIR 256 I ELK +L Q +E+R Sbjct: 240 IPELKQFLRAQQIEVR 255 >UniRef50_C9RKR3 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKR3_FIBSS Length = 263 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 103/256 (40%), Positives = 152/256 (59%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+I CLDVR+ +V KGV+F+ + IGD V + RY++EG DELVFYDITAS++ R Sbjct: 1 MLTKRLIVCLDVRNRKVTKGVKFKGNIDIGDPVEMGARYSDEGVDELVFYDITASAENRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + ++A+ + IPF V GGI++L+D + L GA+K+S+NS A+ P +I A F Sbjct: 61 CDMEMIRQIAKRVFIPFAVGGGIRNLDDMHEALLAGAEKVSVNSLAVLHPEIIAEGAKAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIV+G+D + + K + + L W + ++ G GEI LN ++ Sbjct: 121 GRQCIVLGMDAKFVGVSDKIPSGYEVFIRGGRQAMGIDALQWAKRAEELGVGEICLNSID 180 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DGV+NGY+L + + VP+IASGGAGT H ++ FR D AL AS+ H Sbjct: 181 TDGVKNGYELTITDMIAKAVQVPVIASGGAGTPAHIVDLFRKTSADAALVASMVHFGDYT 240 Query: 241 IGELKAYLATQGVEIR 256 + +K + G+ +R Sbjct: 241 VPGIKGEMLAAGIPVR 256 >UniRef50_C4ZLR4 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Thauera sp. MZ1T RepID=C4ZLR4_THASP Length = 226 Score = 156 bits (395), Expect = 6e-37, Method: Composition-based stats. Identities = 95/257 (36%), Positives = 139/257 (54%), Gaps = 31/257 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCLDV+ G+VVKGV F GD V +A+RY E Sbjct: 1 MLAKRIIPCLDVKSGRVVKGVNFVELRDAGDPVEIARRYDE------------------- 41 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +VAE + IP V GG++ +ED ++L+ GADK+S+N+ A+ +P L+ A + Sbjct: 42 -------QVAEQVFIPLTVGGGVRVVEDVRRLLNAGADKVSMNTAAVNNPQLVFEAASKV 94 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIVV ID A T + ++W ++V+ GAGEI+L M+ Sbjct: 95 GSQCIVVAIDAKQTAPGKWEVFTH-----GGRNNTGLDAIEWARKVESLGAGEILLTSMD 149 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG ++G+DL + V + +P+IASGG GT+EH E + D LAAS+FH Sbjct: 150 RDGTKSGFDLALTRAVSDAVRIPVIASGGVGTLEHLAEGVSEGRADAVLAASIFHFGQHT 209 Query: 241 IGELKAYLATQGVEIRI 257 + E K + +G+E+R+ Sbjct: 210 VREAKELMRARGIEVRL 226 >UniRef50_B5YIB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_THEYD Length = 244 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 58/253 (22%), Positives = 113/253 (44%), Gaps = 14/253 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IIP +D++DG+ V+ Q + E + A R+ EGA+ L D+ + +G++ Sbjct: 1 MQIIPAIDLKDGKCVRLRQGKFSEVTVYYDNPEDAALRWQNEGAEVLHVVDLDGAKEGKI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ E V GGI+ +ED +LS G D++ + + A+ P + + RF Sbjct: 61 GNLPSIKKIREAFRGNIEVGGGIRRIEDIELLLSVGIDRVIVGTIAVQSPDFVKEVCKRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I G + + VT+ ++ ++Q G I+ ++ Sbjct: 121 PKKII-----------VGIDAKDGLVAVKGWVEVTEIRAIELALKMQDYGIWGIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++E K + E VP+IASGG ++E + + G + + I+ Sbjct: 170 RDGMLTGPNIEATKALVESVKVPVIASGGVSSIEDIRKLAEIPQLWGVITGKAIYSGAID 229 Query: 241 IGELKAYLATQGV 253 + E + GV Sbjct: 230 LKEALRIIKGDGV 242 >UniRef50_A3EUM5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Leptospirillum RepID=A3EUM5_9BACT Length = 247 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 105/249 (42%), Gaps = 15/249 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++ P +D+R+G+VV+ Q R + D V A ++ E G L D+ + +G Sbjct: 1 MQLYPAIDIRNGKVVRLTQGRFDQETVYGEDPVRTALQFRERGVQHLHVVDLDGAREGVP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V++S + + + V GG++S + A+ G ++ + + A+ DP + + ++ Sbjct: 61 VNRSLIREIVKAFRGFVQVGGGVRSKDIASFYYDAGVSRLILGTAAIKDPVFLGSMIEQH 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G ++ + + L+ + + + G V ++ Sbjct: 121 PD-----------LFYVGIDVKDESLAVNGWLDLDTQDPLEVMVRMSELGVRGFVYTDIH 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ +G + + + +R VP+IASGG + R+ VDGA+ + ++ Sbjct: 170 RDGLLSGPNFARYETLRRTVRVPVIASGGVRDISDIAR-LREIGVDGAIVGKAIYTGEMD 228 Query: 241 IGELKAYLA 249 + E L Sbjct: 229 LTEALRLLG 237 >UniRef50_B8D115 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halothermothrix orenii H 168 RepID=HIS4_HALOH Length = 237 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 14/247 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++DG V+ + ++ V +A + + GA L D+ + G Sbjct: 1 MEVIPAVDIKDGSCVRLKKGDFNKRRVYSTSPVDVALYWEKHGASRLHIVDLDGAKSGWP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +A ++IP V GGI+SL+ K L G D+I + + AL +P L+ R D F Sbjct: 61 THLKTIREIALRVNIPLQVGGGIRSLKVIKKYLDSGVDRIILGTVALKNPELVKRALDNF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IVVG E + +Q D + E+++ G + +N Sbjct: 121 GSNRIVVG----------VDARGGKVATEGWLKTSQVTVEDIISEMEEVGVKTFIYTDIN 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G D+E +K+V + +IASGG + + + + + A+ ++ + Sbjct: 171 RDGMLKGPDIEGIKRVLKSTKARIIASGGISSRQDLIN-LKAIGIKAAIVGKALYEGNLP 229 Query: 241 IGELKAY 247 + L Y Sbjct: 230 LEVLNQY 236 Score = 61.3 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 36/91 (39%), Gaps = 1/91 (1%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 +K GA + + ++ L+ ++++ ++PL GG +++ + D+ Sbjct: 38 YWEKHGASRLHIVDLDGAKSGWPTHLKTIREIALRVNIPLQVGGGIRSLKVIKKYL-DSG 96 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEI 255 VD + +V K + + + + Sbjct: 97 VDRIILGTVALKNPELVKRALDNFGSNRIVV 127 >UniRef50_B0TY42 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_FRAP2 Length = 241 Score = 156 bits (394), Expect = 7e-37, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 103/247 (41%), Gaps = 11/247 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+ +G+ V+ + ++ + +AK Y + GA+ + D+ + G+ Sbjct: 1 MNIFPAIDLINGKCVRLEKGDFNKTTTYELEPKDVAKAYQQAGAEFIHVVDLDGAKKGQT 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ E ++ V GG+K E K+L G D++ I S A+ D L + +++ Sbjct: 61 CQFETIQKIRENCNMTLQVGGGVKDFETIEKLLEIGVDRVVIGSLAVKDIALTKKFFEKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IV+ +D + + + + +Q G ++ ++ Sbjct: 121 GAEKIVLALDVFIKNGVPYIATH------GWQESSTTTLDEILQTYLGDGLEYVLCTDIS 174 Query: 181 QDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG+ G + E + V +ASGG G++E E ++ + G + ++ Sbjct: 175 RDGMLQGPNFELYRIYSSIYPDVQFMASGGVGSLEDL-EILKEQNTYGVIIGKALYENKF 233 Query: 240 NIGELKA 246 + E Sbjct: 234 TLQEALE 240 Score = 57.0 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 1/92 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 Q+ GA I + ++ E ++K+RE C++ L GG E + V Sbjct: 39 YQQAGAEFIHVVDLDGAKKGQTCQFETIQKIRENCNMTLQVGGGVKDFETIEKLLEI-GV 97 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D + S+ K I + + + + + Sbjct: 98 DRVVIGSLAVKDIALTKKFFEKYGAEKIVLAL 129 >UniRef50_C4Z0A8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Clostridiales RepID=C4Z0A8_EUBE2 Length = 362 Score = 156 bits (394), Expect = 8e-37, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 113/250 (45%), Gaps = 14/250 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQF---RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 R+ P +DV+DGQ V+ + +AK + E GA + D+ + G Sbjct: 1 MRLYPAIDVKDGQCVRLKKGLFNEVTVYSERPYEIAKGFEEAGAQFIHTVDLDGALKGHG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + ++ +++P + GGI++LE+ ++L G ++ I + A+ +P I DRF Sbjct: 61 VNAETIKKICSSVNVPVQMGGGIRTLENIQEVLDLGVYRVIIGTKAVENPDFIKAAIDRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IVVG + E +V+ L ++ G IV ++ Sbjct: 121 GAEHIVVG----------VDAKDGLVAIEGWEKVSDKTALSLALAMKDIGVQTIVYTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++EQ K + + + +IASGG M+ DA + GA+ +++ I+ Sbjct: 171 KDGMLAGPNVEQTKILSDKTGIDIIASGGMSCMDDLT-HINDAGIHGAIIGKAIYEKRID 229 Query: 241 IGELKAYLAT 250 + E + Sbjct: 230 LKEAVNLFES 239 Score = 66.7 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 1/99 (1%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + + ++ GA I ++ +G + E +KK+ +VP+ GG T+E+ Sbjct: 30 ERPYEIAKGFEEAGAQFIHTVDLDGALKGHGVNAETIKKICSSVNVPVQMGGGIRTLENI 89 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 E D V + + + I + + + Sbjct: 90 QEVL-DLGVYRVIIGTKAVENPDFIKAAIDRFGAEHIVV 127 >UniRef50_D1CF74 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CF74_THET1 Length = 243 Score = 156 bits (393), Expect = 8e-37, Method: Composition-based stats. Identities = 53/245 (21%), Positives = 99/245 (40%), Gaps = 16/245 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +GQ+V+ Q D V +A+++ GA L D+ + G Sbjct: 1 MIVIPAIDILEGQLVRLTQGDYSRKKVYSYDPVVVARKWKAIGAQWLHVVDLDGARQGHP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + V V GG+++LED I+ GA +I + + A+ DP + + ++ Sbjct: 61 VNVDVIKSVIMEFGPQVQVGGGLRTLEDIQSIVELGASRIVLGTSAVKDPEFLREVCAKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + N + T+ + + L+ + V+ G G I+ + Sbjct: 121 PDMVVAAL-----------DTRNGVVAIDGWTKSSGLDVLEVAKLVEDAGVGYILFTAIE 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG G D+ ++++ VP+IASGG E E A V + ++ Sbjct: 170 TDGTMTGPDIAAVQRLMSHVSVPVIASGGISEPEDLEE-LSKAGVYAVIVGKALYEGR-L 227 Query: 241 IGELK 245 E+ Sbjct: 228 PEEVI 232 >UniRef50_A2BQT3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=10 Tax=Cyanobacteria RepID=HIS4_PROMS Length = 255 Score = 156 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 111/256 (43%), Gaps = 16/256 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +G+ V+ + + + A+ + EGA + D+ A+ G Sbjct: 1 MDLIPAIDLMNGKCVRLFKGDFNKRKDFAKEPHEQAEFWEREGAKYIHIVDLDAAKTGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++A+ ++IP + GGI+S E ++ S+G +K+ + + A+ + L+ L+++F Sbjct: 61 TNDKSIKKIAKTVNIPIQIGGGIRSQERIEQLFSYGVEKVIMGTSAIENKELVKDLSNKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + G + + D V+E ++ +N Sbjct: 121 PGRI-----------IVGIDAKDGKVSTRGWLEQSNIFATDLVKEFSSFKIASFIVTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 DG G + E +K + E+ +P+IASGG G++ L F ++ + G + ++ Sbjct: 170 TDGTLEGTNEEFIKSILEITDIPVIASGGVGSISDLLSLVKFENSGLFGVIVGKALYENK 229 Query: 239 INIGELKAYLATQGVE 254 I E L+ + + Sbjct: 230 FTINEANNVLSAERLN 245 >UniRef50_Q2LTH2 Imidazole glycerol phosphate synthase, cyclase subunit n=3 Tax=Bacteria RepID=Q2LTH2_SYNAS Length = 254 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 97/257 (37%), Positives = 143/257 (55%), Gaps = 3/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M +I+PCLD+++G+VVKG+ F + GD V A Y EGADEL DI A+ + R Sbjct: 1 MKPIKIMPCLDMKEGRVVKGIHFVELKDAGDPVENAAFYQAEGADELAMLDIAATLENRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 WV++V+ V+ IP V GGI +LED +L GA KIS+NS A+ +P+L++ A +F Sbjct: 61 TRLEWVNKVSAVLTIPLTVGGGISTLEDIELVLQAGAAKISMNSAAVKNPSLVSEAAKKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I V + T + + W + Q+ GAG I+ M+ Sbjct: 121 GSEKITVA---IDARRNSQMPSGFELVVSGGTLPVARDAVAWARTCQELGAGVILPTSMD 177 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG R GYD+E K + + +P++ASGGAG +E F EA + LAASVFH + ++ Sbjct: 178 GDGTRAGYDIEYTKAIADAVDLPVVASGGAGKLEDFYEAVQKGGASILLAASVFHYRTLS 237 Query: 241 IGELKAYLATQGVEIRI 257 I +K YLA +G+ + I Sbjct: 238 IRAVKQYLADRGLPVII 254 >UniRef50_B2V6T1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Aquificales RepID=HIS4_SULSY Length = 239 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 110/250 (44%), Gaps = 17/250 (6%) Query: 1 MLAKR-IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASS 56 M K IIP +D++ G+VV+ + + + + +AK + + GA+ + D+ + Sbjct: 1 MTLKEFIIPAIDIKGGKVVRLYKGEFDKVKVYNENPIDMAKYFEDAGAEHIHVVDLDGAL 60 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +G + + + ++IP GG++S E +L G +++ I S A +P ++ Sbjct: 61 EGLPKNIKILESIVRSVNIPIEFGGGLRSFEAVKAVLDLGVERVVIGSLAYQNPEEFYKI 120 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + F + G + + T T+ L++ ++ + Sbjct: 121 VESFPNKV-----------IVGIDAKDGKVAIKGWTEKTEVSPLEFAKKYDDLDIFGFLF 169 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR--DADVDGALAASVF 234 +++DG G ++E ++ + P+IASGG G++E ++ + + + G + Sbjct: 170 TDVSRDGSMIGANVEATVELAKNLKHPVIASGGVGSLEDVIKLYEKREFGIFGVVVGKAI 229 Query: 235 HKQIINIGEL 244 ++ I++ E+ Sbjct: 230 YEGKIDLKEI 239 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 39/99 (39%), Gaps = 1/99 (1%) Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 +D + + GA I + ++ +++ L+ + ++P+ GG + E Sbjct: 33 NENPIDMAKYFEDAGAEHIHVVDLDGALEGLPKNIKILESIVRSVNIPIEFGGGLRSFE- 91 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 ++A D V+ + S+ ++ ++ + + Sbjct: 92 AVKAVLDLGVERVVIGSLAYQNPEEFYKIVESFPNKVIV 130 >UniRef50_A5INE6 Imidazole glycerol phosphate synthase subunit hisF n=7 Tax=cellular organisms RepID=HIS6_THEP1 Length = 254 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 126/257 (49%), Positives = 160/257 (62%), Gaps = 7/257 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRII CLDV+DG+VVKG F N GD V L K Y+E G DELVF DITAS + R Sbjct: 1 MLAKRIIACLDVKDGRVVKGTNFENLRDSGDPVELGKFYSEIGIDELVFLDITASVEKRK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V +VAE IDIPF V GGI E A++++ GADK+SIN+ A+ DP+LIT++A F Sbjct: 61 TMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVEDPSLITKIARTF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +VV ID S + T DWV EV++RGAGEI+L ++ Sbjct: 121 GSQAVVVAIDAKKVDGEFVV------FTYSGKKNTGILLRDWVVEVERRGAGEILLTSID 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + GYD E ++ VR + +P+IASGGAG MEHFLEAF A SVFH + I+ Sbjct: 175 RDGTKAGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA-SVFHFREID 233 Query: 241 IGELKAYLATQGVEIRI 257 + ELK YL GV +R+ Sbjct: 234 VRELKEYLKKHGVNVRL 250 >UniRef50_A4XL21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Clostridia RepID=HIS4_CALS8 Length = 237 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 14/248 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ DG+ V+ Q + D V AK + +EGA L D+ + G Sbjct: 1 MIVIPAIDIIDGKCVRLTQGDYSRVQEYNLDPVQQAKYFEKEGARYLHVVDLDGAKKGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + R+ E + GGI+ + L G D I + S +P + + RF Sbjct: 61 VNFEVIKRIKESTSLSVECGGGIRDKKTINDYLLAGIDYIILGSVIFKNPEFVEDVLKRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + + +D Y T+ + + ++K G +++ + Sbjct: 121 GNERFIASLDFEEG----------YVKLSGWQEATRISVEEGILHIKKLGFQKLIYTDIK 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG+ G++ E K +R + LI+SGG +M L+ +D VDG + + + Sbjct: 171 TDGMLKGHNFEAAKYIRSLFDGFLISSGGISSMNDVLK-LKDIGVDGVIIGKALYTGHVK 229 Query: 241 IGELKAYL 248 + E+ + Sbjct: 230 LNEIINLV 237 Score = 55.9 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 35/93 (37%), Gaps = 1/93 (1%) Query: 161 DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + +K GA + + ++ + + E +K+++E + + GG + + Sbjct: 34 QQAKYFEKEGARYLHVVDLDGAKKGSPVNFEVIKRIKESTSLSVECGGGIRDKKTINDYL 93 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLATQGV 253 A +D + SV K + ++ + Sbjct: 94 -LAGIDYIILGSVIFKNPEFVEDVLKRFGNERF 125 >UniRef50_Q0IDQ9 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IDQ9_SYNS3 Length = 255 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 92/256 (35%), Positives = 139/256 (54%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M RIIP LD++ G ++KGVQ +GD + AKRY+E GADEL+F D+ AS R Sbjct: 1 MRNLRIIPRLDIKSGTLIKGVQMEGWRKVGDPILAAKRYSEYGADELLFMDVVASLYERN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V +V + IP V GGI+ ++D +LS GADK+S+N+ AL P LI ++DR+ Sbjct: 61 TLHEIVEQVCSNVFIPVTVGGGIRKIKDVETLLSRGADKVSVNTGALLKPELINEISDRY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q + ++ + E ++WV+E + RGAGEIVL ++ Sbjct: 121 GSQA-----TVLTVECLKCGEKSWEALTDNGRNRSGREVIEWVKEAENRGAGEIVLTSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 QDG G+D++ + V + ++P+IASGG G H +E + DV GA A H + ++ Sbjct: 176 QDGRGYGFDIDLVDIVSQAVNIPIIASGGFGKPSHIVELIKSTDVSGAAIAQALHWEKVS 235 Query: 241 IGELKAYLATQGVEIR 256 E++ L V +R Sbjct: 236 FSEIRDSLRDNNVFLR 251 >UniRef50_P74106 Imidazole glycerol phosphate synthase subunit hisF n=67 Tax=Bacteria RepID=HIS6_SYNY3 Length = 261 Score = 155 bits (391), Expect = 2e-36, Method: Composition-based stats. Identities = 113/255 (44%), Positives = 150/255 (58%), Gaps = 2/255 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 LAKRI+PCLDV G+VVKG+ F + + GD V LA+ Y E GADELVF DITA+ + R Sbjct: 3 LAKRILPCLDVNAGRVVKGINFVDLQDAGDPVELARAYNEAGADELVFLDITATHEQRDT 62 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V R AE + IP V GGI +LE +L GADK+S+NS A+ DP I+R +DRFG Sbjct: 63 IIDVVYRTAEEVFIPLTVGGGISTLEHIKNLLRAGADKVSVNSSAVRDPDFISRASDRFG 122 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QCIVV ID + T + + W +EV KRGAGE+++ M+ Sbjct: 123 RQCIVVAIDARRRLDADNPG--WDVYVRGGRENTGLDAIAWAEEVAKRGAGELLVTSMDG 180 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG + GYDL + E +P+IASGGAG +H EAF + + AL AS+ H + I Sbjct: 181 DGTQAGYDLALTAAIAERVEIPVIASGGAGNCQHVYEAFTEGKAEAALLASLLHYGQLTI 240 Query: 242 GELKAYLATQGVEIR 256 GELK +L + + +R Sbjct: 241 GELKTFLEARQIPVR 255 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 1/88 (1%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA E+V + + ++ + + E +PL GG T+EH R A D Sbjct: 44 GADELVFLDITATHEQRDTIIDVVYRTAEEVFIPLTVGGGISTLEHIKNLLR-AGADKVS 102 Query: 230 AASVFHKQIINIGELKAYLATQGVEIRI 257 S + I Q + + I Sbjct: 103 VNSSAVRDPDFISRASDRFGRQCIVVAI 130 >UniRef50_C0QRW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Persephonella marina EX-H1 RepID=HIS4_PERMH Length = 241 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 103/244 (42%), Gaps = 16/244 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D++DG+ V+ + D V +AK++ E+GA L D+ + +G+ + Sbjct: 7 VIPAVDIKDGKAVRLYKGDPEAVTVYGDDPVSVAKQWEEKGAKHLHIVDLDGAFEGKPKN 66 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V + + + IP GG++S E I+ G +++ I S A + R+ + Sbjct: 67 IDIVKDIVKTVSIPVEFGGGLRSFEAVKSIVETGVERVVIGSLAYQNRQEFERIVSAYPG 126 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + G + + T++ LD+ + + +N+D Sbjct: 127 KV-----------IVGIDAKDGKVAIKGWLEKTEYTPLDFARMFDDLDIWGFLYTDVNRD 175 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQIIN 240 G G ++E K + + P+IASGG G++E + + V G + ++ I Sbjct: 176 GAMVGPNIEGTKYLAQNLKHPVIASGGVGSVEDLKKLYDLKKYGVYGVVVGKALYEGKIK 235 Query: 241 IGEL 244 + +L Sbjct: 236 LEQL 239 Score = 53.2 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 9/90 (10%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + +++GA + + ++ +++ +K + + +P+ GG + E +++ + Sbjct: 42 QWEEKGAKHLHIVDLDGAFEGKPKNIDIVKDIVKTVSIPVEFGGGLRSFE-AVKSIVETG 100 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVE 254 V+ + S+ ++ + + + + Sbjct: 101 VERVVIGSLAYQNRQEFERIVSAYPGKVIV 130 >UniRef50_D0LIZ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Nannocystineae RepID=D0LIZ1_HALO1 Length = 239 Score = 154 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 89/251 (35%), Gaps = 15/251 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D+ G VV+ Q + E + + +R+A GA+ + D+ + G Sbjct: 1 MKIYPAIDLLGGNVVRLHQGKRSEALVYSNEPAEIVRRFASAGAERVHVVDLDGAFSGER 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ +A +P V GGI+ + + GA + + A+ +P Sbjct: 61 AHREALAEMAAASPVPLQVGGGIRDRAALEAVFATGAGFAVLGTAAVKNPAFAREACAAH 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + E + + GA ++ + Sbjct: 121 PG-----------CVIVAVDARDGVVAIEGWVESAGITAEELGKRAADWGAAGLLYTDVM 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + G ++ + + +P+IASGG GT++ A A V + ++ Sbjct: 170 RDGAQVGPNIATTAALAQAVDIPVIASGGVGTLDDI-RALAAAGVPSVVVGRALYENKFT 228 Query: 241 IGELKAYLATQ 251 + E A + Sbjct: 229 LPEALAAARGE 239 >UniRef50_B9E171 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=8 Tax=Bacteria RepID=HIS4_CLOK1 Length = 238 Score = 154 bits (388), Expect = 4e-36, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 113/247 (45%), Gaps = 15/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D++ G+ V+ + + D A ++ EGA L D+ + G Sbjct: 1 MIILPAIDLKGGKCVRLYKGDMNSQEVVARDPFETALKFKSEGAQYLHMVDLDGALKGSG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +S++ + +D+P V GGI+++E K + G ++ + + AL + L+ + + + Sbjct: 61 ENLDIISKIVKNVDVPIEVGGGIRNIETIDKFIKLGVSRVILGTAALKNKELVIKAVENY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + G + + T +++ +D+ +E++K G ++ ++ Sbjct: 121 DEKI-----------AVGIDAKDGVPAADGWTTLSKTNYIDFGKEMEKIGVQTLIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G +LEQL K++ +IASGG +E ++ + +V GA+ + + ++ Sbjct: 170 KDGTLEGTNLEQLLKLKNSVKCNVIASGGIKDIEDI-KSLKKENVYGAIVGKAIYAKTLS 228 Query: 241 IGELKAY 247 + + Sbjct: 229 LKKAIEI 235 Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 2/86 (2%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA + + ++ +G +L+ + K+ + VP+ GG +E + + V + Sbjct: 43 GAQYLHMVDLDGALKGSGENLDIISKIVKNVDVPIEVGGGIRNIETIDKFIK-LGVSRVI 101 Query: 230 AASVFHKQIINIGELKAYLATQGVEI 255 + K + + + + + Sbjct: 102 LGTAALKNKELVIKAVENY-DEKIAV 126 >UniRef50_P62353 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Desulfovibrio RepID=HIS4_DESVH Length = 249 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 104/255 (40%), Gaps = 17/255 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQF---RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+ +G V+ + D V A+ + E+G L D+ + G+ Sbjct: 1 MIVFPAIDLMNGVCVRLRRGRADDETVFSSDPVATARHWQEQGGRWLHVVDLDGAFSGQP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + + +DIP + GGI+ A L G +++ I + AL +P L F Sbjct: 61 VNAPLIRSICDALDIPVQLGGGIRDAATAKAYLEAGVERLIIGTIALEEPDAYAALCAEF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V + + + + + + G I+ ++ Sbjct: 121 PGRIGVSL-----------DAEGGKLKTKGWVADSGLTVDEVLPRLLEAGTAFIIYTDID 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF---RDADVDGALAASVFHKQ 237 +DG++ G +L L+ + + VP+IA+GG T+E + R ++ GA++ ++ Sbjct: 170 RDGMQTGVNLPALEHLAKASTVPVIAAGGVATLEDVKALYPLSRTTNLQGAVSGRAIYEG 229 Query: 238 IINIGELKAYLATQG 252 +++ ++ Q Sbjct: 230 TLDLRTAMDWIRQQE 244 >UniRef50_Q2JK82 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=91 Tax=Bacteria RepID=HIS4_SYNJB Length = 261 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 14/248 (5%) Query: 5 RIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +IP +D+ G+ V+ Q ++ D + A+ +A +GA L D+ + G V Sbjct: 9 EVIPAIDLLQGRAVRLYQGDYAQAEQVADDPIQQAEAWAAQGAPRLHVVDLDGAKSGDPV 68 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + R+ + IP V GGI+SLE A ++L G D++ + + A+ DP + + F Sbjct: 69 NLPIIERIVRSLAIPVQVGGGIRSLERARQLLDLGVDRVIVGTLAVEDPDTLEAMTQAFP 128 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + G T + VQ VQ +GA I+ +++ Sbjct: 129 GRV-----------WVGIDARQGQVATRGWLSTTPLRAPELVQRVQAQGAAGIIYTDISR 177 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG G +LEQL+++ V VP+IASGG G++ L + GA+ + I++ Sbjct: 178 DGTLAGPNLEQLRQILAVSQVPVIASGGIGSLTDLLALLSLPRLTGAILGKALYSGAISL 237 Query: 242 GELKAYLA 249 E + Sbjct: 238 QEALRAVG 245 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 37/94 (39%), Gaps = 4/94 (4%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 +GA + + ++ + +L ++++ +P+ GG ++E + D V Sbjct: 46 WAAQGAPRLHVVDLDGAKSGDPVNLPIIERIVRSLAIPVQVGGGIRSLERARQLL-DLGV 104 Query: 226 DGALAASVFHKQIINIGELKAYLATQ---GVEIR 256 D + ++ + + + + G++ R Sbjct: 105 DRVIVGTLAVEDPDTLEAMTQAFPGRVWVGIDAR 138 >UniRef50_B4S4Z8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Chlorobiaceae RepID=HIS4_PROA2 Length = 261 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D++DG+ V+ + + + + +A + ++ A L D+ A+ G + Sbjct: 1 MLIIPAIDIKDGKCVRLTRGDFDQQKIYLDNPRDMAIIWRKQNAKMLHVVDLDAALTGTM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + +DIP V GGI+S ED + L G ++ I S A+ +P LI L F Sbjct: 61 VNFEKIREIVATLDIPVQVGGGIRSFEDVERYLGIGVSRVVIGSAAVTNPQLIAELLATF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G N + T + + + E++K G I+ ++ Sbjct: 121 SPS----------QIVVGIDAENGIPKIKGWTESSSMQDYELALEMKKLGVKRIIYTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG+ G E ++ + + ASGG + + + VD + ++ Sbjct: 171 RDGMMQGVGYESTRRFAMKAGMRVTASGGVTSSDDLKKLQTLEQYGVDSVIVGKALYESN 230 Query: 239 INIGEL 244 +L Sbjct: 231 FPCQQL 236 Score = 64.0 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 1/98 (1%) Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 D +K+ A + + ++ + E+++++ +P+ GG + E Sbjct: 31 NPRDMAIIWRKQNAKMLHVVDLDAALTGTMVNFEKIREIVATLDIPVQVGGGIRSFEDVE 90 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 V + S I EL A + + + Sbjct: 91 RYLGI-GVSRVVIGSAAVTNPQLIAELLATFSPSQIVV 127 >UniRef50_C5BV99 Imidazole glycerol phosphate synthase subunit hisF n=14 Tax=Bacteria RepID=HIS6_BEUC1 Length = 256 Score = 153 bits (386), Expect = 5e-36, Method: Composition-based stats. Identities = 103/254 (40%), Positives = 148/254 (58%), Gaps = 1/254 (0%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 A R++PCLDV G+VVKGV F + GD V LA+RY +GADE+ F D++AS+ GR Sbjct: 4 ALRVVPCLDVDGGRVVKGVNFLDLRDAGDPVELARRYDADGADEITFLDVSASTQGRATT 63 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 VS AE + +P V GG++++ D +L GADK+ +N+ A+A P L+T +A +G Sbjct: 64 LEMVSATAEQVFVPLTVGGGVRAVADVEALLRAGADKVGVNTAAIARPELLTEIAQHYGN 123 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 Q +V+ +D + T + ++W E RGAGE++LN ++ D Sbjct: 124 QVLVLSVDARRCPDGVVTDSGFEVTTHGGRTGTGIDAVEWAAEATSRGAGEVLLNSIDAD 183 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G G+D+E ++ VR V PL+ASGGAGT+E F+ A R D LAASVFH + I Sbjct: 184 GTTAGFDVEMIEAVRAVVDTPLVASGGAGTVEDFVAAARAG-ADAVLAASVFHYGTLTIS 242 Query: 243 ELKAYLATQGVEIR 256 E+KA L G E+R Sbjct: 243 EVKAALRDAGFEVR 256 >UniRef50_Q02YX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=8 Tax=Bacteria RepID=HIS4_LACLS Length = 246 Score = 153 bits (386), Expect = 6e-36, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 113/255 (44%), Gaps = 15/255 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+++G+ V+ + + + + +A+++ + GA L D+ + G+ Sbjct: 1 MEIIPAIDLQNGEAVRLYKGDYDKKTVYSKNPLEIAQKFEQMGAKYLHLVDLDGAKLGQT 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADR 119 + V ++ + ++ + GGI++L+ + L G +++ + + A P + L + Sbjct: 61 RNLEIVRKIKDQTNLKIEIGGGIRNLDTVSLYLEQIGVERVILGTAAAEKPDFLKELLVK 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 +G+ IVVG+D + T L ++++++K G +++ + Sbjct: 121 YGLSRIVVGVDIREG----------FVSTSGWLEKTTLPYLSFLKDLEKIGVKTVIVTDI 170 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG G + E ++ + + +I SGG A D+D G + +++ I Sbjct: 171 SKDGTLTGPNFELYDEISKETSLDVIVSGGVKDSSDIQRA-ADSDFYGIIVGKAYYEGKI 229 Query: 240 NIGELKAYLATQGVE 254 N+ + + + Sbjct: 230 NLEKEFNHANKKNYP 244 >UniRef50_B8FP23 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_DESHD Length = 250 Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 116/257 (45%), Gaps = 18/257 (7%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + R+ P +D+++G+ V+ +Q R V +A+++ E+GAD L D+ + G Sbjct: 1 MRMRLFPAIDLKEGKAVRLLQGRMEDATVYGEQPVEVARKFKEQGADSLHVVDLDGAFAG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + V+ + + ++ + + V GGI++LE ++L G +++ + + A+ +P L+ + Sbjct: 61 KPVNDAVILKLIQSSGLRVQVGGGIRTLERIEELLKLGVERVILGTVAVRNPELVEKAVQ 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 RF ++ + + T+ + LD ++K G +V Sbjct: 121 RFEEAVVIGI-----------DAKDGLVAVQGWAEKTEIKALDLALRMKKVGVKHLVFTD 169 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVD--GALAASVF 234 +++DG+ G +++ ++ + + ++ASGG +E +A V GA+ Sbjct: 170 ISRDGMLQGPNIQSTVELARLSGLQVVASGGVSRLEDLRLLQEEANRGVSLEGAIVGKAL 229 Query: 235 HKQIINIGELKAYLATQ 251 + ++ E + + Sbjct: 230 YAGAFSLAEALRVVGQR 246 >UniRef50_UPI0001C41EB6 phosphoribosylformimino-5- aminoimidazole carboxamide ribotide isomerase HisA n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41EB6 Length = 246 Score = 152 bits (385), Expect = 9e-36, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 118/248 (47%), Gaps = 15/248 (6%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 I+P +D+R G+ V+ VQ + +I + +AK++ + GA+ + D+ + + Sbjct: 7 KMLIMPAVDIRGGKCVQLVQGKPGSEQVVIENPEKVAKKWEDAGAEVVHVIDLDGALESV 66 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + + ++ + +P + GGI+S+E A ++L+ D++ I + + +P +I++L++ Sbjct: 67 -TNIETIKKILNEVSVPIQLGGGIRSIEYAEELLNLDIDRLIIGTMGIKNPEIISKLSNE 125 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 +G + +++ + + + + +E Q+ GAG I+ + Sbjct: 126 YGSERVMISL----------DSKDNKVVIKGWQEKIDKSASEISKEFQELGAGSILFTNV 175 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + +G+ G+ ++ + + + +P++ SGG +++ + + G + S +K I Sbjct: 176 DVEGLLGGFYVDPVIDLVDSVDIPVVYSGGVTSLDDLKQ-LQTTGAKGVVIGSALYKDKI 234 Query: 240 NIGELKAY 247 + + Y Sbjct: 235 KLEDALKY 242 Score = 50.1 bits (118), Expect = 7e-05, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 + GA + + ++ + ++E +KK+ VP+ GG ++E+ E + D+ Sbjct: 46 WEDAGAEVVHVIDLDGAL-ESVTNIETIKKILNEVSVPIQLGGGIRSIEYAEELL-NLDI 103 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D + ++ K I +L ++ V I + Sbjct: 104 DRLIIGTMGIKNPEIISKLSNEYGSERVMISL 135 Score = 44.3 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 2/119 (1%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 R++ LD +D +VV ++ +I ++K + E GA ++F ++ Sbjct: 130 RVMISLDSKDNKVV--IKGWQEKIDKSASEISKEFQELGAGSILFTNVDVEGLLGGFYVD 187 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 V + + +DIP +GG+ SL+D ++ + GA + I S D + ++ Sbjct: 188 PVIDLVDSVDIPVVYSGGVTSLDDLKQLQTTGAKGVVIGSALYKDKIKLEDALKYQNIE 246 >UniRef50_Q3AD49 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Clostridia RepID=HIS4_CARHZ Length = 243 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 99/253 (39%), Gaps = 16/253 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +VV+ Q V LA +Y E GA + D+ + G Sbjct: 1 MILIPAIDLMGKKVVRLTQGEKERKTEYPISPVELALKYQEAGARLIHVVDLDRAFTGES 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ + + + IP V GGI+ +E +++ G ++ + + A+ +P L+ Sbjct: 61 ENFEVIAEIIKNVSIPVQVGGGIRDIESFRELIDLGVSRVIVGTIAVTNPELLEE----- 115 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + G N + + + + LD +V++ G I+ + Sbjct: 116 ------MLTLDRDKVAVGIDAKNGWVAIKGWVESSNYRALDLAYKVKEMGVTTIIYTDIA 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR--DADVDGALAASVFHKQI 238 +DG G + + K+ + +IASGG +E + + G +A + Sbjct: 170 RDGSLTGPNFNETLKLAIDTGLKVIASGGISGLEDLRRWRELGENKIYGVIAGKAILEGK 229 Query: 239 INIGELKAYLATQ 251 I++ E L + Sbjct: 230 IDLKEGIRILEGE 242 >UniRef50_A3CNT1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Bacilli RepID=HIS4_STRSV Length = 242 Score = 152 bits (384), Expect = 1e-35, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 111/250 (44%), Gaps = 15/250 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ +I+P +D++DGQ V+ + + D++ A+ + E G + D+ + +G Sbjct: 1 MSMKILPAIDIKDGQAVRLFKGDFSQKTVVNPDVLEQARVFKEAGVTMIHVVDLEGALEG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R ++ ++++ + V GGI+SLE L+ G D++ I S A+ +P + + Sbjct: 61 RAANRDLIAQIKAETGLAIQVGGGIRSLEQIEDYLAVGIDRVIIGSMAVKNPEFVEAALE 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 RFG IV+G E + + + ++K G V Sbjct: 121 RFGSGKIVIG----------IDAKEGLVATEGWLETSNQDYISLALAMEKIGVRLFVYTD 170 Query: 179 MNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +++DG G +++ +K+ +IASGG + + E + + GA+ ++ Sbjct: 171 VDRDGTLTGPNIQHYQKLLASLKHAQVIASGGIQSADDLEEM-KKLGLAGAIVGKAYYSG 229 Query: 238 IINIGELKAY 247 I++ ++K Sbjct: 230 RISLEQIKEA 239 Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 28/86 (32%), Gaps = 1/86 (1%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 G I + + + + + +++ + + GG ++E + +D + Sbjct: 45 GVTMIHVVDLEGALEGRAANRDLIAQIKAETGLAIQVGGGIRSLEQIEDYL-AVGIDRVI 103 Query: 230 AASVFHKQIINIGELKAYLATQGVEI 255 S+ K + + + I Sbjct: 104 IGSMAVKNPEFVEAALERFGSGKIVI 129 >UniRef50_Q3ZYM9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=15 Tax=root RepID=HIS4_DEHSC Length = 244 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 15/249 (6%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 IIP +D+ G+ V+ Q + D V A R+ GA L D+ ++DG+ Sbjct: 7 KIEIIPAIDILGGRCVRLFQGDYAQETVYSSDPVGTAMRWQSLGAPRLHVVDLDGAADGQ 66 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V+ + +A IP V GGI+S+E K+L G D++ + + A+ +P L+ + R Sbjct: 67 SVNFELIKEIANSALIPVEVGGGIRSMETVKKLLVAGVDRVILGTAAVENPELVKEICAR 126 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 + N T+ + L+ + ++K G + + Sbjct: 127 Y-----------ADSVAVSIDARNGKVATRGWVTNTEIDALELARSMKKLGIRRFIYTDI 175 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG + + ++ + +VP+IASGG ++ H +D +GA+ + + Sbjct: 176 SRDGTLSEPNFAAIRDLISAINVPVIASGGVSSLSHL-RLLKDIGAEGAIVGKAIYTGDL 234 Query: 240 NIGELKAYL 248 N+ L Sbjct: 235 NLKRAFEDL 243 >UniRef50_C0RFX3 Imidazole glycerol phosphate synthase subunit hisF n=420 Tax=cellular organisms RepID=HIS6_BRUMB Length = 261 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 108/256 (42%), Positives = 150/256 (58%), Gaps = 1/256 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L R+IPCLDV+DG+VVKGV F + GD V A+ Y GADEL F DITASSD R Sbjct: 3 LKARVIPCLDVKDGRVVKGVNFVDLIDAGDPVEAARAYDAAGADELCFLDITASSDNRET 62 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V+R AE +P V GG++ + D K+L GADK+SIN+ A+ +P + AD+FG Sbjct: 63 IFDVVARTAEQCFMPLTVGGGVRQVADIRKLLLAGADKVSINTAAVKNPEFVAEAADKFG 122 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QCIVV ID + G+ + + T + +++ Q+V GAGEI+L M++ Sbjct: 123 NQCIVVAIDAKKVSGAGENDHWEIFTH-GGRQPTGIDAVEFAQKVVDLGAGEILLTSMDR 181 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG + GYD+ + V + P+IASGG GT++H + RD LAAS+FH I Sbjct: 182 DGTKAGYDVALTRAVADSVRAPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTYTI 241 Query: 242 GELKAYLATQGVEIRI 257 GE K Y+A G+ +R+ Sbjct: 242 GEAKRYMAEAGIPMRL 257 >UniRef50_Q18C71 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Firmicutes RepID=HIS4_CLOD6 Length = 240 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 107/248 (43%), Gaps = 15/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++D + V+ Q + + + +A ++ EGA+ + D+ + Sbjct: 1 MIIFPAIDIKDNKCVRLTQGEFDKVNVYYDNPLEVAYKWKNEGAEYIHIVDLNGARSEFG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + +A IDIP V GG++ E +++ G ++ + S A+ + L+ L + + Sbjct: 61 VNTKIIEDIANNIDIPIQVGGGVRDKEKVKSLINAGVTRVILGSIAIENLNLVEELVNEY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + V+ ++L ++++K G IV ++ Sbjct: 121 KEKI-----------VVSIDAKDGKVAVRGWEVVSNVDSLTLCKQLEKIGVQTIVYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G + + +++ + + +IASGG ++E + ++ GA+ + + I+ Sbjct: 170 KDGMLQGPNFDIYERIAKETSLNVIASGGVTSIEDVKR-LKAMNLYGAIIGKALYDKKID 228 Query: 241 IGELKAYL 248 E + Sbjct: 229 FKEAQQLC 236 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Query: 164 QEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA 223 + + GA I + +N G + + ++ + +P+ GG E ++ +A Sbjct: 37 YKWKNEGAEYIHIVDLNGARSEFGVNTKIIEDIANNIDIPIQVGGGVRDKEKV-KSLINA 95 Query: 224 DVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 V + S+ + + + EL + + + I Sbjct: 96 GVTRVILGSIAIENLNLVEELVNEYK-EKIVVSI 128 >UniRef50_C8PKX5 Imidazole glycerol phosphate synthase subunit hisF n=3 Tax=Bacteria RepID=C8PKX5_9PROT Length = 306 Score = 151 bits (381), Expect = 3e-35, Method: Composition-based stats. Identities = 124/304 (40%), Positives = 163/304 (53%), Gaps = 51/304 (16%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 AKRIIPCLDV+DG+VVKGV F GD V +AKRY EEGADEL F DITAS GR Sbjct: 5 AKRIIPCLDVKDGRVVKGVNFVGLVDAGDPVEIAKRYNEEGADELCFLDITASHLGRDTI 64 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V RVA + IP V GGI++++D +++L+ G DKIS+NS A+ +P LI A++FG Sbjct: 65 VDVVERVARELFIPLTVGGGIRTIDDISRLLNVGCDKISLNSAAIKNPNLIDEAANKFGS 124 Query: 123 QCIVVGIDTWYDAETGKYH----------------------------------------- 141 QC+V+ ID ++ Sbjct: 125 QCVVIAIDAKRNSIEISRGDLYGEARNSNGDLHGGMRNPDTNLGSEARNFGEILRGAQDE 184 Query: 142 --------VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL 193 T + L W +E Q+RGAGEI+L M+ DGV+NG++L L Sbjct: 185 ILTGNGELCGYSVFINGGRLDTGRDALAWAKEAQERGAGEILLTSMDCDGVKNGFEL-NL 243 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 ++ +P+IASGGAG MEHF +AF A D LAAS+FH + I I LKAYL QG+ Sbjct: 244 TRIFSALDIPVIASGGAGKMEHFKDAF-LAGADACLAASIFHFREIEIKALKAYLQEQGI 302 Query: 254 EIRI 257 E+R+ Sbjct: 303 EVRL 306 >UniRef50_B3QRR1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Chlorobiaceae RepID=HIS4_CHLT3 Length = 262 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 53/252 (21%), Positives = 110/252 (43%), Gaps = 15/252 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D++ G+ V+ + + + + +A + ++ A + D+ A+ G+ Sbjct: 1 MLIIPAIDIKGGKCVRLTRGDFEQEKIYLDEPSDMAIIWRKQNAKLIHVVDLDAALTGKP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ + +DIP + GGI++ EDAA+ L G ++ I S A+ +P+L+++L +++ Sbjct: 61 ENFDKIKQIVDTLDIPIEIGGGIRTAEDAARYLDIGVYRVVIGSAAVKNPSLVSQLIEKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + IVVG + T +Q + + E++ RG I+ + Sbjct: 121 GPRKIVVG----------IDAEDGIAKISGWTESSQKKDYELALEMKDRGVERIIYTDIT 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG G E K E + + ASGG + + VD + +++ Sbjct: 171 RDGTLEGVGYETTKAFAEKAQMRITASGGVFGKQDLSKLCKLEHLGVDSVIIGKALYEER 230 Query: 239 INIGELKAYLAT 250 +L Sbjct: 231 FPCQKLWHLFEE 242 Score = 67.4 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 1/94 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 +K+ A I + ++ + +++K++ + +P+ GG T E Sbjct: 35 MAIIWRKQNAKLIHVVDLDAALTGKPENFDKIKQIVDTLDIPIEIGGGIRTAEDAARYL- 93 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 D V + S K + +L + + + Sbjct: 94 DIGVYRVVIGSAAVKNPSLVSQLIEKYGPRKIVV 127 >UniRef50_Q2SCV5 Imidazoleglycerol-phosphate synthase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCV5_HAHCH Length = 255 Score = 150 bits (379), Expect = 4e-35, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 148/260 (56%), Gaps = 8/260 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KRIIP L + G++VKG QF GD V A+ Y + ADELVF D+ A+ G Sbjct: 1 MLKKRIIPMLLLSQGRMVKGKQFSAFRDTGDPVSAARIYNAQFADELVFLDVDANRQGSD 60 Query: 61 VD--KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + + +V+ +P V GG+ S+E +++ GADK+ I + AL +P LI + Sbjct: 61 FEQLLNLIDKVSSECFMPLSVGGGVNSVEQVRRLVQSGADKVVITTAALENPGLINDASA 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 FG QCIVVG+D + + + + T+ E ++++++ +RGAGE ++N Sbjct: 121 IFGRQCIVVGLDVKREDGAYRLYSHC------GRHKTERELEEFIRDMTQRGAGEFIVNA 174 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +++DG+ GYDLE +K + V P++A+GGAGT H AF++A+ D + AS+FH Sbjct: 175 VDRDGMMQGYDLEMIKCAKAVTDRPVLAAGGAGTFAHLTAAFQEANADAVVCASIFHFGD 234 Query: 239 INIGELKAYLATQGVEIRIC 258 N +++L G+ +++ Sbjct: 235 NNPIRARSHLLNAGIPMKLI 254 >UniRef50_B8J249 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Desulfovibrionales RepID=HIS4_DESDA Length = 250 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 105/255 (41%), Gaps = 17/255 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+++G+ V+ Q R HE V A+ + E GA L D+ + DG Sbjct: 1 MIIFPAVDIQNGKAVRLKQGRAHESTVFAESPVDAARAWEEAGARWLHVVDLDGAFDGAA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V + + IP + GGI+ + A L G ++ I + AL PTL + F Sbjct: 61 QSRRIVRDICAALAIPVQLGGGIRDMHTAEAYLEAGVSRLIIGTLALEQPTLFADMCRAF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V T + + GA ++ + Sbjct: 121 PGRVGVSL-----------DAEGGRLKSRGWVEDTGMTVDTALPRLLDDGAAFVIYTDIE 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF---RDADVDGALAASVFHKQ 237 +DG++ G ++ L+ + + VP+IA+GG T+E + + + + GA++ ++ Sbjct: 170 RDGMQCGVNVAALEHLARLSTVPVIAAGGVATLEDIQKLYPLTLETSLMGAVSGRALYEG 229 Query: 238 IINIGELKAYLATQG 252 +++ E A++ + Sbjct: 230 TLDLKEANAWIDARK 244 >UniRef50_C4FS06 Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FS06_9FIRM Length = 256 Score = 150 bits (378), Expect = 5e-35, Method: Composition-based stats. Identities = 102/257 (39%), Positives = 150/257 (58%), Gaps = 3/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRIIPCL V +G+V GVQFR+ GD V A+RY +GADELV DITA+++ R Sbjct: 1 MLAKRIIPCLGVANGRVQNGVQFRDMVDAGDPVECAERYEIQGADELVLLDITATTEARK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V ++ + +P V GGI S+ED +++ GADK+SIN+ AL++P+LIT A +F Sbjct: 61 TFTDIVLNASDKVFMPLTVGGGITSVEDMTQLMKAGADKVSINTAALSNPSLITEGAKKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q IVV +D Y+ G + L+W +E RGAGE+++ ++ Sbjct: 121 GNQGIVVCLDVKYNPFEKM-WYAYGHGTSNDPGAQCKNALEWAKEAVDRGAGELLVTSID 179 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI-I 239 + G G+D+E + + EV VP+ A GGAG ++HF++ F +V GAL AS + Sbjct: 180 RHGTGLGFDIELYQALAEVVDVPVTAFGGAGNIQHFVDLFTKTNVTGAL-ASALLHNKVL 238 Query: 240 NIGELKAYLATQGVEIR 256 I ++K L G+ +R Sbjct: 239 TIKDIKKALHAAGIVVR 255 >UniRef50_C0W9Y4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9Y4_9FIRM Length = 245 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 102/255 (40%), Gaps = 16/255 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M A + P +D+R G V+ + + D +A+R+AE GA + D+ + Sbjct: 1 MEAMNLYPAIDLRGGMCVRLEKGNFSKETVYSKDPGAMARRFAEAGARTIHVVDLDGALA 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G+ + S + + I V GGI++ E +LS G ++ + S A+ DP L+ R Sbjct: 61 GKSENLSAIKAILREGGISIEVGGGIRTYEQIEGLLSLGVSQVILGSAAIYDPQLVERAN 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 F + G N Y + + + + V G I+ Sbjct: 121 RDFPYKI-----------VVGIDAKNGYAAADGWEKDSNLTAEALARRVAAAGTERIIFT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE--AFRDADVDGALAASVFH 235 +++DG+ NG ++E + + C VP+ ASGG ++E A ++G + + Sbjct: 170 DISRDGMMNGSNIEATAALYQACGVPITASGGVSSLEDIRRLKARETDGIEGCIIGKALY 229 Query: 236 KQIINIGELKAYLAT 250 ++ + Sbjct: 230 AGAFSLSDALKIAGE 244 >UniRef50_Q58927 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Euryarchaeota RepID=HIS4_METJA Length = 237 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 120/250 (48%), Gaps = 16/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D++D + V+ +Q ++ + + V +AK++ +EGA+ L D+ A+ G Sbjct: 1 MIIIPAVDLKDKKCVQLIQGDPNKKHLELNNPVEVAKKFVDEGAEYLHIIDLDAAF-GTG 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + + + +++P V GGI++LE A +++S G D++ + + A+ +P I L Sbjct: 60 NNRDVIKNIIKEVNVPVEVGGGIRNLEIAKELISLGVDRVIVGTKAILEPKFIDDLNKEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IV+ ++ K + + G I+ ++ Sbjct: 120 GKDKIVLAVECKEGKVVIKGWKEKVDKTPIEVIKEFEDK-----------VGYILFTNVD 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G+ G +++ +K++ E +P+I SGG T+E +A ++ + G + S +K +I+ Sbjct: 169 VEGLLKGINVDIIKELIEKTDIPIIYSGGITTLEDI-KALKELGIYGVVIGSALYKGLID 227 Query: 241 IGELKAYLAT 250 + + + Sbjct: 228 LKKALEIVKN 237 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 34/92 (36%), Gaps = 2/92 (2%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 GA + + ++ G + + +K + + +VP+ GG +E + V Sbjct: 39 FVDEGAEYLHIIDLDAA-FGTGNNRDVIKNIIKEVNVPVEVGGGIRNLE-IAKELISLGV 96 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D + + + I +L + + + + Sbjct: 97 DRVIVGTKAILEPKFIDDLNKEIGKDKIVLAV 128 >UniRef50_P62356 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Thermus RepID=HIS4_THET2 Length = 235 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 14/244 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 R+IP +D++ G+ V+ + GD V A R+ EEGA L D+ + G Sbjct: 1 MRLIPAVDLKSGKAVRLYEGDPARETPYGDPVEAALRFQEEGATLLHLVDLDRAL-GTGE 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 ++ V RVA + IPF +AGGI+SLE + LS GA + + + A+ DP L+ R+ + G Sbjct: 60 NREAVRRVAASLSIPFQLAGGIRSLEALQEALSLGASRAVVGTVAVKDPGLLARMLEAVG 119 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V LD ++ + G ++ + + Sbjct: 120 PDRLAVA----------LDARGLEVVVSGWQEAASASALDLLRAWAEMGVRTLLYTDVRR 169 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG G D E + +VR LI GG + E + VDGAL ++ I + Sbjct: 170 DGTLLGLDREVVARVRAAWPHELIVGGGIASPEDLH-LLQALGVDGALIGKALYEGRIRL 228 Query: 242 GELK 245 E Sbjct: 229 KEAV 232 Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 2/92 (2%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 Q+ GA + L +++ G + E +++V +P +GG ++E EA Sbjct: 38 FQEEGATLLHLVDLDRAL-GTGENREAVRRVAASLSIPFQLAGGIRSLEALQEAL-SLGA 95 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 A+ +V K + + + + + + Sbjct: 96 SRAVVGTVAVKDPGLLARMLEAVGPDRLAVAL 127 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 2/111 (1%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSR 68 LD R +VV V + L + +AE G L++ D+ +D+ V+R Sbjct: 126 ALDARGLEVV--VSGWQEAASASALDLLRAWAEMGVRTLLYTDVRRDGTLLGLDREVVAR 183 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V V GGI S ED + + G D I + R Sbjct: 184 VRAAWPHELIVGGGIASPEDLHLLQALGVDGALIGKALYEGRIRLKEAVWR 234 >UniRef50_A6Q4V9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Proteobacteria RepID=HIS4_NITSB Length = 238 Score = 149 bits (376), Expect = 9e-35, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 101/250 (40%), Gaps = 16/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D++DG+ V+ + + +AKR+ E G+ L D+ + G Sbjct: 1 MEILPAIDLKDGKAVRLTKGLMESAKIYSDEPWQVAKRFEEMGSRWLHLVDLNGAFAGEP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ + + GGI+ E K + G +++ + S A+ +P + +A ++ Sbjct: 61 KNLEQIKKIRANTSLKIELGGGIRDEETIRKYIDLGIERLILGSIAVKNPQFVKAMAAKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + G ++ + E + + D +E K G I+ + Sbjct: 121 PIAV-------------GIDAIDGFVAVEGWAKTSTMRATDLAREFAKSGVQAIICTDVG 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G +++ + E + IASGG +E + V G + F++ ++ Sbjct: 168 KDGTLSGVNVDFTVSIAEASGIDTIASGGVRDIEDIKKLQATGTVAGVIVGKAFYEGTLD 227 Query: 241 IGELKAYLAT 250 + E + Sbjct: 228 LEEAFRLVQN 237 >UniRef50_Q65EG2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=18 Tax=Bacillales RepID=HIS4_BACLD Length = 245 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 107/256 (41%), Gaps = 16/256 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M + P +D+R+G+ V+ +Q + + +A R+AEEGA + D+ + + Sbjct: 1 MSEFTVYPAIDIRNGKCVRLIQGDYEKETIYGHSPLEMASRFAEEGASWIHLVDLDGARE 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G+ V+ V +A+ +D+ V GGI++ +D LS G +++ + S A+++ + ++ Sbjct: 61 GKKVNGGHVISIADKLDVKVQVGGGIRTEKDVYDYLSQGVERVILGSSAVSNTEFVKKML 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 +G + + + E + + +E+ GA + Sbjct: 121 KAYGGHIAIGL-----------DARDGFVSTEGWLETSSVRAEELGRELANEGAEVFIFT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFH 235 + DG+ +G ++ ++ +IASGG ++ A V GA+ + Sbjct: 170 DIATDGMLSGPNINSTVELARATGKQVIASGGVSSLADLEALASRASEGVSGAIVGKALY 229 Query: 236 KQIINIGELKAYLATQ 251 + E +A + Sbjct: 230 TNQFTVAEALERVAAK 245 >UniRef50_Q1R079 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=31 Tax=cellular organisms RepID=HIS4_CHRSD Length = 249 Score = 149 bits (375), Expect = 1e-34, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 105/254 (41%), Gaps = 17/254 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++DGQ V+ Q R D V +A R+ E GA L D+ + +G+ Sbjct: 1 MLVIPAIDLKDGQCVRLKQGRMDDSTTYGDDPVAMAARWVETGARRLHLVDLNGAFEGKP 60 Query: 61 VDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V+ V+ +A +P + GGI++ E L G + I + A+ +P + + R Sbjct: 61 VNAEAVTAIARAYPDLPIQIGGGIRTAETIEAYLEAGVSYVIIGTQAVKEPAFVGEMCRR 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 F IV + Y + V+ + +D + G IV + Sbjct: 121 FPGHVIVGL-----------DARDGYVATDGWAEVSTLKAVDLAKRFADDGVSSIVYTDI 169 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR--DADVDGALAASVFHKQ 237 +DG+ G ++ ++ +P+IASGG + DA + GA+ ++ Sbjct: 170 ARDGMMQGVNIAATAELAREGGLPVIASGGVTHLGDIEALLEVADAGILGAITGRAIYEG 229 Query: 238 IINIGELKAYLATQ 251 +++ E + Q Sbjct: 230 KLDVAEAQRLCDAQ 243 >UniRef50_Q4FNT6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=root RepID=HIS4_PELUB Length = 239 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 105/250 (42%), Gaps = 14/250 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D++D + V+ ++ E V A +Y + G L D+ + G Sbjct: 1 MKIFPAIDIKDKKCVRLIKGDFNNKTEYEISPVDQAGKYKDHGFKNLHIVDLDGALTGET 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + D+ V GG++S++ K ++ G +K+ + S A+ + + +F Sbjct: 61 VNLDIIKEIVHKFDLKIEVGGGVRSIDSIEKYINAGVEKVILGSAAIKNKNFLKEACQKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + + Y + TLD+++EV GA ++ +N Sbjct: 121 PNKIALGL-----------DAKDGYLSVSGWKENSNQLTLDFLKEVNDYGASRLIYTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG + + E+ V V + P+I SGG +++ +A +++G + + I Sbjct: 170 RDGTKESPNFEETTNVANVSNCPVIISGGVSSIDDIKKAKGLKNIEGIIVGKAIYDGDIK 229 Query: 241 IGELKAYLAT 250 + EL L Sbjct: 230 LEELVKELDA 239 >UniRef50_UPI0001C3165B phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3165B Length = 246 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 106/251 (42%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+R G V+ Q D + A+ + E GA L D+ + DGR Sbjct: 1 MILYPAIDIRGGSAVRLRQGDFADETVYDADPLSAARAWVEGGARWLHVVDLDGARDGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + R+A + +P GG++S + GA+++ + + A AD + + + Sbjct: 61 ANLEHLRRIAGELGVPVEFGGGLRSRASVDAAIEAGAERVILGTAAFADVDFLDDVVAAY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + +V T+ E + +Q+RG ++V + + Sbjct: 121 GERVVVSV-----------DVRGGKVASAGWKEQTEMEAAAVIDHLQRRGVRKLVYSNIE 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG+ G DL+++++V E I SGG G+++H R +++G + +++ Sbjct: 170 RDGMLTGPDLDEVRRVAESVRGSFIYSGGIGSLDHLAALASLRQVNLNGVIVGKALYERK 229 Query: 239 INIGELKAYLA 249 +G+ L Sbjct: 230 FTVGDALTALK 240 Score = 50.5 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 4/94 (4%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 + GA + + ++ +LE L+++ VP+ GG + A A Sbjct: 39 WVEGGARWLHVVDLDGARDGRPANLEHLRRIAGELGVPVEFGGGLRSRASVDAAIE-AGA 97 Query: 226 DGALAASVFHKQIINIGELKAYLATQ---GVEIR 256 + + + + + ++ A + V++R Sbjct: 98 ERVILGTAAFADVDFLDDVVAAYGERVVVSVDVR 131 >UniRef50_B6BGE0 Imidazole glycerol phosphate synthase, cyclase subunit HisF n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGE0_9PROT Length = 254 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 84/257 (32%), Positives = 144/257 (56%), Gaps = 5/257 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M R+I +D+++ +KG+ +G+ +A RY E+G DE+V D AS R Sbjct: 1 MKKIRVIARIDIKNEHTIKGIHLEGLRKVGNPNEMALRYYEDGIDEIVLMDAVASLYDRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 K + + E I IP V GG+++L+D + L+ GADK++IN+ A+ +P+ IT + +F Sbjct: 61 SLKDVIVKACEDIFIPITVGGGLRNLQDIQEALNSGADKVAINTQAIREPSFITTASKQF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI+ I + E+ T + L W +EVQ+ GAGEI+L ++ Sbjct: 121 GSQCIISSIVAKKIDDGKWEAY-----IENGREPTGVDVLAWAKEVQELGAGEIMLTSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++G + G+DLE K V E+ ++P+I+SGGAG+ + + +D+D AS+ H ++ + Sbjct: 176 KEGTKKGFDLELNKAVAELVNIPVISSGGAGSTKDIVHLCESSDIDAVAIASILHYKLES 235 Query: 241 IGELKAYLATQGVEIRI 257 + E+K L +++RI Sbjct: 236 VSEIKKTLINNKIKVRI 252 >UniRef50_Q3SPZ7 Histidine biosynthesis n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SPZ7_NITWN Length = 258 Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats. Identities = 86/257 (33%), Positives = 137/257 (53%), Gaps = 7/257 (2%) Query: 1 MLAKRIIPCLDVRDGQVVK-GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 ML KR+IP +RDG++VK F N I G+ V AK Y + G DEL+ DI S+ R Sbjct: 1 MLKKRLIPKFLLRDGRLVKYTCFFDNERIAGNPVTTAKVYNDYGVDELIVLDIVPSAASR 60 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + + R++E I +PF V GG+K+ ED +L GADK+SINS A+ P + A Sbjct: 61 ARVEDIIGRMSEEIFMPFTVGGGVKTAEDVNALLRAGADKVSINSEAVRRPEFVREAART 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FG QCI V ID + + ++W + GEI+++ + Sbjct: 121 FGDQCITVSIDYKRIGSHHAS-----VYIDGGREHVALDPVEWALRCEDLHCGEILMSSI 175 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG GYDLE + + + VP+I SGG G+++H ++A A +S+F Sbjct: 176 DRDGTMQGYDLEMINTLTKRLGVPMIVSGGCGSLQHAIDALE-AGASAVAISSMFLFTDH 234 Query: 240 NIGELKAYLATQGVEIR 256 + +L+++LA++G+++R Sbjct: 235 SPIKLRSHLASRGLDVR 251 Score = 51.6 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 1/92 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 G E+++ + + + ++ E +P GG T E R A Sbjct: 40 YNDYGVDELIVLDIVPSAASRARVEDIIGRMSEEIFMPFTVGGGVKTAEDVNALLR-AGA 98 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D S ++ + E Q + + I Sbjct: 99 DKVSINSEAVRRPEFVREAARTFGDQCITVSI 130 >UniRef50_C9KKW7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKW7_9FIRM Length = 243 Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 107/254 (42%), Gaps = 16/254 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+R G+ V+ ++ + +AK++ +GA L D+ + GR Sbjct: 1 MIIFPAIDIRGGKCVRLLKGDFAKETVFSDKPEEMAKKWQTQGAQFLHLVDLDGALAGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + +DIP + GGI++LE ++L+ G ++ + S A+ DP L+ ++ Sbjct: 61 QNLATVKAILAAVDIPVELGGGIRTLESIDEVLALGVRRVILGSVAVRDPELVKTACAKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + G + + E +E++K G I+ ++ Sbjct: 121 GDRI-----------VVGIDAKDGIVAVDGWGVSGDVEATALAKEMKKAGVKTIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF--RDADVDGALAASVFHKQI 238 +DG G ++E K+ V ++ASGG ++ A ++G + + Sbjct: 170 RDGTLAGVNVEATAKLARESGVAVVASGGVKSIADIEALKPYEKAGIEGVIVGKSIYMGT 229 Query: 239 INIGELKAYLATQG 252 +++ E A +G Sbjct: 230 LDLAEAIEIAAKEG 243 >UniRef50_Q4JW54 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=144 Tax=Bacteria RepID=HIS4_CORJK Length = 258 Score = 147 bits (370), Expect = 4e-34, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 13/249 (5%) Query: 6 IIPCLDVRDGQVVKGVQF--RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 ++P +DV DGQ V+ VQ G + A + GA+ + D+ A+ GR + Sbjct: 12 LLPAVDVADGQAVRLVQGAAGTETSYGAPIEAALAWQNAGAEWIHLVDLDAAF-GRGSNF 70 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + V +D+ ++GGI+ E + LS G +++I + AL DP + R+G + Sbjct: 71 ELLKEVTGQLDVNVELSGGIRDDESLERALSTGCRRVNIGTAALEDPEWCESVISRYGDK 130 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + + ++ E + ++ + +G +V+ +++DG Sbjct: 131 VAIGL--------DTREVDGEWRLRGRGWTSDGGELWEVLERLDSQGVSRLVVTDVSRDG 182 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL--EAFRDADVDGALAASVFHKQIINI 241 + NG +++ L++V P++ASGG +++ A VD A+ + + Sbjct: 183 MLNGPNIDLLREVAAATDAPVVASGGISSLDDIRALAAVVHEGVDSAIVGKALYAGKFTL 242 Query: 242 GELKAYLAT 250 E Sbjct: 243 EEALEAAQG 251 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 30/101 (29%), Gaps = 2/101 (1%) Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 T + ++ Q GA I L ++ G + E LK+V V + SGG Sbjct: 32 GTETSYGAPIEAALAWQNAGAEWIHLVDLDAA-FGRGSNFELLKEVTGQLDVNVELSGGI 90 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 E A + + + + + Sbjct: 91 RDDESLERAL-STGCRRVNIGTAALEDPEWCESVISRYGDK 130 >UniRef50_A9A5X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Thaumarchaeota RepID=HIS4_NITMS Length = 236 Score = 147 bits (370), Expect = 5e-34, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 16/249 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IIP +D+ DGQVV+ + + D V +AK++ + GAD L D+ A+ G Sbjct: 1 MKIIPAIDLMDGQVVRLYKGDPKQKTVYSDDPVSVAKKWQKAGADMLHIVDLDATI-GTG 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++++ + IP VAGG+++ E + +SF ++++ I + A D ++ R+A ++ Sbjct: 60 SNLDLIEKISKELSIPVEVAGGLRNEEIIDRAISF-SNRVVIGTMAFKDKEMLQRIAKKY 118 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 IV+ +D T+ LD + E G E +L ++ Sbjct: 119 DFSKIVISVDHIDGFIVTH----------GWQESTKTPLLDAINEFVSMGFTEFLLTNVS 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G DLE L+K V + +IASGG ++ + R + + ++ I+ Sbjct: 169 KDGTLEGPDLEYLEKACAVQNANVIASGGISNIDDVSDVQRK-NAFAVILGKALYENKIS 227 Query: 241 IGELKAYLA 249 I E K + Sbjct: 228 IEEAKQLVN 236 >UniRef50_Q8DMA5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=23 Tax=Bacteria RepID=HIS4_THEEB Length = 257 Score = 146 bits (367), Expect = 9e-34, Method: Composition-based stats. Identities = 52/252 (20%), Positives = 105/252 (41%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ DG+ V+ VQ ++ D + +A + GA L D+ A+ G Sbjct: 1 MDVIPAIDLLDGKCVRLVQGNYDKVNVFHDDPLKVALYWQRLGAPRLHLVDLDAAKTGEP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ ++IP V GG++S + A + G ++ + + AL +P L+ LA + Sbjct: 61 RNYDLIGKIVASLEIPVQVGGGLRSRQAVADLFLQGVNRAILGTVALENPKLVASLAAEY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V + Y ++ D Q + G V + Sbjct: 121 PGRIWVGL-----------DARDGYVATRGWLETSKILATDLAQNMAAMGVAGFVYTDIQ 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHKQI 238 +DG G ++ L+++ V + P+IASGG ++ L F + GA+ + + Sbjct: 170 RDGTLQGPNIPALRQLLAVTNRPVIASGGVSSLNDILSLFALTPHGLVGAIVGKALYTKA 229 Query: 239 INIGELKAYLAT 250 +++ E + Sbjct: 230 MDLREAVRAVGQ 241 Score = 47.8 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 1/87 (1%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 Q+ GA + L ++ + + + K+ +P+ GG + + + F Sbjct: 38 YWQRLGAPRLHLVDLDAAKTGEPRNYDLIGKIVASLEIPVQVGGGLRSRQAVADLFLQ-G 96 Query: 225 VDGALAASVFHKQIINIGELKAYLATQ 251 V+ A+ +V + + L A + Sbjct: 97 VNRAILGTVALENPKLVASLAAEYPGR 123 >UniRef50_D1U7I5 Histidine biosynthesis protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U7I5_9DELT Length = 289 Score = 146 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 125/289 (43%), Gaps = 38/289 (13%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 + RIIP LD++ +VKG+ F ++G A+ Y E GADEL F D AS R Sbjct: 1 MKFRIIPRLDIKGPNLVKGIHFEGLRVLGKPEDFARHYYENGADELFFQDAVASLYDRNS 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V R + I IP CV GG++S++D +L GADK++IN+ A+ P LI + FG Sbjct: 61 LHDIVKRTSSEIFIPLCVGGGLRSVDDIRAVLRAGADKVAINTEAIKRPELIREASVAFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 IVV I+ A + E T ++W + + GAGE+++ ++Q Sbjct: 121 SSTIVVSIEAIRRANGEWEAL-----VEYGRETTGVNAVEWAKRACELGAGELMITSIDQ 175 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ---- 237 +G GYD+E + + VP+IA GG G+ D ASV H + Sbjct: 176 EGTGKGYDIELTRAIASAVSVPVIAGGGCGSPADAANVITQGRADAVSMASVLHYKTIES 235 Query: 238 -----------------------------IINIGELKAYLATQGVEIRI 257 +I +++ + + + R+ Sbjct: 236 LMEKSKSHEYQQEGNIEFLKTGRTFTQLTPCSIRDIQEAMQARNLPCRM 284 >UniRef50_Q6KZD5 Histidine biosynthesis protein HisF n=1 Tax=Picrophilus torridus RepID=Q6KZD5_PICTO Length = 249 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 91/257 (35%), Positives = 143/257 (55%), Gaps = 8/257 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLAKRII LDVR+G+VVKGV+F + + GD V A Y ++GADE+VF DI+A+ + R Sbjct: 1 MLAKRIIAALDVRNGRVVKGVRFMDIKDAGDPVENAVIYQDQGADEIVFLDISATDEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + V V+ ++IPF V GGI+S++ A +L G DK+ +N+ A+ +P +I ++ Sbjct: 61 IMIDLVKSVSRELNIPFTVGGGIRSVKTALNLLREGCDKVFLNTYAIENPWIIKEISRE- 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G A Y+ Y + + + +W+ + GAGEI+L ++ Sbjct: 120 ------TGSANLVIAVDAMYNNGYYVYKNAGRINSGLKLNEWLPMAEYLGAGEILLTSID 173 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG G+D + + + +P+IASGGAG EHFL+AF A S+ H +I Sbjct: 174 SDGTMKGFDNRLISEAASMIDIPVIASGGAGKPEHFLDAFMAGASGALAA-SILHFKINT 232 Query: 241 IGELKAYLATQGVEIRI 257 + ++K YL + GV +R+ Sbjct: 233 VNDIKRYLRSNGVNVRL 249 >UniRef50_A4G9I7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=209 Tax=Bacteria RepID=HIS4_HERAR Length = 265 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 109/262 (41%), Gaps = 26/262 (9%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++DG V+ Q + D +A+ + E+GA L D+ + G+ Sbjct: 1 MLLIPAIDLKDGHCVRLKQGDMDQATVFSEDPADMARHWLEQGARRLHLVDLNGAFAGKP 60 Query: 61 VDKSWVSRVAEVI----------DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 ++ V + + + +IP + GGI+ L+ + L G I I + A+ +P Sbjct: 61 KNEPAVKAILQAVREYAEKNGIEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + F Q IV + + ++++ E +D ++ + G Sbjct: 121 GFLHDACSAFPGQIIVGL-----------DAKDGKVATDGWSKLSGHEVIDLAKKFEDYG 169 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE--AFRDADVDGA 228 I+ + +DG+ G ++E K+ + +P+IASGG ++ A ++ ++G Sbjct: 170 CESIIYTDIGRDGMMGGVNIEATVKLAQSMTIPVIASGGVHNIKDVEALCAVQEEGIEGV 229 Query: 229 LAASVFHKQIINIGELKAYLAT 250 + ++ +++ + Sbjct: 230 ICGRSIYEGTLDLRSAQDRADE 251 >UniRef50_B2A6X1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6X1_NATTJ Length = 246 Score = 145 bits (366), Expect = 1e-33, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 110/257 (42%), Gaps = 19/257 (7%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFR---NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 ++ +IP +D+ +G+ V+ + + +A+ + E+GA L D+ + G Sbjct: 1 MSLELIPAIDLYEGECVRLTEGELGSKKVYSDNPSDMARHFQEQGASRLHLVDLEGAFQG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 V + + + ++A + IP V GGI+S+E ++++ G D++ + + A D + + Sbjct: 61 SVKNSTIIEKIANKVSIPVQVGGGIRSIEAIERLVNMGVDQVILGTKAYNDRDFLQSALE 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 F IV E V+ +T D++ E+ + G ++L Sbjct: 121 LFHKNIIVGV-----------DIKGGKVATEGWVNVSDTKTYDYLSELTELGVPRVILTD 169 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR-----DADVDGALAASV 233 +++DG G +LE K++ + L+ SGG ++E + ++ G + Sbjct: 170 ISKDGKLQGPNLELFKELAIFTELDLVLSGGMSSLEDINRIQKLQNEIAHNLAGVILGKA 229 Query: 234 FHKQIINIGELKAYLAT 250 ++ I++ + Sbjct: 230 LYEGKIDLQGALETIRK 246 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 1/90 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + Q++GA + L + + + ++K+ +P+ GG ++E Sbjct: 37 MARHFQEQGASRLHLVDLEGAFQGSVKNSTIIEKIANKVSIPVQVGGGIRSIEAIER-LV 95 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQ 251 + VD + + + + Sbjct: 96 NMGVDQVILGTKAYNDRDFLQSALELFHKN 125 >UniRef50_A1W0U8 Putative imidazole glycerol phosphate synthase subunit hisF2 n=17 Tax=delta/epsilon subdivisions RepID=HIS62_CAMJJ Length = 248 Score = 145 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 91/258 (35%), Positives = 135/258 (52%), Gaps = 10/258 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML RIIPC+ +++GQ+VK ++F++ IG + + Y DEL+ DI AS G Sbjct: 1 MLKTRIIPCVLLKNGQLVKSIEFKDFRTIGHLTSTMRIYNARNVDELIILDIDASKSG-E 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +D + +A+ +P + GGIK+LED KIL+ GADKISINS AL D I++ A+RF Sbjct: 60 IDFESIEDLAKECFMPLTIGGGIKTLEDIQKILNLGADKISINSKALEDMDFISKAANRF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIV ID + ++S + +K+GAGE++L ++ Sbjct: 120 GSQCIVCSIDVKRKGGQFCVYDRGNLLEKSPLELALEY--------EKKGAGELLLTSVD 171 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G GYDLE LK + +PLI +GG +EA + D A +FH Sbjct: 172 FEGRAKGYDLELLKIFQNKLKIPLIINGGLSNPSDGVEAL-NLGADALAGAYIFHFSKYT 230 Query: 241 IGELKAYLATQGVEIRIC 258 ++K LA QG +R+ Sbjct: 231 PKDVKEELARQGFAVRLL 248 >UniRef50_C1TLB3 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TLB3_9BACT Length = 239 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 18/252 (7%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M I P +D+ +VV+ + D V A +AE GA + D+ + Sbjct: 1 MKKIEIYPAIDLYSRKVVRLTGGDFEKIKEYGDDPVETALSFAEAGARWIHLIDLEGAEK 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G V + +VA +P GG+++ ED A LS GA ++ + S Sbjct: 61 GSPVHLKELEKVAASTGLPVQYGGGLRTEEDVALALSSGAKRVYLGSL------------ 108 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 F + N T VTQ + + E+ + G ++ Sbjct: 109 -LFKGSPRTLWKRFGNSIVPSVDVKNGTVALSGWTEVTQLPPEEAITELLRIGYSTFLVT 167 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +++DG +G DL+ +++++ ++A+GG + + + V GA+ ++ Sbjct: 168 SVSRDGTASGPDLKLYERLKK-TDGRILAAGGIRDKKDLAD-LAEIGVSGAVLGKSIYEG 225 Query: 238 IINIGELKAYLA 249 +++ E Sbjct: 226 TVDLREAVEEFG 237 >UniRef50_C9RH20 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Methanocaldococcus RepID=C9RH20_METVM Length = 237 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 114/247 (46%), Gaps = 16/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++D + V+ +Q + + D V +AK++ +GA+ L D+ A+ G Sbjct: 1 MIVIPAVDLKDKKCVQLIQGDPTKKHLELEDPVNVAKKWVHDGAEYLHIVDLDAAL-GCG 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ E ++IP V GGI+SL A +++ G DKI + + A+ DPT + L Sbjct: 60 NNVDVIEKIVEEVNIPVEVGGGIRSLTIAKRLMDIGVDKIVVGTKAITDPTFLNELLSEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I++ ++ K + + G I+ ++ Sbjct: 120 EREKIILAVECKQGKVAIKGWKETINKNPIEIAKKYEKK-----------VGGILFTNVD 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G+ +G + ++ + + VP+I SGG T+E + ++ VDG + S +K IIN Sbjct: 169 VEGMLSGIKTDIIETLVKNVRVPIIYSGGITTLEDIKK-LKEIGVDGVIIGSALYKGIIN 227 Query: 241 IGELKAY 247 + + Sbjct: 228 LKDALKI 234 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 36/88 (40%), Gaps = 2/88 (2%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 GA + + ++ G +++ ++K+ E ++P+ GG ++ + D V Sbjct: 39 WVHDGAEYLHIVDLDAAL-GCGNNVDVIEKIVEEVNIPVEVGGGIRSL-TIAKRLMDIGV 96 Query: 226 DGALAASVFHKQIINIGELKAYLATQGV 253 D + + + EL + + + + Sbjct: 97 DKIVVGTKAITDPTFLNELLSEIEREKI 124 >UniRef50_A7I1W6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=17 Tax=Epsilonproteobacteria RepID=HIS4_CAMHC Length = 236 Score = 144 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 100/244 (40%), Gaps = 16/244 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+++G V+ + LA+++A+ GA L D+ + G Sbjct: 1 MEILPAIDLKNGFAVRLKKGEMNSAKIYSDKPWELAEKFADLGAKWLHIVDLDGAFAGEA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ + ++ V GGI+ E + G + + S AL +P + ++A ++ Sbjct: 61 KNAKTIEKIVKSTNLKIEVGGGIRDEERIKFYKNSGVSRFILGSAALKNPEFVKQMAKKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + G N + E V+ + + + G I+ ++ Sbjct: 121 KIAV-------------GIDAKNGFVATEGWAEVSNIKACELAKIYADAGVEAIICTDIS 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ +G +++ +++ + + IASGG + + + G + +++ I+ Sbjct: 168 KDGMLSGVNVKFSEEIAKSSGIKTIASGGVKDLSDIKALKQSGKIYGVIVGKAYYEGSID 227 Query: 241 IGEL 244 + E Sbjct: 228 LKEA 231 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 10/86 (11%), Positives = 32/86 (37%), Gaps = 4/86 (4%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA + + ++ + + ++K+ + ++ + GG E + ++++ V + Sbjct: 43 GAKWLHIVDLDGAFAGEAKNAKTIEKIVKSTNLKIEVGGGIRDEERI-KFYKNSGVSRFI 101 Query: 230 AASVFHKQIINIGELKAYLATQGVEI 255 S K +K + + Sbjct: 102 LGSAALKNPEF---VKQMAKKYKIAV 124 >UniRef50_B1CBX0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBX0_9FIRM Length = 234 Score = 144 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 107/245 (43%), Gaps = 15/245 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+RD + V+ Q + + +A+ + + G L D+ A+ G++ Sbjct: 1 MIIFPAIDIRDNKCVRLSQGDYDKQTVYFDNPFTVAEDFEKRGVKYLHIVDLDAALIGKL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + ++ ++ V GGI+ E K + G D++SI + A+ D + +++++ Sbjct: 61 TNFDIIKKIITDTNMLIEVGGGIRGEEQIKKYVDIGVDRVSIGTKAVKDFAFLKEMSEKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + ++Y + + + D++ +++ IV+ + Sbjct: 121 PYKISLSL-----------DVKDEYVYIKGWSENSGILIWDYLDKIKDLPLTGIVVTDIK 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ +G E +K+++ ++ SGG +++ + ++ D G + ++ + Sbjct: 170 KDGMLSGPSFELYRKLKKATKHNIVVSGGVSSLDDINK-LKEDDTYGVIVGKALYENKFS 228 Query: 241 IGELK 245 + ++ Sbjct: 229 VEDII 233 Score = 42.4 bits (98), Expect = 0.017, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 4/92 (4%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 +KRG + + ++ + + + +KK+ ++ + GG E + D V Sbjct: 39 FEKRGVKYLHIVDLDAALIGKLTNFDIIKKIITDTNMLIEVGGGIRGEEQIKKYV-DIGV 97 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D + K LK +I + Sbjct: 98 DRVSIGTKAVKD---FAFLKEMSEKYPYKISL 126 >UniRef50_A3CTR9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Methanomicrobiales RepID=HIS4_METMJ Length = 239 Score = 144 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 14/251 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH--EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 I P +D+ DG+ V+ VQ R + GD A R+ +EGAD L ++ + Sbjct: 1 MEIYPAVDILDGRCVQLVQGRPEAATVYGDPAAWAHRWLDEGADGLHVVNLDGAFGRARK 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + + + GGI+S+EDAA L G D++ +++ A+ +P +I LA+ FG Sbjct: 61 NADLIRAFTRETETFTELGGGIRSVEDAAGWLDAGVDRVIVSTQAVREPEMIRTLAEEFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + ++ G L W + + GAG ++ ++ Sbjct: 121 GERVMAG-----------IDARAGEVMIEGWERPAGSYLSWAERFESLGAGSLLYTNVDV 169 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +G++ G +E + ++ VP++ SGG + A RDA GA+ S + + + Sbjct: 170 EGLQQGIAIEPVTELLARVKVPVVVSGGISSPGDV-AALRDAGAAGAVLGSALYAGKVRL 228 Query: 242 GELKAYLATQG 252 E Sbjct: 229 PEAMEAAHANE 239 Score = 45.9 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 1/92 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 W GA + + ++ R + + ++ GG ++E Sbjct: 34 WAHRWLDEGADGLHVVNLDGAFGRARKNADLIRAFTRETETFTELGGGIRSVEDAAGWL- 92 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGV 253 DA VD + ++ ++ I L + V Sbjct: 93 DAGVDRVIVSTQAVREPEMIRTLAEEFGGERV 124 >UniRef50_Q0AW40 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Clostridia RepID=HIS4_SYNWW Length = 244 Score = 143 bits (361), Expect = 4e-33, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 15/253 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++DGQ V+ VQ R +A+ + E+GA L D+ + G Sbjct: 1 MIIYPAIDLKDGQCVRLVQGRVENKTVYSDAPANVARSFQEQGASFLHIVDLDGAFQGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +A IDI F V GG++ L D K+L+ GA ++ I + A++ P I L D+F Sbjct: 61 QNLKAIEAIAAAIDISFQVGGGLRQLSDVEKLLALGASRVIIGTRAVSHPDFIANLLDKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + G E + +D+ +++ G + ++ Sbjct: 121 GPE----------RIVLGLDAKEGMVAVEGWVSTSSVSAIDFGLQMKALGIQTAIYTDVS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG+ G +L +K++ + +IASGG ++++ + V GA+ + Sbjct: 171 RDGLLQGPNLAAIKEMASSTGLDIIASGGVSSLDNIRALKELENDGVSGAIIGKALYDGK 230 Query: 239 INIGELKAYLATQ 251 I + + ++ Sbjct: 231 IGLVDALREAESK 243 Score = 40.5 bits (93), Expect = 0.061, Method: Composition-based stats. Identities = 8/89 (8%), Positives = 27/89 (30%), Gaps = 1/89 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 Q++GA + + ++ + +L+ ++ + + GG + + Sbjct: 39 FQEQGASFLHIVDLDGAFQGSPQNLKAIEAIAAAIDISFQVGGGLRQLSDVEKLL-ALGA 97 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVE 254 + + I L + + Sbjct: 98 SRVIIGTRAVSHPDFIANLLDKFGPERIV 126 >UniRef50_Q18DL2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Halobacteriaceae RepID=HIS4_HALWD Length = 245 Score = 143 bits (361), Expect = 5e-33, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 14/249 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +IP +D++DG VV+ VQ GD V AK++ E GA L D+ + +G + Sbjct: 8 FEVIPAVDMQDGDVVQLVQGERGTETRYGDPVVAAKQWVEAGAKTLHLVDLDGAFEGDRM 67 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + V + + +DIP + GGI++ DAA +L G +++ + + A+ +P L+ LA+ + Sbjct: 68 NATAVDAIIDAVDIPVQLGGGIRTANDAASLLDRGVNRVILGTAAVENPDLVAELAESYP 127 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + IV + T T + GA I+ ++ Sbjct: 128 GRIIVSL-----------DAADGEVVVSGWTESTGIDPAVAAARFADYGACGILFTDVDV 176 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +G G +V + +P+IASGG +++ + + ++ + Sbjct: 177 EGKLAGIQSSVTARVIDAVDIPVIASGGVASLDDIQT-LHTTGAAATVVGTALYENKFTL 235 Query: 242 GELKAYLAT 250 + + Sbjct: 236 ADAMEVCES 244 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 2/119 (1%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 RII LD DG+VV V D A R+A+ GA ++F D+ + S Sbjct: 129 RIIVSLDAADGEVV--VSGWTESTGIDPAVAAARFADYGACGILFTDVDVEGKLAGIQSS 186 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 +RV + +DIP +GG+ SL+D + + GA + + + + + Sbjct: 187 VTARVIDAVDIPVIASGGVASLDDIQTLHTTGAAATVVGTALYENKFTLADAMEVCESD 245 >UniRef50_A7FJH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=97 Tax=Gammaproteobacteria RepID=HIS4_YERP3 Length = 245 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 101/249 (40%), Gaps = 10/249 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP LD+ +G+VV+ Q + +P + Y ++GA L D+T + D Sbjct: 2 IIPALDLIEGKVVRLHQGDYGQQRDYGNHPLPRLQDYQQQGAQVLHLVDLTGAKDPAARQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + +D+P V GGI++ +D +L GA ++ + S A+ P ++ + +R+G Sbjct: 62 IPLLRELLAGVDVPVQVGGGIRNEQDVVALLEAGAARVVVGSTAVKQPEMVQQWFERYGA 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + ++ + V++ G ++ +++D Sbjct: 122 EA-----IVLALDVRINEAGCKHVAISGWQENSDATLEQIVEQYLPYGLKHVLCTDISRD 176 Query: 183 GVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G +G ++E ++V + V ASGG G ++ R + V G + N+ Sbjct: 177 GTLSGSNVELYQEVCQRYPQVAFQASGGIGCLDDIAR-LRGSGVQGVIVGRALLDGKFNV 235 Query: 242 GELKAYLAT 250 E A Sbjct: 236 KEAIACWQN 244 Score = 51.3 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 5/117 (4%) Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 + GD + R L +Q+ Q++GA + L + + L+++ VP+ Sbjct: 17 HQGDYGQQRDYGNHPLPRLQDYQQQGAQVLHLVDLTGAKDPAARQIPLLRELLAGVDVPV 76 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV----EIRI 257 GG + + A + S KQ + + + + ++RI Sbjct: 77 QVGGGIRNEQDVVALLE-AGAARVVVGSTAVKQPEMVQQWFERYGAEAIVLALDVRI 132 >UniRef50_B0T799 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Caulobacter RepID=HIS4_CAUSK Length = 241 Score = 143 bits (360), Expect = 7e-33, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 104/252 (41%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D++DGQ V+ + + A+R+ +G L D+ + +G+ Sbjct: 1 MILYPAIDLKDGQCVRLLHGDMEKATVFNNSPADQAERFVRDGFSWLHVVDLNGAIEGKS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + V + E I IP + GGI++LE + G ++ + + A+ DP L+ + A + Sbjct: 61 VNTAAVQSILESISIPVQLGGGIRTLEGVEAWIEAGVSRVILGTVAVHDPDLVRKAARLW 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q V + + T ++ + + + + G +++ ++ Sbjct: 121 PEQIAVAV-----------DVRDGKVAVDGWTGLSDLDAITLGKRFEDVGVAALIVTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV--DGALAASVFHKQI 238 +DG G ++E + ++ + +P+IASGG ++ V GA+ + Sbjct: 170 RDGALTGVNVEGVGELADAVSIPVIASGGVASVADIERLKARPGVEIAGAILGRSLYAGT 229 Query: 239 INIGELKAYLAT 250 I E A Sbjct: 230 IRPAEALTIAAA 241 Score = 50.1 bits (118), Expect = 7e-05, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 4/94 (4%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 + G + + +N + ++ + E +P+ GG T+E A V Sbjct: 39 FVRDGFSWLHVVDLNGAIEGKSVNTAAVQSILESISIPVQLGGGIRTLEGVEAWIE-AGV 97 Query: 226 DGALAASVFHKQIINIGELKAYLATQ---GVEIR 256 + +V + + Q V++R Sbjct: 98 SRVILGTVAVHDPDLVRKAARLWPEQIAVAVDVR 131 >UniRef50_A0M284 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=35 Tax=cellular organisms RepID=HIS4_GRAFK Length = 241 Score = 142 bits (359), Expect = 8e-33, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 103/252 (40%), Gaps = 15/252 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 RIIP +D+ +G+ V+ + D + +AK + G + L D+ + + Sbjct: 1 MRIIPAIDIIEGKCVRLSKGDYATKKIYNEDPLEVAKSFEAHGIEYLHLVDLDGAKSSHI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + +A + GG+K+ +D GA +I+ S A+ + + +F Sbjct: 61 VNHKILETIANKTSLKIDFGGGLKTDKDLQIAFESGASQITGGSIAVKNSDVFQNWIQKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + G ++ + E + ++Q +++G ++ ++ Sbjct: 121 GNKK----------IILGADAKDRKIAVSGWLEDSNEEIIPFIQNYEEKGVKYVICTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG+ G E K++ ++ LIASGG + + + +G + ++ I Sbjct: 171 KDGMLEGPSFELYKEILSETKNINLIASGGISEFDELPK-LAELGCEGVIIGKAIYENRI 229 Query: 240 NIGELKAYLATQ 251 ++ + + Y+ Q Sbjct: 230 SLKQFENYILNQ 241 >UniRef50_B1YL10 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YL10_EXIS2 Length = 234 Score = 142 bits (359), Expect = 8e-33, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 107/247 (43%), Gaps = 15/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++ P +D+ GQ V+ Q + GD + +A+R+ E+GA + D+ + G + Sbjct: 1 MQLYPAIDLMSGQAVRLKQGDFQQQTFFGDALTIARRFKEDGATAIHLIDLDGAKAGEPL 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 S ++ + + + GG++++E + G D+I I + AL D L+ ++ +R G Sbjct: 61 HLSLIADIKKETGLFVEAGGGVRNIETVEAYVGAGIDRILIGTVALEDEALLEQMIERAG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V + + W ++ + ++G + +++ Sbjct: 121 DKLAVAL-----------DAKDGIVQTRGWLEASDWTLERAIEHLIQKGIKTFLYTDISR 169 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG+ G D++ L ++ V LIASGG T+E ++ +DGA+ +++ Sbjct: 170 DGMMQGPDVDGLDLLKRD-GVELIASGGVTTVEDVAR-LKEIGMDGAVIGRALLDGSLSL 227 Query: 242 GELKAYL 248 E+ Sbjct: 228 KEVLRVC 234 Score = 50.1 bits (118), Expect = 6e-05, Method: Composition-based stats. Identities = 13/88 (14%), Positives = 32/88 (36%), Gaps = 2/88 (2%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA I L ++ L + +++ + + A GG +E A +D L Sbjct: 42 GATAIHLIDLDGAKAGEPLHLSLIADIKKETGLFVEAGGGVRNIETVEAYVG-AGIDRIL 100 Query: 230 AASVFHKQIINIGELKAYLATQGVEIRI 257 +V + + ++ + + + + Sbjct: 101 IGTVALEDEALLEQMIERAGDK-LAVAL 127 >UniRef50_D1B9F8 Histidine biosynthesis protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9F8_THEAS Length = 253 Score = 142 bits (359), Expect = 9e-33, Method: Composition-based stats. Identities = 90/256 (35%), Positives = 154/256 (60%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M+ KRIIP ++ ++VKG FR+H +GD V A +GA+E+V D+ A+ +GR+ Sbjct: 1 MMPKRIIPQFLLKGSRLVKGTSFRDHVDVGDPVSQAMIQDAQGAEEIVLVDVDATREGRL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 VD S +SR+ E +P V GG+ +++DA+++ GADK+ +N+ A+ +P++I LA+RF Sbjct: 61 VDTSLISRMVERCRLPIAVGGGVGNVDDASRLFVAGADKVIVNTAAVLNPSMIRPLAERF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +VV +D +++ G V S + + ++ ++ GAGE ++ ++ Sbjct: 121 GAQSVVVSLDLKRNSKRGWVPV-----VRSGEEEVDLDFVYLLEALEANGAGEFIVTSVD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++G +G+DL+ LK VREV VPLIASGGAG H +E F D++G + + + Sbjct: 176 REGTLSGFDLDMLKVVREVVKVPLIASGGAGNYLHLVELFLSIDLEGVGIGKMLALRDYD 235 Query: 241 IGELKAYLATQGVEIR 256 + +KA+L +G+ +R Sbjct: 236 VVRIKAFLKGRGIPVR 251 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 1/89 (1%) Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 +GA EIVL ++ D + ++ E C +P+ GG G ++ F A D Sbjct: 42 QGAEEIVLVDVDATREGRLVDTSLISRMVERCRLPIAVGGGVGNVDDASRLFV-AGADKV 100 Query: 229 LAASVFHKQIINIGELKAYLATQGVEIRI 257 + + I L Q V + + Sbjct: 101 IVNTAAVLNPSMIRPLAERFGAQSVVVSL 129 >UniRef50_D0RQP1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQP1_9RICK Length = 238 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 105/247 (42%), Gaps = 14/247 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++DG+ V+ + + + AK + ++G + L D+ + Sbjct: 1 MIIYPAIDLQDGKCVRLTKGDFEQQTVYSRSPIEQAKAFEDKGFEFLHVVDLDRTIHKEK 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + + + V GG+++ + +++ G + + + A+ DP L+ ++ ++ Sbjct: 61 SNLKTIKEIIQSTGLKVQVGGGLRTKDTVEEVIDLGVENAVMGTAAVNDPDLLIEISQKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V ++ + T+ D+++ ++ I+ +N Sbjct: 121 KNKISVGL-----------DVRDKMIALKGWKDQTEISCFDFLETIKNLPLKSIIFTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG++ G +++ K+ E ++P+ ASGG +++ + G + + +I+ Sbjct: 170 KDGMKQGINIDDTLKMAESSNIPVTASGGVSSIDDIKLIKSKKKISGVVVGKAIYDGLID 229 Query: 241 IGELKAY 247 + EL + Sbjct: 230 LNELVKF 236 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 39/94 (41%), Gaps = 4/94 (4%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 + +G + + +++ + +L+ +K++ + + + GG T + E D V Sbjct: 39 FEDKGFEFLHVVDLDRTIHKEKSNLKTIKEIIQSTGLKVQVGGGLRTKDTVEEVI-DLGV 97 Query: 226 DGALAASVFHKQIINIGELKAYLATQ---GVEIR 256 + A+ + + E+ + G+++R Sbjct: 98 ENAVMGTAAVNDPDLLIEISQKYKNKISVGLDVR 131 >UniRef50_B3E201 Histidine biosynthesis protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E201_GEOLS Length = 282 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 91/286 (31%), Positives = 135/286 (47%), Gaps = 33/286 (11%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M RIIP LD++ +VKG+ ++GD + A Y E GADEL++ DI AS R Sbjct: 1 MKPVRIIPRLDIKGPNLVKGIHLEGLRVLGDPIAFAHYYYENGADELIYSDIVASLYQRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + IP +AGG+++L D K L GADK+ IN+ A+ +P I + F Sbjct: 61 SILDLVTETSRSVFIPITLAGGLRTLNDIQKALRAGADKVCINTAAIENPDFIAQAVRVF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + E+ + + E + WVQ V++ GAGEI+L +N Sbjct: 121 GS-----STIVVAVEVVRNDDNSLIAYTENGRQSSGIEAVSWVQRVEELGAGEILLTSIN 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK---- 236 +G +GYD++ + +V +P+IA GGAG EH E F +DV A AS+FH Sbjct: 176 AEGTGDGYDMDLINRVVSAVSIPVIAHGGAGKPEHVREVFATSDVRAAAVASMFHYYAKK 235 Query: 237 -----QI-------------------INIGELKAYLATQGVEIRIC 258 I+I ELK YL+ G+ R+ Sbjct: 236 LSADMNPVEGNLDFLRSGKSFSRVSEISIVELKQYLSKHGIVCRLV 281 >UniRef50_A3N3W4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=92 Tax=Proteobacteria RepID=HIS4_ACTP2 Length = 250 Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 103/255 (40%), Gaps = 11/255 (4%) Query: 1 MLAK-RIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASS 56 M K IIP LD+ DG VV+ Q + + + Y +GA++L D+T + Sbjct: 1 MQKKSIIIPALDLIDGNVVRLHQGDYAKQTTYSDNPIEQFANYLAQGAEQLHLVDLTGAK 60 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + ++ + V GGI++ +D A +L+ GA+++ I S A+ D ++ Sbjct: 61 YPAKRQTALIGKIIAETNCQIQVGGGIRTEQDVADLLAVGANRVVIGSTAVKDRAMVKGW 120 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 +++G + + + + +++ Q G ++ Sbjct: 121 FEKYGAEK-----FVLALDVNIDASGQKIIAISGWQEASGVSLEELIEDYQVVGLQHVLC 175 Query: 177 NMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +++DG G ++ +++ + + +SGG G+++ +A + V G + Sbjct: 176 TDISRDGTLAGSNVNLYREICAKYPKIHFQSSGGIGSLDDI-KALKGTGVSGVIVGRALL 234 Query: 236 KQIINIGELKAYLAT 250 + N+ E Sbjct: 235 EGKFNVAEAIECWQN 249 >UniRef50_Q7UG70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodopirellula baltica RepID=HIS4_RHOBA Length = 253 Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 102/254 (40%), Gaps = 18/254 (7%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGR 59 I P +D+R G+ V+ Q + D V AKR+ E GA L D+ A+ Sbjct: 11 RMEIWPAIDLRHGKPVRLRQGDYDQQTTFGDDPVEFAKRWQESGAKRLHLVDLDAARGDS 70 Query: 60 V-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 ++ V R+ E +P + GG++ +L+ G ++ + S AL DP + D Sbjct: 71 PDANRDAVQRIIEATGLPCQMGGGVRDEITIESLLNVGVTRLVVGSRALKDPDWFVEMCD 130 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR--GAGEIVL 176 ++ + + G + + + ++ +++ R IV Sbjct: 131 KYPGKLV-----------AGIDARDGKVATQGWLETSDVSAFEFATKLRSRTENIAAIVY 179 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + +DG+ G + E L ++ +PL+ASGG T + + + + A+ + Sbjct: 180 TDIAKDGMMQGPNFEGLAEMAAASDIPLVASGGVTTYDDIKQ-LVEMKMPAAIVGRSLYD 238 Query: 237 QIINIGELKAYLAT 250 ++ +GE+ Sbjct: 239 GVMELGEVVRLAGD 252 >UniRef50_C6UMW6 Putative imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UMW6_HODCD Length = 264 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 99/255 (38%), Positives = 147/255 (57%), Gaps = 6/255 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 LA RIIPC+DV++G VVKG +F +G+ +A Y+ GADEL F D++ASS R + Sbjct: 5 LALRIIPCMDVKEGHVVKGSKFCGLVRVGEATLVANSYSVSGADELCFLDVSASSANRSI 64 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + +S+VAE IP V GG++ ++D +L GADK+SINS + P I R D+FG Sbjct: 65 LYATISQVAESCLIPLTVGGGVRRVKDVGDLLRAGADKVSINSAGVLSPEFIARCVDKFG 124 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 QC+VV ID + + R T + L++ + + GAGEI+L +++ Sbjct: 125 SQCVVVSIDCKASDGAWEVCTH------GGARPTGVDALEYACQAAQFGAGEILLTSVDR 178 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DGV+ GYDL LK V + VP+IASGG G + HF A + L AS+ H+ + + Sbjct: 179 DGVKAGYDLALLKAVSSLVSVPVIASGGGGELSHFALALIEGGASAVLTASLLHRNELTV 238 Query: 242 GELKAYLATQGVEIR 256 +LK +L + G+ +R Sbjct: 239 SQLKFFLGSCGIVVR 253 Score = 49.7 bits (117), Expect = 9e-05, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 1/88 (1%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA E+ ++ + +V E C +PL GG ++ + R A D Sbjct: 46 GADELCFLDVSASSANRSILYATISQVAESCLIPLTVGGGVRRVKDVGDLLR-AGADKVS 104 Query: 230 AASVFHKQIINIGELKAYLATQGVEIRI 257 S I +Q V + I Sbjct: 105 INSAGVLSPEFIARCVDKFGSQCVVVSI 132 >UniRef50_A1KJ21 Imidazole glycerol phosphate synthase subunit hisF n=76 Tax=Bacteria RepID=HIS6_MYCBP Length = 267 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 109/256 (42%), Positives = 145/256 (56%), Gaps = 2/256 (0%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 LA R+IPCLDV DG+VVKGV F N GD V LA Y EGADEL F D+TASS GR Sbjct: 13 LAVRVIPCLDVDDGRVVKGVNFENLRDAGDPVELAAVYDAEGADELTFLDVTASSSGRAT 72 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V R AE + IP V GG++++ D +L GADK+++N+ A+A L+ +A +FG Sbjct: 73 MLEVVRRTAEQVFIPLTVGGGVRTVADVDSLLRAGADKVAVNTAAIACLDLLADMARQFG 132 Query: 122 VQCIVVGIDTWYDAE-TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 QCIV+ +D + R T + + W G GEI+LN M+ Sbjct: 133 SQCIVLSVDARTVPVGSAPTPSGWEVTTHGGRRGTGMDAVQWAARGADLGVGEILLNSMD 192 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG + G+DL L+ VR VP+IASGGAG +EHF A A SVFH + + Sbjct: 193 ADGTKAGFDLALLRAVRAAVTVPVIASGGAGAVEHFAPAVAAGADAVLAA-SVFHFRELT 251 Query: 241 IGELKAYLATQGVEIR 256 IG++KA LA +G+ +R Sbjct: 252 IGQVKAALAAEGITVR 267 >UniRef50_UPI00016BFDF6 putative 1-(5-phosphoribosyl)-5- n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFDF6 Length = 236 Score = 141 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 104/248 (41%), Gaps = 15/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 RI P +D+++GQ+V+ + + + D + + + +EGA L D+ + G + Sbjct: 1 MRIFPAIDIKNGQIVRLTEGKYDQVKVYSKDPEEVLEHFTKEGATALHIVDLDGAKSGTI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +++ + + + + GGI+ L+ G D++ + + A+ +P + + ++ Sbjct: 61 ENQNTIKTILKNRHFVTQLGGGIRDESTINHYLNMGVDRVILGTVAVENPKFVEEMVKKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q V + ++ + +++ + + G I+ ++ Sbjct: 121 DQQIAVGV-----------DEKDGQVRANGWLVNSKVDAIEFCKMLTAMGVATIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G D+ +++ + V +IASGG ++ E + V G + ++ I Sbjct: 170 KDGMMAGCDMASYRQLCKDRKVNIIASGGVTSIAEIKE-LKRIGVAGVIVGKAIYEGKIA 228 Query: 241 IGELKAYL 248 + E A Sbjct: 229 LREATAIC 236 >UniRef50_B0K628 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=9 Tax=Thermoanaerobacter RepID=HIS4_THEPX Length = 235 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 99/248 (39%), Gaps = 16/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ + + V+ + + V +AK + E GA + D+ + G + Sbjct: 1 MVLIPAIDIMEEKCVRLTKGDFNTKEVYYENPVDVAKMWEELGAKRIHVVDLDGAKQGHL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + ++ + V GGI++ E + S G + + S A+ D Sbjct: 61 VNGNIIEQIIKSCKAEIEVGGGIRNRETIDYLFSVGVKYVILGSAAIYDK---------- 110 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + G N T+ + ++ +++++ G I+ ++ Sbjct: 111 -DLLLYSLSNYGERTIVGIDSKNGEVAVSGWLEKTKIKDMELAKKMKEIGVKTIIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG NG + + L+ + + V +IASGG ++E + ++ GA+ + IN Sbjct: 170 KDGTLNGPNFKALENILK-TGVQVIASGGISSIEDLKK-LKEMGAYGAIIGKALYIGKIN 227 Query: 241 IGELKAYL 248 + Sbjct: 228 FKSALEVI 235 >UniRef50_D2Q1W2 Bifunctional HisA/TrpF protein n=2 Tax=Actinomycetales RepID=D2Q1W2_9ACTO Length = 256 Score = 140 bits (352), Expect = 5e-32, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 17/249 (6%) Query: 6 IIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 ++P +DV DGQ V+ VQ + GD + A + E GA+ + D+ A+ GR ++ Sbjct: 18 LLPAVDVADGQAVRLVQGEAGSETSYGDPLAAATAWQEAGAEWIHLVDLDAAF-GRGSNR 76 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 ++ V +D+ ++GGI+ E L+ GA +++I + AL DP R+ +G + Sbjct: 77 ELLADVTGRLDVQVELSGGIRDDESLEAALATGARRVNIGTAALEDPEWCDRVIQTYGDR 136 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 V T + + ++ +++ G V+ + +DG Sbjct: 137 V------------AIGLDVRGRTLAARGWTKEGGDLYEVLERLERAGCERYVVTDVTKDG 184 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQIINI 241 + G +L+ + + P++ASGG +++ V+G + + + Sbjct: 185 MLQGPNLDLYRDLCARTAKPIVASGGVSSLDDLRALATLVPDGVEGVIVGKALYAGAFTL 244 Query: 242 GELKAYLAT 250 E Sbjct: 245 TEALELTRG 253 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 5/94 (5%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 Q+ GA I L ++ G + E L V V + SGG E A Sbjct: 53 WQEAGAEWIHLVDLDAA-FGRGSNRELLADVTGRLDVQVELSGGIRDDESLEAAL-ATGA 110 Query: 226 DGALAASVFHKQIINIGELKAYLATQ---GVEIR 256 + + + + G+++R Sbjct: 111 RRVNIGTAALEDPEWCDRVIQTYGDRVAIGLDVR 144 >UniRef50_B9KXJ4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=HIS4_THERP Length = 244 Score = 139 bits (350), Expect = 8e-32, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 15/244 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+R+G+ V+ + D + +A+R+A GA L D+ + G+ Sbjct: 1 MIVIPAIDLREGRCVRLFRGDFARATVYSDDPIEMAQRWASAGARWLHVVDLDGARLGQP 60 Query: 61 VDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 V + RV + + V GG+++L+ ++L GA ++ I + AL P ++ R Sbjct: 61 VQHELIERVIRAVPDVAVQVGGGVRTLDAVERLLVGGAARVVIGTAALERPDMLREALAR 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FGV+ +VV +D+ V + V V G ++ + Sbjct: 121 FGVERVVVAVDSRDGWVATH----------GWETVQAIRVEEVVHRVVLLGVRRVLATDV 170 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG +LE + ++ V +IASGG G+ R V+ A+ ++ + Sbjct: 171 TRDGTLTRPNLELMGRLA-ALGVTVIASGGVGSRSDLEALARVPGVEAAIVGRALYEGRV 229 Query: 240 NIGE 243 Sbjct: 230 RFER 233 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 34/97 (35%), Gaps = 2/97 (2%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAF 220 Q GA + + ++ + E +++ +R V V + GG T+ +E Sbjct: 35 MAQRWASAGARWLHVVDLDGARLGQPVQHELIERVIRAVPDVAVQVGGGVRTL-DAVERL 93 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + + ++ + E A + V + + Sbjct: 94 LVGGAARVVIGTAALERPDMLREALARFGVERVVVAV 130 >UniRef50_B2UX21 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Firmicutes RepID=HIS4_CLOBA Length = 237 Score = 139 bits (350), Expect = 9e-32, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 116/247 (46%), Gaps = 15/247 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+ DGQ V+ Q + DI +AK + GA+ + D+ + G Sbjct: 1 MIILPAIDIIDGQAVRLYQGDYNKKEVVANDIFNIAKEFECLGAEYIHLVDLDGAKSGYC 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V++ + ++A+ +D+P V GGI++ E K++ G ++ + + A+ D L+ + + + Sbjct: 61 VNEKIILKLAQTVDVPIEVGGGIRNFETIEKLIENGISRVILGTIAMEDEGLLKKAIECY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + V N Y ++ LD+ + ++ G I++ ++ Sbjct: 121 GEKISVGIDC-----------KNGYVYGRGWLAESKLNYLDFAKNMESLGVKSIIVTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G + + L K++++ ++ + ASGG +E+ E ++ D+ GA+ + ++ Sbjct: 170 KDGTLEGPNFDMLMKLKKLVNIDITASGGIRDIENIKE-LKNIDIYGAITGKAIYSGNLS 228 Query: 241 IGELKAY 247 + E Sbjct: 229 LKEAIDI 235 >UniRef50_A6C5Q1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Planctomycetaceae RepID=A6C5Q1_9PLAN Length = 246 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 101/257 (39%), Gaps = 21/257 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+R G+ V+ Q + D +A+R+A+ GA L D+ + G+ Sbjct: 1 MEILPAIDIRGGKCVRLRQGDYGQETVFGDDPTEMARRWADGGAQRLHLVDLDGAKAGQP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADR 119 V+ V ++ E + +P + GGI+ +L G D++ + + AL DP ++ R Sbjct: 61 VNHEVVRKIVEAVSVPCQMGGGIRDEASIQLMLDEVGIDRVIVGTQALKDPQWFKQMVQR 120 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 + + + + E V++ +D +E ++ + Sbjct: 121 YPNRLALGL-----------DARDSKVATEGWLDVSETSAIDLAKEYVGVELAAVIYTNI 169 Query: 180 NQDGVRNGYDLEQLKKV--REVCHVPLIASGGAGTMEHFLEAFR----DADVDGALAASV 233 DG+ G D ++ + +P+IASGG T++ + GA+ Sbjct: 170 ANDGMMQGVDEGTIQDMIALAELGLPVIASGGVTTLKDVSRLAEVSRTQPKLVGAIIGRA 229 Query: 234 FHKQIINIGELKAYLAT 250 ++ I + + Sbjct: 230 LYEGTIEVPAAIEAAGS 246 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 27/90 (30%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + GA + L ++ + E ++K+ E VP GG Sbjct: 35 MARRWADGGAQRLHLVDLDGAKAGQPVNHEVVRKIVEAVSVPCQMGGGIRDEASIQLMLD 94 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQ 251 + +D + + K ++ + Sbjct: 95 EVGIDRVIVGTQALKDPQWFKQMVQRYPNR 124 >UniRef50_Q2S296 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Salinibacter ruber DSM 13855 RepID=HIS4_SALRD Length = 258 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 49/248 (19%), Positives = 114/248 (45%), Gaps = 16/248 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+RDG+ V+ Q D V +AK + + A L D+ A+ + Sbjct: 4 VIPAIDIRDGRCVRLHQGDYDNETVYFEDPVKMAKLWRVQNAQTLHVVDLDAARGEGEHN 63 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + ++ + +DIP + GGI+S++ L G ++ + + A+ +P + R ++F Sbjct: 64 RDVIGKMCDALDIPIQLGGGIRSMDQIEAALDRGVYRVILGTAAVRNPDFVERAVEQFSA 123 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + +VV + + T + + + + +++++RG +V +++D Sbjct: 124 RRVVVS----------IDARDGEVRVQGWTEGSGLDAVAFAKDMEQRGVRRLVYTDISRD 173 Query: 183 GVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQII 239 G +G +++ + + R++ H + ASGG G + L+ + VD + + ++ Sbjct: 174 GTMDGPNIQAYRTLGRQLAHAKVTASGGVGEHDDLLDIQTLQPYGVDSVIVGTALYENRF 233 Query: 240 NIGELKAY 247 + A+ Sbjct: 234 PCQQFWAW 241 Score = 61.3 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 10/101 (9%), Positives = 36/101 (35%), Gaps = 1/101 (0%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + + + + + A + + ++ ++ + + K+ + +P+ GG +M+ Sbjct: 31 EDPVKMAKLWRVQNAQTLHVVDLDAARGEGEHNRDVIGKMCDALDIPIQLGGGIRSMDQI 90 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 A V + + + + + + V + I Sbjct: 91 EAALDR-GVYRVILGTAAVRNPDFVERAVEQFSARRVVVSI 130 >UniRef50_A8ESN1 Imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ESN1_ARCB4 Length = 256 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 140/260 (53%), Gaps = 14/260 (5%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+IPCL + G + K +F+ IGD + K + E+ DEL+F DI AS + R Sbjct: 2 MLQKRVIPCLLLHKGGLYKTEKFKKPTYIGDPINAIKIFNEKEVDELMFIDIDASVEDRE 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +A +P C GG+K++E KI + G +K+SI+S A+ +P LI A F Sbjct: 62 PNYKMIEDIASECFMPLCYGGGVKNIEQMKKIYALGVEKVSISSQAIINPNLIKEAARLF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q ++V ID D K + + T+ +D++++V+ GAGEIV+N + Sbjct: 122 GNQSVIVTIDIKKDFWGNKK-----IFINNGKKNTKLNPIDFIKQVESLGAGEIVINSCD 176 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF-HKQII 239 DG+ GYD+E LK+++E VP+IA GGAG + H + F + VD S+F ++ + Sbjct: 177 NDGIMKGYDIELLKEIKENTKVPIIALGGAGNLNHIKDVFESSKVDAVACGSMFVYQGPL 236 Query: 240 --------NIGELKAYLATQ 251 + +++ L + Sbjct: 237 KGVLISYPSYQKIQELLKNK 256 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 E++ ++ + + ++ + C +PL GG +E + V+ Sbjct: 45 VDELMFIDIDASVEDREPNYKMIEDIASECFMPLCYGGGVKNIEQMKK-IYALGVEKVSI 103 Query: 231 ASVFHKQIINIGELKAYLATQGVEIRI 257 +S I E Q V + I Sbjct: 104 SSQAIINPNLIKEAARLFGNQSVIVTI 130 >UniRef50_P72139 Putative imidazole glycerol phosphate synthase subunit hisF2 n=9 Tax=cellular organisms RepID=HIS62_PSEAE Length = 251 Score = 138 bits (347), Expect = 2e-31, Method: Composition-based stats. Identities = 86/234 (36%), Positives = 134/234 (57%), Gaps = 5/234 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M+ +R+IPCL ++D +VK V+F+ + +GD + + + E+ DEL+ DI AS + Sbjct: 1 MVRRRVIPCLLLKDRGLVKTVKFKEPKYVGDPINAIRIFNEKEVDELILLDIDASRLNQE 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ VA +P C GGIK+LE A KI S G +K+SIN+ AL D +LI R+AD+F Sbjct: 61 PNYELIAEVAGECFMPICYGGGIKTLEHAEKIFSLGVEKVSINTAALMDLSLIRRIADKF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +V ID G E+ TR + L+W Q +++ G GEI LN ++ Sbjct: 121 GSQSVVGSIDCRKGFWGGHS-----VFSENGTRDMKRSPLEWAQALEEAGVGEIFLNSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +DGV+ G+D ++ + HVP+IA GGAG++ ++ F V A S+F Sbjct: 176 RDGVQKGFDNALVENIASNVHVPVIACGGAGSIADLIDLFERTCVSAVAAGSLF 229 Score = 50.5 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 E++L ++ + + E + +V C +P+ GG T+EH + F V+ Sbjct: 44 VDELILLDIDASRLNQEPNYELIAEVAGECFMPICYGGGIKTLEHAEKIF-SLGVEKVSI 102 Query: 231 ASVFHKQIINIGELKAYLATQGVEIRI 257 + + I + +Q V I Sbjct: 103 NTAALMDLSLIRRIADKFGSQSVVGSI 129 >UniRef50_Q1AX07 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=HIS4_RUBXD Length = 243 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 16/248 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 + P +D++ G+ V+ Q D V A+ + GA L D+ + +GR V Sbjct: 9 VFPAIDLKGGRCVRLRQGDFGRERVYDADPVGRAREWERRGARALHVVDLDGAREGRPVQ 68 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + +A +P V GGI++LED GA ++ + + A+AD R + G Sbjct: 69 LALIREIARAAGVPLQVGGGIRTLEDVRAARRAGAARVVVGTAAVADRDFRLRALEELGA 128 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 +V R + + E+ G ++ +++D Sbjct: 129 DLVVAV-----------DAREGVVATHGWQRQSGVGAAELAGELAAEGVRAVLFTDISRD 177 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G G LE+ +V + +P IASGG R V GA+ + ++ + Sbjct: 178 GTGEGAALERTAEVAGI--IPTIASGGVRGAGDIRALARTPGVVGAVVGTALYEGQATLE 235 Query: 243 ELKAYLAT 250 EL A Sbjct: 236 ELLAAAGG 243 >UniRef50_D1BQK4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Firmicutes RepID=D1BQK4_VEIPT Length = 240 Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 15/250 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 I P +D++DG+ V+ + + D V AK+Y L D+ + G+ V+ Sbjct: 2 IFPAIDLQDGRSVRLYKGDFAQETVINPDPVDQAKQYEAAKVGALHLVDLDGAKAGKPVN 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V V + GGI+ E LS G D++ + S AL +P L ++ +G Sbjct: 62 VDIVKAVRAAFTGILEIGGGIRDKEAVDLYLSLGVDRVILGSVALKNPKLTKQVIAEYGA 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + IV+G N E + D + + + GA ++ +++D Sbjct: 122 EHIVIG----------VDGKNGKVAAEGWLDQSDVPMTDLIGAMIEGGAKYFIVTDVDRD 171 Query: 183 GVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G + E L + +E ++ASGG +E ++ V ++ ++ I + Sbjct: 172 GTMQGANEELLGNLQKEFPTARIVASGGVRNLEDI-KSLEQKGVMDSIVGKALYEGTITL 230 Query: 242 GELKAYLATQ 251 E+ Y + Sbjct: 231 EEIGEYNQQK 240 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 1/91 (1%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + + G + L ++ +++ +K VR L GG E ++ + Sbjct: 37 QYEAAKVGALHLVDLDGAKAGKPVNVDIVKAVRAAFTGILEIGGGIRDKE-AVDLYLSLG 95 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEI 255 VD + SV K ++ A + + I Sbjct: 96 VDRVILGSVALKNPKLTKQVIAEYGAEHIVI 126 >UniRef50_O29276 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Archaeoglobaceae RepID=HIS4_ARCFU Length = 238 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 98/246 (39%), Gaps = 18/246 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 R+IP +D++DG+VV+ Q + E+ + + +AK++ E GA L D++ + GR+ Sbjct: 2 FRVIPAIDLKDGKVVRLRQGKEDEVTFEATNPIEVAKQWVEIGAKVLHVIDLSGAFQGRL 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ +A++ ++ V GGI+ A ++ G D++ + +A Sbjct: 62 RHEEIIAEIAKMAEV--QVGGGIRDFRVAERLFELGVDRVIFGT-----------IAVER 108 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + V + + + + ++ Sbjct: 109 VEELREFAKKWKGRVMVAIDSKKGRVAVKGWKEVVELTPVQLAELYDDLDVSFLY-TNID 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +G+ +G + E++++V + P+ +GG ++E + G + S + + + Sbjct: 168 VEGLVSGIERERIEEVVKSLRNPVYVAGGISSIEDI-RFAKRVGAAGVVIGSALYTKKLK 226 Query: 241 IGELKA 246 E Sbjct: 227 FEEAIK 232 >UniRef50_C7PAV4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=8 Tax=Bacteria RepID=C7PAV4_CHIPD Length = 389 Score = 137 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 15/248 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+ DG+ V+ Q + + +AK + G L D+ + G VV+ Sbjct: 148 VIPAIDIIDGKCVRLTQGDYAQKKVYNEHPLEVAKAFESIGIRRLHLVDLDGAKKGAVVN 207 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + +A ++ GGIK+ +D + GA +I S A+ DP L + ++G Sbjct: 208 WKVLEAIAGKTNLVIDFGGGIKTEDDLRIVYENGAALATIGSIAVKDPALFSGWVKKYGA 267 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 I +G D + T+ D+++E K+G I + +D Sbjct: 268 DKIFLGADVKEEKIA----------VGGWLETTELSVFDFLEENVKQGVQHIFCTDIAKD 317 Query: 183 GVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G+ G + +K+ + + +ASGG TM A +A G + +++ I++ Sbjct: 318 GLLQGPSVALYEKILQRFPQIDFVASGGVSTMADVH-ALAEAGCSGVIVGKAIYEERISM 376 Query: 242 GELKAYLA 249 EL ++ Sbjct: 377 KELADFIK 384 >UniRef50_A8S9L9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9L9_9FIRM Length = 239 Score = 136 bits (343), Expect = 6e-31, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 96/251 (38%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++ P +D+R GQVV+ Q D A+ + GA L D+ + DG + Sbjct: 1 MQLFPAIDLRGGQVVRLTQGDYDRMTVYGQDPCAQARSFVAAGAKNLHVVDLDGAKDGTL 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + ++ +A+ + V GGI++ E K LS G + + S A+ D R+ ++ Sbjct: 61 SNYDTIAALAKQGGLYIEVGGGIRTEERIEKYLSLGVGRCILGSVAVTDFAFTARMLQKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + V + Y V+ + + + + + G I+ + Sbjct: 121 GDKIAVGV-----------DAKDGYVAIHGWKEVSAEPGVAFCKRLAEAGCTAIIYTDIA 169 Query: 181 QDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG G +L +++ EV V ASGG + LE + A+ + + Sbjct: 170 CDGAMQGTNLSLYRQLAAEVPGVAFTASGGISSEAELLE-LQQMGTAAAILGKSLYTGAL 228 Query: 240 NIGELKAYLAT 250 ++ + Sbjct: 229 DLARCVQLVQD 239 >UniRef50_B1H0E7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=HIS4_UNCTG Length = 244 Score = 136 bits (343), Expect = 6e-31, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 16/252 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+R G V+ Q D V +AK + +GA L D+ + G Sbjct: 1 MIIIPAVDIRQGNSVRLKQGNIDAETIYSKDPVFIAKLWKSKGAKRLHVVDLDGAFSGTN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++K+ + + +DIP V GGI++++ ++ GA + + A +P ++ + R+ Sbjct: 61 INKAIIKNICAAVDIPVEVGGGIRNMDKIKEVFDIGAAYAILGTVAFNNPEIVKKAITRY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I+V + +T E + V ++++ G EI+ ++ Sbjct: 121 GSEKIIVA----------VDAKDGKVAISGWKDITPIEASELVNKLKEIGVQEILYTDIS 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF--RDADVDGALAASVFHKQI 238 +DG+ G D LKK+ E + +IASGG T+++ ++ V A+ S + Sbjct: 171 RDGMFTGPDFAGLKKLSES-GMRIIASGGVKTIDNLVKLKKYEKDGVFAAIVGSALYTDD 229 Query: 239 INIGELKAYLAT 250 + + + Sbjct: 230 FKLEDAIEEIEG 241 Score = 56.7 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 1/92 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 + +GA + + ++ + +K + +P+ GG M+ E F D Sbjct: 39 WKSKGAKRLHVVDLDGAFSGTNINKAIIKNICAAVDIPVEVGGGIRNMDKIKEVF-DIGA 97 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 A+ +V + + ++ + + + Sbjct: 98 AYAILGTVAFNNPEIVKKAITRYGSEKIIVAV 129 >UniRef50_Q47XB4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=10 Tax=Alteromonadales RepID=HIS4_COLP3 Length = 261 Score = 136 bits (341), Expect = 9e-31, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 14/250 (5%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M+ IP +D+ G+VV+ Q + + + YAE GA + F D+ + D Sbjct: 1 MM----IPAIDLIGGEVVRLYQGDYAQKTNYQYTVQDRQQAYAESGATVMHFVDLDGAKD 56 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + V + V GG++ +D ++L+ GAD++ I S A+ P L+T+ Sbjct: 57 STKRQLKTLKTVVNHPSMIIQVGGGVRCEDDVKQLLALGADRVVIGSLAIKQPELVTQWV 116 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 +G + IV+ +D DA+ K + D + + Q G ++ Sbjct: 117 KTYGCEKIVLALDIKIDAQGNKTLPTH-----GWIEDSGVNLEDLLAQYQDAGIKHVLCT 171 Query: 178 MMNQDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 +++DG G +++ +V + + ASGG G++ +A V G + + Sbjct: 172 DISKDGTLTGTNVDLYSEVCAKYPDIDWQASGGIGSLADI-KALIPTGVSGVILGRSLLE 230 Query: 237 QIINIGELKA 246 + E A Sbjct: 231 GKFTLEEAIA 240 Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 1/98 (1%) Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 D Q + GA + ++ L+ LK V + + GG + + Sbjct: 32 QDRQQAYAESGATVMHFVDLDGAKDSTKRQLKTLKTVVNHPSMIIQVGGGVRCEDDVKQL 91 Query: 220 FRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D + S+ KQ + + + + + + Sbjct: 92 L-ALGADRVVIGSLAIKQPELVTQWVKTYGCEKIVLAL 128 >UniRef50_C0BNI2 Histidine biosynthesis protein n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BNI2_9BACT Length = 248 Score = 136 bits (341), Expect = 1e-30, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 130/257 (50%), Gaps = 11/257 (4%) Query: 1 MLAKRIIPCLDVRDGQ-VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 ML RIIP + +G +VK F+N ++G+ V A+ + G DEL+F DI A+ R Sbjct: 1 MLKNRIIP-ILTFNGLGLVKTKGFKNPRMVGNPVQTARVFNSRGVDELIFLDIYATKQSR 59 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 ++ S V V + +P + GGI++++ +L GADK+ I S AL D + + Sbjct: 60 KINLSLVKEVIKECYMPVSIGGGIQTIDQINDLLKIGADKVVIKSKALTDKKFLKEAINF 119 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FG QCI + +D + + + +T+ ++ AGE+++N + Sbjct: 120 FGSQCICISVDVLFVNNNYLIYNDLGLKISLEEFITEMSLIN---------AGELLVNSV 170 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 N DGV NG+D++ + KV ++ +P+IA+GG G EH+ F ++ ++S+FH Sbjct: 171 NNDGVMNGFDIDLINKVEQMTTIPVIAAGGGGEPEHYSTLFNKTKINAVASSSIFHFTQY 230 Query: 240 NIGELKAYLATQGVEIR 256 ++K L +R Sbjct: 231 TPLDIKNELKKFNFPVR 247 >UniRef50_B4W8G6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=B4W8G6_9CAUL Length = 243 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 100/247 (40%), Gaps = 11/247 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++DG V+ + + +A EGA+ + D+ + G Sbjct: 1 MLIYPAIDLKDGVCVRLMHGKFDQVTRYDEQPATRLSAFAAEGAEWIHVVDLDGAEAGEA 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V + + + + ID+ GG++S D AK+L G ++ + S A+ P + F Sbjct: 61 VQHALIGELTKAIDVKIQSGGGVRSANDVAKLLDTGVSRVVVGSLAVTQPNDVAAWLKGF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I + D + + + T+ + + + K +++ + Sbjct: 121 GAEHITLAFDVKIEDGVPVPAL------KGWTQSSGVDLWTALDRYPKGLFKHLLVTDVG 174 Query: 181 QDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +LE L ++ R + L ASGG +++ A + +GA+ ++ Sbjct: 175 RDGAMTGPNLELLAEIRRRRPDLVLQASGGVSSLDDI-AAVKSLGCNGAIVGRALYENRF 233 Query: 240 NIGELKA 246 + + A Sbjct: 234 TLPDAIA 240 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 27/84 (32%), Gaps = 1/84 (1%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA I + ++ + ++ + V + + GG + + D V + Sbjct: 43 GAEWIHVVDLDGAEAGEAVQHALIGELTKAIDVKIQSGGGVRSANDVAKLL-DTGVSRVV 101 Query: 230 AASVFHKQIINIGELKAYLATQGV 253 S+ Q ++ + + Sbjct: 102 VGSLAVTQPNDVAAWLKGFGAEHI 125 >UniRef50_C2BYH3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Listeria grayi DSM 20601 RepID=C2BYH3_LISGR Length = 240 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 111/246 (45%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I P +D+++G+ V+ Q + D + A ++A GA L D+ + G+ Sbjct: 1 MQIFPAIDIKNGKCVRLYQGDFAKETMMNADPIDQAAKFAAAGATFLHIVDLDGAVSGKP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + R+ + + IP V GGI+++ L GA+++ I S AL+DP + ++ Sbjct: 61 TNIALIQRLQQQVKIPIQVGGGIRTMTQVDTYLRAGAERVIIGSAALSDPDFVKAAVTKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I+ N + E +++ + + E+ K G I+ ++ Sbjct: 121 GDKIIIGI-----------DAKNGFVATEGWLQLSDKKATTFAGEIAKLGVNTIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G + E+L+ +++ + +IASGG + + GA+A ++ I Sbjct: 170 KDGTLAGPNFEELRAIQKSARIAVIASGGVSSKADLEQ-LAAEGFYGAIAGKALYEGKIT 228 Query: 241 IGELKA 246 + ++ Sbjct: 229 MADVLE 234 Score = 51.3 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 8/78 (10%), Positives = 26/78 (33%), Gaps = 1/78 (1%) Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + + ++ ++ ++++++ +P+ GG TM R A + + S Sbjct: 47 LHIVDLDGAVSGKPTNIALIQRLQQQVKIPIQVGGGIRTMTQVDTYLR-AGAERVIIGSA 105 Query: 234 FHKQIINIGELKAYLATQ 251 + + Sbjct: 106 ALSDPDFVKAAVTKYGDK 123 >UniRef50_Q88UE2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Lactobacillus RepID=HIS4_LACPL Length = 241 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 16/247 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + I P +D+R GQ V+ Q + I D V A++ G +L D+ + G Sbjct: 1 MQM-IFPAIDLRAGQSVRLYQGDFKQATLINPDPVVQAQQINAAGLQQLHMVDLDGAKSG 59 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R + + ++ + + + GGI++ E A + L G D++ + S AL DP L+ RL Sbjct: 60 RPENFATITAIRQAFTGTIELGGGIRTYELATRYLELGIDRLILGSVALTDPRLVKRLLS 119 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 FG + IV+G N Y + +Q + ++ + GA ++ Sbjct: 120 EFGGERIVIG----------LDGTNGYVAIKGWLEQSQTKMSTLMKTMTTSGAKHFIVTD 169 Query: 179 MNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + +DG G +L +++ +V LIASGG + + + + + Sbjct: 170 VARDGTMQGPNLALYQELQAQVPTANLIASGGVRNLTDVQ-VLQASGFKDVIIGKALAEG 228 Query: 238 IINIGEL 244 + + EL Sbjct: 229 GVTLAEL 235 Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 27/86 (31%), Gaps = 1/86 (1%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 G ++ + ++ + + +R+ + GG T E +D + Sbjct: 44 GLQQLHMVDLDGAKSGRPENFATITAIRQAFTGTIELGGGIRTYELATRYLE-LGIDRLI 102 Query: 230 AASVFHKQIINIGELKAYLATQGVEI 255 SV + L + + + I Sbjct: 103 LGSVALTDPRLVKRLLSEFGGERIVI 128 >UniRef50_B8IPH4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=142 Tax=cellular organisms RepID=HIS4_METNO Length = 253 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 49/261 (18%), Positives = 98/261 (37%), Gaps = 16/261 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M + P +D+++G+ V+ VQ + D A +AE+G L D+ + Sbjct: 1 MTRVILFPAIDLKEGRCVRLVQGDMAQAIVFSDDPAAQAASFAEQGFSWLHVVDLDGAFA 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G ++ + V + + IP + GGI+ + L+ G ++ I + A+ DP + A Sbjct: 61 GAPMNAAAVDAILAAVTIPVQLGGGIREMRTVEGWLAKGVSRVIIGTAAVRDPAFVREAA 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 F + G + E + + + + + G ++ Sbjct: 121 RLFPGRI-----------AVGIDAKDGRVAVEGWAKTSTVTAEELGRRFEDAGVAALIYT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV--DGALAASVFH 235 + +DGV G ++ + + +P+IASGG ++E GA+ + Sbjct: 170 DIARDGVLKGLNIPMTLALAQAVSIPVIASGGLASIEDVHRILEPDCALLAGAITGRALY 229 Query: 236 KQIINIGELKAYLATQGVEIR 256 I+ E A + R Sbjct: 230 DGRIDPREALAAIRRAEEARR 250 >UniRef50_B4SDB6 Histidine biosynthesis protein n=9 Tax=Bacteria RepID=B4SDB6_PELPB Length = 256 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 131/256 (51%), Gaps = 5/256 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M R+I LD++ ++KG+ +IG A RY ++G DEL++ D AS R Sbjct: 1 MRNIRLIARLDIKGPNLIKGIHLEGLRVIGSPNEYALRYYQQGVDELIYMDCVASLYDRN 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + A+ I +P V GGI+S+EDA +IL GADK+++N+ A+A+P LI ++ RF Sbjct: 61 HLGDIIRSAAKDIFVPMTVGGGIRSVEDATQILRSGADKVAVNTAAVANPKLINEISRRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+ I+ + ++ T + + WV++ GAGE++L ++ Sbjct: 121 GSQCMVLSIEAKEVGKDRWE-----VYTDNGRERTGLDVIAWVKKGVAMGAGEVLLTSVD 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++G R G+D +K V +P+IASGG G E + D A + H Sbjct: 176 REGTRKGFDTALVKAVTAEVSIPVIASGGMGKPEDLVGVVSVGGADAVAMADILHYNRAG 235 Query: 241 IGELKAYLATQGVEIR 256 IGE++ G+ +R Sbjct: 236 IGEIRNVAKETGMGVR 251 >UniRef50_C0QWR6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=12 Tax=Bacteria RepID=HIS4_BRAHW Length = 238 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 110/250 (44%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+++G+VV+ V+ D + + + E G+ L D+ +SDG Sbjct: 1 MYILPAIDLKNGEVVRLVEGNYDNKTTYFKDPLEVLDFFIESGSSYLHVVDLDGASDGET 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + +V + D+ V GGI++ + K L G + + + A+ + + +++ Sbjct: 61 INFKTIEKVIKKCDLFVEVGGGIRNEDTIKKYLDIGVKRTILGTAAVENIDFTNNMINKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 ++ + + + +++++ ++ G I+ ++ Sbjct: 121 KEHI-----------AVSIDSRDRMIAVKGWKEINKQDSVEFCMKLDSMGIDTIIYTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G +L+ K++RE +IASGG + ++ RD ++GA+ ++ I+ Sbjct: 170 KDGKLSGTNLDIYKELREKISCNIIASGGVTFEDEIIK-LRDMKINGAIVGKAIYEGKID 228 Query: 241 IGELKAYLAT 250 + ++ Sbjct: 229 LKKIIEIAKQ 238 >UniRef50_B0R4B2 Imidazole glycerol phosphate synthase subunit hisF n=24 Tax=cellular organisms RepID=HIS6_HALS3 Length = 273 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 101/268 (37%), Positives = 135/268 (50%), Gaps = 14/268 (5%) Query: 2 LAKRIIPCLDVR-----DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS 56 L KR+IPC+DV + V GV F GD V +AKRY E GADE VF DITAS+ Sbjct: 3 LTKRVIPCIDVDLDDDGEPAVYTGVNFEELAYTGDPVEMAKRYNEAGADEFVFLDITASA 62 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +GR VS VA+ + IP V GGI+ +D + L GADK+SINS A+ADP+L+ R Sbjct: 63 EGRETMLDTVSAVADEVFIPLTVGGGIRDTDDIRETLRAGADKVSINSGAIADPSLVDRG 122 Query: 117 ADRFGVQC--------IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 A FG QC + + T + ++WVQE Q+ Sbjct: 123 AKAFGSQCIVISVDARRRFDEQGQHYTQVDGESCWFECTVHGGREGTGMDAIEWVQEAQR 182 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 RGAGE+ +N ++ DG ++GYD+ V + P+IAS G G +A+ Sbjct: 183 RGAGELFVNSIDADGTQDGYDVPLTAAVCDAVSTPVIASSGCGAPGDMADAYDAGADAAL 242 Query: 229 LAASVFHKQIINIGELKAYLATQGVEIR 256 A S+FH +I E K LA G IR Sbjct: 243 AA-SIFHFDEYSIAETKETLADAGYPIR 269 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 29/96 (30%), Gaps = 1/96 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + + GA E V + L+ + V + +PL GG + E R Sbjct: 41 MAKRYNEAGADEFVFLDITASAEGRETMLDTVSAVADEVFIPLTVGGGIRDTDDIRETLR 100 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 A D S + +Q + I + Sbjct: 101 -AGADKVSINSGAIADPSLVDRGAKAFGSQCIVISV 135 >UniRef50_C4G189 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G189_ABIDE Length = 238 Score = 133 bits (335), Expect = 5e-30, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 110/250 (44%), Gaps = 15/250 (6%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSD 57 M A I P +D+ +G+VV+ ++ ++ ++V A G + L D+ + + Sbjct: 1 MAAMIIFPAIDIYEGKVVRLLKGDYNKMTIYSENVVDKACEIEAAGGEWLHLVDLEGAKE 60 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G + ++V + + + + GGI++ K ++ G ++I + + A D + ++ Sbjct: 61 GNTPNFTYVEEICKKTGLKVEIGGGIRTEATIEKYINAGVNRIILGTKAATDKEFLNKMT 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 D++ + G ++ + VT D+V E+++ G I++ Sbjct: 121 DKYREKI-----------AVGIDVKDEKVAIKGWLEVTDKTIFDFVTELKEIGIKNIIVT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + +DG +G ++ +K+ + + + ASGG T++ + ++ + GA+ + Sbjct: 170 DIAKDGAMSGINVSFYEKLSKFTDMDITASGGVTTLDDLIR-LKNTGIYGAILGKAMYTG 228 Query: 238 IINIGELKAY 247 +++ E Sbjct: 229 NVDLREALKI 238 >UniRef50_B8FJR2 Histidine biosynthesis protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJR2_DESAA Length = 262 Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats. Identities = 95/265 (35%), Positives = 136/265 (51%), Gaps = 13/265 (4%) Query: 1 MLAKRIIPCLDVRD---GQV-----VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI 52 ML KR+IP L +R G+ V V F IGD V AK Y + ADELVF D+ Sbjct: 1 MLKKRLIPKLQMRAASFGKTKRMVLVTTVGFGPSTEIGDPVSQAKIYQAQAADELVFLDL 60 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 AS + R +++ AE I +P V GG++S+ED ++L+ GADK+SIN+ A+ P L Sbjct: 61 DASIEHRDALTDIIAKAAEEIFMPITVGGGVRSVEDCRRLLNHGADKVSINTGAMEIPEL 120 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 I + +D FG QCIVV ID T + + W E Q RGAG Sbjct: 121 INQGSDMFGAQCIVVSIDYKKHPNGAYE-----VFTRGGKSSTGLDPVAWAVEAQHRGAG 175 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 EI+L +++DG R G +LE KV +P+I SGG G HF++ F A + Sbjct: 176 EILLTSIDRDGTRKGLNLELTAKVAGAVDIPVITSGGCGLASHFVDGFLVGKAHAVSAGT 235 Query: 233 VFHKQIINIGELKAYLATQGVEIRI 257 F + N + ++ ++ G+ IR+ Sbjct: 236 YFCFKDENPMQTRSRISNAGIPIRL 260 >UniRef50_A6LDI6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=24 Tax=Bacteroidetes RepID=HIS4_PARD8 Length = 239 Score = 133 bits (334), Expect = 6e-30, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 103/248 (41%), Gaps = 15/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ DG+ V+ Q D + +AK + G L D+ + +GR+ Sbjct: 2 IELIPAIDIIDGKCVRLTQGDYATKKVYNEDPLEVAKMFEGNGIRRLHVVDLDGAREGRI 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + R+A + GG+K +D GA ++ S A+ +P + T +F Sbjct: 62 INYRILERIATRTSLIIDFGGGLKQEDDLEIAFESGAQMVTGGSIAVKNPEMFTSWISKF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + G + T E + +++ +G +++ + Sbjct: 122 GSEK----------IILGADAKEKKIAISGWEETTSQELVPFIKGYYDKGITKVICTDIA 171 Query: 181 QDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG+ G ++ K++R+ + +IASGG ++E + +A + + ++ I Sbjct: 172 RDGMLQGPAIDLYKEIRDEIPFLYIIASGGVSSIEDIEK-LSEAGIPAVIFGKAIYEGKI 230 Query: 240 NIGELKAY 247 + +L + Sbjct: 231 QLKDLLRF 238 >UniRef50_D0MJ01 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJ01_RHOM4 Length = 266 Score = 133 bits (334), Expect = 7e-30, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 102/255 (40%), Gaps = 17/255 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+R G+ V+ Q D V +A + + A L D+ A+ G+ + Sbjct: 4 VIPAIDIRGGRCVRLYQGSYERETVYFDDPVKMACLWRVQNARVLHVVDLDAA-RGQGHN 62 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + + +DIP V GG+++LED +L G ++ + + A+ +P L++ R+ Sbjct: 63 REVIGAICRTVDIPIQVGGGVRTLEDIEALLQVGVYRVVLGTAAVREPELVSEAIARY-- 120 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 G + + T T + ++ ++++RG V +++D Sbjct: 121 --------GCSRVVVGIDARDGEVRVQGWTEGTGVDAVELALDMERRGVRRFVYTDISRD 172 Query: 183 GVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQII 239 G G ++E + + + + ASGG + VD + ++ Sbjct: 173 GTLEGPNVEMYRTLGLHLKKARITASGGVSGYRDLMRLQELEPYRVDSVIIGRALYENRF 232 Query: 240 NIGELKAYLATQGVE 254 + + + V+ Sbjct: 233 PCQQFWCWHDKENVD 247 >UniRef50_C5BRY3 Imidazoleglycerol phosphate synthase, cyclase subunit n=2 Tax=Bacteria RepID=C5BRY3_TERTT Length = 259 Score = 133 bits (334), Expect = 7e-30, Method: Composition-based stats. Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 5/252 (1%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 R I LDV+ Q++K + ++GD AKRY E+GADEL++ D+ AS GR K Sbjct: 10 RFIARLDVKGDQLIKAIHLEGLRVVGDPQIYAKRYYEQGADELLYIDLVASLYGRNKLKD 69 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 VSR A+ I IP V GGI+S+ED ++L+ GADK++IN+ A+A+P LI ++A RFG QC Sbjct: 70 IVSRTAQDIFIPLTVGGGIRSVEDVTELLAAGADKVAINTAAVANPALIEQVALRFGSQC 129 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 +V+ I+ E + + + W +E +RGAGEI+L ++Q+G Sbjct: 130 MVLSIEAKRLGEDRWEVYTDCA-----RESSGRDVIAWAKEAVERGAGEILLTSIDQEGT 184 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 R G+D V E VP+IASGG G EH + A H + I L Sbjct: 185 RKGFDTALTAAVAETVRVPVIASGGYGQPEHINAITHQGSANAIAFADALHFERETIASL 244 Query: 245 KAYLATQGVEIR 256 K+Y A G+ +R Sbjct: 245 KSYGAEAGLRVR 256 >UniRef50_A8ZUC6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Proteobacteria RepID=HIS4_DESOH Length = 251 Score = 132 bits (333), Expect = 9e-30, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 99/248 (39%), Gaps = 16/248 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ +Q D +A+R+AE GA+ + D+ + + Sbjct: 1 MMVIPAVDIKGGKCVRLLQGDMNAETVFSDDPGAMAERWAEAGAELIHVVDLDGAIEKSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +S + + +P V GGI+ ++ G +I I S A+ P L+T F Sbjct: 61 RNLKAISALIRRVGVPVQVGGGIREIDTVKMYADLGVARIVIGSAAVNHPDLVTAACREF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + G + E T T D + G I ++ Sbjct: 121 PGRI-----------VLGIDARDGRVATEGWTSTTDIAAADLAARFEGCGVAAINFTDIH 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF--RDADVDGALAASVFHKQI 238 +DG+R G ++ ++ +P++ASGG T++ ++ V G + + Sbjct: 170 RDGMRTGPNIPAIEAFARATAIPVVASGGVSTIDDIQALLGIQEFGVTGVITGRALYDGT 229 Query: 239 INIGELKA 246 +++ E A Sbjct: 230 LDLAEAIA 237 >UniRef50_Q7V958 Putative imidazole glycerol phosphate synthase subunit hisF2 n=1 Tax=Prochlorococcus marinus str. MIT 9313 RepID=HIS62_PROMM Length = 261 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 14/265 (5%) Query: 1 MLAKRIIPCLDV--------RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI 52 ML KR+IP L +V QF + IGD V AK Y + ADELV D+ Sbjct: 1 MLKKRLIPKLQFSIKPSYRGPKPVLVITRQFDSKRAIGDPVSQAKIYEAQLADELVLVDL 60 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 +SD + +S ++E + P V GGI S E ++L GADK+ +NS A+ +P L Sbjct: 61 EGTSDSWPILLDTLSNMSESLATPLSVGGGITSFEQVQQLLDRGADKVVLNSGAVNNPQL 120 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 I +A+ +G QC+V+ ID + ++++ + + T W W + RGAG Sbjct: 121 IDLVANSYGSQCVVISIDIRKE-----SDLSRHVYIDGGSTATDWSLFSWANDCASRGAG 175 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 E+++ ++ DG G DL+ ++++R ++PLIASGG G +HF+ + A + Sbjct: 176 ELLITSIDNDGTGTGLDLDSIRQLRYEVNLPLIASGGCGLAQHFVAGYEV-GASAVAAGT 234 Query: 233 VFHKQIINIGELKAYLATQGVEIRI 257 F ++ N + ++++ G+ IR+ Sbjct: 235 FFSQRDQNPMQCRSHIRNAGLPIRL 259 >UniRef50_C7H029 Imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H029_9FIRM Length = 250 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 99/254 (38%), Positives = 148/254 (58%), Gaps = 6/254 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 + K I+PC+D+R G+VVKG++F + + D V LAK Y GAD LVFYDI AS + + + Sbjct: 1 MKKLIMPCMDIRHGKVVKGIKFEGVKDVADPVELAKYYDATGADILVFYDIAASVEDKQI 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + V V D+P GG+K++ED I+ GAD +SIN+ A+ +P L+ A++ G Sbjct: 61 YEGLFKSVRAVSDLPLVAGGGLKTIEDVDNIIKLGADMVSINTGAIDNPDLLNEAAEKIG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + + K + + + T + L+W+ E RGAG +VLN ++ Sbjct: 121 SE------NVILSVDAKKVNGEYHVFRNAGMMDTGLDALEWISEGYDRGAGILVLNSIDT 174 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DGV+ GYD+E LK EV ++ASGGAG M+ F EA V+ ALAASVFH + I I Sbjct: 175 DGVKAGYDIEMLKAAGEVTDAKIVASGGAGKMQDFKEALMLPKVEVALAASVFHYKEIVI 234 Query: 242 GELKAYLATQGVEI 255 +LK YL +G+++ Sbjct: 235 DDLKEYLRKEGIDV 248 >UniRef50_A7H5V3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=16 Tax=Campylobacter RepID=HIS4_CAMJD Length = 244 Score = 132 bits (332), Expect = 1e-29, Method: Composition-based stats. Identities = 51/251 (20%), Positives = 101/251 (40%), Gaps = 13/251 (5%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +IIP LD+ DG+VV+ V+ + + + K Y + GA EL D+T + D Sbjct: 3 QIIPALDLIDGEVVRLVKGDYKQKKVYKYNPLKKFKEYEKAGAKELHLVDLTGAKDPSKR 62 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + ++A+ + + V GGI+S E+ +L G ++ I S A+ D TL + +FG Sbjct: 63 QLVLIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKKFG 122 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + A + + + + ++ + +G I+ +++ Sbjct: 123 SEA-------IVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISK 175 Query: 182 DGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG G ++ K + E + + ASGG +++ G + + + Sbjct: 176 DGTMQGVNVRLYKLIHEIFPKICIQASGGVASLKDLENLKGI--CSGVIVGKALLDGVFS 233 Query: 241 IGELKAYLATQ 251 + E L Sbjct: 234 VEEGIRCLQNA 244 Score = 50.1 bits (118), Expect = 7e-05, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 1/92 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 +K GA E+ L + + L ++K+ + V L GG + E D V Sbjct: 40 YEKAGAKELHLVDLTGAKDPSKRQLVLIEKLAKEVSVNLQVGGGIRSKEEVKALL-DCGV 98 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + S+ K E+ ++ + + + Sbjct: 99 KRVVIGSMAIKDATLCLEILKKFGSEAIVLAL 130 >UniRef50_A1ZT22 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZT22_9SPHI Length = 239 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 98/238 (41%), Gaps = 15/238 (6%) Query: 14 DGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVA 70 +GQ V+ Q + D + +A++YA+EG L D+ + G + V ++A Sbjct: 12 NGQCVRLTQGDYSQKRVYDKDPIEMAQKYADEGFQRLHVVDLDGAKSGAPKHLALVEQMA 71 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 ++ GGIK+ E +L GA +I S A+ P + FG I++ D Sbjct: 72 AKTNLTIDYGGGIKTTEQVQAVLDAGAAMANIGSLAVKQPEVFKGWLQTFGSDKILLASD 131 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 + ++ D++ + G + +++DG+ G L Sbjct: 132 VKGEKIAINA----------WQDESEVSIYDFIADFIPSGLTQFFCTDVSKDGLLQGVAL 181 Query: 191 EQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 E K++ + + +IASGG +M+ + +DG + ++ I + ELK + Sbjct: 182 ELYCKLKQKFPTMTIIASGGVASMQDIED-LNKEGIDGVIVGKAIYENRIALEELKQF 238 Score = 44.7 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 28/92 (30%), Gaps = 1/92 (1%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 Q+ G + + ++ L ++++ ++ + GG T E Sbjct: 36 MAQKYADEGFQRLHVVDLDGAKSGAPKHLALVEQMAAKTNLTIDYGGGIKTTEQVQAVL- 94 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGV 253 DA A S+ KQ + + Sbjct: 95 DAGAAMANIGSLAVKQPEVFKGWLQTFGSDKI 126 >UniRef50_Q12NS9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=Gammaproteobacteria RepID=HIS4_SHEDO Length = 250 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 96/245 (39%), Gaps = 5/245 (2%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP +D+ DGQVV+ Q + + K Y ++GA L D+T + D Sbjct: 2 IIPAIDLIDGQVVRLYQGDYDKQTTFDLSPLAQLKSYQDQGAKLLHIVDLTGAKDPNQRQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 +S + +D+ V GGI+S + ++L+ G ++ I S A+ +P L+ +++G Sbjct: 62 IKLISELVAGLDVDIQVGGGIRSEQQVTELLAIGVKRVVIGSLAVKEPELVKSWLNKYGS 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 I + +D +A K + ++ ++ +++D Sbjct: 122 DAICLALDVNINANGEKIVAVSGWQSAGGKTLESLVAEFERPGSKQTALKHALVTDISRD 181 Query: 183 GVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G + ++ + ASGG T++ A +D+ G + + Sbjct: 182 GTLTGANTALYTELAAAYPTILWQASGGIATLDDVS-AVKDSKAAGIIIGKALLINQFTV 240 Query: 242 GELKA 246 E Sbjct: 241 EEAIQ 245 >UniRef50_B9K9S2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=HIS4_THENN Length = 248 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 101/261 (38%), Gaps = 21/261 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ +VV+ V+ + D + L ++ EEG + D++ + + Sbjct: 1 MLVIPAIDLYRKKVVRMVKGKKENTIFYEKDPIELVEKLVEEGFSLIHVVDLSRAIEESD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +++ D + GGI+ LE A K+L G + ++S L DP+ + +L + Sbjct: 61 ENLPVLEKLSSYAD-HIQIGGGIRILEYAKKLLGMGFRRQIVSSKVLEDPSFLKKLKE-- 117 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + + + V +++ G EIV + Sbjct: 118 ----------IGVNPVFSLDTREGKVAFKGWLDEKDIDPVFLVNRLKEFGLEEIVHTEIE 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR-----DADVDGALAASVFH 235 +DG +D +++ V +IA+GG + EA + + G + F Sbjct: 168 KDGTLKEHDFSLTERIALETGVKVIAAGGISSERSLEEALEVHRRTNGLLKGVIVGRAFL 227 Query: 236 KQIINIGELKAYLATQGVEIR 256 + + + +K Y + + Sbjct: 228 EGTLTVEVMKRYACQENNSVS 248 >UniRef50_Q5NMD5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Zymomonas mobilis RepID=HIS4_ZYMMO Length = 250 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 94/253 (37%), Gaps = 16/253 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 I P +D+++G VV+ + D A+++ E GA L D+ + G + Sbjct: 6 IIFPAIDLKEGHVVRLSEGDMDRATIYDDDPAARARQFYEAGARYLHVVDLDGAFAGHAM 65 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + V + + + GGI+ + LS G ++ I + A +P L+ A ++ Sbjct: 66 NAAAVDAIVKAFPGTIELGGGIRDMNAIDGWLSRGISRVVIGTAAFENPDLVKEAAQKYP 125 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 Q +V + + ++ D + G ++ + + Sbjct: 126 GQIVVAV-----------DARDGMVTTKGWAEQSEISVTDMAERFADAGVVALLYTDVGR 174 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA--DVDGALAASVFHKQII 239 DG++ G + E + +P+IASGG + R ++G + + + Sbjct: 175 DGLKKGCNSEATLALAAATDIPVIASGGVKDIGDIELLARHTKDGIEGVICGRAIYDGSL 234 Query: 240 NIGELKAYLATQG 252 ++ A G Sbjct: 235 DLKAALAIARQGG 247 >UniRef50_Q039B4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Lactobacillales RepID=HIS4_LACC3 Length = 238 Score = 131 bits (329), Expect = 3e-29, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 106/247 (42%), Gaps = 14/247 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++ P +D+ +G+ V+ Q ++ D + A+R + G L D+ + R + Sbjct: 1 MKLYPAIDLLNGKSVRLTQGDYDQVSLTEDPLYQAQRLTDAGFAHLHLVDLDGARAQRPI 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +++ ++R+ E + GGI++L L+ G D++ + S A++DP L+ + RFG Sbjct: 61 NRTVITRIREQTSAFIELGGGIRTLAAMEIYLTIGIDRLILGSAAVSDPDLVEQAIARFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 I VGIDT +Q + +Q+RG ++ + + Sbjct: 121 SNRIAVGIDTRAGKVA----------TNGWLTTSQQTANALLTAMQQRGVTTFIVTDIAK 170 Query: 182 DGVRNGYDLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG+ G + + L +++ +IASGG + + A + A+ + I Sbjct: 171 DGMMQGPNAQLLADLQQAMPQATIIASGGISLLADLHR-LQTAGIQAAIIGKAWQTGAIE 229 Query: 241 IGELKAY 247 + LK Sbjct: 230 LAMLKQM 236 Score = 51.3 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 1/99 (1%) Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 + L Q + G + L ++ + + + ++RE + GG T+ Sbjct: 29 EDPLYQAQRLTDAGFAHLHLVDLDGARAQRPINRTVITRIREQTSAFIELGGGIRTLA-A 87 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +E + +D + S + + A + + + Sbjct: 88 MEIYLTIGIDRLILGSAAVSDPDLVEQAIARFGSNRIAV 126 >UniRef50_Q7N8D1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2 n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=HIS42_PHOLL Length = 258 Score = 130 bits (326), Expect = 5e-29, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 99/256 (38%), Gaps = 20/256 (7%) Query: 3 AKRIIPCLDVRDGQV------VKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDIT 53 I P +D+ DG ++ + + +G +A + GA + D+ Sbjct: 6 TFEIFPSVDIVDGIAMTSNSAIRLTRGESSTLRRPLGTPAEVALAWQNAGAKWIHVVDLD 65 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A+ GR + ++ V +DI V GGI+ K+L+ G ++++ + AL +P Sbjct: 66 AA-SGRGSNSHLIADVLAAVDINVQVCGGIRDETILRKVLATGCQRVNLGTAALENPDWC 124 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + +G + + K Y V++ D ++ + K+G Sbjct: 125 AQAIAEYGDKIAIAL--------DVKSTSEGYQLATHGWNVSKGNLWDLLERLDKQGCQR 176 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAA 231 V+ + + G+ + + L++V P+IA GG +++ V+GA+ Sbjct: 177 YVVTDVERGGMMSSPNFTLLQEVCAKTSSPVIAGGGVSSLDDLRALADLSTIGVEGAILG 236 Query: 232 SVFHKQIINIGELKAY 247 H + + + A Sbjct: 237 QALHIGKVPLEDALAA 252 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 3/92 (3%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 Q GA I + ++ G + + V + + GG E L Sbjct: 51 WQNAGAKWIHVVDLDAAS-GRGSNSHLIADVLAAVDINVQVCGGIRD-ETILRKVLATGC 108 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + + + A + + I + Sbjct: 109 QRVNLGTAALENPDWCAQAIAEYGDK-IAIAL 139 >UniRef50_A7H8C3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Bacteria RepID=HIS4_ANADF Length = 238 Score = 130 bits (326), Expect = 5e-29, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 15/241 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D+ G+ V+ + A+ +A GA L D+ + G Sbjct: 1 MLVIPAIDLMGGEAVRLEKGDFATKTVYARHPAEKAEEFARAGATLLHVVDLDGAKAGWP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ V + EV I + GG++SL D K+L+ G + + + A+ L+ + RF Sbjct: 61 VNLDAVRAICEVPGIEVELGGGLRSLPDIEKVLALGVRYVVLGTAAVERLGLVEQACQRF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q G N T +D ++V+ G G + + Sbjct: 121 PGQV-----------RAGIDARNGEVKIAGWLEGTGLAAVDVARKVKGAGVGLVEYTDVA 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G D +++ +P++ASGG +++ R A + G + +++ I+ Sbjct: 170 RDGMFTGVDAAGAARIQAEAGIPVVASGGVASLDDVTAC-RAAGLAGVIVGKALYERRID 228 Query: 241 I 241 + Sbjct: 229 L 229 >UniRef50_Q5WX95 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Legionella pneumophila RepID=HIS4_LEGPL Length = 239 Score = 129 bits (325), Expect = 6e-29, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 100/246 (40%), Gaps = 12/246 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ Q R ++ + A +A+ GA L D+ + G++ Sbjct: 1 MLVIPAIDLQSGRCVRLKQGRFDQVTQFSVFPIERALHFAKLGAKRLHVVDLDGARSGKM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + I GGI+S+E A + + G ++ I S A+ +P L ++ ++ Sbjct: 61 QQLELICSM-QKTGIAIQAGGGIRSIEQALECSNAGISQLVIGSLAITNPDLTIQIIEKI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + IV+ +D D + + + + V + G I+ + Sbjct: 120 KPENIVLALDVRVDTKVPLLAI------NGWQNNSTSSLWEVVSYYENHGIKHILCTDIA 173 Query: 181 QDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG+ NG + + ++ E + ASGG M+ + + + ++ + Sbjct: 174 CDGMMNGPNFDLYQQAVEYFPQIAWQASGGIRHMQDITT-LGSLGISAVILGLMLYQDNV 232 Query: 240 NIGELK 245 N EL Sbjct: 233 NFEELL 238 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 35/93 (37%), Gaps = 2/93 (2%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 K GA + + ++ LE + + + + + A GG ++E LE +A Sbjct: 38 HFAKLGAKRLHVVDLDGARSGKMQQLELICSM-QKTGIAIQAGGGIRSIEQALEC-SNAG 95 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + + S+ ++ + + + + + Sbjct: 96 ISQLVIGSLAITNPDLTIQIIEKIKPENIVLAL 128 >UniRef50_Q67KH9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Bacteria RepID=HIS4_SYMTH Length = 249 Score = 129 bits (325), Expect = 7e-29, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 100/257 (38%), Gaps = 20/257 (7%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + + P +D++DGQVV+ Q R E D V +A R+AE GA + D+ + G Sbjct: 1 MRLDLYPAIDLKDGQVVRLRQGRMDEATVYGVDPVRIAARWAEAGARWIHVVDLDGALRG 60 Query: 59 RVVDKSWVSRVAEVI-----DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 R + + V + E + + + GG+++LE L+ G + I + AL Sbjct: 61 RPQNAAAVRAIVEALRQRHPGVRVQLGGGLRTLEALEAALALGVSRAIIGTSALEGDVAA 120 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 +A + + VT+ +D +++ G Sbjct: 121 RAVARFGPDRVA-----------VSIDARGGFVAARGWVEVTRVRAVDLAVRMREVGVRT 169 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 +V + DG+ G + +L+ + + +IASGG ++E V GA+ Sbjct: 170 VVYTDIATDGMLTGPNFAELEMMGR-TGLDVIASGGISSLEDIRRLTEIPGVAGAIIGRA 228 Query: 234 FHKQIINIGELKAYLAT 250 + +++ E + Sbjct: 229 LYTGAVDLAEALSLCGE 245 >UniRef50_Q7MPK7 Putative imidazole glycerol phosphate synthase subunit hisF3 n=18 Tax=cellular organisms RepID=HIS63_VIBVY Length = 260 Score = 129 bits (325), Expect = 8e-29, Method: Composition-based stats. Identities = 76/237 (32%), Positives = 126/237 (53%), Gaps = 4/237 (1%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IP L +R+ +VK V+F+ + +GD + K + E+ ADEL DI AS G Sbjct: 6 MLRSRVIPVLLMREKGLVKTVKFKEGKYVGDPLNAVKIFNEQEADELTLLDIDASRLGHE 65 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + R+A +P C GGIK++E A +IL G +K+S++S +P ++ + Sbjct: 66 PDYVLIERIASECRMPLCYGGGIKTVEQAERILKLGVEKVSLSSAVFENP----KIITQL 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I D + + + T+ +T+++V+++Q GAGEIVLN ++ Sbjct: 122 AERVGRQSIVVCLDVKKRLFGSKFDCFTINGTKKQSVDTIEFVKQIQTLGAGEIVLNFID 181 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 DGV GYDL+ + K + + VPL GGAG ++ + + + GA A S+F + Sbjct: 182 NDGVMKGYDLDAVSKFKALVKVPLTVVGGAGCVDDIAKLVQQEKLVGAAAGSLFVFK 238 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 1/85 (1%) Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 A E+ L ++ + + D ++++ C +PL GG T+E + V+ Sbjct: 49 ADELTLLDIDASRLGHEPDYVLIERIASECRMPLCYGGGIKTVEQAERILK-LGVEKVSL 107 Query: 231 ASVFHKQIINIGELKAYLATQGVEI 255 +S + I +L + Q + + Sbjct: 108 SSAVFENPKIITQLAERVGRQSIVV 132 >UniRef50_D1Y7T0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y7T0_9BACT Length = 237 Score = 129 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 95/246 (38%), Gaps = 15/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+ GQ V+ + +A +A +GA +L D+ + +G Sbjct: 1 MLIYPAIDLYAGQAVRLQRGDYARMTVYSDRPETVAADFAAQGARQLHLIDLEGAKNGGT 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + + V GGI+S++ L G D++ + + A R R+ Sbjct: 61 PNLETIVAVKKSSGLFCQVGGGIRSMDAIVAYLDAGVDRVILGTAAATQAHFAARAVARY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + V + + + T + + ++ + +Q G ++ ++ Sbjct: 121 GARIAVGV-----------DIKDGFAAVKGWTEKSPLKAFEFCRRMQSDGVSTLICTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG+ G ++ K + + +IASGG +++ + GA+ + + I+ Sbjct: 170 RDGMMQGTNVALYKTLSTELKMRIIASGGVSSLDDVRR-LAALGLYGAIIGKACYTKAIS 228 Query: 241 IGELKA 246 I Sbjct: 229 IAAAIE 234 >UniRef50_B6YWA8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=7 Tax=cellular organisms RepID=HIS4_THEON Length = 229 Score = 129 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 95/248 (38%), Gaps = 22/248 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI--IGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 RI P +D+ G+ V+ + + ++ GD V +A R+ E D++ D+ + G+ Sbjct: 1 MRIYPAIDLMGGKAVRLYRGQKEKVKVYGDPVEIASRFTEL-VDKIHVVDLDGAFTGKPQ 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + V + E + V GG +S E AK GA+ + I + F Sbjct: 60 NLDVVKEIIEETGLKVQVGGGFRSYESIAKAYEIGAENVIIGT-------------KAFD 106 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 ++ + D + + + + + + +++ + + + Sbjct: 107 LEFLEKITDNFDGITVSLDARGGKIAVKGWLEESSLKVGEAYEMLREY-VDRFIYTSIER 165 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG G E +++ + I +GG +++ L+ R GA+ ++ +++ Sbjct: 166 DGTLTGI--ESIERFWK--DEEFIYAGGVSSVDDVLK-LRRVGFSGAIVGKALYESEVSL 220 Query: 242 GELKAYLA 249 EL L Sbjct: 221 KELLEVLE 228 >UniRef50_C8WPG6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Coriobacteriaceae RepID=C8WPG6_EGGLE Length = 257 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 94/250 (37%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++P +D+ G+ V+ + D A+ + E+GA L D+ + G Sbjct: 1 MYLLPAIDILGGKAVRLAKGDYDRVTVYHDDPAAQAQLFEEQGATWLHVVDLDGARSGIP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V R+ + V GG++SL+ A++ G ++ + + +ADP ++ Sbjct: 61 ENIAIVERIMRKTLLKVEVGGGVRSLDTIARLADAGVSRVVLGTSLVADPDFAEAAIAQY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G G + +++ G +V + Sbjct: 121 GKLL-----------CAGIDAKGGEVAVAGWREGAGVAAEELARDMSALGFRHLVYTDIA 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD-VDGALAASVFHKQII 239 +DG++ G + ++ E P+IASGG ++ + A ++G +A ++ + Sbjct: 170 RDGMQTGIEAAAYVRMAEAFGHPVIASGGVAGVDDIVRLGEVAGSIEGVIAGRAVYEGAL 229 Query: 240 NIGELKAYLA 249 ++ E Sbjct: 230 SVQEGVRACD 239 >UniRef50_C7TCJ1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Lactobacillus rhamnosus RepID=C7TCJ1_LACRG Length = 249 Score = 128 bits (322), Expect = 2e-28, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 102/247 (41%), Gaps = 14/247 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 ++ P +D+ GQ V+ Q ++ D + K G L D+ + + + Sbjct: 1 MQLYPAIDLLAGQSVRLTQGDYRQVSLTADPLTQVKNLTATGLKHLHLVDLDGARSQQPI 60 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +++ +S + + + GGI++L L+ G D++ + S A+ +P L+T+ +FG Sbjct: 61 NQAVISTIRQHTPAFIELGGGIRTLAIMDHYLNAGIDRLILGSVAVTNPELVTQAVQKFG 120 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 I VG + + +Q + +RG ++ + + Sbjct: 121 ADKIAVG----------IDARAGKVATDGWLTTSTQSPTHLMQAMVRRGVTTFIVTDIGR 170 Query: 182 DGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG+ G ++ L + + V +V ++ASGG T+ A + A + A+ + Sbjct: 171 DGMMKGPNVALLAMLHQTVPNVNIVASGGVHTLADLT-ALQTAGIQAAVIGKAWQTGSFP 229 Query: 241 IGELKAY 247 + +LK Sbjct: 230 LNKLKEL 236 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 10/91 (10%), Positives = 31/91 (34%), Gaps = 1/91 (1%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + G + L ++ + + + +R+ + GG T+ ++ + +A Sbjct: 37 NLTATGLKHLHLVDLDGARSQQPINQAVISTIRQHTPAFIELGGGIRTLA-IMDHYLNAG 95 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEI 255 +D + SV + + + + Sbjct: 96 IDRLILGSVAVTNPELVTQAVQKFGADKIAV 126 >UniRef50_A3HVE8 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVE8_9SPHI Length = 244 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 106/252 (42%), Gaps = 13/252 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP + + +G+ V+ + I + + +A+ + G L D+ + G Sbjct: 2 FEVIPSIWLINGKCVRLKRGDFATEEAISNNPLEIAQGFESIGIKRLHLVDLDGARRGEP 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + +A ++ GG+ + D K FGA ++I+S A P ++ + Sbjct: 62 KNYHILEAIAGYTNLHVDFTGGVTTDGDVIKSFEFGAKTVTISSAAANYPERFSQFILSY 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + I + ++ + T+ + D ++ RG + + + Sbjct: 122 GREKINLA--------ADTNPADRKIKIRGWLKKTEIDLYDHIEFFYDRGLKYLKCSDVT 173 Query: 181 QDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DGV G + E V++ ++ + ASGG ++E F E + V+ A+ +++ ++ Sbjct: 174 RDGVMVGPNFELYADLVKKFPNLNIAASGGVRSIEDFKE-LKKLGVNAAVFGRAYYEGML 232 Query: 240 NIGELKAYLATQ 251 + +L +++ + Sbjct: 233 KLEDLADFISEK 244 >UniRef50_A2C1S3 Imidazole glycerol-phosphate synthase n=1 Tax=Prochlorococcus marinus str. NATL1A RepID=A2C1S3_PROM1 Length = 248 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 71/247 (28%), Positives = 130/247 (52%), Gaps = 6/247 (2%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 RII LDV++ V+KG+ +GD LA Y ++G +E+VF D AS R Sbjct: 1 MRIIGRLDVKNNHVIKGIHLEGLRKVGDPQELAVEYYKQGIEEIVFMDAVASLYNRNNLF 60 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + E + +P + GG++SL+D +K L+ GADK+ IN+ + L +A ++G Q Sbjct: 61 HIIQKACEKVFVPIALGGGLRSLDDVSKALNAGADKVVINTALVNRIDLAKEIAQKYGSQ 120 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 C+V I+ + ++ + +V ++ T+ +DW ++++ G GEI+L ++Q+G Sbjct: 121 CLVGSIEAKRENDSWRVYV------DNGREPTKHNVVDWAIKLKEAGVGEILLTSIDQEG 174 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 G+D+E +K++ E P+IASGG G +H + + + A H + + Sbjct: 175 TSKGFDIELIKQINESIRCPIIASGGYGNKKHLADLLKIVEPSAIAIAGSLHYKKDTVSS 234 Query: 244 LKAYLAT 250 +K + + Sbjct: 235 IKQEINS 241 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 1/86 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 K+G EIV ++K E VP+ GG +++ +A +A Sbjct: 36 YYKQGIEEIVFMDAVASLYNRNNLFHIIQKACEKVFVPIALGGGLRSLDDVSKAL-NAGA 94 Query: 226 DGALAASVFHKQIINIGELKAYLATQ 251 D + + +I E+ +Q Sbjct: 95 DKVVINTALVNRIDLAKEIAQKYGSQ 120 >UniRef50_Q3ICF4 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Alteromonadales RepID=HIS4_PSEHT Length = 242 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 96/245 (39%), Gaps = 11/245 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPL---AKRYAEEGADELVFYDITASSDGRVVD 62 IIP LDV Q+V+ Q + + L K YA+ GA +L D+ + D Sbjct: 2 IIPALDVLQNQIVRLYQGKYETVQFYPFELGARLKEYADSGAGKLHLVDLEGARDPSKKQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + +++P+ V GGI+ +D + L GA+++ I S A+ + ++FG Sbjct: 62 WQHIQAATKALNVPYQVGGGIRCEQDVSDWLKAGANQVVIGSMAVEKREQVKAWIEQFGA 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + + K +++ L+ V G + + +++D Sbjct: 122 E------HFVIALDVNKTATGWAPATHGWLTESEFGLLELVDFYANLGVIDFLCTDISKD 175 Query: 183 GVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G + ++ + + ASGG +++ + ++ + G + ++ Sbjct: 176 GTMTGPSFALYEDLIKHNSTIKVQASGGVSSLDDIKK-LKELGIGGIILGKSLLDGAFSV 234 Query: 242 GELKA 246 E A Sbjct: 235 EEALA 239 Score = 46.6 bits (109), Expect = 8e-04, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 31/92 (33%), Gaps = 1/92 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 GAG++ L + + + ++ + +VP GG + + + A Sbjct: 38 YADSGAGKLHLVDLEGARDPSKKQWQHIQAATKALNVPYQVGGGIRCEQDVSDWLK-AGA 96 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + + S+ ++ + + I + Sbjct: 97 NQVVIGSMAVEKREQVKAWIEQFGAEHFVIAL 128 >UniRef50_A6T0B3 Imidazoleglycerol phosphate synthase n=4 Tax=Proteobacteria RepID=A6T0B3_JANMA Length = 253 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 124/234 (52%), Gaps = 5/234 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 MLA R++PCL + G +VK VQF+ IGD V + + ++ DEL+ DITA+++ R Sbjct: 1 MLAIRVMPCLLMDQGALVKTVQFKKPTYIGDPVNAVRIFNQKEVDELLLIDITATTEKRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +D + ++ +P C GG+ +L D ++ G +KIS+++ A+ +P L+ A F Sbjct: 61 IDFETLEKLVTECFMPICYGGGVDNLVDMRRLYHLGIEKISLSAAAITNPELVREAAAEF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q IVV +D + T+ ++ +E+++ GAGEI+L ++ Sbjct: 121 GNQAIVVTLDVKKNLFGKHTVRTHQ-----GKTDTKRSPVEVAREMEQAGAGEILLYSID 175 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 +DG +G+DL+ ++ V +P+IA GGAG + H A +A S+ Sbjct: 176 KDGTWSGFDLDLIQNVTRAVGIPVIACGGAGELAHLRSAVNEAGASAVAIGSMA 229 Score = 53.2 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 1/87 (1%) Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 E++L + + G D E L+K+ C +P+ GG + ++ Sbjct: 44 VDELLLIDITATTEKRGIDFETLEKLVTECFMPICYGGGVDNLVDMRR-LYHLGIEKISL 102 Query: 231 ASVFHKQIINIGELKAYLATQGVEIRI 257 ++ + E A Q + + + Sbjct: 103 SAAAITNPELVREAAAEFGNQAIVVTL 129 >UniRef50_D0CY30 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 2 n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CY30_9RHOB Length = 282 Score = 127 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 101/256 (39%), Gaps = 15/256 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 R+ P +++++G+ V + R E + D V A+ +A GA+ + D + +GR Sbjct: 36 MRVYPTMELQNGRCVTLDKGRLDEPMIWHVDPVETAQGWAAAGAEWMHLTDFD-AIEGRD 94 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V ++ ++P +AGG +S E + + GA +I I + A DP L LA + Sbjct: 95 TNSALVEQIIRSAELPVQLAGGFRSREQVERWIDKGAGRIVIGTLAARDPHLFKELAKLY 154 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q ++ Y + + + +++ I++ ++ Sbjct: 155 PDQIVLAVDVW-----------QGYVMTDGWRTQSAFSPEAFIEAFADAPLAAILVTDID 203 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 D V L + + P+IASG + + ++ G L ++ ++ Sbjct: 204 SDMVDVEAQLGLISGLAAHSRTPVIASGVVRSSDDISRLAYIPNISGVLVGRALFRKTVD 263 Query: 241 IGELKAYLATQGVEIR 256 + E A T + Sbjct: 264 LSEALAVARTAHEPVA 279 >UniRef50_Q1IWD2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Deinococcus RepID=HIS4_DEIGD Length = 243 Score = 127 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 99/239 (41%), Gaps = 15/239 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 L IIPC+D++ G+ V+ + + A+ +A GA + D+ A+ G Sbjct: 8 LQPLIIPCVDIQSGRAVRLYEGDPDRETVYFESPLEAARHWAALGAGLVHLVDLDAA-TG 66 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 R +++ ++++ + +P V GGI+ A +L G ++ I + A+ +P L+ L Sbjct: 67 RGENRAVITQITAELGVPVEVGGGIRDRAAAEALLDAGVGRVVIGTAAVKNPALVRELIA 126 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 G +VV +D + + + + G ++ Sbjct: 127 AHGPSRVVVSLDARGLDVAIH----------GWAEGSGVSVAELAPLLAEAGLETLIFTD 176 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + +DG G D + +++VR++ LI GG T++ + + GA+ ++ Sbjct: 177 VTRDGTLRGLDRDLMRQVRQLWSNTLIVGGGVATLDDV-RLLAEEGIQGAIVGRAIYEG 234 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 2/93 (2%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 GAG + L ++ G + + ++ VP+ GG EA DA Sbjct: 47 HWAALGAGLVHLVDLDAAT-GRGENRAVITQITAELGVPVEVGGGIRDRA-AAEALLDAG 104 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 V + + K + EL A V + + Sbjct: 105 VGRVVIGTAAVKNPALVRELIAAHGPSRVVVSL 137 >UniRef50_A7FU80 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=104 Tax=Bacteria RepID=HIS4_CLOB1 Length = 242 Score = 127 bits (318), Expect = 5e-28, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 117/250 (46%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I+P +D+++G+ ++ Q + D + +A ++ E GA+ + D+ + G + Sbjct: 1 MIILPAIDLKEGKCIRLYQGDFKASKVVAEDPIEVALKFKENGAEYIHIVDLDGALTGEI 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + S +S + + I+IP + GGI++L ++ G +++ + + AL + L+ ++ Sbjct: 61 KNLSIISSIIKTINIPVELGGGIRNLNTIDMLIGAGIERVILGTAALNNRGLVEEAVKKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + N+ V+ +D+ +E++K G I+ ++ Sbjct: 121 DEKIAIGI-----------DAKNEKVAINGWLNVSSINYIDFAKEMEKIGVRNIIFTDIS 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG G +L+QL+K+ E + +IASGG +E + ++ DV GA+ + IN Sbjct: 170 KDGTLKGPNLKQLEKLNESINCNVIASGGIKDIEDL-KGIKEMDVYGAIVGKAIYSGNIN 228 Query: 241 IGELKAYLAT 250 + E + Sbjct: 229 LNEAIKIINK 238 Score = 39.7 bits (91), Expect = 0.092, Method: Composition-based stats. Identities = 9/83 (10%), Positives = 27/83 (32%), Gaps = 1/83 (1%) Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 GA I + ++ +L + + + ++P+ GG + + A ++ Sbjct: 42 NGAEYIHIVDLDGALTGEIKNLSIISSIIKTINIPVELGGGIRNLNTI-DMLIGAGIERV 100 Query: 229 LAASVFHKQIINIGELKAYLATQ 251 + + + E + Sbjct: 101 ILGTAALNNRGLVEEAVKKYDEK 123 >UniRef50_Q1GHT0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1 n=15 Tax=Rhodobacterales RepID=HIS41_SILST Length = 247 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 91/256 (35%), Gaps = 15/256 (5%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +++ DG+ V + + D V AK +AE GA+ + D + G Sbjct: 1 MMIYPTMELLDGRCVTLDKGNLDAPMIWHVDPVETAKGFAEAGAEWMHLTDFN-ALQGDS 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ V + +P + GGI+S E A + G ++ I + A DP + LA + Sbjct: 60 SNQDLVEELIRTAGLPIQLGGGIRSREQAEFWIEKGVGRVVIGTMAAYDPAAVAELAKYY 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 Q ++ T E + W +V+ I++ ++ Sbjct: 120 PDQVVLAVDVWQGQVMT-----------EGWRKSGAWTPEAFVKAFGNAPFAGILVTDID 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 D L + + E H P+IASG + + ++ GAL + I Sbjct: 169 SDMSDLDAQLGLISGLAEQAHSPVIASGVVRSKDDISRLKYLPNISGALVGRALFNKTIT 228 Query: 241 IGELKAYLATQGVEIR 256 + E + Sbjct: 229 LEEAMETAQPNPEPVA 244 >UniRef50_C1CY68 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Deinococci RepID=C1CY68_DEIDV Length = 251 Score = 126 bits (317), Expect = 6e-28, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 101/244 (41%), Gaps = 15/244 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIPC+D++ G+ V+ + + A+ + E GA + D+ A+ GR + Sbjct: 19 IIPCVDIQSGRAVRLYEGDPERETVYFDSPLDAARHWVERGAGLVHLVDLDAA-TGRGEN 77 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + ++ + +P V GGI+ E A +L G ++ I + A+ +P L+ L G Sbjct: 78 REVIRQITSELGVPVEVGGGIRDREAAEDLLRAGVHRVVIGTAAVRNPQLVADLIAAHGP 137 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + +VV +D + + + + G ++ + +D Sbjct: 138 ERVVVSLDARGLEVATH----------GWAQGSGVNVAELTPGLADAGLELLIFTDVTRD 187 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G G + E +++VR++ LI GG M+ ++ ++GA+ ++ + Sbjct: 188 GTLKGLNRELMRQVRQLWINTLIVGGGVANMDDV-RLLQEERIEGAIVGRAIYEGTLAYP 246 Query: 243 ELKA 246 + Sbjct: 247 VILE 250 Score = 60.9 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 +RGAG + L ++ G + E ++++ VP+ GG E + R A Sbjct: 54 HWVERGAGLVHLVDLDAAT-GRGENREVIRQITSELGVPVEVGGGIRDREAAEDLLR-AG 111 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 V + + + + +L A + V + + Sbjct: 112 VHRVVIGTAAVRNPQLVADLIAAHGPERVVVSL 144 >UniRef50_D1B860 Histidine biosynthesis protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B860_THEAS Length = 232 Score = 126 bits (317), Expect = 7e-28, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 90/247 (36%), Gaps = 18/247 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D+ G+VV+ R +A +A+ G D+ + GR Sbjct: 1 MEIYPAVDLYGGKVVRLTGGRFQDATVYPTSPGEMALLFAQAGVRWAHVVDLEGAKTGRP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V + A + GGI+S++ LS GA ++ + S + F Sbjct: 61 VHLWALEAFAGA-GLKVQFGGGIRSIQSVRDALSAGATRVMMGSALFDRSVDVVEAHRLF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + + + T+ T ++ + + G ++ + Sbjct: 120 GPAILPAVDHRGWR-----------VSVKGWTQGTDIPVDRALENLSRVGFSLFLVTDGD 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G DLE +K+ + IA+GG G + H R+A GA+ ++ I+ Sbjct: 169 RDGTLSGPDLEGYRKICARYGI--IAAGGIGELGHL-RGLRNAGAAGAVLGKALYEGAIS 225 Query: 241 IGELKAY 247 I E Sbjct: 226 IEEAMRL 232 >UniRef50_P59520 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=HIS4_BUCBP Length = 241 Score = 126 bits (316), Expect = 7e-28, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 95/245 (38%), Gaps = 10/245 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP +D+ +G +V+ Q +I +A +Y +GA + D+ + Sbjct: 2 IIPSIDLIEGNIVRLYQGNYDTKTFYQNNIYDIALKYYNQGAKIVHLVDLDGALCPNNKQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 S + + + V GGI+S +D +L GA ++ I S A+ + T + + FG Sbjct: 62 TSLIKNLLNYFNFHIQVGGGIRSYKDVETLLLNGAKRVVIGSSAINNITEVEKWLLEFGY 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + IV+ +D + K V + ++ G ++ + +D Sbjct: 122 KSIVLALDVYVRNNGYKEVV-----INGWKNRSNVSLESVLERFSTLGIKYVLCTDVKKD 176 Query: 183 GVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G G + K + + +V SGG GT+ + A + + + + + ++ Sbjct: 177 GTCLGPNFTLYKNISKLFKNVCFQLSGGIGTISDVISA-KKSGIKDIIIGRALLENKFSL 235 Query: 242 GELKA 246 E Sbjct: 236 LEAIR 240 >UniRef50_C5E2I9 KLTH0H05368p n=17 Tax=cellular organisms RepID=C5E2I9_LACTC Length = 550 Score = 126 bits (316), Expect = 7e-28, Method: Composition-based stats. Identities = 86/314 (27%), Positives = 132/314 (42%), Gaps = 58/314 (18%) Query: 2 LAKRIIPCLDVR---DGQVVKGVQ----------FRNHEIIGDIVPLAKRYAEEGADELV 48 L +RII CLDVR G +V N +G V LA++Y E+GADE+ Sbjct: 234 LTRRIIACLDVRTNDQGDLVVTKGDQYDVREKQEGGNVRNLGKPVELAQKYYEQGADEVT 293 Query: 49 FYDITASSDGRVVD---KSWVSRVAEVIDIPFCVAGGIKSLED-----------AAKILS 94 F +IT+ D + D + + A+ + +P V GGIK + D AA + Sbjct: 294 FLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTHIPALQVAALYFA 353 Query: 95 FGADKISINSPALADPTLITRLADRF-------------------------------GVQ 123 GADK+SI S A+ L +R Sbjct: 354 SGADKVSIGSDAVYAAEKYYELGERGDGASPIETISKSYGAQAVVISVDPKRVYVDGPES 413 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 +T + E G+ + + + + GAGE++LN +++DG Sbjct: 414 VKHKTFETKFPNEKGQTWCWYQCTIKGGRESRDMGVWELTRACEALGAGEVLLNCIDKDG 473 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +GYDLE + +E +P+IAS GAG +HF EAF D L A +FH+ + + Sbjct: 474 SNSGYDLELINHAKEAVKIPVIASSGAGEPKHFKEAFESTGADACLGAGMFHRGEYTVND 533 Query: 244 LKAYLATQGVEIRI 257 +K YL G ++R+ Sbjct: 534 VKQYLLDSGFKVRM 547 >UniRef50_C4L175 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L175_EXISA Length = 237 Score = 126 bits (316), Expect = 8e-28, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 16/246 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN--HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 R++P +D+ G++V+ + E GD L K + + D+ + G Sbjct: 1 MRLLPAIDLIGGKIVRLTEGDFSTEEQYGDPYELLKAWQ-GKVPMIHLIDLEGAKAGEPR 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 V + GGI+S ++ GAD++ + + A DP + + +++G Sbjct: 60 HLDVVRYAKS-LGFLVQTGGGIRSEASLDAVMETGADRVLLGTKAFTDPDFLDKAIEKYG 118 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V + T+ + + Q++ KRG I+ + Sbjct: 119 KRVAVAL-----------DAYDGKVAINGWQEATKLDDISVAQDLVKRGIETILYTDIGS 167 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 DG NG ++ ++K +R++ +V LIASGG T E E + A +D A+ ++I Sbjct: 168 DGKLNGPNVTRMKALRQIVNVTLIASGGVTTEEDVKE-LKMAKIDEAVVGKALLSGKVSI 226 Query: 242 GELKAY 247 EL + Sbjct: 227 EELIEW 232 Score = 41.6 bits (96), Expect = 0.023, Method: Composition-based stats. Identities = 8/92 (8%), Positives = 22/92 (23%), Gaps = 3/92 (3%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 + I L + L+ ++ + + GG + Sbjct: 37 AWQGKVPMIHLIDLEGAKAGEPRHLDVVRY-AKSLGFLVQTGGGIRSEASLDAVME-TGA 94 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D L + + + + V + + Sbjct: 95 DRVLLGTKAFTDPDFLDKAIEKYGKR-VAVAL 125 >UniRef50_C6UMW5 Putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UMW5_HODCD Length = 241 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 96/250 (38%), Gaps = 16/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 R + +DV++G+ V+ + + + +++ + D + D+ + G Sbjct: 1 MRFLASIDVKNGECVRLCRGQMADCRVYASSPLEAVRKFNLQCCDLVHIVDLDGAVCGSP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + A + V GG+++L DA L GA K+ + + A+AD + ++ + Sbjct: 61 QNWRSILEAARQLKGCVQVGGGVRTLADAKLYLEGGASKVVLGTSAIADMEFVCHVSWLY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + V T + T V+ V +++ ++ +N Sbjct: 121 PGRVCVGVDTFGELVAT-----------DGWTAVSCVRCDQLVPKLEAARVSCLIWTDIN 169 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGALAASVFHKQI 238 +DG G + + L +V VP+I SGG T ++ + G + +++ Sbjct: 170 RDGTLQGVNFDALDRVLAASAVPVIVSGGVATALDLIKLHNLYADKLAGVICGKALYERT 229 Query: 239 INIGELKAYL 248 + ++ L Sbjct: 230 LTARFARSIL 239 >UniRef50_B2I5X7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=21 Tax=Bacteria RepID=HIS4_XYLF2 Length = 269 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 96/250 (38%), Gaps = 10/250 (4%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + + P LD+R+G VV+ Q ++P A+ +A+ GA + D+ A+ G Sbjct: 1 MNFIVYPALDIRNGAVVRLQQGDYARQTRYDDQVLPRAQAFADSGATWMHLVDLDAAKAG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + ++ + GG++S +D A+IL GA ++ I S A+ T + Sbjct: 61 GYTLAPLLRQITRATGLQVQTGGGVRSRDDVARILDAGAARVVIGSLAVRQMTCVIE--- 117 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 +Q T T V + Q+ G ++ Sbjct: 118 --WLQAFGPERITVALDTRQDAGGVWRLPVHGWTEVAEATLEALAQQYAAAGLRHLLCTD 175 Query: 179 MNQDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + +DG+ +G +++ +R + V + SGGA + + A + A G + + Sbjct: 176 IARDGMLSGPNMDVYAYLRALVPAVQIQVSGGARDVADVVAA-KMAGCAGIVLGKALLEG 234 Query: 238 IINIGELKAY 247 + + E + Sbjct: 235 RLALKEAVQH 244 Score = 43.2 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 11/88 (12%), Positives = 30/88 (34%), Gaps = 1/88 (1%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA + L ++ L+++ + + GG + + DA + Sbjct: 45 GATWMHLVDLDAAKAGGYTLAPLLRQITRATGLQVQTGGGVRSRDDVARIL-DAGAARVV 103 Query: 230 AASVFHKQIINIGELKAYLATQGVEIRI 257 S+ +Q+ + E + + + + Sbjct: 104 IGSLAVRQMTCVIEWLQAFGPERITVAL 131 >UniRef50_Q7MPP3 Putative imidazole glycerol phosphate synthase subunit hisF2 n=1 Tax=Vibrio vulnificus YJ016 RepID=HIS62_VIBVY Length = 272 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 6/257 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IPC+ + VV+ F+N+ IG++ + DE++ DI AS + R Sbjct: 4 MLKIRLIPCIVTKGELVVQSFAFKNYLPIGNVKTAIDFFVNWDVDEIIVNDIDASKEFRE 63 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + VS A+ +P V GGIK+LE +L GADK++IN+ A+ DP I A F Sbjct: 64 PNVDLVSWAAKECFVPLTVGGGIKTLEHIRNLLKAGADKVTINTKAIDDPDFIKNAASVF 123 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCI V +D K + + + +DWV++V+ GAGEI+LN ++ Sbjct: 124 GSQCITVSVDAIKQGNVYKLYDYRDGRVL------DVDVVDWVRKVESYGAGEILLNSVD 177 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG R GYD+E LK V + +P+IA GG G + E + AA++F + Sbjct: 178 RDGSREGYDVELLKTVSGIVSIPVIALGGIGRFDQLAEGAIEGGCQALSAANIFQHMEHS 237 Query: 241 IGELKAYLATQGVEIRI 257 KA + + +R+ Sbjct: 238 TIAAKAQMRNAKLNVRL 254 >UniRef50_Q6SHC0 Imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=uncultured marine bacterium 440 RepID=Q6SHC0_9BACT Length = 262 Score = 124 bits (312), Expect = 3e-27, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 17/263 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA---------- 54 RIIP L +++G +V+ F H+ IG+++ AKR + DELV+ DIT Sbjct: 6 RIIPVLFIKNGLIVRSQNFYKHQFIGNVIEQAKRLNDYDVDELVYIDITRNDNYDLGRDD 65 Query: 55 -SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + S + +++V +P GGI+S++DA + GADKI+INS D ++ Sbjct: 66 LLVKSKRDIMSIIKDISKVCFMPLTFGGGIRSVDDAVNRIRAGADKITINSLLYKDLNIV 125 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 ++ G Q +V ID E + T E +D++++++ G GE Sbjct: 126 KKIISEIGSQAVVASIDYKIINEKLII------FNNFGQDNTNIELIDFIKKIENLGVGE 179 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + + DG++ G+DL +KK+ ++P+IA GAG++EHFLEA + + A + Sbjct: 180 FFIQNVELDGMQKGFDLNNIKKIVNSVNLPVIACSGAGSLEHFLEAVKIKGLSAVAAGNY 239 Query: 234 FHKQIINIGELKAYLATQGVEIR 256 F+ + + +K L + +R Sbjct: 240 FNYKERSYPIIKKELKDFNINVR 262 >UniRef50_C6N0X3 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0X3_9GAMM Length = 240 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 98/246 (39%), Gaps = 12/246 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ Q + +I V A +A+ GA L D+ + G + Sbjct: 1 MILIPAIDIQAGRCVRLKQGQFEQITIFDTPPVERAAYFAKIGAQRLHVVDLDGAQIGSM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + I GGI+SLE A S G + + S A+++ L T++ Sbjct: 61 QQLPLICSM-QNTGINVQAGGGIRSLEQAKLCFSAGIANLVLGSIAISNRELATQIIQEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I++ +D + ++ D V Q+ G +I+ + Sbjct: 120 SPKNIILALDIRLINGIPIPATH------GWQTMSNRNLWDVVSYYQQLGIQQILCTDIA 173 Query: 181 QDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG+ G + ++ V+ + ASGG E EA V A+ ++ + Sbjct: 174 CDGMMQGPNFSLYQEAVKRFPMIDWQASGGIRNQEDI-EALDKLGVAAAILGLSLYQGTL 232 Query: 240 NIGELK 245 ++ E K Sbjct: 233 HLAEYK 238 >UniRef50_A4EBZ6 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4EBZ6_9ACTN Length = 247 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 102/258 (39%), Gaps = 20/258 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+ G+VV+ + D V +A+ +AE+GA + D++++ Sbjct: 1 MILFPAIDLIGGKVVRLERGDRSRCKVYSDDPVAVARSFAEQGASWVHVVDLSSAFGEDE 60 Query: 61 ----VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + + + V + V GG++SL ++ +GA +I++ + + +P Sbjct: 61 DTCAANSAAIKAICGVDGLSVDVGGGVRSLARIDELAGYGARRIALGTVLVTEPGFAEVA 120 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 A FG + + D V ++ + G +V Sbjct: 121 AQGFGELLV-----------ADIAARDGQVKVNGWRDGAGVALDDAVAQLSELGFKHLVY 169 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL--EAFRDADVDGALAASVF 234 + +DG++ G D+ + V EV P++ASGG ++ A + ++GA+ Sbjct: 170 TDIARDGMQTGIDVAAYRHVAEVAGFPVVASGGISALDDIRALAAVGEGAIEGAITGRAL 229 Query: 235 HKQIINIGELKAYLATQG 252 ++ + + A + Sbjct: 230 YEGNFTLAQALAAARGEE 247 >UniRef50_C6Y3G6 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamideisomerase n=2 Tax=Pedobacter RepID=C6Y3G6_PEDHD Length = 249 Score = 124 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 104/248 (41%), Gaps = 11/248 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+ DG+VV+ + ++ I + + Y G + + D+ + G Sbjct: 1 MYIIPAIDILDGKVVRLTEGDYNQKTVYDVSIAEMIETYRSNGTEFIHIIDLNGAK-GDF 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + V + D+ GGI++++ +L G ++ + + A+ +P + L+ Sbjct: 60 SNQKALFEVIKKTDMRVQYGGGIRTIKQVTDLLDAGIHRVIVGTQAITNPDFLQELSKEV 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + D +++ + + +D+V + + G + +N Sbjct: 120 GKK-----YDYANRIVIAIDVLDEVIKYSGWMESSPIKLMDYVDKCLQLGFFRFLCTDIN 174 Query: 181 QDGVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +E KK+ E + LIASGG +M+ E D+ + ++ I Sbjct: 175 KDGKLGGAAVELYKKLLEHSPFIKLIASGGVSSMKDIEE-LDKYDIRSVVVGKAIYENRI 233 Query: 240 NIGELKAY 247 I ++K + Sbjct: 234 TIDQIKEW 241 Score = 44.3 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 2/90 (2%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 ++ + G I + +N + + + L +V + + + GG T++ + Sbjct: 35 MIETYRSNGTEFIHIIDLNGAK-GDFSNQKALFEVIKKTDMRVQYGGGIRTIKQVTDLL- 92 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQ 251 DA + + + + EL + + Sbjct: 93 DAGIHRVIVGTQAITNPDFLQELSKEVGKK 122 >UniRef50_Q058A3 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=HIS4_BUCCC Length = 245 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 95/250 (38%), Gaps = 11/250 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP LD G++V+ Q + DI ++Y +GA + D+ ++ Sbjct: 2 IIPSLDFIHGKIVRLYQGNYNNKISYKKDIFKQIEKYIYQGATYIHLVDLDGCNNPENRQ 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 KS + + ++ F V GGI+S D + G KI I + A+ P + +G Sbjct: 62 KSMFNIFSNFKNVSFQVGGGIRSKRDIENLFHAGVSKIVIGTSAILYPNKFKKWLKNYGS 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + + + T+ D +++ G I+ +++D Sbjct: 122 K-----NFVLSVDININTKKENKIAIQGWKKTTEINLDDAIKQFIPYGLKNILCTDISRD 176 Query: 183 GVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G +G ++ K ++ + ++ L +SGG ++ + +V+ + + Sbjct: 177 GTFSGPNISLYKYLKNKFPNIVLQSSGGINSISDIYN-LKKNNVEHVIVGRALLENKFTF 235 Query: 242 GEL-KAYLAT 250 E K +L Sbjct: 236 LEASKCWLKE 245 Score = 42.8 bits (99), Expect = 0.011, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 22/90 (24%), Gaps = 1/90 (1%) Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 +GA I L ++ +V GG + F A V Sbjct: 40 YQGATYIHLVDLDGCNNPENRQKSMFNIFSNFKNVSFQVGGGIRSKRDIENLF-HAGVSK 98 Query: 228 ALAASVFHKQIINIGELKAYLATQGVEIRI 257 + + + ++ + + Sbjct: 99 IVIGTSAILYPNKFKKWLKNYGSKNFVLSV 128 >UniRef50_Q7VQW6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=117 Tax=Enterobacteriaceae RepID=HIS4_BLOFL Length = 251 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 94/256 (36%), Gaps = 12/256 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRN--HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 IIP LD+ +G V+ Q + G+ + Y ++GA + D+ + + + Sbjct: 2 IIPALDIINGDAVRLYQGKYQSQSHYGNPYSILSTYVQQGATMIHLVDLDGARNPKNRQL 61 Query: 64 SWVSRV---AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 S + + A + + GGI+ D +L FG +++ + S A+ P + + F Sbjct: 62 SLIKELTHTAITSHLKIQIGGGIRHATDIKTLLKFGVNRVILGSIAITHPKKVKQWFTYF 121 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 N+ + T + + ++ G ++ ++ Sbjct: 122 -----NPSSLVLALDIYIDSKNNRKVVIHGWQKETNIQLEEVIENYNSVGLKHVLCTDIS 176 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G ++ + + + + ASGG + L+ R + V+ + F ++ Sbjct: 177 KDGTLLGSNINLYQSICYKWPKISFQASGGVAKLTEILQ-LRSSGVNSIIIGRSFLEKKF 235 Query: 240 NIGELKAYLATQGVEI 255 + E + + Sbjct: 236 TLTEAISCWQNASSRV 251 >UniRef50_Q056S8 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=4 Tax=Leptospira RepID=HIS4_LEPBL Length = 241 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 101/251 (40%), Gaps = 16/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+ D V+ + E + LA+ +A+ GA L D+ + + Sbjct: 1 MIIIPAIDLFDNCAVRLFKGNYKEKKIYSSEPWKLAEGFAKNGATLLHLVDLNGARNQLG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 +++ + ++ + + + GGI+ E A G D+ + + A+ DP L+ D + Sbjct: 61 INEDSILKIRKTTSLKVQLGGGIRDKEKLAYYDKIGIDRFILGTAAVTDPDLLKFALDNY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + +VV ++ + + D + + K G IV + Sbjct: 121 EKERVVVA----------VDAIDGIVKIAGWEKDSGVRYRDLMDRLAKAGIEHIVFTDIA 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE---AFRDADVDGALAASVFHKQ 237 QDG G +L+ +++ +IASGG +++ ++ + G + ++ Sbjct: 171 QDGTLAGPNLKAYQEILNSYPFQVIASGGISSLKDLMDLSSLKTKIPLYGVITGKALYEG 230 Query: 238 IINIGELKAYL 248 +++ + + + Sbjct: 231 KLDLAKAISSI 241 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 32/99 (32%), Gaps = 1/99 (1%) Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + K GA + L +N + G + + + K+R+ + + GG E Sbjct: 32 PWKLAEGFAKNGATLLHLVDLNGARNQLGINEDSILKIRKTTSLKVQLGGGIRDKEKL-A 90 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 + +D + + + + V + + Sbjct: 91 YYDKIGIDRFILGTAAVTDPDLLKFALDNYEKERVVVAV 129 >UniRef50_P33734 Cyclase n=51 Tax=cellular organisms RepID=HIS5_YEAST Length = 552 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 83/314 (26%), Positives = 132/314 (42%), Gaps = 58/314 (18%) Query: 2 LAKRIIPCLDVR---DGQVVKGVQ----------FRNHEIIGDIVPLAKRYAEEGADELV 48 L +RII CLDVR G +V + +G V LA++Y ++GADE+ Sbjct: 236 LTRRIIACLDVRTNDQGDLVVTKGDQYDVREKSDGKGVRNLGKPVQLAQKYYQQGADEVT 295 Query: 49 FYDITASSDGRVVD---KSWVSRVAEVIDIPFCVAGGIKS-----------LEDAAKILS 94 F +IT+ D + D + + A+ + +P V GGIK LE A+ Sbjct: 296 FLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFR 355 Query: 95 FGADKISINSPALADPTLITR-------------------------------LADRFGVQ 123 GADK+SI + A+ + Sbjct: 356 SGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQAD 415 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 +T Y G+ + + + + + GAGEI+LN +++DG Sbjct: 416 TKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDG 475 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +GYDLE ++ V++ +P+IAS GAG EHF EAF D L A +FH+ + + Sbjct: 476 SNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVND 535 Query: 244 LKAYLATQGVEIRI 257 +K YL G+++R+ Sbjct: 536 VKEYLLEHGLKVRM 549 >UniRef50_B4U8M5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8M5_HYDS0 Length = 234 Score = 122 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 93/244 (38%), Gaps = 17/244 (6%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 + IIP +D++DG VV+ + + + + K + + G + D+ + G Sbjct: 1 MKDFIIPAIDIKDGAVVRLKEGKFENVKVYRQNPIDQFKLFVDLGFTRIHIVDLDGAKVG 60 Query: 59 RVVDKSWVSR-VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + + + + D + GGI+SLE A + GAD I + + A+ D RL Sbjct: 61 IPKNLKLLEDMLKQKNDAKVEIGGGIRSLETAKALFEIGADYIIVGTLAVKDKEEFIRLL 120 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + + I+ N + D + + Sbjct: 121 ELYKDRIILSV-----------DAKNGKVAIGGWEEESSISPCDMARIYDNYPIESYLYT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +N DG G D+ K ++ P+IASGG ++E ++ V+G + ++ Sbjct: 170 NINIDGTLTGVDINPYKDFKKCTTKPIIASGGVASLEDVIKL--KTVVNGVVVGKAIYEN 227 Query: 238 IINI 241 I+I Sbjct: 228 KIDI 231 Score = 43.9 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 2/83 (2%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLK-KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 G I + ++ V +L+ L+ +++ + GG ++E +A + D Sbjct: 45 GFTRIHIVDLDGAKVGIPKNLKLLEDMLKQKNDAKVEIGGGIRSLETA-KALFEIGADYI 103 Query: 229 LAASVFHKQIINIGELKAYLATQ 251 + ++ K L + Sbjct: 104 IVGTLAVKDKEEFIRLLELYKDR 126 >UniRef50_B1ZW12 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Opitutaceae RepID=HIS4_OPITP Length = 243 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 90/241 (37%), Gaps = 19/241 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 I P +D++ G+ V+ Q R + + +A ++ G++ + D+ + G Sbjct: 1 MTIYPAIDIKGGRCVRLTQGRAEQETIYAQNPADVAMQFRAAGSEWVHVVDLDGAFAGEP 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + V + + + GG+++ + L+ G ++ + + A + + L F Sbjct: 61 QNLAAVQAIV-AVGMKVQFGGGLRTRAAVERALALGVSRVVLGTRAAESESFVGELVQAF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G + G N + TL + + G ++ + Sbjct: 120 GDKI-----------AVGIDAKNGKVAVKGWVATADLSTLVLARRMDTLGVATLIHTDIG 168 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE----AFRDADVDGALAASVFHK 236 DG+ G +L + + +IASGG + + A R A++DG + ++ Sbjct: 169 TDGMLTGPNLAAQEALCSAVKSRVIASGGVSRRDDVVNLAKLAQRHANLDGVIVGKALYE 228 Query: 237 Q 237 + Sbjct: 229 R 229 >UniRef50_D1RFK6 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RFK6_LEGLO Length = 246 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 100/246 (40%), Gaps = 12/246 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG---DIVPLAKRYAEEGADELVFYDITASSDGRV 60 +IP +D++ G+ V+ Q + ++ + A +A+ GA L D+ + G + Sbjct: 1 MILIPAIDLQAGRCVRLRQGQFDQVTQFDMSPIDRASYFAKLGAKRLHIVDLDGAKIGTM 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + + GGI+SLE A S G + I S A+ DP L T++ + Sbjct: 61 QQLPLICTM-QHTGVTVQAGGGIRSLEQAKTCYSAGISLLVIGSIAITDPGLTTKIINEI 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I++ +D + + + + + V Q+ G +I+ + Sbjct: 120 SPKNIILALDIRMENKIPLPATH------GWQTTSTMNLWEVVSFYQQLGITQILCTDIA 173 Query: 181 QDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 DG+ G + + ++ E ++ ASGG + + + + A+ ++ + Sbjct: 174 SDGMMQGPNFDLYQEAVERFPNIAWQASGGIRHQDDINK-LQKLGIKAAILGLTMYQDVF 232 Query: 240 NIGELK 245 N+ + Sbjct: 233 NLKSIL 238 Score = 44.7 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 10/88 (11%), Positives = 32/88 (36%), Gaps = 2/88 (2%) Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GA + + ++ + L + + + V + A GG ++E A + + Sbjct: 43 GAKRLHIVDLDGAKIGTMQQLPLICTM-QHTGVTVQAGGGIRSLEQAKTC-YSAGISLLV 100 Query: 230 AASVFHKQIINIGELKAYLATQGVEIRI 257 S+ ++ ++ + + + + Sbjct: 101 IGSIAITDPGLTTKIINEISPKNIILAL 128 >UniRef50_C7GBG4 Imidazoleglycerol phosphate synthase, cyclase subunit n=2 Tax=Roseburia RepID=C7GBG4_9FIRM Length = 252 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 91/258 (35%), Positives = 132/258 (51%), Gaps = 6/258 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IP L + +VKGV F + + ++P K Y DEL+ DI A+++ R Sbjct: 1 MLKVRVIPTLLYKSVGLVKGVGFNSWRRVDTVLPAIKVYNMREVDELILLDIEATNEKRD 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + + +PFCV GGI ++ +L GADK++INS A + +LIT A F Sbjct: 61 PDYDEIRDFSRECFVPFCVGGGICHIDQIKNLLRAGADKVAINSAAYDNLSLITEGAKLF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QCIV ID + + + T W DW+ +V + GAGEI+L + Sbjct: 121 GSQCIVASIDCRK------IDGEYHCFSHNGSVDTGWLLQDWIIKVVEAGAGEILLTSVE 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 DG GYD+E +K + +VP+IASGGAG EH +A ++ AAS++H Sbjct: 175 LDGTMEGYDVEMIKIATSLVNVPVIASGGAGNYEHMRKAVQEGGASAVAAASIYHFTEQT 234 Query: 241 IGELKAYLATQGVEIRIC 258 E K YL GV +R+ Sbjct: 235 PKEAKEYLGEHGVAVRMI 252 >UniRef50_C8WUX9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WUX9_ALIAD Length = 252 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 19/253 (7%) Query: 6 IIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 + P +D+ G+VV+ Q GD +A R + GA L D+ A+ G+ + Sbjct: 8 VYPAIDILGGEVVRLRQGDYQQVTRYDGDPAGVAGRLCDAGARFLHVVDLDAARSGQSDN 67 Query: 63 KSWVSRVAE---VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + V + E V GGI++ + A+ L G ++ I + + Sbjct: 68 ERAVRAIVETAASYGAAVQVGGGIRTKDAIARWLEAGVARVVIGT-----------AVRQ 116 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 V + G T+W D +E+ K G + ++ + Sbjct: 117 VEVVAEWAQEFGGHRLVAGLDGRKGRLAVSGWLEETEWSIFDLARELAKVGLVQALVTDV 176 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +L+ L + + IASGG G+++ + A R A + GA+ H I Sbjct: 177 ERDGTGEGPNLD-LALGVQETGLFAIASGGIGSIDDVV-AVRRAGLAGAVIGKALHDGRI 234 Query: 240 NIGELKAYLATQG 252 ++GEL LA + Sbjct: 235 HLGELFQRLAQEE 247 >UniRef50_B5YE89 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Dictyoglomus RepID=HIS4_DICT6 Length = 242 Score = 119 bits (299), Expect = 7e-26, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 100/254 (39%), Gaps = 20/254 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +D+ +VV+ + +I+ + + LAK + E+GA L D+ ++ D Sbjct: 1 MLIIPAIDIYKHKVVRMETGKKEKIVLEFNNPLDLAKYWEEKGAKALHLIDLQSAIDAND 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 KS V + + IP V GG +S E + +S+G ++ ++S + + L ++ Sbjct: 61 ESKSIVRDIVRSVSIPVEVGGGYRSREKIEEAISWGVWRVIVSSILGMELDYLLDLFSKY 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I + E D +++ E++ ++ Sbjct: 121 ENKIIPSIDWYDGKVGIKGW-------------QDFIEWRDIKRKIDLLKVREVIFTDIS 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF---RDAD-VDGALAASVFHK 236 +DG G +LE +K + + +GG ++E ++ + + G + + Sbjct: 168 RDGTLKGVNLENIKNFLSLHDYDVWIAGGISSIEDVIKIKDLSENTGRIKGIIIGRALLE 227 Query: 237 QIINIGELKAYLAT 250 IN E K + Sbjct: 228 GKINWEEAKKIIDA 241 >UniRef50_D2NNQ2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide isomerase n=2 Tax=Rothia mucilaginosa RepID=D2NNQ2_9MICC Length = 262 Score = 119 bits (299), Expect = 7e-26, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 99/262 (37%), Gaps = 21/262 (8%) Query: 5 RIIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 ++P +D+ +G V+ V E D V A + + GA + D+ + GR + Sbjct: 7 ELLPAVDISEGYAVRPVGGTLSGGEQRLDPVEAALTWVKAGARWIHLVDLDLAF-GRGTN 65 Query: 63 KSWVSRVAEVI-----------DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 ++ V + + V+GG+++ E + LS D++++ S ALAD + Sbjct: 66 TEVLAEVVAAVRAENARMTGSAPVRIQVSGGVRNPESLERALSLNPDRVNVTSAALADSS 125 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + R+ ++ + + T + + + ++ G Sbjct: 126 WLEGTLARYADSDLLAL-----GLDARYTPERGWVTVARGTDWSGPGVAEALAWLEGAGV 180 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA--FRDADVDGAL 229 ++ +++DG G E L V P++ASGG ++ ++ + ++G + Sbjct: 181 RRYIVTDVSKDGSLAGPGAELLDVVLAQTDRPVVASGGVASLADLVKLRSMVPSGLEGVV 240 Query: 230 AASVFHKQIINIGELKAYLATQ 251 + + + ++ Sbjct: 241 LGKALYVGNFSFEQALEIAGSR 262 >UniRef50_Q8TYD6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Methanopyrus kandleri RepID=HIS4_METKA Length = 242 Score = 119 bits (299), Expect = 8e-26, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 101/252 (40%), Gaps = 14/252 (5%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDG 58 +A +IP +DV +G+ V+ V+ D V A +++E + D+ A+ G Sbjct: 1 MAFVVIPSVDVVEGKCVQLVEGDPERRTFESDDPVETAHQWSEF-FPWIHVVDVDAA-RG 58 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + R+ E +D V GGI+S E A +++ GAD++ + + A D +++ D Sbjct: 59 EGDNSDIIGRICEEVDAKVQVGGGIRSAERAEELIELGADRLIVGTVAFTDKDDFSKIVD 118 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + + S + TL+ E A + Sbjct: 119 VCHD--------HGIEVFVALDVNENHEVLVSGWKEDAGVTLEDAIERFNEVADGYLTTA 170 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 ++ +G G D + ++K +P++ +GG +++ A ++A G + + + Sbjct: 171 VHVEGKEMGIDEKVVEKSTGATDLPVLYAGGIASIKDVKRA-KEAGAYGVVIGTALYHGD 229 Query: 239 INIGELKAYLAT 250 I+ L + Sbjct: 230 IDPVALLDLMEE 241 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 28/91 (30%), Gaps = 2/91 (2%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 I + ++ G + + + ++ E + GG + E E Sbjct: 39 HQWSEFFPWIHVVDVDAAR-GEGDNSDIIGRICEEVDAKVQVGGGIRSAERAEELIE-LG 96 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEI 255 D + +V + ++ G+E+ Sbjct: 97 ADRLIVGTVAFTDKDDFSKIVDVCHDHGIEV 127 >UniRef50_A7S213 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S213_NEMVE Length = 570 Score = 119 bits (299), Expect = 8e-26, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 67/217 (30%), Gaps = 7/217 (3%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKIL 93 + + GAD T G+ + + V R + + G ++ A++L Sbjct: 235 RICKQYGADITCGEMAMCTNLLQGQQSEWALVKRHSSEDIFGVQLCGAFPDTMTKCAELL 294 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 D I IN+ D + + + Sbjct: 295 QKETDVDFIDINTGCPIDLVFNKGAGSALMERKGKLQQIVQGMKSVIDIPLTVKIRAGIH 354 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVRE-VCHVPLIASGG 209 + W V ++ G + ++ +++ D + + +V + +P+ +G Sbjct: 355 DKKYTWNAHKLVGNLRDWGTDMVTIHGRSREQRYTKSADWDYISEVAKLASPMPVFGNGD 414 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E ++ + A V G + A + E+K Sbjct: 415 ILSFEDAMQHRKQAGVAGVMIARGAIIKPWIFTEIKE 451 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 6/120 (5%) Query: 9 CLDVRDGQVVKGVQFR-NHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWV 66 +D+ VK + + + L + G D + + + + D ++ Sbjct: 340 VIDI--PLTVKIRAGIHDKKYTWNAHKLVGNLRDWGTDMVTIHGRSREQRYTKSADWDYI 397 Query: 67 SRVAE-VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 S VA+ +P G I S EDA + G + I A+ P + T + ++ Sbjct: 398 SEVAKLASPMPVFGNGDILSFEDAMQHRKQAGVAGVMIARGAIIKPWIFTEIKEQRHWDI 457 >UniRef50_B0SDS6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Leptospira biflexa serovar Patoc RepID=HIS4_LEPBA Length = 247 Score = 119 bits (298), Expect = 9e-26, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 107/254 (42%), Gaps = 16/254 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++P +D+ D + V+ +Q + + + + E+GA + D+ A+ G+ Sbjct: 1 MLVLPAIDLLDNEAVRLLQGDYSKKTVYSSSPEKMIQVFEEQGATLIHIVDLNAAKTGKS 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ + ++ E + + GGI+++++ G ++ + + A+ +P ++ + F Sbjct: 61 ENEKTIKKIKEKCTVDLELGGGIRTIDNMKFYDGLGVSRLILGTVAVEEPNVVEKAVSLF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G IV+G N Y + + D++ + G ++ + Sbjct: 121 GQDRIVIG----------VDAKNGYVRTKGWESNSGILYKDFLTTMYGMGIRHVIFTDIA 170 Query: 181 QDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDAD--VDGALAASVFHKQ 237 +DG+ G + ++ E + L+ASGG + E +E + + + GA+ ++ Sbjct: 171 RDGMMEGPNTLAYAELLETFPDLQLVASGGVSSKEDLVELYDKTNGKLFGAITGKAIYEG 230 Query: 238 IINIGELKAYLATQ 251 +++ E L + Sbjct: 231 KLDLKESIRILNQK 244 >UniRef50_A1ZVN4 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZVN4_9SPHI Length = 246 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 93/250 (37%), Gaps = 15/250 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 +I+P + + G+VV+ ++ + + + LA + G L D+ + ++ Sbjct: 2 IKIVPSIAILGGKVVRTIKGDIDQVQVYDTNPLDLALEFENNGIKHLHLVDLDGAKARQI 61 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V+ + + +A + GGI +D GA ++ + Sbjct: 62 VNYNILEMLASYTQLEIDYTGGITRDDDIRTAFECGAKHVTAATV----------AVHER 111 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 V ++ + + T + ++ ++ +RG + + Sbjct: 112 EKFLSWVITYGGNKVILAADALDGVVLTKGWRKNTGIDLVEHIKSYHERGVRFVKTTEIG 171 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++G G + + KK+R E + ++ASGG ++E + V G + ++ I Sbjct: 172 RNGTLEGPNFDTYKKLRTEFPELQILASGGIRSIEDIEQ-LDALGVAGVIIGKSYYDGQI 230 Query: 240 NIGELKAYLA 249 + +L+ ++ Sbjct: 231 KLKDLQKFIG 240 >UniRef50_C2FZQ4 Possible isomerase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZQ4_9SPHI Length = 250 Score = 117 bits (292), Expect = 5e-25, Method: Composition-based stats. Identities = 37/248 (14%), Positives = 98/248 (39%), Gaps = 10/248 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IIP +DV D +VV+ + + RY G + + D+ + G Sbjct: 1 MYIIPAIDVLDKKVVRLREGNYDDVTTYDISLEEQIDRYHANGTELVHIIDLNGAK-GDF 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 ++ ++ + ++ GG++S+E +++ G ++ + + A+ +P + L+ Sbjct: 60 SNQEYLFNIIRKTEMKIQYGGGVRSIEKVKELIDAGVFRVIVGTQAITNPEFLEELSTLN 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + +++ + + ++++ + G + ++ Sbjct: 120 EGKIKYADHIVIAI-----DVLDEVIKYSGWLESSPIKLIEYIDKCLALGFYRFLCTDIS 174 Query: 181 QDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG G +E KK+ + + LI SGG +M+ + ++ + ++ I Sbjct: 175 KDGKLGGAGVELYKKLLDHSPIIKLIGSGGISSMDDIRKLQELGRMESCVVGKAIYENRI 234 Query: 240 NIGELKAY 247 +I E++ + Sbjct: 235 SIEEIQDW 242 Score = 39.7 bits (91), Expect = 0.087, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 2/86 (2%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 G + + +N + + E L + + + GG ++E E DA V Sbjct: 39 YHANGTELVHIIDLNGAK-GDFSNQEYLFNIIRKTEMKIQYGGGVRSIEKVKELI-DAGV 96 Query: 226 DGALAASVFHKQIINIGELKAYLATQ 251 + + + EL + Sbjct: 97 FRVIVGTQAITNPEFLEELSTLNEGK 122 >UniRef50_C4R8P0 Imidazole glycerol phosphate synthase (Glutamine amidotransferase:cyclase) n=8 Tax=Saccharomycetales RepID=C4R8P0_PICPG Length = 561 Score = 116 bits (291), Expect = 6e-25, Method: Composition-based stats. Identities = 84/314 (26%), Positives = 132/314 (42%), Gaps = 60/314 (19%) Query: 2 LAKRIIPCLDVR---DGQVV-----------KGVQFRNHEIIGDIVPLAKRYAEEGADEL 47 L +RII CLDVR G +V K +G V +A++Y ++GADE+ Sbjct: 246 LTRRIIACLDVRTNDSGDLVVTKGDQYDVREKSESGDV-RNLGKPVEMAEKYYQQGADEV 304 Query: 48 VFYDITASSDGRVVD---KSWVSRVAEVIDIPFCVAGGIKSLED-----------AAKIL 93 F +IT+ + + D + R AE + +P V GGIK + D A Sbjct: 305 TFLNITSFRNSPIKDAPMLEVLKRAAETVFVPLTVGGGIKDVVDPDGTKVPALKVATLYF 364 Query: 94 SFGADKISINSPALADPTLITRLADR-------------------------------FGV 122 GADK+SI + A+ R ++ Sbjct: 365 RAGADKVSIGTDAVLAAEEFYRNNEKGTGLTPIETISASYGVQAVVISVDPKRFYVADPS 424 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + I T + G+ + + V + +K GAGEI+ N +++D Sbjct: 425 KTPYKTIKTKFPGPNGENYCYYKVTSQGGRNVHDLGAWELCYACEKLGAGEILCNCIDKD 484 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G +GYDLE + ++ +P+IAS GAG HF E FR + D AL A +FH+ + Sbjct: 485 GSNSGYDLELIDYIKSATKLPVIASSGAGNPSHFEEVFRKTETDAALGAGMFHRGEYTVK 544 Query: 243 ELKAYLATQGVEIR 256 E+K +L +G+ +R Sbjct: 545 EVKDFLTKRGLLVR 558 >UniRef50_A0LAC8 Imidazole glycerol phosphate synthase subunit hisF n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAC8_MAGSM Length = 260 Score = 116 bits (291), Expect = 6e-25, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 7/224 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFR--NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 M R+IP L +++G++VK V+F +GD V AK + ++ DEL DI+AS G Sbjct: 1 MRRIRVIPTLLLKEGRLVKTVRFNQAKATYVGDPVNTAKIFNDKEVDELAVLDISASRRG 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 D V ++A +P GG+++L+ ++ G +K+ +N+ + L+ Sbjct: 61 AEPDFECVEQLASECFMPLLYGGGVRNLQQIQRLFHSGVEKVMLNTAFFSGSGLLQEAVK 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 +G Q + V ID D + R T + + Q+ ++ GAGE++LN Sbjct: 121 IYGSQSLGVSIDVKKDLWGRYR-----VMSQGGQRKTGLDPVVAAQQAEQAGAGELLLNA 175 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 M+QDG++ GYDLE +++V +P+IA GGA ++ F Sbjct: 176 MDQDGMQQGYDLELVQRVSRGVAIPVIAVGGAASVADFRTVVTQ 219 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 E+ + ++ D E ++++ C +PL+ GG ++ F + V+ + Sbjct: 46 VDELAVLDISASRRGAEPDFECVEQLASECFMPLLYGGGVRNLQQIQRLF-HSGVEKVML 104 Query: 231 ASVFHKQIINIGELKAYLATQGVEIRI 257 + F + E +Q + + I Sbjct: 105 NTAFFSGSGLLQEAVKIYGSQSLGVSI 131 >UniRef50_A5INE5 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Thermotogaceae RepID=HIS4_THEP1 Length = 241 Score = 116 bits (291), Expect = 7e-25, Method: Composition-based stats. Identities = 44/254 (17%), Positives = 102/254 (40%), Gaps = 21/254 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE---IIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ++P +D+ G+V + V+ + D L K+ EEG + D++ + + V Sbjct: 1 MLVVPAIDLFRGKVARMVKGKKENTIFYEKDPAELVKKLIEEGFTLIHVVDLSKAIENSV 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + R++E + + GGI+S + A ++ G + ++S L DP+ + L + Sbjct: 61 ENFPVLERLSEFAE-HIQIGGGIRSFDYAERLRKLGYKRQIVSSKVLEDPSFLKFLKE-- 117 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + + + + ++ +++ G EIV + Sbjct: 118 ----------IDVEPVFSLDTRGGKVAFKGWLAEEEIDPISLLKRLKEYGLEEIVHTEIE 167 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAG---TMEHFLEAFRDAD--VDGALAASVFH 235 +DG +D +K+ V + A+GG +++ R+ + + G + F Sbjct: 168 KDGTLQEHDFSLTRKIAIEAEVNVFAAGGISSENSLKTAQRVHRETNGLLKGVIVGRAFL 227 Query: 236 KQIINIGELKAYLA 249 + I+ + +K Y Sbjct: 228 EGILTVEVMKRYAR 241 >UniRef50_B0VH62 Dihydrouridine synthase family protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH62_9BACT Length = 321 Score = 115 bits (289), Expect = 9e-25, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 60/217 (27%), Gaps = 5/217 (2%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG--IKSLEDAAKI 92 + GA+ L + +V + G + + Sbjct: 26 QICKNWGAEVLYSEMVSADGLTRNSAKTLQYVQFDESEHPFGIQIFGSNPLIMARAVEVL 85 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 L D + IN + + G + S Sbjct: 86 LPLKPDFMDINMGCPVKKVIRKGAGSALMQTPSLAGKIVKEVKNALLGRIPLSVKFRSGW 145 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAG 211 L + +Q+ GA + L+ + +G + EQ+K +++ +P++ +G Sbjct: 146 NFQNQNYLQFGLMLQECGADFLCLHPRTSSQMFSGTSNWEQIKILKQNVQIPVVGNGDIK 205 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 T E + + DG + + + + + Sbjct: 206 TPEDAQRMITETNCDGIMIGRGALGKPWLFAQSRQLI 242 Score = 79.4 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 3/105 (2%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVS 67 L R VK N + + + E GAD L + T+S + + Sbjct: 130 ALLGRIPLSVKFRSGWNFQN-QNYLQFGLMLQECGADFLCLHPRTSSQMFSGTSNWEQIK 188 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPT 111 + + + IP G IK+ EDA +++ D I I AL P Sbjct: 189 ILKQNVQIPVVGNGDIKTPEDAQRMITETNCDGIMIGRGALGKPW 233 >UniRef50_A9NE09 tRNA-dihydrouridine synthase n=2 Tax=Mollicutes RepID=A9NE09_ACHLI Length = 336 Score = 114 bits (284), Expect = 4e-24, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 68/226 (30%), Gaps = 6/226 (2%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKIL 93 +A++ G A + E + G ++++ +AA + Sbjct: 30 MARQL-GAGVVFAEMVSDKAIFFQNPKTLQMLYMTVEEKPAAQQIFGSDLETMVEAAMFI 88 Query: 94 SFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 D I IN P + + I A K S Sbjct: 89 DKNSNCDFIDINMGCPV-PKVAIGAQAGASLMKDPQKIYDIVKAIKEKVSKPVTVKIRSG 147 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 ++ + ++K GA I ++ + +G DL+ +K V+E +P+I +G Sbjct: 148 WDSESVNAVEVAKMIEKAGASLITVHARTRAQGYSGEPDLDVIKAVKEAVSIPVIGNGNI 207 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + D + E+ AYL + +R Sbjct: 208 VDGKSAKHMLEYTGCDAVMIGRASLGNPWIFREINAYLNGEETPVR 253 Score = 94.8 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 3/114 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 V VK + E + + V +AK + GA + + T + D + V Sbjct: 136 VSKPVTVKIRSGWDSESV-NAVEVAKMIEKAGASLITVHARTRAQGYSGEPDLDVIKAVK 194 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 E + IP G I + A +L + G D + I +L +P + + + Sbjct: 195 EAVSIPVIGNGNIVDGKSAKHMLEYTGCDAVMIGRASLGNPWIFREINAYLNGE 248 >UniRef50_C0WDP2 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WDP2_9FIRM Length = 321 Score = 114 bits (284), Expect = 4e-24, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 67/226 (29%), Gaps = 8/226 (3%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-- 93 E GAD V A + ++ + + G + S AA + Sbjct: 27 ICRENGADYTVSEMVSAKALLYKNQKTFAMLTIDPKEHPTAIQLFGSVPSELAAAGKIVE 86 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 S GAD I +N + + A + + Sbjct: 87 SRGADMIDVNMGCPVHKIVSNGEGSALMKDPD--KVYAILAALVDAVSIPVTVKFRAGWD 144 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 Q +K G + ++ + G D + ++ V+E +P++ +G Sbjct: 145 EAHKNAAVIAQMAEKAGVSAVCVHGRTRAQFYQGKADWDIIRAVKESVGIPVLGNGDIFH 204 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV-EIRI 257 E L + DG + A ++KA L + + + + Sbjct: 205 AEDALRMKEETGCDGVMIARGAEGNPWIFRDVKALLHGKAISPVSV 250 Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 3/111 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + V +A+ + G + + T + + D + V E + Sbjct: 134 PVTVKFRAGWDEAHKNAAV-IAQMAEKAGVSAVCVHGRTRAQFYQGKADWDIIRAVKESV 192 Query: 74 DIPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRLADRFGVQ 123 IP G I EDA ++ G D + I A +P + + + Sbjct: 193 GIPVLGNGDIFHAEDALRMKEETGCDGVMIARGAEGNPWIFRDVKALLHGK 243 >UniRef50_Q0AP83 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Alphaproteobacteria RepID=HIS4_MARMM Length = 244 Score = 113 bits (282), Expect = 6e-24, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 100/252 (39%), Gaps = 12/252 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + P +D+ DG+VV+ + + D + +A+++ E GA + D++ + DG Sbjct: 1 MILYPAIDLLDGRVVRLHKGAFDAVTDYGDDPMRVAEQFGEAGAVWVHIVDLSGARDGAR 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + + + GG++S ED +L+ G +++ I S A+ D + + Sbjct: 61 RQGALIRSLC-ETGLRVQTGGGVRSAEDIEDLLAAGVERVIIGSLAVTDTNRVAGWLQNY 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G I + +D + + + T + D + + G ++ + Sbjct: 120 GGDRITLALDVRQIGGQYRPAL------KGWTDMADTTLDDVISAYEGTGLAHALVTDIG 173 Query: 181 QDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +DG +G ++ K++ + ++ ASGG +++ A ++ Sbjct: 174 RDGDLSGPNIALYKRLATDYPNIDWQASGGVSSLDDLRAARAAGAAGAI-TGKALYEGRF 232 Query: 240 NIGELKAYLATQ 251 +GE A L Sbjct: 233 TVGEAIACLRDA 244 >UniRef50_D2RLJ7 TIM-barrel protein, nifR3 family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLJ7_ACIFE Length = 331 Score = 113 bits (282), Expect = 7e-24, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 66/222 (29%), Gaps = 7/222 (3%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKIL 93 E GAD V A + + + + G + ++ A + Sbjct: 35 ICRELGADYTVSEMVSAKALLFKNPKTFAMLEVDPREHPVAIQLFGSVPEELVKGAKIVA 94 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GAD I N + + + Sbjct: 95 EHGADIIDFNMGCPVHKIVANGEGSALMKDPERAYACLAALVDA--VDRPVTVKFRAGWD 152 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 ++ + +K G + ++ + +G D + +++V+E +P++ +G T Sbjct: 153 EDHRNAVEIARLAEKAGVAAVAVHGRTRGQFYSGKADWDIIRQVKEAVSIPVLGNGDVFT 212 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + L+ DG + A E++A LA + + Sbjct: 213 AQDALDLLAATHCDGVMIARGAQGNPWIFREVQAVLAGKTIP 254 Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 3/111 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 V VK + + V +A+ + G + + T D + +V Sbjct: 139 VDRPVTVKFRAGWDE-DHRNAVEIARLAEKAGVAAVAVHGRTRGQFYSGKADWDIIRQVK 197 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRF 120 E + IP G + + +DA +L+ D + I A +P + + Sbjct: 198 EAVSIPVLGNGDVFTAQDALDLLAATHCDGVMIARGAQGNPWIFREVQAVL 248 >UniRef50_C6XVQ0 Histidine biosynthesis protein n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XVQ0_PEDHD Length = 288 Score = 112 bits (281), Expect = 9e-24, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 6/222 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+ L V+DG VV+ + F+ + +G + + G DE++ DI+A+ Sbjct: 1 MLKKRVAANLVVKDGIVVQSIGFKKYLPVGKPEIAIEFLNQWGIDEIILTDISATRKQSG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + R A+ +P V GGI + ++L GADKIS+N+ A+ P LIT A F Sbjct: 61 PDFDMIRRAAQKCFVPLTVGGGISNTGQMKELLHNGADKISLNNAAITTPELITETAHIF 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G QC+V+ ID + + + + ++ + + GAGEI++N ++ Sbjct: 121 GGQCVVISIDGIHTNKGFRIYDYLTHSAL------DISPSEFAKRAEDSGAGEILINSVD 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 +DG G+D E + V V ++P+I GGA F+E F Sbjct: 175 RDGSYLGFDHELINSVCSVVNIPVIVCGGAKNAGDFIEVFSK 216 >UniRef50_A8A8V9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8V9_IGNH4 Length = 235 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 19/248 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 R+ P +DV +G+ VK V+ +GD V A+ +A EGA L D+ + G+ + Sbjct: 1 MRVFPSIDVSEGRAVKRVRGVKGTGLDLGDPVKWAEFWALEGAKGLHVVDLDGAEAGKPI 60 Query: 62 DKSWVSRV---AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + +++V A+ + VAGG++ +E + AD I S A DP + ++ Sbjct: 61 NVEVINKVIEKAKEYGLWVQVAGGLREVEHLERY--PKADAFVIGSRAHKDPEFLEVASE 118 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 G ++V E + +++ + R + Sbjct: 119 AVGADKVIVA----------IDLKGGKVSVEGWKEEIPVGLKEALEKFKGRSFRGFLYTY 168 Query: 179 MNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 ++ +G G D+ +K + RE L +GG G+ EH + A D + + Sbjct: 169 VDTEGTMEGPDVSGVKYIRREYPDKLLEYAGGVGSPEHV-KLLESAGADVVVLGMALYSG 227 Query: 238 IINIGELK 245 + + +L Sbjct: 228 KLRLKDLV 235 Score = 49.7 bits (117), Expect = 9e-05, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 6/110 (5%) Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV---REVCHVPLIAS 207 T + + + W + GA + + ++ ++E + KV + + + + Sbjct: 23 GTGLDLGDPVKWAEFWALEGAKGLHVVDLDGAEAGKPINVEVINKVIEKAKEYGLWVQVA 82 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 GG +EH D + S HK + + V + I Sbjct: 83 GGLREVEHLER---YPKADAFVIGSRAHKDPEFLEVASEAVGADKVIVAI 129 >UniRef50_A7SPR8 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SPR8_NEMVE Length = 545 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 61/308 (19%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 II D + VKG + + +GD V L +R+ +GADE+ F +IT+ + D + Sbjct: 244 EIIS--DDEGNKPVKG----DVKAVGDPVELGERFFSDGADEIAFLNITSFRSSPIHDLA 297 Query: 65 WVSRVAEVI---DIPFCVAGGIKS---------------------LEDAAKILSFGADKI 100 + + + +PF V GGI+ LE AA GADK+ Sbjct: 298 MLKLLRKCCERIFVPFTVGGGIRDIYALDPDSVEEGKPVMRQFSALEVAAMYFKSGADKV 357 Query: 101 SINSPALA-------------DPTLITRLADRFGVQC------------------IVVGI 129 S+ S A+ T I ++A+R+G Q + Sbjct: 358 SVASDAVYAAEEFIASGHKKTGKTSIEKIAERYGRQAVVLAVDTKTVYVPSPDSTKHHTV 417 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 Y G+ +V + + V+ ++ GAGEI+LN +++DG +GYD Sbjct: 418 KARYPGPNGEKYVWWQCTVKGGRETRDVGAYELVKACEELGAGEILLNNIDRDGTNHGYD 477 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 L+ +K V+ +P+IAS GAG + F++ FR+ + DGA+A ++FH+ ++I ++K +L Sbjct: 478 LDLVKMVKGAVSIPVIASSGAGHVSDFVDLFRETNADGAMAGAIFHRGEVDITDVKEHLR 537 Query: 250 TQGVEIRI 257 +G +R+ Sbjct: 538 NEGFTVRL 545 >UniRef50_Q7ZWS1 tRNA-dihydrouridine synthase 3-like n=3 Tax=Xenopus RepID=DUS3L_XENLA Length = 640 Score = 110 bits (276), Expect = 3e-23, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 64/215 (29%), Gaps = 6/215 (2%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKIL 93 + GAD T G+ + + + R + G ++ A++L Sbjct: 312 RICKRLGADITCGEMAMCTNLLQGQPSEWALLKRHHSEDIFGVQLEGAFPDTMTKCAELL 371 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + D ++ L+ + G+ + V + + Sbjct: 372 NRTIDVDFVDINVGCPIDLVYKKGGGCGLMNRTNKFEQIVKGMNSVLDVPLTVKIRTGVQ 431 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIASGGAG 211 + ++ G + L+ +++ + E + + + VPL +G Sbjct: 432 EKVNIAHKLIPNLRDWGVSLVTLHGRSREQRYTKLANWEYIDQCAKIASPVPLFGNGDII 491 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E A + V G + A + E+K Sbjct: 492 SYEDANRALQ-TGVAGVMLARGALFKPWLFTEIKE 525 Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 52/170 (30%), Gaps = 5/170 (2%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVS 67 LDV VK + + L + G + + + ++ + ++ Sbjct: 417 VLDV--PLTVKIRTGVQEK-VNIAHKLIPNLRDWGVSLVTLHGRSREQRYTKLANWEYID 473 Query: 68 RVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 + A+ +P G I S EDA + L G + + AL P L T + ++ Sbjct: 474 QCAKIASPVPLFGNGDIISYEDANRALQTGVAGVMLARGALFKPWLFTEIKEQRHWDISS 533 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 T + + + + ++ + G + Sbjct: 534 TERFDILKDFTNYGLEHWGSDCQGVEKTRKFMLEWLSFLCRYIPVGLLEH 583 >UniRef50_B9U3E3 HisA n=1 Tax=Taylorella equigenitalis RepID=B9U3E3_9BURK Length = 251 Score = 110 bits (275), Expect = 4e-23, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 103/259 (39%), Gaps = 23/259 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFY--DITASSDG 58 IIP + ++DG+ V D + LAK++A+ GAD L + AS+ Sbjct: 1 MWIIPSIYIQDGKCVHVSYGDKTSSSPFEIDPLDLAKKWADLGADRLHIVQLGLNASTQN 60 Query: 59 RVV---DKSWVSRVAEVID--IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + +S++ E + +P +AGGIK++ L G D + + S + DP + Sbjct: 61 ATSLSKNNEVLSKLIEEVSHYLPLQIAGGIKTMASIESYLDMGFDFVVVGSAGVKDPHFM 120 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 F Q I+ + +S ++VT+++ + Q + G Sbjct: 121 NDACSAFNGQVILGL-----------DARDGKVVTDSWSKVTKFDAVTIAQRLTDEGIDS 169 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG--TMEHFLEAFRDADVDGALAA 231 I+ M DG +LE + VP++A G G + H ++ D VDG + Sbjct: 170 IIYTDMGPDGNMTEVNLEATLNFAKAVDVPVLACGDVGQLSRFHEIKTLVDHGVDGIILG 229 Query: 232 SVFHKQIINIGELKAYLAT 250 + ++ E + + Sbjct: 230 KSLDLGVYSLQEAIDIVDS 248 >UniRef50_Q2RZL4 NifR3 family enzyme n=2 Tax=Rhodothermaceae RepID=Q2RZL4_SALRD Length = 443 Score = 110 bits (275), Expect = 5e-23, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 69/255 (27%), Gaps = 21/255 (8%) Query: 18 VKGVQFRNHEIIGDIVPLAKR-----------YAEEGADELV--FYDITASSDGRVVDKS 64 V + LA GAD + F + + Sbjct: 63 VSMRIGHLDFD-DRPLFLAPMEDVSDPPFRILCKRYGADMMYTEFVSSAGLLREQEHEHQ 121 Query: 65 WVSRVAEVIDIPFCV-AGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGV 122 + E I V GGI + +A ++ G D I IN + Sbjct: 122 KLEIFDEERPIGIQVWGGGIDEVRNATPMVDAAGPDVIDINFGCPVRKIVQKDGGAGVLR 181 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + T E V +D + ++ G + ++ ++ Sbjct: 182 NLDKMRNITAAVMEEATRPVTV--KTRLGWDDDSIHIVDVARMLEDMGVAALTVHARTRE 239 Query: 183 GVRNG-YDLEQLKKVREVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 G E L+ ++E +P I +G A E F + VDG + Sbjct: 240 QKYKGDARWEWLRTIKEEGTRDMPFIGNGDALDPEAIEAMFEETGVDGVMLGRGALGNPW 299 Query: 240 NIGELKAYLATQGVE 254 K Y+ T + Sbjct: 300 IFERAKTYMETGELP 314 Score = 87.5 bits (215), Expect = 4e-16, Method: Composition-based stats. Identities = 26/194 (13%), Positives = 54/194 (27%), Gaps = 5/194 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEV- 72 VK + IV +A+ + G L + T + W+ + E Sbjct: 200 PVTVKTRLGWDD-DSIHIVDVARMLEDMGVAALTVHARTREQKYKGDARWEWLRTIKEEG 258 Query: 73 -IDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 D+PF G E + G D + + AL +P + R + D Sbjct: 259 TRDMPFIGNGDALDPEAIEAMFEETGVDGVMLGRGALGNPWIFERAKTYMETGELPPPPD 318 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 + H++ ++ + + + + Q + G Sbjct: 319 WEERVQVVAEHLSLKCEWLGERTGVMEMRKNYSSYFKGFRNASTLRHELMQPETKAGVLE 378 Query: 191 EQLKKVREVCHVPL 204 L + + + Sbjct: 379 VMLNFKPDAPDIQV 392 >UniRef50_C1FJN8 Predicted protein n=13 Tax=cellular organisms RepID=C1FJN8_9CHLO Length = 601 Score = 110 bits (274), Expect = 6e-23, Method: Composition-based stats. Identities = 80/311 (25%), Positives = 122/311 (39%), Gaps = 58/311 (18%) Query: 2 LAKRIIPCLDVRD---GQVVKGVQ----------FRNHEIIGDIVPLAKRYAEEGADELV 48 LAKR+I CLDVR G +V + +G V LA +Y ++GADE+ Sbjct: 283 LAKRVIACLDVRSNDAGDLVVTKGDSYDVREKDDGNDVRNLGKPVELAGKYFKQGADEVA 342 Query: 49 FYDITASSD---GRVVDKSWVSRVAEVIDIPFCVAGGIKSL-----------EDAAKILS 94 F +IT D + R +E + +P V GGI+ E AA Sbjct: 343 FLNITGYRDLPLTDAPMLEVLRRSSETVFVPLTVGGGIRDFTDSNGVSYTALEVAAAYFK 402 Query: 95 FGADKISINSPALADPTLIT-------------------------------RLADRFGVQ 123 GADK+SI S A+ R + Sbjct: 403 AGADKVSIGSDAVYVAEQYYANDKKKDGCTSIEQISERYGVQAMVVSIDPRRAYVADPSE 462 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 I T G+ +V + + ++ G GEI+LN +++DG Sbjct: 463 TKNRCIKTSRPGPNGEEYVWFQCTVKGGREGRDIGAYELAIAMEDLGCGEILLNCIDEDG 522 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 NG+D E + V + +P+IAS GAG +HF + F ALAA +FH+ ++I E Sbjct: 523 QGNGFDHELVGLVADAVTIPVIASSGAGEPKHFTDVFNATKCSAALAAGIFHRGEVDISE 582 Query: 244 LKAYLATQGVE 254 +K ++ + Sbjct: 583 VKDHMKGGKIP 593 >UniRef50_B3QWF2 TIM-barrel protein, nifR3 family n=26 Tax=Bacteroidetes/Chlorobi group RepID=B3QWF2_CHLT3 Length = 402 Score = 109 bits (273), Expect = 7e-23, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 69/231 (29%), Gaps = 8/231 (3%) Query: 27 EIIGDIVPLAKRYAEEGADEL--VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-- 82 E + D + GAD + F V K + + + + G Sbjct: 62 EDVTDP-SFRRLCKHYGADIVFTEFISSDGLIRHAVKSKRKLDVFDDERPVAIQIFGNQI 120 Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 +E A + G D I IN A Q ++ DA + Sbjct: 121 EPMVEAAQMAEAAGPDFIDINYGCPAKKVAGKGAGSGLLCQPD--LMEKITDAVVKAVRL 178 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH 201 LD V+ ++ G + ++ + + G D + + +EV Sbjct: 179 PVTAKTRIGWDERSISILDTVRRLEGCGIQALSIHGRTRAQMYKGRADWSWIARAKEVAT 238 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +P+I +G T E F + VDG + E K + T Sbjct: 239 IPIIGNGDIWTAEDAKRMFDETGVDGVMIGRGAIGNPFLFREAKHLIQTGE 289 Score = 82.8 bits (203), Expect = 9e-15, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 3/157 (1%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 VR K + I I+ +R G L + T + + D SW++R Sbjct: 176 VRLPVTAKTRIGWDERSIS-ILDTVRRLEGCGIQALSIHGRTRAQMYKGRADWSWIARAK 234 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 EV IP G I + EDA ++ G D + I A+ +P L + Sbjct: 235 EVATIPIIGNGDIWTAEDAKRMFDETGVDGVMIGRGAIGNPFLFREAKHLIQTGEHLPQA 294 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 H+ + + + Sbjct: 295 THRERVAVAIRHLEMSLERKGEKYGVLEMRRHYSTYL 331 >UniRef50_D1BLD4 TIM-barrel protein, nifR3 family n=12 Tax=cellular organisms RepID=D1BLD4_VEIPT Length = 328 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 63/223 (28%), Gaps = 11/223 (4%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED----AAK 91 E GA + + + + G + E A Sbjct: 33 LAKEHGAALVCTEMVSAMGIKYKNERTHELLRIEDVERPVSMQIFG--SNPEAIALGAKV 90 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + + GAD + IN + + + E V Sbjct: 91 VANAGADIVDINMGCPVKKVVTSGDGSALMKNPDLAARVAEAAVEAVDVPVTV--KMRIG 148 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 +D+ + ++ G I ++ ++ + +G D +K V+E VP++ +G Sbjct: 149 WDSDSINVVDFAKRIESTGVAAIAVHGRTKEQMYSGHADWSYIKAVKEAVSVPVLGNGDI 208 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 E + + D + G + YLAT V Sbjct: 209 VEPEDAKQMLDETGCDAVMVGRGAQGNPWIFGRIHHYLATGEV 251 Score = 90.9 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 55/179 (30%), Gaps = 3/179 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + ++V AKR G + + T D S++ V E + Sbjct: 140 PVTVKMRIGWDS-DSINVVDFAKRIESTGVAAIAVHGRTKEQMYSGHADWSYIKAVKEAV 198 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +P G I EDA ++L G D + + A +P + R+ ++ G Sbjct: 199 SVPVLGNGDIVEPEDAKQMLDETGCDAVMVGRGAQGNPWIFGRIHHYLATGEVLPGPTDI 258 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 + H + + + ++ N +N + E Sbjct: 259 ERLDMLLKHFDLLCQYKGEGMAVKEIRTHAGWYMKGLPESAYWRNRVNTIQTVTSFHNE 317 >UniRef50_B7GFK6 tRNA-dihydrouridine synthase n=211 Tax=Bacteria RepID=B7GFK6_ANOFW Length = 351 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 67/240 (27%), Gaps = 15/240 (6%) Query: 29 IGDIVPLAKRY-----------AEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDI 75 I + V LA E GA + A + + Sbjct: 27 INNPVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVSDKAILFNNPKTMGMLYIDEREKPL 86 Query: 76 PFCVAGGIK-SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + GG K +L AAK + + I+ IT+ I Sbjct: 87 SLQIFGGEKETLVQAAKYVDQHTNADIIDINMGCPVPKITKCDAGAKWLLDPNKIYDMVA 146 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 A ++ Q V++ G + ++ + + G D + Sbjct: 147 AVVDAVEKPVTVKMRIGWDENHIYAVENAQAVERAGGQAVAVHGRTRVQMYEGKADWNVI 206 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 K+V+E +P+I +G T + VDG + I YL T + Sbjct: 207 KQVKEAVRIPVIGNGDVQTPQDAKRMLEQTGVDGVMIGRAALGNPWMIYRTVRYLETGEL 266 Score = 83.2 bits (204), Expect = 7e-15, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 4/116 (3%) Query: 8 PCLD-VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSW 65 +D V VK + I V A+ G + + T D + Sbjct: 147 AVVDAVEKPVTVKMRIGWDENHIY-AVENAQAVERAGGQAVAVHGRTRVQMYEGKADWNV 205 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRF 120 + +V E + IP G +++ +DA ++L G D + I AL +P +I R Sbjct: 206 IKQVKEAVRIPVIGNGDVQTPQDAKRMLEQTGVDGVMIGRAALGNPWMIYRTVRYL 261 >UniRef50_Q6F288 TRNA dihydrouridine synthetase n=3 Tax=Mollicutes RepID=Q6F288_MESFL Length = 325 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 76/239 (31%), Gaps = 7/239 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIP 76 K VQ + L E+GAD + + + S ++ + + Sbjct: 11 KLVQGPMAGVSNPPFRL--ISKEKGADLVCAEMVSVEGMTHNNKKTFSMLAVEKKEHPMS 68 Query: 77 FCVAG-GIKSLEDAAKILSFGADKISIN-SPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + G ++S A K + D I+ + P + R A + I Sbjct: 69 MQIFGNDVESFIVATKWIDENVDCDIIDLNIGCPAPKVAVRSASGSSLLKTPELIYDIVK 128 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 A ++ + ++K GA I ++ + +G D E++ Sbjct: 129 AVVENTSKPVTAKIRLGWDKESVNAVEVSKLIEKAGASGITVHGRTRSEFYSGHADWEKI 188 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 K+V+E ++P+I +G DG + + E+ +L T Sbjct: 189 KEVKEAVNIPVIGNGDVIDGPSAKAMLELTGCDGVMISRGCQGNPWIFREIAHFLETGE 247 >UniRef50_A9A4W7 Putative TIM-barrel protein, nifR3 family n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A4W7_NITMS Length = 320 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 68/222 (30%), Gaps = 12/222 (5%) Query: 39 YAEEGADEL-----VFYDITASSDGRVVDKSWVSRVAE----VIDIPFCVAG-GIKSLED 88 + GA + + I A + + + E I + G + +LE Sbjct: 26 CKKMGAGLVVTEFTSIHSIIAKEEQLKENMKTIQEFIEFSEQERPISVQLFGSDLYALEK 85 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AA I+ D I N A + + K V Sbjct: 86 AATIVEPYFDIIDYNMGCPAPHITQQMAGGALLQEVNLTQQIFETLVNAVKKPVTLK-IR 144 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIAS 207 T +++ D + + +G I + +G D + +K+++E+ ++P++ + Sbjct: 145 SGVTDASKFLFRDIAEIAEDQGIQMITFHPRTVSQGYSGSADWKLIKELKEISNIPVVGN 204 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G T E + D + ++ YL Sbjct: 205 GDITTPEDAKMMLDETGCDYVMIGRGAMGNPFLFEQINDYLK 246 Score = 80.5 bits (197), Expect = 4e-14, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 2/111 (1%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V+ +K +A+ ++G + F+ T S D + + Sbjct: 135 VKKPVTLKIRSGVTDASKFLFRDIAEIAEDQGIQMITFHPRTVSQGYSGSADWKLIKELK 194 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRF 120 E+ +IP G I + EDA +L G D + I A+ +P L ++ D Sbjct: 195 EISNIPVVGNGDITTPEDAKMMLDETGCDYVMIGRGAMGNPFLFEQINDYL 245 >UniRef50_B8FGI4 TIM-barrel protein, nifR3 family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGI4_DESAA Length = 332 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 63/223 (28%), Gaps = 9/223 (4%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDAAKI 92 GA + + ++ E + + G G+ + A + Sbjct: 29 MAKRHGAALVCSEMISSNGLIRYQKKTMELMASKEEERPLSIQIFGSDPGVL-ADSARIV 87 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 GAD + IN L + + S Sbjct: 88 AEHGADIVDINFGCSVKKVLKGGAGSALMADLPRAEKILKEVRKA--ISLPFTIKMRSGW 145 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAG 211 + E + + Q G + L+ +G+ D Q+K++++ +P+I +G Sbjct: 146 DASGDEAMALGRIAQDAGVDAVALHPRTAKQGFSGHSDWSQIKRLKQELTIPVIGNGDVT 205 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 EH LE DG + + L + +E Sbjct: 206 KPEHVLEMMEQTGCDGVMIGRAVLYAPWIFRQALCLLENRPME 248 Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 43/124 (34%), Gaps = 5/124 (4%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VD 62 K + + + +K + + + L + + G D + + TA D Sbjct: 127 KEVRKAISL--PFTIKMRSGWDA-SGDEAMALGRIAQDAGVDAVALHPRTAKQGFSGHSD 183 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFG 121 S + R+ + + IP G + E +++ G D + I L P + + Sbjct: 184 WSQIKRLKQELTIPVIGNGDVTKPEHVLEMMEQTGCDGVMIGRAVLYAPWIFRQALCLLE 243 Query: 122 VQCI 125 + + Sbjct: 244 NRPM 247 >UniRef50_Q1N2Y7 HisF protein n=1 Tax=Bermanella marisrubri RepID=Q1N2Y7_9GAMM Length = 223 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 118/230 (51%), Gaps = 8/230 (3%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 +GD + K ++ ADE+V DI A+ R ++ + R++ +P + GG+ +LED Sbjct: 2 VGDAITNVKVFSSRKADEMVIVDIEATEKKR-INLPLLKRLSSHCIMPLTIGGGVTTLED 60 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + S GADK+ +NS P ++T ++ +FG Q + + K Sbjct: 61 AEDLFSVGADKVLVNSAFYNRPEILTDISSKFGRQA------VVFSLDVMKKSNEYVPVS 114 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 ++ + W + V+ + GAGEI+LN ++ DG+ G+DL K+V ++ VP++ +G Sbjct: 115 KNGSVKQSWTLRETVERAIEYGAGEIILNSVDCDGMMQGFDLNLCKQVSDISSVPVVIAG 174 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC 258 G GT E + ++ D A S+F+ +I +K Y+ G+E+R+ Sbjct: 175 GCGTKEDCV-LAVNSGADAVAAGSIFYWVGESILTIKDYMNKNGLEVRLL 223 >UniRef50_Q54CU9 tRNA-dihydrouridine synthase 3-like n=1 Tax=Dictyostelium discoideum RepID=DUS3L_DICDI Length = 671 Score = 107 bits (268), Expect = 3e-22, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 8/216 (3%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE-DAAKIL 93 + GAD + T +G + + + R + G A+ + Sbjct: 341 RICKRLGADITIGEMALTTKLLEGTKSELALLKRHPCEDKFGVQICGSYVDAAVKCAEFI 400 Query: 94 SF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 AD + INS D + ++ + Sbjct: 401 ENEIDADFVDINSGCPIDLVCNMGAGAALMERPK--KVEQLLRGISSSLSCPTTIKIRIG 458 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 + + + GA + L+ ++ + + + +K+ EV +PLI +G Sbjct: 459 KSEDAPTAHKLIPSLGEWGACAVTLHGRSRAQRYSRLANWDYVKQCSEVSSIPLIGNGDI 518 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + + + V + A + E+K Sbjct: 519 YNYQDVVNIYDSSKVSSIMIARGALIKPWIFTEIKE 554 >UniRef50_C1E1T8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E1T8_9CHLO Length = 662 Score = 107 bits (267), Expect = 4e-22, Method: Composition-based stats. Identities = 26/220 (11%), Positives = 59/220 (26%), Gaps = 12/220 (5%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-LEDAAKIL 93 + G D +T G+ + + + R V GG + ++L Sbjct: 322 RICKRYGVDITCGEMAMVTNLLQGQPAEWALLRRHPSEDIFGAQVCGGYSDSMSRCMQLL 381 Query: 94 SF------GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 G D I IN D + + A Sbjct: 382 EDEVVSKGGLDFIDINMGCPIDLVCNKGAGSMLLEKPARMEQLVRASAPL--LSCPLTLK 439 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 + + + ++ G + L+ ++ + D + + + + LI Sbjct: 440 TRMGYFDNKRVAHEIIPKMVDWGLAGMTLHGRSRQQRYSRLADWDYINQCARASPIQLIG 499 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +G + +++ V + A + E+K Sbjct: 500 NGDVFSYHDYVKNVEGQGVATCMIARGALIKPWIFTEIKE 539 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 3/108 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + + G + + + R+ D ++++ A I Sbjct: 439 KTRMGYFDNKRV-AHEIIPKMVDWGLAGMTLHGRSRQQRYSRLADWDYINQCARASPIQL 497 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 G + S D K + G I AL P + T + +R Sbjct: 498 IGNGDVFSYHDYVKNVEGQGVATCMIARGALIKPWIFTEIKERRDWDI 545 >UniRef50_Q2N6D2 Imidazoleglycerol-phosphate synthase, cyclase subunit n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2N6D2_ERYLH Length = 264 Score = 107 bits (267), Expect = 4e-22, Method: Composition-based stats. Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 6/220 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M RIIP L + VK QF+ IGDIV A+ + + ADEL+ DI Sbjct: 1 MRRLRIIPVLLLDGTSAVKTHQFKPARYIGDIVNAAQIFNSKMADELIVVDI-GYHQDNP 59 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + +AE +P GGI S+++AA + G +K+SIN+ + L+ A +F Sbjct: 60 SRPEVIRHLAEECFMPLAFGGGISSVDEAAALFKDGIEKVSINTAFVEGGALVEEAARQF 119 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 G Q +V ID + + TR + ++ + + +GAGEI++ ++ Sbjct: 120 GSQSVVASIDARRE-----ADGSYQVYSRGGTRALGIDPVEMARRAEAQGAGEILIQSID 174 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 +DG+R GYD ++ + + +P++A GGA T++ + Sbjct: 175 RDGMRKGYDRNLVRSIVDATTLPVVALGGADTVDDLAQVI 214 >UniRef50_P37567 Probable tRNA-dihydrouridine synthase 1 n=19 Tax=Bacilli RepID=DUS1_BACSU Length = 333 Score = 107 bits (267), Expect = 4e-22, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 64/218 (29%), Gaps = 4/218 (1%) Query: 40 AEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK-SLEDAAKILSFG 96 E GA + A + + + GG K +L +AAK + Sbjct: 31 KEFGAGLVCAEMVSDKAILYNNARTMGMLYIDEREKPLSLQIFGGKKETLVEAAKFVDQN 90 Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 I+ IT+ I A + Sbjct: 91 TTADIIDINMGCPVPKITKCDAGAKWLLDPDKIYEMVSAVVDAVNKPVTVKMRMGWDEDH 150 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEH 215 + Q V++ G + L+ + + G + + +K+V++ +P+I +G T + Sbjct: 151 IFAVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDIIKEVKQSVSIPVIGNGDVKTPQD 210 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + VDG + I YL T + Sbjct: 211 AKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGKL 248 Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 66/202 (32%), Gaps = 9/202 (4%) Query: 8 PCLD-VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSW 65 +D V VK + + I V A+ G + + T + Sbjct: 129 AVVDAVNKPVTVKMRMGWDEDHIF-AVKNAQAVERAGGKAVALHGRTRVQMYEGTANWDI 187 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQC 124 + V + + IP G +K+ +DA ++L G D + I AL +P +I R Sbjct: 188 IKEVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTVQYLETGK 247 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + K H+++ + + + + N ++ + Sbjct: 248 LKEEPQVREKMAVCKLHLDRLIDLKGENVAVREMRKHAAWYL-----KGVKGNANVRNEI 302 Query: 185 RNGYDLEQLKKVREVCHVPLIA 206 + E+ ++ + V + A Sbjct: 303 NHCETREEFVQLLDAFTVEVEA 324 >UniRef50_A8NZY7 tRNA-dihydrouridine synthase 3 n=2 Tax=Agaricales RepID=DUS3_COPC7 Length = 676 Score = 107 bits (266), Expect = 6e-22, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 60/252 (23%), Gaps = 24/252 (9%) Query: 19 KGVQFRNHEIIGDIVPLA------KRYAEEGADELVFYDI--TASSDGRVVDKSWVSRVA 70 K + + + + GAD T+ G + S V R Sbjct: 304 KRRLDWKGKTYLAPLTTVGNLPFRRMCVKLGADITCGEMGLATSFLAGSKEEWSLVRRHP 363 Query: 71 EVIDIPFCVAGG-----IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 VAG + + E AK G D + +N D Sbjct: 364 SEKIFGIQVAGNKPHTLVPTAEVIAKEFPTGVDFVDLNCGCPIDLVFKAGSGSALLDNAG 423 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 +G + + A I L+ + Sbjct: 424 KLGKIIQGMNRALGEIPLTVKIRTGVKEGRNNAHKLMPRISAEWSASAITLHGRTRQQRY 483 Query: 186 NG-YDLEQLKKVREV----------CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 D + +K+ VP+ G + + + E + VDG + Sbjct: 484 TKLADWDYIKECVAAVRAREADEDLPPVPIFGGGDCFSSQDYWEKINNYGVDGVMIGRGA 543 Query: 235 HKQIINIGELKA 246 + E+K Sbjct: 544 LIKPWIFTEIKE 555 >UniRef50_A6Y2G9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 2 n=4 Tax=Vibrio RepID=A6Y2G9_VIBCH Length = 262 Score = 106 bits (265), Expect = 6e-22, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 97/261 (37%), Gaps = 20/261 (7%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRN--------HEIIGDIVPLAKRYAEEGADELVFYDI 52 M ++ P +D+ G+ + + +G++ +A+ + + GA + D+ Sbjct: 1 MEEFKLYPSIDIVGGKALTSRSAIDITLGITEEKTYLGEVFEVAELHFQSGAKWIHIVDL 60 Query: 53 TASSDGRVVDKSWVSRVAEVI--DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 A+ G ++ + + + + V GGI+S E + + G +++I+S P Sbjct: 61 DAA-SGVGSNQRLIMDLVKHFSEKVQTQVCGGIRSNEILEQYILAGCSRVNISSMIFDKP 119 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 L +L ++G + + + E Q + + G Sbjct: 120 KLCEKLLKKYGEKIAIALDVKLVNQEYKLATR--------GWNTLQGNLWTTLDWLDNSG 171 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 VL +++ G N + L++V P+I+ GG +++ ++GA+ Sbjct: 172 CQRYVLTDVDRGGSLNHPNFSLLEQVLTKTSTPIISGGGLCSLDDIDR-LYQIGIEGAVL 230 Query: 231 ASVFHKQIINIGELKAYLATQ 251 + H Q + Y+ Sbjct: 231 GQLIHTQQHQLKRFLQYVQQN 251 >UniRef50_A1WSE3 Histidine biosynthesis n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WSE3_VEREI Length = 229 Score = 106 bits (265), Expect = 6e-22, Method: Composition-based stats. Identities = 80/218 (36%), Positives = 118/218 (54%), Gaps = 6/218 (2%) Query: 39 YAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD 98 Y +GADELVF DI AS R + R A+ I +P V GGI+SL D +L GAD Sbjct: 17 YYSQGADELVFMDIVASLYQRNNLAGIIERAADQIYVPITVGGGIRSLHDVRTMLCSGAD 76 Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 K++IN+ A+A P LI +++RFG QC+V+ ++ + G ++ T + Sbjct: 77 KVAINTAAVARPGLIAEVSERFGSQCMVLSVEAKRKSGGGWEA-----FVDNGREHTGLD 131 Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + WV++ GAGEI+L ++Q+G R G+D++ ++ V VP+IASGG G + Sbjct: 132 VVAWVRQAVALGAGEIMLTSVDQEGTRKGFDVDLVRTVAGCVTVPIIASGGYGRPSDLQQ 191 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 A A G A H Q I ELKA+ G+E+R Sbjct: 192 AAE-AGASGLAIADALHWQRATIAELKAHARAAGLEVR 228 >UniRef50_Q4DCG2 Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi RepID=Q4DCG2_TRYCR Length = 529 Score = 106 bits (265), Expect = 7e-22, Method: Composition-based stats. Identities = 25/221 (11%), Positives = 58/221 (26%), Gaps = 14/221 (6%) Query: 37 KRYAEEGADELV-----FYDITASSDGRVVDKSWVSRVAEV-IDIPFCVAGGIKSLEDAA 90 + GAD V +++ G + S + R + +S + A Sbjct: 187 RVCKSYGADITVSSMSLVHNLNRLQKG---EWSLLRRHESEDVFGLQIAVSQPQSAQTWA 243 Query: 91 KILSFG---ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 K + D I IN + + D + Sbjct: 244 KAIEASGYSYDFIDINCGCPVQMIMSAGCGCGLWERRDNRLRDIVSSLVQHQSKPVSIKC 303 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 + + + + + GA + ++ + + E + +P+I Sbjct: 304 RIGAGANSSASLHEKIGDYEGWGADAVTIHGRFRAQRYTKLANWEYIDSCAARTSLPVIG 363 Query: 207 SGGAGTMEHFLEAFR-DADVDGALAASVFHKQIINIGELKA 246 +G + E ++ V + + E+K Sbjct: 364 NGDIFSYEDIIDHRERYPHVSSYMIGRGALIKPWIFEEIKQ 404 Score = 70.1 bits (170), Expect = 6e-11, Method: Composition-based stats. Identities = 17/166 (10%), Positives = 38/166 (22%), Gaps = 3/166 (1%) Query: 14 DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEV 72 +K + Y GAD + + + ++ + ++ A Sbjct: 297 KPVSIKCRIGAGANSSASLHEKIGDYEGWGADAVTIHGRFRAQRYTKLANWEYIDSCAAR 356 Query: 73 IDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 +P G I S ED I AL P + + Sbjct: 357 TSLPVIGNGDIFSYEDIIDHRERYPHVSSYMIGRGALIKPWIFEEIKQEQPRDISSQERF 416 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + + + + ++ + G + Sbjct: 417 EMLRSFCNYGLSHWGSDERGVLTTRRFLCEWLSFLCRYVPLGLLEC 462 >UniRef50_UPI000058804E PREDICTED: similar to MGC53781 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI000058804E Length = 655 Score = 106 bits (264), Expect = 7e-22, Method: Composition-based stats. Identities = 28/213 (13%), Positives = 62/213 (29%), Gaps = 5/213 (2%) Query: 39 YAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKILSF 95 + GAD T G+ + + + R + GG ++ A++L+ Sbjct: 301 CKKLGADITCGEMAMCTNLLQGQSSEWALLRRHPSEDIFGVQLCGGFPDTMTRCAELLND 360 Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 D I+ L+ G+ + + + + Sbjct: 361 RLDIDFIDINVGCPIDLVYHKGAGSGLMNRMGKFQEIVRGMSSVLDIPLTVKMRTGVHND 420 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTM 213 V+ + GA + ++ ++ + D + LK + P I +G + Sbjct: 421 NPVAHKIVRRIYDWGASVVTVHGRTREQRYSKLADWDYLKDCVQAADPHPFIGNGDILSY 480 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 E + G + A + E+K Sbjct: 481 EDSNFFREQSGATGQMIARGALIKPWIFTEIKE 513 Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 10/141 (7%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASS-DGRVVDKSW 65 LD+ VK + V + +R + GA + + T ++ D + Sbjct: 404 VLDI--PLTVKMRTG---VHNDNPVAHKIVRRIYDWGASVVTVHGRTREQRYSKLADWDY 458 Query: 66 VSRVAEVI-DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 + + PF G I S ED+ GA I AL P + T + ++ Sbjct: 459 LKDCVQAADPHPFIGNGDILSYEDSNFFREQSGATGQMIARGALIKPWIFTEIKEQRHWD 518 Query: 124 CIVVGIDTWYDAETGKYHVNQ 144 ++ Sbjct: 519 ISSSERFDILQDYINLGLLHW 539 >UniRef50_C6JNK3 Dihydrouridine-tRNA ligase n=4 Tax=Fusobacterium RepID=C6JNK3_FUSVA Length = 320 Score = 106 bits (264), Expect = 8e-22, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 2/193 (1%) Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + R+ E + K +E A + S G I INS + Sbjct: 46 TLKVILRLREGDSVQLFGKDIKKMVESAKFVESLGVKHIDINSGCPMKKIVNNGYGAALM 105 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 Q +V + + ++ ++ + Q+ G I ++ + Sbjct: 106 EQPELVKAMLSEVRSALNDKTDLSIKIRVGYKESK-NPVEIAKIAQETGCKHITIHGRTR 164 Query: 182 DGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + + G D +K+V+E +P+I +G T E E + VDG + A Sbjct: 165 EQMYTGKADWSIIKEVKESVDIPVIGNGDIFTAEDAKERVDYSGVDGIMLARGIFGNPWL 224 Query: 241 IGELKAYLATQGV 253 I +++ Y + Sbjct: 225 IRDIREYFEYGKI 237 Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 56/168 (33%), Gaps = 5/168 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML+ + L+ + +K + V +AK E G + + T Sbjct: 114 MLS-EVRSALNDKTDLSIKIRVGYKE--SKNPVEIAKIAQETGCKHITIHGRTREQMYTG 170 Query: 61 -VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLAD 118 D S + V E +DIP G I + EDA + + + G D I + +P LI + + Sbjct: 171 KADWSIIKEVKESVDIPVIGNGDIFTAEDAKERVDYSGVDGIMLARGIFGNPWLIRDIRE 230 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 F I+ + + H + + + Sbjct: 231 YFEYGKILHPVTDIEKIDMAIKHTKRTEVEHPERPFIFELRKHLCWYL 278 >UniRef50_A8ZYE4 Putative TIM-barrel protein, nifR3 family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYE4_DESOH Length = 326 Score = 106 bits (264), Expect = 9e-22, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 53/223 (23%), Gaps = 7/223 (3%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG--IKSLEDAAKI 92 + G + + + E + GG AA + Sbjct: 27 RLAKAAGCALVYSEMVSSHGLFYQSEKTGAMLRTTPEEAPFAVQIFGGKPAVMGRAAAMV 86 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + GA I IN L + A + S Sbjct: 87 QASGAHMIDINFGCSVKKILKSGAGAALMKDLP--LAAEVIQAVRDAVSIPLTIKMRSGW 144 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 + + + RG + L+ G D + +++ +P+I +G Sbjct: 145 NPDGSDAFHLAEIAEARGVNAVALHPRTATQGFGGTADWSLIAALKQRTGLPVIGNGDIV 204 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 E D + ++ A LA + V Sbjct: 205 LPEDARRMLDQTGCDAVMVGRAAIGAPWIFKQINACLAGKPVV 247 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 52/159 (32%), Gaps = 4/159 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 +K N D LA+ G + + + TA+ D S ++ + + Sbjct: 135 PLTIKMRSGWN-PDGSDAFHLAEIAEARGVNAVALHPRTATQGFGGTADWSLIAALKQRT 193 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGI-DT 131 +P G I EDA ++L G D + + A+ P + ++ + +V + Sbjct: 194 GLPVIGNGDIVLPEDARRMLDQTGCDAVMVGRAAIGAPWIFKQINACLAGKPVVEPSLEH 253 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 ++ + + E L W G Sbjct: 254 RFEVMSEYINAMVAHYGEDLACRVMRSRLGWFTRAMPHG 292 >UniRef50_Q2YZ70 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=60 Tax=Staphylococcus RepID=HIS4_STAAB Length = 234 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 78/240 (32%), Gaps = 24/240 (10%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAE--------EGADELVFYDITAS 55 + P +D+ V+ + + +++ E E + + D+ + Sbjct: 2 IELWPAIDLIGSTSVRLTEGKYDSE----EKMSRSAEESIAYYSQFECVNRIHIVDLIGA 57 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + ++ + + V GGI++ + G + + + + D + Sbjct: 58 KAQHAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYCIVGTKGIQDTDWLKE 117 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 +A F + + T+ +V+++ G I+ Sbjct: 118 MAHTFPGRIYFSV-----------DAYGEDIKVNGWEEDTELNLFSFVKQLSDIPLGGII 166 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + +DG +G + E ++ + +P+IASGG + +V A+ H Sbjct: 167 YTHIAKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQR-LASLNVHAAIIGKAAH 225 >UniRef50_Q55724 Probable tRNA-dihydrouridine synthase 1 n=34 Tax=Cyanobacteria RepID=DUS1_SYNY3 Length = 355 Score = 105 bits (263), Expect = 1e-21, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 62/175 (35%), Gaps = 5/175 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRV 60 + K ++ +DV VK + I +IV A+R + GA L + T + Sbjct: 156 IVKTVVAAVDV--PVTVKTRLGWDDGEI-NIVEFAQRLQDAGAQMLTLHGRTRAQGYNGR 212 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADR 119 W+++V + + IP G I S+E A L GAD + + +L P L+ + Sbjct: 213 ARWQWIAKVKQALTIPVIANGDIFSVEAAIACLEETGADGVMCSRGSLGYPFLVGEIEHF 272 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 F + H+ + + + Q GA + Sbjct: 273 FKTGEKRKAPTVAEKLTCAQEHLQMLWEYKGQRGLFQARKHLAWYCKDFPGAAAL 327 Score = 93.6 bits (231), Expect = 6e-18, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 68/212 (32%), Gaps = 6/212 (2%) Query: 45 DELVFYDITASSDGRVVDKSWVSRV-AEVIDIPFCVAGGIKS--LEDAAKILSFGADKIS 101 L ++A+ + V + I + E A K ++ GA + Sbjct: 68 AMLYTEMVSATEIHHLRTLPQVMEIDPRENPISIQLFDCRPDFMAEAAQKAVAQGAQSVD 127 Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 IN + Q + V + ++ Sbjct: 128 INMGCPVNKITKKGGGSSLLRQPA--VAEAIVKTVVAAVDVPVTVKTRLGWDDGEINIVE 185 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + Q +Q GA + L+ + NG + + KV++ +P+IA+G ++E + Sbjct: 186 FAQRLQDAGAQMLTLHGRTRAQGYNGRARWQWIAKVKQALTIPVIANGDIFSVEAAIACL 245 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLATQG 252 + DG + + +GE++ + T Sbjct: 246 EETGADGVMCSRGSLGYPFLVGEIEHFFKTGE 277 >UniRef50_UPI000038E352 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E352 Length = 229 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 27/244 (11%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAE-EGADELVFYDITASSDGRVVD 62 I P +D+ +G+ V + + GD V A+ ++ G +L D+ + G + Sbjct: 4 IYPAIDIYNGEAVSLENGKIEKIESFGDPVKFAQEFSSISG--KLHIVDLNGAFTGNPAN 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + + + + GG +++E S G D I I + +L Sbjct: 62 TNLIKNIRKNVKSFMQAGGGYRTMESIEAGYSLGIDSIIIGTASL--------------D 107 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + I+ + + T + + + K A + +N D Sbjct: 108 KKILEEVSEKHKNITISIDAYNGYIKYNGWADGTEISYRDFYSMVKGRANRFIFTAINSD 167 Query: 183 GVRNGYDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G + ++ + + +GG +++ + + +GA+ + I I Sbjct: 168 GTG------HISRIEKFWDEGYFMYAGGVNSIDDLKK-LENMGFNGAIIGKALYNGNIKI 220 Query: 242 GELK 245 ELK Sbjct: 221 EELK 224 >UniRef50_C7RGQ7 TIM-barrel protein, nifR3 family n=4 Tax=Anaerococcus RepID=C7RGQ7_ANAPD Length = 326 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 24/222 (10%), Positives = 65/222 (29%), Gaps = 7/222 (3%) Query: 37 KRYAEEGAD--ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDAAK 91 + E G D + A + + + + G I Sbjct: 25 QICEENGCDKTFTEMVSVNALDFNNRATEEIMYTAYSEKNCNIQIFGKDCDII-ERVIKD 83 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 ++ D I+ I + V + Sbjct: 84 KINPREDFEEISFNMGCPAPKIFNNGQGSALMRDVKKVYEIGKCLKESTDKIVNVKIRMG 143 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 ++ + ++ G ++L+ + +G + + ++K++E +P+IA+G Sbjct: 144 IDDDSVNYIEVGKALEDSGIDYVILHGRTRKQQYSGKANWQAIRKLKETLSIPVIANGDV 203 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +++ + + + DG + A ++K Y+ + Sbjct: 204 FSVKDYKDILDETGADGVMIARGAMGNPFIFRQIKDYIQGKE 245 Score = 80.1 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 3/108 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIP 76 VK + + + + + + K + G D ++ + T + + ++ E + IP Sbjct: 138 VKIRMGIDDDSV-NYIEVGKALEDSGIDYVILHGRTRKQQYSGKANWQAIRKLKETLSIP 196 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQ 123 G + S++D IL GAD + I A+ +P + ++ D + Sbjct: 197 VIANGDVFSVKDYKDILDETGADGVMIARGAMGNPFIFRQIKDYIQGK 244 >UniRef50_D0NNQ3 tRNA-dihydrouridine synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NNQ3_PHYIN Length = 377 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 76/245 (31%), Gaps = 24/245 (9%) Query: 18 VKGVQFRNHEIIGDIVPLA------------KRYAEEGADELV---FYDITASSDGRVVD 62 VK + + IG + + GAD + + + Sbjct: 10 VKLRGYDFYRAIGSPKRIVAPMVDQSELAFRMLCRKLGADCCYTPMLHSRLFA-ESAEYR 68 Query: 63 KSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + + G K++ AAK++ D + +N Sbjct: 69 EKMFEHHIQDRPLVVQFCGNDPKTVLAAAKMVEGHCDAVDLNLGCPQGIARKGHYGSFLM 128 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 V + +N + R ETL++ +Q+ G + ++ + Sbjct: 129 HDKETVKATVKTLS----AGLNIPVTVKIRVFPDDNETLEFADMLQEAGCDLLTVHGRTK 184 Query: 182 DGVRN---GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + + + + +++++E +P+IA+GG T E DG +++ + Sbjct: 185 EMNKTAVREVNWDIIRRIKERLTIPVIANGGIETHEDIARCLEATGCDGVMSSEGLLENP 244 Query: 239 INIGE 243 + Sbjct: 245 ALFAD 249 >UniRef50_C7H613 tRNA-dihydrouridine synthase n=3 Tax=Ruminococcaceae RepID=C7H613_9FIRM Length = 340 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 9/224 (4%) Query: 37 KRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAK 91 + A+ GA ++ +S G S + + G + + AA Sbjct: 66 RLMAQHGA-GFTVSEMVSSRALVYGDHKTVSLLKAEPNGAPYGVQIFGEVPEIMGQAAAA 124 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + + D + IN A + + + G + Sbjct: 125 VEQYAFDFLDINMGCPAPKIVSGGAGSKLMLDPDRCGR--IVEEVVKNTSRPVTVKMRKG 182 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGA 210 ++ + ++ GA I ++ ++ + G D + V++ HVP++ +G Sbjct: 183 WDAEHVTAVECAKACEQAGAVLIAVHARTREQMYTPGIDPSIIAAVKDAVHVPVLGNGDI 242 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 T E + + DG + A + A L Sbjct: 243 RTAEDAVRMVEETGCDGVMIARAALGDPWLFERVNAALEGLPRP 286 Score = 87.1 bits (214), Expect = 5e-16, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 3/115 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + + E + V AK + GA + + T +D S ++ V + + Sbjct: 174 PVTVKMRKGWDAEHVT-AVECAKACEQAGAVLIAVHARTREQMYTPGIDPSIIAAVKDAV 232 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVV 127 +P G I++ EDA +++ G D + I AL DP L R+ Sbjct: 233 HVPVLGNGDIRTAEDAVRMVEETGCDGVMIARAALGDPWLFERVNAALEGLPRPQ 287 >UniRef50_Q58114 Uncharacterized protein MJ0703 n=8 Tax=Methanococcales RepID=Y703_METJA Length = 226 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 87/258 (33%), Gaps = 43/258 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYDITA 54 +IIP +D++D V G E + + +AK Y E GA + D+ Sbjct: 1 MKIIPVIDLKDKIAVHGKSGNRDEYKPLESVICKSSNPIEVAKAYKERGAKTIYIADLN- 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA--KILSFGADKISINSPALADPTL 112 G + + + I V G+KS ED K + D+ + + L D L Sbjct: 60 FIMGNGDNFDIIKEI---DFINKIVDIGVKSREDLETIKKVLNKDDRAIVATETLKDIEL 116 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + + + + E + Sbjct: 117 LKEKDIVVSLDFKNGNLLNYSLDEILSCVRDDTP-------------------------- 150 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +++ ++ G + G + E +K V + + P+ GG ME E + VD L A+ Sbjct: 151 -LIILDISSVGTQRGVNAELIKYVLDKTNNPVYVGGGIKGMEDL-ELCYNLGVDAVLIAT 208 Query: 233 VFHKQIINIGELKAYLAT 250 HK ++++ E+ Sbjct: 209 AIHKGVLDLEEIINKFGD 226 >UniRef50_A2BSD9 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus str. AS9601 RepID=A2BSD9_PROMS Length = 254 Score = 104 bits (259), Expect = 3e-21, Method: Composition-based stats. Identities = 57/241 (23%), Positives = 114/241 (47%), Gaps = 8/241 (3%) Query: 1 MLA-KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDG 58 M R+I L + +++K +F+N++ +GD + + + + + DE+ Sbjct: 1 MKKHPRVILSLIIDSKRMIKRSKFKNYKYLGDPLNIIRIFNSKRVDEISIISCENYEKKD 60 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 +D ++ +++ P +GG++SLEDA K+ S G +KI I + +P +I ++A+ Sbjct: 61 INIDFEFLEKISGEAFCPLTYSGGVRSLEDADKLFSIGFEKIGIRNLLHTNPEVIKQIAE 120 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 ++G Q +V+ ID Y T+ + E + + GAGE+VL Sbjct: 121 KYGSQSVVIFIDYKELNNNEIEIYTSYNSFFKSTKSSILEFIKN---AESYGAGEVVLQS 177 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS--VFHK 236 + ++G G DL+ +K++ +P+I+S G + +AF DG +A+ + Sbjct: 178 ILREGQSKGLDLDIIKEITNKTILPIISSCGMRDLSDARKAF-SLGADGVMASKFFSLYG 236 Query: 237 Q 237 Sbjct: 237 N 237 >UniRef50_Q582L4 TRNA-dihydrouridine synthase 3, putative n=5 Tax=Trypanosomatidae RepID=Q582L4_9TRYP Length = 528 Score = 104 bits (259), Expect = 3e-21, Method: Composition-based stats. Identities = 25/220 (11%), Positives = 63/220 (28%), Gaps = 15/220 (6%) Query: 37 KRYAEEGADEL-----VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG----GIKSLE 87 + E GAD + +++ + S + R + +A + Sbjct: 183 RVCKEYGADITVGEMAIVHNLNRLQK---SEWSLLRRHSSEDIFGLQIAVSRPHDAITWA 239 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 A + F D + IN D +++ + D + Sbjct: 240 QAVEESGFSYDFVDINCGCPVDKVVLSGCGCGLWERKGNRLRDVVQSLVAHQ-SKPVTIK 298 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIA 206 E + + + GA + ++ ++ + + + +P+I Sbjct: 299 CRMGPDEENPELHKHIADYETWGAAAVTIHGRSRRQRYTKLANWSYIDNCASLTSLPVIG 358 Query: 207 SGGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELK 245 +G + E +E + +V + + E+K Sbjct: 359 NGDIFSCEDIVEHRAQSKNVSSFMIGRGALVKPWIFEEIK 398 >UniRef50_C8W3U6 TIM-barrel protein, nifR3 family n=8 Tax=Clostridia RepID=C8W3U6_DESAS Length = 322 Score = 104 bits (258), Expect = 4e-21, Method: Composition-based stats. Identities = 26/223 (11%), Positives = 56/223 (25%), Gaps = 8/223 (3%) Query: 38 RYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGG--IKSLEDAAKIL 93 E G + I+ A G + E I + G A+ Sbjct: 29 LAKEAGCGLVCTEMISDQALLYGNPKTNILLDCTGETPPISMQIFGSSPEYMARAASITE 88 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + GA I IN + + V Sbjct: 89 ARGASIIDINMGCPTPKIVKNGEGAALMRKPE--LAQKIISDVVQSVRVPVTVKIRKGWD 146 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 + ++ ++ GA + ++ + +G D + +K V++ +P+I +G Sbjct: 147 ESFPNAVEMALLAEEAGAKAVTVHGRTRSQFYSGKADWDIIKSVKKAVTIPVIGNGDIRE 206 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA-TQGVE 254 + D + +L + + Sbjct: 207 PRDAVRMLMHTGCDAVMIGRASLGNPWIFSSTVHFLDCGENLP 249 Score = 94.4 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 3/113 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 VR VK + + + V +A E GA + + T S D + V Sbjct: 133 VRVPVTVKIRKGWDESFP-NAVEMALLAEEAGAKAVTVHGRTRSQFYSGKADWDIIKSVK 191 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGV 122 + + IP G I+ DA ++L G D + I +L +P + + Sbjct: 192 KAVTIPVIGNGDIREPRDAVRMLMHTGCDAVMIGRASLGNPWIFSSTVHFLDC 244 >UniRef50_UPI00017B0A55 UPI00017B0A55 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A55 Length = 669 Score = 104 bits (258), Expect = 4e-21, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 71/241 (29%), Gaps = 18/241 (7%) Query: 19 KGVQFRNHEIIGDIVPLA------KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVA 70 K V F + + + + GAD T G+ + + + R Sbjct: 319 KQVNFNDKLYL--PLTTCGNLPFRRVCKRFGADITCGEMAMCTNLLQGQQSEWALLKRHE 376 Query: 71 EVIDIPFCVAG-GIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVV 127 + G ++ A++++ D + INS D + Sbjct: 377 SEDVFGVQIEGCFPDTMTRCAELINNNTEVDFVDINSGCPIDLVFKKGGGCGLMTR--TR 434 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + V + + + E++K G I L+ +++ Sbjct: 435 KFEEIVKGMNYVLDVPLTVKIRTGVQEKTNIAHKLIPEMKKWGVSMITLHGRSREQRYTK 494 Query: 188 -YDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 D + + + VPL +G + E + ++ V G + A + E+K Sbjct: 495 LADWDYISTCSKLASPVPLFGNGDILSYEDAM-MAKETGVSGIMIARGALIKPWIFTEIK 553 Query: 246 A 246 Sbjct: 554 E 554 Score = 76.7 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 47/168 (27%), Gaps = 5/168 (2%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVS 67 LDV VK + L + G + + + ++ D ++S Sbjct: 446 VLDV--PLTVKIRTGVQEKTNI-AHKLIPEMKKWGVSMITLHGRSREQRYTKLADWDYIS 502 Query: 68 RVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 ++ +P G I S EDA G I I AL P + T + ++ Sbjct: 503 TCSKLASPVPLFGNGDILSYEDAMMAKETGVSGIMIARGALIKPWIFTEIKEKRHWDISS 562 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 T + + + + + G + Sbjct: 563 GERLDILRDFTNFGLEHWGSDTRGVEKTRSFMLEWLSFMCRYIPVGLL 610 >UniRef50_UPI000186DAF4 tRNA-dihydrouridine synthase, putative n=2 Tax=Eumetazoa RepID=UPI000186DAF4 Length = 557 Score = 104 bits (258), Expect = 5e-21, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 61/218 (27%), Gaps = 10/218 (4%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDAAK 91 + E GAD T+ G + + + R + G + + Sbjct: 226 RICKEFGADITCSEMAMATSLLQGLKYEWALIKRHESEDLFGIQLCGNNPFVMTKCAQLL 285 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 S D I IN D + V+ ++ + + Sbjct: 286 EESTNVDYIDINLGCPIDLVYQKGGGSGLLRREKVLESVIKSMSKVMSLPLTV--KTRTG 343 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKV-REVCHVPLIASGG 209 + + G I ++ +++ D + + + +P+ +G Sbjct: 344 VYADKNVAHRLIPMFVDSGVSLITVHGRSREQRYTRTADWNYINECGKAASPIPVFGNGD 403 Query: 210 AGTMEHFLEAFRDAD-VDGALAASVFHKQIINIGELKA 246 + E + A ++ + V G + + E+K Sbjct: 404 VLSFEDYNRALKENNNVSGVMVGRGALYKPWIFKEIKE 441 >UniRef50_A3UE29 HisF (Cyclase) n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UE29_9RHOB Length = 261 Score = 103 bits (257), Expect = 5e-21, Method: Composition-based stats. Identities = 80/273 (29%), Positives = 126/273 (46%), Gaps = 28/273 (10%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA----SS 56 ML R+IP L + +GQ+V+ F H+IIGD + R+ E DEL++ DI+ + Sbjct: 1 MLMPRLIPVLLLMNGQLVRSETFTTHQIIGDPLHEVARFNEWKVDELIYLDISRTAGLAQ 60 Query: 57 DGRVV-------DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 R + VA +P G + SL+ I GADK++IN+ A Sbjct: 61 GRRDAGNRAYADAMDVLEAVASHCFMPLTWGGHVTSLDQVRDIFKRGADKVAINTAAYET 120 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 P LIT+++ RFG Q +VV ID + + T + + W +E + R Sbjct: 121 PDLITQVSKRFGAQAMVVSIDARQIENGYEV------MTQGGRTATGRDPVSWAKEAEDR 174 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 GAGEI+L +++DG GYD +++V + +P+IA G G EH+ + + Sbjct: 175 GAGEILLQSLDRDGRGTGYDTTLIEQVSQAVTIPVIACSGVGVYEHYAKGLKAGADA--- 231 Query: 230 AASVFHKQIINIGEL-----KAYLATQGVEIRI 257 V I + EL K L G ++R+ Sbjct: 232 ---VAAANIWHFKELADRGGKRALQRAGFDVRM 261 >UniRef50_Q3AZ67 Dihydrouridine synthase TIM-barrel protein nifR3 n=24 Tax=Cyanobacteria RepID=Q3AZ67_SYNS9 Length = 356 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 50/162 (30%), Gaps = 3/162 (1%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GA I IN +A + Sbjct: 115 QAGAFLIDINMGCPVRKIAKKGGGSGLIRDPN--LATQILEAVVDAVSIPVTVKTRLGWC 172 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 + + + W +++Q GA + L+ ++ G + + +V++ +P+IA+G + Sbjct: 173 GSSSDPITWCRQLQNAGAQMLTLHGRTREQGFKGQANWNAIAEVKQALTIPVIANGDINS 232 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 L DG + +G+++A + + Sbjct: 233 PTDALRCLEITGADGVMVGRGTMGSPWLVGQIEAAFMNRPIP 274 Score = 93.2 bits (230), Expect = 8e-18, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 3/165 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK D + ++ GA L + T + + + ++ V + + Sbjct: 162 PVTVKTRLGWCG-SSSDPITWCRQLQNAGAQMLTLHGRTREQGFKGQANWNAIAEVKQAL 220 Query: 74 DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 IP G I S DA + L GAD + + + P L+ ++ F + I D+ Sbjct: 221 TIPVIANGDINSPTDALRCLEITGADGVMVGRGTMGSPWLVGQIEAAFMNRPIPATPDSG 280 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 K ++ + GA ++ + Sbjct: 281 ARLHLAKEQLHDLVSSRGSHGLLIARKHMSWTCTGFPGAPQLRHS 325 >UniRef50_A9KHE5 TIM-barrel protein, nifR3 family n=2 Tax=Clostridiales RepID=A9KHE5_CLOPH Length = 324 Score = 103 bits (256), Expect = 6e-21, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 66/221 (29%), Gaps = 7/221 (3%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILS 94 E+GAD + + + + + + G + + AK + Sbjct: 30 LCKEQGADLIYTEMVSAKGIYYNNKNTEVLLEVEEKERPVALQLFGEDPYIMSEMAKRIE 89 Query: 95 F-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 D + IN + ++ +G A + Sbjct: 90 HRNFDFLDINMGCPVPKVVNNGEGSALMLKPERIGE--IVSAISKAIKKPVTVKIRKGFT 147 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 ++ + +++ G I ++ ++ +G D + +K V+E +P+I +G T Sbjct: 148 KDNINAVEVAKVIEQSGGAAIAVHGRTREQYYSGEADWDIIKAVKEAVSIPVIGNGDVQT 207 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 E D + A + K YL T + Sbjct: 208 PEDVKRMMSYTGCDAVMIARGVRGNPWFFSQAKHYLNTGEI 248 Score = 92.5 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 9/129 (6%) Query: 1 MLAKR----IIPCLD--VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA 54 ML I+ + ++ VK + + + V +AK + G + + T Sbjct: 117 MLKPERIGEIVSAISKAIKKPVTVKIRKG-FTKDNINAVEVAKVIEQSGGAAIAVHGRTR 175 Query: 55 SSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTL 112 D + V E + IP G +++ ED +++S+ G D + I +P Sbjct: 176 EQYYSGEADWDIIKAVKEAVSIPVIGNGDVQTPEDVKRMMSYTGCDAVMIARGVRGNPWF 235 Query: 113 ITRLADRFG 121 ++ Sbjct: 236 FSQAKHYLN 244 >UniRef50_C1F4Z7 Putative tRNA-dihydrouridine synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4Z7_ACIC5 Length = 398 Score = 103 bits (256), Expect = 7e-21, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 5/180 (2%) Query: 71 EVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 + I + G E A + G D + +N A + Sbjct: 108 DEHPIAAQLFGSNPETLAEGARIVEDTGFDMVDLNLGCPAKRVVACNGGSGLLRDLP--L 165 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 I ++A G + + + ++ G + L+ ++ +G Sbjct: 166 IAKIFEAVRGAVKIPFTVKFRLGWNDQHIICVPLARLAEESGLNAVSLHARTREQGYSGQ 225 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 E + +V++ +P+I +G T E DG + ++ Y Sbjct: 226 ARWEHIAEVKDAVRIPVIGNGDVRTPEDACALVAKTGCDGVMIGRAAPANPWIFRQIAQY 285 Score = 82.1 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 3/110 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V+ VK N + I VPLA+ E G + + + T ++ V Sbjct: 177 VKIPFTVKFRLGWNDQHII-CVPLARLAEESGLNAVSLHARTREQGYSGQARWEHIAEVK 235 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADR 119 + + IP G +++ EDA +++ G D + I A A+P + ++A Sbjct: 236 DAVRIPVIGNGDVRTPEDACALVAKTGCDGVMIGRAAPANPWIFRQIAQY 285 >UniRef50_B9WJS1 Imidazole glycerol phosphate synthase [includes: glutamine amidotransferase; cyclase], putative n=6 Tax=cellular organisms RepID=B9WJS1_CANDC Length = 622 Score = 103 bits (256), Expect = 7e-21, Method: Composition-based stats. Identities = 79/330 (23%), Positives = 130/330 (39%), Gaps = 75/330 (22%) Query: 2 LAKRIIPCLDVR---DGQVVKGVQFRNH-------------------EIIGDIVPLAKRY 39 L +RII CLDVR DG +V + + +G V LA +Y Sbjct: 288 LTRRIIACLDVRTNDDGDLV-VTKGDQYNVREQQSSSSKISENSNQVRNLGKPVELATKY 346 Query: 40 AEEGADELVFYDITASSDGRVVDKSW---VSRVAEVIDIPFCVAGGIKSLED-------- 88 +GADE+ F +IT+ + + D + + AE I +P V GGIK L D Sbjct: 347 YNQGADEITFLNITSFRNSPLKDLPMLQVLRKSAETIFVPLTVGGGIKDLYDSETKKIIP 406 Query: 89 ----AAKILSFGAD-----------------------------------KISINSPALAD 109 A GAD ++ Sbjct: 407 AVDIAHLYFQSGADKISIGSDAVIIAENYYANNQIPLGTSSIETISSKFGNQAVVISVDP 466 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + ID G+ + + ++ + L+ +K Sbjct: 467 KRKYIKNPQLDTTMETIKIIDPLQYGPNGEQYCYYQVTSQGGRKLHELGALELCLACEKL 526 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR-DADVDGA 228 GAGEI+LN ++ DG G++L+ L++++ +P+IAS GAG +HF + F D +D A Sbjct: 527 GAGEILLNSIDNDGSNKGFNLQLLQQIKSHVSIPVIASSGAGNPQHFQQVFEMDCGIDAA 586 Query: 229 LAASVFHKQIINIGELKAYLATQ-GVEIRI 257 L A +FH+ + E+K YL + +++R+ Sbjct: 587 LGAGIFHRGEYTVNEVKKYLQQEAKMDVRL 616 >UniRef50_Q1IVR5 Dihydrouridine synthase TIM-barrel protein nifR3 n=2 Tax=Acidobacteria RepID=Q1IVR5_ACIBL Length = 370 Score = 103 bits (256), Expect = 7e-21, Method: Composition-based stats. Identities = 21/180 (11%), Positives = 59/180 (32%), Gaps = 5/180 (2%) Query: 71 EVIDIPFCVAG-GIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 I + G ++L DAAK++ G D + +N + + + Sbjct: 87 NERPISAQLFGSDAETLADAAKVVQDLGFDLVDLNLGCPSKRVVKCNGGSGLLRDLPQIK 146 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 + +++ + + + L+ + + G + ++ ++ +G Sbjct: 147 V--IFESVRKAVTIPFTVKFRAGWNEKELVFLELAKLAENCGLNAVAMHARTREQGYSGQ 204 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + + +++V +P+I +G T E D + +++ Y Sbjct: 205 ANWGWIADLKQVVKIPVIGNGDIRTPEDAAAMVAKTGCDAVMIGRSAASNPWIFRQIEQY 264 Score = 83.2 bits (204), Expect = 9e-15, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 3/158 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK N + + + LAK G + + + T + W++ + +V+ Sbjct: 159 PFTVKFRAGWNEKELV-FLELAKLAENCGLNAVAMHARTREQGYSGQANWGWIADLKQVV 217 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 IP G I++ EDAA +++ G D + I A ++P + ++ + + Sbjct: 218 KIPVIGNGDIRTPEDAAAMVAKTGCDAVMIGRSAASNPWIFRQIEQYTATGRYDLPTNED 277 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 Y D + W G Sbjct: 278 RYEMIRMYFRMLIENDTQGAEGKMKQFASWFTHGVPGG 315 >UniRef50_C9XSF8 tRNA-dihydrouridine synthase n=24 Tax=Clostridia RepID=C9XSF8_CLODC Length = 322 Score = 102 bits (255), Expect = 8e-21, Method: Composition-based stats. Identities = 21/219 (9%), Positives = 57/219 (26%), Gaps = 3/219 (1%) Query: 38 RYAEEGADELVFYDITASS--DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 E+G L I + K + E + + G A + Sbjct: 28 ICKEQGCGLLYTEMINGKALCYDDENTKKMLKIEEEEHPVAVQIFGSEPEFMGRAAEIMN 87 Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 ++ + + D + + A Sbjct: 88 DYSNEILDINMGCPAPKVVKNGDGSALMKNPKLAEEVLRAVVKNSKKPVTLKIRKGWDDN 147 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTME 214 ++ + + G + ++ ++ G D + + ++++ +P+I +G T+E Sbjct: 148 SVNAVEIAKIAEDCGISALAIHGRTREQFYTGKADWDIIAEIKKNLSIPVIGNGDVFTIE 207 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + D + + Y+ T + Sbjct: 208 DSINMLDKTGCDAIMIGRGAQGNPWIFKRINHYMNTGEI 246 Score = 89.8 bits (221), Expect = 9e-17, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 3/111 (2%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAE 71 + +K + + + + V +AK + G L + T D ++ + + Sbjct: 133 KKPVTLKIRKGWDDNSV-NAVEIAKIAEDCGISALAIHGRTREQFYTGKADWDIIAEIKK 191 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFG 121 + IP G + ++ED+ +L G D I I A +P + R+ Sbjct: 192 NLSIPVIGNGDVFTIEDSINMLDKTGCDAIMIGRGAQGNPWIFKRINHYMN 242 >UniRef50_Q5FMA1 Transcriptional regulator n=14 Tax=Firmicutes RepID=Q5FMA1_LACAC Length = 342 Score = 102 bits (255), Expect = 8e-21, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 64/218 (29%), Gaps = 4/218 (1%) Query: 39 YAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLEDAAKILSF 95 E GA +V I+ S + + + GG ++L AA+ + Sbjct: 34 CKEFGAGLVVCEMISDHGIIYRNKKTLSMMDVDPREHPMSIQIFGGTEETLLQAAQYIDQ 93 Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 D I+ +T+ I A Sbjct: 94 NTDADIIDINMGCPVPKVTKTDAGSKWLLDSNKIYQMVHAVVQNVQKPVSVKMRIGWDRK 153 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTME 214 ++ Q+ GA I ++ + + G D E L V +V VP +A+G T E Sbjct: 154 HVFAVENALAAQEAGASMIAMHGRTRKQMYQGEADWEVLHDVAQVLDVPFVANGDIATPE 213 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +A D + + ++ YL T Sbjct: 214 LAKKALDDIGCTAVMVGRAALGNPWILKDMVHYLETGE 251 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 8/190 (4%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V+ VK + + + V A E GA + + T + D + VA Sbjct: 138 VQKPVSVKMRIGWDRKHVF-AVENALAAQEAGASMIAMHGRTRKQMYQGEADWEVLHDVA 196 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGI 129 +V+D+PF G I + E A K L G + + AL +P ++ + + Sbjct: 197 QVLDVPFVANGDIATPELAKKALDDIGCTAVMVGRAALGNPWILKDMVHYLETGETLPPQ 256 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 ET K+ + R + I + + + + Sbjct: 257 TVREKVETAKHQLQGLIEIHGEKRAVPEFRQQAAYYL-----KGIPRSARTRAKINEVWT 311 Query: 190 LEQLKKVREV 199 +++ + + Sbjct: 312 RQEVYDLLDN 321 >UniRef50_C1A3V7 Putative tRNA-dihydrouridine synthase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3V7_GEMAT Length = 349 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 69/222 (31%), Gaps = 4/222 (1%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-LEDAAKIL 93 + GAD +V F S + E I + G S + DAA ++ Sbjct: 31 RLCHAHGADVVVTEFLSAEGIRRENEATISKLRFAPEERPIGVQIFGSEPSAMADAAALV 90 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + ++ + R G + ++ A + + S Sbjct: 91 TDMFSPDFVDINFGCPVKKVVRRNGGSGCLKDLDLVEEIIRAVSKATPLPVTVKTRSGWN 150 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 + + +Q GA L+ + + +G + +++ +V E +P++ +G T Sbjct: 151 EEMRDPVGIALRMQDAGAKVFALHARTRTQMYSGSANWDEIARVAEALDIPVLGNGDIKT 210 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 DG + + Q + +A + V Sbjct: 211 ALDAKRMLDHTKADGIMIGRGSYGQPWVFKQTRALIDGTPVP 252 Score = 80.1 bits (196), Expect = 6e-14, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 3/103 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK N E + D V +A R + GA + T + + ++RVAE + Sbjct: 140 PVTVKTRSGWNEE-MRDPVGIALRMQDAGAKVFALHARTRTQMYSGSANWDEIARVAEAL 198 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITR 115 DIP G IK+ DA ++L AD I I + P + + Sbjct: 199 DIPVLGNGDIKTALDAKRMLDHTKADGIMIGRGSYGQPWVFKQ 241 >UniRef50_C4Z9L8 tRNA-dihydrouridine synthase n=26 Tax=Firmicutes RepID=C4Z9L8_EUBR3 Length = 323 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 69/220 (31%), Gaps = 7/220 (3%) Query: 38 RYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAE-VIDIPFCVAG-GIKSLEDAAKILS 94 E+GA L ++A + + + + + E + + G + + AK + Sbjct: 36 LCKEQGAGLLCMEMVSAKAILYKNKNTESLLSIDEREKPVSLQMFGSDPQIMAQIAKQIE 95 Query: 95 -FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 D + IN + + ++ Sbjct: 96 ERPFDILDINMGCPVPKIVNNGEGSALMKNPL--LAGQIIESIVKAIDKPVTVKIRKGFD 153 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 ++ ++ GA + ++ ++ +G D + +++V+E +P+I +G + Sbjct: 154 DEHVNAVELAHVAEESGASAVAVHGRTREQYYSGKADWDIIRQVKEAVSIPVIGNGDLLS 213 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 E ++ DG + A ++ Y T Sbjct: 214 AEDVIKMQEQTGCDGFMIARGAQGNPWIFSQILHYFETGE 253 Score = 99.0 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 48/162 (29%), Gaps = 5/162 (3%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKS 64 I+ +D VK + + E + + V LA E GA + + T D Sbjct: 136 IVKAID--KPVTVKIRKGFDDEHV-NAVELAHVAEESGASAVAVHGRTREQYYSGKADWD 192 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 + +V E + IP G + S ED K+ G D I A +P + +++ F Sbjct: 193 IIRQVKEAVSIPVIGNGDLLSAEDVIKMQEQTGCDGFMIARGAQGNPWIFSQILHYFETG 252 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 H + Sbjct: 253 EHQEKPSFEEVRRMILRHARMMIEFKGEYTGIHEMRKHTAWY 294 >UniRef50_D2L5A7 Histidine biosynthesis protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5A7_9DELT Length = 261 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 129/257 (50%), Gaps = 9/257 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML KR+IP + V+ G VV+ + FR + +G + + DE+V I D + Sbjct: 1 MLKKRLIPVVLVKQGLVVQSIGFRRYLPVGRPKITVEFFNRWDCDEIVLLAIDREPD--L 58 Query: 61 VDKSWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + ++ +P V GG++ +ED ++L GADK+S+N+ A DP LITR A+ Sbjct: 59 ARLAGLTAHVSGAAFVPLTVGGGVRRIEDFQELLRAGADKVSLNTAAFRDPELITRAAEA 118 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FG Q +VV ID T + D+ +E ++RGAGEI+LN + Sbjct: 119 FGNQEVVVSIDARR-----HADGRYEVFVGGGREATGADPRDFAREAERRGAGEILLNAI 173 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++DG + GYDLE +++V +P+IA GG G +EH EA A +++FH Sbjct: 174 DRDGGKQGYDLELVRRVATAVSIPVIALGGVGRIEHVPEAIGAGAAAAAA-SNIFHHIEH 232 Query: 240 NIGELKAYLATQGVEIR 256 + K + G+ +R Sbjct: 233 STILAKQAMHKAGIAVR 249 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 29/93 (31%), Gaps = 2/93 (2%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + EIVL ++++ V VPL GG +E F E R A Sbjct: 38 FFNRWDCDEIVLLAIDREPDLARLAG-LTAHVSGAAFVPLTVGGGVRRIEDFQELLR-AG 95 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D + + I Q V + I Sbjct: 96 ADKVSLNTAAFRDPELITRAAEAFGNQEVVVSI 128 >UniRef50_C1ZDL9 Putative TIM-barrel protein, nifR3 family n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZDL9_PLALI Length = 385 Score = 102 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 61/203 (30%), Gaps = 6/203 (2%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-LEDAAKILSF-GADKISINSPA 106 + G ++ + GG S + DAA++L G D I IN Sbjct: 80 LVNARGLLAGSEKTLRLIATHPIDRPFAVQIFGGEASIMRDAAQLLEARGVDSIDINMGC 139 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + T E V +Q + +E Sbjct: 140 PVLKVVKTGAGASLMCHADAATELVKAVVEAVHVPVTV--KMRLGWDASQLTAPRFAREF 197 Query: 167 QKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDAD 224 ++ G + ++ + +G + + +++V E +P+IA+G +++ + + + Sbjct: 198 EQVGVAAVAIHGRTRAQGFSGTVNRDGIRQVVEAVDSIPVIANGDIRSVDDAIAMYDETG 257 Query: 225 VDGALAASVFHKQIINIGELKAY 247 +L + Sbjct: 258 CQAISIGRGALANPWIFRQLTEW 280 Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 48/157 (30%), Gaps = 4/157 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V VK + + A+ + + G + + T + V++ + +V Sbjct: 171 VHVPVTVKMRLGWDASQLTAP-RFAREFEQVGVAAVAIHGRTRAQGFSGTVNRDGIRQVV 229 Query: 71 EVID-IPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 E +D IP G I+S++DA + G ISI ALA+P + +L + Sbjct: 230 EAVDSIPVIANGDIRSVDDAIAMYDETGCQAISIGRGALANPWIFRQLTEWETTGDWAPA 289 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 + Sbjct: 290 GSFNDRLLLMRRQFRYLQEWVGEETAVSAFRKMSHWY 326 >UniRef50_D1SND3 HisA/hisF family protein n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SND3_9EURY Length = 237 Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 90/257 (35%), Gaps = 33/257 (12%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYDITA 54 +IIP +D+ + V G E + + +A Y E GA+ + D+ Sbjct: 1 MQIIPVIDLMNKIAVHGKSGNRDEYKPLKSVICNSPNPIDVAMAYKERGAETIYIADLN- 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 G + + + V I + LE+ KIL+ DK + + L D L+ Sbjct: 60 FIMGNGDNFEVIKEIDFVNKIVDIGVKRREDLENIKKILNKD-DKAIVATETLKDIELLK 118 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + + + E + Sbjct: 119 EKDIVVSLDFKNGELLLDKNFKDYSLDGILSYVREDTP---------------------L 157 Query: 175 VLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + ++ G + G ++E +K V + + P+ GG M+ E + VDG L A+ Sbjct: 158 TILDISSVGTQRGINVELIKYVLDKTNNPVYVGGGIKGMDDL-ELCYNLGVDGVLIATAI 216 Query: 235 HKQIINIGELKAYLATQ 251 HK I+++ E+ + + + Sbjct: 217 HKGILDLEEIISKFSDK 233 >UniRef50_Q062W6 Putative cyclase hisF n=1 Tax=Synechococcus sp. BL107 RepID=Q062W6_9SYNE Length = 255 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 11/261 (4%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITASS 56 M KR+I L + G F + IG++ L Y DELV D++ Sbjct: 1 MAKKRLIFTLLYQKGGFYLSRNF-RLQKIGNLSWLKINYNFYSVACAIDELVILDVSREK 59 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 R V+ V + +P + G I SL+DA ++ GADK+ IN+ +P L+ L Sbjct: 60 PDRQEFCEVVNEVCQNCFMPLALGGHINSLDDAKMLIYNGADKLIINTALHENPNLVREL 119 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 +G QCI+ +D + + + NQ + + ++ + + G GE+ L Sbjct: 120 IAIYGSQCIIGSVDYKIEEGSFIVYTNQ------GKKRLDRPLNEHIERLGEMGVGELYL 173 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 N +++DG GY E LK++ H+P+I +GGAG H E+ VD A++ + Sbjct: 174 NSIDRDGTGQGYVSEVLKQLDSASHLPIIQAGGAGNKHHLQESLECRGVDAVATANLLNF 233 Query: 237 QIINIGELKAYLATQGVEIRI 257 + + + +L +G+ + I Sbjct: 234 VGDGLPKAREFLINKGISMAI 254 >UniRef50_C1FNC8 Dihydrouridine synthase n=35 Tax=cellular organisms RepID=C1FNC8_CLOBJ Length = 323 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 25/221 (11%), Positives = 68/221 (30%), Gaps = 4/221 (1%) Query: 37 KRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVA-EVIDIPFCVAGGIKS-LEDAAKIL 93 + E G + ++A + + + ++ + + + G + +A + Sbjct: 27 EICKELGCGLVYTEMVSAKALYYESNNTKELCVISNKEKPVALQLFGHEPEIMANAVEFF 86 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + D ++ I + D + A Sbjct: 87 NNNDDVCILDVNMGCPAPKIVKNGDGSALMKDPKLASEIIKAMKKVAKKPITVKFRKGFD 146 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 +++ + +++ G I ++ ++ + G D + KV+ +P+I +G + Sbjct: 147 KNNINAVEFAKIMEQSGVDAITIHGRTREQMYEGKADWAIISKVKNSVSIPVIGNGDVFS 206 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 E LE D DG + ++ + + V Sbjct: 207 SEDALEMINKTDCDGIMIGRGAQGNPWIFKQINEKIKGEHV 247 Score = 89.4 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 3/150 (2%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE 71 + VK + + I + V AK + G D + + T D + +S+V Sbjct: 134 KKPITVKFRKGFDKNNI-NAVEFAKIMEQSGVDAITIHGRTREQMYEGKADWAIISKVKN 192 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + IP G + S EDA ++++ D I I A +P + ++ ++ + + Sbjct: 193 SVSIPVIGNGDVFSSEDALEMINKTDCDGIMIGRGAQGNPWIFKQINEKIKGEHVYYPTP 252 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETL 160 ++ E V + Sbjct: 253 QERIDICINHYKKSLEYFEEHKAVREMRKH 282 >UniRef50_B2ULM0 TIM-barrel protein, nifR3 family n=3 Tax=Verrucomicrobia RepID=B2ULM0_AKKM8 Length = 334 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 61/223 (27%), Gaps = 6/223 (2%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG--GIKSLEDAAKIL 93 E G D +V F ++ + I + G G E A IL Sbjct: 35 ICKELGVDVMVTEFVSAEGILQAWERNRRYTKIENAHRPIGIQLFGADGNHMGEAARIIL 94 Query: 94 SF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 D I IN + ++ + + Sbjct: 95 DHEKPDFIDINFGCPVPKVVGKNGGSSLLKDLPLLASVAGGVVKAVGERIPVTAKIRIGW 154 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 +D + ++ G I ++ + +G + + + + VP+I +G Sbjct: 155 DFQSLCAMDACRLLENEGISMITIHGRTRSQQYSGTANWDIIDECARAMSVPVIGNGDIS 214 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 T + + V G + + G+ K YL + Sbjct: 215 TPQAVAYVKENTAVSGVMIGRAAMENPWIFGDAKYYLLHGTMP 257 Score = 70.1 bits (170), Expect = 6e-11, Method: Composition-based stats. Identities = 16/158 (10%), Positives = 39/158 (24%), Gaps = 4/158 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + + + + EG + + T S + + A + +P Sbjct: 149 KIRIGWDFQSLC-AMDACRLLENEGISMITIHGRTRSQQYSGTANWDIIDECARAMSVPV 207 Query: 78 CVAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADR-FGVQCIVVGIDTWYDA 135 G I + + A + A + I A+ +P + A Sbjct: 208 IGNGDISTPQAVAYVKENTAVSGVMIGRAAMENPWIFGDAKYYLLHGTMPPARDPQEKAA 267 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 ++ + + +G Sbjct: 268 LILRHARMALESRHYGDELHTMRHMRSRILAYTKGFPG 305 >UniRef50_B5X496 tRNA-dihydrouridine synthase 3-like n=3 Tax=Eukaryota RepID=B5X496_SALSA Length = 654 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 38/252 (15%), Positives = 80/252 (31%), Gaps = 18/252 (7%) Query: 12 VRDGQVVKGVQFRNHE-IIGDIVPLA-----------KRYAEEGADELV--FYDITASSD 57 + D V+K Q + D + LA + GAD T Sbjct: 289 LTDADVIKLRQCEKKQVDFKDKLYLAPLTTCGNLPFRRICKRFGADITCGEMAMCTNLLQ 348 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 G+ + + + R V G ++ A++L+ D ++ + L+ + Sbjct: 349 GQSSEWALLKRHESEDLFGVQVEGCFPDTMTRCAELLNNKIDVDFVDINSGCPIDLVYKK 408 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 G+ + V + + + E++K G I L Sbjct: 409 GGGCGLMTRTNKFEQIIRGMNSVLDVPLTVKIRTGVQEKANIAHKLIPEMKKWGVSMITL 468 Query: 177 NMMNQDGVRN-GYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + +++ D + + + +PL +G + ++A R+ DV G + A Sbjct: 469 HGRSREQRYTKSADWDYINTCSQLASPIPLFGNGDILSYYDAMKA-RETDVSGIMLARGA 527 Query: 235 HKQIINIGELKA 246 + E+K Sbjct: 528 LIKPWVFTEIKE 539 Score = 69.7 bits (169), Expect = 8e-11, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 46/168 (27%), Gaps = 5/168 (2%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVS 67 LDV VK + L + G + + + + D +++ Sbjct: 431 VLDV--PLTVKIRTGVQEK-ANIAHKLIPEMKKWGVSMITLHGRSREQRYTKSADWDYIN 487 Query: 68 RVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 ++ IP G I S DA K I + AL P + T + +R Sbjct: 488 TCSQLASPIPLFGNGDILSYYDAMKARETDVSGIMLARGALIKPWVFTEIKERRDWDISS 547 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 T + + + + + + G + Sbjct: 548 SERLDVLRDFTHYGLEHWGSDTQGLEKTRNFLLEWLSFMCRYIPVGLL 595 >UniRef50_UPI000194DF67 PREDICTED: dihydrouridine synthase 3-like (S. cerevisiae) n=2 Tax=Taeniopygia guttata RepID=UPI000194DF67 Length = 718 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 63/215 (29%), Gaps = 6/215 (2%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKIL 93 + GAD T G+ + + + R + G ++ A++L Sbjct: 390 RICKRFGADVTCGEMAVCTNLLQGQSSEWALLKRHHTEDIFGVQLEGAFPDTMTKCAELL 449 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + D ++ L+ + + + V + + Sbjct: 450 NRTIDVDFVDINVGCPIDLVYKKGGGCALMTRSNKFEQIVRGMNSVLDVPVTVKIRTGVQ 509 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIASGGAG 211 + +++ GA + L+ +++ D + + +PL +G Sbjct: 510 EKVNVAHKLIPRIREWGASMVTLHGRSREQRYTRSADWHYIAECARLASPMPLFGNGDIL 569 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E A + V G + A + E+K Sbjct: 570 SYEDANRAMQ-MGVSGIMIARGALIKPWLFTEIKE 603 Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 52/170 (30%), Gaps = 5/170 (2%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVS 67 LDV VK + + L R E GA + + + R D +++ Sbjct: 495 VLDV--PVTVKIRTGVQEK-VNVAHKLIPRIREWGASMVTLHGRSREQRYTRSADWHYIA 551 Query: 68 RVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 A +P G I S EDA + + G I I AL P L T + ++ Sbjct: 552 ECARLASPMPLFGNGDILSYEDANRAMQMGVSGIMIARGALIKPWLFTEIKEQRHWDISS 611 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 T + + + + ++ + G + Sbjct: 612 SERFEILKDFTNYGLEHWGSDTQGVEKTRKFLLEWLSFLCRYIPVGLLEH 661 >UniRef50_B6BR00 Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BR00_9RICK Length = 254 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 81/257 (31%), Positives = 135/257 (52%), Gaps = 10/257 (3%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNH-EIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 ML RII + +VKG +F N G + K Y DE++F+DI+ + + Sbjct: 1 MLKARIITTMLWNGSTLVKGNKFENEKRSAGSPLTTVKIYNSRDVDEILFFDISR--NNK 58 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 ++DK ++ + + + +P + GGI+ + + +GADK++INS +P +I + R Sbjct: 59 IIDKDFILSITDCVSVPITIGGGIEKISQMNDLFEYGADKVAINSIIYKNPNIIDEASKR 118 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 FG Q I V ID + + + + + + D + E RGAGEIV+N + Sbjct: 119 FGSQAITVSIDVRKNNQNYE------CYYDLGKIKSDRKLNDLLVECVNRGAGEIVINCI 172 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 N DG+ GYD E +++ + ++P++ASGGAG+ EHF EA+++ D AAS++H Sbjct: 173 NNDGLMKGYDNELIQQTSSLANIPIVASGGAGSYEHFYEAYKN-GADAFAAASIYHFTEH 231 Query: 240 NIGELKAYLATQGVEIR 256 + K YL + V IR Sbjct: 232 TPAKAKKYLLKKKVPIR 248 Score = 50.1 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 3/92 (3%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 R EI+ ++++ D + + + + VP+ GG + + F Sbjct: 40 YNSRDVDEILFFDISRNNKI--IDKDFILSITDCVSVPITIGGGIEKISQMNDLFEY-GA 96 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D S+ +K I E +Q + + I Sbjct: 97 DKVAINSIIYKNPNIIDEASKRFGSQAITVSI 128 >UniRef50_UPI0000D52F94 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52F94 Length = 338 Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 61/217 (28%), Gaps = 8/217 (3%) Query: 38 RYAEEGADELVFYDITAS----SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 E GAD + TA+ + E IP G I + +L Sbjct: 30 LAKECGADF-TVTEFTAASGLTRKNTNSWLKVETDPREKPFIPQIFGGDISEMAKTVGML 88 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 +D I IN A V E+ + T Sbjct: 89 EDRSDVIDINFGCPAPKVCRNDAGAALLRDPDKVVSMVRRCIESTNVPITV--KMRLGTG 146 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGT 212 L+ + + G I ++ +G D +Q+K++ +P+IA+G Sbjct: 147 SGPNTALEISKRLADEGVMRICVHGRTLRQRYSGIADWDQIKEISNSVDIPVIANGDVVD 206 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + + G + + E+K + Sbjct: 207 TKSAELCLEATNAGGLMIGRGAIGRPTIFHEIKHGMG 243 Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 63/202 (31%), Gaps = 9/202 (4%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVI 73 VK + ++KR A+EG + + T + D + ++ + Sbjct: 136 PITVKMRLGTGSGPNT-ALEISKRLADEGVMRICVHGRTLRQRYSGIADWDQIKEISNSV 194 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGI--- 129 DIP G + + A L A + I A+ PT+ + G Sbjct: 195 DIPVIANGDVVDTKSAELCLEATNAGGLMIGRGAIGRPTIFHEIKHGMGWSHKTAPWGKG 254 Query: 130 ---DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 ++Q +S ++ + + + + ++ A + L+ + Sbjct: 255 GPSRARSWCWDRYLELSQEVYGDSGSKNLKRHAISFTKGLEGASAMRVRLHSIQDKTQLG 314 Query: 187 GYDLEQLKKVREVCHVPLIASG 208 L + E + IAS Sbjct: 315 TEVSNYLHDLEETENQVEIASS 336 >UniRef50_B6W908 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W908_9FIRM Length = 321 Score = 100 bits (249), Expect = 4e-20, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 67/221 (30%), Gaps = 9/221 (4%) Query: 40 AEEGAD--ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA 97 GAD + A + + + G E K++ Sbjct: 28 ERYGADKTFTEMVSVNALYYDNKKTNDLLFISENEKNCNIQLFG--SKPEVIEKVIKDKI 85 Query: 98 DKISINSPALADPTLI----TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + I + + T+ + + ++ Sbjct: 86 NYIEKSKEISFNMGCPVAKITKNGEGSQLMANPKLVEEICKTLRKSTDKKLNIKFRLGID 145 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 LD + Q G ++L+ +D + +G + + ++K++E +P+IA+G + Sbjct: 146 DKHINYLDIGKIAQDTGIDYVILHARTKDQMYSGNANWDHIRKLKENLQIPVIANGDIFS 205 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 +E F+ DG + A E+K Y+ T Sbjct: 206 VEDFINVIDLTKADGVMLARGAMGNPFLFKEIKDYIKTGKY 246 Score = 74.0 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 3/104 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIP 76 +K + + I + + + K + G D ++ + T + + ++ E + IP Sbjct: 138 IKFRLGIDDKHI-NYLDIGKIAQDTGIDYVILHARTKDQMYSGNANWDHIRKLKENLQIP 196 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADR 119 G I S+ED ++ AD + + A+ +P L + D Sbjct: 197 VIANGDIFSVEDFINVIDLTKADGVMLARGAMGNPFLFKEIKDY 240 >UniRef50_Q6KZD4 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Picrophilus torridus RepID=Q6KZD4_PICTO Length = 222 Score = 100 bits (249), Expect = 4e-20, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 77/242 (31%), Gaps = 31/242 (12%) Query: 6 IIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 + P +D+ +G+ V R + GD V A R+ E D L D+ + + + ++ Sbjct: 4 VYPAIDIYNGRAVFLENGRLERIKVYGDPVYYALRFQEY-FDFLHVIDLNGAIENKRKNR 62 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + + + V GG+++L D + FGA + Sbjct: 63 DVIKNIIKEVKAKVQVGGGLRTLNDVIDVYDFGA----------------------YSAI 100 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 T V + ++ K + + DG Sbjct: 101 IGTNIDIEVDKNVTLSIDVYKDRVANRGWLNITDNDPVSFYKMLKNRFSRFIYTNIGSDG 160 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 N E+ + I +GG + +A ++ G + ++ I+ GE Sbjct: 161 TNNSGIPEKFWD-----NEYFIYAGGVSGINDVKKALKN-GFSGIIIGRALYENRIDPGE 214 Query: 244 LK 245 LK Sbjct: 215 LK 216 >UniRef50_Q5CSA9 Dus1p, tRNA dihydrouridine synthase (Fragment) n=3 Tax=Cryptosporidium RepID=Q5CSA9_CRYPV Length = 409 Score = 100 bits (249), Expect = 5e-20, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 66/231 (28%), Gaps = 15/231 (6%) Query: 34 PLA--KRYAEEGADE----LVFYDI-TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 LA + G D + + + R + + I ++L Sbjct: 31 ELAFRLICKKYGCDLGYSPMYHSGLFSKLQGYRETNFQTCEE--DDPMIVQFCGNDPETL 88 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 A+K + I IN + ++ +E+ Sbjct: 89 VKASKFIDDKVKGIDINFGCPQNIAKRGNYGAFLLSNPDLMERIISTLSESD-LKCPVSC 147 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN---QDGVRNGYDLEQLKKVREVCHVP 203 T++ ++ ++ GA I ++ + + + E LK ++ C +P Sbjct: 148 KIRILDHHDLQPTINLIKRLESAGACMIAVHGRTMTSRGVLTGPANWEALKILKSRCSIP 207 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK--AYLATQG 252 IA+GG E + D ++A + K + + Sbjct: 208 FIANGGISNYEDIQKCLNYTGADAVMSAEGILENPWLFQGFKTPEAINNKP 258 Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 56/178 (31%), Gaps = 8/178 (4%) Query: 5 RIIPCL---DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG--- 58 RII L D++ K +H + + L KR GA + + T +S G Sbjct: 131 RIISTLSESDLKCPVSCKIRI-LDHHDLQPTINLIKRLESAGACMIAVHGRTMTSRGVLT 189 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLA 117 + + + IPF GGI + ED K L++ GAD + L +P L Sbjct: 190 GPANWEALKILKSRCSIPFIANGGISNYEDIQKCLNYTGADAVMSAEGILENPWLFQGFK 249 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + + RT + + + EI Sbjct: 250 TPEAINNKPSQFQIALEYLDYCILYPPPNVGIIRTHLYRIFHTIFSLPGAHIFRDEIN 307 >UniRef50_Q3A324 Dihydrouridine synthase n=10 Tax=Desulfuromonadales RepID=Q3A324_PELCD Length = 342 Score = 100 bits (248), Expect = 6e-20, Method: Composition-based stats. Identities = 22/196 (11%), Positives = 55/196 (28%), Gaps = 4/196 (2%) Query: 58 GRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 G + ++ + + G K L A K + D I +N + + Sbjct: 69 GGDATRDLLASTPSDRPLGIQLFGENPKYLSQACKQVESHGDLIDLNIGCPVKKVVRSGA 128 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 V + + + L+ ++ G I L Sbjct: 129 GSALMQTPARVAQIIAAMRRATHLPLTV--KIRAGWDASHINFLEIAHIAEQEGVDAITL 186 Query: 177 NMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + + +G + + + +++ +P+I SG ++ + D + + Sbjct: 187 HPRTRSQGFSGSANWDLIAELKRRSTIPVIGSGDIFEAQYAQRMLQQTGCDAVMIGRGCY 246 Query: 236 KQIINIGELKAYLATQ 251 ++ A Q Sbjct: 247 GNPWLARDILAMRQGQ 262 Score = 83.6 bits (205), Expect = 5e-15, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 3/162 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + I + + +A +EG D + + T S + ++ + Sbjct: 153 PLTVKIRAGWDASHI-NFLEIAHIAEQEGVDAITLHPRTRSQGFSGSANWDLIAELKRRS 211 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 IP +G I + A ++L G D + I +P L + Q Sbjct: 212 TIPVIGSGDIFEAQYAQRMLQQTGCDAVMIGRGCYGNPWLARDILAMRQGQTPAPVTPEE 271 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 ++ ++ R V GA + Sbjct: 272 RCDVALRHMELFLRFNDERKAVFDLRKHLCWYAKGLPGAAQF 313 >UniRef50_D0L1E3 TIM-barrel protein, nifR3 family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1E3_HALNC Length = 333 Score = 100 bits (248), Expect = 6e-20, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 71/252 (28%), Gaps = 19/252 (7%) Query: 19 KGVQFRNHEIIGDIVPLA-----------KRYAEEGADELVFYDITASSDGRVVDKSWVS 67 G II + LA + E GA +V ++A + + KS + Sbjct: 13 HGRTGDP-VIIDPPLALAPMAGVSDRPFRQLCREYGAGLVVTEMMSAKPELQSSAKSRLR 71 Query: 68 RVAEVIDIP----FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 ++ P + E A +S GA I +N A + Sbjct: 72 QIDSNDIEPRAVQLLGNDPFELAEAARFAVSQGAQLIDLNLGCPAKKVCKRAAGSALMAE 131 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 V +A + + + + G + ++ + Sbjct: 132 PDTVAR--LLEALVAAVDCPVSLKMRTGPDREWRNAVAIAKIAENAGISMLSIHGRTRAD 189 Query: 184 VRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G + + + +V +P+ A+G T + + G + Q Sbjct: 190 RYEGEAEYDTIAEVVAAVDLPVFANGDITTPQKARQVIAHTGAAGIMVGRGAFGQPWIFS 249 Query: 243 ELKAYLATQGVE 254 LKA L Q + Sbjct: 250 ALKAELTGQPLP 261 >UniRef50_C9YDK8 Imidazole glycerol phosphate synthase subunit hisF n=2 Tax=Bacteria RepID=C9YDK8_9BURK Length = 286 Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 5/216 (2%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 ML R+IP L + +VKGV F + +G ++P K Y + DELV DI A G Sbjct: 27 MLKVRVIPTLLWKHFGLVKGVGFNSWRRVGPVLPAIKVYNQREVDELVLVDILAHGRGEE 86 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D + + +P V GGI +E ++L GADK+S+N+ A A P L++ +A R Sbjct: 87 PDYESIHEFGQDCFVPLTVGGGITHIEQVQRLLRVGADKVSLNTAAYARPELVSDIARRH 146 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 GVQC+V ID + T+ T + + W +E++ RGAGEI++ ++ Sbjct: 147 GVQCVVASIDVRPR-----AGGGWDCFSHAGTQPTGRDVVAWARELEDRGAGEILVTSID 201 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 DG GYDL + V + +P+IASGGAG +H Sbjct: 202 LDGSMRGYDLALVAAVAQAVKIPVIASGGAGNYQHM 237 >UniRef50_D0U4P6 tRNA-dihydrouridine synthase n=2 Tax=uncultured SUP05 cluster bacterium RepID=D0U4P6_9GAMM Length = 324 Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 53/165 (32%), Gaps = 3/165 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 A + L FGAD I IN A + + +A + Sbjct: 82 AYSAQQALKFGADIIDINMGCPAKKVCNKAAGSALMQD--EALVKSILNAVVSAVDIPVT 139 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + V+ + ++ G + ++ ++ G + + +K V+ +P+ Sbjct: 140 LKMRTGWNVSNKNAPTIAKIAEEAGIQMLSVHGRTREDKYTGMAEYDTIKAVKSQVGIPV 199 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 IA+G + + + DG + I E+ YL Sbjct: 200 IANGDITSAKKAQSVLQYTGADGVMVGRATQGNPWIIHEIDHYLK 244 Score = 88.2 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 58/175 (33%), Gaps = 8/175 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKS 64 ++ +D+ +K N +AK E G L + T + + Sbjct: 130 VVSAVDI--PVTLKMRTGWNVSNKNAP-TIAKIAEEAGIQMLSVHGRTREDKYTGMAEYD 186 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRF--- 120 + V + IP G I S + A +L + GAD + + +P +I + Sbjct: 187 TIKAVKSQVGIPVIANGDITSAKKAQSVLQYTGADGVMVGRATQGNPWIIHEIDHYLKTG 246 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + ++ + G++ T++++ + + ++ A Sbjct: 247 QKATDIPLNVKKQTILDHIKQIHAFYGEKLGTQLSRKHIFWYATHLDEKNAQTFW 301 >UniRef50_Q9KV66 tRNA-dihydrouridine synthase B n=56 Tax=Proteobacteria RepID=DUSB_VIBCH Length = 322 Score = 99.8 bits (247), Expect = 8e-20, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 48/166 (28%), Gaps = 3/166 (1%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 E A + GA I IN A I+ A +V Sbjct: 79 MAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPD--VIEDILKAVVNAVNVPV 136 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVP 203 + L Q + G + L+ + + G + + +K V+ +P Sbjct: 137 TLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEAEYDSIKAVKAAVSIP 196 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +IA+G + E D + + E++ +L Sbjct: 197 VIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFLE 242 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 3/153 (1%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + + + +A+ + G L + T + + + V + IP Sbjct: 139 KTRTGWD-TDNKNCLSIAQLAEDCGIQALALHGRTRACMYKGEAEYDSIKAVKAAVSIPV 197 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I S E A +L + GAD + I PA P + + + + + Sbjct: 198 IANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIFQEIQHFLEHGTTMPELPISEVKD 257 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 HV + +Q+ Sbjct: 258 IMLGHVTALHQFYGEYLGPRIARKHVSWYLQEH 290 >UniRef50_Q5KNA0 Imidazoleglycerol phosphate synthase, putative n=3 Tax=Basidiomycota RepID=Q5KNA0_CRYNE Length = 619 Score = 99.8 bits (247), Expect = 8e-20, Method: Composition-based stats. Identities = 86/331 (25%), Positives = 131/331 (39%), Gaps = 76/331 (22%) Query: 2 LAKRIIPCLDVRD---GQVVKGVQFRNH----------EIIGDIVPLAKRYAEEGADELV 48 L RI+ CLDVR G +V + +G V LA+RY GADE+ Sbjct: 282 LTNRIVACLDVRSNDAGDLVVTKGDQYDVREKSSDKAVRNLGKPVELAQRYYLSGADEVA 341 Query: 49 FYDITASSDGRVVD---KSWVSRVAEVIDIPFCVAGGIKS-----------LEDAAKILS 94 F +IT+ ++D V AE + +P + GGIK LE A Sbjct: 342 FLNITSFRSSALLDQPMLDVVRAAAETVFVPLTIGGGIKDTTDPDGTFHPALEVAGAYFR 401 Query: 95 FGADKISINSPALA---------------------------------------------- 108 GADK+SI S A+ Sbjct: 402 SGADKVSIGSEAVIAVEEMLEREARGEPALTGKTGIETISKGYGRQAVVVSIDPKRVYVD 461 Query: 109 --DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY-TGDESRTRVTQWETLDWVQE 165 P + + I+ T A K Y V + + Q Sbjct: 462 TSAPGWLESFPAKHRASLIIGDNATSRTAPQEKGKAWWYQCTISGGRAVRDIDVVQLAQG 521 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 V++ GAGEI+LN +++DG G+DL+ +K V+ +P+++S GAG+ F E FR+ Sbjct: 522 VERLGAGEILLNSVDRDGSGQGFDLDLVKLVKNAVGIPVVSSSGAGSPADFEEVFRETGT 581 Query: 226 DGALAASVFHKQIINIGELKAYLATQGVEIR 256 + ALAA +FH+ + I E+K +L + + +R Sbjct: 582 EAALAAGIFHRGEVGIDEVKGWLEGKEMAVR 612 >UniRef50_Q6SFW7 NifR3/Smm1 family protein n=1 Tax=uncultured marine bacterium 578 RepID=Q6SFW7_9BACT Length = 322 Score = 99.8 bits (247), Expect = 8e-20, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 5/188 (2%) Query: 70 AEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 +E I +AG E A + L FGAD I IN A Sbjct: 62 SEQSPISIQIAGSESQELAESAKQALEFGADIIDINMGCPAKKVCNKAAGSALM--KNEK 119 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 ++ A ++ + + + G + ++ + NG Sbjct: 120 LVEDIIKAVVNAVNIPVTLKMRTGWNEENKNAPTIAKIAEDNGIKMLAIHGRTRAQKYNG 179 Query: 188 -YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + +KK++ + +P++A+G + + + D + +G++ Sbjct: 180 DAEYDTVKKIKGIVSIPVVANGDITSAQKAKKVLDYTGADAVMLGRATQGNPWLVGQINN 239 Query: 247 YLATQGVE 254 YL T Sbjct: 240 YLKTGKSP 247 Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 55/164 (33%), Gaps = 6/164 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K N E +AK + G L + T + + V ++ ++ IP Sbjct: 139 KMRTGWNEENKNAP-TIAKIAEDNGIKMLAIHGRTRAQKYNGDAEYDTVKKIKGIVSIPV 197 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGI---DTWY 133 G I S + A K+L + GAD + + +P L+ ++ + Sbjct: 198 VANGDITSAQKAKKVLDYTGADAVMLGRATQGNPWLVGQINNYLKTGKSPKAPLLDKKIS 257 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 ++ + G + T++++ + + + N Sbjct: 258 LILRHILQIHDFYGHKMGTQLSRKHIFWYSMHLDQEKGSAFWPN 301 >UniRef50_Q2LR94 TRNA-dihydrouridine synthase n=2 Tax=Deltaproteobacteria RepID=Q2LR94_SYNAS Length = 326 Score = 99.4 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 21/218 (9%), Positives = 59/218 (27%), Gaps = 13/218 (5%) Query: 38 RYAEEGAD-----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAK 91 E G + + + ++ + + + G ++ DA + Sbjct: 29 MAREAGCALAFTEMISANGLVRGIEKSQ---QYMKSCIDDKPLGVQIFGNDPTTMADAVR 85 Query: 92 ILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 I+ +GAD I +N + + ++ S Sbjct: 86 IVDDYGADLIDLNMGCPVKKVVKNGAGAALLKDPG--LVSQILESVRKATRKPLTVKIRS 143 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGG 209 + + + +++G + ++ G D +++++ + +I +G Sbjct: 144 GWNLQSINAVQIARIAEQQGIDAVFVHARTAVQGFAGSADWRIIEEIKNSVGIKVIGNGD 203 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + + DG + E Y Sbjct: 204 VKSGADAWRMIKMTGCDGVMIGRGALGNPWIFNEALNY 241 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 3/155 (1%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE 71 R VK N + I + V +A+ ++G D + + TA D + + Sbjct: 134 RKPLTVKIRSGWNLQSI-NAVQIARIAEQQGIDAVFVHARTAVQGFAGSADWRIIEEIKN 192 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + I G +KS DA +++ G D + I AL +P + + Sbjct: 193 SVGIKVIGNGDVKSGADAWRMIKMTGCDGVMIGRGALGNPWIFNEALNYQSTVQTHSEPV 252 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 E H+ + T + + + Sbjct: 253 LNERKEMILRHLERETIFLGQKEAVKRFRKHLLWY 287 >UniRef50_Q7X346 Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X346_9BACT Length = 355 Score = 99.4 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 62/216 (28%), Gaps = 8/216 (3%) Query: 37 KRYAEEGADELVFYDIT---ASSDGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAK 91 + E GA + ++T R + + + R +AG ++ AA Sbjct: 14 RLCVELGAR-ITVSEMTLARRLKQKRNSEFALIRRFPGEPCFGVQLAGNKPDETAWAAAL 72 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + S GAD + IN D L G Q + + ++ Sbjct: 73 VESRGADFVDINFGCPIDYFTRKGLGASIGRQPQRMRRL-VEAIKGSVTNIPVTAKIRLG 131 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGA 210 L Q GA + ++ ++ D + + ++ VP+I +G Sbjct: 132 WNDDDRNYLQQAQAAVDGGAAALFVHGRTRNARYRFAADWDAIARIVAAVPVPVIGNGDL 191 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 A + + A + E Sbjct: 192 LFPHEIAAARERSGCAAVMVARAALIKPWIFREAVD 227 Score = 74.0 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 40/149 (26%), Gaps = 3/149 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPF 77 K N + + + A+ + GA L + T + D ++R+ + +P Sbjct: 127 KIRLGWNDDD-RNYLQQAQAAVDGGAAALFVHGRTRNARYRFAADWDAIARIVAAVPVPV 185 Query: 78 CVAGGIKSL-EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + E AA G + + AL P + D + + + Sbjct: 186 IGNGDLLFPHEIAAARERSGCAAVMVARAALIKPWIFREAVDGYWDITAEERVGLYRRYV 245 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQE 165 T T Sbjct: 246 TLAREHWGDDEHGLARIRTFLNWHLEFWY 274 >UniRef50_Q01ZU7 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZU7_SOLUE Length = 227 Score = 99.4 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 95/241 (39%), Gaps = 19/241 (7%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGD-IVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 I+PC+D+ DG+VV+ +Q R + GD + +R+ G E+ D+ A+ G+ + + Sbjct: 2 IVPCIDLMDGKVVQLIQGREKALEGDSPDEMLRRF--AGFPEIQVIDLDAAL-GKGSNDT 58 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 V +A V GG+++L+ A +LS GA ++ + + A + + Sbjct: 59 LVKMLASKAVCR--VGGGVRTLDRANTLLSQGAHRVIVGTSAFTKGGINVPFLETLD--- 113 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + T + V + + ++++G+ Sbjct: 114 --------PATTIVALDSKGGRIVVKGWQEATEFTAEEVLHSLEPYCSGFLCTYVDKEGM 165 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 G DL+ ++R + A+GG T+E ++ A + +++ EL Sbjct: 166 MQGTDLDWFARLRAATAHEITAAGGITTLEDIKALL-AMNIHTA-VGMAIYTGRLDLEEL 223 Query: 245 K 245 + Sbjct: 224 R 224 >UniRef50_Q5KC68 tRNA-dihydrouridine synthase 3 n=2 Tax=Filobasidiella neoformans RepID=DUS3_CRYNE Length = 725 Score = 99.4 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 67/231 (29%), Gaps = 22/231 (9%) Query: 37 KRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKI 92 + + GA + ++ + G + + V R VAGG + AA++ Sbjct: 375 RLCVDYGAT-ITVSEMALAQPLVYGAKEEWALVRRHESEKMFGVQVAGGFPNRMVPAAEV 433 Query: 93 LSF------GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 ++ G D + +N D +G Sbjct: 434 IANTIGKGGGVDFVDVNMGCPIDLVFNQGAGSALMDSPGRLGKLLVGMNRALGDIPLTVK 493 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKV--------- 196 + V + GAG + ++ ++ + D E +K Sbjct: 494 FRTGVAHGKPNAHKLIPRFVTEWGAGALTIHGRSRQQRYSKPADWEYIKTCVTALRESVA 553 Query: 197 -REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + VP+ +G + + E + VDG + A + E+K Sbjct: 554 DANLPPVPIFGNGDCFSAASYYEEMDRSGVDGVMVARGALIKPWIFTEIKE 604 >UniRef50_C8W6Y9 TIM-barrel protein, nifR3 family n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W6Y9_ATOPD Length = 363 Score = 99.0 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 63/223 (28%), Gaps = 12/223 (5%) Query: 38 RYAEEGA-----DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI---KSLEDA 89 GA + + I G V ++ DI + G A Sbjct: 55 MARAGGAGLAYSEMVSVAGI---HFGGEKTWELVEPLSTEPDIAVQLFGSKPEQFKEAAA 111 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 G I+ + + + + A + V Sbjct: 112 QISERLGNKLALIDINMACPVPKVVKKGEGSALLDTPELAANLVKACLSEVTVPVTVKIR 171 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASG 208 R + ++ + ++ GA I ++ + G + E + +V + +P+I SG Sbjct: 172 RGRRQDEEVAPEFARAMEAAGASAIAVHGRFATQMYRGQAEWETVNRVCDAVSIPVIGSG 231 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + E A ++ V + A + +A L + Sbjct: 232 DMLSAEDVAHALKETGVTAVMIARGTYGNPWIFKNTQALLEGK 274 Score = 79.8 bits (195), Expect = 8e-14, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 46/172 (26%), Gaps = 3/172 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + R + A+ GA + + A+ R + V+RV + + Sbjct: 165 PVTVKIRRGRR-QDEEVAPEFARAMEAAGASAIAVHGRFATQMYRGQAEWETVNRVCDAV 223 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 IP +G + S ED A L G + I +P + + V Sbjct: 224 SIPVIGSGDMLSAEDVAHALKETGVTAVMIARGTYGNPWIFKNTQALLEGKTPFVPSVDQ 283 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 A + R T + + + Sbjct: 284 MLASFMMHVKLLDAAHIHIARARSLSTWYFRGIPNAAYWRGKSVRCVTAQDF 335 >UniRef50_Q8ZY14 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=5 Tax=Thermoproteaceae RepID=HIS4_PYRAE Length = 229 Score = 99.0 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 84/234 (35%), Gaps = 17/234 (7%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII--GDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 IIP +D+ G+ VK ++ + I GD + LA R+ + A + D+ + G +V+ Sbjct: 2 IIPSIDIEGGRAVKRIRGQRGNYIFQGDPLELAARFRK--APLVHVVDLDGAEAGGLVNI 59 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 S +S++AE+++ + GG++SLE + LS + S + L R A+ + + Sbjct: 60 SVISKIAEILEGRCELGGGLRSLEAVERALSL-CQYAVVGSLPFKNWPLFRRAAELYRDR 118 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 V + + + +++ + +G Sbjct: 119 LAVSLDYRGGE-----------VLVGGWREKAASIAEAVRRLEEAGPYAAVIVTSVEVEG 167 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 G + K + + +GG A DG + + Sbjct: 168 TGGGVKADIDVKSLKRIARRVFYAGGVRDCNDVERA-YALGFDGVIVGYALYAG 220 >UniRef50_A6DPY9 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPY9_9BACT Length = 330 Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 67/222 (30%), Gaps = 9/222 (4%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIP----FCVAGGIKSLEDAAKI 92 + G D L + S + +S ++ + DIP E A + Sbjct: 25 QIAQHGGLDLLC-TEFIRISSHKPSMRSLKKQIVKSGDIPLSVQIMGNNAELMAESAKLV 83 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + GAD + +N + + + + + Sbjct: 84 VDCGADAVDVNMGCPTKRAVKGGVGSAMLKDPK--LCYQVLASMREQVPCALSAKIRAG- 140 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAG 211 + + +Q + GA + ++ + G+ D + ++E +P+I +G Sbjct: 141 FDNKEGVFEILQAIVDSGADYLAVHPRRRVDHYEGHSDWRIISALKEKSPIPVIGNGDVR 200 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 T + F++ DG + + L+ Q V Sbjct: 201 TAADAVRMFKETQCDGVMIGRGALSNPWIFLQTSQVLSDQEV 242 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 7/197 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K +++ + + + + GAD L + D +S + E IP Sbjct: 136 KIRAGFDNK--EGVFEILQAIVDSGADYLAVHPRRRVDHYEGHSDWRIISALKEKSPIPV 193 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G +++ DA ++ D + I AL++P + + + Q + + Sbjct: 194 IGNGDVRTAADAVRMFKETQCDGVMIGRGALSNPWIFLQTSQVLSDQEVFIPNWEDIYHF 253 Query: 137 TGKYHVNQ--YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQL 193 + +E T E L + A +Q L Sbjct: 254 YHGIAQAFSDFCDNEQGTLNKTKEMLMYFSVNLPEPAPFRKAIGRSQSIDEMMNKLHSFL 313 Query: 194 KKVREVCHVPLIASGGA 210 K+ RE+C + A G Sbjct: 314 KEKRELCGKEICAIGKI 330 >UniRef50_Q31II6 Dihydrouridine synthase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31II6_THICR Length = 320 Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 3/165 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 ++ A S GAD I +N A Q V E V Sbjct: 80 VDAALWQQSQGADIIDLNMGCPAKKVCDVAAGSALMGQPERVADIFKSLTEAIDLPVTV- 138 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + T V ++ + Q+ G I ++ + NG + + +K V++ +P+ Sbjct: 139 -KIRTGTDVDNINAVEIAKLAQELGLKAITIHGRTRADKFNGQAEYDTIKAVKQAVDIPV 197 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 IA+G + + + DG + E+ +L Sbjct: 198 IANGDICSPKEAQFVLKYTGSDGIMIGRAAQGYPWIFREIAHFLK 242 Score = 90.5 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 5/162 (3%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVS 67 +D+ VK + + V +AK E G + + T + + + Sbjct: 131 AIDL--PVTVKIRTGTD-VDNINAVEIAKLAQELGLKAITIHGRTRADKFNGQAEYDTIK 187 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIV 126 V + +DIP G I S ++A +L + G+D I I A P + +A + Sbjct: 188 AVKQAVDIPVIANGDICSPKEAQFVLKYTGSDGIMIGRAAQGYPWIFREIAHFLKTGDCL 247 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + H ++ + Q Sbjct: 248 PSPSFAEFQQVMTRHFSELEILYGEHLGHKIARKHLGWYSQY 289 >UniRef50_A8V5Z6 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V5Z6_9AQUI Length = 119 Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 3/117 (2%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 L + IIP +D+++G+ V+ + + V +AKR+ E+GA L D+ + +G Sbjct: 3 LKEFIIPAVDIKEGRAVRLYKGDPNAVKVYGDNPVEIAKRWEEKGAKHLHIVDLDGAFEG 62 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + V ++ + +++P GG+++ E K++ G +++ I S A D L + Sbjct: 63 IPKNYKIVEQIVKSVNVPIEFGGGLRTYEAVKKMIEIGVERVVIGSLAYQDKELFEK 119 Score = 50.1 bits (118), Expect = 7e-05, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 +++GA + + ++ + + ++++ + +VP+ GG T E + V Sbjct: 43 WEEKGAKHLHIVDLDGAFEGIPKNYKIVEQIVKSVNVPIEFGGGLRTYEAVKKMIEI-GV 101 Query: 226 DGALAASVFHKQIINIGE 243 + + S+ ++ + Sbjct: 102 ERVVIGSLAYQDKELFEK 119 >UniRef50_B3RKU4 Putative uncharacterized protein n=2 Tax=Metazoa RepID=B3RKU4_TRIAD Length = 581 Score = 98.3 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 9/217 (4%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLEDAAKIL 93 + GAD T G+ + + V R V G +L ++ + Sbjct: 252 RICKTFGADVTCSEMALCTNLLQGQQSEWALVKRHESEDLFGLQVCGAWPDTLARLSEYI 311 Query: 94 SF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + D + +N D + + + V + Sbjct: 312 NDRVNVDFVDLNLGCPIDLVFHQGAGSALMGRAN--KLQQIVTGMSSILSVPLTVKLRTG 369 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGG 209 + + ++++ GA + L+ +++ D + + +PLI +G Sbjct: 370 ILAKKSTAHKLIPQIREWGASLVTLHGRSREQRYTKLADWSYINECATAADPMPLIGNGD 429 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E +LE + +V G + A + E+K Sbjct: 430 ILSFEDYLEHMNNTNVAGVMIARGALIKPWLFTEIKE 466 Score = 63.2 bits (152), Expect = 9e-09, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 4/136 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 + VK + L + E GA + + + ++ D S+++ A Sbjct: 358 LSVPLTVKLRTGILAKKST-AHKLIPQIREWGASLVTLHGRSREQRYTKLADWSYINECA 416 Query: 71 -EVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVG 128 +P G I S ED + ++ + I AL P L T + +R Sbjct: 417 TAADPMPLIGNGDILSFEDYLEHMNNTNVAGVMIARGALIKPWLFTEIKERRHWDISANE 476 Query: 129 IDTWYDAETGKYHVNQ 144 + + Sbjct: 477 RFEFLRKYVNYGLEHW 492 >UniRef50_A0Q6L0 TRNA-dihydrouridine synthase n=19 Tax=Francisella RepID=A0Q6L0_FRATN Length = 328 Score = 98.3 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 64/223 (28%), Gaps = 9/223 (4%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVA---EVIDIPFCVAG-GIKSLEDAAKIL 93 E GA + ++ + + + + + G I S A K + Sbjct: 30 ICKEHGAGLIYTEMVSN-KAVVERNWETMEMLYMENSEKPLGIQIFGTDIDSFVGATKYI 88 Query: 94 SFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + D + IN P + +L + V I A H Sbjct: 89 AENTECDFLDINMGCPM-PKVAKKLQAGAALLKDVNRIHEILTAVVKAVHKPVTVKMRIG 147 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 ++ + + G I ++ ++ + G + + ++ VR+ + +I +G Sbjct: 148 WDDKNINAIEVAKACEDAGVSAIAIHGRTREQMYTGKANWDIIRDVRKAVDIVVIGNGDV 207 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 VD + ++ YL T + Sbjct: 208 FCPHSAKAMIEHTGVDAVMVGRASRGNPWIFRQIAKYLNTGEL 250 Score = 93.2 bits (230), Expect = 7e-18, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 3/112 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V VK + + I + + +AK + G + + T + + V Sbjct: 136 VHKPVTVKMRIGWDDKNI-NAIEVAKACEDAGVSAIAIHGRTREQMYTGKANWDIIRDVR 194 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFG 121 + +DI G + A ++ G D + + + +P + ++A Sbjct: 195 KAVDIVVIGNGDVFCPHSAKAMIEHTGVDAVMVGRASRGNPWIFRQIAKYLN 246 >UniRef50_Q7PVV7 AGAP009171-PA (Fragment) n=3 Tax=Endopterygota RepID=Q7PVV7_ANOGA Length = 599 Score = 97.9 bits (242), Expect = 3e-19, Method: Composition-based stats. Identities = 32/257 (12%), Positives = 70/257 (27%), Gaps = 23/257 (8%) Query: 12 VRDGQVVKGVQ-------FRNHEIIGDIVPLA------KRYAEEGADELV--FYDITASS 56 V D V+K FR+ + + + E G D Sbjct: 230 VTDEDVIKLRSAERKRIVFRDKLYLS-PLTTVGNLPFRRICKEYGVDITCGEMACAIPII 288 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGG---IKSLEDAAKILSFGADKISINSPALAD-PTL 112 +G + + + R + + G + + D I +N+ D Sbjct: 289 NGAIQEWALTKRHSSEDLFGVQLCGHNPKLVTYAAQIIAEKADVDFIDLNTGCPIDLIFN 348 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + Q ++ + Y + + V + + GA Sbjct: 349 QGGGSALLRRQNVLKVMVQSCSRLLADYGKEFTVKTRIGIYNNKLIAHEMVPKFEDWGAS 408 Query: 173 EIVLNMMNQDGVRN-GYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDA-DVDGAL 229 I ++ ++ D E L++ + VP+ +G E + ++ G + Sbjct: 409 LITIHGRTKEQRYTKRADWEYLQQCATQAQSVPVFGNGDIFGYEDYEHIRTKCPNIAGVM 468 Query: 230 AASVFHKQIINIGELKA 246 + E+K Sbjct: 469 VGRGALIKPWVFQEIKE 485 >UniRef50_Q8PX79 NifR3-like protein n=3 Tax=Methanosarcina RepID=Q8PX79_METMA Length = 323 Score = 97.9 bits (242), Expect = 3e-19, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 73/221 (33%), Gaps = 10/221 (4%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPF--CVAGGIKS-LEDAAKI 92 GAD ++ A KS++ ++ D PF + GG L+ AA Sbjct: 33 LCRRYGADLTYTEMINVDALL--NESRKSFIKGLSSEEDRPFGVQLVGGCPDKLKRAALF 90 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + I+ IT + + + T R Sbjct: 91 IEEEYRPEIIDVNMGCPARCITGAGCGSALLNSPELVYSIILELTESLDTPVSAK--IRL 148 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 + +TL+ + ++K GA + ++ + +G +LE ++ V+ +P+IA+G Sbjct: 149 LGREEKTLEIARLIEKAGASAVTVHGRTAAQMYSGNSNLEGIRAVKNELSIPVIANGDVK 208 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 E DG + +++ YL T Sbjct: 209 DEESAERTLELTGCDGLMIGRAAMGNPFIFKKIRHYLETGE 249 Score = 87.1 bits (214), Expect = 5e-16, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 5/104 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + +A+ + GA + + TA+ + + V + IP Sbjct: 145 KIRLLGRE---EKTLEIARLIEKAGASAVTVHGRTAAQMYSGNSNLEGIRAVKNELSIPV 201 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRF 120 G +K E A + L G D + I A+ +P + ++ Sbjct: 202 IANGDVKDEESAERTLELTGCDGLMIGRAAMGNPFIFKKIRHYL 245 >UniRef50_D2MLS1 TIM-barrel protein, nifR3 family n=1 Tax=Bulleidia extructa W1219 RepID=D2MLS1_9FIRM Length = 234 Score = 97.9 bits (242), Expect = 3e-19, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 53/156 (33%), Gaps = 1/156 (0%) Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 S+ S + I + + A + Sbjct: 1 MTSLISTWVVRFKKIIKSHAGSYLLQDPRQAQKVAKAVVDHSKKPVTVKIRTGWDHQHKN 60 Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 ++ + +++ G I ++ + + +G DLE +K+V++ +P+I +G T+E Sbjct: 61 AVEVAKVLEEAGVSAITIHGRTKSQMYSGTVDLEMIKQVKQAVSIPVIGNGDIKTVEDGK 120 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + VD + + + E+ A+L + Sbjct: 121 RMLEETGVDAIMIGRGLLGRPYFMSEMVAFLNGEEF 156 Score = 96.7 bits (239), Expect = 6e-19, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 70/214 (32%), Gaps = 32/214 (14%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE 71 + VK +H+ + V +AK E G + + T S VD + +V + Sbjct: 43 KKPVTVKIRTGWDHQ-HKNAVEVAKVLEEAGVSAITIHGRTKSQMYSGTVDLEMIKQVKQ 101 Query: 72 VIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + IP G IK++ED ++L G D I I L P ++ + + + Sbjct: 102 AVSIPVIGNGDIKTVEDGKRMLEETGVDAIMIGRGLLGRPYFMSEMVAFLNGEEFIEPSF 161 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 +Y ++ +K G ++ M V + Sbjct: 162 LKRIHLLEEYAIHLSARMG-----------------EKNGIQ--MMRGMASWYVTGMPNC 202 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 Q+KK A T++ + +D Sbjct: 203 SQIKK----------ALSSIHTLKDLQQILKDYK 226 >UniRef50_A4RQU5 Predicted protein n=2 Tax=Ostreococcus RepID=A4RQU5_OSTLU Length = 608 Score = 97.5 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 7/216 (3%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKIL 93 + GAD T+ G + + + R + GG S+ ++L Sbjct: 264 RVCKTLGADITCGEMALCTSLLQGLPSEWALLRRHKSEDIFGVQICGGYPDSVTRCCQLL 323 Query: 94 SF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 D I IN D + ++ A + Sbjct: 324 EDTIDVDFIDINMGCPIDSVC-QKGYGSMMLEKPKKMETVIRAASAALGKCSLTFKTRMA 382 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 + +V + GA + L+ + D E K +E VPLI +G Sbjct: 383 YTDKSRVAHTFAPKVAEWGAAAMTLHGRTRAQRYRSVADWEYTKLTKESSSVPLIGNGDV 442 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + + VD + A + E+K Sbjct: 443 YMQKDYYTHLEEHSVDTCMLARGALIKPWLFTEIKE 478 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 41/158 (25%), Gaps = 2/158 (1%) Query: 35 LAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 A + AE GA + + T + R D + E +P G + +D L Sbjct: 393 FAPKVAEWGAAAMTLHGRTRAQRYRSVADWEYTKLTKESSSVPLIGNGDVYMQKDYYTHL 452 Query: 94 SFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 D + AL P L T + +R + + + Sbjct: 453 EEHSVDTCMLARGALIKPWLFTEIKERRDWDISSRERFDILKSFASFGLEHWGSDTRGVE 512 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 ++ + G + + + Sbjct: 513 STRKYLLEWMSFTYRYTPIGLLDHSYGAAAMTQRPPAF 550 >UniRef50_Q91XI1 tRNA-dihydrouridine synthase 3-like n=12 Tax=Chordata RepID=DUS3L_MOUSE Length = 637 Score = 97.5 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 63/215 (29%), Gaps = 6/215 (2%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKIL 93 + GAD T G++ + + + R + G ++ A++L Sbjct: 309 RICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHPCEDIFGVQLEGAFPDTMTKCAELL 368 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + D ++ L+ + + G V + + Sbjct: 369 NRTIDVDFVDINVGCPIDLVYKKGGGCALMNRSAKFQQIVRGVNGVLDVPLTVKMRTGVQ 428 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIASGGAG 211 + E++ G + L+ +++ D +++ + +PL +G Sbjct: 429 ERVSLAHRLLPELRDWGVALVTLHGRSREQRYTRLADWPYIEQCAKVASPMPLFGNGDIL 488 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E V G + A + E+K Sbjct: 489 SFEDAN-CAMQTGVAGIMVARGALLKPWLFTEIKE 522 Score = 73.6 bits (179), Expect = 7e-12, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 13/142 (9%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITASS-DGRVVDK 63 LDV VK V LA R + G + + + R+ D Sbjct: 414 VLDV--PLTVKMRTGVQER-----VSLAHRLLPELRDWGVALVTLHGRSREQRYTRLADW 466 Query: 64 SWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 ++ + A+ +P G I S EDA + G I + AL P L T + ++ Sbjct: 467 PYIEQCAKVASPMPLFGNGDILSFEDANCAMQTGVAGIMVARGALLKPWLFTEIKEQRHW 526 Query: 123 QCIVVGIDTWYDAETGKYHVNQ 144 T + Sbjct: 527 DISSSERLDILRDFTHYGLEHW 548 >UniRef50_Q96G46 tRNA-dihydrouridine synthase 3-like n=17 Tax=Coelomata RepID=DUS3L_HUMAN Length = 650 Score = 97.5 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 65/215 (30%), Gaps = 6/215 (2%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKIL 93 + GAD T G++ + + + R + G ++ A++L Sbjct: 322 RICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDIFGVQLEGAFPDTMTKCAELL 381 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 S + ++ L+ + + V + + Sbjct: 382 SRTVEVDFVDINVGCPIDLVYKKGGGCALMNRSTKFQQIVRGMNQVLDVPLTVKIRTGVQ 441 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV-CHVPLIASGGAG 211 + E++ G + L+ +++ D + +++ + +PL +G Sbjct: 442 ERVNLAHRLLPELRDWGVALVTLHGRSREQRYTKLADWQYIEECVQAASPMPLFGNGDIL 501 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E A + V G + A + E+K Sbjct: 502 SFEDANRAMQ-TGVTGIMIARGALLKPWLFTEIKE 535 Score = 73.2 bits (178), Expect = 8e-12, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 43/142 (30%), Gaps = 13/142 (9%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITASS-DGRVVDK 63 LDV VK V LA R + G + + + ++ D Sbjct: 427 VLDV--PLTVKIRTGVQER-----VNLAHRLLPELRDWGVALVTLHGRSREQRYTKLADW 479 Query: 64 SWVSRVAEVI-DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 ++ + +P G I S EDA + + G I I AL P L T + ++ Sbjct: 480 QYIEECVQAASPMPLFGNGDILSFEDANRAMQTGVTGIMIARGALLKPWLFTEIKEQRHW 539 Query: 123 QCIVVGIDTWYDAETGKYHVNQ 144 T + Sbjct: 540 DISSSERLDILRDFTNYGLEHW 561 >UniRef50_Q88DK5 tRNA-dihydrouridine synthase B n=460 Tax=Proteobacteria RepID=DUSB_PSEPK Length = 337 Score = 97.5 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 68/220 (30%), Gaps = 7/220 (3%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIP---FCVAGGIKSLEDAAK-IL 93 GA +V +++ KS + R+ E P G + + AAK + Sbjct: 31 LCQRLGAGMVVSEMVSSDMSLWNSRKSSLRRIHEGDPEPRSVQIAGGDAQMMAAAAKANV 90 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GA I IN A + A V + Sbjct: 91 EAGAQIIDINMGCPAKKVCNKAAGSALLRD--EALVSEILHAVVSAVDVPVTLKIRTGWD 148 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 L+ + ++ G + ++ + + G + + + +++ +P+ A+G + Sbjct: 149 RANKNGLNVAKIAEQAGIQALAVHGRTRADLYTGEAEYDTIGAIKQAVSIPVFANGDITS 208 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 E VDG L + E++ YL T Sbjct: 209 PEKARAVLETTGVDGLLIGRAAQGRPWIFREIEHYLRTGE 248 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 47/167 (28%), Gaps = 5/167 (2%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKS 64 ++ +DV +K + + + +AK + G L + T + + Sbjct: 131 VVSAVDV--PVTLKIRTGWD-RANKNGLNVAKIAEQAGIQALAVHGRTRADLYTGEAEYD 187 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQ 123 + + + + IP G I S E A +L G D + I A P + + Sbjct: 188 TIGAIKQAVSIPVFANGDITSPEKARAVLETTGVDGLLIGRAAQGRPWIFREIEHYLRTG 247 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + H+ + + R Sbjct: 248 EHLPAPQLDEVERILLEHLAALHAFYGDVMGVRIARKHVGWYLATRP 294 >UniRef50_Q1RH84 Probable tRNA-dihydrouridine synthase n=59 Tax=Alphaproteobacteria RepID=DUS_RICBR Length = 326 Score = 97.5 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 3/168 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A GA I +N A + ++A + Sbjct: 82 AEAAKMNEDMGAKIIDLNFGCPAKKVVNGYSGSALMRD--EGLAAKIFEAAVKAVKIPVT 139 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + ++ G + ++ + +G D E +K V+E +P+ Sbjct: 140 VKMRMGWDDQTKNAPTLAKIAERSGIQMVTVHGRTRCQFYSGNADWEFIKNVKEAVKIPV 199 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 IA+G EA + DG + + + I ++ YL T Sbjct: 200 IANGDITNFAKAKEALEKSSADGVMVGRGAYGKPWLISQIDHYLKTGE 247 Score = 85.9 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 3/111 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVA 70 V+ VK + + LAK G + + T D ++ V Sbjct: 134 VKIPVTVKMRMGWDDQTKNAP-TLAKIAERSGIQMVTVHGRTRCQFYSGNADWEFIKNVK 192 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRF 120 E + IP G I + A + L AD + + A P LI+++ Sbjct: 193 EAVKIPVIANGDITNFAKAKEALEKSSADGVMVGRGAYGKPWLISQIDHYL 243 >UniRef50_B8LDL7 N-acetyl-glutamate-gamma-semialdehyde dehydrogenase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDL7_THAPS Length = 570 Score = 97.1 bits (240), Expect = 5e-19, Method: Composition-based stats. Identities = 83/325 (25%), Positives = 130/325 (40%), Gaps = 69/325 (21%) Query: 2 LAKRIIPCLDVR---DGQVVKGVQ---------------FRNH-EIIGDIVPLAKRYAEE 42 L KR++ LDVR G +V R +G V LA RY +E Sbjct: 244 LVKRVVVALDVRSNDHGDLVVTKGDQYDVRENEKEGVQEGRGGVRNLGKPVSLASRYYKE 303 Query: 43 GADELVFYDITASSDGRVVDKSWV---SRVAEVIDIPFCVAGGIKSLED----------- 88 GADE+ F +IT+ G + D + ++ I +P V GGI+S ED Sbjct: 304 GADEIAFLNITSFRSGVIEDMPMLQVLEEASKEIFVPLTVGGGIRSYEDPGTGKVYSALE 363 Query: 89 -AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE----------- 136 A++ GADK+SI S ++ + Q + I Y + Sbjct: 364 VASRYFRAGADKVSIGSDSVHAAEEYIASGNTKTGQTSIETISHVYGVQAVVISIDPKRV 423 Query: 137 ------------------------TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 G+ + + + + + GAG Sbjct: 424 YVTSPDAADSKHTVVTLDDSQKGPNGEQYCWYQCTVKGGREARDICAVSVAKAAEALGAG 483 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 EI+LN ++ DG NG+D +K V + +P+IAS GAG HF + F + V ALAA Sbjct: 484 EIMLNCIDMDGQCNGFDHALMKAVSDAVTIPVIASSGAGKESHFSDVFSETSVQAALAAG 543 Query: 233 VFHKQIINIGELKAYLATQGVEIRI 257 +FH++ + I ++K ++ G+ RI Sbjct: 544 MFHRKEVEIADVKKHMEKMGIRARI 568 >UniRef50_A4YI32 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YI32_METS5 Length = 228 Score = 97.1 bits (240), Expect = 5e-19, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 86/236 (36%), Gaps = 18/236 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +++P +D+ G VK V+ R ++GD + +A+ G + D+ A+ +G+ Sbjct: 1 MKVVPSIDISKGMAVKRVRGREGTGLVLGDPLKIAEELRNMGYTSVHLVDLDAA-EGKGD 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + RV + V GGI+ + LS GA K+ +++ A P R+ + Sbjct: 60 NVEVIERVMKDFSEIS-VGGGIRDRSRLERFLSSGATKVVMSTLAFTKPDTFRRVVAGYE 118 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + + + + V G ++ + Sbjct: 119 NRV------------LVSVDYCERKVLIKGWNESAMSFEEAISHVNSLGVRGVIFTYVCN 166 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +G RNG D E + + + +GG G+++ E A+ + Sbjct: 167 EGTRNGIDPE-IGRYVNLVQGEKGYAGGIGSIQDLQE-LDKMGFHFAIVGMSLYAG 220 >UniRef50_C8WHM7 TIM-barrel protein, nifR3 family n=2 Tax=Coriobacteriaceae RepID=C8WHM7_EGGLE Length = 330 Score = 97.1 bits (240), Expect = 5e-19, Method: Composition-based stats. Identities = 26/223 (11%), Positives = 57/223 (25%), Gaps = 6/223 (2%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS---LEDAAKI 92 E+GAD S + + + + G + A Sbjct: 29 LCREQGADLTYTEMVSAKGLSYANEKTRHLLRLAPGEDQVAVQLFGHEPDTMAAQAAWIE 88 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 G ++ I D + + A Sbjct: 89 REMGQSLAYLDINMGCPARKIVSKGDGSALMKDPALAASIVRAVRAAVSRPVTVKFRRGW 148 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 ++ + ++ GA I ++ + + G + + +V+E VP++ +G Sbjct: 149 AEGDETAPEFARRMEDAGACAIAVHGRYAEQLYRGRAEWGAIARVKEAVSVPVVGNGDVR 208 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + + D + A + KA LA + Sbjct: 209 SGADAVAITERTGCDAVMIARAAEGNPWLFAQAKAALAGEPEP 251 Score = 76.3 bits (186), Expect = 9e-13, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 48/151 (31%), Gaps = 3/151 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + A+R + GA + + A R + ++RV E + Sbjct: 139 PVTVKFRRGWAEGDETAP-EFARRMEDAGACAIAVHGRYAEQLYRGRAEWGAIARVKEAV 197 Query: 74 DIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +P G ++S DA A G D + I A +P L + + G Sbjct: 198 SVPVVGNGDVRSGADAVAITERTGCDAVMIARAAEGNPWLFAQAKAALAGEPEPDGPTVE 257 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 + H + E R V + W Sbjct: 258 ERIALARRHARLLSAREGRNIVRMRKHAMWY 288 >UniRef50_C9KMX2 tRNA-dihydrouridine synthase n=3 Tax=Veillonellaceae RepID=C9KMX2_9FIRM Length = 322 Score = 97.1 bits (240), Expect = 5e-19, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 43/157 (27%), Gaps = 3/157 (1%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 AD + N A + A + Sbjct: 92 ADILDFNMGCPAPKIVKNGEGSALMRDPE--RAFAILSAIRKAVKMPVTVKMRKGWDAAS 149 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEH 215 ++ + ++ G I ++ ++ G D E + +V+ +P+IA+G T + Sbjct: 150 VNVVEMAKLAEEAGVDAIAVHGRTREQFYTGRADWEIIGEVKRAVKIPVIANGDVRTFDD 209 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + DG + + YL T Sbjct: 210 LDKIRAVTGCDGVMIGRAAQGNPWIFRQFTHYLETGE 246 Score = 95.2 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 60/190 (31%), Gaps = 8/190 (4%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 V+ VK + + + ++V +AK E G D + + T D + V Sbjct: 133 VKMPVTVKMRKGWDAASV-NVVEMAKLAEEAGVDAIAVHGRTREQFYTGRADWEIIGEVK 191 Query: 71 EVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + IP G +++ +D KI + G D + I A +P + + + G Sbjct: 192 RAVKIPVIANGDVRTFDDLDKIRAVTGCDGVMIGRAAQGNPWIFRQFTHYLETGERLPGP 251 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 A H++ + + IV + +D Sbjct: 252 TMKERAAVILRHLDLLLKYKGDYVGPREMRKHATWY-----TRGIVHGAILRDRFNKAVT 306 Query: 190 LEQLKKVREV 199 E ++ E Sbjct: 307 REDFVEILEE 316 >UniRef50_D2RA64 TIM-barrel protein, nifR3 family n=5 Tax=Actinobacteridae RepID=D2RA64_GARVA Length = 384 Score = 97.1 bits (240), Expect = 6e-19, Method: Composition-based stats. Identities = 24/226 (10%), Positives = 59/226 (26%), Gaps = 8/226 (3%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVA----EVIDIPFCVAGGIKSLEDAAKIL 93 E G D L ++ + + + E + +E A +I+ Sbjct: 35 ICREFGPDGLYVAEMITARALVARNPKALRLCRFAPSEKVRSLQLYGVNPSIVEQATRIV 94 Query: 94 --SFGADKISINSPALADPTLITRLADRF-GVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 AD + +N ++ I + + Sbjct: 95 VDENMADHVDLNFGCPVPKVTRRGGGSALPWKTDLLQEILHRVVSVCEPAGIPVTAKFRV 154 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGG 209 + Q+ G + L+ G+ D +++ ++ E +P+ +G Sbjct: 155 GIDENHETFIQAGHIAQEEGCAAVTLHARTTAEYYGGHSDWQRIGELVETLDIPVFGNGD 214 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 E L F++ G + +++ + Sbjct: 215 IWGAEDALAMFKETGCAGVAIGRGCQGRPWLFADIRNACEGSDNRV 260 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 23/179 (12%), Positives = 48/179 (26%), Gaps = 6/179 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + EEG + + T + D + + E +DIP Sbjct: 151 KFRVGIDEN-HETFIQAGHIAQEEGCAAVTLHARTTAEYYGGHSDWQRIGELVETLDIPV 209 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I EDA + G ++I P L + + V Sbjct: 210 FGNGDIWGAEDALAMFKETGCAGVAIGRGCQGRPWLFADIRNACEGSDNRVNPTLAEVGS 269 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 H+N + + +++ + + +E +++ Sbjct: 270 VILRHLNLLVEFYDG---DERMAVHDLRKHIAWYLKGFPVGGGTRKAFMECESIEDVQR 325 >UniRef50_Q5M689 Possible transcriptional regulator n=25 Tax=Streptococcus RepID=Q5M689_STRT2 Length = 350 Score = 96.7 bits (239), Expect = 6e-19, Method: Composition-based stats. Identities = 21/228 (9%), Positives = 57/228 (25%), Gaps = 14/228 (6%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 +AK + G + + + + GG E + Sbjct: 60 IAKEF-SAGLVVMEMISEKGLLYNNEKTLHMLHIDENEHPMSIQLFGG--DAEGLKRAAD 116 Query: 95 -----FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 AD + IN + + ++ + + Sbjct: 117 FIQTNTKADIVDINMGCPVNKVVKNEAGAKWLKDPDKIYHIVKEVTSVLDIPLTVKMRTG 176 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV-CHVPLIAS 207 ++ + G + ++ ++ + G D E L +V + +P I + Sbjct: 177 W---SDSDLAVENALAAESAGVSALAMHGRTREQMYTGHCDHETLARVAKAITKIPFIGN 233 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA-TQGVE 254 G ++ + VD + ++ + + + Sbjct: 234 GDVRNVQDAKLMIEELGVDAVMVGRAAMNNPYIFTQINHFFETGEELP 281 Score = 84.8 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 7/122 (5%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 + K + LD+ VK + + V A G L + T Sbjct: 157 IVKEVTSVLDI--PLTVKMRTGWSDSDL--AVENALAAESAGVSALAMHGRTREQMYTGH 212 Query: 62 -DKSWVSRVAEV-IDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLAD 118 D ++RVA+ IPF G +++++DA ++ G D + + A+ +P + T++ Sbjct: 213 CDHETLARVAKAITKIPFIGNGDVRNVQDAKLMIEELGVDAVMVGRAAMNNPYIFTQINH 272 Query: 119 RF 120 F Sbjct: 273 FF 274 >UniRef50_D1R8P9 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R8P9_9CHLA Length = 342 Score = 96.7 bits (239), Expect = 6e-19, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 55/208 (26%), Gaps = 6/208 (2%) Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED--AAKILSFGADKISINSPALAD 109 + A + ++ I + G L A I G D + +N D Sbjct: 50 MDALVRHDPNTFRMLDFDKDMHPIGGQLCGSKPQLAAKAAKIIEDLGFDVVDLNCGCPVD 109 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + I + + + Q +K Sbjct: 110 KVTKDGSGSGLLKNPL--LIGEILSEMVAAVKIPVTVKIRAGWDDENLCAEEITQIAEKA 167 Query: 170 GAGEIVLNMMNQDGVRNGY-DLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDG 227 GA I ++ + G + + +K ++ H+ +I +G F D Sbjct: 168 GAKAITIHGRTRQQAYRGPANWDHIKASKQVAKHIKVIGNGDVMDPTSAKRMFEYTGCDA 227 Query: 228 ALAASVFHKQIINIGELKAYLATQGVEI 255 L A Q ++ YL + + Sbjct: 228 VLVARGTMGQPWIAQDILNYLQGGTIRV 255 Score = 84.8 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 20/166 (12%), Positives = 46/166 (27%), Gaps = 4/166 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVA 70 V+ VK + E + + + + GA + + T R + + Sbjct: 138 VKIPVTVKIRAGWDDENLC-AEEITQIAEKAGAKAITIHGRTRQQAYRGPANWDHIKASK 196 Query: 71 E-VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVG 128 + I G + A ++ + G D + + + P + + + I V Sbjct: 197 QVAKHIKVIGNGDVMDPTSAKRMFEYTGCDAVLVARGTMGQPWIAQDILNYLQGGTIRVH 256 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 ++ + R V + + G E Sbjct: 257 TPEDCRQALYEHFLCTERYYNPRQVVIEMRRVGCWYIKSSGGTREF 302 >UniRef50_P44965 tRNA-dihydrouridine synthase B n=20 Tax=Pasteurellaceae RepID=DUSB_HAEIN Length = 330 Score = 96.7 bits (239), Expect = 6e-19, Method: Composition-based stats. Identities = 19/179 (10%), Positives = 48/179 (26%), Gaps = 4/179 (2%) Query: 77 FCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 + AA + +GA I IN A +V Sbjct: 70 QIAGSDPLEMAQAAAINVEYGAQIIDINMGCPAKKVNRKLAGSALLQFPDLVEKILREVV 129 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 V + + + + ++ G + ++ + + G + + +K Sbjct: 130 SAVNVPVTL--KIRTGWDKSNRNCVQIGKIAEQCGIQALTVHGRTRACLFEGEAEYDNIK 187 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 V++ +P+IA+G + D + ++ + + Sbjct: 188 AVKQAIAIPVIANGDIDSARKAKFVLNYTGADAIMIGRAALGNPWLFQAVENLIEHNSI 246 Score = 79.4 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 55/173 (31%), Gaps = 5/173 (2%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDK 63 ++ ++V +K + + + V + K + G L + T + + Sbjct: 127 EVVSAVNV--PVTLKIRTGWD-KSNRNCVQIGKIAEQCGIQALTVHGRTRACLFEGEAEY 183 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGV 122 + V + I IP G I S A +L++ GAD I I AL +P L + + Sbjct: 184 DNIKAVKQAIAIPVIANGDIDSARKAKFVLNYTGADAIMIGRAALGNPWLFQAVENLIEH 243 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 I H+ + + + +Q + Sbjct: 244 NSISQMPSLKEKCGQILRHIQELHQFYGEQKGYRIARKHVAWYLQGIQPDSVF 296 >UniRef50_C5WE57 tRNA-dihydrouridine synthase n=42 Tax=Streptococcus RepID=C5WE57_STRDG Length = 354 Score = 96.7 bits (239), Expect = 7e-19, Method: Composition-based stats. Identities = 23/221 (10%), Positives = 57/221 (25%), Gaps = 14/221 (6%) Query: 38 RYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS- 94 E GA +V I+ + + + GG E + Sbjct: 64 IAKEFGAGLVVMEMISEKGLLYNNEKTLHMLHIDENEHPMSIQLFGG--DAEGLKRAADF 121 Query: 95 ----FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 AD + IN + + ++ + + Sbjct: 122 IQTNTKADIVDINMGCPVNKVVKNEAGAKWLRDPDKIYHIVKEVTSVLDIPLTVKMRTGW 181 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV-CHVPLIASG 208 ++ + G + ++ ++ + G D E L +V + +P I +G Sbjct: 182 ---ADSSLAVENALAAESAGVSALAMHGRTREQMYTGTCDHETLARVSKAITKIPFIGNG 238 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +++ + VD + ++ + Sbjct: 239 DVRSVQDAKFMIEEIGVDAVMIGRAAMNNPYLFTQINHFFE 279 Score = 80.9 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 7/122 (5%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV- 60 + K + LD+ VK + V A G L + T Sbjct: 161 IVKEVTSVLDI--PLTVKMRTGWADSSL--AVENALAAESAGVSALAMHGRTREQMYTGT 216 Query: 61 VDKSWVSRVAEV-IDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLAD 118 D ++RV++ IPF G ++S++DA ++ G D + I A+ +P L T++ Sbjct: 217 CDHETLARVSKAITKIPFIGNGDVRSVQDAKFMIEEIGVDAVMIGRAAMNNPYLFTQINH 276 Query: 119 RF 120 F Sbjct: 277 FF 278 >UniRef50_C7NHA2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NHA2_KYTSD Length = 470 Score = 96.7 bits (239), Expect = 8e-19, Method: Composition-based stats. Identities = 54/254 (21%), Positives = 89/254 (35%), Gaps = 21/254 (8%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 + R+ P +DVR G + Q + D + +GA+ L D+ + G Sbjct: 1 MPLRLWPAVDVRGG---RTAQVDPDSPLSDPQAAVDHWVAQGAERLHLVDLDRA-TGAGE 56 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + + + R+ +P V+GGI S D + LS+GA ++ +S ADP G Sbjct: 57 NDALLERLVRRASVPVEVSGGILSPRDVERALSWGAVAVTTSSALWADPAAALEWLQGCG 116 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + V + T + D ++ G VL Sbjct: 117 AEVQVG------------IDLVGDRVVARGTDLALGPVADLWPDLAGLGERRWVLASAAA 164 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG-----ALAASVFHK 236 DG G DL L+ E LIASGG T + V G + + + Sbjct: 165 DGRMTGPDLAGLRAATEHLTGTLIASGGVSTTGDLVAVSSLRGVAGPAVGEVILGAALYA 224 Query: 237 QIINIGELKAYLAT 250 +++G + L Sbjct: 225 GAVDLGRAQRLLGE 238 >UniRef50_UPI0001BC5FF0 nitrogen regulation protein NIFR3 n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC5FF0 Length = 322 Score = 96.3 bits (238), Expect = 8e-19, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 2/189 (1%) Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + R+ + K + A I G I IN+ + + Sbjct: 50 ILRLRSGNGVQLFGKDTEKMIYSAKYIEKLGVKNIDINAGCPMKRVVHSGHGSALLKSPE 109 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + + E + L + ++ G I ++ + + Sbjct: 110 KIKEILFTLREQLEESTKLSIKIRVG-YDRPENYLQIAKIAEEAGCSHITVHGRTRAQLY 168 Query: 186 NG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 G D +K+++E +P+I +G T E E D+ VDG + A I ++ Sbjct: 169 TGLADWSLIKEIKEHVTIPVIGNGDIFTAEAAKEKIEDSGVDGVMLARGIFGNPWLIRDI 228 Query: 245 KAYLATQGV 253 + L V Sbjct: 229 REMLQYGEV 237 Score = 92.5 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 25/196 (12%), Positives = 63/196 (32%), Gaps = 9/196 (4%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI 73 +K + + + +AK E G + + T + + D S + + E + Sbjct: 127 KLSIKIRVGYDRP--ENYLQIAKIAEEAGCSHITVHGRTRAQLYTGLADWSLIKEIKEHV 184 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 IP G I + E A + + G D + + +P LI + + + + T Sbjct: 185 TIPVIGNGDIFTAEAAKEKIEDSGVDGVMLARGIFGNPWLIRDIREMLQYGEVKTKVSTE 244 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 + +H+ + D + + I + ++ + D + Sbjct: 245 DKIDMAIHHILKTEEDNPQREFVFDVRKHICWYL-----KGIPHSAEYKNRINQSTDYKA 299 Query: 193 LKKVREVCHVPLIASG 208 + ++ + + Sbjct: 300 VVQLLQELKEKIKGES 315 >UniRef50_C7LZ82 Histidine biosynthesis protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ82_ACIFD Length = 246 Score = 96.3 bits (238), Expect = 8e-19, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 21/257 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNH--EIIGDIVPLAKRYAEEGADELVFYDITASSD-GRV 60 ++ +D+ DG+ V+ Q R GD + + GA D+ + G Sbjct: 1 MELVVAVDLLDGEAVRLRQGRFDAPRRFGDPRRYVEGALDAGARWFHVVDLDRARTPGDR 60 Query: 61 VDKSWVS---RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + V + V GG+++ D A++L GA ++ + + + + Sbjct: 61 RNADMVGDLIALVREAGGSVEVGGGVRTARDIAELLETGASRVVLGTALVEE-------- 112 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + + R L+ + RG +L Sbjct: 113 ---TLDELDPEHLVAALDYRRGDEGALEVVVSAWERSGGRRLLEASARLFARGVRTQLLT 169 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD----GALAASV 233 + +DG+ +G DL + + EV V +IASGG + + + GA+ + Sbjct: 170 DVGRDGMASGPDLGTYQGLCEVVPVEVIASGGVASADDLAKLAAIRGARGAVWGAVVGTA 229 Query: 234 FHKQIINIGELKAYLAT 250 + E + Sbjct: 230 LLDGSLGFDEALSACRA 246 >UniRef50_C7RAI7 Phosphoribosyl-ATP diphosphatase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RAI7_KANKD Length = 412 Score = 96.3 bits (238), Expect = 8e-19, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 90/243 (37%), Gaps = 27/243 (11%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 +IP +D+ DG+ V+ Q I ++ L + ++ G E+ D+ A+ G+ + Sbjct: 2 LIPSIDLLDGKAVQLQQGDASRKIVEKDNLFELLEEFSLFG--EVAIIDLNAAL-GKGDN 58 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 K+ + ++ + V GGI++ E A + LS GA KI + + D + Sbjct: 59 KALIKQLIKKFSCR--VGGGIRNYETAREYLSSGAKKIILGTSCREDFVKKLPRSQLIFA 116 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + + + + + + + E + + ++ Sbjct: 117 IDAKGDDWVTH-----------------GWQSSSDNKVAAMIDELQDNCSEFLYTQVEKE 159 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G+ G D E++++V + + + +GG ++ + + + + + Sbjct: 160 GMMQGIDRERIEQVIKQSKIQVTVAGGITDLDDI-KFINKLGANS-QLGMSIYTGKLKLD 217 Query: 243 ELK 245 E Sbjct: 218 EAV 220 >UniRef50_D2U2K4 tRNA-dihydrouridine synthase B n=1 Tax=Arsenophonus nasoniae RepID=D2U2K4_9ENTR Length = 458 Score = 96.3 bits (238), Expect = 9e-19, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 52/179 (29%), Gaps = 4/179 (2%) Query: 77 FCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 + AA+ ++ GA I IN A I+ A Sbjct: 99 QIAGSDPDEMATAARINVANGAQIIDINMGCPAKKVNRKLAGSALLRYPE--LIEKILLA 156 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLK 194 V + + + Q ++ G + ++ + + NG + ++ Sbjct: 157 VVNAVDVPVTLKVRTGWSPEERNCIKIAQLAERCGIQAVTIHGRTRACLFNGAAEYDSIR 216 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 ++ +P+IA+G D + + E++ YL T + Sbjct: 217 AAKQNVTIPIIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLETGEL 275 Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 49/163 (30%), Gaps = 5/163 (3%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVS 67 +DV +K + + +A+ G + + T + + + Sbjct: 160 AVDV--PVTLKVRTGW-SPEERNCIKIAQLAERCGIQAVTIHGRTRACLFNGAAEYDSIR 216 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIV 126 + + IP G I A +L + GAD + I A P + + ++ Sbjct: 217 AAKQNVTIPIIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQHYLETGELL 276 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + HV + + + + +++ Sbjct: 277 PPMPIAEVQCLMQAHVKELHDFYGQGKGIRIARKHVSWYLREH 319 >UniRef50_B0UHM8 TIM-barrel protein, nifR3 family n=6 Tax=Rhizobiales RepID=B0UHM8_METS4 Length = 358 Score = 96.3 bits (238), Expect = 9e-19, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 60/222 (27%), Gaps = 6/222 (2%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI--DIPFCVAGGIK-SLEDAAKIL 93 + GA +V + A R ++ + E + + + E A Sbjct: 45 RIARRCGASAVVSEMVAAEDLARGSAEARLRAEGEGVRPHVVQLAGCDPRWMAEGARLAE 104 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + GAD I +N A A V Sbjct: 105 ANGADVIDVNMGCPAKKVTGGEAGSALMRDLDHAAR--LLAAVREAVAVPVTVKMRLGWD 162 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 D + + G + ++ + G D ++ V E +P++A+G G+ Sbjct: 163 DASRNAPDLARRAEALGLSAVTVHGRTRQQFYAGRADWAAIRAVVEAVSIPVVANGDVGS 222 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + ++ + + +G + A L Sbjct: 223 LAEARACLAESGAAAVMIGRAAVGRPWLVGAVAAGLRGAPAP 264 Score = 76.7 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 3/99 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + LA+R G + + T D + + V E + Sbjct: 152 PVTVKMRLGWDDASRNAP-DLARRAEALGLSAVTVHGRTRQQFYAGRADWAAIRAVVEAV 210 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPT 111 IP G + SL +A L GA + I A+ P Sbjct: 211 SIPVVANGDVGSLAEARACLAESGAAAVMIGRAAVGRPW 249 >UniRef50_Q6MRF1 Transcription regulator homolog yacF n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MRF1_BDEBA Length = 337 Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 19/208 (9%), Positives = 47/208 (22%), Gaps = 5/208 (2%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPA 106 + +S I + G A + G D + +N Sbjct: 41 LVSASGIEYKSDRTLKLMSFDESQRPIGIQLFGEEPEIVARAAQVAEADGCDFVDLNFGC 100 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + V K + + + Sbjct: 101 PVPKVVKKGAGSAILKDPAAVQKMVSTVKAAIKIPLTI--KIRTGWDANSRNATEICNIA 158 Query: 167 QKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 G + ++ + G D + + V+ +P++ +G T + + Sbjct: 159 YNEGVSWVAIHGRTRAQSYTGLADWDFIADVKANTKIPILGNGDILTPRQANLRLQQSGC 218 Query: 226 DGALAASVFHKQIINIGELKAYLATQGV 253 DG + K + + + + Sbjct: 219 DGVMIGRGCLKNPFIFMDALSLWRGEPI 246 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 36/115 (31%), Gaps = 3/115 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 ++ +K + + + EG + + T + + D +++ V Sbjct: 132 IKIPLTIKIRTGWDAN-SRNATEICNIAYNEGVSWVAIHGRTRAQSYTGLADWDFIADVK 190 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQC 124 IP G I + A L G D + I L +P + + + Sbjct: 191 ANTKIPILGNGDILTPRQANLRLQQSGCDGVMIGRGCLKNPFIFMDALSLWRGEP 245 >UniRef50_C0QKE4 Dhs2 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKE4_DESAH Length = 330 Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 61/218 (27%), Gaps = 4/218 (1%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKILS 94 G + + A + + G S+ +AA+ ++ Sbjct: 28 IAKGCGCTLVCSEMVSAKGLEFNSEKTVQLLRTDACERPVSVQIFGAEALSMANAARWIA 87 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 I+ + R + + A + S Sbjct: 88 ERNVADIIDINFGCSVKKVARTGAGVALMKDMDNARAIIRAVRRAVSMPFTIKIRSGWDS 147 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDG-VRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 + + D + + G I ++ R D + +++E+ +P+I +G T Sbjct: 148 SASQAFDIARMAEDNGVDAIAIHPRTAAQGFRGRADWSMIARLKEMLTIPVIGNGDITTP 207 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 E + ++ DG + G ++A L + Sbjct: 208 EQGVAMIQETGCDGVMVGRAAMGNPFIFGGIEALLRGE 245 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 3/125 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 +K + +A+ + G D + + TA+ R D S ++R+ E++ Sbjct: 136 PFTIKIRSGWDS-SASQAFDIARMAEDNGVDAIAIHPRTAAQGFRGRADWSMIARLKEML 194 Query: 74 DIPFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 IP G I + E A I G D + + A+ +P + + + Sbjct: 195 TIPVIGNGDITTPEQGVAMIQETGCDGVMVGRAAMGNPFIFGGIEALLRGEAWNEPSPME 254 Query: 133 YDAET 137 Sbjct: 255 IFQIM 259 >UniRef50_B9MMW4 TIM-barrel protein, nifR3 family n=3 Tax=Clostridia RepID=B9MMW4_ANATD Length = 328 Score = 95.9 bits (237), Expect = 1e-18, Method: Composition-based stats. Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 8/228 (3%) Query: 37 KRYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 + + GAD V I+ A G K +S E + G E A+ + Sbjct: 23 RLCSRFGADVTVTEMISSKALVLGSAKTKDLISFSEEEKIRGVQIFG--NDPEVMAQSVK 80 Query: 95 FGADKISINSPALADPTLITRLA---DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 D+ + + + +L + + + Sbjct: 81 ILQDEFEYHFIDINMGCPVPKLVRSGEGCALMKNPSLAAKIVEEVAKVSRKPVSVKIRKG 140 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 ++ +Q+ GA + ++ + + +G D E ++KV+E +P+IA+G Sbjct: 141 FDDENINAPEFAYILQESGASFVTVHGRTRAQLYSGKADWEIIRKVKEKLKIPVIANGDI 200 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC 258 E +A+ D + ++K VE ++ Sbjct: 201 VDFESAKKAYEVTRADSIMIGRAALGNPWVFLQIKEGFEKGYVETKVL 248 Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 3/110 (2%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAE 71 R VK + + E I A E GA + + T + D + +V E Sbjct: 130 RKPVSVKIRKGFDDENINAP-EFAYILQESGASFVTVHGRTRAQLYSGKADWEIIRKVKE 188 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRF 120 + IP G I E A K AD I I AL +P + ++ + F Sbjct: 189 KLKIPVIANGDIVDFESAKKAYEVTRADSIMIGRAALGNPWVFLQIKEGF 238 >UniRef50_Q1D4M2 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=3 Tax=Bacteria RepID=HIS4_MYXXD Length = 238 Score = 95.6 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 94/251 (37%), Gaps = 17/251 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRN---HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 IP +D+R+G V+ V + + + K++ G D+ A+ G+ Sbjct: 1 MIAIPAIDLREGACVQLVGGSYAAEKVRVEEPLEALKQWRRHGFRAFHVVDLDAAL-GKG 59 Query: 61 VDKSWVSRVAE-VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + + ++ + F V GG++ + +LS GA+ + + + A+ D + +A+R Sbjct: 60 SNADAIFQLTAYERGLTFSVGGGVRDSDRVETVLSGGAEFVVVGTRAIEDAGWLADIANR 119 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 F + +V + T + + + + + G +++ + Sbjct: 120 FPGRVVVAA-----------DVKGREVVTRGWTAGSHRDIREVLAAFEPLPLGGLLVTAV 168 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +++G +G DL +++V L ASGG TME + + Sbjct: 169 HKEGQLSGVDLPLMREVASTSRHRLYASGGVTTMEDLRALAAAGAYGAV-IGMALYTGRL 227 Query: 240 NIGELKAYLAT 250 + + A Sbjct: 228 DASAVAREFAG 238 >UniRef50_B2A3T5 TIM-barrel protein, nifR3 family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3T5_NATTJ Length = 327 Score = 95.6 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 62/205 (30%), Gaps = 6/205 (2%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILS-FGADKISINSPALADPT 111 G + V + + + G K + DAA L G D I +N A Sbjct: 49 GMVYGNKKTEEMVIHHNQGVHYSQQIFGSDPKVMADAAVKLENLGVDSIDVNMGCPAPKI 108 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + ++ + L+ +Q+ G Sbjct: 109 VKNGEGSALLKKPH--LAQEIVREIVNSVNLPVTVKIRKGFDRKSSDPLELALRLQEVGI 166 Query: 172 GEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 + ++ + +G D E + K++ +P+I +G + E + A DG + Sbjct: 167 KALAVHGRTCEQQYSGKADWEVVAKLKNYLDIPVIGNGDIFSSEDAVSALEMTACDGIML 226 Query: 231 ASVFHKQIINIGELKAYL-ATQGVE 254 I + K L + +E Sbjct: 227 GRGLMGNPWLIEQTKGMLIKDEKIE 251 Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 46/154 (29%), Gaps = 3/154 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVI 73 VK + + D + LA R E G L + T D V+++ + Sbjct: 138 PVTVKIRKGFD-RKSSDPLELALRLQEVGIKALAVHGRTCEQQYSGKADWEVVAKLKNYL 196 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 DIP G I S EDA L D I + + +P LI + + + Sbjct: 197 DIPVIGNGDIFSSEDAVSALEMTACDGIMLGRGLMGNPWLIEQTKGMLIKDEKIESPEIH 256 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 K H ++ + Sbjct: 257 EIKNEMKSHFENAIKYYGESKGIAEMRKHISWYL 290 >UniRef50_B0TBQ2 Dihydrouridine synthase tim-barrel nifr3 family protein n=3 Tax=Clostridiales RepID=B0TBQ2_HELMI Length = 331 Score = 95.2 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 21/201 (10%), Positives = 50/201 (24%), Gaps = 6/201 (2%) Query: 53 TASSDGRVVD-KSWVSRVAEVIDIPFCVAGGI--KSLEDAAKILSFGADKISINSPALAD 109 + + + E I + G E A + + GA I IN A Sbjct: 52 DKALTYANRNTMEILDITGEARPIAVQIFGSEPAVMAEAARIVEAAGASIIDINMGCPAP 111 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + + +A V + + ++ Sbjct: 112 KIVRNG--EGACLLKTPDLAVDIAEAVVRAVQVPVTVKMRIGWSSGRIVAPELAPRLEAV 169 Query: 170 GAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGA 228 G + ++ ++ +G D + + +P+I +G + L + Sbjct: 170 GVQALTVHGRTREMFYSGQADWSVIAETVRQVSIPVIGNGDVWEPDDALRMLVETGCAAV 229 Query: 229 LAASVFHKQIINIGELKAYLA 249 + L + Sbjct: 230 MIGRGCMGNPWIFSRLVHWAE 250 Score = 80.1 bits (196), Expect = 6e-14, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 53/187 (28%), Gaps = 8/187 (4%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVA 70 V+ VK + I LA R G L + T D S ++ Sbjct: 140 VQVPVTVKMRIGWSSGRIVAP-ELAPRLEAVGVQALTVHGRTREMFYSGQADWSVIAETV 198 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + IP G + +DA ++L G + I + +P + +RL + Sbjct: 199 RQVSIPVIGNGDVWEPDDALRMLVETGCAAVMIGRGCMGNPWIFSRLVHWAETGEMPPPP 258 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 H+ + R + + I + + D Sbjct: 259 SPEERINQALLHLEHIVALKGEERGVREMRGHLSWYL-----KGIRGASRLRAEINQAPD 313 Query: 190 LEQLKKV 196 E + ++ Sbjct: 314 RESVVRL 320 >UniRef50_A8N483 Putative uncharacterized protein n=2 Tax=Agaricales RepID=A8N483_COPC7 Length = 561 Score = 95.2 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 72/225 (32%), Gaps = 21/225 (9%) Query: 34 PLA--KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE---------VIDIPFCVAGG 82 LA + + GA + I A V+KS+ + + D P V Sbjct: 46 ELAFRRLCRQYGAQLIYTPMINAKMFTDPVNKSYRASAFDIASGEEGDMASDRPLIVQFC 105 Query: 83 IKSLEDA---AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 + AK++ D + IN D R + T Sbjct: 106 ANDPDQLLQSAKVVEKYCDAVDINLGCPQDIAKRGRYGSFLQDD----WPLIYSMINTLH 161 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKV 196 +++ + R +T+++ + +++ GA + + ++ D +++ V Sbjct: 162 VNLSIPVTAKFRVFPDVEKTVEYAKMLERAGAQILTCHGRIREQRGQNTGLADWSKIRAV 221 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +E VP+ A+G + + DG ++A Sbjct: 222 KEAVKVPVFANGNILFQDDIARCLEETGCDGVMSAEGILYNPALF 266 Score = 79.4 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 34/93 (36%), Gaps = 4/93 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 +FR + V AK GA L + G+ D S + V E + +P Sbjct: 171 KFRVFPDVEKTVEYAKMLERAGAQILTCHGRIREQRGQNTGLADWSKIRAVKEAVKVPVF 230 Query: 79 VAGGIKSLEDAAKIL-SFGADKISINSPALADP 110 G I +D A+ L G D + L +P Sbjct: 231 ANGNILFQDDIARCLEETGCDGVMSAEGILYNP 263 >UniRef50_B6YQB2 tRNA-dihydrouridine synthase n=36 Tax=Bacteria RepID=B6YQB2_AZOPC Length = 340 Score = 94.8 bits (234), Expect = 3e-18, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 58/219 (26%), Gaps = 9/219 (4%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKIL 93 GAD + F A + + + I + G K +E A Sbjct: 36 LCKSFGADMVYTEFISADALIRHVDKIQGKLKIINSEHPIAVQIYGQDKDTMVEAARICE 95 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 D + +N + + ++ Sbjct: 96 EMQPDFLDLNFGCPVKKIVRRNAGAGMLRVPK--KMIEITQQVVHSVNIPITVKTRLGWD 153 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH--VPLIASGGA 210 +D + +Q G + ++ + +G D + V+ +P+ +G Sbjct: 154 ENSKIIVDLAERLQDTGIALLTIHGRTGSQMYSGKADWNLIGAVKNNPRMYIPICGNGDI 213 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + + +AF VD + E+K YL Sbjct: 214 VSPQQCEQAFNRYGVDAVMIGRASIGAPWIFQEVKYYLK 252 Score = 74.4 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 5/114 (4%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + IV LA+R + G L + T S D + + V Sbjct: 143 PITVKTRLGWDENSKI-IVDLAERLQDTGIALLTIHGRTGSQMYSGKADWNLIGAVKNNP 201 Query: 74 D--IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 IP C G I S + + + +G D + I ++ P + + Sbjct: 202 RMYIPICGNGDIVSPQQCEQAFNRYGVDAVMIGRASIGAPWIFQEVKYYLKYND 255 >UniRef50_Q1NXZ7 Dihydrouridine synthase TIM-barrel protein nifR3 n=3 Tax=Deltaproteobacteria RepID=Q1NXZ7_9DELT Length = 313 Score = 94.4 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 53/212 (25%), Gaps = 12/212 (5%) Query: 38 RYAEEGA-----DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAA 90 E GA + L + + ++ A + + G E AA Sbjct: 31 LCREYGAGLCYSEMLSCHGLVRRQ---PATIEMLATTAAERPLLMQLFGAEPEVMGEAAA 87 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + D I IN + + + S Sbjct: 88 ILSRLPIDGIDINMGCPVRKVVKKGAGAALMRDPELAAAI-TGAVTAAAGDLPVTVKIRS 146 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGG 209 Q D+ + + GA + ++ G D + V+ VP+I +G Sbjct: 147 GWNHKQINAPDFARLLVAHGAAAVTIHARTWSDGFTGRADWAVIAAVKRAVSVPVIGNGD 206 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G+ E L DG + Sbjct: 207 IGSYEQALAMMAATGCDGVMIGRGALGAPWVF 238 Score = 77.5 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 3/99 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK NH+ I A+ GA + + T S D + ++ V + Sbjct: 139 PVTVKIRSGWNHKQINAP-DFARLLVAHGAAAVTIHARTWSDGFTGRADWAVIAAVKRAV 197 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPT 111 +P G I S E A +++ G D + I AL P Sbjct: 198 SVPVIGNGDIGSYEQALAMMAATGCDGVMIGRGALGAPW 236 >UniRef50_A0LJ96 Putative TIM-barrel protein, nifR3 family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LJ96_SYNFM Length = 352 Score = 94.4 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 25/220 (11%), Positives = 53/220 (24%), Gaps = 10/220 (4%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 A+ GA + I + + + +P V + A+ Sbjct: 40 LMADFGAAMVTTEMVSIQGLVRNQRATLDLCRQ-QHPVGVPLAVQVFGRDPAVMAEAARL 98 Query: 96 ----GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 GA I IN+ + + V Sbjct: 99 VEQGGAALIDINAGCPVRKVVRQGAGAILLKDPDRLAAMVEAVKRA--VSVPVTVKIRVG 156 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 +++ G I ++ + +G D ++ +V+ VP+I +G Sbjct: 157 WDNAANGVAGLARQLVSAGVDAITVHGRTAAQMYSGRADWSRIAEVKAAVAVPVIGNGDV 216 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + E + DG + + Sbjct: 217 TSPELAERMIHETGCDGVMIGRASLGNPWLFAVISRRWGR 256 Score = 80.1 bits (196), Expect = 6e-14, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 60/192 (31%), Gaps = 5/192 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V VK ++ G + LA++ G D + + TA+ D S ++ V Sbjct: 145 VSVPVTVKIRVGWDNAANG-VAGLARQLVSAGVDAITVHGRTAAQMYSGRADWSRIAEVK 203 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + +P G + S E A +++ G D + I +L +P L ++ R+G Sbjct: 204 AAVAVPVIGNGDVTSPELAERMIHETGCDGVMIGRASLGNPWLFAVISRRWGRGARQGDC 263 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI--VLNMMNQDGVRNG 187 W D + + L + + + + Sbjct: 264 PGWNDFLRTAEAHLESFRTMRPRADGHLKKLLIWYSKGCPDSAGLRCRIAGPDGIESMLA 323 Query: 188 YDLEQLKKVREV 199 + ++ Sbjct: 324 AFRSWVHELMAR 335 >UniRef50_D1NSS9 Putative tRNA-dihydrouridine synthase n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSS9_9BIFI Length = 422 Score = 94.4 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 26/221 (11%), Positives = 53/221 (23%), Gaps = 8/221 (3%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVA----EVIDIPFCVAGGIKSLEDAAKIL 93 + G D L ++ + + + E I +E AAKI+ Sbjct: 73 LCEQYGPDGLYVAEMITARALVARNPKALRLCRFAPSERIRSLQLYGVNPSIMEQAAKIV 132 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH-VNQYTGDES 150 AD + +N + + + Sbjct: 133 VDEQMADHVDLNFGCPVPKVTRRGGGSALPWKTDLFTDVVSRVVRVCDAAGIPVTAKIRV 192 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGG 209 + Q+ G + L+ G+ D ++ ++ E VP+ +G Sbjct: 193 GIDHEHETFHEAGHIAQEEGCKAVTLHARTTAEYYGGHSDWSRIGELVEQLDVPVFGNGD 252 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 L G + ++K A Sbjct: 253 IWGAADALAMVEQTGCAGVAIGRGCQGRPWLFADIKHAFAG 293 >UniRef50_B8GCQ5 TIM-barrel protein, nifR3 family n=6 Tax=Chloroflexi (class) RepID=B8GCQ5_CHLAD Length = 351 Score = 94.0 bits (232), Expect = 4e-18, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 59/192 (30%), Gaps = 5/192 (2%) Query: 63 KSWVSRVAEVIDIPFCVAGGIKSL-EDAAKILS-FGADKISINSPALADPTLITRLADRF 120 + + E + ++G L +AA+++ GAD I IN + Sbjct: 72 HRLLDYLPEERPLTMQISGNDPDLVANAARVVEQLGADIIDINCGCPSPKVTGGGHGSAL 131 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + V + ++ Q + G + L+ Sbjct: 132 LRDLPKMERLLRAVRAAVQIPVTL--KLRAGWDEASLNFIEAGQRAEAAGVAALTLHPRT 189 Query: 181 QDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 ++ G D ++ ++ +P+I SG T + L RD+ DG + Sbjct: 190 REQGYKGQADWSRVAALKRAVSIPVIGSGDVVTAQDALIRLRDSGADGVMIGRGAIANPW 249 Query: 240 NIGELKAYLATQ 251 ++ + Sbjct: 250 IFRQVADLRQGR 261 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 3/160 (1%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + + + +R G L + T + D S V+ + + IP Sbjct: 156 KLRAGWDEASL-NFIEAGQRAEAAGVAALTLHPRTREQGYKGQADWSRVAALKRAVSIPV 214 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 +G + + +DA L GAD + I A+A+P + ++AD + Sbjct: 215 IGSGDVVTAQDALIRLRDSGADGVMIGRGAIANPWIFRQVADLRQGRTPFEPTPADKYHL 274 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 +Y R + + + L + G+ + + Sbjct: 275 LLEYMAIYAEELPERLALNKIKQLIGQFYIGLPGSNHLRV 314 >UniRef50_A6CBK4 Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 family protein n=2 Tax=Planctomycetaceae RepID=A6CBK4_9PLAN Length = 365 Score = 94.0 bits (232), Expect = 4e-18, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 60/218 (27%), Gaps = 9/218 (4%) Query: 37 KRYAEEGADELV---FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLEDAAKI 92 + E G L + +G E + G + ++DAA++ Sbjct: 45 RIVRELGGVGLATTDLVNARGLLEGSEKTLQLTQTCPEDSPFAVQIFGSEPQQMKDAAQL 104 Query: 93 LSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 L G I IN + + + + Sbjct: 105 LESRGVHSIDINMGCPVNRIVKGGAGASMMCRPSDTVS--LVQTVVEAVKIPVSVKMRLG 162 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH-VPLIASGG 209 ++ + +E +K G + ++ ++ G + + +++V E +P+I +G Sbjct: 163 WDDSELSAPFFSREFEKVGVVAVAIHGRTREQGFRGVVNHDGIRRVVEAVDSIPVIGNGD 222 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + + G +L + Sbjct: 223 VTNVAEADFMLKTTGCAGVSIGRGALANPWIFRQLVQW 260 Score = 74.4 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 4/111 (3%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V+ VK + + ++ + + G + + T R V+ + RV Sbjct: 151 VKIPVSVKMRLGWDDSELSAPF-FSREFEKVGVVAVAIHGRTREQGFRGVVNHDGIRRVV 209 Query: 71 EVID-IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADR 119 E +D IP G + ++ +A +L G +SI ALA+P + +L Sbjct: 210 EAVDSIPVIGNGDVTNVAEADFMLKTTGCAGVSIGRGALANPWIFRQLVQW 260 >UniRef50_C0WXE8 Imidazole glycerol phosphate synthase n=2 Tax=Lactobacillus fermentum RepID=C0WXE8_LACFE Length = 188 Score = 94.0 bits (232), Expect = 4e-18, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 7/194 (3%) Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V +++ + +P V ++++ + +L GADK+ I++ ++ P I ++A F Sbjct: 2 LDMVEAISQQVFMPMTVVCNVRTVVEVRNLLLAGADKVGISTRSIMAPDFIPKVAQVF-- 59 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 G + T+ + +W V + G GE+++N M++D Sbjct: 60 -----GNQSIVAILDYHVDPRTNRKIVCTPGNTELDAYEWTLRVVELGVGELLVNSMDRD 114 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G NG+D + + +P++ASGGAG+ F E F ++ V GA+AAS FH + I Sbjct: 115 GTENGFDTAFYRDLTTTLTIPVVASGGAGSTVDFEEVFVNSGVTGAMAASAFHLDQMTIS 174 Query: 243 ELKAYLATQGVEIR 256 E+K L +G+ +R Sbjct: 175 EVKETLLEKGILVR 188 >UniRef50_C1ZGV0 tRNA-dihydrouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGV0_PLALI Length = 322 Score = 94.0 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 9/219 (4%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRV----AEVIDIPFCVAGGIKS-LEDAAKI 92 ++GA + + + D DK + + AE + E A I Sbjct: 28 ICKQQGASLVC-SERIDAKDVAERDKRAIKLLSTTSAERPAVGQISGNDAAQIGEAARVI 86 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 G + +N + Q + + + + Sbjct: 87 EELGFSMVDLNFECPIRRLVGRGEGGALMGQPQRIAELVAAAKQA--VSIPVTVKLRTGP 144 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGYDLEQLKKVREVCHVPLIASGGAG 211 + + ++ Q V++ G I+L+ + + G D + + +V+E +P++ SGG Sbjct: 145 KAGEDTAVETAQRVEQAGGAAIILHARSVEQAYLGGPDWQHVTRVKEAVSIPVLGSGGVR 204 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 T + + + DG + + L Sbjct: 205 TPQDAISFLESSGADGVAIGRGCLGNPWIFQQARTLLFG 243 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 3/110 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-RVVDKSWVSRVAEVI 73 VK V A+R + G ++ + + D V+RV E + Sbjct: 135 PVTVKLRTGPKAGE-DTAVETAQRVEQAGGAAIILHARSVEQAYLGGPDWQHVTRVKEAV 193 Query: 74 DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGV 122 IP +GG+++ +DA L GAD ++I L +P + + Sbjct: 194 SIPVLGSGGVRTPQDAISFLESSGADGVAIGRGCLGNPWIFQQARTLLFG 243 >UniRef50_A6NW05 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NW05_9BACE Length = 307 Score = 94.0 bits (232), Expect = 5e-18, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 54/181 (29%), Gaps = 4/181 (2%) Query: 77 FCVAGGIKSLEDAAKILS--FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 K +E+AA I GAD I IN + + Sbjct: 54 QIFGSDEKCMEEAAAIAGEVSGADIIDINMGCPVPKVANSGDGSGLMRDVDK-AVRVAEA 112 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 G +++ + ++ G + ++ + + G + + + Sbjct: 113 VVRGAGERPVTVKFRLGWDKGSINCVEFAKAMEAAGVSAVAVHGRTRTQMYAGTANWDYI 172 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 ++V++ +P+IA+G R D A+ + +A L + + Sbjct: 173 REVKQAVSIPVIANGDVFDGPAAAHILRYTGADMAMIGRGCFGNPWVFQQARAALEGEEI 232 Query: 254 E 254 Sbjct: 233 P 233 Score = 87.1 bits (214), Expect = 5e-16, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 3/111 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + I + V AK G + + T + + ++ V + + Sbjct: 121 PVTVKFRLGWDKGSI-NCVEFAKAMEAAGVSAVAVHGRTRTQMYAGTANWDYIREVKQAV 179 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 IP G + AA IL + GAD I +P + + + Sbjct: 180 SIPVIANGDVFDGPAAAHILRYTGADMAMIGRGCFGNPWVFQQARAALEGE 230 >UniRef50_O33772 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=10 Tax=Sulfolobus RepID=HIS4_SULSO Length = 232 Score = 93.6 bits (231), Expect = 5e-18, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 93/237 (39%), Gaps = 15/237 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD 62 IIP +D+ G+ VK ++ ++G+ + LA + EG + D+ A+ +G + Sbjct: 3 EIIPSIDISFGKAVKRIRGVRGTGLVLGNPIELANKLYNEGYSRIHVVDLDAA-EGVGNN 61 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + ++ + ++ V GGI+ +E A +++S + + ++ + L + G Sbjct: 62 EMYIKEICKIGFDWIQVGGGIRDVEKAKRLISLDVNALIFSTIVFTNFNLFYNIVREIGN 121 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 ++V ID + E +D +++V + I+L + + Sbjct: 122 NRVIVSIDYDDTKRVLIS----------GWKERSMEIIDGIKKVNELELLGIILTYVTNE 171 Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 G G D +K ++ +GG + ++ D + F+ I Sbjct: 172 GTVKGIDYS-VKDYAKLIRGVKEYAGGVSSDSDIT-FLKNVGFDYIIVGMAFYLNKI 226 >UniRef50_Q7WYR2 Imidazole glycerol phosphate synthase, subunit HisF2 n=3 Tax=Rhizobium RepID=Q7WYR2_RHIL3 Length = 251 Score = 93.6 bits (231), Expect = 5e-18, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 11/220 (5%) Query: 2 LAKRIIPCLDV-RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 + KR+IP L V + ++VK ++F +GD + + + E+ DE+ DI A+ GR Sbjct: 1 MRKRLIPVLLVDQKRRLVKTIEFGERTYVGDPFNVVRLFNEKEVDEICILDIDATRTGRG 60 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 D +V +A +P GGI L+ ++ G +K + + Sbjct: 61 PDLGFVRELATECFMPLAYGGGITELKQCEELNRSGVEKFVLGQG----------ARNSQ 110 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 V I + + + + E +++ +Q G GEI+L Sbjct: 111 LVGAIAADMGSQALVACVDVDGRGAAASCYASSGARQEPIEFCLRLQDAGVGEIILQSKT 170 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 DG RNGYDLE ++ + +P++A GGAG + H +E Sbjct: 171 LDGTRNGYDLELIQSITRKLSIPVVALGGAGDVAHLMEGL 210 >UniRef50_Q2RM54 Dihydrouridine synthase TIM-barrel protein nifR3 n=6 Tax=Clostridia RepID=Q2RM54_MOOTA Length = 334 Score = 93.6 bits (231), Expect = 5e-18, Method: Composition-based stats. Identities = 26/223 (11%), Positives = 59/223 (26%), Gaps = 8/223 (3%) Query: 38 RYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 E GA I+ + + E + + G + E A Sbjct: 32 LAREAGAALTYTEMISAQGLIYNNKNTHALLDLKGEPGPVAVQLFG--REPEIMAAATRI 89 Query: 96 GADKISIN---SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + + P ++ ++ + V Sbjct: 90 AVAAGAAIIDLNMGCPTPKIVKNGEGSALMRDLPRAAAIVAAMVRAAGPVPVTVKMRLGW 149 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 ++ + V GA + ++ + +G D ++V+E VP+I +G Sbjct: 150 DEDSINVVEAARAVVYAGAAAVAIHGRTRSQFYSGRADWSYFRRVKEAVDVPVIGNGDVR 209 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 T + + DG + + ++A L + Sbjct: 210 TARDAVTMLAETGCDGVMVGRGAVGNPWLLTAIRAVLEGRPEP 252 Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 3/154 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI 73 VK + ++V A+ GA + + T S D S+ RV E + Sbjct: 140 PVTVKMRLGWDE-DSINVVEAARAVVYAGAAAVAIHGRTRSQFYSGRADWSYFRRVKEAV 198 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 D+P G +++ DA +L G D + + A+ +P L+T + + +D Sbjct: 199 DVPVIGNGDVRTARDAVTMLAETGCDGVMVGRGAVGNPWLLTAIRAVLEGRPEPPPVDVR 258 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 H+ + T + Sbjct: 259 TRMTMACRHLKLLVELKGETTAVKEMRKHLACYF 292 >UniRef50_Q6AJZ5 tRNA-dihydrouridine synthase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJZ5_DESPS Length = 328 Score = 93.6 bits (231), Expect = 6e-18, Method: Composition-based stats. Identities = 23/211 (10%), Positives = 65/211 (30%), Gaps = 9/211 (4%) Query: 38 RYAEEGAD-----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + GAD + + + + ++ + E + F + G + A + Sbjct: 29 LCHQFGADYTVSEMISCHGL---FYNQQRTLEMLASLPEERPVSFQLFGAEPDIMAKATL 85 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + I+ +T+ + + + + Sbjct: 86 ILNDFQPDMIDINMGCPVRKVTKKGAGAALMSTPELAYDVIRSVVDNTDIPVTVKFRAGV 145 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 T+ +++ ++ GA + ++ + +G D +K+V+E +P+I +G Sbjct: 146 SSTELNGVEFGLMTERAGAAAVAVHGRTRAQAFSGVADRGIIKEVKEALSIPVIGNGDIL 205 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + + L+ + DG + Sbjct: 206 SYQDGLDMMAETGCDGVMVGRGALGNPWVFQ 236 Score = 47.8 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 4/112 (3%) Query: 6 IIPCLDVRD-GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDK 63 I +D D VK + + + V GA + + T + D+ Sbjct: 126 IRSVVDNTDIPVTVKFRAGVSSTEL-NGVEFGLMTERAGAAAVAVHGRTRAQAFSGVADR 184 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLIT 114 + V E + IP G I S +D + G D + + AL +P + Sbjct: 185 GIIKEVKEALSIPVIGNGDILSYQDGLDMMAETGCDGVMVGRGALGNPWVFQ 236 >UniRef50_Q17M24 tRNA-dihydrouridine synthase n=2 Tax=Diptera RepID=Q17M24_AEDAE Length = 578 Score = 93.6 bits (231), Expect = 6e-18, Method: Composition-based stats. Identities = 26/251 (10%), Positives = 69/251 (27%), Gaps = 23/251 (9%) Query: 18 VKGV-------QFRNHEIIGDIVPLA------KRYAEEGADELV--FYDITASSDGRVVD 62 VK F++ + + + E G D +G + + Sbjct: 215 VKLRSPERKKINFKDKLYLS-PLTTVGNLPFRRICKEYGVDITCGEMACSVPIINGMMQE 273 Query: 63 KSWVSRVAEVIDIPFCVAGG---IKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 + R + G + S D + +N D Sbjct: 274 WALTKRHPSEDLFGVQICGHNQKLVSYATQVIAEHADVDFVDLNLGCPIDLIFNQGGGSA 333 Query: 120 FGVQCIV-VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + + + Y ++ + V + ++ GA + ++ Sbjct: 334 LLRRRNILEVMIQSCSRILADYDKEFTVKTRMGIYANKYVAHELVPKFEEWGASLVTIHG 393 Query: 179 MNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDA-DVDGALAASVFH 235 ++ D + +++ + +P+ +G + +L+A A ++ G + Sbjct: 394 RTKEQRYTKKADWDYIRQCAQQAKSIPIYGNGDIFCYQDYLDAKERAPELAGVMVGRGAL 453 Query: 236 KQIINIGELKA 246 + E+K Sbjct: 454 IKPWVFQEIKE 464 Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 41/139 (29%), Gaps = 7/139 (5%) Query: 11 DVRDGQVVKGVQFRNH-EIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSR 68 D VK + + L ++ E GA + + T + D ++ + Sbjct: 354 DYDKEFTVKTRMGIYANKYVAH--ELVPKFEEWGASLVTIHGRTKEQRYTKKADWDYIRQ 411 Query: 69 VA-EVIDIPFCVAGGIKSLEDA--AKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 A + IP G I +D AK + + + AL P + + ++ + Sbjct: 412 CAQQAKSIPIYGNGDIFCYQDYLDAKERAPELAGVMVGRGALIKPWVFQEIKEQKNLDPS 471 Query: 126 VVGIDTWYDAETGKYHVNQ 144 + Sbjct: 472 SSERMDMLKRYVNYGLEHW 490 >UniRef50_Q14SX5 Putative dihydrouridine synthase n=6 Tax=Clostridiales RepID=Q14SX5_RUMFL Length = 332 Score = 93.6 bits (231), Expect = 6e-18, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 61/221 (27%), Gaps = 6/221 (2%) Query: 38 RYAEEGADELVFYDITASS--DGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKIL 93 GA +V ++A + E + + G E +L Sbjct: 32 MCKRYGAAYVVSEMVSAKGICYSDRKTAELCTVTEEERPMAVQLFGSEPDFMAEAVKIVL 91 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + D I IN + T + T + S Sbjct: 92 DYRPDIIDINMGCPVPKVVGTGAGSALMKDPALAAAITEAAVKAAGDT-PVTVKIRSGWS 150 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGT 212 + + ++ G I ++ +D +G D+ +K V+E VP+I +G Sbjct: 151 SDSINAPEMARALEASGTAAIAVHGRTRDMFYSGQSDMNVIKAVKEAVSVPVIGNGDITD 210 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 E E + D + + E+ A + Sbjct: 211 AESCAEMYGRTGCDLVMIGRGSYGNPFIFREIAARMEGSEY 251 Score = 76.7 bits (187), Expect = 8e-13, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 3/116 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVI 73 VK + + I +A+ G + + T D + + V E + Sbjct: 140 PVTVKIRSGWSSDSINAP-EMARALEASGTAAIAVHGRTRDMFYSGQSDMNVIKAVKEAV 198 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 +P G I E A++ G D + I + +P + +A R Sbjct: 199 SVPVIGNGDITDAESCAEMYGRTGCDLVMIGRGSYGNPFIFREIAARMEGSEYQPP 254 >UniRef50_Q9VIS4 CG10463 n=12 Tax=Drosophila RepID=Q9VIS4_DROME Length = 604 Score = 93.2 bits (230), Expect = 6e-18, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 63/218 (28%), Gaps = 9/218 (4%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLEDAAKIL 93 + E GAD G + + R + G L AA+++ Sbjct: 274 RICKEFGADITCGEMACAQPLLKGMGQEWALTKRHQSEDVFGVQLCGNNPNMLNQAAQVI 333 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + D I +N D + + T + + Sbjct: 334 HETAQVDFIDLNIGCPIDLIYQQGGGSALM-RRTNILELTVRSCAALSDRLPFTVKMRTG 392 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCH-VPLIASGG 209 + + + V++ GA + L+ +++ + +++ +P+I +G Sbjct: 393 IYADKSVAHELLPLVEEWGASAVTLHGRSREQRYTKHANWAYIEECAAKAKCMPVIGNGD 452 Query: 210 AGTMEHFLEAFR-DADVDGALAASVFHKQIINIGELKA 246 + E ++E V + + E+K Sbjct: 453 ILSYEDYMERRTLAPHVCSVMIGRGALIKPWIFQEIKE 490 Score = 70.9 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 49/166 (29%), Gaps = 6/166 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRV-AEV 72 VK L E GA + + + + + +++ A+ Sbjct: 384 PFTVKMRTGIYA-DKSVAHELLPLVEEWGASAVTLHGRSREQRYTKHANWAYIEECAAKA 442 Query: 73 IDIPFCVAGGIKSLEDA--AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 +P G I S ED + L+ + I AL P + + ++ G Sbjct: 443 KCMPVIGNGDILSYEDYMERRTLAPHVCSVMIGRGALIKPWIFQEIKEKQAWSP-SSGQR 501 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + Y + + D T+ L+W + + + Sbjct: 502 YEMLQKFCNYGLEHWGSDTKGVETTRRFLLEWQSFLYRYIPEALQT 547 >UniRef50_A6BZR9 Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZR9_9PLAN Length = 355 Score = 93.2 bits (230), Expect = 7e-18, Method: Composition-based stats. Identities = 22/202 (10%), Positives = 53/202 (26%), Gaps = 6/202 (2%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLI 113 G K+ ++ + + GGI + + A + G + +N Sbjct: 62 LSGSRKSKALLTTSPADRPLTIQIFGGITAELVAAARWLEQHGYAAVDLNMGCPMAKING 121 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 R + +E ++ G Sbjct: 122 NGGGARIMCAPD--AACQLVAEVVDAVSIPVTVKMRLGWDRDSITAPLLAREFEQAGVAA 179 Query: 174 IVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAA 231 I ++ ++ G DL+ +++ E +P+I +G T+E + Sbjct: 180 ITVHGRTRNQGFGGTVDLQGIRQTVEAVQQIPVIGNGDVCTVEDAFRMREQTGCEAVSIG 239 Query: 232 SVFHKQIINIGELKAYLATQGV 253 ++ + + V Sbjct: 240 RGAMLDPWIFRKISQAVRDEPV 261 Score = 80.1 bits (196), Expect = 6e-14, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 65/186 (34%), Gaps = 7/186 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + + I + LA+ + + G + + T + VD + + E + Sbjct: 149 PVTVKMRLGWDRDSITAPL-LAREFEQAGVAAITVHGRTRNQGFGGTVDLQGIRQTVEAV 207 Query: 74 -DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 IP G + ++EDA ++ G + +SI A+ DP + +++ + + T Sbjct: 208 QQIPVIGNGDVCTVEDAFRMREQTGCEAVSIGRGAMLDPWIFRKISQAVRDEPVTEP--T 265 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 + ++ + + G E L + + + Sbjct: 266 RDEQIQFLERHFSLMFEQHELYGCRLIRKFAAWYGARLGIPE-DLEDRLRRLESDEEFKD 324 Query: 192 QLKKVR 197 ++++R Sbjct: 325 IIEQIR 330 >UniRef50_B1ZWU6 TIM-barrel protein, nifR3 family n=6 Tax=Verrucomicrobia RepID=B1ZWU6_OPITP Length = 370 Score = 93.2 bits (230), Expect = 8e-18, Method: Composition-based stats. Identities = 21/198 (10%), Positives = 47/198 (23%), Gaps = 6/198 (3%) Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLA 117 V+ AE + + G + + + A GA + IN + Sbjct: 53 PAALKLVASSAEDRPMSIQLFGSVPTEMRDAARICEDLGAQAVDINMGCPVRKVVRVGGG 112 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + D + ++ G + ++ Sbjct: 113 SAMMTELNQTAA--LVRGMIEAVKIPVTAKMRLGWDDENLTAPDLARVLEDAGVAAVFVH 170 Query: 178 MMNQDGVRNG-YDLEQLKKVREVCH-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + +G +L + V + +P+I +G T E G Sbjct: 171 GRTRAQGFSGTVNLAGIAAVVQAVKRIPVIGNGDVTTPEAARAMIEQTGCAGVSIGRGAF 230 Query: 236 KQIINIGELKAYLATQGV 253 L + + Sbjct: 231 YDPWIFRRTHHLLTSGEL 248 Score = 86.3 bits (212), Expect = 8e-16, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 51/162 (31%), Gaps = 4/162 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V+ K + E + LA+ + G + + T + V+ + ++ V Sbjct: 133 VKIPVTAKMRLGWDDENLTAP-DLARVLEDAGVAAVFVHGRTRAQGFSGTVNLAGIAAVV 191 Query: 71 EVID-IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVG 128 + + IP G + + E A ++ G +SI A DP + R + Sbjct: 192 QAVKRIPVIGNGDVTTPEAARAMIEQTGCAGVSIGRGAFYDPWIFRRTHHLLTSGELWPE 251 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + H +Y + + ++ G Sbjct: 252 PGFDERVRVMRRHFERYCEFYGEEKGPRLFRKVAPWYAKRFG 293 >UniRef50_C7PIH0 TIM-barrel protein, nifR3 family n=7 Tax=Bacteroidetes RepID=C7PIH0_CHIPD Length = 354 Score = 93.2 bits (230), Expect = 8e-18, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 69/237 (29%), Gaps = 18/237 (7%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE------VIDIPFCVA 80 E + D A E+GAD + T + + + + + + Sbjct: 20 EDVSDPPFRA-VCKEKGADLMY----TEFISSEGLIRDAIKSRRKLDIFDYERPVGIQIF 74 Query: 81 GGIKSLEDAAKIL--SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 GG + A + + D + IN + + T + Sbjct: 75 GGDEEPMAMAAQIVEATNPDLLDINYGCPVKKVVCKGAGSGILKDIPKMVKLTAAVVKAT 134 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVR 197 K V + + +Q G + ++ + + G D + KV+ Sbjct: 135 KLPVTV--KTRLGWDDDTKNIEEVAERLQDVGIQALTIHGRTRTQMYKGHADWTLIGKVK 192 Query: 198 EVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 H+P+ +G T E + A VDG + E+K ++ T Sbjct: 193 NNPRIHIPIFGNGDICTPEQAIAAREKYGVDGVMIGRAAIGYPWIFNEIKHFMQTGE 249 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 5/158 (3%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE 71 + VK + +I +A+R + G L + T + + D + + +V Sbjct: 135 KLPVTVKTRLGWDD-DTKNIEEVAERLQDVGIQALTIHGRTRTQMYKGHADWTLIGKVKN 193 Query: 72 V--IDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVG 128 I IP G I + E A +G D + I A+ P + + + Sbjct: 194 NPRIHIPIFGNGDICTPEQAIAAREKYGVDGVMIGRAAIGYPWIFNEIKHFMQTGEHLPP 253 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 E K H+ + + + Sbjct: 254 PSVLERVEVCKKHLQHSVQWKGDVVGILEMRRHYTNYL 291 >UniRef50_Q6M9N8 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6M9N8_PARUW Length = 297 Score = 92.9 bits (229), Expect = 9e-18, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 60/204 (29%), Gaps = 6/204 (2%) Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALAD 109 + A + A + I + G S + A I G D + +N D Sbjct: 4 MDALIRHDPHTYHILDYAANMHPIGGQLCGSKPSIAGQAAKIIEELGFDIVDLNCGCPVD 63 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 I + + Q + + VQ V++ Sbjct: 64 KITKDGSGSGLLKTPE--LIGEIVCNMVSAVKIPVTVKIRAGWDEQQIQVENIVQIVEQA 121 Query: 170 GAGEIVLNMMNQDGVRNGY-DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 GA I ++ + G + E +K+ + + +I +G + F + D Sbjct: 122 GAQAICIHGRTRQQGYRGPANWEYIKRGKLAAKSIKIIGNGDVLDGPSAAKMFCETGCDA 181 Query: 228 ALAASVFHKQIINIGELKAYLATQ 251 L A Q + ++ YL + Sbjct: 182 VLVARGTLGQPWIVQDILRYLEGK 205 Score = 77.8 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 62/210 (29%), Gaps = 15/210 (7%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVA 70 V+ VK + + I + + + + GA + + T R + ++ R Sbjct: 92 VKIPVTVKIRAGWDEQQIQ-VENIVQIVEQAGAQAICIHGRTRQQGYRGPANWEYIKRGK 150 Query: 71 -EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 I G + AAK+ G D + + L P ++ + + + Sbjct: 151 LAAKSIKIIGNGDVLDGPSAAKMFCETGCDAVLVARGTLGQPWIVQDILRYLEGKTAICH 210 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 ++ + + + + G ++ + Sbjct: 211 SLEDCRQALYQHFLETLHYHPDQRVCIDMRRVGCWYLKKSSGTRLF------RELISKAS 264 Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 D+E +K + + PL G + E + Sbjct: 265 DVEVIKNL--ILDFPL---GDSTESEDIAQ 289 >UniRef50_Q0BSS6 tRNA-dihydrouridine synthase n=15 Tax=Alphaproteobacteria RepID=Q0BSS6_GRABC Length = 370 Score = 92.9 bits (229), Expect = 9e-18, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 2/167 (1%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 E A + GA+ I IN + + + + V +A V Sbjct: 113 MAEAARIAIDKGAELIDINFGCPVKKVAVGQ-SAGSALMRDEVTAAKILEATVKAVSVPV 171 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVP 203 + + G I ++ + G D + +V++ +P Sbjct: 172 TLKMRMGWDHQSLNAPALAKIAEASGIRMITVHGRTRQQFYEGKADWAFVARVKQATSLP 231 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +I +G T+E EA + DG + + + ++ AYL Sbjct: 232 VIVNGDIQTVEQAAEARAISGADGVMVGRGCYGRPWFPRQVAAYLRD 278 Score = 84.8 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 3/149 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K +H+ + LAK G + + T D ++V+RV + +P Sbjct: 174 KMRMGWDHQSLNAPA-LAKIAEASGIRMITVHGRTRQQFYEGKADWAFVARVKQATSLPV 232 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 V G I+++E AA+ + GAD + + P ++A + + Sbjct: 233 IVNGDIQTVEQAAEARAISGADGVMVGRGCYGRPWFPRQVAAYLRDGVHIPEPPLSERKQ 292 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQE 165 H + + Sbjct: 293 ILLNHYDAMLRCFGTDAGMRLARKHVSWY 321 >UniRef50_C2D6C5 Possible tRNA-dihydrouridine synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6C5_9ACTN Length = 390 Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 27/212 (12%), Positives = 62/212 (29%), Gaps = 7/212 (3%) Query: 46 ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKIL-SFGADKISIN 103 + + + ++ + G + A ++ DK+S Sbjct: 66 MVSVAGLC---MKNQATRELCLPHTAEPNLIVQLFGSDPVQFQRACALVGELLGDKLSCI 122 Query: 104 SPALADP-TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 +A P +T+ + + C A + V + ++ Sbjct: 123 DINMACPVPKVTKRGEGSALMCDPHRACALVRACLREVRVPVTCKIRRGYYMDHESAAEF 182 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + +Q GA + ++ + G + E +K+V E +P+IASG + E Sbjct: 183 GRALQDAGASALAVHGRFAKQLYKGEANWESIKRVVEAVDIPVIASGDVMSAEDACRILY 242 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGV 253 L A + + + + Sbjct: 243 KTQAHAVLIARGTYGNPWIFDDALKIFNKKKL 274 Score = 79.8 bits (195), Expect = 9e-14, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 38/115 (33%), Gaps = 3/115 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 VR K + + + GA L + A + + RV Sbjct: 160 VRVPVTCKIRRGYYM-DHESAAEFGRALQDAGASALAVHGRFAKQLYKGEANWESIKRVV 218 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQC 124 E +DIP +G + S EDA +IL A + I +P + F + Sbjct: 219 EAVDIPVIASGDVMSAEDACRILYKTQAHAVLIARGTYGNPWIFDDALKIFNKKK 273 >UniRef50_Q010A0 tRNA-dihydrouridine synthase (ISS) n=2 Tax=Mamiellales RepID=Q010A0_OSTTA Length = 639 Score = 92.5 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 61/220 (27%), Gaps = 11/220 (5%) Query: 37 KRYAEEGADELVF---YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + + GAD + + G + + V R + GG L L Sbjct: 286 RICTDLGAD-ITVSEMAMASNLLKGDRKEWALVRRHPIEKCFGIQICGGYPDLMTRCAEL 344 Query: 94 ---SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 D I +N D + V Sbjct: 345 LDNEVHCDFIDVNMGCPIDGVCAKGAGGSLMRDTDRLKRVVRSMTSVSSTPVTIKLRMGY 404 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC---HVPLIA 206 +++ D + + + GA L+ ++ + D + + + ++PLI Sbjct: 405 FDDPSRYVAHDIISKAKSWGAYAATLHGRTREQRYSRLADWSYIHRCADASALNNLPLIG 464 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +G T + + E + + + + + E+K Sbjct: 465 NGDVYTYQDWNEQIANEKISTCMIGRGAIIKPWLMTEIKE 504 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 6/166 (3%) Query: 15 GQVVKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEV 72 +K + + + + GA + T R+ D S++ R A+ Sbjct: 395 PVTIKLRMGYFDDPSRYVAHDIISKAKSWGAYAATLHGRTREQRYSRLADWSYIHRCADA 454 Query: 73 I---DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVG 128 ++P G + + +D + ++ I A+ P L+T + ++ Sbjct: 455 SALNNLPLIGNGDVYTYQDWNEQIANEKISTCMIGRGAIIKPWLMTEIKEQRHWDISANE 514 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + + + ++ + G + Sbjct: 515 RLDLFKDFVHYGLEHWGSDSVGVEKTRRYLLEWMSYTHRYVPIGLL 560 >UniRef50_Q9RDC6 Putative uncharacterized protein SCO2497 n=4 Tax=Bacteria RepID=Q9RDC6_STRCO Length = 406 Score = 92.5 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 48/168 (28%), Gaps = 2/168 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + I G + P + + + +A TG + Sbjct: 97 GKAVRMIAEEGLADHIDLNFGCPVPKVTRKGGGSALPYKRHLLRAIVREAVTGAGDLPVT 156 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VP 203 LD + + G I L+ G D + + +++E +P Sbjct: 157 MKMRKGLDDDHLTYLDAGRIAVEEGVTAIALHGRTTAQHYGGTADWDAIARLKEHVPEIP 216 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 ++ +G + E L R+ DG + + +L A + Sbjct: 217 VLGNGDIWSAEDALRMVRETGCDGVVVGRGCLGRPWLFADLVAAFEGR 264 Score = 74.4 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 4/108 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVID-IP 76 K + + + + + + EEG + + T + G D ++R+ E + IP Sbjct: 158 KMRKGLDDDHLT-YLDAGRIAVEEGVTAIALHGRTTAQHYGGTADWDAIARLKEHVPEIP 216 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQ 123 G I S EDA +++ G D + + L P L L F + Sbjct: 217 VLGNGDIWSAEDALRMVRETGCDGVVVGRGCLGRPWLFADLVAAFEGR 264 >UniRef50_C0GJW0 TIM-barrel protein, nifR3 family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJW0_9FIRM Length = 319 Score = 92.1 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 27/219 (12%), Positives = 60/219 (27%), Gaps = 3/219 (1%) Query: 38 RYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 E G + I+ + A+ I + G + A L Sbjct: 28 LAREMGCALVFTEMISAKGAVCAPEQTLKIARFTAQERPIGIQLFGSDPEIFARATELCN 87 Query: 96 GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 G ++ + + + A + + Sbjct: 88 GQAPDLLDINMGCPVKKVAGKGEGCALMRDPDKAYAITKAVCDAATMPVTVKMRKGWDDS 147 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTME 214 + ++ VQ+ GA + ++ + +G D + +V+E VP++ +G + Sbjct: 148 EVNAVEVALAVQEAGAAAVTVHGRTRAQGYSGRADWSVIARVKEALRVPVVGNGDIWEPQ 207 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + D + A + I YL T + Sbjct: 208 DAQRMLQQTGCDAVMLARGVLGNLWLIRRTVHYLETGEL 246 Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 3/157 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + + + + V +A E GA + + T + D S ++RV E + Sbjct: 135 PVTVKMRKGWDDSEV-NAVEVALAVQEAGAAAVTVHGRTRAQGYSGRADWSVIARVKEAL 193 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +P G I +DA ++L G D + + L + LI R ++ + Sbjct: 194 RVPVVGNGDIWEPQDAQRMLQQTGCDAVMLARGVLGNLWLIRRTVHYLETGELLPEPEMA 253 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 H+ ++ + ++ Sbjct: 254 ERVRLACRHLKMVVDEKGEYMGVREMRKHMAWYLKGM 290 >UniRef50_A0Z0J5 TRNA-dihydrouridine synthase B n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z0J5_9GAMM Length = 352 Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 72/273 (26%), Gaps = 43/273 (15%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLA-----------KRYAEEGADELVFYDIT 53 R+IP G + + V LA + E GA V +T Sbjct: 9 RVIPTCLKIGGF-----------KLANPVALAPMAGVTDLPMRELCVELGAGMAVAEMLT 57 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE-----------DAAKILSFGADKISI 102 D ++ + GG++S++ A GAD I I Sbjct: 58 -------SDPKLLASRKSSLRRRHSAKGGLRSVQIVGSEPQQLANAARLNADDGADVIDI 110 Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 N A V V + Q + Sbjct: 111 NMGCPAKKVCKKAAGSALLADEDRVAEILKAVVSA--VDVPVTLKIRTGVSPQQRNGVAI 168 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + + G + ++ + G + ++++ + +P++A+G T L + Sbjct: 169 AKIAEDAGIQLLTVHGRTRADRFKGEAEYHTIERIVDAVSIPVLANGDITTPAQALAVLQ 228 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVE 254 G + + G + LA Sbjct: 229 KTGAAGIMIGRAALGRPWLPGAIAQSLAGLRTP 261 >UniRef50_C6PST5 Dihydrouridine synthase DuS n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PST5_9CLOT Length = 236 Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 42/99 (42%), Gaps = 1/99 (1%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLI 205 + + ++ + + GA I ++ ++ + +G +Q+++ + V +P+I Sbjct: 60 KFRVGIKEDEMIAAEFAKMCEASGADMITIHGRTRNMMYHGTPYFDQIEQAKSVVRIPVI 119 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 A+GG + E + + DG + A + EL Sbjct: 120 ANGGIFSKEDADKMMKLTGADGVMIARYAIENPFIFSEL 158 Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 5/118 (4%) Query: 13 RDGQV--VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK-SWVSRV 69 + G+V VK + + AK GAD + + T + + + Sbjct: 52 KSGKVITVKFRVGIKEDEMI-AAEFAKMCEASGADMITIHGRTRNMMYHGTPYFDQIEQA 110 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIV 126 V+ IP GGI S EDA K++ GAD + I A+ +P + + L + + Sbjct: 111 KSVVRIPVIANGGIFSKEDADKMMKLTGADGVMIARYAIENPFIFSELTHKKIKKDKH 168 >UniRef50_Q3MB47 Dihydrouridine synthase, DuS n=6 Tax=Bacteria RepID=Q3MB47_ANAVT Length = 378 Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 22/213 (10%), Positives = 56/213 (26%), Gaps = 16/213 (7%) Query: 48 VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 + IT + GR V + IP V ++ ++ G D Sbjct: 62 ILAAITENDTGRPVFAQMIGE-----SIPDLV----RTAKELCHYDIAGVDLNMGCPA-- 110 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 P + + + + T + + V Sbjct: 111 --PRIYRKNVGGGLLLSPGKVEQILAELRQAVSDRPLTVKMRVGFENTD-TFYEILDIVN 167 Query: 168 KRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + + L+ + +G + + + + P++A+G + LE Sbjct: 168 RHNIDLLSLHGRTVKDMYHGAVKYDLIAEAVKRVDCPVLANGNIHSATTALEVLERTGAA 227 Query: 227 GALAASVFHKQIINIGELKAYLATQGV-EIRIC 258 G + +++ L + + + + Sbjct: 228 GVMVGRWAIGNPWLFNQIRQALRGEPITPVPLV 260 Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 4/112 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVI 73 VK + + D L + T V ++ + + Sbjct: 144 PLTVKMRVGFENTDT--FYEILDIVNRHNIDLLSLHGRTVKDMYHGAVKYDLIAEAVKRV 201 Query: 74 DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQC 124 D P G I S A ++L GA + + A+ +P L ++ + Sbjct: 202 DCPVLANGNIHSATTALEVLERTGAAGVMVGRWAIGNPWLFNQIRQALRGEP 253 >UniRef50_O67533 Probable tRNA-dihydrouridine synthase n=1 Tax=Aquifex aeolicus RepID=DUS_AQUAE Length = 316 Score = 92.1 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 71/230 (30%), Gaps = 21/230 (9%) Query: 37 KRYAEEGAD-----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + GAD + + + E I V G + E+ A+ Sbjct: 23 RLCRRLGADRTYTELISAVGVLR----NGIPMKLAYFTEEERPIHIQVFG--SNPEEIAQ 76 Query: 92 I-----LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 D I IN L + + +QC + + + Sbjct: 77 ASVVIAKELKPDFIDINFGCSVPKVLRNKA-AGYMLQCPPLMGEVVKETVEALKPYGIPV 135 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLI 205 + R + E V+E+QK G I ++ +G ++K+ ++V VP+I Sbjct: 136 SAKIRLGFEKDEVERIVEELQKAGVSLIAIHARTAKQGFSGKALWHRIKEAKKVASVPII 195 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 SG + F + + DG + E K + +E+ Sbjct: 196 GSGDVKSWRDIERMFEETECDGVMVGRAALSNPWIFKEFKE---KRDIEV 242 Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 42/141 (29%), Gaps = 5/141 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + IV + G + + TA + +V +P Sbjct: 138 KIRLGFEKDEVERIVE---ELQKAGVSLIAIHARTAKQGFSGKALWHRIKEAKKVASVPI 194 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 +G +KS D ++ D + + AL++P + ++ ++ + + E Sbjct: 195 IGSGDVKSWRDIERMFEETECDGVMVGRAALSNPWIFKEFKEKRDIEVGLKERMDFILEE 254 Query: 137 TGKYHVNQYTGDESRTRVTQW 157 +Q Sbjct: 255 LSMMTEYMSREKACAEIKSQI 275 >UniRef50_C9RMP3 Dihydrouridine synthase DuS n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMP3_FIBSS Length = 392 Score = 91.7 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 21/214 (9%), Positives = 57/214 (26%), Gaps = 7/214 (3%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAKILSFGADKISINSPA 106 F + + E + G + A KI + + Sbjct: 56 FVPTDGDAVFNPDGHKQLKFFPEERPFGVQIFGRFPDRMAAAAGKIAERYHPEFIEVNAG 115 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT----GDESRTRVTQWETLDW 162 P + + + ++ + + +D + ++ Sbjct: 116 CPAPKVAGKGSGSGLLRDLPRLQEILHDVKAVLDAKTPEIPLTLKCRIGWDDDSINVMET 175 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 ++ + G + ++ + NG + + + KV +P+I +G ++E E Sbjct: 176 LKIAEGEGVEMLTVHGRTRLQGYNGLANWDWIGKVAAAAKIPVIGNGDVNSVECARERIN 235 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 V G G++ + + Sbjct: 236 TYGVSGVSIGRGAMHNPWIFGQIADAWEGREKHV 269 Score = 77.5 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 3/110 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + +++ K EG + L + T + + W+ +VA IP Sbjct: 160 KCRIGWDD-DSINVMETLKIAEGEGVEMLTVHGRTRLQGYNGLANWDWIGKVAAAAKIPV 218 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIV 126 G + S+E A + ++ +G +SI A+ +P + ++AD + + Sbjct: 219 IGNGDVNSVECARERINTYGVSGVSIGRGAMHNPWIFGQIADAWEGREKH 268 >UniRef50_B8GW86 tRNA-dihydrouridine synthase n=7 Tax=Alphaproteobacteria RepID=B8GW86_CAUCN Length = 335 Score = 91.7 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 7/196 (3%) Query: 64 SWVSRVAEVIDIP----FCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRLAD 118 V R A +P V + + A GA+ I +N + A Sbjct: 57 DVVRRAAVGEGLPLTVIQLVGRDVDFMAQGARMAQEAGAEIIDLNFGCP-AKEVAAGAAC 115 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + + A V + D + + GA + ++ Sbjct: 116 GSALMREPDLAEALVAAAVEAVDVPVTVKMRLGWDIDCLNAPDIARRAEAAGAKAVTVHG 175 Query: 179 MNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 ++ G D + V++ VP++ +G E +A + DG + + + Sbjct: 176 RTRNQFYKGVADWTAVAAVKQAVSVPVLVNGDIVDGETARQALEQSGADGVMIGRGVYGR 235 Query: 238 IINIGELKAYLATQGV 253 G ++A L +G Sbjct: 236 PWIAGAIEAALEGRGF 251 Score = 83.2 bits (204), Expect = 8e-15, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 3/111 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + + + +A+R GA + + T + + D + V+ V + + Sbjct: 140 PVTVKMRLGWDIDCLNAP-DIARRAEAAGAKAVTVHGRTRNQFYKGVADWTAVAAVKQAV 198 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 +P V G I E A + L GAD + I P + + + Sbjct: 199 SVPVLVNGDIVDGETARQALEQSGADGVMIGRGVYGRPWIAGAIEAALEGR 249 >UniRef50_Q090Q9 TRNA-dihydrouridine synthase B n=2 Tax=Cystobacterineae RepID=Q090Q9_STIAU Length = 369 Score = 91.7 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 24/214 (11%), Positives = 49/214 (22%), Gaps = 9/214 (4%) Query: 38 RYAEEGADE-----LVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + GA + + ++ + + V + + A Sbjct: 61 IAFKWGAALCPTELVSAQGLMRANQRTLKYLRFSPEVERPYSLQIFGGEPEAMAQAALVG 120 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + GA I IN + + A + S Sbjct: 121 KAHGAQIIDINMGCPVKKVTKNGAGSALMCEPLRAAR--IVQAIAEATGLPVTCKIRSGW 178 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVRE-VCHVPLIASGGA 210 L E+ G + ++ +D +G+ D + ++ LI +G Sbjct: 179 DAHHRNYLQMAGELFSAGCAALAIHPRTRDQGYSGFADWSVIADLKRHFPDRTLIGNGDV 238 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 T D + EL Sbjct: 239 KTPADARRMRETTGCDFVMIGRGALGNPWIFREL 272 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 40/154 (25%), Gaps = 8/154 (5%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 K + + + +A G L + T D S ++ + Sbjct: 169 PVTCKIRSGWDAH-HRNYLQMAGELFSAGCAALAIHPRTRDQGYSGFADWSVIADLKRHF 227 Query: 74 DIPF-CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 G +K+ DA ++ G D + I AL +P + + Sbjct: 228 PDRTLIGNGDVKTPADARRMRETTGCDFVMIGRGALGNPW----IFRELAGGPPPTPEER 283 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 ++ G+ + + W Sbjct: 284 CAGVLEHFRAHVEFVGEPLGAVRSFRRHMAWYAH 317 >UniRef50_C2KYD0 Dihydrouridine synthase n=4 Tax=Bacteria RepID=C2KYD0_9FIRM Length = 344 Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 18/209 (8%), Positives = 51/209 (24%), Gaps = 7/209 (3%) Query: 54 ASSDGRVVDKSWVSRVAEVIDI--PFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + + + + + A + D I +N Sbjct: 74 KAIYYGNQNTDSLLVHKGEPGLVSAQLFGSDPALMAEMACRIEEDFDGIDVNMGCPVPKV 133 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + + +++ + + G Sbjct: 134 VRNQEGSALMTNLP--LAEQVLSTMAKALKKPLTVKFRIGFTDDAINVVEFAKMAEASGV 191 Query: 172 GEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 + ++ ++ G + + +K+ +E +P+ +G E L VDG Sbjct: 192 ASVTIHGRTREQYYRGKANWQYIKEAKEAVKIPVFGNGDIFQEEDALAMLLSTGVDGVAL 251 Query: 231 ASVFHKQIINIGELKAYLATQGV--EIRI 257 A I + L+ + + Sbjct: 252 ARGIQGNPFLIRACVSLLSEGKKLPPVSL 280 Score = 86.7 bits (213), Expect = 6e-16, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 3/158 (1%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 ++ VK ++V AK G + + T R + ++ Sbjct: 160 LKKPLTVKFRIGFTD-DAINVVEFAKMAEASGVASVTIHGRTREQYYRGKANWQYIKEAK 218 Query: 71 EVIDIPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 E + IP G I EDA + LS G D +++ +P LI + + Sbjct: 219 EAVKIPVFGNGDIFQEEDALAMLLSTGVDGVALARGIQGNPFLIRACVSLLSEGKKLPPV 278 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 E H+ + ++ Sbjct: 279 SLSERKEMMLRHLKLMVEIKGEHLALLEMRKHLSWYME 316 >UniRef50_B9ZKT6 TIM-barrel protein, nifR3 family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKT6_9GAMM Length = 330 Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 3/170 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E A + + GAD I +N A + V E+ + V Sbjct: 81 AEAARENVRRGADVIDLNLGCPAKKVCSKAAGSALLGEPERVRELLTALVESVEVPVTL- 139 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPL 204 + Q G + ++ + G D E + +V +P+ Sbjct: 140 -KMRLGLDRERVNAETIAGIAQDCGIAMLTVHGRTRADAYRGTADYEAIARVVRAVSIPV 198 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +A+G + A + G + + G+++A LA + V Sbjct: 199 LANGDVVDIGSARRALAISGATGLMIGRGAQGRPWLPGQIRASLAGEPVP 248 Score = 72.8 bits (177), Expect = 9e-12, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 3/154 (1%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + E + + +A + G L + T + R D ++RV + IP Sbjct: 140 KMRLGLDRERV-NAETIAGIAQDCGIAMLTVHGRTRADAYRGTADYEAIARVVRAVSIPV 198 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + + A + L+ GA + I A P L ++ + + Sbjct: 199 LANGDVVDIGSARRALAISGATGLMIGRGAQGRPWLPGQIRASLAGEPVPADPAWDARLA 258 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + H+ + + +Q G Sbjct: 259 LIEEHLRALHAQYGEMQGVRIARKHLGWYLQHMG 292 >UniRef50_Q54XQ6 tRNA-dihydrouridine synthase 1-like protein n=1 Tax=Dictyostelium discoideum RepID=Q54XQ6_DICDI Length = 435 Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 18/218 (8%) Query: 38 RYAEEGADELVFYDITASSDGRV------VDKSWVSRVAEVIDIPFCVAGGIKSLE-DAA 90 + GAD + T + + + S E + G AA Sbjct: 70 LCRKYGADMVY----TPMFHSKNFATCKTYRRDYWSTCPEDRPLVVQFCGNEPEWVVKAA 125 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 K + D I +N + ++ + K + + Sbjct: 126 KYIEDHCDAIDLNLGCPQQIARRGNYGSFLLDKPHIILPIVQELHKHIKVPIFC----KI 181 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPLIAS 207 R +T+ ++Q+ G + ++ ++ + + + ++ +RE +P+IA+ Sbjct: 182 RLLPNLDDTIKLALQLQEAGCQLLTIHGRTKEQKGHNSGIANWKAIRTIREQLSIPVIAN 241 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 G E + DG ++A LK Sbjct: 242 GSVVQYEDIDRCLEETGADGVMSAEGILANPSFFSGLK 279 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 56/182 (30%), Gaps = 8/182 (4%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSR 68 ++ K + D + LA + E G L + T G + + Sbjct: 173 IKVPIFCKIRL---LPNLDDTIKLALQLQEAGCQLLTIHGRTKEQKGHNSGIANWKAIRT 229 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLA-DRFGVQCIV 126 + E + IP G + ED + L GAD + LA+P+ + L + V Sbjct: 230 IREQLSIPVIANGSVVQYEDIDRCLEETGADGVMSAEGILANPSFFSGLKVPIYQVAREY 289 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + Y + + + + V G +I+ ++ ++ Sbjct: 290 IDFTEIYKTSIHVTRSHIFKMLKEKLDVYSDLRETMGATHTNDGFRDIITDLETREKNNL 349 Query: 187 GY 188 Sbjct: 350 PP 351 >UniRef50_C4QMR1 tRNA-dihydrouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4QMR1_SCHMA Length = 441 Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 49/178 (27%), Gaps = 10/178 (5%) Query: 4 KRII--PCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG--- 58 K II L++ K F + V AK GA L + T G Sbjct: 121 KEIISRASLELNVPVTCKIRIF---SDVERTVQYAKLLEAAGASMLTVHGRTREMKGQKT 177 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLA 117 + D + + V E + IP G I+ L D + L AD + L +P L + Sbjct: 178 GLADWNQIRAVKEAVKIPVIANGNIQYLSDVHQCLDSTKADAVMSAEGHLHNPALFLGIQ 237 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTG-DESRTRVTQWETLDWVQEVQKRGAGEI 174 C + + +G EI Sbjct: 238 PCIYDMCFEYLDLVEKYPTSMQIIRGHIFKLCHHALDEHSEYRSLIGTSQSTKGIKEI 295 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 23/197 (11%), Positives = 56/197 (28%), Gaps = 8/197 (4%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLEDAAKILSFGADKISINSPAL 107 + TA +S + +E + + AK++ D + +N Sbjct: 41 MINSTAFLINMKYRRSCLQFASEDRPLIVQFCANSPDTFVRCAKLVQPFCDAVDLNLGCP 100 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + +N + R T+ + + ++ Sbjct: 101 QGIAKRGHYGAFLQDE----WNSLKEIISRASLELNVPVTCKIRIFSDVERTVQYAKLLE 156 Query: 168 KRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 GA + ++ ++ D Q++ V+E +P+IA+G + + Sbjct: 157 AAGASMLTVHGRTREMKGQKTGLADWNQIRAVKEAVKIPVIANGNIQYLSDVHQCLDSTK 216 Query: 225 VDGALAASVFHKQIINI 241 D ++A Sbjct: 217 ADAVMSAEGHLHNPALF 233 >UniRef50_A8J121 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J121_CHLRE Length = 368 Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 46/169 (27%), Gaps = 3/169 (1%) Query: 86 LEDAAKIL--SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 LE A ++L G + +N ++ + Sbjct: 63 LEQAVRLLVCEHGVQHVDLNFGCPVRKITARGGGSALPLRPRLFAKLVAAAVAGAGGEAP 122 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGYDLEQLKKVREVCHV 202 L + + GA +VL+ D + + D ++ + E + Sbjct: 123 VTVKFRVGLTPELPTHLQAGRIAEAEGAAALVLHARTADQLYASPVDWAAVRALVEAVRI 182 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 P++ +G L R+ G + + E+ A L Sbjct: 183 PVVGNGDVFEGADALRLLRETGCAGVMVGRAAVGRPWVFDEVAAALTGA 231 Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 3/145 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVI 73 VK E+ + + EGA LV + TA VD + V + E + Sbjct: 122 PVTVKFRVGLTPELPTH-LQAGRIAEAEGAAALVLHARTADQLYASPVDWAAVRALVEAV 180 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 IP G + DA ++L G + + A+ P + +A Sbjct: 181 RIPVVGNGDVFEGADALRLLRETGCAGVMVGRAAVGRPWVFDEVAAALTGAPPPPPPRLG 240 Query: 133 YDAETGKYHVNQYTGDESRTRVTQW 157 H ++ Sbjct: 241 EVVAAALRHAEMEVDWYRGYHDSER 265 >UniRef50_C5F231 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=C5F231_9HELI Length = 317 Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 22/219 (10%), Positives = 62/219 (28%), Gaps = 11/219 (5%) Query: 40 AEEGAD-----ELVFYDITASSDGRVVDKSWVSRVAEVIDIP-FCVAGGIKSLEDAAKIL 93 + GAD + + + + + + + ++ A + L Sbjct: 29 KKFGADITVSEMISVHAL--AFKNKK-TIKMIEKSPLENPFALQIAGNDFGIIQKAVEFL 85 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + ++I I P + + V Y + R Sbjct: 86 NEFKNEIQILDLNCGCPAPKVSSHGSGSSLLKDLNKLVKILQLLRETSVFPYLSVKVRLG 145 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREVCHVPLIASGGAG 211 + L+ + +V++ + D + ++ +++ PLIA+G Sbjct: 146 FDKKIPLEIANALNDSPIDYVVVHGRTKSDGYKKDKIDYDSIRLIKQNIQHPLIANGEIT 205 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + + + +G + ++ ++K L Sbjct: 206 SPQIAKKVQELTGAEGVMIGRAAIEKPWIFTQIKNNLEE 244 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 6/112 (5%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR--VVDKSWVSRVAEVI 73 VK + +I + +A + D +V + T S + +D + + + I Sbjct: 138 LSVKVRLGFDKKI---PLEIANALNDSPIDYVVVHGRTKSDGYKKDKIDYDSIRLIKQNI 194 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQC 124 P G I S + A K+ GA+ + I A+ P + T++ + Sbjct: 195 QHPLIANGEITSPQIAKKVQELTGAEGVMIGRAAIEKPWIFTQIKNNLEESI 246 >UniRef50_C9RDL3 HisA/hisF family protein n=3 Tax=Methanococcales RepID=C9RDL3_METVM Length = 229 Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 87/258 (33%), Gaps = 41/258 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYDITA 54 IIP +D++ V G + D + LAK Y E+G++ + D+ Sbjct: 1 MHIIPVIDIKGNIAVHGKSGMRSKYQPLKSVICETSDPICLAKSYKEKGSEMVYIADLD- 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 + G + + + + I V GIK+ ED ++ L Sbjct: 60 AICGEGDNFNLIKNI---DFINKIVDAGIKTREDLERVRE-----------YLNKNDKAI 105 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + ++ + + + YT +E V + + Sbjct: 106 IATETLIDKELISEKNIIVSLDFKDGKLLNYTVEEVLGLVRKDTP--------------L 151 Query: 175 VLNMMNQDGVRNGYDLEQLKKVRE--VCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ ++ G G +++ + + + P+ GG + + + +DG L + Sbjct: 152 IILDISSVGTGRGINMKLINMILKLNKGKNPIYVGGGIRDITDIEKC-YNLGIDGVLVGT 210 Query: 233 VFHKQIINIGELKAYLAT 250 H+ +I++ E+ Sbjct: 211 AIHRGVIDLEEVIKKFEK 228 >UniRef50_Q4JIN2 Orf17 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN2_9BACT Length = 248 Score = 91.3 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 84/249 (33%), Gaps = 26/249 (10%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI------------IGDIVPLAKRYAEE-GADELVFY 50 R+I +D+ G+ V R + +GD LA+ Y E G EL Sbjct: 1 MRVIGVIDLAAGRAVHARGGRRTDYAPVRLSGAAAAHVGDPCALARTYLETRGLTELYVA 60 Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 D+ + G + + + + P + G+ S+ A L GA + + L Sbjct: 61 DLD-AIGGGPSQDAAIGALIR-LGAPLWLDSGVHSVPRARHALGLGASFVVVGLETLPSY 118 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 +++ + G + + +D + G Sbjct: 119 DVLSEICADVGSERVAFSLDLRDGLP----------ITAHADVAAGRSVEQIAARAVEAG 168 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 G I++ + + G+ G DL + +R V L+A GG E + A DG L Sbjct: 169 VGAIIVIDVARVGMGEGVDLALISSLRSVAPAVLLAGGGVRGSEDL-ASLAHAGCDGVLV 227 Query: 231 ASVFHKQII 239 A+ H I Sbjct: 228 ATALHDGRI 236 >UniRef50_Q1IKB1 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Acidobacteria RepID=Q1IKB1_ACIBL Length = 228 Score = 90.9 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 93/238 (39%), Gaps = 15/238 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEI-IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 +IP +D+ G++V+ VQ D +R+ G + D+ A+ + ++ Sbjct: 2 LIPSIDLMGGKIVQLVQGEKKAFETTDFDAWCERF--AGFPMVQLIDLDAAKR-QGDNRE 58 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 ++ + + +P V GG++ + A ++L+ GA ++ + S + D + A +C Sbjct: 59 LIANIV--LRLPCQVGGGVRDADVAERLLAIGAKRVIVGSSYIRDGRVDVDFARGLAERC 116 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + D+ G V + + T + G + ++ +G+ Sbjct: 117 GTDRVIAAIDSREGFVAVR-------GWQESVPITAGEMIAALTPYVGGFLYTHVDTEGL 169 Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G+ + +++R + LIA+GG + E E VD + + + Sbjct: 170 LVGFPTDIARRLRTLTEKQLIAAGGIRSQEEIDE-LDGIGVDAV-VGMAIYTGKLVVK 225 >UniRef50_A9GW95 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GW95_SORC5 Length = 328 Score = 90.9 bits (224), Expect = 4e-17, Method: Composition-based stats. Identities = 19/153 (12%), Positives = 42/153 (27%), Gaps = 1/153 (0%) Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 + P + R A ++ + + Sbjct: 97 AFLDINCGCWVPKIAGRGAGAGWLRDPEAMVAMARLVTRSVALPVTVKTRIGWGPESHMP 156 Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFL 217 +D + ++ G + ++ +G D + REV +P++ +G T + Sbjct: 157 IVDLARRLEDAGVAALTIHCRTAQMGHSGAADWGWAARAREVVSIPVVVNGDIKTADDAA 216 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 A R+ G + E +A L Sbjct: 217 RALRETGCAGVMVGRAAIDHPWIFREARALLDD 249 Score = 82.1 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 2/113 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVI 73 VK E IV LA+R + G L + TA D W +R EV+ Sbjct: 140 PVTVKTRIGWGPESHMPIVDLARRLEDAGVAALTIHCRTAQMGHSGAADWGWAARAREVV 199 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCI 125 IP V G IK+ +DAA+ L G + + A+ P + Sbjct: 200 SIPVVVNGDIKTADDAARALRETGCAGVMVGRAAIDHPWIFREARALLDDGVH 252 >UniRef50_Q4J8J0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Sulfolobus acidocaldarius RepID=Q4J8J0_SULAC Length = 226 Score = 90.5 bits (223), Expect = 5e-17, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 97/236 (41%), Gaps = 20/236 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 +++P +D+ + VK ++ + I+GD + +AK EG D + D+ A+ +G Sbjct: 1 MKVMPSIDISNKVAVKRIRGKGGSGIILGDPLKIAKEIISEGYDAIHIVDLDAA-EGLGD 59 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +K + ++ + V GG++ LE A IL + I +++ + + ++ G Sbjct: 60 NKDIIKQICTLGFSWTQVGGGVRKLEIAKDILEY-CSSIVVSTLPITNRQEYDKIISGVG 118 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 V + + ID + + + S + G ++ + Sbjct: 119 VDKVFLSIDYDDNGYVLIKGWKEKSVKVSDLLDLES--------------GGVIFTYIPN 164 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +G + G D ++ V+ V + +GG G+++ L+ + D ++ F+ Sbjct: 165 EGTKGGIDNNVVEYVKSVKKIK-EYAGGIGSLDDLLK-LKSFGFDYSIIGMSFYNG 218 >UniRef50_Q0F181 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F181_9PROT Length = 341 Score = 90.5 bits (223), Expect = 5e-17, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 63/223 (28%), Gaps = 7/223 (3%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL--EDAAKI 92 + G +V A GR + + + +AG E A Sbjct: 35 RICKRFGVGLMVTEMIASRAVDMGRERTERMAELGDDEHPVSIQIAGSDPEFVTEAARWA 94 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + GAD + IN +V V + Sbjct: 95 VGHGADFVDINMGCPVKKICKQVAGSAMLRDEALVARVLAAVVAAVDVPVTL--KIRTGW 152 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAG 211 + + + G + ++ + + +G+ E + + +P+I +G Sbjct: 153 DDQSKNVQNIARIAEDSGIQLLTVHGRTRAQMFHGHACWEDIGLAKAAVSIPVIGNGDIV 212 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 E E R ++ DG + +GE+ A +A + Sbjct: 213 DAESAREMIRVSNCDGVMVGRAVQGNPWVLGEVHAAIAGLPIP 255 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 39/149 (26%), Gaps = 3/149 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + ++ +A+ + G L + T + + + IP Sbjct: 147 KIRTGWDDQ-SKNVQNIARIAEDSGIQLLTVHGRTRAQMFHGHACWEDIGLAKAAVSIPV 205 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I E A +++ D + + +P ++ + I Sbjct: 206 IGNGDIVDAESAREMIRVSNCDGVMVGRAVQGNPWVLGEVHAAIAGLPIPPKPTAAERWL 265 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQE 165 H+ ++ + Sbjct: 266 IVDEHMRHLVEHHGIRTASKLARKHVIWY 294 >UniRef50_Q1Q3Q8 Strongly similar to tRNA-dihydrouridine synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3Q8_9BACT Length = 341 Score = 90.5 bits (223), Expect = 5e-17, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 55/197 (27%), Gaps = 5/197 (2%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPA 106 ++ + E + F V G + E KI G D I IN Sbjct: 64 VVSVSGIVWNNKKTFKLLDFKEEERPVTFQVVGNDECQITEACKKIEQLGPDIIDINMGC 123 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + + V ++ + + Sbjct: 124 SVSDIAGKGAGAGMLKHPSKISKMFNNLTGSLSVPVTG--KIRLGWDHKTRNYIEVARIL 181 Query: 167 QKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 ++ GA I ++ + +G D + + +V++ +P+IA+G ++ E + Sbjct: 182 EENGASLIAVHGRTRSQYFSGAADWDAIAEVKQSVKIPVIANGDVRSVADIAEIKKRTAC 241 Query: 226 DGALAASVFHKQIINIG 242 DG + Sbjct: 242 DGVMIGRAAIGHPWIFR 258 Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 3/127 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPF 77 K +H+ + + +A+ E GA + + T S D ++ V + + IP Sbjct: 162 KIRLGWDHKT-RNYIEVARILEENGASLIAVHGRTRSQYFSGAADWDAIAEVKQSVKIPV 220 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G ++S+ D A+I D + I A+ P + + + ++ Sbjct: 221 IANGDVRSVADIAEIKKRTACDGVMIGRAAIGHPWIFRYKDRENISGSEKIEMIRYHLDC 280 Query: 137 TGKYHVN 143 +Y+ + Sbjct: 281 MKEYYGH 287 >UniRef50_O26765 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase related protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26765_METTH Length = 227 Score = 90.5 bits (223), Expect = 5e-17, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 83/246 (33%), Gaps = 33/246 (13%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYD 51 ML IIP +D+ DG V G + D V +A GA + D Sbjct: 1 ML--EIIPVIDLMDGIAVSGKSGEREKYRPLESVYSPSPDPVNIALSLRAAGARSIYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + +G + V RV +P + G++ LE +L F A ++ + + L Sbjct: 59 LD-AIEGTGSNLEAVRRV--NHVLPVILDAGVRDLETFHFMLEF-ASRVVVATETLESTE 114 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + + + VV V + E D + + Sbjct: 115 ELEEILRNYPPERTVVS-----------VDVKDMRLHSRNLEIGLEELRDLLMGYEVD-- 161 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 I+L + G +G++ E L+ R + +I GG E E V AL Sbjct: 162 --IILLDIGSVGTSSGFNRELLELFRPLIE-RVIPGGGVL-PEEIPE-LEAMGVRAALVG 216 Query: 232 SVFHKQ 237 H+ Sbjct: 217 RALHEG 222 >UniRef50_Q3JEF8 Histidine biosynthesis n=2 Tax=Nitrosococcus oceani RepID=Q3JEF8_NITOC Length = 235 Score = 90.2 bits (222), Expect = 7e-17, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 83/259 (32%), Gaps = 38/259 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---------GDIVP-LAKRYAEEGADELVFYDIT 53 +++P LD+ G VV + + + +A +L D+ Sbjct: 1 MQLLPVLDLWGGVVVHARGGQRDSYLPLNSPFAPNSSPLQVVAGLLQWCRFQQLYIADLN 60 Query: 54 ASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + G + ++ +A + V GG E A++ + G + + + L D Sbjct: 61 -AIMGDGNNHFMIAAIARSYPDLELWVDGGTARHEAVAQLFALGVARPVVGTETLPDLES 119 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 L + Q + Q Sbjct: 120 WQALQSSWPEQLALSMDHRRGAFLGPAGLDRQPELWPG---------------------- 157 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGAL 229 ++ ++Q G + G D L+++ + + L+A+GG +E + V+G L Sbjct: 158 TVIAMSLDQIGSQQGPDWSLLERLGQRSLRKRISLLAAGGVRCLEDLKQ-LAAWGVEGVL 216 Query: 230 AASVFHKQIINIGELKAYL 248 AS H +N EL+ L Sbjct: 217 LASALHDGSLNPAELQQML 235 >UniRef50_D0WEP2 tRNA-dihydrouridine synthase B n=2 Tax=Slackia RepID=D0WEP2_9ACTN Length = 318 Score = 89.8 bits (221), Expect = 8e-17, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 62/220 (28%), Gaps = 6/220 (2%) Query: 37 KRYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGG---IKSLEDAAK 91 + E+G D I+ A S + + + + G + + E A Sbjct: 11 RLCLEQGCDLTYTEMISSKALSFANEKTRHLLDLAEGERRVAIQLFGHEPKVMAREAAWV 70 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 G I+ I + D + + Sbjct: 71 EDELGDALALIDINMGCPAHKIVKKGDGSALMRDQDLAASIVRDVARAVSCPVTVKFRRG 130 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGA 210 + +D+ ++ GA + ++ + G + E + +V+ VP+I +G Sbjct: 131 FGAEEETAVDFGLRMEDAGAAAVTVHGRTAAQMYRGPSEWECVARVKAALSVPVIGNGDI 190 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + + R DG + A +++ L Sbjct: 191 VSGASAADMVRATGCDGVMIARGAQGNPWIFADVRRVLDG 230 Score = 77.5 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 50/153 (32%), Gaps = 3/153 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVI 73 VK + E V R + GA + + TA+ R + V+RV + Sbjct: 122 PVTVKFRRGFGAEE-ETAVDFGLRMEDAGAAAVTVHGRTAAQMYRGPSEWECVARVKAAL 180 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +P G I S AA ++ G D + I A +P + + Sbjct: 181 SVPVIGNGDIVSGASAADMVRATGCDGVMIARGAQGNPWIFADVRRVLDGMPPAPDPTRQ 240 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 E + H++ + T V + + W Sbjct: 241 DRVEMARRHIHLLSSRLGNTVVYMRKHVMWYLH 273 >UniRef50_D2NNX0 tRNA-dihydrouridine synthase n=3 Tax=Actinobacteridae RepID=D2NNX0_9MICC Length = 442 Score = 89.8 bits (221), Expect = 8e-17, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 49/166 (29%), Gaps = 3/166 (1%) Query: 94 SFGADKISINSPALADPTLITRLADRF-GVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 AD I +N A + I E + + Sbjct: 155 EDRADHIDLNFGCPAPKVTRRGGGAALPWKTDLFTAIVQTAVKEASRNDIPLTIKMRKGI 214 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV-CHVPLIASGGA 210 L+ + + G I L+ +G D + + ++RE+ VP++ +G Sbjct: 215 DDDHITFLESAKIARDAGVAAIALHGRTAAQHYSGKADWDSIAQLRELIPDVPILGNGDI 274 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + E + VDG + + G+L+ IR Sbjct: 275 FSAEDAVRMVEQTGVDGVVIGRGCQGRPWLFGDLQNAFEGSSERIR 320 Score = 77.8 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 60/197 (30%), Gaps = 8/197 (4%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI 73 +K + + + I + AK + G + + TA+ D ++++ E+I Sbjct: 205 PLTIKMRKGIDDDHIT-FLESAKIARDAGVAAIALHGRTAAQHYSGKADWDSIAQLRELI 263 Query: 74 D-IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 +P G I S EDA +++ G D + I P L L + F + Sbjct: 264 PDVPILGNGDIFSAEDAVRMVEQTGVDGVVIGRGCQGRPWLFGDLQNAFEGSSERIRPTL 323 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 ++ H E V + + + DL Sbjct: 324 TEVSDMIYRHAELLVETFGDETRGLREIRKHVAWY----FKGYPVGGELRAKMAQVPDLA 379 Query: 192 QLKKVREVCHVPLIASG 208 +++ + G Sbjct: 380 TFRELIAQLDHSIGYPG 396 >UniRef50_C2G0W0 Possible imidazoleglycerol-phosphate synthase HisF n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G0W0_9SPHI Length = 263 Score = 89.8 bits (221), Expect = 9e-17, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 125/260 (48%), Gaps = 11/260 (4%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA----DELVFYDITASS 56 ML KR+I L DG ++ F + +GDI L K Y DELV +++ S Sbjct: 1 MLRKRVIFTLLYCDGFFMQSRNF-RLQKVGDINWLEKFYKFNKIAFSLDELVILNVSRKS 59 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + VSR+ E +P V GGI+SLEDA + GADKI +N+ +DP L+ + Sbjct: 60 KNQEEFGRTVSRLVEGTYMPVAVGGGIRSLEDAEMLFKSGADKIVLNTSLSSDPDLVKLI 119 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 ++G Q +V ID K + E+ + +++ ++ GE+ L Sbjct: 120 VQKYGSQSVVASIDYL------KKGESSEIFIENGSLNINEGFENYLSHLKDLNVGEVYL 173 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 N M +DG GYD +K V+ + +VPLI +GGAG H EA +++ A A++F+ Sbjct: 174 NSMERDGTGFGYDFSLVKLVKSILNVPLIIAGGAGNEGHLKEALLHSEISAAATANLFNF 233 Query: 237 QIINIGELKAYLATQGVEIR 256 + + + +L G + Sbjct: 234 IGDGLPKARFFLINSGENLA 253 Score = 50.9 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 1/86 (1%) Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 E+V+ +++ + ++ E ++P+ GG ++E E + D + Sbjct: 48 DELVILNVSRKSKNQEEFGRTVSRLVEGTYMPVAVGGGIRSLEDA-EMLFKSGADKIVLN 106 Query: 232 SVFHKQIINIGELKAYLATQGVEIRI 257 + + + +Q V I Sbjct: 107 TSLSSDPDLVKLIVQKYGSQSVVASI 132 >UniRef50_C5TM05 tRNA-dihydrouridine synthase C n=5 Tax=Neisseriaceae RepID=C5TM05_NEIFL Length = 321 Score = 89.8 bits (221), Expect = 9e-17, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 69/209 (33%), Gaps = 10/209 (4%) Query: 52 ITASSDGRVVDKSWVSRVAEV--------IDIPFCVAGGIKSLEDAAKILSFGADKISIN 103 IT + R +V +A + + +A + + FGADKI +N Sbjct: 36 ITHTVHSRATWLKYVPEIAHANRTTAGTPCTVQLLGSDAENMAVNALEAVRFGADKIDLN 95 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 A + + ++ + H+ + L+ Sbjct: 96 FGCPAPTVNKHKGGAVLLKEPDLIYHIVHTLRQRLPQHIPLTAKMRLG-YEDKSLALECA 154 Query: 164 QEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 ++ GA + ++ + E ++K+R+ ++P+ A+G ++ +L+ Sbjct: 155 SAIENGGACALTVHARTKVEGYEPPAHWEWVRKIRDAVNIPVTANGDVFNLQDYLDIKSV 214 Query: 223 ADVDGALAASVFHKQIINIGELKAYLATQ 251 + + + + ++K Y + Sbjct: 215 SGCNSVMLGRGAVIRPDLARQIKQYENGE 243 Score = 67.1 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 44/149 (29%), Gaps = 4/149 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPF 77 K + + + A GA L + T WV ++ + ++IP Sbjct: 139 KMRLGYEDKSL--ALECASAIENGGACALTVHARTKVEGYEPPAHWEWVRKIRDAVNIPV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + +L+D I S G + + + A+ P L ++ + + + Sbjct: 197 TANGDVFNLQDYLDIKSVSGCNSVMLGRGAVIRPDLARQIKQYENGETVKDTDFAEVSSW 256 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQE 165 ++ + S Sbjct: 257 IVQFFDLCLAKEASNKYPVSRLKQWLGMM 285 >UniRef50_B8DSX5 Possible NifR3-like protein n=15 Tax=Bifidobacterium RepID=B8DSX5_BIFA0 Length = 417 Score = 89.4 bits (220), Expect = 9e-17, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 60/228 (26%), Gaps = 10/228 (4%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVA----EVIDIPFCVAGGIKSLEDAAKIL 93 E G D L ++ + + + E I +E AA+ L Sbjct: 68 LCEEYGPDGLYVAEMVTARALVERNPKALRLCRFAPSERIRSLQLYGVNPSIMEQAARFL 127 Query: 94 -SFGA-DKISINSPALADPTLITRLADRF-GVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 G D + +N + I A ++ Sbjct: 128 VDNGMMDHLDLNFGCPVPKVTRRGGGSALPWKTDLFTEIVQRVVAVCEPANIPVTAKIRV 187 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGG 209 L+ + Q+ G + L+ G+ D ++ ++ +P+ +G Sbjct: 188 GLDHEHETFLEAGRIAQEEGCSAVTLHARTTAEYYGGHSDWCRIGELVSTLDIPVFGNGD 247 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 E + + G + G + G ++RI Sbjct: 248 IWGAEDAIAMVNETGCAGVAIGRGCQGRPWLFGNIGNAF--AGSDVRI 293 Score = 64.0 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 9/185 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K +HE + + EEG + + T + D + + +DIP Sbjct: 184 KIRVGLDHE-HETFLEAGRIAQEEGCSAVTLHARTTAEYYGGHSDWCRIGELVSTLDIPV 242 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I EDA ++ G ++I P L + + F + + Sbjct: 243 FGNGDIWGAEDAIAMVNETGCAGVAIGRGCQGRPWLFGNIGNAFAGSDVRINPTLGEVGR 302 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV 196 H T + + +++ + + E LK V Sbjct: 303 IIMRHAELLTEFYDG---DERMAVHDLRKHVAWYLKGFPVGGSTRRAFME---CESLKDV 356 Query: 197 REVCH 201 RE Sbjct: 357 REQVD 361 >UniRef50_Q6AKJ6 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKJ6_DESPS Length = 354 Score = 89.4 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 20/189 (10%), Positives = 53/189 (28%), Gaps = 7/189 (3%) Query: 73 IDIPFCVAGGIKSLEDAAKILS----FGADKISINSPALADPTLITRLADRFGVQCIVVG 128 + P I ++ A L G D + IN A Sbjct: 96 CERPLIYQLFIADVKYVAPALDKIHRLGGDGVDINLGCPAPSVRRGGAGAALAED--WDR 153 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNG 187 + + + + LD+ + ++ G + ++ + + Sbjct: 154 VRDIVSSARRHTDLTLSAKIRVGHVGKEAHLLDFCKMLEAEGVDLLAVHARYHGEKFCRK 213 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + L + E +P+ A+GG +++ + G + ++ E+ Sbjct: 214 PRWQLLAPICEQLDIPIFANGGIFSVDDARRCLELSGAAGLMLGRGAVERPWLFNEIARE 273 Query: 248 LATQGVEIR 256 + + + Sbjct: 274 VYGLDLPVA 282 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 49/156 (31%), Gaps = 3/156 (1%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPF 77 K + ++ K EG D L + R ++ + E +DIP Sbjct: 172 KIRVGHVGKEA-HLLDFCKMLEAEGVDLLAVHARYHGEKFCRKPRWQLLAPICEQLDIPI 230 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 GGI S++DA + L GA + + A+ P L +A + V + Sbjct: 231 FANGGIFSVDDARRCLELSGAAGLMLGRGAVERPWLFNEIAREVYGLDLPVAESRPVEIY 290 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 R E ++ + + G Sbjct: 291 FRFVQKMVEIFAPERQLGRIKEFTHYIAKNHQFGHH 326 >UniRef50_A9UTQ9 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UTQ9_MONBE Length = 328 Score = 89.4 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 10/211 (4%) Query: 37 KRYAEEGADE----LVFYD-ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + + G D ++ D T S R D ++ G + L A + Sbjct: 40 RTVRKHGIDLAYTPMIVADSFTKSQWAREADFHTAEDDRPLVAQFAANNGPV--LAHAVE 97 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 +++ AD +N + L + + + + + R Sbjct: 98 LMAPYADAFCLNCGCPQRWAIQDGLGCALTLNPDAMVDLVRHARAAVP---HHPVSVKVR 154 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 R T ET++ V+ + GA I ++ + LK V++ VP++A+G Sbjct: 155 IRDTAAETVELVRRAEAMGAAWISVHGRTPAERHQPVHYDMLKLVKDSVSVPVVANGDIF 214 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIG 242 T++ + + DG +AA Sbjct: 215 TLKDADRVWNETGCDGIMAARGLLANPGLFE 245 Score = 77.8 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 4/99 (4%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEV 72 VK + + V L +R GA + + T + + V + V + Sbjct: 146 HHPVSVKVRI---RDTAAETVELVRRAEAMGAAWISVHGRTPAERHQPVHYDMLKLVKDS 202 Query: 73 IDIPFCVAGGIKSLEDAAK-ILSFGADKISINSPALADP 110 + +P G I +L+DA + G D I LA+P Sbjct: 203 VSVPVVANGDIFTLKDADRVWNETGCDGIMAARGLLANP 241 >UniRef50_O95620 tRNA-dihydrouridine synthase 4-like n=40 Tax=Metazoa RepID=DUS4L_HUMAN Length = 317 Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 1/168 (0%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I A + L DAA+I+ A+ I IN + + +V Sbjct: 85 IVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINKPELVQDMVKQV 144 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + + + R T+D Q+ + G I ++ + + +K Sbjct: 145 RNQVETPGFSVSI-KIRIHDDLKRTVDLCQKAEATGVSWITVHGRTAEERHQPVHYDSIK 203 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 ++E +P+IA+G +++ +R DG + A Sbjct: 204 IIKENMSIPVIANGDIRSLKEAENVWRITGTDGVMVARGLLANPAMFA 251 Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 2/164 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVID 74 G V ++ R H+ + V L ++ G + + TA + V + + E + Sbjct: 152 GFSV-SIKIRIHDDLKRTVDLCQKAEATGVSWITVHGRTAEERHQPVHYDSIKIIKENMS 210 Query: 75 IPFCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G I+SL++A G D + + LA+P + + Sbjct: 211 IPVIANGDIRSLKEAENVWRITGTDGVMVARGLLANPAMFAGYEETPLKCIWDWVDIALE 270 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + Q + + + + Sbjct: 271 LGTPYMCFHQHLMYMMEKITSRQEKRVFNALSSTSAIIDYLTDH 314 >UniRef50_B7PPV8 tRNA-dihydrouridine synthase, putative n=1 Tax=Ixodes scapularis RepID=B7PPV8_IXOSC Length = 483 Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 58/215 (26%), Gaps = 10/215 (4%) Query: 34 PLAKRY--AEEGADELVFYDITA--SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 LA R GA + A + ++ E + E Sbjct: 30 ELAWRLLGRRHGAQLCYTPMLHASVFLKDPKYRRDALASCDEDQPLVVQFCA--NDPEVL 87 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + L P I R +G + V+ + Sbjct: 88 VQASRLVVGHCCAVDLNLGCPQAIARA-GHYGAFLQDDWDLLARMVQRVHTQVDVPITCK 146 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPLIA 206 R +T+ + Q ++ G + ++ ++ E ++ V+ +P+IA Sbjct: 147 VRVFPEVEKTVRYAQMLEAAGCQVLTVHGRTREQKGPHTGLASWEHIRAVKRSVKIPVIA 206 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +G +E R+ D ++A Sbjct: 207 NGNIQYLEDAERCLRETGADAVMSAEGHLHNPYLF 241 Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 38/144 (26%), Gaps = 7/144 (4%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSR 68 V K F + V A+ G L + T G + + Sbjct: 139 VDVPITCKVRVF---PEVEKTVRYAQMLEAAGCQVLTVHGRTREQKGPHTGLASWEHIRA 195 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVV 127 V + IP G I+ LEDA + L GAD + L +P L T + Sbjct: 196 VKRSVKIPVIANGNIQYLEDAERCLRETGADAVMSAEGHLHNPYLFTGRLAPVWEASLEY 255 Query: 128 GIDTWYDAETGKYHVNQYTGDESR 151 Y Sbjct: 256 LCLVRDHPCPASYVRGHLFKLMHH 279 >UniRef50_D0LJX3 TIM-barrel protein, nifR3 family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJX3_HALO1 Length = 348 Score = 89.0 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 50/174 (28%), Gaps = 3/174 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 ++ A L GA I IN A + + + V Sbjct: 86 VQAAQLALDIGASLIDINMGCPAKRVVAGECGAALMQWPELSAELVRAVVASVPDSVPVT 145 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH--V 202 + ++ + + GA + ++ + G DLE +++VRE V Sbjct: 146 VKHRAGWNPLNRNAPEFACAMVEAGAQMVTVHGRTRTQGFAGSVDLEVIRRVREAVPARV 205 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 P++ +G ++ +L D + L A R Sbjct: 206 PVVGNGDVVCVDDYLRMREHTGCDAVMIGRGALGNPWLFRSLHALAHGLPDPGR 259 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 46/168 (27%), Gaps = 6/168 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVI 73 VK N A E GA + + T + D + RV E + Sbjct: 143 PVTVKHRAGWNPLNRNAP-EFACAMVEAGAQMVTVHGRTRTQGFAGSVDLEVIRRVREAV 201 Query: 74 D--IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 +P G + ++D ++ G D + I AL +P L L D Sbjct: 202 PARVPVVGNGDVVCVDDYLRMREHTGCDAVMIGRGALGNPWLFRSLHALAHGLPDPGRPD 261 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK-RGAGEIVLN 177 HV + ++ + GA + Sbjct: 262 MAERYRVFCEHVALLYALKGGPKLIHEVRKACAWYAKGLDGADGFRQH 309 >UniRef50_A7H1K2 tRNA-dihydrouridine synthase B n=14 Tax=Campylobacter RepID=A7H1K2_CAMJD Length = 308 Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 64/213 (30%), Gaps = 12/213 (5%) Query: 40 AEEGADELVFYDI---TASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSF 95 + GAD + ++ A + R I G + L+ A ++L+ Sbjct: 27 KKFGAD-ITISEMISSNALVYESSKTLHMLERAELENPYIVQIAGGDKEVLKKAVQMLNK 85 Query: 96 G--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 D I N + + + E K + + R Sbjct: 86 MDFVDGIDFNCGCPVNKVVKQCAGSALLENLELFKNLVGVIKENNKKSLT---SVKFRLG 142 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 + + + G + ++ + + +G D E + + +P+IA+G Sbjct: 143 FNEKYPEKMAKICESLGVDFVSVHGRTRKQLYSGKADYESIASAKASVKIPVIANGDI-N 201 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 ++ E ++ DG + E+K Sbjct: 202 AQNAKEVYKITKCDGLMIGRASVGNPWIFYEIK 234 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 46/160 (28%), Gaps = 6/160 (3%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDI 75 VK N + +AK G D + + T D ++ + I Sbjct: 136 SVKFRLGFNEKY---PEKMAKICESLGVDFVSVHGRTRKQLYSGKADYESIASAKASVKI 192 Query: 76 PFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P G I + ++A ++ D + I ++ +P + + V + Sbjct: 193 PVIANGDI-NAQNAKEVYKITKCDGLMIGRASVGNPWIFYEIKSGKSVDEKLKKEIILTH 251 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + H R + ++ + G I Sbjct: 252 FDEMIKHYKDQGVSIFRKHLHEYSKGHKDASAFRDGVNRI 291 >UniRef50_UPI00016C52C4 dihydrouridine synthase DuS n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C52C4 Length = 326 Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 24/178 (13%), Positives = 46/178 (25%), Gaps = 2/178 (1%) Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 + + + E A + GA + +N A + + Sbjct: 50 VQVQLLGGDSGRMAESAVRAHELGATAVDVNFGCPAPTVNRHDGGAALLRHPLRIREIVG 109 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLE 191 HV T + + GA I ++ + E Sbjct: 110 AIRAALPPHVPVSAKLRLGWD-TLDAIHENATMAAEGGAAWITIHGRTRVAGYAPPIHWE 168 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + +VRE +P++A+G T+E F + + A L Sbjct: 169 PIGRVRERLGIPVVANGDIWTVEDFKRCRDVTGCKHFMLGRGALADPRLARRVAAELG 226 Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 53/161 (32%), Gaps = 4/161 (2%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKS 64 I L K + A AE GA + + T + + Sbjct: 111 IRAALPPHVPVSAKLRLGWDTLDAIH--ENATMAAEGGAAWITIHGRTRVAGYAPPIHWE 168 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQ 123 + RV E + IP G I ++ED + G + ALADP L R+A G+ Sbjct: 169 PIGRVRERLGIPVVANGDIWTVEDFKRCRDVTGCKHFMLGRGALADPRLARRVAAELGLV 228 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 V D +D ++ +++ R + + Sbjct: 229 PPVEETDEPFDWAAQLRNLVEWSHRFDMLRSDKNVSRLKQW 269 >UniRef50_D1AWB1 Dihydrouridine synthase DuS n=12 Tax=Fusobacteriaceae RepID=D1AWB1_STRM9 Length = 305 Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 63/185 (34%), Gaps = 3/185 (1%) Query: 71 EVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 +I I ++ AAK + G +I++N + + + Sbjct: 52 RENNIVQIFGKDIYLMQKAAKYIESMGVKEINLNCGCPMKKIVNSGHGSALIKDPRKIEE 111 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-Y 188 E L+ + +K I+++ ++ +G Sbjct: 112 ILTALREVLDPKTALSLKIRVG-YDKPENYLEIAKIAEKLKCSNIIIHGRTREQKYSGEA 170 Query: 189 DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 D + +K+V++ ++ +I +G ++ +E R+ +VDG + A I ++K Sbjct: 171 DWKYIKEVKDNVNIKVIGNGDIFDAKNAIEKIRETNVDGIMLARGILGNPWLISQIKELF 230 Query: 249 ATQGV 253 + Sbjct: 231 EFGEI 235 Score = 79.0 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 10/195 (5%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVS 67 LD + +K + + + +AK + ++ + T D ++ Sbjct: 119 VLDPKTALSLKIRVGYDKP--ENYLEIAKIAEKLKCSNIIIHGRTREQKYSGEADWKYIK 176 Query: 68 RVAEVIDIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 V + ++I G I ++A KI D I + L +P LI+++ + F I Sbjct: 177 EVKDNVNIKVIGNGDIFDAKNAIEKIRETNVDGIMLARGILGNPWLISQIKELFEFGEIK 236 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + HV +Y D +G E ++ + Sbjct: 237 TIVRDIDRINMAIRHVKEYAIDNENVFFPDIRKYIIWYIENIKGIDE------TKNLINQ 290 Query: 187 GYDLEQLKKVREVCH 201 ++ +++ ++ E Sbjct: 291 SFEYDEIIELLEKIR 305 >UniRef50_UPI000180C543 PREDICTED: similar to dihydrouridine synthase 1-like n=2 Tax=Eumetazoa RepID=UPI000180C543 Length = 626 Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 10/187 (5%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLED---AAKILSFGADKISINSPALADPTLITRLADRF 120 V ++ D P V S E+ A+K++ + + +N Sbjct: 61 KVVQDLSSTEDHPLIVQFCSNSAENFLEASKLVEGLCEGVDLNLGCPQHIAKRGHFGAYL 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 T K H+ + R +T+ + Q ++ G I ++ Sbjct: 121 QED----WDLIIEIISTTKQHIGIGVTAKIRVFNEIDKTVKYAQMLETAGCDIITVHGRT 176 Query: 181 QDGVR---NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 ++ + +K V++ +P+ A+G + VDG + A Sbjct: 177 REQKGPNTGLASWDHIKAVKDNVDIPVFANGNIQYYCDIMRCMETTGVDGVMVAEGNLTN 236 Query: 238 IINIGEL 244 + +L Sbjct: 237 PMIFQDL 243 Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 44/164 (26%), Gaps = 7/164 (4%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAE 71 G K F I V A+ G D + + T G + + V + Sbjct: 141 GVTAKIRVFNE---IDKTVKYAQMLETAGCDIITVHGRTREQKGPNTGLASWDHIKAVKD 197 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 +DIP G I+ D + + G D + + L +P + L+ V +V Sbjct: 198 NVDIPVFANGNIQYYCDIMRCMETTGVDGVMVAEGNLTNPMIFQDLSTPCNVYDVVEEYF 257 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + R + + Sbjct: 258 ALVAQYPCPLSSARSHMFRIWARTLLIHKDMRERIGSANNIDML 301 >UniRef50_C6XJQ7 Dihydrouridine synthase DuS n=2 Tax=Hyphomonadaceae RepID=C6XJQ7_HIRBI Length = 337 Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 68/223 (30%), Gaps = 9/223 (4%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRV-AEVIDIPFCVAGGIKSL----EDAAK 91 ++ + GA ++ I S V R+ PF V + E A Sbjct: 28 RQASRFGAPVVITEMIAGSELATGRQ-DMVWRITKPENTFPFVVQLAGRDPKWMYEAARI 86 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 S GAD I IN + + A + Sbjct: 87 SASAGADIIDINMGCPSRQVTGGQSGAALMRDLD--LARELIIAAREGGGLPVSVKMRLG 144 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 + ++ I ++ + G D ++K+V+ ++PLI +G Sbjct: 145 WDDDTLNAPALAKICEEEHVKLITVHGRTRCQFYTGKADWNKVKEVKLASNLPLIVNGDI 204 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + + +A + DG + + +G++ + LA + Sbjct: 205 DSSKTAKQAILLSQADGVMIGRAALGRPWLLGKIASDLANRPY 247 Score = 77.8 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 3/118 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVI 73 VK + + + LAK EE + + T D + V V Sbjct: 136 PVSVKMRLGWDDDTLNAPA-LAKICEEEHVKLITVHGRTRCQFYTGKADWNKVKEVKLAS 194 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 ++P V G I S + A + + AD + I AL P L+ ++A + + Sbjct: 195 NLPLIVNGDIDSSKTAKQAILLSQADGVMIGRAALGRPWLLGKIASDLANRPYIEPTW 252 >UniRef50_A0M6M9 TRNA-dihydrouridine synthase n=16 Tax=Bacteroidetes RepID=A0M6M9_GRAFK Length = 330 Score = 88.6 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 73/233 (31%), Gaps = 10/233 (4%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW----VSRVAEVIDIPFCVAGG 82 E + D A E+GAD + I++ R KS + + I A Sbjct: 20 EDVSDPPFRA-LCKEQGADVVYTEFISSEGLIREAAKSTMKLDIYEKERPVGIQIFGANL 78 Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 L+ + G D I IN + + + +A + Sbjct: 79 ESMLQSVEIVEKSGPDIIDINFGCPVKKVVSKGAGAGILKDID--LMVSLTEAMVKNTSL 136 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC- 200 + ++ + +Q G I ++ + + G D + +V+ Sbjct: 137 PITVKTRLGWDHDSIKIVEVAERLQDVGCKAISIHGRTRAQMYKGEADWAPIAEVKNNPR 196 Query: 201 -HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 H+P+ +G + E +E + +DGA+ E+K Y T Sbjct: 197 MHIPVFGNGDVDSPEKAMEMRDNFGLDGAMIGRASIGYPWFFREVKHYFETGK 249 Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 47/156 (30%), Gaps = 5/156 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEV- 72 VK +H IV +A+R + G + + T + + D + ++ V Sbjct: 137 PITVKTRLGWDH-DSIKIVEVAERLQDVGCKAISIHGRTRAQMYKGEADWAPIAEVKNNP 195 Query: 73 -IDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + IP G + S E A ++ G D I ++ P + F + Sbjct: 196 RMHIPVFGNGDVDSPEKAMEMRDNFGLDGAMIGRASIGYPWFFREVKHYFETGKHLAPPT 255 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + + H+ + + Sbjct: 256 LEERVDAARRHLQMAIDWKGERLGVFETRRHYTNYF 291 >UniRef50_B3PD21 Dihydrouridine synthase family protein n=4 Tax=Proteobacteria RepID=B3PD21_CELJU Length = 321 Score = 88.2 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 54/168 (32%), Gaps = 2/168 (1%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +A +++ +GA I +N A V + + Sbjct: 80 NAQELVRYGAKAIDLNFGCPAKTVNSHEGGACLLRTPDRVYSIIKAVRDAVPRAIPVSAK 139 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIA 206 + ++ Q V+ GA E+ ++ ++ + ++ +P+IA Sbjct: 140 IRLG-FEDRTSYMENAQAVEAAGADELTVHARSKADGYKPPAYWHYIADIKAALKIPVIA 198 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +G ++E +L + + ++KAYLA + Sbjct: 199 NGEIWSVEDYLRCREQSQCADVMLGRGLLSCPDLARQIKAYLAGEEYR 246 Score = 71.3 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 43/147 (29%), Gaps = 4/147 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPF 77 K + A+ GADEL + + + + +++ + + IP Sbjct: 139 KIRLGFEDRTS--YMENAQAVEAAGADELTVHARSKADGYKPPAYWHYIADIKAALKIPV 196 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I S+ED + + + L+ P L ++ + Sbjct: 197 IANGEIWSVEDYLRCREQSQCADVMLGRGLLSCPDLARQIKAYLAGEEYRPLTWGEVCQI 256 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWV 163 Y+ E+R + + Sbjct: 257 LFDYYRLTTPLYETRNCGNRVKQWLMY 283 >UniRef50_Q4UGK9 Putative uncharacterized protein n=2 Tax=Theileria RepID=Q4UGK9_THEAN Length = 359 Score = 88.2 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 23/208 (11%), Positives = 55/208 (26%), Gaps = 14/208 (6%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA 97 AD + A + + D P Sbjct: 44 LCRRYSADLAYTPMLHAKIFSENENYRNIHFHTSSDDKPLIAQFCGNDP----------- 92 Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 + S + + + G + E + + +++ + Sbjct: 93 SAFILASSYIKNDVSAIDINLGCPQGIAKKGRYGSFLLEYPQLITKGFASVDTKFMLFTR 152 Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY---DLEQLKKVREVCHVPLIASGGAGTME 214 L VQ Q G + ++ ++ + D + +K ++ ++P+IA+GG T E Sbjct: 153 GWLFSVQSCQANGCKALTVHGRHRSETKTRISECDWDSIKIIKSRVNIPVIANGGIETFE 212 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIG 242 D +++ + Sbjct: 213 DVKRCLDYTGADAVMSSEAILENPYLFS 240 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 4/80 (5%) Query: 36 AKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + G L + S D + + ++IP GGI++ ED + Sbjct: 158 VQSCQANGCKALTVHGRHRSETKTRISECDWDSIKIIKSRVNIPVIANGGIETFEDVKRC 217 Query: 93 LSF-GADKISINSPALADPT 111 L + GAD + + L +P Sbjct: 218 LDYTGADAVMSSEAILENPY 237 >UniRef50_C9LMP9 tRNA-dihydrouridine synthase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMP9_9FIRM Length = 330 Score = 88.2 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 56/221 (25%), Gaps = 7/221 (3%) Query: 38 RYAEEGADELVFYDITASS--DGRVVDKSWVSRVAEVIDIPFCVAGG--IKSLEDAAKIL 93 + GA ++A K + E + + G A + Sbjct: 31 IARKMGAALTTAEMVSAKGLYYHNEKTKDMLKIAEEEHPVSLQLFGSDPAVMALGAKVME 90 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GAD + IN + A T + Sbjct: 91 KAGADIVDINMGCPMQKVVKNGDGSALMKNVT--LAAEIISAVTAAVKIPVTIKMRLGWS 148 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 ++ + GA I ++ ++ G D ++KKV + +P+I +G G Sbjct: 149 RDTINAVELAMAAESAGAAAITVHGRTREDFYMGTADWREIKKVVDAVRIPVIGNGDVGD 208 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + G + YL T + Sbjct: 209 GPAAKALMEETGCAAVAIGRAAWGNPWVFGAVNTYLETGEI 249 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 5/170 (2%) Query: 2 LAKRIIPCLD--VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDG 58 LA II + V+ +K + V LA GA + + T Sbjct: 123 LAAEIISAVTAAVKIPVTIKMRLGW-SRDTINAVELAMAAESAGAAAITVHGRTREDFYM 181 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLA 117 D + +V + + IP G + A ++ G ++I A +P + + Sbjct: 182 GTADWREIKKVVDAVRIPVIGNGDVGDGPAAKALMEETGCAAVAIGRAAWGNPWVFGAVN 241 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 I+ G + H++ ++ + + Sbjct: 242 TYLETGEILPGPSWEERLAMARKHLHGLCVEKGERIAVREMRAHASRYFH 291 >UniRef50_Q9JUP6 tRNA-dihydrouridine synthase C n=23 Tax=Neisseriaceae RepID=DUSC_NEIMA Length = 333 Score = 87.9 bits (216), Expect = 3e-16, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 70/214 (32%), Gaps = 12/214 (5%) Query: 52 ITASSDGRVVDKSWVSRVAEV--------IDIPFCVAGGIKSLEDAAKILSFGADKISIN 103 IT + R +V +A + + +A + + FGADKI +N Sbjct: 48 ITHTVHSRATWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGADKIDLN 107 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 A + + ++ E H+ + L+ Sbjct: 108 FGCPAPTVNRHKGGAILLKEPELIFHIVKTLRERLPAHIPLTAKMRLG-YEDKSPALECA 166 Query: 164 QEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 + + GA + ++ + E ++K+R+ +P+ A+G +++ ++ Sbjct: 167 CAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVDIPVTANGDVFSLQDYIGIKTI 226 Query: 223 ADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + + + + ++K Y G ++ Sbjct: 227 SGCNSVMLGRGAVIRPDLARQIKQY--ENGGPVK 258 Score = 64.0 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 43/149 (28%), Gaps = 4/149 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + + A AE GA L + T + W+ ++ + +DIP Sbjct: 151 KMRLGYEDKSP--ALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVDIPV 208 Query: 78 CVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + SL+D G + + + A+ P L ++ + Sbjct: 209 TANGDVFSLQDYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKW 268 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQE 165 ++ T + + Sbjct: 269 IRQFFELCLTKEANNKYPIARLKQWLGMM 297 >UniRef50_A5EVV4 Dihydrouridine synthase n=2 Tax=Cardiobacteriaceae RepID=A5EVV4_DICNV Length = 318 Score = 87.9 bits (216), Expect = 3e-16, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 48/182 (26%), Gaps = 4/182 (2%) Query: 70 AEVIDIPFCVAGGIK-SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 A I V G E A + + G D I IN A V Sbjct: 66 ARFPKIVQLVGGDPYLMAETAQVMQALGCDVIDINMGCPAKKVGKQNAGSALLSDLPQVE 125 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 T + + + G + ++ + NG Sbjct: 126 K--ILAQVTRVVSIPVTLKTRLGFNEQTMTIETVAKIAENTGVAALTVHGRTRAQRFNGT 183 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +++ +V+ +P+I +G T + + DG + + ++ Sbjct: 184 AHYDEIGRVKAQTSLPIIVNGDITTTAQAQDLIQQFGFDGVMIGRAACGNPWLLAHMRCA 243 Query: 248 LA 249 L Sbjct: 244 LD 245 Score = 77.5 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 43/156 (27%), Gaps = 3/156 (1%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K N + + I +AK G L + T + + RV +P Sbjct: 142 KTRLGFNEQTMT-IETVAKIAENTGVAALTVHGRTRAQRFNGTAHYDEIGRVKAQTSLPI 200 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 V G I + A ++ G D + I A +P L+ + + I Sbjct: 201 IVNGDITTTAQAQDLIQQFGFDGVMIGRAACGNPWLLAHMRCALDCDFALPAISRRAVIS 260 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 ++Q + + + Sbjct: 261 EHISALHQLYQRQGLLIARKHLHWYLAPMPRYDFWR 296 >UniRef50_Q256J2 Dehydrogenases n=13 Tax=Chlamydiaceae RepID=Q256J2_CHLFF Length = 339 Score = 87.9 bits (216), Expect = 3e-16, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 58/202 (28%), Gaps = 7/202 (3%) Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLEDAAKILS-FGADKISINSPALAD 109 I + + I + G + +AAK+L G D I +N D Sbjct: 49 IEGLHYSPSRTLKLLEYSESMRPIGGQLCGSKPEMAGEAAKVLEGLGFDLIDLNCGCPTD 108 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 I + G + S + V+ +++ Sbjct: 109 RITKDGSGSGLLKTPE--LIGKVLEKIIGSVSIPVTVKIRSGWDGNNINVEETVRIIKEA 166 Query: 170 GAGEIVLNMMNQDGVRNGY-DLEQLKKVREVC--HVPLIASGGAGTMEHFLEAFRDADVD 226 GA + ++ + G +LE + + + P+ +G + E D Sbjct: 167 GASAVFVHGRTRAQGYVGPSNLEYIARAKAAAGKDFPVFGNGDVFSPEAAKLMLDSTGCD 226 Query: 227 GALAASVFHKQIINIGELKAYL 248 G L A +++ YL Sbjct: 227 GVLVARGTMGAPWIARQIEDYL 248 Score = 84.8 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 50/166 (30%), Gaps = 7/166 (4%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-RVVDK 63 +II + + VK + I ++ + E GA + + T + + Sbjct: 132 KIIGSVSI--PVTVKIRSGWDGNNI-NVEETVRIIKEAGASAVFVHGRTRAQGYVGPSNL 188 Query: 64 SWVSRVAEVI--DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRF 120 +++R D P G + S E A +L G D + + + P + ++ D Sbjct: 189 EYIARAKAAAGKDFPVFGNGDVFSPEAAKLMLDSTGCDGVLVARGTMGAPWIARQIEDYL 248 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + ++ +S + + Sbjct: 249 TTGTYQKMPFSTRKQAFLQHLHWVEEYYQSEAKFLCETRKLCGHYL 294 >UniRef50_B9NQS6 NifR3 family protein n=3 Tax=Rhodobacteraceae RepID=B9NQS6_9RHOB Length = 364 Score = 87.9 bits (216), Expect = 3e-16, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 46/168 (27%), Gaps = 3/168 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 E A ++ GA I IN A +A + Sbjct: 117 WMAEAARQVADRGARVIDINMGCPAKKVTNGYSGSALLKTPDHALT--LIEAVVAAVDIP 174 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 + D + Q G + ++ + G D + + V+E V Sbjct: 175 VTLKTRLGWDDSLLNAPDVARRAQDAGIQMVTIHGRTRCQFYKGRADWQAIGAVKEAVSV 234 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 P+IA+G A + DG + + + ++ L Sbjct: 235 PVIANGDITGPGAARTALDQSGADGVMVGRGAQGRPWLLAQICHDLYG 282 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 48/170 (28%), Gaps = 5/170 (2%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKS 64 ++ +D+ +K + ++ +A+R + G + + T + D Sbjct: 167 VVAAVDI--PVTLKTRLGWDDSLLNAP-DVARRAQDAGIQMVTIHGRTRCQFYKGRADWQ 223 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 + V E + +P G I A L GAD + + A P L+ ++ Sbjct: 224 AIGAVKEAVSVPVIANGDITGPGAARTALDQSGADGVMVGRGAQGRPWLLAQICHDLYGI 283 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + + H + + G Sbjct: 284 APPDIPTGSALIDMVRGHYQAMLAFYGTDLGLRVARKHLGWYMDDAGTPA 333 >UniRef50_UPI0001792282 PREDICTED: similar to tRNA-dihydrouridine synthase n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792282 Length = 578 Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 66/216 (30%), Gaps = 6/216 (2%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLEDAAKIL 93 + E GAD ++ G + + R V G L +A++L Sbjct: 248 RICKEFGADITCSEMVLSSSLLQGHNQEWALTKRHETEDIFGIQVCGNNPYMLAKSAQVL 307 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 D ++ I + G+ ++ + V S Sbjct: 308 QENVDMDFLDLNLGCPLDQIYKQGAGSGLLLRSKKLEVCLKSMRTVLDVPLTVKTRSGVN 367 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVRE-VCHVPLIASGGAG 211 Q D + + G I ++ ++D D + + + V + +SG Sbjct: 368 KDQNVAHDLIPMFKDSGVSLITVHGRSRDQRYTKMADWNYVNECAKLASPVQVFSSGDIM 427 Query: 212 TMEHFLE-AFRDADVDGALAASVFHKQIINIGELKA 246 + E +++ + D+ GA+ + ELK Sbjct: 428 SYEDYVDSKLQFPDITGAMIGRGALIKPWIFKELKE 463 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 23/170 (13%), Positives = 45/170 (26%), Gaps = 7/170 (4%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVS 67 LDV VK N + L + + G + + + ++ D ++V+ Sbjct: 353 VLDV--PLTVKTRSGVN-KDQNVAHDLIPMFKDSGVSLITVHGRSRDQRYTKMADWNYVN 409 Query: 68 RVAE-VIDIPFCVAGGIKSLEDAAKILSFGAD--KISINSPALADPTLITRLADRFGVQC 124 A+ + +G I S ED D I AL P + L + Sbjct: 410 ECAKLASPVQVFSSGDIMSYEDYVDSKLQFPDITGAMIGRGALIKPWIFKELKENCHWDI 469 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + ++ + G + Sbjct: 470 SSNERLEILKKYVKYGLEHWGSDTRGVETTRKFLLEWLSFCYRYIPVGIL 519 >UniRef50_D1VTQ2 Probable tRNA-dihydrouridine synthase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VTQ2_9FIRM Length = 310 Score = 87.5 bits (215), Expect = 4e-16, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 11/212 (5%) Query: 44 ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISIN 103 A L F D + + + + +E +K D Sbjct: 36 ARALCFNDR--------KTLELLKKFPGEKNTGVQIFA--SDVESISKASYLLNDFDFSY 85 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 + + G I + + + N+ ++R +LD + Sbjct: 86 IDINMGCPAPKIVKNGCGSALIKNPNLVYELVKGAVKNSNKKISIKTRKSFDNTLSLDII 145 Query: 164 QEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 + Q GA + ++ +++ D + L K+++ +PLI +G T+E L + Sbjct: 146 RAAQDAGAFAVTVHPRSREEYYKNKSDWQYLIKIKKFLTIPLIGNGDILTVEDALYKIKK 205 Query: 223 ADVDGALAASVFHKQIINIGELKAYLATQGVE 254 DVDG + + ++K L + E Sbjct: 206 YDVDGIAIGRGAIENPLIFSQIKKALKGEKYE 237 Score = 64.4 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 48/121 (39%), Gaps = 5/121 (4%) Query: 14 DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEV 72 +K + ++ + + + + + GA + + + + D ++ ++ + Sbjct: 126 KKISIKTRKSFDNTLS---LDIIRAAQDAGAFAVTVHPRSREEYYKNKSDWQYLIKIKKF 182 Query: 73 IDIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + IP G I ++EDA KI + D I+I A+ +P + +++ + Sbjct: 183 LTIPLIGNGDILTVEDALYKIKKYDVDGIAIGRGAIENPLIFSQIKKALKGEKYEELNFN 242 Query: 132 W 132 Sbjct: 243 Q 243 >UniRef50_Q1PLA2 Putative cyclase hisF n=1 Tax=uncultured Prochlorococcus marinus clone ASNC1363 RepID=Q1PLA2_PROMA Length = 268 Score = 87.5 bits (215), Expect = 4e-16, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 112/259 (43%), Gaps = 14/259 (5%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRY----AEEGADELVFYDITASSDG 58 KRII L + V F + IGD+ L K Y DEL+ D+T Sbjct: 4 KKRIIFTLLYNSNRFVLSRNF-RLQTIGDLDWLKKNYNFDNVAYHIDELLILDVTRGRKD 62 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 V++++E I +P + GGI SLE A GADK+SINS L D +L+T++ Sbjct: 63 SEEFCKVVTQISENIFVPLTIGGGINSLEKAKLFFKSGADKVSINSS-LLDESLVTQIVK 121 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 +G QC+V ID E + N T S + GEI +N Sbjct: 122 NYGKQCLVGSIDVLKKNEEYYVYSNNGTKLVSSLNKFFENKEFFNN------IGEIYINS 175 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 +NQDG NG D+ + V VP I SGG G + +AF+ ++ A + + Sbjct: 176 INQDGTGNGLDISLAEFVSAKSEVPFIISGGVGKITDIKDAFKYDFINAVSTAHLLNFIG 235 Query: 239 INIGELKAYLATQGVEIRI 257 ++ + + G +R+ Sbjct: 236 DSLKKTRLICDECG--VRL 252 >UniRef50_Q7QCT0 AGAP002791-PA (Fragment) n=3 Tax=Culicidae RepID=Q7QCT0_ANOGA Length = 396 Score = 87.5 bits (215), Expect = 4e-16, Method: Composition-based stats. Identities = 16/169 (9%), Positives = 52/169 (30%), Gaps = 1/169 (0%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I A A++++ D + +N + ++ Sbjct: 81 IAQFAANNTIDFLSASEMVYPYVDGVDLNCGCPQRWAMAEGYGSALLKTPELIADMLGTV 140 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ-DGVRNGYDLEQL 193 + + T+D ++++ G + ++ + + + L Sbjct: 141 RRNMPSTFSVSVKVRLLSSTDHKRTIDMCRQLEATGITFLTVHGRTAPEMTKVPVHKDAL 200 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +++++ +P++A+G T++ + + DG + A Sbjct: 201 QEIKQSIGIPMVANGDIFTLDDAEQMYLQTKCDGVMTARGILSNPALFA 249 Score = 74.0 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 3/137 (2%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVID 74 VK + + + ++ G L + TA + V K + + + I Sbjct: 150 VSVKVRL-LSSTDHKRTIDMCRQLEATGITFLTVHGRTAPEMTKVPVHKDALQEIKQSIG 208 Query: 75 IPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G I +L+DA ++ L D + L++P L + Sbjct: 209 IPMVANGDIFTLDDAEQMYLQTKCDGVMTARGILSNPALFAGHSSTPVECVKRWLNICQQ 268 Query: 134 DAETGKYHVNQYTGDES 150 Y + Sbjct: 269 ADTDITYQCMHHHFSFM 285 >UniRef50_Q3ZZ14 Indole-3-glycerol phosphate synthase n=5 Tax=Dehalococcoides RepID=TRPC_DEHSC Length = 259 Score = 87.5 bits (215), Expect = 4e-16, Method: Composition-based stats. Identities = 35/256 (13%), Positives = 72/256 (28%), Gaps = 45/256 (17%) Query: 7 IPCLDV---RDGQVVKGV---------QFRNHEIIGDIVPLAKRYAEEGADELVFYDITA 54 P +D+ G+ V+ + + D V +A YA GA + Sbjct: 35 YPPIDMAMKLKGRQVRLIAEVKKASPSKGIIRSDF-DPVDIAGIYARNGASAISVLTEEH 93 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 G + + + +P I + +GAD I + L+ L Sbjct: 94 HFMGSLDNLKKIRESGVASKLPLLRKDFIHDPYQVYESRLYGADAILLIVAMLSPERLQE 153 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 L+ + + + T ++ + A I Sbjct: 154 LLSLSHKL---------------------------GMKCLVEVHTRSELEIALESNARII 186 Query: 175 VLNMMNQDGVRNGYDLEQLKKVREV--CHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 LN + + DL +++R + +++ G T + VD L Sbjct: 187 GLNNRDLHTFK--IDLTVTERLRPLIPPECIVVSESGIQTRADISR-LEELGVDAVLVGE 243 Query: 233 VFHKQIINIGELKAYL 248 + +++ L Sbjct: 244 ALTASVDIAAKMRELL 259 >UniRef50_D2R6Z1 TIM-barrel protein, nifR3 family n=3 Tax=Planctomycetaceae RepID=D2R6Z1_9PLAN Length = 345 Score = 87.5 bits (215), Expect = 4e-16, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 62/230 (26%), Gaps = 9/230 (3%) Query: 34 PLAKRYAEEGADELVFYDITAS---SDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLED 88 + + + G + + + + V E +L Sbjct: 30 QMVREFGGAGLQATEMVNASGFAWLHEHEAEHPDRLWGVKEEARPLAVQMWDNDPATLAK 89 Query: 89 AAKIL--SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + L + IN + + ++ Sbjct: 90 VGERLANELHVSVVDINFGCPVKDVTEKAHSGSYLLKFPDRIAQIVERVVKACAPTPVTA 149 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-VPL 204 ++ + V+ GA + ++ G D ++ +++ +PL Sbjct: 150 KIRLGCSRDAINAIEIAKVVESAGAAALTVHGRTAADFFRGTADWNRIAEIKPHLKKIPL 209 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 I +G + E +EAFR VDG + A + + A L + V Sbjct: 210 IGNGDLDSPEKVIEAFRRYGVDGVMIARASMGRPWLFRQAAAALRGEPVP 259 Score = 73.2 bits (178), Expect = 8e-12, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 4/151 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI-DIP 76 K + + +AK GA L + TA+ R D + ++ + + IP Sbjct: 150 KIRLGC-SRDAINAIEIAKVVESAGAAALTVHGRTAADFFRGTADWNRIAEIKPHLKKIP 208 Query: 77 FCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + S E +G D + I ++ P L + A + + Sbjct: 209 LIGNGDLDSPEKVIEAFRRYGVDGVMIARASMGRPWLFRQAAAALRGEPVPPDPTAEEQR 268 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 T H + T Sbjct: 269 LTMLRHYELTCARFGEQKGTLLMRKFACNYA 299 >UniRef50_B9JF02 tRNA-dihydrouridine synthase protein n=12 Tax=Alphaproteobacteria RepID=B9JF02_AGRRK Length = 342 Score = 87.1 bits (214), Expect = 5e-16, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 45/157 (28%), Gaps = 3/157 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 E A GAD I IN A + +A V Sbjct: 94 WMAEAAKIAADNGADIIDINMGCPAKKVIGGYSGSALMRDPDHALG--LIEATVKAVDVP 151 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 + ++ G + ++ + G D + ++ VR+V + Sbjct: 152 VTLKMRLGWDENSINAPHIARRAEEAGIQLVTIHGRTRMQFYEGRADWDAIRAVRDVISI 211 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 PL+A+G T E E R + D + + Sbjct: 212 PLVANGDVDTPEDASEILRRSGADAVMVGRGCQGRPW 248 Score = 80.9 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 5/106 (4%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVS 67 +DV +K + I +A+R E G + + T D + Sbjct: 147 AVDV--PVTLKMRLGWDENSINAP-HIARRAEEAGIQLVTIHGRTRMQFYEGRADWDAIR 203 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTL 112 V +VI IP G + + EDA++IL GAD + + P Sbjct: 204 AVRDVISIPLVANGDVDTPEDASEILRRSGADAVMVGRGCQGRPWH 249 >UniRef50_B7G230 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G230_PHATR Length = 545 Score = 87.1 bits (214), Expect = 5e-16, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 68/225 (30%), Gaps = 17/225 (7%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL- 93 + + GAD T G+ + + + R E +A G + L Sbjct: 204 RIMKKFGADITCGEMAVATNLLSGQSSEWALLKRHPEEDIFGVQIAAGYPDVFARTCELI 263 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 D + +N D ++ + + + Sbjct: 264 ENEMNVDFVDLNLGCPLDIVCNKGSGAALMMRDKRLRS--SVEGILETLTCPISIKMRTG 321 Query: 152 TRVTQWETLDWVQEVQKRGAGEI---VLNMMNQDGVR-NGYDLEQLKKVREV-----CHV 202 +T+ + VQ++Q G I +++ ++ D + + V + + Sbjct: 322 WEMTKPFAHNLVQKIQSWGLDGISAVMIHGRSRLQRYAKEADWDYISMVAKSQDMSLTTI 381 Query: 203 PLIASGGAGTMEHFLEAFRDADVDG-ALAASVFHKQIINIGELKA 246 P+I +G + + F E V+ A+ A + E+K Sbjct: 382 PVIGNGDIFSYQDFEEKIAREGVNSCAMLARGALIKPWLPTEIKE 426 >UniRef50_C1ZB06 tRNA-dihydrouridine synthase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZB06_PLALI Length = 381 Score = 87.1 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 19/174 (10%), Positives = 42/174 (24%), Gaps = 5/174 (2%) Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 + AA+ L G + + +N R G Sbjct: 110 QLFGADPTHVATAARWLEDLGYEGVDLNMGCPMAKVNSQGGGARLMCDPT--GATRLVAL 167 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 + ++ ++ GA I ++ + +G E + Sbjct: 168 VVASVSIPVTVKMRLGWDAQSLSAPLLARQFEEVGAAAITIHGRTRAQGFSGKVSREGIA 227 Query: 195 KVREVC-HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +P+I +G T+E + R+ +L + Sbjct: 228 ATVAAVQSIPVIGNGDVRTVEDAISMRRETGCAAVAIGRGAMLDPWIFRKLHDF 281 Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 62/190 (32%), Gaps = 7/190 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + + + + LA+++ E GA + + T + V + ++ + Sbjct: 175 PVTVKMRLGWDAQSLSAPL-LARQFEEVGAAAITIHGRTRAQGFSGKVSREGIAATVAAV 233 Query: 74 -DIPFCVAGGIKSLEDAA-KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 IP G ++++EDA G ++I A+ DP + +L D Sbjct: 234 QSIPVIGNGDVRTVEDAISMRRETGCAAVAIGRGAMLDPWIFRKLHD--FEMTGQYAEPG 291 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 + + D + T+ + G + L + E Sbjct: 292 PEEQIQFLVTHFREMVDLFGEQATRLFRKFAGWYGARLGIPQ-DLEDRLRRVESLSEFEE 350 Query: 192 QLKKVREVCH 201 + ++RE Sbjct: 351 IVAEIRERHG 360 >UniRef50_Q8TVJ8 Indole-3-glycerol phosphate synthase n=1 Tax=Methanopyrus kandleri RepID=TRPC_METKA Length = 254 Score = 87.1 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 67/228 (29%), Gaps = 35/228 (15%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 D+ A+ Y GA + DGR +V V E +D+P I Sbjct: 55 RDVDAEDVAERARAYERGGAAGISVLTEPEFFDGRP---EYVEVVREAVDVPVLRKDFII 111 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + +GAD + I + A+ + Sbjct: 112 DPVQVEESAHYGADAVLIIAAAVGRE----------------------------APELID 143 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL--EQLKKVREVCHV 202 + + + + + ++ + + + +N + + + E +V+++ + Sbjct: 144 LAHEHGMEVLLEIDRWEHLELLSECDPDVVGVNNRDLRTLEVDLNRTLELGPEVKDLTNA 203 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 PL+A G E + D L + + ++ + Sbjct: 204 PLVAESGVSGPEDVVLLGEV--ADAVLVGTYLMRAPDPSEAVRKLVEA 249 >UniRef50_Q12U52 tRNA-dihydrouridine synthase n=2 Tax=Archaea RepID=Q12U52_METBU Length = 318 Score = 87.1 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 37/116 (31%), Gaps = 1/116 (0%) Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVR 197 V+ + R ++ TLD ++ G I ++ + +G D K ++ Sbjct: 130 CEGVDTPVTAKIRVLESRAATLDMAHRLEDAGVCAITVHGRTCEQGYSGTADHSYAKLIK 189 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 E +P+I +G + DG + + YL V Sbjct: 190 EELSIPVIVNGDIRDGVSAEKVLEYTGCDGLMIGRAAMGDPHVFHRISRYLDDGEV 245 Score = 77.1 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 2/103 (1%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVA 80 + R E + +A R + G + + T D S+ + E + IP V Sbjct: 140 KIRVLESRAATLDMAHRLEDAGVCAITVHGRTCEQGYSGTADHSYAKLIKEELSIPVIVN 199 Query: 81 GGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGV 122 G I+ A K+L + G D + I A+ DP + R++ Sbjct: 200 GDIRDGVSAEKVLEYTGCDGLMIGRAAMGDPHVFHRISRYLDD 242 >UniRef50_B0SC53 tRNA-dihydrouridine synthase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SC53_LEPBA Length = 316 Score = 87.1 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 61/180 (33%), Gaps = 2/180 (1%) Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 + I + + ++A + S GA I IN A R + ++ Sbjct: 65 VKIQILGSDPNRMADNAHLVASLGAYGIDINFGCPAPTVNRNRGGAALLKEPNLMYSIVK 124 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LE 191 ++ + LD + +++ GA EIV++ + E Sbjct: 125 AVRNVVPENIPVTAKMRLG-YESTELALDCAKALEEGGAKEIVVHARTKTDGYKPPAYWE 183 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + K++ + + +IA+G T++ ++ + + D + +K L + Sbjct: 184 WIAKIKSILKINVIANGEIWTVQDAIQCQKISGCDDIMIGRGAVTNPSIALLIKKKLEER 243 Score = 70.5 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 67/190 (35%), Gaps = 23/190 (12%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPF 77 K + + AK E GA E+V + T + + W++++ ++ I Sbjct: 139 KMRLGYESTEL--ALDCAKALEEGGAKEIVVHARTKTDGYKPPAYWEWIAKIKSILKINV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I +++DA + G D I I A+ +P++ + + + Sbjct: 197 IANGEIWTVQDAIQCQKISGCDDIMIGRGAVTNPSIALLIKKKLEER------------- 243 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV 196 + + V+ V + G + L+ ++++ D +++K++ Sbjct: 244 ------MSWQKTKEVLSSYWLSMEPDVEAVSRVGRIKQWLHYLSREYEEAQIDFQKIKRI 297 Query: 197 REVCHVPLIA 206 LI Sbjct: 298 SNPKDFELIY 307 >UniRef50_C5CI99 Dihydrouridine synthase DuS n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI99_KOSOT Length = 314 Score = 87.1 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 69/220 (31%), Gaps = 11/220 (5%) Query: 41 EEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADK 99 E GAD + ++ G + + ++ + G I L AAK + A Sbjct: 25 EWGADFVFSEMLSVE--GVLRNDRTTQKIIPETPCRIQLFGNDIARLAMAAKAVLDKATW 82 Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 IN+ + + + V + R + E Sbjct: 83 FDINAGCPVKKVVKRGAGAALLREPEKLNAMIQTLKGISDLPV----SVKIRLGWDKNEV 138 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC---HVPLIASGGAGTMEH 215 + V+ + + I+++ +G D E + KV ++C + + SG + E Sbjct: 139 VKIVERLVESRPFAIMVHGRTVVQGYSGVADWESIGKVVKICKPHGIKVYGSGDVFSPEK 198 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +EAF VDG L A + K + Sbjct: 199 IVEAFEKYGVDGVLVARGAIGNPWIFSQYKELKQKGSYTV 238 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 39/109 (35%), Gaps = 8/109 (7%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + ++V + +R E ++ + T D + +V ++ Sbjct: 124 PVSVKIRLGWDKN---EVVKIVERLVESRPFAIMVHGRTVVQGYSGVADWESIGKVVKIC 180 Query: 74 DIPFC---VAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 +G + S E + +G D + + A+ +P + ++ + Sbjct: 181 KPHGIKVYGSGDVFSPEKIVEAFEKYGVDGVLVARGAIGNPWIFSQYKE 229 >UniRef50_B1I3Z7 Indole-3-glycerol-phosphate synthase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I3Z7_DESAP Length = 275 Score = 87.1 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 68/237 (28%), Gaps = 39/237 (16%) Query: 18 VKGVQ---FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVID 74 VKG D V +A Y GA + GR ++S + + Sbjct: 54 VKGRSPSAGVI-RAAFDPVEIACIYEGAGAAAVSVLTDHTYFGGRP---EYLSEIRRSVK 109 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 +P I S + GAD + + + L D Sbjct: 110 LPLLRKDFIISEHQVYESRVLGADAVLLIAAVLDD------------------------- 144 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + + T + + +L ++ GA + +N + R DL+ + Sbjct: 145 --HELKGLMELTAALGMESLVEVHSLAELERATAAGASLVGINNRDLGTFRT--DLKHTR 200 Query: 195 KVREV--CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 ++ V ++ G T + L A VD L + ++ L Sbjct: 201 ELAVHLPPEVTTVSESGIRTRDDVL-ALEAWGVDAVLVGETLMRADDIDARVRELLG 256 >UniRef50_B1LWM8 TIM-barrel protein, nifR3 family n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LWM8_METRJ Length = 341 Score = 87.1 bits (214), Expect = 6e-16, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 61/220 (27%), Gaps = 6/220 (2%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK---SLEDAAKIL 93 + GAD ++ + A R ++ + +D+ G + E A Sbjct: 41 RIARRCGADAVISEMVAAREFTRGSGEATLRAEGSGVDLHVVQLAGCEAGPMAEAARLAE 100 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + GAD I +N A + G + Sbjct: 101 AGGADVIDVNMGCPAKIVTGIASGSALMRDLDHAER--LLASVRGAVSIPVTVKMRLGWD 158 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 D ++ G + ++ + G D ++ V +P+IA+G Sbjct: 159 DASRNAADLAARAERLGLNAVTVHGRTRQQFYKGRADWAAIRAVVAAVSIPVIANGDVTD 218 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + G + + +G++ A L + Sbjct: 219 FASARACLDASGAAGVMIGRAATGRPWLVGQVAAALTGRP 258 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 3/112 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + + LA R G + + + T + D + + V + Sbjct: 148 PVTVKMRLGWDDA-SRNAADLAARAERLGLNAVTVHGRTRQQFYKGRADWAAIRAVVAAV 206 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQC 124 IP G + A L GA + I A P L+ ++A + Sbjct: 207 SIPVIANGDVTDFASARACLDASGAAGVMIGRAATGRPWLVGQVAAALTGRP 258 >UniRef50_Q7U923 Putative imidazole glycerol phosphate synthase subunit hisF2 n=1 Tax=Synechococcus sp. WH 8102 RepID=HIS62_SYNPX Length = 269 Score = 86.7 bits (213), Expect = 6e-16, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 11/235 (4%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYA----EEGADELVFYDITASS 56 M KRII L DG F+ IGD L + Y DEL+ DI+ S Sbjct: 1 MSKKRIIFVLLYCDGFFCLSRNFKLQR-IGDFRWLQRNYNFNYSATFIDELIILDISRKS 59 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + ++E I +P GGI+S EDA + GADK+ +N+ + P + ++ Sbjct: 60 RDINKFATLLYNLSENIFVPITAGGGIRSFEDAKVLFENGADKVCLNTSLIQCPHVSEKI 119 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + +G Q +V ID +D ++ Q+ + + + EI+L Sbjct: 120 SSVYGQQSLVASIDFKHDHGD------FKFFIDNGLIEVQYNIQELISFLDPLPFCEILL 173 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +++DG G+DL R+ P+I GGAG +H +E D A Sbjct: 174 QSVDRDGTGTGFDLTLANTFRDQLSKPIILLGGAGHSDHLVEGLLHQSTDAVATA 228 >UniRef50_C2KNM7 Possible tRNA-dihydrouridine synthase n=4 Tax=Mobiluncus RepID=C2KNM7_9ACTO Length = 471 Score = 86.3 bits (212), Expect = 9e-16, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 56/220 (25%), Gaps = 13/220 (5%) Query: 49 FYDITASSDGRVVDKSWVSR--VAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSP 105 A G V + V I G A +++ G AD I +N Sbjct: 124 MVTAKALRMGSERSWVMVKSGPLQAVKSIQLYGVVGEDLAWAAGELVRRGLADHIDLNFG 183 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY---------HVNQYTGDESRTRVTQ 156 + G + V S Sbjct: 184 CPVPKVTRKGGGSALPWKTAYFGEVVAAVVAATRVASEDSGRSFPVPVTVKIRSGIDAEH 243 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEH 215 LD + + G + L+ G+ E + + EV +P++ +G Sbjct: 244 RIFLDVARVAEDNGVAAVTLHARTTSEYYGGHSHWEDIAALVEVLDIPVLGNGDVFCAAD 303 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 LE FR+ G + E+ A L V + Sbjct: 304 ALEMFRETGCAGVEIGRAVQGRPWIFREITAALWGLPVPV 343 Score = 70.5 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 56/214 (26%), Gaps = 26/214 (12%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + E + +A+ + G + + T S ++ + EV+ Sbjct: 230 PVTVKIRSGIDAEHRI-FLDVARVAEDNGVAAVTLHARTTSEYYGGHSHWEDIAALVEVL 288 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 DIP G + DA ++ G + I P + + + VG Sbjct: 289 DIPVLGNGDVFCAADALEMFRETGCAGVEIGRAVQGRPWIFREITAALWGLPVPVGPSLG 348 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 A + H V + + + + + +E Sbjct: 349 EVANVARRHAEGLVAHYGNELVALRDMRKHLGWYFRGF-------GLGGEMRGRLARVES 401 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 L ++ + H E D Sbjct: 402 LAELEQATH----------------ELIERLGAD 419 >UniRef50_A5FL15 tRNA-dihydrouridine synthase B-like protein n=14 Tax=Bacteroidetes RepID=A5FL15_FLAJ1 Length = 332 Score = 86.3 bits (212), Expect = 9e-16, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 64/225 (28%), Gaps = 13/225 (5%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE------VIDIPFCVAGGIKSLEDAA 90 + GAD + + + + + + + + GG + + + Sbjct: 31 RLCKTHGADMMY----SEFISSEGLIRDAIKSRMKLDIFDYERPVGIQIFGGDEEAMEMS 86 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + ++ + GV V + A + Sbjct: 87 SKIVSTVKPDLVDINFGCPVKKVVCRGAGAGVLKDVDLMVRLTKAVIKGTDLPVTVKTRL 146 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHV--PLIAS 207 + + + +Q G + ++ + + G+ D + +V+ + P+ + Sbjct: 147 GWDESSINIDEVAERLQDIGVQALTIHARTRAQMYKGHSDWSHIARVKNNPRITMPIFGN 206 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 G + E L+ + +DG + E+K Y T Sbjct: 207 GDIDSPEKALQYKNEYGIDGIMIGRAAIGYPWIFNEIKHYFKTGE 251 Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 55/169 (32%), Gaps = 7/169 (4%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV- 60 L K +I D+ VK + I +I +A+R + G L + T + + Sbjct: 128 LTKAVIKGTDL--PVTVKTRLGWDESSI-NIDEVAERLQDIGVQALTIHARTRAQMYKGH 184 Query: 61 VDKSWVSRVAEVIDI--PFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLA 117 D S ++RV I P G I S E A + +G D I I A+ P + + Sbjct: 185 SDWSHIARVKNNPRITMPIFGNGDIDSPEKALQYKNEYGIDGIMIGRAAIGYPWIFNEIK 244 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 F + E + H+ + + Sbjct: 245 HYFKTGEHLPAPTVIDRVEAARNHLKWSMEWKGERLGIVEMRRHYTNYF 293 >UniRef50_B9K738 TIM-barrel protein, nifR3 family n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K738_THENN Length = 273 Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 26/201 (12%), Positives = 55/201 (27%), Gaps = 7/201 (3%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + + E + L AA +LS I +N+ + Sbjct: 6 GFLMNSEKTRELLPSPEEKNVAVQIFGSDPEELSRAADVLSDEYPWIDLNAGCPVRKVVK 65 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + HV ++R + + + + + G E Sbjct: 66 KGAGGGLLRDLDLFRAVVKELR----KHVKGKFTVKTRLGWNENQISKIYEILVEEGVDE 121 Query: 174 IVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + ++ G D + L + + +P SG + E A ++ G L A Sbjct: 122 VFIHTRTVAQAFTGKADWKSLSVLDK--KIPTFVSGDIFSPEDAKRALEESGCHGVLVAR 179 Query: 233 VFHKQIINIGELKAYLATQGV 253 + ++K +L Sbjct: 180 GAIGRPWLFKQIKDFLERGKY 200 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 7/116 (6%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 V+ VK N I I + EEG DE+ + T + D +S + Sbjct: 90 VKGKFTVKTRLGWNENQISKIYEI---LVEEGVDEVFIHTRTVAQAFTGKADWKSLSVLD 146 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCI 125 + IP V+G I S EDA + L G + + A+ P L ++ D Sbjct: 147 K--KIPTFVSGDIFSPEDAKRALEESGCHGVLVARGAIGRPWLFKQIKDFLERGKY 200 >UniRef50_A1VHK2 Dihydrouridine synthase, DuS n=10 Tax=Desulfovibrionaceae RepID=A1VHK2_DESVV Length = 449 Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 58/223 (26%), Gaps = 8/223 (3%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDAAKI 92 + GA + ++ E + + G I + + Sbjct: 50 LCRKAGAAVCCTEMVSAKGLIYYSPGTRDLLATTPEDAPLVVQLFGCDPDIM-VRAMEPL 108 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 L G +N P ++ ++ + + Sbjct: 109 LEQGFRWFDLNMGCSV-PKVVKTGCGAAMLRDVPQALAVARAMLRTAGAGRVGFKFRLGW 167 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 V Q D + + GAG + L+ +G L ++ VP+IASG Sbjct: 168 DVGQEVWADLGRALADLGAGWVTLHPRYARQGFSGEARWSTLGELVRAVSVPVIASGDLF 227 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 T + R+ V + A + +A + Sbjct: 228 TAADGVRCLRETGVASVMYARGALNDPGVFHAHRERVAGRPDP 270 Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 60/203 (29%), Gaps = 14/203 (6%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + L + A+ GA + + A S + + + +P Sbjct: 162 KFRLGWD-VGQEVWADLGRALADLGAGWVTLHPRYARQGFSGEARWSTLGELVRAVSVPV 220 Query: 78 CVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 +G + + D + G + AL DP + +R + A Sbjct: 221 IASGDLFTAADGVRCLRETGVASVMYARGALNDPGVFHAHRERVAGRPDPGYTPQRLRAL 280 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV 196 ++ R+ + + T GA + + + + ++ E L ++ Sbjct: 281 ITRHAELARQYAPGRSALLKMRTFVPRYVRHLPGARAL------RQHLASCFEWEMLDEL 334 Query: 197 -----REVCHVPLIASGGAGTME 214 +V P+ G G E Sbjct: 335 LATFFADVPTCPVTPEGRGGKPE 357 >UniRef50_C7GZ00 tRNA-dihydrouridine synthase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ00_9FIRM Length = 336 Score = 85.9 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 21/212 (9%), Positives = 57/212 (26%), Gaps = 11/212 (5%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-- 93 E GA + + + + I + G + A + Sbjct: 33 IALEFGAGLVYSEMVSAKGLIYEQKNTEELLDFRGADGFIAIQIFG--SDPDAVAHGIQC 90 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + G + IN + + + ++ + + V Sbjct: 91 IENKGNAIVDINMGCPMQKIVKSGSGAALMKRPDIIYDMVKDAVKITQKPVTA--KIRIG 148 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGA 210 +D + ++ GA + ++ G + + + V++ +P+I +G Sbjct: 149 WDNNNINAVDCAKAIESAGASAVAVHGRTAKQKYEGSVNRDVIASVKQSVSIPVIGNGDI 208 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + + LE + D + + Sbjct: 209 KSAKEALEFMDETGCDMVMIGRGAIGKPWIFK 240 Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 3/140 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIPF 77 K ++ I + V AK GA + + TA ++ ++ V + + IP Sbjct: 144 KIRIGWDNNNI-NAVDCAKAIESAGASAVAVHGRTAKQKYEGSVNRDVIASVKQSVSIPV 202 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G IKS ++A + + G D + I A+ P + ID + E Sbjct: 203 IGNGDIKSAKEALEFMDETGCDMVMIGRGAIGKPWIFKSCNMALSEIRKGKSIDEITEYE 262 Query: 137 TGKYHVNQYTGDESRTRVTQ 156 + V+ Sbjct: 263 PCADEILNTLKKLIDLTVSY 282 >UniRef50_C6C170 Dihydrouridine synthase DuS n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C170_DESAD Length = 323 Score = 85.9 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 60/200 (30%), Gaps = 4/200 (2%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLED-AAKILSFGADKISINSPALADPT 111 K+ ++ E + + GG + D +++ G +NS Sbjct: 45 GLKYDGKGTKALLATCPEDNPLVVQLFGGEPQDYSDTMPQLIDEGYSFFDLNSGCPVKKV 104 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 L T + ++T + L+ + ++ G Sbjct: 105 LKTGGGSALHLDPDR-LVETASAMVRVAGEGKVGVKIRLGFMNGEDNFLEIAKRLEDTGV 163 Query: 172 GEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 + ++ + +G D +L +++ +P+I SG T E +E + +DG + Sbjct: 164 AWLTMHPRYAKQMFSGQADWSKLAVLKQNVSIPVIGSGDLFTAEDGMECIKQTGIDGIMF 223 Query: 231 ASVFHKQIINIGELKAYLAT 250 A L Sbjct: 224 ARGALFDPEIFARYLKLLDD 243 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 4/166 (2%) Query: 14 DGQV-VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE 71 +G+V VK + + + +AKR + G L + A D S ++ + + Sbjct: 133 EGKVGVKIRLGFMNGE-DNFLEIAKRLEDTGVAWLTMHPRYAKQMFSGQADWSKLAVLKQ 191 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + IP +G + + ED + + G D I AL DP + R Sbjct: 192 NVSIPVIGSGDLFTAEDGMECIKQTGIDGIMFARGALFDPEIFARYLKLLDDPKCATLPP 251 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 ++ D S + ++ G I Sbjct: 252 FDLGKTMEEHINMTRDFDGSNRSFRKIRSILPRYAKGMDGIRSIRT 297 >UniRef50_A7BE39 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BE39_9ACTO Length = 411 Score = 85.9 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 32/109 (29%), Gaps = 1/109 (0%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLI 205 D QK GA + L+ Q+ G +++ +++++ +P+ Sbjct: 183 KIRIGIDSEHETATDAALNAQKLGAAALTLHARTQNQHYAGHAHWDEIARLKDLLDIPVF 242 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +G L DG + ++ A + Sbjct: 243 GNGDVFEAADALAMLEQTGCDGISVGRGAQGRPWIFRDIVAAYHGGSIP 291 Score = 67.8 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 45/154 (29%), Gaps = 3/154 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVI 73 VK + E A + GA L + T ++R+ +++ Sbjct: 179 PVTVKIRIGIDSEHETAT-DAALNAQKLGAAALTLHARTQNQHYAGHAHWDEIARLKDLL 237 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 DIP G + DA +L G D IS+ A P + + + I G Sbjct: 238 DIPVFGNGDVFEAADALAMLEQTGCDGISVGRGAQGRPWIFRDIVAAYHGGSIPPGPSLA 297 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + H D+ E + Sbjct: 298 EVVSVIECHAAWCVVDQGDEERALREMRKHIGWY 331 >UniRef50_D2QXV2 Dihydrouridine synthase DuS n=4 Tax=Planctomycetaceae RepID=D2QXV2_9PLAN Length = 354 Score = 85.9 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 62/229 (27%), Gaps = 12/229 (5%) Query: 38 RYAEEGAD-ELVFYDITASS----DGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAA 90 GA L + R ++ ++ E + + G + + A Sbjct: 32 IARRHGASYALCEVMLDKFLVTLKGDRKKNRHFLYLTDEDHPVAGQLMGAEPAEFAQGAL 91 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 ++ G D I IN L Q V + H+ Sbjct: 92 RLAEAGFDVIDINFGCPVKKVLGRCRGGFHLSQPDVALEIVRRTRDIVPAHIPVTVKMRR 151 Query: 151 RTRVTQWETLDWVQEVQ---KRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLI- 205 TQ + + + G I ++ G L +V+ +I Sbjct: 152 GLDDTQLSRDRFFEILDGAFAAGVAAITVHGRTVVQRYVGPSRWSFLTEVKRHVGSRVIL 211 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 SG + + L R+ VDG A + +A A + + Sbjct: 212 GSGDLFSAQDCLAMMRETGVDGVTVARGAIGNPWIFSQCRALDAGEPLP 260 >UniRef50_C1E909 tRNA-dihydrouridine synthase (Fragment) n=2 Tax=Micromonas RepID=C1E909_9CHLO Length = 353 Score = 85.9 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 7/172 (4%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + A L AA I++ D + IN R Sbjct: 93 LVQFCANDPDMLLKAASIVAPHCDGVDINFGCPQRIAKRGRYGAFLMDD----WETVHNL 148 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN---GYDLE 191 H++ + R +L + + V+ GA I ++ ++ R + Sbjct: 149 INKLDKHLSVPVTAKIRVYDDLETSLKYAKMVEAAGAQLIAVHGRTREQKRAADVRANWA 208 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 ++++++ VP++A+G T+ + DG L+A + + Sbjct: 209 FIREIKKQLKVPVLANGDIRTLAEAEKCLEATGADGVLSAEPLLENPSLFSD 260 Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 53/187 (28%), Gaps = 12/187 (6%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDI 75 K + + E + AK GA + + T + +++ + + + + Sbjct: 163 KIRVYDDLETS---LKYAKMVEAAGAQLIAVHGRTREQKRAADVRANWAFIREIKKQLKV 219 Query: 76 PFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P G I++L +A K L GAD + P L +P+L + Sbjct: 220 PVLANGDIRTLAEAEKCLEATGADGVLSAEPLLENPSLFSDPPLYSPSDPAHPLPVEGDV 279 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + E + G+ + + + + Sbjct: 280 NCE-----LLHEYLEITRTYQTPLRMVKGHVHNMVGSWLKEFTDLRDWLNKTPHSEMTVD 334 Query: 195 KVREVCH 201 K++ Sbjct: 335 KLQAWTK 341 >UniRef50_A5D1S4 Indole-3-glycerol phosphate synthase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D1S4_PELTS Length = 259 Score = 85.5 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 60/218 (27%), Gaps = 32/218 (14%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y E GA + GR D + V +P I Sbjct: 69 DPLRMAQEYGEAGAAAISVLTEERFFLGRPSD---LVSVRSETALPVLRKDFIIDPYQIF 125 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD + + + L + + Sbjct: 126 ESRVLGADAVLLIAAVLQG---------------------------GQLAELKALADELG 158 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE-QLKKVREVCHVPLIASGG 209 + + + T + GA I +N + + + L K+ + V +++ G Sbjct: 159 MSCLIEVHTEAELYRSLSAGAEIIGINNRDLGTFKTDLNKTLTLSKLIDGQKVTVVSESG 218 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + E ++ V AL + LK Sbjct: 219 IRSRNDI-EMLKECGVHAALVGEALVCRPDPGRALKEL 255 >UniRef50_B0ESC7 tRNA-dihydrouridine synthase, putative n=2 Tax=Entamoeba RepID=B0ESC7_ENTDI Length = 515 Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 24/213 (11%), Positives = 53/213 (24%), Gaps = 5/213 (2%) Query: 37 KRYAEEGAD--ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 K G D + +G+ + + V R + G L A + Sbjct: 187 KAVKRFGCDVTMTEMIMAESLVEGKTSEWALVKRDPSEDIFGIQLCVGNSLLAAKACQVL 246 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 D + + + I++ A + Sbjct: 247 NSVDCDFYELNCACPIDYVYKKGMGAQLIERPKRIESLLHAMRSVTERPVAIKVRTGKSS 306 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTM 213 + + GA + ++ +D D + +K+ + P+I G Sbjct: 307 NTIQDVLLPNCA-NYGAAMVSIHGRTRDQRYTKSADWDFIKQATTITQCPVIGVGDIYGY 365 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + +A V + E+K Sbjct: 366 KDYQKALE-CGVATVAIGRGALIKPWIYTEIKE 397 Score = 70.1 bits (170), Expect = 6e-11, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 49/165 (29%), Gaps = 3/165 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI 73 +K ++ I D++ A GA + + T + D ++ + + Sbjct: 295 PVAIKVRTGKSSNTIQDVL--LPNCANYGAAMVSIHGRTRDQRYTKSADWDFIKQATTIT 352 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 P G I +D K L G ++I AL P + T + ++ Sbjct: 353 QCPVIGVGDIYGYKDYQKALECGVATVAIGRGALIKPWIYTEIKEKRDWDISSSERLDIL 412 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + + + ++ ++ + ++ Sbjct: 413 RQYALDGLSHWGSDAQGISKTREFMCHHLTFMTRYVPVHCVIETN 457 >UniRef50_A8M908 Histidine biosynthesis protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M908_CALMQ Length = 228 Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 90/241 (37%), Gaps = 28/241 (11%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE-----IIGDIVPLAKRYAEEGADELVFYDITASS 56 +++ +IP +D+ +G VVK V+ + + + L K Y + D+ + Sbjct: 1 MSRLVIPSIDLSNGLVVKRVRGVKGSELVKLNLNEALSLVKDY-----PFIHVVDLNGAE 55 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 G+ ++ ++++ ++ V GG++ +EDA +L + ++ + + A+ +P L+ + Sbjct: 56 LGKPINVDSIAKIGATVNGRCEVGGGVRVIEDAELLLKY-CSRVVLGTVAVENPALLLNM 114 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 +R GV ++ ++ Sbjct: 115 INRLGVDK-------------VAVSLDTDGEWLMTRGWGVRARRIMDALSNLPRVSAVIY 161 Query: 177 NMMNQDGVRNGY--DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 ++ +G G + E +K++R+ + +GG + E DG + Sbjct: 162 TNVSVEGTGMGPRVNGELVKRLRD-IGKEVYYAGGVSSCSDV-EYLWGLGFDGVIIGYAL 219 Query: 235 H 235 + Sbjct: 220 Y 220 Score = 43.2 bits (100), Expect = 0.008, Method: Composition-based stats. Identities = 9/84 (10%), Positives = 27/84 (32%), Gaps = 2/84 (2%) Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 I + +N + +++ + K+ + GG +E + + +V Sbjct: 46 IHVVDLNGAELGKPINVDSIAKIGATVNGRCEVGGGVRVIEDAELLLKY--CSRVVLGTV 103 Query: 234 FHKQIINIGELKAYLATQGVEIRI 257 + + + L V + + Sbjct: 104 AVENPALLLNMINRLGVDKVAVSL 127 >UniRef50_B9JW92 Nitrogen regulation protein n=4 Tax=Rhizobiales RepID=B9JW92_AGRVS Length = 332 Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 3/157 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 E A + GAD I IN A + + + +A + Sbjct: 86 WMAEAAKIAEANGADIIDINMGCPAKKVIGGYAGSALMREPEIALAMI--EATVKAVSIP 143 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 D + Q G I ++ + G D + + VR+ ++ Sbjct: 144 VTVKMRLGWDSDSINAPDLSRRAQDAGVQAITVHGRTRMQFYEGRADWDAIAAVRDAIYI 203 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 PLIA+G T+ E R + D + + Sbjct: 204 PLIANGDIDTLGDAQEILRRSGADAIMLGRACQGRPW 240 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + + I L++R + G + + T D ++ V + I Sbjct: 143 PVTVKMRLGWDSDSINAP-DLSRRAQDAGVQAITVHGRTRMQFYEGRADWDAIAAVRDAI 201 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTL 112 IP G I +L DA +IL GAD I + P Sbjct: 202 YIPLIANGDIDTLGDAQEILRRSGADAIMLGRACQGRPWH 241 >UniRef50_UPI000179183B PREDICTED: similar to tRNA-dihydrouridine synthase 4-like (PP35) n=1 Tax=Acyrthosiphon pisum RepID=UPI000179183B Length = 350 Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 68/242 (28%), Gaps = 13/242 (5%) Query: 8 PCLDV---RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKS 64 P +D+ D + VK L + Y D L F + + K+ Sbjct: 5 PVIDLFDDPDKKFVKICAPMVRYSRLQFRKLIRMYE---CD-LCFTPMIMADCYVKSAKA 60 Query: 65 WVSRVA-EVIDIPFCVAGGIK---SLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + D P V G +A+ ++ D + +N L + Sbjct: 61 RAHEFQTDTDDRPLIVQFGANNSSDFVNASNLIIPYCDGVDLNCGCPQRWALNEGYGAQL 120 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 ++ + R +++D Q+++ G I ++ Sbjct: 121 LKNPEIIKDCVRQLRNHLPTNKTISVK--LRLLDDHRQSVDLCQQIEATGVSFITVHGRT 178 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 D E LK + E VP+I +G + + G ++A Sbjct: 179 ALQKNEPIDQECLKLINESVSVPVILNGDIKNLSDAITMQEYTGCRGMMSARGILHNPGL 238 Query: 241 IG 242 Sbjct: 239 FA 240 Score = 76.3 bits (186), Expect = 8e-13, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 4/132 (3%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI 75 VK +H V L ++ G + + TA +D+ + + E + + Sbjct: 144 ISVKLRLLDDHRQS---VDLCQQIEATGVSFITVHGRTALQKNEPIDQECLKLINESVSV 200 Query: 76 PFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P + G IK+L DA + + G + L +P L + Sbjct: 201 PVILNGDIKNLSDAITMQEYTGCRGMMSARGILHNPGLFAGYQTTPLSAVQDWLNIKHTN 260 Query: 135 AETGKYHVNQYT 146 +H+ Sbjct: 261 FLWFHHHLVFMC 272 >UniRef50_C3MBL4 tRNA-dihydrouridine synthase n=1 Tax=Rhizobium sp. NGR234 RepID=C3MBL4_RHISN Length = 342 Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 3/103 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 VR +K + I + +A+R E G + + T D + V Sbjct: 147 VRVPVTLKMRLGWDENSINAPL-IARRAEEAGVQAITIHGRTRMQFYNGNADWDAIRAVR 205 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTL 112 +VI IP G + ++ DA +IL GAD + + P Sbjct: 206 DVISIPLIANGDVDTIADAMEILRRSGADAVMLGRSCQGRPWH 248 Score = 83.2 bits (204), Expect = 8e-15, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 3/157 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 E A + + GAD + IN A +A V Sbjct: 93 WMAEAAKIVEANGADIVDINMGCPAKKVTGGYSGSALMRDPDHALS--LIEATVKAVRVP 150 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 + ++ G I ++ + NG D + ++ VR+V + Sbjct: 151 VTLKMRLGWDENSINAPLIARRAEEAGVQAITIHGRTRMQFYNGNADWDAIRAVRDVISI 210 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 PLIA+G T+ +E R + D + + Sbjct: 211 PLIANGDVDTIADAMEILRRSGADAVMLGRSCQGRPW 247 >UniRef50_Q6MNE9 Nitrogen regulation protein nifR3 n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNE9_BDEBA Length = 352 Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 3/188 (1%) Query: 64 SWVSRVAEVIDIPFCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + E +P + + E +++ +GA+ I IN L Sbjct: 67 ETMRAAYEPGLVPQILGNEEDAIAESVKRLVEWGAEAIDINMGCPVQKALKHNYGVALMG 126 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + V+ + E L +V +++ GA + L+ Sbjct: 127 DPAYAAEVVRMTVKNSTVPVSVK-LRAVGSTKEFDELLTFVSGLRQSGAAWVCLHPRTAA 185 Query: 183 GVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 R G D EQ+K++ + P+I +G T + + ++ D A+A + + Sbjct: 186 QKRRGNADWEQIKQLHKAVDFPVIGNGDVQTYDDAINMLKETGCDMAMAGRGLAARPWMM 245 Query: 242 GELKAYLA 249 +L L Sbjct: 246 WQLGEELG 253 Score = 69.7 bits (169), Expect = 8e-11, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 2/113 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + + +++ + GA + + TA+ R D + ++ + + Sbjct: 145 PVSVKLRAVGSTKEFDELLTFVSGLRQSGAAWVCLHPRTAAQKRRGNADWEQIKQLHKAV 204 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCI 125 D P G +++ +DA +L G D A P ++ +L + G Sbjct: 205 DFPVIGNGDVQTYDDAINMLKETGCDMAMAGRGLAARPWMMWQLGEELGFAPP 257 >UniRef50_Q9VPM1 CG3645, isoform A n=9 Tax=Diptera RepID=Q9VPM1_DROME Length = 505 Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 52/184 (28%), Gaps = 6/184 (3%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + E + G + D L P I + +G Sbjct: 74 DALQTCPEDRPLIIQFCG--NDAQQILDAALLAQDHCDAVDINLGCPQAIAK-RGHYGSF 130 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 T + + R +T+ + + ++ G + ++ ++ Sbjct: 131 LQDEWELLTEIVSTLHAKLAVPVTCKIRIFEDLEKTIRYAKMLEAAGCQLLTVHGRTREQ 190 Query: 184 VR---NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + +K VR+ +P++A+G ++ + VDG ++A Sbjct: 191 KGPLTGVANWNYIKNVRQHIKIPMLANGNILALDDVHRCLTETGVDGVMSAEGNLHNPAI 250 Query: 241 IGEL 244 + Sbjct: 251 FKGV 254 Score = 82.8 bits (203), Expect = 9e-15, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 41/147 (27%), Gaps = 7/147 (4%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSR 68 + K F E + + AK G L + T G + + +++ Sbjct: 149 LAVPVTCKIRIF---EDLEKTIRYAKMLEAAGCQLLTVHGRTREQKGPLTGVANWNYIKN 205 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVV 127 V + I IP G I +L+D + L G D + L +P + ++ Sbjct: 206 VRQHIKIPMLANGNILALDDVHRCLTETGVDGVMSAEGNLHNPAIFKGVSPPVWQMAHEY 265 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRV 154 + Sbjct: 266 LELVQLHPCPSSFIRGHLFKLFHHIMN 292 >UniRef50_C0W327 Dihydrouridine synthase n=2 Tax=Actinomyces RepID=C0W327_9ACTO Length = 438 Score = 84.8 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 1/105 (0%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLI 205 LD + Q G + L+ G D + +++E C +P++ Sbjct: 203 KMRIGVDEEHETYLDAARAAQDAGVAALALHGRTARQHYAGKADWSAIARLKEACRIPVL 262 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +G T H LE R DG + + ++ L+ Sbjct: 263 GNGDTWTGSHALEMMRQTGCDGVVVGRGCQGRPWLFADIVHALSG 307 Score = 76.7 bits (187), Expect = 8e-13, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 3/108 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVI 73 VK + E + A+ + G L + T D S ++R+ E Sbjct: 199 PVTVKMRIGVDEE-HETYLDAARAAQDAGVAALALHGRTARQHYAGKADWSAIARLKEAC 257 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRF 120 IP G + A +++ G D + + P L + Sbjct: 258 RIPVLGNGDTWTGSHALEMMRQTGCDGVVVGRGCQGRPWLFADIVHAL 305 >UniRef50_A8PTG4 tRNA-dihydrouridine synthase 3 n=1 Tax=Malassezia globosa CBS 7966 RepID=DUS3_MALGO Length = 766 Score = 84.8 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 62/239 (25%), Gaps = 31/239 (12%) Query: 37 KRYAEEGADELV---FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-----IKSLED 88 + A G+D + + G + S V R V G + + E Sbjct: 412 RLCASFGSD-IHCGEMGMAESFLQGHASEWSLVRRWEGERIFGTQVCGAKPELLVPTAEV 470 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A+ + G D + +N D + + Sbjct: 471 LAREVGRGLDFVDVNCGCPIDLVYNKGAGSAL-LDHANKLGRIVRGMSEALGEIPLTIKL 529 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVRE--------- 198 + T + + + G G + L+ ++ D ++ + Sbjct: 530 RTGTTSKPTTHKIFARAQTEWGVGGLSLHGRSRKQRYKNDADWAYIRTCVDTLHDAVRTW 589 Query: 199 -----------VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + VP+ +G + + A VDG + A + E+K Sbjct: 590 NEEPQHADEPDMVPVPVYGNGDVYGWRDYYDHLEHAHVDGTMIARGALIKPWIFTEIKE 648 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 21/201 (10%), Positives = 49/201 (24%), Gaps = 26/201 (12%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA--- 70 +K + + A+ E G L + + + D +++ Sbjct: 524 PLTIKLRTGTTSKPTTHKI-FARAQTEWGVGGLSLHGRSRKQRYKNDADWAYIRTCVDTL 582 Query: 71 -----------------EVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTL 112 +++ +P G + D L D I AL P + Sbjct: 583 HDAVRTWNEEPQHADEPDMVPVPVYGNGDVYGWRDYYDHLEHAHVDGTMIARGALIKPWI 642 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG-- 170 T + +R + + + ++ + Sbjct: 643 FTEIKERRDWDISSRERLDMIRQYASYGLTHWGSDTQGVNTTRRFLCEMLSFTHRYVPLG 702 Query: 171 -AGEIVLNMMNQDGVRNGYDL 190 I + M ++ +G D Sbjct: 703 LLDHIPVRMNDRPPPFHGRDP 723 >UniRef50_Q5KP54 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans RepID=Q5KP54_CRYNE Length = 610 Score = 84.8 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 7/157 (4%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AAK + D + IN + T +++ Sbjct: 166 AAAKKVEHRCDAVDINFGCPQGIAKRGHYGSFLQDE----WELIHKLISTLHENLSVPVT 221 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVPL 204 + R +T+ + + ++ GA + + ++ D E +++V++ VP+ Sbjct: 222 AKFRIFPDLDKTIAYARMMEAAGAQILTCHGRTREMKGQNTGLADWEYIREVKKAVKVPV 281 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 A+G E DG + A Sbjct: 282 FANGNILYREDVDRCMEVTGCDGVMTAEGNLSNPAIF 318 Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 4/97 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 +FR + + A+ GA L + T G+ D ++ V + + +P Sbjct: 223 KFRIFPDLDKTIAYARMMEAAGAQILTCHGRTREMKGQNTGLADWEYIREVKKAVKVPVF 282 Query: 79 VAGGIKSLEDAAKILS-FGADKISINSPALADPTLIT 114 G I ED + + G D + L++P + Sbjct: 283 ANGNILYREDVDRCMEVTGCDGVMTAEGNLSNPAIFM 319 >UniRef50_A7AQM0 Dihydrouridine synthase, putative n=1 Tax=Babesia bovis RepID=A7AQM0_BABBO Length = 355 Score = 84.8 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 17/173 (9%), Positives = 52/173 (30%), Gaps = 5/173 (2%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I ++ AA++L + +N + + Sbjct: 70 IAQVCGDDAGTITQAARLLKGHVSAVDLNLGCPQAIAKDGHYGSFLLDEPD--LVTGIVS 127 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLE 191 T + + + + TL+ +++ G + ++ ++ D + Sbjct: 128 RVTREVGIAVTCKIRKVDKDSLQSTLNLCYSLEQSGCKALTVHGRHRSEKGTNVGAADWD 187 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 ++ ++ +P+IA+GG T D +++ ++ + Sbjct: 188 AIRIIKSRLRIPVIANGGIETFADVERCLSYTGADAVMSSESLLERPYLFSGI 240 Score = 74.0 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 59/208 (28%), Gaps = 12/208 (5%) Query: 15 GQVV--KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRV 69 G V K + + + + + L + G L + S G D + + Sbjct: 134 GIAVTCKIRK-VDKDSLQSTLNLCYSLEQSGCKALTVHGRHRSEKGTNVGAADWDAIRII 192 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVV- 127 + IP GGI++ D + LS+ GAD + + L P L + + Sbjct: 193 KSRLRIPVIANGGIETFADVERCLSYTGADAVMSSESLLERPYLFSGITYDHLDIMDEYL 252 Query: 128 -GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN---QDG 183 + + D + + + + +V + Sbjct: 253 GIVRRYPDQSPCCIRGHAFKILFQHCQRHPEIRNRLTDAMSLDDFSSVVSYLRTVDLGME 312 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAG 211 + ++ R + +S G Sbjct: 313 SYTHVEGSWYRRHRSAAGIVPNSSSGVN 340 >UniRef50_UPI0001BCCF0E nifR3 family TIM-barrel protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCCF0E Length = 429 Score = 84.8 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 40/161 (24%), Gaps = 2/161 (1%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY-HVNQYTGDESRT 152 G D + +N + ++G V Sbjct: 146 DHGVDHVDLNFGCPVPKVTRKGGGAALPWKATLLGRILTEAVAAAAPFGVPVTMKTRKGI 205 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 LD + G I L+ +G D + ++ +P++ +G Sbjct: 206 DDDHLTYLDAGHIAEDSGCAAIALHGRTAVQHYSGEADWAAIAALKAAVSIPVLGNGDVW 265 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 L R+ DG + + +L A + Sbjct: 266 EAADALRMVRETGCDGVVVGRGCLGRPWLFRDLAAAFTGEE 306 Score = 61.7 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 3/107 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + + + + + G + + TA D + ++ + + IP Sbjct: 200 KTRKGIDDDHLT-YLDAGHIAEDSGCAAIALHGRTAVQHYSGEADWAAIAALKAAVSIPV 258 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQ 123 G + DA +++ G D + + L P L LA F + Sbjct: 259 LGNGDVWEAADALRMVRETGCDGVVVGRGCLGRPWLFRDLAAAFTGE 305 >UniRef50_C7LQM9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibrionales RepID=C7LQM9_DESBD Length = 324 Score = 84.4 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 26/222 (11%), Positives = 54/222 (24%), Gaps = 6/222 (2%) Query: 38 RYAEEGA-DELV-FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG--IKSLEDAAKIL 93 E G + + + + + G ++ ++ Sbjct: 29 LCHEYGCHAAVTEMVSAKGLIYDSPGTNELLQTCDQDSPLVVQLFGSEEPFLVQSIERLR 88 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 G +N + T + + Sbjct: 89 KAGFRYFDLNCGCPVRKVIKTGSGAALLKEPENLLKIAK-SMIDAAEPGCMGFKIRLGWY 147 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGT 212 V Q L ++++ GAG + ++ G D LK ++E +P+IASG Sbjct: 148 VGQPVYLQVATKLEELGAGWVTMHPRFGAQGFTGHADWSHLKTLKERVTLPVIASGDLFH 207 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 E ++ VD + A + Sbjct: 208 AEDAIKCIEQTSVDSIMFARGALNDPSIFTRYLQLRRHEEPP 249 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 50/160 (31%), Gaps = 7/160 (4%) Query: 19 KGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDI 75 K +G V +A + E GA + + + D S + + E + + Sbjct: 141 KIRLGW---YVGQPVYLQVATKLEELGAGWVTMHPRFGAQGFTGHADWSHLKTLKERVTL 197 Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P +G + EDA K + D I AL DP++ TR + + Sbjct: 198 PVIASGDLFHAEDAIKCIEQTSVDSIMFARGALNDPSIFTRYLQLRRHEEPPAKSWQQME 257 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + R + + TL GA + Sbjct: 258 DMVRRLSELYPQHGMDRLGLLKMRTLVPRFLKGLPGARAL 297 >UniRef50_UPI0001C41F9C hisA/hisF family protein HisAF n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41F9C Length = 231 Score = 84.4 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 31/246 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYD 51 ML IIP +D+ + V G D + +A GA E+ D Sbjct: 1 ML--EIIPVIDLMNSVAVSGKSGNRETYTPLQTIYASSSDPLEIALSLKSAGAKEMYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + + V +P + G+ LE +L F A KI + + L Sbjct: 59 LDFIERNGNNNIFKIKEV--NSVLPVILDVGVDKLETFEFLLEF-AYKIIVATETLESIE 115 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + ++ +++ + I+V +D + + + + + +++ Sbjct: 116 ELGKIFEKYPKERIIVSVDVKNNELY--------------AKNMDLDLEGFKEVLRRIDP 161 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 EI+L ++ G G++ L+ E +I GG T + + + AL Sbjct: 162 NEIILLDISSVGTEGGFNKPLLESFEEFKD-KIILGGGI-TPDEISQ-LDALGIRKALVG 218 Query: 232 SVFHKQ 237 + HK Sbjct: 219 TALHKG 224 >UniRef50_A8Y3E7 Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8Y3E7_CAEBR Length = 283 Score = 84.4 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 1/168 (0%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I L +AA+++ + + +N + ++ Sbjct: 50 IVQFATDDPFVLAEAAEMVYSCSSGVDLNCGCPKHDVRSKGFGSALLSKPELLADMVRQT 109 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 N + R +T+D ++ + G + ++ D+E ++ Sbjct: 110 R-ARISDENFSVSLKIRVNKEIEKTVDLCRKAESAGVTHLTVHGRTPSQHAEPIDIEAIR 168 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 V+ VP+IA+GG ++ + VDG +AA+ Sbjct: 169 LVKSAVKVPIIANGGITNLQEAMNLAEKTGVDGIMAANGLLDNPALFA 216 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 1/90 (1%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + R ++ I V L ++ G L + T S +D + V + +P G Sbjct: 123 KIRVNKEIEKTVDLCRKAESAGVTHLTVHGRTPSQHAEPIDIEAIRLVKSAVKVPIIANG 182 Query: 82 GIKSLEDAAKILSF-GADKISINSPALADP 110 GI +L++A + G D I + L +P Sbjct: 183 GITNLQEAMNLAEKTGVDGIMAANGLLDNP 212 >UniRef50_Q2RTR9 Dihydrouridine synthase TIM-barrel protein nifR3 n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RTR9_RHORT Length = 362 Score = 84.4 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 43/158 (27%), Gaps = 3/158 (1%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 E A ++ GA+ I IN + +A G + Sbjct: 85 MAEAARRVEGAGAELIDINMGCPVRKVVGGLGGSALMRDLP--LAARILEAVVGAVTLPV 142 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVP 203 ++ + + G + ++ + + +G D + V+ +P Sbjct: 143 SLKMRLGWDDASRNAVELARLAESAGISRLTVHGRTRAQMYDGRADWPAIGLVKRAVSLP 202 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +IA+G + E DG + Sbjct: 203 VIANGDVTNLSEAREILAVTGADGVMIGRAALGAPWLP 240 Score = 84.0 bits (206), Expect = 4e-15, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 48/159 (30%), Gaps = 6/159 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + V LA+ G L + T + D + V + +P Sbjct: 145 KMRLGWDDA-SRNAVELARLAESAGISRLTVHGRTRAQMYDGRADWPAIGLVKRAVSLPV 203 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G + +L +A +IL+ GAD + I AL P L +A + Sbjct: 204 IANGDVTNLSEAREILAVTGADGVMIGRAALGAPWLPGAIARAIAAGTRETPPPALAERA 263 Query: 137 TGKYHVNQYTGDESRTRV---TQWETLDWVQEVQKRGAG 172 + T + + W +GA Sbjct: 264 AVMAAHLEGLLACHGLERGLKTSRKHMGWYARTMPQGAD 302 >UniRef50_Q54ES7 tRNA-dihydrouridine synthase 4-like protein n=1 Tax=Dictyostelium discoideum RepID=Q54ES7_DICDI Length = 344 Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 62/209 (29%), Gaps = 8/209 (3%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED---AAKILS 94 + G D I A+ R +D P V G+ + E+ AA+ + Sbjct: 73 LVKKWGCDITYTPMIMAAEFNRSEAARDSDFTINKLDEPLIVQFGVNNAEELVSAAEKVK 132 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 I IN + + + ++ +S + Sbjct: 133 DYCQGIDINCGCPQRWVMKEGFGANLLLHPERIYDMVKQINNRVPIPISIKIRVQSDLKD 192 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTM 213 T + ++ G I ++ + D + +K V++ +P+ A+G T+ Sbjct: 193 TIEL----AKRAERIGVSWITVHGRTSAMKSSHPVDYDAIKLVKDNVTLPVFANGDVFTL 248 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIG 242 E V+G ++A Sbjct: 249 SQSNEIREKTGVNGVMSARGLLTNPALFQ 277 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 21/155 (13%), Positives = 47/155 (30%), Gaps = 2/155 (1%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFC 78 ++ R + D + LAKR G + + T++ VD + V + + +P Sbjct: 181 SIKIRVQSDLKDTIELAKRAERIGVSWITVHGRTSAMKSSHPVDYDAIKLVKDNVTLPVF 240 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAET 137 G + +L + +I G + + L +P L Sbjct: 241 ANGDVFTLSQSNEIREKTGVNGVMSARGLLTNPALFQGYDKTPIECIKDFINIYSEYGGL 300 Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 +++ + E ++ + G Sbjct: 301 HPVIFHRHLMYMLYEYHNKNEKSEFNKLSTISGIM 335 >UniRef50_C1MXD1 Dihydrouridine synthase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MXD1_9CHLO Length = 424 Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 43/158 (27%), Gaps = 1/158 (0%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 A ++ +N A+ V + T Sbjct: 125 ETRAPRVDLNCGCPANVVTGKGAGSSLLRDPNDVYACVSAIRRGCEGTGCVPTLKLRSGY 184 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 + + Q+ GA + L+ + +G + + + E VP+I +G + Sbjct: 185 DDDSLLRENLLAAQEGGAAFVTLHPRTRRQGYSGRANWKDIAIAVETLDVPVIGNGDVTS 244 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 E + G + + + +KA L Sbjct: 245 PERARALLFETGCAGIMVGRGAVQDPLVFRRIKAELRA 282 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 4/109 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + + E GA + + T + ++ E +D+P Sbjct: 179 KLRSGYDDDSLLR--ENLLAAQEGGAAFVTLHPRTRRQGYSGRANWKDIAIAVETLDVPV 236 Query: 78 CVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCI 125 G + S E A +L G I + A+ DP + R+ Sbjct: 237 IGNGDVTSPERARALLFETGCAGIMVGRGAVQDPLVFRRIKAELRAGDW 285 >UniRef50_Q884C6 tRNA-dihydrouridine synthase C n=13 Tax=Proteobacteria RepID=DUSC_PSESM Length = 317 Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 2/170 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+AA GA + +N A +R + ++ + Sbjct: 78 AENAAFACELGAPVLDLNFGCPAKTVNRSRGGAILLKEPELLHTIVSQVRRAVPKDIPVT 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPL 204 T LD + + GA +IV++ + E + +++EV VP+ Sbjct: 138 AKMRLGYENTD-GALDCARALADGGAAQIVVHARTKVDGYKPPAHWEWIARIQEVVKVPV 196 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +A+G T+E + + + ++ A + V Sbjct: 197 VANGEIWTVEDWRRCREICGARDIMIGRGLVARPDLARQIAAAQKGEEVV 246 Score = 66.7 bits (161), Expect = 6e-10, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 4/144 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + A+ A+ GA ++V + T + W++R+ EV+ +P Sbjct: 139 KMRLGYENTDG--ALDCARALADGGAAQIVVHARTKVDGYKPPAHWEWIARIQEVVKVPV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I ++ED + GA I I +A P L ++A + +V Sbjct: 197 VANGEIWTVEDWRRCREICGARDIMIGRGLVARPDLARQIAAAQKGEEVVPMTWAELQPM 256 Query: 137 TGKYHVNQYTGDESRTRVTQWETL 160 + + + Sbjct: 257 LRTFWQACLVKMTLVQAPGRLKQW 280 >UniRef50_Q6P1R4 tRNA-dihydrouridine synthase 1-like n=12 Tax=Euteleostomi RepID=DUS1L_HUMAN Length = 473 Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 10/175 (5%) Query: 74 DIPFCVAGGIKSLE---DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 D P V E AA + D I +N + Sbjct: 73 DRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDE----WDL 128 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NG 187 ++ + R +T+ + Q ++K G + ++ ++ Sbjct: 129 LQRMILLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGA 188 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 E +K VR+ +P+ A+G ++ RD V G ++A Sbjct: 189 ASWEHIKAVRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFE 243 Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 34/130 (26%), Gaps = 7/130 (5%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSR 68 + K F I V A+ + G L + T G + Sbjct: 140 LSVPVTCKIRVF---PEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKA 196 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVV 127 V + + IP G I+ L+D + L G + L +P L + Sbjct: 197 VRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFEGRSPAVWELAEEY 256 Query: 128 GIDTWYDAET 137 Sbjct: 257 LDIVREHPCP 266 >UniRef50_B9CKJ9 tRNA-dihydrouridine synthase B n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKJ9_9ACTN Length = 361 Score = 84.0 bits (206), Expect = 4e-15, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 60/212 (28%), Gaps = 7/212 (3%) Query: 46 ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-IKSLEDAAKILS--FGADKISI 102 + I G V + DI + G + +AA ++ G I Sbjct: 69 MVSVAGI---HFGGEKTWQLVYPLDPEPDIAVQLFGSKPEQFREAASQIAERLGPKLALI 125 Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDW 162 + + + + + V A + V V ++ Sbjct: 126 DINMACPVPKVVKKGEGSALLDNPVRAAEIVRACISEVDVPVTAKIRRGRTVGSECAPEF 185 Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 + ++ GA + ++ + G D +++V +P+I SG + + Sbjct: 186 ARALEAAGAAAVTVHGRFASQLYQGKADWNCVERVVCAVSIPVIGSGDVMSAHDAARVLK 245 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGV 253 + + A + + A + + Sbjct: 246 TTGISAVMLARGTYGDPWIFANTRRACAEKEL 277 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 40/139 (28%), Gaps = 5/139 (3%) Query: 47 LVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINS 104 + + AS D + V RV + IP +G + S DAA++L G + + Sbjct: 197 VTVHGRFASQLYQGKADWNCVERVVCAVSIPVIGSGDVMSAHDAARVLKTTGISAVMLAR 256 Query: 105 PALADPTLI---TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 DP + R + C + + ++ W Sbjct: 257 GTYGDPWIFANTRRACAEKELFCPTLSQRLSAFKLHVHLLEAAHIHIARARSLSTWYFRG 316 Query: 162 WVQEVQKRGAGEIVLNMMN 180 RG + + Sbjct: 317 VPHAAYWRGRSVRCVTASD 335 >UniRef50_A0EG06 Chromosome undetermined scaffold_94, whole genome shotgun sequence n=4 Tax=Intramacronucleata RepID=A0EG06_PARTE Length = 360 Score = 84.0 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 60/189 (31%), Gaps = 9/189 (4%) Query: 64 SWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + E + + G + L AA ++ D I IN Sbjct: 64 EFFTTCPEDRPLFAQLCGHDPQVLIKAALMIQDQCDAIDINLGCPQGIARKGLYGAYLLE 123 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + V + V + T +++Q+ G + ++ ++ Sbjct: 124 KREQVLTIVKELKQNINVPVTCKIRMFKDRKRTLDL----TKDIQEAGCSILTVHGRTKE 179 Query: 183 GVR---NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + D + +++++ +P+ A+GG T ++ VD +++ + Sbjct: 180 QNKDFVGQCDWTIIAEIKQILQIPVFANGGIYTWSDVERCLQETKVDAVMSSEALLENPA 239 Query: 240 NIG-ELKAY 247 E+K Sbjct: 240 LFSGEIKDL 248 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 38/103 (36%), Gaps = 7/103 (6%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSR 68 + K F++ + + L K E G L + T + D + ++ Sbjct: 139 INVPVTCKIRMFKDRK---RTLDLTKDIQEAGCSILTVHGRTKEQNKDFVGQCDWTIIAE 195 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADP 110 + +++ IP GGI + D + L D + + L +P Sbjct: 196 IKQILQIPVFANGGIYTWSDVERCLQETKVDAVMSSEALLENP 238 >UniRef50_Q1NTJ9 Histidine biosynthesis n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTJ9_9DELT Length = 186 Score = 84.0 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 72/137 (52%) Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + I T + G+ + + + ++ GAGEI+LN ++ Sbjct: 48 PDEVPHRVIPTAFHGPNGEKYCWYQCTVKGGREGRDLDAATLAVACEELGAGEILLNCID 107 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +DG +G+DLE +K V+E +P+IAS GAG EHF E F D ALAA +FH++ + Sbjct: 108 KDGTNSGFDLELVKMVKEAVTIPVIASSGAGKPEHFSEVFTVTGADAALAAGIFHRREVA 167 Query: 241 IGELKAYLATQGVEIRI 257 I E+K +L G+E+R+ Sbjct: 168 ISEVKEHLQRHGIEVRL 184 Score = 47.0 bits (110), Expect = 6e-04, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 36/108 (33%), Gaps = 4/108 (3%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIP 76 VKG R + D LA E GA E++ I D V V E + IP Sbjct: 74 TVKG--GREGRDL-DAATLAVACEELGAGEILLNCIDKDGTNSGFDLELVKMVKEAVTIP 130 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQ 123 + G E +++ + GAD I+ + + Sbjct: 131 VIASSGAGKPEHFSEVFTVTGADAALAAGIFHRREVAISEVKEHLQRH 178 >UniRef50_B9L781 tRNA-dihydrouridine synthase B n=1 Tax=Nautilia profundicola AmH RepID=B9L781_NAUPA Length = 313 Score = 84.0 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 22/179 (12%), Positives = 47/179 (26%), Gaps = 5/179 (2%) Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVVG 128 E A +++ A +I++ D I IN + + Sbjct: 65 ENPYFVQIAANNVENAVKAVEIINELNWIDGIDINLGCPVNKARRSGFGGVLLKDENRDF 124 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG- 187 + + E + ++ G + ++ + G Sbjct: 125 LKEVVGTIVKTSKKPVSAKMRIGFDKSVVEDRAKL--LEDLGIVFLTIHGRTVKQMYKGE 182 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 D +++KK +P+IA+G E G + E+K Sbjct: 183 ADYDEIKKGVNAVKIPVIANGDITDYEKAKYVLEYTGASGVSIGRGAVGKPWIFLEMKQ 241 Score = 73.6 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 7/156 (4%) Query: 4 KRIIPCLDVRDGQVV--KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV- 60 K ++ + + V K + ++ D AK + G L + T + Sbjct: 126 KEVVGTIVKTSKKPVSAKMRIGFDKSVVED---RAKLLEDLGIVFLTIHGRTVKQMYKGE 182 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADR 119 D + + + IP G I E A +L + GA +SI A+ P + + + Sbjct: 183 ADYDEIKKGVNAVKIPVIANGDITDYEKAKYVLEYTGASGVSIGRGAVGKPWIFLEMKQQ 242 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 + Y +Y R Sbjct: 243 GNITSEQKKEVILEHFNQMVYWYGEYGVILFRKHAH 278 >UniRef50_Q4PG83 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4PG83_USTMA Length = 527 Score = 84.0 bits (206), Expect = 5e-15, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 57/169 (33%), Gaps = 7/169 (4%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + ++L AAK++ D + +N + Sbjct: 136 FVQFCSNDPETLLKAAKVVEDRCDAVDLNLGCPQHIARRGHYGSYLMED----WSLIFSL 191 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLE 191 ++ + R + +T+ + + +++ GA I ++ ++ D Sbjct: 192 INILHVNLKVPVTAKMRVYESVEKTITYARLLERAGAQIITVHGRTRNMKGHLTGLADWA 251 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +++ V+E +VP+ A+G + F +A DG ++A Sbjct: 252 KIRAVKEAVNVPVFANGNVLYPQDFYDALAATGADGVMSAEGNLYNPAI 300 Score = 76.3 bits (186), Expect = 9e-13, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 41/105 (39%), Gaps = 7/105 (6%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR---VVDKSWV 66 ++++ K +E + + A+ GA + + T + G + D + + Sbjct: 197 VNLKVPVTAKMR---VYESVEKTITYARLLERAGAQIITVHGRTRNMKGHLTGLADWAKI 253 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 V E +++P G + +D L+ GAD + L +P Sbjct: 254 RAVKEAVNVPVFANGNVLYPQDFYDALAATGADGVMSAEGNLYNP 298 >UniRef50_C4VA23 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4VA23_NOSCE Length = 327 Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 15/215 (6%) Query: 35 LAKRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIP---FCVAGGIKSLEDA 89 LA+RY GAD + ++ S ID P + + Sbjct: 28 LARRY---GADICYTEMVNCDTFIRSKINPLSNRWYTTNKIDRPLIIQICGNDVNKMLKV 84 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + IL D I IN + + V + K V + Sbjct: 85 SLILQEYCDAIDINLGCPQEIARKGNYGSFLMDDLLKVKEIVTVLSNNLKVPV----TCK 140 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLIA 206 R + +++++ + +++ G + ++ +D + ++ ++ ++P+I+ Sbjct: 141 IRIFESIEKSVEYAKMIEQAGCKMLTVHGRTRDQRGLNTGLASWDHIRAIKASLNIPVIS 200 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 +G DG + A + Sbjct: 201 NGNIINNSDIDNCVEYTKCDGVMVAETHLYNPLIF 235 Score = 77.5 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 47/145 (32%), Gaps = 9/145 (6%) Query: 4 KRIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG--- 58 K I+ L +++ K F E I V AK + G L + T G Sbjct: 123 KEIVTVLSNNLKVPVTCKIRIF---ESIEKSVEYAKMIEQAGCKMLTVHGRTRDQRGLNT 179 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLA 117 + + + ++IP G I + D + + D + + L +P + + Sbjct: 180 GLASWDHIRAIKASLNIPVISNGNIINNSDIDNCVEYTKCDGVMVAETHLYNPLIFIKRH 239 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHV 142 + + ++ + + Sbjct: 240 SKTNISIYKEYLNIFLENYNEYDIH 264 >UniRef50_C9RDE9 Indole-3-glycerol-phosphate synthase n=1 Tax=Ammonifex degensii KC4 RepID=C9RDE9_AMMDK Length = 266 Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 63/226 (27%), Gaps = 31/226 (13%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D V +A+ Y GA + G+ V ID+P + Sbjct: 64 RPDADPVKIARLYQRGGAAAVSVLVDERFFGGKPAFLRLVRW---EIDLPLLYKEFVLDP 120 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + GAD + + + L L + + Sbjct: 121 YQVYEARLLGADAVLLIARLLRTEELRM---------------------------LKELA 153 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 + + + D +Q+ GA I +N + R +L + V +++ Sbjct: 154 ASLGMDSLVEVHSRDDLQKALAVGAEFIGINNRDLATFRVSLQTTRLLRPLIPPEVVVVS 213 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + G + L R+ VD AL +L+ + Sbjct: 214 ASGISSPL-ALTCLREWKVDAALIGEALMAAPDPEAKLRELVTAAE 258 >UniRef50_C5LCP2 tRNA-dihydrouridine synthase, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LCP2_9ALVE Length = 606 Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 56/227 (24%), Gaps = 17/227 (7%) Query: 37 KRYAEEGADELVFYDI---TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL----EDA 89 + G E+ ++ + G + + + + + VAGG + + Sbjct: 253 RLCVSLGC-EVTVSEMALAESLLKGNRAEHALLKKHPDEKIFGIQVAGGFPDMMSRCAEM 311 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIV-VGIDTWYDAETGKYHVNQYTGD 148 D + IN + + G+ + Y N Sbjct: 312 LCREMDDFDFLDINMGCPLEGLHKKGAGSALMTRLGKAEGVMSSMAKVCHAYDKNLTVKI 371 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH------ 201 + G +VL+ + D K R Sbjct: 372 RTAHYGQNHVYDKVAARAVSSGVDGVVLHGRTAQQRYSRPADWTFHTKCRTAMDSAVPGN 431 Query: 202 -VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 VPL+ G +E V+G + + E+K + Sbjct: 432 AVPLVGCGDIIDWREAIERMETPGVEGLMIGRGALIKPWIFTEIKEH 478 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 16/123 (13%) Query: 14 DGQVVKGVQ---FRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRV 69 VK +NH +A R G D +V + TA R D ++ ++ Sbjct: 365 KNLTVKIRTAHYGQNHVYD----KVAARAVSSGVDGVVLHGRTAQQRYSRPADWTFHTKC 420 Query: 70 AEVID-------IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFG 121 +D +P G I +A + + G + + I AL P + T + + Sbjct: 421 RTAMDSAVPGNAVPLVGCGDIIDWREAIERMETPGVEGLMIGRGALIKPWIFTEIKEHRD 480 Query: 122 VQC 124 Sbjct: 481 WDI 483 >UniRef50_B8P5W1 Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8P5W1_POSPM Length = 513 Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 57/175 (32%), Gaps = 10/175 (5%) Query: 74 DIPFCVAGGIKSLEDA---AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 D P V S E AK++ D + +N D + Sbjct: 92 DRPLIVQFCANSPEQLLKSAKVVEPYCDAVDVNLGCPQDIARRGHYGSFLQDE----WDL 147 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--- 187 + T +++ + R T +T+++ + +++ GA + + ++ + Sbjct: 148 IYELINTLHRNLSIPVTAKFRVFPTVEKTVEYAKMLERAGAQILTCHGRLREQRGHNTGL 207 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 D E+++ V+E +P+ A+G D ++A Sbjct: 208 ADWEKIRAVKEAVSIPVFANGNVLFHSDIERCLAATGADAIMSAEGNLYNPAIFS 262 Score = 77.8 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 32/93 (34%), Gaps = 4/93 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 +FR + V AK GA L + G D + V E + IP Sbjct: 166 KFRVFPTVEKTVEYAKMLERAGAQILTCHGRLREQRGHNTGLADWEKIRAVKEAVSIPVF 225 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADP 110 G + D + L+ GAD I L +P Sbjct: 226 ANGNVLFHSDIERCLAATGADAIMSAEGNLYNP 258 >UniRef50_C8X244 Dihydrouridine synthase DuS n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X244_DESRD Length = 328 Score = 83.6 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 49/213 (23%), Gaps = 13/213 (6%) Query: 38 RYAEEGA-----DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAK 91 E GA + + + ++ + + G + Sbjct: 35 LCRENGARVAHTEMISVKGL---IYNSQGTWDLLATAPADTPLVVQLFGADPDCFAQPVR 91 Query: 92 IL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 L G I +N+ + T + V Sbjct: 92 WLTERGFHWIDLNAGCPVRKVIKTGAGAALMEDPQRLVR--IMQTIGRAAPVQAGVKLRL 149 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGG 209 + L + + G I L+ G L ++ E VP++ASG Sbjct: 150 PADGSTDGLLRLRDTLARAGVSWITLHPRTARQGYGGLAQWSALSRMAESSPVPIVASGD 209 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + F VDG + A Sbjct: 210 LWNAQAARRCFEQTGVDGIMFARGALHNPRIFK 242 >UniRef50_C5D3D6 Indole-3-glycerol phosphate synthase n=10 Tax=Bacillaceae RepID=TRPC_GEOSW Length = 258 Score = 83.2 bits (204), Expect = 7e-15, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 57/226 (25%), Gaps = 34/226 (15%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 V +AK Y + GAD + G + ++S + + + +P I Sbjct: 58 RPDFHPVAIAKAYEKAGADAISVLTDERYFQG---HRGYLSDIKQAVQLPILRKDFIIDR 114 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + + GAD I + AL TL + + + + + Sbjct: 115 IQIEESVRIGADAILLIGEALPAKTLYELYQEAYDKGLECLVEVHQRETLENILDIFTP- 173 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPL 204 I +N + LE KV + Sbjct: 174 -------------------------EIIGINNRDLHTFVT--SLETTSKVIPFVPSGSVI 206 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 ++ G T + + D L ++ + Sbjct: 207 VSESGISTSHDL-KTVQTYGADAVLVGESLMRKDDVEAAIYELFRE 251 >UniRef50_B9PN28 tRNA-dihydrouridine synthase, putative n=3 Tax=Toxoplasma gondii RepID=B9PN28_TOXGO Length = 1220 Score = 83.2 bits (204), Expect = 7e-15, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 63/222 (28%), Gaps = 15/222 (6%) Query: 37 KRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE------ 87 + E GA E+ ++ + DG+ + S + R +AGG + E Sbjct: 836 RLCVELGA-EVTVSEMAVAKSIVDGKQSELSLLKRHKSETFFGVQIAGG--TPEVLNACT 892 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 D D I +N+ A + T V Sbjct: 893 DILASEDVSCDFIDLNAACPLVQLHRRFKAGACMLDHPKRLESLVESMTTRHPEVPVTVK 952 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH--VPL 204 + + + +++ + GA ++++ D + + RE PL Sbjct: 953 LRTANQGKKQVLHSFIRRLGDAGAAALIVHGRTAQQRYTKAADWSYVAQCREALDSSTPL 1012 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 I G + F DG + A + E+ Sbjct: 1013 IGCGDIFSSPEFEFRLASGASDGLMIARAALVKPWVFTEISE 1054 Score = 64.4 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 11/117 (9%) Query: 15 GQVVKGV---QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 VK Q + + +R + GA L+ + TA + D S+V++ Sbjct: 948 PVTVKLRTANQGKKQVLHS----FIRRLGDAGAAALIVHGRTAQQRYTKAADWSYVAQCR 1003 Query: 71 EVID--IPFCVAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADRFGVQC 124 E +D P G I S + L+ GA D + I AL P + T +++R Sbjct: 1004 EALDSSTPLIGCGDIFSSPEFEFRLASGASDGLMIARAALVKPWVFTEISERKVWDI 1060 >UniRef50_A9KL43 Indole-3-glycerol phosphate synthase n=20 Tax=cellular organisms RepID=TRPC_CLOPH Length = 271 Score = 83.2 bits (204), Expect = 9e-15, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 71/231 (30%), Gaps = 37/231 (16%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + + D V +AK Y E GA + G+ ++ V + + IP Sbjct: 74 KGMIAKDF-DPVFIAKEYEEGGAAAISVLTEPTFFLGKD---DYLMEVKKEVGIPVLRKD 129 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I + GAD + + L + Sbjct: 130 FILEAYQIYQAKLLGADCVLLIVSILTEE---------------------------QLTG 162 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE-QLKKVREVC 200 + + + + + + V + GA I +N N + +L+ + Sbjct: 163 FLKICDELGLSALVETHNQEEVMRALQCGARIIGVNNRNLSTFEVSIENSLKLRTLVPKE 222 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK---QIINIGELKAYL 248 + IA G T E E ++A V+G L K + + I LK+ L Sbjct: 223 AI-FIAESGISTPEQIKE-LKEAGVNGVLIGETLMKASNKKLMIRNLKSLL 271 >UniRef50_P41504 Probable tRNA-dihydrouridine synthase n=93 Tax=Alphaproteobacteria RepID=DUS_RHILP Length = 317 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 50/174 (28%), Gaps = 3/174 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 E A GAD I IN A + +A + Sbjct: 72 WMAEAAKIAADHGADIIDINMGCPAKKVIGGYSGSALMRDPDHALG--LIEATVKAVDIP 129 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 D + + G + ++ + G D + ++ VREV V Sbjct: 130 VTLKMRLGWDENSINAPDIARRAEASGIQLVTIHGRTRMQFYEGRADWDAIRAVREVISV 189 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 PLIA+G T E R + D + + + G L + +I Sbjct: 190 PLIANGDVETAHDAQEILRRSGADAVMIGRGCQGRPWHAGVLAGAAEPRREDIA 243 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 5/106 (4%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVS 67 +D+ +K + I +A+R G + + T D + Sbjct: 125 AVDI--PVTLKMRLGWDENSINAP-DIARRAEASGIQLVTIHGRTRMQFYEGRADWDAIR 181 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTL 112 V EVI +P G +++ DA +IL GAD + I P Sbjct: 182 AVREVISVPLIANGDVETAHDAQEILRRSGADAVMIGRGCQGRPWH 227 >UniRef50_Q2IG49 Dihydrouridine synthase TIM-barrel protein nifR3 n=4 Tax=Anaeromyxobacter RepID=Q2IG49_ANADE Length = 352 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 63/222 (28%), Gaps = 13/222 (5%) Query: 38 RYAEEGAD-----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAA 90 GA + + + G + S++ R + + A Sbjct: 28 ICRRMGASFAYTEMVSAHGL---MHGALQTSSYLDREPDEDPFAVQIFASEPDVLARGAV 84 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GA I +N + G V V + Sbjct: 85 VAVQAGAGMIDVNMACPVKKVCGSGAGAAMGRDPRKVEEAVRAIRAAVPVPVTV--KIRA 142 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGG 209 + +D + + GA + L+ + + +G E ++ V++ +P++ SG Sbjct: 143 GWDEGEVNCVDVARAAEAGGAAAVALHGRTRSQLYSGKARWELVRAVKQAVAIPVLGSGD 202 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 T + + D L A ELKA A + Sbjct: 203 VWTAGDAVRMREETGCDAVLVARGACGNPWIFRELKAIEAGR 244 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 3/107 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 V VK + + + V +A+ GA + + T S V V Sbjct: 132 VPVPVTVKIRAGWDEGEV-NCVDVARAAEAGGAAAVALHGRTRSQLYSGKARWELVRAVK 190 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRL 116 + + IP +G + + DA ++ G D + + A +P + L Sbjct: 191 QAVAIPVLGSGDVWTAGDAVRMREETGCDAVLVARGACGNPWIFREL 237 >UniRef50_B0S217 Nitrogen regulation protein n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=B0S217_FINM2 Length = 305 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 1/109 (0%) Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLK 194 + + Q ++ I L+ + +G D +K Sbjct: 124 CKNNTDLPVSVKFRLGIDENSMNYMQLAQICERLKVDYITLHARTRKMFYSGEADWLHIK 183 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +V E +P+ +G T E + ++ DG L A + + Sbjct: 184 RVVENVDIPVFGNGDCFTKEDIRKNMEYSNCDGVLLARGAMQNPFIFSD 232 Score = 72.8 bits (177), Expect = 9e-12, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 43/142 (30%), Gaps = 3/142 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVI 73 VK + + + + LA+ D + + T D + RV E + Sbjct: 131 PVSVKFRLGIDENSM-NYMQLAQICERLKVDYITLHARTRKMFYSGEADWLHIKRVVENV 189 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 DIP G + ED K + + D + + A+ +P + + ++ + I Sbjct: 190 DIPVFGNGDCFTKEDIRKNMEYSNCDGVLLARGAMQNPFIFSDDENKSKEEVIDTIKKHM 249 Query: 133 YDAETGKYHVNQYTGDESRTRV 154 + Sbjct: 250 QLKLEFYEERRAILEMRKHIQW 271 >UniRef50_A6DCX2 tRNA-dihydrouridine synthase B n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCX2_9PROT Length = 311 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 65/213 (30%), Gaps = 8/213 (3%) Query: 40 AEEGADEL--VFYDITASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFG 96 E G D + A + K + + ++ A +++ A +I++ Sbjct: 31 KEFGCDMTFSEMINANAIAFNNEKTKKMMQKSSKETPYFIQIAANNVENAIKAVEIINEI 90 Query: 97 --ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 D I IN + + + A Sbjct: 91 PWIDGIDINLGCPVNKARRSGYGGVLLKDENKEKLKEIVSAIIKTSKKIVSAKMRLG--Y 148 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTM 213 + +D + ++ G + ++ + G + +++KKV + ++P+IA+G Sbjct: 149 NEVVAVDRAKMLEDLGIKFLTVHGRTVKQMYKGNANYKEIKKVVKEVNIPVIANGDITDY 208 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + E + +G + E+K Sbjct: 209 KKAKEVLEYTEANGVAIGRGVIGKPWIFLEMKQ 241 Score = 79.0 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 53/158 (33%), Gaps = 7/158 (4%) Query: 4 KRIIPCLDVRDGQVV--KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV- 60 K I+ + ++V K N + V AK + G L + T + Sbjct: 126 KEIVSAIIKTSKKIVSAKMRLGYNEVV---AVDRAKMLEDLGIKFLTVHGRTVKQMYKGN 182 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADR 119 + + +V + ++IP G I + A ++L + A+ ++I + P + + + Sbjct: 183 ANYKEIKKVVKEVNIPVIANGDITDYKKAKEVLEYTEANGVAIGRGVIGKPWIFLEMKQQ 242 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 + + Y R + Q+ Sbjct: 243 GEITPYQKKEVILTHFKAMIEWYGDYGVILFRKHLHQY 280 >UniRef50_Q00XL7 TRNA-dihydrouridine synthase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00XL7_OSTTA Length = 295 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 10/82 (12%), Positives = 30/82 (36%), Gaps = 1/82 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 ++ GA I+++ ++ D + ++++ +P+I +G T + + Sbjct: 58 LENAGAAAIIVHGRTKEQRYTKSADYDVIRQIVSERAIPVIGNGDVLTWYDAQQRLDYSG 117 Query: 225 VDGALAASVFHKQIINIGELKA 246 G + + E + Sbjct: 118 CAGIMVGRGALIKPWIFKEFRE 139 Score = 80.1 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 42/143 (29%), Gaps = 4/143 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI 73 VK E +A+R GA ++ + T + D + ++ Sbjct: 36 PLTVKIRLGI--ESSSPATKIAERLENAGAAAIIVHGRTKEQRYTKSADYDVIRQIVSER 93 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 IP G + + DA + L + G I + AL P + ++ + Sbjct: 94 AIPVIGNGDVLTWYDAQQRLDYSGCAGIMVGRGALIKPWIFKEFREKKEWEPTAEDRVGR 153 Query: 133 YDAETGKYHVNQYTGDESRTRVT 155 A T + + Sbjct: 154 RSATTTGVSEDTTNSCPGIKAFS 176 >UniRef50_Q6C4K2 YALI0E26059p n=1 Tax=Yarrowia lipolytica RepID=Q6C4K2_YARLI Length = 359 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 6/176 (3%) Query: 71 EVIDIPFCVAGGIKSLED---AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 D P V G + ED A K+L D + IN + + +V Sbjct: 95 NKDDFPLIVQLGGNNAEDMVKAVKMLQPYVDGVGINCGCPIKEQIREGVGAALMTAPDLV 154 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRN 186 + + R +T+ + + V+ GA I ++ R Sbjct: 155 AEMVAAIRKECGAEIYVEVKM--RIHKDLNDTVHFAKLVEAAGADSISVHGRLVPQRSRT 212 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + + +K V++ VP+IA+G A T + E DG +AA Sbjct: 213 APNYDGIKIVKDSVDVPVIANGDAFTTTNIEEIVELTGCDGVMAARGILSNPAMFA 268 Score = 73.2 bits (178), Expect = 9e-12, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 5/133 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDIP 76 VK H+ + D V AK GAD + + R + + V + +D+P Sbjct: 173 VKMRI---HKDLNDTVHFAKLVEAAGADSISVHGRLVPQRSRTAPNYDGIKIVKDSVDVP 229 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + + +I+ G D + L++P + + Sbjct: 230 VIANGDAFTTTNIEEIVELTGCDGVMAARGILSNPAMFAGYTKTPWRAVELFWDYVTAYG 289 Query: 136 ETGKYHVNQYTGD 148 ++ ++ Sbjct: 290 LPYALTIHHFSEM 302 >UniRef50_D1CBJ4 Indole-3-glycerol-phosphate synthase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBJ4_THET1 Length = 270 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 32/241 (13%), Positives = 63/241 (26%), Gaps = 39/241 (16%) Query: 18 VKGV---QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVID 74 VK + + + D V +A+ Y A + G + V+ + Sbjct: 60 VKRRSPSKGDLNTTL-DPVWMARVYQNARASAISVLTDEKYFGGS---LDDLQSVSSQVG 115 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 IP I + + GAD I + AL L + Sbjct: 116 IPVLRKDFILDEYQVVESRANGADAILLIVRALTGDKLACLINAA--------------- 160 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--GYDLEQ 192 + + + + V GA I +N + + Sbjct: 161 ------------SELGMDALVEVHDEEDVDLALASGARLIGINNRDLESFHTTIEVTQRL 208 Query: 193 LKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +R+ V +I+ G + E+ + A D L +++ Sbjct: 209 APYIRDRTDSEVLVISESGIFSRSDV-ESVQAAGADAVLVGEALVVSGDPAKKIEELRGE 267 Query: 251 Q 251 + Sbjct: 268 R 268 >UniRef50_B8P3J2 Predicted protein (Fragment) n=3 Tax=Agaricomycetes RepID=B8P3J2_POSPM Length = 260 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 62/211 (29%), Gaps = 19/211 (9%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG 96 + + D L F+ G D+ V ++ AG K + Sbjct: 35 RLLNDH--DYLQFHLR---GLGEPNDRPVVVQLCGNDPELVVRAG---------KQVQSH 80 Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 D I N + Q ++ + + V + Sbjct: 81 CDAIDFNLGCPQEAARDAHYGAYLLGQNDWPLVENIAASMSNSLTVPVSAKLRLCQPASA 140 Query: 157 WETLDWVQEVQKRGAGEIVLNMMN---QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 TLD + ++ GA + L+ + + DLEQ+K +++ +P+I++G Sbjct: 141 --TLDLARRLEHAGASWVTLHARTVSVRRRRQGAADLEQIKTLKDNLSIPVISNGNVRVW 198 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGEL 244 E DG + ++ Sbjct: 199 EDVERNLALTGADGIMVGESLLANPCLFADI 229 Score = 66.3 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 4/94 (4%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDIT---ASSDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 + + LA+R GA + + T D + + + + IP G + Sbjct: 136 QPASATLDLARRLEHAGASWVTLHARTVSVRRRRQGAADLEQIKTLKDNLSIPVISNGNV 195 Query: 84 KSLEDAAKILSF-GADKISINSPALADPTLITRL 116 + ED + L+ GAD I + LA+P L + Sbjct: 196 RVWEDVERNLALTGADGIMVGESLLANPCLFADI 229 >UniRef50_Q30WR3 Dihydrouridine synthase family protein n=3 Tax=Deltaproteobacteria RepID=Q30WR3_DESDG Length = 376 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 18/171 (10%), Positives = 42/171 (24%), Gaps = 4/171 (2%) Query: 75 IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 + + + AA+ + G + IN P + Sbjct: 117 VCQLFGADPQDMAAAARRVESEGFFGVDINMGCSVAPIVKKGCGADLLRDPERAVRMVDA 176 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 V + + ++ + +Q GA +V + R Sbjct: 177 VRRA--VSVPVFVKMRTGWSPDPEPAVNLARRLQDAGADALVFHPRVAPDRRTHRPRTAH 234 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + V++ +P+I +G DG + + + Sbjct: 235 IGLVKDAVDIPVIGNGDVFDAADCAAMLERTGCDGVSLGRLAIARPWIFAQ 285 Score = 74.4 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 4/193 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVA 70 V VK V LA+R + GAD LVF+ A + + V Sbjct: 181 VSVPVFVKMRTGW-SPDPEPAVNLARRLQDAGADALVFHPRVAPDRRTHRPRTAHIGLVK 239 Query: 71 EVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + +DIP G + D A +L G D +S+ A+A P + + F + Sbjct: 240 DAVDIPVIGNGDVFDAADCAAMLERTGCDGVSLGRLAIARPWIFAQWTRGFVPEKQTYRD 299 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 + + + H + + ++ + ++ + G I + M + Sbjct: 300 TLFALMDALEAHYDPARAIKLYKKLIMYYAANFTFGNRLFG-RLIRGDDMQAMRRNAQAE 358 Query: 190 LEQLKKVREVCHV 202 ++ +V ++ Sbjct: 359 FCRVPQVGARPNL 371 >UniRef50_C6SB16 tRNA-dihydrouridine synthase B n=1 Tax=Neisseria meningitidis alpha153 RepID=C6SB16_NEIME Length = 207 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 10/118 (8%), Positives = 33/118 (27%), Gaps = 1/118 (0%) Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKV 196 + + + + G + ++ + + G E + + Sbjct: 1 MRQAYPLPSKPVWGWHDDHQNLPVIAKIAEDCGIAALAVHGRTRTQMYKGEARYELIAET 60 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + ++P+ +G + + + DG + + +LK Y + Sbjct: 61 KCRLNIPVWVNGDITSPQKAQAVLKQTAADGIMIGRGAQGRPWFFRDLKHYAEHGVLP 118 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 61/193 (31%), Gaps = 6/193 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K V + + V +AK + G L + T + + ++ ++IP Sbjct: 10 KPVWGWHDDHQNLPV-IAKIAEDCGIAALAVHGRTRTQMYKGEARYELIAETKCRLNIPV 68 Query: 78 CVAGGIKSLEDAAKIL----SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 V G I S + A +L + G + A+ + + + Sbjct: 69 WVNGDITSPQKAQAVLKQTAADGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECAA 128 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL 193 ++ + GD + R+ + ++ E+ +N ++ + L Sbjct: 129 AILNHIRAIHAFYGDSAGVRIARKHIGWYIDEMPDGEQTRREINRLDSAAAQYDTLAGYL 188 Query: 194 KKVREVCHVPLIA 206 +++ + A Sbjct: 189 ERLAGKTDIWACA 201 >UniRef50_A4IQ84 Indole-3-glycerol phosphate synthase n=7 Tax=Bacteria RepID=TRPC_GEOTN Length = 258 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 56/226 (24%), Gaps = 34/226 (15%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D V +AK Y GAD + G + ++ V E ++IP I Sbjct: 58 RPDFDPVAIAKAYERAGADAISVLTDERYFQG---HRRYLQEVKEAVNIPVLRKDFIIDR 114 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + GAD I + AL+ L + + + + + Sbjct: 115 RQVEESARLGADAILLIGEALSPEMLEALYQEAYSIGLECLVEVHAKETLERILARFTP- 173 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV--CHVPL 204 + +N + LE K + + + Sbjct: 174 -------------------------EVVGINNRDLHTFVT--TLEATKALASLIPPSSVI 206 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 ++ G + R V L +Q + Sbjct: 207 VSESGISSYRDV-RTIRSYGVQAMLVGESLMRQADVERAVYRLFGE 251 >UniRef50_Q9T0J6 tRNA-dihydrouridine synthase 3-like n=10 Tax=Magnoliophyta RepID=DUS3L_ARATH Length = 700 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 20/241 (8%), Positives = 72/241 (29%), Gaps = 14/241 (5%) Query: 19 KGVQFRNHEIIGDIVPLA------KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVA 70 K + FR+ + + + GAD T G+ + + + R + Sbjct: 341 KLIDFRDKLYLA-PLTTVGNLPFRRLCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHS 399 Query: 71 EVIDIPFCVAGGI-KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + G ++ +++ I+ ++ + + + + Sbjct: 400 SEDLFGVQICGSYPDTVSRVVELIDRECTVDFIDINMGCPIDMVVNKSAGSALLNKPLRM 459 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GY 188 + + + + + ++ GA + ++ ++ + Sbjct: 460 KNIVEVSSSIVETPITIKVRTAFFEGKNRIDSLIADIGNWGATAVTIHGRSRQQRYSKSA 519 Query: 189 DLEQLKKVREV--CHVPLIASGGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELK 245 D + + + + ++ +I +G + + + D ++ + A + E+K Sbjct: 520 DWDYIYQCTKNATTNLQVIGNGDVYSYLDWNKHKSDCPELSSCMIARGALIKPWIFTEIK 579 Query: 246 A 246 Sbjct: 580 E 580 >UniRef50_C0QPX6 Indole-3-glycerol phosphate synthase n=5 Tax=Aquificales RepID=C0QPX6_PERMH Length = 263 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 84/265 (31%), Gaps = 49/265 (18%) Query: 2 LAKRIIPCLDVRDGQVVKGV-------------QFRNHEIIGDIVPLAKRYAEEGADELV 48 ++KR P +D R KG + E D V +AK Y E GA + Sbjct: 30 ISKRKHPVIDFRSAFK-KGRINIIAEVKKASPSKGVIREDF-DPVKIAKIYEENGAAAIS 87 Query: 49 FYDITASSDGRVVDKSWVSRVAEV-IDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 +T + D ++ ++ E I+IP I + +FG+D + + L Sbjct: 88 V--LTDKEYFKG-DIQYIEQIKESGINIPVLRKDFIIDKRQIDEAFAFGSDTFLLIARVL 144 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + Y + + T + ++ Sbjct: 145 ENE---------------------------ELEDLINYGRSFGMEPLIEVHTKEECEKAV 177 Query: 168 KRGAGEIVLNMMNQDGVRNGYD--LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 G I +N + + + E ++E+ +IA G T + +E V Sbjct: 178 SSGGKIIGINNRDLKTFKVDINLSKELAPYLKELGADIVIAESGISTHDQIVELLGY-GV 236 Query: 226 DGALAASVFHKQIINIGELKAYLAT 250 DG L ++ +L+ L Sbjct: 237 DGFLIGESLMREEDIGKKLRKLLGD 261 >UniRef50_A1ALX2 Indole-3-glycerol phosphate synthase n=4 Tax=Desulfuromonadales RepID=A1ALX2_PELPD Length = 267 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 61/223 (27%), Gaps = 35/223 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y GA L GR ++R+ +D+P I Sbjct: 78 DPLEIARIYETNGATCLSVLTDQHFFMGR---LENLTRIRGEVDLPLLRKDFILDPFQIY 134 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD I + + L P +I + + ++ Sbjct: 135 EARCAGADAILLITAILELPQMIDYITLARDLSLDILL---------------------- 172 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV--CHVPLIASG 208 + + + I +N N DL ++ + L+A Sbjct: 173 -----EVHDERELDVALRTDCTLIGVNNRNLRTFTT--DLATTGRLASMLPPEHLLVAES 225 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 G T D L ++ +L+ L + Sbjct: 226 GISTRADIER-LAADGADAFLIGESLMRETDIGSQLRILLGNR 267 >UniRef50_Q9XVN8 Protein F36A2.2, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XVN8_CAEEL Length = 527 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 23/224 (10%), Positives = 64/224 (28%), Gaps = 16/224 (7%) Query: 40 AEEGAD-----ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 + GA + + R + V ++ A + + A +++ Sbjct: 93 RKYGAQLTFTPMIHAHLFVNDGTYRRNSLALVKADRPLV--VQFCANKVDTFLAACRLVE 150 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 D + +N R + ++ + + ++ + Sbjct: 151 DVCDGVDLNLGCPQMVAKRGRYGSWLQDEVDLICEMVSAVRDYCRLPISCKIRVRDDRQQ 210 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCH--VPLIASGG 209 T + + GA + ++ +D D +++ V E VP++A+G Sbjct: 211 TVEY----AKRLVDAGATMLTVHGRTRDMKGAETGLADWSRIRDVVEAVGSRVPVMANGN 266 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + ++A + + A++ T + Sbjct: 267 IQFPGDVERCMQATGAVAIMSAEGLLYNPLIFDDANAHVDTWKI 310 Score = 66.3 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 6/109 (5%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVID--IP 76 + R + V AKR + GA L + T G + D S + V E + +P Sbjct: 201 KIRVRDDRQQTVEYAKRLVDAGATMLTVHGRTRDMKGAETGLADWSRIRDVVEAVGSRVP 260 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQC 124 G I+ D + + GA I L +P + Sbjct: 261 VMANGNIQFPGDVERCMQATGAVAIMSAEGLLYNPLIFDDANAHVDTWK 309 >UniRef50_A7I0T0 NifR3 family protein n=9 Tax=Epsilonproteobacteria RepID=A7I0T0_CAMHC Length = 310 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 60/213 (28%), Gaps = 10/213 (4%) Query: 40 AEEGADELV--FYDITASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSF- 95 G D V A + + K ++ A +IL+ Sbjct: 27 KRFGCDATVSEMISANALVFCSEKSLKMIKKSENETPYFVQIAGSDPKIIKQAVEILNKI 86 Query: 96 -GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 G D I +N + ++ K +YT + R Sbjct: 87 DGIDGIDLNCGCPVPKVVRQNAGSALLQNLDLLS---KLIEIIKKTSNKKYTSAKVRLGF 143 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTM 213 ++ VQ GA I ++ + G + D E + + +PLIA+G + Sbjct: 144 DTKNPVNIALAVQNAGADFIAMHARTRAGGYSAKPDYEAIAAAKSAVKIPLIANGNINS- 202 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 ++ + D + E+K Sbjct: 203 QNANQILNLTKADALMIGRATIGNPWVFYEIKN 235 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 51/175 (29%), Gaps = 6/175 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + + + V +A GAD + + T + D ++ + IP Sbjct: 138 KVRLGFDTK---NPVNIALAVQNAGADFIAMHARTRAGGYSAKPDYEAIAAAKSAVKIPL 194 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I S ++A +IL+ AD + I + +P + + ++ V A Sbjct: 195 IANGNINS-QNANQILNLTKADALMIGRATIGNPWVFYEIKNQKTVAVDEKIKKEIILAH 253 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 + R E + + + + E Sbjct: 254 FDEMIKFYGDHGAVIFRKHLHEYSKGYADATNFRCEINTITNAEKMRDKIKQFFE 308 >UniRef50_Q9FH91 Gb|AAF51525.1 n=7 Tax=Viridiplantae RepID=Q9FH91_ARATH Length = 423 Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 69/226 (30%), Gaps = 14/226 (6%) Query: 38 RYAEEGADELV---FYDITASSDGRVVDKSWVSRVAEVIDIPFCVA-GGIKSLEDAAKIL 93 + GA + + + ++ + + E + +L +AAK + Sbjct: 106 LCQKYGAQAAYTPMLHSRIFTETEKYRNQEF-TTCKEDRPLFVQFCANDPDTLLEAAKRV 164 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 D + IN +V A+ V + R Sbjct: 165 EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAQNLNVPV----SCKIRIF 220 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN---GYDLEQLKKVREVCHVPLIASGGA 210 +TL + + ++ G + ++ +D D +K+V+ +P++A+G Sbjct: 221 PNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWSAIKEVKNAMRIPVLANGNV 280 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIG--ELKAYLATQGVE 254 +E ++ V+G L+A + + E Sbjct: 281 RCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFRTAEWAKDNEEE 326 Score = 74.4 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 7/100 (7%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRV--VDKSWVSRVAE 71 K F + D + AK + G L + T DG+ D S + V Sbjct: 212 PVSCKIRIF---PNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWSAIKEVKN 268 Query: 72 VIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADP 110 + IP G ++ +ED + G + + L +P Sbjct: 269 AMRIPVLANGNVRCIEDVDNCIKETGVEGVLSAETLLENP 308 >UniRef50_D2RIC4 Geranylgeranylglyceryl phosphate synthase n=2 Tax=Euryarchaeota RepID=D2RIC4_ARCPR Length = 262 Score = 82.1 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 70/227 (30%), Gaps = 9/227 (3%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVA-GGI 83 +++ + D V A+R E GAD + + G +D V + + +DIP + G I Sbjct: 28 DYKSLDDAVETARRVYEGGADVI-LVGGSIGVQGEPLDY-VVREIKKSVDIPVVLFPGNI 85 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 + + +NS T A + + Y V Sbjct: 86 GT---ITRYADALYFMSLLNSRNPYWITRAQMQAAHLIKTLGLEPLPVGYIVVEPGGTVG 142 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 + R + Q G I + + LE +++V +P Sbjct: 143 YVGEADLIPRNRPKLASAYALAGQFMGFRFI-VTDAGSNPKEGHIPLEMVREVANSISIP 201 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + +GG E + D + F + +K+++ Sbjct: 202 YVVAGGVRRPEEAEKIIE-CGADAVQVGTAFEIDNA-VERVKSFVKA 246 >UniRef50_Q09504 Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2 n=2 Tax=Chromadorea RepID=YQI2_CAEEL Length = 284 Score = 82.1 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 1/168 (0%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I L +AA+++ + + +N + ++ Sbjct: 52 IVQFATDDPFVLSEAAEMVYKCSTGVDLNCGCPKHDVRSKGFGSALLSKPELLADMVRQT 111 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + + R +T+D ++ + G + ++ D++ L+ Sbjct: 112 RARIPDP-DFSVSLKIRINHDIEKTVDLCRKAEAAGVTHLTVHGRTPSQRAEPIDIQALR 170 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 V++ VP+IA+GG T E L VDG +AA+ Sbjct: 171 IVKDSVSVPIIANGGITTREEALFLAEQTGVDGIMAANGLLDNPALFA 218 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 1/128 (0%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + R + I V L ++ G L + T S +D + V + + +P G Sbjct: 125 KIRINHDIEKTVDLCRKAEAAGVTHLTVHGRTPSQRAEPIDIQALRIVKDSVSVPIIANG 184 Query: 82 GIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 GI + E+A + G D I + L +P L + Sbjct: 185 GITTREEALFLAEQTGVDGIMAANGLLDNPALFAGHEHTPSDCVENFMRLSREYGLDWLL 244 Query: 141 HVNQYTGD 148 + Sbjct: 245 YHQHLQYM 252 >UniRef50_UPI00006A5AE6 PREDICTED: similar to PP3111 protein n=1 Tax=Ciona intestinalis RepID=UPI00006A5AE6 Length = 474 Score = 82.1 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 4/171 (2%) Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 D P V + K D L P I + +G Sbjct: 73 DRPLIVQFCANDPDILTKSALLAQDHCDAVDINLGCPQTIAK-RGNYGAFLGENWELVTK 131 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDL 190 + ++ + R +T+ + + +++ G + ++ ++ Sbjct: 132 LIKACHEKLSVPVTCKIRIFTDVEKTVQYAKMIERAGCQLLTVHGRTKEMKGPMTGLASW 191 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 E +K V++ +P+ A+G VDG + A Sbjct: 192 EHIKAVKDAVKIPVFANGNIQYKADVDRCINQTGVDGVMIAEGNLHDPCLF 242 Score = 80.1 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 36/144 (25%), Gaps = 7/144 (4%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSR 68 + K F + V AK G L + T G + + Sbjct: 140 LSVPVTCKIRIF---TDVEKTVQYAKMIERAGCQLLTVHGRTKEMKGPMTGLASWEHIKA 196 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVV 127 V + + IP G I+ D + ++ G D + I L DP L + Sbjct: 197 VKDAVKIPVFANGNIQYKADVDRCINQTGVDGVMIAEGNLHDPCLFVGKKTIIWEIALEY 256 Query: 128 GIDTWYDAETGKYHVNQYTGDESR 151 Y Sbjct: 257 LQCAVKYPCPASYARGHVFKICHH 280 >UniRef50_A3JG66 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=A3JG66_9ALTE Length = 335 Score = 82.1 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 55/166 (33%), Gaps = 2/166 (1%) Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 AK GA ++ IN A + + ++ T + + Sbjct: 82 AKAAELGATQVDINFGCPAKTVNKHKGGCVLMREPELMHEITAAVRQAVPADILVTAKMR 141 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASG 208 + + Q + GAGEIV++ ++ E++ K RE +IA+G Sbjct: 142 LG-YDDRSMGVACAQALDAAGAGEIVIHARSKTDGYKPPAYWEEIAKAREAVKAKVIANG 200 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 T+ + + D + + +++A + +E Sbjct: 201 DIFTVADYWRCREVSGCDDVMIGRGLVARPDLARQIRASQRGESIE 246 Score = 63.6 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 49/163 (30%), Gaps = 4/163 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + +G V A+ GA E+V + + + + +++ E + Sbjct: 139 KMRLGYDDRSMG--VACAQALDAAGAGEIVIHARSKTDGYKPPAYWEEIAKAREAVKAKV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I ++ D + G D + I +A P L ++ + I + A Sbjct: 197 IANGDIFTVADYWRCREVSGCDDVMIGRGLVARPDLARQIRASQRGESIELMTWPEALAL 256 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 +Y E + + + A + Sbjct: 257 VQEYGYALQGWLEDKYVTGRIKQWMNYLRQGFSEAEALWPQAR 299 >UniRef50_C4ZG69 APG10 (Albino and pale green 10); 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imid azole-4-carboxamide isomerase n=3 Tax=cellular organisms RepID=C4ZG69_EUBR3 Length = 261 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 87/267 (32%), Gaps = 23/267 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP-----------LAKRYAEEGADELVFYDI 52 PC+D+ +G+ VK + + + GD A Y + G + Sbjct: 1 MEFRPCIDIHNGK-VKQIVGGSLKDRGDFASENFVSEQDSRFYADMYRKSGIKGGHIILL 59 Query: 53 TA--SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 + S + V + E V GGI + ++A + + GA + + S D Sbjct: 60 NSVDSEYYEDTKEQAVMAL-EAYPQGLQVGGGI-TADNAMEFIDAGAAAVIVTSYVFKD- 116 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 A+ ++ V D K Y + T + + Sbjct: 117 -GRINYANLNRLKDTVGSDRLVLDLSCRKKDGQYYIVTDRWQNFTDEAVTTELLDKLSSY 175 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG--A 228 E +++ ++ +G NG + E + + +P+ +GG + + + R + Sbjct: 176 CCEFLVHAVDVEGRVNGIEKELVAMLGSWGRIPVTYAGGVSSFDDL-KCIRQLGQNHLNV 234 Query: 229 LAASV--FHKQIINIGELKAYLATQGV 253 S + ++ A+ + + Sbjct: 235 TIGSALDLFGGEMEYDKVIAFCNNKEI 261 >UniRef50_P33371 tRNA-dihydrouridine synthase C n=160 Tax=Gammaproteobacteria RepID=DUSC_ECOLI Length = 315 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 22/178 (12%), Positives = 59/178 (33%), Gaps = 7/178 (3%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+AA+ + G+ + +N + + ++ E H+ Sbjct: 78 AENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVS 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--GYDLEQLKKVREVCHVP 203 + + + VQ+ GA E+V++ ++ D + + +R+ ++P Sbjct: 138 VKVRLGWD-SGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIP 196 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ---GVEIRIC 258 +IA+G + + + D + N+ + Y + + + Sbjct: 197 VIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-NLSRVVKYNEPRMPWPEVVALL 253 Score = 72.4 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 5/115 (4%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEV 72 VK + +A + GA ELV + T R +D + + + Sbjct: 135 PVSVKVRLGWD--SGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQR 192 Query: 73 IDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIV 126 ++IP G I + A + ++ G D + I AL P L + Sbjct: 193 LNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYNEPRMPWP 247 >UniRef50_Q21L63 Dihydrouridine synthase, DuS n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21L63_SACD2 Length = 318 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 49/162 (30%), Gaps = 2/162 (1%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GA I +N A + + V + Sbjct: 91 ELGAVAIDLNFGCPAKTVNRHKGGACLLDETDTVFDIVNAVRKATPASTPVTAKIRLG-Y 149 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGT 212 + + L + ++ GA E+ ++ ++ + +R+ +P++A+G + Sbjct: 150 LNRDSYLRNAKAIEAAGANELCVHARSKTDGYQPPAYWHYIGDIRDNLSIPVVANGEIWS 209 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +E F + + + E+K Y+A + Sbjct: 210 LEDFKRCAEQSKCSDFMLGRGLLAKPDLALEIKQYMAGEAFN 251 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 44/159 (27%), Gaps = 4/159 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVIDIPF 77 K + + AK GA+EL + + + ++ + + + IP Sbjct: 144 KIRLGYLNRDS--YLRNAKAIEAAGANELCVHARSKTDGYQPPAYWHYIGDIRDNLSIPV 201 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I SLED + + LA P L + + A Sbjct: 202 VANGEIWSLEDFKRCAEQSKCSDFMLGRGLLAKPDLALEIKQYMAGEAFNPLSWDEVCAH 261 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + + + + + Q A E+ Sbjct: 262 VRTLFERNCQSYPPKYLGNRVKQWLFYLQRQYSEAAELF 300 >UniRef50_A5WG83 TIM-barrel protein, yjbN family n=2 Tax=Moraxellaceae RepID=A5WG83_PSYWF Length = 348 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 20/205 (9%), Positives = 56/205 (27%), Gaps = 14/205 (6%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAG-GIKSLED-AAKILSFGADKISINSPALADPTLITRL 116 + + + + G I + A + G ++++IN +D ++ Sbjct: 61 QGKTDRLLRYDTLEHPLVLQLGGADISEMTQCAVEAQKRGFNEVNINVGCPSDRVQHNKI 120 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + V V + D+V + G ++ Sbjct: 121 GACLMAEPDTVAALVRNMQAHVDIPVTVKHRIGIDEHDSYEFMQDFVSASAEAGCQRFIV 180 Query: 177 NMMNQDGVRNGYD---------LEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVD 226 + E + ++++ + + +GG ++E + VD Sbjct: 181 HARIAWLNGLSPKENREIPPLRYEDVYRLKQAFPELHIEINGGIDSIEQIKAHLQQ--VD 238 Query: 227 GALAASVFHKQIINIGELKAYLATQ 251 G + + + E ++ Sbjct: 239 GVMIGRAAYHNPYILAEAMSFWGEA 263 Score = 51.3 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 39/122 (31%), Gaps = 14/122 (11%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------R 59 +D+ VK + + + AE G + + A +G Sbjct: 142 VDI--PVTVKHRIGIDEHDSYEFMQDFVSASAEAGCQRFIVHARIAWLNGLSPKENREIP 199 Query: 60 VVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + V R+ + + + GGI S+E L D + I A +P ++ Sbjct: 200 PLRYEDVYRLKQAFPELHIEINGGIDSIEQIKAHLQQ-VDGVMIGRAAYHNPYILAEAMS 258 Query: 119 RF 120 + Sbjct: 259 FW 260 >UniRef50_B5IUS4 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Thermococcus barophilus MP RepID=B5IUS4_9EURY Length = 253 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 67/226 (29%), Gaps = 8/226 (3%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 + + +A+ E G D ++ T + V V + E +P + G Sbjct: 29 DDVSPEEASKIAQMCEEVGVDAVMVGGSTGAE--GEVLDEVVKAIKESSSLPVILFPG-- 84 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 S K +NS T L + + I Y V Sbjct: 85 SHGGITKYADAIFFMSLLNSRNPFFITGAQALGAFTVKRYRIEPIPMAYLIIEPGETVGW 144 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 + R + Q G + L + + ++ V+ V VPL Sbjct: 145 VGDAKPIPRHKPKIAAAYALAGQYLGMRLVYLEAGSGAP--EHVPNDMIRAVKSVIDVPL 202 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 I GG T E E + D + + ++ ++ E + L + Sbjct: 203 IVGGGIRTYEDAREV-AQSGADIIVTGTAI-EKAGSLEEARKRLES 246 >UniRef50_Q7UKJ7 Indole-3-glycerol phosphate synthase n=5 Tax=Bacteria RepID=TRPC_RHOBA Length = 259 Score = 81.7 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 60/224 (26%), Gaps = 39/224 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D +AK Y + GA + G ++ +V +D+P I Sbjct: 71 DPPTIAKSYEDGGAACISVLTDEPFFQGS---LDYLRQVRSAVDLPILRKDFIVDPYQLL 127 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD + + + L + +++ + Sbjct: 128 QARVAGADAVLLIAECL---------------------------SPQQLIEMDEQASELG 160 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP----LIA 206 + + + + V + +N + + VR +P ++ Sbjct: 161 LQTLIELYEPENLAPVLATKTRLVGINNRDLRTFET----DLQHCVRLAADIPSDRLVVG 216 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G T + + L +Q KA LA+ Sbjct: 217 ESGIRTAADV-AMLKAGGIKAILVGESLMRQPDITIATKALLAS 259 >UniRef50_B2JX56 Histidine biosynthesis protein n=6 Tax=Burkholderia RepID=B2JX56_BURP8 Length = 264 Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 66/259 (25%), Gaps = 17/259 (6%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAE-EGADELVFYDIT 53 ++IP LD+ DG V+ ++ + +A+ A L D+ Sbjct: 1 MQVIPVLDLLDGHAVRAIRGDRANYRPIQSSLCTTSQPLDVARALIATTAACALYVADL- 59 Query: 54 ASSDGRVVDKSWVSRVA----EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 + D S ++ +A + + G L A + A Sbjct: 60 GAIMSGNADPSTLAALATSSDRSRPLEIWLDAGFADFPSMLAHLERIACAPNAAPKQAAP 119 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + + D ++ L Sbjct: 120 EQAAPGARIVPVFGSESLRSLDALREADAAGYAPILSLDHRHGQLIAAPELADALRSPAS 179 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGGAGTMEHFLEAFRDADVDGA 228 +++ ++Q G G + + V + I +GG A R + Sbjct: 180 WPSRVIVMTLDQVGSDAGPNCDTFHHVHAQAGQRMTIGAGGIRHRGDLDAAAR-SGAHAW 238 Query: 229 LAASVFHKQIINIGELKAY 247 L AS H + Sbjct: 239 LVASALHDGKLEPAAATRA 257 >UniRef50_B8HVG9 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamideisomerase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HVG9_CYAP4 Length = 226 Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 80/217 (36%), Gaps = 17/217 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 IIP L + +G Q + D V +A+++A +GA L D + G +++ Sbjct: 1 MEIIPALKIMEGFCCHHRQ--PYRFNCDPVAMAEQWANQGATRLHLIDCNGVTTGAMLNL 58 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 ++ + + + +P V G I S + + G D++ ++ Sbjct: 59 PTIAAIVQQVKVPVQVEGTIYSRAQIETLFAIGVDRVVVDGSI---------GWSELVAD 109 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 +G+ + T + + GA I+ + + G Sbjct: 110 LCEHFSGKIMVNLEAYDGRVACSGELTGLLATTL-----AERAEAVGAAGIIYTDIARQG 164 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 +L+ LK + + ++P+IA GGA ++ L F Sbjct: 165 SGI-INLKALKHLADRVNLPIIAGGGASSIAELLRLF 200 >UniRef50_D1AII6 Dihydrouridine synthase DuS n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AII6_SEBTE Length = 309 Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 66/203 (32%), Gaps = 3/203 (1%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 D+ A + + R A + LE ++ G D I IN Sbjct: 32 MVDVNALKYSNQRTQDEILRKAGNEAVQIFGNKNEDFLEAVKLLIERGFDHIDINLGCPV 91 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + ++ V + + + + + +V+ ++ Sbjct: 92 KKIIRAGKGSALLLESDFVKELLLKLKKEFRNDIKLSMKIRTG-YKNFSDPEYYVKLAEE 150 Query: 169 RGAGEIVLNMMNQDGVRNG-YDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVD 226 G +I ++ Q+ + +G D +KK++ + +V +I +G ++ E A D Sbjct: 151 YGLFQICIHGRTQEQLYSGQADWNIIKKMKQKHKNVKIIGNGDLTDLKTIKEKTDSAKPD 210 Query: 227 GALAASVFHKQIINIGELKAYLA 249 G + A + E K Y Sbjct: 211 GIMLARGLLGNPWLLKEAKDYFK 233 Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 18/159 (11%), Positives = 44/159 (27%), Gaps = 7/159 (4%) Query: 11 DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRV 69 D++ +K ++ D K E G ++ + T D + + ++ Sbjct: 124 DIK--LSMKIRTG--YKNFSDPEYYVKLAEEYGLFQICIHGRTQEQLYSGQADWNIIKKM 179 Query: 70 AEVID-IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVV 127 + + G + L+ + D I + L +P L+ D F Sbjct: 180 KQKHKNVKIIGNGDLTDLKTIKEKTDSAKPDGIMLARGLLGNPWLLKEAKDYFKTGVFHE 239 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + + Y ++ + + Sbjct: 240 SEVGREEIKNTLIKHINYCIEDKGEIRANLDMRKHIFWY 278 >UniRef50_A9BIR6 Dihydrouridine synthase DuS n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIR6_PETMO Length = 301 Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 6/176 (3%) Query: 70 AEVIDIPFCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 +I + G + +AAK + A I IN+ + + ++G Sbjct: 55 KGEDNIGVQLFGNETTKFIEAAKSIQHLASWIDINAACPVNKVVKKGSGAALLKNPKLLG 114 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 + ++ V G + R Q + + V+K GA I+++ + + +G Sbjct: 115 DIVFNLKKSIDLPV----GVKVRLGYDQINIEEVAETVEKAGADYIIVHGRTRSQMYSGI 170 Query: 189 -DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + E LKK++ +PL ASG + + + + D L A + Sbjct: 171 ANREILKKLKAKITIPLGASGDVFSKKDIDDYLLNYGADFVLVARGAIGNPWIFTK 226 Score = 77.1 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 7/109 (6%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVS 67 +D+ G VK + I +A+ + GAD ++ + T S ++ + Sbjct: 123 SIDLPVG--VKVRLGYDQINIE---EVAETVEKAGADYIIVHGRTRSQMYSGIANREILK 177 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITR 115 ++ I IP +G + S +D L++GAD + + A+ +P + T+ Sbjct: 178 KLKAKITIPLGASGDVFSKKDIDDYLLNYGADFVLVARGAIGNPWIFTK 226 >UniRef50_Q8SUV4 Putative uncharacterized protein ECU07_1610 n=1 Tax=Encephalitozoon cuniculi RepID=Q8SUV4_ENCCU Length = 341 Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats. Identities = 24/211 (11%), Positives = 59/211 (27%), Gaps = 8/211 (3%) Query: 37 KRYAEEGADELV---FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + GA+ + + G D P V S E + Sbjct: 28 RLSKRHGANIFYTEMVHC-DSFLRGSRNPVKNRWYTTSEGDRPLVVQICGNSPEVMLEAA 86 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 D P + R +G T + +N + R Sbjct: 87 LIIQDHCDAIDVNFGCPQKVAR-KGGYGAYLQENWKLTGEIVKVLSSGLNVPVFCKIRVF 145 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLIASGGA 210 + +T+++ + +++ G + ++ +D + ++ ++E +P++++G Sbjct: 146 GSIEKTVEYAKMIEEAGCSLLAVHGRTRDQRGAAMGFASWKHIRAIKENLRIPVLSNGNI 205 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINI 241 T DG + + Sbjct: 206 MTHHDVWRCLEYTGCDGVMVGEAHLHNPLIF 236 Score = 74.0 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 36/139 (25%), Gaps = 7/139 (5%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAE 71 K F I V AK E G L + T G + + E Sbjct: 137 PVFCKIRVF---GSIEKTVEYAKMIEEAGCSLLAVHGRTRDQRGAAMGFASWKHIRAIKE 193 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + IP G I + D + L + G D + + L +P + T Sbjct: 194 NLRIPVLSNGNIMTHHDVWRCLEYTGCDGVMVGEAHLHNPLIFTGEDRSCLEIIGEYLDI 253 Query: 131 TWYDAETGKYHVNQYTGDE 149 + + Sbjct: 254 CMEFPGSADVRHIKSHMFR 272 >UniRef50_A4BCJ5 NifR3/Smm1 family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCJ5_9GAMM Length = 314 Score = 80.9 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 21/202 (10%), Positives = 51/202 (25%), Gaps = 16/202 (7%) Query: 44 ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISIN 103 EL T + G V + + + E+A + + G+ + +N Sbjct: 50 VPELHQQGRTGA--GTPVRVQLLGSHPQAL------------AENALRAIELGSHGLDLN 95 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 + ++ + + + Sbjct: 96 FGCPSKTVNASKGGAVLLTEPESIYAVVRSVRDALPGDQTLSAKMRLGFEDNSLMWEC-A 154 Query: 164 QEVQKRGAGEIVLNMMNQDGVRNGYDLEQL-KKVREVCHVPLIASGGAGTMEHFLEAFRD 222 ++ GA EI+++ + L +P+I +G T A + Sbjct: 155 HAIRDGGANEIIVHARTKQQGYTPPAYWHLPADFEARLGIPMIINGEIWTPADAGRAQHE 214 Query: 223 ADVDGALAASVFHKQIINIGEL 244 A+ + + E+ Sbjct: 215 ANCSSIMLGRGAVRNPWLASEI 236 Score = 63.2 bits (152), Expect = 8e-09, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 37/143 (25%), Gaps = 4/143 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + A + GA+E++ + T + + IP Sbjct: 139 KMRLGFEDNSL--MWECAHAIRDGGANEIIVHARTKQQGYTPPAYWHLPADFEARLGIPM 196 Query: 78 CVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 + G I + DA I + A+ +P L + + R + + Sbjct: 197 IINGEIWTPADAGRAQHEANCSSIMLGRGAVRNPWLASEITGRHNQKSDWSQVHQLVVQF 256 Query: 137 TGKYHVNQYTGDESRTRVTQWET 159 + + Sbjct: 257 WQEVTQQMSPRYCAGRLKQWLNH 279 >UniRef50_C1EEA5 Dihydrouridine synthase n=1 Tax=Micromonas sp. RCC299 RepID=C1EEA5_9CHLO Length = 465 Score = 80.9 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 53/172 (30%), Gaps = 3/172 (1%) Query: 86 LEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 LE A+ L+ GA ++ +N A+ V T A Sbjct: 146 LERCARFLAHQGGAPRVDLNCGCPANVVTGKGAGSSLLRDPRDVEAMTRAVARGVAGTGC 205 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 T + + + Q GA + L+ + +G E + ++ V Sbjct: 206 AVTVKLRSGFDDRGLLRENLLAAQAGGASFVTLHPRTRAQGYSGHAAWEDIGFAVDLLSV 265 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 P++ +G + + RD G + + + +A L+ + Sbjct: 266 PVVGNGDVTSAALASKMLRDTGCAGVMIGRGAVQDPLVFRRCRAALSDENFR 317 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 4/110 (3%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVID 74 VK + + GA + + T + + +++ Sbjct: 207 VTVKLRSGFDDRGLLR--ENLLAAQAGGASFVTLHPRTRAQGYSGHAAWEDIGFAVDLLS 264 Query: 75 IPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQ 123 +P G + S A+K+L G + I A+ DP + R + Sbjct: 265 VPVVGNGDVTSAALASKMLRDTGCAGVMIGRGAVQDPLVFRRCRAALSDE 314 >UniRef50_A4EC62 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4EC62_9ACTN Length = 347 Score = 80.9 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 63/232 (27%), Gaps = 19/232 (8%) Query: 38 RYAEEGA-----DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 GA + + + V E I + G E A Sbjct: 35 MCRRRGANLAYSEMVSVAGLA---YASNKTWRLVLPADEEQQICVQLFG--SKPEQFASA 89 Query: 93 LSFGADKISINSPALADPTLITRLADRFGV------QCIVVGIDTWYDAETGKYHVNQYT 146 ++ ++ + +L D + + +A G HV Sbjct: 90 VAA-VEERVGDRLSLIDINMACPARKVVTKGEGSALMRTPDLAEKIVEAAVGAAHVPVTV 148 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLI 205 + Q ++ GA + ++ + G D + +V + +P+I Sbjct: 149 KIRKGFYAEDRNAATFAQMLEGAGAAAVAVHGRCATQLYTGQADWSVVDEVADAVEIPVI 208 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA-YLATQGVEIR 256 SG + E E + + A + G+ +A L V R Sbjct: 209 GSGDVFSAEDAAEHLQGSGASAVFIARGIYGNPWVFGDARALALDGTPVPSR 260 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 3/106 (2%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAE 71 VK + E + A+ GA + + A+ D S V VA+ Sbjct: 143 HVPVTVKIRKGFYAED-RNAATFAQMLEGAGAAAVAVHGRCATQLYTGQADWSVVDEVAD 201 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 ++IP +G + S EDAA+ L GA + I +P + Sbjct: 202 AVEIPVIGSGDVFSAEDAAEHLQGSGASAVFIARGIYGNPWVFGDA 247 >UniRef50_B8EIK2 Histidine biosynthesis protein n=2 Tax=Beijerinckiaceae RepID=B8EIK2_METSB Length = 237 Score = 80.9 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 74/262 (28%), Gaps = 38/262 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP------------LAKRYAEEGADELVFYD 51 +IP +D++DG VV+ R + +A + + D Sbjct: 1 MEVIPVIDLKDGAVVRARLGRREFYA--PIESRLAATSAPGDIVAGLLSLHPFATIYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + D R + + + E + G L Sbjct: 59 LN-AIDARGDHEDVLFSLEEAFP-------------QVEFWVDAGVKDAGEARSWLLRHK 104 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + + + + + Q Sbjct: 105 RAILVLGTETLGSSATLEILKDEERIILSLDFRGETFIG---------PEALLSAQHIWP 155 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 ++ + + G G DL ++ V+ + + A+GG E A A VDGAL A Sbjct: 156 SRVIAMTLGRIGANAGPDLSRIASVKALSDRKVYAAGGVRGTEDL-AALDRAGVDGALVA 214 Query: 232 SVFHKQIINIGELKAYLATQGV 253 S H + EL A + +G+ Sbjct: 215 SALHDGQLTSQELAAPIMAKGI 236 >UniRef50_A5UNR3 ProFAR isomerase-related protein n=3 Tax=Methanobrevibacter smithii RepID=A5UNR3_METS3 Length = 229 Score = 80.9 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 90/247 (36%), Gaps = 32/247 (12%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGADELVFYD 51 M+ K +P LD++D V G + V +A + GADEL D Sbjct: 1 MIKK--VPVLDLKDNIAVSGKSGLRDTYTPLQTVFAPSANPVDIANGLSINGADELYIAD 58 Query: 52 ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + +G + V V +P + G+K E L + A KI + + + Sbjct: 59 LD-LIEGNGHNIHDVKMV--NSILPVMLDAGVKDFESFTFFLDY-AYKIIVPTETIKSIG 114 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 I ++ +++ + IVV +D + K ++ + +++ Sbjct: 115 EIKKIFEKYPKERIVVSVDVKDNELYSKNL--------------NISLAEFKEILEELDP 160 Query: 172 GEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 EI+L + G + GY+ E L +++ LI +GG + D + L Sbjct: 161 DEIILLDITGVGTQKGYNQELLDDFKDLKD-KLIIAGGLNNKS--VSELEDMGIKKVLVG 217 Query: 232 SVFHKQI 238 + H Sbjct: 218 TALHSGE 224 >UniRef50_Q4P1U2 tRNA-dihydrouridine synthase 3 n=4 Tax=Eukaryota RepID=DUS3_USTMA Length = 867 Score = 80.9 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 48/218 (22%), Gaps = 27/218 (12%) Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-----LEDAAKILSFGADKISINSPALAD 109 G + S V R + GG E + G D + IN D Sbjct: 527 FLHGNAAEWSLVRRHESERIFGTQLCGGKPDLLVPVAEALKAEVGDGLDFVDINCGCPID 586 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + T Q + + + Sbjct: 587 LVFNKGAGSALLDHPTK-LSKIVRGMNAVLGDTPLTIKLRTGTGAKQTTHKIFAKAQTEW 645 Query: 170 GAGEIVLNMMNQDGVRN-GYDLEQLKKVR--------------------EVCHVPLIASG 208 L+ ++ D + E+ +P+ +G Sbjct: 646 RVAAATLHGRSRKQRYKNDADWGYIATCANTLRESVSEWNESSRFADEPEMVPIPVYGNG 705 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + + E VDG + A + E+K Sbjct: 706 DVYSWQDYYERIERTHVDGEMIARGALIKPWLFTEIKE 743 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 21/184 (11%), Positives = 44/184 (23%), Gaps = 23/184 (12%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA--- 70 +K + + AK E + + + D +++ A Sbjct: 619 PLTIKLRTGTGAKQTTHKI-FAKAQTEWRVAAATLHGRSRKQRYKNDADWGYIATCANTL 677 Query: 71 -----------------EVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTL 112 E++ IP G + S +D + + D I AL P L Sbjct: 678 RESVSEWNESSRFADEPEMVPIPVYGNGDVYSWQDYYERIERTHVDGEMIARGALIKPWL 737 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 T + +R + + ++ + G Sbjct: 738 FTEIKERRDWDISSRERLDMMRKFAEYGLTHWGSDTHGVNTTRRFMCEMMSFTHRYVPTG 797 Query: 173 EIVL 176 + Sbjct: 798 LLEF 801 >UniRef50_Q3ABS1 Indole-3-glycerol phosphate synthase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=TRPC_CARHZ Length = 264 Score = 80.9 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 68/219 (31%), Gaps = 33/219 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D +A+ YA+ GA + G ++ V V+ +P I Sbjct: 76 DPEEVAQVYAKSGAAAISVLTEEDYFLGSP---EYLKAVRAVVSLPILRKDFILDPYQIY 132 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD + + + LA L + + T Sbjct: 133 EAKVLGADAVLLITSLLASVELKEMI---------------------------KITEGLG 165 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE-QLKKVREVCHVPLIASGG 209 + + +L+ V++ GA I +N + D+ +L V + V +++ G Sbjct: 166 MEALVEAHSLEEVEKALTAGARLIGINNRDLRTFATNIDVSLKLAPVLKEAGVVMVSESG 225 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + E +A A G L + G+ L Sbjct: 226 IRSKEDI-KALMTAGYHGILIGEALVRAPD-PGKALEVL 262 >UniRef50_B7XJM7 tRNA-dihydrouridine synthase 1 n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XJM7_ENTBH Length = 309 Score = 80.9 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 19/173 (10%), Positives = 49/173 (28%), Gaps = 7/173 (4%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + + + D I IN + V Sbjct: 54 VIQICGNDPSEMLATCLQIQQYCDAIDINLGCPQNIAKKGNYGSYLMDDFEKVKNIISTL 113 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLE 191 AE + + R + +T+ + + ++K G + ++ ++ + Sbjct: 114 AEQLTVPIFC----KIRVFESIEKTITYAKMIEKSGCSLLAVHGRTREQKGQNTGYVSFD 169 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 ++ V+ +P++++GG T A DG + ++ Sbjct: 170 HIRAVKNALSIPVVSNGGVLTHRDIKNAVEITGCDGIMIGEPILFIPSIFVDI 222 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 9/119 (7%) Query: 4 KRIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV- 60 K II L + K F E I + AK + G L + T G+ Sbjct: 107 KNIISTLAEQLTVPIFCKIRVF---ESIEKTITYAKMIEKSGCSLLAVHGRTREQKGQNT 163 Query: 61 --VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 V + V + IP GG+ + D + G D I I P L P++ + Sbjct: 164 GYVSFDHIRAVKNALSIPVVSNGGVLTHRDIKNAVEITGCDGIMIGEPILFIPSIFVDI 222 >UniRef50_B0S913 tRNA-dihydrouridine synthase n=7 Tax=Leptospira RepID=B0S913_LEPBA Length = 337 Score = 80.9 bits (198), Expect = 4e-14, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 54/189 (28%), Gaps = 5/189 (2%) Query: 58 GRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKIL-SFGADKISINSPALADPTLITR 115 G V I F + G + ++ +A++I D I +N Sbjct: 51 GNAKSLDMFRFVEMERPIVFQIFGSDLDTVVNASEIAAEQKPDIIDLNMGCSVSKVSHNG 110 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + G V L+ ++ ++ G I Sbjct: 111 SGAGLLKNIRLAGKMIEGIRNRTNLPVTA--KIRLGWDANSLNYLETLKVLEDSGVSAIS 168 Query: 176 LNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 ++ + G D + +++ +VP+ +G + + LE + VD L Sbjct: 169 VHGRTKAMAYTGIADWNAIGEIKSRANVPIYGNGDVQSYKEALEKKKTYGVDLVLIGRKA 228 Query: 235 HKQIINIGE 243 G+ Sbjct: 229 IGNPWVFGK 237 Score = 72.4 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 52/157 (33%), Gaps = 9/157 (5%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPF 77 K + + + + K + G + + T + + D + + + ++P Sbjct: 140 KIRLGWDANSL-NYLETLKVLEDSGVSAISVHGRTKAMAYTGIADWNAIGEIKSRANVPI 198 Query: 78 CVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G ++S ++A K ++G D + I A+ +P + + +F D Sbjct: 199 YGNGDVQSYKEALEKKKTYGVDLVLIGRKAIGNPWVFGKTPKQF------FPWYQIKDVI 252 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + S +++ ++ G E Sbjct: 253 LEHLDLMLNFYPTSDDYALILFRKHFIKYIENIGFPE 289 >UniRef50_D1AZV6 Dihydrouridine synthase DuS n=7 Tax=Campylobacteraceae RepID=D1AZV6_SULD5 Length = 312 Score = 80.5 bits (197), Expect = 5e-14, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 53/178 (29%), Gaps = 6/178 (3%) Query: 75 IPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 I V + S+++A IL+ G I +N + + + Sbjct: 68 IVQIVGSDLTSIKEAVLILNDMEGIAGIDLNCGCPVPKMVAQEAGSSLLLNLDHMQRVIE 127 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLE 191 +YT + R + + GA + ++ + G D + Sbjct: 128 TIKTYSNK---RYTSAKVRLGFNTKIPELIAKACENAGADFMSMHGRTRSGAYKAEVDYQ 184 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + + R +P+IA+G ++E L + +LK L Sbjct: 185 AIAEARAAVKIPVIANGDITSLEKALHVMSVTGCKNLMIGRGALGNPWIFYQLKNGLH 242 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPF 77 K N +I +AK GAD + + T S + VD ++ + IP Sbjct: 141 KVRLGFNTKI---PELIAKACENAGADFMSMHGRTRSGAYKAEVDYQAIAEARAAVKIPV 197 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGV 122 G I SLE A ++S G + I AL +P + +L + Sbjct: 198 IANGDITSLEKALHVMSVTGCKNLMIGRGALGNPWIFYQLKNGLHH 243 >UniRef50_Q5KPM6 Putative uncharacterized protein n=2 Tax=Filobasidiella neoformans RepID=Q5KPM6_CRYNE Length = 407 Score = 80.5 bits (197), Expect = 5e-14, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 55/179 (30%), Gaps = 5/179 (2%) Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 +++ I + KSL DAA+++S D I +N + + + Sbjct: 145 AQLVRGCLIAQFASPNAKSLADAAELISPYVDGIDLNCGCPQRWAYNEGIGCALLRKPEL 204 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 V + + R Q +T + + G + ++ + Sbjct: 205 VRDMVRGVKDRM--GWGWPVSIKIRIDSEQEKTEQLISNALQAGISHLTIHGRTRHQPST 262 Query: 187 GY-DLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +L +K + VP +A+G +E + V G +AA Sbjct: 263 DPVNLPGIKFAVDCVKGEVPCVANGDVWELEDARQMRLHTGVQGVMAARGLLANPALFA 321 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 31/106 (29%), Gaps = 13/106 (12%) Query: 18 VKGVQFRNHEII---------GDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVS 67 VK + L + G L + T V+ + Sbjct: 212 VKDRMGWGWPVSIKIRIDSEQEKTEQLISNALQAGISHLTIHGRTRHQPSTDPVNLPGIK 271 Query: 68 RVAEVID--IPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADP 110 + + +P G + LEDA ++ L G + LA+P Sbjct: 272 FAVDCVKGEVPCVANGDVWELEDARQMRLHTGVQGVMAARGLLANP 317 >UniRef50_A4YHD8 Indole-3-glycerol phosphate synthase n=13 Tax=Sulfolobaceae RepID=TRPC_METS5 Length = 250 Score = 80.5 bits (197), Expect = 5e-14, Method: Composition-based stats. Identities = 39/256 (15%), Positives = 69/256 (26%), Gaps = 52/256 (20%) Query: 5 RIIPCLDVRDGQVVKG-----VQFRNHEII-------GDIVPLAKRYAEEGADELVFYDI 52 +IIP + + VKG V D + AK + GA + Sbjct: 32 QIIPRI-----RAVKGAGLNPVIAEYKRKSPSGFSEDRDPISYAKSMEQGGAVAISVITE 86 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 G ++ R+A + IP + + S GAD + + L + Sbjct: 87 NTVFGGS---YEYLERIARNVKIPLLMKDFVVSENQVDTAYDLGADFVLLIVRILTE--- 140 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + +Y + + + + + GA Sbjct: 141 ------------------------RELSGLLEYVRSYGMEALVEVHDREDLDIALRSGAS 176 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL--IASGGAGTMEHFLEAFRDADVDGALA 230 I +N + E K+ E + +A G + E R+ D L Sbjct: 177 LIGVNSRD--LFSLTIQKEMAMKLLEQIPSTVTKVAESGIESAEEI-RLLREKGADAFLI 233 Query: 231 ASVFHKQIINIGELKA 246 S + I E Sbjct: 234 GSSLMRNPDKIKEFVQ 249 >UniRef50_Q06063 tRNA-dihydrouridine synthase 4 n=23 Tax=Saccharomycetales RepID=DUS4_YEAST Length = 367 Score = 80.5 bits (197), Expect = 5e-14, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 66/246 (26%), Gaps = 25/246 (10%) Query: 16 QVVKGVQFRNHEIIGDIVPLA------------KRYAEEGADELVFYDITASSDGRVVDK 63 ++K Q + G V +A + E D + I A R Sbjct: 27 HIIKTRQ----KTHGRPVTIAGPMVRYSKLPFRQLCREYNVDIVYSPMILAREYVRNEHA 82 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF---GADKISINSPALADPTLITRLADRF 120 D P V G+ ++ D K + D I IN + + Sbjct: 83 RISDLSTNNEDTPLIVQVGVNNVADLLKFVEMVAPYCDGIGINCGCPIKEQIREGIGCAL 142 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 ++ + + T + + L + G I ++ Sbjct: 143 IYNSDLLCSMVHAVKDKYGDKLRIETKIRIHEALDETVELCRK--LCDAGVDWITIHGRT 200 Query: 181 QDGVR-NGYDLEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + +L+ +K + E +VP+IA+G + + G +A Sbjct: 201 RRTRSSQPANLDAIKYIIENISDKNVPVIANGDCFKLSDLERITKYTGAHGVMAVRGLLS 260 Query: 237 QIINIG 242 Sbjct: 261 NPALFA 266 >UniRef50_D2VPP8 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VPP8_NAEGR Length = 427 Score = 80.5 bits (197), Expect = 6e-14, Method: Composition-based stats. Identities = 22/215 (10%), Positives = 59/215 (27%), Gaps = 10/215 (4%) Query: 38 RYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFC-VAGGIKSLEDAAKILS 94 E G D + + S + + A A ++ + Sbjct: 142 LCREYGCDVVYTPMIMSDCFHKSQKARDSDFTTHYYDSPLVVQFAANNPTDFSLACQLAA 201 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 D I +N + L + + +++ G + R Sbjct: 202 PYCDGIDLNCGCPQPYVMKESLGAALVTKPQKIFDMVHEANNKFISGMSRPIGVKIRLHP 261 Query: 155 TQWETLDWV-----QEVQKRGAGEIVLNMMNQDGV--RNGYDLEQLKKVREVCHVPLIAS 207 ++++ GA + ++ + + K ++++ +VP++ + Sbjct: 262 EDDTLEFRKTIELARQIEMAGASWVTVHGRTHKQRTKNTKVNPDGPKTIKQILNVPVMHN 321 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G T+ ++ DG ++A Sbjct: 322 GDIFTLGDSDRFAKETGCDGVMSARGLLSNPALFS 356 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 5/142 (3%) Query: 18 VKGVQFRNHEIIG--DIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEVI 73 VK + + + LA++ GA + + T + V+ + +++ Sbjct: 255 VKIRLHPEDDTLEFRKTIELARQIEMAGASWVTVHGRTHKQRTKNTKVNPDGPKTIKQIL 314 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 ++P G I +L D+ + G D + L++P L + Sbjct: 315 NVPVMHNGDIFTLGDSDRFAKETGCDGVMSARGLLSNPALFSGYDYVPFECIQRYLQIAI 374 Query: 133 YDAETGKYHVNQYTGDESRTRV 154 + + + + Sbjct: 375 QIGGVPFHILQHHIMFMLYSHH 396 >UniRef50_O82782 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic n=33 Tax=cellular organisms RepID=HIS4_ARATH Length = 304 Score = 80.1 bits (196), Expect = 6e-14, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 27/267 (10%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGD--------------IVPLAKRYAEEGADELV 48 A + PC+D+ G+ VK + + + AK Y E+G Sbjct: 43 AVQFRPCIDIHKGK-VKQIVGSTLRDLKEDGSVLVTNFESDKSAEEYAKMYKEDGLTGGH 101 Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 + A + + V GGI S E+ + GA + + S Sbjct: 102 VIMLGADPLSQAAAIGAL----HAYPGGLQVGGGINS-ENCMSYIEEGASHVIVTSYVFN 156 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + L + IV D K + + + + E Sbjct: 157 N--GKIDLERLKDIVSIVGKQRLILDLSCRKKDGRYAIVTDRWQKFSDVILDEKSLEFLG 214 Query: 169 RGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD--VD 226 + E +++ ++ +G + G D E + + +P+ +GG M+ VD Sbjct: 215 GFSDEFLVHGVDVEGKKLGIDEELVALLGNYSPIPVTYAGGVTVMDDVERIKDAGKGRVD 274 Query: 227 GALAASVF--HKQIINIGELKAYLATQ 251 S + ++ A+ Q Sbjct: 275 -VTVGSALDIFGGNLPYKDVVAWHHKQ 300 >UniRef50_A4S604 Predicted protein (Fragment) n=2 Tax=Mamiellales RepID=A4S604_OSTLU Length = 287 Score = 80.1 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 46/163 (28%), Gaps = 6/163 (3%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSR 68 +DV VK + +A+ GA +V + T + D + Sbjct: 128 IDV--PLTVKIRLGID--SSSQARRIAEGLENAGASAVVVHGRTKEQRYTKAADYDVIRD 183 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVV 127 + +IP G + + DA + G + + AL P + +R V Sbjct: 184 IVRERNIPIIGNGDVLTWYDARDRMEHSGVAAMMVGRGALIKPWIFKEYRERKCWNPTVE 243 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 Y + + R ++ + R Sbjct: 244 QRVGVYYTLRNYMREGFGDDELGKRRFDEFFPWHLGFFCRYRP 286 Score = 77.8 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 46/154 (29%), Gaps = 4/154 (2%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 FGAD + +N T L + + A + Sbjct: 84 EFGADFVDLNCGCPIHETWKRGLGAALLKKPAKLERLVEGIASRIDVPLTVKIRLGID-- 141 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGT 212 + + + ++ GA +V++ ++ D + ++ + ++P+I +G T Sbjct: 142 -SSSQARRIAEGLENAGASAVVVHGRTKEQRYTKAADYDVIRDIVRERNIPIIGNGDVLT 200 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + V + + E + Sbjct: 201 WYDARDRMEHSGVAAMMVGRGALIKPWIFKEYRE 234 >UniRef50_A2EF32 Dihydrouridine synthase, putative n=1 Tax=Trichomonas vaginalis RepID=A2EF32_TRIVA Length = 318 Score = 80.1 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 62/194 (31%), Gaps = 9/194 (4%) Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE---DAAKILSFGADKISINSPALADPTLI 113 G + + E + +AG + + AAK L+ AD + +N Sbjct: 57 QGSGYQNKFFNTCPEDHPLIAQIAGSNEDQDLIVAAAKDLAKYADGVDVNLGCTQKIASR 116 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV-----TQWETLDWVQEVQK 168 + C K ++ T+D+ +++++ Sbjct: 117 SEYGYFMVDNCQKREKTLELFRRLCKEVNCPICAKIRIFIDDSGEVSEKITIDFAKKLEE 176 Query: 169 RGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 G + ++ + + E +K + + ++P++A+GG T+E + + G Sbjct: 177 AGVSLLQVHGRAEHRNKQADVYNEIIKHIVQAVNIPVVANGGINTVEDAHKFMEETGAAG 236 Query: 228 ALAASVFHKQIINI 241 A K Sbjct: 237 VSVAQALLKDPTAF 250 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 7/102 (6%) Query: 15 GQVVKGVQFRNH--EIIGD-IVPLAKRYAEEGADELVFYDITASSDGRVVDK--SWVSRV 69 K F + E+ + AK+ E G L + A + D + + Sbjct: 147 PICAKIRIFIDDSGEVSEKITIDFAKKLEEAGVSLLQVHGR-AEHRNKQADVYNEIIKHI 205 Query: 70 AEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADP 110 + ++IP GGI ++EDA K + GA +S+ L DP Sbjct: 206 VQAVNIPVVANGGINTVEDAHKFMEETGAAGVSVAQALLKDP 247 >UniRef50_A4S141 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S141_OSTLU Length = 307 Score = 80.1 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 20/158 (12%), Positives = 47/158 (29%), Gaps = 7/158 (4%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AA +++ D + IN + Sbjct: 88 AATMIAPYCDGVDINFGCPQRIAKRGNYGAFLMDD----WKTVEALIRKLDEELPVPVTA 143 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLI 205 + R TL + + V+ GA + ++ ++ R + ++ +++ VP++ Sbjct: 144 KIRVYDDLETTLKYAKMVEAAGAQIVAVHGRTREQKRCADIRANWAYIRAIKDALKVPVL 203 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 A+G ++ DG L+A + Sbjct: 204 ANGDIRSLAEARACLEATGADGVLSAEPLLSNPALFSD 241 Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 4/93 (4%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVIDIPFC 78 + R ++ + + AK GA + + T + +++ + + + +P Sbjct: 144 KIRVYDDLETTLKYAKMVEAAGAQIVAVHGRTREQKRCADIRANWAYIRAIKDALKVPVL 203 Query: 79 VAGGIKSLEDAAKILSF-GADKISINSPALADP 110 G I+SL +A L GAD + P L++P Sbjct: 204 ANGDIRSLAEARACLEATGADGVLSAEPLLSNP 236 >UniRef50_O67657 Indole-3-glycerol phosphate synthase n=2 Tax=Aquificaceae RepID=TRPC_AQUAE Length = 257 Score = 80.1 bits (196), Expect = 7e-14, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 70/221 (31%), Gaps = 33/221 (14%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + AK Y + GA + G + V E + +P Sbjct: 67 NPEEQAKLYEKAGAIAISVLTDEKYFKGS---LEDLRNVRESVKLPLLRKDFTVHKVQIL 123 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + ++GAD + + L+D L + ++ + Sbjct: 124 EAKAYGADIVLLIVRMLSDKEL---------------------------KELLDFSEELG 156 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL--EQLKKVREVCHVPLIASG 208 + + + TLD + GA I +N + + + + E K++++ +I+ Sbjct: 157 LSPLVEVFTLDEAKRALDAGAKIIGINNRDLETFKVDINKTKELAPKIKDLGAKFVISES 216 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G E LE VDG L + K +LK L Sbjct: 217 GISKREEILELMNYQ-VDGFLIGTSLMKSENPYRKLKELLG 256 >UniRef50_B9PUI2 Dihydrouridine synthase domain-containing protein, putative n=3 Tax=Toxoplasma gondii RepID=B9PUI2_TOXGO Length = 608 Score = 79.8 bits (195), Expect = 7e-14, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 28/83 (33%), Gaps = 3/83 (3%) Query: 163 VQEVQKRGAGEIVLNMMNQDG---VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 + G + ++ ++ D ++ V++ +P+IA+G T E L Sbjct: 317 CDAFEAAGCACLCIHGRTKEEKAAFVGPCDWLAIRHVKQRLSIPVIANGAVETYEDALRC 376 Query: 220 FRDADVDGALAASVFHKQIINIG 242 D ++A + Sbjct: 377 LEFTGADAVMSAEGLLDNPMLFA 399 Score = 69.7 bits (169), Expect = 8e-11, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 4/92 (4%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFCVA 80 + D + L + G L + T D + V + + IP Sbjct: 305 DEERRLQDTLRLCDAFEAAGCACLCIHGRTKEEKAAFVGPCDWLAIRHVKQRLSIPVIAN 364 Query: 81 GGIKSLEDAAKILS-FGADKISINSPALADPT 111 G +++ EDA + L GAD + L +P Sbjct: 365 GAVETYEDALRCLEFTGADAVMSAEGLLDNPM 396 >UniRef50_A5USQ4 Indole-3-glycerol phosphate synthase n=8 Tax=Bacteria RepID=TRPC_ROSS1 Length = 269 Score = 79.8 bits (195), Expect = 8e-14, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 62/222 (27%), Gaps = 33/222 (14%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEV---IDIPFCVAGGIKSLE 87 D + LA YA GA + G + + + + +P I Sbjct: 72 DPLALAHTYASNGASAISVLTDVRFFQGSLKHLEGIRAMVDRGAVPPLPLLRKDFIIDPY 131 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 A+ ++GAD + + AL D TL + T Sbjct: 132 QVAEARAYGADALLLIVAALDDETL---------------------------AALLALTH 164 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL-KKVREVCHVPL-I 205 + + D ++ GA I +N + + + + + PL + Sbjct: 165 SFGMQALVEVHNEDELRRALDAGASIIGVNNRDLHSFTTTLETTRRLAALLPSSNRPLLV 224 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + G T EH R D L +++ Sbjct: 225 SESGIFTAEHV-ALVRSWGADAILVGEALVTAPDISSKVREL 265 >UniRef50_Q1QZQ6 Dihydrouridine synthase, DuS n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZQ6_CHRSD Length = 340 Score = 79.8 bits (195), Expect = 8e-14, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 50/163 (30%), Gaps = 1/163 (0%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 +A + + GA ++ +N A Q V AE Sbjct: 85 AANAVRAQALGARQVDLNFGCPAKTVNRHDGGASLLRQPERVHTVVRAVAEALAPLGIAV 144 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPL 204 T + L + + GA +V++ + E + +++ +P+ Sbjct: 145 TAKIRLGFDDKHVALACAEAAESGGAAHLVVHARTRREGYRPPAHWEWIGRIQARLSIPV 204 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 IA+G T+E + +A + + +K + Sbjct: 205 IANGDIWTLEDYWKARTLSGCADVMLGRGMLADPWLARRIKHW 247 Score = 56.3 bits (134), Expect = 9e-07, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 6/138 (4%) Query: 15 GQVV--KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAE 71 G V K + + + + A+ GA LV + T W+ R+ Sbjct: 141 GIAVTAKIRLGFDDKHV--ALACAEAAESGGAAHLVVHARTRREGYRPPAHWEWIGRIQA 198 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + IP G I +LED K + G + + LADP L R+ ++ Sbjct: 199 RLSIPVIANGDIWTLEDYWKARTLSGCADVMLGRGMLADPWLARRIKHWQRHGEMLPATP 258 Query: 131 TWYDAETGKYHVNQYTGD 148 AE + + Sbjct: 259 WSARAEILHAYAQRMRAH 276 >UniRef50_Q5ZRM0 Nitrogen regulation protein n=6 Tax=Legionella RepID=Q5ZRM0_LEGPH Length = 329 Score = 79.8 bits (195), Expect = 8e-14, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 58/187 (31%), Gaps = 8/187 (4%) Query: 64 SWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 ++ R + + ++G E AAK+ S GAD I IN Sbjct: 66 RYIYRAPTEKFLAYQISGNEPHVLAEAAAKLQSLGADLIDINCGCPKSKIRKKGAGSALL 125 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + L ++++ GA ++++ Sbjct: 126 EDPQK-----LIAIISRVRAAISIPLTIKIRIQNNEKDLTLAKQIEDAGAHALIVHGRRW 180 Query: 182 DGVRN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + + +Q+ ++ ++P+I +G + +A + DG + + + Sbjct: 181 TEDYDIPCNWQQIANIKNAVNIPVIVNGDINNIFSLRKALEISACDGFMISRAGTGKPWL 240 Query: 241 IGELKAY 247 +L Sbjct: 241 YRDLLNL 247 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 8/109 (7%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDK 63 R+ + + +K N + + LAK+ + GA L+ + + Sbjct: 137 RVRAAISI--PLTIKIRIQNNEKD----LTLAKQIEDAGAHALIVHGRRWTEDYDIPCNW 190 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPT 111 ++ + ++IP V G I ++ K L D I+ P Sbjct: 191 QQIANIKNAVNIPVIVNGDINNIFSLRKALEISACDGFMISRAGTGKPW 239 >UniRef50_A4RZE7 Predicted protein n=4 Tax=cellular organisms RepID=A4RZE7_OSTLU Length = 355 Score = 79.8 bits (195), Expect = 9e-14, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 56/204 (27%), Gaps = 22/204 (10%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +AK Y E GA L G + + + + P I Sbjct: 156 DPVKIAKAYEEGGAACLSVLTDEKFFQGGFENLALIRE--AGVTCPLLCKEFIVDAYQIY 213 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 +GAD I + + L + L + + + Y + Sbjct: 214 LARKYGADAILLIAAVLPNQDLKYFIKIAHSLGMKCLIEVHTYGEMKRVLDGDFPIDLLG 273 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 G +++ + NG E++K+ + ++ G Sbjct: 274 INNRD---------------LGTFEVSLSVTTDLMNGPLGEEVKR----RGITMVGESGI 314 Query: 211 GTMEHFLEAFRDADVDGALAASVF 234 T++ +D+ V L Sbjct: 315 FTIDDVN-LLQDSGVGAVLVGESL 337 >UniRef50_A3VWV8 TRNA-dihydrouridine synthase, putative n=4 Tax=Rhodobacterales RepID=A3VWV8_9RHOB Length = 339 Score = 79.8 bits (195), Expect = 9e-14, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 48/169 (28%), Gaps = 3/169 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK--YH 141 E A + GA I IN A + A G + E Sbjct: 79 WMAEAARVVADHGARIIDINMGCPAKKVVSAAGAGASGSALMRDLDHALRLIEAVVGAVD 138 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVC 200 V + + + G I ++ + G D + + + Sbjct: 139 VPVTLKTRLGWDEGCSNAAELAKRAEAAGVAMITVHGRTRCQFYRGAADWAMISDIAQAV 198 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 ++P+IA+G + A ++ G + + + E+ A + Sbjct: 199 NIPVIANGDIVGVASACRAMAQSNAAGVMIGRGARGRPWLLAEVAAAMG 247 Score = 72.4 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 54/169 (31%), Gaps = 5/169 (2%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKS 64 ++ +DV +K + + LAKR G + + T R D + Sbjct: 133 VVGAVDV--PVTLKTRLGWDEG-CSNAAELAKRAEAAGVAMITVHGRTRCQFYRGAADWA 189 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLITRLADRFGVQ 123 +S +A+ ++IP G I + A + A + I A P L+ +A G Sbjct: 190 MISDIAQAVNIPVIANGDIVGVASACRAMAQSNAAGVMIGRGARGRPWLLAEVAAAMGHG 249 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 A+ H G R + ++ G+ Sbjct: 250 TAPEVPRGAVLADLVAGHYEAMLGFYGRDLGLRVARKHLGWYMEAAGSD 298 >UniRef50_A6DP07 Indole-3-glycerol phosphate synthase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP07_9BACT Length = 260 Score = 79.8 bits (195), Expect = 9e-14, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 60/218 (27%), Gaps = 35/218 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V AK Y GA + G ++ ++ + +++P I Sbjct: 73 DPVKTAKNYQTLGAAAISVLTDKDYFQGS---IDYLKQIRQEVELPLLRKDFIIDELQIH 129 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD + + L + + LA + + Sbjct: 130 EARVAGADTFLLIAAVLTEDEMRNFLA---------------------------IGREFA 162 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP--LIASG 208 + + + + GA I +N + DL K+ + L+ Sbjct: 163 MEALVEIHDEEEAHKALAAGAKIIGVNNRDLRNFTT--DLSLTGKLAKFIPEDKILVGES 220 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G T + + D L + EL+A Sbjct: 221 GIKTGKDSRQLL-DCGCSAILVGESLMRDPQKFKELQA 257 >UniRef50_Q1N033 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N033_9GAMM Length = 321 Score = 79.4 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 20/174 (11%), Positives = 48/174 (27%), Gaps = 2/174 (1%) Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 + + + + E+A + GA ++IN + + Sbjct: 65 VHLQLLGSDPVAMAENACRAAELGAPVVNINFGCPSRFVNGRCGGAYLLQFPDQIHTILE 124 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLE 191 + HV L Q ++ G +I ++ + Sbjct: 125 SVRKALPEHVPLTAKMRLG-FKDDALALANAQAMESAGVRDICIHARTKVQGYRPPAHWH 183 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 Q+K +++ VP+IA+G + + + + +K Sbjct: 184 QIKNIKQQVKVPIIANGEIWNRRDYEACKAASHCEHVMLGRGAVADPELAATIK 237 Score = 66.3 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 15/152 (9%), Positives = 40/152 (26%), Gaps = 4/152 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + + A+ G ++ + T R + + + + +P Sbjct: 139 KMRLGFKDDAL--ALANAQAMESAGVRDICIHARTKVQGYRPPAHWHQIKNIKQQVKVPI 196 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I + D + + + + A+ADP L + + + Sbjct: 197 IANGEIWNRRDYEACKAASHCEHVMLGRGAVADPELAATIKGCESSDTWIHRLHDLIWML 256 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + R + ++ Sbjct: 257 DELVEFGGQSYAHGRIKQWFSFLKMSYEQAVP 288 >UniRef50_C1SJZ7 tRNA-dihydrouridine synthase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJZ7_9BACT Length = 340 Score = 79.4 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 38/103 (36%), Gaps = 2/103 (1%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVI 73 VK + + + + + K EEGA+ + + T + V + ++ Sbjct: 145 PLTVKIRLGWDKKNL-NYNEMIKIAYEEGAEAVTVHGRTKTEMFSGVVNYDLIADAKANA 203 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +P G + + K+L+ G D + I + P L + Sbjct: 204 KLPIIGNGDVVDVATYEKMLATGVDGVMIGRGMMKQPWLFESI 246 Score = 74.0 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 11/101 (10%), Positives = 33/101 (32%), Gaps = 2/101 (1%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLI 205 + ++ + GA + ++ + + +G + + + + +P+I Sbjct: 149 KIRLGWDKKNLNYNEMIKIAYEEGAEAVTVHGRTKTEMFSGVVNYDLIADAKANAKLPII 208 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +G + + + VDG + KQ + Sbjct: 209 GNGDVVDVATYEKML-ATGVDGVMIGRGMMKQPWLFESILN 248 >UniRef50_Q603E0 Putative HisA/HisF family protein n=1 Tax=Methylococcus capsulatus RepID=Q603E0_METCA Length = 227 Score = 79.4 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 73/252 (28%), Gaps = 41/252 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAE-EGADELVFYDIT 53 +IIP LD+ G+VV V+ R D + + + D D+ Sbjct: 1 MKIIPVLDLMQGRVVHAVKGRRENYRPLSSPLCPDADPRAVVEAFRNLYRFDTFYIADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + G ++ + D L G L Sbjct: 61 -ALMGLGCQNELIAALRTAFP-------------DIVFWLDRG---------------LP 91 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 V+G ++ + + + + + + Sbjct: 92 EAGEAALDGVVPVIGSESLPTVDRLQRMTTRDWILSLDFFDGTLKGCSRLLAQPQCWPER 151 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVP-LIASGGAGTMEHFLEAFRDADVDGALAAS 232 +++ +N+ G +G DL+ L +VR + LIA+GG E + L AS Sbjct: 152 VIVMTLNRVGSFDGPDLDLLDRVRRLTPHRALIAAGGVRDAGDL-EILERRGIHAVLVAS 210 Query: 233 VFHKQIINIGEL 244 H + + L Sbjct: 211 ALHSGSLELSRL 222 >UniRef50_Q47C15 Dihydrouridine synthase, DuS n=1 Tax=Dechloromonas aromatica RCB RepID=Q47C15_DECAR Length = 319 Score = 79.4 bits (194), Expect = 1e-13, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 51/163 (31%), Gaps = 2/163 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 E+A ++++ + +N A R + ++ T H+ Sbjct: 77 FMAENARRLVALNPAGVDLNFGCPAPTVFRHRGGSALLGEPELLNEITSAVRSVVPAHIP 136 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHV 202 T Q ++ G E++++ + E + KVR+ H+ Sbjct: 137 FTAKMRLGIDDTSRAIDC-AQALEAAGINELIVHGRTRSDGYRPPARWEWIDKVRDAIHI 195 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 PLIA+G T+E F + + ++ Sbjct: 196 PLIANGEVWTVEDFRNCQLATGCADIMVGRGAVADPLLARRVR 238 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKS 64 ++P K + + A+ G +EL+ + T S R Sbjct: 130 VVPA---HIPFTAKMRLGID--DTSRAIDCAQALEAAGINELIVHGRTRSDGYRPPARWE 184 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADP 110 W+ +V + I IP G + ++ED L+ G I + A+ADP Sbjct: 185 WIDKVRDAIHIPLIANGEVWTVEDFRNCQLATGCADIMVGRGAVADP 231 >UniRef50_Q6A959 TIM-barrel enzyme, NifR3 family n=2 Tax=Propionibacterium acnes RepID=Q6A959_PROAC Length = 411 Score = 79.0 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 25/223 (11%), Positives = 54/223 (24%), Gaps = 9/223 (4%) Query: 37 KRYAEEGADELVF---YDITASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDAA 90 + AE+GA L G ++ + G G+ + Sbjct: 67 QLCAEQGA-GLYVCEMITSRGLVYGDHKTHGMLAFAECEDVRSVQLYGVDPGMVGEATSI 125 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH-VNQYTGDE 149 +G + + +N + + G H V Sbjct: 126 LCEKYGVNHVDLNFGCPVPKVTRKGGGGVLPWKLDRFAAVVSAAVQAGDAHGVPVTVKTR 185 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASG 208 +D + GA + L+ G+ + + ++ + VP+I +G Sbjct: 186 IGIDPEHITYIDSARAAVDSGAAAVCLHARTVAEAYAGHSHWDAIGELVKTVDVPVIGNG 245 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + G + +L A + Sbjct: 246 DIWEASDAMAMVGQTGCAGVEVGRGCLGRPWLFRDLADAFAGR 288 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 51/190 (26%), Gaps = 9/190 (4%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVI 73 VK + E I + A+ + GA + + T A + + + + + Sbjct: 179 PVTVKTRIGIDPEHIT-YIDSARAAVDSGAAAVCLHARTVAEAYAGHSHWDAIGELVKTV 237 Query: 74 DIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 D+P G I DA ++ G + + L P L LAD F + Sbjct: 238 DVPVIGNGDIWEASDAMAMVGQTGCAGVEVGRGCLGRPWLFRDLADAFAGRDTTTLPTLG 297 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 + H + + + + + ++ Sbjct: 298 EVCAMIRRHAELLVKYQGMHGLVDMRKHMAWY------LKGFPVGGETRHVLGQISSFDE 351 Query: 193 LKKVREVCHV 202 L + Sbjct: 352 LDSLLATLDH 361 >UniRef50_O29545 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (HisA-1) n=1 Tax=Archaeoglobus fulgidus RepID=O29545_ARCFU Length = 223 Score = 79.0 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 38/251 (15%), Positives = 74/251 (29%), Gaps = 39/251 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIV--------PLAKRYAEEGADELVFYDITAS 55 ++ +D++ G+VV G K E L D+ Sbjct: 1 MKVFFVVDIKSGKVVAGKGGERESYPPITAISRLVSSDDALKVIEEIKPRFLYAADLDR- 59 Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 G + S +S++++ ++ G +S E+ K Sbjct: 60 IVGLGDNFSLLSKLSKRVE-ELIADCGFRSPEELEK------------------------ 94 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 L V I + D S + E + ++ G + Sbjct: 95 LPFTPVVGTETFDITQLDRKCYVSLDFKEKFLDASGKFESWEEVVKFLNSFDLYGLIVLP 154 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++ + DL L K E+ P++ GG +E ++ G L A+ H Sbjct: 155 IHAVGAMK----PDLSVLTKTLELSEHPVMLGGGISGVEDLER-LKEMGCSGVLVATAVH 209 Query: 236 KQIINIGELKA 246 K I + ++ Sbjct: 210 KGKIPLDVVRK 220 >UniRef50_Q1ZGI3 NifR3/Smm1 family protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGI3_9GAMM Length = 313 Score = 79.0 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 42/159 (26%), Gaps = 2/159 (1%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +A K L G+D I +N A ++ + + Sbjct: 80 NARKALLVGSDGIDLNFGCPAKAVNKSKGGAILLKSPETLYKIVKEVRASMHTCETLSVK 139 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIA 206 + + GA E+ ++ ++ + K+RE +P+ A Sbjct: 140 IRLGYADKSLAIENAQAICEA-GANELAVHARTKEEGYAPPAHWHWIAKIRESIDIPVTA 198 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 +G + E + + +K Sbjct: 199 NGDIFSAEDAKRCHEISGCHSLMIGRGALATPNLAQVIK 237 Score = 72.8 bits (177), Expect = 9e-12, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 4/128 (3%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRV 60 + K + + + VK + + + A+ E GA+EL + T Sbjct: 122 IVKEVRASMHTCETLSVKIRLGYADKSL--AIENAQAICEAGANELAVHARTKEEGYAPP 179 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADR 119 W++++ E IDIP G I S EDA + G + I ALA P L + Sbjct: 180 AHWHWIAKIRESIDIPVTANGDIFSAEDAKRCHEISGCHSLMIGRGALATPNLAQVIKGI 239 Query: 120 FGVQCIVV 127 Sbjct: 240 EEPYSWPQ 247 >UniRef50_B3LAS6 tRNA-dihydrouridine synthase, putative n=6 Tax=Plasmodium RepID=B3LAS6_PLAKH Length = 340 Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 46/157 (29%), Gaps = 6/157 (3%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 A + + + + +N + V + Sbjct: 98 AIEYIKNDVNAVDLNLGCPQQIAKKGNYGAFLLHKHDEVVNLVSDITNNCNIPITCKIRK 157 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLI 205 +TL+ ++Q R I ++ ++ D E +K ++E ++P+I Sbjct: 158 ---IDQDYQKTLNLCYDLQSRNVKMITVHGRTKEEKGVNIKECDYEIIKIIKERLNIPII 214 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 A+G E + D + A + ++ Sbjct: 215 ANGSIEHFEDVQKCLNYTKADAVMCAEILLEKPYFFS 251 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 6/103 (5%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAE 71 K + + + L + + T G + D + + E Sbjct: 150 PITCKIRKID--QDYQKTLNLCYDLQSRNVKMITVHGRTKEEKGVNIKECDYEIIKIIKE 207 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 ++IP G I+ ED K L++ AD + L P Sbjct: 208 RLNIPIIANGSIEHFEDVQKCLNYTKADAVMCAEILLEKPYFF 250 >UniRef50_D2RNR4 Indole-3-glycerol-phosphate synthase n=5 Tax=cellular organisms RepID=D2RNR4_ACIFE Length = 261 Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 62/221 (28%), Gaps = 36/221 (16%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 V +A++Y GA + T G ++ + + + P + Sbjct: 73 VAIARQYEALGAAAISVLTETDHFLGSDR---YLREIRQAVATPLLRKDFTIDAYMVVQA 129 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + GAD I + + L+D + Sbjct: 130 RTLGADAILLIAAILSD---------------------------SQLEEYRLMAESLGMD 162 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASGGA 210 + + + V+ + GA + +N N ++R ++P +A G Sbjct: 163 ALVEAHDEEEVERALRSGARVLGVNNRNLKDFTVDIGNSL--RLRPRVPKNIPFVAESGI 220 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + + A A V+G L + A L + Sbjct: 221 KSRQQ-TAALEQAGVNGVLIGETLMRSPDM-KAALAELRGE 259 >UniRef50_A2CB98 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus str. MIT 9303 RepID=A2CB98_PROM3 Length = 266 Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 101/260 (38%), Gaps = 13/260 (5%) Query: 1 MLAKRIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYA----EEGADELVFYDITA 54 M KRII L D + + FR E +GD L + Y DEL+ D++ Sbjct: 1 MPKKRIIFTLLYDSQSEHFLLSRNFRVQE-VGDYNWLKENYDFTNLSYYIDELLVIDVSR 59 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 S + +++ +P GG+ SL+ A + GADK+ +N+ +P LI Sbjct: 60 KKRNSQRFCSMLKKLSSDCFLPIGAGGGLDSLDKAKMLFDSGADKLILNTSVYENPELIK 119 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 L +G Q I+ +D + + T+ + GE+ Sbjct: 120 ALNKFYGQQAIIASVDIKKNELGIFDIYTH-----NGTKKASSLKDYQNIICKNEWIGEL 174 Query: 175 VLNMMNQDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 LN M +DG GYD LK P+I +GGAG H +E VD A + Sbjct: 175 YLNSMERDGTGQGYDFNMLKSFTNLNKKHPIILAGGAGKTSHIVEGLLTDGVDACATAHL 234 Query: 234 FHKQIINIGELKAYLATQGV 253 F+ + + + G+ Sbjct: 235 FNFIGDKLAKTRCIAKANGI 254 >UniRef50_Q6R3H4 Conserved protein n=1 Tax=Methylosinus sp. LW2 RepID=Q6R3H4_9RHIZ Length = 230 Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 30/250 (12%), Positives = 74/250 (29%), Gaps = 39/250 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAK-RYAEEGADELVFYDIT 53 ++IP +D+R+G V+ V D + +A+ + + D+ Sbjct: 1 MQVIPVIDIRNGVAVRAVAGDRKNYAPLTTPLAATSDPLDVARGLMTLHPFEAIYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A S + + L G Sbjct: 61 AIERRGNNRTSIAAIAKAIAPA--------------RLWLDAGFTGALEVGAWR------ 100 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 ++ + + E+ +++ + + + + Sbjct: 101 -------SLENVDPVFGSETLQESDDLRADKHAILSLDFSTRSFLGDPRLYDDESFWPDR 153 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVP-LIASGGAGTMEHFLEAFRDADVDGALAAS 232 +++ +++ G + G D+ + V + A+GGA ++ L ++A GAL A+ Sbjct: 154 LIVMTLSRVGAKQGPDVSRFYDVAARAGSRQVCAAGGARGLDDLL-VLKEAGAAGALVAT 212 Query: 233 VFHKQIINIG 242 H+ + Sbjct: 213 ALHEGRLTPA 222 >UniRef50_D1U4K9 Dihydrouridine synthase DuS n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4K9_9DELT Length = 339 Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 57/211 (27%), Gaps = 9/211 (4%) Query: 46 ELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL--EDAAKILSFGADKISIN 103 + +T G + ++ E + + G L ++ G +N Sbjct: 40 MVSVKGMT---FGNEGTQRLIATCPEDDPMVLQLFGADPDLFGPVMDWLVDLGYRNFDLN 96 Query: 104 SPALADPTLITRLADRFGVQCI---VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL 160 + L + + + A L Sbjct: 97 AGCPVRKVLKSGSGVKLMEDPDTLVRIASVMVERATAHARGGQVGVKFRLGFDKGNDTYL 156 Query: 161 DWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 + + ++ G + L+ + G D +L ++ +P++ASG T E + Sbjct: 157 ELARRLEDAGVHWVTLHPRYGRQMFAGQADWSKLGLLKRAVSIPVVASGDLFTAEDGVRC 216 Query: 220 FRDADVDGALAASVFHKQIINIGELKAYLAT 250 + VD + A + LA Sbjct: 217 VEETGVDAVMFARGALYDPAIFDRYRTLLAG 247 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 4/107 (3%) Query: 13 RDGQV-VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 R GQV VK + + LA+R + G + + D S + + Sbjct: 136 RGGQVGVKFRLGFDKGN-DTYLELARRLEDAGVHWVTLHPRYGRQMFAGQADWSKLGLLK 194 Query: 71 EVIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRL 116 + IP +G + + ED + G D + AL DP + R Sbjct: 195 RAVSIPVVASGDLFTAEDGVRCVEETGVDAVMFARGALYDPAIFDRY 241 >UniRef50_Q9BTJ3 DUS1L protein (Fragment) n=7 Tax=Euteleostomi RepID=Q9BTJ3_HUMAN Length = 299 Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 3/98 (3%) Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPL 204 + R +T+ + Q ++K G + ++ ++ E +K VR+ +P+ Sbjct: 15 CKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKAVRKAVAIPV 74 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 A+G ++ RD V G ++A Sbjct: 75 FANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFE 112 Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 33/126 (26%), Gaps = 7/126 (5%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEV 72 K F I V A+ + G L + T G + V + Sbjct: 13 VTCKIRVF---PEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKAVRKA 69 Query: 73 IDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + IP G I+ L+D + L G + L +P L + Sbjct: 70 VAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFEGRSPAVWELAEEYLDIV 129 Query: 132 WYDAET 137 Sbjct: 130 REHPCP 135 >UniRef50_C0WBV3 Putative uncharacterized protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WBV3_9FIRM Length = 261 Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 57/218 (26%), Gaps = 33/218 (15%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 +A+ Y + GA + G+ + R + +P + Sbjct: 75 IAETYEKSGASAISVLTEPTRFLGKDAYLEAIRR---RVKVPILRKDFTVDPYMVYEARC 131 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 GAD + + + L+D Q + Sbjct: 132 LGADAVLLIAALLSD---------------------------RELSEYRQMAESLGMDAL 164 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE-QLKKVREVCHVPLIASGGAGTM 213 + V K GA + +N N +L+ + +P IA G Sbjct: 165 VEAHDEREVTRALKSGAKILGVNNRNLKDFTVDVGNSLRLRPLVP-PEIPFIAESGIHDG 223 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 ++ + V G L + + ++K L Sbjct: 224 A-AVKLLAEHGVSGVLIGELLMRSPSIEAKMKELLEAA 260 >UniRef50_Q4SBU2 Inosine-5'-monophosphate dehydrogenase (Fragment) n=2 Tax=Clupeocephala RepID=Q4SBU2_TETNG Length = 571 Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 62/220 (28%), Gaps = 13/220 (5%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA 97 + G D + +S V S ++ + + V G + + A ++ G Sbjct: 265 LLVQAGVD---VVVLDSSQGNSVFQISMINYIKQKYADLQVVGGNVVTAAQAKNLIDAGV 321 Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 D + + + + + + + + Sbjct: 322 DALRVGMGCGSICITQEGNHPCCLLDLGINPHVCQKELLSVMSAQPASSVVTGP----PL 377 Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + LN + G G + ++ + VP+IA GG T+ H + Sbjct: 378 GHCYSAIFALAAPPHILDLNHVMACGRPQGTSVYKVAEYARRFSVPVIADGGIQTVGHVV 437 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 +A + S+ GE Y G +R+ Sbjct: 438 KAL-SLGASTVMMGSLLAATTEAPGE---YFFADG--VRL 471 >UniRef50_D2QYD3 Histidine biosynthesis protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QYD3_9PLAN Length = 251 Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 84/250 (33%), Gaps = 19/250 (7%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEE-GADELVFYDITA 54 R+IP +D+ G VV+GV R E + +A+ A L D+ A Sbjct: 8 RVIPVIDLLGGIVVRGVAGRRSEYRPLESQVTRSIEPAIVARDLVHATRATALYVADLDA 67 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 G+ + + GI S DA + + A + ++ T Sbjct: 68 IQKGQRSL--SIYEQMGASGARLWLDVGIASRADALRFCAELAHSEIPADLVIGLESIET 125 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + V+ + D + + + L+ + G I Sbjct: 126 AAS---LVELGAMARDELSGSAIFSVDMRAGQLISVAAELASRMPLELASLAVRSGFTRI 182 Query: 175 VLNMMNQDGVRNG-YDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +L ++ GV +G L +++R+ + +I GG + + L A A D L A Sbjct: 183 LLLDLSAVGVASGIPTLALARQLRDAWGSAIEIIVGGGVRSSDDLLAA-SQAGADAVLVA 241 Query: 232 SVFHKQIINI 241 S H + I Sbjct: 242 SAIHSRAIRF 251 >UniRef50_B9HRE5 Predicted protein (Fragment) n=11 Tax=Eukaryota RepID=B9HRE5_POPTR Length = 362 Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 24/221 (10%), Positives = 66/221 (29%), Gaps = 15/221 (6%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI-----KSLEDA 89 + GAD T G+ + + + R + + G +++E Sbjct: 32 RVCKALGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVTRTVELI 91 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + D I IN D + + + + +A +G Sbjct: 92 DQ--ECTVDFIDINMGCPIDIVVNKGAGSSLLTKPMRMKS--IIEATSGTVEKPITVKVR 147 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH--VPLIA 206 + + + ++ K GA + ++ ++ + D + + + + ++ Sbjct: 148 TGYFEGKSRIDSLIVDIGKWGASAVTIHGRSRQQRYSKLADWDYIYQCARKAPDSLQVLG 207 Query: 207 SGGAGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELKA 246 +G + + D ++ + A + E+K Sbjct: 208 NGDVFSFVDWNNHKSDCPELSSCMIARGALIKPWIFTEIKE 248 >UniRef50_C1DY86 Dihydrouridine synthase-like family protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DY86_9CHLO Length = 495 Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 46/162 (28%), Gaps = 5/162 (3%) Query: 15 GQVVKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEV 72 VK LA+ GA ++ + T R + + + Sbjct: 236 PLTVKIRLGAGG--SEAPARQLAEAVENAGAAAVIIHGRTKEQRYTRAANWDLIGEIQRE 293 Query: 73 IDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 IP G I + + L+ GA AL P + +A+ Sbjct: 294 RGIPVVGNGDILTHYEHRDRLARSGAHAAMTGRGALIKPWIFKEVAEGVEWAPTPEERVE 353 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 Y + + +T + R R ++ + + R E Sbjct: 354 VYLRLCSYFKEHFFTDEMGRGRYLEFMPWHFGFFCRYRPLPE 395 Score = 76.7 bits (187), Expect = 6e-13, Method: Composition-based stats. Identities = 8/109 (7%), Positives = 34/109 (31%), Gaps = 1/109 (0%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLI 205 ++ + V+ GA ++++ ++ + + + +++ +P++ Sbjct: 240 KIRLGAGGSEAPARQLAEAVENAGAAAVIIHGRTKEQRYTRAANWDLIGEIQRERGIPVV 299 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +G T + + A+ + E+ + Sbjct: 300 GNGDILTHYEHRDRLARSGAHAAMTGRGALIKPWIFKEVAEGVEWAPTP 348 >UniRef50_Q1ISJ1 Indole-3-glycerol phosphate synthase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=TRPC_ACIBL Length = 260 Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 62/220 (28%), Gaps = 33/220 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D++ LAK E GA L G + + R ++ + IP I Sbjct: 73 DVIALAKELEEAGAAALSVLTDVPHFQGSLENLE---RASQTVRIPCLRKDFILDPAQIV 129 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + ++GAD I + AL D L + Sbjct: 130 EARAYGADAILLIVAALTDLDLRNLRDEA---------------------------KRYG 162 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGG 209 + + D ++ G I +N N R + L+ E L +A G Sbjct: 163 LDVLCEVHDRDELKRAADLGFDLIGVNNRNLKTFRVDIENS-LRFAEEFPPNALRVAESG 221 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + E RDA L + L+ + Sbjct: 222 IHSREDIDR-LRDAAYSAFLIGESLMRADSPSATLRELIG 260 >UniRef50_B7FXL2 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FXL2_PHATR Length = 233 Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 20/194 (10%), Positives = 57/194 (29%), Gaps = 16/194 (8%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 G D+ ++++ G ++++ A + D I IN + Sbjct: 49 QYGPPQDRPLIAQIC---------GGDVQAVVACALAMQPYCDGIDINCGCPQNIAKRGN 99 Query: 116 LADRF--GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 ++ + T + V + + +L ++ G Sbjct: 100 YGAFLLEQEDVLLPLVHTLLQHLSVPLSVKVRLLPAETRQASLEASLRLYTKLVDAGVHL 159 Query: 174 IVLNMMNQDGVR---NGYDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGA 228 + ++ + D + ++ V + +P+ A+GG ++ DG Sbjct: 160 LTIHGRTRHHKGPLTGAADWDAIRVVVDRLGQRIPIFANGGVASLRDAQACLATTHADGV 219 Query: 229 LAASVFHKQIINIG 242 +++ + Sbjct: 220 MSSEALLEYPALFA 233 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 6/79 (7%) Query: 38 RYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVID--IPFCVAGGIKSLEDAAKI 92 + + G L + T G D + V + + IP GG+ SL DA Sbjct: 151 KLVDAGVHLLTIHGRTRHHKGPLTGAADWDAIRVVVDRLGQRIPIFANGGVASLRDAQAC 210 Query: 93 LS-FGADKISINSPALADP 110 L+ AD + + L P Sbjct: 211 LATTHADGVMSSEALLEYP 229 >UniRef50_B1C9Q3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9Q3_9FIRM Length = 329 Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 1/89 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 ++ GA I ++ ++ V G D + +KK +E VPLIA+G E Sbjct: 166 IEDGGADMITVHGRTREQVFTGEVDYDGIKKAKETASVPLIANGDLDNYLKAKEKMDYTG 225 Query: 225 VDGALAASVFHKQIINIGELKAYLATQGV 253 DG + + + ++ + V Sbjct: 226 ADGVMIGRGANYDPFIFSQFNECISGKKV 254 Score = 74.0 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 5/108 (4%) Query: 14 DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEV 72 VK N II DI+ K + GAD + + T VD + + E Sbjct: 144 KPVSVKVRLGFNENIIEDII---KAIEDGGADMITVHGRTREQVFTGEVDYDGIKKAKET 200 Query: 73 IDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADR 119 +P G + + A + + + GAD + I A DP + ++ + Sbjct: 201 ASVPLIANGDLDNYLKAKEKMDYTGADGVMIGRGANYDPFIFSQFNEC 248 >UniRef50_D2VPF2 Predicted protein n=2 Tax=Naegleria gruberi RepID=D2VPF2_NAEGR Length = 450 Score = 77.8 bits (190), Expect = 3e-13, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 47/165 (28%), Gaps = 8/165 (4%) Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 ++ + + I +N R V Sbjct: 173 FVQCGKRVWDLSKQKISAIDLNLGCPQRIARRGRYGSFLMEDLQTV----HSIINKAHLE 228 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVRE 198 + + R T+++V+ V GA + ++ ++ D ++ +RE Sbjct: 229 LPMPVTAKIRIFEDLELTMNYVKTVVDAGAQVLCVHGRTREQKGANQNYADWTVIRAIRE 288 Query: 199 -VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +P+IA+G T + + VD ++ + Sbjct: 289 QFPQIPMIANGNIRTFQDVQDCLEYTRVDAVMSGEGLLENPALFN 333 Score = 74.4 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 55/193 (28%), Gaps = 12/193 (6%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID- 74 K F + E+ + V K + GA L + T G D + + + E Sbjct: 236 KIRIFEDLELTMNYV---KTVVDAGAQVLCVHGRTREQKGANQNYADWTVIRAIREQFPQ 292 Query: 75 IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G I++ +D L + D + L +P L + Sbjct: 293 IPMIANGNIRTFQDVQDCLEYTRVDAVMSGEGLLENPALFNGGQFVHPLDI---SDKYVN 349 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ- 192 +T + + ++ D G + + + E Sbjct: 350 ICKTHFPPDHNNIKRHLFRILDKYIPEDRSDLRGILGKASLWEHYREFVDYARKIENEFD 409 Query: 193 LKKVREVCHVPLI 205 K++ + ++ Sbjct: 410 FKELEFEPSICVV 422 >UniRef50_C6QGP7 Histidine biosynthesis protein n=3 Tax=Rhizobiales RepID=C6QGP7_9RHIZ Length = 235 Score = 77.5 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 87/259 (33%), Gaps = 36/259 (13%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII---------GDIVPLAKRYAE-EGADELVFYDIT 53 IIP +DV G+VV+ +Q + + + +A+ D+ Sbjct: 1 MDIIPVIDVSRGKVVRAIQGKRAAYLPIETPLAATSEPGDVARGLRSLYPFRRAYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 +GR + V +++ + + G S A +L+ + + S +L Sbjct: 61 G-IEGRGRNTHLVPELSQALPNTELWIDAGTGSRSAARAVLAAPVATLVVGSESLESVRA 119 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 ++ + ++ + + + +R Sbjct: 120 WHEISAEAPGRTVLSLDFRGDEFMGPEALLADAALWPTR--------------------- 158 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGALAA 231 +++ +++ G ++ L+ + + A+GG ++E A GAL A Sbjct: 159 -VIVMTLDRIASEGGPNIALLETIAARAGGRRVYAAGGIRSLEDLAR-IGKAGAAGALVA 216 Query: 232 SVFHKQIINIGELKAYLAT 250 S+ H Q I+ G+LK Sbjct: 217 SILHAQKISAGDLKEIAGR 235 >UniRef50_Q88KX0 tRNA-dihydrouridine synthase A n=482 Tax=Bacteria RepID=DUSA_PSEPK Length = 336 Score = 77.5 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 23/215 (10%), Positives = 61/215 (28%), Gaps = 15/215 (6%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADP 110 T + ++ A + + G + + A G D++++N +D Sbjct: 53 TGALLHNDAH-RFLRHDASEHPLALQLGGSVPADLAACARLAEEAGYDEVNLNVGCPSDR 111 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + +V + V R + E D+V +V++ G Sbjct: 112 VQNNMIGACLMAHPALVADCVKAMRDAVSTPVTVKHRIGINGRDSYAELSDFVGQVREAG 171 Query: 171 AGEIVLNMMNQDGVRNGYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAF 220 ++ + +++ + + ++ +GG T++ Sbjct: 172 CRSFTVHARIAILEGLSPKENREIPPLRYDIAAQLKRDFPDLEIVLNGGIKTLDECQAHL 231 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 DG + + + E+ L + Sbjct: 232 ET--FDGVMLGREAYHNPYLLAEVDQQLFGSDAPV 264 Score = 44.7 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 12/119 (10%) Query: 15 GQVVKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------RVVDKS 64 VK N + + E G + A +G + Sbjct: 142 PVTVKHRIGINGRDSYAELSDFVGQVREAGCRSFTVHARIAILEGLSPKENREIPPLRYD 201 Query: 65 WVSRVAEVIDIPFCV-AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 +++ V GGIK+L++ L D + + A +P L+ + + Sbjct: 202 IAAQLKRDFPDLEIVLNGGIKTLDECQAHLET-FDGVMLGREAYHNPYLLAEVDQQLFG 259 >UniRef50_D2VK62 Dihydrouridine synthase, DuS n=1 Tax=Naegleria gruberi RepID=D2VK62_NAEGR Length = 388 Score = 77.5 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 53/183 (28%), Gaps = 6/183 (3%) Query: 74 DIPFCVAGGIKSLEDAAKILSF---GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 +P + G S E A ++ G D I +N ++ + Sbjct: 113 KVPTVLQLGTSSPELALQVAELMIDGYDAIDVNMGCPKKFSVKGGMGSALLRPENQENAF 172 Query: 131 TWYD--AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNG 187 + + + + R T T++ +++Q G I ++ R Sbjct: 173 AILRALVKGIQEKHGKPVTCKIRLLDTTENTIELYEKLQATGVTAICVHARYIPQRPREK 232 Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + V ++ VP+IA+G E + A + + K Sbjct: 233 AHSHLVDPVSKITKVPIIANGDVFKPEDIDRIKDLTGCSSVMIARGAMWNLSIFRKEKVL 292 Query: 248 LAT 250 L Sbjct: 293 LDK 295 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 23/188 (12%), Positives = 63/188 (33%), Gaps = 7/188 (3%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAE 71 + G+ V + R + + + L ++ G + + R V V++ Sbjct: 185 KHGKPV-TCKIRLLDTTENTIELYEKLQATGVTAICVHARYIPQRPREKAHSHLVDPVSK 243 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + +P G + ED +I G + I A+ + ++ + + + Sbjct: 244 ITKVPIIANGDVFKPEDIDRIKDLTGCSSVMIARGAMWNLSIFRKEKVLLDKLVVAKELL 303 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV--LNMMNQDGVRNGY 188 +++Y T +T + + + +G ++ L+ + + + Sbjct: 304 DELIKYNYHSGLSKYILKRM--FETHAKTKLYERLAKCKGFDDLHKALHFNDNEDLSKEL 361 Query: 189 DLEQLKKV 196 EQ+ + Sbjct: 362 TPEQIASI 369 >UniRef50_UPI00016C36C9 phosphoribosylformimino-5-aminoimidazole carboxamide isomerase family protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C36C9 Length = 235 Score = 77.5 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 37/241 (15%), Positives = 66/241 (27%), Gaps = 23/241 (9%) Query: 13 RDGQVVKGVQFRNHEI---------IGDIVPLAKRY-AEEGADELVFYDITASSDGRVVD 62 +G VV+ V +A+ GA EL D+ + G Sbjct: 1 MNGVVVRAVGGDRKNYRPVRSPLTPSTVPTDIAQALLRSVGAGELYVADLD-AITGSARV 59 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 V + E +P + G D + R+ + Sbjct: 60 TPSVEALMEACAVPVWLDAG--------TGRRDVLDWPPHQNLRPVVGFETCRVPEVLAE 111 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + + + + L + V G +++ + + Sbjct: 112 ALLEPRQRPVAFSLDLRNGQLLGNWRAWGLAGD-RDALALTRRVVDMGVRTLIVLDLARV 170 Query: 183 GVRNGYDLEQLKKV--REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G G ++L +V E + LIA GG T A G L AS H+ + Sbjct: 171 GTGTGAGTDELVRVIRAEFPDLDLIAGGGVRTWSDVER-LGKAGATGVLVASALHEGTLV 229 Query: 241 I 241 + Sbjct: 230 L 230 >UniRef50_UPI000186DA49 tRNA-dihydrouridine synthase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186DA49 Length = 332 Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 58/168 (34%), Gaps = 2/168 (1%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I A +AAK++ +D + +N + + + + + Sbjct: 70 IVQFAANNTFDFSEAAKLVFPFSDGVDLNCGCPQRWAMKIGIGAQLLSEPETIKD--IVL 127 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + N + R T+D ++++K G + ++ ++ ++ +K Sbjct: 128 NVKNQISCNYSVSVKLRLLNDIKSTVDLCKKLEKTGVTFLTIHGRTKEQRSEPVNIAAIK 187 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + + +P+IA+G T++ + G ++A + Sbjct: 188 DIVDSVQIPIIANGDVKTLQDAQLLQQLTGCQGVMSARGLLQNPSLFQ 235 Score = 77.1 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 41/164 (25%), Gaps = 4/164 (2%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI 75 VK I V L K+ + G L + T V+ + + + + + I Sbjct: 139 VSVKLRL---LNDIKSTVDLCKKLEKTGVTFLTIHGRTKEQRSEPVNIAAIKDIVDSVQI 195 Query: 76 PFCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P G +K+ + G + L +P+L + + Sbjct: 196 PIIANGDVKTLQDAQLLQQLTGCQGVMSARGLLQNPSLFQGYNETPLECVKKWVDISLNS 255 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + + + + +N Sbjct: 256 NIHFTTFHHHLVFMLEKILPKKIRRKFNCLNNYEDPFKLYEVNN 299 >UniRef50_A6G755 Indole-3-glycerol-phosphate synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G755_9DELT Length = 264 Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 63/229 (27%), Gaps = 41/229 (17%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 D +A Y GA + DG + V + +P I S Sbjct: 71 LRESADPKHIASLYVAAGAAAISVLT-DRHFDGS---FEDLRTVRAAVSVPVLCKDFIIS 126 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + GAD I + AL P L ++ + Sbjct: 127 RSQIIRARQEGADAILLIVAALEPPMLR---------------------------DLHNF 159 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP-- 203 D + + V+ GA + LN N DL+ + +R VP Sbjct: 160 ATDLGLQCLVEAHDDHEVERAMAAGAKIVGLNSRNLQTF--EVDLDNI--IRYRPDVPRE 215 Query: 204 ---LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + G + R A VD L SV + +L +A Sbjct: 216 GFLYVGESGIQDRKDVRR-LRAAGVDAILVGSVLMRSEDPGAKLAELIA 263 >UniRef50_A2EN54 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2EN54_TRIVA Length = 321 Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 6/114 (5%) Query: 7 IPCLDVRDGQVVKGVQFRNH---EIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVD 62 IP ++ VK + I V AK E GA + + +A+ ++ Sbjct: 133 IPS-EITVPLYVKIRALTDESGIPSIPITVDFAKHLEEAGASLITIHGRSAAQDKHGPLN 191 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITR 115 K V V + + IP V GGI SL+DA ++ GA L DPTL + Sbjct: 192 KELVKAVVQAVSIPVIVNGGINSLDDARNMIRETGAIAAMSAQSLLMDPTLFDK 245 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 41/91 (45%), Gaps = 1/91 (1%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGT 212 + T+D+ + +++ GA I ++ + ++G + E +K V + +P+I +GG + Sbjct: 155 PSIPITVDFAKHLEEAGASLITIHGRSAAQDKHGPLNKELVKAVVQAVSIPVIVNGGINS 214 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGE 243 ++ R+ A++A + Sbjct: 215 LDDARNMIRETGAIAAMSAQSLLMDPTLFDK 245 >UniRef50_A8QBG9 PP3111 protein, putative n=1 Tax=Brugia malayi RepID=A8QBG9_BRUMA Length = 513 Score = 77.1 bits (188), Expect = 5e-13, Method: Composition-based stats. Identities = 18/173 (10%), Positives = 47/173 (27%), Gaps = 15/173 (8%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +A +++ D + +N ++ + + Sbjct: 131 NACQLVESFCDGVDLNLGCPQLIAKRGHYGAYLQEDLKLICEMITLLHSHSRLPL----S 186 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPL 204 + R ET+ + + + K GA + ++ ++ D ++ V VP+ Sbjct: 187 CKIRILQDINETVAYARALVKAGACMLTVHGRTREQRGPNTGLADWYAMRAVVSAVDVPV 246 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE--------LKAYLA 249 +A+G ++A + + YL Sbjct: 247 LANGNIQLPGDVDRCLEITGASAIMSAEGILSNPYLFEKRHEVNWTAAREYLD 299 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 4/104 (3%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDIPFC 78 + R + I + V A+ + GA L + T G + D + V +D+P Sbjct: 188 KIRILQDINETVAYARALVKAGACMLTVHGRTREQRGPNTGLADWYAMRAVVSAVDVPVL 247 Query: 79 VAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFG 121 G I+ D + L GA I L++P L + + Sbjct: 248 ANGNIQLPGDVDRCLEITGASAIMSAEGILSNPYLFEKRHEVNW 291 >UniRef50_B6JXB4 tRNA-dihydrouridine synthase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JXB4_SCHJY Length = 347 Score = 77.1 bits (188), Expect = 5e-13, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 56/158 (35%), Gaps = 3/158 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 L A++I++ D I IN + + Q + + Sbjct: 88 LAQASEIVAPYTDAIGINCGCPQPWAIQEGIGSALLKQPQ--KVHELVRSVKSALGETFC 145 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPL 204 + R +T +Q ++ GA I ++ + + DLE ++ VR +P+ Sbjct: 146 VEVKIRLDNDLEKTRQLMQTAERAGADFITVHGRRRADRSSFPVDLEAIRSVRPCVSIPV 205 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +A+G ++ L+ + DG ++A + Sbjct: 206 VANGDVNDLDTGLKIAEYTNTDGVMSARGLMENPALFA 243 Score = 67.4 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 36/145 (24%), Gaps = 5/145 (3%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIP 76 VK + L + GAD + + + VD + V + IP Sbjct: 148 VKIRL---DNDLEKTRQLMQTAERAGADFITVHGRRRADRSSFPVDLEAIRSVRPCVSIP 204 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + L+ KI + D + + +P L + Sbjct: 205 VVANGDVNDLDTGLKIAEYTNTDGVMSARGLMENPALFAGYTSTPWGCVEKFVAYATGYS 264 Query: 136 ETGKYHVNQYTGDESRTRVTQWETL 160 + + + + Sbjct: 265 LNFQLFEHHLMTMMGKMTTKRERMQ 289 >UniRef50_Q6C4K3 tRNA-dihydrouridine synthase 3 n=11 Tax=Saccharomycetales RepID=DUS3_YARLI Length = 622 Score = 77.1 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 71/279 (25%), Gaps = 50/279 (17%) Query: 5 RIIPC----LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGAD------ELVFYDITA 54 RI P LD++ +V +G+ +P + + GAD L Sbjct: 234 RIRPSEKKKLDLKGKYIVS-----PLTTVGN-LPYRRLMKDLGADVTYGEMALTL----P 283 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL--------EDAAKILSFGADKISINSPA 106 G + + + + + + A L G +I++N Sbjct: 284 LIQGHKAEWALTRCHSSEVTEGNHFGVQVTAPKHWQAIKAAQAVSELCTGISEINLNCGC 343 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 D Q + V + T T + + Sbjct: 344 PIDLVYRQGAGSALMDQQGKTARIVRGMSMVSGD-VPITVKMRTGTGSTPTAKKLTARLL 402 Query: 167 QKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC--------------------HVPLI 205 + L+ ++ D +++V + ++ Sbjct: 403 AEGQTAAFTLHGRSRAQRYTKLADWNYIREVADSVVNTRDDVREKSELDDHVISHPTWVV 462 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 +G T + A +A VD + A + E+ Sbjct: 463 GNGDCYTWSDWHRAVDEAHVDSVMVARGALIKPWIFEEV 501 >UniRef50_B1XI00 Dihydrouridine synthase A n=8 Tax=Chroococcales RepID=B1XI00_SYNP2 Length = 344 Score = 77.1 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 22/207 (10%), Positives = 53/207 (25%), Gaps = 14/207 (6%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRL 116 + A I + G E A +G D+I++N + Sbjct: 52 HGDRPKLLDFDAAEHPISLQLGGDNPKELAECAKVGEDWGYDEINLNVGCPSPRVQQGNF 111 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 Q +V V + + + +++ V G + Sbjct: 112 GACLMTQPELVADCVAAMQGAVNIPVTVKHRIGVDEQDSYADLCRFIEIVSATGCDRFSV 171 Query: 177 NMMNQDGVRNGYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + + +++ + H+ + +GG T+EH VD Sbjct: 172 HARKAWLQGLSPKENRTVPPLRYADVYRLKQDFPHLWIEINGGITTLEHIQTHLTQ--VD 229 Query: 227 GALAASVFHKQIINIGELKAYLATQGV 253 + + + + + + Sbjct: 230 AVMVGRAAYDNPYLFATVDRDIYGEAI 256 Score = 47.0 bits (110), Expect = 6e-04, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 12/128 (9%) Query: 15 GQVVKGVQFRNHEII-GDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKS 64 VK + + D+ + + G D + A G + + Sbjct: 136 PVTVKHRIGVDEQDSYADLCRFIEIVSATGCDRFSVHARKAWLQGLSPKENRTVPPLRYA 195 Query: 65 WVSRVAEVIDIPFC-VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 V R+ + + + GGI +LE L+ D + + A +P L + + Sbjct: 196 DVYRLKQDFPHLWIEINGGITTLEHIQTHLTQ-VDAVMVGRAAYDNPYLFATVDRDIYGE 254 Query: 124 CIVVGIDT 131 I Sbjct: 255 AIQPKSRH 262 >UniRef50_B9XLX7 Dihydrouridine synthase DuS n=3 Tax=Verrucomicrobia RepID=B9XLX7_9BACT Length = 340 Score = 77.1 bits (188), Expect = 6e-13, Method: Composition-based stats. Identities = 19/180 (10%), Positives = 49/180 (27%), Gaps = 3/180 (1%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I + I SL +AK L I L P I G Sbjct: 66 IAQMIGNDIPSLVRSAKELQQYP--IVAVDLNLGCPAPIVYRKCAGGGLLREPKRVDSIL 123 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-NGYDLEQL 193 ++T + + + K + ++ + + + + Sbjct: 124 GALRDAISVKFTVKTRIGFDSTGVFDELLPIFAKHSIDLLTVHGRTVQEMYRSEVHYDFI 183 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + + P++A+G + + E + G + + +++ + + + Sbjct: 184 ARAAQAVSCPVLANGNVYSAKKAEEVLQFTGARGLMIGRGVIRNPWLFHQIRHHRRGEPI 243 Score = 67.4 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 4/127 (3%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVA 70 + VK + + D L +A+ D L + T R V +++R A Sbjct: 130 ISVKFTVKTRIGFDSTGVFD--ELLPIFAKHSIDLLTVHGRTVQEMYRSEVHYDFIARAA 187 Query: 71 EVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + + P G + S + A ++L GA + I + +P L ++ + I + Sbjct: 188 QAVSCPVLANGNVYSAKKAEEVLQFTGARGLMIGRGVIRNPWLFHQIRHHRRGEPIFIPK 247 Query: 130 DTWYDAE 136 Sbjct: 248 GHDVLQY 254 >UniRef50_Q73RG6 Dihydrouridine synthase, putative n=1 Tax=Treponema denticola RepID=Q73RG6_TREDE Length = 337 Score = 76.7 bits (187), Expect = 6e-13, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 49/190 (25%), Gaps = 11/190 (5%) Query: 67 SRVAEVIDIPFCVAG---GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 A + + G + A +I++ GA ++ A Sbjct: 69 KSAAACVPLLLQYGGFGIDLNMGCCAPQIVNTGA-------GFAWMKKPLSETASLVSKV 121 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 V + A + L + + + G I L+ Q Sbjct: 122 KKAVLLYDEQKAGPQTEPIRLSVKLRLGEEENYDRLLSFCKMLVSEGVDLITLHPRTQKQ 181 Query: 184 VRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + E ++ VP+ +G ++E + G + ++ Sbjct: 182 KYSRPCKHEYTARLASDLSVPVYGNGDINSLETLEKIASKYPCAGWMIGRAAVQKPWIFY 241 Query: 243 ELKAYLATQG 252 EL + G Sbjct: 242 ELSKGILKNG 251 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 34/103 (33%), Gaps = 3/103 (2%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVID 74 VK ++ K EG D + + T R + +R+A + Sbjct: 142 LSVKLRLGEEENY-DRLLSFCKMLVSEGVDLITLHPRTQKQKYSRPCKHEYTARLASDLS 200 Query: 75 IPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 +P G I SLE KI S I A+ P + L Sbjct: 201 VPVYGNGDINSLETLEKIASKYPCAGWMIGRAAVQKPWIFYEL 243 >UniRef50_UPI00015B403F PREDICTED: similar to MGC79829 protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B403F Length = 346 Score = 76.7 bits (187), Expect = 6e-13, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 55/160 (34%), Gaps = 2/160 (1%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + +A ++++ ++ + +N L + + + Sbjct: 80 VDDFVEATEMVAPYSNGVDLNCGCPQRWALKDGYGADLLTKPQ--LVKELVSNVRNRIPK 137 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV 202 + R +T+++ + ++ G + ++ D DL+ LK VR H+ Sbjct: 138 PFTVSVKIRILKDIKKTIEFSRAIEHAGVSFLTVHARTPDMRNEPIDLDSLKLVRSCVHL 197 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 P+IA+G + E + ++ +G + A Sbjct: 198 PMIANGNVRSFEDAKTLYEESKCNGVMVAGGILTNPAIFS 237 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 21/190 (11%), Positives = 51/190 (26%), Gaps = 8/190 (4%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI 75 VK + I + ++ G L + T +D + V + + Sbjct: 141 VSVKIRI---LKDIKKTIEFSRAIEHAGVSFLTVHARTPDMRNEPIDLDSLKLVRSCVHL 197 Query: 76 PFCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRLA----DRFGVQCIVVGID 130 P G ++S EDA + + + L +P + + + + Sbjct: 198 PMIANGNVRSFEDAKTLYEESKCNGVMVAGGILTNPAIFSGYKNTPVECIQDWLDITSTM 257 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 + + V ++ + L+ +V + + + Sbjct: 258 STQFMCMHHHLVFMLEKVLTKKEKLVFNVLNNKSDVYDFLKERFDIQPRTFEKEYSVTKC 317 Query: 191 EQLKKVREVC 200 E R+ Sbjct: 318 EFNAVPRKNV 327 >UniRef50_C0GDK9 Indole-3-glycerol-phosphate synthase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDK9_9FIRM Length = 259 Score = 76.7 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 61/230 (26%), Gaps = 40/230 (17%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + + + LA+ Y GA + +T + V V + +P Sbjct: 60 KGDFGLTLT-VEELARAYESGGARAISV--LTEEDFFKGSATDLVK-VKSAVTLPVLRKD 115 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I + + GAD + + + L + L L + V Sbjct: 116 FIIDSYQLYESRALGADAVLLIAGFLPEKELRAYLQICDELDLAAVV------------- 162 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH 201 + + D +Q GA + +N N + ++ Sbjct: 163 --------------ETHSADEIQMALTAGARIVGINNRNLQNFTTDVNH----TLQLAPQ 204 Query: 202 VP----LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +P L++ G + A D L + +++ Sbjct: 205 IPDNVLLVSESGIESAVDVH-LLGAAGADAVLVGETLVRSANPTAKIREL 253 >UniRef50_B7PD41 tRNA-dihydrouridine synthase, putative n=1 Tax=Ixodes scapularis RepID=B7PD41_IXOSC Length = 214 Score = 76.7 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 41/112 (36%) Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 + + R +T+D Q+++ + ++ +D +L Sbjct: 19 MVHQTRNRLSDPGFTVSVKIRICEDMRKTVDMCQKLEAARVSFVTVHGRTKDQRSEPVNL 78 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 E +K V++ +P++A+G ++ +R +G +AA + Sbjct: 79 EAIKNVKDALRIPVVANGDVTSLREADRVYRATGTNGVMAARGLLENPAMFQ 130 Score = 73.6 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 15/134 (11%), Positives = 35/134 (26%), Gaps = 4/134 (2%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI 75 VK + V + ++ + + T V+ + V + + I Sbjct: 34 VSVKIRICEDMR---KTVDMCQKLEAARVSFVTVHGRTKDQRSEPVNLEAIKNVKDALRI 90 Query: 76 PFCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P G + SL +A + + G + + L +P + + Sbjct: 91 PVVANGDVTSLREADRVYRATGTNGVMAARGLLENPAMFQGTEHTPASCVRDWLWLSTQL 150 Query: 135 AETGKYHVNQYTGD 148 + Sbjct: 151 GCPLAQFHHHLMFM 164 >UniRef50_A2FU21 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2FU21_TRIVA Length = 322 Score = 76.7 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 53/152 (34%), Gaps = 5/152 (3%) Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 ++ G + + + ++ + + + D Sbjct: 101 INCGCTQHIARRGQYGYFMVNNENKRKNVIEMVKN----IVASINVPLSIKFRLIDGEDG 156 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAG 211 + T + +E++ G I ++ ++ + G D E ++K+ E +P++A+GG Sbjct: 157 KPDVDITCKFAKELEDAGVSLISVHGRAKNSNKAGPVDAEAIRKIAESVSIPVMANGGVR 216 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 T E +E F+++ G + + Sbjct: 217 TKEEAIEMFKESHAAGVMVGQGLLMNPKAFSD 248 Score = 73.6 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 55/151 (36%), Gaps = 3/151 (1%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHE-IIGDIVPLAKRYAEEGADELVFYDITA-SSDGR 59 + K I+ ++V + + + + + AK + G + + S+ Sbjct: 132 MVKNIVASINVPLSIKFRLIDGEDGKPDVDITCKFAKELEDAGVSLISVHGRAKNSNKAG 191 Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLAD 118 VD + ++AE + IP GG+++ E+A ++ A + + L +P + + Sbjct: 192 PVDAEAIRKIAESVSIPVMANGGVRTKEEAIEMFKESHAAGVMVGQGLLMNPKAFSDTPE 251 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 V + W + + + + Sbjct: 252 HDPVAISREYLQLWKEYPDPNFFIARRHIFN 282 >UniRef50_A2DHB4 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DHB4_TRIVA Length = 312 Score = 76.7 bits (187), Expect = 7e-13, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 57/158 (36%), Gaps = 6/158 (3%) Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 +++ D + L+ G + + + ++ I + Sbjct: 90 DVENFCDMIE-LNCGCTHCFASRSG----CGFFLIDTQKHRDSALILIQNLIKSINKPVS 144 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC 200 + + + + T+ + Q++++ G I ++ Q + G D + +K V + Sbjct: 145 IKIRLISDDNSVPSLERTVKFAQDLERVGVSLITVHARTQQADKKGDVDYDAIKAVVQAV 204 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 VP+IA+GG ++E E + +A F K Sbjct: 205 SVPVIANGGISSLEQAQEIIQRTGAYAVMAGQCFFKNP 242 Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 5/106 (4%) Query: 12 VRDGQVVKGVQFRNHEII---GDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVS 67 + +K + + V A+ G + + T + VD + Sbjct: 139 INKPVSIKIRLISDDNSVPSLERTVKFAQDLERVGVSLITVHARTQQADKKGDVDYDAIK 198 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTL 112 V + + +P GGI SLE A +I+ GA + +PT Sbjct: 199 AVVQAVSVPVIANGGISSLEQAQEIIQRTGAYAVMAGQCFFKNPTC 244 >UniRef50_C0QXB6 Dihydrouridine synthase-like (DUS-like) FMN-binding domain protein n=2 Tax=Brachyspira RepID=C0QXB6_BRAHW Length = 325 Score = 76.7 bits (187), Expect = 8e-13, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 58/195 (29%), Gaps = 7/195 (3%) Query: 62 DKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSF-GADKISINSPALADPTLITRLADR 119 ++ + I + G + A +I G I IN + Sbjct: 58 TYRYMEHKEDEYPISLQLFGANEDDYKRAIEITDLSGFSFIDINMGCPTKKVVKNNGGAG 117 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 + + +A + + + ++ +++ GA + L+ Sbjct: 118 LLED--TDKMISVLNAVKSVSPLPVSVKIRLGLKRGEGGEIERALAMKENGACFLTLHGR 175 Query: 180 NQDGVRNG-YDLEQLKKVREVCHVP--LIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + G D E + K++E LI +G + E ++AF + VDG + Sbjct: 176 YASDMYRGTADWEAIAKIKEALGEDYILIGNGDIKSKEDAVKAFDISKVDGIMVGRGAIG 235 Query: 237 QIINIGELKAYLATQ 251 EL Sbjct: 236 NPWIFTELNTIFEDN 250 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 48/163 (29%), Gaps = 5/163 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK G+ + A E GA L + AS R D ++++ E + Sbjct: 139 PVSVKIRLGLKRGEGGE-IERALAMKENGACFLTLHGRYASDMYRGTADWEAIAKIKEAL 197 Query: 74 --DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 D G IKS EDA K D I + A+ +P + T L F Sbjct: 198 GEDYILIGNGDIKSKEDAVKAFDISKVDGIMVGRGAIGNPWIFTELNTIFEDNDEYNNKI 257 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 D + E V+ + G Sbjct: 258 DEKDNLKNIIKEHINGCCELYGEVSGIHFMRKFIMKYLTGYRM 300 >UniRef50_B1ZZ77 Dihydrouridine synthase DuS n=2 Tax=Opitutaceae RepID=B1ZZ77_OPITP Length = 384 Score = 76.3 bits (186), Expect = 9e-13, Method: Composition-based stats. Identities = 7/98 (7%), Positives = 28/98 (28%), Gaps = 1/98 (1%) Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 + V + ++ ++ R+ + + + + P++A+G Sbjct: 153 FDDTTPFEPMLDLVNAHRVDLLSVHGRTVKEMYRSRVHYDFIARAVQRVRCPVLANGNVT 212 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + + R+ G + + + + Sbjct: 213 SAPRAVAILRETGAAGVMIGRHAIRNPWIFRQCRELFH 250 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 4/111 (3%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVID 74 VK + + + D L + T V +++R + + Sbjct: 145 FTVKMRIGFDDTTPFEP--MLDLVNAHRVDLLSVHGRTVKEMYRSRVHYDFIARAVQRVR 202 Query: 75 IPFCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 P G + S A + GA + I A+ +P + + + F Sbjct: 203 CPVLANGNVTSAPRAVAILRETGAAGVMIGRHAIRNPWIFRQCRELFHPPP 253 >UniRef50_O53835 Probable tRNA-dihydrouridine synthase n=107 Tax=Actinobacteria (class) RepID=DUS_MYCTU Length = 389 Score = 76.3 bits (186), Expect = 9e-13, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 47/175 (26%), Gaps = 4/175 (2%) Query: 84 KSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK-YH 141 + A I G AD I +N + + G + Sbjct: 97 TTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTD 156 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC 200 + LD + + GA + L+ +G D EQ+ ++++ Sbjct: 157 IPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAAQRYSGTADWEQIARLKQHV 216 Query: 201 H-VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 +P++ +G L DG + + EL A Sbjct: 217 RTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAP 271 Score = 48.2 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 47/160 (29%), Gaps = 4/160 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + + + EGA + + TA+ D ++R+ + + Sbjct: 158 PVTVKFRIGIDDAHHTH-LDAGRIAEAEGAAAVALHARTAAQRYSGTADWEQIARLKQHV 216 Query: 74 D-IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 IP G I DA ++S G D + I L P L L+ F Sbjct: 217 RTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTL 276 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 A+ + H + + + A Sbjct: 277 GEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPA 316 >UniRef50_Q2FS89 Histidine biosynthesis n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FS89_METHJ Length = 226 Score = 76.3 bits (186), Expect = 9e-13, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 71/249 (28%), Gaps = 36/249 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII------GDIVPLAKRYAEEGADELVFYDITASSD 57 + D++ G++V G + D + + L D+ Sbjct: 1 MDLYLATDLKSGKIVHGKSGMRDRYVPVTSLHADTAEPIRFIEQMKPRFLYIADLDR-IC 59 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G + +AE + +L G + Sbjct: 60 GTGDHDPLIPELAERTE---------------RILLDRGCKGP-------------YDML 91 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 D FGV IV V + + ++ + ++L Sbjct: 92 DIFGVSMIVGTETAADTLAQFTKGVLSVDIKNDLVIPWNIDPVTFLSTCNRYRFEMVILL 151 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + + G G D E L + REV PL+ GG + E A DGA+ A+ H Sbjct: 152 DIGRVGTGRGLDKEMLSQFREVYTGPLLWGGGVSSEEDL-ALLEKAGFDGAIIATAVHSG 210 Query: 238 IINIGELKA 246 I + ++ Sbjct: 211 KIPVEYIRR 219 >UniRef50_Q0CMD2 TRNA-dihydrouridine synthase 1 n=18 Tax=Leotiomyceta RepID=Q0CMD2_ASPTN Length = 536 Score = 76.3 bits (186), Expect = 9e-13, Method: Composition-based stats. Identities = 24/204 (11%), Positives = 63/204 (30%), Gaps = 14/204 (6%) Query: 48 VFYDITASSDGRVVDKSWV---SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 F+ T ++ G+ D ++ + + + FC +AA+ ++ D + +N Sbjct: 92 HFHP-TRAAVGKDDDAPYLDGNPAIDRPLFVQFCAN-NPDDFLEAAQHVAPYCDAVDLNL 149 Query: 105 PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 + + + R ++ +TL++ + Sbjct: 150 GCPQGIAKRGHYGSFLQED----WDLIYKLINKLHTELPIPVTAKFRILESKEKTLEYAK 205 Query: 165 EVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREV--CHVPLIASGGAGTMEHFLEA 219 + GA I L+ ++ + D ++ +R+ + A+G + Sbjct: 206 MILSAGASIITLHGRTREQKGHNTGVADWSYIRYLRDNLPPETVIFANGNNLNHDDLERC 265 Query: 220 FRDADVDGALAASVFHKQIINIGE 243 DG ++A + Sbjct: 266 LEATGADGVMSAEGNLSDPAIFSK 289 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IP 76 +FR E + AK GA + + T G D S++ + + + Sbjct: 190 KFRILESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGVADWSYIRYLRDNLPPETV 249 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITR 115 G + +D + L GAD + L+DP + ++ Sbjct: 250 IFANGNNLNHDDLERCLEATGADGVMSAEGNLSDPAIFSK 289 >UniRef50_B9YRZ8 Indole-3-glycerol-phosphate synthase n=3 Tax=Nostocaceae RepID=B9YRZ8_ANAAZ Length = 291 Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 65/232 (28%), Gaps = 40/232 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +AK Y GA + G + + I +P I Sbjct: 84 DPLAMAKSYERGGATCISVVTDQKFFQGG---FDHLRTIRHRIALPLLCKDFILDPCQIY 140 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 S GAD + + + L D + L + + Sbjct: 141 LARSAGADAVLLIAAILTDQEINNFLRVIHYLGMNAILEVH------------------- 181 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVR-------EVCHVP 203 + + ++ I +N + + +L +++ + + Sbjct: 182 -------NLTELDRLLKLEDVRIISINNRSLEDF--SVNLSTTQQLMAARRSHLQNLGIL 232 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 +++ G T +H DA V+ L +Q N+ E L V + Sbjct: 233 VVSESGIETSDHLS-LMADAGVNAVLMGDSLLQQ-ENLEEAVRSLIKPNVPV 282 >UniRef50_Q87N01 tRNA-dihydrouridine synthase C n=54 Tax=Gammaproteobacteria RepID=DUSC_VIBPA Length = 322 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 50/165 (30%), Gaps = 3/165 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 E+A + GA I +N A ++ ++ + ++ Sbjct: 76 WMAENAIRAAELGARGIDLNFGCPAKMVNKSKGGAALLQHPELIHSVVKACRDAVPANIP 135 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR--NGYDLEQLKKVREVCH 201 + + V +Q GA E+ ++ + G + E + K+RE Sbjct: 136 VSAKIRLGWE-NPEDCFEIVDAIQSAGANELTVHARTKQGGYKASEIKWEYINKIRERFS 194 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +PLIA+G E VD + +K Sbjct: 195 IPLIANGEIWNFEDGQRCIETTGVDSLMVCRGAFNIPNLGNMVKH 239 Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 5/110 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD--KSWVSRVAEVIDIP 76 K E D + GA+EL + T + + +++++ E IP Sbjct: 139 KIRLGW--ENPEDCFEIVDAIQSAGANELTVHARTKQGGYKASEIKWEYINKIRERFSIP 196 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCI 125 G I + ED + + G D + + A P L + Sbjct: 197 LIANGEIWNFEDGQRCIETTGVDSLMVCRGAFNIPNLGNMVKHNHTPMVW 246 >UniRef50_A6W1E8 Dihydrouridine synthase DuS n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W1E8_MARMS Length = 335 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 18/169 (10%), Positives = 43/169 (25%), Gaps = 2/169 (1%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 E A GA I +N A + +T + Sbjct: 95 MAESALNATKAGAKHIDVNFGCPAKRVNGHGGGSVLLQTPDALYDIMSAIRDTLPSDIPV 154 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVP 203 + D V ++ G G + ++ + E++ +++ + Sbjct: 155 SAKIRLG-FEDEALLFDNVAAIEAAGVGTLTIHGRTKKDGYKPPARWEKIGEIQAKTKMT 213 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 ++A+G + L + +++ L Q Sbjct: 214 VVANGDITDTKSLLRCQSITGCQHFMIGRGSLNNPFVFQQIRKELNGQE 262 Score = 53.2 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 27/107 (25%), Gaps = 4/107 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPF 77 K E + + G L + T + + + + Sbjct: 157 KIRLGFEDEAL--LFDNVAAIEAAGVGTLTIHGRTKKDGYKPPARWEKIGEIQAKTKMTV 214 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQ 123 G I + + S G I +L +P + ++ Q Sbjct: 215 VANGDITDTKSLLRCQSITGCQHFMIGRGSLNNPFVFQQIRKELNGQ 261 >UniRef50_Q4FQ57 Possible tRNA-dihydrouridine synthase n=24 Tax=Gammaproteobacteria RepID=Q4FQ57_PSYA2 Length = 350 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 43/167 (25%), Gaps = 1/167 (0%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 E+AA GA I IN A R + V+ + ++ Sbjct: 112 MAENAAHACELGAPAIDINFGCPAKTVNSHRGGSVLLDEPEVMYDIISAVRQAVPANIPV 171 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 T GA + ++ + + +P+ Sbjct: 172 SAKIRLGYTDTSRMDDIRGAIAAS-GADWLTIHARTKTQGYKPPAYWDKIQAFNSLKIPV 230 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 IA+G EH + + + I ++ L ++ Sbjct: 231 IANGEIWNSEHAQNCMAQSGTTHLMLGRGAVTRPDLIAQVDCGLDSE 277 Score = 50.5 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 5/108 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIPF 77 K D + A A GAD L + T + + + + IP Sbjct: 174 KIRLGYTDTSRMDDIRGA--IAASGADWLTIHARTKTQGYKPPAYWDKIQAF-NSLKIPV 230 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQC 124 G I + E A ++ G + + A+ P LI ++ + Sbjct: 231 IANGEIWNSEHAQNCMAQSGTTHLMLGRGAVTRPDLIAQVDCGLDSEM 278 >UniRef50_B8FH09 Dihydrouridine synthase DuS n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FH09_DESAA Length = 328 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 20/177 (11%), Positives = 52/177 (29%), Gaps = 5/177 (2%) Query: 70 AEVIDIPFCVAGGI-KSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVV 127 E+ + G + +++ AA+ + G + IN A + + Sbjct: 64 KELDHTVCQIFGSVPETMAKAAERIEAEGFFGVDINCGCSARAICRFDSGAALLAKPDLA 123 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRN 186 + V + + + + GA ++ + D Sbjct: 124 AQVVRAVRKAVNIPVIV--KFRTGWKDDPAHAVSMARLFCDEGADALIFHPRVAPDLRTR 181 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 E + V++ VP+ +G +++ + + DG + Q + + Sbjct: 182 PPKWEYIGLVKDAVKVPVFGNGNVISLDDAAKMLSMSGCDGVALGRIALAQPWIMAQ 238 Score = 72.4 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 10/165 (6%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSW 65 IP + VK V +A+ + +EGAD L+F+ A R + Sbjct: 136 IPVI-------VKFRTGWKD-DPAHAVSMARLFCDEGADALIFHPRVAPDLRTRPPKWEY 187 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQC 124 + V + + +P G + SL+DAAK+LS G D +++ ALA P ++ + + Sbjct: 188 IGLVKDAVKVPVFGNGNVISLDDAAKMLSMSGCDGVALGRIALAQPWIMAQWSQGMKPAL 247 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 A T + + + ++ Sbjct: 248 EDYKTAGAAMASFCAKRFEPRTAFLRFMKFSPYYCANFQFGHALH 292 >UniRef50_B6BT49 tRNA-dihydrouridine synthase A n=4 Tax=SAR11 cluster RepID=B6BT49_9RICK Length = 334 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 60/211 (28%), Gaps = 15/211 (7%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRL 116 K +S E + V G K E A G D+I+IN + Sbjct: 49 HGDRKKILSYSPEEKPLALQVGGSNKDELAEVAKIAEDMGYDEININLGCPSKKVQKNMF 108 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + +V + V T +++ +++ G +L Sbjct: 109 GACLMKEPDLVAECINSMVNSCNIPVTAKTRIGFDQTEDFDYLNNFIHKMRDAGTKTFIL 168 Query: 177 NMMNQDGVRNGY---------DLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVD 226 + + + ++++ + +I +GG + + D Sbjct: 169 HARKAMLTGLSPKQNLNIPKLNYNMVYEIKKKNPELEIIINGGISKVSEIDNHLKF--CD 226 Query: 227 GALAASVFHKQIINIGEL-KAYLATQGVEIR 256 G + ++ ++ E+ + T R Sbjct: 227 GVMIGRSIYQNPYSLIEIERDIFNTHNNPTR 257 >UniRef50_A4RVX6 Predicted protein n=2 Tax=Ostreococcus RepID=A4RVX6_OSTLU Length = 371 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 4/176 (2%) Query: 86 LEDAAKIL--SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 LE AA+ L A +I +N A+ V A+ + Sbjct: 79 LELAARHLATEKSAPRIDLNCGCPANVVTGKGAGSSLLRDPEYVYACVKAVADGARGSGA 138 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHV 202 T + + ++ GA + L+ + +G + E++ ++V + Sbjct: 139 HVTMKLRSGYDDSSLLRENLLAAREAGARFVSLHARTRAQGYSGRANWEEIAFAKDVLDI 198 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL-ATQGVEIRI 257 P++ +G + + E R +D DG + + + + A + +R+ Sbjct: 199 PVLGNGDVTSPQRAAELLRVSDADGIMLGRGAVQDPLIFRRIAATVSRDAQGVVRV 254 Score = 64.0 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 39/100 (39%), Gaps = 4/100 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + + E GA + + T + + ++ +V+DIP Sbjct: 143 KLRSGYDDSSLLR--ENLLAAREAGARFVSLHARTRAQGYSGRANWEEIAFAKDVLDIPV 200 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRL 116 G + S + AA++L AD I + A+ DP + R+ Sbjct: 201 LGNGDVTSPQRAAELLRVSDADGIMLGRGAVQDPLIFRRI 240 >UniRef50_C1F7P0 Indole-3-glycerol phosphate synthase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7P0_ACIC5 Length = 290 Score = 75.5 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 55/219 (25%), Gaps = 33/219 (15%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 LA+ GA L G + + + +P I + Sbjct: 96 PEWLARTLEANGAAVLSVLTDEPFFQGSLRNLEL---ASAATQLPCLRKDFIVDEYQIVE 152 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + AD I + AL D L + V+ Sbjct: 153 ARAHRADAILLIVAALTDEELARFTKAAHELDLDVLC----------------------- 189 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGGA 210 + T + + G +N + D+ L+ E+ + +A G Sbjct: 190 ----EVHTAGELARARDLGCDAYGVNNRDLVSFHVSLDVS-LQLAAELPQGAVHVAESGI 244 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 T E + R A L +Q L A L Sbjct: 245 HTAEDLQK-LRAAGFHAFLIGESLMRQPDPGAALAALLQ 282 >UniRef50_C5X8Y0 Putative uncharacterized protein Sb02g020430 n=1 Tax=Sorghum bicolor RepID=C5X8Y0_SORBI Length = 403 Score = 75.5 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 62/233 (26%), Gaps = 35/233 (15%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 D V +A+ Y + GA L G + V ++ P + Sbjct: 199 LRDHFDPVEIAQAYEKNGAACLSILTDEKHFQGSFENLEAVRN--SGVNCPLLCKEFVID 256 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + S GAD I + + L D + L Sbjct: 257 VWQIYYARSKGADAILLIAAVLPDIDITYFL--------------------------RVC 290 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL-----KKVREVC 200 V + + + ++ G I +N + + + + Sbjct: 291 KSLGMTALVEVHDEKELDRVLKIDGVELIGINNRSLGTFEVDTANTNMLLEKRGDIIKKK 350 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 + +++ G T + ++A V L Q G+ A L + + Sbjct: 351 RIQVVSESGLFTPDDV-AYVQNAGVFAVLVGESLVTQED-PGQAIAGLFGKEL 401 >UniRef50_B0XNW3 Dihydrouridine synthase family protein, putative n=4 Tax=Trichocomaceae RepID=B0XNW3_ASPFC Length = 541 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 22/190 (11%), Positives = 54/190 (28%), Gaps = 16/190 (8%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I A +AA+ ++ D + +N + Sbjct: 128 IVQFCANDPDDFLEAARHVAPYCDAVDLNLGCPQGIARKGHYGAFLQED----WDLIYKL 183 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLE 191 + + R + ++ +TL++ + + GA I L+ ++ + D Sbjct: 184 INRLHKELPIPVTAKFRIQESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGLADWS 243 Query: 192 QLKKVREV--CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI-------G 242 ++ +R+ + A+G + DG ++A Sbjct: 244 YIRYLRDNLPPETVIFANGNNLNHDDLERCLEATGADGVMSAEGNLSDPAIFSKPPPVGS 303 Query: 243 ELKAYLATQG 252 E + Y + Sbjct: 304 EGREYWRGRN 313 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IP 76 +FR E + AK GA + + T G D S++ + + + Sbjct: 198 KFRIQESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGLADWSYIRYLRDNLPPETV 257 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITR 115 G + +D + L GAD + L+DP + ++ Sbjct: 258 IFANGNNLNHDDLERCLEATGADGVMSAEGNLSDPAIFSK 297 >UniRef50_Q127F8 Dihydrouridine synthase, DuS n=7 Tax=Proteobacteria RepID=Q127F8_POLSJ Length = 344 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 47/165 (28%), Gaps = 2/165 (1%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 E+AA++ + G I +N A + + + Sbjct: 83 MAENAARLATLGPAGIDLNFGCPAAVVNRHGGGASLLKEPETLLAIVSAVRRAVPAGMPV 142 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVP 203 + + GAGE+V++ + E++ +R +P Sbjct: 143 SAKMRLGYNDDSRAVECALAIAEG-GAGELVVHARTKAQAYKPPAYWERIADIRAAVQIP 201 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 ++A+G T++ + + +KA + Sbjct: 202 VVANGEIWTVDDARRCREASGCSMLMIGRGAVADPGLGLAIKAAM 246 Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 4/94 (4%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K N V A AE GA ELV + T + + ++ + + IP Sbjct: 145 KMRLGYN--DDSRAVECALAIAEGGAGELVVHARTKAQAYKPPAYWERIADIRAAVQIPV 202 Query: 78 CVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 G I +++DA + G + I A+ADP Sbjct: 203 VANGEIWTVDDARRCREASGCSMLMIGRGAVADP 236 >UniRef50_D0MHI1 Indole-3-glycerol-phosphate synthase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHI1_RHOM4 Length = 273 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 62/223 (27%), Gaps = 36/223 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 ++ LA++Y GA + G + +D+P I Sbjct: 70 NVPELARQYKWHGAQAISVLTEPDYFQGS---LEHLEAARRTVDLPLLRKDFILDPYQIV 126 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + ++GAD + + + L DP + L + Sbjct: 127 EARAYGADAVLLIAA-LLDPVQLHELHA--------------------------MATELG 159 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL--IASG 208 + + + + + + + +N + + +V + +A Sbjct: 160 LSCLVEVHSESELDRLDLDKIEILGVNNRDLHTFEVDVNRAV--QVLRHVPERIVRVAES 217 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 G T + + R +D L F + GE L + Sbjct: 218 GLRTADELV-HLRRHGIDAVLIGEAFMRAPH-PGEALERLRRE 258 >UniRef50_Q8L940 Pyridoxal biosynthesis protein PDX1.3 n=173 Tax=cellular organisms RepID=PDX13_ARATH Length = 309 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 30/250 (12%), Positives = 66/250 (26%), Gaps = 15/250 (6%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT----ASSDG--RVVDKSW 65 V+ G +++ A+ E GA ++ + + G R+ D Sbjct: 25 VKVGLAQMLRGGVIMDVVN--AEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQM 82 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + + + + IP I +A + + G D S L + Sbjct: 83 IKEIKQAVTIPVMAKARIGHFVEAQILEAIGID-YIDESEVLTLADEDHHINKHNFRIPF 141 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD--- 182 V G +A + + ++ Sbjct: 142 VCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHVRSVNGDIRVLRNMDDDEVFTF 201 Query: 183 GVRNGYDLEQLKKVREVCHVPLI--ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + + + + +++ +P++ A+GG T DG S K Sbjct: 202 AKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADA-ALMMQLGCDGVFVGSGIFKSGDP 260 Query: 241 IGELKAYLAT 250 +A + Sbjct: 261 ARRARAIVQA 270 >UniRef50_B7K0H0 Indole-3-glycerol phosphate synthase n=18 Tax=cellular organisms RepID=TRPC_CYAP8 Length = 293 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 65/235 (27%), Gaps = 40/235 (17%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + E D V +A+ Y + GA L G + + V + +D+P Sbjct: 92 KGVIREDF-DPVAIAQAYVKGGASCLSVLTDAKFFQGSFENLALVR---QSVDLPLLCKE 147 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I + GAD + + + L+D L L Sbjct: 148 FILYPYQIYLARTKGADAVLLIAAILSDRDLSYFL------------------------- 182 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVR---- 197 + + + + G I +N N + DL+ ++ Sbjct: 183 -KIIQTLGMTALIEVHSLTELDRVLAIEGVSLIGINNRNLETF--EVDLKTTSQLLAARR 239 Query: 198 ---EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + + +I+ G T + + A DG L KQ + Sbjct: 240 DKIQALGIKIISESGLHTPDDLQ-FVQQAGSDGVLIGESLVKQPDPTQAIANLFG 293 >UniRef50_B0SXE6 TIM-barrel protein, nifR3 family n=2 Tax=Caulobacteraceae RepID=B0SXE6_CAUSK Length = 335 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 59/222 (26%), Gaps = 12/222 (5%) Query: 41 EEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVA-----GGIKSLEDAAKIL 93 GA + + GR V R A +P V + A Sbjct: 35 RLGAAYVATEMVACAEFARGRP---DAVRRAAVGDGLPLMVVQLVGRDPTFMGQGARMAA 91 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GA I +N + +A + + A V Sbjct: 92 EAGAQIIDLNFGCP-SKQVTGGVASGSALMREPDLAEALVAAAVRAVDVPVTVKMRLGWD 150 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 D + GA I ++ + G D + V+ VP++ +G Sbjct: 151 DDSRNAADIARRAVDAGAQAITVHGRTRCQFYKGVADWSAVAAVKAAVSVPVLVNGDIID 210 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + A + DG + + + ++A L +G Sbjct: 211 GDTARLALEQSGADGVMIGRGVYGRPWIAQAIEAALNGEGFR 252 Score = 74.4 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 3/109 (2%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDI 75 VK + + +A+R + GA + + T + D S V+ V + + Sbjct: 142 TVKMRLGWDD-DSRNAADIARRAVDAGAQAITVHGRTRCQFYKGVADWSAVAAVKAAVSV 200 Query: 76 PFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 P V G I + A L GAD + I P + + + Sbjct: 201 PVLVNGDIIDGDTARLALEQSGADGVMIGRGVYGRPWIAQAIEAALNGE 249 >UniRef50_D0J1P6 Dihydrouridine synthase, DuS n=7 Tax=cellular organisms RepID=D0J1P6_COMTE Length = 347 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 2/168 (1%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + E+AA + G + I +N A + + Sbjct: 75 VSMAENAANLARLGPEGIDLNFGCPAKVVNRHGGGASLLQDPEQIVRVVDAVRRAVPAQM 134 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCH 201 + + Q +++ GA EIV++ + E++ ++RE Sbjct: 135 PVSAKMRLG-FNDRALMTECAQAMEQGGACEIVVHARTKLDGYRPPAYWEEIPRIREAVG 193 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 V ++A+G T+E L + D + ++ + Sbjct: 194 VNVVANGEIWTVEEALRCREVSGCDDLMLGRGIVADPGLALAVRRAVE 241 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 4/132 (3%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K N + + A+ + GA E+V + T R + R+ E + + Sbjct: 139 KMRLGFNDRAL--MTECAQAMEQGGACEIVVHARTKLDGYRPPAYWEEIPRIREAVGVNV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I ++E+A + G D + + +ADP L + + + A Sbjct: 197 VANGEIWTVEEALRCREVSGCDDLMLGRGIVADPGLALAVRRAVEHGSVSAVAGIDWLAL 256 Query: 137 TGKYHVNQYTGD 148 + + Sbjct: 257 VPQVQRFWHMVC 268 >UniRef50_C8S7V0 HisA/hisF family protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7V0_FERPL Length = 223 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 88/253 (34%), Gaps = 43/253 (16%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLA----------KRYAEEGADELVFYDIT 53 ++ +DV+ G VV G + E + + + + E D+ Sbjct: 1 MKVYLAVDVKSGLVVWGKSGKRSEYV--PIERVSKVVRNSNLKEFFEELKVKRAYVADLD 58 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 +GR + + + +++ V GG KS+E+A Sbjct: 59 R-IEGRGSNLEVIDEIGRKVEL--IVDGGFKSVEEAL----------------------N 93 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 F + V +++ V + D S++ + E L+++ ++ + Sbjct: 94 RNFTPIFATETFDVRKLEGFESCMVSVDVKEKLLDASKSFGSLEELLEYLNSLKLKAVII 153 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + ++ + +D L+K ++ + +I GG E + ++ + G + + Sbjct: 154 LPIHSVGTYS----FDFSLLEKALDILNHKIITGGGLK-PEDL-DVVKEMGIYGVIVGTA 207 Query: 234 FHKQIINIGELKA 246 FH+ I+ + Sbjct: 208 FHQGKIDPEIVLR 220 >UniRef50_B6K3Q0 tRNA dihydrouridine synthase Dus3 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K3Q0_SCHJY Length = 617 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 29/273 (10%), Positives = 63/273 (23%), Gaps = 42/273 (15%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELV--FYDITASSDGRVVDKSWV 66 +D R+ + V +G+ + A GAD G + + V Sbjct: 232 VIDWRN----RMVL-APLTTVGNPA-FRQLCASFGADTFYSEMALCYPLMQGHQPEWALV 285 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGA-------------DKISINSPALADPTLI 113 V GI ++ A L G D + +N D Sbjct: 286 RGVESERQTMKTGRRGIFGIQLACGKLWQGVKTAQVLSEYCDGLDFLDLNCGCPIDLVYR 345 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + + + Sbjct: 346 QGAGSALLDNHTRLIRSLQGIDTISGSLPTTVKLRMGCRDDHPIAKRLMTRIFHETNVSA 405 Query: 174 IVLNMMNQDGVRNG-YDLEQLKKVR-------------------EVCHVPLIASGGAGTM 213 + L+ ++ + D + +++ + +I +G T Sbjct: 406 VTLHGRSRQQRYSKLADWDYVRQCATEIRTLNEALEEKPDAFPMRNQRMAVIGNGDCFTY 465 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + + VD + A + E++A Sbjct: 466 KDWYDGME-TGVDTVMIARGALVKPWIFEEIEA 497 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 23/204 (11%), Positives = 54/204 (26%), Gaps = 24/204 (11%) Query: 10 LDVRDG---QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSW 65 +D G VK + + + + E + + + ++ D + Sbjct: 366 IDTISGSLPTTVKLRMGCRDDHPIAKRLMTRIFHETNVSAVTLHGRSRQQRYSKLADWDY 425 Query: 66 VSRVAEVID-------------------IPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 V + A I + G + +D + G D + I A Sbjct: 426 VRQCATEIRTLNEALEEKPDAFPMRNQRMAVIGNGDCFTYKDWYDGMETGVDTVMIARGA 485 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 L P + + + E + ++ + DE T+ L+++ Sbjct: 486 LVKPWIFEEI-EARQSIDKSSTQRLEMLQEFCNHGLSYWGADERGLNTTRRFFLEFMSFF 544 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDL 190 + + +N Sbjct: 545 HRYTPVAMYEEGVNPKLNERAPAY 568 >UniRef50_Q9CJW1 tRNA-dihydrouridine synthase C n=7 Tax=Gammaproteobacteria RepID=DUSC_PASMU Length = 312 Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 52/168 (30%), Gaps = 4/168 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E+A + + G+ I +N + + Q ++ T + Sbjct: 78 AENAQRAIELGSHGIDLNCGCPSKTVNGSNGGASLLKQPELIYHATKALRAAVPKALPVS 137 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--GYDLEQLKKVREVCHVP 203 + + + VQ+ GA EI ++ + + ++ VR+ +P Sbjct: 138 VKVRLGWDNS-EQAFEIADAVQQGGATEITIHGRTKMDGYRADRINWAKINDVRQRLSIP 196 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 +IA+G + + + N+ ++ + + Sbjct: 197 VIANGEIWDWQSGQACLAETGCQDLMIGRGALNIP-NLSQVVKFNQAK 243 Score = 66.3 bits (160), Expect = 9e-10, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 42/144 (29%), Gaps = 5/144 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRVAEV 72 VK + +A + GA E+ + T R ++ + ++ V + Sbjct: 135 PVSVKVRLGWD--NSEQAFEIADAVQQGGATEITIHGRTKMDGYRADRINWAKINDVRQR 192 Query: 73 IDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + IP G I + L G + I AL P L + + Sbjct: 193 LSIPVIANGEIWDWQSGQACLAETGCQDLMIGRGALNIPNLSQVVKFNQAKMPWAEVLIL 252 Query: 132 WYDAETGKYHVNQYTGDESRTRVT 155 + + + +R + Sbjct: 253 LHQYAHTENQFDTGFYHVARIKQW 276 >UniRef50_B8C4H3 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C4H3_THAPS Length = 333 Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 27/193 (13%), Positives = 60/193 (31%), Gaps = 7/193 (3%) Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITR 115 R ++ + G L A K+L D + IN + R Sbjct: 38 KYREKFWKIEGMPSQDRPLIAQFCGHDKNVLLQAMKVLEPHVDGVDINCGCPQNIAKRGR 97 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + I T +V ++L + + GA + Sbjct: 98 YGAFLMEEDNGDKIVEIVQHLTANLNVPVSVK-LRILPTGIEDSLALYKRLVDAGAAMLT 156 Query: 176 LNMMNQDGVR---NGYDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALA 230 ++ + + + + +++V ++ VP+IA+G ++ + F VDG ++ Sbjct: 157 IHGRTRFQNKVDTGTANWDYIRQVVDLVGDRVPVIANGNICNLDEVRKCFEVTGVDGVMS 216 Query: 231 ASVFHKQIINIGE 243 + + E Sbjct: 217 SEGILEYPPLFTE 229 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 8/107 (7%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAE 71 VK I D + L KR + GA L + T D + ++ +V + Sbjct: 125 PVSVKLRI--LPTGIEDSLALYKRLVDAGAAMLTIHGRTRFQNKVDTGTANWDYIRQVVD 182 Query: 72 VID--IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITR 115 ++ +P G I +L++ K G D + + L P L T Sbjct: 183 LVGDRVPVIANGNICNLDEVRKCFEVTGVDGVMSSEGILEYPPLFTE 229 >UniRef50_C6J447 Indole-3-glycerol phosphate synthase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J447_9BACL Length = 279 Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 60/225 (26%), Gaps = 34/225 (15%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 V LA Y G D + G ++S + E +++P + Sbjct: 68 RPDFHPVQLAAAYEAAGTDCISVLTDETYFQGSGA---YLSAIREAVNVPLLRKDFVIDE 124 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + GAD + + + L+D L L+ + + + + Sbjct: 125 RQIYEARLLGADAVLLIAAILSDAQLRDYLSIATALGLDALIEVHDREELERVLMLPA-- 182 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH--VPL 204 A I +N N LE + E+ L Sbjct: 183 ------------------------AKLIGINNRNLRTF--EVSLETTAALAELVPSSATL 216 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 I+ G T + + + G L F ++ + + Sbjct: 217 ISESGIQTRQDV-KYLQQTGAQGVLIGETFMRRENVGDAVVDLMG 260 >UniRef50_C6A2A3 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Thermococcus sibiricus MM 739 RepID=GGGPS_THESM Length = 255 Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 63/217 (29%), Gaps = 8/217 (3%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LAK E G D ++ T + V V + E +P + G S +K Sbjct: 37 KLAKISEEVGVDAIMVGGSTGAE--GEVLDGVVKAIKENSSLPVILFPG--SHGGLSKYA 92 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 +NS L + I Y + R Sbjct: 93 DAVFFMSLLNSRNPFFIAGAQALGAFRVKHYGIEPIPMAYLVVEPGETAGWVSDANLIPR 152 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 + Q G + L + E +K V+ VPLI GG T Sbjct: 153 HKPKIAAAYALAGQYMGMRLVYLEAGSGAP--EHIPNEMIKVVKSAIDVPLIVGGGIRTY 210 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 E E + + D + + ++ ++ E K L + Sbjct: 211 EDAKEVVQ-SGADIIVTGTAI-EKAGSLEESKKRLES 245 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 A G + + + + + V ID+P V GGI++ EDA + Sbjct: 158 AAAYALAGQYMGMRLVYLEAGSGAPEHIPN--EMIKVVKSAIDVPLIVGGGIRTYEDAKE 215 Query: 92 ILSFGADKISINSP 105 ++ GAD I + Sbjct: 216 VVQSGADIIVTGTA 229 >UniRef50_Q2SJJ8 TRNA-dihydrouridine synthase n=7 Tax=Gammaproteobacteria RepID=Q2SJJ8_HAHCH Length = 349 Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 65/208 (31%), Gaps = 15/208 (7%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADP 110 T + + ++ AE I + G E A +G D+I++N +D Sbjct: 53 TGAIIHGDRN-RFLDFNAEEHPIAVQLGGSNPDELKECAKICEDWGYDEINLNVGCPSDR 111 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + V V + ++ L++V+ V+ G Sbjct: 112 VQNNMIGACLMGYPERVAECVAAMCSAVSIPVTVKHRIGIDDQDSEEFLLNFVRTVKAAG 171 Query: 171 AGEIVLNMMNQDGVRNGYD---------LEQLKKVRE-VCHVPLIASGGAGTMEHFLEAF 220 +++ + +++ + +I +GG TM+ Sbjct: 172 CSTFIIHARKAILKGLSPKENREIPPLIYPRAYLIKQTFPELEIIINGGIKTMDESESHL 231 Query: 221 RDADVDGALAASVFHKQIINIGELKAYL 248 ++ VDG + +++ + ++ L Sbjct: 232 QE--VDGVMIGREAYQRPWMLADVDHRL 257 Score = 47.8 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 12/123 (9%) Query: 15 GQVVKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------RVVDKS 64 VK + + + + + G + + A G + Sbjct: 142 PVTVKHRIGIDDQDSEEFLLNFVRTVKAAGCSTFIIHARKAILKGLSPKENREIPPLIYP 201 Query: 65 WVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + + + GGIK+++++ L D + I A P ++ + R Sbjct: 202 RAYLIKQTFPELEIIINGGIKTMDESESHLQE-VDGVMIGREAYQRPWMLADVDHRLFHC 260 Query: 124 CIV 126 Sbjct: 261 PPP 263 >UniRef50_O83945 Probable tRNA-dihydrouridine synthase n=4 Tax=Treponema RepID=DUS_TREPA Length = 340 Score = 74.4 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 21/198 (10%), Positives = 43/198 (21%), Gaps = 15/198 (7%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD-----KISINSPALADPTLITRLAD 118 + R + + G + A+ D I IN+ T Sbjct: 65 RLIRRASNETHYAIQIFG--SNPAVMAETAKLIVDSAQPSCIDINAGCPMPKITKTGAGA 122 Query: 119 RFGVQC---IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + V + + + + GA + Sbjct: 123 ALTREPTRLYEVVKAVADAVYAQDARIPVTVKIRAGWEEAHLTWKEAARAAVDAGAQALA 182 Query: 176 LNMMNQDGVRNG-YDLEQLKKVREVCH----VPLIASGGAGTMEHFLEAFRDADVDGALA 230 L+ G + + + + + VP+ SG E G + Sbjct: 183 LHPRTCAQCYAGEANWDIIADLVQCARGWGEVPVFGSGDLHAPEDARAMLEHTACAGVMF 242 Query: 231 ASVFHKQIINIGELKAYL 248 A + + L Sbjct: 243 ARGAMGNPFIFRQTRQLL 260 Score = 40.9 bits (94), Expect = 0.049, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 40/136 (29%), Gaps = 7/136 (5%) Query: 11 DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRV 69 D R VK + A+ + GA L + T + + ++ + Sbjct: 146 DARIPVTVKIRAGWEEAHLT-WKEAARAAVDAGAQALALHPRTCAQCYAGEANWDIIADL 204 Query: 70 AEVI----DIPFCVAGGIKSLEDAAKILSFGAD-KISINSPALADPTLITRLADRFGVQC 124 + ++P +G + + EDA +L A + A+ +P + + Sbjct: 205 VQCARGWGEVPVFGSGDLHAPEDARAMLEHTACAGVMFARGAMGNPFIFRQTRQLLTEGY 264 Query: 125 IVVGIDTWYDAETGKY 140 + Sbjct: 265 YTPVTFEQKLRAAWRE 280 >UniRef50_A6C0W3 HisA/HisF family protein, putative n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C0W3_9PLAN Length = 247 Score = 74.4 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 76/246 (30%), Gaps = 22/246 (8%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEE-GADELVFYDIT 53 +IIP LD+ + +V+G+ + + +A+ +E G E D+ Sbjct: 1 MKIIPVLDILNQTIVRGIAGQRETYQPIQSGLTHSSQPLDIAQALQDEFGFSEFYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A R+ + + + F + G+ D+ + I L P + Sbjct: 61 AILQQRL-NLQMYQCLLDA-GFTFLLDCGLHFAGDSQPLSKMKGITIVAGLETLESPQEL 118 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 +L +G V +D + + ++G + Sbjct: 119 KQLVQNWGAASTVFSLDLKQGKPVRNSSSDNPYAAIDDPLEIAELS-------LQQGVNQ 171 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVRE--VCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 ++L + G G E L + + LI GG +++ D L A Sbjct: 172 MILLDLANVGTGQGTGTEALCRTLRSHHPDLRLITGGGIHSIDDLQTQAEQ-GADAVLVA 230 Query: 232 SVFHKQ 237 S H Sbjct: 231 SALHDG 236 >UniRef50_B8DIS9 Dihydrouridine synthase DuS n=2 Tax=Desulfovibrionales RepID=B8DIS9_DESVM Length = 383 Score = 74.4 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 60/216 (27%), Gaps = 26/216 (12%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVS 67 +D+ VK V LA+R+ + GAD LVF+ A + ++ + Sbjct: 170 AVDI--PVFVKFRTGW-SPDPQPAVDLARRFEDAGADCLVFHPRVAPDRRTQPPRRAHIG 226 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIV 126 V + IP G + + ED A +L G D +S+ A+A P + Sbjct: 227 LVKAAVSIPVMGNGDVFTPEDCANLLDDTGCDGVSLGRIAVARPWVFAAWTGMVDDDPDR 286 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG---AGEIVLNMMNQDG 183 + + G R+ + + + Sbjct: 287 NPAPWREAPLALLDALARRHGPARAVRMFGKFLVYITGNFTYGNGLRGRLLRVTGRTPAS 346 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 GG ++ L A Sbjct: 347 FGADDP------------------GGLRALQDALRA 364 Score = 74.0 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 17/159 (10%), Positives = 39/159 (24%), Gaps = 3/159 (1%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 E A ++ + G + +N + + Sbjct: 118 MAEGARRVQAEGFFGVDLNMGCSVSAIIKRGCGADLLRDPERAVRMVAAVRRA--VDIPV 175 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVP 203 + + +D + + GA +V + D + V+ +P Sbjct: 176 FVKFRTGWSPDPQPAVDLARRFEDAGADCLVFHPRVAPDRRTQPPRRAHIGLVKAAVSIP 235 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 ++ +G T E D DG + + Sbjct: 236 VMGNGDVFTPEDCANLLDDTGCDGVSLGRIAVARPWVFA 274 >UniRef50_P49572 Indole-3-glycerol phosphate synthase, chloroplastic n=39 Tax=cellular organisms RepID=TRPC_ARATH Length = 402 Score = 74.4 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 30/230 (13%), Positives = 63/230 (27%), Gaps = 38/230 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A+ Y + GA L G + + + + P + Sbjct: 201 DPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIR--SAGVKCPLLCKEFVVDPWQIY 258 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD + + + LAD + + Sbjct: 259 YARTKGADAVLLIAAVLADLEITF--------------------------LLKICKKLSL 292 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL-------EQLKKVREVCHVP 203 V + + + + G + +N + + E +++RE + Sbjct: 293 AALVEVHDEREMGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMI- 351 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 ++ G T + + A V L KQ + A L + + Sbjct: 352 VVGESGLFTPDDI-AYVQAAGVKAVLVGESIVKQND-PEKGIAGLFGRNI 399 >UniRef50_UPI00015B6197 PREDICTED: similar to CG10463-PA n=1 Tax=Nasonia vitripennis RepID=UPI00015B6197 Length = 584 Score = 74.4 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 24/207 (11%), Positives = 57/207 (27%), Gaps = 10/207 (4%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDAAK 91 + E GAD G + + V R +AG G+ + Sbjct: 307 RICKEFGADITCGEMALAPRLLKGVREEWALVKRHESEDLFGVQIAGNNPGVLTRCCQLL 366 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 D + +N D + ++ E + + Sbjct: 367 NDETEVDFVDLNVGCPIDLVYKQGGGCGMLNRLNILESVVKSATEV--LDIPFTVKTRTG 424 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-VCHVPLIASGG 209 + + + + GA I ++ +++ D + ++K + +P+ +G Sbjct: 425 VYADKPIAHKLMSKFKDWGASMINIHGRSREQRYTKLADWDYIEKCAQVASPIPVYGTGD 484 Query: 210 AGTMEHFLEAFR-DADVDGALAASVFH 235 + + + + V G A Sbjct: 485 ILSWDDYQRVRKTYPTVQGVSIARGAL 511 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 9/90 (10%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASS-DGRVVDKSW 65 LD+ VK + L ++ + GA + + + ++ D + Sbjct: 412 VLDI--PFTVKTRTG---VYADKPIAHKLMSKFKDWGASMINIHGRSREQRYTKLADWDY 466 Query: 66 VSRVAE-VIDIPFCVAGGIKSLEDAAKILS 94 + + A+ IP G I S +D ++ Sbjct: 467 IEKCAQVASPIPVYGTGDILSWDDYQRVRK 496 >UniRef50_A9V4A0 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V4A0_MONBE Length = 1116 Score = 74.4 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 49/162 (30%), Gaps = 6/162 (3%) Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 ++ AA+IL D I +N + V + Sbjct: 112 VEDFVAAAQILEPFVDAIDLNLGCPQNTAKREGFGAYLMDDLPRVEAMLRAARAVLHKPI 171 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG--VRNGYDLEQLKKVREVC 200 + R T T ++Q ++ G I ++ + + D +++ R+ Sbjct: 172 ----TAKVRLFPTLTATRAYLQMLEAAGCSLIAIHARLRGQRHHQGQPDFAMVREARDAV 227 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +PL+ +GG ++ V G + A + Sbjct: 228 DIPLLVNGGVRSLRQAESVLEYTGVAGVMVAGALLELPRLFA 269 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 41/160 (25%), Gaps = 6/160 (3%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV--VDKSWVSRV 69 + K F + + G + + D + V Sbjct: 167 LHKPITAKVRLF---PTLTATRAYLQMLEAAGCSLIAIHARLRGQRHHQGQPDFAMVREA 223 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVG 128 + +DIP V GG++SL A +L + G + + L P L D + + Sbjct: 224 RDAVDIPLLVNGGVRSLRQAESVLEYTGVAGVMVAGALLELPRLFAGQMDLARLADARLY 283 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + + V + + Sbjct: 284 LQYAERYPPPAIRYVRDHLMTLLKPVLYAHLWLDLYNLVN 323 >UniRef50_Q9NX74 tRNA-dihydrouridine synthase 2-like n=35 Tax=Metazoa RepID=DUS2L_HUMAN Length = 493 Score = 74.4 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 68/232 (29%), Gaps = 29/232 (12%) Query: 41 EEGADELV---FYDITASSDGRVVDK------------SWVSRVAEVIDIPFCVAGGIKS 85 + GAD + D+ RVV++ V R E G Sbjct: 33 DYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRVVFRTCEREQNRVVFQMGTSD 92 Query: 86 LEDA---AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 E A A+++ I +N + + + + + V Sbjct: 93 AERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLSDPDKIEKILSTLVKGTRRPV 152 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH 201 + R + +TL V+ +++ G I ++ ++ E +K + + Sbjct: 153 ----TCKIRILPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQHPVSCEVIKAIADTLS 208 Query: 202 VPLIASGG----AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +P+IA+GG + + + A LK L Sbjct: 209 IPVIANGGSHDHIQQYSDIEDFRQATAASSVMVARAAMWNPSIF--LKEGLR 258 Score = 61.7 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 44/160 (27%), Gaps = 12/160 (7%) Query: 3 AKRIIPCLDVRD---GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG- 58 I V+ K + D + L KR G + + Sbjct: 136 KIEKILSTLVKGTRRPVTCKIRI---LPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQ 192 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGG----IKSLEDAAKILSF-GADKISINSPALADPTLI 113 V + +A+ + IP GG I+ D A + + A+ +P++ Sbjct: 193 HPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVMVARAAMWNPSIF 252 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + R + + I + + R + Sbjct: 253 LKEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQ 292 >UniRef50_A8J281 Predicted protein (Fragment) n=3 Tax=cellular organisms RepID=A8J281_CHLRE Length = 241 Score = 74.4 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 51/164 (31%), Gaps = 4/164 (2%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AA+ L+ A +I +N A+ + + +T Sbjct: 76 AAQYLAERAPRIDLNCGCPANTVTGNGAGSSLLRTPQRIHDIVSAMVAGVRASAAPHTPV 135 Query: 149 ESRTRVTQWETLDWVQEV---QKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPL 204 + R +T + + Q+ GA I L+ + +G D + ++ VP+ Sbjct: 136 SVKLRAGFDDTSLFEDNLLAAQEAGASFITLHPRTKRQCYDGAADWSLTARAVQLLRVPV 195 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 I +G +E R G + + + ++ Sbjct: 196 IGNGDVVCVERAHALLRQTGCHGVMVGRGAVQDPLLFHRIRHSF 239 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 4/108 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI 73 VK + + + E GA + + T D S +R +++ Sbjct: 134 PVSVKLRAGFDDTSLFE--DNLLAAQEAGASFITLHPRTKRQCYDGAADWSLTARAVQLL 191 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRF 120 +P G + +E A +L G + + A+ DP L R+ F Sbjct: 192 RVPVIGNGDVVCVERAHALLRQTGCHGVMVGRGAVQDPLLFHRIRHSF 239 >UniRef50_Q1CZH5 Indole-3-glycerol phosphate synthase n=2 Tax=Cystobacterineae RepID=Q1CZH5_MYXXD Length = 262 Score = 74.4 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 67/221 (30%), Gaps = 34/221 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D+V +A+ Y GA + G + V + +P + + + Sbjct: 68 DVVAVARAYEAAGASAISVLTDGPDFGGS---LEDLVAVRAAVSLPVLRKDFLVAAREVE 124 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + +GAD + + + AL D + Sbjct: 125 ESAQWGADAVLLIADALED---------------------------GELREMVATAKAVG 157 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR--NGYDLEQLKKVREVCHVPLIASG 208 + + T + GA + +N N ++ G L + +R V L+A Sbjct: 158 VAALVEAHTEAHAERALAAGAKLVGINNRNLATLKTDTGTALRVMPNLRSRARV-LVAES 216 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G ++ + A ++A D L ++ L+ L Sbjct: 217 GLKSLADLVAA-QEAGADAVLVGESLLREPDPGHALRRLLG 256 >UniRef50_D0LY25 TIM-barrel protein, yjbN family n=3 Tax=Bacteria RepID=D0LY25_HALO1 Length = 376 Score = 74.4 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 53/216 (24%), Gaps = 21/216 (9%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED----AAKILSFGADKISINS 104 T R + I + G E A +G D++++N Sbjct: 73 IVTGTIIHGDRPRYLDFSEA---EHPIALQLGGD--DAEALATCARIAEDWGYDEVNLNV 127 Query: 105 PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 + + VV V R + ++V+ Sbjct: 128 GCPSSRVSSGSFGACLMARPEVVARAVEAMRAAVAIPVTVKHRIGIDDRDRYEDMREFVR 187 Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDL----------EQLKKVREVCHVPLIASGGAGTME 214 V + GA ++ + + RE H+P+ +GG ++ Sbjct: 188 VVAEAGADRFSVHARKAWLSGLSPKENREVPPLRYADVHRLKREFPHLPIEINGGIVDLD 247 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 E VD + + E A Sbjct: 248 SAQEQLAH--VDAVMIGRAAYNTPWIFAEADARFFG 281 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 42/133 (31%), Gaps = 19/133 (14%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI-IGDIVPLAKRYAEEGADELVFYDITASSDG- 58 M A IP VK + D+ + AE GAD + A G Sbjct: 157 MRAAVAIPV-------TVKHRIGIDDRDRYEDMREFVRVVAEAGADRFSVHARKAWLSGL 209 Query: 59 --------RVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 + + V R+ +P + GGI L+ A + L D + I A Sbjct: 210 SPKENREVPPLRYADVHRLKREFPHLPIEINGGIVDLDSAQEQL-AHVDAVMIGRAAYNT 268 Query: 110 PTLITRLADRFGV 122 P + RF Sbjct: 269 PWIFAEADARFFG 281 >UniRef50_A4HAN2 Putative uncharacterized protein n=3 Tax=Leishmania RepID=A4HAN2_LEIBR Length = 512 Score = 74.4 bits (181), Expect = 4e-12, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVIDI 75 VVK + + + V A++ GA L + +A+S V + E + + Sbjct: 266 VVKMRI---KDDLRNSVDFARQCEAAGASWLTVHGRSATSQPSAAVQFEAVKLIRENLSV 322 Query: 76 PFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLIT 114 P + GG++ + A L G + + L +P + Sbjct: 323 PVVLNGGVRDVSTAMEAALRTGCGGLMSANGLLDNPAMFY 362 Score = 66.3 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 56/180 (31%), Gaps = 22/180 (12%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC------------------- 124 +AA +L D I +N + + Q Sbjct: 182 TDAAEAALLLRPYCDAIDLNCGCPQRWAMKDGIGAVLLDQPERVADMVRSIRNAMPDGNT 241 Query: 125 --IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 ++V I + + R + ++D+ ++ + GA + ++ + Sbjct: 242 APMMVSIGGACSSCPATAPPFLPCVVKMRIKDDLRNSVDFARQCEAAGASWLTVHGRSAT 301 Query: 183 GVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 + E +K +RE VP++ +GG + +EA G ++A+ Sbjct: 302 SQPSAAVQFEAVKLIRENLSVPVVLNGGVRDVSTAMEAALRTGCGGLMSANGLLDNPAMF 361 >UniRef50_Q5CRK5 Ylr401cp-like protein with 2 CCCH domains plus Dus1p tRNA dihydrouridine synthase Tim barrel n=2 Tax=Cryptosporidium RepID=Q5CRK5_CRYPV Length = 707 Score = 74.0 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 26/260 (10%), Positives = 60/260 (23%), Gaps = 52/260 (20%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG-----IKSLEDA 89 + + GAD V G+ + + + + E +AGG IK+ E Sbjct: 333 RLCLKFGADVTVSEMVLCNEILSGKASELALLKKSPEEKYFGIQLAGGNKSTIIKTGEFI 392 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQ----------------------CIVV 127 + D I IN+ + + + Sbjct: 393 NEHCE--FDFIDINAACPLKSLHDKGAGSILVDRVSELETMVKGLKKVMDGKLVTVKVRM 450 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN- 186 + + +T + + G + ++ Sbjct: 451 SHGGSPINKNLSEKDYFENFENWPVIYHNMKTHKILNILCDSGIDALTIHGRTSFQRYTK 510 Query: 187 GYDLEQLKKVR---------------EVCHVP-----LIASGGAGTMEHFLEAFRDADVD 226 D +K + + +I G + + + ++ VD Sbjct: 511 EADWSYIKYCSVLNSKLYSNKVVNNIQNSNHSLICPSIIGCGDIINFQDYQQHIQNDLVD 570 Query: 227 GALAASVFHKQIINIGELKA 246 + + E+K Sbjct: 571 SVMIGRGALLKPWIFTEIKE 590 Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 33/133 (24%), Gaps = 22/133 (16%) Query: 34 PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA-----------------EVIDI 75 + + G D L + T+ + D S++ + + Sbjct: 484 KILNILCDSGIDALTIHGRTSFQRYTKEADWSYIKYCSVLNSKLYSNKVVNNIQNSNHSL 543 Query: 76 PF---CVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 G I + +D + + D + I AL P + T + + Sbjct: 544 ICPSIIGCGDIINFQDYQQHIQNDLVDSVMIGRGALLKPWIFTEIKENRNWDISASERFD 603 Query: 132 WYDAETGKYHVNQ 144 + Sbjct: 604 IIKQYVNLGLEHW 616 >UniRef50_Q1H0R8 Histidine biosynthesis n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H0R8_METFK Length = 234 Score = 74.0 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 67/246 (27%), Gaps = 37/246 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---IGDIVPLAKRYAEEGA-------DELVFYDIT 53 ++IP +D+ +G VV Q + ++ ++ GA L D+ Sbjct: 1 MQVIPVIDLMNGAVVHARQGNRAHYQPIVSNLCNGSEAQEIVGALLGLYPFPALYIADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFC-VAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 A R ++ + + V GI S+ + Sbjct: 61 AIQC-RNDHRTLIHTLLSKHPTLEIWVDAGINSVAKVQRWQ------------------- 100 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 R I + ++ + + + Sbjct: 101 ----HPRLRPVLGTESIPSIATWHLLAGACEGRHILSLDFTTAGYQGPSELLQEARHWPQ 156 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 +++ + G G D+++L R L A+GG R + GAL A Sbjct: 157 HVIIMSLPHVGSHAGPDMDKLTHFRALSPKHHLYAAGGIRDASDLQ-LLRKRGIKGALVA 215 Query: 232 SVFHKQ 237 S H Sbjct: 216 SALHNG 221 >UniRef50_Q72EB7 Dihydrouridine synthase family protein n=4 Tax=Desulfovibrio RepID=Q72EB7_DESVH Length = 332 Score = 74.0 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 16/173 (9%), Positives = 38/173 (21%), Gaps = 4/173 (2%) Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + + +AA+ + G + IN + Sbjct: 67 ERCVCQLFGADPSEMAEAARRVEAEGFFGVDINMGCSVAAIVRRGCGADLLRDEERAVRM 126 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD- 189 + + + + GA +V + R Sbjct: 127 VESVRRA--VDCPVLVKFRTGWSPDPQGAVALARRFEDAGADALVFHPRVAPDRRTRPPL 184 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 ++ V+E +P++ +G T DG + + Sbjct: 185 RHHIRLVKEAVAIPVLGNGEVFTPGDAASMLETTGCDGISLGRIALGRPWVFA 237 Score = 70.1 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 3/123 (2%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVA 70 V +VK V LA+R+ + GAD LVF+ A R + + V Sbjct: 134 VDCPVLVKFRTGW-SPDPQGAVALARRFEDAGADALVFHPRVAPDRRTRPPLRHHIRLVK 192 Query: 71 EVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 E + IP G + + DAA +L G D IS+ AL P + Sbjct: 193 EAVAIPVLGNGEVFTPGDAASMLETTGCDGISLGRIALGRPWVFAAWTGLVDDNPASNPD 252 Query: 130 DTW 132 Sbjct: 253 LWR 255 >UniRef50_A0B616 Histidine biosynthesis n=1 Tax=Methanosaeta thermophila PT RepID=A0B616_METTP Length = 227 Score = 74.0 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 73/252 (28%), Gaps = 38/252 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG-----------DIVPLAKRYAEEGADELVFYDI 52 R I +D+ + +VV V+ D + + + A E+ D+ Sbjct: 1 MRCIFVMDIYNSKVVHAVRGERSRYRSINTFSRVVSTPDPIEIIEILA---PKEVYVADL 57 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 G + + R++ GI +L D L +PT Sbjct: 58 NR-LSGSGDNLKTIERISSKA--ITMADIGISTLSDL---------------SLLPEPTT 99 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + + I D + + + ++ Sbjct: 100 PVLGTETASLDLISDASDLRDIVVSIDMKHRKVISHSGLLDPLELIKEMNDLDLLGI--- 156 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +L +++ G G D+E L P++ GG + A + V G L A+ Sbjct: 157 --ILLELDRVGTSAGVDIEFLSSAVASSDHPVLVGGGVRGLSDVH-ALEEIGVHGVLVAT 213 Query: 233 VFHKQIINIGEL 244 H + + I + Sbjct: 214 AVHSRAMPIEMI 225 >UniRef50_B9M3C8 Dihydrouridine synthase DuS n=2 Tax=Desulfuromonadales RepID=B9M3C8_GEOSF Length = 306 Score = 74.0 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 19/192 (9%), Positives = 50/192 (26%), Gaps = 2/192 (1%) Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 D ++ + + + + G + + + A + + P G Sbjct: 46 DLKEMAAAEKDVPLVVQLIGHGRDA-LVSAAEAAQATGAIHINLNMGCPYGRMTSGPTGG 104 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + + ++ + L + + +VL+ Sbjct: 105 GLLRHPEVLSEIIPSLRRVIKGTFSLKMRAGYDDPEQILRLLPLFEAAKVDFLVLHPRTV 164 Query: 182 DGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G D +V +P+IA+G T L+ + G + Sbjct: 165 LQQYQGLADHAITARVVRETEIPVIANGDIRTASAGLQLLEETGAAGLMLGRGAIADPFI 224 Query: 241 IGELKAYLATQG 252 L+ ++ Sbjct: 225 FQRLRQSAPSEP 236 Score = 69.7 bits (169), Expect = 8e-11, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 6/127 (4%) Query: 5 RIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-V 61 IIP L ++ +K + I+ L + D LV + T + Sbjct: 115 EIIPSLRRVIKGTFSLKMRAGYD--DPEQILRLLPLFEAAKVDFLVLHPRTVLQQYQGLA 172 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRF 120 D + +RV +IP G I++ ++L GA + + A+ADP + RL Sbjct: 173 DHAITARVVRETEIPVIANGDIRTASAGLQLLEETGAAGLMLGRGAIADPFIFQRLRQSA 232 Query: 121 GVQCIVV 127 + Sbjct: 233 PSEPDQH 239 >UniRef50_Q9VJ06 CG10495 n=12 Tax=Drosophila RepID=Q9VJ06_DROME Length = 396 Score = 74.0 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 45/147 (30%), Gaps = 3/147 (2%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW--VSRVAEVI 73 VK E + + LA++ G L + T + +S+V + + Sbjct: 150 VSVKMRLLGGEESLQRTIDLARQLESAGVTFLTLHGRTPAQKHSKDTLDIPAMSQVRQSL 209 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 IP V G ++S DA + GA + LA+P L + Sbjct: 210 QIPLIVNGNVESYRDACDMHEQTGAAGVMAARGLLANPALFNSNYPDGKTTPLSCVQQWL 269 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWET 159 A ++ T + + Sbjct: 270 DIASAAGDNLLFQCFHHHLTFMYSAQM 296 Score = 70.5 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 46/156 (29%), Gaps = 3/156 (1%) Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 A+++ D I +N + Q +V T + Sbjct: 96 AQLIYPYVDGIDLNCGCPQSWAMAKGYGCGMLRQPELVHQVVQEVRRTLPGDFSVSVKMR 155 Query: 150 S-RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ--LKKVREVCHVPLIA 206 + T+D ++++ G + L+ + L+ + +VR+ +PLI Sbjct: 156 LLGGEESLQRTIDLARQLESAGVTFLTLHGRTPAQKHSKDTLDIPAMSQVRQSLQIPLIV 215 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +G + + G +AA Sbjct: 216 NGNVESYRDACDMHEQTGAAGVMAARGLLANPALFN 251 >UniRef50_D1N0Y1 Dihydrouridine synthase DuS n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0Y1_9BACT Length = 334 Score = 74.0 bits (180), Expect = 5e-12, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 61/217 (28%), Gaps = 13/217 (5%) Query: 37 KRYAEEG---ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG----GIKSLEDA 89 +R A G D+ + + R + R E + + G I+ D Sbjct: 23 RRAARAGGCRFAFTEMVDVASLTYARERSAGMLRRGPEEEFLGVQLVGADHEFIRRAADV 82 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + N G AE ++ V Sbjct: 83 VNEYE--FSVVDFNLGCPVPKVAKKGAGAELGRHLDAALACFAIIAERSRHPVTA--KIR 138 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREV-CHVPLIAS 207 TL + + + GA I ++ ++ +G + ++ VRE V +IA+ Sbjct: 139 IVDAEDPAPTLALAKGLAELGAQAITVHGRIKEAFYSGPVNFGMIRAVREALPGVQVIAN 198 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 GG + E R+ + A EL Sbjct: 199 GGVTGRVKYQEIRRETGCSLVMLARGAMGNPWLFNEL 235 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 38/122 (31%), Gaps = 4/122 (3%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAE 71 R K + E + LAK AE GA + + + V+ + V E Sbjct: 130 RHPVTAKIRI-VDAEDPAPTLALAKGLAELGAQAITVHGRIKEAFYSGPVNFGMIRAVRE 188 Query: 72 VID-IPFCVAGGIK-SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + + GG+ ++ G + + A+ +P L L+ + Sbjct: 189 ALPGVQVIANGGVTGRVKYQEIRRETGCSLVMLARGAMGNPWLFNELSLGDAYVPPDIDE 248 Query: 130 DT 131 Sbjct: 249 WF 250 >UniRef50_Q4D174 Dihydrouridine synthase (Dus), putative n=2 Tax=Trypanosoma cruzi RepID=Q4D174_TRYCR Length = 548 Score = 73.6 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 51/177 (28%), Gaps = 9/177 (5%) Query: 71 EVIDIPFCV---AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 E D P V +L AA+ + + + +N Sbjct: 176 EETDHPLFVQFCGNDADTLLAAARHVEDDCEAVDVNLGCPQGIARRGHYGSFLMED---- 231 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 + + R TL + + ++ G + ++ + R Sbjct: 232 WDRVHNILHCLAVELRVPVTAKMRVFDDDALTLKYAEMLRDTGIAVLCVHGRTRHNKRGI 291 Query: 188 YDLEQLKKVREVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 D+E++++VRE +P+I +G T E DG + A Sbjct: 292 ADMEKIRRVREHLRGSIPVIGNGNVLTFEDVRRNMSATMTDGYMCAEPLLWDPRLFA 348 Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 6/105 (5%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSR 68 +++R K F + + + A+ + G L + T + + D + R Sbjct: 243 AVELRVPVTAKMRVFDDDAL---TLKYAEMLRDTGIAVLCVHGRTRHNKRGIADMEKIRR 299 Query: 69 VAEVI--DIPFCVAGGIKSLEDAAKILSFGA-DKISINSPALADP 110 V E + IP G + + ED + +S D P L DP Sbjct: 300 VREHLRGSIPVIGNGNVLTFEDVRRNMSATMTDGYMCAEPLLWDP 344 >UniRef50_B6A9H7 Dihydrouridine synthase family protein n=2 Tax=Eukaryota RepID=B6A9H7_9CRYT Length = 716 Score = 73.6 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 27/256 (10%), Positives = 59/256 (23%), Gaps = 49/256 (19%) Query: 37 KRYAEEGADELVFYDIT---ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + GAD + F ++T G+ + + + R +E +AGG + E AK Sbjct: 348 RLCVRLGAD-ITFSEMTLCNEILAGKSSELALLRRHSEERCFGIQLAGG--NFETIAKTG 404 Query: 94 S-----FGADKISINSPALADPTLITRLADRFGVQCI---------------------VV 127 D + IN + + Sbjct: 405 EFINEYCDYDFLDINVACPLKSLHDRGAGSILIDRPKLLESIITGLKKVIDKPLTIKLRM 464 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR-N 186 + + ++ + I+++ Sbjct: 465 ANSASPPNLKFYENTYINNPLNWDIIYSNMAAHKLIKPLVNYNINGIIIHGRTSSQRYNK 524 Query: 187 GYDLEQLKKVREVCHVP----------------LIASGGAGTMEHFLEAFRDADVDGALA 230 D L+ ++ LI G + + + DV+ + Sbjct: 525 SADWNYLRYCSKILKNEYLTYKDTNKNITYCPSLIGCGDVLNYCDYYKHLNEDDVNAVMI 584 Query: 231 ASVFHKQIINIGELKA 246 + E+K Sbjct: 585 GRGALLKPWIFTEIKE 600 >UniRef50_Q0BTY5 Indole-3-glycerol phosphate synthase n=16 Tax=Alphaproteobacteria RepID=Q0BTY5_GRABC Length = 305 Score = 73.6 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 49/223 (21%), Gaps = 31/223 (13%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 + LAK Y GA L G + + +P I Sbjct: 103 RPNFNPAELAKAYQVGGATCLSVLTDGPYFQGDP---DHLVAARAAVSLPVLRKDFILDP 159 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + + GAD I + AL D + + Sbjct: 160 WQIYESRAMGADCILLIMAALTD---------------------------DEARELEETA 192 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 + + + G I +N N ++ L+A Sbjct: 193 RHLDLDVLAEVHDEAELDRALALQTGLIGINNRNLKTLKTDLSTTLNIAPLLPPDRFLVA 252 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G T E V L +Q ++ + Sbjct: 253 ESGIRTHEDIQR-LAATGVRSFLVGESLMRQQDVTKAVRELIG 294 >UniRef50_D1N5U0 Dihydrouridine synthase DuS n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N5U0_9BACT Length = 288 Score = 73.6 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 15/169 (8%), Positives = 39/169 (23%), Gaps = 4/169 (2%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 AA+ + GA I++N + + + Sbjct: 62 AAAAARFMELGAAGINLNFGCPSRQVTSGGAGGGALRDLAGMVTTVETVKKAIPASPLSV 121 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD--LEQLKK-VREVCHV 202 + L+ E+ + +R V Sbjct: 122 KLRTGWESPD-EMQRILPALAETGCVSAFFLHFRTVREQYRPVSGREERFEAGLRLAAPV 180 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 P++ +G + + E G + A + + + + ++ Sbjct: 181 PVVLNGDIDSPDDASELLERTGAAGVMCARGWLRDPLLLNRIRQGRRDN 229 Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 11/120 (9%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEG-ADELVFYDITASSDGRVV- 61 K+ IP VK ++ + AE G + T R V Sbjct: 111 KKAIPA----SPLSVKLRTGWESPD--EMQRILPALAETGCVSAFFLHFRTVREQYRPVS 164 Query: 62 --DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 ++ + + + +P + G I S +DA+++L GA + L DP L+ R+ Sbjct: 165 GREERFEAGLRLAAPVPVVLNGDIDSPDDASELLERTGAAGVMCARGWLRDPLLLNRIRQ 224 >UniRef50_C9RM69 TIM-barrel protein, yjbN family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM69_FIBSS Length = 345 Score = 73.6 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 63/197 (31%), Gaps = 17/197 (8%) Query: 72 VIDIPFCVAG-GIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + G L A+K++ G ++++N +D + VV Sbjct: 61 EHPAVLQLGGSNPADLASASKLVEAAGFSEVNLNCGCPSDRVQNGNFGACLMKEKNVVAD 120 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY- 188 + V+ + D++Q V+ G +++ Sbjct: 121 CFKAMQDAVSIPVSIKCRIGVDDLDSWEFFTDFIQTVRDAGCKIFIVHARKAWLKGLSPK 180 Query: 189 --------DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 E + +++ E+ + L +GG T++ E +D DG + ++ Sbjct: 181 ENREVPPLHYEFVHRLKAEMPELNLSINGGIKTLDQIEEQLKDL--DGVMVGREAYENPW 238 Query: 240 NIGELKAYLATQGVEIR 256 + + A + ++R Sbjct: 239 FLHDADARIFG---DVR 252 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 36/120 (30%), Gaps = 12/120 (10%) Query: 15 GQVVKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------RVVDKS 64 +K + + + + G + + A G + Sbjct: 132 PVSIKCRIGVDDLDSWEFFTDFIQTVRDAGCKIFIVHARKAWLKGLSPKENREVPPLHYE 191 Query: 65 WVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 +V R+ + + + GGIK+L+ + L D + + A +P + R Sbjct: 192 FVHRLKAEMPELNLSINGGIKTLDQIEEQLKD-LDGVMVGREAYENPWFLHDADARIFGD 250 >UniRef50_Q9V1G3 Indole-3-glycerol phosphate synthase n=11 Tax=Euryarchaeota RepID=TRPC_PYRAB Length = 229 Score = 73.6 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 70/224 (31%), Gaps = 36/224 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + + +RY GA + + G + + R+ + ++P I + E+ Sbjct: 37 DPLEILRRYERAGAVGISYITDPKYFRG---NFDFFKRLCKETELPVLRKDFITTKEEIE 93 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 K G + + + L D + + Sbjct: 94 KTAEAGGSAVLLITRLLKDKLPEF----------------------------VDHAREHG 125 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCHVPL--IAS 207 + + TL+ ++ + + I +N + + ++ K+ + ++ Sbjct: 126 LDTLVEVHTLEELKIAIQTNSTMIGINNRDIGKLELDDGNVSLTAKLAPLIPDKFVKVSE 185 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 G T+E A + D AL + K LK+++ + Sbjct: 186 SGITTLEDLKVALKY--ADAALIGTALMKTEDPEKLLKSFVEAK 227 >UniRef50_Q3B2C7 Indole-3-glycerol phosphate synthase n=11 Tax=Chlorobiaceae RepID=TRPC_PELLD Length = 262 Score = 73.6 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 49/212 (23%), Gaps = 35/212 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A Y E GA L G ++ V+ + +P I Sbjct: 72 DPVRIALHYEEIGASALSVLTDRQFFQGSP---DYLRAVSAAVRLPVLRKDFIVDESQIF 128 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD I + AL L Q + Sbjct: 129 ESRLMGADAILLIVAALEPRQLR---------------------------DYLQTASETG 161 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA--SG 208 + + + + GA I +N N +R IA Sbjct: 162 LDVLVEVHDRRELDTAAEEGATMIGVNNRNLKDFSVDPATSS--DLRPFFPPDTIAVSES 219 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 G T RDA L Sbjct: 220 GLKTAGDI-AHLRDAGFHAVLIGEGLQTSKEL 250 >UniRef50_B3E8L6 Dihydrouridine synthase, DuS n=1 Tax=Geobacter lovleyi SZ RepID=B3E8L6_GEOLS Length = 219 Score = 73.6 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 1/82 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + G +VL+ G D +V + +P+IA+G T+E L Sbjct: 62 FESGGVDFLVLHPRTVLQEYKGLADHGITTRVVQETGLPVIANGDVRTVEDGLRVLEQTK 121 Query: 225 VDGALAASVFHKQIINIGELKA 246 G + + L+A Sbjct: 122 AAGLMLGRGAIADPLLFQRLRA 143 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 5/147 (3%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPL---AKRYAEEGADELVFYDITASSDGRV-VDKS 64 + + +V D + + G D LV + T + + D Sbjct: 29 TILLAVQAIVSARLINILIGYSDPQQIFSLLPLFESGGVDFLVLHPRTVLQEYKGLADHG 88 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 +RV + +P G ++++ED ++L A + + A+ADP L RL Q Sbjct: 89 ITTRVVQETGLPVIANGDVRTVEDGLRVLEQTKAAGLMLGRGAIADPLLFQRLRAGRPDQ 148 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDES 150 Sbjct: 149 PERAARAAMLRHYLAGLLERYQGIFCG 175 >UniRef50_C1EGQ3 Predicted protein n=2 Tax=Micromonas RepID=C1EGQ3_9CHLO Length = 353 Score = 73.6 bits (179), Expect = 6e-12, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 1/100 (1%) Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCHVP 203 + + R T +T++ + ++K G ++ R+ +++K+V E P Sbjct: 155 HVTCKIRLLETIEQTVELARVIEKCGVSAFGVHGRYVGQRPRDAAHWDKIKQVVESVSCP 214 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +IA+G F + + A+ + Sbjct: 215 VIANGDVFEYSDFEKIRAETGAAAAMCGRGAMWNQSIFRK 254 Score = 67.1 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 39/188 (20%), Gaps = 12/188 (6%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVID 74 K E I V LA+ + G + R + +V E + Sbjct: 156 VTCKIRL---LETIEQTVELARVIEKCGVSAFGVHGRYVGQRPRDAAHWDKIKQVVESVS 212 Query: 75 IPFCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRL-----ADRFGVQCIVVG 128 P G + D K GA A+ + ++ + D Sbjct: 213 CPVIANGDVFEYSDFEKIRAETGAAAAMCGRGAMWNQSIFRKEGVIPPRDNLNSLLTKCF 272 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI--VLNMMNQDGVRN 186 T W G I + + Sbjct: 273 EWNHSLKNTKYLTREILIKSTGLENEEGWALNKSKSLADVAGVFNIPENVIGRKRVSNLK 332 Query: 187 GYDLEQLK 194 + ++ Sbjct: 333 RPCEDLVE 340 >UniRef50_A4J147 Indole-3-glycerol phosphate synthase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=TRPC_DESRM Length = 265 Score = 73.6 bits (179), Expect = 7e-12, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 60/222 (27%), Gaps = 36/222 (16%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA Y GA L G+ +++ + + +P I + Sbjct: 73 QLAHIYQSNGAAALSVLTDENFFLGK---LTYLEEIKQQSSLPLLRKDFILDPVQLYQSR 129 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GAD + + + L + + Sbjct: 130 LAGADAVLLIAGLLT---------------------------PGELSQLFLLCREIGMQA 162 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC---HVPLIASGGA 210 + + T + +Q V A I +N + + +L K+ E + +++ G Sbjct: 163 LVEVHTQEELQRVLTTDAKLIGINNRDLSTFQT--NLATTAKLLEQVQIEDITIVSESGI 220 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 E + + V G L +++ + G Sbjct: 221 AQKEDI-KFLKSLGVHGVLVGEALVTAQDIAKKVQEIVVAGG 261 >UniRef50_A8TG14 Histidine biosynthesis protein n=1 Tax=Methanococcus voltae A3 RepID=A8TG14_METVO Length = 148 Score = 73.6 bits (179), Expect = 7e-12, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 55/97 (56%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 + +AK + E GA+ L D+ + DG V+ V ++ + +P + GGI+++ED Sbjct: 4 DNPDEIAKMWVENGAEMLHLVDLDGAIDGERVNLPMVKKIIQESKVPVQMGGGIRTIEDV 63 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 ++++ G +++ I + A+ +P + +LA + G + I+ Sbjct: 64 EELVNLGINRVIIGTVAVQNPDFVEKLAKKVGSEKIM 100 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 42/104 (40%), Gaps = 1/104 (0%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 + + + + GA + L ++ +L +KK+ + VP+ GG T+ Sbjct: 1 MEYDNPDEIAKMWVENGAEMLHLVDLDGAIDGERVNLPMVKKIIQESKVPVQMGGGIRTI 60 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 E E + ++ + +V + + +L + ++ + + + Sbjct: 61 EDVEE-LVNLGINRVIIGTVAVQNPDFVEKLAKKVGSEKIMVAL 103 >UniRef50_Q1J2A4 Dihydrouridine synthase, DuS n=3 Tax=Deinococcus RepID=Q1J2A4_DEIGD Length = 333 Score = 73.2 bits (178), Expect = 7e-12, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 2/96 (2%) Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASG 208 R +++ Q + GA I ++ +G D + + +V VP++ SG Sbjct: 146 IRLGWDTDRSVEIAQGLAAAGAALITVHGRTSVQRYSGEADWDAIARVAASVKVPVVGSG 205 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + E + V + L Sbjct: 206 DVKSAEQARARL-NTGVAAVMIGRGAVGNPWLFRAL 240 Score = 61.3 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 8/111 (7%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRV 60 A R LDV K V +A+ A GA + + T+ Sbjct: 132 RAMRSATTLDVSA----KIRLGW---DTDRSVEIAQGLAAAGAALITVHGRTSVQRYSGE 184 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 D ++RVA + +P +G +KS E A L+ G + I A+ +P Sbjct: 185 ADWDAIARVAASVKVPVVGSGDVKSAEQARARLNTGVAAVMIGRGAVGNPW 235 >UniRef50_C9ZWQ2 tRNA-dihydrouridine synthase 1, putative n=2 Tax=Trypanosoma brucei RepID=C9ZWQ2_TRYBG Length = 520 Score = 73.2 bits (178), Expect = 7e-12, Method: Composition-based stats. Identities = 18/181 (9%), Positives = 46/181 (25%), Gaps = 10/181 (5%) Query: 68 RVAEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 + + G +++ AA+ + + + N Sbjct: 149 ALDNDHPLFAQFCGNDPETILAAARHVEDYCEAVDFNIGCPQGIARRGHYGSFLMED--- 205 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + + R + TL + + ++ G + ++ ++ Sbjct: 206 -WELLHNILHALAVELRVPVTAKMRIFDDEALTLKYAEMLRDTGIYVLCVHGRTRENKGQ 264 Query: 187 GYDLEQLKKVRE-----VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 L+ +R +P+IA+G T E +G + A Sbjct: 265 QQQPADLRMIRRVHEHLRGSIPIIANGNVLTFEDVPRNLAITGCEGYMCAEPLLWDPKLF 324 Query: 242 G 242 Sbjct: 325 A 325 Score = 70.9 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 9/108 (8%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSW 65 +++R K F + + + A+ + G L + T + G + D Sbjct: 217 AVELRVPVTAKMRIFDDEAL---TLKYAEMLRDTGIYVLCVHGRTRENKGQQQQPADLRM 273 Query: 66 VSRVAEVI--DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADP 110 + RV E + IP G + + ED + L+ G + P L DP Sbjct: 274 IRRVHEHLRGSIPIIANGNVLTFEDVPRNLAITGCEGYMCAEPLLWDP 321 >UniRef50_A9KG09 NIFR3-like protein n=6 Tax=Coxiella burnetii RepID=A9KG09_COXBN Length = 353 Score = 73.2 bits (178), Expect = 8e-12, Method: Composition-based stats. Identities = 26/193 (13%), Positives = 60/193 (31%), Gaps = 14/193 (7%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAG-GIKSLE-DAAKILSFGADKISINSPALADPTLITRL 116 + + E + V G +SL A G D+I++N + R Sbjct: 69 KGKQWRCLDYSPEEHPLALQVGGSDPQSLALCARLAEEKGFDEINLNVGCPSGRVTAGRF 128 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + +V + V+ T + + +V+ V + G ++ Sbjct: 129 GACLLKEAELVADCVAAMSAEVNIPVSVKTRTGVDDQDSYEHLYHFVKTVAEAGCRIFII 188 Query: 177 NMMNQDGVRNGYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + + +++ + + +I +GG T+E + R+ VD Sbjct: 189 HARKAWLKGLSPAENRTVPPLAYPMVYQLKQDFPGLEIIINGGIKTIEAINDHLRE--VD 246 Query: 227 GALAASVFHKQII 239 G + + + Sbjct: 247 GVMIGREAYANPL 259 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 12/110 (10%) Query: 15 GQVVKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------RVVDKS 64 VK + + + + K AE G + + A G + Sbjct: 153 PVSVKTRTGVDDQDSYEHLYHFVKTVAEAGCRIFIIHARKAWLKGLSPAENRTVPPLAYP 212 Query: 65 WVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 V ++ + + + GGIK++E L D + I A A+P Sbjct: 213 MVYQLKQDFPGLEIIINGGIKTIEAINDHLRE-VDGVMIGREAYANPLFC 261 >UniRef50_A6GHV6 Dihydrouridine synthase family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHV6_9DELT Length = 321 Score = 73.2 bits (178), Expect = 8e-12, Method: Composition-based stats. Identities = 18/179 (10%), Positives = 48/179 (26%), Gaps = 4/179 (2%) Query: 70 AEVIDIPFCVAGGI--KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 + + + GG A ++ GA I +N A + V Sbjct: 57 RAGVPVFVQLLGGEPHWMARAAETAVALGAPGIDLNFGCPAKTVNSSDGGATLLKDPCRV 116 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG 187 T + ++ + + GA + ++ + + Sbjct: 117 EAVTRAVRAAVPAELPVTVKIRVGWE-DPSPVVEIARAAEAGGASWLTIHGRTRRQLYKP 175 Query: 188 Y-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 D E + + + + ++A+G + EA + + + + + Sbjct: 176 PVDYEAIGRAQAAVSMAVVANGDLFGVPSLFEAAQRSGCTAFMIGRGAMGRPELFARAR 234 Score = 67.8 bits (164), Expect = 4e-10, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 28/104 (26%), Gaps = 4/104 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVI 73 VK E +V +A+ GA L + T VD + R + Sbjct: 132 PVTVKIRVGW--EDPSPVVEIARAAEAGGASWLTIHGRTRRQLYKPPVDYEAIGRAQAAV 189 Query: 74 DIPFCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRL 116 + G + G I A+ P L R Sbjct: 190 SMAVVANGDLFGVPSLFEAAQRSGCTAFMIGRGAMGRPELFARA 233 >UniRef50_C8W1S8 Indole-3-glycerol-phosphate synthase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1S8_DESAS Length = 235 Score = 72.8 bits (177), Expect = 9e-12, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 67/233 (28%), Gaps = 41/233 (17%) Query: 7 IPCL-DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW 65 IP + D++ + + D V +AK AE GA L + + G Sbjct: 18 IPVIPDIK---CISPKEGDLLR-GRDPVEVAKLLAEAGAPALSVVTESKNFGGS---LEL 70 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 + R+A + +P I ++D GA+ I + Sbjct: 71 LERIAALTKLPTLRKDFITCVDDLKITKDCGAEAILLICA-------------------- 110 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ---- 181 + + + + + T + + K GA + +N N Sbjct: 111 -------AQPFSLLIKLYEEALKIGLEPLVESHTKEELILAGKIGAKLVGINNRNILELE 163 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 E L K + + LI+ T A R A D L + Sbjct: 164 RDDGTVSATELLAKYKPKDAI-LISESSIQTPVEAQAAIR-AGADAVLIGTAI 214 >UniRef50_A8PLS2 tRNA-dihydrouridine synthase A n=1 Tax=Rickettsiella grylli RepID=A8PLS2_9COXI Length = 330 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 64/206 (31%), Gaps = 14/206 (6%) Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGI-KSLEDAAKILS-FGADKISINSPALADPTL 112 + + ++ A + + GGI L AAKI+ +G +I++N ++ Sbjct: 47 AILKSPARERLLTVDANEKALAIQLGGGIASDLSKAAKIVESYGYSEINLNVGCPSEKVQ 106 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + V + V T + ++++V G Sbjct: 107 SGGFGVVLLKEPNRVADAIAAMKAVVRLPVTVKTRIGVDNDESYDYLASFIRQVSLAGCD 166 Query: 173 EIVLNMMNQDGVRNGY---------DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRD 222 +++ + + +++ + H+ ++ +GG ++ + + Sbjct: 167 TFIIHARKAWLHGVSPKENREIPPLNYPWVYQIKRDFPHLTIVLNGGITCLKRAYQQLQH 226 Query: 223 ADVDGALAASVFHKQIINIGELKAYL 248 VD + +L A + Sbjct: 227 --VDAVMIGRAAWYNPYLFAQLDALI 250 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 12/132 (9%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVP-LAKRYAEEGADELVFYDITASSDG---------RVV 61 VR VK +++ D + ++ + G D + + A G + Sbjct: 132 VRLPVTVKTRIGVDNDESYDYLASFIRQVSLAGCDTFIIHARKAWLHGVSPKENREIPPL 191 Query: 62 DKSWVSRVAEVIDIPFCV-AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + WV ++ V GGI L+ A + L D + I A +P L +L Sbjct: 192 NYPWVYQIKRDFPHLTIVLNGGITCLKRAYQQLQH-VDAVMIGRAAWYNPYLFAQLDALI 250 Query: 121 GVQCIVVGIDTW 132 Q + + Sbjct: 251 SPQDRFIVPHRF 262 >UniRef50_C6XDW4 Histidine biosynthesis protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XDW4_METSD Length = 232 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 30/255 (11%), Positives = 63/255 (24%), Gaps = 36/255 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKR-YAEEGADELVFYDIT 53 IIP +D+ + VV + + + + D L D+ Sbjct: 1 MNIIPVIDLLEHHVVHAKRGERQHYRPIESGLCDSSQPLAITRALLELYPFDTLYIADLN 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A G+ ++ + + L G P Sbjct: 61 AIQ-GKPAHVDEIALIRQHYP-------------QLRIWLDAGFKNTRDLLPWSGLEVTP 106 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 ++ + + A + Sbjct: 107 VIGSESLPDIGAYQELISEGVAHVLSLDFRGDRYQGPEALLDNPRLWPQ----------L 156 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ + G G D +L+++ + L +GG + R+ + GAL AS Sbjct: 157 VIGMTLANVGSNQGPDHARLQQLVGMAQHGKLYGAGGVRDINDLQR-LREQGIAGALVAS 215 Query: 233 VFHKQIINIGELKAY 247 H I+ ++ Sbjct: 216 ALHSGQISSQDIAHI 230 >UniRef50_B1GZV7 Putative tRNA-dihydrouridine synthase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZV7_UNCTG Length = 320 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 25/221 (11%), Positives = 61/221 (27%), Gaps = 7/221 (3%) Query: 37 KRYAEEGADELVFYDITA--SSDGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAKI 92 + GA + ++A + + + + + G E A + Sbjct: 30 RLAKSGGAGLVYTGMLSARALVRSDEKTEKLLKTTEDERPVAAQIFGSAAHIMAEAAKIV 89 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + GAD I +N + + ++ V + Sbjct: 90 RNSGADIIDVNLGCPVKKVAKAGAGAKLLAD--EKLVSEILESVVKSVDVPVTVKIRTGL 147 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAG 211 + ++ G + ++ +G DL+ +P+IA+GG Sbjct: 148 LPEHNAATEIIKVAYNCGIKMVAVHARPASQGHSGFPDLKLFAASCAGAKIPVIANGGVV 207 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + + R + G + L+A+ ++ Sbjct: 208 DEKTAADFLRVPNCAGIMIGRGALGNYSIFKRLEAFFSSGK 248 >UniRef50_Q2LUD7 Indole-3-glycerol phosphate synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUD7_SYNAS Length = 276 Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 57/222 (25%), Gaps = 33/222 (14%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D +A+ Y GA + G + + R + +P I Sbjct: 83 DPAVVAEIYERNGAAAISVLTDRPFFGGEKFYLNVIRR---TVGLPVLRKDFIIDSWQVY 139 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD I + L D L L G Sbjct: 140 ESRMLGADAILLIVGMLEDRQLREYLDLA---------------------------GTLG 172 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC-HVPLIASGG 209 + + + ++ + AG I +N N + L+ V + ++ G Sbjct: 173 LAALVEVHDHEELERAVRANAGIIGINNRNLKNFITDLNT-TLELVSSIPGDRFVVTESG 231 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + E A + L +L+ L + Sbjct: 232 IRSREDVQRMM-SAGITAFLIGETLMTAPDIGLKLRQLLGKE 272 >UniRef50_Q0A6E8 Indole-3-glycerol phosphate synthase n=5 Tax=Proteobacteria RepID=Q0A6E8_ALHEH Length = 267 Score = 72.4 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 54/224 (24%), Gaps = 35/224 (15%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D +A+ Y GA L G D + +P I Sbjct: 74 RDPYDPATIARGYEAAGAACLSVLTDCDFFQG---DDEHLRVARAACGLPVLRKDFIIDP 130 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + GAD + + + AL D ++ Sbjct: 131 WQVLEARMLGADCVLLIAAALDD---------------------------GRMAELHDLA 163 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREVCHVPL 204 G + + D + + + +N + L+ L +V L Sbjct: 164 GSLGMDVLVEVHDADELARAARLKPRLLGINNRDLRTFETRLETTLDLLHQVPA--GSLL 221 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + G T R A VD L F + L+ Sbjct: 222 VTESGIHTPADVARM-RAAGVDAFLVGEAFMRSPQPGDALQELF 264 >UniRef50_C9M7Q0 Dihydrouridine synthase family protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7Q0_9BACT Length = 317 Score = 72.4 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 62/224 (27%), Gaps = 14/224 (6%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED----AA 90 + GA T G + + + + + G E A Sbjct: 11 RLAVRLGAGLTHTEMASATGLVRGGRQTLRVLDQTNDTRPLVAQLFAG--DAESLVRGAE 68 Query: 91 KILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 L+ G D + IN L + G + + Sbjct: 69 VALTCGPFDALGINMACPMPKVLKRGAGSALLDRPDEAASMVRELCRFGFPVWPKVRKEP 128 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASG 208 + + +T E + + E GA + ++ G D + +K++ ++ASG Sbjct: 129 AGSGITTEEFVQILFEA---GASCVAVHGRTPGQRYEGQADRKSVKELCRAFPGRILASG 185 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 T E L+ A L A F + L+ + Sbjct: 186 DVFTAEDVLDYL-SAGAGAVLLARGFIADPFIVPRSLDLLSGRP 228 Score = 61.3 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 42/147 (28%), Gaps = 1/147 (0%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + E GA + + T D+ V + +G + + ED Sbjct: 135 TEEFVQILFEAGASCVAVHGRTPGQRYEGQADRKSVKELCRAFPGRILASGDVFTAEDVL 194 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 LS GA + + +ADP ++ R D + ++ Sbjct: 195 DYLSAGAGAVLLARGFIADPFIVPRSLDLLSGRPEARPSLASRYEIFCEFAGELERLHGP 254 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + + + GAG + Sbjct: 255 KMALGMVKRFAPGFFKFQAGAGALRRT 281 >UniRef50_Q22A31 TIM-barrel protein, yjbN family n=2 Tax=cellular organisms RepID=Q22A31_TETTH Length = 466 Score = 72.4 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 26/263 (9%), Positives = 72/263 (27%), Gaps = 33/263 (12%) Query: 8 PCLDVRDGQVVKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASSDGRVVDKSW 65 P +D+ D V F I+ + + ++I + Sbjct: 94 PMIDITD---VHFRNFIRLLTRYSILYTEMIHE------QAVH-HNIRGPQ-------EF 136 Query: 66 VSRVAEVIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + + G + A G D++++N +D + + Sbjct: 137 LRFDPVQHPVVIQLGGNDPDNLAKAAKICEEIGYDEVNLNVGCPSDRVQSGKFGACLMKE 196 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG-AGEIVLNMMNQD 182 +V E V + D+++ V ++G V++ Sbjct: 197 PELVAEIMRKMKEACSIPVTVKCRLGVDNFDSYEFARDFIKTVSEKGQVQHFVVHARKAF 256 Query: 183 GVRNGYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFR-DADVDGALAA 231 + + +++ E H+ +GG T + + + + + G + Sbjct: 257 LKGLNPAQNRNVPPLKYDYVLRLKQEFPHLHFSINGGFKTYDQISDILKQENGLHGCMLG 316 Query: 232 SVFHKQIINIGELKAYLATQGVE 254 ++ ++ + Sbjct: 317 RAAYETPWLFSDMDRRYFGKQNP 339 >UniRef50_A5EVG3 Indole-3-glycerol phosphate synthase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=TRPC_DICNV Length = 267 Score = 72.4 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 35/220 (15%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 LA+ + GA L + T G D +++S V + + +P I S + Sbjct: 80 LAQECVQYGASCLSVFTDTHFFYG---DVAYLSAVKKAVPVPVLRKDFIISRYQILESRL 136 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 G D I + L D L + + + Sbjct: 137 LGVDCILLIVAILTDEQLQEFVVLAHDL---------------------------GMDVL 169 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASGGAGT 212 + + ++ + +N N + LE+ ++R+ +I+ G T Sbjct: 170 IEIHDENDLKRALNVPVRTLAINNRNPEDFN--ASLEKSAQLRQQLPKDYFVISESGINT 227 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + + +D L L + + Sbjct: 228 HADVVYLL-NCGLDAVLIGGALMSAEFAGEALHHLIYGKE 266 >UniRef50_Q8EAJ0 tRNA-dihydrouridine synthase A n=121 Tax=Bacteria RepID=DUSA_SHEON Length = 335 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 67/207 (32%), Gaps = 17/207 (8%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPALADPT 111 A GR +++ E + + G ++ A G D++++N +D Sbjct: 51 AILHGRG---DYLTYNQEEHPLALQLGGSNPVELARCAKLAAERGYDEVNLNVGCPSDRV 107 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 R + +V + V T + + ++ V +G Sbjct: 108 QNGRFGACLMAEPELVAECVDAMKQVVDIPVTVKTRIGIDEQDSYEFLTHFIDTVMAKGC 167 Query: 172 GEIVLNMMNQDGVRNGY---------DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFR 221 GE +++ D +++ +++ + + + +GG ++E + Sbjct: 168 GEFIIHARKAWLQGLSPKENREIPPLDYDRVYQLKRDYPALNISINGGITSLEQAQTHLQ 227 Query: 222 DADVDGALAASVFHKQIINIGELKAYL 248 DG + ++ + ++ L Sbjct: 228 HL--DGVMVGREAYQNPYMLAQVDQVL 252 Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 62/209 (29%), Gaps = 18/209 (8%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG--------- 58 +D+ VK + + + + +G E + + A G Sbjct: 133 VVDI--PVTVKTRIGIDEQDSYEFLTHFIDTVMAKGCGEFIIHARKAWLQGLSPKENREI 190 Query: 59 RVVDKSWVSRVAEVIDIPFC-VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 +D V ++ + GGI SLE A L D + + A +P ++ ++ Sbjct: 191 PPLDYDRVYQLKRDYPALNISINGGITSLEQAQTHLQH-LDGVMVGREAYQNPYMLAQVD 249 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 +A + R+ GA Sbjct: 250 QVLCGS---TKAVMSREAVIEAMLPYIEAHLQVGGRLNHITRHMIGLFQGLPGARA-WRR 305 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 ++++ +NG +E +K + L+A Sbjct: 306 YLSENAHKNGAGIEVVKLAYQSVQTDLVA 334 >UniRef50_Q2NEW9 Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NEW9_METST Length = 239 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 83/250 (33%), Gaps = 29/250 (11%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEII-------GDIVPLAKRYAEEGADELVFYDIT 53 M+ IIP +D+ + V G R + + +A E+GA + D+ Sbjct: 1 MIFM-IIPVIDIMHNECVSGKSGRRSTYKKLRSIYGDNPLDIATALKEDGAQLIYIADLD 59 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + + IP + GI S+ED + + + I Sbjct: 60 KIERIDDNNN---IISSINNIIPVMLDNGISSIEDIENN-KNICSYNILATETMTSLDNI 115 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + ++ +VV ID +E + D + + K Sbjct: 116 EEIFKKYDSNKLVVSIDIKN--------------NELLVNNKDIDLEDVIYLINKYKPKY 161 Query: 174 IVLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 ++ ++ G + G + ++++ +++ H +GG + +++ L + Sbjct: 162 TIILNISYVGTKKGVNTNIIEEITKKIPHTKCCIAGGIRN-SDIETYTKK-NINNFLIGT 219 Query: 233 VFHKQIINIG 242 + H+ ++ Sbjct: 220 LLHEGNLSYK 229 >UniRef50_B5YGU5 Indole-3-glycerol phosphate synthase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGU5_THEYD Length = 263 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 59/227 (25%), Gaps = 34/227 (14%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + E DI +A Y GAD + G + IP Sbjct: 67 KGILKEY--DIEEMANIYVSSGADAISVITEEDFFLGNPQFLVTIK--KNHPHIPVLRKD 122 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I + +D I + + L Sbjct: 123 FIFDEYQVYESKLLHSDAILLIASILTKE---------------------------QCKT 155 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVC 200 + + T + + + + + GA I +N N ++ + LKK+ Sbjct: 156 LYELTKSLGMDVLFEIHDEEDLDKSLFAGADIIGINNRNLKTLQIDINTTFKLKKLIPEG 215 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 V +++ G H E + VD L + ++K Sbjct: 216 KV-IVSESGISGKSHVQELIKQ-GVDAILVGTSIVLSDNPAEKIKEL 260 >UniRef50_C2KPT6 Indole-3-glycerol-phosphate synthase n=3 Tax=Mobiluncus RepID=C2KPT6_9ACTO Length = 287 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 58/214 (27%), Gaps = 35/214 (16%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 + I D LA+ Y GA + T + G V +++P + Sbjct: 66 FLDPIEDPAALAREYVAGGAVAVSVVTETPNYLG---TLDDFKAVRRAVEVPLLRKEYVV 122 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + + GAD + + L L + + Sbjct: 123 TPYQIHESRVLGADMVLLMVALLEPLVLGLLVERTQSL---------------------- 160 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV--CHV 202 + + + ++ GA I LN N++ D +++ +V V Sbjct: 161 -----GMEPLVECHSRLEARQAIAAGARIIGLNARNRET--GEVDRNNCEQIIDVIPPDV 213 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 ++A G R D L + Sbjct: 214 TVVAESGVRGPRDVFNYARV-GADAVLVGESLVR 246 >UniRef50_A2QA98 Similarity to hypothetical protein SPBC36B7.04 - Schizosaccharomyces pombe n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QA98_ASPNC Length = 466 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 20/174 (11%), Positives = 52/174 (29%), Gaps = 9/174 (5%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 A +AA+ ++ D + +N + Sbjct: 108 FVQFCANDPDDFLEAARHVAPYCDAVDLNLGCPQGIAKRGHYGAFLQED----WDLIYRL 163 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLE 191 ++ + R + T+ +TL++ + + GA I ++ ++ + D Sbjct: 164 INRLHNELSIPVTAKFRIQETKEKTLEYAKMILSAGANIITVHGRRREQKGHNTGLADWS 223 Query: 192 QLKKVREV--CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 ++ +R+ + A+G E + DG ++A + Sbjct: 224 YIRYLRDNLPPETVIFANGNNLNYEDLDRCLEETGADGVMSAEGNLSDPSIFSK 277 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 6/100 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IP 76 +FR E + AK GA+ + + G D S++ + + + Sbjct: 178 KFRIQETKEKTLEYAKMILSAGANIITVHGRRREQKGHNTGLADWSYIRYLRDNLPPETV 237 Query: 77 FCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITR 115 G + ED + L GAD + L+DP++ ++ Sbjct: 238 IFANGNNLNYEDLDRCLEETGADGVMSAEGNLSDPSIFSK 277 >UniRef50_C8QWB5 Dihydrouridine synthase DuS n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QWB5_9DELT Length = 335 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 18/153 (11%), Positives = 41/153 (26%), Gaps = 3/153 (1%) Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 GA I +N A R + +V + + + Sbjct: 98 LGAAAIDLNLGCPAPDIRRQGGGSRLMEEPQMVRR--LVQETRRRTALPLSAKIRLGEEL 155 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTM 213 + ++ G + ++ + E + KV+ +P++A+GG + Sbjct: 156 NAERLRAFCLLLEDAGVDLLTVHARLRGEPYGRKPRWEWVGKVKHWLRIPVVANGGIFSA 215 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + DG + +L Sbjct: 216 ADAAACLAASGADGLMIGRAAAATPWLFRQLAE 248 Score = 57.0 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 20/68 (29%), Gaps = 2/68 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVIDIPF 77 K + + G D L + GR WV +V + IP Sbjct: 148 KIRLGE-ELNAERLRAFCLLLEDAGVDLLTVHARLRGEPYGRKPRWEWVGKVKHWLRIPV 206 Query: 78 CVAGGIKS 85 GGI S Sbjct: 207 VANGGIFS 214 >UniRef50_B0EC90 tRNA-dihydrouridine synthase, putative n=2 Tax=Entamoeba RepID=B0EC90_ENTDI Length = 340 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 54/180 (30%), Gaps = 8/180 (4%) Query: 71 EVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + I V G + AK L D I IN + Sbjct: 77 KERPIIIQVVGSDANEMARTAKFLQSYCDAIDINLGCPQKIAQKGNYGAYLALD----FD 132 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN---QDGVRN 186 T VN + R + +T+ +V+ +Q+ G I ++ + + Sbjct: 133 HTKEIVNAVIEAVNIPVYCKVRVFEDEDKTMKFVEMLQECGIWGIAVHGRTINEKQSMNY 192 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + K++E +P+IA+G + E E + DG + + Sbjct: 193 HARWNYIAKIKEQLKIPVIANGEMRSREKIEECKKVTHSDGYMIGFGLLMNPGMCEGIID 252 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 9/118 (7%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT---ASSDGRVVD 62 +I +++ K F + + + E G + + T S Sbjct: 141 VIEAVNI--PVYCKVRVFEDE---DKTMKFVEMLQECGIWGIAVHGRTINEKQSMNYHAR 195 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADR 119 ++++++ E + IP G ++S E + +D I L +P + + D Sbjct: 196 WNYIAKIKEQLKIPVIANGEMRSREKIEECKKVTHSDGYMIGFGLLMNPGMCEGIIDN 253 >UniRef50_D0MWM4 tRNA-dihydrouridine synthase 3 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MWM4_PHYIN Length = 681 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 26/259 (10%), Positives = 62/259 (23%), Gaps = 49/259 (18%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-LEDAAKIL 93 + + GAD T + + + + R +AG + ++L Sbjct: 306 RLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQLAGSFSDQMTRVCELL 365 Query: 94 --SFGADKISINSPALADPTLITRLADRFGVQCIVVGID-----------TWYDAETGKY 140 D + IN D + + T Sbjct: 366 TRETDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGGIVN 425 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQ----------------------KRGAGEIVLNM 178 + Q + ++Q + I ++ Sbjct: 426 TPGLTVKLRTGWSEKQPTAHKLIPKLQAVRASQAYVNSAVVTADFKLRATQSIDAITVHG 485 Query: 179 MNQDGVRN-GYDLEQLKKVREV----------CHVPLIASGGAGTMEHFLEAFRDADVDG 227 ++ D + + + + ++P + G + E F E ++ +D Sbjct: 486 RSRLQRYTKHADWDYIFQCSDAQKGSIDDKPLSNIPFVGGGDVLSYEEFDEHLQNGKLDT 545 Query: 228 ALAASVFHKQIINIGELKA 246 + A + E+K Sbjct: 546 CMLARGALIKPWLPTEIKE 564 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 58/225 (25%), Gaps = 39/225 (17%) Query: 15 GQVVKGVQFRNHEIIG--------DIVPLAKRYAEEGA-------------DELVFYDIT 53 G VK + + V ++ Y D + + + Sbjct: 428 GLTVKLRTGWSEKQPTAHKLIPKLQAVRASQAYVNSAVVTADFKLRATQSIDAITVHGRS 487 Query: 54 ASS-DGRVVDKSWVSRVAEV----------IDIPFCVAGGIKSLEDAAKILSFG-ADKIS 101 + D ++ + ++ +IPF G + S E+ + L G D Sbjct: 488 RLQRYTKHADWDYIFQCSDAQKGSIDDKPLSNIPFVGGGDVLSYEEFDEHLQNGKLDTCM 547 Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 + AL P L T + +R + + + R ++ Sbjct: 548 LARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEW 607 Query: 162 WVQEVQKRGAGEI-----VLNMMNQDGVRNGYDLEQLKKVREVCH 201 + G + +N DLE L + Sbjct: 608 QSFLCRYIPVGVLETLPQRINDR-PSPYYGRSDLETLMASDQAVD 651 >UniRef50_A7HK00 Dihydrouridine synthase DuS n=8 Tax=Thermotogaceae RepID=A7HK00_FERNB Length = 322 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 3/96 (3%) Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 R + E + + + ++ + +G + K+ VPL SG Sbjct: 138 RIGWEKDEFEKIYNILLEENVDAVFVHGRTAKQMYSG---KATWKIYNPGFVPLYISGDI 194 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 T E A + G + A E+ Sbjct: 195 YTKEDIKNAMEQSGATGVIVARGSIGNPWIFSEIGE 230 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 39/132 (29%), Gaps = 7/132 (5%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE 71 V VK + I + E D + + TA ++ Sbjct: 129 VLKRFTVKTRIGWEKDEFEKIYNI--LLEEN-VDAVFVHGRTAKQMYSG---KATWKIYN 182 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 +P ++G I + ED + GA + + ++ +P + + + + Q + + Sbjct: 183 PGFVPLYISGDIYTKEDIKNAMEQSGATGVIVARGSIGNPWIFSEIGEPNCEQRLCTILK 242 Query: 131 TWYDAETGKYHV 142 Sbjct: 243 HLEYLYDEYKDY 254 >UniRef50_B8I0V0 Indole-3-glycerol phosphate synthase n=3 Tax=Firmicutes RepID=TRPC_CLOCE Length = 260 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 57/217 (26%), Gaps = 35/217 (16%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + +AK Y GA + G ++ V + + IP + Sbjct: 73 IDIAKDYEAAGAGAISVLTEPEFFLGSD---QYLKDVKKTVSIPVLRKDFTIDPYQIYEA 129 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 GAD + + L TL + G+ + Sbjct: 130 ALIGADCVLLICALLDTDTLKEYIKIADGLGLSCLV------------------------ 165 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASGGA 210 + + V+ + G+ + +N N ++RE+ + ++ G Sbjct: 166 ---EAHDENEVKSAIEAGSRIVGVNNRNLKTFEVDITNSI--RLRELVPSDISFVSESGI 220 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 T + A R L + EL Sbjct: 221 RTAQDIS-ALRRIGASAVLIGETLMRSGDTGAELAKL 256 >UniRef50_D1JF95 Putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=uncultured archaeon RepID=D1JF95_9ARCH Length = 238 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 85/248 (34%), Gaps = 29/248 (11%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEII-----------GDIVPLAKRYAEEGADELVFY 50 + R+I +D+ DG VV + + + D A+ E+ Sbjct: 1 MDFRLIFVMDLLDGVVVHAKRGEREKYVPIHRFSSIVTSSDP---ARVIETIKPKEVYIA 57 Query: 51 DITASSDGRVVDKSWVSRVA-EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 D+ ++ + + D+ + G+K +ED + + + Sbjct: 58 DLNRLL-STGNNRPILKDLRTRNRDLRIMLDYGVKGMEDLKEAVDAEMADKFVLGTETIS 116 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 L+ + + I + ID + + + + L ++E+ K Sbjct: 117 IELLEEASKSDIITDISISIDLFNNEVLTSDTRM------------KIDPLRLIKELNKF 164 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 ++++ +N+ G ++G D E L + E+ ++ GG E + V GAL Sbjct: 165 PVRDVIVLELNRVGTKSGIDFEFLARAVELSEHDILCGGGVRNCEDVHKMAEI-GVKGAL 223 Query: 230 AASVFHKQ 237 A+ H Sbjct: 224 VATAIHDG 231 >UniRef50_O74553 tRNA-dihydrouridine synthase 4 n=1 Tax=Schizosaccharomyces pombe RepID=DUS4_SCHPO Length = 326 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 62/169 (36%), Gaps = 6/169 (3%) Query: 78 CVAGGIKSL---EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + G+ E AA+++ D I IN + + + + Sbjct: 77 ILQFGVDDPVILEKAAQLVGPYVDGIGINCGCPQTWAIQEGIGSALLDEPE--KVHKLVR 134 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQL 193 A + T + R +T +Q ++K GA I ++ + + +L+ + Sbjct: 135 AVKSTLGESFCTEVKIRIAKDLNKTRHLMQVIEKSGADIITVHGRTRQDRSSFPVNLDAI 194 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 ++VR +P++A+G ++ LE + + G ++A + Sbjct: 195 REVRPCVQIPVVANGDVKSLRKGLEIAKYTETQGIMSARGLLENPALFA 243 Score = 64.0 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 21/179 (11%), Positives = 53/179 (29%), Gaps = 4/179 (2%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVIDIP 76 VK + + L + + GAD + + T V+ + V + IP Sbjct: 148 VKIRI---AKDLNKTRHLMQVIEKSGADIITVHGRTRQDRSSFPVNLDAIREVRPCVQIP 204 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G +KSL +I + + +++ L + + + C+ + Sbjct: 205 VVANGDVKSLRKGLEIAKYTETQGIMSARGLLENPALFAGYEETPWGCVERFLWYSTSYS 264 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 + + T+ E + ++ + + + + + L Sbjct: 265 LNFHLFYHHLTTMMGQMTTKRERMTIPKDSFASVMDWLDEHFVVRRPDEPMFGESVLPC 323 >UniRef50_Q88LF2 tRNA-dihydrouridine synthase C n=38 Tax=cellular organisms RepID=DUSC_PSEPK Length = 323 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 63/190 (33%), Gaps = 4/190 (2%) Query: 67 SRVAEVIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 +R A + + + G + E+AA GA I +N A +R + Sbjct: 57 ARTAAGVPMRVQLLGSDPVCLAENAALACELGAPVIDLNFGCPAKTVNKSRGGAVLLKEP 116 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 ++ ++ + + L+ + + G+ +V++ + Sbjct: 117 ELLHAIVREVRRAVPANIPVTSKMRLG-FDSPDGALECATALAEGGSAHLVVHARTKVEG 175 Query: 185 RNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 E + +V++V VP+ A+G T++ + + + + + + Sbjct: 176 YKPPAHWEWVARVQDVVKVPVFANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDLGLQ 235 Query: 244 LKAYLATQGV 253 + A + Sbjct: 236 IAAARDGRDY 245 Score = 60.9 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 4/144 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDIPF 77 K + + A AE G+ LV + T WV+RV +V+ +P Sbjct: 139 KMRLGFDSPDG--ALECATALAEGGSAHLVVHARTKVEGYKPPAHWEWVARVQDVVKVPV 196 Query: 78 CVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 G I +++D + GA+ I + ++ P L ++A + Sbjct: 197 FANGEIWTVDDWRRCREVSGAEDIMLGRGLVSRPDLGLQIAAARDGRDYQPMSWHDLLPL 256 Query: 137 TGKYHVNQYTGDESRTRVTQWETL 160 ++ R + + Sbjct: 257 LREFWRQAQAKLSPRYAPGRMKQW 280 >UniRef50_B2UL06 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=4 Tax=cellular organisms RepID=B2UL06_AKKM8 Length = 261 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 74/245 (30%), Gaps = 21/245 (8%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEI--------IGD--IVPLAKRYAEEGADELVFY 50 M R PC+D+ G+V + V + + D A Y +G Sbjct: 1 MTRFR--PCIDLHGGRVKQIVGGTLTQDGVSLRTNFVSDRGAAWYADLYRRDGLSGGHVI 58 Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 + + V GG + E+A + +S GA I + L D Sbjct: 59 KL------GPGNDHAAREALAAWPGGLQVGGG-MTPENAEEWISAGAS-HVIVTSCLFDA 110 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 R+ + V D + +T+ +V Sbjct: 111 EGTLRMDRLKDLVSAVGAERLVLDLSCRRVQGGWAVAMNRWQTLTELRVTAETLDVLAEH 170 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA-FRDADVDGAL 229 E +++ + +G+ +G D E ++ + +P+ +GG ++ E A Sbjct: 171 CAEFLIHAADVEGLCSGIDRELVEMLGNWRRLPMTYAGGISRIQDIDEIDALSGGTMDAT 230 Query: 230 AASVF 234 S Sbjct: 231 VGSAL 235 >UniRef50_B4U9S2 Indole-3-glycerol-phosphate synthase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U9S2_HYDS0 Length = 255 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 66/220 (30%), Gaps = 37/220 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 DI A Y E GA + +G++ V V ++IP I Sbjct: 70 DIKDQAYIYQEAGACAISVLTEEKFFNGKLSFLEDVKSV---VNIPVMRKDFIIDPLQVY 126 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + ++ AD I + + L ++ Sbjct: 127 EARAYKADAILLIARILDK---------------------------YQIEDISYEAKKLG 159 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD--LEQLKKVREVCHVPLIASG 208 + + +++V++ I LN + D + + E L +++ LIA Sbjct: 160 LEILMEIFEEHEIEKVKEF--EIIGLNNRDLDTLDIDINKSKEMLPILKDYTKAVLIAES 217 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 G + E DG L + K+ +LK + Sbjct: 218 GISSKEDIEFLK---GYDGFLVGTSIMKEDDPAKKLKELV 254 >UniRef50_C8W336 Indole-3-glycerol-phosphate synthase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W336_DESAS Length = 271 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 60/220 (27%), Gaps = 36/220 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + + K Y + GA L G ++ AE+ +P I Sbjct: 82 NPAEIIKSYTDAGASALSILTDEKFFGGSS---QYLKLGAEITHLPLLRKDFIIDEYQIY 138 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GA + + + L TL + Sbjct: 139 EAAVLGAYSVLLIARVLHPKTLKR---------------------------FYALAKELG 171 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP---LIAS 207 + + + V + G + +N N + + + ++RE VP +++ Sbjct: 172 LDALVEIHGEAELTAVLEAGVRIVGINNRNLETFQTDIN--HTLRMREKITVPEIVVVSE 229 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 G T L + A VD L F ++ Sbjct: 230 SGIKTYADILT-LKSAGVDAVLVGESFMVHPDVGAAVREL 268 >UniRef50_P53759 tRNA-dihydrouridine synthase 1 n=19 Tax=Ascomycota RepID=DUS1_YEAST Length = 423 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 26/196 (13%), Positives = 54/196 (27%), Gaps = 14/196 (7%) Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE---DAAKILSFGADKISINSPALADPT 111 S R + S + +D P V E AAK++ D + +N Sbjct: 69 SKKYREDNWSSLD--GSSVDRPLVVQFCANDPEYLLAAAKLVEDKCDAVDLNLGCPQGIA 126 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + T ++ + R ++L++ + V GA Sbjct: 127 KKGHYGSFLMEE----WDLIHNLINTLHKNLKVPVTAKIRIFDDCEKSLNYAKMVLDAGA 182 Query: 172 GEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVP--LIASGGAGTMEHFLEAFRDADVD 226 + ++ ++ + E +K +R+ A+G E D Sbjct: 183 QFLTVHGRVREQKGQKTGLANWETIKYLRDNLPKETVFFANGNILYPEDISRCMEHIGAD 242 Query: 227 GALAASVFHKQIINIG 242 ++A Sbjct: 243 AVMSAEGNLYNPGVFN 258 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 20/204 (9%), Positives = 54/204 (26%), Gaps = 14/204 (6%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSR 68 ++ K F + AK + GA L + G + + + Sbjct: 153 LKVPVTAKIRIFD---DCEKSLNYAKMVLDAGAQFLTVHGRVREQKGQKTGLANWETIKY 209 Query: 69 VAEVID--IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCI 125 + + + F G I ED ++ + GAD + L +P + + + Sbjct: 210 LRDNLPKETVFFANGNILYPEDISRCMEHIGADAVMSAEGNLYNPGVFNVGQTKNKEKIF 269 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + + ++ + ++ L + Sbjct: 270 PRVDKIIREYFQIVKECQESKASKTAMKSHFFKILRPFLPHHTDIRSTLATMNAKATWEE 329 Query: 186 NG-----YDLEQLKKVREVCHVPL 204 + ++++ E + + Sbjct: 330 WEEQVVKPVEKVVQEIFEQPDIAI 353 >UniRef50_D0NZC8 tRNA-dihydrouridine synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NZC8_PHYIN Length = 379 Score = 71.7 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 19/176 (10%), Positives = 48/176 (27%), Gaps = 12/176 (6%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 L+ G ++S ++ R + + + Sbjct: 92 CEINLNTGCPSALVSSRCFGARLMLEPERVRDICDSMRHSVALASEGNPDHPTAEVTVKC 151 Query: 149 ESRT--RVTQWETLDWVQEVQKRGAGEIVLNMM--------NQDGVRNGY-DLEQLKKVR 197 + E +V V G I+++ +D E + +++ Sbjct: 152 RIGVDDCDSYDELHHYVAAVASAGVRHIIVHARKCLLKGLSTKDNRTIPPLRYEVVYRLK 211 Query: 198 -EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + + +GG +++H E +VDG + + N + + Sbjct: 212 QDFPELSFTLNGGVKSIQHARELLNTTNVDGIMIGRAAYNTPWNFRDADRLIFNAE 267 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 36/115 (31%), Gaps = 12/115 (10%) Query: 16 QVVKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------RVVDKSW 65 VK + D + A G ++ + G + Sbjct: 147 VTVKCRIGVDDCDSYDELHHYVAAVASAGVRHIIVHARKCLLKGLSTKDNRTIPPLRYEV 206 Query: 66 VSRVAEVID-IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLAD 118 V R+ + + F + GG+KS++ A ++L+ D I I A P Sbjct: 207 VYRLKQDFPELSFTLNGGVKSIQHARELLNTTNVDGIMIGRAAYNTPWNFRDADR 261 >UniRef50_B8F9B4 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9B4_DESAA Length = 415 Score = 71.7 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 81/260 (31%), Gaps = 35/260 (13%) Query: 11 DVRDGQV-VKGV---QFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS----------- 55 DV++ + VK Q + D V A+ + G D + + Sbjct: 126 DVKEKVMGVKPRPLTQREIKQAAEDYVRSAEICEQAGFDGVQIHAGHGYLINQFLTPYTN 185 Query: 56 ----SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGAD----KISINSPA 106 G S+V R+ +++I + GI+ + I+ GAD + +++ Sbjct: 186 RRDDQYGG----SFVKRLRLLLEIYW----GIRERTNLTVIMKINGADYLPGRQGLSTAQ 237 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 L + I + ++ V ++ + G + E + Sbjct: 238 LVEVARILQEEGLDALEVTVGHYESGFPMIRGNFGPFFKGLMEEGIGPQLPWFRRFGITC 297 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + I + + G++L ++ ++ +P+I GG T EH +A D Sbjct: 298 FRHPLAYIFDH---IWPAQEGFNLHYAREFKKKLSIPVICVGGFLTREHMEQAIDGGACD 354 Query: 227 GALAASVFHKQIINIGELKA 246 + Sbjct: 355 AVSVGRAMIADPYLFRNILN 374 >UniRef50_Q5ZVH8 Zinc binding TIM barrel protein, YjbN family n=6 Tax=Legionella RepID=Q5ZVH8_LEGPH Length = 334 Score = 71.3 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 24/197 (12%), Positives = 63/197 (31%), Gaps = 14/197 (7%) Query: 72 VIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + + G KS + A G ++I++N +D R + V Sbjct: 63 EHPLAIQLGGADKSALVKCAIIAEQKGFNEINLNLGCPSDKVQAGRFGACLMKEPEHVAD 122 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY- 188 + V T + + + + + G +++++ Sbjct: 123 CIRAIKQVVGIPVTAKTRIGIDNQDSYEFFRSFSLHLVEAGCDKLIIHARKAWLNGLNPK 182 Query: 189 --------DLEQLKKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + + + ++++ H+ + +G T+E + VDG + + Sbjct: 183 QNRTIPPVNYDYVYELKKEIPHIFITINGNILTVEEINNHLKH--VDGVMLGRLACDNPY 240 Query: 240 NIGELKAYLATQGVEIR 256 I E+ L + ++I+ Sbjct: 241 QIAEIHQALYPEFIKIK 257 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 41/116 (35%), Gaps = 12/116 (10%) Query: 19 KGVQFRNHEIIGDIVP-LAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSR 68 K +++ + + E G D+L+ + A +G V+ +V Sbjct: 138 KTRIGIDNQDSYEFFRSFSLHLVEAGCDKLIIHARKAWLNGLNPKQNRTIPPVNYDYVYE 197 Query: 69 VAEVIDIPFC-VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + I F + G I ++E+ L D + + A +P I + + Sbjct: 198 LKKEIPHIFITINGNILTVEEINNHLKH-VDGVMLGRLACDNPYQIAEIHQALYPE 252 >UniRef50_C0N3H2 Histidine biosynthesis protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3H2_9GAMM Length = 237 Score = 71.3 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 71/255 (27%), Gaps = 36/255 (14%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAK-RYAEEGADELVFYDIT 53 +IIP +D+R G VV D+ + ++ D+ Sbjct: 1 MQIIPVIDIRGGIVVHARGGNRDAYSALNSVLTRSTDVFQVVNDILNWYPFEQFYIADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 A + + + V F + GI S +D L Sbjct: 61 AIEAAKHRPEFYAELVHCFTGTQFWLDAGITSQKDLR----------------LYSKLHN 104 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 ++ + ++ ++ +++ T W ++ Sbjct: 105 LKIVIGSETLKSLSLLEIEGARQSMILSLDRRGKQLLGAHNLLHRTELWTEQTIVMDLDV 164 Query: 174 IVLNMMNQDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 I N G LE L+ + + + A+GG + + G L AS Sbjct: 165 IGAN--------QGPSLEWLQALIAQRPDIEWYAAGGVRNKADLEQ-LQKIRAAGTLIAS 215 Query: 233 VFHKQIINIGELKAY 247 H I+ EL+ Sbjct: 216 ALHTGQIDKAELQKI 230 >UniRef50_A8ICF9 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8ICF9_CHLRE Length = 198 Score = 71.3 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 1/101 (0%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLI 205 + V + + GA + ++ + D ++ +V VP+I Sbjct: 47 KIRLGENDKKIVVDTVVDYLHRAGAAAVTVHGRTAEQRYKKAADWAKVGEVARSTPVPII 106 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +G T ++ +A + E K Sbjct: 107 GNGDILTHYEAHARRTESGCTAVMAGRGALIKPWIFQEYKE 147 Score = 69.0 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 42/154 (27%), Gaps = 7/154 (4%) Query: 15 GQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAE 71 VK N + ++ +V GA + + TA + D + V VA Sbjct: 43 PVTVKIRLGENDKKIVVDTVVDY---LHRAGAAAVTVHGRTAEQRYKKAADWAKVGEVAR 99 Query: 72 VIDIPFCVAGGIKS-LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 +P G I + E A+ G + AL P + + Sbjct: 100 STPVPIIGNGDILTHYEAHARRTESGCTAVMAGRGALIKPWIFQEYKEGREWLPSTEERV 159 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 Y + + R + + + Sbjct: 160 GVYRLLVSYMKEHFGDDERGRRKAWYFFPWHFDF 193 >UniRef50_C0NEG2 tRNA-dihydrouridine synthase n=5 Tax=Ajellomyces RepID=C0NEG2_AJECG Length = 583 Score = 71.3 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 6/95 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IP 76 +FR E + A+ GA + + G D S++ + E + Sbjct: 189 KFRIQETKEKTLEYARIILSAGASIITVHGRRREQKGHNTGLADWSYIRYLRENLPADTV 248 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 G I + D K L GAD + +L DP Sbjct: 249 IFANGNILNHGDIEKCLEATGADGVMSAEGSLCDP 283 Score = 70.5 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 49/160 (30%), Gaps = 9/160 (5%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA+ + D + +N ++ T ++ Sbjct: 132 QAARAVEPFCDAVDLNLGCPQGIARKGHYGAFLQEHPDLIYE----LINTLHTQLSIPVT 187 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVC--HV 202 + R + T+ +TL++ + + GA I ++ ++ + D ++ +RE Sbjct: 188 AKFRIQETKEKTLEYARIILSAGASIITVHGRRREQKGHNTGLADWSYIRYLRENLPADT 247 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + A+G + DG ++A Sbjct: 248 VIFANGNILNHGDIEKCLEATGADGVMSAEGSLCDPTIFS 287 >UniRef50_A0EAZ6 Chromosome undetermined scaffold_87, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0EAZ6_PARTE Length = 346 Score = 70.9 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 51/196 (26%), Gaps = 19/196 (9%) Query: 72 VIDIPFCVAGGIKSLE----DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 + + G E A G D+I++N ++ + +V Sbjct: 64 EHPVVCQLGG--NDPEKLAKAAQIAEQAGFDEINLNVGCPSERVQDGAFGACLMKEPHLV 121 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG-AGEIVLNMMNQDGVRN 186 E K + ++V+ V K G +++ Sbjct: 122 AQCMKKMKEAVKIPCTLKCRLGVDNLDSYEFVRNFVEIVYKEGEVNHFIMHARKAFLKGL 181 Query: 187 GYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + + +++ E + +GG EH + +VDG + H+ Sbjct: 182 NPHENRTVPPLKYDWVYQLKKEFPEIKFTLNGGIKCTEHIDQVL--PNVDGIMIGRSAHE 239 Query: 237 QIINIGELKAYLATQG 252 + Sbjct: 240 NPWMFSDFDRLYYGGE 255 >UniRef50_C8X0F5 Dihydrouridine synthase DuS n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0F5_DESRD Length = 341 Score = 70.9 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 38/161 (23%), Gaps = 3/161 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 A +I G + IN DA + Sbjct: 92 TMAAAARRIQDEGFFGVDINMGCCVAAVRQQGAGAALLRDISRAAA--IVDAVRQAVDIP 149 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHV 202 + S + + K GA ++++ D ++ V E + Sbjct: 150 LFVKLRSGWTDQGPVVVHAARACAKAGADALIVHPRLAPDRRTRPPQWRDIRAVCEAVDL 209 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 P+ +G T + R G + + E Sbjct: 210 PVFGNGNVFTADDATAMLRQTGCQGIALGRMAAARPWIAAE 250 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 5/135 (3%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVS 67 +D+ VK + +V A+ A+ GAD L+ + A R + Sbjct: 145 AVDI--PLFVKLRSGWTDQGPV-VVHAARACAKAGADALIVHPRLAPDRRTRPPQWRDIR 201 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIV 126 V E +D+P G + + +DA +L G I++ A A P + F Sbjct: 202 AVCEAVDLPVFGNGNVFTADDATAMLRQTGCQGIALGRMAAARPWIAAEWLGHFHPAPET 261 Query: 127 VGIDTWYDAETGKYH 141 E Sbjct: 262 YPKVAQRMVELLWTS 276 >UniRef50_A8F480 Dihydrouridine synthase DuS n=1 Tax=Thermotoga lettingae TMO RepID=A8F480_THELT Length = 305 Score = 70.9 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 9/187 (4%) Query: 61 VDKSWVSRV--AEVIDIPFCVAG-GIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + V R+ + ++ + G K+L AAKI+ A I IN+ + Sbjct: 33 RNFKTVQRMLPKDEPNVAVQLFGNDPKTLAQAAKIVEPYAAWIDINAACPVKKVIKKNSG 92 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + + V + R + V K GA I ++ Sbjct: 93 GALLNDLERLEKIIGSVKSSVQKPV----TVKIRIGFEKNILDQIVHSCIKAGADGIEVH 148 Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 +G LK + SG E F +A + + AL A ++ Sbjct: 149 GRTVVQKYSGKAFWDLK--LSQYGISTAVSGDIFEAEDFHKALEMSGANSALIARGALRK 206 Query: 238 IINIGEL 244 ++ Sbjct: 207 PWIFAQI 213 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 45/151 (29%), Gaps = 6/151 (3%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE 71 V+ VK I+ IV + GAD + + T + Sbjct: 113 VQKPVTVKIRIGFEKNILDQIVH---SCIKAGADGIEVHGRTVVQKYSGKAFWDLKL--S 167 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 I V+G I ED K L GA+ I AL P + ++ + + + Sbjct: 168 QYGISTAVSGDIFEAEDFHKALEMSGANSALIARGALRKPWIFAQITQKRTPKITEIKET 227 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 + + + + R V + Sbjct: 228 FTKHLKMQIEDEGERSIYKMRQFVAGYTHGM 258 >UniRef50_Q0G4J3 HisA/HisF family protein, putative n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G4J3_9RHIZ Length = 237 Score = 70.5 bits (171), Expect = 4e-11, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 76/246 (30%), Gaps = 33/246 (13%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEII---------GDIVPLAKRYA-EEGADELVFYDI 52 A ++IP LD+ +G VV+G R + V +A+ G D + D+ Sbjct: 7 AMQLIPVLDLMNGLVVRGEGGRRESYRPIETPLADGAEPVAVARGLIGATGTDVMYVADL 66 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + G + + E D + G I +A L Sbjct: 67 D-AIMGGEAQVPVLQALGEAFP-------------DLRFWVDAGFQTIDAAEALIAAVAL 112 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 V G +T + E + ++ + A Sbjct: 113 GAG------RIVPVFGTETLDETEALARMDGPAVLSLDFGAEGYRGSPALLEGAELWPAD 166 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHV-PLIASGGAGTMEHFLEAFRDADVDGALAA 231 +V+ + G G D ++L+++ + A+GG +A V GAL A Sbjct: 167 -VVVMSLAAVGSSGGPDFQRLEEIVARAGTRRVHAAGGVRGRTDL-DALAAMGVAGALVA 224 Query: 232 SVFHKQ 237 S H + Sbjct: 225 SALHNR 230 >UniRef50_A1HS67 Indole-3-glycerol-phosphate synthase n=4 Tax=Veillonellaceae RepID=A1HS67_9FIRM Length = 293 Score = 70.5 bits (171), Expect = 4e-11, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 59/220 (26%), Gaps = 36/220 (16%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LAK Y GA L + G + D V V ++P I + + Sbjct: 98 ELAKIYTAHGATALSVLT-DSHFCGALADIEAVRAV---TELPILRKDFIVDVYQIYEAR 153 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + GAD + + + L+D Sbjct: 154 AVGADAVLLIAGILSD---------------------------GELEEFLTVAHGIGLDC 186 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP--LIASGGAG 211 + + + VQ+ A + +N N DL + C +I+ G Sbjct: 187 LVEVHNEVELNRVQQTPALLVGINNRNLKTFT--VDLMTTFSLLPHCDKRRIIISESGVK 244 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 T E L + A V G L K + + Sbjct: 245 TGEDALR-LKAAGVQGILVGEGLVKAENIAAKTRELALAN 283 >UniRef50_B2S5Z1 Indole-3-glycerol phosphate synthase n=45 Tax=Alphaproteobacteria RepID=TRPC_BRUA1 Length = 268 Score = 70.5 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 61/227 (26%), Gaps = 33/227 (14%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D LAK Y E GA L T S G +++ + +P + Sbjct: 72 RPDFDPPALAKAYEEGGAACLSVLTDTPSFQGAP---EFLTAARQACSLPALRKDFLFDP 128 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + S+GAD I I ++ D + Sbjct: 129 YQVYEARSWGADCILIIMASVDD---------------------------DLAKELEDTA 161 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLI 205 + + ++ K + + +N N E+L K+ + L+ Sbjct: 162 FALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRL-LV 220 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 G T E L + + L +Q +A L Sbjct: 221 GESGIFTHEDCLR-LEKSGIGTFLIGESLMRQHDVAAATRALLTGAE 266 >UniRef50_C2KZB3 Indole-3-glycerol-phosphate synthase n=1 Tax=Oribacterium sinus F0268 RepID=C2KZB3_9FIRM Length = 284 Score = 70.5 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 34/236 (14%), Positives = 66/236 (27%), Gaps = 42/236 (17%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFC 78 KG+ + + +AK Y G D + +T D ++ +A + +P Sbjct: 86 KGIIAEDFPY----LQIAKDYEAAGIDAIS--CLTEPKYFLGKD-QYLQEIAHAVSVPVL 138 Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 + + GA I + L + Sbjct: 139 RKDFLIDPYQIYQAKLLGAKAILLIVSLLGE---------------------------RE 171 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVRE 198 G + + + ++ GA I +N N ++E +R Sbjct: 172 LKEFLSIAGKLGLDALVECHDEEEIRCALSVGAEIIGVNNRNLKTF--SVNMENSLSLRN 229 Query: 199 VCHV--PLIASGGAGTMEHFLEAFRDADVDGALAASVFHK---QIINIGELKAYLA 249 + +A G E +A VDG L + + + EL++ L Sbjct: 230 LVPKGQLFVAESGMSKPEEL-RLLEEAGVDGVLIGESLMRAESKKEKLQELRSLLK 284 >UniRef50_Q9KT00 tRNA-dihydrouridine synthase C n=75 Tax=Gammaproteobacteria RepID=DUSC_VIBCH Length = 323 Score = 70.5 bits (171), Expect = 5e-11, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 49/165 (29%), Gaps = 3/165 (1%) Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 E+A + GA I +N A ++ ++ + H+ Sbjct: 76 WMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQVVKACRDAVPAHIP 135 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR--NGYDLEQLKKVREVCH 201 + + V V + A E+ ++ + G + + ++R+ C Sbjct: 136 VSAKIRLGWE-DPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHYIDQIRQKCS 194 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +PLIA+G + VD + +K Sbjct: 195 IPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKH 239 Score = 70.1 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 5/187 (2%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD--KSWVSRVAEVIDIP 76 K E D + A+ ADEL + T + + + ++ ++ + IP Sbjct: 139 KIRLGW--EDPEDCFEIVDAVAQAKADELTVHARTKAGGYKASEIKWHYIDQIRQKCSIP 196 Query: 77 FCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 G + + D + G D + + AL P L + +D Sbjct: 197 LIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNLGNVVKHNHAAMPWHEVVDLLLRY 256 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 + ++ +R + + + L + + +QL Sbjct: 257 TQFEVRGDKGKYYPNRIKQWFAYLRHAYPQANELFGELRTLTQVEPIVDQLHRYRDQLHH 316 Query: 196 VREVCHV 202 V Sbjct: 317 AAAELPV 323 >UniRef50_B0MC46 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MC46_9FIRM Length = 644 Score = 70.5 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 47/153 (30%), Gaps = 9/153 (5%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG--------RVVDKSWVSRVAEVIDI 75 I D V AK + GAD + +A+ + ++V + + + Sbjct: 228 NGGNKIEDAVVYAKLAEKAGADAIHISTGSAAGGNIVTTYYTDPGFNVENAAKVKKAVHV 287 Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 P G I A +I+ G AD IS+ ++ D ++ + + Sbjct: 288 PVICVGRINDPALAEEIIESGQADLISLGRQSICDSEFPNKIYEGREEEIFHCTGCMQRC 347 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + E ++E + Sbjct: 348 YYSPGCDELDQGISCMINPFSGKEGRWTIKEAE 380 Score = 43.2 bits (100), Expect = 0.008, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 8/94 (8%) Query: 166 VQKRGAGEIVLNMMNQD--------GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 +K GA I ++ + G+++E KV++ HVP+I G Sbjct: 243 AEKAGADAIHISTGSAAGGNIVTTYYTDPGFNVENAAKVKKAVHVPVICVGRINDPALAE 302 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 E D ++ + Sbjct: 303 EIIESGQADLISLGRQSICDSEFPNKIYEGREEE 336 >UniRef50_Q9ZLB6 Probable tRNA-dihydrouridine synthase n=23 Tax=Epsilonproteobacteria RepID=DUS_HELPJ Length = 328 Score = 70.5 bits (171), Expect = 6e-11, Method: Composition-based stats. Identities = 18/186 (9%), Positives = 57/186 (30%), Gaps = 4/186 (2%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSL-EDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + ++G +S+ ++A + ++ D +S P Sbjct: 53 KMLEKSPLEDHFMAQISGSKESVVKEAVEKINA-LDHVSGIDFNCGCPAPKVANHGNGSG 111 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQD 182 + + + T + R + + + +V++ + Sbjct: 112 LLKDLNHLVEILKVIRENTNKKITSVKVRLGFEKKIPKEIAHALNDAPVDYVVVHGRTRS 171 Query: 183 GVRNG--YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 D E + ++++ P+IA+G +++ E + DG + + Sbjct: 172 DRYQKDKIDYESIALMKKILKKPVIANGEIDSVKKAFEVLQITQADGLMIGRATLRAPWI 231 Query: 241 IGELKA 246 +++ Sbjct: 232 FWQIRN 237 Score = 64.4 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 6/130 (4%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR--VVDKSWVSRVAEVID 74 VK +I +A + D +V + T S + +D ++ + +++ Sbjct: 136 SVKVRLGFEKKI---PKEIAHALNDAPVDYVVVHGRTRSDRYQKDKIDYESIALMKKILK 192 Query: 75 IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 P G I S++ A ++L AD + I L P + ++ + VV D Sbjct: 193 KPVIANGEIDSVKKAFEVLQITQADGLMIGRATLRAPWIFWQIRNNTTELPAVVKKDLVL 252 Query: 134 DAETGKYHVN 143 + Sbjct: 253 EHFDKMVEFY 262 >UniRef50_A8ZZX0 Indole-3-glycerol phosphate synthase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=TRPC_DESOH Length = 263 Score = 70.1 bits (170), Expect = 6e-11, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 60/219 (27%), Gaps = 33/219 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D A +Y GA + G + D + + + +P I S Sbjct: 75 DPADCAAKYEAGGAAAISVLTDAPYFKGSLSD---LKQARKACSLPVLRKEFILSDYQVY 131 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GAD + + L +T + Sbjct: 132 ESAAAGADAVLLIVRIL---------------------------TQTMLSDLIGLCRALG 164 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGG 209 + + + ++ GA I +N + + + + V + +A+ G Sbjct: 165 LDTLVEIHDENDLETATNAGAKLIGINNRDLKTFKTDIAVA-TRLVSNFGPDQVPVAASG 223 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 G+ E + A + L + + LK L Sbjct: 224 IGSREDIERT-KAAGIYNFLIGESLVRAEDTVSFLKQLL 261 >UniRef50_Q30SM1 Indole-3-glycerol phosphate synthase n=31 Tax=Epsilonproteobacteria RepID=TRPC_SULDN Length = 263 Score = 70.1 bits (170), Expect = 6e-11, Method: Composition-based stats. Identities = 32/218 (14%), Positives = 63/218 (28%), Gaps = 33/218 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y GA + G + +++++ + IP I + Sbjct: 73 DPIAIAQSYEIGGASAISILTEPHFFQG---NLDYLAQIRRYVSIPLLRKDFIVTKYQIL 129 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + L GAD I + + AL+ + YT Sbjct: 130 EALVHGADFILLIAAALSK---------------------------AELKELLGYTRHLG 162 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVCHVPLIASGG 209 + + + + G+ I +N N +L L + + ++A G Sbjct: 163 MEALVEVHDKSDLVKAIYAGSDIIGINHRNLQTFEMNMNLSYELIPLIPNGKI-IVAESG 221 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + A VD L ++ LK Sbjct: 222 IYEHGQLED-LSKAGVDAFLVGESLMREDDEEAALKKL 258 >UniRef50_Q9VY45 CG1434 n=20 Tax=Arthropoda RepID=Q9VY45_DROME Length = 473 Score = 70.1 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 4/108 (3%) Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVR 197 ++ + R T+D VQ++ G I ++ +D E L+ V Sbjct: 158 CSGLDIPVTCKIRILPDVEGTIDLVQKLAATGIAAIGIHARTRDERPQHPAHPEVLRAVA 217 Query: 198 EVCHVPLIASGG---AGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +P+IA+GG + + + D + A + Sbjct: 218 QAVDIPIIANGGSKNMHCYDDLRKFQMECGADSVMVARAAQINVSIFR 265 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 10/174 (5%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSR 68 LD+ K + + L ++ A G + + T + Sbjct: 161 LDI--PVTCKIRI---LPDVEGTIDLVQKLAATGIAAIGIHARTRDERPQHPAHPEVLRA 215 Query: 69 VAEVIDIPFCVAGG---IKSLEDAAKI-LSFGADKISINSPALADPTLITRLADRFGVQC 124 VA+ +DIP GG + +D K + GAD + + A + ++ + Sbjct: 216 VAQAVDIPIIANGGSKNMHCYDDLRKFQMECGADSVMVARAAQINVSIFRPEGLLPMDEL 275 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 I + D + ++ R ++Q + EI Sbjct: 276 IEKYLRLCVDYDNAPHNAKYCVQSILRELQETPRGKRFLQCQTLQQICEIWELG 329 >UniRef50_UPI0001744BDA indole-3-glycerol-phosphate synthase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744BDA Length = 264 Score = 70.1 bits (170), Expect = 7e-11, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 67/219 (30%), Gaps = 35/219 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y + GA+ L GR +++ + + + IP I Sbjct: 70 DYLTIARTYEKGGANALSVLTDEKYFQGR---LEYMTTIRQEVSIPVLRKDFIIHEVQIH 126 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GAD I + AL PTL L G Q V+ Sbjct: 127 EAVVAGADAILLIVAALDQPTLEHLLEVAHGCQLDVLM---------------------- 164 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI--ASG 208 + L ++ + +N N DL + + E +I + Sbjct: 165 -----EVHDLPELERALATDVRILGINNRNLKSFT--VDLATTEALAEEVPDDVILVSES 217 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 G T++ A + L + + +++ Sbjct: 218 GIKTVDDAAR-LAIAGANALLVGETLMRAANPLDMVRSL 255 >UniRef50_B0NZZ2 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0NZZ2_9CLOT Length = 263 Score = 70.1 bits (170), Expect = 8e-11, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 60/231 (25%), Gaps = 37/231 (16%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + E V +A Y + GA + +T + + + + +DIP Sbjct: 66 KGVIAEDFR-PVEIAIAYEDAGAAAIS--CLTEEHYFKGGS-KYFADIRAKVDIPMLRKD 121 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I + GAD I + + L++ Sbjct: 122 FIFDEYQIYEAKVLGADAILLIAAILSEE---------------------------KIKE 154 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH 201 + + +++V G I +N N DL K+ + Sbjct: 155 FYDLAKSLEIDCLVEVHNEKELKKVVACGCDIIGINNRNLKTF--DVDLNTTSKLAPLIP 212 Query: 202 VP--LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 L++ G D L F + NI E L + Sbjct: 213 YEAVLVSESGMKDENDMKNVKEQ-GADAVLIGETFMRS-DNIKETMKQLRS 261 >UniRef50_P03964 Indole-3-glycerol phosphate synthase n=11 Tax=Bacillus RepID=TRPC_BACSU Length = 249 Score = 69.7 bits (169), Expect = 8e-11, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 65/221 (29%), Gaps = 34/221 (15%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK Y AD + T G ++S V + IP I SL + Sbjct: 62 PVQIAKDYEAAKADAISVLTDTPFFQGENS---YLSDVKRAVSIPVLRKDFIDSL-QVEE 117 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 GAD I + L DP + L G + + V ++ + + Sbjct: 118 SRRIGADAILLIGEVL-DPLHLHELYLEAGEKGMDVLVEVHDASTLEQILKVFTP----- 171 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL-EQLKKVREVCHVPLIASGGA 210 + +N N EQ+ + + L++ G Sbjct: 172 --------------------DILGVNNRNLKTFETSVKQTEQIASLVPKESL-LVSESGI 210 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 G++EH + L +Q + + L + Sbjct: 211 GSLEHLT-FVNEHGARAVLIGESLMRQT-SQRKAIHALFRE 249 >UniRef50_C8PLW3 Putative dihydrouridine synthase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PLW3_9SPIO Length = 347 Score = 69.7 bits (169), Expect = 9e-11, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 28/102 (27%), Gaps = 2/102 (1%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLI 205 L + + + G I ++ Q E + + +P+ Sbjct: 141 KLRIGAAADYAYLLRFCTMLVEEGVQLITIHPRLQRQSYARPALHEYTAALAKDLPIPVY 200 Query: 206 ASGGAGTMEHFL-EAFRDADVDGALAASVFHKQIINIGELKA 246 +G + E A R G + ++ E++ Sbjct: 201 GNGDIDSAEKLQTAAARYPACTGWMIGRAAVQKPWIFKEIRK 242 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 4/107 (3%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVID 74 VK + ++ EEG + + S R + + +A+ + Sbjct: 138 LSVKLRIGAAADYAY-LLRFCTMLVEEGVQLITIHPRLQRQSYARPALHEYTAALAKDLP 196 Query: 75 IPFCVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADR 119 IP G I S E + I A+ P + + R Sbjct: 197 IPVYGNGDIDSAEKLQTAAARYPACTGWMIGRAAVQKPWIFKEIRKR 243 >UniRef50_A7NDQ7 tRNA dihydrouridine synthase n=17 Tax=Francisella RepID=A7NDQ7_FRATF Length = 327 Score = 69.7 bits (169), Expect = 9e-11, Method: Composition-based stats. Identities = 19/219 (8%), Positives = 59/219 (26%), Gaps = 22/219 (10%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-----GIKSLEDAAKILSFGADKISIN 103 + A G + + + + G I + A ++I+IN Sbjct: 38 MVTLNAILHGNKEFL--LKYNPQENPVTLQLGGCVPKDFISCGKLAE---ELDYNEININ 92 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 ++ + +V + ++ + E ++V Sbjct: 93 VGCPSERVKKGNFGLSLMAEPELVADCVKAMKDNLNIPISVKCRIGYDHNDSYEELYNFV 152 Query: 164 QEVQKRGAGEIVLNMMNQDGVRNGYD---------LEQLKKVRE-VCHVPLIASGGAGTM 213 + + G + ++ + + +++ ++ L +GG T+ Sbjct: 153 DKQVQAGIDYLCIHARKGWLSGLSPKENRTIPELKYDVVYSIKKDFPNLELGINGGITTI 212 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + + + VD + + + + Q Sbjct: 213 QEIQQHLKY--VDSVMIGREAYHNPMLFKDFDNIFYNQP 249 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 12/121 (9%) Query: 15 GQVVKGVQFRNHEII-GDIVPLAKRYAEEGADELVFYDITASSDG-RVVD--------KS 64 VK +H ++ + + G D L + G + Sbjct: 130 PISVKCRIGYDHNDSYEELYNFVDKQVQAGIDYLCIHARKGWLSGLSPKENRTIPELKYD 189 Query: 65 WVSRVAEVIDIPFCV-AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 V + + GGI ++++ + L + D + I A +P L + F Q Sbjct: 190 VVYSIKKDFPNLELGINGGITTIQEIQQHLKY-VDSVMIGREAYHNPMLFKDFDNIFYNQ 248 Query: 124 C 124 Sbjct: 249 P 249 >UniRef50_D0P0N4 tRNA-dihydrouridine synthase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0P0N4_PHYIN Length = 480 Score = 69.7 bits (169), Expect = 9e-11, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 53/173 (30%), Gaps = 14/173 (8%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AA+ ++ + IN ++ + + V V Sbjct: 95 AAEAVARDVAAVDINMGCPKHFSVQGGMGAALLRKPEVACDIMKTLRRNLNIPV----SC 150 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPLIAS 207 + R +T+D + ++ GA + ++M + + ++L V VP++A+ Sbjct: 151 KIRLLPEIQDTVDLARRLEDAGACAVGVHMRQTHERPHDKASWDRLAPVVSALSVPVLAN 210 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE---------LKAYLATQ 251 G E + + + L A + ++ YL Sbjct: 211 GDVFMHEDINKLRKLSGASSFLIARGALANPSIFRKEGRLPIDQVVREYLKAA 263 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 5/103 (4%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVI 73 K I D V LA+R + GA + + T ++ V + Sbjct: 147 PVSCKIRL---LPEIQDTVDLARRLEDAGACAVGVHMRQTHERPHDKASWDRLAPVVSAL 203 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITR 115 +P G + ED K+ GA I ALA+P++ + Sbjct: 204 SVPVLANGDVFMHEDINKLRKLSGASSFLIARGALANPSIFRK 246 >UniRef50_A9KE93 Indole-3-glycerol phosphate synthase n=4 Tax=Coxiella burnetii RepID=A9KE93_COXBN Length = 257 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 59/223 (26%), Gaps = 36/223 (16%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 I D V LAK+Y + GA + + DG + D VS + I Sbjct: 64 IADPVALAKQYVQGGAAGVSVLTDKLAFDGSIRDLQQVSLELRDRPVAVLRKDFILDPLQ 123 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + GAD I + L D + Q + Sbjct: 124 IEEAAVAGADAILLIVAILKD----------------------------ATKTLLQKADE 155 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI--A 206 + + + + + GA I +N N + K++ +I A Sbjct: 156 CGLEALVEVHNRQELDQAIEIGAEIIGVNNRNLTTFSVDPNNAL--KLKPYIPDHIISVA 213 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFH--KQIINI-GELKA 246 G T+ A + L + +K Sbjct: 214 ESGIHTVSDAKRYI-SAGYNAVLVGEALVKSENPQQFISAIKE 255 >UniRef50_C7NBC4 Dihydrouridine synthase DuS n=3 Tax=Leptotrichia RepID=C7NBC4_LEPBD Length = 325 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 62/224 (27%), Gaps = 10/224 (4%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDK---SWVSRVAEVIDIPFCVAGGIKSL-EDAAKI 92 K + D L + A+ R D + + G L K+ Sbjct: 18 KILEKFEPDFLFTEMVNANLLNREDDTTINELLKCDNKEKTGTQIFGGDKNELVSGILKL 77 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 +FG KI+IN + +V + Sbjct: 78 KNFGFRKININMGCPQPKIVKNGAGSALLENYELVEQVLLETQNIDAK----ISIKIRVG 133 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC-HVPLIASGGA 210 ++ K I ++ Q + +G + E ++K+ ++ ++ +G Sbjct: 134 YKDFDNPEIFLNLANKHNLDFICVHGRTQKQMYSGTANWEIVEKLSKMPRNINFFGNGDL 193 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 ++DG + + I + + +L T + Sbjct: 194 FEPSEIKRKIASCNLDGIILSRGIIGNPWLISQTREFLKTGKIN 237 Score = 53.2 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 12/112 (10%), Positives = 39/112 (34%), Gaps = 5/112 (4%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 + +K ++ + + D + + T + V +++ Sbjct: 122 IDAKISIKIRVG--YKDFDNPEIFLNLANKHNLDFICVHGRTQKQMYSGTANWEIVEKLS 179 Query: 71 EVI-DIPFCVAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADRF 120 ++ +I F G + + + ++ D I ++ + +P LI++ + Sbjct: 180 KMPRNINFFGNGDLFEPSEIKRKIASCNLDGIILSRGIIGNPWLISQTREFL 231 >UniRef50_C1QEF4 Indole-3-glycerol phosphate synthase n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QEF4_9SPIR Length = 259 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 62/230 (26%), Gaps = 36/230 (15%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + D + +AK Y GA L +T + ++ + + I IP Sbjct: 63 KGIISNDF-DYINIAKDYERAGASALS--CLTEPYYFLGSN-EYLENIKKNISIPVLRKD 118 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 + + AD + + + L Sbjct: 119 FTIDEYMIYEAKAINADAVLLIAAILDK---------------------------NQLAD 151 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY--DLEQLKKVREV 199 + + + D + + I +N N + +K + E Sbjct: 152 YFSLADSLGLSVIVEVHDEDDLNKALSSNTRIIGINNRNLKTFETSIKNTFDLIKLIPE- 210 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 ++ I+ G + E + + V+ L +Q I E+K + Sbjct: 211 -NIISISESGIKSREDI-KLLEENKVNAVLIGEQLMRQKDKIKEIKTLMG 258 >UniRef50_Q3JA76 NADH-flavin oxidoreductase/NADH oxidase n=4 Tax=Proteobacteria RepID=Q3JA76_NITOC Length = 441 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 29/262 (11%), Positives = 62/262 (23%), Gaps = 27/262 (10%) Query: 10 LDVRDGQVVK-GVQFRNHEIIGDIVPLAKRYAEEGADELVFY----------------DI 52 +D G + + + I A+R E G D + + D Sbjct: 129 MDTFHGLLCQAMTLGEIKQTIQHFADSARRAREAGLDGVELHASHGYLFTQFLSSGINDR 188 Query: 53 TASSDGRVVD-----KSWVSRVAEVI--DIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 G + + + + + + D V I +A Sbjct: 189 KDEYGGSLENRARFLLDVIHAIRKEVGDDYHLQVKINIVDENNALYPWEK--WGNKPEEY 246 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 + D V + + + + V Sbjct: 247 VQICKWVEEAGTDGLHVSAGSLFPHPLVPPGGFPLDETNWWYGSMASSGVRGYMNYTVFH 306 Query: 166 VQKRGAGEIVLNMMNQDGVR-NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + + L + G E K+V++ +P++ +GG + + + Sbjct: 307 FKILRPLFLWLWNRTKKKYPIEGVSAELCKQVKDSVTIPVLNTGGYQDGKLIRKVISEGY 366 Query: 225 VDGALAASVFHKQIINIGELKA 246 DG A L+ Sbjct: 367 CDGVAIARPLIANNDLPKVLEE 388 >UniRef50_B8C389 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C389_THAPS Length = 615 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 11/166 (6%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 AAK++ D I +N I Q + + A + + Sbjct: 159 DFAKAAKLVEKYCDAIDLNLGCPQRTAFIGHFGSYLLGQKDRKLVLSIVRAGSKAVSIPI 218 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR--------NGYDLEQLKKV 196 + R T ET E++ GA I ++ + L+Q+ V Sbjct: 219 FVK--IRLLDTVEETTKLCHELRDAGASLIAIHARYRATWERTGPGARDGPALLDQVAVV 276 Query: 197 REV-CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 ++ P+IA+G T + + + DG ++A Sbjct: 277 KQSMPDFPIIANGNVITYDDVISNKQSTGADGIMSAEGILDNPALF 322 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%), Gaps = 13/106 (12%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS--------DGRVVDKSWV 66 VK + + + L + GA + + ++ V Sbjct: 217 PIFVKIRL---LDTVEETTKLCHELRDAGASLIAIHARYRATWERTGPGARDGPALLDQV 273 Query: 67 SRVAEVID-IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 + V + + P G + + +D GAD I L +P Sbjct: 274 AVVKQSMPDFPIIANGNVITYDDVISNKQSTGADGIMSAEGILDNP 319 >UniRef50_Q3AL94 Indole-3-glycerol phosphate synthase n=13 Tax=Cyanobacteria RepID=TRPC_SYNSC Length = 295 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 64/235 (27%), Gaps = 38/235 (16%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + E D V +AK YA GA L G + V + +D+P Sbjct: 92 KGVIREDF-DPVAIAKAYASGGASCLSVLTDKTFFQGG---FDVLVEVRQAVDLPLLCKE 147 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 + S + + GAD + + + L+D L + V+ Sbjct: 148 FVLSPYQLFQARAAGADAVLLIAAILSDQDLRYLNKAAAALGLTVLVEVH---------- 197 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL------EQLKK 195 + + + + G I +N + + + Sbjct: 198 ----------------DATEMDRVLSIGGFPLIGINNRDLTSFETDLATTERLLVDFNDR 241 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +++ V L++ G + + A L +Q L + Sbjct: 242 LKQQ-GVLLVSESGLFSRADLDRV-QAAGAGAVLVGEALMRQQDVEAGLVQLIQA 294 >UniRef50_Q08111 Probable tRNA-dihydrouridine synthase n=17 Tax=Alphaproteobacteria RepID=DUS_RHOCA Length = 324 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 45/171 (26%), Gaps = 3/171 (1%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 E A + GA+ I IN A +A G + Sbjct: 82 MAEAAKIVADMGAEIIDINMGCPAKKVTGGLSGAALMRNPDHALR--LIEAVVGAVDLPV 139 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVP 203 Q + + G IV++ + G D + VR VP Sbjct: 140 TLKMRLGWDEDQLNAAEIAARAEAAGVKMIVIHGRTRMQFYTGAADWRAIAAVRAAVSVP 199 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 ++A+G A + G + + ++ A L + Sbjct: 200 VVANGDITDAASARRALDQSGAAGVMVGRGAQGAPWRLAQIAAALFGKADP 250 Score = 47.4 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 5/120 (4%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKS 64 ++ +D+ +K + + + + +A R G +V + T D Sbjct: 131 VVGAVDL--PVTLKMRLGWDEDQL-NAAEIAARAEAAGVKMIVIHGRTRMQFYTGAADWR 187 Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 ++ V + +P G I A + L GA + + A P + ++A + Sbjct: 188 AIAAVRAAVSVPVVANGDITDAASARRALDQSGAAGVMVGRGAQGAPWRLAQIAAALFGK 247 >UniRef50_C4QAZ6 tRNA-dihydrouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4QAZ6_SCHMA Length = 492 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 48/163 (29%), Gaps = 9/163 (5%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + AAK+L I +N ++ + + +V + V Sbjct: 77 TALQAAKMLENDVMGIDVNMGCPKAYSIKGGMGAALLTKPEIVKEILTTLTTNLRIPV-- 134 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVP 203 + R +T+ + ++ G I ++ + + E ++ + +P Sbjct: 135 --TCKIRILPELEKTIALAKLIESTGVAAITVHGRTINERPVHRNRNEVIQTIANSVGIP 192 Query: 204 LIASGG----AGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 ++A+GG E + G + A Sbjct: 193 VLANGGSHDIIRNHEDIEYFRQLTSAAGVVIARAAMSNPAIFK 235 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 14/103 (13%) Query: 2 LAKRIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR 59 + K I+ L ++R K + + LAK G + + T + R Sbjct: 118 IVKEILTTLTTNLRIPVTCKIRI---LPELEKTIALAKLIESTGVAAITVHGRT--INER 172 Query: 60 VVDK---SWVSRVAEVIDIPFCVAGG----IKSLEDAAKILSF 95 V + + +A + IP GG I++ ED Sbjct: 173 PVHRNRNEVIQTIANSVGIPVLANGGSHDIIRNHEDIEYFRQL 215 >UniRef50_C4KZ66 Indole-3-glycerol phosphate synthase n=1 Tax=Exiguobacterium sp. AT1b RepID=TRPC_EXISA Length = 253 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 62/219 (28%), Gaps = 33/219 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D+ A++Y + GA + T +G + +VA+V+ IP I Sbjct: 60 DVAKRARQYEKAGATMISVLTDTTYFNGS---FDDLRQVADVVTIPVLCKDFIIDERQLD 116 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 +GA + AL L + +Y Sbjct: 117 YAKHYGASVALLIVAALHPTRLH---------------------------ELTRYARSIG 149 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 + + ++ + I +N + + + ++ V ++ G Sbjct: 150 LDVLVEVHDEAELRIALELDDVLIGINNRDLKTFEVSLETS-IDLMKRYPEVTFVSESGV 208 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 T+E ++A L ++ I L L Sbjct: 209 STVEAAAR-LQEAGASAILVGEALMREEDPIR-LLEELK 245 >UniRef50_A6RVN2 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6RVN2_BOTFB Length = 1174 Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 6/103 (5%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IP 76 + R + + AK GA L + T G + + + E + + Sbjct: 799 KIRILDTREKTLDYAKMVISAGASILTVHGRTREMKGHKTGLANWEMLRFLRESLPKEVV 858 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLAD 118 V G I + ED L GAD + L DPT+ + Sbjct: 859 LFVNGNILAREDIDDCLKATGADGVMSAEGNLYDPTIFSDAPA 901 Score = 69.0 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 43/125 (34%), Gaps = 5/125 (4%) Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV 184 + T ++ + R T+ +TLD+ + V GA + ++ ++ Sbjct: 775 FHDTWPSQELINTLHKELDVPVTAKIRILDTREKTLDYAKMVISAGASILTVHGRTREMK 834 Query: 185 RNG---YDLEQLKKVREVCHVPLI--ASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + + E L+ +RE ++ +G E + + DG ++A Sbjct: 835 GHKTGLANWEMLRFLRESLPKEVVLFVNGNILAREDIDDCLKATGADGVMSAEGNLYDPT 894 Query: 240 NIGEL 244 + Sbjct: 895 IFSDA 899 >UniRef50_C4Z9Z2 Imidazole glycerol phosphate synthase subunit HisF, putative n=3 Tax=Clostridiales RepID=C4Z9Z2_EUBR3 Length = 427 Score = 69.0 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 85/228 (37%), Gaps = 16/228 (7%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 K I+ L +++GQ VK + ++GD+ L + Y + G D+++ +D++ D + Sbjct: 5 KNIVATLYLKNGQAVKSAS--DMTVMGDVYNLCQLYNDSGIDKIIIFDLSTDDDEHEKNI 62 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + IDI C G I +ED K+L G ++ N+ + L +++FG Sbjct: 63 HTIENINRNIDIKVCAGGNINRIEDVKKLLYAGCLQVIFNATKDSSLELANVASEKFGKD 122 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 I++ I + + + + + L+ L Sbjct: 123 KILLSISNVDYIFKHQEEIEDTFHELLVLNIDIIDALE-------------NLTSTPYVV 169 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTME-HFLEAFRDADVDGALA 230 +D++++ V + + IA E + G L Sbjct: 170 YMPQFDMDKIIDVMKRETLRGIAGEFINDPENDIMALKTKLSDGGILV 217 >UniRef50_A1AT39 Dihydrouridine synthase, DuS n=7 Tax=Desulfuromonadales RepID=A1AT39_PELPD Length = 342 Score = 69.0 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 54/193 (27%), Gaps = 10/193 (5%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIK----SLEDAAKILSFGADKISINSPALADPTLIT 114 D + + + + + G + S AA+ GA I++N P Sbjct: 79 SAADLAEAGSAGDDVPLVVQLIGHGREALVSGSQAAQ--DAGAAHINLNMGC---PYGRM 133 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 G + K ++ + D + + G + Sbjct: 134 TSGQTGGGMLRSPQELSSIIPALRKTIRGTFSIKLRSGYDNPRQIFDLLPLFEASGVDFL 193 Query: 175 VLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 VL+ G+ D + + +P+IA+G ++ R+ G + Sbjct: 194 VLHPRTVLQKYAGFADHGITAEAVQRSTLPIIANGDIRSVATGRHVLRETGAAGLMLGRG 253 Query: 234 FHKQIINIGELKA 246 + L+ Sbjct: 254 AISDPLLFQRLRN 266 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 54/196 (27%), Gaps = 9/196 (4%) Query: 6 IIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VD 62 IIP L +R +K + I L + G D LV + T D Sbjct: 152 IIPALRKTIRGTFSIKLRSGYD--NPRQIFDLLPLFEASGVDFLVLHPRTVLQKYAGFAD 209 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFG 121 + + +P G I+S+ +L GA + + A++DP L RL + Sbjct: 210 HGITAEAVQRSTLPIIANGDIRSVATGRHVLRETGAAGLMLGRGAISDPLLFQRLRNCAP 269 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + T ++ + + Sbjct: 270 PDPQPQERAAMLSRYLDELLTRYQTLFCGEAQILGKIKEIVSTIHEPAFEKGFH---RLK 326 Query: 182 DGVRNGYDLEQLKKVR 197 R E L ++ Sbjct: 327 KARRIEAFRELLAELA 342 >UniRef50_C1ZC07 HisA/hisF family protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZC07_PLALI Length = 296 Score = 69.0 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 77/273 (28%), Gaps = 41/273 (15%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAE-EGADELVFYDITAS 55 ++P +D R+G V + LA+ ++ L D+ Sbjct: 23 VVPVIDTRNGWAVHAIAGNRALYRPWTDSFQQPRKPQQLAEEFSRVWQPRWLYVADLDGI 82 Query: 56 SDGRVVD--KSWVSRVAEVIDIPFCV-AGGIKSLEDAAKILSFGADKISIN-----SPAL 107 DG+ + D P + G + ++D ++ G + I L Sbjct: 83 IDGQPQTSSWPCLP-----GDGPRILMDAGFREIDDVLTAVNLGYEVILGTESLPSMAWL 137 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + + R + AE + + + S +T W LD Q Sbjct: 138 QELIVRLEDSQRLWISLDFRQGQWQAPAEFQQLGLTDFISQLSNWSMTHWIVLDLADVGQ 197 Query: 168 KRG------AGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV-----------PLIASGGA 210 G + + ++ + C ++A GG Sbjct: 198 GTGGSTAEQIRLLRETLEKSSRNWKHPAESYQSRLAQSCQHGTQVVPTERTPTILAGGGM 257 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 T + L+ + V G L A+ I + Sbjct: 258 RTAQDVLQ-LQTQGVSGVLVATALMTGTITPDQ 289 >UniRef50_B1C3U6 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3U6_9FIRM Length = 263 Score = 69.0 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 69/224 (30%), Gaps = 37/224 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D +AK Y + GA + G D +++ +A ++ IP I Sbjct: 71 DYKTIAKEYEDIGAAAISVVTEPDFFKG---DDDFLAEIARIVKIPVLRNDFIIDEYMVY 127 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD I + L + TL+ Sbjct: 128 ESKLLGADAIILLCSVLDEITLMR---------------------------CVNLAERLG 160 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASG 208 + + + + V++ + GA I +N + D++ ++R + + ++ Sbjct: 161 MSALVEAHSSMQVKKAMRVGAKIIGVNNCDLRTF--EIDMKNSIELRSMVSDDIVFVSES 218 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIG--ELKAYLAT 250 G T + + + +V+ L K E+ L Sbjct: 219 GIKTYDDI-KVLEENNVNAVLIGETLMKSHDKRKTFEILQGLRK 261 >UniRef50_A2F0D1 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2F0D1_TRIVA Length = 333 Score = 69.0 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 5/169 (2%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I + AA ++ AD I +N + +V Sbjct: 85 IFQILTNDASKAVQAASVVVKFADAIDLNCGCPESFATSRGTGSSLMSEPEIVADVVSAL 144 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQL 193 + + R E++ + + GA I ++ ++ G + + Sbjct: 145 RRNYNVPI----SVKHRIHHNIEESIQFAVACENAGASAIAVHGRLKEQKNKGSVAYDNM 200 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 K V + HV I +GG E E + + +S K Sbjct: 201 KLVFDHLHVAKIGNGGVKNREMAKEMMEKTGCESVIISSAALKNPTIFS 249 Score = 61.7 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 52/171 (30%), Gaps = 7/171 (4%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEVI 73 VK H I + + A GA + + + + V + + Sbjct: 151 PISVKHRI---HHNIEESIQFAVACENAGASAIAVHGRLKEQKNKGSVAYDNMKLVFDHL 207 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQC--IVVGID 130 + GG+K+ E A +++ G + + I+S AL +PT+ + + V+ + I Sbjct: 208 HVAKIGNGGVKNREMAKEMMEKTGCESVIISSAALKNPTIFSGHPETDPVKLARRYLEIA 267 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 Y + + R + I + Sbjct: 268 KQYGCSDRHEYRWSVNTMLGKYRHITRSPDYEPFTHLEDLDKMIEYINRDG 318 >UniRef50_C9LSI3 Indole-3-glycerol phosphate synthase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LSI3_9FIRM Length = 266 Score = 69.0 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 61/220 (27%), Gaps = 36/220 (16%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA+ YAE GA L + ++ V V ++D+P I + Sbjct: 74 ELARIYAENGASMLSVHTDPHFL---GSNEDLVR-VRSLVDLPLLRKDFIIDEYQIFEAR 129 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GAD + + + L+ L + + + Sbjct: 130 MLGADAVLLIARILSPAQLREYVFRAWEI---------------------------GLDV 162 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL--EQLKKVREVCHVPLIASGGAG 211 + + +++ A I +N N E L KV E I+ G Sbjct: 163 LVEVHDEADMKDALATPAEFIGINNRNLQTFTTSIKNTLELLPKVEESRT--FISESGIF 220 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 ++ ++A G L + + + Sbjct: 221 SVADARR-LQEAGCGGILVGEGLVRADDVAEMTRHLAEPR 259 >UniRef50_A6QPA8 DUS4L protein n=2 Tax=Eutheria RepID=A6QPA8_BOVIN Length = 238 Score = 69.0 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 30/71 (42%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 ++ R H+ + V L ++ G + + T + V + + E + IP Sbjct: 156 SIKIRIHDDLTRTVDLCRKAEATGVSWITVHGRTVEERHQPVHYEAIKIIKESMSIPIVA 215 Query: 80 AGGIKSLEDAA 90 G I+SL++A Sbjct: 216 NGDIRSLKEAE 226 Score = 64.0 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 53/153 (34%), Gaps = 1/153 (0%) Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I A + L DAA+I+ A+ I IN L + +V Sbjct: 85 IVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWALAEGYGACLINKPELVRDMVKQV 144 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + + + R T+D ++ + G I ++ + E +K Sbjct: 145 RNQVENPRFSVSI-KIRIHDDLTRTVDLCRKAEATGVSWITVHGRTVEERHQPVHYEAIK 203 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 ++E +P++A+G +++ + DG Sbjct: 204 IIKESMSIPIVANGDIRSLKEAENVWHTTGTDG 236 >UniRef50_Q2RTX4 Dihydrouridine synthase TIM-barrel protein yjbN n=3 Tax=Bacteria RepID=Q2RTX4_RHORT Length = 349 Score = 69.0 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 67/208 (32%), Gaps = 17/208 (8%) Query: 64 SWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFG 121 ++ + + + G ++L +A ++ + G +I++N +D R Sbjct: 64 RFLDHHPDEHPLALQLGGSDPRALAEATRLAAPFGFAEINLNVGCPSDRVSSGRFGACLM 123 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 +V AE V + + + +V +V + G I+++ Sbjct: 124 ADPALVAECLSAMAEASNAPVTIKHRIGIDDLDSYDQLVGFVDQVARSGIATIIVHARKA 183 Query: 182 DGVRNGYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAF-----RDADVD 226 + + +++ + + +I +GG T+ L+ VD Sbjct: 184 WLKGLSPKENREIPPLRHDVVHRLKADFPGLEVILNGGITTLTQALDHLGSGDPAAPAVD 243 Query: 227 GALAASVFHKQIINIGELKAYLATQGVE 254 G + ++ + + + + Sbjct: 244 GVMIGRAAYETPYMLAQADGLIFGEATP 271 Score = 43.2 bits (100), Expect = 0.008, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 37/134 (27%), Gaps = 17/134 (12%) Query: 15 GQVVKGVQFRNHEIIGD-IVPLAKRYAEEGADELVFYDITASSDG---------RVVDKS 64 +K + D +V + A G ++ + A G + Sbjct: 143 PVTIKHRIGIDDLDSYDQLVGFVDQVARSGIATIIVHARKAWLKGLSPKENREIPPLRHD 202 Query: 65 WVSRVAEVID-IPFCVAGGIKSLEDAAKILSFG------ADKISINSPALADPTLITRLA 117 V R+ + + GGI +L A L G D + I A P ++ + Sbjct: 203 VVHRLKADFPGLEVILNGGITTLTQALDHLGSGDPAAPAVDGVMIGRAAYETPYMLAQAD 262 Query: 118 DRFGVQCIVVGIDT 131 + Sbjct: 263 GLIFGEATPAPSRH 276 >UniRef50_Q0EWN8 Indole-3-glycerol phosphate synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWN8_9PROT Length = 264 Score = 69.0 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 61/223 (27%), Gaps = 31/223 (13%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D V +A+ YA GA L +T + + D S+V + + + +P + Sbjct: 70 RPDFDPVAIARSYASGGASCLSV--LTDVNYFQGAD-SYVRDIRKAVSLPILRKDFMLDP 126 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + + GAD I + + D T + Sbjct: 127 YQIIEAKAMGADAILVILAMVDD---------------------------TLALELTACA 159 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 D + + + ++ K + +N N D +I Sbjct: 160 RDLGLSVLPEVHNAAELERAMKLDTELMGINNRNLHTFDTTLDTTLELLGLMGDQRTVIT 219 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G T A A V G L +Q L +A Sbjct: 220 ESGIFTRNDI-AAMNAAGVYGFLIGESLMRQPEPGAALAELIA 261 >UniRef50_Q9HGN6 tRNA-dihydrouridine synthase 1 n=1 Tax=Schizosaccharomyces pombe RepID=DUS1_SCHPO Length = 399 Score = 69.0 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 54/180 (30%), Gaps = 8/180 (4%) Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 + E + G E K A L P I + ++G Sbjct: 69 RTIPEERPLIIQFCG--NDPEIMLKAAKIAAPYCDAVDVNLGCPQGIAK-KGKYGSFLQE 125 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 ++ + R +TLD+ + + K GA + ++ ++ + Sbjct: 126 NWNLIESIITKLHTELSIPVTAKIRIFPDPQKTLDYAKMILKAGASILAVHGRLREQKGH 185 Query: 187 G---YDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 D EQ++ +R+ L A+G + + VDG L+A Sbjct: 186 FTGIADWEQIQMLRKNLPSETVLFANGNILHAQDIDRCIKYTGVDGVLSAEGSLYNPRIF 245 Score = 60.1 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 9/101 (8%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR---VVDKSWVSRVAEVID- 74 K F + AK + GA L + G + D + + + + Sbjct: 148 KIRIF---PDPQKTLDYAKMILKAGASILAVHGRLREQKGHFTGIADWEQIQMLRKNLPS 204 Query: 75 -IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 G I +D + + + G D + +L +P + Sbjct: 205 ETVLFANGNILHAQDIDRCIKYTGVDGVLSAEGSLYNPRIF 245 >UniRef50_Q465F6 Indole-3-glycerol phosphate synthase n=3 Tax=Methanosarcina RepID=Q465F6_METBF Length = 268 Score = 69.0 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 56/236 (23%), Gaps = 42/236 (17%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 LA E GA + G + + V + +P I Sbjct: 65 FRDISPAKAAELAWEMEEAGAVAISVLTEPGVFRGSLENLDSVR---NKVCLPILRKDFI 121 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 + S D + + + L + Sbjct: 122 IDKLQLEEAQS---DLVLLIAGILG----------------------------EQLGNFV 150 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG--VRNGYDLEQLKKVREV-- 199 + + + + + K I +N + + + G E +RE Sbjct: 151 ELALKKGVEPLVEVHNRKELDLALKTDTRVIGINNRDLETLEINLGTTEELAPIIRECDL 210 Query: 200 ---CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +I+ G ++ + A D L S + + K ++ G Sbjct: 211 DHGTRHLIISESGMNSVRDVRRVIQ-AGADAVLIGSALMENASVFDKTKEFVQGAG 265 >UniRef50_C2KW54 Dihydrouridine synthase, DuS n=1 Tax=Oribacterium sinus F0268 RepID=C2KW54_9FIRM Length = 323 Score = 69.0 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 21/176 (11%), Positives = 52/176 (29%), Gaps = 3/176 (1%) Query: 73 IDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + IP + + + K + G + ++N + + +++ Sbjct: 60 VLIPQIMGNRPEFVHATMKYMESLGYQECNLNLGCPSGTVVAKGKGSGMLRIPLLLEDFF 119 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDL 190 K + + T E + EI+++ Q +G +L Sbjct: 120 QELFSLLKDSKMRVSIKTRIGLNTDGEWEELFAVFNHFPFSEIIVHPRTQKQYYSGRVNL 179 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRD-ADVDGALAASVFHKQIINIGELK 245 + + + +PL+ +G T E L ++ G + E + Sbjct: 180 HCFQNICKYSKLPLVYNGDVETREDILFLQEQFPEIQGIMCGRGLLSNPALFREAR 235 Score = 42.0 bits (97), Expect = 0.021, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 33/109 (30%), Gaps = 5/109 (4%) Query: 11 DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRV 69 D + +K G+ L + E++ + T V+ + Sbjct: 128 DSKMRVSIKTRIG--LNTDGEWEELFAVFNHFPFSEIIVHPRTQKQYYSGRVNLHCFQNI 185 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGAD--KISINSPALADPTLITRL 116 + +P G +++ ED + + I L++P L Sbjct: 186 CKYSKLPLVYNGDVETREDILFLQEQFPEIQGIMCGRGLLSNPALFREA 234 >UniRef50_B1YLS2 Indole-3-glycerol phosphate synthase n=77 Tax=Bacillales RepID=TRPC_EXIS2 Length = 258 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 67/231 (29%), Gaps = 36/231 (15%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + + D V AKRYAE GA + G + D + V + +D+P Sbjct: 57 KGDISLNV-DPVAQAKRYAESGATVISVLTDQTYFKGSMEDLAAV---TKAVDVPVLCKD 112 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 + + GA I + AL D TL Sbjct: 113 FMIDRIQIDLAKAHGASLILLIVAALDDETL---------------------------ED 145 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVR-EVC 200 + Y + + ++ ++ A + +N N D L+ ++ + Sbjct: 146 LYAYAYASGLEVLVEVHDALELKRAERLQAKILGINNRNLKKFEVSLDTS-LELLKTKSP 204 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK--QIINIGELKAYLA 249 V I+ G T+ A DG L + + E + Sbjct: 205 GVRYISESGIKTVAEAQ-MLHAAGADGILIGETLMRAENPADFIEAVNGVK 254 >UniRef50_Q72NP6 Indole-3-glycerol phosphate synthase n=4 Tax=Leptospira RepID=TRPC_LEPIC Length = 252 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 58/211 (27%), Gaps = 36/211 (17%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK Y E GA + +T + + V+ + IP I + Sbjct: 68 PVQIAKTYEELGASAISV--LTDQNYFGGS-LEDLKDVSSELKIPVLRKDFILDEIQIRE 124 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 +FGA I + L + Sbjct: 125 ARAFGASAILLIVRILTPE---------------------------QIKSFLKLASSLGM 157 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV--CHVPLIASGG 209 + + T D + GA I +N + D + +++V ++ + G Sbjct: 158 DCLVEVHTSDEAKLALDCGAEIIGINTRDLDTFQ--IHQNLVEEVSAFLPPNIVKVGESG 215 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + VD AL + F ++ Sbjct: 216 IKKRSDLDTFRKL--VDAALIGTYFMEKQDI 244 >UniRef50_A2SJ37 HisA/HisF family protein, putative n=3 Tax=Burkholderiales RepID=A2SJ37_METPP Length = 273 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 72/248 (29%), Gaps = 29/248 (11%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKRYAEEGA-DELVFYDIT 53 IIP +D+ DGQVV+ V+ D +A+R E A D L D+ Sbjct: 1 MHIIPVIDLLDGQVVRAVRGERRHYRAIASALCGSADPRIVARRLCEHCATDTLYLADLN 60 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + GR W+ + + D A L G + LA Sbjct: 61 -ALQGRPPQLEWLRTLLQ-------------DRPDLALWLDAGFSGPDDAAHLLARLEPT 106 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 + + R V E+ + Sbjct: 107 AAAR---VTPVYGSESLRSRETLAACFAPPSRALLSLDHRQGAPLDPAGVWELPAQWPRR 163 Query: 174 IVLNMMNQDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 +++ +++ G G DL+ L VR H LI +GG A L AS Sbjct: 164 LIVMTLSRVGSDGGPDLDTLAAVRARAPHAQLIGAGGVRDAADLAAAQAAG-AHAWLVAS 222 Query: 233 VFHKQIIN 240 H + Sbjct: 223 ALHDGRLP 230 >UniRef50_Q0W625 Indole-3-glycerol phosphate synthase n=2 Tax=Euryarchaeota RepID=Q0W625_UNCMA Length = 255 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 66/210 (31%), Gaps = 35/210 (16%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 +GD +AK YA GA + G + + + + +P + L Sbjct: 68 RTVGDPAEIAKEYAGAGACGVSVLTEPKYFGGSLANLQSAAGI----SVPVLRKDFLFDL 123 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + +GAD + + S + +L +A+ Sbjct: 124 SQVKESYYYGADTLLLISSFFSADSLAAMIAE---------------------------C 156 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 + + D V+ GA +N ++ ++ DL + + + +++ Sbjct: 157 RRYGMEPLVEVHDRDDVERSASAGATLYAVNNRDRHTLK--VDLRRTRDLAPAIDGTVVS 214 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + G T++ + D AL + + Sbjct: 215 ASGVSTVDQLKFVLSYS--DAALVGTALMR 242 >UniRef50_C5FBD9 tRNA-dihydrouridine synthase 1 n=1 Tax=Microsporum canis CBS 113480 RepID=C5FBD9_NANOT Length = 573 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 6/95 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IP 76 +FR E + AK GA L + G + ++ + + + Sbjct: 216 KFRILETKEKTLEYAKMILSAGASILSVHGRRREQKGHNTGVANWEYIRYLRDNLPPETV 275 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 G I + D L GAD + L+DP Sbjct: 276 IFANGNILNHGDIRDCLESTGADGVMSAEGNLSDP 310 Score = 67.4 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 49/152 (32%), Gaps = 6/152 (3%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD-AETGKYHVNQYTGDESRTRVT 155 D+ I +P + R A C D Y ++ + R T Sbjct: 163 YDRPLIVQFCANNPDELLRAARHVEGYCDAEDPDLIYKLINKLHAELSIPVTAKFRILET 222 Query: 156 QWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREV--CHVPLIASGGA 210 + +TL++ + + GA + ++ ++ + + E ++ +R+ + A+G Sbjct: 223 KEKTLEYAKMILSAGASILSVHGRRREQKGHNTGVANWEYIRYLRDNLPPETVIFANGNI 282 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + DG ++A Sbjct: 283 LNHGDIRDCLESTGADGVMSAEGNLSDPTIFS 314 >UniRef50_Q92370 N-(5'-phosphoribosyl)anthranilate isomerase n=44 Tax=cellular organisms RepID=TRPG_SCHPO Length = 759 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 29/232 (12%), Positives = 61/232 (26%), Gaps = 35/232 (15%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI-DIPFCV- 79 + + A YA+ GA + G + D + E + + P + Sbjct: 320 KGDIKLDANAAIQ-ALTYAQVGASVISVLTEPKWFKGSLNDLFVARKAVEHVANRPAILR 378 Query: 80 AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 I + GAD + + L+ L Sbjct: 379 KDFIIDPYQIMEARLNGADSVLLIVAMLSREQL--------------------------- 411 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 + +++ + + + ++ + GA I +N N DL K+ E+ Sbjct: 412 ESLYKFSKSLGMEPLVEVNCAEEMKTAIELGAKVIGVNNRNLHSF--EVDLSTTSKLAEM 469 Query: 200 CHVPLIAS--GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +I + G + + V L + + L Sbjct: 470 VPDDVILAALSGISSPADV-AHYSSQGVSAVLVGESLMRASDPAAFARELLN 520 >UniRef50_A7EMF2 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A7EMF2_SCLS1 Length = 342 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 56/172 (32%), Gaps = 7/172 (4%) Query: 78 CVAGGIKSLEDAAKI---LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 G+ S + ++ ++ + I IN + + +V Sbjct: 88 IAQFGVCSPLEISRSTTLIAPYINGIDINCGCPQSWACACSIGAALMHKRELVAEMVKEA 147 Query: 135 AETGKYHVNQYTGD---ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DL 190 K + + R +T+D+++ VQ G I ++ + + +L Sbjct: 148 KSALKREGYEGKKTVSVKIRIHRDLRDTVDFIKTVQDAGVDFITIHGRMRSTPSSHPVNL 207 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 E +K + VP +++G ++ E + V G ++A Sbjct: 208 EAIKLLNTHTTVPTVSNGDITSLRSAHEHTQQTSVSGVMSARGLLSNPALFA 259 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 37/140 (26%), Gaps = 5/140 (3%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAE 71 + VK H + D V K + G D + + S V+ + + Sbjct: 159 KKTVSVKIRI---HRDLRDTVDFIKTVQDAGVDFITIHGRMRSTPSSHPVNLEAIKLLNT 215 Query: 72 VIDIPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 +P G I SL A + + L++P L V Sbjct: 216 HTTVPTVSNGDITSLRSAHEHTQQTSVSGVMSARGLLSNPALFAGYVSTPWECVDVFLNC 275 Query: 131 TWYDAETGKYHVNQYTGDES 150 K V+ + Sbjct: 276 VVRQPIPFKLVVHHLSEMCG 295 >UniRef50_UPI0001C3129C dihydrouridine synthase DuS n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3129C Length = 333 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 43/153 (28%), Gaps = 2/153 (1%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GA+ I +N T + AE V Sbjct: 103 ETGANLIDLNMGCPVPKVCKTGAGAALVKDPDLAVEIARAAAEGSGLPVTVK-LRPGLRP 161 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGT 212 + + V G + ++ + +G D E K++ E VP++ SGG + Sbjct: 162 GDRNGIELAYRLVADAGIAGLCIHPRHASQQHSGRPDYELAKRLVEELPVPVLISGGLRS 221 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 E E F + L A ++ Sbjct: 222 AELVREVFEFTGAEAVLLARGSLGNPWLFEQVL 254 Score = 63.6 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 62/196 (31%), Gaps = 17/196 (8%) Query: 15 GQVVKGVQFRNHEIIGDIVPLA-KRYAEEGADELVFYDITASSDGRVV-DKSWVSRVAEV 72 VK + + LA + A+ G L + AS D R+ E Sbjct: 150 PVTVKLRPGLRPGD-RNGIELAYRLVADAGIAGLCIHPRHASQQHSGRPDYELAKRLVEE 208 Query: 73 IDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + +P ++GG++S E ++ GA+ + + +L +P L ++ + Sbjct: 209 LPVPVLISGGLRSAELVREVFEFTGAEAVLLARGSLGNPWLFEQVLGDRVGEP------- 261 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 + + V + ++K + + E Sbjct: 262 ------TREEILTEVDWILDRAVEHLGEGRAARYLRKFYPWYVTRLGEGAELQDRLQRTE 315 Query: 192 QLKKVREVCHVPLIAS 207 + + R +P +A+ Sbjct: 316 TVAEARAAFGIPALAA 331 >UniRef50_D1Z6W7 Whole genome shotgun sequence assembly, scaffold_7 n=1 Tax=Sordaria macrospora RepID=D1Z6W7_SORMA Length = 614 Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 51/160 (31%), Gaps = 9/160 (5%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AAK+++ D + +N + + T ++ Sbjct: 152 AAKLVAPYCDAVDLNLGCPQGIAKRGQYGSFLQEN----QELIFELINTLHKELDIPVTA 207 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVP-- 203 + R T+ TL + Q V + GA + ++ ++ + + E ++ +RE Sbjct: 208 KIRILETKEATLKYAQNVLRAGASILTVHGRRREQKGHQTGLANWEYIRYLRENLPKETV 267 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + A+G + DG ++A + Sbjct: 268 IFANGNILQYSDLEKCLEATGADGVMSAEGNLSDPGLFAK 307 Score = 64.4 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 33/107 (30%), Gaps = 11/107 (10%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR---VVDKSWV 66 LD+ K E + A+ GA L + G + + ++ Sbjct: 201 LDI--PVTAKIRI---LETKEATLKYAQNVLRAGASILTVHGRRREQKGHQTGLANWEYI 255 Query: 67 SRVAEVID--IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 + E + G I D K L GAD + L+DP Sbjct: 256 RYLRENLPKETVIFANGNILQYSDLEKCLEATGADGVMSAEGNLSDP 302 >UniRef50_C8PJN4 Indole-3-glycerol phosphate synthase n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PJN4_9PROT Length = 266 Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 69/227 (30%), Gaps = 34/227 (14%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + E + LA Y GA +T R D ++ ++ P Sbjct: 65 KGIIREDFE-PLSLAVEYENAGASAFSV--LTEPHYFRG-DLEFIPQIRRYTRTPILRKD 120 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I + L +GAD I + + AL L Sbjct: 121 FIVDRYQILEALVYGADFILLIAKALEGKQLR---------------------------E 153 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVC 200 + ++ + + D +++V GA I +N N + E+L + Sbjct: 154 LLEFARRLGLEALCEIHDKDDLKKVVFAGADIIGINHRNLETFEVDTSLSERLIPLIPNG 213 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + ++A G + E L +A VD L F +Q L+ Sbjct: 214 KI-IVAESGLHSHEQLLS-LHEAGVDAFLIGEYFMRQNDVGAALREI 258 >UniRef50_Q86L21 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q86L21_DICDI Length = 392 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 58/201 (28%), Gaps = 10/201 (4%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPALADP 110 + R + + I G E A G D + IN + Sbjct: 48 DGLARNREALIDKLGYSTQEKPIVAQFFGNKPEYFYESAKIANELGYDGVDINMGCPSRK 107 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 L + A + + + ++R + E +W+ + + Sbjct: 108 VLSPKQASGAALITNPSLAKEIVKITKEALNFEKPVSVKTRIGFDKIEIDEWIPLILESE 167 Query: 171 AGEIVLNMMNQDG---VRNGYDLEQLKKVRE-----VCHVPLIASGGAGTMEHFLEAFRD 222 + L++ + V ++ + L +V E + L+ +G T E ++ Sbjct: 168 PACLTLHLRTKKELSLVPAHWEHQVLDRVVELRNQISPNTLLVGNGDVETYEQGIDYINQ 227 Query: 223 ADVDGALAASVFHKQIINIGE 243 +DG + + + Sbjct: 228 FGIDGVMIGRAVYGNPWLFNK 248 >UniRef50_UPI000038257B COG1902: NADH:flavin oxidoreductases, Old Yellow Enzyme family n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI000038257B Length = 254 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 40/143 (27%), Gaps = 17/143 (11%) Query: 12 VRDGQVVKGV--------QFRNHEIIGDIVPLAKRYAEEGADELVFY--DITASSD---G 58 V G+ V + + + LA+ GA + ++ + G Sbjct: 105 VPAGKPVWMRVSATDWVEEGW---DLDQTLELARALKSRGAAAIHVSTGGLSPAQKIPVG 161 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLA 117 + R+ + G I A IL+ G AD IS+ L DP A Sbjct: 162 PGYQVPFAERIKAETGLTTIAVGLITEPRQAEAILAEGKADAISLARAVLYDPRWPWHAA 221 Query: 118 DRFGVQCIVVGIDTWYDAETGKY 140 G Q K Sbjct: 222 AELGAQVRAPKQYWRSQPHQYKD 244 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 42/167 (25%), Gaps = 10/167 (5%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR--V 154 AL P + + +A V Sbjct: 66 VTCCPGPVSALQPPRGPVCRQPGEPDALPLECFEAVREAVPAGKPVWMRVSATDWVEEGW 125 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMN-----QDGVRNGYDLEQLKKVREVCHVPLIASGG 209 +TL+ + ++ RGA I ++ + V GY + ++++ + IA G Sbjct: 126 DLDQTLELARALKSRGAAAIHVSTGGLSPAQKIPVGPGYQVPFAERIKAETGLTTIAVGL 185 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + D A A L Q +R Sbjct: 186 ITEPRQAEAILAEGKADAISLARAVLYDPRWPWHAAAELGAQ---VR 229 >UniRef50_A7IL67 Histidine biosynthesis protein n=2 Tax=Alphaproteobacteria RepID=A7IL67_XANP2 Length = 235 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 69/255 (27%), Gaps = 32/255 (12%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVP-LAKRYAEEGADELVFYDIT 53 ++IP +D++ G VV + + +A A L D+ Sbjct: 1 MQLIPVVDLKGGYVVHARRGERDSYRPIHTPLAATSAPLDVVAGLLALAPFRTLYVADLD 60 Query: 54 ASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + G+ + + + + V G + + G I + L D Sbjct: 61 -AIAGKGSHGAVIDGLRAAFPRLDLWVDAGEARADQVHARAAQGRGFCVIGTETLPDV-- 117 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 A + + V + +DA + V+ + TL V + Sbjct: 118 ---AAAKDVLAAGDVILSLDHDAAGPRGPVSVHEDPALWPERVIVMTLARVGSGEGPDLA 174 Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 + DG+ L A+GG E G L AS Sbjct: 175 ALERTAARADGIGRHPS--------------LYAAGGVRGPEDLDR-LAAMGTAGVLVAS 219 Query: 233 VFHKQIINIGELKAY 247 H I + + Sbjct: 220 ALHDGRIGPDTARRW 234 >UniRef50_B2UM21 Dihydrouridine synthase DuS n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM21_AKKM8 Length = 352 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 19/197 (9%), Positives = 44/197 (22%), Gaps = 5/197 (2%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADPTLITRL 116 + I + G DA ++ + +N A Sbjct: 49 SPYILRSIDENPTGRPIYGQLVGHEPEYLARDAQVLMEHACAGVDLNMGCPAPIVCRRNA 108 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + + T E + + + + Sbjct: 109 GGGMLRSLKAMDAALGALRDVLPPGAFTVKCRLG--YETPDEFERILPVIASHSPDRVCI 166 Query: 177 NMMN-QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + ++G R+ E +K + P++A+G R A G + Sbjct: 167 HARTVREGYRSPVHPEWVKWAAGMLKCPVVANGNIVDAATAEAWVRLARPAGLMIGRAAL 226 Query: 236 KQIINIGELKAYLATQG 252 + +L + Sbjct: 227 RNPWIFSQLHSRFQGHP 243 >UniRef50_Q10184 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=71 Tax=cellular organisms RepID=HIS4_SCHPO Length = 264 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 40/251 (15%), Positives = 83/251 (33%), Gaps = 25/251 (9%) Query: 8 PCLDVRDGQV---VKGVQFRNHEIIGDIVPL------AKRYAEEGADELVFYDITASSDG 58 PC+D+ GQV V G + ++ + V L A+ Y + + Sbjct: 11 PCIDIHQGQVKQIVGGTLGNDADVKTNYVSLKPSSYYAELYKLNHLEGAHVIML------ 64 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + + GGI ++ +A L GA K+ + S P L Sbjct: 65 GPNCEEAAKTALHTWPGALQIGGGI-NISNAQNWLQEGASKVIVTSWLF--PDAQFDLDR 121 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + + D + + +T +E + ++ + E +++ Sbjct: 122 LKAISSKIGKDRLVVDVSCRRKDNRWFAAINKWQVMTAFELNEENLDLLSQYCSEFLIHA 181 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTME--HFLEAFRDADVDGALAASVFHK 236 + +G+ G D + + K+ E +P +GG ++E ++ VD S Sbjct: 182 ADVEGLCKGIDEDLVIKLGEWVKIPTTYAGGGRSIEDLDLVDKLSKGKVD-LTIGSAL-- 238 Query: 237 QIINIGELKAY 247 G + + Sbjct: 239 --DIFGGVLEF 247 >UniRef50_Q5SMC7 tRNA-dihydrouridine synthase n=3 Tax=Thermus RepID=Q5SMC7_THET8 Length = 342 Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 68/203 (33%), Gaps = 13/203 (6%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSF-GADKISINSPALADPTLITRL 116 R + ++ E I +AG KSL +AA+I G D+I++N ++ Sbjct: 44 RGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGY 103 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + V E + V + T V+ + + G V+ Sbjct: 104 GACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVV 163 Query: 177 NMMNQ--------DGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDG 227 + + + + + +++ + + + +GG ++E L + VDG Sbjct: 164 HARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKR--VDG 221 Query: 228 ALAASVFHKQIINIGELKAYLAT 250 + ++ + E + Sbjct: 222 VMLGRAVYEDPFVLEEADRRVFG 244 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 41/150 (27%), Gaps = 11/150 (7%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPL-AKRYAEEGADELVFYDITASS--------DGRVVD 62 VR VK + + + AE G V + +A + + Sbjct: 125 VRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLR 184 Query: 63 KSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 WV R+ + F GGI+SLE+A L D + + DP ++ R Sbjct: 185 HDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLKR-VDGVMLGRAVYEDPFVLEEADRRVF 243 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 G Sbjct: 244 GLPRRPSRLEVARRMRAYLEEEVLKGTPPW 273 >UniRef50_D2LTR9 Indole-3-glycerol-phosphate synthase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LTR9_BACS4 Length = 263 Score = 67.8 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 57/212 (26%), Gaps = 34/212 (16%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 V +A+ Y + D + G ++ V E +P I Sbjct: 61 LVDQFSPVDIAREYDKINIDAISVLTDERFFQGHDS---YLMAVKECTSVPVLRKEFIVD 117 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + + + GAD I + + L + +A + Sbjct: 118 EKQIYESKAIGADAILLIAAILDKQQIKEYMAIAEELDL--------------------- 156 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVP 203 + + + + + I +N N LE K + + V Sbjct: 157 -----DVLMEVHDEAEIEKVLSTAKPKMIGVNNRNLKTFET--TLETTKLLAKYISDDVT 209 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 LI+ G + + + V+G L F Sbjct: 210 LISESGIKSSKDVQ-FLSNLGVNGLLVGEAFM 240 >UniRef50_B1ZW79 Indole-3-glycerol phosphate synthase n=2 Tax=Verrucomicrobia RepID=TRPC_OPITP Length = 266 Score = 67.8 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 51/220 (23%), Gaps = 34/220 (15%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDK-SWVSRVAEVIDIP-FCVAGGIKSLEDA 89 V A+RY GAD L T G + D + + P + Sbjct: 74 AVEQARRYRAAGADALSILTDTEFFGGTLADLSDVTTEFRDQRPAPPCLRKDFMVHPVQV 133 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 A+ GA I I AL D + Sbjct: 134 AQAREAGASAILIIVRALDD---------------------------AEIQALYSAAQAA 166 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA--S 207 + + ++ A I +N + + DL +++ +IA Sbjct: 167 GLDALFEVHHETELERALHHRARIIGVNNRDLAVFKT--DLALSERLIPQFPRDVIAVSE 224 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 G T L K + + Sbjct: 225 SGIFTGADARRV-HAVGAHAVLVGEALMKAPDPAALIAEF 263 >UniRef50_Q0AJQ0 Indole-3-glycerol phosphate synthase n=5 Tax=Proteobacteria RepID=Q0AJQ0_NITEC Length = 306 Score = 67.8 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 54/210 (25%), Gaps = 17/210 (8%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 +A YA GA L G + ++ + D+P + + Sbjct: 100 PTDIAASYARNGAACLSVLTDEQFFMG---NADFLRQARAACDLPVLRKDFMLDEYQVYE 156 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + GAD I + A P I+ A + + + Sbjct: 157 ARAMGADCILLIVAAFFSPIFQHD-----------SAINQGDSALERMHKLETIAQELGM 205 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA-SGGA 210 + + D + + I +N N D L+ V+ + +I G Sbjct: 206 AVLVEVHNADELDLALQLSTPLIGINNRNLKTFETTLDT-TLQLVKHIPSGRIIVTESGI 264 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIIN 240 T + L F + Sbjct: 265 RTPADVEMMLSHC-IHTFLIGETFMRAPDP 293 >UniRef50_B7GE60 Predicted protein n=11 Tax=cellular organisms RepID=B7GE60_PHATR Length = 279 Score = 67.4 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 79/282 (28%), Gaps = 43/282 (15%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEII-------------------------GDIV-PLAK 37 + PC+D+ GQ VK + A+ Sbjct: 1 MKFRPCIDLHHGQ-VKQIVGSTLRFTSPTTDHDDDTVTASSVPELATNFATERPAREFAE 59 Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA 97 RYA +G + + V GG+ +A + L GA Sbjct: 60 RYARDGLTGGHVILL------GPGNADAARAALRAAPGTLQVGGGVHDA-NAREWLDAGA 112 Query: 98 DKISINSPALADPTLITRLAD---RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 + + S ++ + + + + +V + + Y Sbjct: 113 SHVIVTSHVFSNGQIAMDRLERLVQLIGKERLVLDLSCRKRPDDHNNGPYYVVTNQWQVF 172 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTME 214 T++ E +++ ++ +G++ G + + + VP+ +GG +++ Sbjct: 173 TEYAVTTESLRTLAAYCDEFLVHGVDVEGLQCGILDDLVTLLATSP-VPVTYAGGVRSID 231 Query: 215 HFLEA--FRDADVDGALAASVF--HKQIINIGELKAYLATQG 252 VD S + ++ A+ + Sbjct: 232 DLNRVEQLGQGKVD-CTVGSALDIFGGSLPYADVVAWHHQRN 272 >UniRef50_C0W0L6 Indole-3-glycerol-phosphate synthase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0L6_9ACTO Length = 290 Score = 67.4 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 69/245 (28%), Gaps = 44/245 (17%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 +N + D +A Y GA + G D + RV + +DIP I Sbjct: 65 KNLHPLTDPGRVAVEYENGGASIISCVTEKNFFGGSNAD---LCRVRKCVDIPVLQTDFI 121 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 S + GAD + + L + Sbjct: 122 ISPYQILEARVNGADMVLLTVGLLN---------------------------QAQLESFI 154 Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP 203 + T T + + E+ + GA I +N N D ++ ++ ++ Sbjct: 155 ERTESLGMTALVEVESRLELLTALDAGAKVIGVNARN--LQTQELDCYKMAEIFDIVPAE 212 Query: 204 L--IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA---------YLATQG 252 + +A+ G + +E D + + ++ L + Sbjct: 213 VTAVAAAGVQGPKEIIEY-AKMGADAIMVGEALLRSPNITARMQELVVTGQHPALLTDRK 271 Query: 253 VEIRI 257 +++ Sbjct: 272 ERVKM 276 >UniRef50_C6WWE3 Histidine biosynthesis protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WWE3_METML Length = 254 Score = 67.4 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 76/253 (30%), Gaps = 31/253 (12%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEI----------IGDIVPLAKRYAEEGADELVFYDIT 53 +IIP +D+ +G VV + H + +A A +L D+ Sbjct: 1 MQIIPVIDLLNGIVVHAKKGERHRYQAITSALTPSSEPLAIVAALLALHPFQQLYIADLN 60 Query: 54 ASSD-------GRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSP 105 A + + ++ +A+ + V GI +L + S Sbjct: 61 AIQKLGNTQDCTQSNNFDVIASIAQHYPNLTLWVDAGISNLTELDLWSQLNLSSQPDLSS 120 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 + + + +++ T T ++ + E Sbjct: 121 -----------QAGVKLILGSENFVSMEQYLAIYHVISEQTILSLDFMPTGYQGPQALLE 169 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDAD 224 +++ + G G +L+ L + + L A+GG + + Sbjct: 170 STAYWPQAVIIMSLAHVGANQGVNLQLLTQTQAKAGDFNLYAAGGVRDIADLNT-LKSLG 228 Query: 225 VDGALAASVFHKQ 237 + GAL A+ H + Sbjct: 229 IHGALIATAIHSK 241 >UniRef50_Q04VP3 TRNA-dihydrouridine synthase n=4 Tax=Leptospira RepID=Q04VP3_LEPBJ Length = 339 Score = 67.4 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 20/208 (9%), Positives = 57/208 (27%), Gaps = 14/208 (6%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSPALADPTLITRL 116 + ++S E + + + G E + +G +I++N +D Sbjct: 52 HGDRRRFLSYSPEELPLAIQLGGDNPKALAESSKIGEDYGYSEINLNVGCPSDRVREGNF 111 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 V V + T + +++ V++ G ++ Sbjct: 112 GACLMETPERVAELVCAMDGNVSIPVTVKCRIGISGKETLEDLCRFIECVRQAGVRRFIV 171 Query: 177 NMMNQDGVRNGYD---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + ++ ++ E + + +GG T+ + + D Sbjct: 172 HARIAILGGLSPAQNRQIPPLRYAHVESLKKEFPDLLIEINGGIRTLAEMQDRLKTN--D 229 Query: 227 GALAASVFHKQIINIGELKAYLATQGVE 254 G + ++ E+ + Sbjct: 230 GVMIGRAAYETPYLFSEVDSLFFHDNSP 257 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 54/195 (27%), Gaps = 15/195 (7%) Query: 15 GQVVKGVQFR-NHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKS 64 VK E + D+ + + G + + A G + + Sbjct: 136 PVTVKCRIGISGKETLEDLCRFIECVRQAGVRRFIVHARIAILGGLSPAQNRQIPPLRYA 195 Query: 65 WVSRVAEVIDIPFC-VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 V + + + GGI++L + L D + I A P L + + F Sbjct: 196 HVESLKKEFPDLLIEINGGIRTLAEMQDRLKT-NDGVMIGRAAYETPYLFSEVDSLFFHD 254 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV--LNMMNQ 181 Y +++ + + +K GA + Sbjct: 255 NSPSLSRREVLLRMRDYIEEVVLKEKNGKPHHALRHMLGLFHGEK-GARSFRRVVTERMY 313 Query: 182 DGVRNGYDLEQLKKV 196 + L+ ++++ Sbjct: 314 YDYSSDLLLDAIQEI 328 >UniRef50_B0CNE7 Predicted protein n=3 Tax=Agaricales RepID=B0CNE7_LACBS Length = 308 Score = 67.4 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 22/202 (10%), Positives = 54/202 (26%), Gaps = 10/202 (4%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 IT V ++ + I + + AAK++ I +N Sbjct: 74 VDPITGVISYNGVSRAIFATHPVEKPYLIYQIGSSDPELAVQAAKMVMQDVSGIDLNCGC 133 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + + ++ + R +Q +TL V+ + Sbjct: 134 PKPFSTHAGMGAALLTNPDLLCSILTALRREMPPEITVTAK--IRLLPSQEDTLKLVERI 191 Query: 167 QKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVC-----HVPLIASGGAGTMEHFLEAF 220 G + ++ ++ +E+L+++ E + +I +G + E Sbjct: 192 VNTGISALTVHCRTRNMREKDRAVIERLREIVEFVEGLGRGIAVIENGDCMSWEDAKRVR 251 Query: 221 RDADVDGALAASVFHKQIINIG 242 + A Sbjct: 252 ETTGAHSVMIARGAEANPSCFS 273 Score = 47.8 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 14/104 (13%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVI----- 73 K D + L +R G L + T + R D++ + R+ E++ Sbjct: 174 KIRL---LPSQEDTLKLVERIVNTGISALTVHCRTRNM--REKDRAVIERLREIVEFVEG 228 Query: 74 ---DIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLI 113 I G S EDA ++ GA + I A A+P+ Sbjct: 229 LGRGIAVIENGDCMSWEDAKRVRETTGAHSVMIARGAEANPSCF 272 >UniRef50_A4RM51 Putative uncharacterized protein n=2 Tax=Saccharomyceta RepID=A4RM51_MAGGR Length = 614 Score = 67.4 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 55/211 (26%), Gaps = 24/211 (11%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 T DG + + + FC +L +AAK ++ D + +N Sbjct: 107 TPWLDGNPA-------IDRPLFVQFCAN-DPSALLEAAKHVAPYCDAVDLNLGCPQGIAR 158 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 ++ + R T TL + + V GA Sbjct: 159 KGHYGAFLQED----QELIHKLIRQLHDGLSIPVTAKIRILDTPEATLAYARNVLDAGAS 214 Query: 173 EIVLNMMNQDGVR---NGYDLEQLKKVREV--CHVPLIASGGAGTMEHFLEAFRDADVDG 227 + ++ ++ D ++ +RE + A+G D Sbjct: 215 ILTVHGRRREQKGHLTGVADWSAIRHLRENLPPETVIFANGNILQRGDLERCLEATGADA 274 Query: 228 ALAASVFHKQIINI-------GELKAYLATQ 251 ++A E + Y + Sbjct: 275 VMSAEGNLSDPTLFAPEPPVGEEGREYWRGK 305 Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 13/109 (11%) Query: 12 VRDGQVV----KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKS 64 + DG + K + + A+ + GA L + G + D S Sbjct: 180 LHDGLSIPVTAKIRI---LDTPEATLAYARNVLDAGASILTVHGRRREQKGHLTGVADWS 236 Query: 65 WVSRVAEVID--IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 + + E + G I D + L GAD + L+DP Sbjct: 237 AIRHLRENLPPETVIFANGNILQRGDLERCLEATGADAVMSAEGNLSDP 285 >UniRef50_C6CUD5 Indole-3-glycerol-phosphate synthase n=3 Tax=Bacteria RepID=C6CUD5_PAESJ Length = 265 Score = 67.4 bits (163), Expect = 5e-10, Method: Composition-based stats. Identities = 28/224 (12%), Positives = 59/224 (26%), Gaps = 32/224 (14%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 LA Y GAD L +T + + +++ + E + P I Sbjct: 68 RPDFHPAELAAAYERAGADCLSV--LTDRDYFQGSN-EYLTLIKETVSNPLLRKDFIIDY 124 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + GAD + + + L + Sbjct: 125 RQVYEARVIGADAVLLIAAILTS--------------------------SELSELYDTAK 158 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLI 205 V + + + ++ A I +N + + E L + V +I Sbjct: 159 SLGMDVLVEVHDREELERVLELDKATLIGVNNRDLKSFVTDLHTTEALIDLIPK-GVTVI 217 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + G + ++ + G L F +Q + + Sbjct: 218 SESGIAGRKD-MDYLQTVGAQGVLIGEHFMRQPDAGQAVIDLMG 260 >UniRef50_Q8CWK7 tRNA-dihydrouridine synthase A n=32 Tax=Gammaproteobacteria RepID=DUSA_VIBVU Length = 326 Score = 67.1 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 68/216 (31%), Gaps = 18/216 (8%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAK-ILSFGADKISINSPALADPT 111 A G+ +++ E + + G + L AK G D++++N +D Sbjct: 42 AIIHGKG---DFLAYNQEEHPVALQLGGSNPQDLATCAKLAAERGYDEVNLNVGCPSDRV 98 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV-QKRG 170 R + +V E V T + + D+V V +K G Sbjct: 99 QNGRFGACLMAEPQLVADCVAAMKEVVDIPVTVKTRIGIDDQDSYEFLTDFVSIVSEKGG 158 Query: 171 AGEIVLNMMNQDGVRNGY---------DLEQLKKVREVCHVPLIA-SGGAGTMEHFLEAF 220 + ++ D + ++++ IA +GG ++E E Sbjct: 159 CEQFTIHARKAWLSGLSPKENREIPPLDYPRAYQLKKDFSHLTIAINGGVKSLEEAKEHL 218 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + DG + ++ + + L I+ Sbjct: 219 QHL--DGVMIGREAYQSPYLLASVDQELFGSQSPIK 252 Score = 44.7 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 59/205 (28%), Gaps = 19/205 (9%) Query: 9 CLDVRDGQVVKGVQFRNHEIIGDIV-PLAKRY-AEEGADELVFYDITASSDG-------- 58 +D+ VK + + + + + G ++ + A G Sbjct: 124 VVDI--PVTVKTRIGIDDQDSYEFLTDFVSIVSEKGGCEQFTIHARKAWLSGLSPKENRE 181 Query: 59 -RVVDKSWVSRVAEVIDIPFCV-AGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +D ++ + GG+KSLE+A + L D + I A P L+ + Sbjct: 182 IPPLDYPRAYQLKKDFSHLTIAINGGVKSLEEAKEHLQH-LDGVMIGREAYQSPYLLASV 240 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + + + + GA + Sbjct: 241 DQELFGS---QSPIKKRRQIVEEMYPYIEQQLANGAYLGHMTRHMLGLFQNMPGARQWRR 297 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCH 201 + ++++ + G +E L++ Sbjct: 298 H-ISENAHKPGSGIEVLQQALAKIP 321 >UniRef50_C2D6F0 Indole-3-glycerol-phosphate synthase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6F0_9ACTN Length = 282 Score = 67.1 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 60/207 (28%), Gaps = 35/207 (16%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 +A+ Y GAD + G +++ V +P I + Sbjct: 87 IAQDYEVAGADAISVLTEHTRFLGSE---DYLADVVRAQTLPVLRKDFIIDDYMIYEAKV 143 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 GA + + L + TL LA + + + Sbjct: 144 LGASAVLLICALLDEKTLANYLALCHSL---------------------------GLSAL 176 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASGGAGT 212 + T D +++ GA I +N N D + ++ + V L++ G Sbjct: 177 VEAHTRDEIKQACLAGAKIIGINNRNLHDF--SVDTQCTSQLAQAVPDGVLLVSESGITQ 234 Query: 213 MEHFLEAFRDADVDGALAASVFHKQII 239 + +AF D D L + Sbjct: 235 AQDVRQAF-DTQADAVLIGEALMRAKD 260 >UniRef50_UPI00006DC778 hypothetical protein CdifQ_04001754 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DC778 Length = 164 Score = 67.1 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 53/109 (48%), Positives = 72/109 (66%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI 75 + KG +F++ + L K Y++ GADELVFYDITAS++ R +V++VAE I+I Sbjct: 8 KSCKGKKFKDIVDVDSPEVLGKFYSDCGADELVFYDITASNEERKTSLEFVTKVAENINI 67 Query: 76 PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 PFCV GG+ LED IL GADK+SINS A+ +P LI + +FG QC Sbjct: 68 PFCVGGGVNKLEDFTDILRKGADKVSINSSAVKNPELIREASLKFGAQC 116 Score = 60.1 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 33/109 (30%), Gaps = 1/109 (0%) Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 + G + + V + GA E+V + LE + K Sbjct: 1 MSRCEKWKSCKGKKFKDIVDVDSPEVLGKFYSDCGADELVFYDITASNEERKTSLEFVTK 60 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 V E ++P GG +E F + R D S K I E Sbjct: 61 VAENINIPFCVGGGVNKLEDFTDILRK-GADKVSINSSAVKNPELIREA 108 >UniRef50_A4SG41 Indole-3-glycerol phosphate synthase n=2 Tax=Bacteria RepID=TRPC_PROVI Length = 258 Score = 67.1 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 54/206 (26%), Gaps = 35/206 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A Y GA L G ++ +VA + +P I Sbjct: 72 DPVRIALAYEALGASALSVLTDRHFFQGSAG---YLQQVAAAVSLPVLRKDFIIDELQIF 128 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD I + AL + + Q G+ Sbjct: 129 ESRIMGADAILLIVAAL---------------------------EPSELHDYLQMAGEIG 161 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA--SG 208 + + + + GA + +N N +R +IA Sbjct: 162 LDVLVEVHDRHELALAIESGAEVVGVNNRNLKDFSVDPATS--ASLRPYFPSGVIAVSES 219 Query: 209 GAGTMEHFLEAFRDADVDGALAASVF 234 G T + RDA D L Sbjct: 220 GLKTADDI-ALVRDAGFDAVLIGEGL 244 >UniRef50_Q0B005 Indole-3-glycerol phosphate synthase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B005_SYNWW Length = 260 Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 22/218 (10%), Positives = 48/218 (22%), Gaps = 33/218 (15%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + +A+ Y GA + DGR ++ V + +P I + Sbjct: 67 PLEMARSYEANGAAVISVITEQEFFDGRK---EYLPLVKTGVKLPVLRKDFIIDEVQIYE 123 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 G ++ + + + Sbjct: 124 SRQMG---------------------------ADLLLLIAALHDYDSLLALVEKCSALGM 156 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGGA 210 + + + ++ I +N N L + + L ++ G Sbjct: 157 EPLLETHGREEIKMALDLPVKIIGINNRNLRDFSVDI-RSSLDLLPLIPDSYLKVSESGI 215 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 A D L +L+ L Sbjct: 216 KEASDL-RLLESAGCDFVLVGEALVTAADPGAKLREIL 252 >UniRef50_Q7RX85 Putative uncharacterized protein n=1 Tax=Neurospora crassa RepID=Q7RX85_NEUCR Length = 576 Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 55/175 (31%), Gaps = 16/175 (9%) Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 AAK+++ D + +N + + T ++ Sbjct: 99 AAKLVAPYCDAVDLNLGCPQGIAKRGQYGSFLQEN----QELIFELINTLHKELDIPVTA 154 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCHVP-- 203 + R T+ TL + Q V + GA + ++ ++ + D E ++ +RE Sbjct: 155 KIRILDTKEATLKYAQNVLRAGASILTVHGRRREQKGHQTGLADWEYIRYLRENLPKETV 214 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI-------GELKAYLATQ 251 + A+G + DG ++A E + Y ++ Sbjct: 215 IFANGNILQHADLEKCLAATGADGVMSAEGNLSDPGLFARPPAVGEEGREYWRSK 269 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 11/107 (10%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR---VVDKSWV 66 LD+ K + + A+ GA L + G + D ++ Sbjct: 148 LDI--PVTAKIRI---LDTKEATLKYAQNVLRAGASILTVHGRRREQKGHQTGLADWEYI 202 Query: 67 SRVAEVID--IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 + E + G I D K L+ GAD + L+DP Sbjct: 203 RYLRENLPKETVIFANGNILQHADLEKCLAATGADGVMSAEGNLSDP 249 >UniRef50_B8BQ55 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQ55_THAPS Length = 451 Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 10/93 (10%) Query: 164 QEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHV-------PLIASGGAGTM 213 Q + G I ++ + + D +++ + V PLIA+GG T Sbjct: 201 QRLIDCGVDLITVHGRTRFENKVAVGKADWNSIERCVQTARVYSGNAQYPLIANGGIETY 260 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + G +++ + L Sbjct: 261 NDVEKCLEQTQASGVMSSESLLENPGLFSNLSE 293 Score = 55.9 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 38/119 (31%), Gaps = 11/119 (9%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWVSRVAEVIDI-------PFCVAG 81 +R + G D + + T + D + + R + + P G Sbjct: 196 PEERIQRLIDCGVDLITVHGRTRFENKVAVGKADWNSIERCVQTARVYSGNAQYPLIANG 255 Query: 82 GIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 GI++ D K L A + + L +P L + L++ + G+ Sbjct: 256 GIETYNDVEKCLEQTQASGVMSSESLLENPGLFSNLSEETACDTVARGMLERQLGYACM 314 >UniRef50_P00937 Indole-3-glycerol phosphate synthase n=12 Tax=Dikarya RepID=TRPG_YEAST Length = 484 Score = 66.7 bits (161), Expect = 6e-10, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 66/225 (29%), Gaps = 37/225 (16%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIP-----FCVAGGIKSL 86 A +YAE GA + G + D V ++ ++ P I S Sbjct: 290 AAEQALKYAEAGASAISVLTEPHWFHGSLQDLVNVRKILDLKFPPKERPCVLRKEFIFSK 349 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + GAD + + L+ P L + Y+ Sbjct: 350 YQILEARLAGADTVLLIVKMLSQPLL---------------------------KELYSYS 382 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPL 204 D + + + + + +Q + GA + +N + DL + E V L Sbjct: 383 KDLNMEPLVEVNSKEELQRALEIGAKVVGVNNRDLHSFN--VDLNTTSNLVESIPKDVLL 440 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 IA G T + + ++ V G L K + Sbjct: 441 IALSGITTRDDAEKYKKE-GVHGFLVGEALMKSTDVKKFIHELCE 484 >UniRef50_A8PRW0 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PRW0_MALGO Length = 576 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 94/279 (33%), Gaps = 45/279 (16%) Query: 16 QVVKGVQFRNHEIIGDI-------VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSR 68 V D + +A Y GAD++ G + Sbjct: 305 IFVPLTVGGGIRDFTDPDGTFHPALEVAHAYFRAGADKVSI--------GSEAVYAVEQL 356 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKI---LSFGADKI---------------------SINS 104 + ++ C + A + + A K S Sbjct: 357 LQRATELGDCTGDPCAAPAMALRGDTGIEQIAHKYGVQAVVVSVDPKRVYLSDQEIDGLS 416 Query: 105 PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 + IV G D + + + + + Sbjct: 417 DEHSSGDGPVDARTHPHASSIVCGQDERPETAGQSARWWYMCTVKGGRESRDIDVVQLAR 476 Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD-- 222 V++ GAGE+++N +++DG G+D + + VR ++P+IAS GAG +HF + Sbjct: 477 GVERLGAGELLINSIDRDGSYAGFDEKLIDLVRGCVNIPVIASSGAGCADHFCDVLASRP 536 Query: 223 ----ADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 A ++ ALAA +FH++ ++I ++K A G +R+ Sbjct: 537 AARGAPIEAALAAGIFHRREVSIMDVKKRCADAGYPVRM 575 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 53/142 (37%), Gaps = 44/142 (30%) Query: 1 MLAKRIIPCLDVR---DGQVV-------------------------KGVQFRNH--EIIG 30 M +RI+ CLDVR DG +V +G Sbjct: 200 MPTRRIVACLDVRSNDDGDLVVTKGESYNVRERQPAEGQAKSTADGTIRSGGKAQVRNMG 259 Query: 31 DIVPLAKRYAEEGADELVFYDITASSD---GRVVDKSWVSRVAEVIDIPFCVAGGIKSL- 86 V LA+RY EEGADE+ F +IT+ + G S ++ A I +P V GGI+ Sbjct: 260 KPVELAQRYYEEGADEIAFLNITSFRNWALGDQPMLSLLNVAAATIFVPLTVGGGIRDFT 319 Query: 87 ----------EDAAKILSFGAD 98 E A GAD Sbjct: 320 DPDGTFHPALEVAHAYFRAGAD 341 >UniRef50_C0ZCE3 Indole-3-glycerol phosphate synthase n=2 Tax=Bacillales RepID=C0ZCE3_BREBN Length = 266 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 60/222 (27%), Gaps = 34/222 (15%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V +AK Y A+ L + G S++ ++ EV+D P + + Sbjct: 71 AVTIAKAYQAAQAECLSVLTDESFFQGS---LSYLRQIHEVVDRPLLRKDFLLDEIQVVE 127 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + GAD + + + L TL Sbjct: 128 ARAAGADCVLLIAAILDRETLRH--------------------------LNQTAEELGMD 161 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREVCHVPLIASGG 209 + + + Q + +N N + + E + ++ + +++ G Sbjct: 162 VLIEVHDKRECELVFQAMEPKLLGINNRNLNTFQTDLAVTHELIAELPA--SLTIVSESG 219 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 T + A L F +Q + + Sbjct: 220 ISTPADIENV-QSAGARAVLVGEHFMRQTDVERAVIDLVGEA 260 >UniRef50_B6KUE9 Dihydrouridine synthase domain-containing protein n=4 Tax=Eukaryota RepID=B6KUE9_TOXGO Length = 653 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 7/103 (6%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSR 68 LD+ K + I + A+ G + + + T Sbjct: 391 LDI--PVTCKIRL---LDTIHKTIDFARLCENCGIEAIAIHARETHERPSHRAHWDLFPA 445 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 + + IP G + DA GAD + A+ DP Sbjct: 446 LKSSLAIPLIANGDFLTRRDADVFQEKIGADSLMFARGAMWDP 488 Score = 66.3 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 1/96 (1%) Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQLKKVREVCHVPLIA 206 + R T +T+D+ + + G I ++ + + + ++ +PLIA Sbjct: 397 CKIRLLDTIHKTIDFARLCENCGIEAIAIHARETHERPSHRAHWDLFPALKSSLAIPLIA 456 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +G T D + A Sbjct: 457 NGDFLTRRDADVFQEKIGADSLMFARGAMWDPSIFS 492 >UniRef50_Q9UTH9 tRNA-dihydrouridine synthase 3 n=1 Tax=Schizosaccharomyces pombe RepID=DUS3_SCHPO Length = 617 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 23/264 (8%), Positives = 58/264 (21%), Gaps = 43/264 (16%) Query: 24 RNHEIIGDIVPLA------KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDI 75 I + + GAD G + + V + ++ Sbjct: 237 WRDRKILAPLTTVGNPPFRRLCGSLGADTFYSEMAMCYPLMQGHQPEWALVRGLNYEREM 296 Query: 76 PFCVAGGI--------------KSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 GI K+ + A+ G D + +N D Sbjct: 297 MRGGRRGILGVQLATGKLWQATKTAQVIAEQCD-GVDFLDLNCGCPIDLVFRQGAGSSLL 355 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + + + + L+ ++ Sbjct: 356 ENPGRLLRNLQGMDAVSGQIPVTVKLRMGNKDDHPVVKNLIGRIFNETNTSAATLHGRSR 415 Query: 182 DGVRNG-YDLEQLKKVREVCH------------------VPLIASGGAGTMEHFLEAFRD 222 + + + + ++ + LI +G + + + + Sbjct: 416 QQRYSKNANWDYIGEIASKVKSMNERIDELPEDSLRTQPLSLIGNGDCYSWQDWYDGVNK 475 Query: 223 ADVDGALAASVFHKQIINIGELKA 246 VD + A + E++A Sbjct: 476 -GVDTVMIARGALVKPWIFEEIEA 498 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 15/184 (8%), Positives = 41/184 (22%), Gaps = 25/184 (13%) Query: 15 GQVVKGVQFRNHEIIGDIVP---LAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVA 70 VK V + + + E + + + + ++ +A Sbjct: 376 PVTVKLRMGNKD---DHPVVKNLIGRIFNETNTSAATLHGRSRQQRYSKNANWDYIGEIA 432 Query: 71 EVI------------------DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + + G S +D ++ G D + I AL P + Sbjct: 433 SKVKSMNERIDELPEDSLRTQPLSLIGNGDCYSWQDWYDGVNKGVDTVMIARGALVKPWI 492 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 + R + + + + ++ + Sbjct: 493 FEEIEARQFIDKSSTQRLEMLEQYCNNGLEYWGSDSQGVNTTRRFFLEFMSFFHRYTPIA 552 Query: 173 EIVL 176 + Sbjct: 553 LYEV 556 >UniRef50_UPI0000E479FB PREDICTED: similar to MGC108441 protein n=9 Tax=Strongylocentrotus purpuratus RepID=UPI0000E479FB Length = 497 Score = 66.7 bits (161), Expect = 7e-10, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 57/239 (23%), Gaps = 35/239 (14%) Query: 32 IVPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVID---IPFCVAGGIKSL 86 A A G D ++ + + ++ V E + + + GG+++ Sbjct: 237 TAESASDAANAGVDGILVSAHGG-RQLESSPAPIDALAEVVEAVHGRGVEIYMDGGVRTG 295 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI----------------- 129 D K L GA + + P L + + Sbjct: 296 TDVFKALGRGARAVFLGRPILWGLACQNNIPCFSFCIQSMPVYEADIPSARAAKQESIKN 355 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ-------EVQKRGAGEIVLNMMNQD 182 Y E + +VT + + G I+++ Sbjct: 356 HFEYLREMQYNPKATWEYIRWIKKVTSLPVVCKGILTAESASDAANAGVDGILVSAHGGR 415 Query: 183 GVRNGYDL-EQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + + L +V E V + GG T +A Sbjct: 416 QQESSPAPIDALAEVVEAVHGRGVEVYMDGGVRTGTDVFKALGR-GARAVFLGRPILWG 473 Score = 42.0 bits (97), Expect = 0.022, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 31/106 (29%), Gaps = 6/106 (5%) Query: 32 IVPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVID---IPFCVAGGIKSL 86 A A G D ++ + + ++ V E + + + GG+++ Sbjct: 392 TAESASDAANAGVDGILVSAHGG-RQQESSPAPIDALAEVVEAVHGRGVEVYMDGGVRTG 450 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 D K L GA + + P L + T Sbjct: 451 TDVFKALGRGARAVFLGRPILWGLACQVVYPRTTSHLELWFMNHTI 496 >UniRef50_B9KXB9 Indole-3-glycerol phosphate synthase n=4 Tax=Bacteria RepID=B9KXB9_THERP Length = 275 Score = 66.7 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 59/221 (26%), Gaps = 34/221 (15%) Query: 39 YAEEGADELVFYDITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLEDAAKILSFG 96 Y GA L G + D + V+R+A +P + + + G Sbjct: 82 YLAGGAAALSVLTDEPFFHGSLKDLAVVARLAHASPGPVPVLRKDFLLDPYQIVEARAHG 141 Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 AD + + L L + T + + + Sbjct: 142 ADAVLLIVAVLDRWQL---------------------------AELLGVTWELGMEALVE 174 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVPLIASGGAGTMEH 215 + + GA I +N + E+L + V ++A G ++ Sbjct: 175 VHDESELATAVEAGARVIGINNRDLRTFTVDLTVSERLAPLVPADRV-VVAESGIHSVAD 233 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 A +D L + L + V +R Sbjct: 234 VER-LARAGIDAILVGEALMMAPDR-RAIVQALGSVEV-VR 271 >UniRef50_C6C1D4 Indole-3-glycerol-phosphate synthase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1D4_DESAD Length = 259 Score = 66.7 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 64/223 (28%), Gaps = 33/223 (14%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 +AK YA GA + G + S++ + +P + L + Sbjct: 69 AADVAKMYAAGGASAISVLTEEEYFKG---NLSYLDEIKPS-GLPMLRKDFLTDLMQIEQ 124 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 L+ A + + D + + ++ Sbjct: 125 TLATPASALLVIVRMFEDDGYLKEMIEQTHA--------------------------AGL 158 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVCHVPLIASGGA 210 V + ++ ++ GA I +N + D + + K++E + I + G Sbjct: 159 DAVVEAFDDVDLKRAKQAGARIIQINNRDLDTLGIDMNRSIEFIKLKEEGEI-WICASGI 217 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 E + + D L + +L A +A + Sbjct: 218 SEPEDCAQM-NELGYDTVLIGTSIMSSPDPQAKLAALVAGGRL 259 >UniRef50_B7G5S1 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5S1_PHATR Length = 229 Score = 66.7 bits (161), Expect = 8e-10, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 11/154 (7%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 D I +N + + I A + + R Sbjct: 78 CDAIDLNLGCPQRTAYLGHFGSYLLDRKDRSLICDIVRAGAAAVSIPIFVK--IRLLDKV 135 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGVR--------NGYDLEQLKKVREV-CHVPLIAS 207 ET++ Q++++ GA I ++ + L+Q+ +++ +P+IA+ Sbjct: 136 EETIELCQQLERAGASLIAVHARYRASWERKGAGARDGPALLDQIAVLKQHITSIPIIAN 195 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G T + + DG ++A Sbjct: 196 GNVITYDDVEKNLELTGADGVMSAEGILDNPALF 229 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 13/106 (12%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS--------DGRVVDKSWV 66 VK + + + + L ++ GA + + +S + Sbjct: 124 PIFVKIRL---LDKVEETIELCQQLERAGASLIAVHARYRASWERKGAGARDGPALLDQI 180 Query: 67 SRVAEV-IDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 + + + IP G + + +D K L GAD + L +P Sbjct: 181 AVLKQHITSIPIIANGNVITYDDVEKNLELTGADGVMSAEGILDNP 226 >UniRef50_C7P1Q4 Indole-3-glycerol-phosphate synthase n=5 Tax=Halobacteriaceae RepID=C7P1Q4_HALMD Length = 267 Score = 66.3 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 62/217 (28%), Gaps = 35/217 (16%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 D V LA++ E GA L G + R+ E +D+P + E Sbjct: 66 TEDPVALAEQMVEGGAAALSVLTEPEHFGGSAATLA---RIREAVDVPVLRKDFVLHEEQ 122 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + AD I + L +P + + Sbjct: 123 LDVVE---ADVILLIVRFLDEPGTGDLA------------------------DLLSAARE 155 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIA 206 + + T D + + GA + +N + + DL+ ++V V L+A Sbjct: 156 RGFQVLVETHTADELARAVEAGAEIVGVNNRDLA--KLAVDLDTFERVAPDAPEGVTLVA 213 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 G + R A D L S E Sbjct: 214 ESGIQSPADVARM-RRAGADALLVGSAIMDHGAPAEE 249 >UniRef50_Q5V138 Indole-3-glycerol phosphate synthase n=7 Tax=Halobacteriaceae RepID=TRPC_HALMA Length = 271 Score = 66.3 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 60/213 (28%), Gaps = 35/213 (16%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 + E D V LA++ E GA L G RV E +D+P I Sbjct: 62 DGERADDPVDLAQQMVEGGAAALSVLTEPDHFGGSTATLE---RVREAVDVPVLRKDFIL 118 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 E+ ++ +++ D + Sbjct: 119 H-ENQLDVVEADV--------------------------ILLIVRFLEADGTDDLADLLT 151 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HV 202 + + + T V++ GA I +N + DL + V V Sbjct: 152 AARERGFQVLVETHTAAEVEKALDAGADIIGVNNRD--LGELAVDLGTFEAVAPDIPEDV 209 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 LIA G T + RDA D L S Sbjct: 210 TLIAESGIQTADDVTRM-RDAGADALLIGSAIM 241 >UniRef50_Q4PIC3 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PIC3_USTMA Length = 364 Score = 66.3 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 22/201 (10%), Positives = 52/201 (25%), Gaps = 19/201 (9%) Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + ++ L +AA+ ++ AD I +N + + Sbjct: 85 SAPQVVQLAGNNVQQLVEAARRVAPYADAIDLNLGCPQRHAEQGHYGACLLPKQNWPLVA 144 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM---NQDGVRNG 187 V T R V + +T + G+ + ++ + + Sbjct: 145 EIVSGMVQAVDVPITTK--IRLPVPKEQTAQLAVMLAHAGSSLVTVHPRFASSARRRKGL 202 Query: 188 YDLEQLKKVREVC--------------HVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 DL+Q+ KVRE ++++G + + G + Sbjct: 203 ADLDQVVKVREALQAQGLLRSAEQPHKDTAVVSNGNVQCWQDVVNNLELTGASGVMVGET 262 Query: 234 FHKQIINIGELKAYLATQGVE 254 + + Sbjct: 263 LLQNPALFRPALRDCEHARLP 283 >UniRef50_B8HFM3 TIM-barrel protein, nifR3 family n=4 Tax=Actinomycetales RepID=B8HFM3_ARTCA Length = 392 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVI 73 +K + + + + + + + G + + TA+ D S ++R+ E + Sbjct: 155 PLTIKMRKGIDDDHLT-YLDAGRIARDSGVAAVALHGRTAAQFYSGQADWSAIARLREAL 213 Query: 74 D-IPFCVAGGIKSLEDAAKILS 94 IP G I S EDA +++ Sbjct: 214 PDIPVLGNGDIWSAEDAVRMVR 235 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 71/229 (31%), Gaps = 12/229 (5%) Query: 37 KRYAEEGADELVFYDITASSDGRVVDKSWVSRVA----EVIDIPFCVAGGIKSLEDAAKI 92 + E G + ++ S + ++ E + ++ A ++ Sbjct: 43 RLCREYG-GGMYVAEMVTSRALVERTPESLRIISHDDDEKVRSVQLYGVDAGTVGAAVRM 101 Query: 93 L--SFGADKISINSPALADPTLITRLADRFGVQCI-VVGIDTWYDAETGKYHVNQYTGDE 149 L AD I +N + I E K ++ Sbjct: 102 LVEEDRADHIDLNFGCPVPKVTRRGGGSALPWKIDLFTAIVQTAVREASKGNIPLTIKMR 161 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV-CHVPLIAS 207 LD + + G + L+ +G D + ++RE +P++ + Sbjct: 162 KGIDDDHLTYLDAGRIARDSGVAAVALHGRTAAQFYSGQADWSAIARLREALPDIPVLGN 221 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 G + E + R+ VDG + + G+L+A +G ++R Sbjct: 222 GDIWSAEDAVRMVRETGVDGVVVGRGCQGRPWLFGDLQAAF--EGSDVR 268 >UniRef50_C4IG30 Indole-3-glycerol phosphate synthase n=2 Tax=Clostridia RepID=C4IG30_CLOBU Length = 269 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 66/233 (28%), Gaps = 40/233 (17%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + E DI+ + Y G +T + D ++ R+ + P Sbjct: 71 KGIISEDF-DIMEILLCYNNLGVRAFSV--LTEEDYFKGSD-EYLKRIKKSSMTPILRKD 126 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I + GAD I + + L D Sbjct: 127 FIIDFYQIYEAKVLGADGILLIASVLKD----------------------------QLGD 158 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC- 200 + + + + + K I +N + L+ K+++ Sbjct: 159 FYNEAKKFNLQPLVEVHNKEELDLALKYDCDVIGINNRDLKTFN--VSLDVTKELKRYIP 216 Query: 201 -HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG---ELKAYLA 249 L++ G ++E + +D V+G L F + I N E+K + Sbjct: 217 DDKILVSESGIMSIEDL-KTIKDYGVNGVLIGEFFMRNIDNAEFKNEVKKIIN 268 >UniRef50_A4RU69 Predicted protein n=3 Tax=Chlorophyta RepID=A4RU69_OSTLU Length = 345 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 1/99 (1%) Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCHVP 203 + + R ++ ET + + ++ G ++ R +K V E P Sbjct: 154 HVTCKIRLLESERETAELAKMIESCGVSAFAVHGRYIPQRPREPAHWNLIKNVVEAVDCP 213 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +IA+G E F A+ A + Sbjct: 214 VIANGDVECYEDFARIRAQTGAASAMCARGAQWNLSIFR 252 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 26/96 (27%), Gaps = 5/96 (5%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVID 74 K + + LAK G + R + + V E +D Sbjct: 155 VTCKIRLLESER---ETAELAKMIESCGVSAFAVHGRYIPQRPREPAHWNLIKNVVEAVD 211 Query: 75 IPFCVAGGIKSLED-AAKILSFGADKISINSPALAD 109 P G ++ ED A GA A + Sbjct: 212 CPVIANGDVECYEDFARIRAQTGAASAMCARGAQWN 247 >UniRef50_A5Z3X7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z3X7_9FIRM Length = 326 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 20/172 (11%), Positives = 57/172 (33%), Gaps = 13/172 (7%) Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + A +++ G DK + T++++ ++ + + N Sbjct: 76 KAANQLIELGYDKEINLNAGCPSGTVVSKNKGAGFLKDTEAMDRFFDETFNWLEKKNSEG 135 Query: 147 GDESRTRVTQWETLDWVQE------VQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV 199 + S + T+ + + K +++++ ++ + G ++E K E Sbjct: 136 HNLSISVKTRIGMYEPDEFENILEVYNKYPISQLIVHPRTREQLYKGTPNMEAFKYALEN 195 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVD------GALAASVFHKQIINIGELK 245 P+ +G T+E++ + D + + E+K Sbjct: 196 SKNPVCYNGDINTVENYHRIIEKINDDSEMKIGSIMIGRGLIGNPNLVNEIK 247 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 31/95 (32%), Gaps = 5/95 (5%) Query: 16 QVVKGVQFRNHEI-IGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK +I+ + Y + +L+ + T + + E Sbjct: 140 ISVKTRIGMYEPDEFENILEV---YNKYPISQLIVHPRTREQLYKGTPNMEAFKYALENS 196 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 P C G I ++E+ +I+ D + ++ Sbjct: 197 KNPVCYNGDINTVENYHRIIEKINDDSEMKIGSIM 231 >UniRef50_C4Z138 Indole-3-glycerol phosphate synthase n=2 Tax=Clostridiales RepID=TRPC_EUBE2 Length = 268 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 63/227 (27%), Gaps = 45/227 (19%) Query: 37 KRYAEEG--ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 KR + G AD + G ++ ++ ++ D+P I + Sbjct: 73 KRIKQYGESADAISCLTEEDHFKGS---TEYLKQIRQMTDLPIIRKDFIIDPYQVYEAKV 129 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 GAD + + + L D + + + Sbjct: 130 IGADAVLLIAAILDD---------------------------SRFKELYDLAYSLGLDVL 162 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC-------HVPLIAS 207 + + +Q + I +N N DL+ KK+ ++ L++ Sbjct: 163 CEVHNEEEMQRMLNLDVKIIGINNRNLKTF--EVDLDTTKKLADMVTPEMRKAGKLLVSE 220 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQI---INIGELKAYLATQ 251 G + + + D L +V + I E K + Sbjct: 221 SGVADTDDI-KVLAKSGADALLIGTVLMEAPKPEELISEFKEVYNAE 266 >UniRef50_A2DYY3 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DYY3_TRIVA Length = 313 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 1/94 (1%) Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASG 208 R + T E+L + + + GA I ++ R+G D E +K++ + + I +G Sbjct: 154 MRVKDTVEESLQFAKAMVDAGAVAITVHGRLAADKRHGSVDYEHMKEIFDNINCAKIGNG 213 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 G E D + A+ K Sbjct: 214 GICNKADAAEMRVKTGCDSIMIATAALKNPSVFS 247 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 13/118 (11%) Query: 3 AKRIIPCLDVRD--------GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA 54 ++ +DV VK + + + + AK + GA + + A Sbjct: 129 KMQLESAVDVVKTLKMNSPLPISVKMR---VKDTVEESLQFAKAMVDAGAVAITVHGRLA 185 Query: 55 SSDGRVV-DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI-LSFGADKISINSPALADP 110 + D + + + I+ GGI + DAA++ + G D I I + AL +P Sbjct: 186 ADKRHGSVDYEHMKEIFDNINCAKIGNGGICNKADAAEMRVKTGCDSIMIATAALKNP 243 >UniRef50_Q2S1Z5 Indole-3-glycerol phosphate synthase n=1 Tax=Salinibacter ruber DSM 13855 RepID=TRPC_SALRD Length = 270 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 71/232 (30%), Gaps = 35/232 (15%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D +A++YAE A + +G + +W+ P I Sbjct: 67 RDPFDPAAIAQQYAEHDAAAISVLTEPLHFEGALEHMAWIRAHVPET--PLLRKDFIIDP 124 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + + GAD + + + AL DP + L + ++ + + + K Q Sbjct: 125 YQLVEARAVGADAVLLIATAL-DPGQLAELHAAATELGLSCLVEVYEEEDLDKIDWEQ-- 181 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-- 204 + +N + DL+ ++ + + Sbjct: 182 ------------------------VSVLGVNNRDLHTF--EVDLDNSLRIFDQTPKGVGR 215 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 +A G E + R A V+G L + GE + L +G +I Sbjct: 216 VAESGLSDPETLVR-LRKAGVNGVLIGEHLMRAEH-PGEALSRLRAEGKKIA 265 >UniRef50_B2UDK9 Indole-3-glycerol phosphate synthase n=13 Tax=Bacteria RepID=TRPC_RALPJ Length = 267 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 29/224 (12%), Positives = 53/224 (23%), Gaps = 31/224 (13%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 +A+ YAE GA L G ++ +P + Sbjct: 75 LRPNFKPADIARSYAEHGAACLSVLTDEQFFQGHA---DYLREARAACTLPVLRKDFMVD 131 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 L + S+GAD I + AL + + Sbjct: 132 LYQVYEARSWGADCILLIVAALD---------------------------QGLMEELEAC 164 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI 205 + + + + + + +N N D ++ Sbjct: 165 ALELGMDVLVEVHDGHELDRALRLQTPLVGVNNRNLRTFETTLDTTLGLLKHMPDDRIVV 224 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G T + + A V+ L F + EL A Sbjct: 225 TESGILTPDDVRKMRAAA-VNAFLVGEAFMRADDPGAELARLFA 267 >UniRef50_B2KES4 Dihydrouridine synthase DuS n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KES4_ELUMP Length = 318 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 59/220 (26%), Gaps = 5/220 (2%) Query: 42 EGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKIS 101 G A ++ + + + GG A + A Sbjct: 41 AGIVCAEMVSAKAVEYDNKKSVKMLAVDKKEHPVSMQIFGGDAESISIAAKAAEAAGADI 100 Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 I+ A I R + + + +A + ++ Sbjct: 101 IDINAGCPVKKINRAGAGCVLIKDEKLLASIVNAAVNSVSIPVTLKTRIGLTAGDFKGDK 160 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + + GA ++++ V G DLE L KV +P+I +GG + + F Sbjct: 161 IAKLAENEGAAAVIMHARYAGNVHGGPADLEALAKVVSAVKIPVIGNGGIVDVNTADKMF 220 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLA---TQGVEIRI 257 V G + I + ++I Sbjct: 221 E-TGVRGIMVGRGAIGNINIFKSIINGCDIELNPKENVKI 259 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 42/134 (31%), Gaps = 1/134 (0%) Query: 34 PLAKRYAEEGADELVFYDITASS-DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 +AK EGA ++ + A + G D +++V + IP GGI + A K+ Sbjct: 160 KIAKLAENEGAAAVIMHARYAGNVHGGPADLEALAKVVSAVKIPVIGNGGIVDVNTADKM 219 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 G I + A+ + + + + ++ + + + Sbjct: 220 FETGVRGIMVGRGAIGNINIFKSIINGCDIELNPKENVKIFFNLIKQNVNFYGEKNGIAR 279 Query: 153 RVTQWETLDWVQEV 166 + Sbjct: 280 SRKTVGFWIKGFPM 293 >UniRef50_A9A299 Indole-3-glycerol-phosphate synthase n=2 Tax=Thaumarchaeota RepID=A9A299_NITMS Length = 258 Score = 65.5 bits (158), Expect = 1e-09, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 67/226 (29%), Gaps = 32/226 (14%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 I D V +A + G+ L +G + +V + +D+P + + Sbjct: 62 RTITDPVSIASQMIAGGSKALSVLTQPHLFNGSP---EYFMKVRQAVDVPMLMKDIMIDK 118 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + GAD + + L D + + + Y Sbjct: 119 VQIDAAKNIGADFMLVIQS-LFDQNFLKEIDEF-----------------------IAYG 154 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV--PL 204 + + + T + K A I +N N D + DL+ + + P+ Sbjct: 155 HKQGLQILLEVHTKQEFENALKTEADLIGINNRNLDTL--EIDLKTTETILSGIDKSRPI 212 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 ++ G T E + D L S K ++K + Sbjct: 213 LSESGIDTPEDIQ-YLKKCGADAFLIGSSIMKSDNIEEQVKKLVNA 257 >UniRef50_C1TL75 tRNA-dihydrouridine synthase n=2 Tax=Synergistaceae RepID=C1TL75_9BACT Length = 345 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 1/107 (0%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPF 77 K + D + A E GA + + TAS D V RVA + Sbjct: 153 KIRKIVPDGSGPDTLEFASALVEAGAANVGVHGRTASQRYEGTSDFDEVRRVARALPGVI 212 Query: 78 CVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 +G I ED +K L+ G + + + DP ++ R+ G Sbjct: 213 SASGDISGPEDVSKALAGGCVSVFLARGGVTDPFVLPRILSHLGYNI 259 Score = 63.6 bits (153), Expect = 5e-09, Method: Composition-based stats. Identities = 23/221 (10%), Positives = 60/221 (27%), Gaps = 12/221 (5%) Query: 37 KRYAEEGA-----DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS--LEDA 89 + + GA + + +T + + R + + G + A Sbjct: 40 RMFWRLGAGLAHTEMVSCAGLTRKNR---KTTEMLFRAPGEGPLVLQLFAGDSDTLMRGA 96 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 LS G ++ + + + + + Sbjct: 97 EIALSLGVPFDALGINMACPMPKVLKKGAGARLLSRLDLAVDMVRRLNRLGLPVWPKIRK 156 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASG 208 + +TL++ + + GA + ++ G D +++++V + ASG Sbjct: 157 IVPDGSGPDTLEFASALVEAGAANVGVHGRTASQRYEGTSDFDEVRRVARALPGVISASG 216 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 E +A A + + ++L Sbjct: 217 DISGPEDVSKAL-AGGCVSVFLARGGVTDPFVLPRILSHLG 256 >UniRef50_Q4PBU9 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4PBU9_USTMA Length = 477 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 25/224 (11%), Positives = 55/224 (24%), Gaps = 34/224 (15%) Query: 51 DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS-----LEDAAKILSFGADKISINSP 105 T R + + + + + S DA++++ D + +N Sbjct: 141 GCTNGEAEREAQAQHLKLAKQKVRVRGALVAQFASSKPEPFADASELIGRFVDGVDLNCG 200 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 L Q V R T V+ Sbjct: 201 CPQPWAYEELLGSYLLRQPETVRDMVRAVKARMGSDFCVSVK--IRIDPDLRLTDALVRN 258 Query: 166 VQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH----------------------- 201 GA + ++ + + +L+ +K + + Sbjct: 259 ALHAGASILQIHGRTRWQSSSEPVNLDGIKFAVDAANACGFRTSWGSKGGAAARFADGGS 318 Query: 202 ---VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 VP +A+G T++ + + GA++A Sbjct: 319 GGLVPCVANGDVWTLDDAIHYRQTTGCRGAMSARGLLANPALFS 362 Score = 47.4 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 31/132 (23%), Gaps = 37/132 (28%) Query: 16 QVVKGVQFRN---------HEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSW 65 + VK + + L + GA L + T V+ Sbjct: 227 RAVKARMGSDFCVSVKIRIDPDLRLTDALVRNALHAGASILQIHGRTRWQSSSEPVNLDG 286 Query: 66 VSRVAEVID--------------------------IPFCVAGGIKSLEDAAKILS-FGAD 98 + + + +P G + +L+DA G Sbjct: 287 IKFAVDAANACGFRTSWGSKGGAAARFADGGSGGLVPCVANGDVWTLDDAIHYRQTTGCR 346 Query: 99 KISINSPALADP 110 LA+P Sbjct: 347 GAMSARGLLANP 358 >UniRef50_D1YXT1 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YXT1_METPS Length = 376 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 15/182 (8%) Query: 1 MLAKRI---IPCLDVRDGQVV---KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA 54 ML RI D++ VV K D V LA+ + G D L Sbjct: 136 MLKDRIALARLVSDIKKTGVVLSLKMRSG-----AVDDVKLARILEKAGLDILHV----D 186 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 + R + + + ++ + + + + E A + S G+D +S+ A+A+P LI Sbjct: 187 AMGMRGTNLNAIKKLRDSTTLFIIGNNSVNNYETAQAMYSAGSDMVSVARAAMANPKLIK 246 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + Q G + T + + I Sbjct: 247 GIVSYIEDQQKQTGWYNAPSHICRGGDLRGLTWCCPPIKECPVHGALARANLSPEKFARI 306 Query: 175 VL 176 L Sbjct: 307 KL 308 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 5/86 (5%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 ++K G + ++ M G +L +KK+R+ + +I + E A A Sbjct: 175 LEKAGLDILHVDAMG----MRGTNLNAIKKLRDSTTLFIIGNNSVNNYETAQ-AMYSAGS 229 Query: 226 DGALAASVFHKQIINIGELKAYLATQ 251 D A I + +Y+ Q Sbjct: 230 DMVSVARAAMANPKLIKGIVSYIEDQ 255 >UniRef50_D1YNQ7 Indole-3-glycerol phosphate synthase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YNQ7_9FIRM Length = 509 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 62/213 (29%), Gaps = 33/213 (15%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + +AK Y GA + G DK ++ +A + IP I + Sbjct: 73 LDIAKEYEVAGAAAISVLTEPDFFKG---DKKYLQEIASAVKIPVLRKDFIIDEYQIYQA 129 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 +GA I + L P + + Sbjct: 130 KVWGASAILLICACLDVP---------------------------TLTKFRELADSLGLS 162 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE-QLKKVREVCHVPLIASGGAG 211 + + VQ + GA I +N N +L+ + + V ++ G Sbjct: 163 SLVEAHDEHEVQMAIECGARIIGVNNRNLKDFTVDVQNSVRLRNLVQD-DVIFVSESGLE 221 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 T E RD ++ AL F + + +L Sbjct: 222 TPEDIQ-VLRDNNIGVALMGETFMRSPNKVEKL 253 >UniRef50_A1UF85 Pyridoxine biosynthesis protein n=3 Tax=Mycobacterium RepID=A1UF85_MYCSK Length = 322 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 61/232 (26%), Gaps = 17/232 (7%) Query: 32 IVPLAKRYAEEGADELVFYDIT----ASSDG--RVVDKSWVSRVAEVIDIPFCVAGGIKS 85 A+ GA ++ + + G R+ D + + + + IP I Sbjct: 55 TPEQARIAEGAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIDAVTIPVMAKARIGH 114 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 +A + S G D S L + V G +A Sbjct: 115 FVEAQILQSLGVD-YVDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRITEGAAM 173 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-----GYDLEQLKKVREVC 200 + + ++K G L +++D + + + +V Sbjct: 174 IRSKGEAGTGDV--SNATTHMRKIGGEIRRLTSLSEDELYVAAKELQAPYDLVAEVARAG 231 Query: 201 HVPL--IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +P+ +GG T +G S K A + Sbjct: 232 KLPVTLFTAGGIATPADA-AMMMQLGAEGVFVGSGIFKSGNPAERAAAIVKA 282 >UniRef50_A1AW94 TIM-barrel protein, yjbN family n=2 Tax=Gammaproteobacteria RepID=A1AW94_RUTMC Length = 322 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 23/193 (11%), Positives = 63/193 (32%), Gaps = 14/193 (7%) Query: 72 VIDIPFCVAGGI--KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + + G + + A +G ++I+IN ++ + VV Sbjct: 58 EHPLVLQLGGSEPKEMAQAAKIAQDWGYNEININVGCPSNRVQSSNFGVCLMQTPQVVAQ 117 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY- 188 + + + + E +++V V+ G +V++ Sbjct: 118 CVDAMRQMVDVPITVKSRIGVDNMDSYDELVNFVATVESSGCDNLVIHARKAWLKGLSPK 177 Query: 189 --------DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + E++ +++ + H+ + +GG ME L+ VD + + Q Sbjct: 178 ENRSVPKLNYERVYQIKRDFPHLAIGINGGIMDMESSLQHLEH--VDSVMLGRAVYHQPY 235 Query: 240 NIGELKAYLATQG 252 + ++ + + Sbjct: 236 LLRKVDGLIYQKK 248 Score = 50.1 bits (118), Expect = 7e-05, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 19/135 (14%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGD-IVPLAKRYAEEGADELVFYDITASSDG- 58 M +P VK ++ D +V G D LV + A G Sbjct: 122 MRQMVDVP-------ITVKSRIGVDNMDSYDELVNFVATVESSGCDNLVIHARKAWLKGL 174 Query: 59 --------RVVDKSWVSRVAEVIDIPFCV-AGGIKSLEDAAKILSFGADKISINSPALAD 109 ++ V ++ GGI +E + + L D + + Sbjct: 175 SPKENRSVPKLNYERVYQIKRDFPHLAIGINGGIMDMESSLQHLEH-VDSVMLGRAVYHQ 233 Query: 110 PTLITRLADRFGVQC 124 P L+ ++ + Sbjct: 234 PYLLRKVDGLIYQKK 248 >UniRef50_C3WAT9 2-nitropropane dioxygenase n=5 Tax=Fusobacterium RepID=C3WAT9_FUSMR Length = 312 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 63/193 (32%), Gaps = 3/193 (1%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVID 74 VVKG I + LAK + GAD +V + + + + ID Sbjct: 107 VVKGT-GVKVIPIVSTLKLAKISQKLGADAIVVEGGNAGGHLGTNLDSWDIMEEITKNID 165 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 IP AGG+ + EDA ++LS G D + + S +A + G Sbjct: 166 IPVFGAGGVITPEDAERMLSLGVDGVQMGSRFVASEECEVDDFFKNMYVNAKEGDIVEMM 225 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + G + + + + K+ + +N G Y+ Sbjct: 226 SSAGLPANAIISPFVQKILDDNPDKPTHCVKCLKKCTYKFCVNERLVRGHNGDYEGGIFF 285 Query: 195 KVREVCHVPLIAS 207 ++ + I S Sbjct: 286 AGKDAWKINEILS 298 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 50/178 (28%), Gaps = 3/178 (1%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + VA + + + E A+I + + Sbjct: 26 KLAAAVANEGGVGVIAGTTLSTDELKAEIKKARDMITNEGGALAVNIMFAVTNFMDLVKA 85 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 I GID + + + TL + QK GA IV+ N G Sbjct: 86 SIEAGIDIIIFGAGFSRDIFEVVKGTGVKVIPIVSTLKLAKISQKLGADAIVVEGGNAGG 145 Query: 184 VRNG--YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + ++++ + +P+ +GG T E VDG S F Sbjct: 146 HLGTNLDSWDIMEEITKNIDIPVFGAGGVITPEDAERML-SLGVDGVQMGSRFVASEE 202 >UniRef50_Q03148 Pyridoxine biosynthesis protein SNZ1 n=262 Tax=cellular organisms RepID=SNZ1_YEAST Length = 297 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 68/250 (27%), Gaps = 14/250 (5%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY------DITASSDGRVVDKSW 65 ++ G +++ AK + GA ++ + R+ D Sbjct: 8 IKSGLAQMLKGGVIMDVV--TPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKM 65 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS-PALADPTLITRLADRFGVQC 124 + + + IP I +A I + D I + AD T Sbjct: 66 IKDIMNSVSIPVMAKVRIGHFVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFV 125 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN--MMNQD 182 + T E+ T + ++ A + + + + + Sbjct: 126 CGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKV 185 Query: 183 GVRNGYDLEQLKKVREVCHVPLI--ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + LK V E +P++ A+GG T DG S K Sbjct: 186 AEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADA-ALLMQLGCDGVFVGSGIFKSSNP 244 Query: 241 IGELKAYLAT 250 + A + Sbjct: 245 VRLATAVVEA 254 >UniRef50_P25170 N-(5'-phosphoribosyl)anthranilate isomerase n=11 Tax=Dikarya RepID=TRPG_PHACH Length = 788 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 55/222 (24%), Gaps = 31/222 (13%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDI-PFCV-AGGIKSLE 87 G+ A YA GA + G ++D + + + P + I Sbjct: 310 GNAAQQALTYALAGASVISVLTEPTWFKGSLLDMRLARQAIDNLPHRPAILRKDFIIDEY 369 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 + GAD + + L + + Y+ Sbjct: 370 QIDEARLHGADTVLLIVATLTEK---------------------------RLEELYAYSQ 402 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIA 206 + + ++ K GA I +N N +L ++ V L A Sbjct: 403 SLGMEPLVEVNNAKEMEIALKLGAKVIGVNNRNLHDFNVDMGTTSRLAEMVRERDVILCA 462 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 G + V L + ++ L Sbjct: 463 LSGIKDAQDVNTYVEQ-GVGAVLVGESLMRAPDTRAFIRQLL 503 >UniRef50_Q583Y8 TRNA-dihydrouridine synthase 4, putative n=4 Tax=Trypanosoma RepID=Q583Y8_9TRYP Length = 419 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 7/146 (4%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDI 75 VVK + + V A++ GA + + T S V ++ + E + + Sbjct: 189 VVKMRVKDDVRLS---VDFARQCEAAGAAWITVHGRTPNCSAHAPVRFDAINTIREALGV 245 Query: 76 PFCVAGGIKSLEDA-AKILSFGADKISINSPALADPTLIT--RLADRFGVQCIVVGIDTW 132 P GG++ A L+ G + LA+P ++F + + T Sbjct: 246 PVVANGGVRDPSTALQAALTAGVGGVMSGMGLLANPACFYVPGADEKFHFEPQHIAYGTG 305 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWE 158 V + D + ++ Sbjct: 306 SCPWESGSEVREEHIDARKRCLSTGH 331 Score = 53.2 bits (126), Expect = 7e-06, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 42/124 (33%), Gaps = 1/124 (0%) Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ 156 D I +N + L VV + V + R + Sbjct: 139 CDAIDLNCGCPQRRVMADGLGAALLRNPEVVADTVRCVRNALEGGVELPCVVKMRVKDDV 198 Query: 157 WETLDWVQEVQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 ++D+ ++ + GA I ++ + + + +RE VP++A+GG Sbjct: 199 RLSVDFARQCEAAGAAWITVHGRTPNCSAHAPVRFDAINTIREALGVPVVANGGVRDPST 258 Query: 216 FLEA 219 L+A Sbjct: 259 ALQA 262 >UniRef50_B0C3E9 tRNA-dihydrouridine synthase A n=4 Tax=Bacteria RepID=B0C3E9_ACAM1 Length = 335 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 46/199 (23%), Gaps = 16/199 (8%) Query: 72 VIDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 + V G E A +G D+I++N + Q V Sbjct: 64 EKPLVLQVGGDNPQDLAECARIATDWGYDEINLNVGCPSSRVQNGHFGACLMAQPDRVAA 123 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 + V+ + +VQ V G ++ Sbjct: 124 CVEAMMQATHLPVSVKHRIGIDDCDRYEDMAHFVQTVAASGCQIFSVHARKAWLKGLSPK 183 Query: 190 ---------LEQLKKVREVCHVPLI-ASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 E + ++++ I +GG + VD + + Sbjct: 184 ENRDIPPLRYEDVYRLKQNFSHLWIEINGGFIQLFQVHNQL--PKVDAVMIGRAAYDNPY 241 Query: 240 NIGELKA--YLATQGVEIR 256 + Y + R Sbjct: 242 LFATVDRDFYHEDRSAPSR 260 >UniRef50_B8LBY8 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LBY8_THAPS Length = 242 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 5/79 (6%) Query: 170 GAGEIVLNMM-----NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 GA I ++ + R +E ++++++ VP+I +G T E Sbjct: 164 GANAIAIHGRIVGDESHTMARWETLIEVVRQLKQTESVPIIVNGDLYTRADIQEMKSRTG 223 Query: 225 VDGALAASVFHKQIINIGE 243 DG + A I + Sbjct: 224 CDGVMLARPALYNISIFRK 242 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 39/118 (33%), Gaps = 9/118 (7%) Query: 6 IIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVD 62 II L ++ K + + + GA+ + + + Sbjct: 126 IISTLRRNLNKPVSAKIRLLDPDNP-KPTLDFVRALIKAGANAIAIHGRIVGDESHTMAR 184 Query: 63 K----SWVSRVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITR 115 V ++ + +P V G + + D ++ G D + + PAL + ++ + Sbjct: 185 WETLIEVVRQLKQTESVPIIVNGDLYTRADIQEMKSRTGCDGVMLARPALYNISIFRK 242 >UniRef50_A2RK21 Indole-3-glycerol phosphate synthase n=45 Tax=Bacilli RepID=TRPC_LACLM Length = 264 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 55/207 (26%), Gaps = 34/207 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 DI+ AK Y + GA + G + ++ +++ + IP I + Sbjct: 69 DIIAQAKNYEQAGAAMISVLTDPVFFKG---NIEYLREISKNVQIPTLNKDFIIDKKQIN 125 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + L+ GA I + + + Y Sbjct: 126 RALNAGATVILLIVACFENDFEKLE-------------------------ELYNYAISLG 160 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL--EQLKKVREVCHVPLIASG 208 + + + + A I +N N + + +E I+ Sbjct: 161 LEVLVETHNKAELDRAHQLAAKIIGVNNRNLKTFEVSLQNSTDLVPYFKEE--NVYISES 218 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFH 235 G + + + +G L + Sbjct: 219 GIFGKKEAQKVAEN--FNGILVGTALM 243 >UniRef50_C3N6C8 Pyridoxal biosynthesis lyase pdxS n=28 Tax=cellular organisms RepID=PDXS_SULIA Length = 338 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 63/224 (28%), Gaps = 11/224 (4%) Query: 33 VPLAKRYAEEGADELVFYD------ITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 V A+ E GA ++ D + R+ D + V I IP I Sbjct: 70 VQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHY 129 Query: 87 EDAAKILSFGADKISINS--PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 +A + + G D I + + I + + + + Sbjct: 130 YEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTAEGASMIR 189 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 G+ V++ + + R + + + ++ ++ +P+ Sbjct: 190 TKGEAGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAREYQVPYQLVELTAKIKRLPI 249 Query: 205 I--ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + A+GG T DG S K KA Sbjct: 250 VNFAAGGIATPADA-ALMMWLGADGLFVGSGIFKSQDPDERAKA 292 >UniRef50_D1RLX1 Indole-3-glycerol phosphate synthase n=1 Tax=Legionella longbeachae D-4968 RepID=D1RLX1_LEGLO Length = 259 Score = 64.7 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 56/221 (25%), Gaps = 33/221 (14%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 ++V + K YA GA L G ++++ ++P I Sbjct: 70 NVVEITKIYALHGARCLSVLTDIDFFQGHP---DYLAQAKMHCNLPVLRKDFILDTYQIY 126 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + L+ GAD I + L D Q + Sbjct: 127 ESLALGADCILLIVALLDD---------------------------AQLIEFCQLAQELG 159 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE-QLKKVREVCHVPLIASGG 209 + + T + ++ + I +N + L LK + I G Sbjct: 160 MAVLVESHTQEELERALRLPTPLIGVNNRSLHTFHTNIQLSIDLKHYIPKDRIT-ITESG 218 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 T + ++ L + L + Sbjct: 219 INTHADI-RLMQSHGINTFLVGESLMRAKDIGKALDQLIEG 258 >UniRef50_D1BQN6 Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase n=7 Tax=Firmicutes RepID=D1BQN6_VEIPT Length = 488 Score = 64.4 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 62/213 (29%), Gaps = 33/213 (15%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + +AK Y GA + G DK ++ +A + IP I + Sbjct: 73 LDIAKEYEVAGAAAISVLTEPDFFKG---DKKYLQEIASAVKIPVLRKDFIIDEYQIYQA 129 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 +GA I + LA P + + Sbjct: 130 KVWGASAILLICACLAVP---------------------------TLTKFRELADSLGLS 162 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE-QLKKVREVCHVPLIASGGAG 211 + + VQ GA I +N N +L+ + + V ++ G Sbjct: 163 SLVEAHDEHEVQMAIDCGARIIGVNNRNLKDFTVDVQNSVRLRNLVQD-DVIFVSESGLE 221 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 T E RD ++ AL F + + +L Sbjct: 222 TPEDIQ-VLRDNNIGVALMGETFMRSPNKVEKL 253 >UniRef50_D1AMN2 Dihydrouridine synthase DuS n=3 Tax=Bacteria RepID=D1AMN2_SEBTE Length = 337 Score = 64.4 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 64/236 (27%), Gaps = 34/236 (14%) Query: 44 ADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA-DKISI 102 A ++ D+ + ++A + A K A D+I++ Sbjct: 41 AQAIIHGDLERILGFDEAEHPIALQIAATTP---------EDAYKAVKTAENYAYDEINL 91 Query: 103 NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR----------- 151 N +D + +V E V Sbjct: 92 NVGCPSDRVSGNMMGACLMAYPELVLDILKAIKEATGKAVTIKHRIGIDGKGILPDNAEK 151 Query: 152 -TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL----------EQLKKVREVC 200 + L+++ ++K GA ++ E + E Sbjct: 152 TLFDKYEDMLNFINIIEKAGADRYTVHARIAVLAGLDPKQNREVPPLRYDEVYRLKAEKP 211 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 ++ + +GG T E E + VDG + F+ + + E+ ++ I Sbjct: 212 YMQIEINGGIKTKEDITEHLKY--VDGVMIGREFYDNPMLLAEVNSFYNNGEENIS 265 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 46/169 (27%), Gaps = 32/169 (18%) Query: 9 CLDVRD------GQVV--KGVQFRNHE-------------IIGDIVPLAKRYAEEGADEL 47 LD+ G+ V K + + D++ + GAD Sbjct: 116 VLDILKAIKEATGKAVTIKHRIGIDGKGILPDNAEKTLFDKYEDMLNFINIIEKAGADRY 175 Query: 48 VFYDITASSDG---------RVVDKSWVSRVAEVIDIPFC-VAGGIKSLEDAAKILSFGA 97 + A G + V R+ + GGIK+ ED + L + Sbjct: 176 TVHARIAVLAGLDPKQNREVPPLRYDEVYRLKAEKPYMQIEINGGIKTKEDITEHLKY-V 234 Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 D + I +P L+ + + + + + Sbjct: 235 DGVMIGREFYDNPMLLAEVNSFYNNGEENISRYQVLEKMIPYLEKMEMN 283 >UniRef50_C1KVS7 Indole-3-glycerol phosphate synthase n=28 Tax=Bacilli RepID=TRPC_LISMC Length = 252 Score = 64.4 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 61/221 (27%), Gaps = 37/221 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + V AK Y GA + G + D + VA+ ++IP I S + Sbjct: 64 NPVLQAKSYQAAGAGMISVLTDPVFFKGSIED---LREVAKNVEIPVLCKDFIISEKQLI 120 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GA + + AL + LI + V+ Sbjct: 121 RARNAGATVVLLIISALTEEMLIALFEQALALDLEVLV---------------------- 158 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVRE--VCHVPLIASG 208 + + QK GA I +N N D+ +++ I+ Sbjct: 159 -----EVHDQKELAVAQKIGAKLIGVNNRNLHTF--EVDIAVSERLASDFSSDACFISES 211 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G T E + + L + L Sbjct: 212 GFRTAEDVARVSQKYNA--VLVGEALMR-EATPEAAAKSLK 249 >UniRef50_A8MRX7 Uncharacterized protein At3g63510.2 n=5 Tax=Arabidopsis thaliana RepID=A8MRX7_ARATH Length = 386 Score = 64.4 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 21/214 (9%), Positives = 51/214 (23%), Gaps = 30/214 (14%) Query: 44 ADELVFY---DITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKILSF-GAD 98 A E + + ++ + I + G +++L AAK+ G D Sbjct: 53 AAETLVHQQTNLDRFLAFSP----------QQHPIVLQLGGSNVENLAKAAKLSDAYGYD 102 Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 +I++N P + + + A +V Sbjct: 103 EINLNCGCP-SPKVAGHGCFGVSLMLKPKLVGEAMSAIAANTNVPVTVKCRIGVDNHDSY 161 Query: 159 TLDWVQEVQKR---GAGEIVLNMMNQDGVRNGYD----------LEQLKKVREVCHVPLI 205 + +++ VR+ + Sbjct: 162 DELCDFIYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFT 221 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +GG ++ A ++ G + + Sbjct: 222 INGGITSVSKVNAALKE-GAHGVMVGRAAYNNPW 254 >UniRef50_Q1AU90 Indole-3-glycerol phosphate synthase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AU90_RUBXD Length = 255 Score = 64.4 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 56/218 (25%), Gaps = 35/218 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D A Y +GA L G + R E +P Sbjct: 71 DPAEQAALYERQGARCLSVLTEPERFRGS---LEDLRRAREASSLPVLRKDFTVDEAQVL 127 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + AD + + + L +A G+ Sbjct: 128 E-AAARADAVLLIAALFTGEELARYVALA---------------------------GEVG 159 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGG 209 + + + GA + +N + DL +++ + + +A G Sbjct: 160 VDALVEVHDEREAELALAAGASIVGVNNRDLRDF--SVDLGTFERLSPLLEGVVRVAESG 217 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 T E R+A D L + +G + A Sbjct: 218 IKTAEDARRM-REAGADAVLVGEAAMRDPGLVGRIAAI 254 >UniRef50_A9V413 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V413_MONBE Length = 487 Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 53/186 (28%), Gaps = 8/186 (4%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 R + G + AA++ A ++ + P + + G Sbjct: 66 EVAFRTCAEEKNRVILQIGTSDPDRAARVAQMMAADVAGIDVNMGCPKPFS-IKGDMGAA 124 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 + + + + R T ETL+ V +Q G + ++ + Sbjct: 125 LLRQPDRVRDILTSLVATTTKPITCKIRVLPTLEETLNLVNIIQDAGVAALGIHGRVPNQ 184 Query: 184 VRNGY----DLEQLKKVREVCHVPLIASGG---AGTMEHFLEAFRDADVDGALAASVFHK 236 E ++ V + C +P+I +GG + + L + A Sbjct: 185 RPREPITDYQYEAIRAVAKACRIPVICNGGSLDMDSYDDILAFRDKCGCSSVMVARAAQY 244 Query: 237 QIINIG 242 + Sbjct: 245 NMSIFS 250 Score = 48.2 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 29/105 (27%), Gaps = 11/105 (10%) Query: 14 DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV----VDKSWVSRV 69 K + + + L + G L + + R + V Sbjct: 145 KPITCKIR---VLPTLEETLNLVNIIQDAGVAALGIHGRVPNQRPREPITDYQYEAIRAV 201 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILS----FGADKISINSPALADP 110 A+ IP GG ++ IL+ G + + A + Sbjct: 202 AKACRIPVICNGGSLDMDSYDDILAFRDKCGCSSVMVARAAQYNM 246 >UniRef50_C4Q4G5 tRNA-dihydrouridine synthase, putative n=1 Tax=Schistosoma mansoni RepID=C4Q4G5_SCHMA Length = 370 Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 9/85 (10%), Positives = 19/85 (22%), Gaps = 9/85 (10%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQ---------LKKVREVCHVPLIASGGAGTMEHF 216 + G + L+ +K +P+I +G + Sbjct: 210 LAVMGVDWVTLHARTPQQRSRDCASWNVVQELVDCKIKHCYLGTDIPIILNGDVRGLNDA 269 Query: 217 LEAFRDADVDGALAASVFHKQIINI 241 +A G + K Sbjct: 270 YDAQETTGCHGVMVGRALLKFPHLF 294 Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 10/90 (11%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEV--------IDIPFCVAGG 82 V L +R A G D + + T R + V + + DIP + G Sbjct: 203 TVELVRRLAVMGVDWVTLHARTPQQRSRDCASWNVVQELVDCKIKHCYLGTDIPIILNGD 262 Query: 83 IKSLEDAAKILS-FGADKISINSPALADPT 111 ++ L DA G + + L P Sbjct: 263 VRGLNDAYDAQETTGCHGVMVGRALLKFPH 292 >UniRef50_B2A0N8 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0N8_NATTJ Length = 331 Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 37/107 (34%), Gaps = 4/107 (3%) Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR----NGYDLEQLKKVREVCHVPLI 205 +T + + +E+ + G I ++ + GY + ++++ P++ Sbjct: 225 YDKGLTMPDAIWIAKELVRNGVDIIDVSGGHGGYRGHTRSQGYFVPIAVEIKQNLTQPVM 284 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +GG + ++ E + +D + K L + Sbjct: 285 VAGGISSPQYANEVIEEEGLDFVGVGRALLSRPDWPYMAKQELINRK 331 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 5/106 (4%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR----VVDKSWVSRVAEVIDIPFCV 79 + D + +AK G D + G + + + P V Sbjct: 226 DKGLTMPDAIWIAKELVRNGVDIIDVSGGHGGYRGHTRSQGYFVPIAVEIKQNLTQPVMV 285 Query: 80 AGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQC 124 AGGI S + A +++ G D + + L+ P + Sbjct: 286 AGGISSPQYANEVIEEEGLDFVGVGRALLSRPDWPYMAKQELINRK 331 >UniRef50_A8F3E7 N-acylglucosamine-6-phosphate 2-epimerase n=1 Tax=Thermotoga lettingae TMO RepID=A8F3E7_THELT Length = 222 Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 41/237 (17%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV--- 79 + + IV +A+ GA + R + V V + + IP Sbjct: 17 GDPVQDVSFIVNMARSADYAGAVAV-----------RTNNADHVRAVKDSVSIPVIGLVK 65 Query: 80 ----AGGIK-SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 I + E A ++ GAD ++I+ P + L + VGI Sbjct: 66 DRNYQAFITPTFEHARDVIKAGADFVAIDCTRSERPVQLKTLFEEIRSSFPDVGIIADIA 125 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 E V+ D T + + + ++E ++ Sbjct: 126 DEADAELVSALRPDFIATTLCGYTPYTLGCSL---------------------PNIELVR 164 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + +P+IA GG T+E AF++ + + + I I + + Sbjct: 165 GLSRKMSIPIIAEGGYTTLEEVQNAFQN-GAYAVVIGTAITRPWITIKKFVDLFYKK 220 >UniRef50_A8NM76 N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NM76_COPC7 Length = 886 Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 58/218 (26%), Gaps = 32/218 (14%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSR-VAEVIDIPFCV- 79 + + + A YA+ GA + G ++D V V+ P + Sbjct: 99 KGDIDVNVNVALK-ATNYAKAGAAVISVVTEPTWFKGSLLDLRTVREAVSSRSHRPAILR 157 Query: 80 AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 I + +GAD + + L Sbjct: 158 RDFILDEYQIDEARVYGADAVLLIVAMLTPE---------------------------RL 190 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVRE 198 + ++ + + + ++ GA I +N N + +L + + Sbjct: 191 KALYHHSLSRGMEPLIEVNNAEEMKRALDLGAKVIGINNRNLQDFQLDTGTTTRLADMVQ 250 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 V L A GG + + + V + + Sbjct: 251 GKDVILCAMGGIQSSSDV-ALYAEHGVGAVMVGEALMR 287 >UniRef50_A0B9E0 Indole-3-glycerol phosphate synthase n=1 Tax=Methanosaeta thermophila PT RepID=A0B9E0_METTP Length = 248 Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 26/240 (10%), Positives = 57/240 (23%), Gaps = 43/240 (17%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW 65 +IP + +K G+ +A+ Y GA + G + Sbjct: 43 LIPVI-----AEIKPRAISRPLRAGEAGEIARFYESRGACGISVLTEPTYFLGSISSLE- 96 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 +P I + + + + Sbjct: 97 --EARRSTSLPVLRKDFIINRKQIREARADLV---------------------------- 126 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + + + + + + GA + +N + + Sbjct: 127 -----LLIVSIADIEDLIEDVRAAGMEPLVEVHDEHELDRAANAGATIVGINNRDLITLE 181 Query: 186 NGY-DLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 E L + + +A G + E L +A D L + K +GE+ Sbjct: 182 VDLGRFEALGPIARDIGLFTVAESGVSSREEALRMM-NAGADALLIGNSIMKNPALLGEI 240 >UniRef50_Q03X00 Indole-3-glycerol phosphate synthase n=13 Tax=Lactobacillales RepID=TRPC_LEUMM Length = 262 Score = 64.0 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 58/220 (26%), Gaps = 36/220 (16%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 +AK Y G D + G + VA P + Sbjct: 77 IAKDYEVAGVDAISVLTEENYFKGS---LDILKTVAADSATPVLRKDFTIDPYMIYEAKV 133 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 G+ I + L D L L+ + V+ Sbjct: 134 AGSQIILLIVAILTDEQLKEYLSLANELGLSVIV-------------------------- 167 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH--VPLIASGGAGT 212 + + + K A I +N N D + K++R++ + I+ G Sbjct: 168 -EAHNEEEILRAVKANARIIGVNNRNLKDFT--VDFDNTKRLRQLVPPEILFISESGIKD 224 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + VDG L F K + ++ L + Sbjct: 225 RSDVVT-LEQIGVDGILVGETFMKAADKLAAIQQ-LRGEK 262 >UniRef50_UPI0001C3231B Indole-3-glycerol-phosphate synthase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3231B Length = 264 Score = 64.0 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 51/215 (23%), Gaps = 32/215 (14%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + Y GA L G + E +P + + Sbjct: 74 EIVGSYERAGAAALSVLTERHHFGGS---LDDLRAAKEAARLPILRKDFVVDTYQVYESA 130 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GAD I + AL L A+ + V+ Sbjct: 131 VAGADAILLIVAALEPRELARLHAEALALDLDVLVEVH---------------------- 168 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC-HVPLIASGGAGT 212 + + +++ A I +N + + + ++ +++ G T Sbjct: 169 ----DEPELEIALERVDADVIGINNRDLTDFTVDVQR-TFELLADIPAGKTVVSESGIST 223 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 + E VD L + + Sbjct: 224 RDQLDE-LERVGVDAVLVGEALMRADDVEAACREL 257 >UniRef50_C8WX60 Indole-3-glycerol-phosphate synthase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WX60_ALIAD Length = 267 Score = 64.0 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 56/211 (26%), Gaps = 33/211 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D A+ Y + GA + +T + + + +P + Sbjct: 70 DPAERARVYEQGGASAISV--LTDETYFHGA-LEDLRAARSAVHLPILRKDFVIDEIQVD 126 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + +S GAD + + + A+ +++Y Sbjct: 127 EAVSAGADILLLIAAAMPA---------------------------DRLVELSRYARARG 159 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGG 209 + + D V+ I +N + + + +R + L IA G Sbjct: 160 LEVLLEVHGEDEVEAALAAEPTLIGINNRDLRTFEVDLATSE-RVLRRLPEGSLAIAESG 218 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 E L A G L + + Sbjct: 219 IMGREDALRM-ASAGARGILVGELLMRHADL 248 >UniRef50_A3PE78 Putative uncharacterized protein n=1 Tax=Prochlorococcus marinus str. MIT 9301 RepID=A3PE78_PROM0 Length = 222 Score = 64.0 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 12/213 (5%) Query: 45 DELVFYDITA---SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKIS 101 DE++ +++ + +S + +P + G I+S+E+A ++ +FGADKI Sbjct: 15 DEILIINLSEKNWEEAYNNKFFNDISLLLSKTFLPITIGGKIRSIENAKELFNFGADKIL 74 Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 I+ D L+ + D +GVQ IVV D + + Sbjct: 75 ISRAFFQDQNLLKEIRDLYGVQSIVVQFDINSQNYDIFINSS--------LEKVSNLKKI 126 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 +K GE+++N +++DG G++ E L + + ++PLIASGG G+ H E + Sbjct: 127 VYSLNEKNLMGELIINQIDRDGTGFGHNTEYLNAIPK-LNMPLIASGGFGSSIHMAECLK 185 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + +++ + E + L E Sbjct: 186 FDSISAVATSNLLNFIGDAFSEARQELRKMNFE 218 Score = 47.4 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 1/83 (1%) Query: 173 EIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 I L+ N + N + + +P+ G ++E+ E F D L + Sbjct: 19 IINLSEKNWEEAYNNKFFNDISLLLSKTFLPITIGGKIRSIENAKELFNF-GADKILISR 77 Query: 233 VFHKQIINIGELKAYLATQGVEI 255 F + + E++ Q + + Sbjct: 78 AFFQDQNLLKEIRDLYGVQSIVV 100 >UniRef50_B8ZUG3 Pyridoxal biosynthesis lyase pdxS n=332 Tax=cellular organisms RepID=PDXS_MYCLB Length = 307 Score = 64.0 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 51/228 (22%), Gaps = 13/228 (5%) Query: 34 PLAKRYAEEGADELVFYDIT----ASSDG--RVVDKSWVSRVAEVIDIPFCVAGGIKSLE 87 A+ GA ++ + + G R+ D + + + IP I Sbjct: 42 EQARIAEGSGAVAVMALERVPSDIRAQGGVSRMSDPDMIESIIAAVTIPVMAKARIGHFV 101 Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +A + S G D S L + V G +A Sbjct: 102 EAQILQSLGVD-YIDESEVLTPADYTHHIDKWKFTVPFVCGATNLGEALRRINEGAAMIR 160 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN---QDGVRNGYDLEQLKKVREVCHVPL 204 + + + E + +V +P+ Sbjct: 161 SKGEAGTGDVSNATTHMRAIAGDIRRLTSLSEDELYVAAKELHAPYELVIEVARTNKLPV 220 Query: 205 --IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +GG T +G S K A + Sbjct: 221 TLFTAGGIATPADA-AMMMQLGAEGIFVGSGIFKSSDPAQRAAAIVKA 267 >UniRef50_A9BHQ5 Indole-3-glycerol phosphate synthase n=1 Tax=Petrotoga mobilis SJ95 RepID=TRPC_PETMO Length = 253 Score = 64.0 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 60/221 (27%), Gaps = 26/221 (11%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + Y + GAD + G + + ++P I Sbjct: 54 DPQRQLELYIKGGADAISILTDEKYFQGSTN---ILKELRPKTNLPILRKDFIIDPIQIY 110 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + L GA+ I + + L + L + + + T Sbjct: 111 QSLFLGANVILLIASILTKKEISNFLKISKDIGLEAIVEVHNHQELTKVLDTET------ 164 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 + G L+ + LE+L+K+ + +I+ G Sbjct: 165 ----------------EILGINNRDLSDFSLSLRNTEKLLEELEKLGKRRDFYVISESGI 208 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + R +VDG L K+ + ++ + Sbjct: 209 KEKSDI-DYLRSLEVDGVLIGEALMKENDPVLKIGELFPEK 248 >UniRef50_A2ST44 Histidine biosynthesis protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2ST44_METLZ Length = 221 Score = 64.0 bits (154), Expect = 5e-09, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 75/245 (30%), Gaps = 30/245 (12%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDK 63 ++I +D+ DG VV G + + E L V D Sbjct: 1 MKVILAMDLMDGYVVHGKSGNRDHY--KPLTWGLSPSAEPLSYLSVM---KPKYAYVADL 55 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAK--ILSFGADKISINSPALADPTLITRLADRFG 121 + + + I L + + G P +A+ Sbjct: 56 DRIGMCGDHTET-------ILRLASIPEKLWVDRGCSIPEEYLPGVANIIGTETADA--- 105 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 E + + + ++ ++E K I+L ++ Sbjct: 106 ------------PFEEFTGGYLSVDVKDGKVIPDGLDPVEVIREADKYAFDGIILLNISS 153 Query: 182 DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 G +G DL+ K++R PL+ GG T++ DA DG + ++ HK I + Sbjct: 154 VGTESGIDLDFAKRIRAATKKPLLYGGGVNTLDDL-RTLCDAGYDGVIISTSVHKGKIPV 212 Query: 242 GELKA 246 ++ Sbjct: 213 EIVQE 217 Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 44/116 (37%), Gaps = 8/116 (6%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWV 66 +DV+DG+V+ D V + + + D ++ +I++ +D + Sbjct: 114 YLSVDVKDGKVI--------PDGLDPVEVIREADKYAFDGIILLNISSVGTESGIDLDFA 165 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 R+ P GG+ +L+D + G D + I++ + + + Sbjct: 166 KRIRAATKKPLLYGGGVNTLDDLRTLCDAGYDGVIISTSVHKGKIPVEIVQEGTFC 221 >UniRef50_A5DTS1 tRNA-dihydrouridine synthase 3 n=2 Tax=Saccharomycetales RepID=DUS3_LODEL Length = 642 Score = 63.6 bits (153), Expect = 5e-09, Method: Composition-based stats. Identities = 16/177 (9%), Positives = 40/177 (22%), Gaps = 21/177 (11%) Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 +I++N D + + Sbjct: 356 LHVSEINLNCGCPIDLLFKQGQGSALLDSPPRLIRIVKAMNASSGDIPVTIKIRTGVKEN 415 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVP---------- 203 + +++ I L+ ++ D + +++V +V Sbjct: 416 KNTAVHLVNRVLEETQVAAITLHGRSRQQRYTKEADWDYIEEVGKVVKTWNEKREDEDKE 475 Query: 204 --------LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG--ELKAYLAT 250 + +G + E + VD + A + E + YL Sbjct: 476 GRDTNPTWFVGNGDVYSHEDWYNGVNREGVDSVMVARGALIKPWIFEEVEAQQYLDK 532 >UniRef50_A3ESF1 Indole-3-glycerol phosphate synthase n=3 Tax=Leptospirillum RepID=A3ESF1_9BACT Length = 274 Score = 63.6 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 62/227 (27%), Gaps = 33/227 (14%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSR-VAEVIDIPFCVAGGIKS 85 D + + Y GA + G D + +A +PF + Sbjct: 76 REPYDPMAIVSGYLMNGASGISVLTDGPFFGGHPDDLRLLKEKLARETRVPFLRKDFLIL 135 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + GAD + + + L+ L +A Sbjct: 136 PYQIWESRCLGADIVLLIARILSFERLSEMIALS-------------------------- 169 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL- 204 + + + + + + G+ + +N + D + DL +K+ + Sbjct: 170 -RRLGLSALVEVHSREELDMALDAGSDLVGINHRDLDSL--VIDLGLSEKLAPHIPKGVL 226 Query: 205 -IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +A G T E + D D L F LK +L Sbjct: 227 RVAESGLKTPED-RKRMEDLGYDAVLVGESFLTAPDPGVALKEFLRD 272 >UniRef50_A4HJH5 Dihydrouridine synthase (Dus), putative n=3 Tax=Leishmania RepID=A4HJH5_LEIBR Length = 666 Score = 63.6 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 37/141 (26%), Gaps = 6/141 (4%) Query: 35 LAKRYAEEGADELVFYDITASSDGRV---VDKSWVSRVAEVID--IPFCVAGGIKSLEDA 89 A+ + GA L + T G+ + + RV + IP G +++ +D Sbjct: 391 YARMIRDAGAQVLCIHGRTREMKGQHTGTANMELIRRVRLALSGTIPVISNGNVRTYDDV 450 Query: 90 AKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 L + P L DP L + + + V Sbjct: 451 IAHLQETRCEGHMCAEPLLWDPKLFSNPSQPVMPGRTHSADKATRLSALHTALVYMQWVR 510 Query: 149 ESRTRVTQWETLDWVQEVQKR 169 + + + Sbjct: 511 HYPVDIGFVKAHLFKMCFHSY 531 Score = 63.2 bits (152), Expect = 8e-09, Method: Composition-based stats. Identities = 11/86 (12%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREVCH--VPLIASGGAGTMEHF 216 + + ++ GA + ++ ++ ++E +++VR +P+I++G T + Sbjct: 391 YARMIRDAGAQVLCIHGRTREMKGQHTGTANMELIRRVRLALSGTIPVISNGNVRTYDDV 450 Query: 217 LEAFRDADVDGALAASVFHKQIINIG 242 + ++ +G + A Sbjct: 451 IAHLQETRCEGHMCAEPLLWDPKLFS 476 >UniRef50_C9KKE5 Dihydroorotate oxidase n=6 Tax=Bacteria RepID=C9KKE5_9FIRM Length = 316 Score = 63.6 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 21/119 (17%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVDKSW 65 + DIV +AK GAD + + IT G + V Sbjct: 169 PNVTDIVAMAKAVEAAGADAVSLINTLLGMEIDIHRFRPVLGNITGGLSGPCVKPVAVRM 228 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 V +VA+ + IP GGI S EDA + GA +++ + DP + ++ D Sbjct: 229 VWQVAQAVHIPIIGMGGIASAEDAVEFFLAGASAVAVGTANFTDPEITMKICDGLTDYL 287 Score = 57.4 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 5/83 (6%) Query: 175 VLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + + + +V + H+P+I GG + E +E F A + Sbjct: 211 NITGGLSGPCVKPVAVRMVWQVAQAVHIPIIGMGGIASAEDAVEFF-LAGASAVAVGTAN 269 Query: 235 HKQIINIGEL----KAYLATQGV 253 ++ YLA G Sbjct: 270 FTDPEITMKICDGLTDYLAENGF 292 >UniRef50_Q0STG2 Dihydrouridine synthase family protein n=27 Tax=Clostridiales RepID=Q0STG2_CLOPS Length = 321 Score = 63.6 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 57/175 (32%), Gaps = 10/175 (5%) Query: 81 GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 G I + A K+ G ++I++N + + + F + E K Sbjct: 72 GFILT---AKKLKDLGYNEINLNLGCPSGTVVGKKRGAGF---LAHREELDKFLEEIFKI 125 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREV 199 + + + E + ++ K E++++ + +LE K + Sbjct: 126 NHMKISIKTRLGMDKPEEFYELIKIYNKYPMEELIIHPRTRQDFYGNKPNLEVFKDAISL 185 Query: 200 CHVPLIASGGAGTMEHFLEAFRDAD-VDGALAASVFHKQIINIGELK--AYLATQ 251 P+ +G T+E + + VD + + E+ ++ + Sbjct: 186 SKNPVCYNGDIFTLEDHNKLVEEFKEVDKIMLGRGILANPALMNEILNNEFMDKK 240 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 49/152 (32%), Gaps = 5/152 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVI 73 +K + + L K Y + +EL+ + T G + + Sbjct: 129 KISIKTRLGMDKP--EEFYELIKIYNKYPMEELIIHPRTRQDFYGNKPNLEVFKDAISLS 186 Query: 74 DIPFCVAGGIKSLEDAAKILS--FGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 P C G I +LED K++ DKI + LA+P L+ + + + V+ Sbjct: 187 KNPVCYNGDIFTLEDHNKLVEEFKEVDKIMLGRGILANPALMNEILNNEFMDKKVLKEFH 246 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 + N+ R + + Sbjct: 247 DEIFSKYREVFNEDRNAMFRMKELWGYMIYMF 278 >UniRef50_A5CW14 Indole-3-glycerol phosphate synthase n=3 Tax=Gammaproteobacteria RepID=A5CW14_VESOH Length = 268 Score = 63.6 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 64/224 (28%), Gaps = 35/224 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + V +A+ Y + GA L T + ++ + V E I IP I Sbjct: 78 NPVEIAESYEKSGATCLSVV--TNKDFFQGNNQHLI-DVCEAISIPILHKEFIIDSYQIY 134 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GAD I + + L D + + Sbjct: 135 ESRTLGADCILLIAACLND---------------------------QQIEDFTMQAININ 167 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--GYDLEQLKKVREVCHVPLIASG 208 + + ++ ++ + I +N N +E +K+++E +I Sbjct: 168 MDVLIEIHNIEELERTLQLRLPMIGVNNRNLHTFDVSLETTIELMKEIKE--DTLIITES 225 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 G T ++ L F +Q L+ Sbjct: 226 GILTSNDV-AFMNKHNIYSFLVGEAFMRQDNPGKALQKIFGKNK 268 >UniRef50_C6DGZ6 Indole-3-glycerol-phosphate synthase., Phosphoribosylanthranilate isomerase n=9 Tax=Enterobacteriaceae RepID=C6DGZ6_PECCP Length = 455 Score = 63.6 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 63/226 (27%), Gaps = 33/226 (14%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D V +AK Y + A + G D +++ +V+ + P I S Sbjct: 66 RDDFDPVAIAKVYKDY-ASAISVLTDEKYFQG---DFAFLPQVSAAVHQPVLCKDFIISP 121 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + AD I + L D + ++ Sbjct: 122 YQIYLARYYQADAILLMLSVLDDEQYLQLADVAHSLKLG--------------------- 160 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 +T+ + ++ + A + +N + + + + R V +I+ Sbjct: 161 ------VLTEVSNEEELERAIQLEARVVGINNRDLRDLSIDLNRTRTLSSRLPAGVTVIS 214 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 G E A G L S + G ++ + + Sbjct: 215 ESGINRHAQIREL--SAFAQGFLIGSSLMSEPDLNGAVRRVILGEN 258 >UniRef50_B0SFJ9 Indole-3-glycerol-phosphate synthase n=3 Tax=Leptospira biflexa serovar Patoc RepID=B0SFJ9_LEPBA Length = 258 Score = 63.6 bits (153), Expect = 6e-09, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 64/229 (27%), Gaps = 36/229 (15%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 V +AK Y GA + + G + D VA + +P I Sbjct: 59 LRPDYHPVEIAKLYETSGAGAISVLTDQSYFFGSLNDLE---SVANQVSLPVIRKDFILD 115 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + ++GA I + L + + ++++ Sbjct: 116 PIQIDEAYAYGASAILLIVRIL---------------------------SPSLLKSLHEH 148 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI 205 + + V GA I +N + D + ++++ +I Sbjct: 149 ANRLGLAVLVETHNELEVNLALDAGANTIGINTRDLDTFQ--IHKNLIEEIAPKLDPSII 206 Query: 206 --ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 A G + E + + +D L + F K + + L Sbjct: 207 RVAESGIESYEDWQKYRGM--IDSMLVGTFFMKSKNIQHDFFSLLNGSK 253 >UniRef50_UPI0000D5303F indole-3-glycerol-phosphate synthase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D5303F Length = 418 Score = 63.6 bits (153), Expect = 7e-09, Method: Composition-based stats. Identities = 24/207 (11%), Positives = 51/207 (24%), Gaps = 35/207 (16%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 +A + E GA L G + ++P I + Sbjct: 244 PAKVASDFEEMGATCLSVLTDAKYFKGSGAILEMAK---KGCNLPILRKDFIIDEYQIDE 300 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + GAD I + + AL + + + Sbjct: 301 SVVMGADCILLIAAALEK---------------------------NSLEKLFKEAKQRNL 333 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL--EQLKKVREVCHVPLIASGG 209 + + D ++ + I +N N + E +K +++ +IA G Sbjct: 334 DVIVEVHNHDELENALEIDCDIIGINNRNLHTFEVNLNTTIELVKYIKD--DQLIIAESG 391 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHK 236 + ++ L Sbjct: 392 IHNSNDV-KTMNACGINTFLVGESLMT 417 >UniRef50_B0TFP7 Indole-3-glycerol phosphate synthase n=2 Tax=Heliobacteriaceae RepID=B0TFP7_HELMI Length = 288 Score = 63.2 bits (152), Expect = 7e-09, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 53/218 (24%), Gaps = 25/218 (11%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA RY + GA + +T + E + +P + A+ Sbjct: 87 DLAARYEQAGASAISI--LTEEKYFLGC-LDDLQEAKEQVSLPVMRKDFLIDPYQIAEAR 143 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 GAD + + L L A + + + + Sbjct: 144 LCGADACLLIAAMLGPSRLDEMCAAALEFGIHTLIEVHGEEDLAWAAEAVEKNRAQR--- 200 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL--IASGGAG 211 + +N N ++ D EQ ++ + +A G G Sbjct: 201 --------------PGWLPVVGINARNLATLK--VDKEQALRLGAALPEGVVKVAESGIG 244 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 A A D L L+ + Sbjct: 245 GASDGQRAL-AAGFDAILVGEALVTAADPGKALRDLIG 281 >UniRef50_C5LIP5 Ornithine decarboxylase n=4 Tax=Perkinsus marinus ATCC 50983 RepID=C5LIP5_9ALVE Length = 720 Score = 63.2 bits (152), Expect = 9e-09, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 33/111 (29%), Gaps = 12/111 (10%) Query: 12 VRDGQVVKGVQ-------FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVD-- 62 ++ VK + KR G D + + T G++ Sbjct: 431 IKCPVSVKIRLMTAKDDDGSGRPDVAATKEFVKRLDSLGVDLIALHPRTKEWKGQLTQAC 490 Query: 63 -KSWVSRVAEVID-IPFCVAGGIKSLEDAAKILS-FGADKISINSPALADP 110 + V + IPF V GGI ED K D + + L P Sbjct: 491 WWQAAAEVRACVPDIPFIVNGGISCFEDVEKCFEVTKCDAVMSSECILEVP 541 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 48/180 (26%), Gaps = 11/180 (6%) Query: 74 DIPFCVAGGIKSL-EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI------V 126 + G + +AAK + I +N + Sbjct: 366 PLAAQFCGDDGDVIVEAAKHIEDQVSCIDLNLGCPQGIARRGHYGSFLLEEPELVLRIVE 425 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + + K + D+ R T ++V+ + G I L+ ++ Sbjct: 426 KMVKGIKCPVSVKIRLMTAKDDDGSGRPDVAATKEFVKRLDSLGVDLIALHPRTKEWKGQ 485 Query: 187 GYDLEQLKKVREV----CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + EV +P I +GG E + F D +++ + Sbjct: 486 LTQACWWQAAAEVRACVPDIPFIVNGGISCFEDVEKCFEVTKCDAVMSSECILEVPTLFR 545 >UniRef50_D0N427 N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Phytophthora infestans T30-4 RepID=D0N427_PHYIN Length = 561 Score = 63.2 bits (152), Expect = 9e-09, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 59/229 (25%), Gaps = 42/229 (18%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVID-IPFCV-AGGIKSLEDAAK 91 + YA GA + G + D V E + P + I + + Sbjct: 84 EQVQAYANAGASMISVLTEPKWFKGSLDDMRAAREVVEGMSQRPAILRKDFIIDVYQLLE 143 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 ++GAD + + L+ LI + + + Sbjct: 144 ARAYGADCVLLIVALLSQEQLIELIDATHNLGMCALV----------------------- 180 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC----------H 201 + ++ + A I +N + + D+ +V + Sbjct: 181 ----EVNSIQELDIALAARARLIGVNNRDLRTFK--VDMNTTARVADAIRERGLSLGRDG 234 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 V L A G + ++ G L K +K L Sbjct: 235 VTLFALSGIRSHADVVKY-EKCGARGILVGEYLMKSGDIAATVKDLLQN 282 >UniRef50_A4AAB0 tRNA-dihydrouridine synthase C n=6 Tax=Gammaproteobacteria RepID=A4AAB0_9GAMM Length = 328 Score = 62.8 bits (151), Expect = 9e-09, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 6/186 (3%) Query: 73 IDIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + + + GG S E+A++ GA + +N A + + V Sbjct: 69 VPVYLQILGGDPSVVAENASRAAELGAPGVDLNFGCPAKTVNRSDGGSIILREPERVHRI 128 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD- 189 + V + R E+V++ + Sbjct: 129 VAATRQALPPSVPLSVKIRLGFDSSDRFLDIVSGIDAARP-SELVIHARTRADGYRPPAY 187 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 E + R +PLIA+G + A + + + L+A Sbjct: 188 WEHIALARSKTRLPLIANGEIWGVGDAKLAREKSGTRDLMLGRGVLCRPDLPRLLRAA-- 245 Query: 250 TQGVEI 255 GVE+ Sbjct: 246 DSGVEV 251 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 39/164 (23%), Gaps = 4/164 (2%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK + + + ELV + T + R ++ Sbjct: 141 PLSVKIRLGFDSSD--RFLDIVSGIDAARPSELVIHARTRADGYRPPAYWEHIALARSKT 198 Query: 74 DIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +P G I + DA G + + L P L L + Sbjct: 199 RLPLIANGEIWGVGDAKLAREKSGTRDLMLGRGVLCRPDLPRLLRAADSGVEVDALTWHE 258 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 KY ++R V + A + + Sbjct: 259 IRGYLLKYLAITLESYDARYAVNPIKQWLGYLRHYYPQAAAMFV 302 >UniRef50_A6DU09 Dihydrouridine synthase family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DU09_9BACT Length = 334 Score = 62.8 bits (151), Expect = 9e-09, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 6/98 (6%) Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVRE-----VCHVPL 204 RT +T +T +W+ + + I+L+ Q G +++ K H+P Sbjct: 157 RTGITAHKTEEWMTHLLEVEPAAIILHGRTQKQQSEGLASWDEIAKGARVRDRLKPHIPF 216 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 +G ++E + ++ +DGA+ Sbjct: 217 WGNGDVRSIEQAHQLCQEHKLDGAMIGRGVFHNPWIFN 254 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 38/144 (26%), Gaps = 10/144 (6%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVS---R 68 + VK + + E A ++ + T ++ R Sbjct: 149 KLPVSVKTRTGITAHKTEE--WMTHLLEVEPA-AIILHGRTQKQQSEGLASWDEIAKGAR 205 Query: 69 VAEVID--IPFCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRLADRFGVQCI 125 V + + IPF G ++S+E A + D I +P + V Sbjct: 206 VRDRLKPHIPFWGNGDVRSIEQAHQLCQEHKLDGAMIGRGVFHNPWIFNTDLLGDNVLPP 265 Query: 126 VVGIDTWYDAETGKYHVNQYTGDE 149 I + + + Sbjct: 266 EEKIALLWRHASLYTSFWGSQKNF 289 >UniRef50_UPI0001B4BBA7 anthranilate phosphoribotransferase n=1 Tax=Streptomyces lividans TK24 RepID=UPI0001B4BBA7 Length = 510 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 25/226 (11%), Positives = 49/226 (21%), Gaps = 35/226 (15%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 LA+ Y GA + A G + ++P + Sbjct: 318 LTDDYRPAELARAYQGGGAHAVSVLTHEAGFGGSPDHLAVARA---ACELPVLRKDFVVD 374 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + + G + + A + Sbjct: 375 EYQILEARALG---------------------------ADALLLIVAALAPARLAALLAR 407 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV--P 203 T + + V + GA I +N + D ++R Sbjct: 408 TRACGMEALVEVHDEREVDVALEAGADVIGVNHRDLRDF--SIDRTLSARLRGRVGTGRV 465 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 ++ G A A VD L + + +K + Sbjct: 466 MVGESGVRGAPDA-RALEAAGVDAVLVGELLMRAGDPGTTIKGLVG 510 >UniRef50_B5H1G9 Indole-3-glycerol-phosphate synthase n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5H1G9_STRCL Length = 243 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 29/231 (12%), Positives = 55/231 (23%), Gaps = 30/231 (12%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 R+ LA Y + GA L G + VA+ D+P Sbjct: 38 GRDLFAGRSAARLATAYRDAGAPCLSVVTG-HWFGGTP---ELLREVADHTDLPLLHKDF 93 Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + + + GA + + + L TL + G+ T + H Sbjct: 94 LTRRSQLDESRAAGASAVLLTAALLPRSTLGGLVEHALGLGLTPFVEVTREAEISRVPHA 153 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV 202 + + + + G L V++ Sbjct: 154 EECAIAVNNKD----------------------ITARERGAGDLGRSYALLPAVQDSGTR 191 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ---IINIGELKAYLAT 250 +++ G E R+ G L + + L Sbjct: 192 CPVSASGIHRPEAAARLLRE-GFAGVLVGTGLLSTESLPEWLAAFDRQLEG 241 >UniRef50_UPI0000586CAD PREDICTED: similar to Dus1l protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000586CAD Length = 291 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 16/46 (34%) Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +P+ A+G +++ + VDG + A Sbjct: 2 KAAVKIPVFANGNIQSLQDVHRCMEETGVDGVMTAEGNLHNPALFE 47 >UniRef50_A0LJ58 Indole-3-glycerol phosphate synthase n=2 Tax=Deltaproteobacteria RepID=TRPC_SYNFM Length = 265 Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 55/222 (24%), Gaps = 34/222 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D A+RY GA + G+ D + + IP I S Sbjct: 74 DAAQFARRYESCGAAAVSVLTDAGFFHGKAGD---LRSARAAVKIPVLRKDFIVSRYQIF 130 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GAD + + + + Sbjct: 131 ESAVMGADAVLLI---------------------------VRAISPELLGECLRLCRRIG 163 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL-IASGG 209 + + + + + + GA I +N + ++ VR + + ++ G Sbjct: 164 LDALVEVHSAEELDAASEAGAVLIGMNNRDLSTFTTDIRTS-IQLVRRMRPGQVAVSESG 222 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 E DA + L + A+L Sbjct: 223 IRCREQIDRLL-DAGIWNFLIGESLVTAPE-PEAVLAHLFGA 262 >UniRef50_C0W3B1 Indole-3-glycerol-phosphate synthase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3B1_9ACTO Length = 274 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 64/210 (30%), Gaps = 36/210 (17%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 +GD+ LA+ Y GA + S+G + D V +D+P V I + Sbjct: 70 VGDVAVLARFYEAGGAACVSVVTEPVYSNGDLRDLDAVR---GAVDVPVLVNDLIVTPYQ 126 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + + GAD + + + T Sbjct: 127 VHEARAHGAD----------------------------LLKLDARLDPLILESLIERTAS 158 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL--IA 206 V + + + GA + ++ + D + D + ++V EV + +A Sbjct: 159 LGMLAVVEAHSRREAITAVENGARCVAVDARDPDTL--EVDPSRFEQVAEVLPTSVLRVA 216 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHK 236 GG ++ R A D L + Sbjct: 217 EGGVSGARDVMDYAR-AGADVVLVGEALIR 245 >UniRef50_C3K307 Indole-3-glycerol phosphate synthase n=120 Tax=cellular organisms RepID=TRPC_PSEFS Length = 278 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 61/226 (26%), Gaps = 31/226 (13%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 +AK Y + GA L +T + D ++ + +P + + Sbjct: 78 PEDIAKSYEKGGATCLSV--LTDIDYFQGSDL-FLQQARAACKLPVIRKDFMVDPYQIVE 134 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + GAD + + AL D ++A+ V V + + T D Sbjct: 135 ARALGADCVLLIVSALDD----VKMAELAAVAKSVGLDVLVEVHDGDELERALKTLDTPL 190 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 V + ++ + ++ +I G Sbjct: 191 VGVNNRNLHTFEVSLENT-LDLLPRIPRDRL---------------------VITESGIV 228 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA-TQGVEIR 256 E + V L F + EL+ +GV + Sbjct: 229 NRADV-ELMEISGVYSFLVGETFMRAENPGAELQRLFFPERGVAVS 273 >UniRef50_Q8TXM0 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Methanopyrus kandleri RepID=GGGPS_METKA Length = 239 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 60/222 (27%), Gaps = 10/222 (4%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 ++ + + + G D ++ TA + + VA D+P + E Sbjct: 26 EEVPEVLESLVKAGTDAVMVGGSTAHASQVEAVVEAIREVA---DVPVIL--FPNGPEGL 80 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 A +NS + + I T Y GD Sbjct: 81 APNADAVLFMSLLNSRNTYYLIEAQVKGAPLVERFGLESIPTGYLIVGEWGTTVSVVGDA 140 Query: 150 SRTRVTQWETLDWVQEVQKR-GAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASG 208 + E + K G + L + E +++V V I G Sbjct: 141 RVIPFDRVEVIVAYALAAKHLGMKAVYLEAGSGAPEPVPP--EVVRRV-SGIGVFTIVGG 197 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G + E E +A D + + + E+ + Sbjct: 198 GIRSPETARE-LAEAGADAIVTGTAVERDPDLAAEIVEAIKD 238 >UniRef50_Q6R3G3 Conserved protein n=1 Tax=Methylomonas sp. LW13 RepID=Q6R3G3_9GAMM Length = 227 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 65/262 (24%), Gaps = 53/262 (20%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAK--------------RYAEEGADELVF 49 +IIP +D++DG VV V + Sbjct: 1 MQIIPVIDLKDGLVVYAAGGDRSRY--QPVHYTSSICESSEISNVVTSLLKLYPFPKFYI 58 Query: 50 YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKI---SINSPA 106 D+ + G+ + + + + L G+ N + Sbjct: 59 ADLD-AIGGQGNHDEAIDNL-------------FRQYPNKEFWLDKGSSYQALTMTNRAS 104 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 P + T I + + T Sbjct: 105 NCKPVIGTESQRLPISLKNTDLILSLDFKHNQVLGHPGWLDSPELWPETNV--------- 155 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADV 225 + ++ G G D +L ++ + +A+GG ++ + + + Sbjct: 156 ---------VMTLDLVGSNQGPDFAKLSRLCQDHPDKHFVAAGGVRNVKDLMR-LKTIGI 205 Query: 226 DGALAASVFHKQIINIGELKAY 247 L AS H I+ L+ + Sbjct: 206 TAVLLASALHNGSIDAAMLEKF 227 >UniRef50_Q06053 tRNA-dihydrouridine synthase 3 n=11 Tax=Saccharomycetaceae RepID=DUS3_YEAST Length = 668 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 30/277 (10%), Positives = 64/277 (23%), Gaps = 46/277 (16%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGAD------ELVFYDITASSDGRVVDK 63 LD+ ++V +G+ +P + + GAD L G + Sbjct: 289 LDLYHKKIVS-----PLTTVGN-LPYRRLMRKLGADVTYSEMALAV----PLIQGTNSEW 338 Query: 64 SWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFG----ADKISINSPALADPTLITRLAD 118 + VA A +I++NS D Sbjct: 339 ALPKAHTSEFPGFGVQVACSKAWQAAKAAEALANSVSEISEINLNSGCPIDLLYRQGSGS 398 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + K + V + I L+ Sbjct: 399 ALLDNPARMIRCLNAMNYVSKDIPITVKIRTGTKEGHPIAEGLVKRLVNETDVAAITLHG 458 Query: 179 MNQDGVRN-GYDLEQLKKVREVCH---------------------VPLIASGGAGTMEHF 216 ++ D + + +V + + + +G E + Sbjct: 459 RSRQQRYTKSADWDYVSQVADTLRSAEADFIETEQGKEGRDSKNRIQFVGNGDVNNFEDW 518 Query: 217 LEAFR-DADVDGALAASVFHKQIINIGEL--KAYLAT 250 + ++D + A + E+ + YL Sbjct: 519 YRYLNGNENIDSVMVARGALIKPWIFEEVESQQYLDK 555 >UniRef50_Q6GH35 Indole-3-glycerol phosphate synthase n=53 Tax=Staphylococcus aureus RepID=TRPC_STAAR Length = 260 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 22/198 (11%), Positives = 48/198 (24%), Gaps = 31/198 (15%) Query: 39 YAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD 98 Y + GA+ + G + + +P I GA Sbjct: 76 YEQYGANAVSILTDEKYFGGS---FERLQALTTKTTLPVLCKDFIIDPLQIDVAKQAGAS 132 Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 I + L+D L + Y ++ + + Sbjct: 133 MILLIVNILSDKQL---------------------------KDLYNYAISQNLEVLVEVH 165 Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 ++ K A I +N + + + + I+ G + + Sbjct: 166 DRHELERAYKVNAKLIGVNNRDLKRFVTNVEHTNTILENKKPNHYYISESGIHDVSDVRK 225 Query: 219 AFRDADVDGALAASVFHK 236 + +DG L + Sbjct: 226 IL-HSGIDGLLIGEALMR 242 >UniRef50_B5YJH1 Dihydroorotate dehydrogenase n=24 Tax=Bacteria RepID=PYRD_THEYD Length = 303 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 26/128 (20%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD------------------IT 53 ++ +VK + +I +A+ EEGAD + + +T Sbjct: 158 IKKPLIVKL-----APQVTEIALMARICEEEGADAVSLINTIPAMVIDIKTRKSMIGTLT 212 Query: 54 ASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 G R V V VA+ + IP GGI S EDA + L GA I + + +P Sbjct: 213 GGLSGPAIRPVALRAVWEVAQAVKIPVIGVGGIVSAEDALQFLIAGAKAIQVGTANFINP 272 Query: 111 TLITRLAD 118 + + Sbjct: 273 IATVEIIE 280 Score = 57.0 bits (136), Expect = 7e-07, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 5/82 (6%) Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 L L + +V + +P+I GG + E L+ A + Sbjct: 211 LTGGLSGPAIRPVALRAVWEVAQAVKIPVIGVGGIVSAEDALQFL-IAGAKAIQVGTANF 269 Query: 236 KQII----NIGELKAYLATQGV 253 I I +K +L + + Sbjct: 270 INPIATVEIIEGIKQFLIEENI 291 >UniRef50_C7LZ72 Indole-3-glycerol-phosphate synthase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZ72_ACIFD Length = 271 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 63/231 (27%), Gaps = 37/231 (16%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + E D+ Y GA + T G + D R A+ +++P Sbjct: 62 KGWFVEPETDVATRVSAYERAGAVAVSVLTDTPHFGGTLADLE---RAAQHVELPIVRKD 118 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I + + GA + + + AL + + V V+ Sbjct: 119 FIVDARELLRARRAGASAVLLIAAALQPEEVASLAGVAHDVGLEVLL------------- 165 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV-- 199 + L ++ + A + +N + R D ++ ++V Sbjct: 166 --------------EIHELSELELAELAAADVVGVNQRDLTSFR--VDTDRARRVLAALP 209 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +A G + DG L + ++A + Sbjct: 210 PGAARLAESGVRGPDDLAGLV---GFDGVLIGEACMRARDPYATVRALVER 257 >UniRef50_A4XLM6 Indole-3-glycerol phosphate synthase n=2 Tax=Clostridia RepID=A4XLM6_CALS8 Length = 260 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 35/216 (16%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 +AK Y G + G D V V +P I + + Sbjct: 78 IAKLYESLGFFAISVLTEKNFFKGSEQDLMDVRSV---TSLPVLRKDFIIDIWQLYQTKM 134 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 GAD + + AL + L + + + Sbjct: 135 IGADAALLITKALGNKQLSIFIKVLEILDI---------------------------VPL 167 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC--HVPLIASGGAGT 212 + E +++ GA I +N N + + D+ + +++ + V +I+ G + Sbjct: 168 VEVENEYEIEKALNCGAKLIGINNRNLNDLT--IDIRKTERLLKYIPKDVVVISESGIKS 225 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 E F E R VDG L + F K + + + Sbjct: 226 REDF-EYIRSLGVDGCLIGTSFMKTQNPVEIIGERI 260 >UniRef50_Q6K306 cDNA clone:001-026-D08, full insert sequence n=14 Tax=Poaceae RepID=Q6K306_ORYSJ Length = 385 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 54/203 (26%), Gaps = 34/203 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + V +A+ Y + GA L G + V + P + + Sbjct: 182 NPVEIAQSYEKNGAACLSILTDEKHFQGSFENLETVRN--SGVKCPLLCKEFVIDIWQIY 239 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 S GAD I + + L D + L + + Sbjct: 240 YARSKGADAILLIAAVLPDLDIKYMLRICKNLGMTALIEVH------------------- 280 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL-----KKVREVCHVPLI 205 + + + ++ G I +N + + + + + + ++ Sbjct: 281 -------DERELDRVLKIDGVQLIGINNRSLETFKVDTSNTKTLLEKRGDLIRDKGILVV 333 Query: 206 ASGGAGTMEHFLEAFRDADVDGA 228 G T + ++A V Sbjct: 334 GESGLFTPDDV-AYVQNAGVSAV 355 >UniRef50_O74731 tRNA-dihydrouridine synthase 2 n=2 Tax=Schizosaccharomyces RepID=DUS2_SCHPO Length = 479 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 46/154 (29%), Gaps = 4/154 (2%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +AAK+++ I +N ++ + + Sbjct: 98 EAAKLVANDVAGIDLNCGCPKHFSVHAGMGAGLLKNQDRLVSILDALVNEIGKPYKISIS 157 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD----LEQLKKVREVCHVP 203 + R T+ +TL V+ + G I ++ L ++ V V Sbjct: 158 CKIRLLETKEDTLKLVERICDTGVRAITVHCRTTPMRNTEPADRSYLSEIVGVCRNKDVS 217 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 ++ +G + L+ VDG L A + Sbjct: 218 ILVNGDVLSYNDGLDVIEKYGVDGVLIARAAERN 251 Score = 47.4 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 8/95 (8%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG-RVVDKSWVSRV---AE 71 K E D + L +R + G + + T D+S++S + Sbjct: 156 ISCKIRL---LETKEDTLKLVERICDTGVRAITVHCRTTPMRNTEPADRSYLSEIVGVCR 212 Query: 72 VIDIPFCVAGGIKSLEDAAKILS-FGADKISINSP 105 D+ V G + S D ++ +G D + I Sbjct: 213 NKDVSILVNGDVLSYNDGLDVIEKYGVDGVLIARA 247 >UniRef50_A6TM74 Indole-3-glycerol phosphate synthase n=6 Tax=Clostridia RepID=TRPC_ALKMQ Length = 261 Score = 61.7 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 17/228 (7%), Positives = 62/228 (27%), Gaps = 36/228 (15%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + + + V +A Y + D + G ++ + ++ IP Sbjct: 62 KGIIKKDF-NPVKIAAEYEKNRVDAISVLTEDQFFLGDNR---YLQDIRKMTTIPLLRKD 117 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 + + + G + + + Sbjct: 118 FMIDAYQIYQSKALG---------------------------ADAILLIAAALTKKEMIA 150 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH 201 + + + + + ++ + + GA I +N + L++ ++ Sbjct: 151 FQKIAAEIGIYSLVEVHNKEELEMILETGAEIIGINNRDLKTFDT--TLDRTAELLPFIP 208 Query: 202 VP--LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAY 247 +++ G T + ++ ++ ++ L + +L+ Sbjct: 209 KDKIVVSESGIKTNQD-MKLLKNYGINAVLMGEGLMRADSIGEKLREL 255 >UniRef50_B7J4N8 tRNA-dihydrouridine synthase A n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J4N8_ACIF2 Length = 330 Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 20/194 (10%), Positives = 53/194 (27%), Gaps = 15/194 (7%) Query: 71 EVIDIPFCVAGGIKSLEDA--AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 + + G A ++G D +++N + +V Sbjct: 70 AEHPLILQLGGDDPHAMHAAGRMARAYGYDGLNLNVGCPSPRVQKGSFGACLMTTPDLVA 129 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 V+ +V+ V G +++ N Sbjct: 130 ELVA-AMGESGLPVSVKHRLGLDREEDYAALRAFVETVATAGCRHFIVHARNAWLKGLSP 188 Query: 189 D---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 + + +++ ++ H+ + +GG + F VDG + + Sbjct: 189 AENRDVPPLRWDWVHQLKRDLPHLTIEINGGFNDLAAVTAQFSA--VDGVMLGRAAYHHP 246 Query: 239 INIGELKAYLATQG 252 + + E++ L + Sbjct: 247 LLLAEIERALGRRE 260 Score = 42.0 bits (97), Expect = 0.019, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 35/152 (23%), Gaps = 12/152 (7%) Query: 15 GQVVKGVQF-RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKS 64 VK E + + A G + + A G + Sbjct: 141 PVSVKHRLGLDREEDYAALRAFVETVATAGCRHFIVHARNAWLKGLSPAENRDVPPLRWD 200 Query: 65 WVSRVAEVIDIPFC-VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 WV ++ + + GG L S D + + A P L+ + G + Sbjct: 201 WVHQLKRDLPHLTIEINGGFNDLAAVTAQFSA-VDGVMLGRAAYHHPLLLAEIERALGRR 259 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVT 155 + + R Sbjct: 260 ETLPEPEVILSGLIAYAERWGEWLPAPRLSRH 291 >UniRef50_A9BJH4 Dihydroorotate dehydrogenase n=45 Tax=Bacteria RepID=PYRD_PETMO Length = 300 Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 26/127 (20%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD------------------ITA 54 + +VK +IV +A+ E GAD L + ITA Sbjct: 158 QKPLIVKL-----SPSAENIVEMAESCVEAGADALSLVNTFPALAIDISKKKAIFDNITA 212 Query: 55 SSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 G + + V V++ +D+P GGI DA + + GA + + + +P Sbjct: 213 GLSGPCIKPIALRMVYEVSKAVDVPIIGIGGIMDYRDAIEYIMAGAWAVQVGTANFINPN 272 Query: 112 LITRLAD 118 + + Sbjct: 273 ACAEIIE 279 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 5/83 (6%) Query: 175 VLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + L + +V + VP+I GG +E A + Sbjct: 209 NITAGLSGPCIKPIALRMVYEVSKAVDVPIIGIGGIMDYRDAIEYIM-AGAWAVQVGTAN 267 Query: 235 HKQI----INIGELKAYLATQGV 253 I ++ YL +G+ Sbjct: 268 FINPNACAEIIEGIEEYLQKEGI 290 >UniRef50_A4IM35 Dihydroorotate dehydrogenase n=348 Tax=Bacteria RepID=PYRD_GEOTN Length = 313 Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 26/153 (16%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD------------------ITASSDG- 58 VK + DIV +AK + GAD L + T G Sbjct: 164 VKL-----SPNVTDIVAMAKAIEQAGADGLTMINTLVGMRIDVKTGRPILANGTGGLSGP 218 Query: 59 --RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + + + V++ + IP GG+++ ED + GA +++ + DP + + Sbjct: 219 AVKPIAVRMIYEVSQAVSIPIIGMGGVQTAEDVLEFFYAGASAVAVGTANFIDPFVCPTI 278 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 + V +GI + + + Sbjct: 279 INELPVLLDELGIRHISECTGRSWKTGAHAVHC 311 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 1/63 (1%) Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 + + +V + +P+I GG T E LE F A + + Sbjct: 221 KPIAVRMIYEVSQAVSIPIIGMGGVQTAEDVLEFF-YAGASAVAVGTANFIDPFVCPTII 279 Query: 246 AYL 248 L Sbjct: 280 NEL 282 >UniRef50_Q26BH5 Indole-3-glycerol phosphate synthase, IGPS n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26BH5_9BACT Length = 267 Score = 61.3 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 58/218 (26%), Gaps = 29/218 (13%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 + K Y GA + G + D + + ++IP I L + Sbjct: 73 DVVKGYETAGASAISCLTDQPFFGGTLQD---LLEARKAVNIPILRKDFIIDLYQIHEAK 129 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 ++GAD I + + L + L T + + ++ + V Sbjct: 130 AYGADAILLIAACLNNEELKTLSLEAMNLGLEILFEVHELEELNRIKTVTTSFNTSK--- 186 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL--IASGGAG 211 I +N + + K + + I+ G Sbjct: 187 ------------------FIIGVNNRDLKRFKTDIQNS--KDLLPHFPECVLAISESGIS 226 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 E E +D G L F + + ++ Sbjct: 227 DPETVKE-LKDLGFQGFLIGENFMRTNDPGTSCQQFIK 263 >UniRef50_A5KQG7 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQG7_9FIRM Length = 651 Score = 61.3 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 41/140 (29%), Gaps = 2/140 (1%) Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + P +I + + ++ + + + + + + + V Sbjct: 190 IKFPMMIVDRVRQAVGRDYMLDMRISGEEHIEGGMEIDEVAEFIKRIEDKIDMVHISCGV 249 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + +I ++ + + + K V+E +P+ GG T E E D D Sbjct: 250 EIDNRTKIYMSPTAYAPHK--INAKMAKLVKEKVKIPVAVVGGIMTPEEAEEILEDGCAD 307 Query: 227 GALAASVFHKQIINIGELKA 246 + + + Sbjct: 308 AVVIGRQLIADPWWVKKAWE 327 Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 48/163 (29%), Gaps = 25/163 (15%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD------ITA 54 ML RI G+ I ++ KR ++ D + T Sbjct: 209 MLDMRI-------SGE----EHIEGGMEIDEVAEFIKRIEDK-IDMVHISCGVEIDNRTK 256 Query: 55 SSDG------RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPAL 107 ++ V E + IP V GGI + E+A +IL G AD + I + Sbjct: 257 IYMSPTAYAPHKINAKMAKLVKEKVKIPVAVVGGIMTPEEAEEILEDGCADAVVIGRQLI 316 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 ADP + + + + + Sbjct: 317 ADPWWVKKAWEGRSEDIVPCIRCMNCYNPYQYKTEEERRKHVG 359 >UniRef50_P24920 N-(5'-phospho-ribosyl)anthranilate isomerase n=1 Tax=Phytophthora parasitica RepID=TRPC_PHYPR Length = 531 Score = 61.3 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 60/234 (25%), Gaps = 42/234 (17%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVID-IPFCV-AGGIKSL 86 + + YA GA + G + D V E + P + I + Sbjct: 49 LNAPAEQVQAYANAGASMISVLTEPKWFKGSLDDMMEAREVVEGMSQRPAILRKDFIIDV 108 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + ++GAD + + L+ LI + + + Sbjct: 109 YQLLEARAYGADCVLLIVTLLSKEQLIELIDATHNLGMCALV------------------ 150 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC------ 200 + ++ + A I +N + + D+ +V + Sbjct: 151 ---------EVNSVQELDIALAAKARLIGVNNRDLRTFK--VDMNTTARVADAIRERGLS 199 Query: 201 ----HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 V L A G + ++ G L K +K L Sbjct: 200 LGRDGVALFALSGIRSHTDVVKY-EKCGARGILVGEYLMKSGDIATTVKDLLQN 252 >UniRef50_C1I8I7 N-acetylmannosamine-6-phosphate 2-epimerase n=7 Tax=Firmicutes RepID=C1I8I7_9CLOT Length = 232 Score = 61.3 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 28/262 (10%), Positives = 72/262 (27%), Gaps = 41/262 (15%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHE-IIGD----IVPLAKRYAEEGADELVFYD-ITA 54 M + I+ + + G +V + I + + +A+ + GA + Sbjct: 1 MRKEEIMEKI--KGGLIVSCQALPDEPLYIEEDSMMPL-MARAAKKAGACAIRTNGVRDV 57 Query: 55 SSDGRVVDKSWVSRVAE--VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + + + + + P+ ++++ + GAD I+ + Sbjct: 58 IGIKKETNLPVIGLIKKSYEGFEPYIT----FTMDEIDSLAKAGADIIAFDCTLRKRKDG 113 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG 172 T ++ + + L+ + G Sbjct: 114 RT----------------------VEEFIKAIKEKYPNILLMADISNLEEGINAFRAGVD 151 Query: 173 EIVLN---MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 + + +G D E +K + E +P+IA G +E F D + Sbjct: 152 MVGTTLSGYTSYTPKLDGPDYELVKNLVESIDIPVIAEGRIHYPSQAVEMF-DLGAYAVV 210 Query: 230 AASVFHKQIINIGELKAYLATQ 251 + + + + Sbjct: 211 VGGAITRPLEITTRFMEAIKKR 232 >UniRef50_Q0SMC0 Histidine phosphokinase/phophatase, putative n=16 Tax=Borrelia burgdorferi group RepID=Q0SMC0_BORAP Length = 334 Score = 61.3 bits (147), Expect = 3e-08, Method: Composition-based stats. Identities = 22/216 (10%), Positives = 58/216 (26%), Gaps = 15/216 (6%) Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVA--GGIKSLEDAAKILS----FGADKISINSPAL 107 +G + ++ P G + E K + G I IN Sbjct: 51 GILNGSKQSIQHILLKPNELNRPLIAQIWGNV--PEQFYKAIEILGSMGFWGIDINMGCP 108 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + + + + ++ N ++R + E +W+ + Sbjct: 109 KNKIIKKGVCSALINNKSL-AKEIILASKEACAKFNLPLSVKTRHGFSYPEIDNWLGFLL 167 Query: 168 KRGAGEIVLNMMNQDGVRNGY-DLEQLKKVRE-----VCHVPLIASGGAGTMEHFLEAFR 221 G + + G D + ++ + +I +G +++ Sbjct: 168 GFGIDMLTVYPRLAVNQSKGPVDFDIFYELVKLRNNISPSTLIIGNGDVWSLKDARYYVD 227 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 +DG + K + + + R+ Sbjct: 228 KYLIDGIMFGRGIFKNLNLFKFSSKHFLDNNLNFRL 263 >UniRef50_A3ZZD2 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase related protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZD2_9PLAN Length = 244 Score = 61.3 bits (147), Expect = 4e-08, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 75/257 (29%), Gaps = 35/257 (13%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEI---------IGDIVPLAKR------YAEEGADE 46 + I+P +D++D VV+GV +A + + Sbjct: 1 MPPVILPVIDLKDRHVVRGVGGLRRRYRPIESKLCASSKPGDVAAAMVTAYSFEDA---- 56 Query: 47 LVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 D+ A DGR + W ++AE + + G+ +L D +++ A + + Sbjct: 57 -YVADLDAILDGRPQVEDW-RKIAEA-GLRLHLDAGLATLADCQRVIEVLARENVASVIV 113 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 + ++ + + R + Q Sbjct: 114 GLETLRRWEDLEQIAAEFGDDVTFSLDLRHGRPL----------RIVGAAIRPEEVAQRA 163 Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKK--VREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + G IVL + G G E L + ++ V I GG T Sbjct: 164 FECGVRRIVLLDLAHIGQGRGTGTEMLCRELSTQLAGVEWITGGGMQTSADIAAQL-AIG 222 Query: 225 VDGALAASVFHKQIINI 241 L +S H+ + Sbjct: 223 ASRVLVSSALHEDEKIL 239 Score = 44.7 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 7/111 (6%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSW 65 + LD+R G+ ++ V +A+R E G +V D+ GR Sbjct: 135 VTFSLDLRHGRPLRIVG-----AAIRPEEVAQRAFECGVRRIVLLDLAHIGQGRGTGTEM 189 Query: 66 VSR--VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 + R ++ + + GG+++ D A L+ GA ++ ++S D ++ Sbjct: 190 LCRELSTQLAGVEWITGGGMQTSADIAAQLAIGASRVLVSSALHEDEKILM 240 >UniRef50_P40545 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=25 Tax=Dikarya RepID=HIS4_YEAST Length = 261 Score = 60.9 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 69/243 (28%), Gaps = 27/243 (11%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVP-----------LAKRYAEEGADELVF 49 M I C+D+ +G+V + V D+ AK Y + Sbjct: 1 MTKF--IGCIDLHNGEVKQIVGGTLTSKKEDVPKTNFVSQHPSSYYAKLYKDRDVQGCHV 58 Query: 50 YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALAD 109 + + + V GGI + + L + A K+ + S Sbjct: 59 IKL------GPNNDDAAREALQESPQFLQVGGGIND-TNCLEWLKW-ASKVIVTSWLFTK 110 Query: 110 PTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR 169 + + +T E ++ Sbjct: 111 EGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRK 170 Query: 170 GAGEIVLNMMNQDGVRNGYDLEQLKKV----REVCHVPLIASGGAGTMEHFL--EAFRDA 223 E +++ + +G+ G D + K+ ++ + ++ +GGA +++ + Sbjct: 171 YTNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHG 230 Query: 224 DVD 226 VD Sbjct: 231 KVD 233 >UniRef50_C5CIM1 N-acylglucosamine-6-phosphate 2-epimerase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIM1_KOSOT Length = 239 Score = 60.9 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 79/254 (31%), Gaps = 51/254 (20%) Query: 12 VRDGQVVKGVQFRNHEIIGD--IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 ++ G +V F + GD +V +A GA + T + ++ Sbjct: 9 LKSGLIVSCQAFEGEPLYGDGIMVRMANAAVIGGAKAI----RTNG-------VKDIKQI 57 Query: 70 AEVIDIPFCVAGGIK-------------SLEDAAKILSFGADKISINSPALADPTLITRL 116 E +D+P GI + ++A ++L GAD ++++ P + + Sbjct: 58 KEALDVPVI---GIIKKHIEGYSVYITPTSKEALEVLEAGADIVALDCTKRPRPEPLKDI 114 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + I V+Q + D T ++ + Sbjct: 115 FENIRSNYPNALIMADIATVEDAEFVSQLSPDFLATTLSGYTKET--------------- 159 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 R D+E +K + E +P+IA G LEA + A S + Sbjct: 160 ------RNRPKPDIELVKILAERFSIPVIAEGNYWEPSQVLEAMK-AGAFAVTIGSAITR 212 Query: 237 QIINIGELKAYLAT 250 + ++ Sbjct: 213 PHLVTARFNKFIQN 226 >UniRef50_C5DS92 ZYRO0B14872p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DS92_ZYGRO Length = 406 Score = 60.9 bits (146), Expect = 4e-08, Method: Composition-based stats. Identities = 16/160 (10%), Positives = 44/160 (27%), Gaps = 9/160 (5%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 AA+++ D + +N + +++ Sbjct: 94 QAARLVQDKCDAVDLNLGCPQGIAKKGHYGSFLMEE----WDLVHKLIRNLHENLDVPVT 149 Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG---YDLEQLKKVREV--CHV 202 + R + ++L + + V GA + ++ ++ D E +K +R+ Sbjct: 150 AKIRIFPEKEKSLQYARTVLDAGAQFLTVHGRLREQKGQQSGLADWETIKYLRDNLPPDT 209 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 ++G + D ++A Sbjct: 210 VFFSNGNLLYPNDISRCMDQINCDAVMSAEGNLYNPGIFN 249 Score = 51.3 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 16/143 (11%), Positives = 35/143 (24%), Gaps = 11/143 (7%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---RVVDKSWV 66 LDV K F + A+ + GA L + G + D + Sbjct: 144 LDV--PVTAKIRIF---PEKEKSLQYARTVLDAGAQFLTVHGRLREQKGQQSGLADWETI 198 Query: 67 SRVAEVIDIPFCV--AGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQ 123 + + + G + D ++ + D + L +P + + + Sbjct: 199 KYLRDNLPPDTVFFSNGNLLYPNDISRCMDQINCDAVMSAEGNLYNPGIFNAEDSQDKEK 258 Query: 124 CIVVGIDTWYDAETGKYHVNQYT 146 + Sbjct: 259 VFPRVDVICREYFEIVKSYEFSH 281 >UniRef50_Q12ZK1 Indole-3-glycerol phosphate synthase n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12ZK1_METBU Length = 271 Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 48/225 (21%), Gaps = 27/225 (12%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 + +A GA + +G + + + V E I +P I Sbjct: 68 DISPEEAGKIAMDMENAGAIAISVLTEPEFFEGSIDN---LKAVREAISLPVLRKDFIID 124 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + I A + L + + ++ E N Sbjct: 125 KVQFDE-----VRSDLILLIAGLLGEKLEELIEYARSKEFEPLVEVHNKEELTYVLENSS 179 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI 205 + ++ + + +I Sbjct: 180 AKIVGINNRDLTTLEVDIATTEELIPIIKKYDRRTGEEHL------------------VI 221 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + G T E R A D L + K + K + Sbjct: 222 SESGVHTPEDARRMMR-AGADAILIGTSIVKDEDIYRKTKELVDA 265 >UniRef50_Q0CZL3 tRNA-dihydrouridine synthase 3 n=19 Tax=Leotiomyceta RepID=DUS3_ASPTN Length = 719 Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 12/112 (10%), Positives = 29/112 (25%), Gaps = 29/112 (25%) Query: 168 KRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH------------------------- 201 G I L+ ++ D + + + Sbjct: 496 PCGTAAITLHGRSRQQRYTKQADWGYIAETAALIKNLNKRKDELTDTIYEPDERMLPNGG 555 Query: 202 -VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK--AYLAT 250 V + +G + + + + +A VD + + E++ YL Sbjct: 556 KVYFLGNGDCFSHQDYDDHINNAGVDSVMIGRGALIKPWLFEEIQTGQYLDK 607 >UniRef50_Q54QJ2 tRNA-dihydrouridine synthase 2-like protein n=1 Tax=Dictyostelium discoideum RepID=Q54QJ2_DICDI Length = 402 Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 3/99 (3%) Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCH--VPL 204 + R T ET+D ++ ++ G I ++ + R+ ++L+ + VP+ Sbjct: 174 CKIRLLSTDQETIDLLRIIESTGVSAIGVHCRMIPERPRDPAHWDRLENILSNASFSVPI 233 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 IA+G + + VD + A K + + Sbjct: 234 IANGDIFEHADIEKIKKQTKVDSIMIARGVVKNVSIFSK 272 Score = 45.9 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 16/80 (20%), Gaps = 6/80 (7%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEV- 72 K + + L + G + + + + Sbjct: 171 PITCKIRL---LSTDQETIDLLRIIESTGVSAIGVHCRMIPERPRDPAHWDRLENILSNA 227 Query: 73 -IDIPFCVAGGIKSLEDAAK 91 +P G I D K Sbjct: 228 SFSVPIIANGDIFEHADIEK 247 >UniRef50_C3Q9B4 Dihydrouridine synthase n=18 Tax=Bacteroidales RepID=C3Q9B4_9BACE Length = 315 Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 43/168 (25%), Gaps = 8/168 (4%) Query: 85 SLEDAAKIL----SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKY 140 S E A KIL G ++ IN V + Sbjct: 72 SFEKAEKILSLLIEKGYKEVDINMGCPFPMLAKRHNGSGILPYPEEVQALLSWLITEYPQ 131 Query: 141 HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREV 199 E L + + ++V++ G DL+ + + V Sbjct: 132 ISFSIKMRLGW--EDPEECLKLAPIINELPLRQVVMHPRLGKQQYKGEVDLKAFEAFQGV 189 Query: 200 CHVPLIASGGAGTMEHFLEAFRD-ADVDGALAASVFHKQIINIGELKA 246 C PLI +G ++E + G + E + Sbjct: 190 CKHPLIYNGDINSVEDIHRIQEQFPGLAGMMIGRGLLANPALALEYRQ 237 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 5/130 (3%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVID 74 +K E + + LA E ++V + + VD V Sbjct: 134 FSIKMRLGW--EDPEECLKLAPIINELPLRQVVMHPRLGKQQYKGEVDLKAFEAFQGVCK 191 Query: 75 IPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 P G I S+ED +I G + I LA+P L ++ + Sbjct: 192 HPLIYNGDINSVEDIHRIQEQFPGLAGMMIGRGLLANPALALEYRQNRALEFDEMREKLQ 251 Query: 133 YDAETGKYHV 142 + Sbjct: 252 SMHKCVYNQY 261 >UniRef50_A7AWB5 Dihydrouridine synthase (Dus) domain containing protein n=1 Tax=Babesia bovis RepID=A7AWB5_BABBO Length = 362 Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 20/182 (10%), Positives = 49/182 (26%), Gaps = 14/182 (7%) Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGA---DKISINSPALADPTLITRLADRFGVQCIV 126 A I + G A ++ G + + + Sbjct: 70 ANEHPIVLQLGGNNLDSLSKAGNIALGYGYTEFNLNVGCPSTRVSGKGCFGAALMNDAPL 129 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 VG + V + D++ V +G + +++ Sbjct: 130 VGRIVKHLRSELGTPVTVKHRLGVDHNDSYEFVRDFISTVADQGCTDFIVHARKAWLNGI 189 Query: 187 GY---------DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 D E++ ++ E ++ + +GG ++E A V G + + ++ Sbjct: 190 NPRKNRSIPPLDHERVYRLCQEFPNLNISINGGIKSLEEIKYALSR-GVYGVMVGRMAYE 248 Query: 237 QI 238 Sbjct: 249 NP 250 Score = 48.2 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 11/127 (8%) Query: 15 GQVVKGVQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDG---------RVVDKS 64 VK +H + V A++G + + + A +G +D Sbjct: 144 PVTVKHRLGVDHNDSYEFVRDFISTVADQGCTDFIVHARKAWLNGINPRKNRSIPPLDHE 203 Query: 65 WVSRVAEVIDIPFC-VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 V R+ + + GGIKSLE+ LS G + + A +P + R+ + Sbjct: 204 RVYRLCQEFPNLNISINGGIKSLEEIKYALSRGVYGVMVGRMAYENPCGLVRVDTDIYGE 263 Query: 124 CIVVGID 130 Sbjct: 264 ATNPATC 270 >UniRef50_Q1QMJ9 Indole-3-glycerol phosphate synthase n=82 Tax=Bacteria RepID=TRPC_NITHX Length = 281 Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 29/226 (12%), Positives = 52/226 (23%), Gaps = 39/226 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D LA+ Y GA L T S G ++ +P + Sbjct: 75 DPPSLARAYEAGGAACLSVLTDTPSFQG---HLDFMVAARTATSLPVLRKDFMFDTYQVV 131 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GAD + I + + D Sbjct: 132 EARAHGAD---------------------------CILIIMAALDDAAAKDIEAAALDLG 164 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP----LIA 206 + + + K + I +N N + + H+P ++ Sbjct: 165 MDALLEIHNRAELDRALKLRSPMIGVNNRNLRTFETTLETSE----ALAPHIPKDRVMVG 220 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 G + L +Q +A LA G Sbjct: 221 ESGIFAAADLAR-LEQVGISTFLVGESLMRQADVTAATRALLARGG 265 >UniRef50_B3QW78 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW78_CHLT3 Length = 256 Score = 60.1 bits (144), Expect = 6e-08, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 64/228 (28%), Gaps = 22/228 (9%) Query: 19 KGVQFRNHEIIGDI--------VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVA 70 K + ++ D + K GAD + S ++V ++ Sbjct: 15 KARKGAGFLLLIDPDKYDASGLEQVVKNATAFGADGFLIGG---SLLFSNRFDAYVQQIK 71 Query: 71 EVIDIPFCVAGG----IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 D+P + G I DA LS +S +P +T Sbjct: 72 SATDLPVILFPGHSVQISPSADAILFLSL----LSGRNPEFLIGHHVTAAPSIKAFGLES 127 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + K V + E R + G I L + Sbjct: 128 MPTAYLLVESGRKTAVEFMSNTEPIPRHKPELAAVHALAAEYLGMKMIYLEAGSGAD--E 185 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 E ++ V + +P+I GG + + + + DA + + F Sbjct: 186 SVPEEMVELVCQTVSLPVIVGGGIRSAQ-AVRSKVDAGASFVVVGNAF 232 >UniRef50_B2RZT4 NIFR3-like protein n=23 Tax=Borrelia RepID=B2RZT4_BORHD Length = 335 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 21/200 (10%), Positives = 53/200 (26%), Gaps = 22/200 (11%) Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 A +IL + N + + + + A Sbjct: 64 QIATSCENDAAKAIEILENKFNFDEYNLNVGCPSSKVQNANYGACLMQTPTQVGKILKAM 123 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV--------LNMMNQDGV-RNG 187 + R + E + ++ +I+ ++ + Sbjct: 124 KKNTNKPVSIKHRIGIRNNKREYHEENYTELQQFVEKIMEYEIKNFTVHARIAILNGYSP 183 Query: 188 YDLEQLKKVR---------EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI 238 D + + K+R E ++ + +GG + +H VD + K Sbjct: 184 KDNQNIPKLRHDFVYRLKQEHKNIFIEVNGGIKSSDHIKTHLSY--VDSVMIGRAVAKDP 241 Query: 239 INIGEL-KAYLAT-QGVEIR 256 I ++ + +L + + R Sbjct: 242 YLIAKISREFLEEKEKIPTR 261 >UniRef50_Q468H4 NADH peroxidase n=5 Tax=cellular organisms RepID=Q468H4_METBF Length = 365 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 13/119 (10%) Query: 28 IIGDIVPLAKRYAEEGADELVFYDITASSDG------------RVVDKSWVSRVAEVIDI 75 I V +AK + G + + G + + ++I Sbjct: 235 DIFQAVEIAKLLEKAGVCAIEVSGGIGEAGGVTIRTAINTPAKEAYFRDCSKAIKSAVNI 294 Query: 76 PFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 P + GGI+SL +L G AD IS++ +++P ++ + + V + + Sbjct: 295 PVILVGGIRSLSVINDLLENGSADMISMSRAFISEPDIVLKFKSGKVKKARCVSCNLCF 353 Score = 50.5 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 12/92 (13%) Query: 166 VQKRGAGEIVLNMMNQDGVR------------NGYDLEQLKKVREVCHVPLIASGGAGTM 213 ++K G I ++ + Y + K ++ ++P+I GG ++ Sbjct: 246 LEKAGVCAIEVSGGIGEAGGVTIRTAINTPAKEAYFRDCSKAIKSAVNIPVILVGGIRSL 305 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELK 245 + + D + F + + + K Sbjct: 306 SVINDLLENGSADMISMSRAFISEPDIVLKFK 337 >UniRef50_B6JXZ5 Anthranilate synthase component 2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JXZ5_SCHJY Length = 747 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 53/214 (24%), Gaps = 30/214 (14%) Query: 43 GADELVFYDITASSDGRVVDKSWVSR-VAEVIDIPFCV-AGGIKSLEDAAKILSFGADKI 100 GA + G + D + V+ + + P + I + GAD + Sbjct: 329 GASVISVLTEPHWFKGSLSDMELARKSVSHLSNRPAILRKDFIFDPYQIMEARLHGADTV 388 Query: 101 SINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL 160 + L+ + + Y+ + + Sbjct: 389 LLIVAMLS---------------------------QGQLESLYSYSKSLGMEPLVEVNCR 421 Query: 161 DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + ++ K GA I +N N + + V L A G + + + Sbjct: 422 EEMEIALKLGAKAIGVNNRNLHTFQVDLNNTSSMASMVPEDVVLCALSGISSAKDVEKYV 481 Query: 221 RDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 V L + K + + Sbjct: 482 EQ-GVSAVLVGESLMRASDVNSFAKELVGLPNLP 514 >UniRef50_O31546 Probable tRNA-dihydrouridine synthase 2 n=107 Tax=Bacteria RepID=DUS2_BACSU Length = 325 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 10/97 (10%), Positives = 30/97 (30%), Gaps = 6/97 (6%) Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVRE-----VCHVPLIA 206 E +W+ + K+ + +++ + + E + ++++ L Sbjct: 148 YTDVDEWREWLTHILKQDIANLSIHLRTRAEMSKVDAHWELIPEIKKLRDEVAPDTLLTI 207 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +G + L+ VDG + + Sbjct: 208 NGDIPDRQTGLKLAEQYGVDGIMIGRGIFTNPFAFEK 244 >UniRef50_C4FAV3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAV3_9ACTN Length = 649 Score = 60.1 bits (144), Expect = 7e-08, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 35/132 (26%), Gaps = 10/132 (7%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVID 74 + D++ +++R + G D + T G + + + + Sbjct: 231 DGGLTLNDMIYVSRRLEKAGVDMIHVSGGTTIKRGSAIPAAGTKQASHADLSREIKKHVT 290 Query: 75 IPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G I A +++ G AD + L D + A + Sbjct: 291 IPVATVGRINEAWIAEELIEDGAADICMMGRANLCDAEFCNKAAAGRAEEVRPCIGCLRC 350 Query: 134 DAETGKYHVNQY 145 Sbjct: 351 LNGIMFGKPISC 362 Score = 39.7 bits (91), Expect = 0.092, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 33/111 (29%), Gaps = 12/111 (10%) Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMN---------QDGVRNGYDLEQLKKVREVCHVPLI 205 T + + + ++K G I ++ G + + +++++ +P+ Sbjct: 235 TLNDMIYVSRRLEKAGVDMIHVSGGTTIKRGSAIPAAGTKQASHADLSREIKKHVTIPVA 294 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 G E D D + + A + E+R Sbjct: 295 TVGRINEAWIAEELIEDGAADICMMGRANLCDAEFCNKAAA---GRAEEVR 342 >UniRef50_A8MDA4 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=GGGPS_CALMQ Length = 267 Score = 60.1 bits (144), Expect = 8e-08, Method: Composition-based stats. Identities = 27/232 (11%), Positives = 68/232 (29%), Gaps = 7/232 (3%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK 84 + + + LAK + G+D L+ ++G + + ++ V + + +P + G Sbjct: 25 DKVTMDKFIELAKGAEKAGSDALMIGGSYGVNEGTLDN--YIDAVKQEVKLPIILFPGSV 82 Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + ++ P + + I Y V Sbjct: 83 AGLSRRADAVLFLSVLNSTDPYYIIGAQVQAAVLMAKHYSNLESIPMAYIIVGEGGAVGF 142 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 + + + + + G I L + R + KV+ + Sbjct: 143 ASYAKPIPFHMEDVIVAYALAAYYMGFSAIYLEAGSGA--REPVPSSVVAKVKRAVRNKI 200 Query: 205 -IASGGAGTMEHFLEAFRDADVDGALAASVFHKQII-NIGELKAYLATQGVE 254 + GG + E + A D + +V + + ++ + G+ Sbjct: 201 LMVGGGIKSPE-AAYSIALAGADVIITGTVIEESPAVVLKDIVDAVHRGGLR 251 >UniRef50_Q6C002 YALI0F29205p n=1 Tax=Yarrowia lipolytica RepID=Q6C002_YARLI Length = 394 Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 59/202 (29%), Gaps = 9/202 (4%) Query: 50 YDITASSDGRVVD--KSWVSRVAEVIDIPFCVAGGIKSLE---DAAKILSFGADKISINS 104 D T S G+ K+ + R +E G + E A K+++ I +N Sbjct: 57 VDFTVSQQGKGNTEKKAIIFRTSEAERDKIIFQVGSANPEIAVAACKMVAKDVAGIDLNC 116 Query: 105 PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQ 164 ++ + + + N + R T+ +TL+ V Sbjct: 117 GCPKHFSMHAGMGAALLKTPDKLVAILEALVKEVGEPFNVSISVKIRLLETEEKTLELVD 176 Query: 165 EVQKRGAGEIVLNMMNQDGVRNGY----DLEQLKKVREVCHVPLIASGGAGTMEHFLEAF 220 + + G + ++ L ++ +V + + +G + Sbjct: 177 RLAQTGVKNLTIHCRTTPMRPREPVIRDTLAKVAEVCHKHGITCLVNGDVEGRHELADLQ 236 Query: 221 RDADVDGALAASVFHKQIINIG 242 +DGA+ A Sbjct: 237 EKYGIDGAMIARAAEANASCFR 258 Score = 47.4 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 38/135 (28%), Gaps = 8/135 (5%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV----DKSWVSRVAE 71 VK E + L R A+ G L + T R + V+ V Sbjct: 158 ISVKIRL---LETEEKTLELVDRLAQTGVKNLTIHCRTTPMRPREPVIRDTLAKVAEVCH 214 Query: 72 VIDIPFCVAGGIK-SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 I V G ++ E A +G D I A A+ + Q +D Sbjct: 215 KHGITCLVNGDVEGRHELADLQEKYGIDGAMIARAAEANASCFRAEGMLPWQQVTKEYLD 274 Query: 131 TWYDAETGKYHVNQY 145 + + + Sbjct: 275 ICREYDNFYQNTKYC 289 >UniRef50_Q12ZA4 Putative uncharacterized protein n=5 Tax=Euryarchaeota RepID=Q12ZA4_METBU Length = 429 Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 5/126 (3%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE 71 +++ VV V+ ++ D + LA+ GAD L A +G D + R+ + Sbjct: 201 IKETGVVLSVK-VRANVVDD-IALARSIENAGADILHV---DAMKEGAGADLRAILRIRD 255 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + I + DA + S GAD IS++ L D I L + +G Sbjct: 256 STRLLLIGNNSIMDIMDARDMFSKGADMISVSRVVLEDDGFIDSLVEDVCAVQEQMGWYN 315 Query: 132 WYDAET 137 Sbjct: 316 SPKHVC 321 >UniRef50_B7KHK1 Indole-3-glycerol-phosphate synthase n=5 Tax=Cyanobacteria RepID=B7KHK1_CYAP7 Length = 288 Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats. Identities = 26/210 (12%), Positives = 55/210 (26%), Gaps = 25/210 (11%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A+ Y A L G + +V + + +P I Sbjct: 88 DPVKIAQAYQLSNAACLSVLTDEKFFCGS---FDNLFKVRQAVSLPLLCKEFIIDPIQIT 144 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 GAD + + + L+D L +F + I +++ Sbjct: 145 LARLKGADAVLLIAAILSDQDL------QFFLNLIQSLGMEALIEVHTALELDRVLKLSG 198 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 + V ++ +N ++ + + +++ G Sbjct: 199 IRLLGINNRNLEDFSVDLNTTDQL-INRRRKEI--------------KNLGITVVSESGL 243 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIIN 240 T + + D L KQ Sbjct: 244 YTKTDLDFVLK-SGADAVLIGESLVKQTDI 272 >UniRef50_B7APJ6 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APJ6_9BACE Length = 265 Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 51/197 (25%), Gaps = 35/197 (17%) Query: 42 EGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKIS 101 GA + +T + +++ + + + IP I + GAD I Sbjct: 85 AGASAIS--CLTEEHYFQGSS-EYLADIRKNVSIPLLRKDFIIDDYQIYEARVLGADAIL 141 Query: 102 INSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLD 161 + + L D + G+ + + Sbjct: 142 LIAAVLND---------------------------NELEAYYRLAGELRLDVLAEAHDEK 174 Query: 162 WVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP--LIASGGAGTMEHFLEA 219 V+ + G I +N N LE K++ ++ G A Sbjct: 175 EVKRLVNIGFDIIGINNRNLKTF--EVSLENTKRLSSFIPETTVMVCESGIKNNADMHYA 232 Query: 220 FRDADVDGALAASVFHK 236 + + D L + Sbjct: 233 -KASGADAVLVGETLMR 248 >UniRef50_B3T8W2 Putative indole-3-glycerol phosphate synthase n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6C9 RepID=B3T8W2_9ARCH Length = 270 Score = 59.7 bits (143), Expect = 9e-08, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 54/218 (24%), Gaps = 16/218 (7%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 + + D V +AK G L DG + ++ + + IP + Sbjct: 58 GKIKKYS-DPVQIAKSMMSGGTKALSILTQPYLFDGSP---DYFIKIRKNVKIPLLMKDI 113 Query: 83 IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 I + GAD + L D + + + + E Sbjct: 114 IIDKIQIDAAKNMGADYFLLIQA-LFDKGFVDDIDE---LIRYGHRNGLKILLEAHTKTE 169 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHV 202 + V E+ ++ N + + K+ Sbjct: 170 FENALKTRADIVGINNRNLNTLEINLDTTRNLLHNYRRRWRSKKMPFEPVYGKM------ 223 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 +++ G + + + D L + K Sbjct: 224 -IVSESGIKSTNDI-DFLHNCGADAFLIGTSIMKNPDI 259 >UniRef50_O28668 Anthranilate phosphoribosyltransferase n=4 Tax=Euryarchaeota RepID=TRPCD_ARCFU Length = 546 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 73/223 (32%), Gaps = 37/223 (16%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 I + + Y + GA + + ITA + + ++ + D+P I+ ++ + Sbjct: 41 IEDILRAYEKAGAAAISY--ITAEQFSG--NFETLKKIVGLTDLPVLRKDFIRGRKEVER 96 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 A + + + L + + + Sbjct: 97 TAEVEAAALLLIARHLK----------------------------ERTAEMVDFCFEHGI 128 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVREVCHVPLIASGGA 210 + + + + + A +++N + D + R+G ++ K+ E ++ G Sbjct: 129 EPLVEVHHAEDLVYAEN--ARAVLINNRDIDRMERDGGSIDVTAKIAEKIRAFKVSGSGI 186 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 G++E L + VD AL + F ++ + + Sbjct: 187 GSVEDLLFVLQY--VDAALIGTAFMMAENTEEFVQTVCGGEKM 227 >UniRef50_UPI000186E4C9 tRNA-dihydrouridine synthase, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E4C9 Length = 622 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 22/218 (10%), Positives = 57/218 (26%), Gaps = 13/218 (5%) Query: 37 KRYAEEGADEL---VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG---GIKSLEDAA 90 + E GAD + + + R + G I + Sbjct: 292 RICKEFGADVTCSETVVA-NSILQSQPFEWLLTKRHETEELFGIQLFGNNPFIMTRCGQL 350 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 D I I + D + R + ++T + + Sbjct: 351 LEEKTNVDFIDICIGSPNDTMVRPRGTTSQVRR--EKVVETIVRCLSRVSSLPLTVTTRL 408 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC-HVPLIASGG 209 + + ++ + + + N++ D + + + + V + Sbjct: 409 GDYSDEKISNKFLPNYKSCEISLLTVQGRNRET--KQMDWKYVNDLAQKVSPVKVYGLSD 466 Query: 210 AGTMEHFLEAFRDA-DVDGALAASVFHKQIINIGELKA 246 + +L+ + ++ G L + + ELK Sbjct: 467 VFSYTDYLDIQENYPNLSGVLLSRGALVKPWIFSELKE 504 >UniRef50_D1B5R0 Dihydrouridine synthase DuS n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5R0_THEAS Length = 318 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 55/212 (25%), Gaps = 9/212 (4%) Query: 43 GADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG--GIKSLEDAAKILSFGAD 98 G + + + + + + G G LE A L Sbjct: 39 GVSLVHTEMVSALGLKYRGEKSRRILIPLPGEEPVIPQLFGPSGEDLLEGARIALGEYPF 98 Query: 99 KISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWE 158 + + A P ++++ + ++ + + V Sbjct: 99 RAVEVNMACPMPKVVSKGSGAAMLKDPDLAARAVALLKGLGVSVWVKARVLPGGFEETLR 158 Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 + E G ++L+ G D+EQ+ ++ ++ SG + + L Sbjct: 159 FCGRLFEA---GLDLLLLHGRTSPQRYEGRADVEQVIRLSRAFPGRVVGSGDVFSPDDAL 215 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLA 249 L A F + + L Sbjct: 216 RYLE-GGCVAVLLARGFVRDPLLALRCARRLG 246 Score = 50.5 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDIPFCVAGGIKSLED 88 + + R E G D L+ + T+ D V R++ +G + S +D Sbjct: 154 EETLRFCGRLFEAGLDLLLLHGRTSPQRYEGRADVEQVIRLSRAFPGRVVGSGDVFSPDD 213 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 A + L G + + + DP L R A R G++ Sbjct: 214 ALRYLEGGCVAVLLARGFVRDPLLALRCARRLGLRPP 250 >UniRef50_Q09E70 Thiazole biosynthesis protein ThiG n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09E70_STIAU Length = 274 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 1/82 (1%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 +++ G + + R D + L++V + +P+I GG G+ +A Sbjct: 171 LERMGCCALRIMAAPVASGRGLVDPKSLRQVLDAVSIPVIVEGGLGSPAQVAQAME-LGA 229 Query: 226 DGALAASVFHKQIINIGELKAY 247 D L + + + +A Sbjct: 230 DAVLVNTAVAQAPDPVRMAEAM 251 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 35/89 (39%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + +A+ G L +S +VD + +V + + IP V GG+ S A+ Sbjct: 165 IQVARELERMGCCALRIMAAPVASGRGLVDPKSLRQVLDAVSIPVIVEGGLGSPAQVAQA 224 Query: 93 LSFGADKISINSPALADPTLITRLADRFG 121 + GAD + +N+ P + Sbjct: 225 MELGADAVLVNTAVAQAPDPVRMAEAMKH 253 >UniRef50_C9SVF6 tRNA-dihydrouridine synthase n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SVF6_VERA1 Length = 325 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 5/98 (5%) Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREV--CHVPL 204 R T+ TL + V + GA + ++ ++ D ++ +R+ L Sbjct: 95 IRILDTREATLAYALNVLRAGASILTVHGRRREQKGHLTGLADWSTIRWLRDQLPPETVL 154 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 A+G + D ++A Sbjct: 155 FANGNILEHGDLAKCLEATGADAVMSAEGNLSDPGLFA 192 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 6/95 (6%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR---VVDKSWVSRVAEVID--IP 76 + R + + A GA L + G + D S + + + + Sbjct: 94 KIRILDTREATLAYALNVLRAGASILTVHGRRREQKGHLTGLADWSTIRWLRDQLPPETV 153 Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADP 110 G I D AK L GAD + L+DP Sbjct: 154 LFANGNILEHGDLAKCLEATGADAVMSAEGNLSDP 188 >UniRef50_Q88WI2 Indole-3-glycerol phosphate synthase n=3 Tax=Lactobacillus plantarum RepID=TRPC_LACPL Length = 260 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 27/211 (12%), Positives = 55/211 (26%), Gaps = 35/211 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D + +A+ Y G D + G S++ + + + +P I + A Sbjct: 69 DYLQIAQDYVAAGIDAISVLTEPRYFKG---QLSYLQAITQTVSVPTLRKDFIVAASQIA 125 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 GA + + L L + + + Sbjct: 126 SARIAGASAVLLIVAILTPVQLQAFITLAHELNLSALV---------------------- 163 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCH--VPLIASG 208 + T ++ GA I +N N + ++R+ ++A Sbjct: 164 -----EVHTTAESKQAVAAGARIIGINNRNLKDF--SVNFATSCQLRQAVPAECYVVAES 216 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQII 239 G T + A D L + Sbjct: 217 GIQTAT-QAQQLAAAGFDAMLVGETLMRAPD 246 >UniRef50_C6NVP5 tRNA-dihydrouridine synthase A n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVP5_9GAMM Length = 335 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 24/218 (11%), Positives = 65/218 (29%), Gaps = 19/218 (8%) Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL----SFGADKISINSPALA 108 T++ + +++ A + + G E A+ +G +++N + Sbjct: 50 TSALVLGKSPERYLAFTAAEQPLVLQLGGD--DPEAMARAAILARDYGYTGVNLNVGCPS 107 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + + + V+ + + D+V +V Sbjct: 108 TRVQRGNFGACLMLTPAL-VREIIDALAGSGLPVSVKHRLGLDRQEDYGQLADFVAQVAA 166 Query: 169 RGAGEIVLNMMNQDGVRNGYD---------LEQLKKVRE-VCHVPLIASGGAGTMEHFLE 218 V++ N + + +++E + +GG T+ Sbjct: 167 GSCRHFVVHARNAWLRGLSPAANRTIPPLRWDWVARLKEDFPGLRFELNGGLDTVPKVEA 226 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + + VDG + + + + + EL+ L + R Sbjct: 227 --QWSRVDGVMIGRAAYHRPLFLTELELALGRRQAPAR 262 >UniRef50_B1L6Q8 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=GGGPS_KORCO Length = 244 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 61/220 (27%), Gaps = 9/220 (4%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 LA+ +E GAD + + + V + +IP + G Sbjct: 31 KLARAASEGGADLIFVGGSIGAGFRIN---EIILSVKKESNIPIILFPGNVDGVSPYADA 87 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 ++ +P + + + R Sbjct: 88 ILFMSLLNSTNPYWIIQAQALAAIPIRRMGLEAIPTAYLIVEPGQRSAAGWVGSVNPIPR 147 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 L + + G I L + E ++ VRE ++ +I GG + Sbjct: 148 DKPEIALAYATAAEMLGMRWIYLEAGSGAE--APVPSEMVRLVRERTNLGIIVGGGLRSP 205 Query: 214 EHFLEAFRDADVDGALAASVFHKQII---NIGELKAYLAT 250 E + +A + + + + ++ E+K L + Sbjct: 206 E-LVRERAEAGANVIVVGTHIEEGRDALASVREMKEALKS 244 Score = 45.9 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 2/66 (3%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + A G + + + V V E ++ V GG++S E + Sbjct: 153 ALAYATAAEMLGMRWIYLEAGSGAEAPVPS--EMVRLVRERTNLGIIVGGGLRSPELVRE 210 Query: 92 ILSFGA 97 GA Sbjct: 211 RAEAGA 216 >UniRef50_UPI0001BC2F14 dihydrouridine synthase DuS n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F14 Length = 305 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 57/196 (29%), Gaps = 5/196 (2%) Query: 53 TASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 + + + + + + +D IP + + A L + L P+ Sbjct: 37 SRKLNSKEKN-DVLPEHNQNMDVIPQILTNKSEEFCYIASRLKEYY-GYEEVNLNLGCPS 94 Query: 112 LITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 +R V + E + + + ++ + Sbjct: 95 GTVVAKNRGSGFLAVPDELNRFFEEVFSMTDVRISVKTRTGVENNENWENILKIYNEYPI 154 Query: 172 GEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRD-ADVDGAL 229 E++++ + G +LE KK + L +G ++E + ++ VD + Sbjct: 155 SELIIHPRCRKDGYGGKPNLEDFKKAVLISRHSLCYNGDINSVEDYNAITKEFPTVDKIM 214 Query: 230 AASVFHKQIINIGELK 245 E+K Sbjct: 215 CGRGILMNPGLFSEIK 230 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 37/115 (32%), Gaps = 7/115 (6%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDK 63 + DVR VK E + + K Y E EL+ + G + Sbjct: 119 EVFSMTDVR--ISVKTRTGV--ENNENWENILKIYNEYPISELIIHPRCRKDGYGGKPNL 174 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRL 116 + + C G I S+ED I DKI L +P L + + Sbjct: 175 EDFKKAVLISRHSLCYNGDINSVEDYNAITKEFPTVDKIMCGRGILMNPGLFSEI 229 >UniRef50_C7N9A2 Indole-3-glycerol-phosphate synthase n=2 Tax=Leptotrichia RepID=C7N9A2_LEPBD Length = 241 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 65/212 (30%), Gaps = 27/212 (12%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVID-IPFCVAGGIKS 85 + D++ A+ Y ++G +T + + ++ V + IP I + Sbjct: 54 KDDFDLLKQAQSYVDKGVSAFSI--LTEKEYFKGEN-DFIKIVRQKFPEIPILRKDFIYT 110 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 A GA I + L D TL+ + + + +D E + + Sbjct: 111 PFQVAHAKFLGASAILLIVRMLDDKTLLE--LHKLAQDLEMDVLVETHDEEEIRRALKIP 168 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI 205 + T +++ + + N + L ++ ++ Sbjct: 169 NLEILGINNRNLNT--------------FEVDIRTTEKLINEIPSDVLN------NLTIV 208 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 + G + E A +VDG L K Sbjct: 209 SESGFLSKEDVEYA-EKLNVDGLLIGEALMKG 239 >UniRef50_A4XZC5 Indole-3-glycerol phosphate synthase n=168 Tax=cellular organisms RepID=TRPC_PSEMY Length = 279 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 26/227 (11%), Positives = 57/227 (25%), Gaps = 33/227 (14%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 +A+ Y GA L +T + D ++ + +P + + Sbjct: 78 PADIARSYEAGGATCLSV--LTDIDFFQGAD-EYLQQARAACALPVIRKDFMVDPYQIVE 134 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + GAD + + L D R+A+ V V + + T D Sbjct: 135 ARALGADCVLLIVSCLDD----VRMAELAAVAKDVGLDVLVEVHDGNELERALNTLDTPL 190 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAG 211 + + ++ + + ++ G Sbjct: 191 VGINNRNLHTFEVSLETT-LDLLPRIPRERL---------------------VVTESGIL 228 Query: 212 TMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL---ATQGVEI 255 E ++V L F + EL+ + + Sbjct: 229 NRADV-ELMEISEVYAFLVGEAFMRAESPGAELQRLFFPERGRPTVV 274 >UniRef50_C7JI48 Enoyl[acyl-carrier-protein (ACP)] reductase n=8 Tax=Acetobacter pasteurianus RepID=C7JI48_ACEP3 Length = 364 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 26/229 (11%), Positives = 57/229 (24%), Gaps = 39/229 (17%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSW-VSRVAEVIDIPFCVAGGIKS----- 85 + + G F + + + ++ F V I Sbjct: 26 TAEMVVAASNAG-----FLGSLGAGMMSPEEMEASLRQIKSETTAAFNVNLFIIDHLPDY 80 Query: 86 ---------LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 L + + L + P+ + + V + Sbjct: 81 QLDAEDILFLRNIYEKLELDFILPDKYA-----PSFQEQFEVLLHAKPPVASFTFGILTQ 135 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ---- 192 ++ T T E W + GA + + G R + + Sbjct: 136 EQVSKLHDQGILVCGTATTSAEARAW----AEVGADAVCAQGIEAGGHRGSFLSDGGNGV 191 Query: 193 -----LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 ++++ + +P+IA+GG E + A D + F Sbjct: 192 GLLPLVREIVKDISIPVIAAGGIMDGEGIVAAI-SLGADAVQMGTAFLG 239 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 11/84 (13%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVDK----------SWVSRVAEVIDIPFCVAGGIKS 85 A+ +AE GAD + I + R V + + I IP AGGI Sbjct: 158 ARAWAEVGADAVCAQGIE-AGGHRGSFLSDGGNGVGLLPLVREIVKDISIPVIAAGGIMD 216 Query: 86 LEDAAKILSFGADKISINSPALAD 109 E +S GAD + + + L Sbjct: 217 GEGIVAAISLGADAVQMGTAFLGC 240 >UniRef50_D1APV9 Indole-3-glycerol-phosphate synthase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1APV9_SEBTE Length = 244 Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 53/216 (24%), Gaps = 31/216 (14%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + + DI Y + G+ D ++ ++ IP Sbjct: 50 KGTIAKDTFDIEKQLDYYVKNNIAAFSILTENHFFKGQNEDLTFAGKLHPE--IPVLRKD 107 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 I A+ GA + + L+D LI ++ V+ + Sbjct: 108 FIFDPFQVAQAKFIGASAVLLIVKMLSDIELINLHKLALDLELEVLVEIHNEEDLERALR 167 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--YDLEQLKKVREV 199 + + + +N N D K+ Sbjct: 168 IPE--------------------------IKLLGINNRNLDTFETSLSVTENLFPKIPAG 201 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + +I+ G T E + VDG L Sbjct: 202 KDITIISESGVHTQEDL-KFLESIGVDGVLIGESLM 236 >UniRef50_A9W195 Dihydrouridine synthase DuS n=41 Tax=Bacteria RepID=A9W195_METEP Length = 354 Score = 59.0 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 22/174 (12%), Positives = 49/174 (28%), Gaps = 14/174 (8%) Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 FG +I++N +D R + +VG V + Sbjct: 105 DFGYAEINLNVGCPSDRVQDGRFGACLMREPGLVGACVAALKAAVPVPVTVKCRLGVDDQ 164 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY---------DLEQLKKVREV-CHVP 203 + V G +V++ D ++ +++ +P Sbjct: 165 DIEEALDAVADAVVAAGGDGLVVHARKAWLKGLSPRENRDVPPLDYGRVARLKRAHPDLP 224 Query: 204 LIASGGAGTMEHFLEAFRDAD-VDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + +GG A VDG + + + + ++ A L + + Sbjct: 225 IAVNGGI---ADIAAAKARLGEVDGVMIGRAAYTEPALLLDVDAELFGEPAPVA 275 >UniRef50_B8HZU1 Photosystem I assembly BtpA n=5 Tax=Clostridiales RepID=B8HZU1_CLOCE Length = 262 Score = 59.0 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 30/246 (12%), Positives = 73/246 (29%), Gaps = 27/246 (10%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVF---------YDITASSDGRVVDKSWVSRVAEVI 73 +I V A + G D ++ ++ + S + VA+ + Sbjct: 29 GDMKKITDQAVKEAITLEKSGMDAIIIENMGDNVFGVNMDIEQSCALAAISAI--VAQNV 86 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 +IP + + + A I + + + + + Sbjct: 87 NIPIGIDAAMNDYKTALSIAKAIGADFVRIPVFVDTVEFFGGIIQPCAREAMKFRKNIEA 146 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL 193 + + V+ ++ + + GA I++ + + ++ + Sbjct: 147 ENVKIFADIQVKHTHMVLPHVSIEDS---AKAAEACGADAIIVTGTH---IGVETPIDII 200 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDAD-VDGALAASVF-----HKQIINIGELKAY 247 K+V++V +P+IA G T DGA+ S K I++ Sbjct: 201 KRVKKVISIPVIAGSGVKT----NNIKEQLGIADGAIVGSSLKEGGNIKNPISLELCTEL 256 Query: 248 LATQGV 253 + + Sbjct: 257 IKALNI 262 >UniRef50_UPI000180C428 PREDICTED: similar to tRNA-dihydrouridine synthase 2-like (hDUS2) (Up-regulated in lung cancer) (URLC8) n=1 Tax=Ciona intestinalis RepID=UPI000180C428 Length = 482 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 26/82 (31%), Gaps = 4/82 (4%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCHVPLIASGG---AGTMEHFLEAFR 221 ++ G + ++ + + +K + E +P+IA+GG + + Sbjct: 218 IESTGVAALAVHGRYKHERPRHPVHCDVIKAITETVKIPVIANGGSSNIACYDDIEKFRA 277 Query: 222 DADVDGALAASVFHKQIINIGE 243 + + A + Sbjct: 278 STNASSVMLARSAQWNCSVFRK 299 Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 36/148 (24%), Gaps = 8/148 (5%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVI 73 K I + L + G L + R V + + E + Sbjct: 197 PVTCKIRI---LPEIDKTLELVRIIESTGVAALAVHGRYKHERPRHPVHCDVIKAITETV 253 Query: 74 DIPFCVAGG---IKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGI 129 IP GG I +D K + A + + A + ++ + I I Sbjct: 254 KIPVIANGGSSNIACYDDIEKFRASTNASSVMLARSAQWNCSVFRKEGPLPLDVVIKDYI 313 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQW 157 + + + Sbjct: 314 KIAIQYDNHYINCKFCILEMMHETQETE 341 >UniRef50_C6XGY7 tRNA-dihydrouridine synthase A n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGY7_LIBAP Length = 322 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 59/185 (31%), Gaps = 13/185 (7%) Query: 77 FCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 I L +AAKI+ G ++I++N + + +VG Sbjct: 53 QIGGADISKLVEAAKIVEDFGYNEINLNVGCPSARVHEGSFGACLMLNPDIVGDCIAAMC 112 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY------- 188 + V ++ + V+ ++K G I ++ Sbjct: 113 KALSIPVTVKCRIGVDDQIPAVALRNLVKSIKKSGVNGIWIHARKAILKGLSPKDNRKIP 172 Query: 189 --DLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 D + + +++ E + + +GG M L+ VDG + +K + + Sbjct: 173 NLDYDIVYEIKKENPDLFIGLNGGLEDMSQALKIL--PSVDGVMIGRAAYKNSAMLTTVD 230 Query: 246 AYLAT 250 Y + Sbjct: 231 EYFSN 235 >UniRef50_B0TE53 Biotin synthase n=2 Tax=Clostridia RepID=BIOB_HELMI Length = 326 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 65/249 (26%), Gaps = 17/249 (6%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY--DITASSDGRVVDKSWVSRVAEVID 74 VK + IV A+ EGA S + R+ Sbjct: 82 CVKTY---DLLDPDAIVGRARVMEAEGAHRFSLVTSGRGMSDAELEPVLAIYERLRRETK 138 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 + C + GI + ++ G N A + + + Sbjct: 139 LSLCASLGILNEAQLRRLAEAGVTMYHHNLEASRRFFPQICTTHSYDERIATIRAAQAAG 198 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + T + + ++E+ R +LN + + + L+ Sbjct: 199 MVVCSGGIFSM----GETIDDRIDMAFELRELGIRSVPINILNPIAGTPLEGQPLIPPLE 254 Query: 195 KVREVCHVPLI--------ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 ++ + LI A G G + A D AL S + E Sbjct: 255 ILKSIALYRLILPSARIRMAGGREGALRDLQSLPFIAGADAALVGSYLTTSGRTVAEDIQ 314 Query: 247 YLATQGVEI 255 L G+ + Sbjct: 315 MLRDLGLNV 323 >UniRef50_Q2NFE8 TrpC n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NFE8_METST Length = 263 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 27/220 (12%), Positives = 65/220 (29%), Gaps = 36/220 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 + Y + D + + + + + + + P I Sbjct: 73 KAEDVIPIYDKNNVDMMSILTEETYFKSNLKNFNIANNL---TNKPLLRKDFIIDEYMIY 129 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + A I + S + ++ G+ +V Sbjct: 130 EAAVNNASGILLISGICPNIEEYLNISRNLGLDAVV------------------------ 165 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 + TL+ ++ V I +N N D +L+ K++++ LI+ G Sbjct: 166 -----ECHTLEDIESVVDYNPEIIGINNRNLDDFT--INLKTTKELKKYVPNYLISESGV 218 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 T+E + ++ DG L + + E++ ++ Sbjct: 219 KTIEDAKK-LKEYGADGILIGTSILQN-NTEKEIEKFIEN 256 >UniRef50_B8MSD1 tRNA dihydrouridine synthase (Smm1), putative n=18 Tax=Leotiomyceta RepID=B8MSD1_TALSN Length = 787 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 8/182 (4%) Query: 64 SWVSRV-AEVIDIPFCVAGGIKSLE---DAAKILSFGADKISINSPALADPTLITRLADR 119 S + R+ E G S E AAK+++ I +NS + + Sbjct: 436 SVIYRIDPENEKGKLIFQIGTASPEFAVQAAKVVAGDVAGIDVNSGCPKPFSTSGGMGAA 495 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 + + R T T V + G + ++ Sbjct: 496 LLRTPDKLVSILESLVREVGTPYKIGISVKIRLLETPELTKSLVTRLVATGITGLTIHCR 555 Query: 180 NQDGVRNGYDL----EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 + + +V V + +G + + LE ++ +VDGA+ A+ Sbjct: 556 TTPMRPRERAIRDQLSMIAEVCRNAGVACVMNGDVTSRDQALELMKEYNVDGAMIATAAE 615 Query: 236 KQ 237 Sbjct: 616 AN 617 Score = 47.8 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 30/99 (30%), Gaps = 8/99 (8%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV----DKSWVS 67 + G VK E L R G L + T R S ++ Sbjct: 518 YKIGISVKIRL---LETPELTKSLVTRLVATGITGLTIHCRTTPMRPRERAIRDQLSMIA 574 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSP 105 V + + G + S + A +++ + D I + Sbjct: 575 EVCRNAGVACVMNGDVTSRDQALELMKEYNVDGAMIATA 613 >UniRef50_A2CB59 Indole-3-glycerol phosphate synthase n=22 Tax=Bacteria RepID=TRPC_PROM3 Length = 301 Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 60/229 (26%), Gaps = 39/229 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D V +A YAE GA L + G + V + + +P I + Sbjct: 100 DPVLIANAYAEGGASCLSVLTDKSFFQGG---FEVLVEVRQTVGLPLLCKDFILTPYQLY 156 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GAD + L+D + Y Sbjct: 157 QARAAGADAALLIMAILSD--------------------------QDLTYLSKVANSLGL 190 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC-------HVP 203 V + + + + G I +N + DLE + + + V Sbjct: 191 TVLVEVHDAEELERVLNLGGFPLIGINNRDLTTFET--DLETTETLSKQFATRLKQQGVL 248 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 L++ G + + L +Q LK + Sbjct: 249 LVSESGLFNRADLDRV-QAVGAEAVLVGEALMRQSDVCAGLKQLMIGDE 296 >UniRef50_C0D969 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D969_9CLOT Length = 634 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 42/161 (26%), Gaps = 10/161 (6%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFY---------DITASSDGRVVDKSWVSRVAEVID 74 + + + + K E G D + + S V + Sbjct: 210 ERGRKLPETIEIIKLLEEAGIDAVHVSIGMPESEEYMCAPMDIPDGFNTSAAEAVKREVK 269 Query: 75 IPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G I ++E A +IL G AD +I LADP L+ + Sbjct: 270 IPVITVGRITTMEQAEEILEQGKADLTAIGRAQLADPGLVNKYMGGDPAPVRRCIGCNQG 329 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 + + ++ + + Sbjct: 330 CRAATVRKKIRCMQNVRIGNEKALTFAPPSPALEAKKVVIV 370 Score = 53.2 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 12/100 (12%) Query: 166 VQKRGAGEIVLN---------MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHF 216 +++ G + ++ M + +G++ + V+ +P+I G TME Sbjct: 225 LEEAGIDAVHVSIGMPESEEYMCAPMDIPDGFNTSAAEAVKREVKIPVITVGRITTMEQA 284 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 E D + + Y+ +R Sbjct: 285 EEILEQGKADLTAIGRAQLADPGLVNK---YMGGDPAPVR 321 >UniRef50_C9KP46 Oxidoreductase, FAD/FMN-binding n=2 Tax=Clostridiales RepID=C9KP46_9FIRM Length = 349 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 53/196 (27%), Gaps = 18/196 (9%) Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT-----RLADRFGVQ 123 + + +P + A + + G D + I+S D +G Sbjct: 153 APQELTVPQIAEIVEQFARAAERAKTAGYDGVEIHSAHAYLLNQFYSPLTNHREDNYGGN 212 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ--------WETLDWVQEVQKRGAGEIV 175 + V + R +++ + + G + Sbjct: 213 IDNRLRIHREVIRAVRDAVGKEFIISLRLGGCDYSEGGSVIEDSVYASKVLADAGIDMLN 272 Query: 176 LNMMNQDGVRNGYD-----LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 + R G++ + +++ +P++ +GG T+E ++ D Sbjct: 273 ITGGMCRYTRKGHNEPGYFQDMSSAIKKAVSIPVMLTGGVKTLEDAETLLKNEAADLIGV 332 Query: 231 ASVFHKQIINIGELKA 246 K + E Sbjct: 333 GREIMKNPYWLNEQLE 348 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 11/111 (9%) Query: 16 QVVKGVQF-----RNHEIIGDIVPLAKRYAEEGADELVFYDI----TASSDGRV-VDKSW 65 ++ +I D V +K A+ G D L T + Sbjct: 235 FIISLRLGGCDYSEGGSVIEDSVYASKVLADAGIDMLNITGGMCRYTRKGHNEPGYFQDM 294 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITR 115 S + + + IP + GG+K+LEDA +L AD I + + +P + Sbjct: 295 SSAIKKAVSIPVMLTGGVKTLEDAETLLKNEAADLIGVGREIMKNPYWLNE 345 >UniRef50_A7HXZ6 Indole-3-glycerol phosphate synthase n=4 Tax=Alphaproteobacteria RepID=TRPC_PARL1 Length = 265 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 60/220 (27%), Gaps = 33/220 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D LA+ Y GA L S G ++S + +P + A Sbjct: 75 DPPALARAYQAGGATCLSILTDGPSFQGAP---DYLSDARAAVSLPVLRKDFMYDTYQVA 131 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + GAD I I A++D FG + V+ Sbjct: 132 EARAMGADAILIIMAAVSDAQAREIEEAAFGWKMDVLV---------------------- 169 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGG 209 + + + + + + +N N E+L + + L+ G Sbjct: 170 -----EVHDEEELARAVELKSPLLGINNRNLKTFETTLATTERLAPLVPSGRL-LVGESG 223 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 + V L +Q +A LA Sbjct: 224 IFAPDDLTR-LSKVGVRTFLVGESLMRQTDVEAATRALLA 262 >UniRef50_B4YSU4 BaiH n=2 Tax=Clostridium hylemonae RepID=B4YSU4_9CLOT Length = 672 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 53/192 (27%), Gaps = 12/192 (6%) Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 + + G SL A + G + + + + RF ++ Sbjct: 157 IIRQFGAAARRVQEAGCGGISLHCAHAYMQPGTFLSPLRNKRMDEYGGCLDNRARFILEV 216 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN---- 180 I ++ E + + L + + G + ++ Sbjct: 217 IEEVRKNVSADFPVFLRISGDERAEGG--NSLEDMLYLAPKFEAAGVDLLEVSGGTQYEG 274 Query: 181 ------QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 G R G ++ + ++++V +P+ A G + + + VDG Sbjct: 275 LEYTIPSQGKRIGMNIYEAAEIKKVVGIPVYAVGKINDIRYAADIVERGIVDGVAVGRPL 334 Query: 235 HKQIINIGELKA 246 + K Sbjct: 335 LADPDLCKKAKE 346 >UniRef50_Q82KQ8 Putative oxidoreductase n=1 Tax=Streptomyces avermitilis RepID=Q82KQ8_STRAW Length = 755 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 6/99 (6%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDI-----TASSDGRVVDKSWVSRVAEVIDIPFC 78 D V +A+ +A GAD + + GR + R+ +P Sbjct: 617 EGGTTAEDAVEIARAFAAHGADAIDVSTGQVVADEQPAYGRSYQTPYADRIRGEAGVPVI 676 Query: 79 VAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRL 116 G I S +D ++ G D ++ P L DP Sbjct: 677 AVGAISSWDDVNSLILAGRTDLCALARPHLYDPHWTLHA 715 >UniRef50_B8C9N7 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C9N7_THAPS Length = 389 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 40/109 (36%), Gaps = 5/109 (4%) Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQ 192 + + R + +T+ + ++++ G I ++ N++ +G D E Sbjct: 152 FCQKNLISSKPMLSAKIRLLDSVEDTIAFARKLRNAGIDYIAIHCRNREAKHDGAADWEA 211 Query: 193 LKKVREVCHV----PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 K+ V P+I +GG + + G + A+ + + Sbjct: 212 GAKLVSSLSVGDALPVIVNGGISCYTDAEFVTKQTNCHGVMVATGYLQN 260 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 20/192 (10%), Positives = 47/192 (24%), Gaps = 12/192 (6%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITA-SSDGRVVDKSWVSRVAEVIDI-- 75 K + + D + A++ G D + + + D +++ + + Sbjct: 167 KIRL---LDSVEDTIAFARKLRNAGIDYIAIHCRNREAKHDGAADWEAGAKLVSSLSVGD 223 Query: 76 --PFCVAGGIKSLEDAAK-ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 P V GGI DA + + + L + + + V + Sbjct: 224 ALPVIVNGGISCYTDAEFVTKQTNCHGVMVATGYLQNHRNYAITTEGECNSAVNVASEYL 283 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 AE Y R + + + Sbjct: 284 DYAERYPPPSYLYIQKHFRWIFRSVLQPTDDSRFVPNDYSDWRV---KLWSFLVRPYIRT 340 Query: 193 LKKVREVCHVPL 204 + + R + + Sbjct: 341 IHQFRLFLALYV 352 >UniRef50_Q1G992 Dihydroorotate dehydrogenase n=3 Tax=Lactobacillus delbrueckii RepID=Q1G992_LACDA Length = 309 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 44/125 (35%), Gaps = 26/125 (20%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD------IT------------ASSDG- 58 VK + IV +A+ GAD L + + G Sbjct: 167 VKLT-----PNVTSIVEIAQAAEGGGADGLTLINTLLVLHLDLKTRRPVLGNDFGGLYGQ 221 Query: 59 --RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 + V V++V + +P GGI S EDAA+ + GA + I S + D I + Sbjct: 222 AVKPVAVRMVAQVKQATSLPIIGVGGINSPEDAAEFILAGASAVQIGSMSFYDKLAIKHV 281 Query: 117 ADRFG 121 D Sbjct: 282 IDGLP 286 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%) Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 + + +V++ +P+I GG + E E A S+ + I + Sbjct: 224 KPVAVRMVAQVKQATSLPIIGVGGINSPEDAAEFI-LAGASAVQIGSMSFYDKLAIKHVI 282 Query: 246 AYL 248 L Sbjct: 283 DGL 285 >UniRef50_C0QB73 TrpC n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QB73_DESAH Length = 484 Score = 58.6 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 61/222 (27%), Gaps = 35/222 (15%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D A+RY GA + + G + D V R +P I S Sbjct: 76 DPFEHARRYTRGGARAISVLTESNFFKGSLADLEAVRR---ATHLPILRKDFIFSEFQIY 132 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + GA+ + + +P L DP + + Sbjct: 133 EARVAGANAVLLITP-LMDPGEL--------------------------AAYIALAREIG 165 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI--ASG 208 + + + + K GA I +N N + + DL+ +++ LI A+ Sbjct: 166 MEPLVEINSERQFETAAKAGATLIGINNRNLETLET--DLKVAQRLAPFFSQDLIPVAAS 223 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 G + + L + + L Sbjct: 224 GISARSDIEAGIG-SGIVNFLVGESIVRAQDTEAFIGELLGE 264 >UniRef50_A9UW45 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UW45_MONBE Length = 267 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 11/104 (10%), Positives = 28/104 (26%), Gaps = 6/104 (5%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASS---DGRVVDKSWVSRVAE 71 K + + + A+R G L T++ + + ++++ Sbjct: 152 PITCKLRL---QASVAETIATAQRLEAWGVSLLTIEGRTSAQLDSRRGIANWEDIAQIRA 208 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + IP G + E L++ + Sbjct: 209 AVGIPILYNGDLVVREQIEACLAYTGWFVRHPRNPPTFDHTKAH 252 Score = 47.4 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 43/158 (27%), Gaps = 9/158 (5%) Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 AE + + FC G K+ ++ L R + ++ Sbjct: 83 AENVIVQFCANNGDFFARAIDKV------RLRCRGVDLNLSWTSKRAERGGYGEYLLKNP 136 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG---VRN 186 + R + + ET+ Q ++ G + + R Sbjct: 137 TQLESVVRAGVATQVPITCKLRLQASVAETIATAQRLEAWGVSLLTIEGRTSAQLDSRRG 196 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + E + ++R +P++ +G E Sbjct: 197 IANWEDIAQIRAAVGIPILYNGDLVVREQIEACLAYTG 234 >UniRef50_UPI0001BCB21D enoyl-[acyl-carrier-protein] reductase n=1 Tax=Fusobacterium periodonticum ATCC 33693 RepID=UPI0001BCB21D Length = 331 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Query: 32 IVPLAKRYAEEGADELVFYDI-TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 V LA+R + GAD ++ + + G + + + ++ + IP AGGI S + Sbjct: 133 TVKLAERMEKIGADAVIVEGMESGGHIGTLTTMALLPQIVNAVSIPVIAAGGIASGKQFL 192 Query: 91 KILSFGADKISINSPALADPTLITR 115 LS GAD + + L I Sbjct: 193 AALSMGADAVQCGTIFLTAKECIIH 217 Score = 50.9 bits (120), Expect = 5e-05, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Query: 166 VQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 ++K GA +++ M G + L ++ +P+IA+GG + + FL A Sbjct: 140 MEKIGADAVIVEGMESGGHIGTLTTMALLPQIVNAVSIPVIAAGGIASGKQFLAAL-SMG 198 Query: 225 VDGALAASVFHKQII 239 D ++F Sbjct: 199 ADAVQCGTIFLTAKE 213 >UniRef50_Q7UQJ1 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UQJ1_RHOBA Length = 272 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 32/246 (13%), Positives = 60/246 (24%), Gaps = 29/246 (11%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEI------IGDIVPLAKRYAEEGADELVFYDITASSDG 58 R+I +D++DG V G+ + D L Y G D+ G Sbjct: 29 RLIGVIDLKDGVAVHGIAGNRSQYQPIAGLSADECSLLHWYRSIGIRRFYVADLNG-LMG 87 Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL-- 116 + + + I+ E + G + + Sbjct: 88 TGRQRDALLALVTE----------IRQEETL--WIDSGWTGSISRMDQEWLSRMNRSIAN 135 Query: 117 -----ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGA 171 + + ++ + V +WV KR Sbjct: 136 ESNLRWIIATETADSLDVQDRMLEFVNSSNLTLSLDFRAGQFVGPETASNWVLAALKRNI 195 Query: 172 GEIVLNMMNQDGVRNGYDLEQL--KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 E +L + G +G ++ V + I GG ++ L Sbjct: 196 REGILLDVASVGSESGPASGEMFSDCVSRFGDMSWITGGGIRNVKDV-RGLVSEGYSAFL 254 Query: 230 AASVFH 235 AS Sbjct: 255 VASAML 260 >UniRef50_D1AI07 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=Bacteria RepID=D1AI07_SEBTE Length = 374 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 24/221 (10%), Positives = 58/221 (26%), Gaps = 27/221 (12%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + R +I + + K + G D + I+ Sbjct: 130 SPRTPDVIPRELHEAEIDRIIEDF---GKATKKAIDTGFDGVEIHGANTYLIQQFFSPHS 186 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAG------ 172 I + +E + +E++ G Sbjct: 187 NRRTDRWGGDIQKRMLFPMKVIDKVKRVAEEYGKKDFIVGYRFSPEEIETPGIRIEDTLV 246 Query: 173 -------------EIVLNMMNQDG-VRNGYDLEQLKKVREVCH--VPLIASGGAGTMEHF 216 I L ++ + +GYD ++ + + + +P+IA GG T + Sbjct: 247 LVENLISKELDYIHISLQDIHAKPSMGSGYDKSMVEMIIDKVNGRIPVIAVGGIHTPDEA 306 Query: 217 LEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 L+ D D + + + + + +++ Sbjct: 307 LKIVED-GADMIALGRELIMEPDWVKKAEED-QEDEIAVKM 345 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 5/131 (3%) Query: 29 IGDIVPLAKRYAEEGADELVFYDIT---ASSDGRVVDKSWVSRVAEVID--IPFCVAGGI 83 I D + L + + D + S G DKS V + + ++ IP GGI Sbjct: 241 IEDTLVLVENLISKELDYIHISLQDIHAKPSMGSGYDKSMVEMIIDKVNGRIPVIAVGGI 300 Query: 84 KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVN 143 + ++A KI+ GAD I++ + +P + + + + V D + Sbjct: 301 HTPDEALKIVEDGADMIALGRELIMEPDWVKKAEEDQEDEIAVKMSRGSKDKLVIPDALY 360 Query: 144 QYTGDESRTRV 154 + + Sbjct: 361 KQIENTDGWFP 371 >UniRef50_B7FYN1 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FYN1_PHATR Length = 231 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 57/213 (26%), Gaps = 15/213 (7%) Query: 41 EEGADELV---FYDI--TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLE-DAAKILS 94 GAD + D T + + + E + + G L AA + Sbjct: 18 SYGADWVYTEELVDRALTGTIRVENKELGTIDY--ERGKLVCQLGSGEPDLALAAALHVH 75 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 D I +N ++ + + R Sbjct: 76 QDVDAIDLNMGCPKKFSVSGGMGSALLSDPER-ACRIIRTLTENLSSKGIPVSAKIRLLK 134 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKV-----REVCHVPLIASG 208 T+ ++ + + GA I ++ D L++V H+P + +G Sbjct: 135 DVSSTVAFIAGLVEAGAKAIAVHGRQVSDDCTVPARWSMLREVIKEAVHRFPHIPFLLNG 194 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 T + F+ RD G L A Sbjct: 195 DFYTRDEFVSFMRDTGARGVLLARPALFNTSIF 227 Score = 50.1 bits (118), Expect = 7e-05, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 10/104 (9%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVI---- 73 K + + V E GA + + S D S + V + Sbjct: 129 KIRL---LKDVSSTVAFIAGLVEAGAKAIAVHGRQVSDDCTVPARWSMLREVIKEAVHRF 185 Query: 74 -DIPFCVAGGIKSL-EDAAKILSFGADKISINSPALADPTLITR 115 IPF + G + E + + GA + + PAL + ++ + Sbjct: 186 PHIPFLLNGDFYTRDEFVSFMRDTGARGVLLARPALFNTSIFCK 229 >UniRef50_A1RXV6 Geranylgeranylglyceryl phosphate synthase n=4 Tax=Archaea RepID=GGGPS_THEPD Length = 255 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 27/240 (11%), Positives = 65/240 (27%), Gaps = 9/240 (3%) Query: 12 VRDGQVVKGVQFRNHEIIGD-IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVA 70 +R+ + + + +A+ AE G ++ + V + Sbjct: 13 IREHGAIHMTLIDPEKTTPEVAARIAREVAEAGTSAIMVGGSIGV--SEAMTDEVVLAIK 70 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 ++P + G S ++ +NS T + + + Sbjct: 71 RSTEVPVILFPG--SPTALSRHADAVWFLSVLNSQNPYFITGAQMQGAPIVKRYGLEVLP 128 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 Y V+ + + + G + L + Sbjct: 129 LGYIIVGEGGAVSIVSYTRPLPFAKPEVVAAYALAAEYMGFQFVYLEGGSG---GEPVPP 185 Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + +K V+ V +PLI GG + E + A D + ++ + + + Sbjct: 186 KIVKMVKGVTTLPLIVGGGIRSPE-VAKELAKAGADIIVTGTIVEESENIRETIGRIVRA 244 Score = 51.3 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 31/92 (33%), Gaps = 6/92 (6%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDI---VPLAKRYAEEGADELVFYDITASSDGRVVDKSWV 66 + V +G V V + A G + + G V V Sbjct: 132 IIVGEGGAVSIVSYTRPLPFAKPEVVAAYALAAEYMGFQFVYLEGGSG---GEPVPPKIV 188 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGAD 98 V V +P V GGI+S E A ++ GAD Sbjct: 189 KMVKGVTTLPLIVGGGIRSPEVAKELAKAGAD 220 >UniRef50_Q0JEG3 Os04g0278900 protein n=3 Tax=Oryza sativa RepID=Q0JEG3_ORYSJ Length = 368 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 24/197 (12%), Positives = 56/197 (28%), Gaps = 16/197 (8%) Query: 58 GRVVDKS-WVSRVAEVIDIPFCVAG-GIKSLEDAAKILSFG-ADKISINSPALADPTLIT 114 + + +++ AE I + G + +L A ++ + D+I++N + Sbjct: 34 HQKDNLDRFLAFPAEQHPIVLQIGGSNLDNLAKATELANAYSYDEINLNCGCPSGKVAGH 93 Query: 115 RLA-DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKR-GAG 172 R VG A V+ R + E ++V +V + Sbjct: 94 GCFGARLMFDPEFVGDAMSAIAANCNVPVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTR 153 Query: 173 EIVLNMMNQDGVRNGYDL----------EQLKKVREVCHVPLIASGGAGTMEHFLEAFRD 222 +++ +R+ V +GG T++ + R Sbjct: 154 HFIIHARKALLSGLSPAENRNVPPLKYEYYFALLRDFPDVQFTLNGGITTIDQVTASIRQ 213 Query: 223 ADVDGALAASVFHKQII 239 + + Sbjct: 214 -GAHRVMVGRAAYNNPW 229 Score = 41.6 bits (96), Expect = 0.028, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 36/111 (32%), Gaps = 12/111 (10%) Query: 15 GQVVKGVQFRNHEII-GDIVPLA-KRYAEEGADELVFYDITASSDG----RVVDKSWVSR 68 VK + ++ K ++ + + A G + + Sbjct: 121 PVSVKCRIGVDDRDSYEELCEFVDKVVSKSPTRHFIIHARKALLSGLSPAENRNVPPLKY 180 Query: 69 ------VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + + D+ F + GGI +++ + GA ++ + A +P + Sbjct: 181 EYYFALLRDFPDVQFTLNGGITTIDQVTASIRQGAHRVMVGRAAYNNPWNM 231 >UniRef50_A7EKL8 tRNA-dihydrouridine synthase 3 n=10 Tax=Leotiomyceta RepID=DUS3_SCLS1 Length = 750 Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats. Identities = 12/105 (11%), Positives = 28/105 (26%), Gaps = 29/105 (27%) Query: 169 RGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH-------------------------- 201 G I L+ ++ D + + + Sbjct: 524 PGCAAITLHGRSRQQRYTKNADWSYIAECAALVKSYNQKKDDLTDTIMEPDARTLPNAPD 583 Query: 202 --VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + I +G + +L+ ++A VD + A + E+ Sbjct: 584 GKLHFIGNGDCYSHVDYLDHIQNASVDSVMVARGALIKPWLFEEI 628 >UniRef50_B8P1L7 Predicted protein (Fragment) n=3 Tax=Basidiomycota RepID=B8P1L7_POSPM Length = 313 Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 21/206 (10%), Positives = 57/206 (27%), Gaps = 13/206 (6%) Query: 48 VFYDITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLEDAAKILSFGADKISINSP 105 V T K+ + I + + AA+ + +N Sbjct: 47 VVDPTTGVISYVGKTKALFTTHPIEKPYLIYQIGSADPELAVQAARTVVQDVAGFDLNCG 106 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 + + + ++ E ++ R +Q +TL V+ Sbjct: 107 CPKPFSTHSGMGAALLSNPDLLCSILTALREAMPPEISISAK--IRLLPSQEDTLKLVER 164 Query: 166 VQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC-----HVPLIASGGAGTMEHFLEA 219 + G + ++ ++ + +++L+++ + V LI +G + + Sbjct: 165 IVNTGVNALTVHCRTRNMRKREKAHIDRLREIVDFVRGLGRDVALIENGDCEDYQDAIRI 224 Query: 220 FRDAD---VDGALAASVFHKQIINIG 242 D + A+ Sbjct: 225 REITGYVGADSVMIATAAEANPTCFS 250 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 42/138 (30%), Gaps = 13/138 (9%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI---- 73 K D + L +R G + L + T + R + + + + Sbjct: 148 KIRL---LPSQEDTLKLVERIVNTGVNALTVHCRTRNMRKREKAHIDRLREIVDFVRGLG 204 Query: 74 -DIPFCVAGGIKSLEDAAKILSF----GADKISINSPALADPTLITRLADRFGVQCIVVG 128 D+ G + +DA +I GAD + I + A A+PT + + Sbjct: 205 RDVALIENGDCEDYQDAIRIREITGYVGADSVMIATAAEANPTCFSPNPLTDVEMTFIPQ 264 Query: 129 IDTWYDAETGKYHVNQYT 146 + ++ Sbjct: 265 YMRLCRYLNNHWSSTKFC 282 >UniRef50_C1XIL7 NADH:flavin oxidoreductase n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XIL7_MEIRU Length = 775 Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 38/113 (33%), Gaps = 6/113 (5%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDI-----TASSDGRVVDKSWVSRVAEVIDIPFCV 79 D V +A+ + E G D + GR+ + R+ + I Sbjct: 638 GGNTPDDAVEIARLFKEAGCDLIDVSSGQTTRQARPVYGRMYQTPFADRIRNEVGIATMA 697 Query: 80 AGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 G I + I++ G AD +I P LADP A R G I Sbjct: 698 VGAIYEADHVNSIIAAGRADLCAIARPHLADPHWTLNQAARLGYTEISWPKQY 750 >UniRef50_O27697 Tryptophan synthase alpha chain n=3 Tax=Methanobacteriaceae RepID=TRPA_METTH Length = 270 Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 53/230 (23%), Gaps = 37/230 (16%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVF--------YDIT----------ASSDGRVVDKSWV 66 + + + + + GAD L D T + + Sbjct: 28 GDPDMETSLEIIRTLVDAGADALEVGFPFSDPIADGTSVQGADLRALRAGMTTEKCFQLI 87 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 RV E IP + ++ D Sbjct: 88 ERVREFTSIPIGL-----------------LVYYNLIYRMGVDEFYRRAAEAGVTGILAA 130 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR- 185 T E L + EV + + + R Sbjct: 131 DLPPEEASDALRAAEKYDIDQIFIVAPTTGSERLKRISEVSSGFHYLVSVMGVTGARSRV 190 Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +E +K+V+ +P++ G EH RDA DG + S Sbjct: 191 EDATIELIKRVKAEGSLPVMVGFGVSRPEHV-RMLRDAGADGVIVGSAII 239 Score = 40.1 bits (92), Expect = 0.082, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 25/82 (30%), Gaps = 1/82 (1%) Query: 47 LVFYDITASSDG-RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 + +T + + RV +P V G+ E + GAD + + S Sbjct: 178 VSVMGVTGARSRVEDATIELIKRVKAEGSLPVMVGFGVSRPEHVRMLRDAGADGVIVGSA 237 Query: 106 ALADPTLITRLADRFGVQCIVV 127 + + + + + Sbjct: 238 IIDVISGNLGDRELMLQRIHEM 259 >UniRef50_UPI0000E499F9 PREDICTED: similar to glycolate oxidase; short-chain alpha-hydroxy acid oxidase n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E499F9 Length = 363 Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 20/200 (10%), Positives = 49/200 (24%), Gaps = 10/200 (5%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 + ++ + +D+P A + D + D + Sbjct: 128 KEAEREGFKAIVLTVDLPLWGDYSFFRSSHATSASKYYYDPSLRPTNLAIDIPEVHDAIR 187 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 V + +T + + T + E G I+++ Sbjct: 188 SGDVNLRHYLAQQFNSPKTWDDITWLKSITSLPIVLKGILTGEAAMEAADAGVSGIIVSA 247 Query: 179 MN-QDGVRNGYDLEQLKKVREVC---HVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + ++ L++V V + GG + L+A L Sbjct: 248 HGGRHMDGVPAPIDVLEEVVSAVKGRGVEVYMDGGVRSGTDALKALG-LGARAVLIGRPA 306 Query: 235 HK-----QIINIGELKAYLA 249 + ++ + L Sbjct: 307 LWGLACDGPAGVTKVLSILR 326 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 6/84 (7%) Query: 34 PLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVID---IPFCVAGGIKSLED 88 A A+ G ++ + DG + V + + + GG++S D Sbjct: 230 EAAMEAADAGVSGIIVSAHGG-RHMDGVPAPIDVLEEVVSAVKGRGVEVYMDGGVRSGTD 288 Query: 89 AAKILSFGADKISINSPALADPTL 112 A K L GA + I PAL Sbjct: 289 ALKALGLGARAVLIGRPALWGLAC 312 >UniRef50_Q1VYS9 Indole-3-glycerol phosphate synthase n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VYS9_9FLAO Length = 252 Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 55/207 (26%), Gaps = 35/207 (16%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D++ +A+ Y + GA + G + D V D+P + + Sbjct: 71 DVMEIAQAYEQMGATGISILTNQRYFGGSLEDLQLAKSV---CDLPLLRKDFMVDVYQVY 127 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + ++GAD I + + AL L + Sbjct: 128 EAKAYGADAILLIANALPAQKLEELAILAHNL---------------------------G 160 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL--EQLKKVREVCHVPLIASG 208 + + + + ++ + I +N N + L + + I+ Sbjct: 161 LEVLYEIHEAEEIHKLSESLIDLIGVNNRNLQTFEVSLQQGLDMLPHL--PTDLLKISES 218 Query: 209 GAGTMEHFLEAFRDADVDGALAASVFH 235 G +G L F Sbjct: 219 GIQDESTIKRLIEQ-GFNGVLVGEFFM 244 >UniRef50_D2LUG6 2,4-dienoyl-CoA reductase (NADPH) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LUG6_BACS4 Length = 649 Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 57/207 (27%), Gaps = 20/207 (9%) Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCI 125 V E++ A I+ E + GA I+ L T + + Sbjct: 142 EEVKELVKKFVTAA--IRCKEAGVDGVELHGAHGYLISQFLNPHTNLRTDMYGGSFANRM 199 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL-----DWVQEVQKRGAGEIVLNM-- 178 + + + S + + + ++K G I + Sbjct: 200 RFLEEIIIGIKEQCGNDYPVIVRLSVDEFDEDGIDVALSKNISRYLEKIGVDAIHASAGN 259 Query: 179 -------MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA 231 + G+ + +++++ ++P+I G ++ + D Sbjct: 260 YNSMEKVIESPLYEQGWRVYLAEEIKKEVNIPVITVGSIREPKYVESILAEGKADFVAIG 319 Query: 232 SVFHKQIINIGELKAYLATQGVEIRIC 258 K L + EIR+C Sbjct: 320 RGHIADPEW---TKKTLEGREKEIRLC 343 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 45/149 (30%), Gaps = 20/149 (13%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIV---PLAKRYAEEGADELVFYD---------ITA 54 P + V+ E D+ +++ + G D + I + Sbjct: 217 YPVI-------VRLSVDEFDEDGIDVALSKNISRYLEKIGVDAIHASAGNYNSMEKVIES 269 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLI 113 + + + ++IP G I+ + IL+ G AD ++I +ADP Sbjct: 270 PLYEQGWRVYLAEEIKKEVNIPVITVGSIREPKYVESILAEGKADFVAIGRGHIADPEWT 329 Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + + + + G Sbjct: 330 KKTLEGREKEIRLCISCLHCAYSKGHISC 358 >UniRef50_Q87AY2 tRNA-dihydrouridine synthase A n=15 Tax=Bacteria RepID=DUSA_XYLFT Length = 332 Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 22/181 (12%), Positives = 52/181 (28%), Gaps = 17/181 (9%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + A+ + +G +I++N +D + + A V Sbjct: 85 AKAASIAVDWGYSEINLNCGCPSDRVQAGSFGACLMREPA--LVADCVAAMAAVVSVPVT 142 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGA---GEIVLNMMNQDGVRNGYD---------LEQL 193 GA IV++ N + + Sbjct: 143 VKCRLGVNEDDDYGRFAKFVDWVIGASSSRMIVVHARNAWLQGLSPKENREIPPLRYDWV 202 Query: 194 KKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 +++ E + ++ +GG ++E L+ VDG + ++ + + L+ Sbjct: 203 YRLKRECPELAVVLNGGITSVEAGLDHL--LMVDGVMLGRAAYQDPYILHQFYCALSNAP 260 Query: 253 V 253 V Sbjct: 261 V 261 >UniRef50_A7EHJ6 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EHJ6_SCLS1 Length = 513 Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 9/97 (9%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 L K I+P ++ G VK E L ++ G L + T R Sbjct: 251 LVKEIVPEFEI--GISVKIRL---LETPERTEALVRKLCATGITGLTIHCRTTPMRPRER 305 Query: 62 ----DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 ++ + I + G +++ + A K+ Sbjct: 306 AIRGQLKMIADICRESGIACLMNGDVENRDQALKLAE 342 Score = 51.3 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 16/184 (8%), Positives = 52/184 (28%), Gaps = 8/184 (4%) Query: 62 DKSWVSRVAEVID----IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 ++S + R+ ++ I + A++++ I +N+ + + Sbjct: 175 NESLIFRLHPELEGKKLIFQIGTSDPEKAVQCARMVAADVAGIDVNAGCPKPFSTSGGMG 234 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 + + + R T T V+++ G + ++ Sbjct: 235 AALLQTPDKLCAILEALVKEIVPEFEIGISVKIRLLETPERTEALVRKLCATGITGLTIH 294 Query: 178 MMNQDGVRNGYDL----EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + + + + + + +G + L+ + +GA+ A Sbjct: 295 CRTTPMRPRERAIRGQLKMIADICRESGIACLMNGDVENRDQALKLAEEYGTNGAMIAVA 354 Query: 234 FHKQ 237 Sbjct: 355 AEAN 358 >UniRef50_Q9FI41 Emb|CAB87804.1 n=16 Tax=Embryophyta RepID=Q9FI41_ARATH Length = 387 Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 20/223 (8%), Positives = 56/223 (25%), Gaps = 19/223 (8%) Query: 35 LAKRYAEEGADELVFYDITAS-SDGRVVDKS-WVSRVAEVIDIPFCVAG-GIKSLEDAAK 91 LA+ + L + A + + +++ + I + G +++L A + Sbjct: 28 LARLITKH--AWLYTEMLAAETIVYQEDNLDSFLAFSPDQHPIVLQIGGRNLENLAKATR 85 Query: 92 ILSFGA-DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + + A D+I+ N + + + Sbjct: 86 LANAYAYDEINFNCGCPSPKVSGRGCFGALLMLDPKFVGEAMSVIAANTNAAVTVKCRIG 145 Query: 151 RTRVTQWETLDWVQEVQKR--GAGEIVLNMMNQDGVRNGYD----------LEQLKKVRE 198 + L + +++ +R+ Sbjct: 146 VDDHDSYNELCDFIHIVSSLSPTKHFIIHSRKALLSGLSPSDNRRIPPLKYEFFFALLRD 205 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 + +GG ++ A R + G + + +I Sbjct: 206 FPDLKFTINGGINSVVEADAALR-SGAHGVMLGRAVYYNPWHI 247 >UniRef50_B3RND8 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RND8_TRIAD Length = 519 Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 1/84 (1%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 + ++ AKR G L R+ D + V V + + IP I + Sbjct: 159 DKDSSSLIKYAKRLESAGCQLLSIGCRHKEPRFRLDDWNIVKAVKDSVVIPVFACSDIST 218 Query: 86 LEDAAKILSF-GADKISINSPALA 108 L +A L + GA I + L Sbjct: 219 LAEADLCLEYTGAQGIMSHDTELY 242 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 15/172 (8%), Positives = 46/172 (26%), Gaps = 5/172 (2%) Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 D P V + + L T + ++ + + Sbjct: 81 DRPLIVQLCSRDPNRMLQAAERVDSLCDAIDLTLHSETNAKTILNQAVGKDFQLLQRMIS 140 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL 193 ++ + + + + ++ G + + +++ D + Sbjct: 141 LLRDN-LNMPVACKIKIAADKDSSSLIKYAKRLESAGCQLLSIGCRHKEPRFRLDDWNIV 199 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 K V++ +P+ A T+ G ++ H + ++K Sbjct: 200 KAVKDSVVIPVFACSDISTLAEADLCLEYTGAQGIMS----HDTELYYRQIK 247 >UniRef50_Q02YU5 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=30 Tax=Firmicutes RepID=NANE_LACLS Length = 234 Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 25/239 (10%), Positives = 60/239 (25%), Gaps = 35/239 (14%) Query: 12 VRDGQVVKGVQFRNHE-IIGD----IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWV 66 ++ G +V + + +AK + GA + R + Sbjct: 10 IKGGIIVSCQALPGEPLYSENGGVMPL-MAKAAEQAGAVAI-----------RANSVRDI 57 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 + + + +P I+ A + Sbjct: 58 KEIQKAVSLPIIG------------IIKKDYLPQKSFITATMKEIDELVATSCEVIALDC 105 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN--MMNQDGV 184 + ++ ++ + + G + ++ Sbjct: 106 TLRERHDGLTINQFIKKIKEKYPTQLLMADCSNFKECENAYSAGVDFVGTTLSGYTEESK 165 Query: 185 RN-GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + D E L+K+ E +P+IA G + E + VDG + + + I Sbjct: 166 KQDEPDFELLEKLVEA-KIPVIAEGRIHSPEQAQ-YVQKIGVDGMVIG-GAITRPLEIA 221 >UniRef50_B1JA40 2-nitropropane dioxygenase NPD n=11 Tax=Proteobacteria RepID=B1JA40_PSEPW Length = 358 Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 11/84 (13%) Query: 165 EVQKRGAGEIVLNMMNQDGVRNGYDLEQL----------KKVREVCHVPLIASGGAGTME 214 ++ G I+ G R + E + +V + +P+IA+GG Sbjct: 168 WLEANGCDAIIAMGFEAGGHRGMFLSEDINSQIGTFALVPQVADAVDLPVIAAGGIADHR 227 Query: 215 HFLEAFRDADVDGALAASVFHKQI 238 + A + + Sbjct: 228 GLVAAL-ALGASAVQIGTAYLFCP 250 Score = 50.5 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 11/112 (9%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS----------SDGRVVDKSWVS 67 VK V A G D ++ A + ++ + V Sbjct: 149 VKA-SGAKVLSSATTVEEALWLEANGCDAIIAMGFEAGGHRGMFLSEDINSQIGTFALVP 207 Query: 68 RVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADR 119 +VA+ +D+P AGGI L+ GA + I + L P A R Sbjct: 208 QVADAVDLPVIAAGGIADHRGLVAALALGASAVQIGTAYLFCPQAKVSAAHR 259 >UniRef50_P21795 Lactate 2-monooxygenase n=24 Tax=Bacteria RepID=LA2M_MYCSM Length = 394 Score = 57.4 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 53/225 (23%), Gaps = 27/225 (12%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL-EDAAKIL 93 +R E G D LV T R D + + PF + + D Sbjct: 164 FIRRAEEAGYDGLVITLDTWIFGWRPRDLTI-------SNFPFLRGLCLTNYVTDPVFQK 216 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 F A +P L + T + + + Sbjct: 217 KFKAHSGVEAEGLRDNPRLAADFWHGLFGHSV-----------TWEDIDWVRSITKMPVI 265 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVC-HVPLIASGGAG 211 + + D + G I + G L+ L +V + P++ G Sbjct: 266 LKGIQHPDDARRAVDSGVDGIYCSNHGGRQANGGLPALDCLPEVVKASGDTPVLFDSGIR 325 Query: 212 TMEHFLEAFRDADVDGALAAS-----VFHKQIINIGELKAYLATQ 251 T ++A I + L + Sbjct: 326 TGADVVKAL-AMGASAVGIGRPYAWGAALGGSKGIEHVARSLLAE 369 Score = 43.6 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 4/78 (5%) Query: 34 PLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVI-DIPFCVAGGIKSLEDAA 90 A+R + G D + + ++ G + V + D P GI++ D Sbjct: 273 DDARRAVDSGVDGIYCSNHGGRQANGGLPA-LDCLPEVVKASGDTPVLFDSGIRTGADVV 331 Query: 91 KILSFGADKISINSPALA 108 K L+ GA + I P Sbjct: 332 KALAMGASAVGIGRPYAW 349 >UniRef50_UPI0001C41F37 tRNA-dihydrouridine synthase DusA2 n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41F37 Length = 237 Score = 57.4 bits (137), Expect = 5e-07, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDG-RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 D + +AK + G D L A G R D + +AE +I I S+ A Sbjct: 150 DNLEIAKLAEDCGVDYLHI---DAMKMGVRDADFYLIKEIAENTNIFIIGNNSINSISQA 206 Query: 90 AKILSFGADKISINSPAL 107 K+L+ GA+ ISI A+ Sbjct: 207 EKMLNAGANGISIARAAI 224 Score = 50.5 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 23/227 (10%), Positives = 59/227 (25%), Gaps = 21/227 (9%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIP--FCVAGGIKSLEDAA 90 A + G D + S+ + ++R + + P + + Sbjct: 7 AEFAMKLIPYGFDTVTIGGYNTDSESIDACEKIIARGRKEFNYPKEEIYSVIENEVNAIK 66 Query: 91 KILSFGADKISINSPA----------------LADPTLITRLADRFGVQCIVVGIDTWYD 134 + S + L Q +++ D Sbjct: 67 DSFNVQVSANLRGSTPDPLIKISKIEKLDIIEINCHCRQEELVAVGCGQSMLLRPDLEDY 126 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLK 194 + R V + L+ + + G + ++ M D +K Sbjct: 127 IREVVKKSESKVSMKMRANVEGVDNLEIAKLAEDCGVDYLHIDAM--KMGVRDADFYLIK 184 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 ++ E ++ +I + ++ + +A +G A +N Sbjct: 185 EIAENTNIFIIGNNSINSISQAEKML-NAGANGISIARAAISGKLNF 230 >UniRef50_C7NTV9 Dihydropyrimidine dehydrogenase n=10 Tax=Halobacteriaceae RepID=C7NTV9_HALUD Length = 262 Score = 57.0 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 11/104 (10%) Query: 2 LAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV 61 LAK++ D VK + + + +A+R GAD + + + Sbjct: 140 LAKQVETAADAGATVSVKVRTEIDGVDL---LAVARRIEAAGADAVHVDAMDSEG----- 191 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSP 105 V+ + D+ G++ E + L+ GAD +S+ P Sbjct: 192 ---VVAEIVAATDLFVIANNGVRDRETVREYLACGADAVSVGRP 232 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 60/205 (29%), Gaps = 15/205 (7%) Query: 49 FYDITASSDGRVVDKSWV-SRVAEVIDIPFCVAGGIKSL--EDAAKILSFGADKISINSP 105 D ++ ++ + D P ++S E +I AD +I Sbjct: 56 VEDRDREEFLPANPFAFADEQLNRLADEPLVAGLNVRSASREPLERIAESCADHGAICE- 114 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 L + + + ++ D + RT + + L + Sbjct: 115 -LNAHCRQDEMCETGAGEALLAEPDRLAKQVETAADAGATVSVKVRTEIDGVDLLAVARR 173 Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 ++ GA + ++ M+ +GV + ++ + +IA+ G E E Sbjct: 174 IEAAGADAVHVDAMDSEGV--------VAEIVAATDLFVIANNGVRDRETVREYL-ACGA 224 Query: 226 DGALAASVFHKQIINIGELKAYLAT 250 D + + ++ Sbjct: 225 DAVSVGRPS-DRPAVLKRVRNATEG 248 >UniRef50_B7GBC4 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GBC4_PHATR Length = 323 Score = 57.0 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 18/232 (7%), Positives = 53/232 (22%), Gaps = 29/232 (12%) Query: 38 RYAEEGAD-----ELVFYDITASSDGRVVDKSWVSRVAE---------VIDIPFCVAGG- 82 + G D + ++ + + +AG Sbjct: 15 LCRQHGVDLTYTQMIHAKNLLGDNTFSKSHLDM-HEHRSLPPELKPFTNGPLMVQLAGNS 73 Query: 83 ----IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 +++ + D +N R + + A Sbjct: 74 VDMVLRAAQYVLDQTDGKVDGFDLNCGCPQGIARKGRYGAFLMEEDTD-LVCRILSALRQ 132 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV-- 196 + N + R VT + + ++ G + ++ + ++ Sbjct: 133 ELPANIAVSAKIRLPVTDEMLVARMPKLLDTGVDFMTIHGRTLHENKTKVRGVHTDRIRL 192 Query: 197 ------REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 ++ P++A+GG M +++ + Sbjct: 193 AIETVHKQRPGFPIVANGGVEHMPDVANLQARTGAVAVMSSESLLEFPNIFS 244 >UniRef50_Q466J2 NADH-dependent flavine oxidoreductase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q466J2_METBF Length = 325 Score = 57.0 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 12/144 (8%) Query: 5 RIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY--------DITA 54 +I+P + + +V D + AK + + G D L + Sbjct: 174 QILPEIRNNTPKNFIVSVRMGEYLPESKDGIEAAKAFEKAGIDLLHISFGMQPPANTVPD 233 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLI 113 + S + + + IP I++ E ++ D +++ LADP Sbjct: 234 GFICSPITYSGCK-IKKEVKIPVIAVNEIRTEEQVRFLIENDYVDLVAVGRGMLADPEFA 292 Query: 114 TRLADRFGVQCIVVGIDTWYDAET 137 + + V + ++ + Sbjct: 293 NHVINSEPVNTCLGCERCFWFTDH 316 Score = 45.9 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 63/238 (26%), Gaps = 14/238 (5%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGAD-ELVFYDITASSDGRVVDKSWVSRVAEVIDI 75 V + I + +A E GA + + D + + + + + Sbjct: 66 AVDSTGMWSAGDISALKQIASNCHEYGATVMMQLHCGN--MDINELSTEEIHSMQKNMKQ 123 Query: 76 PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 A I ++G + T + + + + + Sbjct: 124 AAIRACEIG-FNGVEFHFAYGFTLCKFLDASYNRRTDKYGGDVLYRARVLTQILPEIRNN 182 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN---QDGVRNGYDLEQ 192 + V+ G+ E + +K G + ++ + V +G+ Sbjct: 183 TPKNFIVSVRMGEYLPESKDGIEA---AKAFEKAGIDLLHISFGMQPPANTVPDGFICSP 239 Query: 193 L----KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + K+++ +P+IA T E + VD + Sbjct: 240 ITYSGCKIKKEVKIPVIAVNEIRTEEQVRFLIENDYVDLVAVGRGMLADPEFANHVIN 297 >UniRef50_A5EXU5 TRNA-dihydrouridine synthase A n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXU5_DICNV Length = 335 Score = 57.0 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 49/190 (25%), Gaps = 14/190 (7%) Query: 74 DIPFCVAGGIKS--LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + G A S+ ++++N +D ++ +V Sbjct: 61 PCALQLGGSNPDELARATAIAQSYHYAEMNLNVGCPSDRVQNNQIGACLMKSPRLVAQCL 120 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY--- 188 + V+ + Q Q+ +++ Sbjct: 121 TAMQKESDVPVSIKHRLGIDEQDEHLVFDFVDQISQESPCRIFIVHARKAWLSGLSPKEN 180 Query: 189 ------DLEQLKKVRE-VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 E + K++E + +I +GG + VDG + ++Q + Sbjct: 181 RTAPPLHYEIVYKIKEQFPELTIIINGGIDFIAACQNHLHY--VDGVMLGRAAYQQPQLL 238 Query: 242 GELKAYLATQ 251 +A Sbjct: 239 LAARALFGDA 248 >UniRef50_C0SE35 tRNA-dihydrouridine synthase B n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SE35_PARBP Length = 795 Score = 57.0 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 28/102 (27%), Gaps = 27/102 (26%) Query: 170 GAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCH--------------------------V 202 G I L+ ++ + D + + + V Sbjct: 521 GVAAITLHGRSRQQRYSRQADWGYIGQCAALVKRLNEQINSGTDTAKEADARYQSSAGKV 580 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + +G + + + R++ VD + A + E+ Sbjct: 581 FFLGNGDCYSHDDYFNGIRNSGVDTVMIARGALMKPWIFEEI 622 >UniRef50_Q01YA2 Dihydroorotate dehydrogenase n=5 Tax=Bacteria RepID=PYRD_SOLUE Length = 304 Score = 57.0 bits (136), Expect = 6e-07, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 26/127 (20%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD--------------ITASSDG-- 58 +VK + I PLA+ E GAD L + + G Sbjct: 162 PLIVKL-----SPNVSAIEPLARVAEESGADALSLVNTVISLAIDARTRRPRIGAGFGGL 216 Query: 59 -----RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + + +V + A + IP GGI + EDAA+ L GA + + + DP Sbjct: 217 SGPAIKPIALRFVYQAARAVRIPVIGLGGIATGEDAAEFLIAGASAVEVGTATFWDPRAP 276 Query: 114 TRLADRF 120 R+A+ Sbjct: 277 LRIAEEL 283 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 16/65 (24%), Gaps = 1/65 (1%) Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 L + + +P+I GG T E E A + + Sbjct: 222 KPIALRFVYQAARAVRIPVIGLGGIATGEDAAEFL-IAGASAVEVGTATFWDPRAPLRIA 280 Query: 246 AYLAT 250 L Sbjct: 281 EELGK 285 >UniRef50_A8ZX83 Dihydrouridine synthase DuS n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX83_DESOH Length = 324 Score = 56.7 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 19/173 (10%), Positives = 46/173 (26%), Gaps = 6/173 (3%) Query: 75 IPFCV-AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 +P + G + A + G + N P + + + + Sbjct: 64 VPQILSNSGEDFVYLADHLYDLGYSVTNWNLGCPY-PMVAKKYRGAGLLPHTDRIAEFLD 122 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQ 192 + T+ L + + + E++++ G DL Sbjct: 123 TVMSRMKGGLSVKIRLGWADTTELMGL--LPVLHRYPLAELIVHPRTGIQRYEGTVDLAA 180 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADV-DGALAASVFHKQIINIGEL 244 ++V E +P++ +G T+ F D + + Sbjct: 181 FERVLENTGLPVMYNGDIQTVADFAYLSGRFKAVDRWMIGRGALADPFLPAAI 233 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 5/130 (3%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVA 70 ++ G VK +++ L EL+ + T VD + RV Sbjct: 128 MKGGLSVKIRLGW--ADTTELMGLLPVLHRYPLAELIVHPRTGIQRYEGTVDLAAFERVL 185 Query: 71 EVIDIPFCVAGGIKSLEDAAK--ILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 E +P G I+++ D A D+ I ALADP L + + V Sbjct: 186 ENTGLPVMYNGDIQTVADFAYLSGRFKAVDRWMIGRGALADPFLPAAIGGSQPEEKEKVA 245 Query: 129 IDTWYDAETG 138 + + Sbjct: 246 RMRNFHDDLM 255 >UniRef50_D2MIW0 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MIW0_9BACT Length = 104 Score = 56.7 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 3/105 (2%) Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIAS 207 T V++ + +++ ++ +++DG+ G ++ L+ VPLIAS Sbjct: 1 MHGWTNVSESTAEPVLASLKEYPLAGVIFTEISRDGMLEGPNVAALRDAVRASPVPLIAS 60 Query: 208 GGAGTMEHFLEAFRDAD--VDGALAASVFHKQIINIGELKAYLAT 250 GG +E A + + G + ++ +++ A Sbjct: 61 GGVTRVEDI-RAIKRLGQKIIGVIVGKALYEGTLDLPAALAEARA 104 >UniRef50_Q5HJT5 Probable tRNA-dihydrouridine synthase n=92 Tax=Firmicutes RepID=DUS_STAAC Length = 328 Score = 56.7 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 32/97 (32%), Gaps = 6/97 (6%) Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQ-DGVRNGYDLEQLKKVRE-----VCHVPLIA 206 E DW++ V ++ + +++ + + + E ++ ++ + L Sbjct: 148 YYEIDEWKDWLKHVFEQDIANLSIHLRTRKEMSKVDAHWELIEAIKNLRDEIAPNTLLTI 207 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +G + LE +DG + + Sbjct: 208 NGDIPDRKTGLELAEKYGIDGVMIGRGIFHNPFAFEK 244 >UniRef50_P32382 NADH oxidase n=1 Tax=Thermoanaerobacter brockii RepID=NADO_THEBR Length = 651 Score = 56.7 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 32/281 (11%), Positives = 76/281 (27%), Gaps = 43/281 (15%) Query: 10 LDVRDGQVV--KGVQFRNHEIIGDIVPLAKRYAEEGADELV-FYDITASSDGRVVDKSWV 66 +D G+ V + + + + LA+ GA + + A + Sbjct: 64 VDYPQGKNVACQLRL-DDDKYMAGFFELAEAVHSYGAKIFMQIH--HAGRQTTPGITEGL 120 Query: 67 SRVAEVIDIPFCVAG---GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 VA +P G ++ + +I+ D A+ D + Q Sbjct: 121 QPVAPS-PVPCSFLGTQPRELTINEIEEIIQKFVDAAVRAKGAMFDGIELHGAHGYLIGQ 179 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRTR------------------------VTQWET 159 + + D G + E R T E Sbjct: 180 FMSPRTNRRVDKYGGSFERRMRFPLEIIRRIKEAVGEDYPISFRFSADEFVEGGNTLEEG 239 Query: 160 LDWVQEVQKRGAGEIVLNMMNQDGVR---------NGYDLEQLKKVREVCHVPLIASGGA 210 + +++ G + ++ + + G+ + +++++V ++P+I G Sbjct: 240 KQIAKMLEEAGVHVLHVSAGIYESMPTLLEPSRFEQGWRVYLAEEIKKVVNIPVITVGVI 299 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 E + + D + K + Sbjct: 300 REPEFAEKIIAEGRADFVAVGRGLIADPEWPKKAKEGRQNE 340 >UniRef50_B1HS08 2-nitropropane dioxygenase n=2 Tax=Bacillaceae RepID=B1HS08_LYSSC Length = 335 Score = 56.7 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 28/217 (12%), Positives = 56/217 (25%), Gaps = 21/217 (9%) Query: 34 PLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 E G + K ++ V ++ PF V ++ Sbjct: 24 KFVVACTEAG-----LLGSIGAGYLDGEQTKQFIQEVKKLTTKPFAVNLFVQEEPQIDIE 78 Query: 93 LSFGADKISINS------PALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + A + A + + V + Sbjct: 79 VLQKARMALQPFYDELGLSPVQSVVSKEVFAGQVQAVIEEKVKICSFTFGIPSAEVLKQL 138 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG--------YDLEQLKKVRE 198 + + TL+ Q V++ G +VL G R + L++V Sbjct: 139 KEHGVYTIGTATTLEEAQLVEQAGMDAVVLQGGEAGGHRGSFTAPLQLIPLYDLLQQVAG 198 Query: 199 VCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +P+IA+GG T + +A + + Sbjct: 199 KIAIPIIAAGGLVTKKDIQKALE-SGAQAVQVGTALL 234 Score = 47.4 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 10/90 (11%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVD---------KSWVSRVAEVIDIPFCVAGG 82 + A+ + G D +V + R + +VA I IP AGG Sbjct: 151 TLEEAQLVEQAGMDAVVLQGGE-AGGHRGSFTAPLQLIPLYDLLQQVAGKIAIPIIAAGG 209 Query: 83 IKSLEDAAKILSFGADKISINSPALADPTL 112 + + +D K L GA + + + L Sbjct: 210 LVTKKDIQKALESGAQAVQVGTALLVAEEC 239 >UniRef50_Q2FKX6 Tryptophan synthase alpha chain n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKX6_METHJ Length = 259 Score = 56.7 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 54/238 (22%), Gaps = 51/238 (21%) Query: 25 NHEIIGDIVPLAKRYAEEGADELV--------FYDIT----------ASSDGRVVDKSWV 66 + + K GAD + D AS V Sbjct: 23 GDPDFETSLEIIKALENGGADIIELGLPFSDPVADGPVIQQADQRALASGMNTDRFFDLV 82 Query: 67 SRVAEVIDIPF--------CVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLAD 118 V + DIP + I + G D + + + A+ Sbjct: 83 REVRKSSDIPLVVLTYTNLILQRDINTFYQ--DAADAGIDAVVVADLPYEEAGPYITAAE 140 Query: 119 RFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 GV +++ T K + + + Sbjct: 141 TAGVAPVMMVSTTTSPERLSKILTVKSGFIYL--------------------VAALGVTG 180 Query: 179 MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 M + + L ++ +P+ G E E DA D + S + Sbjct: 181 M--RQKTDPVAQKLLADLKNRTDIPIAPGFGISDREQVREW-TDAGADAVIVGSALVR 235 >UniRef50_C8WHP0 Dihydroorotate dehydrogenase family protein n=3 Tax=Bacteria RepID=C8WHP0_EGGLE Length = 356 Score = 56.7 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 26/136 (19%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD------------------ITA 54 + +VK + D+ +A+ GAD L + Sbjct: 212 KRPLIVKLT-----PNVTDVTEIARAAVSAGADALSLINTLLGMAIDAERRRPQLARGVG 266 Query: 55 SSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 G + V V V + +D+P GGI DA + + GA +++ + +P Sbjct: 267 GLSGPAVKPVALRMVWEVHQAVDVPLLGMGGISCATDAVEFMLAGATAVAVGTANFVNPH 326 Query: 112 LITRLADRFGVQCIVV 127 + D C Sbjct: 327 ATVEIIDGMAQYCERH 342 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 21/73 (28%), Gaps = 5/73 (6%) Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI----INI 241 L + +V + VPL+ GG +E A + I Sbjct: 274 KPVALRMVWEVHQAVDVPLLGMGGISCATDAVEFM-LAGATAVAVGTANFVNPHATVEII 332 Query: 242 GELKAYLATQGVE 254 + Y G+E Sbjct: 333 DGMAQYCERHGIE 345 >UniRef50_P32370 NADH-dependent flavin oxidoreductase n=4 Tax=Clostridium RepID=BAIH_EUBSP Length = 661 Score = 56.7 bits (135), Expect = 8e-07, Method: Composition-based stats. Identities = 19/194 (9%), Positives = 51/194 (26%), Gaps = 12/194 (6%) Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + + G SL A + G+ + + + + RF + Sbjct: 144 HDIIKQFGQAARRAEEAGCGAISLHCAHAYMLPGSFLSPLRNKRMDEYGGSLDNRARFVI 203 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-- 180 + I ++ + + L + + G + ++ Sbjct: 204 EMIEEARRNVSPDFPIFLRISGDERMVGG--NSLEDMLYLAPKFEAAGVSMLEVSGGTQY 261 Query: 181 --------QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 G ++ + ++++V +P+ A G + + E VDG Sbjct: 262 EGLEHIIPCQNKSRGVNVYEASEIKKVVGIPVYAVGKINDIRYAAEIVERGLVDGVAMGR 321 Query: 233 VFHKQIINIGELKA 246 + Sbjct: 322 PLLADPDLCKKAVE 335 >UniRef50_Q2NEG1 PyrD n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NEG1_METST Length = 306 Score = 56.3 bits (134), Expect = 9e-07, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 28/120 (23%) Query: 12 VRD-GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFY-------------------- 50 ++D +VK + DI +AK + GAD L Sbjct: 156 IKDVPIIVKLT-----PNVTDITEIAKAAEDAGADALTLINSVGPGLRIDYKTARPILNN 210 Query: 51 --DITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 A + + V + E +DIP GGI++ +DA + L GA + I + + Sbjct: 211 VFGGIAGPMIKPIALKCVYKTYETVDIPLFGVGGIRTYKDALEFLYAGASLLQIGTSIMY 270 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 2/74 (2%) Query: 178 MMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF-HK 236 + L+ + K E +PL GG T + LE A + ++ Sbjct: 213 GGIAGPMIKPIALKCVYKTYETVDIPLFGVGGIRTYKDALEFL-YAGASLLQIGTSIMYE 271 Query: 237 QIINIGELKAYLAT 250 + L+ Sbjct: 272 GPEIFKNITHDLSN 285 >UniRef50_B7GNV1 N-acylglucosamine-6-phosphate 2-epimerase n=10 Tax=Actinobacteria (class) RepID=B7GNV1_BIFLI Length = 231 Score = 56.3 bits (134), Expect = 9e-07, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 65/237 (27%), Gaps = 45/237 (18%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 +D G ++ Q E + +A+ V A+ + + +S + Sbjct: 12 IDSLHGTLIVSCQAYPGEPMRHPETMAQVAQS------VVIGGAAAIRCQG--LADISAI 63 Query: 70 AEVIDIPFCV-----AGGIK---SLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + +P G+ +L A + GAD +++++ P +T Sbjct: 64 KGQVKVPVIGIWKEGDNGVYITPTLRHARACIMAGADIVALDATDRPRPDGLT------- 116 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN---M 178 + E + ++ G I Sbjct: 117 -----------------LQQTARQLKSEGAILMADCGCIEDSDAAVDAGFDIISTTLAGY 159 Query: 179 MNQDGVRNGYDLEQLKK-VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + G D E L + + HVP+I G T +A A+ + Sbjct: 160 TDSRAKTEGPDYELLAQMLERHPHVPVICEGRIHTPSDAAKAIE-MGAWAAVVGTAI 215 >UniRef50_Q1GF08 L-lactate dehydrogenase (Cytochrome) n=10 Tax=Rhodobacteraceae RepID=Q1GF08_SILST Length = 389 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 34/152 (22%), Gaps = 4/152 (2%) Query: 88 DAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI--DTWYDAETGKYHVNQY 145 + G + + + + + A Y Sbjct: 194 AIRPAWALGMARQHRGEGGMPHMRTLDKYIEGAASALSSTAHIGYLLRTAPDWAYLEWLR 253 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL-EQLKKVREVCHVPL 204 E V ++ GA I ++ E L+ +R +PL Sbjct: 254 DHWEGPLVVKGVLDACDAPRLEAAGADAIWISNHAGRQFDAAPAPIEVLEDIRAATTLPL 313 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 I G L A D + +H Sbjct: 314 ILDSGIEGGLDILRAL-ALGADFVMLGRAWHY 344 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 32/112 (28%), Gaps = 10/112 (8%) Query: 14 DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEV 72 VVKGV D A R GAD + + D + + Sbjct: 258 GPLVVKGVL--------DACD-APRLEAAGADAIWISNHAGRQFDAAPAPIEVLEDIRAA 308 Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 +P + GI+ D + L+ GAD + + + Sbjct: 309 TTLPLILDSGIEGGLDILRALALGADFVMLGRAWHYALAALGAAGPAHLHDI 360 >UniRef50_Q6MQA5 2-nitropropane dioxygenase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQA5_BDEBA Length = 341 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 51/199 (25%), Gaps = 18/199 (9%) Query: 54 ASSDGRVVDKSW-VSRVAEVIDIPFCVAGGIKSLEDA-------AKILSFGADKISINSP 105 + + +V + PF V I + K L + Sbjct: 41 GAGYMSPDSLRLLIQKVKNLTTRPFAVNLFIPTSPAVDLLQVERMKKLLLPFYRELGMDS 100 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE 165 +F V + K + + +L+ + Sbjct: 101 VPELSYDPDLFQKQFAVVLEEKVPAFSFTFGCLKPSEMAALKSLNVFVMGTATSLEEAEY 160 Query: 166 VQKRGAGEIVLNMMNQDGVRNG---------YDLEQLKKVREVCHVPLIASGGAGTMEHF 216 +QK+G +V + G R ++++ E +P+IA+GG + Sbjct: 161 LQKQGCDAVVAQGLEAGGHRGSFLDGKFPLLPAKNLVQEISERFQIPVIAAGGIVSKADM 220 Query: 217 LEAFRDADVDGALAASVFH 235 A + F Sbjct: 221 QTML-SAGAVAVQIGTAFL 238 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 11/88 (12%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKS----------WVSRVAEVIDIPFCVAGG 82 + A+ ++G D +V + + R V ++E IP AGG Sbjct: 155 LEEAEYLQKQGCDAVVAQGLE-AGGHRGSFLDGKFPLLPAKNLVQEISERFQIPVIAAGG 213 Query: 83 IKSLEDAAKILSFGADKISINSPALADP 110 I S D +LS GA + I + L Sbjct: 214 IVSKADMQTMLSAGAVAVQIGTAFLVCH 241 >UniRef50_A0AMC4 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=65 Tax=Bacteria RepID=NANE_LISW6 Length = 236 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 29/249 (11%), Positives = 60/249 (24%), Gaps = 31/249 (12%) Query: 12 VRDGQVVKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 ++ G VV N + + +A + GA + R + + Sbjct: 9 IKGGLVVSCQALSNEPLHSSFIMSKMALAAVQSGAVGI-----------RANTTKDIKAI 57 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 E +D+P K G++ + + + Sbjct: 58 EEQVDVPIIG---------IFKNEYEGSEVFITPTYKEVKEICESGAQIVAMDATTRLRP 108 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 E K ++ + E + + + G I + G + Sbjct: 109 HGEKLDEIIKTVRKEFPNILLMADTSSLEDVKYADAL---GFDFIGTTLYGYTEATTGKN 165 Query: 190 -----LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 LK+V + P+IA G T E E + + Sbjct: 166 ISDNQFAYLKEVLKSTTTPIIAEGKIDTPEKAREVL-ALGCYSVVVGGAITRPQEITKRF 224 Query: 245 KAYLATQGV 253 + + Sbjct: 225 INEMKKDHL 233 >UniRef50_C4G9N4 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9N4_9FIRM Length = 338 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 10/91 (10%), Positives = 29/91 (31%), Gaps = 8/91 (8%) Query: 163 VQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 ++ ++++ +G D + K E ++P+ +G T E + Sbjct: 172 MRVYTMYPIARLMIHARVGRAAYSGMPDQDSFCKALEKNNLPVSYNGDILTPEDGEKILV 231 Query: 222 DA-------DVDGALAASVFHKQIINIGELK 245 A +G + + +++ Sbjct: 232 RAEGHDLQKHFNGLMLGRGVLRDPALFRKVR 262 Score = 42.8 bits (99), Expect = 0.011, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 5/99 (5%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVA 70 + VK E G++ L + Y L+ + ++ + D+ + Sbjct: 150 IPVRISVKTRLG--MEDAGEMEDLMRVYTMYPIARLMIHARVGRAAYSGMPDQDSFCKAL 207 Query: 71 EVIDIPFCVAGGIKSLEDAAKIL--SFGADKISINSPAL 107 E ++P G I + ED KIL + G D + + Sbjct: 208 EKNNLPVSYNGDILTPEDGEKILVRAEGHDLQKHFNGLM 246 >UniRef50_A5N0D9 Predicted enoate reductase n=2 Tax=Clostridium kluyveri RepID=A5N0D9_CLOK5 Length = 704 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 10/160 (6%) Query: 29 IGDIVPLAKRYAEEGADELVFY--------DITASSDGRVVDKSWV-SRVAEVIDIPFCV 79 + D V +AK GAD + IT + + ++ V + + IP Sbjct: 289 LNDGVEIAKSLEAYGADAINVTTGNSDTQFMITEPISFQPGWRKYLSKAVKDAVHIPVIS 348 Query: 80 AGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 G I++ E A ++L G D I + P LADP + + + Sbjct: 349 VGVIRTPEQAEQLLLEGDQDFIGLARPLLADPDWAVKAKNGDSRNIQRCIGCLYCMESYE 408 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM 178 + +N + + + ET + +IV+ Sbjct: 409 RNIINGLPVNCAVNPRSCQETKYTKIGEKNGDGRQIVIVG 448 Score = 51.3 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 57/227 (25%), Gaps = 43/227 (18%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED 88 IG + AKR + GAD + + + + + + Sbjct: 196 IGQFIKAAKRAQQSGADGVELHAGHG----------------------YLLNQFLSPYTN 233 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGD 148 + R+ + + D Sbjct: 234 IR------------SDEYGGSFENRLRIMKELIEGIHRECSADFPISVRLTVDEFYEKID 281 Query: 149 ESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN---------GYDLEQLKKVREV 199 + + ++ + ++ GA I + N D G+ K V++ Sbjct: 282 YPEQGLHLNDGVEIAKSLEAYGADAINVTTGNSDTQFMITEPISFQPGWRKYLSKAVKDA 341 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 H+P+I+ G T E + + D D A + K Sbjct: 342 VHIPVISVGVIRTPEQAEQLLLEGDQDFIGLARPLLADPDWAVKAKN 388 >UniRef50_A1BHW3 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=Chlorobiaceae RepID=A1BHW3_CHLPD Length = 411 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 26/59 (44%) Query: 188 YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 Y+LE + +++ +P+IA GG TME D + F + + +L+ Sbjct: 310 YNLEVARAIKKAVSIPVIAVGGIHTMEDISAVLVSGAADFVAMSRPFIIEPDIVRKLRE 368 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 47/168 (27%), Gaps = 46/168 (27%) Query: 30 GDIVPLAKRYAEEGADELVFYDIT-----ASSDG-------------------------- 58 + V +A+ G + T + G Sbjct: 234 EEAVDIARLLEASGCSAIEVSSGTIEEGLSIMRGPKLPVEPILACNFRFKSMPVPLKKVL 293 Query: 59 --------------RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISIN 103 R + + + + IP GGI ++ED + +L G AD ++++ Sbjct: 294 APLLPLVMPFPDLIRNYNLEVARAIKKAVSIPVIAVGGIHTMEDISAVLVSGAADFVAMS 353 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 P + +P ++ +L + + + + Y Sbjct: 354 RPFIIEPDIVRKLREGSQTESRCIACNYCAIMIEEGPLRCWYGKMPGM 401 >UniRef50_B7APY3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APY3_9BACE Length = 321 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 16/189 (8%), Positives = 54/189 (28%), Gaps = 9/189 (4%) Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 G + + ++ I++L D +G D++++N + + Sbjct: 62 GNNRPRDVIPQILSNNSCDCIKV--IRALHD-----EYGYDEVNLNLGCPSPTVVTKHKG 114 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 F + + + + E + + + E++++ Sbjct: 115 AGFLAFPDKLDSFLNDVFVAAGKDGVRVSVKTRTGVESHDEFIKILDIYNQYPLSELIVH 174 Query: 178 MM-NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAF-RDADVDGALAASVFH 235 +D +N D + + P+ +G +++ + R ++ + Sbjct: 175 PRVQKDLYKNSPDYDIFEYAYTNSKAPVCYNGDICSVDDYQRITSRFNGLNAVMCGRGMI 234 Query: 236 KQIINIGEL 244 + Sbjct: 235 TNPAIFATI 243 Score = 42.0 bits (97), Expect = 0.020, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 45/192 (23%), Gaps = 15/192 (7%) Query: 13 RDGQ--VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRV 69 +DG VK + + + Y + EL+ + D Sbjct: 137 KDGVRVSVKTRTGVESHD--EFIKILDIYNQYPLSELIVHPRVQKDLYKNSPDYDIFEYA 194 Query: 70 AEVIDIPFCVAGGIKSLEDAAKI--LSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 P C G I S++D +I G + + + +P + + Sbjct: 195 YTNSKAPVCYNGDICSVDDYQRITSRFNGLNAVMCGRGMITNPAIFATINGG------DK 248 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN--QDGVR 185 R + + + L + GA ++ + Sbjct: 249 LSSRALRTFHNAVFKEYCAVMGERNALFKMKELWYYMIRNFDGADRYYKSIRKAQRRCDY 308 Query: 186 NGYDLEQLKKVR 197 E Sbjct: 309 EAAVNELFANCA 320 >UniRef50_C8W700 Dihydroorotate dehydrogenase family protein n=2 Tax=Atopobium RepID=C8W700_ATOPD Length = 308 Score = 55.9 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 21/125 (16%) Query: 31 DIVPLAKRYAEEGADELV-----------FYDI-------TASSDG---RVVDKSWVSRV 69 ++ + K + EGAD L + T G V Sbjct: 177 NVAEIGKAFEAEGADGLTLINSIPGMSINVHTRKSRLSKPTGGLSGPLCHNAAVRMVWEC 236 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 A+ + IP C GG+++ EDAA+ + GA +S+ S L DP R+ + G+ Sbjct: 237 AQAVSIPICGVGGVETGEDAAEFILAGATAVSVGSANLYDPMCAPRILNELTDWAKSQGV 296 Query: 130 DTWYD 134 ++ Sbjct: 297 SDIHE 301 Score = 48.2 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 5/66 (7%) Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII----NIGELKAY 247 + + + +P+ GG T E E A S + + EL + Sbjct: 232 MVWECAQAVSIPICGVGGVETGEDAAEFI-LAGATAVSVGSANLYDPMCAPRILNELTDW 290 Query: 248 LATQGV 253 +QGV Sbjct: 291 AKSQGV 296 >UniRef50_C6W0Z1 Geranylgeranylglyceryl phosphate synthase n=2 Tax=Flexibacteraceae RepID=C6W0Z1_DYAFD Length = 257 Score = 55.9 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 3/86 (3%) Query: 167 QKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVD 226 + G I L+ + E + VR P+I GG + E A R A D Sbjct: 169 EYLGLKNIFLDAGSGAQFPVPA--ETIAAVRGTVDTPIIVGGGIDSYEKADNALR-AGAD 225 Query: 227 GALAASVFHKQIINIGELKAYLATQG 252 + + + E+ A + Sbjct: 226 VIVVGNGIEANPELLPEVAACVRAHN 251 Score = 43.9 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 2/88 (2%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF 95 A G + + + ++ V +D P V GGI S E A L Sbjct: 165 ALAGEYLGLKNIFLDAGSGAQFPVPA--ETIAAVRGTVDTPIIVGGGIDSYEKADNALRA 222 Query: 96 GADKISINSPALADPTLITRLADRFGVQ 123 GAD I + + A+P L+ +A Sbjct: 223 GADVIVVGNGIEANPELLPEVAACVRAH 250 >UniRef50_A2QAU6 tRNA-dihydrouridine synthase 3 n=6 Tax=Leotiomyceta RepID=DUS3_ASPNC Length = 748 Score = 55.9 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 28/276 (10%), Positives = 54/276 (19%), Gaps = 66/276 (23%) Query: 37 KRYAEEGADELV--FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAG-GIKSLEDAAKIL 93 + E GA G + + + + P + G I D +K + Sbjct: 354 RLCVELGAQFTYSEMAMSLPLIQGNKSEWALMRAHESEMLPPTMLPGADIVQGYDNSKDM 413 Query: 94 SFGA------------------------DKISINSPALADPTLITRLADRFGVQCIVVGI 129 FGA I +N D + Sbjct: 414 KFGAQIAANKPWQAFKATEALAKVTPNLRVIDLNCGCPIDLVFKDGAGSALLEHPSKLEK 473 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQW------------ETLDWVQEVQKRGAGEIVLN 177 + GA I L+ Sbjct: 474 IIRGMNTVSDQIPITVKIRMGTKDNNPNALKLTERLLLGGYETSLLHHDGAAGAAAITLH 533 Query: 178 MMNQDGVRNG-YDLEQLKKVREVCH--------------------------VPLIASGGA 210 ++ D E + + + V + +G Sbjct: 534 GRSRQQRYTRQADWEYISECAALIKRLNEKTDAVTDTIREPDARTQPNGGKVYFLGNGDC 593 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 + + +A VD + + E++A Sbjct: 594 YSHVDYDNHINNAGVDAVMLGRGPLIKPWLFEEIQA 629 >UniRef50_UPI000038242A COG0042: tRNA-dihydrouridine synthase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI000038242A Length = 182 Score = 55.9 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 9/97 (9%), Positives = 30/97 (30%), Gaps = 12/97 (12%) Query: 170 GAGEIVLNMMNQDGVRNGY---------DLEQLKKVREV-CHVPLIASGGAGTMEHFLEA 219 G ++++ D ++ +++ ++P+ +GG + Sbjct: 9 GXDGLIVHARKAWLKGLSPRENRDVPPLDYGRVARLKAAHPNLPIAINGGIADLSAAKAR 68 Query: 220 FRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + VDG + + + + L + + Sbjct: 69 LAE--VDGVMMGRAAYTDPALLLAVDPELFGEPPPVA 103 >UniRef50_A1VTD5 NADH:flavin oxidoreductase/NADH oxidase n=2 Tax=Proteobacteria RepID=A1VTD5_POLNA Length = 822 Score = 55.9 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 6/129 (4%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDI-----TASSDGRVVDKSWVSRVAEVIDIPFCV 79 D V +A+ + G D + GR+ + R+ I Sbjct: 690 GGNTGDDAVAIARLFKAAGCDFIDVSSGQTTRAARPVYGRMYQTPFADRIRNEAGIQTIA 749 Query: 80 AGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 G I ++ I++ G AD +I P LADP A + + + + Sbjct: 750 VGAISEVDHVNSIIAAGRADLCAIARPHLADPAWTLHEAAKLQSRHVQWPQPYLSGRDQL 809 Query: 139 KYHVNQYTG 147 +++ Sbjct: 810 YREISKQNK 818 >UniRef50_A6LJ97 Dihydroorotate dehydrogenase family protein n=2 Tax=Thermosipho RepID=A6LJ97_THEM4 Length = 360 Score = 55.9 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 55/194 (28%), Gaps = 10/194 (5%) Query: 64 SWVSRVAEVIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 + ++ + P V+ G I+ +E L+ AD I++ + + Sbjct: 82 EILPKLKNELKKPLIVSVGYTIEDMEILIPQLNEYADAFEISTHYVGKDYNTIANIVKAI 141 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ 181 + I T E+ + ++ Sbjct: 142 RKNTNKPIFMKLSPHIPDPVEFTKTILENGANGIVAINSWGPTMKIDIKNRKTLIGNEKG 201 Query: 182 DGVRNGYDLEQL-----KKVREV-CHVPLIASGGAGTMEHFLEAFRDADVDGA-LAASVF 234 +G ++ + K +R+ + +I GG + E +E + D L +S Sbjct: 202 QVWLSGPVIKPIALSIVKTIRDAFPDITIIGVGGIKSAEDVIEFL-LSGADAVQLLSSAL 260 Query: 235 HKQIINIGELKAYL 248 ++ L Sbjct: 261 IFGKDIYEKILNQL 274 >UniRef50_A1X3A1 Putative NADH:flavin oxidoreductase n=2 Tax=Anaerostipes caccae RepID=A1X3A1_9FIRM Length = 357 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 52/168 (30%), Gaps = 25/168 (14%) Query: 3 AKRIIPCLDVRDGQ--------VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI-- 52 R+ LD+ +G ++ + + +A + + G D L Sbjct: 191 RMRV--VLDIMEGIRHSCGENFLISVRLGFDEPDLESSAFMAGTFEKAGMDFLHVSTGFG 248 Query: 53 ------TASSDGRVVDKSW-VS-----RVAEVIDIPFCVAGGIKSLEDAAKILSF-GADK 99 + + + + + ++ + + P GGI+ ++ +L AD Sbjct: 249 STGFMDERTMENPPDEFPFNIRIWGAMQMKQRVSCPVIAVGGIRQVQQGMFLLEQECADF 308 Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTG 147 +++ L DP + ++ + + + K + Sbjct: 309 VALGRALLCDPEWVIKIKQGREIVSCRNCRKCLWSTDYHKCPGWREYH 356 Score = 48.2 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 46/182 (25%), Gaps = 22/182 (12%) Query: 87 EDAAKILSFGADKISINSPALADPT--------LITRLADRFGVQCIVVGIDTWYDAETG 138 E A + + G D + ++ T + V +D Sbjct: 146 EAAVRARAAGYDGVELHCAHSYFLNAFLSPTVNHRTDRFGGNIEGRMRVVLDIMEGIRHS 205 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNM-------MNQDGVRNGYDL- 190 + + +K G + ++ M++ + N D Sbjct: 206 CGENFLISVRLGFDEPDLESSAFMAGTFEKAGMDFLHVSTGFGSTGFMDERTMENPPDEF 265 Query: 191 ------EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 ++++ P+IA GG ++ + D + ++ Sbjct: 266 PFNIRIWGAMQMKQRVSCPVIAVGGIRQVQQGMFLLEQECADFVALGRALLCDPEWVIKI 325 Query: 245 KA 246 K Sbjct: 326 KQ 327 >UniRef50_A4ECL7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECL7_9ACTN Length = 302 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 23/115 (20%) Query: 31 DIVPLAKRYAEEGADELVFY----------------------DITASSDGRVVDKSWVSR 68 ++ +AK GAD L ++ + V Sbjct: 171 NVAEIAKALEAAGADGLSVINSIQGMAIDVHTRKSRVAKPKGGLSGPLCHHIA-VRMVWE 229 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 VA+ +DIP GG+ + EDAA+ + GA +S+ DP ++A Sbjct: 230 VAQAVDIPINGVGGVMTGEDAAEFILAGATCVSVGMANFVDPCASLKIAHELEAW 284 Score = 41.2 bits (95), Expect = 0.030, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 18/65 (27%), Gaps = 1/65 (1%) Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 + + + +V + +P+ GG T E E A ++ Sbjct: 220 HHIAVRMVWEVAQAVDIPINGVGGVMTGEDAAEFI-LAGATCVSVGMANFVDPCASLKIA 278 Query: 246 AYLAT 250 L Sbjct: 279 HELEA 283 >UniRef50_A8AAQ2 Photosystem I assembly BtpA n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AAQ2_IGNH4 Length = 268 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 70/246 (28%), Gaps = 29/246 (11%) Query: 22 QFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWV-----SRVAEVIDIP 76 +I V AK + G D ++ + + +V +RV + Sbjct: 19 GGDFDAVIERAVKDAKALEKGGVDAIIIENF--MDYPFPIRVDYVTVAAATRVVTEVVRS 76 Query: 77 FCVAGGI-----KSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 ++ G+ + E A L+ GA + N L V+ Sbjct: 77 LELSAGVSLLRNSAPEAIAVALASGAKFVRSNQWCWTSDAPEGLLTPVAREGLEVMRRWG 136 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLE 191 V R + L A + ++ + D Sbjct: 137 AKVGVVADVRVKHAAPISGRDLCDEARDLGGRCR-----ADALAVSG---AATGSEADPR 188 Query: 192 QLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS-----VFHKQIINIGELKA 246 QL+ V+ P++ + G T E+ + A DG + + + +++ ++ Sbjct: 189 QLEVVKTCTPKPVLVASGI-TPENVVRF---ASADGVIVGTYFKEGGVTENPVDVHRVRK 244 Query: 247 YLATQG 252 + Sbjct: 245 LVDAAK 250 >UniRef50_C1XQE2 Indole-3-glycerol phosphate synthase n=3 Tax=Deinococci RepID=C1XQE2_9DEIN Length = 260 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 30/228 (13%), Positives = 66/228 (28%), Gaps = 41/228 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 D +A++YAE GA + +T D+ + +V +++P A Sbjct: 67 DPAQVARQYAEGGARAISV--LTEPHYFAGSDQD-LRKVRGAVNLPLLRKDFTVHPYQLA 123 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 + S GA + L + + Sbjct: 124 EARSLGASAALLIVAVLREE----------------------------TASFLEAAHQAG 155 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP-----LI 205 + + ++ + GA + +N + +LE ++ + L+ Sbjct: 156 IEALVEVHDEAELEIALEAGATILGINNRD--LTTLEINLETAPRLGRLARQRGYSGLLV 213 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGV 253 A G G E + + D L + + + + L +G+ Sbjct: 214 AESGYGRKEEIVPL--EGLFDAVLVGTSLARSG-SWRQAVEVLMGRGI 258 >UniRef50_B9SRY4 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9SRY4_RICCO Length = 272 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 62/268 (23%), Gaps = 65/268 (24%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGD---------------IVPLAKRYAEEGADEL 47 A R PC+D+ G+ VK + + A Y E+G Sbjct: 46 AVRFRPCIDIHKGK-VKQIVGSTLRDSKEEDGSILVTNFVSDKSAAEFANLYEEDGLLGG 104 Query: 48 VFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 + A + + V GGI ++++ + GA + + S Sbjct: 105 HVIMLGADPLSKAAAFEAL----HAYPGGLQVGGGI-NVDNCLSYVEEGASHVIVTSYVF 159 Query: 108 ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + + + Sbjct: 160 NNGQMDLERLKDLVHVVGKQRLVLDLSCRKKAEKI------------------------- 194 Query: 168 KRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDAD--V 225 R G D E + + +P+ +GG M V Sbjct: 195 --------------SNTRLGIDEELVALLGMHSPIPVTYAGGVTVMNDLERIKTAGKGRV 240 Query: 226 DGALAASVF--HKQIINIGELKAYLATQ 251 D S + ++ A+ Q Sbjct: 241 D-VTVGSALDIFGGSLLYRDVVAWHKEQ 267 >UniRef50_Q2C3Y8 Putative oxidoreductase protein n=3 Tax=Gammaproteobacteria RepID=Q2C3Y8_9GAMM Length = 343 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 11/81 (13%) Query: 165 EVQKRGAGEIVLNMMNQDGVR----------NGYDLEQLKKVREVCHVPLIASGGAGTME 214 ++K GA I+ + G R +E L ++ VP++A+GG G+ + Sbjct: 162 WLEKHGADIIIAQGVEAGGHRAMFLTNDLNSQMPTVELLLALQSHVSVPIVAAGGIGSKD 221 Query: 215 HFLEAFRDADVDGALAASVFH 235 + + G + F Sbjct: 222 DIRK-LVELGSSGVQVGTAFL 241 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 10/88 (11%) Query: 32 IVPLAKRYAEEGADELVFYD----------ITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + A + GAD ++ +T + ++ + + + +P AG Sbjct: 156 TLEEAIWLEKHGADIIIAQGVEAGGHRAMFLTNDLNSQMPTVELLLALQSHVSVPIVAAG 215 Query: 82 GIKSLEDAAKILSFGADKISINSPALAD 109 GI S +D K++ G+ + + + L Sbjct: 216 GIGSKDDIRKLVELGSSGVQVGTAFLLC 243 >UniRef50_A2R0D9 Catalytic activity: n=20 Tax=cellular organisms RepID=A2R0D9_ASPNC Length = 403 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 54/214 (25%), Gaps = 22/214 (10%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 + L KR + G LV T S R D +PF G Sbjct: 156 RDDDITLSLLKRAKDNGFSVLVVTLDTWSLAWRPADLD-------NAYVPFIRGVGNT-- 206 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 G + + T D G + + + Sbjct: 207 --------LGFT-DPVFRSKFEKESGSTVEEDIVGASKAWISQVFYGQPHAWEQIAFLRK 257 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH--VP 203 + + + +D + + G IV++ V LE L ++ + + Sbjct: 258 NWDGPLVLKGIQHVDDAKLALEAGCDGIVVSNHGGRQVDGAIGSLEVLPEIVDAVGGKMT 317 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 ++ G T ++A D L Sbjct: 318 VLFDSGVRTGADIIKALC-LGADAVLVGRPVIYG 350 >UniRef50_A7I924 Histidine biosynthesis n=3 Tax=Methanomicrobiales RepID=A7I924_METB6 Length = 238 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 30/250 (12%), Positives = 65/250 (26%), Gaps = 34/250 (13%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEI------IGDIVPLAKRYAEEGADELVFYDITASS 56 ++ LD++ VV G + + L D+ Sbjct: 13 TMELVLALDLQHNMVVHGKSGQRATYKPLDWGLSPTAEPIGFVKATAPKFLYIADLDR-I 71 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRL 116 +G+ + + A++++ + V G+++ D L P L + Sbjct: 72 EGKGNHDALIRGCADLVERCY-VDRGVQTPSDL-----------------LTGPHLKNII 113 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVL 176 + + + + V + G Sbjct: 114 GTETSLAKLSQYHGGYLSIDVMNGKVIPTGDSPESVLREARGWDFEGCILLNLGFVG--- 170 Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 G L R L+ GG + + ++A DGA+ A+ HK Sbjct: 171 -----TENGIGEGTGPLAAWRSAYPGRLLYGGGVASPADL-DTIKNAGFDGAIIATALHK 224 Query: 237 QIINIGELKA 246 + ++ Sbjct: 225 GAVPAEAIRR 234 >UniRef50_C7PJL9 2-nitropropane dioxygenase NPD n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJL9_CHIPD Length = 353 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 26/227 (11%), Positives = 61/227 (26%), Gaps = 25/227 (11%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIK--------SL 86 +A + G L ++ + + + + PF V Sbjct: 32 VAAVAEKGGLGSLPVGGLS-----PDRTRELIRKTKSLTAKPFAVNLFTNGVPDYSRADA 86 Query: 87 EDAAKILSFGADKISINSPALA-DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E L + + + L+ D ++ + + Sbjct: 87 EAMQDFLEAFSKENQLGFERLSLDALRFYSYKEQIDILIAEAIPVVSFTFGIPDAESMTA 146 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ----------LKK 195 + V ++ V+K GA +V + G R + ++ + + Sbjct: 147 LKQKGIVLVGTATSVQEAVLVEKAGADAVVAQGIEAGGHRGSFLDDEPLPMVGTFVLVPE 206 Query: 196 VREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +P+IA+GG AF+ + F ++ Sbjct: 207 IVAHVKIPVIAAGGIRGGSTIRAAFQ-LGAKAVQIGTAFIASQESLA 252 Score = 47.0 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 27/86 (31%), Gaps = 12/86 (13%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKS-----------WVSRVAEVIDIPFCVAG 81 V A + GAD +V I + R V + + IP AG Sbjct: 161 VQEAVLVEKAGADAVVAQGIE-AGGHRGSFLDDEPLPMVGTFVLVPEIVAHVKIPVIAAG 219 Query: 82 GIKSLEDAAKILSFGADKISINSPAL 107 GI+ GA + I + + Sbjct: 220 GIRGGSTIRAAFQLGAKAVQIGTAFI 245 >UniRef50_Q1MQG1 Dihydroorotate dehydrogenase n=2 Tax=Deltaproteobacteria RepID=Q1MQG1_LAWIP Length = 314 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 26/133 (19%) Query: 14 DGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADEL---------------------VFYDI 52 +VK + DI +AK GAD + Sbjct: 170 KPVMVKL-----SPNVTDITIIAKAVESAGADAISCINTLTGMAVDIRKRKSLLSTVIGG 224 Query: 53 TASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTL 112 + + + V V + ++IP GGI S D + + GA + I + P + Sbjct: 225 LSGPGIKPIALRCVWEVCKAVNIPVIGIGGITSARDVLEFILVGAHAVQIGTMNFIQPDI 284 Query: 113 ITRLADRFGVQCI 125 R+A+ + C Sbjct: 285 AFRIAEALPIICN 297 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 1/63 (1%) Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 L + +V + ++P+I GG + LE ++ Q + Sbjct: 231 KPIALRCVWEVCKAVNIPVIGIGGITSARDVLEFI-LVGAHAVQIGTMNFIQPDIAFRIA 289 Query: 246 AYL 248 L Sbjct: 290 EAL 292 >UniRef50_A5F2I8 Putative uncharacterized protein n=2 Tax=Vibrio cholerae RepID=A5F2I8_VIBC3 Length = 157 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 2/73 (2%) Query: 176 LNMMNQDGVR--NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 ++ + G + + ++R+ C +PLIA+G + VD + Sbjct: 1 MHARTKAGGYKASEIKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRG 60 Query: 234 FHKQIINIGELKA 246 +K Sbjct: 61 ALNVPNLGNVVKH 73 >UniRef50_C9RMC2 Dihydrouridine synthase DuS n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMC2_FIBSS Length = 330 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 53/183 (28%), Gaps = 6/183 (3%) Query: 71 EVIDIPFCVAGGIKSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 +IP +A + + A +++ G +I N + V Sbjct: 69 NAREIPQIIANSVDEFKILADALIAKGYTEIDFNMGCPFPMQVNRHRGAGILNDKQTVQE 128 Query: 130 DT---WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + +++ + T E + + + +I L+ Sbjct: 129 IMDEIRKISNANGTAPVKFSVKMRLGQDTPDEAFAILPILNEAPLSQITLHPRLGKQQYK 188 Query: 187 G-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEA-FRDADVDGALAASVFHKQIINIGEL 244 G D + +K E C PL+ +G ++ E R + G + + + Sbjct: 189 GTIDFKSFEKFYEECRHPLVYNGDITSVSQICEMERRYPKLAGVMIGRGMLARPSMAADY 248 Query: 245 KAY 247 K Sbjct: 249 KEL 251 Score = 53.2 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 14/157 (8%), Positives = 39/157 (24%), Gaps = 5/157 (3%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVI 73 VK ++ + + E ++ + + +D + E Sbjct: 146 KFSVKMRLGQDTPD--EAFAILPILNEAPLSQITLHPRLGKQQYKGTIDFKSFEKFYEEC 203 Query: 74 DIPFCVAGGIKSLEDAAKILSFGAD--KISINSPALADPTLITRLADRFGVQCIVVGIDT 131 P G I S+ ++ + I LA P++ + + C Sbjct: 204 RHPLVYNGDITSVSQICEMERRYPKLAGVMIGRGMLARPSMAADYKELRDINCADPQDFL 263 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 + + + + + ++ Sbjct: 264 RKLFQMHQIIFDHACKTYQGDSQILSHVQSFWEYLEP 300 >UniRef50_B0KBD0 NADH:flavin oxidoreductase/NADH oxidase n=11 Tax=Thermoanaerobacteraceae RepID=B0KBD0_THEP3 Length = 641 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 11/117 (9%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDG----------RVVDKSWVSRVAEVIDIPFC 78 + D + LAK ++G + ++ G + + + S++ + ++IP Sbjct: 230 LEDAIRLAKILEDKGVAAIDVSLGSSCESGAITLQTLGTQKGLAWEFASKIKKQVNIPVI 289 Query: 79 VAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYD 134 G I + E A +IL G AD +++ P +ADP + + + Sbjct: 290 AVGRINTPELAEEILVSGKADLVALGRPLVADPLFVEKATSGRSKEIRRCAACHQGC 346 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 10/89 (11%) Query: 166 VQKRGAGEIVLNMMNQDGVR----------NGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 ++ +G I +++ + G E K+++ ++P+IA G T E Sbjct: 240 LEDKGVAAIDVSLGSSCESGAITLQTLGTQKGLAWEFASKIKKQVNIPVIAVGRINTPEL 299 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGEL 244 E D + + + Sbjct: 300 AEEILVSGKADLVALGRPLVADPLFVEKA 328 >UniRef50_C6IIM3 Dihydrouridine synthase n=15 Tax=Bacteroides RepID=C6IIM3_9BACE Length = 314 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 2/75 (2%) Query: 174 IVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEA-FRDADVDGALAA 231 I ++ G DL+ REVC +PL+ +G +E + + G + Sbjct: 162 ITMHPRLGKQGYKGEVDLQGFSAFREVCQLPLVYNGDIHNLEDIQRISTQFPSLAGIMIG 221 Query: 232 SVFHKQIINIGELKA 246 E K Sbjct: 222 RGLLANPALALEYKE 236 Score = 48.9 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 3/77 (3%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVID 74 VK + + LA + ++ + + VD S EV Sbjct: 133 FSVKMRLGWEQPD--ECLALAPILNDLPLRQITMHPRLGKQGYKGEVDLQGFSAFREVCQ 190 Query: 75 IPFCVAGGIKSLEDAAK 91 +P G I +LED + Sbjct: 191 LPLVYNGDIHNLEDIQR 207 >UniRef50_B3DYN8 Indole-3-glycerol phosphate synthase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DYN8_METI4 Length = 282 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 23/216 (10%), Positives = 56/216 (25%), Gaps = 36/216 (16%) Query: 38 RYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGA 97 +Y + GAD + G + + E + +P I Sbjct: 81 KYQQGGADCISVLTENKFFKGS---LEDLKKAREAVTLPILRKDFI-------------- 123 Query: 98 DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQW 157 ++ + + + + + + + + + Sbjct: 124 -------------IHELQVIESLLGGADALLLIVAILPVRDFFKLYAFCKELGIEALVEV 170 Query: 158 ETLDWVQEVQKRGAGEIVLNMMNQD--GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEH 215 + + GA I +N + V L + E +++ G + + Sbjct: 171 HNEAEIDRALEAGASLIGINNRDLYTLQVDLRVSRGLLPFIPEETI--VVSESGISSSDD 228 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 + R D L F + N + A L ++ Sbjct: 229 LCD-LRVRGADAVLVGE-FLMKQDNPQKAIADLLSR 262 >UniRef50_O19904 Uncharacterized protein ycf23 n=1 Tax=Cyanidium caldarium RepID=YCF23_CYACA Length = 249 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 24/223 (10%), Positives = 59/223 (26%), Gaps = 14/223 (6%) Query: 10 LDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 LD+ + + +K + + ++ +A+ + D V V Sbjct: 9 LDIANKKAIKVISGLTNLNYEHVLTIARASQRACVSYIDIA----------ADPQLVKVV 58 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 ++IP CV+G ++ + GAD I + + + + Sbjct: 59 KANVNIPICVSG--LEIQPIYNAVLAGADLIEVGNYESLYKRNTVLSVCKIITLVEEIKK 116 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 T D+ + + + + + + Sbjct: 117 LCPRVPLTVTIPYILNQKDQINLCKQLESLRVDYIQTEGNSISKCKNHCVQDLLRLSLQT 176 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS 232 L ++ + +P+I S G + + G Sbjct: 177 LACTYELVKHTQLPIICSSGLSDVT--VPLAFSLGASGIGIGK 217 >UniRef50_D1BSN0 Lactate 2-monooxygenase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BSN0_XYLCX Length = 434 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 51/226 (22%), Gaps = 23/226 (10%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 + +R GAD LV T R D +PF GI Sbjct: 168 KDDDVAASFVQRAEAAGADALVVTLDTHVLGWRPRDLDLAY-------LPFARGEGIAQY 220 Query: 87 -----EDAAKILSFGADKISINSPALADPTLI-------TRLADRFGVQCIVVGIDTWYD 134 G +++ A PTL R Sbjct: 221 TSDPAFRRLAAARAGGPASTVDDVAPQRPTLAAVRALLTMRRHGATRTDVETFLDVFSRT 280 Query: 135 AETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-NQDGVRNGYDLEQL 193 T + V + D + GA IV++ + L+ L Sbjct: 281 TLTWADLRHLRETTTLPIVVKGVQHPDDARRALDHGADGIVVSNHGGRQIDNAVASLDAL 340 Query: 194 KKVREVCHV--PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ 237 V P++ G T A D L + Sbjct: 341 PAVAAAVDGRAPVLFDSGIRTGADVFVAL-ALGADAVLLGRPWVYG 385 >UniRef50_A6BK55 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK55_9FIRM Length = 288 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 58/178 (32%), Gaps = 10/178 (5%) Query: 79 VAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 G + ++E K+ +G D++++N + + F I W+ E Sbjct: 44 AKGFLDTVE---KLKGYGYDEVNLNLGCPSKTVVSKGRGSGF---LIHTEELNWFLDEIY 97 Query: 139 KYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVR 197 + + + E + ++ + E++++ Q G DL+ Sbjct: 98 AKADVKISIKTRIGKFDADEWGELLRIYNQYPLEELIVHPRVQQQFYKGHPDLDAFADAV 157 Query: 198 EVCHVPLIASGGAGTMEHFLEAFRD-ADVDGALAASVFHKQIINIGELKAYLATQGVE 254 + C L +G T E + + + + + I E+ + ++ Sbjct: 158 KECKHTLCYNGDIFTTEDMEKLKKRFPEASCIMLGRGILRNPELI-EIMES-GEKKID 213 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 42/158 (26%), Gaps = 7/158 (4%) Query: 5 RIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDK 63 I DV+ +K + + L + Y + +EL+ + + D Sbjct: 95 EIYAKADVK--ISIKTRIGKF--DADEWGELLRIYNQYPLEELIVHPRVQQQFYKGHPDL 150 Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADRFG 121 + + C G I + ED K+ A I + L +P LI + Sbjct: 151 DAFADAVKECKHTLCYNGDIFTTEDMEKLKKRFPEASCIMLGRGILRNPELIEIMESGEK 210 Query: 122 VQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET 159 V+ + W Sbjct: 211 KIDAKKLRAFHDQIYQDYQEVSCGDKNVLFKMKELWCY 248 >UniRef50_C3WVD6 NADH oxidase n=2 Tax=Fusobacterium RepID=C3WVD6_9FUSO Length = 316 Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 12/125 (9%) Query: 2 LAKRIIPCL--DVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVF---YDITASS 56 L K II + +D ++ I D + AK + G D L Sbjct: 190 LVKEIIEAIKSFSKDDFIISYRMGWTENINTD-IETAKALEKLGVDILHVSSGIPEDRKL 248 Query: 57 DGRVVDK--SWVS---RVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADP 110 + +V +V + ++IP V IK+L K++ G D ++ P L+DP Sbjct: 249 KLPDEFEYNDFVYTGIQVKKNVNIPVIVVNDIKTLSRGNKLIEDGDCDFVAYGRPFLSDP 308 Query: 111 TLITR 115 I Sbjct: 309 NFIIH 313 Score = 47.0 bits (110), Expect = 7e-04, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 59/196 (30%), Gaps = 20/196 (10%) Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 ++R+++ D+ + IKS A G D I ++ +++ Sbjct: 125 INRLSKE-DLIYLRDCFIKS---AKFCQEAGLDGIELHGAHTYFFNMLSSEISNKREDNY 180 Query: 126 V-------VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN- 177 + +A + ++ + ++K G + ++ Sbjct: 181 GGNLIERLNLVKEIIEAIKSFSKDDFIISYRMGWTENINTDIETAKALEKLGVDILHVSS 240 Query: 178 MMNQDGVRNGYDLEQLK-------KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALA 230 + +D D + +V++ ++P+I T+ + D D D Sbjct: 241 GIPEDRKLKLPDEFEYNDFVYTGIQVKKNVNIPVIVVNDIKTLSRGNKLIEDGDCDFVAY 300 Query: 231 ASVFHKQI-INIGELK 245 F I +K Sbjct: 301 GRPFLSDPNFIIHSIK 316 >UniRef50_Q98NG5 Oxidoreductase n=4 Tax=Proteobacteria RepID=Q98NG5_RHILO Length = 367 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 45/156 (28%), Gaps = 16/156 (10%) Query: 3 AKRIIPCLDVRDGQVV-KGVQF---------RNHEIIGDIVPLAKRYAEEGADELVF--- 49 R++ + + V K + + D + +AK EG L Sbjct: 209 RMRLVVEIARAVKKAVPKLMLGARLSVKDWVDGGFDVEDAIEVAKALKAEGIAYLCCSSG 268 Query: 50 --YDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPA 106 + G V + IP G I + A +++ G AD +++ Sbjct: 269 GNSPLQKLPTGPGYQVHLAEAVRKGAGIPTRAVGLIDDPQQAEAVIAEGRADMVALARAF 328 Query: 107 LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 LADP R A F + + Sbjct: 329 LADPRWGWRAAATFKEKIHPAPQLARSVTTMEHWMK 364 Score = 41.6 bits (96), Expect = 0.026, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 18/69 (26%) Query: 183 GVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 GY + + VR+ +P A G + + D A F Sbjct: 277 PTGPGYQVHLAEAVRKGAGIPTRAVGLIDDPQQAEAVIAEGRADMVALARAFLADPRWGW 336 Query: 243 ELKAYLATQ 251 A + Sbjct: 337 RAAATFKEK 345 >UniRef50_C7GEK5 NADH:flavin oxidoreductase, Old Yellow Enzyme family n=12 Tax=Bacteria RepID=C7GEK5_9FIRM Length = 644 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 18/149 (12%) Query: 4 KRIIP--CLDVRDGQVVKG----VQFRNHEIIGDIVPLAKRYAEEGADELVFY------- 50 K I+P +D + V + + + AK G D L Sbjct: 203 KTIVPDMVIDYKLPIVTPLGENSFRGKGGLPFDEACIFAKELEACGVDTLHVAQANHTGN 262 Query: 51 --DITASSDGRVV--DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSP 105 D + + S+ ++ E++ IP V G I + E A +++ G AD I + Sbjct: 263 MGDTIPAMGTQPYGFMVSYSKKIKELVSIPVSVVGRIVTPEAAEAVIANGSADIIGLGRS 322 Query: 106 ALADPTLITRLADRFGVQCIVVGIDTWYD 134 L DP + AD + Sbjct: 323 LLTDPDFANKCADGHCCNVRTCMMCNKGC 351 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 24/234 (10%), Positives = 56/234 (23%), Gaps = 32/234 (13%) Query: 20 GVQFRNHEIIGDIVPLAKRYA-------EEGADELVFYDITASSDGRVVDKSWVSRVAEV 72 F N ++ + K E G D + + Sbjct: 127 MQHFVNEVTAEELDEIIKHMENCAILAHEAGVDCIEVHGDR------------------- 167 Query: 73 IDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 + G + S + +G D + AL + + + + + Sbjct: 168 ------LVGSLCSPILNHRTDEYGGDLANRTRFALTLVKRLKTIVPDMVIDYKLPIVTPL 221 Query: 133 YDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ 192 + + + + +D + Q G + + G+ + Sbjct: 222 GENSFRGKGGLPFDEACIFAKELEACGVDTLHVAQANHTGNMGDTIPAMGTQPYGFMVSY 281 Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 KK++E+ +P+ G T E + D + Sbjct: 282 SKKIKELVSIPVSVVGRIVTPEAAEAVIANGSADIIGLGRSLLTDPDFANKCAD 335 >UniRef50_Q9HJH3 Geranylgeranylglyceryl phosphate synthase n=4 Tax=Thermoplasmatales RepID=GGGPS_THEAC Length = 253 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 58/204 (28%), Gaps = 14/204 (6%) Query: 19 KGVQFRNHEIIGDI--------VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVA 70 K + H + D +A+ G D ++ T +S + Sbjct: 11 KTRNGKVHMTLIDPGAKPPQECARIAEEAEMAGTDFIMVGGSTDID--SRAMDEAISAIK 68 Query: 71 EVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGID 130 D+ + G S + +NS +L A + I Sbjct: 69 AKTDLKVIIFPG--SSLMISPKADAIFFMSLLNSGSLEYVVGHQVKAAIPLSAMKIEKIP 126 Query: 131 TWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL 190 Y V + R + L + Q G + + G ++ Sbjct: 127 MAYLVFDPGMTVGRVGKAHLIPRDDEKTALSYALAAQYFGFRLVYFEAGSGSPYHVGENV 186 Query: 191 EQLKKVREVCHVPLIASGGAGTME 214 +++V++ +P+I GG T E Sbjct: 187 --VRRVKQELDIPVIVGGGIRTPE 208 Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 2 LAKRIIP-CLDVRDGQVVKGVQFRNHEIIGD----IVPLAKRYAEEGADELVFYDITASS 56 + IP V D + G + H I D + A G + F + S Sbjct: 120 MKIEKIPMAYLVFDPGMTVGRVGKAHLIPRDDEKTALSYALAAQYFGFRLVYFEAGSGSP 179 Query: 57 DGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 + V RV + +DIP V GGI++ E A + GAD I + Sbjct: 180 YHVGEN--VVRRVKQELDIPVIVGGGIRTPEAAKALAQAGADMIVTGT 225 >UniRef50_A3DN81 Geranylgeranylglyceryl phosphate synthase n=1 Tax=Staphylothermus marinus F1 RepID=GGGPS_STAMF Length = 245 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 30/246 (12%), Positives = 68/246 (27%), Gaps = 18/246 (7%) Query: 12 VRDGQVVKGVQFRNHE--IIGDIVPLAKRYAEEGADELVF---YDITASSDGRVVDKSWV 66 + +G+ + +G + A + AE G D + +T G Sbjct: 12 INNGEKLHFTLIDPDRVNDLGKLEETAIKMAEFGTDAFLIGGSLGVTPEEAGETA----- 66 Query: 67 SRVAEVIDIPFCVA-GGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCI 125 ++ + +P + G I L I +NS A + Sbjct: 67 -KILKKTGLPVIIFPGNINCLT---PYADAVLFMILMNSMEQYYLMHAQIAAAPIIKKYK 122 Query: 126 VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR 185 + + T Y G+ V L + + G I L + Sbjct: 123 LETLPTGYIVIYGETAVAHVGRTYPIPVSKPEILLSYTWAAEMIGIKYIYLEAGSGSPKP 182 Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 + V++ ++ I GG + + + D + ++ + ++ Sbjct: 183 VPPSFPAI--VKKYTNLITIVGGGIRSPF-IAKELASSGADIIVTGTIVEEDPDKASKII 239 Query: 246 AYLATQ 251 + + Sbjct: 240 SAIKKN 245 >UniRef50_B1LZS6 Histidine biosynthesis protein n=10 Tax=Alphaproteobacteria RepID=B1LZS6_METRJ Length = 243 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 77/244 (31%), Gaps = 39/244 (15%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEII---------GDIVPLAKRYAEE-GADELVFYDITAS 55 +IP LD+R G+VV+ + +A+ + A L D+ A Sbjct: 16 VIPVLDLRGGRVVRARRGERSSYAPIETPLAKGSAPDAVARGLRDAWPAAILYVADLDAI 75 Query: 56 SDGRVVDKSWVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 D D + +A + V G L+ G + I S + AD L+T Sbjct: 76 IDRAAPDLRALEAIARACPGVSLWVDAGFAEPAAVDAFLASGLGRPVIGSESQADADLVT 135 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 RL DR G + A E+ Sbjct: 136 RLGDRAVFSLDTRGAERLGPAALHDDPALWP--------------------------PEV 169 Query: 175 VLNMMNQDGVRNGYDLEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + + Q G G DL L +R L A+GG + A R A + GAL AS Sbjct: 170 IAMTLAQVGAGAGPDLGALGALRARAPDRRLYAAGGVRGPDDL-RALRAAGIAGALVASA 228 Query: 234 FHKQ 237 H Sbjct: 229 LHDG 232 >UniRef50_B5WIG7 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Burkholderia sp. H160 RepID=B5WIG7_9BURK Length = 678 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 11/120 (9%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVF---YDITASS-------DGRVVDKSWVSRVAEVID 74 + + D+ +A G D L + T+ + RV Sbjct: 240 DGIALEDMERIAPHLVAAGVDALHVSLGHGSTSFDKIVEPMSMPEGWRLPYARRVRAAAG 299 Query: 75 IPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 +P G I+ E A + G AD +++ P LADP ++ Q + Sbjct: 300 VPVIAVGQIRWPETAEVAIRDGDADLVALGRPLLADPEWASKAKRGATDQIRPCTSCNYC 359 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 10/100 (10%) Query: 157 WETLDWVQEVQKRGAGEIVL---NM-------MNQDGVRNGYDLEQLKKVREVCHVPLIA 206 + + G + + + + + G+ L ++VR VP+IA Sbjct: 245 EDMERIAPHLVAAGVDALHVSLGHGSTSFDKIVEPMSMPEGWRLPYARRVRAAAGVPVIA 304 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 G E A RD D D + K Sbjct: 305 VGQIRWPETAEVAIRDGDADLVALGRPLLADPEWASKAKR 344 >UniRef50_A5DSY8 Anthranilate synthase component II n=1 Tax=Lodderomyces elongisporus RepID=A5DSY8_LODEL Length = 567 Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 58/210 (27%), Gaps = 21/210 (10%) Query: 36 AKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFC---------VAGGIKSL 86 A YA G + G + D S + ++ + I S Sbjct: 353 ALTYAINGCSTISVLTEPNWFKGSLEDLSLIRQIIDGPKTKTIENYKRPAVLRKEFIFSK 412 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 + GAD + + L + L+ L ++ ++ E + Y Sbjct: 413 YQILEARLAGADTVLLIVKMLNNQELLQELYSYSLELDMIPLVEVNDGPELEQALKLTYK 472 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIA 206 G + + + G +++ G V ++A Sbjct: 473 GSTNEPLIIGVNNRNLTNFDVDLGTTSLLVEHAKGSQNGRG------------GDVLILA 520 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHK 236 G +++ + + +VDG L + Sbjct: 521 LSGITSVDDVKKYKYEDNVDGFLIGESLMR 550 >UniRef50_D1B5N0 Dihydroorotate dehydrogenase family protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5N0_THEAS Length = 316 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 31/71 (43%), Gaps = 6/71 (8%) Query: 193 LKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQ----IINIGELKAYL 248 L ++ VPL+A GG + + L+A A + + + ++++L Sbjct: 239 LFQLYPKVSVPLVACGGICSPQDALKAMM-AGASAVQVGTQLFRDLGCCGEILEGIRSFL 297 Query: 249 ATQGVEI-RIC 258 ++G+ + R+ Sbjct: 298 DSRGLSVSRLV 308 >UniRef50_A6P2M8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2M8_9BACE Length = 311 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 36/165 (21%), Gaps = 3/165 (1%) Query: 84 KSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 + ED A + L P+ + Sbjct: 61 RQPEDFLWAAGELAAMGYREVNLNLGCPSGTVTAKGKGSGLLARREELEQLLDGIFAAAP 120 Query: 143 NQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY-DLEQLKKVREVCH 201 + E ++ + E+ ++ + E + Sbjct: 121 MAISIKTRLGMHDPEEFGHLLELYNRYPVAELTVHPRIRGDFYKKPVRPEYFDLAVRMSR 180 Query: 202 VPLIASGGAGTMEHFLEA-FRDADVDGALAASVFHKQIINIGELK 245 PL +G T + +A R V+ + G LK Sbjct: 181 APLCYNGDIITPGDWEKASQRWPGVETVMIGRGLVADPSLAGRLK 225 Score = 43.2 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 28/98 (28%), Gaps = 5/98 (5%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAEVID 74 +K + L + Y EL + + V + + Sbjct: 123 ISIKTRLG--MHDPEEFGHLLELYNRYPVAELTVHPRIRGDFYKKPVRPEYFDLAVRMSR 180 Query: 75 IPFCVAGGIKSLEDAAK--ILSFGADKISINSPALADP 110 P C G I + D K G + + I +ADP Sbjct: 181 APLCYNGDIITPGDWEKASQRWPGVETVMIGRGLVADP 218 >UniRef50_A4E892 Putative uncharacterized protein n=4 Tax=Collinsella RepID=A4E892_9ACTN Length = 317 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 20/82 (24%), Gaps = 2/82 (2%) Query: 166 VQKRGAGEIVLNMMNQDGVRNG-YDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA- 223 + E++++ Q G E + E P+ +G +E Sbjct: 152 YCRMPLAELIVHPRVQKDRYTGLPRKEFYGETLERAPFPVAYNGDIFDLEDMDALVEAYP 211 Query: 224 DVDGALAASVFHKQIINIGELK 245 + +K Sbjct: 212 GTRHVMLGRGLLANPALARMVK 233 >UniRef50_Q5GMK6 Tryptophan synthase alpha chain n=2 Tax=Bacteria RepID=Q5GMK6_9BACT Length = 266 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 56/216 (25%), Gaps = 8/216 (3%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDI---TASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 + + + GAD + I +DG V ++ + + + + G Sbjct: 26 GDPTLERTAEIVLALEQAGADVVEL-GIPFSDPLADGAVNQEAALRALRHGASLRDVL-G 83 Query: 82 GIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 +K+L + + + D V Sbjct: 84 MVKTLRQRSHVPIVLFTYFNPVHSYGLDRFGPDCRDAGVDGVLCVDLPPEEAGEYKASLD 143 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVC 200 + + ++ V + + + R G D + K+++ Sbjct: 144 ALDIATIFLLAPTSTDKRIETVSRHCTGFVYYVSRTGVTGEQARVGEDVRAMVAKIKQHT 203 Query: 201 HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 P+ G EH E R DG + S + Sbjct: 204 DKPVAVGFGISKPEHAAEIARY--ADGVIVGSAIVR 237 >UniRef50_C4KIS5 Geranylgeranylglyceryl phosphate synthase n=13 Tax=Sulfolobaceae RepID=GGGPS_SULIK Length = 255 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 11/125 (8%) Query: 1 MLAKRIIP---CLDVRDGQVVKGVQFRNHEIIGDIVPLA----KRYAEEGADELVFYDIT 53 ML +IP + G + I D LA G D + + Sbjct: 130 MLQIEVIPTAYVIVGHGGTAAHI--GKARVIPYDNFELATAYTLAAEYLGMDFVYLEAGS 187 Query: 54 ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI 113 + + +S + + IP + GGI+S+E A K++ GA+ I + D Sbjct: 188 GA--PEPIRPEMISFIKKASSIPLIIGGGIRSVEVALKLVEAGANIIVTGNIIERDVDKA 245 Query: 114 TRLAD 118 ++ Sbjct: 246 IKIIR 250 Score = 44.7 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 25/217 (11%), Positives = 64/217 (29%), Gaps = 8/217 (3%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 +AK G D + S + +V + + +IP + ++ ++ Sbjct: 47 IAKNLYNVGTDAFLIGGTLGVSKDK---LDFVISLLDDYEIPKII--FPSNINLLSEKAD 101 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 +NS + +A + I T Y Sbjct: 102 ALLFLSLLNSDDIYYVIGAQIVAAPIIKMLQIEVIPTAYVIVGHGGTAAHIGKARVIPYD 161 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTME 214 + + G + L + E + +++ +PLI GG ++E Sbjct: 162 NFELATAYTLAAEYLGMDFVYLEAGSGAPEPIRP--EMISFIKKASSIPLIIGGGIRSVE 219 Query: 215 HFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 L+ +A + + ++ + + ++ + + Sbjct: 220 VALK-LVEAGANIIVTGNIIERDVDKAIKIIRGIKNK 255 >UniRef50_C3IVV3 2-nitropropane dioxygenase NPD n=4 Tax=Bacillales RepID=C3IVV3_BACTU Length = 360 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 21/190 (11%) Query: 65 WVSRVAEVIDIPFCVA-------GGIKSLEDAAKILSFGADKISINSPALADPTLITRLA 117 + + + D PF V + +E ++L+ P +A+ + Sbjct: 55 AIREIRSITDKPFAVNLFCTELKDNLDRVEQVQEVLNK-MRNNLGLKPGIANISTKNLFK 113 Query: 118 DRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLN 177 ++F V + Q D +T T+ Q V++ G IV Sbjct: 114 EQFQVLIEERVPVISTAFGSLPTEQLQIAKDLGIKVITMVTTVREAQLVEEHGVDVIVAQ 173 Query: 178 MMNQDGVRNGYDLEQ------------LKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 G R + +E + +V + +P++A+GG + A Sbjct: 174 GSEAGGHRGTFHVEPDSNGANIGLFSLIPQVVDAVSIPVVAAGGIMDERGLVAAL-ALGA 232 Query: 226 DGALAASVFH 235 G ++F Sbjct: 233 KGIQMGTIFL 242 Score = 43.9 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 31/89 (34%), Gaps = 12/89 (13%) Query: 32 IVPLAKRYAEEGADELVFYDITASS---------DGRVVD---KSWVSRVAEVIDIPFCV 79 V A+ E G D +V A D + S + +V + + IP Sbjct: 155 TVREAQLVEEHGVDVIVAQGSEAGGHRGTFHVEPDSNGANIGLFSLIPQVVDAVSIPVVA 214 Query: 80 AGGIKSLEDAAKILSFGADKISINSPALA 108 AGGI L+ GA I + + L Sbjct: 215 AGGIMDERGLVAALALGAKGIQMGTIFLP 243 >UniRef50_B8FBI2 2-nitropropane dioxygenase NPD n=2 Tax=Desulfobacteraceae RepID=B8FBI2_DESAA Length = 297 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 19/212 (8%), Positives = 53/212 (25%), Gaps = 10/212 (4%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 +++ G + V+ V+E G + LE ++ Sbjct: 1 MSQLLEMLGCQYPILQGPIGELYDPG----MVAAVSEAGAFGVLALGFVSDLEQVKALVG 56 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 + A ++ G+ + + + + Sbjct: 57 KIRELTDKPFGANLMISMNPNNDQIL-EILYDAGVRVVTTSGGSPKKIYPKIKEMGMQGL 115 Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMN----QDGVRNGYDLEQLKKVREVCHVPLIASGGA 210 + + + GA +V++ + + + ++ P++A+GG Sbjct: 116 HVTLSAPMAAKSVEAGADGVVVSGTESGGLRTLGPESTNFILIPLTCDMVKAPVVAAGGI 175 Query: 211 GTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + A G + F + Sbjct: 176 ADKRGYRAAM-ALGAQGVQIGTAFLAAEESPA 206 >UniRef50_C2D6B3 Dihydroorotate oxidase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6B3_9ACTN Length = 309 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 39/118 (33%), Gaps = 21/118 (17%) Query: 31 DIVPLAKRYAEEGADELVFYDI------------------TASSDG---RVVDKSWVSRV 69 +I +A+ EGAD L + T G + V Sbjct: 178 NIPEIARALESEGADALSLINSIPGMAIDTTTYKSKLSRPTGGFSGPAIHPIAVRMVWEA 237 Query: 70 AEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVV 127 + + IP C GGI + +AA+ + GA +S+ L DP R+ Sbjct: 238 HKAVKIPLCGIGGITTGLEAAEFILAGATAVSVGLANLYDPMSAPRILHELCDWAQKQ 295 Score = 42.0 bits (97), Expect = 0.018, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 17/72 (23%), Gaps = 1/72 (1%) Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + + + + + +PL GG T E A Sbjct: 218 TGGFSGPAIHPIAVRMVWEAHKAVKIPLCGIGGITTGLEAAEFI-LAGATAVSVGLANLY 276 Query: 237 QIINIGELKAYL 248 ++ + L Sbjct: 277 DPMSAPRILHEL 288 >UniRef50_A0B8J3 Geranylgeranylglyceryl phosphate synthase n=13 Tax=Euryarchaeota RepID=GGGPS_METTP Length = 255 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 58/223 (26%), Gaps = 8/223 (3%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 + V +A+ A+ G L+ ++ V + + +D+P + S Sbjct: 35 QDPERAVQMARSAADAGTTALMVGGSVGATGS--ALDRTVRAIKDSVDLPVIL--FPSSA 90 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 +NS + + L + + I Y V Sbjct: 91 AGLCDNADAVFFMSLLNSRSTSYLIENQALGAPIVSRYGIEAIPMGYIVVEPGGTVGWVG 150 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVC-HVPLI 205 + R + + G I L + + + VR+ L+ Sbjct: 151 DAKLVPRRKPDIAAAYALAGRYLGMRLIYLEAGSGAE--SPVPTSMVSAVRDAIGDTLLV 208 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 GG E A D + + + +K + Sbjct: 209 VGGGIRDAE-AARKLVSAGADLIVTGTGVEESGDVFRFVKDIV 250 >UniRef50_A4VL89 Morphinone reductase n=2 Tax=cellular organisms RepID=A4VL89_PSEU5 Length = 372 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 14/211 (6%), Positives = 39/211 (18%), Gaps = 21/211 (9%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 G + + ++E A G D + ++ Sbjct: 133 FYGGEGPYATPAEMSEEDIQEAIAGF----ALAARHAREAGFDGVELHGANGYLLHEFMS 188 Query: 116 LADRFGVQCIVVGIDTWYDAE-----------------TGKYHVNQYTGDESRTRVTQWE 158 + + + + + Sbjct: 189 AEFNQRSDQWGGTFLERLRMPLAVIAAVRAAVGEEFVVGMRLSQSMVCDGRLKWEGGEEQ 248 Query: 159 TLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 + + G + + + G R +P+I +G T E Sbjct: 249 ARQRFRILADAGLDYLHITEPDARAPAFGEGPSLAAIARGSVAIPVIGNGAIVTGEQAEA 308 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLA 249 ++D ++ + Sbjct: 309 LLGRGEMDLVAVGKAALANNDWPQRIQQGIE 339 >UniRef50_C5EVU6 NADH:flavin oxidoreductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVU6_9FIRM Length = 625 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 61/210 (29%), Gaps = 14/210 (6%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVV---------DKSWVSRVAEVID 74 + + +A+ GAD + S G + + + + + + Sbjct: 208 EGGRTVQETGEIARILEAAGADAIHVSIGMPESGGYISATMDVEDCFNVENAAVIKKYVS 267 Query: 75 IPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP I ++DA +++ G AD +S+ LADP L+ + Sbjct: 268 IPVIAVNRIVDIKDAVEVVEQGKADMVSMARAQLADPELVNKYLGINDEPVYRCIGCNQG 327 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL 193 + + R + +E Q+ + N + Sbjct: 328 CKDKKARKKITCMQNPLLGREELIHFVPATKEEQQEKILIAGAGPAGLELACNLARRGLV 387 Query: 194 KKVREVCHVPLIASGGAGTMEHFLEAFRDA 223 ++ E +P GG + ++ Sbjct: 388 PEIYEKDQIP----GGLVNLSALAPCKKNM 413 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 31/255 (12%), Positives = 63/255 (24%), Gaps = 33/255 (12%) Query: 25 NHEIIGDIVPLAKRYAEEGADELV-FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 + I D LA G + GR + G I Sbjct: 73 DDSYIPDWKELADMVHSYGTKLFCQLHPA-KHQAGRGHAVE-----RPSDFTKEELDGLI 126 Query: 84 KSLED-AAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHV 142 S A + G D + I+ + L I+ Sbjct: 127 ASYAACALRCKKAGVDGVDIHGAHAHEIALFMSEFYNDRTDGYGGSIEGRALFPAQIIKA 186 Query: 143 NQYTGDESRTR-------------VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---- 185 + T ET + + ++ GA I +++ + Sbjct: 187 IKSACGSGFPVVFRISGTEMVEGGRTVQETGEIARILEAAGADAIHVSIGMPESGGYISA 246 Query: 186 -----NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 + +++E +++ +P+IA ++ +E D A Sbjct: 247 TMDVEDCFNVENAAVIKKYVSIPVIAVNRIVDIKDAVEVVEQGKADMVSMARAQLADPEL 306 Query: 241 IGELKAYLATQGVEI 255 + + YL + Sbjct: 307 VNK---YLGINDEPV 318 >UniRef50_UPI00019056C2 tRNA-dihydrouridine synthase A n=1 Tax=Rhizobium etli GR56 RepID=UPI00019056C2 Length = 182 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 29/97 (29%), Gaps = 12/97 (12%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGY---------DLEQLKKVREVCHVPLIA-SGGAGTMEH 215 V GA I ++ D E + ++++ I +GG T++ Sbjct: 2 VLDAGADAIWIHARKAWLKGLSPKENREIPPLDYEIVYRMKQRWPEVFIGINGGIRTLDE 61 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 VDG + ++ + ++ Sbjct: 62 AASHLAH--VDGVMLGRAAYQNAAVLADVDHRFFGAP 96 Score = 42.0 bits (97), Expect = 0.018, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 42/158 (26%), Gaps = 13/158 (8%) Query: 41 EEGADELVFYDITASSDG---------RVVDKSWVSRVAEVIDIPFCV-AGGIKSLEDAA 90 + GAD + + A G +D V R+ + F GGI++L++AA Sbjct: 4 DAGADAIWIHARKAWLKGLSPKENREIPPLDYEIVYRMKQRWPEVFIGINGGIRTLDEAA 63 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 L D + + A + ++ + RF + Sbjct: 64 SHL-AHVDGVMLGRAAYQNAAVLADVDHRFFGAPAAEPDW--PALCERMMAYAERHIAGG 120 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY 188 + + + + G Sbjct: 121 GRLQHVARHMVGLFTGLPGARRYRQILSTDAAKSGAGP 158 >UniRef50_Q163H4 L-lactate dehydrogenase, putative n=19 Tax=Rhodobacterales RepID=Q163H4_ROSDO Length = 385 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 8/153 (5%) Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQC------IVVGIDTWYDAETGKYHVNQ 144 ++L+ A + + R +++ + + Y Sbjct: 185 RLLAQVATRPAWAWGMAQRGMPRMRGLEKYTPKTENALSSTQHAGYLLRTSPDWDYVAWL 244 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLKKVREVCHVP 203 + V + + ++KRG I ++ ++ L+ +R +P Sbjct: 245 RDAWDGPFVVKGVLRAEDAEPLKKRGVDAIWVSNHAGRQFDAAPASIDALRDIRAATDLP 304 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 LI G L A D + FH Sbjct: 305 LIFDSGIEGGLDILRA-YACGADFVMLGRAFHY 336 >UniRef50_A4E8R9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8R9_9ACTN Length = 539 Score = 54.7 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 35/132 (26%), Gaps = 10/132 (7%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVID 74 + D++ +++R + G D + T G + + + + ++ Sbjct: 121 DGGLTLNDMIYVSRRLEKAGVDMIHVSGGTTIKRGSAIPAAGTQQASHAACSREIKKHVN 180 Query: 75 IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G I A +++ AD + L D + A Sbjct: 181 IPVATVGRINEAWIAEELIEDSAADICMMGRANLCDAEFCNKAAAGNADDIRPCIGCLRC 240 Query: 134 DAETGKYHVNQY 145 Sbjct: 241 LNGIMFGKRISC 252 >UniRef50_B1ATU6 Dihydrouridine synthase 1-like (S. cerevisiae) (Fragment) n=33 Tax=Fungi/Metazoa group RepID=B1ATU6_MOUSE Length = 194 Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 20/69 (28%), Gaps = 6/69 (8%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV---VDKSWVSR 68 + K F I V A+ + G L + T G + + Sbjct: 129 LSVPVTCKIRVF---PEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAGTASWEHIKA 185 Query: 69 VAEVIDIPF 77 V + + IP Sbjct: 186 VRKAVGIPV 194 >UniRef50_B0VIM3 Dihydroorotate dehydrogenase, catalytic subunit (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIM3_9BACT Length = 305 Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 26/130 (20%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD---------ITA------------ 54 +VK + DI +AK E GA + + Sbjct: 165 LIVKL-----SPNVTDIAVIAKAAEEGGATAISLINTIWGMAIDYRNGKSRIKKGIGGYS 219 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 + + + R A+ + IP GGI + +DA + GA I++ + DP + Sbjct: 220 GIGIKPLALALTYRAAQAVKIPVIAMGGIYNWQDALEFFWAGASMIALGTANFIDPLAVD 279 Query: 115 RLADRFGVQC 124 ++ + C Sbjct: 280 KVYEGLSSFC 289 Score = 47.4 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + + +P+IA GG + LE F A + + + ++ L Sbjct: 233 RAAQAVKIPVIAMGGIYNWQDALEFF-WAGASMIALGTANFIDPLAVDKVYEGL 285 >UniRef50_C8WKN8 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WKN8_EGGLE Length = 699 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 26/227 (11%), Positives = 56/227 (24%), Gaps = 16/227 (7%) Query: 30 GDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDA 89 A+R + G D + + S+VSRV D + G +S+E+ Sbjct: 163 DRYFAAAERAKKAGLDGIEVHAANGYF-----LLSFVSRVWNHRDDQY----GCQSVENR 213 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 +++ + + T + I + + + Sbjct: 214 TRLVCEIIRGVKERCGEDFIVGVRTNGQEYGHPDAITIEEGVEIAKFYDAAGADYISVTG 273 Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGG 209 + G + +++ P+ G Sbjct: 274 YGYGPVPMQFALDYWMYPSPDEDMKQFLDR---LDGEGLSIPPAAAIKQAVSAPVFGVG- 329 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 T E A ++D A+ A ++ +IR Sbjct: 330 FATPEKAEAALEKGEIDLAMFARALWADPDMPNKIAE---GAPEDIR 373 Score = 45.9 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 39/150 (26%), Gaps = 30/150 (20%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYD---------------------------ITASSD 57 + I + V +AK Y GAD + + D Sbjct: 247 DAITIEEGVEIAKFYDAAGADYISVTGYGYGPVPMQFALDYWMYPSPDEDMKQFLDR-LD 305 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRL 116 G + + + + + P G + E A L G D ADP + ++ Sbjct: 306 GEGLSIPPAAAIKQAVSAPVFGVGF-ATPEKAEAALEKGEIDLAMFARALWADPDMPNKI 364 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 A+ D ++ Sbjct: 365 AEGAPEDIRRCNHCATCDELRMNETPHRRC 394 >UniRef50_A7NSB8 Dihydroorotate dehydrogenase n=2 Tax=Roseiflexus RepID=A7NSB8_ROSCS Length = 268 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 15/62 (24%), Gaps = 1/62 (1%) Query: 191 EQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 E + +V P++A GG T A S + L Sbjct: 208 EAVAEVCATLPAPVVACGGIVTAADARPFL-AAGAIAVQVGSALLADPWAAVRIAEALEN 266 Query: 251 QG 252 Sbjct: 267 AP 268 Score = 46.6 bits (109), Expect = 8e-04, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVD-----------------KSWVSRVAEVIDI 75 + A+ + GAD + +S V+ V + Sbjct: 160 IATARSVVDVGADAVTIAAPPRASAADPHTGELVHGWLSGPAIRPLVLEAVAEVCATLPA 219 Query: 76 PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 P GGI + DA L+ GA + + S LADP R+A+ Sbjct: 220 PVVACGGIVTAADARPFLAAGAIAVQVGSALLADPWAAVRIAEALENAP 268 >UniRef50_A5GPV9 TRNA-dihydrouridine synthase A n=25 Tax=cellular organisms RepID=A5GPV9_SYNR3 Length = 335 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 24/191 (12%), Positives = 51/191 (26%), Gaps = 14/191 (7%) Query: 72 VIDIPFCVAGG--IKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 I + G E A +G D+I++N + R + V Sbjct: 67 EKPIALQLGGDDPALLAEAAELAERWGYDEINLNVGCPSPKVKKGRFGACLMAEPQQVAR 126 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 + V R + E LD+V V G ++ Sbjct: 127 CVEAMGAACRLPVTVKHRIGIDERDSYDELLDFVDTVAAAGCQRFAVHARKAWLEGLDPK 186 Query: 190 ---------LEQLKKVR-EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + + ++ + + + +GG ++ E VDG + + + Sbjct: 187 QNRTVPPLRYDLVHALKRDRPALIVELNGGLESLSACQEQLHA--VDGVMVGRAAYAHPL 244 Query: 240 NIGELKAYLAT 250 + + Sbjct: 245 QWNRVDQEIFG 255 Score = 43.9 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 38/149 (25%), Gaps = 12/149 (8%) Query: 15 GQVVKGVQFRNHEIIGD-IVPLAKRYAEEGADELVFYDITASSDG---------RVVDKS 64 VK + D ++ A G + A +G + Sbjct: 138 PVTVKHRIGIDERDSYDELLDFVDTVAAAGCQRFAVHARKAWLEGLDPKQNRTVPPLRYD 197 Query: 65 WVSRVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 V + + + GG++SL + L D + + A A P R+ Sbjct: 198 LVHALKRDRPALIVELNGGLESLSACQEQLHA-VDGVMVGRAAYAHPLQWNRVDQEIFGD 256 Query: 124 CIVVGIDTWYDAETGKYHVNQYTGDESRT 152 I + H + R Sbjct: 257 SNATPIKASEVLQGVLPHAEHWCSSGGRL 285 >UniRef50_B0EBU6 tRNA-dihydrouridine synthase, putative n=4 Tax=Entamoeba RepID=B0EBU6_ENTDI Length = 366 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 4/112 (3%) Query: 150 SRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASG 208 R + T ETL+++Q + G I L+ + + D +L+KV + C LI +G Sbjct: 164 IRLQQTHEETLEFIQWLYSLGISIISLHGRHHKELYGVDCDWVELEKVVKDCPYDLILNG 223 Query: 209 GAGTMEHFLEAFRDA-DVDGALAASV--FHKQIINIGELKAYLATQGVEIRI 257 E + +V G + H + N ++R+ Sbjct: 224 DICKQEDITKLLSFGKNVRGVMIGRASGIHLGLFNPQGGDYVFDENKTKMRM 275 Score = 50.9 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 10/188 (5%) Query: 19 KGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVIDIPF 77 K + + + + G + + G D + +V + Sbjct: 163 KIRL---QQTHEETLEFIQWLYSLGISIISLHGRHHKELYGVDCDWVELEKVVKDCPYDL 219 Query: 78 CVAGGIKSLEDAAKILSFG--ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDA 135 + G I ED K+LSFG + I + L + + Sbjct: 220 ILNGDICKQEDITKLLSFGKNVRGVMIGRASGIHLGLFNPQGGDYVFDENKTKMRMTDFV 279 Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKK 195 + ++T + D+ +RG + LN MNQ + + +++ Sbjct: 280 QRAIRDGLRFTKIKFVLLQIIRYEKDYPFGSWRRGKTTLKLNQMNQRISSS----KTIEQ 335 Query: 196 VREVCHVP 203 + ++ +P Sbjct: 336 LIDIISLP 343 >UniRef50_A5IK84 Dihydroorotate dehydrogenase n=10 Tax=Thermotogaceae RepID=PYRD_THEP1 Length = 270 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 28/215 (13%), Positives = 59/215 (27%), Gaps = 17/215 (7%) Query: 47 LVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLED---AAKILSFGADKISIN 103 + ++V + + +P + G S E+ A++ AD+ Sbjct: 55 FYVINRIGLE--NPGIHAFVENIP-ELPVPMIASLGGDSFEEYLEVARVFKKVADRFYAV 111 Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 + P + + E + G E E + Sbjct: 112 EFNFSCPNVKEGGLSIVKNAEEWKKLLNTLRKELPDSFLIAKVGVEGIFVEDAAEFVMKT 171 Query: 164 QEVQKRGAGEI---------VLNMMNQDGVRNGYDLEQLKKVRE-VCHVPLIASGGAGTM 213 + ++ V L + +V++ + +IASGG ++ Sbjct: 172 GWDGITLVNTVRGLHFEKDTMILGGLSGPVLKPIALRAVYEVKKRFPELFVIASGGVYSV 231 Query: 214 EHFLEAFRDADVDGALAASVFHKQIINIGELKAYL 248 + E + D S K + E+ YL Sbjct: 232 KDAEEFLKV-GADVIGVGSALFKDPGVVEEIGKYL 265 Score = 40.1 bits (92), Expect = 0.081, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 19/114 (16%) Query: 23 FRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG---------------RVVDKSWVS 67 + D + G D + + + + V Sbjct: 155 GVEGIFVEDAAEFVM---KTGWDGITLVNTVRGLHFEKDTMILGGLSGPVLKPIALRAVY 211 Query: 68 RVAEVID-IPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 V + + +GG+ S++DA + L GAD I + S DP ++ + Sbjct: 212 EVKKRFPELFVIASGGVYSVKDAEEFLKVGADVIGVGSALFKDPGVVEEIGKYL 265 >UniRef50_UPI0001C3656A NADH:flavin oxidoreductase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C3656A Length = 646 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 37/133 (27%), Gaps = 13/133 (9%) Query: 15 GQVVKGVQFRNHEI---IGDIVPLAKRYAEEGADELVFYDITASSDGRVV---------D 62 V+ I D + AK + G D + V + Sbjct: 220 PLTVRLSGTDYEPDGMTIEDTIYYAKELEKLGIDAFHISGGDHHTMIHQVSPMAMPVCYN 279 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFG 121 V + + +P +G I + A IL G AD I++ P AD + + + Sbjct: 280 VWAAEAVKKEVHVPVMASGSITLPQYAEDILEQGKADFITLGRPMWADNEWVKKAMEDRP 339 Query: 122 VQCIVVGIDTWYD 134 Sbjct: 340 EDIRPCIRCNEGC 352 Score = 50.5 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 64/219 (29%), Gaps = 25/219 (11%) Query: 60 VVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA----------- 108 + + E + I + A + + G D + I++ Sbjct: 128 PMLYDQFHAIPEELTIDEIQVLIEAFGDAAKRAVDAGFDLVEIHAAHGYLITNFLSPFTN 187 Query: 109 --DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEV 166 +RF VV V D +T +T+ + +E+ Sbjct: 188 KRGDWYGGSRENRFRFLGQVVENCRRKVGPDFPLTVRLSGTDYEPDGMTIEDTIYYAKEL 247 Query: 167 QKRGAGEIVLNMMNQDGV---------RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFL 217 +K G ++ + + Y++ + V++ HVP++ASG ++ Sbjct: 248 EKLGIDAFHISGGDHHTMIHQVSPMAMPVCYNVWAAEAVKKEVHVPVMASGSITLPQYAE 307 Query: 218 EAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIR 256 + D +K + + +IR Sbjct: 308 DILEQGKADFITLGRPMWADNEW---VKKAMEDRPEDIR 343 >UniRef50_B4YSU0 BaiCD n=2 Tax=Clostridium hylemonae RepID=B4YSU0_9CLOT Length = 640 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 8/62 (12%), Positives = 24/62 (38%) Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 +G+++E + +++ +P++ G T E + D D + ++ Sbjct: 262 PHGFNIENIYNIKKQIKIPVVGVGRINTGEMANQVIEDGKFDLVAIGRAQLADPEWVTKV 321 Query: 245 KA 246 + Sbjct: 322 RE 323 >UniRef50_C4GCT1 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GCT1_9FIRM Length = 803 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 63/228 (27%), Gaps = 6/228 (2%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIP 76 ++ F +I+ + A E G D + + ++ + ++ R+ P Sbjct: 230 CMRLTDFSLRKIVNNCGQAAADAREIGLDGIYLHGHEGYLLEQLTNPAFNRRLLGRYADP 289 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 I + + G+D + L+ T V + Sbjct: 290 EQFGLEI--VRKIRDRV--GSDYPIMYRIDLSLALNETYREKMDTVPSLRKFKHGRSIQA 345 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV 196 T Y + V +W G +++ + L Sbjct: 346 TLSYMKHLVEAGVDMFDVDIGCYDNWWLPHPPAGMPAGCFLDISRIAREYFAQNKILSNA 405 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 E VP++A G G + +A RD D D + A + Sbjct: 406 GE--KVPVVAVGKLGYPDLAEKALRDGDCDMVMLARPLLSDADWCKKA 451 >UniRef50_Q1PZY3 Similar to NADH oxidase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZY3_9BACT Length = 659 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 36/135 (26%), Gaps = 10/135 (7%) Query: 29 IGDIVPLAKRYAEEGADELVFYDITASSDG---------RVVDKSWVSRVAEVIDIPFCV 79 + + +AK GA + +S + +++IP Sbjct: 252 LEESKEIAKILERAGASAIHVSACNYASAFFNIPCYYLEEGCFIHLAEGIKAIVNIPVLS 311 Query: 80 AGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 G I+ A ++L AD I + +ADP ++ + V Sbjct: 312 VGRIQDPAMAEEVLKENKADLIVLGRSLIADPCWPNKVKEGNLDDIQVCLSCNRCIESIS 371 Query: 139 KYHVNQYTGDESRTR 153 + Sbjct: 372 DKKLICTVNPYIGKD 386 Score = 50.5 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 20/205 (9%), Positives = 53/205 (25%), Gaps = 22/205 (10%) Query: 64 SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQ 123 + + + I A A + L G D + I+ Sbjct: 147 PLTKEMPKELTIDEIKAIINAFACGAERALKAGFDGVEIHMAHGYLVNQFFSAESNTRTD 206 Query: 124 CI-------------VVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 +V + + T + E+ + + +++ G Sbjct: 207 DYGGDTSRRARFGREIVEEIRKKVPADYPVICRISADEYTETGLKLEESKEIAKILERAG 266 Query: 171 AGEIVLNMMNQDGVRNGYDLEQLKK---------VREVCHVPLIASGGAGTMEHFLEAFR 221 A I ++ N L++ ++ + ++P+++ G E + Sbjct: 267 ASAIHVSACNYASAFFNIPCYYLEEGCFIHLAEGIKAIVNIPVLSVGRIQDPAMAEEVLK 326 Query: 222 DADVDGALAASVFHKQIINIGELKA 246 + D + ++K Sbjct: 327 ENKADLIVLGRSLIADPCWPNKVKE 351 >UniRef50_C3RNU9 NADH:flavin oxidoreductase n=2 Tax=Bacteria RepID=C3RNU9_9MOLU Length = 625 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 26/220 (11%), Positives = 53/220 (24%), Gaps = 19/220 (8%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVF-YDITASSDG--------RVVDKSWVSR 68 V V+ G + +AK G + L + V Sbjct: 209 VHKVEGFRQIDEG--IAMAKILEGAGIEALHVDVGCYEAWYKAISTVYNEEGHQLDVVKA 266 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFGA-DKISINSPALADPTLITRLADRFGVQCIVV 127 + E + +P G + + A ++++ G D + + LADP ++ + Sbjct: 267 IKENVSLPVLGQGKLFDPKKAQEVVAQGVLDYVVLGHQMLADPHWANKVKQGNTMDIAPC 326 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQ----WETLDWVQEVQKRGAGEIVLNMMNQDG 183 + + + G + + Sbjct: 327 VGCNECLLAGFSGKHYYCAVNPLCYAEKEFALPKVDGIKKSVLVIGGGPGGMYAAITARK 386 Query: 184 VRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDA 223 D L + E L A+G L+ Sbjct: 387 RGYEVD---LYEKEERLGGTLWAAGMPTFKHDVLKLITYL 423 >UniRef50_A4A9J1 2-nitropropane dioxygenase, NPD n=1 Tax=Congregibacter litoralis KT71 RepID=A4A9J1_9GAMM Length = 345 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 10/88 (11%) Query: 32 IVPLAKRYAEEGADELVFYD----------ITASSDGRVVDKSWVSRVAEVIDIPFCVAG 81 A+ + GAD ++ +T ++ + + + +P AG Sbjct: 154 TADEARWLMDHGADAIIAQGIEAGGHRGMFLTRDLGSQLGTMTLLEAIQRATTLPVIAAG 213 Query: 82 GIKSLEDAAKILSFGADKISINSPALAD 109 G+ + E A + L GA + + L Sbjct: 214 GLSTPEQAREALDAGAWAVQAGTAYLCC 241 Score = 54.0 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 60/214 (28%), Gaps = 29/214 (13%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 V L + A + Y++ R + A Sbjct: 45 AVALIEELEAIRASGITLYNLN-FFCHRPPLRDAQVEAR-------------WRGALAPY 90 Query: 92 ILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESR 151 + D SI A P LA G + +V + + Sbjct: 91 FREYQIDPTSIPEGAGRVPFSSETLALIAGFEPPIVSFHFGLPDRGSIDGIKSW----GG 146 Query: 152 TRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----------DLEQLKKVREVCH 201 + T D + + GA I+ + G R + + L+ ++ Sbjct: 147 QIWSSATTADEARWLMDHGADAIIAQGIEAGGHRGMFLTRDLGSQLGTMTLLEAIQRATT 206 Query: 202 VPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 +P+IA+GG T E EA DA A + + Sbjct: 207 LPVIAAGGLSTPEQAREAL-DAGAWAVQAGTAYL 239 >UniRef50_Q2LPX5 Indole-3-glycerol phosphate synthase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LPX5_SYNAS Length = 245 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 28/229 (12%), Positives = 56/229 (24%), Gaps = 31/229 (13%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWV 66 P + V+ + + D V LA+ A + + G + Sbjct: 29 FPVI---SEVKVRSDKEGDLLRGRDPVALAQEMARCPVAGISVVTESEHFGG---HMGLL 82 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIV 126 S VA +DIP I++ + GA I I + L + + Sbjct: 83 SAVAAAVDIPVLHKDFIRNERQIEESADCGASAILIITALLETKQMERLIEKAMCCGLET 142 Query: 127 VGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN 186 + ++ + +T E+ N +++ Sbjct: 143 LVEAHSLAEIKKVEDLSFDLMGINNRDIT---------------VFELDDNDVSRTEELA 187 Query: 187 GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 G+ + E + A D L + Sbjct: 188 GFCKGSRILISESSISSAV---------EARRA-GKGGADAVLVGTAVL 226 >UniRef50_D1VVG5 Putative enoyl-(Acyl-carrier-protein) reductase II n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVG5_9FIRM Length = 310 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%) Query: 33 VPLAKRYAEEGADELVFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAK 91 + LAKR + GAD ++ A+ G + + +VA+ ++IP AGGI S Sbjct: 118 IALAKRMEKLGADGIIVEGEEAAGHIGDISTMVLLPQVAQAVNIPVVAAGGIGSGRQIFA 177 Query: 92 ILSFGADKISINSPALADPTLITR 115 GA I + LA Sbjct: 178 AEVLGASGIQFGTSLLATFECPIH 201 Score = 50.1 bits (118), Expect = 7e-05, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 2/72 (2%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQL-KKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 ++K GA I++ G L +V + ++P++A+GG G+ A Sbjct: 124 MEKLGADGIIVEGEEAAGHIGDISTMVLLPQVAQAVNIPVVAAGGIGSGRQIFAA-EVLG 182 Query: 225 VDGALAASVFHK 236 G + Sbjct: 183 ASGIQFGTSLLA 194 >UniRef50_Q2SS69 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=5 Tax=Mycoplasma RepID=NANE_MYCCT Length = 226 Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 71/230 (30%), Gaps = 28/230 (12%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAE 71 +++ +V Q E + D L+K + R+ + V + Sbjct: 7 IKNTLIVSC-QAIGDEPLNDSYVLSKMAYAL------VLGGSKVL--RLSQVEHIKAVKQ 57 Query: 72 VIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 V+D+P ++ D S + + + + + + T Sbjct: 58 VVDVPIIG------------LIKKHYD-NSEVFITPTIKEVDQLVDLKVDIIALDATLRT 104 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-- 189 D + T ++ + +++ Q G I + G++ Sbjct: 105 RPDQDLTNLVKTIKTKYPNQLLLADCSSVEDAINAQNLGFDLIASTLRGSTKQTKGHNNL 164 Query: 190 ---LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + L+ +++V P+IA GG T + E + + + + + Sbjct: 165 ENNYQFLRDLKKVITKPIIAEGGIWTPQQAKEIL-NLGIHSVVVGTAITR 213 >UniRef50_B9Y4T3 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4T3_9FIRM Length = 242 Score = 54.0 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 66/245 (26%), Gaps = 28/245 (11%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEE---GADELVFYDITASSDGRVVDKSWVSR 68 +R G VV F G +AK GA + R + Sbjct: 11 LRGGLVVSCQAFDYEPFYG-AEMMAKMAVSAKLGGAAAI-----------RASWPENIRA 58 Query: 69 VAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVG 128 + + +D+P KI+ DK + + + Sbjct: 59 IKKEVDLPIFG---------INKIMPEVYDKFRDVIITPTLTSARAVAEAGADIVAVDCT 109 Query: 129 IDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-- 186 + E + + +Y + + + T + + GA + + Sbjct: 110 LRQGRTPEMIQTLLQEYKAELDVMIMAEISTAEEGRIAASGGADILSTTIAGYTPYSRQL 169 Query: 187 -GYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELK 245 D ++++ E +P+ A G E ++AF+ S + E Sbjct: 170 DEPDYRLIEELVETTTLPINAEGRFHRPEQVVQAFK-TGAWTVTVGSAITRPHCITQEFI 228 Query: 246 AYLAT 250 + Sbjct: 229 RAIHQ 233 >UniRef50_A8ZZT0 2-nitropropane dioxygenase NPD n=2 Tax=Desulfobacteraceae RepID=A8ZZT0_DESOH Length = 355 Score = 54.0 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 27/96 (28%), Gaps = 2/96 (2%) Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQ-LKKVREVCHVPLI 205 V T +K GA +++ + + + ++P+I Sbjct: 115 HRYGGKVVATVTTAKHALSAEKHGADALIVTGHEAAAHGGAVASMVLIPGIVDRVNIPVI 174 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINI 241 A+GG A +G + F + Sbjct: 175 AAGGIADGRGLAAALV-LGAEGVAMGTRFMNTRESP 209 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 2/100 (2%) Query: 17 VVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV-VDKSWVSRVAEVIDI 75 VV + + A + GAD L+ A++ G + + + ++I Sbjct: 113 VVHRYGGKVVATVT-TAKHALSAEKHGADALIVTGHEAAAHGGAVASMVLIPGIVDRVNI 171 Query: 76 PFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 P AGGI A L GA+ +++ + + Sbjct: 172 PVIAAGGIADGRGLAAALVLGAEGVAMGTRFMNTRESPVH 211 >UniRef50_A3JUQ7 FMN-dependent alpha-hydroxy acid dehydrogenase family protein n=4 Tax=Rhodobacterales RepID=A3JUQ7_9RHOB Length = 381 Score = 54.0 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 37/122 (30%), Gaps = 11/122 (9%) Query: 136 ETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD-LEQLK 194 +Y + + + V + + G I ++ + G +EQL Sbjct: 235 PDWQYLRDLRQEWDGKLIVKGVLRPTDAKRIASEGVDCIWVSNHSGRQFEAGPAVIEQLP 294 Query: 195 KVREVC--HVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 K+RE +PLI G + A D + F A +G Sbjct: 295 KIREAVGSDLPLIYDSGVVWGLDVMRALAK-GADYVMVGRAFQY-------AVAAFGARG 346 Query: 253 VE 254 ++ Sbjct: 347 ID 348 Score = 39.7 bits (91), Expect = 0.086, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 6/95 (6%) Query: 20 GVQFRNHEIIGDIV---PLAKRYAEEGADELVFYDIT-ASSDGRVVDKSWVSRVAEVI-- 73 Q + ++I V AKR A EG D + + + + + ++ E + Sbjct: 243 LRQEWDGKLIVKGVLRPTDAKRIASEGVDCIWVSNHSGRQFEAGPAVIEQLPKIREAVGS 302 Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 D+P G+ D + L+ GAD + + Sbjct: 303 DLPLIYDSGVVWGLDVMRALAKGADYVMVGRAFQY 337 >UniRef50_A4YQH6 NADPH dehydrogenase n=5 Tax=Bacteria RepID=A4YQH6_BRASO Length = 786 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 6/113 (5%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDI-----TASSDGRVVDKSWVSRVAEVIDIPFC 78 D V +A+ + E G D + GR+ + +V + Sbjct: 630 EGGITGDDAVRIARAFGEAGVDLVDVSTGQTVREARPIYGRMFQTPFSDQVRNEAHVATM 689 Query: 79 VAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGID 130 G I + + IL+ G AD +++ P L DP + A +G Sbjct: 690 CVGNITTADQVNTILAAGRADLVALGRPHLVDPAFTMKAAAWYGADMFCPPQY 742 >UniRef50_A8TGW8 Histidine biosynthesis protein n=1 Tax=Methanococcus voltae A3 RepID=A8TGW8_METVO Length = 181 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 5/142 (3%) Query: 80 AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 GGIK+ E+A+KI G +KIS+NS P+L+T L+ +G Q IV +D + Sbjct: 12 GGGIKTFEEASKIFELGFEKISLNSVLFEKPSLLTELSQSYGSQSIVASVDVKKNLFGKL 71 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 N + + LD+V+ ++ GAGE+++N ++ +G GY+L + ++ Sbjct: 72 KVYNGSKNNSINDK-----ILDYVKNLENLGAGELLINSVDLEGTYKGYNLSLINELSNA 126 Query: 200 CHVPLIASGGAGTMEHFLEAFR 221 +PLIA GGA + + F +A + Sbjct: 127 LTIPLIALGGASSTKDFKDALQ 148 >UniRef50_A9KRF8 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=Clostridiales RepID=A9KRF8_CLOPH Length = 354 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 34/124 (27%), Gaps = 9/124 (7%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFY--------DITASSDGRVVDKSWVSRVAE 71 + D + A+ + E G D L + ++ E Sbjct: 213 MRLGGFEPTLEDAIAYARIFEESGVDFLDISYGFVQESTPVVPKDYPFKDIIYAAQKIKE 272 Query: 72 VIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGID 130 + IP GI S E A KIL D + I L + + V + Sbjct: 273 AVSIPVFAVNGINSPELADKILEQTKVDMVDIGRGTLVNYNWANDAKEGRDVGTCLYCKT 332 Query: 131 TWYD 134 + Sbjct: 333 CMWR 336 Score = 51.6 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 19/183 (10%), Positives = 56/183 (30%), Gaps = 10/183 (5%) Query: 74 DIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP--TLITRLADRFGVQCIVVGIDT 131 ++ I ++ A G + + +S ++ + R DR+G + + ++ Sbjct: 138 ELHAIQQDFIMAVRRAYLAGYDGVEIHACHSYLISQFLNRRVNRRDDRYGQKPELFALEI 197 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM-----NQDGVRN 186 + T + + + + ++ G + ++ ++ Sbjct: 198 IREIRKQTPSDFIIGMRLGGFEPTLEDAIAYARIFEESGVDFLDISYGFVQESTPVVPKD 257 Query: 187 GYDLEQL---KKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 + + +K++E +P+ A G + E + VD + Sbjct: 258 YPFKDIIYAAQKIKEAVSIPVFAVNGINSPELADKILEQTKVDMVDIGRGTLVNYNWAND 317 Query: 244 LKA 246 K Sbjct: 318 AKE 320 >UniRef50_P95040 Putative L-lactate dehydrogenase [cytochrome] 1 n=47 Tax=Bacteria RepID=LLDD1_MYCTU Length = 396 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 51/208 (24%), Gaps = 11/208 (5%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 +R + GA LV T + D ++ E +++ + S E + Sbjct: 139 AERVERARQAGAVGLVVT--TDWTFSHGRDWGS-PKIPEEMNLKTILR---LSPEAITRP 192 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 ++ P L P R G T + Sbjct: 193 RWLWKFAKTLRPPDLRVPNQGRRGEPGPPFFAAY-GEWMATPPPTWEDIGWLRELWGGPF 251 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDG-VRNGYDLEQLKKVREVCH--VPLIASGG 209 + +D + G I ++ + + L V V ++ GG Sbjct: 252 MLKGVMRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRALPAVSAAVGDQVEVLLDGG 311 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQ 237 ++A + + Sbjct: 312 IRRGSDVVKAV-ALGARAVMIGRAYLWG 338 >UniRef50_C4WAT2 Indole-3-glycerol phosphate synthase n=2 Tax=Staphylococcus RepID=C4WAT2_STAWA Length = 266 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 21/202 (10%), Positives = 45/202 (22%), Gaps = 31/202 (15%) Query: 34 PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKIL 93 K Y GA+ + G + ++++ +P + + Sbjct: 75 QQIKDYETYGANAISILTDERYFGGS---FERLQQLSKQTSLPVLCKDFVINEIQIDVAK 131 Query: 94 SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTR 153 + GA I + L D L + V+ Sbjct: 132 AAGASIILLIVNILTDEQLHRLYHYACQLDLEVLV------------------------- 166 Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTM 213 + +Q + I +N + + I+ G Sbjct: 167 --EVHDSQELQRAYELKPEIIGVNNRDLKRFVTDVAHTNQILAHKKDDFHYISESGIHNQ 224 Query: 214 EHFLEAFRDADVDGALAASVFH 235 + + +DG L Sbjct: 225 SDVEKIV-HSGIDGLLIGETLM 245 >UniRef50_C2BGB2 NADH:flavin oxidoreductase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BGB2_9FIRM Length = 639 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 73/239 (30%), Gaps = 22/239 (9%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFY-DITASSD--------GRVVDKSWVSRVAEVID 74 + + + +A Y + GAD L ++ ++ + + + Sbjct: 227 EGGLKLDEGIKVAIAYEKAGADALDISQGCNSAMAISTPPYFLKTAFNEDNCREIKKHVS 286 Query: 75 IPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 IP G I S E A +++S G AD + + LADP + + + + + T Sbjct: 287 IPVICPGRIISPEIAEEVISSGAADFVDVGRAQLADPDFVKKAEEGRADEITLCVGCTQA 346 Query: 134 DAETGKY----HVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 + R + T V G + + + Sbjct: 347 CFSRIMKGDVSCIFNPQTGHEIDRKIEATTNPKKILVIGGGPAGLEASRVAALRGHKVIL 406 Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAA---SVFHK-QIINIGEL 244 E+ +++ I +G A +A V A A + + NI E+ Sbjct: 407 FEKTRRL----GGQYILAGAAPHKSILADAVSQMGVKAASAGVDIRLATEANPENIKEI 461 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 6/62 (9%), Positives = 21/62 (33%) Query: 185 RNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + ++ + +++++ +P+I G + E E D + + Sbjct: 270 KTAFNEDNCREIKKHVSIPVICPGRIISPEIAEEVISSGAADFVDVGRAQLADPDFVKKA 329 Query: 245 KA 246 + Sbjct: 330 EE 331 >UniRef50_B5RQ77 Histidine phosphokinase/phophatase, putative n=4 Tax=Borrelia RepID=B5RQ77_BORRA Length = 339 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 51/176 (28%), Gaps = 8/176 (4%) Query: 75 IPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 I A +IL + G I +N + + + + Sbjct: 83 IAQIWGDDPDKFVKAIEILSNLGFWGIDLNMGCPKKKIVKKGVCSALINNKSL-AHEIII 141 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY----D 189 ++ ++R E DW+ + K G + ++ G Sbjct: 142 ASKEACLKYGLPLSVKTRHGFFCSEVEDWLGFLLKLGIDMLTVHPRLVINQSEGPIDVNV 201 Query: 190 LEQLKKVREVCH--VPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 ++L K+R + V +I +G ++ + +DG + K + Sbjct: 202 FDELVKLRNKINPYVVIIGNGDVLSLNQAYQMINKYSIDGIMFGRGILKNLNLFRR 257 Score = 40.9 bits (94), Expect = 0.038, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 48/173 (27%), Gaps = 10/173 (5%) Query: 15 GQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITAS-SDGRVVDKSWVSRVAE-- 71 VK + D + + G D L + +D + + + Sbjct: 153 PLSVKTRHGFFCSEVEDWLGF---LLKLGIDMLTVHPRLVINQSEGPIDVNVFDELVKLR 209 Query: 72 ---VIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVV 127 + G + SL A ++++ D I L + L R F + Sbjct: 210 NKINPYVVIIGNGDVLSLNQAYQMINKYSIDGIMFGRGILKNLNLFRRDEPNFLDSDLNF 269 Query: 128 GIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 ++ T + T D ++ + + + + + N + Sbjct: 270 RLNILKLHITDFHSTWGITKDFNKLKKYFKIYFNENEICSEYFYNIMSSNNYD 322 >UniRef50_C1E9S0 Predicted protein n=2 Tax=cellular organisms RepID=C1E9S0_9CHLO Length = 499 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 20/214 (9%), Positives = 51/214 (23%), Gaps = 18/214 (8%) Query: 50 YDITASSDG-RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 + +T G + + V + + + ++++ + + Sbjct: 87 HPLTVQLGGASPERLALAATVCDAEYRYDEINLNCGCPSN--RVVNKKDVATCFGAALMR 144 Query: 109 DPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQK 168 DPT + R V + D + ++ Q Sbjct: 145 DPTHVGECLRRMREAVDVPVTVKHRLGVRPTEKSPDDSMDSYAFVSEFVDVVN-----QA 199 Query: 169 RGAGEIVLNMMNQDGVRNGY----------DLEQLKKVREVCHVPLIASGGAGTMEHFLE 218 G +++ E + + +GG TM+ E Sbjct: 200 SGVKHFIVHARAAVLSGLSTTGNRTVPPLRHAEVHALADDFPSLGFTLNGGIETMDQAAE 259 Query: 219 AFRDADVDGALAASVFHKQIINIGELKAYLATQG 252 + G + ++ + E+ A Sbjct: 260 HLESGKLRGVMLGRAVYRNPAVLAEVDARFYGDE 293 >UniRef50_A0N0V5 Putative NADH-dependent flavin oxidoreductase n=2 Tax=Proteobacteria RepID=A0N0V5_9RHOO Length = 371 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 6/112 (5%) Query: 28 IIGDIVPLAKRYAEEGADELVFY--DITASSD---GRVVDKSWVSRVAEVIDIPFCVAGG 82 + + V A+ + G D + + + R+ DI V G Sbjct: 243 TVDETVAFARELRKLGCDYIDVSSGGLHPAQAVPLAPAYHAEIAQRIRNEADIKVMVVGL 302 Query: 83 IKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 I A KI+ G AD + + A+ DP A+ FG + T Sbjct: 303 IADPHVATKIVESGQADFVCMGRGAMWDPRFPWHAAETFGAEAQYPARSTPC 354 >UniRef50_B0GA01 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0GA01_9FIRM Length = 338 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 13/163 (7%) Query: 11 DVRDGQVVKGVQFRNHEIIGDIVPLAK---RYAEEGADELVFYDIT-ASSDGRVVDKSWV 66 DV+ +K ++ D A+ Y + +EL+ + + Sbjct: 127 DVK--ISIKTRIGKD-----DPEEFARLLDIYNQYPVEELIIHPRVQKDFYKNQPNLGAF 179 Query: 67 SRVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQC 124 E IP C G I + E ++ D + L +P L+ + R Sbjct: 180 HDAVEESKIPLCYNGDIFTPESYEEMKREFPQVDTFMLGRGILMNPALLDLIRMREKTDV 239 Query: 125 IVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQ 167 + + + + D + + + ++ Sbjct: 240 KKTTDIDVTEWKKEETSRKMQSADRYKKEIHAFLEQIKCDYLE 282 Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 2/93 (2%) Query: 155 TQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKVREVCHVPLIASGGAGTM 213 E + + E++++ Q +L E +PL +G T Sbjct: 140 DPEEFARLLDIYNQYPVEELIIHPRVQKDFYKNQPNLGAFHDAVEESKIPLCYNGDIFTP 199 Query: 214 EHFLEAFRD-ADVDGALAASVFHKQIINIGELK 245 E + E R+ VD + + ++ Sbjct: 200 ESYEEMKREFPQVDTFMLGRGILMNPALLDLIR 232 >UniRef50_O29991 NADH-dependent flavin oxidoreductase n=1 Tax=Archaeoglobus fulgidus RepID=O29991_ARCFU Length = 378 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 21/224 (9%), Positives = 52/224 (23%), Gaps = 32/224 (14%) Query: 20 GVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCV 79 + +I V A R + G D + + ++ ++ Sbjct: 154 MTREDIERVIEAFVKAALRAEKAGFDAVQLHAAHGYL--------LSEFISPHVN----- 200 Query: 80 AGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGK 139 + +G ++ I +R+ + E + Sbjct: 201 ----------RRKDEYGQERAKILLDIFDGIRQRSRIPVMIKMNACDFVPGGLEIDEAVR 250 Query: 140 YHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREV 199 V+ + Y E +++E Sbjct: 251 IAKLLDDAGFEAIEVSGGMYESIYHN-------RYNVVSQKVAKSGEAYFREYAFRIKEA 303 Query: 200 CHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGE 243 +P++A GG + + E + VD + + + Sbjct: 304 VSIPVMAVGGIKSRQTAEELLKK--VDFVSMSRPLIRDPYLPKK 345 >UniRef50_C3Z7Q2 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3Z7Q2_BRAFL Length = 358 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 6/45 (13%), Positives = 15/45 (33%) Query: 198 EVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + +P+ A+G ++ ++ DG + A Sbjct: 1 DSVKIPVFANGNILNLQSVERCMKETGTDGIMTAEGNLHNPALFE 45 >UniRef50_B6KJZ7 Inosine-5'-monophosphate dehydrogenase n=4 Tax=Alveolata RepID=B6KJZ7_TOXGO Length = 551 Score = 54.0 bits (128), Expect = 5e-06, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 3/73 (4%) Query: 33 VPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKI 92 + AK E GAD LV +S + V R+ + G + + A + Sbjct: 241 IERAKALQEAGADVLVV---DSSQGDSIYQVDLVKRLKAAFPELQIIGGNVVTARQAKSL 297 Query: 93 LSFGADKISINSP 105 + G D + I Sbjct: 298 IDAGVDGLRIGMG 310 Score = 49.7 bits (117), Expect = 9e-05, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 4/67 (5%) Query: 190 LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 K RE +P IA GG H ++A + + S+ GE Y Sbjct: 332 YHVCKYAREHGDLPCIADGGIQNSGHVMKAL-ALGANAVMMGSMLAGTEEAPGE---YYF 387 Query: 250 TQGVEIR 256 GV ++ Sbjct: 388 HNGVRVK 394 Score = 47.0 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 37/117 (31%), Gaps = 27/117 (23%) Query: 2 LAKRI---IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG 58 L KR+ P L + G VV Q AK + G D L + S Sbjct: 270 LVKRLKAAFPELQIIGGNVVTARQ-------------AKSLIDAGVDGLRIGMGSGSICT 316 Query: 59 RV-----------VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 E D+P GGI++ K L+ GA+ + + S Sbjct: 317 TQVVCAVGRAQATAVYHVCKYAREHGDLPCIADGGIQNSGHVMKALALGANAVMMGS 373 >UniRef50_B1MZ90 tRNA-dihydrouridine synthase n=39 Tax=Bacteria RepID=B1MZ90_LEUCK Length = 378 Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 15/182 (8%), Positives = 47/182 (25%), Gaps = 12/182 (6%) Query: 71 EVIDIPFCVAGGIKSLEDAAKIL-SFGADKISINSPALADPTLITRLADRFGVQCIVVGI 129 E + + + AAKIL + G + IN + + Sbjct: 86 EAQPVAQIWGSRPEDIAGAAKILPTMGYRAVDINMGCPDATVIKNGAGSDL---IRHDDL 142 Query: 130 DTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYD 189 + + + +++ + +++ ++ + Sbjct: 143 AEKIISAAKTSGLPVSVKTRLGFYHAEEFRDWLPIILRQN-VAVLTVHLRSRKEMSKAPA 201 Query: 190 L-EQLKKV-----REVCHVPLIASGGAGTMEHFLEAFR-DADVDGALAASVFHKQIINIG 242 E + ++ + + +G T L + +DG + + Sbjct: 202 HVEYIDEILAMRDKLAPKTLIQINGDIKTRAEGLALAKIHPGIDGIMIGRGIFENPYAFE 261 Query: 243 EL 244 ++ Sbjct: 262 KI 263 >UniRef50_C2CLX0 Possible 2-nitropropane dioxygenase n=7 Tax=Corynebacterium RepID=C2CLX0_CORST Length = 330 Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 32/135 (23%), Gaps = 13/135 (9%) Query: 114 TRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGE 173 ++ + W T T T E +RG Sbjct: 98 FGWTEKLNMALDAGAAVLWSMFGTFTEEEITCIHAAGAEAWTTVTTPAEAVEAARRGVDA 157 Query: 174 IVLNM------MNQDGVRNGYDLEQLKKVREVCH-------VPLIASGGAGTMEHFLEAF 220 + + D L+++ H +PLIA+GG + A Sbjct: 158 LCVQGPEAGGHRGVWDAEAEPDWRPLEELVFAVHAALGDAPIPLIAAGGMRSSADVERAL 217 Query: 221 RDADVDGALAASVFH 235 V S F Sbjct: 218 AWPGVVAVSCGSAFL 232 >UniRef50_Q3AC05 Dihydroorotate dehydrogenase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=PYRD_CARHZ Length = 307 Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 39/131 (29%), Gaps = 26/131 (19%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVF---------------------YDITA 54 +VK + DI AK GAD L + + Sbjct: 161 LIVKLT-----PNVTDITVYAKAAENAGADALTLINTFTGMVIDVKSKKPILGNKHGGVS 215 Query: 55 SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLIT 114 R + V + + IP GGI S E A + GA I + S +P + Sbjct: 216 GPAIRPMAVKMVYDCFKAVSIPIIGVGGIDSKEAALEFFLAGATAIQVGSQNFVEPGFMP 275 Query: 115 RLADRFGVQCI 125 RL G Sbjct: 276 RLIRELGEYLQ 286 Score = 47.4 bits (111), Expect = 5e-04, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 9/84 (10%) Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAAS---- 232 + ++ + + +P+I GG + E LE F A S Sbjct: 211 HGGVSGPAIRPMAVKMVYDCFKAVSIPIIGVGGIDSKEAALEFF-LAGATAIQVGSQNFV 269 Query: 233 --VFHKQIINIGELKAYLATQGVE 254 F I EL YL + +E Sbjct: 270 EPGFM--PRLIRELGEYLQEENIE 291 >UniRef50_UPI0001BCA063 tRNA-dihydrouridine synthase A n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BCA063 Length = 187 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 9/100 (9%), Positives = 30/100 (30%), Gaps = 12/100 (12%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYD---------LEQLKKVR-EVCHVPLIASGGAGTMEH 215 V + G ++ + + +++ + + ++ +GG T++ Sbjct: 18 VHEAGCESFTVHARIAILEGLSPKENRDIPPLRYDVVAQLKSDFPDLEIVLNGGIKTLDQ 77 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEI 255 E + DG + + + + L + Sbjct: 78 CGEHLQT--FDGVMLGREAYHNPYLLAHVDQQLFDSTAPV 115 >UniRef50_Q6BVL8 DEHA2C01584p n=4 Tax=Dikarya RepID=Q6BVL8_DEBHA Length = 378 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 5/130 (3%) Query: 34 PLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLEDA 89 A+ GAD ++ + DG + + V ++ IP + GGI+ D Sbjct: 240 EDAEMAVNAGADGIIVSNHGG-RQLDGALSTLDALPDVVAAVNGRIPVHIDGGIRRGSDI 298 Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 K L+ GAD + A+ + + + Sbjct: 299 FKALALGADHCWVGRVAVWGLAYKGEEGVSIALNILHDEFRLVMALMGCTSVKDIKPEHL 358 Query: 150 SRTRVTQWET 159 +R Sbjct: 359 ARMSSDGRFH 368 Score = 42.4 bits (98), Expect = 0.013, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 28/96 (29%), Gaps = 11/96 (11%) Query: 165 EVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCH--VPLIASGGAGTMEHFLEAFR 221 GA I+++ + L+ L V + +P+ GG +A Sbjct: 244 MAVNAGADGIIVSNHGGRQLDGALSTLDALPDVVAAVNGRIPVHIDGGIRRGSDIFKAL- 302 Query: 222 DADVDGALAASVFHKQIINIGELKAYLATQGVEIRI 257 D V AY +GV I + Sbjct: 303 ALGADHCWVGRVAVWG-------LAYKGEEGVSIAL 331 >UniRef50_B8FD92 NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FD92_DESAA Length = 668 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 8/109 (7%) Query: 154 VTQWETLDWVQEVQKRGAGEIVLNMMNQDGV--------RNGYDLEQLKKVREVCHVPLI 205 T E+ D+ +K G + + + +G + + V+E +VP+I Sbjct: 230 HTNEESSDFAVIAEKAGVDYVNVTGGWHETNIPQLTSNVPSGAYVYLARGVKEKVNVPVI 289 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVE 254 AS G + +A R D ++K + + Sbjct: 290 ASNRMGDPDVAEKALRSGACDMICWGRPMLADPELPNKVKEGREWEIIP 338 Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 36/127 (28%), Gaps = 9/127 (7%) Query: 34 PLAKRYAEEGADELVFYDITASSD--------GRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 A + G D + ++ V E +++P + + Sbjct: 237 DFAVIAEKAGVDYVNVTGGWHETNIPQLTSNVPSGAYVYLARGVKEKVNVPVIASNRMGD 296 Query: 86 LEDAAKILSFGA-DKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + A K L GA D I P LADP L ++ + + I + Sbjct: 297 PDVAEKALRSGACDMICWGRPMLADPELPNKVKEGREWEIIPCIACNQGCFDILFGGQPV 356 Query: 145 YTGDESR 151 R Sbjct: 357 RCIMNPR 363 >UniRef50_Q0B324 Dihydroorotate oxidase B, catalytic subunit n=8 Tax=Proteobacteria RepID=Q0B324_BURCM Length = 325 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 19/76 (25%), Gaps = 1/76 (1%) Query: 175 VLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 + L + + +P+I GG + +E A + Sbjct: 207 NVMGGLSGPSIKPIALRLVHQCYRAVSIPVIGCGGIRSAADAIEFL-LAGASAVQVGTAS 265 Query: 235 HKQIINIGELKAYLAT 250 + + + L Sbjct: 266 FRDPGVMRTIIDGLEQ 281 Score = 43.9 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 30/76 (39%) Query: 49 FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 + + + V + + IP GGI+S DA + L GA + + + + Sbjct: 208 VMGGLSGPSIKPIALRLVHQCYRAVSIPVIGCGGIRSAADAIEFLLAGASAVQVGTASFR 267 Query: 109 DPTLITRLADRFGVQC 124 DP ++ + D C Sbjct: 268 DPGVMRTIIDGLEQFC 283 >UniRef50_C7IRP5 NADH:flavin oxidoreductase/NADH oxidase n=3 Tax=Thermoanaerobacter RepID=C7IRP5_THEET Length = 648 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 12/103 (11%), Positives = 32/103 (31%), Gaps = 11/103 (10%) Query: 155 TQWETLDWVQEVQKRGAGEIVLNM---------MNQDGVRNGYDLEQLKKVREVCH--VP 203 T +T + Q++ + G + ++ + + G +E +++ + VP Sbjct: 236 TIEDTKIFAQKLVEAGIDALHISGGVYESSAMIIQPAAIPQGCFVENAAAIKKAINSKVP 295 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 +I G + R+ D ++ Sbjct: 296 VIVVGRIKDPLMAEQIIREGKADLVSIGRALLADPDLPRKVSE 338 Score = 47.4 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 12/135 (8%) Query: 25 NHEIIGDIVPLAKRYAEEGADELVFYDIT---------ASSDGRVVDKSWVSRVAEVI-- 73 I D A++ E G D L ++ + + + + I Sbjct: 233 GGLTIEDTKIFAQKLVEAGIDALHISGGVYESSAMIIQPAAIPQGCFVENAAAIKKAINS 292 Query: 74 DIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 +P V G IK A +I+ G AD +SI LADP L ++++ + Sbjct: 293 KVPVIVVGRIKDPLMAEQIIREGKADLVSIGRALLADPDLPRKVSEGKIQEIRKCIGCNQ 352 Query: 133 YDAETGKYHVNQYTG 147 + ++ Sbjct: 353 GCIDRLFQDLDITCI 367 >UniRef50_B7XK29 NIFR3-like protein n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XK29_ENTBH Length = 321 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 15/185 (8%), Positives = 47/185 (25%), Gaps = 12/185 (6%) Query: 75 IPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRLADRFGVQCIVVGIDTWY 133 + K + +A K L G ++N + +V Sbjct: 67 VVQIGGSNPKDIVNAIKRLKQCGWRLFNLNCGCPSTRVQKGMFGAILMKYKELVIEIINT 126 Query: 134 DAETGKYHVNQYTGDESRTRVTQWETLDWVQEV-QKRGAGEIVLNMMNQDGVRNGY---- 188 + ++ + ++++ + + ++ Sbjct: 127 VYIETQIILSIKCRTGIDEFDSYEFLKEFIESISKNTPCNIFYIHARKCWLQGINPKQNR 186 Query: 189 -----DLEQLKKVREVCHVPLIA-SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIG 242 + + + ++++ I +GG + F+ DG + K + Sbjct: 187 NIPPLNYDYIFRIKKEFPHLFIGINGGITYNSYLKYKFQMDTCDGIMIGREAIKNPLIFA 246 Query: 243 ELKAY 247 E+ Sbjct: 247 EIINM 251 >UniRef50_B2V726 Dihydroorotate dehydrogenase n=2 Tax=Aquificales RepID=PYRD_SULSY Length = 311 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 8/78 (10%), Positives = 22/78 (28%), Gaps = 3/78 (3%) Query: 176 LNMMNQDGVRNGYDLEQLKKVREV--CHVPLIASGGAGTMEHFLEAFRDADVDGALAASV 233 + + + +V + +P+I GG + L+ A + Sbjct: 211 ITGGLSGPAMLPIAVRMIWQVYQKYGSRIPIIGVGGISNYKDALQHI-LAGASAIQVGTA 269 Query: 234 FHKQIINIGELKAYLATQ 251 ++ ++ L Sbjct: 270 NFYDPLSPLKIIEDLKNH 287 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 32/153 (20%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD----------- 51 + I + +VK + +I+ A GAD LV + Sbjct: 153 KMKKI----TKKPLLVKL-----SPNVSNILDTADACVSAGADGLVLINTLLGVAIDVER 203 Query: 52 -------ITASSDGR---VVDKSWVSRVAEVID--IPFCVAGGIKSLEDAAKILSFGADK 99 IT G + + +V + IP GGI + +DA + + GA Sbjct: 204 EKPILSTITGGLSGPAMLPIAVRMIWQVYQKYGSRIPIIGVGGISNYKDALQHILAGASA 263 Query: 100 ISINSPALADPTLITRLADRFGVQCIVVGIDTW 132 I + + DP ++ + G + Sbjct: 264 IQVGTANFYDPLSPLKIIEDLKNHLDKKGYVHY 296 >UniRef50_B9Y366 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y366_9FIRM Length = 234 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 16/167 (9%), Positives = 38/167 (22%), Gaps = 22/167 (13%) Query: 85 SLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 + E A +++ GAD I + L Sbjct: 87 TFEKAREVVEAGAD-ILALDTRITTKRGKAELLALLHEIHETYPHIAVMADCATYEEC-- 143 Query: 145 YTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPL 204 + + + G D E ++++++ +P+ Sbjct: 144 ------------------RFCAESGCVDILSTTLSGLVNPIEGPDTELVRRLKQDFTLPV 185 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQ 251 A G ++ A D + + + + Q Sbjct: 186 NAEGRIWELKDIDAVVE-AGADMITIGTAITRPHLITERFLNHYRQQ 231 >UniRef50_B1MZ73 Dihydroorotate dehydrogenase B, catalytic subunit n=1 Tax=Leuconostoc citreum KM20 RepID=B1MZ73_LEUCK Length = 306 Score = 53.6 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 1/72 (1%) Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 + + + + + +P+I GG T++ LE A + Sbjct: 215 TGGMSGTSVHPIAVRFVYETAQTVSIPVIGVGGVSTVDDVLELMM-AGASAVQIGTALAG 273 Query: 237 QIINIGELKAYL 248 + ++ L Sbjct: 274 NHQVMADIIREL 285 Score = 44.3 bits (103), Expect = 0.004, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 21/119 (17%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYD------------------ITASSDG---RVVD 62 + + DI P+ K GAD +V + T G + Sbjct: 168 KMSPNVTDIKPIVKAVETAGADGIVLINTVVGMSLDLNTRQARLARGTGGMSGTSVHPIA 227 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFG 121 +V A+ + IP GG+ +++D +++ GA + I + + ++ + Sbjct: 228 VRFVYETAQTVSIPVIGVGGVSTVDDVLELMMAGASAVQIGTALAGNHQVMADIIRELP 286 >UniRef50_C6A1L2 Dihydroorotate dehydrogenase family protein n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A1L2_THESM Length = 309 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 29/132 (21%) Query: 16 QVVKGVQ---FRN-----HEIIGDIVPLAKRYAEEGADELVFYDI--------------- 52 +VVK V+ + + DIV +AK + GAD L + Sbjct: 149 KVVKIVRKLTGKPIIAKLAPDVTDIVEIAKTAVDAGADGLTIGNGAQAMRIDVETGLPIL 208 Query: 53 ---TASSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPA 106 T G + + + V + E +D+P GGI + +DA + GA + + + Sbjct: 209 KLKTGGLGGPAVKPITLAKVFKTREALDVPIIGIGGIMNWQDAIEYAMAGASLLGLGTAV 268 Query: 107 LADPTLITRLAD 118 + DP R+ + Sbjct: 269 MVDPEAPVRIIE 280 Score = 44.7 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 5/82 (6%) Query: 177 NMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 L ++ K RE VP+I GG + +E A + Sbjct: 212 TGGLGGPAVKPITLAKVFKTREALDVPIIGIGGIMNWQDAIEYAM-AGASLLGLGTAVMV 270 Query: 237 QII----NIGELKAYLATQGVE 254 I +KA+L + +E Sbjct: 271 DPEAPVRIIEGIKAFLERKKIE 292 >UniRef50_B8DD13 Putative N-acetylmannosamine-6-phosphate 2-epimerase n=158 Tax=Bacteria RepID=NANE_LISMH Length = 237 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 26/251 (10%), Positives = 62/251 (24%), Gaps = 41/251 (16%) Query: 12 VRDGQVVKGVQFRNHEIIGDIV--PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRV 69 ++ G VV + + + +A + GA + R + + Sbjct: 9 IKGGLVVSCQALEDEPLHSAFIMSKMALAAVQGGAVGI-----------RANTAKDIRAI 57 Query: 70 AEVIDIPFCV---------AGGIK-SLEDAAKILSFGADKISINSPALADPTLITRLADR 119 ID+P I +L++ +I G + +++++ P Sbjct: 58 QSEIDVPIIGIYKKDYDDSDVFITPTLKEVREICETGVEIVAMDATTRKRPHN------- 110 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMM 179 + + + T + T + G Sbjct: 111 ----------EDLKEILSAIRKEFPNTLFMADTGSIEDVYYADSLGFDLIGTTLYGYTEE 160 Query: 180 NQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 + + D LK+V + P+IA G + + + + Sbjct: 161 TANKNISDDDFSHLKEVLKSTKRPVIAEGKIDSPSKARQVL-TLGCYAVVVGGAVTRPQE 219 Query: 240 NIGELKAYLAT 250 + Sbjct: 220 ITTRFTNEIQK 230 >UniRef50_B6FRG7 Putative uncharacterized protein (Fragment) n=2 Tax=Clostridiales RepID=B6FRG7_9CLOT Length = 214 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 18/198 (9%) Query: 4 KRIIPCLDVRDGQVVKGVQFRNHEIIG-----------DIVPLAKRYAEEGADELVFYDI 52 + PC+D+ +G V+ + + + G D A Y ++G + Sbjct: 18 MQFRPCIDIHNG-AVRQIVGGSLKDEGDQAITNFTSEYDARFYANLYRKDGIRGGHIILL 76 Query: 53 TA--SSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADP 110 S K + + + GG+ + E+A + L GA + + S D Sbjct: 77 NPSTSEYFDATKKQALEALR-AYPQGMQIGGGV-TAENAKEYLDAGASHVIVTSYVFRDG 134 Query: 111 TLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRG 170 + + I K Y T + + + Sbjct: 135 EVKWENLQKLKETVGKERIVLDLSCRKKKD--FYYIVTNRWQTFTNVKVTISLLDQLSDY 192 Query: 171 AGEIVLNMMNQDGVRNGY 188 E +++ ++ +G +G Sbjct: 193 CDEFLIHGVDVEGKSSGV 210 >UniRef50_B5GVV9 Isopentenyl-diphosphate delta-isomerase II n=2 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GVV9_STRCL Length = 403 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 5/96 (5%) Query: 33 VPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLED 88 A R + GAD L+ + D + VAE + IP G+++ D Sbjct: 271 ADEAVRLRDAGADALIVSNHGG-RQLDSGPAALDCLPLVAEAVGDQIPVLFDSGVRTGTD 329 Query: 89 AAKILSFGADKISINSPALADPTLITRLADRFGVQC 124 L+ GA + I P L R ++C Sbjct: 330 VLIALALGASAVMIGRPWLYGLATGGRAGVEHVLRC 365 Score = 50.1 bits (118), Expect = 8e-05, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 4/75 (5%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDL-EQLKKVREVCH--VPLIASGGAGTMEHFLEAFRD 222 ++ GA ++++ + +G + L V E +P++ G T L A Sbjct: 277 LRDAGADALIVSNHGGRQLDSGPAALDCLPLVAEAVGDQIPVLFDSGVRTGTDVLIAL-A 335 Query: 223 ADVDGALAASVFHKQ 237 + + Sbjct: 336 LGASAVMIGRPWLYG 350 >UniRef50_B0TGQ8 Dihydroorotate dehydrogenase n=32 Tax=Bacteria RepID=PYRD_HELMI Length = 309 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 26/134 (19%) Query: 13 RDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADEL------------------VFYDITA 54 + +VK + DI +A+ + GAD L V +I Sbjct: 161 QKPVIVKL-----SPNVTDITEMARAVVDAGADALALINTLLGMDIDICTRRPVLANIFG 215 Query: 55 SSDG---RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPT 111 G + V + +V + +P GGI + +DA + GA I++ + +P Sbjct: 216 GLSGPAIKPVALRMIYQVYRAVHVPILGMGGIMNSQDAIAFMLAGATAIAVGTANFTNPR 275 Query: 112 LITRLADRFGVQCI 125 + + C Sbjct: 276 ATMDILEGIEEYCC 289 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 5/73 (6%) Query: 186 NGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQI----INI 241 L + +V HVP++ GG + + AF A + + Sbjct: 223 KPVALRMIYQVYRAVHVPILGMGGIMNSQDAI-AFMLAGATAIAVGTANFTNPRATMDIL 281 Query: 242 GELKAYLATQGVE 254 ++ Y +GV Sbjct: 282 EGIEEYCCREGVR 294 >UniRef50_B8KYN1 NADH oxidase n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KYN1_9GAMM Length = 694 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 29/112 (25%), Gaps = 9/112 (8%) Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQL---------K 194 + + + V+ I L + E L + Sbjct: 231 CADEMFPGGMGAEECAVMAQRFVETGLVDYISLAGGSYHAYSYEVPPEDLPEGWLISRAR 290 Query: 195 KVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKA 246 K+++ VP+I SG E +A D + + KA Sbjct: 291 KIKKKVDVPVIVSGAITRPEMGEKAIATGAADAIAMSRPLMADPEWAEKAKA 342 >UniRef50_B2V534 Dihydrouridine synthase family protein n=29 Tax=Clostridiales RepID=B2V534_CLOBA Length = 321 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 43/137 (31%), Gaps = 6/137 (4%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDIT-ASSDGRVVDKSW 65 I +D +K ++ + L K Y + +EL+ + T G + Sbjct: 122 IFKIDDMK-ISIKTRIGKDSP--EEFYELIKIYNKYPLEELIIHPRTQKDFYGNKPNLDV 178 Query: 66 VSRVAEVIDIPFCVAGGIKSLEDAAKILSF--GADKISINSPALADPTLITRLADRFGVQ 123 + + P C G I ++ D K + + LA+P L+ + + + Sbjct: 179 FKDALSLSNNPVCYNGDIFTVADHNKFEETFPKVKTLMLGRGILANPGLMNEIKNNDFIN 238 Query: 124 CIVVGIDTWYDAETGKY 140 ++ Sbjct: 239 KELLKDFHDEIFNKYID 255 Score = 50.5 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 35/111 (31%), Gaps = 2/111 (1%) Query: 138 GKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN-GYDLEQLKKV 196 K + + + + E + ++ K E++++ Q +L+ K Sbjct: 123 FKIDDMKISIKTRIGKDSPEEFYELIKIYNKYPLEELIIHPRTQKDFYGNKPNLDVFKDA 182 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRD-ADVDGALAASVFHKQIINIGELKA 246 + + P+ +G T+ + V + + E+K Sbjct: 183 LSLSNNPVCYNGDIFTVADHNKFEETFPKVKTLMLGRGILANPGLMNEIKN 233 >UniRef50_Q4PNH8 Putative L-lactate dehydrogenase n=1 Tax=uncultured marine bacterium 66A03 RepID=Q4PNH8_9BACT Length = 383 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 34/137 (24%), Gaps = 4/137 (2%) Query: 104 SPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWV 163 + L + + + + T +Y + + + Sbjct: 205 NGKLRFKNMEPYVPRDNTKPISEFIGEQLNGSLTWQYLSEIRKHWKGKLLLKGVMQKSDA 264 Query: 164 QEVQKRGAGEIVLNMMNQDGV-RNGYDLEQLKKVREV--CHVPLIASGGAGTMEHFLEAF 220 + G IV++ N + L +R+ P++ G + L A Sbjct: 265 MKAVDIGVDGIVVSNHGGRQFDGNPASISALPSIRQAVGPKYPVVFDSGIRSGLDILRAL 324 Query: 221 RDADVDGALAASVFHKQ 237 D L F Sbjct: 325 -ALGADFVLVGRPFLYG 340 Score = 47.8 bits (112), Expect = 4e-04, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 5/77 (6%) Query: 36 AKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVI--DIPFCVAGGIKSLEDAAK 91 A + + G D +V + DG S + + + + P GI+S D + Sbjct: 264 AMKAVDIGVDGIVVSNHGG-RQFDGNPASISALPSIRQAVGPKYPVVFDSGIRSGLDILR 322 Query: 92 ILSFGADKISINSPALA 108 L+ GAD + + P L Sbjct: 323 ALALGADFVLVGRPFLY 339 >UniRef50_C4V1R4 N-acylglucosamine-6-phosphate 2-epimerase n=4 Tax=Bacteria RepID=C4V1R4_9FIRM Length = 223 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 67/222 (30%), Gaps = 37/222 (16%) Query: 35 LAKRYAEEGADEL---VFYDITASSD-GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 +A+ E GA + DI ++ + + +I ++ +A Sbjct: 32 MARAAKEGGAVGIRAQSVADIDEIRAVTQLPVIGLIKQTYADSEIYITA-----TMREAE 86 Query: 91 KILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDES 150 ++ G + I+++ P T + Sbjct: 87 ALIGTGCEMIALDMTNRERPQG------------------------TDVRDLIARIHAAH 122 Query: 151 RTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVR---NGYDLEQLKKVREVCHVPLIAS 207 R + T + + + GA + M G D ++++ + VP+ A Sbjct: 123 RLVLADISTYEEGMKAAELGADAVSTTMSGYTPYSPQIAGPDFALMRRLAKDAPVPVFAE 182 Query: 208 GGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 G T E +EA + V GA+ S + + +A Sbjct: 183 GRINTPEELVEAMQ-TGVFGAIVGSAITRPQLIARRFTEAIA 223 >UniRef50_Q11DV8 FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11DV8_MESSB Length = 374 Score = 53.6 bits (127), Expect = 7e-06, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 14/101 (13%) Query: 12 VRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRV 69 + VVKG+ A R EEG D ++ + D + ++ Sbjct: 251 WQGRLVVKGIM---------APEDAMRAREEGVDAVIVSNHGG-RQLDSAPATLHALKQI 300 Query: 70 AEVI--DIPFCVAGGIKSLEDAAKILSFGADKISINSPALA 108 E + D V GGI++ ED K L GAD + P L Sbjct: 301 REAVGPDYSLAVDGGIRTGEDILKSLFAGADFTFLGRPFLY 341 Score = 40.9 bits (94), Expect = 0.040, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 4/92 (4%) Query: 148 DESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREV--CHVPL 204 + R V + ++ G ++++ + L LK++RE L Sbjct: 251 WQGRLVVKGIMAPEDAMRAREEGVDAVIVSNHGGRQLDSAPATLHALKQIREAVGPDYSL 310 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHK 236 GG T E L++ A D F Sbjct: 311 AVDGGIRTGEDILKSL-FAGADFTFLGRPFLY 341 >UniRef50_C1IAI2 NADH:flavin oxidoreductase/NADH oxidase n=2 Tax=Clostridium RepID=C1IAI2_9CLOT Length = 646 Score = 53.2 bits (126), Expect = 7e-06, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 57/216 (26%), Gaps = 15/216 (6%) Query: 24 RNHEIIGDIVPLAKRYAEEGADELVFYDIT---ASSDG--------RVVDKSWVSRVAEV 72 + I +++ K E G D L A+ R + +R+ + Sbjct: 228 EDGLTIEEVIQFCKWAKEAGVDVLDVSRGNFSSAAVKYEVPPVDVPRGFNVENAARIKKE 287 Query: 73 IDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDT 131 + G I E A +I+ G AD + + LADP + + + Sbjct: 288 TGMITVAVGRINDPEQADEIIRSGKADMVVMGRAQLADPEFCNKAKNGNVDDIVRCVGCN 347 Query: 132 WYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI--VLNMMNQDGVRNGYD 189 + + + + + + + + + Sbjct: 348 QGCYDGFTNPDAPFITCMRNPALGREAEFVINKTDNPKNVLIVGGGVAGLEAAIELKDRG 407 Query: 190 LEQL-KKVREVCHVPLIASGGAGTMEHFLEAFRDAD 224 + + + + +G A E EA Sbjct: 408 HNPILCEASDSLGGQFVLAGAAPRKEEMKEAAIAMG 443 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 22/207 (10%), Positives = 58/207 (28%), Gaps = 29/207 (14%) Query: 65 WVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLI-----TRLADR 119 + ++ I A G + A + + G D + ++ P + D Sbjct: 132 VIKAASKEIINECIKAFG----DAAKRAVEAGYDTVEFHAGHNYTPHSFLSKAFNKRMDE 187 Query: 120 FGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWET---------LDWVQEVQKRG 170 +G ++ + ++ + R + + + ++ G Sbjct: 188 YGGSLENRARFLLECIKSIRENIPEDMPLFMRIDAHDDCVEDGLTIEEVIQFCKWAKEAG 247 Query: 171 AGEIVLNMMN-----------QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 + ++ N V G+++E ++++ + +A G E E Sbjct: 248 VDVLDVSRGNFSSAAVKYEVPPVDVPRGFNVENAARIKKETGMITVAVGRINDPEQADEI 307 Query: 220 FRDADVDGALAASVFHKQIINIGELKA 246 R D + + K Sbjct: 308 IRSGKADMVVMGRAQLADPEFCNKAKN 334 >UniRef50_A3JQL6 2-nitropropane dioxygenase, NPD n=3 Tax=Proteobacteria RepID=A3JQL6_9RHOB Length = 332 Score = 53.2 bits (126), Expect = 7e-06, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 55/207 (26%), Gaps = 22/207 (10%) Query: 18 VKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD-ITASSDGRVVDKSWVSRVAEVIDIP 76 V + LA++ ++GAD LV G ++ V D P Sbjct: 123 VHNYGGLVFADVISP-KLARKALDKGADGLVLVCAGAGGHTGEFAMLPFIEEVCSFFDGP 181 Query: 77 FCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAE 136 V GGI + + + G D + + LA + ++ + ++ + Sbjct: 182 LIVGGGIGTGRAIRAVENLGVDFAYLGTRFLATKETM--ISQEYREMIWQSRMEDLIASR 239 Query: 137 TGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKV 196 + + E + ++ G D + + + Sbjct: 240 AITGALGNWMRASVEAAGLSLEDMKETVKIDFSG-----------DMHQAPRGWKHVWSA 288 Query: 197 REVCHVPLIASGGAGTMEHFLEAFRDA 223 + GG E + Sbjct: 289 GQGV-------GGITKPESIADVVAQL 308 Score = 42.8 bits (99), Expect = 0.011, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 2/98 (2%) Query: 144 QYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDL-EQLKKVREVCHV 202 Q+ + + ++ +GA +VL G + + +++V Sbjct: 121 QHVHNYGGLVFADVISPKLARKALDKGADGLVLVCAGAGGHTGEFAMLPFIEEVCSFFDG 180 Query: 203 PLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 PLI GG GT + A + VD A + F Sbjct: 181 PLIVGGGIGTGR-AIRAVENLGVDFAYLGTRFLATKET 217 >UniRef50_A9BH24 Putative N-acetylmannosamine-6-phosphate epimerase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BH24_PETMO Length = 502 Score = 53.2 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 55/196 (28%), Gaps = 31/196 (15%) Query: 64 SWVSRVAEVIDIPFCV--------AGGIKS-LEDAAKILSFGADKISINSPALADPTLIT 114 + + +++++P I + +D ++ +D I+I+ P + Sbjct: 48 ENIREIKKIVNLPVIGITKNRSLKGAFITTTKKDIDNLVDADSDFIAIDCTRRERPEPLP 107 Query: 115 RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEI 174 L D + + + T G Sbjct: 108 ELFDYLRK-------YYPHIGIIADIADIEDVKYVLPLKPDYIATTLAGYTDYTSGRDL- 159 Query: 175 VLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 DL+ ++K ++ ++P+IA G T ++ +A S Sbjct: 160 -------------PDLDLIEKTVKITNIPVIAEGNISTPQYARQAI-LYGAYAVTVGSAI 205 Query: 235 HKQIINIGELKAYLAT 250 + + K +L Sbjct: 206 TRPHVIAKNFKDHLKD 221 >UniRef50_P26938 Indole-3-glycerol phosphate synthase n=4 Tax=Proteobacteria RepID=TRPC_AZOBR Length = 262 Score = 53.2 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 31/225 (13%), Positives = 58/225 (25%), Gaps = 35/225 (15%) Query: 27 EIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSL 86 D LA+ Y GA L +T + D ++ +D+P + Sbjct: 71 RPDFDPPSLARAYRGGGATCLSV--LTDEPYFQGCD-DYLLSARAAVDLPVLRKDFMVDP 127 Query: 87 EDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 A+ + GAD I I AL+D + Sbjct: 128 YQIAESRALGADCILIIMAALSD---------------------------AQAVEIEDAA 160 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVP--L 204 + + + + + +N N + D+ +++ L Sbjct: 161 IAWGLDVLVEVHNREELDRALALKTPLLGVNNRNLKTL--AVDIATTEELAAHVPADRML 218 Query: 205 IASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLA 249 +A G + L +Q +A LA Sbjct: 219 VAESGLYSPADLSRM-AAVGARCFLVGESLMRQEDVSAATRALLA 262 >UniRef50_Q4N9T6 TRNA-dihydrouridine synthase A, putative n=2 Tax=Theileria RepID=Q4N9T6_THEPA Length = 471 Score = 53.2 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 54/188 (28%), Gaps = 23/188 (12%) Query: 90 AKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDE 149 L+ G ++ + L FG + A + + Sbjct: 189 EINLNAGCPSPRVSGKGIYKFMLKLFNLGCFGASLMKEKELVRDIAHHMLRELEMPVTVK 248 Query: 150 SRT----RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGY---------DLEQLKKV 196 +R + D+V V + G +++ E++ ++ Sbjct: 249 TRLGVDEFDSYEFVRDFVSTVSESGCDHFIIHSRKAWLKGINPKQNRTIPPLQYEKVYRL 308 Query: 197 -REVCHVPLIASGGAGTMEHFLEAFRDADVD---------GALAASVFHKQIINIGELKA 246 R+ H+ +GG TME LEA ++D G + + ++ + + Sbjct: 309 QRDFPHLKFTINGGFKTMESILEALNSENLDSNNNPHKLNGVMIGRLAYENPCLLSNVDK 368 Query: 247 YLATQGVE 254 + Sbjct: 369 LIYGVENP 376 >UniRef50_A3U098 Putative uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U098_9RHOB Length = 320 Score = 53.2 bits (126), Expect = 8e-06, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 10/106 (9%) Query: 3 AKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYD-ITASSDGRVV 61 K +IP V G + + LA++ A+ G D LV G + Sbjct: 111 PKPVIP--------TVHGYGGIVFADVIN-EELARKAADAGVDGLVLVCSGAGGHTGDLS 161 Query: 62 DKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 +V RV D + GGI S E + GAD I + + Sbjct: 162 PMVFVERVRRFFDGYIALGGGISSGEAILAAQTLGADFGYIGTSFI 207 >UniRef50_D1ANR5 N-acylglucosamine-6-phosphate 2-epimerase n=8 Tax=Bacteria RepID=D1ANR5_SEBTE Length = 249 Score = 53.2 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 31/250 (12%), Positives = 62/250 (24%), Gaps = 41/250 (16%) Query: 13 RDGQVVKG-VQFRNHEIIGDIV-PLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVA 70 R+G +V VQ D+V +A+ GA + R + + Sbjct: 16 RNGLIVSCQVQKDEPIYTNDMVVKMAQAAKWAGAVGI-----------RANTPEQIRLIK 64 Query: 71 EVIDIPFCVAGGIK----------SLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 E D+P I +LE ++ GAD I+++ + Sbjct: 65 ENCDLPIIGLYKIWHEDTDVFITPTLEACREVWEAGADIIALDCTSQLTHEKTKAWDLLP 124 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 V+ + + D T + + + ++ E + Sbjct: 125 IVKREIPEAIIFADVANYAEARRAIDNGADIVAPTLYGYTEETKHIEGANMREFARMCRD 184 Query: 181 QDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 ++ G T E +E + S + + Sbjct: 185 FKD-----------------EAYVLMEGHIYTPEEAMECL-YLGAHAVVVGSAITRPHLT 226 Query: 241 IGELKAYLAT 250 L Sbjct: 227 AKRFVDLLGG 236 >UniRef50_A1V8W6 Oxidoreductase, FAD/FMN-binding n=49 Tax=Bacteria RepID=A1V8W6_BURMS Length = 335 Score = 53.2 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 30/116 (25%), Gaps = 6/116 (5%) Query: 29 IGDIVPLAKRYAEEGADELV-----FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI 83 + D + A D + + + V + +P G I Sbjct: 208 LDDTIAFAHELKRRDCDWIDVSSGGVSPLQKIPLSPGYQVPFAQAVKRAVGLPTIAVGLI 267 Query: 84 KSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETG 138 A +++ G AD +++ L DP A + G Sbjct: 268 SDPAHANRVIEAGDADFVAMARAMLYDPRWPWHAAAQLGATVSAPPQYWRSQPREY 323 Score = 48.9 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 26/225 (11%), Positives = 44/225 (19%), Gaps = 35/225 (15%) Query: 26 HEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKS 85 + V AKR A G D + + + S ++ + Sbjct: 118 ERVKRAFVESAKRAARLGIDAIEVHAAHGYLLHQ--FLSPLANHRD-------------- 161 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 + + D + T Sbjct: 162 --------------DAYGGSLENRMRFPLEVFDAVRAAFPDDRPVGVRVSATDWVSGGWE 207 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLI 205 D +V G + + + GY + + V+ +P I Sbjct: 208 LDDTIAFAHELKRRDCDWIDVSSGGVSPLQ-----KIPLSPGYQVPFAQAVKRAVGLPTI 262 Query: 206 ASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 A G H D D A A L Sbjct: 263 AVGLISDPAHANRVIEAGDADFVAMARAMLYDPRWPWHAAAQLGA 307 >UniRef50_B0NDA0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NDA0_EUBSP Length = 229 Score = 53.2 bits (126), Expect = 9e-06, Method: Composition-based stats. Identities = 24/218 (11%), Positives = 49/218 (22%), Gaps = 23/218 (10%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGI--KSLEDAAKI 92 +A E GA + R K + + +D+P GI + E + Sbjct: 33 MAVAAKEGGAAGI-----------RANTKEDIKEIQSQVDLPVI---GIVKRDYEGSKVY 78 Query: 93 LSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRT 152 + + + + G T + Sbjct: 79 I------TPTMKEIDELMEVGPEIIAVDATSDLRPGNITIDQFFGQIKEKYPDQLLMADC 132 Query: 153 RVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGT 212 + G + ++ D E L+K+ +IA G T Sbjct: 133 STIEEAIHADELGFDFIGTTMVGYTDQSKGDRIEENDFEILRKIVSNVKNKVIAEGNINT 192 Query: 213 MEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 + + S+ + + L Sbjct: 193 PQKARRVIE-LGAFSVVVGSIITRPQLITKSFAEELEK 229 >UniRef50_A5ULU9 tRNA-dihydrouridine synthase n=2 Tax=Methanobrevibacter smithii RepID=A5ULU9_METS3 Length = 236 Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 7/93 (7%) Query: 16 QVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGR-VVDKSWVSRVAEVID 74 VK + D + +AK GAD L A G D ++++ + Sbjct: 139 VSVKIRA---NVDGIDTLKIAKLIENTGADYLHI---DAMKVGIFDADYDLLAKICSNTN 192 Query: 75 IPFCVAGGIKSLEDAAKILSFGADKISINSPAL 107 I I S + K+L G SI + Sbjct: 193 IKVIGNNSIDSEQKIEKMLKTGVFGFSIARAVI 225 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 21/187 (11%), Positives = 51/187 (27%), Gaps = 19/187 (10%) Query: 56 SDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITR 115 + + + V P I +L+ + Sbjct: 65 IKKQHPNVKVSANVRSTTPRPIIEVSNIDNLDIVE----------------INCHCRQDE 108 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIV 175 + Q ++ D + + + R V +TL + ++ GA + Sbjct: 109 ILAIGCGQNMLKRDDLAEYIGDVVDNASCEVSVKIRANVDGIDTLKIAKLIENTGADYLH 168 Query: 176 LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFH 235 ++ M D + L K+ ++ +I + + + + + V G A Sbjct: 169 IDAMKVGIF--DADYDLLAKICSNTNIKVIGNNSIDSEQKIEKMLK-TGVFGFSIARAVI 225 Query: 236 KQIINIG 242 +N Sbjct: 226 SGKLNFN 232 >UniRef50_C0D995 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D995_9CLOT Length = 663 Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 41/162 (25%), Gaps = 12/162 (7%) Query: 34 PLAKRYAEEGADELVFYDI-----------TASSDGRVVDKSWVSRVAEVIDIPFCVAGG 82 + + E GAD + + + + + + + IP G Sbjct: 321 QMLRDMEEMGADAIHLSNGMYGVRSSLGIVASFFQHHGWNADFAAEAKRFLKIPVITVGR 380 Query: 83 IKSLEDAAKILSFG-ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYH 141 + A I+ G AD +++ +LADP + A + Sbjct: 381 VSDPCMAEDIIVSGKADFVAMGRASLADPHWPEKAASGRCNDIRQCIGCLQGCTASTYQG 440 Query: 142 VNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDG 183 V Y V+K + M Sbjct: 441 VPIYCMVNPELGHEYELDYSKAPAVKKLYIVGAGIAGMEAAR 482 Score = 49.3 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 9/95 (9%), Positives = 26/95 (27%), Gaps = 11/95 (11%) Query: 161 DWVQEVQKRGAGEIVLNMMNQDG-----------VRNGYDLEQLKKVREVCHVPLIASGG 209 ++++++ GA I L+ +G++ + + + +P+I G Sbjct: 321 QMLRDMEEMGADAIHLSNGMYGVRSSLGIVASFFQHHGWNADFAAEAKRFLKIPVITVGR 380 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQIINIGEL 244 + D + Sbjct: 381 VSDPCMAEDIIVSGKADFVAMGRASLADPHWPEKA 415 >UniRef50_B9Y2X6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2X6_9FIRM Length = 234 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 30/249 (12%), Positives = 66/249 (26%), Gaps = 29/249 (11%) Query: 1 MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRV 60 M + I + R +V + + R Sbjct: 1 MRKEEIFQQI--RGKLIVSCQANEEENPFNPPEEMTRMAKAA-----AIGGCAGFRANRP 53 Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRF 120 + + P V GI K+++ G D + + R Sbjct: 54 ENVRMIKEA-----FPDKVMIGIW------KVVTEGCDVYITPT---MKEVEVLREIGSD 99 Query: 121 GVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMN 180 + + + + + + T++ + + GA I + Sbjct: 100 IIAVDGTDRNNCNGRKAYELIREIKETYPDQVVMADIATINDARHSVEAGADIISTTLSG 159 Query: 181 Q-----DGVRNGYDLEQLKKV-REVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVF 234 D G D + ++++ +E V + A G T E +AF D + + Sbjct: 160 YTEDSLDRYALGTDFDLIEQIRKEFPEVFINAEGRIWTREEAKKAFE-CGADVIVVGTAI 218 Query: 235 HKQIINIGE 243 ++I + Sbjct: 219 -TNPMSITK 226 >UniRef50_Q6SH52 Oxidoreductase, FAD/FMN-binding n=2 Tax=Bacteria RepID=Q6SH52_9BACT Length = 409 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 23/185 (12%), Positives = 54/185 (29%), Gaps = 47/185 (25%) Query: 6 IIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDI----TASSDGR-- 59 ++ ++V DG+ R + D + AK GAD LV + Sbjct: 218 VLAKINVSDGR-------RRGANVEDAIVTAKLLEAAGADMLVLSGGRNVESGWFMFGSN 270 Query: 60 ----------------------------------VVDKSWVSRVAEVIDIPFCVAGGIKS 85 + + ++ E + +P GG+KS Sbjct: 271 MNLEAMYRVLGKWSLSGMAIGATAKSAPSIDFRELYFWEYSKKIREAVSLPLTYLGGVKS 330 Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 ++ A+ ++ G + +++ L +P L+ + + ++ Sbjct: 331 ADNVAQCMAAGFEAVALARALLREPDLVNKWQVHPEEPSLCDNCNSCVAYIYHPAGTWCI 390 Query: 146 TGDES 150 + Sbjct: 391 HRPAN 395 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 28/243 (11%), Positives = 62/243 (25%), Gaps = 14/243 (5%) Query: 8 PCLDVRDGQVVKGVQFRNHEI----IGDIVPLAKRYAEEGADELVFYDITASSDGR-VVD 62 P +R + + + D V A+ G D + + + + Sbjct: 125 PAGLLRGNV---LRRGMTEDDMQNMVDDFVTAAEHCVSAGFDAVEIHMGHGYLLNQFLSP 181 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGV 122 + + AA G D + ++D + V Sbjct: 182 MDNKR--KDAYGGSAENRARFPTRVLAAVKQRVGQDIAVLAKINVSDGRRRGANVEDAIV 239 Query: 123 QCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQ- 181 ++ + + + + + G I + Sbjct: 240 TAKLLEAAGADMLVLSGGRNVESGWFMFGSNMNLEAMYRVLGKWSLSGM-AIGATAKSAP 298 Query: 182 -DGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIIN 240 R Y E KK+RE +PL GG + ++ + A + A ++ Sbjct: 299 SIDFRELYFWEYSKKIREAVSLPLTYLGGVKSADNVAQCM-AAGFEAVALARALLREPDL 357 Query: 241 IGE 243 + + Sbjct: 358 VNK 360 >UniRef50_UPI0001C41E29 NADH:flavin oxidoreductase/NADH oxidase family protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41E29 Length = 316 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 55/224 (24%), Gaps = 35/224 (15%) Query: 50 YDITASSDGRVVDK-----SWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 + S V+ + + + +E A + G D + I++ Sbjct: 100 HGRYGSISSNNVNLNGISIEEIEDIKKAF------------VEAAVRSQKSGFDGVEIHA 147 Query: 105 PA------LADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQ-- 156 P R + G + + E + + Y Sbjct: 148 AHEYLLNQFYSPYTNKRTDEYGGSLENRMRLHNEIIREIREAVGDDYIIAIRFGAYDYLE 207 Query: 157 -----WETLDWVQEVQKRGAGEIVLNMM-----NQDGVRNGYDLEQLKKVREVCHVPLIA 206 + V+ + G I ++ N GY + K +E C +P+I Sbjct: 208 GGSKMEDIPAAVKSFVESGVDMIDISGGLCRYQNPYSREPGYFKDLSKIAKESCDIPVIL 267 Query: 207 SGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLAT 250 +GG + + D + + Sbjct: 268 TGGVKKAKDAERLINEGYCDLIGIGRALLMDGDWSKKAIRKVRK 311 >UniRef50_Q1IKU8 2-nitropropane dioxygenase, NPD n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKU8_ACIBL Length = 356 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 30/105 (28%), Gaps = 14/105 (13%) Query: 166 VQKRGAGEIVLNMMNQDGVRNGYDLEQ----------LKKVREVCHVPLIASGGAGTMEH 215 + G IV G R +D+ + + +P+IASGG Sbjct: 163 LASAGVDAIVAQGAEAGGQRGTFDVSFEEGLVPLRALVAGLANAVALPVIASGGIMNGRE 222 Query: 216 FLEAFRDADVDGALAASVFHKQIINIGEL---KAYLATQGVEIRI 257 E R +VF KA L + RI Sbjct: 223 IAEMLR-LGASAVQLGTVFLCTPEAGTSAPYRKALLDAEEDRTRI 266 Score = 45.9 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 10/89 (11%) Query: 32 IVPLAKRYAEEGADELVFYDITASSDGRVVDK----------SWVSRVAEVIDIPFCVAG 81 V + A G D +V A D + V+ +A + +P +G Sbjct: 156 TVREGQLLASAGVDAIVAQGAEAGGQRGTFDVSFEEGLVPLRALVAGLANAVALPVIASG 215 Query: 82 GIKSLEDAAKILSFGADKISINSPALADP 110 GI + + A++L GA + + + L P Sbjct: 216 GIMNGREIAEMLRLGASAVQLGTVFLCTP 244 >UniRef50_A8VQT3 Transposase IS3/IS911 family protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VQT3_9BACI Length = 318 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 44/156 (28%), Gaps = 3/156 (1%) Query: 86 LEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 E + + K N + + G+D + Q+ Sbjct: 51 PEQLREEIRLARKKSEGNGYIGVNCLYAMTDFADTMKAALDEGVDFIISGAGISRDMYQW 110 Query: 146 TGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRN--GYDLEQLKKVREVCHVP 203 ++ + + Q+ GA +V+ G + L +V E +P Sbjct: 111 GKAHDTPVLSIVSSAKLAKMSQRLGAAAVVVEGHEAGGHLGTDRSVKDILPEVAEAVTIP 170 Query: 204 LIASGGAGTMEHFLEAFRDADVDGALAASVFHKQII 239 +IA+GG + E E G + F Sbjct: 171 VIAAGGVMSGEDIREMI-SLGASGVQMGTRFVATEE 205 Score = 49.7 bits (117), Expect = 9e-05, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 61/179 (34%), Gaps = 9/179 (5%) Query: 33 VPLAKRYAEEGADELVFYDIT--ASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAA 90 LAK GA +V K + VAE + IP AGG+ S ED Sbjct: 125 AKLAKMSQRLGAAAVVVEGHEAGGHLGTDRSVKDILPEVAEAVTIPVIAAGGVMSGEDIR 184 Query: 91 KILSFGADKISINSPAL----ADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYT 146 +++S GA + + + + D + + ++ + Sbjct: 185 EMISLGASGVQMGTRFVATEECDAADAFKEQYVKAEETSMMMSVVGLPGRAIENPFTSQI 244 Query: 147 GDESRTRVTQWETLDWVQEVQKRGAGEIVLN---MMNQDGVRNGYDLEQLKKVREVCHV 202 D + ++ + + Q ++ M + + +G + ++K++ +V V Sbjct: 245 ADGGKVKIDRCVSCLKKCSHQYCIYDALLKAKDGDMERGLIFSGAGVAKIKEILKVSDV 303 >UniRef50_A5G9T5 NADH:flavin oxidoreductase/NADH oxidase n=5 Tax=Deltaproteobacteria RepID=A5G9T5_GEOUR Length = 374 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 19/148 (12%) Query: 15 GQVVKGVQFRN----HEIIGDIVPLAKRYAEEGADELVFYDITAS-------------SD 57 +VK + + D + A+ EEG D + T + + Sbjct: 214 PVLVKL-NGDDNLAGGLSLDDAITAARALDEEGIDAIEVSGGTPASGDRTPVRQGIDSRE 272 Query: 58 GRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSF-GADKISINSPALADPTLITRL 116 + R+ + + P V GG++S E I+ AD +++ P + +P L R Sbjct: 273 QEAYNLPLAYRIKQAVSCPVMVVGGLRSFEIVEGIIRREEADYVAMARPFIREPALAKRW 332 Query: 117 ADRFGVQCIVVGIDTWYDAETGKYHVNQ 144 A + + + + Sbjct: 333 AGGDESHARCISCNGCFKPGLKSGGIYC 360 >UniRef50_Q6MM64 Inosine-5-monophosphate dehydrogenase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MM64_BDEBA Length = 346 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 61/205 (29%), Gaps = 20/205 (9%) Query: 61 VDKSWVSRVAEVIDIPFCVAGGIKS--------LEDAAKILSFGADKISINSPALADPTL 112 + V+ + GI A ++ G IS + + Sbjct: 53 ANMDMVTEYDMAFAMNQLGGMGILHRFLDIEEQAAQARRLKENGVKVISGSVGVGEEFKT 112 Query: 113 ITRLADRFGVQCIVVGIDTWYDAETGKYHVN-QYTGDESRTRVTQWETLDWVQEVQKRGA 171 + GV I + I + + + + + T D +++ + GA Sbjct: 113 RAKALVEAGVNIITIDIAHGHSVQMMETMKWLKDQYPQVDLIAGNLATPDAARDLIEAGA 172 Query: 172 GEIVL------NMMNQDGVRNGYDL----EQLKKVREVCHVPLIASGGAGTMEHFLEAFR 221 I + + G ++ E VP+IA GG T ++AF Sbjct: 173 DAIKVGIGPGSMCTTRIITGCGVPQLTAIGLCAEIGESYGVPVIADGGIRTSGDMVKAF- 231 Query: 222 DADVDGALAASVFHKQIINIGELKA 246 A + S+ I GE+K Sbjct: 232 AAGASTVMLGSMLSGTIETPGEIKN 256 Score = 42.4 bits (98), Expect = 0.017, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 21/119 (17%) Query: 7 IPCLDVRDGQVVKGVQFRNHEIIGDI-----------VPLAKRYAEEGADELVF------ 49 I +D+ G V+ ++ A+ E GAD + Sbjct: 124 IITIDIAHGHSVQMMETMKWLKDQYPQVDLIAGNLATPDAARDLIEAGADAIKVGIGPGS 183 Query: 50 YDITASSDGRVV-DKSWV---SRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINS 104 T G V + + + + E +P GGI++ D K + GA + + S Sbjct: 184 MCTTRIITGCGVPQLTAIGLCAEIGESYGVPVIADGGIRTSGDMVKAFAAGASTVMLGS 242 >UniRef50_B8HZW6 NADH:flavin oxidoreductase/NADH oxidase n=4 Tax=Bacteria RepID=B8HZW6_CLOCE Length = 329 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 58/198 (29%), Gaps = 23/198 (11%) Query: 59 RVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS-FGADKISINSPALADPTLIT--- 114 + + + R +I I S +AA+ + G D + I+S + Sbjct: 126 HPRNPNVIPRELSKDEIKDI----ISSFANAAERVKKAGFDGVEIHSAHGYLLSQFFSPI 181 Query: 115 --RLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQE------- 165 + +D +G + K V + R + + E Sbjct: 182 SNKRSDEYGGNVLSRIKIHLQIINAVKKAVGEDFTVFLRLGASDYMEGGITIEDSLIATG 241 Query: 166 -VQKRGAGEIVLNM-----MNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEA 219 +K G + ++ + D GY K ++E +P+I +GG E + Sbjct: 242 EFEKAGVSALDISGGFCGYIKPDAKEQGYFWPLTKAIKEHVSIPVILTGGITDAESAEQL 301 Query: 220 FRDADVDGALAASVFHKQ 237 D K Sbjct: 302 LAGGKADLIGVGRSILKD 319 Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 35/116 (30%), Gaps = 17/116 (14%) Query: 16 QVVKGVQF-----RNHEIIGDIVPLAKRYAEEGADELVFYDITASSDG--------RVVD 62 V I D + + + G L DI+ G + Sbjct: 215 FTVFLRLGASDYMEGGITIEDSLIATGEFEKAGVSAL---DISGGFCGYIKPDAKEQGYF 271 Query: 63 KSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG-ADKISINSPALADPTLITRLA 117 + E + IP + GGI E A ++L+ G AD I + L D Sbjct: 272 WPLTKAIKEHVSIPVILTGGITDAESAEQLLAGGKADLIGVGRSILKDSGWAAHAM 327 >UniRef50_A4FCY6 Isopentenyl-diphosphate delta-isomerase II 2 n=6 Tax=Bacteria RepID=A4FCY6_SACEN Length = 401 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 33 VPLAKRYAEEGADELVF--YDITASSDGRVVDKSWVSRVAEVID--IPFCVAGGIKSLED 88 A+R E GAD LV + DG V + V + +P + G+++ D Sbjct: 263 ADDARRAVELGADGLVVSNHGG-RQLDGSVASLDALPAVRAAVGDGVPVLLDSGVRTGSD 321 Query: 89 AAKILSFGADKISINSPALA 108 K L+ GAD + P + Sbjct: 322 VVKALALGADAVLYGRPYVY 341 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 58/208 (27%), Gaps = 33/208 (15%) Query: 35 LAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILS 94 L +R G LV + S R D +PF GI + Sbjct: 163 LVRRAEASGYSALVLTVDSPSFGYRPADLD-------NGYLPFLNGAGIANF-------- 207 Query: 95 FGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRV 154 ++DP L G + +V + + + + + Sbjct: 208 ------------VSDPEFQGGLPSDAGEREVVEHWARVFANPGLTWDDLPWLRSLTGLPI 255 Query: 155 --TQWETLDWVQEVQKRGAGEIVLNMMN-QDGVRNGYDLEQLKKVREVCH--VPLIASGG 209 D + + GA +V++ + + L+ L VR VP++ G Sbjct: 256 VIKGVLHADDARRAVELGADGLVVSNHGGRQLDGSVASLDALPAVRAAVGDGVPVLLDSG 315 Query: 210 AGTMEHFLEAFRDADVDGALAASVFHKQ 237 T ++A D L + Sbjct: 316 VRTGSDVVKAL-ALGADAVLYGRPYVYG 342 >UniRef50_B9Y3X7 Putative uncharacterized protein n=2 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3X7_9FIRM Length = 627 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 5/81 (6%), Positives = 23/81 (28%), Gaps = 3/81 (3%) Query: 169 RGAGEIV---LNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADV 225 G + ++ + + Y+ E +++++ + + G + + + Sbjct: 238 CGMDVVHAGNVHAVPTIFEPHCYNAEFARRIKQETSLQVCLVGAVMSPQEAEAVIAEGIA 297 Query: 226 DGALAASVFHKQIINIGELKA 246 D + + Sbjct: 298 DAVMCGRSLIADPYWPKKALE 318 Score = 47.0 bits (110), Expect = 6e-04, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 4/109 (3%) Query: 41 EEGADELV---FYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFG- 96 G D + + + + + + R+ + + C+ G + S ++A +++ G Sbjct: 237 SCGMDVVHAGNVHAVPTIFEPHCYNAEFARRIKQETSLQVCLVGAVMSPQEAEAVIAEGI 296 Query: 97 ADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQY 145 AD + +ADP + + + ++ Q Sbjct: 297 ADAVMCGRSLIADPYWPKKALEGRDADIVPCLRCMHCYHIATEHWNIQC 345 >UniRef50_Q47C62 Dihydroorotate dehydrogenase n=3 Tax=Proteobacteria RepID=Q47C62_DECAR Length = 336 Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 74/260 (28%), Gaps = 45/260 (17%) Query: 33 VPLAKRYAEEGADELVFY------------DITASSDGRVVD------------------ 62 + + GA +V + I Sbjct: 28 LDAVLHLEDAGAAAIVMHSLFEEDVRHDEQMIDRFLVHPDTFGEATGHLPFGHDYQSRLD 87 Query: 63 --KSWVSRVAEVIDIPFCVAGGIKSLEDA----AKILSFGADKISINSPALA-DPTLITR 115 + R+ + IP + SL ++ GAD + +N+ + DP + Sbjct: 88 SYLEQIQRLKSRLAIPVVASLNGSSLSGWVELGKEMQGAGADALELNAWYMPSDPKISCE 147 Query: 116 LADRFGVQCIVVGIDTWYDAETGKYHVNQY--TGDESRTRVTQWETLDWVQEVQKRGAGE 173 + V + + K + + + + Sbjct: 148 AIEDHHVSLLQELKTVVSIPVSMKLSPFFSSLPHFVHQIEMAGAAGISLFNRFFQPDIDL 207 Query: 174 IVLNMMNQDGVRNGYD----LEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGAL 229 L+++++ + + D + + +R + L A+GG T E L+ A D A Sbjct: 208 ETLSVVDRVQLSSSADTLLAMRWIAILRGSTKLSLAATGGVHTAEDALKML-LAGADVAH 266 Query: 230 AASVFH-KQIINIGELKAYL 248 AS + +GE+ A + Sbjct: 267 MASALLKRGPQALGEVLAAM 286 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.130 0.338 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,457,209,713 Number of Sequences: 3077464 Number of extensions: 70244525 Number of successful extensions: 313231 Number of sequences better than 1.0e-01: 1000 Number of HSP's better than 0.1 without gapping: 2651 Number of HSP's successfully gapped in prelim test: 4000 Number of HSP's that attempted gapping in prelim test: 293809 Number of HSP's gapped (non-prelim): 14074 length of query: 258 length of database: 1,040,396,356 effective HSP length: 126 effective length of query: 132 effective length of database: 652,635,892 effective search space: 86147937744 effective search space used: 86147937744 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 91 (39.7 bits)