Email l.a.kelley@imperial.ac.uk Description P77334 Date Thu Jan 5 12:27:56 GMT 2012 Unique Job ID 7bb4a9a52176b5ac

Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	T	V	R	E	S	T	T	L	Y	N	F	L	G	S	H	N	P	Y	W	R	L	T	E	S	S	D	V	L	R	F	S	T	T	E	T	T	E	P	D	R	T	L	Q	L	S	A	E	Q	A	A	R	I	R	E	M	T	V	I
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?				?		?																							?	?	?		?	?	?	?																?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		T	S	S	L	M	M	S	L	T	V	D	E	S	D	L	S	V	H	L	V	G	R	K	I	N	K	R	E	W	A	G	N	A	S	A	W	H	D	T	P	A	V	A	R	D	L	S	H	G	L	S	F	A	E	Q	V	V	S	E	A
Secondary structure
SS confidence
Disorder		?	?	?	?	?				?	?	?	?	?	?	?									?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		H	S	A	I	V	I	L	D	S	R	G	N	I	Q	R	F	N	R	L	C	E	D	Y	T	G	L	K	E	H	D	V	I	G	Q	S	V	F	K	L	F	M	S	R	R	E	A	A	A	S	R	R	N	N	R	V	F	F	R	S	G
Secondary structure
SS confidence
Disorder																																												?	?	?	?													?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		N	A	Y	E	V	E	L	W	I	P	T	C	K	G	Q	R	L	F	L	F	R	N	K	F	V	H	S	G	S	G	K	N	E	I	F	L	I	C	S	G	T	D	I	T	E	E	R	R	A	Q	E	R	L	R	I	L	A	N	T	D
Secondary structure
SS confidence
Disorder		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		S	I	T	G	L	P	N	R	N	A	M	Q	D	L	I	D	H	A	I	N	H	A	D	N	N	K	V	G	V	V	Y	L	D	L	D	N	F	K	K	V	N	D	A	Y	G	H	L	F	G	D	Q	L	L	R	D	V	S	L	A	I
Secondary structure
SS confidence
Disorder																							?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		L	S	C	L	E	H	D	Q	V	L	A	R	P	G	G	D	E	F	L	V	L	A	S	N	T	S	Q	S	A	L	E	A	M	A	S	R	I	L	T	R	L	R	L	P	F	R	I	G	L	I	E	V	Y	T	S	C	S	V	G	I
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		A	L	S	P	E	H	G	S	D	S	T	A	I	I	R	H	A	D	T	A	M	Y	T	A	K	E	G	G	R	G	Q	F	C	V	F	T	P	E	M	N	Q	R	V	F	E	Y	L	W	L	D	T	N	L	R	K	A	L	E	N	D
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Sequence		Q	L	V	I	H	Y	Q	P	K	I	T	W	R	G	E	V	R	S	L	E	A	L	V	R	W	Q	S	P	E	R	G	L	I	P	P	L	D	F	I	S	Y	A	E	E	S	G	L	I	V	P	L	G	R	W	V	I	L	D	V	V
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Sequence		R	Q	V	A	K	W	R	D	K	G	I	N	L	R	V	A	V	N	I	S	A	R	Q	L	A	D	Q	T	I	F	T	A	L	K	Q	V	L	Q	E	L	N	F	E	Y	C	P	I	D	V	E	L	T	E	S	C	L	I	E	N	D
Secondary structure
SS confidence
Disorder																									?			?
Disorder confidence
		.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Sequence		E	L	A	L	S	V	I	Q	Q	F	S	Q	L	G	A	Q	V	H	L	D	D	F	G	T	G	Y	S	S	L	S	Q	L	A	R	F	P	I	D	A	I	K	L	D	Q	V	F	V	R	D	I	H	K	Q	P	V	S	Q	S	L	V
Secondary structure
SS confidence
Disorder																																																			?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Sequence		R	A	I	V	A	V	A	Q	A	L	N	L	Q	V	I	A	E	G	V	E	S	A	K	E	D	A	F	L	T	K	N	G	I	N	E	R	Q	G	F	L	F	A	K	P	M	P	A	V	A	F	E	R	W	Y	K	R	Y	L	K	R
Secondary structure
SS confidence
Disorder																																																												?	?
Disorder confidence
		.
Sequence		A
Secondary structure
SS confidence
Disorder		?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand