Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	E	S	L	L	T	L	P	L	A	G	E	A	R	V	R	I	L	Q	I	T	D	T	H	L	F	A	Q	K	H	E	A	L	L	G	V	N	T	W	E	S	Y	Q	A	V	L	E	A	I	R	P	H	Q	H	E	F	D	L	I	V
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	T	G	D	L	A	Q	D	Q	S	S	A	A	Y	Q	H	F	A	E	G	I	A	S	F	R	A	P	C	V	W	L	P	G	N	H	D	F	Q	P	A	M	Y	S	A	L	Q	D	A	G	I	S	P	A	K	R	V	F	I	G	E
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		Q	W	Q	I	L	L	L	D	S	Q	V	F	G	V	P	H	G	E	L	S	E	F	Q	L	E	W	L	E	R	K	L	A	D	A	P	E	R	H	T	L	L	L	L	H	H	H	P	L	P	A	G	C	S	W	L	D	Q	H	S	L
Secondary structure
SS confidence
Disorder															?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		R	N	A	G	E	L	D	T	V	L	A	K	F	P	H	V	K	Y	L	L	C	G	H	I	H	Q	E	L	D	L	D	W	N	G	R	R	L	L	A	T	P	S	T	C	V	Q	F	K	P	H	C	S	N	F	T	L	D	T	I	A
Secondary structure
SS confidence
Disorder																																																								?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Sequence		P	G	W	R	T	L	E	L	H	A	D	G	T	L	T	T	E	V	H	R	L	A	D	T	R	F	Q	P	D	T	A	S	E	G	Y
Secondary structure
SS confidence
Disorder																																	?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 3ib7 chain A Region: 12 - 259 Aligned: 247 Modelled: 248 Confidence: 100.0% Identity: 29% PDB header:hydrolase Chain: A: PDB Molecule:icc protein; PDBTitle: crystal structure of full length rv0805 Phyre2 PDB 3d03 chain A domain 1 Region: 15 - 265 Aligned: 250 Modelled: 251 Confidence: 100.0% Identity: 21% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: GpdQ-like Phyre2 PDB 2hy1 chain A Region: 12 - 258 Aligned: 219 Modelled: 230 Confidence: 100.0% Identity: 31% PDB header:hydrolase Chain: A: PDB Molecule:rv0805; PDBTitle: crystal structure of rv0805 Phyre2 PDB 2hy1 chain A domain 1 Region: 12 - 258 Aligned: 219 Modelled: 230 Confidence: 100.0% Identity: 31% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: GpdQ-like Phyre2 PDB 2nxf chain A domain 1 Region: 12 - 269 Aligned: 246 Modelled: 248 Confidence: 100.0% Identity: 20% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: ADPRibase-Mn-like Phyre2 PDB 2xmo chain B Region: 9 - 262 Aligned: 238 Modelled: 239 Confidence: 100.0% Identity: 21% PDB header:hydrolase Chain: B: PDB Molecule:lmo2642 protein; PDBTitle: the crystal structure of lmo2642 Phyre2 PDB 3av0 chain A Region: 14 - 275 Aligned: 250 Modelled: 252 Confidence: 100.0% Identity: 13% PDB header:recombination Chain: A: PDB Molecule:dna double-strand break repair protein mre11; PDBTitle: crystal structure of mre11-rad50 bound to atp s Phyre2 PDB 3auz chain A Region: 14 - 275 Aligned: 250 Modelled: 261 Confidence: 100.0% Identity: 12% PDB header:recombination Chain: A: PDB Molecule:dna double-strand break repair protein mre11; PDBTitle: crystal structure of mre11 with manganese Phyre2 PDB 3t1i chain C Region: 10 - 265 Aligned: 238 Modelled: 251 Confidence: 100.0% Identity: 17% PDB header:hydrolase Chain: C: PDB Molecule:double-strand break repair protein mre11a; PDBTitle: crystal structure of human mre11: understanding tumorigenic mutations Phyre2 PDB 2q8u chain A Region: 13 - 267 Aligned: 236 Modelled: 244 Confidence: 99.9% Identity: 17% PDB header:hydrolase Chain: A: PDB Molecule:exonuclease, putative; PDBTitle: crystal structure of mre11 from thermotoga maritima msb8 (tm1635) at2 2.20 a resolution Phyre2 PDB 3qg5 chain D Region: 16 - 268 Aligned: 238 Modelled: 253 Confidence: 99.9% Identity: 16% PDB header:hydrolase Chain: D: PDB Molecule:mre11; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair Phyre2 PDB 1ii7 chain A Region: 15 - 268 Aligned: 242 Modelled: 254 Confidence: 99.9% Identity: 18% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: DNA double-strand break repair nuclease Phyre2 PDB 1ute chain A Region: 12 - 266 Aligned: 248 Modelled: 255 Confidence: 99.9% Identity: 17% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Purple acid phosphatase-like Phyre2 PDB 2yvt chain A domain 1 Region: 13 - 257 Aligned: 216 Modelled: 217 Confidence: 99.9% Identity: 9% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: TT1561-like Phyre2 PDB 3qfn chain A Region: 15 - 262 Aligned: 215 Modelled: 236 Confidence: 99.9% Identity: 19% PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of streptococcal asymmetric ap4a hydrolase and2 phosphodiesterase spr1479/saph in complex with inorganic phosphate Phyre2 PDB 1uf3 chain A Region: 16 - 260 Aligned: 208 Modelled: 217 Confidence: 99.9% Identity: 13% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: TT1561-like Phyre2 PDB 1qhw chain A Region: 14 - 266 Aligned: 246 Modelled: 253 Confidence: 99.9% Identity: 17% PDB header:hydrolase Chain: A: PDB Molecule:protein (purple acid phosphatase); PDBTitle: purple acid phosphatase from rat bone Phyre2 PDB 1qhw chain A Region: 14 - 266 Aligned: 246 Modelled: 253 Confidence: 99.9% Identity: 17% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Purple acid phosphatase-like Phyre2 PDB 1xzw chain A domain 2 Region: 8 - 265 Aligned: 239 Modelled: 245 Confidence: 99.9% Identity: 15% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Purple acid phosphatase-like Phyre2 PDB 2qfr chain A domain 2 Region: 10 - 265 Aligned: 238 Modelled: 238 Confidence: 99.9% Identity: 17% Fold: Metallo-dependent phosphatases Superfamily: Metallo-dependent phosphatases Family: Purple acid phosphatase-like Phyre2 1 c3ib7A_ 2 d3d03a1 3 c2hy1A_ 4 d2hy1a1 5 d2nxfa1 6 c2xmoB_ 7 c3av0A_ 8 c3auzA_ 9 c3t1iC_ 10 c2q8uA_ 11 c3qg5D_ 12 d1ii7a_ 13 d1utea_ 14 d2yvta1 15 c3qfnA_ 16 d1uf3a_ 17 c1qhwA_ 18 d1qhwa_ 19 d1xzwa2 20 d2qfra2 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3ib7A_ 100.0 29 PDB header:hydrolase Chain: A: PDB Molecule:icc protein; PDBTitle: crystal structure of full length rv0805 2 d3d03a1 100.0 21 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:GpdQ-like 3 c2hy1A_ 100.0 31 PDB header:hydrolase Chain: A: PDB Molecule:rv0805; PDBTitle: crystal structure of rv0805 4 d2hy1a1 100.0 31 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:GpdQ-like 5 d2nxfa1 100.0 20 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:ADPRibase-Mn-like 6 c2xmoB_ 100.0 21 PDB header:hydrolase Chain: B: PDB Molecule:lmo2642 protein; PDBTitle: the crystal structure of lmo2642 7 c3av0A_ 100.0 13 PDB header:recombination Chain: A: PDB Molecule:dna double-strand break repair protein mre11; PDBTitle: crystal structure of mre11-rad50 bound to atp s 8 c3auzA_ 100.0 12 PDB header:recombination Chain: A: PDB Molecule:dna double-strand break repair protein mre11; PDBTitle: crystal structure of mre11 with manganese 9 c3t1iC_ 100.0 17 PDB header:hydrolase Chain: C: PDB Molecule:double-strand break repair protein mre11a; PDBTitle: crystal structure of human mre11: understanding tumorigenic mutations 10 c2q8uA_ 99.9 17 PDB header:hydrolase Chain: A: PDB Molecule:exonuclease, putative; PDBTitle: crystal structure of mre11 from thermotoga maritima msb8 (tm1635) at2 2.20 a resolution 11 c3qg5D_ 99.9 16 PDB header:hydrolase Chain: D: PDB Molecule:mre11; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair 12 d1ii7a_ 99.9 18 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:DNA double-strand break repair nuclease 13 d1utea_ 99.9 17 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Purple acid phosphatase-like 14 d2yvta1 99.9 9 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TT1561-like 15 c3qfnA_ 99.9 19 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of streptococcal asymmetric ap4a hydrolase and2 phosphodiesterase spr1479/saph in complex with inorganic phosphate 16 d1uf3a_ 99.9 13 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TT1561-like 17 c1qhwA_ 99.9 17 PDB header:hydrolase Chain: A: PDB Molecule:protein (purple acid phosphatase); PDBTitle: purple acid phosphatase from rat bone 18 d1qhwa_ 99.9 17 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Purple acid phosphatase-like 19 d1xzwa2 99.9 15 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Purple acid phosphatase-like 20 d2qfra2 99.9 17 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Purple acid phosphatase-like 21 c3rl4A_ not modelled 99.9 19 PDB header:hydrolase Chain: A: PDB Molecule:metallophosphoesterase mpped2; PDBTitle: rat metallophosphodiesterase mpped2 g252h mutant 22 c1kbpB_ not modelled 99.9 16 PDB header:hydrolase (phosphoric monoester) Chain: B: PDB Molecule:purple acid phosphatase; PDBTitle: kidney bean purple acid phosphatase 23 d1s3la_ not modelled 99.9 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 24 c1s3mA_ not modelled 99.9 16 PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase 25 c1xzwB_ not modelled 99.9 15 PDB header:hydrolase Chain: B: PDB Molecule:purple acid phosphatase; PDBTitle: sweet potato purple acid phosphatase/phosphate complex 26 d2a22a1 not modelled 99.9 19 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 27 d1z2wa1 not modelled 99.9 15 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 28 d1nnwa_ not modelled 99.8 10 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Phosphoesterase-related 29 c1su1A_ not modelled 99.8 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yfce; PDBTitle: structural and biochemical characterization of yfce, a2 phosphoesterase from e. coli 30 d1su1a_ not modelled 99.8 20 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 31 c3rqzC_ not modelled 99.8 21 PDB header:hydrolase Chain: C: PDB Molecule:metallophosphoesterase; PDBTitle: crystal structure of metallophosphoesterase from sphaerobacter2 thermophilus 32 d3ck2a1 not modelled 99.8 19 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:YfcE-like 33 c2kknA_ not modelled 99.8 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of themotoga maritima protein tm1076:2 northeast structural genomics consortium target vt57 34 d1xm7a_ not modelled 99.6 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Hypothetical protein aq 1666 35 d1usha2 not modelled 99.6 10 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain 36 c1oidA_ not modelled 99.6 12 PDB header:hydrolase Chain: A: PDB Molecule:protein usha; PDBTitle: 5'-nucleotidase (e. coli) with an engineered disulfide2 bridge (s228c, p513c) 37 d2z1aa2 not modelled 99.4 15 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain 38 c3qfkA_ not modelled 99.4 14 PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: 2.05 angstrom crystal structure of putative 5'-nucleotidase from2 staphylococcus aureus in complex with alpha-ketoglutarate 39 c2z1aA_ not modelled 99.3 15 PDB header:hydrolase Chain: A: PDB Molecule:5'-nucleotidase; PDBTitle: crystal structure of 5'-nucleotidase precursor from thermus2 thermophilus hb8 40 c3ivdA_ not modelled 99.3 15 PDB header:hydrolase Chain: A: PDB Molecule:nucleotidase; PDBTitle: putative 5'-nucleotidase (c4898) from escherichia coli in2 complex with uridine 41 d1g5ba_ not modelled 99.2 14 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 42 c2wdfA_ not modelled 99.1 17 PDB header:hydrolase Chain: A: PDB Molecule:sulfur oxidation protein soxb; PDBTitle: termus thermophilus sulfate thiohydrolase soxb 43 d1t71a_ not modelled 99.1 12 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:DR1281-like 44 c3gveB_ not modelled 99.1 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:yfkn protein; PDBTitle: crystal structure of calcineurin-like phosphoesterase yfkn from2 bacillus subtilis 45 c3zu0A_ not modelled 99.0 15 PDB header:hydrolase Chain: A: PDB Molecule:nad nucleotidase; PDBTitle: structure of haemophilus influenzae nad nucleotidase (nadn) 46 d3c9fa2 not modelled 99.0 14 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain 47 c3jyfB_ not modelled 98.9 17 PDB header:hydrolase Chain: B: PDB Molecule:2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- PDBTitle: the crystal structure of a 2,3-cyclic nucleotide 2-2 phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor3 protein from klebsiella pneumoniae subsp. pneumoniae mgh 78578 48 d2z06a1 not modelled 98.7 15 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:TTHA0625-like 49 c3c9fB_ not modelled 98.6 13 PDB header:hydrolase Chain: B: PDB Molecule:5'-nucleotidase; PDBTitle: crystal structure of 5'-nucleotidase from candida albicans sc5314 50 d1t70a_ not modelled 98.3 14 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:DR1281-like 51 c2qjcA_ not modelled 98.0 21 PDB header:hydrolase Chain: A: PDB Molecule:diadenosine tetraphosphatase, putative; PDBTitle: crystal structure of a putative diadenosine tetraphosphatase 52 c2dfjA_ not modelled 97.4 19 PDB header:hydrolase Chain: A: PDB Molecule:diadenosinetetraphosphatase; PDBTitle: crystal structure of the diadenosine tetraphosphate2 hydrolase from shigella flexneri 2a 53 c3e0jG_ not modelled 97.2 20 PDB header:transferase Chain: G: PDB Molecule:dna polymerase subunit delta-2; PDBTitle: x-ray structure of the complex of regulatory subunits of2 human dna polymerase delta 54 c2zbmA_ not modelled 97.1 14 PDB header:hydrolase Chain: A: PDB Molecule:protein-tyrosine-phosphatase; PDBTitle: crystal structure of i115m mutant cold-active protein2 tyrosine phosphatase 55 d1jk7a_ not modelled 96.9 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 56 d3c5wc1 not modelled 96.8 14 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 57 d1s70a_ not modelled 96.6 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 58 c2jogA_ not modelled 96.4 14 PDB header:hydrolase Chain: A: PDB Molecule:calmodulin-dependent calcineurin a subunit alpha PDBTitle: structure of the calcineurin-nfat complex 59 d1s95a_ not modelled 96.3 16 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 60 c3icfB_ not modelled 96.1 16 PDB header:hydrolase Chain: B: PDB Molecule:serine/threonine-protein phosphatase t; PDBTitle: structure of protein serine/threonine phosphatase from saccharomyces2 cerevisiae with similarity to human phosphatase pp5 61 c1auiA_ not modelled 95.8 14 PDB header:hydrolase Chain: A: PDB Molecule:serine/threonine phosphatase 2b; PDBTitle: human calcineurin heterodimer 62 d1auia_ not modelled 95.8 14 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 63 c2p6bC_ not modelled 95.6 14 PDB header:hydrolase/hydrolase regulator Chain: C: PDB Molecule:calmodulin-dependent calcineurin a subunit alpha PDBTitle: crystal structure of human calcineurin in complex with2 pvivit peptide 64 d2p6ba1 not modelled 95.6 14 Fold:Metallo-dependent phosphatases Superfamily:Metallo-dependent phosphatases Family:Protein serine/threonine phosphatase 65 c1wao4_ not modelled 94.6 14 PDB header:hydrolase Chain: 4: PDB Molecule:serine/threonine protein phosphatase 5; PDBTitle: pp5 structure 66 c3floG_ not modelled 91.5 9 PDB header:transferase Chain: G: PDB Molecule:dna polymerase alpha subunit b; PDBTitle: crystal structure of the carboxyl-terminal domain of yeast2 dna polymerase alpha in complex with its b subunit 67 c3lmaC_ not modelled 41.3 20 PDB header:membrane protein Chain: C: PDB Molecule:stage v sporulation protein ad (spovad); PDBTitle: crystal structure of the stage v sporulation protein ad2 (spovad) from bacillus licheniformis. northeast structural3 genomics consortium target bir6. 68 d1zhxa1 not modelled 27.6 16 Fold:Oxysterol-binding protein-like Superfamily:Oxysterol-binding protein-like Family:Oxysterol-binding protein 69 d1gg4a1 not modelled 20.4 16 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 70 d1s1da_ not modelled 17.8 40 Fold:5-bladed beta-propeller Superfamily:Apyrase Family:Apyrase 71 c3menC_ not modelled 14.7 16 PDB header:hydrolase Chain: C: PDB Molecule:acetylpolyamine aminohydrolase; PDBTitle: crystal structure of acetylpolyamine aminohydrolase from burkholderia2 pseudomallei, iodide soak 72 c3q9cF_ not modelled 8.6 15 PDB header:hydrolase Chain: F: PDB Molecule:acetylpolyamine amidohydrolase; PDBTitle: crystal structure of h159a apah complexed with n8-acetylspermidine 73 c2gx8B_ not modelled 8.4 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:nif3-related protein; PDBTitle: the crystal stucture of bacillus cereus protein related to nif3 74 c3ew8A_ not modelled 7.9 8 PDB header:hydrolase Chain: A: PDB Molecule:histone deacetylase 8; PDBTitle: crystal structure analysis of human hdac8 d101l variant 75 d1heya_ not modelled 7.7 10 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 76 c3ngoA_ not modelled 7.7 11 PDB header:hydrolase/dna Chain: A: PDB Molecule:ccr4-not transcription complex subunit 6-like; PDBTitle: crystal structure of the human cnot6l nuclease domain in complex with2 poly(a) dna 77 d2gx8a1 not modelled 7.1 12 Fold:NIF3 (NGG1p interacting factor 3)-like Superfamily:NIF3 (NGG1p interacting factor 3)-like Family:NIF3 (NGG1p interacting factor 3)-like 78 c2y1hA_ not modelled 7.1 19 PDB header:hydrolase Chain: A: PDB Molecule:putative deoxyribonuclease tatdn3; PDBTitle: crystal structure of the human tatd-domain protein 3 (tatdn3) 79 c3o0dF_ not modelled 7.0 30 PDB header:hydrolase Chain: F: PDB Molecule:triacylglycerol lipase; PDBTitle: crystal structure of lip2 lipase from yarrowia lipolytica at 1.7 a2 resolution 80 d1dz3a_ not modelled 6.7 9 Fold:Flavodoxin-like Superfamily:CheY-like Family:CheY-related 81 c3h02F_ not modelled 5.9 11 PDB header:lyase Chain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium. 82 c2nydB_ not modelled 5.6 18 PDB header:unknown function Chain: B: PDB Molecule:upf0135 protein sa1388; PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388 83 c3g7nA_ not modelled 5.4 30 PDB header:hydrolase Chain: A: PDB Molecule:lipase; PDBTitle: crystal structure of a triacylglycerol lipase from2 penicillium expansum at 1.3 84 d1tiaa_ not modelled 5.2 35 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 85 d3tgla_ not modelled 5.1 20 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Fungal lipases 86 c3rsiA_ not modelled 5.1 10 PDB header:isomerase Chain: A: PDB Molecule:putative enoyl-coa hydratase/isomerase; PDBTitle: the structure of a putative enoyl-coa hydratase/isomerase from2 mycobacterium abscessus atcc 19977 / dsm 44196

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0