Phyre 2 alignment of P0AEW4 with c2nydB_

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Job Description | P0AEW4
Confidence | 5.62% | Date | Thu Jan 5 11:24:25 GMT 2012
Rank | 82 | Aligned Residues | 40
% Identity | 18% | Template | c2nydB_
PDB info | PDB header:unknown function | Chain: B: PDB Molecule:upf0135 protein sa1388; | PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | L | L | L | H | H | H | P | L | P | A | G | C | S | W | L | D | Q | H | S | L | R | N | A | G | E | L | D | T | V | L | A | K | F | P | H | V | K | Y | L | L | C | G | H | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Sequence |  | T | I | I | S | H | H | P | L | I | F | K | G | V | . | . | . | T | S | L | K | A | N | G | Y | G | L | I | I | R | K | L | I | Q | H | D | . | . | I | N | L | I | A | M | H | T
Template Known Secondary structure |  |  |  |  |  | S | S |  | S | S |  | S |  |  | . | . | . | S |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |  |  |  | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |  |  | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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