BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (661 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77334 Protein gmr n=91 Tax=Proteobacteria RepID=GMR_ECOLI 1367 0.0 UniRef50_B4T6U5 Cyclic diguanylate phosphodiesterase (EAL) domai... 1084 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 378 e-103 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 376 e-102 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 375 e-102 UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/P... 373 e-101 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 364 7e-99 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 362 2e-98 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 362 3e-98 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 359 2e-97 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 356 2e-96 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 355 4e-96 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 355 4e-96 UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase... 354 6e-96 UniRef50_A8FYM5 Signal transduction protein containing a membran... 353 9e-96 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 353 1e-95 UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylat... 352 2e-95 UniRef50_B8GNC0 Signal transduction protein containing a membran... 351 4e-95 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 351 4e-95 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 350 7e-95 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 350 1e-94 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 349 2e-94 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 349 2e-94 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 348 4e-94 UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibac... 348 4e-94 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 348 4e-94 UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase... 348 5e-94 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 348 5e-94 UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus... 348 5e-94 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 347 6e-94 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 347 6e-94 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 347 7e-94 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 347 8e-94 UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoa... 347 8e-94 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 347 9e-94 UniRef50_Q2SG37 Predicted signal transduction protein containing... 347 1e-93 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 346 1e-93 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 346 2e-93 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 345 3e-93 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 345 4e-93 UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 6e-93 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 344 6e-93 UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/P... 344 7e-93 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 342 2e-92 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 342 2e-92 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 341 5e-92 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 341 7e-92 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 8e-92 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 340 8e-92 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 9e-92 UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 9e-92 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 9e-92 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 1e-91 UniRef50_UPI00016AFAA6 predicted signal transduction protein con... 340 1e-91 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 340 1e-91 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 340 1e-91 UniRef50_Q0AAU4 Response regulator receiver modulated diguanylat... 339 2e-91 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 339 2e-91 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 339 2e-91 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 339 2e-91 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 338 3e-91 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 338 4e-91 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 338 4e-91 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 338 4e-91 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 338 5e-91 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 338 5e-91 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 338 5e-91 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 338 5e-91 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 337 7e-91 UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 337 1e-90 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 337 1e-90 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 337 1e-90 UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 337 1e-90 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 336 1e-90 UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter... 336 2e-90 UniRef50_UPI0001698B39 diguanylate cyclase/phosphodiesterase wit... 336 2e-90 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 336 2e-90 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 2e-90 UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 3e-90 UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 3e-90 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 3e-90 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 335 3e-90 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 335 4e-90 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 6e-90 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 6e-90 UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q555... 334 7e-90 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 334 8e-90 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 333 9e-90 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 333 9e-90 UniRef50_B8KFD6 Diguanylate cyclaSe/phosphodiesterase with PAS/P... 333 1e-89 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 333 1e-89 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 333 1e-89 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 333 1e-89 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 333 1e-89 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 2e-89 UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillu... 332 3e-89 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 332 3e-89 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 332 3e-89 UniRef50_C6MGV8 Response regulator receiver modulated diguanylat... 332 4e-89 UniRef50_B8DLW6 Response regulator receiver modulated diguanylat... 332 4e-89 UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/P... 331 4e-89 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 331 5e-89 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 331 5e-89 UniRef50_Q3A1F4 Response regulator receiver modulated diguanylat... 331 6e-89 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 330 7e-89 UniRef50_B5E7Y8 Response regulator receiver modulated diguanylat... 330 8e-89 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 330 8e-89 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 8e-89 UniRef50_B2UJT5 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 9e-89 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 330 9e-89 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 330 1e-88 UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 330 1e-88 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 330 1e-88 UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ni... 330 1e-88 UniRef50_A3JAE8 Predicted signal transduction protein containing... 330 1e-88 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 1e-88 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 330 2e-88 UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/P... 329 2e-88 UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Su... 329 2e-88 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 329 2e-88 UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/P... 329 2e-88 UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Ta... 329 2e-88 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 329 2e-88 UniRef50_Q3JAB6 Response regulator receiver modulated diguanylat... 329 3e-88 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 329 3e-88 UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/P... 328 3e-88 UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 328 3e-88 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 328 4e-88 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 328 4e-88 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 328 4e-88 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 328 4e-88 UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/P... 328 4e-88 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 328 4e-88 UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 ... 328 4e-88 UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 328 5e-88 UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 327 6e-88 UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 327 7e-88 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 327 8e-88 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 327 8e-88 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 327 8e-88 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 327 9e-88 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 327 9e-88 UniRef50_B6R9S7 Response regulator receiver modulated diguanylat... 327 1e-87 UniRef50_A1ALB3 Response regulator receiver modulated diguanylat... 327 1e-87 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 327 1e-87 UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (... 327 1e-87 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 326 1e-87 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 326 1e-87 UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/P... 326 1e-87 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 326 1e-87 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 326 2e-87 UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pe... 326 2e-87 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 326 2e-87 UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/P... 326 2e-87 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 326 2e-87 UniRef50_C1DB08 Predicted signal transduction protein containing... 325 2e-87 UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/P... 325 3e-87 UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudov... 325 3e-87 UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/P... 325 3e-87 UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/P... 325 3e-87 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 325 3e-87 UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribac... 325 3e-87 UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulate... 325 4e-87 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 325 4e-87 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 325 4e-87 UniRef50_Q5NZD7 Putative signal transducer protein with histidin... 325 4e-87 UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/P... 325 5e-87 UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 324 5e-87 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 324 6e-87 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 324 6e-87 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 324 7e-87 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 324 8e-87 UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain prot... 324 8e-87 UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/P... 324 9e-87 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 323 9e-87 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 323 9e-87 UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter... 323 1e-86 UniRef50_O34311 Signaling protein ykoW n=3 Tax=Bacillus RepID=YK... 323 1e-86 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 323 1e-86 UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibac... 323 1e-86 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 323 1e-86 UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfuro... 323 1e-86 UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 ... 323 1e-86 UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ma... 323 1e-86 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 323 1e-86 UniRef50_C1DD31 Predicted signal transduction protein containing... 323 1e-86 UniRef50_Q6LQD7 Putative uncharacterized protein n=3 Tax=Photoba... 323 1e-86 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 323 2e-86 UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (... 323 2e-86 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 323 2e-86 UniRef50_Q2SF23 Predicted signal transduction protein containing... 322 2e-86 UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/P... 322 2e-86 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 322 2e-86 UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellula... 322 2e-86 UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/P... 322 3e-86 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 322 3e-86 UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/P... 322 3e-86 UniRef50_B1XWM7 Diguanylate cyclase/phosphodiesterase with PAS/P... 322 3e-86 UniRef50_B8GQW3 Signal transduction protein containing a membran... 322 3e-86 UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curviba... 322 4e-86 UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/P... 321 4e-86 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 321 5e-86 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 321 5e-86 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 321 5e-86 UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 321 6e-86 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 321 6e-86 UniRef50_Q1K1R0 Response regulator receiver modulated diguanylat... 321 6e-86 UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ra... 321 7e-86 UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation ki... 321 7e-86 UniRef50_B6A0H8 Diguanylate cyclase/phosphodiesterase with PAS/P... 321 7e-86 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 320 8e-86 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 320 8e-86 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 320 1e-85 UniRef50_A1AMG1 Response regulator receiver modulated diguanylat... 320 1e-85 UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Me... 320 1e-85 UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/P... 320 1e-85 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 320 1e-85 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 320 1e-85 UniRef50_Q39XT2 Diguanylate cyclase/phosphodiesterase with PAS/P... 320 1e-85 UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya... 320 2e-85 UniRef50_Q5ZVT3 Inner membrane protein PLUS sensory box protein ... 319 2e-85 UniRef50_C6MV72 Diguanylate cyclase/phosphodiesterase with PAS/P... 319 2e-85 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 319 2e-85 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 319 3e-85 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 318 3e-85 UniRef50_Q0BFB8 Response regulator receiver modulated diguanylat... 318 3e-85 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 318 3e-85 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 318 4e-85 UniRef50_A1TXD5 Diguanylate cyclase/phosphodiesterase with PAS/P... 318 4e-85 UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 318 4e-85 UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylo... 318 5e-85 UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Ba... 318 5e-85 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 318 5e-85 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 318 5e-85 UniRef50_C6X941 Response regulator receiver modulated diguanylat... 318 5e-85 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 317 7e-85 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 317 7e-85 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 317 7e-85 UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswalden... 317 7e-85 UniRef50_A6W3H5 Diguanylate cyclase/phosphodiesterase with PAS/P... 317 8e-85 UniRef50_A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/P... 317 8e-85 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 317 9e-85 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 317 9e-85 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 317 1e-84 UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ru... 317 1e-84 UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extra... 317 1e-84 UniRef50_C6WYR4 Response regulator receiver modulated diguanylat... 317 1e-84 UniRef50_C6ML43 Response regulator receiver modulated diguanylat... 317 1e-84 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 317 1e-84 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 316 1e-84 >UniRef50_P77334 Protein gmr n=91 Tax=Proteobacteria RepID=GMR_ECOLI Length = 661 Score = 1367 bits (3537), Expect = 0.0, Method: Compositional matrix adjust. Identities = 661/661 (100%), Positives = 661/661 (100%) Query: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI 60 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI Sbjct: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI 60 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA Sbjct: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG Sbjct: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD Sbjct: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 Query: 241 SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI Sbjct: 241 SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI Sbjct: 301 LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND Sbjct: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 Query: 421 QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV Sbjct: 421 QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 Query: 481 RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND Sbjct: 481 RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV Sbjct: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR Sbjct: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 Query: 661 A 661 A Sbjct: 661 A 661 >UniRef50_B4T6U5 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=44 Tax=Salmonella enterica RepID=B4T6U5_SALNS Length = 663 Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust. Identities = 521/657 (79%), Positives = 585/657 (89%), Gaps = 4/657 (0%) Query: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI 60 MK ++E T L N L SH WRL + +VL S T T+ ++T++LS EQA RIRE+T I Sbjct: 5 MKQIQEQTAL-NPLHSH---WRLADDRNVLYLSPTGETDTEKTVELSPEQAGRIREITAI 60 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 TSSL+++L +++ +VHLVGRKIN REWAG+ + W DTPAVA + LSFAEQ+VSEA Sbjct: 61 TSSLLITLLIEKQVTAVHLVGRKINNREWAGSLATWPDTPAVAPTQAQELSFAEQIVSEA 120 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 +S I ILDSRG I RFNRLCE+YTGLKE DVIGQSVFKLFMSRREA ASR FFR+ Sbjct: 121 NSVIAILDSRGKICRFNRLCEEYTGLKERDVIGQSVFKLFMSRREAVASRHYIENFFRNV 180 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 NAYE+E WI T KGQRLFLFRNKFVH+GSGKNEIFLIC+GTDITEERR QERLRILANTD Sbjct: 181 NAYEIERWIKTRKGQRLFLFRNKFVHNGSGKNEIFLICAGTDITEERRTQERLRILANTD 240 Query: 241 SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 ++TGLPNRNA+ + I+HAI A ++VG+VYLDLDNFKK+NDAYGH+FGDQLL+ VSLA+ Sbjct: 241 TVTGLPNRNAIHEFINHAIASAGESQVGIVYLDLDNFKKINDAYGHMFGDQLLQAVSLAL 300 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 LSCLE DQ+LAR GGDEF+VLA++TSQ+ALEA+ASRILTRLR PFRIGLIEVYT C++GI Sbjct: 301 LSCLEEDQLLARLGGDEFIVLAAHTSQAALEAVASRILTRLRQPFRIGLIEVYTGCAIGI 360 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 +L+P HG DS ++IR ADTAMY AKEGGRGQFCVF+PEMNQRVF+Y WLDTNLRKALEND Sbjct: 361 SLAPRHGQDSESLIRTADTAMYNAKEGGRGQFCVFSPEMNQRVFDYHWLDTNLRKALEND 420 Query: 421 QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 QL+IHYQPKITWRGEVRSLEALVRWQSPERGLIPPL+FISYAEESGLIVPLGRWVILDVV Sbjct: 421 QLLIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVV 480 Query: 481 RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 RQ+AKWRDKGINLRVAVN SARQLADQT+FTALKQ L +LNFEYCPIDVELTESCLIEND Sbjct: 481 RQIAKWRDKGINLRVAVNFSARQLADQTLFTALKQALYDLNFEYCPIDVELTESCLIEND 540 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 LALSVIQQFSQLGAQ+HLDDFGTGYSSLSQLARFPIDA+KLDQ FVRDIHKQP+SQSLV Sbjct: 541 TLALSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAVKLDQAFVRDIHKQPLSQSLV 600 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 RAIVAVAQALNLQVIAEGVE+AKEDAFLTKNG+NERQGFLFAKPMPAV+FERWYKRY Sbjct: 601 RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAVSFERWYKRY 657 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 213/554 (38%), Positives = 328/554 (59%), Gaps = 12/554 (2%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A QV IVI D + N+ + TG + ++IG+ + EAA Sbjct: 562 LRLARQVFDNTAEGIVITDPAFRVLEVNQAYQQITGYDKEEIIGKLPSVMQAGLHEAAYY 621 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRL--FLFRNKFVHS-GSGKNEIFLICSGTDITEE 226 + R G + E+W G+ +L ++ + GS +N + + TDIT+ Sbjct: 622 EGIWQTLRREGQ-WVGEIWNRRKSGESYPEWLSISQVADAKGSVQNYVAVF---TDITQR 677 Query: 227 RRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAY 284 + ++ERL+ LAN D++T LPNR +Q+ ID A+ A NK + V+++DLD FK +ND Sbjct: 678 KLSEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTL 737 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRL 343 GH GD LL++ + + CL +AR GGDEF+VL + + L +A +I+ L Sbjct: 738 GHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQ 797 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 PF + E++ S S+GI++ P+ G D+ ++++HAD AMY AKE G+ F + E N Sbjct: 798 PFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKESGKNTFRFYAAEANTNS 857 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYA 462 E L L+ NLR+A+E ++ V+HYQPK+ R + + EA+VRWQ PE G++ P+ FI A Sbjct: 858 VELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLA 917 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTIFTALKQVLQELN 521 EE+GLI+ +G W++ + RQ +W+ G N+RVAVN+SARQ D+T+ + L E Sbjct: 918 EETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESG 977 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 +++E+TES ++ N E A V+Q F LGA V +DDFGTGYSS L FPID++K Sbjct: 978 LTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLK 1037 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ FVRDI ++ +AI+A+A +L ++V+AEGVE+ ++ AFL K G ++ QGFLF Sbjct: 1038 IDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLF 1097 Query: 642 AKPMPAVAFERWYK 655 ++P+ + F R K Sbjct: 1098 SEPLHSHDFVRMLK 1111 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 198/517 (38%), Positives = 320/517 (61%), Gaps = 7/517 (1%) Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G E ++G+++ + M + A + ++ S +Y E PT +G+R + + Sbjct: 437 GQTEEKLLGKALLPVIMLPEQLATAAGMEQMIC-SDTSYYREYLSPTREGKRWIGWALRC 495 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA-- 262 + + SG+ E +I G DIT+ + A+ + LA D +TGLPNR + D + AIN A Sbjct: 496 IFNQSGQAEA-IIGMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAER 554 Query: 263 DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 D+ V +++LDLD FK +ND+ GH GDQLLR V +L C+ +AR GGDEF+VL Sbjct: 555 DSQGVAILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLI 614 Query: 323 SN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 S + A+ ++ +IL +L P++I EVYTS S+GI+L P G D+ ++++AD AM Sbjct: 615 SALDNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAM 674 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLE 440 Y AKE GR F+PE+N R E L L++ +R+ALE ++ + YQP++ R G + +E Sbjct: 675 YQAKEAGRNTCHFFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIE 734 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNI 499 AL+RW+ P+ G++PP +FI AEE+GLIVPLG WV+ + RQ +W+ +G LR+AVN+ Sbjct: 735 ALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNV 794 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 SARQ + + ++++L E + +++ELTES ++EN E A+ ++Q ++G + + Sbjct: 795 SARQFRQRNLGLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSI 854 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSLS L FPID +K+D+ FV+ + + ++ AI+A+A ++ L V+AEG+ Sbjct: 855 DDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGI 914 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 E +++ F+ + + QG+ ++P+ A F + KR Sbjct: 915 EHSEQMEFMHQRHCDTMQGYYLSRPVTAEEFGTFLKR 951 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 211/538 (39%), Positives = 327/538 (60%), Gaps = 11/538 (2%) Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 AI I D+ + N+ CE GL D+ G ++F + ++ VF SG Sbjct: 37 AIFIKDTESKLLAINKACELQWGLSFKDLQGTDASQIFPPAQMEHFLAKDQEVF-ESGCQ 95 Query: 183 YEVE--LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 + E +W K R+ K + SGK ++LI DITE RA++R+ +A D Sbjct: 96 IDFEETMWNSMLKQNRMVHTFKKPICDTSGK-PLYLIGMFVDITERHRAEQRILEMATYD 154 Query: 241 SITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSL 298 +TGLPNR ++D I+ A+ H + N+ V ++++DLDNFK +ND+ GH GD+LL+ V+ Sbjct: 155 ILTGLPNRALLKDRIERALEHGNRNRQRVALLFIDLDNFKVINDSLGHDVGDKLLQAVAA 214 Query: 299 AILSCLEHDQVLARPGGDEFLVLASNTSQSAL--EAMASRILTRLRLPFRIGLIEVYTSC 356 +S + + +AR GGDEF+VL SN +SA EA+A +IL L+L F I E++ S Sbjct: 215 RFVSIVRGEDTVARQGGDEFIVLLSNL-ESAFDAEAVAQKILNALQLHFLIDGKELHISG 273 Query: 357 SVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKA 416 S+GI+L P+ G D ++R++D AMY AK+ GR F PEMN++ E ++ LR A Sbjct: 274 SIGISLFPDDGEDIWTLLRNSDIAMYHAKKNGRNNCEFFKPEMNRQAKERHSMEVALRNA 333 Query: 417 LENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWV 475 L+ D+L++HYQP + G + E L+RWQ P GLI P+ FI AEE+G+I+P+G W+ Sbjct: 334 LKRDELLLHYQPIVNVNGGKADGFEVLLRWQHPGDGLIYPVKFIRLAEETGMIIPIGEWL 393 Query: 476 ILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTES 534 + Q+ W+++G + R+A+N+SA Q +T+ + ++L E + +E+TES Sbjct: 394 MRQSCLQIKAWQEQGYEVPRLAINLSAIQFRQKTLMENIVRILDETGVTGHYLTLEITES 453 Query: 535 CLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQP 594 LIE+ E + ++Q S+LG ++ +DDFGTGYS+LS L R+ I+ +K+D+ FVRDI P Sbjct: 454 ELIEDVEETIKTLRQLSELGIEISIDDFGTGYSNLSFLKRYQINTLKIDRSFVRDIPDDP 513 Query: 595 VSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 +++ AI+ +A AL LQVIAEGVE+ ++ A+L +G QGF F+KP+PA+ E+ Sbjct: 514 DDTAIIDAILVMAHALGLQVIAEGVENEQQLAYLALHGCTRFQGFYFSKPLPAIEIEK 571 >UniRef50_B8GMU1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMU1_THISH Length = 862 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 195/480 (40%), Positives = 294/480 (61%), Gaps = 7/480 (1%) Query: 180 GNAYEVELWIPTCKG-QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 G YE++ I G +R+ + V+ GK + L + DITE Q RLR LAN Sbjct: 382 GLPYEIDHRITCPDGSERILHEDGELVYDDEGK-PLLLRGTAQDITERHDYQNRLRHLAN 440 Query: 239 TDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDV 296 D +TGLPNR +D + HA+ +A N+ V +++LD+D FK VND+ GH+ GD+LLR Sbjct: 441 FDPVTGLPNRTLFKDRLQHALANATRNQRLVALLFLDMDQFKNVNDSLGHMMGDELLRQT 500 Query: 297 SLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM-ASRILTRLRLPFRIGLIEVYTS 355 + +L C+ +AR GGDEF++L N S ++ A R++ +R PFR+G E + + Sbjct: 501 AERLLGCVREGDTVARFGGDEFIILLENIEHSEQASLSAERVVQAMRRPFRLGEHEHFCN 560 Query: 356 CSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRK 415 S+GI+L PE ++RHAD+AMY AK G + +TP+MN R E L L L + Sbjct: 561 VSIGISLYPEDDEHPEDLVRHADSAMYLAKAQGGAGYRFYTPDMNTRAMERLLLQNQLHQ 620 Query: 416 ALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRW 474 ALE Q +HYQP++ R G + +EALVRWQ PERGL+PP +FI AE++GLI PLG W Sbjct: 621 ALELGQFQVHYQPQMDLRSGRICGVEALVRWQHPERGLVPPAEFIPMAEDTGLIEPLGEW 680 Query: 475 VILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTE 533 V+ R+V W+D+G+ L ++VN+S RQ + +++VL E E +++E+TE Sbjct: 681 VLRTAAREVRGWQDRGLPALNLSVNLSPRQFRHPDLPGMVERVLAESGLEAERLELEITE 740 Query: 534 SCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQ 593 +I + E + + + ++LG +V +DDFGTG+SSL+ L R P+ A+K+D+ FV I + Sbjct: 741 RLIIVDLEHTVDTLSRIARLGVRVSIDDFGTGHSSLAYLKRLPVHALKIDREFVDGIGQD 800 Query: 594 PVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 ++ A++A+ + L LQVIAEGVE+ ++ +FL ++G + QGF A+PMPA W Sbjct: 801 SDDAAIAEAVIALGRTLRLQVIAEGVETREQASFLREHGCDAVQGFFIARPMPAGELTGW 860 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 364 bits (934), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 206/557 (36%), Positives = 319/557 (57%), Gaps = 29/557 (5%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 +V + IV+L+ ++ N E TGL D+ G+ +LF A+ N+ Sbjct: 292 KVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPA-RLF-----ASGLHEND- 344 Query: 175 VFFRSGNAYEVE---LWIPTCKGQRLFLFRNKFVHSGS---------GKNEIFLICSGTD 222 F + A EV+ LW G+R R +SG + + TD Sbjct: 345 --FLATVAAEVDRAGLWRGEIWGER----REGPPYSGEMTVTAVRTRAGETTHYVAAITD 398 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKV 280 IT+ +R +E +R AN D +T LPNR+ + D ++ A++ A +V V++LDLD FK++ Sbjct: 399 ITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQI 458 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILT 339 ND+YGH GD++L+ + + +C+ + R GGDEF+V+ SN Q A +A +IL Sbjct: 459 NDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILY 518 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 L PF IG EV+ SVGI P+HG + ++R+AD AMY AK+GG ++ +FTP+M Sbjct: 519 SLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDM 578 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFI 459 +R L ++++LR AL D+ +H+QPK+ + EAL+RW+ PE+GLI P DFI Sbjct: 579 ARRSLALLTMESDLRHALARDEFELHFQPKVRADLTLIGAEALIRWRHPEKGLINPGDFI 638 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQ 518 AEESGLI+P+GRW + + +V WR +G+ + V+VN+S RQ DQT+ ++Q+L Sbjct: 639 PLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILV 698 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 E E +D+E+TE+ + + E A+ ++ LG + +DDFGTGYSSL+ L FPID Sbjct: 699 ETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPID 758 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+DQ FVRD+ ++V I+A+A+ L V+AEGVE ++ FL QG Sbjct: 759 TLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQG 818 Query: 639 FLFAKPMPAVAFERWYK 655 FL+++P+P F + + Sbjct: 819 FLYSRPLPPAEFTTFLR 835 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 203/559 (36%), Positives = 332/559 (59%), Gaps = 8/559 (1%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 R + L +V ++ AI+I D+ I NR E G +E DV+G ++ ++ Sbjct: 227 RQQENQLRLWAKVFEASNEAILITDANFRIISVNRAYETIMGYREQDVLGVDTLEV-GAK 285 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRL-FLFRNKFVHSGSGKNEIFLICSGTD 222 + + RN + ++ EL G+ F V + G+ E + I D Sbjct: 286 LQTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQVTNSRGEPEHY-IAIFND 344 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKV 280 ITE + ++ ++ LA+ D++TGLPNR + D ++ AI K+G++++DLD FK V Sbjct: 345 ITEHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILFIDLDRFKNV 404 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILT 339 ND+ GH GDQ+L++ + + + + ++R GGDEF+VL ++ L + ++ Sbjct: 405 NDSLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTEGNLADLTIKLRE 464 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 +L+LP+ + I ++ + S+GIA+ P+ G D +I++AD AMY AKE GR + +TP + Sbjct: 465 QLQLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKGRNNYQFYTPTL 524 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDF 458 N + + L L+++LR A++ +HYQP+I G++ LEAL+RW+ ERGLI P +F Sbjct: 525 NAKTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWRHRERGLISPAEF 584 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVL 517 I AEE+GLIV LG WV++ V+Q+A+WR +G N L V+VNISA Q +K +L Sbjct: 585 IPLAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFRQGDFLDRVKHIL 644 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 QE I++ELTE+ L+++ + A+ ++ +LG ++ +DDFGTG+SSL+ L PI Sbjct: 645 QEAQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTGFSSLNYLRHLPI 704 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 + +K+DQ FVR++ ++P S ++V +I+A+AQAL + IAEGVE+ E L G Q Sbjct: 705 NVLKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRAEFDVLQARGCRLMQ 764 Query: 638 GFLFAKPMPAVAFERWYKR 656 G+ FA+PMP V F++WY++ Sbjct: 765 GYFFARPMPPVIFDQWYQQ 783 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 220/608 (36%), Positives = 340/608 (55%), Gaps = 25/608 (4%) Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 L +L +L H + ++ E AG SA A RD L ++ + + + Sbjct: 355 LATALNCMADELQGHRLLQEERTAELAGANSALETEIAEHRDAEEALRQRQRAIDSSSNG 414 Query: 124 IVILDS---RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR--RNNRVFFR 178 I+I D+ I N E TG +V+G++ L RE R R Sbjct: 415 IMITDALELDHPIIYVNPAFERITGYAASEVLGRNPRLLCSGDREQLGLEVIRVALCELR 474 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHS------GSGKNEIFLICSGTDITEERRAQER 232 G+A EL G LF N S G N + ++ DITE +R +E+ Sbjct: 475 EGHA---ELRNYRKDGS---LFWNALSVSPVLNAAGEVTNYVGIV---NDITERKRYEEQ 525 Query: 233 LRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGD 290 L +N D +TGLPNRN + D I A+ +A+ + V ++DLD+FK +ND+ GH GD Sbjct: 526 LEYQSNHDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGD 585 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGL 349 +LL+ + + C+ +AR GGDEF+++ S+ + S A +A +I + P++IG Sbjct: 586 KLLQIAARRLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGE 645 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWL 409 E+ SCS GI+L P+ GSD+ ++++AD AMY AK+ GR F +T ++N V L + Sbjct: 646 HELVVSCSTGISLYPKDGSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTM 705 Query: 410 DTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 + LR+ALE D+ ++HYQPK+ G + +EALVRWQSPE G I P FI AEE+GLI Sbjct: 706 EKYLRRALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLI 765 Query: 469 VPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPI 527 V +G WV+ Q W+D G+ + VAVN+S RQ + + + ++ +E I Sbjct: 766 VAIGEWVLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYI 825 Query: 528 DVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFV 587 ++E+ ES L+++ + A++++ +LG Q+ +DDFGTGYSSLS L RFP D +K+DQ FV Sbjct: 826 ELEVVESLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFV 885 Query: 588 RDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 RDI + P S ++VR ++++A LNL+V+AEG+E+ + +L +E QGF F++P+PA Sbjct: 886 RDITRDPGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPA 945 Query: 648 VAFERWYK 655 FE+ + Sbjct: 946 AEFEQMLR 953 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 212/551 (38%), Positives = 322/551 (58%), Gaps = 18/551 (3%) Query: 110 LSFAEQVVSEAHSAIVIL---DSRGN-IQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 L ++ + E+ + IVI +R N + NR TG ++IG S + ++ Sbjct: 334 LQLYDRAIEESSNGIVICLADKTRDNPVIYANRAFSIMTGYSHDEIIGLSP-RFLLANDL 392 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF----VHSGSGKNEIFLICSGT 221 A R R G + L G LF N+ VH+ G+ F I Sbjct: 393 AQPGLERLRNCMRHGGSARAILRNYRKDGS---LFWNEVALAAVHNEHGEIAHF-ISVFN 448 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKK 279 D+T+ +R + L AN D +TGLPNRN ++D ++HAI A ++ K+ V+ LDLD FK+ Sbjct: 449 DVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATREHTKLAVLLLDLDQFKR 508 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRIL 338 VND GH GD L++ V+ + C+ +AR GGDEF++L+++ + A +A ++L Sbjct: 509 VNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILSTDIRDERAAATLAQKLL 568 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 + R I E+ S S+GIA+ P+ G + + R+ADTAMY AK+ GR F ++ E Sbjct: 569 RQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMYRAKDVGRNGFQFYSAE 628 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLD 457 MN R+ E L+L+ +LR A+ QL + YQPK+ G V+S EAL+RW+ P+ G+I P D Sbjct: 629 MNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEALIRWRHPQLGMISPGD 688 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIFTALKQV 516 FI AEE+GLI+P+G WVI + RQ+AKWRD+ ++RVA+NISA QL+ + + Q Sbjct: 689 FIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINISAYQLSHGKLTDQVIQA 748 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L L + + +E+TE+ ++ + A+ +Q ++G +V LDDFGTGYSSL+ L RFP Sbjct: 749 LDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALDDFGTGYSSLTYLKRFP 808 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 ID +K+D+ FV DI S ++V+ I+ +A LN+ V+AEGVE+ + FL NG +E Sbjct: 809 IDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVETEAQLEFLRTNGCDEV 868 Query: 637 QGFLFAKPMPA 647 QG+ F KP+P+ Sbjct: 869 QGYYFCKPLPS 879 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 208/573 (36%), Positives = 328/573 (57%), Gaps = 24/573 (4%) Query: 101 AVARDLSHG------LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 +ARD+S L A V + +AI++ D G I + N TG DV+ Q Sbjct: 837 GIARDISQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQ 896 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE- 213 +L + R+ A ++ + ++E E+ G+ +V + ++E Sbjct: 897 QP-RLLTADRQEANQLKHVLASLQHSGSWEGEILQKRKTGE----LYPSWVGITAVRDEE 951 Query: 214 ---IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVV 270 + +C +DI+E + ++ R+ LA D++T LPNR QD + A+ A+ N VV Sbjct: 952 GDLVSFVCFFSDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVV 1011 Query: 271 --YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL--ASNTS 326 +LDLD FK +ND+ GH GD++L++V+ + +C+ D +AR GGDEF +L + Sbjct: 1012 LMFLDLDRFKPINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDR 1071 Query: 327 QSALE---AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 + AL+ +A IL RL PF + E + + S+G+ALSP+ G++ + ++++ADTAMY Sbjct: 1072 EIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYH 1131 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEAL 442 AKE G+ F + EMN R E L L+++LR+ALE + V+HYQP+ T G + EAL Sbjct: 1132 AKEMGKNNFQFYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEAL 1191 Query: 443 VRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISA 501 +RWQ P RGL+PP +FI EE GL+ +G W++ + +Q+ W + + +V+VN+SA Sbjct: 1192 LRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSA 1251 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 RQ AD + + +L E +++ELTES L+ + A+ ++ +LG + +DD Sbjct: 1252 RQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDD 1311 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSL+ L +FPID +K+D+ FV + + RAI+A+A +LNL VIAEGVES Sbjct: 1312 FGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVES 1371 Query: 622 AKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 + FL ++G +E QG+LF +PMPA F Y Sbjct: 1372 QAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLY 1404 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 355 bits (910), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 193/505 (38%), Positives = 300/505 (59%), Gaps = 23/505 (4%) Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 + + + F RE RN R + G+ + EL+I + + G N Sbjct: 394 KKLVQAFKEEREGCFVLRNYR---KDGSPFWNELFIAPVRDR-----------DGVVTNY 439 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN---HADNNKVGVV 270 I ++ DITE RR +E+L A D +TGLPNRN +QD + A+ N + V+ Sbjct: 440 IGVM---NDITEHRRYEEQLVYQATHDPLTGLPNRNLLQDRLGQALALEAFRRRNPICVM 496 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA- 329 +LDLDNFKKVND GH GD LL+ V+ + +CL +AR GGDE++++ N + Sbjct: 497 FLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTVARLGGDEYIIVLPNVREVPD 556 Query: 330 LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 + +A +++ P + E+Y + S+GIAL P G A++++AD AMY AKE G+ Sbjct: 557 VITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGETVDALLKNADAAMYHAKEQGK 616 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSP 448 + ++ EMN RVFE L L+T+L +A++N + ++HYQP++ R G + +EALVRW P Sbjct: 617 NNYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQPRVDLRNGRICGVEALVRWNHP 676 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQ 507 E GL+ P FI AEE+GLIVP+G WV+ Q W+D G+ LR+AVN+SARQ + Sbjct: 677 EMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAGLPPLRMAVNLSARQFRQE 736 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 + ++++L E +++ELTES +++ E + +++++ + G +V +DDFGTGYS Sbjct: 737 NLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRELTDRGIEVAIDDFGTGYS 796 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SLS L RFPI +K+DQ F+RD+ + P +LV+ I+ +A L ++ IAEGVE A++ F Sbjct: 797 SLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHGLGMKTIAEGVELAEQIDF 856 Query: 628 LTKNGINERQGFLFAKPMPAVAFER 652 L ++ E QG+ F++P+ A R Sbjct: 857 LCRHQCEEMQGYYFSRPITAEELGR 881 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 355 bits (910), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 175/439 (39%), Positives = 275/439 (62%), Gaps = 5/439 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKK 279 DIT+ ++A++ ++ LA D++TGLPNR+ +QD + I A DN KV +++LDLD FK Sbjct: 467 DITDRKKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKS 526 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRIL 338 +ND GH+ GD LL V+ + C+ +AR GGDEF+++ S + L +A +IL Sbjct: 527 INDTLGHVAGDSLLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKIL 586 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 + P + E++ + S+GIA+ PE G+D ++++AD AMY AK+ G+ F F+ E Sbjct: 587 AAISKPLVLNDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSRE 646 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 MN + E+L L+ +LR+ALE ++ VI YQP++ + G + +EAL+RWQ P+ GL+PP Sbjct: 647 MNVQALEHLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSR 706 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQV 516 FI AEE+GLI+P+G W + + W D G + LRVAVN+ Q + ++ V Sbjct: 707 FIPMAEETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAV 766 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L++ +++ELTES L+ E + +V+ + ++G + +DDFGTGYSSLS L FP Sbjct: 767 LKKTGLAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFP 826 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 I+ +K+D+ F+RD+ P ++V AI+A+A LNL+V AEGVE+ + FL+ NE Sbjct: 827 INRVKIDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEI 886 Query: 637 QGFLFAKPMPAVAFERWYK 655 QG+L + P+P F R+ + Sbjct: 887 QGYLLSSPLPEAEFTRFLR 905 >UniRef50_Q2BNG9 PAS sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNG9_9GAMM Length = 948 Score = 354 bits (908), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 193/541 (35%), Positives = 315/541 (58%), Gaps = 14/541 (2%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 ++ A + I+ D G ++ NR + G+ E ++ F+ S +R Sbjct: 396 LLDTAEAIIITQDDNGRVETLNRFGQQVLGISE----SEAKMMGFLELNHETGSLPQHRQ 451 Query: 176 FF-----RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 R + ++E I + GQ L + V S G +I ++ G D+TE A+ Sbjct: 452 LLAHLIERKEHKVQMEASIRSSNGQMLQISWLHSVLSVPG-GDIRVLTIGLDLTERMHAE 510 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLF 288 +RL +AN D +T LPNR + +D AI N + +++ DLD+FK VND+ GH Sbjct: 511 KRLVWMANHDPLTALPNRLLFTEKVDEAIKRYQEKNGILAILFCDLDSFKDVNDSLGHPV 570 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRI 347 GD+LL+ + I + + +D VLAR GGDEF VL + +E +A I+ R F I Sbjct: 571 GDELLQQAAERIQNIICNDGVLARLGGDEFTVLLEGRANIREIENVAQHIIRAFRQSFFI 630 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 E++++ S+GI+L P+HG + T++I+HAD AM+ AKE G+ Q + E + +E Sbjct: 631 DGYEIFSTISIGISLHPDHGDNVTSLIQHADVAMFDAKESGKNQLRFYHDEQGSQRYERF 690 Query: 408 WLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 L +LR+ALE D+ I YQP+I R G V +EAL+RWQ E G+I P FI AEE G Sbjct: 691 SLVNDLRRALEKDEFRIFYQPQIDTRTGNVMGVEALLRWQHSEAGMISPAKFIPLAEEQG 750 Query: 467 LIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCP 526 LIVP+G WV+ + R W D+G++ R+ VNI+ +Q+ +++ ++ L E Sbjct: 751 LIVPIGEWVLRESCRMGKIWHDQGMDFRIGVNIAGQQIMHESLMGTVQTALDESGIRPHL 810 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 +D+E+TE+ L++ E+ + + +F ++G + +DDFGTG+SSLS L + PI+ +K+DQ F Sbjct: 811 LDLEVTENFLLKQPEITIPKLHKFREMGLSLSMDDFGTGFSSLSYLKKLPINTLKIDQSF 870 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 VRDI P +++V+AI+ +A++L L+ +AEGVE++++ ++L +G + QG+ F++P+P Sbjct: 871 VRDIGSDPEGEAIVKAIIVLAKSLGLEALAEGVETSEQLSYLRTHGCHLIQGYYFSRPLP 930 Query: 647 A 647 A Sbjct: 931 A 931 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 353 bits (907), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 203/550 (36%), Positives = 313/550 (56%), Gaps = 5/550 (0%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 + A V E+ AIVI DS I R N TG + +V+GQS +L S R + Sbjct: 495 MEMAASVFKESAEAIVICDSEDKILRVNPAFYKITGYSQIEVVGQSP-QLLQSDRPIQSM 553 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 N + + ++ E+ G+ ++ + +I +DITE + Sbjct: 554 LHNREAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYIFSDITERKLF 613 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHL 287 +E + LA+ DS+T LPNR A Q ++ A+ A +K + V+++DLD+FK +ND GH Sbjct: 614 EEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHFKMINDTSGHP 673 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFR 346 GD LL+ V+ L + V++R GGDEF VL SNT + +A +A ++L PF+ Sbjct: 674 VGDLLLQQVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDNATTVVARKLLACFYEPFK 733 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 + EV S S+GI + P++G +++ +AD+AMY AKE GR F +T EMNQ E Sbjct: 734 LPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRNCFQFYTKEMNQYAQER 793 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 L L+ +LRKALE D+ V+HYQP+ G + EAL+RWQ P++GL+ P +FI+ AE +G Sbjct: 794 LELELDLRKALERDEFVLHYQPQFDPNGRIIGCEALIRWQHPDKGLLSPGEFINMAEITG 853 Query: 467 LIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 LIVP+G+WVI Q W +G L ++VN+S RQ + +K + Sbjct: 854 LIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKNAITTSGITPS 913 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 +++ELTES ++ N E + + S LG + +DDFGTGYSS+S L RFP++ +K+DQ Sbjct: 914 CLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRFPVNKLKIDQS 973 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 FVR + + ++V++I+ +A ALNL VIAEGVE+ ++ FL + E QG+ F++P+ Sbjct: 974 FVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEEFQGYYFSRPI 1033 Query: 646 PAVAFERWYK 655 A E++ + Sbjct: 1034 LAADIEQYLQ 1043 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 188/531 (35%), Positives = 310/531 (58%), Gaps = 21/531 (3%) Query: 125 VILDSRGNIQRFNRLCE----DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 ++ D RGNI LCE + GL ++ ++ +++F R F Sbjct: 279 IVTDQRGNITY--TLCEGKIAEELGLTSERMLRKTSYEIFPYEVAEQMESYFRRAFAGES 336 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 +E++L G ++ + +G + ++ S DITE ++A+E +R +A+ D Sbjct: 337 VTFELKL-----SGNDYYITLSPIEENGEI---VEMVGSMIDITERKKAEETIRYMAHYD 388 Query: 241 SITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSL 298 S+T LPNR + + A+ A + K+GV+++DLD FK +ND GH GD LL+ V+ Sbjct: 389 SLTNLPNRTLFHEKLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVAN 448 Query: 299 AILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSV 358 ++ CL + ++R GGDEF + + + +A RI+T + + IE++ + S+ Sbjct: 449 RLICCLRKEDSVSRLGGDEFAIFLTGVTHREAGEIAQRIITSMSESITLDHIEIFITPSI 508 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 GI++ P+ G D A+++HAD AMY AKE G+ + F+ E++Q + + L L+ LRKAL+ Sbjct: 509 GISMYPDDGDDIEALLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALD 568 Query: 419 NDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 Q +HYQPKI + G++ +EAL+RW P+ GLIPP+ FI AEE+GLIVPLG WV+ Sbjct: 569 EKQFTLHYQPKIHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMR 628 Query: 478 DVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 +Q W++ G L VAVNIS RQ + + +L+E +++E+TES Sbjct: 629 TACQQTKAWQEAGFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMA 688 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 + N + + ++ + LG + +DDFGTGYSSLS L++FPID +K+DQ F+R+++ P + Sbjct: 689 L-NVDYTIRILNRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNLN--PQN 745 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 Q++++ I+ +A + + VIAEGVE+ + FL + NE QG+ ++KP+P Sbjct: 746 QAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPT 796 >UniRef50_Q2Y6N3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6N3_NITMU Length = 1025 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 174/427 (40%), Positives = 273/427 (63%), Gaps = 5/427 (1%) Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVND 282 + + +ERL LA D +T LPNR+ D + A+ HA N+ VGVV+ DLD FK VND Sbjct: 575 DRKTTEERLTYLAQFDPLTELPNRSLFLDRLRQAMEHAHRNRRRVGVVFADLDRFKIVND 634 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM-ASRILTRL 341 GH GD+LL V+ + C+ +AR GGDEF ++ S+ Q + A ++++ L Sbjct: 635 TMGHSTGDELLIHVAKRLQQCVRSCDTVARLGGDEFALILSDLVQPEDATLIAEKVISAL 694 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 ++PF + E+Y S S+GI++ P G+D+ +++R+ADTAM+ AKE G + + P+MN+ Sbjct: 695 QVPFELETQEIYVSASLGISIYPGDGTDADSLLRNADTAMFQAKEQGPAIYQFYLPQMNE 754 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFIS 460 R L ++T LR AL + V+HYQPK + GE+ EAL+RWQ P GL+PPL FIS Sbjct: 755 RAVARLKIETQLRGALARREFVLHYQPKASLINGEITGFEALLRWQHPAHGLVPPLQFIS 814 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQE 519 E++GLIV +G WV+ V Q+ +W+ +G+ L +A+N+SARQ Q + + + + L+ Sbjct: 815 VLEDTGLIVAVGEWVVKTVCEQIREWQGQGLVLHPIAINLSARQFQQQDLDSIIGETLRA 874 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 N + ++ ELTES L++ E+A + +Q G Q+ +DDFGTGYSSL+ L RFP+D Sbjct: 875 TNIDPRLLEFELTESVLMKEAEMAANALQNLKAFGVQISMDDFGTGYSSLAYLKRFPLDV 934 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ F+RD+ P ++ A++ +A +L L+V+AEGVE+ + FL ++G +E QG+ Sbjct: 935 LKIDRAFIRDVTTDPDDATITVAMIKLAHSLGLKVVAEGVETRAQLEFLIRHGCDEMQGY 994 Query: 640 LFAKPMP 646 F++P+P Sbjct: 995 YFSQPLP 1001 >UniRef50_B8GNC0 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GNC0_THISH Length = 655 Score = 351 bits (901), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 204/549 (37%), Positives = 310/549 (56%), Gaps = 8/549 (1%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 F++ ++ + + V +D+R ++ N +V + L + E A Sbjct: 95 FSQSIIQASPAFFVAIDTRHRVRMMNPAMLRALDRSAREVRDRPFADLCVPADEQEALHA 154 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFL-FRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 + R+G+ + E + G+RL + + V +G G+ E F G DITE RR Q Sbjct: 155 VFQHMLRTGHPIQHESHVVARDGERLLVEWHGNTVRNGQGQVEYFFAL-GLDITERRRTQ 213 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLF 288 +L +A+ D +TGLPNR +Q+ I HA++ A + +V +++LDLD FK VND+ GH + Sbjct: 214 AQLEHIAHYDLLTGLPNRTLLQNRISHALDVARRRDRQVAILFLDLDRFKVVNDSLGHAY 273 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRI 347 GD+LLR VS + L + LAR GGDEF+VL L +A IL L P+R+ Sbjct: 274 GDELLRQVSDRLRRRLREEDTLARWGGDEFIVLVDEVDDPQGLSLLAEGILAELAEPYRL 333 Query: 348 G-LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 EV+ S+GI+L P+ G + +I ADTAMY AK+ GR + +T + + Sbjct: 334 SNGQEVFVGGSIGISLYPQDGRSAEQLIMKADTAMYQAKDQGRSNYQFYTSALTLAANDR 393 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWRGEVR-SLEALVRWQSPERGLIPPLDFISYAEES 465 L L+T+LR ALE ++ +HYQP++ + +V +EALVRW P++GL P FI AEE+ Sbjct: 394 LALETSLRHALEREEFTLHYQPRVRTQDDVMIGMEALVRWHHPDKGLTAPDAFIPMAEET 453 Query: 466 GLIVPLGRWVILDVVRQVAKW-RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEY 524 GLI PLG WV+ RQ W R G + +AVN+S RQL + + + +L++ Sbjct: 454 GLITPLGLWVLRTACRQAQTWMRLYGEPIHMAVNLSMRQLRQPDLVSQIDAILRDTGLPA 513 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 +++ELTES L+ D L+ + + LG ++ +DDFGTGYSSL+ L R PIDA+K+D+ Sbjct: 514 SSLELELTESVLMAGDGHTLTALAELKALGVRLAIDDFGTGYSSLAYLKRLPIDALKIDR 573 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 FV DI ++ I+A+A+ L L+V+AEGVE+ ++ AFL K G + QGF F+ P Sbjct: 574 SFVSDIPHDASDMAIASTIIAMARTLGLEVVAEGVETPEQLAFLKKEGCDSYQGFGFSPP 633 Query: 645 MPAVAFERW 653 + A A W Sbjct: 634 VDAQAMTLW 642 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 351 bits (901), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 204/553 (36%), Positives = 324/553 (58%), Gaps = 18/553 (3%) Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 GL +V AI++ D +G I N + TG + +G + + F S R A Sbjct: 185 GLRLIHKVFENTSEAIILTDPQGMILDINPAFTEITGFSREEALGHNP-RSFKSDRHDAT 243 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQ----RLFL--FRNKFVHSGSGKNEIFLICSGTD 222 N ++ E+W G+ RL + RN+ +G +N I + +D Sbjct: 244 FYTNMWRKIAEEGFWQGEIWDRRKNGEIYPKRLTINAVRNQ---AGEVENYIGIF---SD 297 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKV 280 I+E + + +L LA D++T LPNR D ++H +A ++ V V ++DLD FK+V Sbjct: 298 ISESKATELKLERLAYYDALTQLPNRMLFHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQV 357 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMASRILT 339 ND GH GD+LL+ V+ + C+ +AR GGDEF ++LA + ++ +A ++L Sbjct: 358 NDTLGHSAGDELLQHVAQRLEGCVRAADTVARMGGDEFTVILADISDNESVARVARKVLE 417 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 L+ I +++ S+GIAL P++G+D + ++AD AMY AKE GRG + F+ EM Sbjct: 418 ELQKSISIKGHDIFVGASIGIALYPDNGNDVETLTKNADMAMYRAKESGRGNYKFFSEEM 477 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDF 458 N + L L++ L A+ + L ++YQPK+ + G + +EALVRW + +IPP+ F Sbjct: 478 NVSTSQRLSLESQLHHAVNANLLEVYYQPKLNMQSGIMVGMEALVRWPQADGSMIPPIQF 537 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKW-RDKGINLRVAVNISARQLADQTIFTALKQVL 517 I AEE+GLIVPLGR V+ + A+W R+ G+NLRVAVN+SAR+ + ++Q L Sbjct: 538 IPVAEETGLIVPLGRLVMRQAMLDCARWVRETGMNLRVAVNLSAREFQSPGLVVEIEQTL 597 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 E + +VE+TES ++ + E A++ ++Q S+LG + +DDFGTGYSSLS L +FPI Sbjct: 598 AECGLDARHFEVEITESLMMHDVENAIATLEQISRLGIHIAMDDFGTGYSSLSYLKKFPI 657 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 ++K+D+ FV+DI P +V AI+++A+ LNL+V+AEGVE+ ++ +FL +N +E Q Sbjct: 658 HSLKVDRSFVKDIPDDPNDIEIVAAILSLAKVLNLKVVAEGVETQEQLSFLRQNLCDECQ 717 Query: 638 GFLFAKPMPAVAF 650 G+ F+KP+ AV F Sbjct: 718 GYSFSKPLSAVDF 730 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 350 bits (899), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 201/579 (34%), Positives = 324/579 (55%), Gaps = 41/579 (7%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGN---IQRFNRLCEDYTGLKEHDVIGQSVF 157 A + H L E+ + + +AI+I + ++ N TG + +G+++ Sbjct: 381 AARKHAEHELQLRERAIEASANAIIIARAVAPDYPLEYVNPAFTRITGYSPEEALGRNIG 440 Query: 158 KLF----------------MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 L+ + +RE A RN R + G + +L+I K Sbjct: 441 FLWGKDWEQPGIEELRSIALEKREGHAVLRNYR---KDGALFWSDLYIAPVK-------- 489 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH 261 +G+ F++ DIT +R + L N D++TGL NR+ ++D + AI++ Sbjct: 490 -----DDTGEVSHFVVAL-YDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAISY 543 Query: 262 AD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF- 318 A N+ + + ++DLD FK VND GH GD LL+ ++ + + ++R GGDEF Sbjct: 544 AHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDEFV 603 Query: 319 LVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHAD 378 L+L + RI+ + P I E + S S+G+A+ P G +I+HAD Sbjct: 604 LILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKHAD 663 Query: 379 TAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVR 437 AMY AKE GR F +T MN+R E L L+ +LR A+E + ++HYQP++ R G++ Sbjct: 664 IAMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGKIV 723 Query: 438 SLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVA 496 +EAL+RWQ PE G+IPP+ FI AEE+GLIVP+G WVI + RQ W++ G+ +LR++ Sbjct: 724 GVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLRMS 783 Query: 497 VNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQ 556 VN+SARQ A Q + ++ L+E +++ELTES ++ + + A+ ++++ LG Q Sbjct: 784 VNLSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALGVQ 843 Query: 557 VHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIA 616 + +DDFGTGYSSLS L RFPID +K+D+ FV DI P ++V +I+++A +L L VIA Sbjct: 844 LSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTVIA 903 Query: 617 EGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 EGVE+ ++ A+L ++ ++ QG+ F++P+ A A E K Sbjct: 904 EGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLK 942 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 206/562 (36%), Positives = 315/562 (56%), Gaps = 17/562 (3%) Query: 103 ARDLS------HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 ARD+S L Q V ++ + +VI ++ G IQ N TG +VIG+ Sbjct: 352 ARDISKRKQSEEKLRHLSQAVEQSPADVVITNAEGIIQYVNPRFSQVTGYASKEVIGKKP 411 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 + S R AA + +G + EL G LF + S N + Sbjct: 412 -SILKSGRTPAALYDSLWETISAGKEWRGELMNRKKDGS---LFWQHAIISPIRDNSGVI 467 Query: 217 ---ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVY 271 I DI+ + +ERL AN D++TGLPNR D + AI A N KV ++ Sbjct: 468 THYISVKEDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYNRKVALML 527 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSAL 330 LDLD+FKKVND GH GD LL++ +L ++ CL +AR GGDEF++L + T S+ Sbjct: 528 LDLDDFKKVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPDLTDTSSA 587 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 E +A +IL PF +G E Y + S+GIA+ P+ D ++R+AD AMY +K G+G Sbjct: 588 EVVAEKILAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYRSKREGKG 647 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPE 449 F FTPEMN R E++ +++ LR A+E +++ +HYQP + + G + EAL+RW +P Sbjct: 648 VFRYFTPEMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEALLRWSNPV 707 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTI 509 G + P FI AEE+GLI+ +G WV+ R A W+ + VAVNIS +Q +T+ Sbjct: 708 LGEVSPEQFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIFVAVNISGKQFQKRTL 767 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 ++ L E +++ELTES L+E+ + LS+IQ+ LG +DDFGTG+SS+ Sbjct: 768 VEIVRSSLNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDFGTGFSSI 827 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L RFP D +K+D+ F++D+ LV++I+A+A +++L+V+ EGVE+ + FL Sbjct: 828 SYLRRFPFDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVETHGQREFLR 887 Query: 630 KNGINERQGFLFAKPMPAVAFE 651 +G + QG+L+++P+P F+ Sbjct: 888 LSGCHIAQGWLYSRPIPGKDFQ 909 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 206/560 (36%), Positives = 317/560 (56%), Gaps = 14/560 (2%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 ++ GL + +V AI+I D+ NI N+ TG +V+GQ KL S Sbjct: 378 KEAEQGLRLSAKVFESNTEAIMITDAEQNIVMVNQAFTQITGYGADEVLGQRP-KLLSSG 436 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT-- 221 R R+ + + E+W G+ +F ++V + ++E I Sbjct: 437 RHGPEFYEAFWHALRANDLWRGEIWNKRKNGE---IF-PEWVTISALRDETSQISHYVAV 492 Query: 222 --DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNF 277 DITE ++ +ER+ LAN D +TGLPNR + D I+ A + A N KV V+++DLD F Sbjct: 493 FLDITERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYF 552 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASR 336 K +ND+ GH GD LL+ V+ + +CL +AR GGDEF+ L S S + +A + Sbjct: 553 KNINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEK 612 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 ++ L F +G ++ + S+GI + P+ G S ++R+AD AMY AK+ GR F ++ Sbjct: 613 MIESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYS 672 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPP 455 P+MN++ E L L+T LR A+ QL ++YQPK++ G++ +EAL+RWQ PE G I P Sbjct: 673 PDMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISP 732 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALK 514 FI AEE+GLI +G WV+ Q W+ +G ++ +AVN+SARQL + Sbjct: 733 AVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVV 792 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 +L+E + + +E+TES L+ E L +++Q G ++ LDDFGTGYSSLS+L Sbjct: 793 TILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKN 852 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 P+D++K+DQ FVRDI P S+V A +A ALNL+V AEGVE+ ++ F+ Sbjct: 853 LPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCE 912 Query: 635 ERQGFLFAKPMPAVAFERWY 654 E QG+LF++P+PA +++ Sbjct: 913 EYQGYLFSRPIPASEVVKYF 932 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 200/549 (36%), Positives = 308/549 (56%), Gaps = 6/549 (1%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 ++ L + V + AI+I D+R NI R N TG +H+V+G++ +L S Sbjct: 276 KNFEDNLRLSATVFEGSTEAIIITDARANILRVNSAFTAMTGYADHEVVGKNP-RLLKSG 334 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 R S ++ E+W G + S + DI Sbjct: 335 NHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVRNSEDKITNYVGISRDI 394 Query: 224 TEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVN 281 T + A+ERL A+ D++TGLPNR D + HA+ A D ++ +++LDLD FK +N Sbjct: 395 TLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILFLDLDRFKVIN 454 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASR-ILTR 340 D GH GD LL+ V+ +L LAR GGDEF++L + + A+A+R IL Sbjct: 455 DTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAEDAAVAARRILDV 514 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 L PF + EV+ S S+GI++ P G D A++R AD AMY AK+ G+ + + M+ Sbjct: 515 LAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKNDYQFYESTMS 574 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFI 459 E L L+ +LR AL+ ++ V+HYQP++ G + EAL+RW P+RGL+ PLDFI Sbjct: 575 TGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLPDRGLLWPLDFI 634 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQ 518 AEESG I+P+G WV+ Q KW+D G+ + RV+VN+S Q + + + ++L+ Sbjct: 635 PLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKDNLTSTVDRILK 694 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 E +++E+TES ++EN E A++ +Q ++LG V +DDFGTGYSSL L RFPI Sbjct: 695 ETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYSSLGYLKRFPIG 754 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 A+K+DQ FVR I ++ +I+++ + LNL+V+AEGVE+ ++ L +E QG Sbjct: 755 ALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTVLRNYQCDEAQG 814 Query: 639 FLFAKPMPA 647 +LF++P+ A Sbjct: 815 YLFSQPVDA 823 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 348 bits (893), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 197/558 (35%), Positives = 322/558 (57%), Gaps = 17/558 (3%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 ++ ++ + + I + D GN+ + + + E +G++VF +F R+ A S Sbjct: 196 TYLNAILHYSPALISVKDLDGNVVLASDHFKHMADIDESGFVGKNVFDVF--PRDIAQSM 253 Query: 171 RNNRVFFRSGN-AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS-GTDITEERR 228 + + ++ YEVEL + G KF G + ++F +C+ GTDI+E + Sbjct: 254 WDIDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGK-EGKVFGVCTIGTDISERKL 312 Query: 229 A-------QERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKK 279 A Q RL +A D++T LPNR+ D I H + A N++V ++ LD+D FK Sbjct: 313 AENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARARRSNSRVALMLLDIDRFKI 372 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRIL 338 VND+ GH GD LL+ +++ + + +AR GGDEF+V+ + +A+++L Sbjct: 373 VNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVVLEGIHDVDDVIFVANKLL 432 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L P I + + S+G+++ PE G+D+ ++++AD AMY AKE G+ +T Sbjct: 433 ATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIAMYKAKEAGKNNCQFYTKG 492 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 MN YL L+ +LR+A+E +QL ++YQP+I + G++ +EALVRWQ PERGL+ P Sbjct: 493 MNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGVEALVRWQHPERGLVSPAH 552 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQV 516 FI AEE+GLIVP+G WV+ + +Q W D G N+ +VAVN+S RQ + ++ + Sbjct: 553 FIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVNLSPRQFRQKNFPGKVEAI 612 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 LQE E +++E+TESC +E+ ++ + Q +Q+G + +DDFGTGYSSL+ L RFP Sbjct: 613 LQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLAIDDFGTGYSSLAYLQRFP 672 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 I +K+D+ F+ DIH ++ + I+ +A + L+V+AEGVE+ + +L G ++ Sbjct: 673 IQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEGVETESQAEWLRAKGCDQV 732 Query: 637 QGFLFAKPMPAVAFERWY 654 QGFL+AKPM A E + Sbjct: 733 QGFLYAKPMTAKQLESHF 750 >UniRef50_C0ZBG1 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBG1_BREBN Length = 805 Score = 348 bits (893), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 186/478 (38%), Positives = 299/478 (62%), Gaps = 10/478 (2%) Query: 180 GNAYEVELWIPTCKGQRLFL-FRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 G+A ++ + T +G +L L + V +F+I DIT ++ + ++ LA Sbjct: 322 GDARNCDITLTTREGCQLHLNMTHTPVFVDQQITGVFMIVR--DITNKKEYEAKINYLAF 379 Query: 239 TDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDV 296 DS+TGLPNR ++ +D I A + +V V++LDLD+FK VND+ GH FGD LL++ Sbjct: 380 HDSLTGLPNRRFVEQQLDQVIMEAQKTDQQVYVLFLDLDHFKLVNDSLGHDFGDLLLQEA 439 Query: 297 SLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSC 356 SL + C+ + R GGDEF+V+ ++ ++ + +MA+ I + F I E+Y + Sbjct: 440 SLRLRECVGKKGTVYRLGGDEFMVILTDVTEREVSSMANEINETIEQAFFIHGHELYITT 499 Query: 357 SVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKA 416 S+GI+ PE G D + ++R+AD AMY AK+ G+ F ++ P + Q V + + + L +A Sbjct: 500 SIGISRYPEDGQDRSVLMRNADAAMYAAKDKGKNSFHLYVPNLEQAVNDKMNIQNELNRA 559 Query: 417 LENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWV 475 L + ++HYQP+++ + G + +EAL+RW PERGL+ P FIS AEE+GLIVP+G WV Sbjct: 560 LARQEFLLHYQPQVSAKSGAIVGVEALIRWDHPERGLLLPDQFISVAEETGLIVPIGEWV 619 Query: 476 ILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTES 534 + +Q +W+D+G+ LRVAVN+SARQ Q + ++L + +++E+TES Sbjct: 620 LRTACKQNKQWQDQGLKPLRVAVNLSARQFLKQDFTQMIAEILHQTRLAPEYLELEITES 679 Query: 535 CLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQP 594 +I+ A +++ QLG V +DDFGTGYSSL L FP++ +K+D+ FVRD+ +QP Sbjct: 680 SMIDVHR-ATQALKELKQLGVHVAIDDFGTGYSSLYYLKEFPLNRLKIDRSFVRDMIEQP 738 Query: 595 VSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA--VAF 650 +Q++V I+++A L + VIAEGVE+ +E AFL ++ E QG+LF++P+P+ VAF Sbjct: 739 SNQAIVSTIISMAHHLQMHVIAEGVETKEELAFLQEHLCEEVQGYLFSRPLPSEDVAF 796 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 348 bits (892), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 191/507 (37%), Positives = 291/507 (57%), Gaps = 36/507 (7%) Query: 157 FKLFMSRR------EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 FK M++ E+ RRN V + S NA + V++ G Sbjct: 210 FKRLMAKHGVVTNFESRVHRRNGEVIWISENA--------------------RSVYNSDG 249 Query: 211 KNEIFLICSGT--DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNK 266 L GT ITE + + ++ A D++TGLPNR + D + A+ H++ Sbjct: 250 T---LLFFEGTVEAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKL 306 Query: 267 VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNT 325 + +LDLD FK +ND+ GH GD+LL+ + + SCL +AR GGDEF L+L Sbjct: 307 TAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQP 366 Query: 326 SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAK 385 ++ A+ R+L + P++ +E +CS+G+ L P+ G D+ ++++AD+AMY AK Sbjct: 367 NEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAK 426 Query: 386 EGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVR 444 E GR F F+ EMN V + L L LR+A+ N+ V+HYQPK++ ++ EALVR Sbjct: 427 ELGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVR 486 Query: 445 WQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQ 503 W S G++ P FI AEE+GLI+PLG WV+ RQ W+D G + ++VN+S RQ Sbjct: 487 WNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQ 546 Query: 504 LADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFG 563 LA I ++++L E E +++E+TES + + E + +++ Q LG ++ LDDFG Sbjct: 547 LARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFG 606 Query: 564 TGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAK 623 TGYSSLS L RFP+D +K+DQ FVRDI S ++V+AI+++ + LNL V+AEG+E+ Sbjct: 607 TGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETED 666 Query: 624 EDAFLTKNGINERQGFLFAKPMPAVAF 650 + FL NG +E QG+L +KP+P F Sbjct: 667 QFQFLLANGCDEGQGYLMSKPVPNKNF 693 >UniRef50_C4KA21 Diguanylate cyclase/phosphodiesterase with Chase sensor n=1 Tax=Thauera sp. MZ1T RepID=C4KA21_THASP Length = 1093 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 191/465 (41%), Positives = 275/465 (59%), Gaps = 7/465 (1%) Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLI 255 R FR + H G I + D+T R A+ R+R LA D +TGL NR+A QD Sbjct: 624 RTLQFRIEGEHVGGRLRRIR--GTAQDVTALREAEARIRYLARFDPLTGLLNRSAWQDHA 681 Query: 256 DHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 + HA +++ V++LDLD+FK VND+ GH GD+LL V+ + C+ + ++AR Sbjct: 682 QDVLRHAARHDDRCAVLFLDLDDFKTVNDSLGHAAGDRLLAQVACRLGGCVRAEDLVARI 741 Query: 314 GGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTA 372 GGDEF++L S + + A +A R+L L P +I + S+GIAL P G + Sbjct: 742 GGDEFVILLSRLAHAEEPARVAERVLDALARPLQIDSQPLRVGASIGIALYPADGGEIDT 801 Query: 373 IIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-T 431 +++HADTAMY AKE GR + F PEM QRV L + LRKA+E+ L +HYQP+I Sbjct: 802 LLKHADTAMYEAKESGRNAYRFFLPEMTQRVTRRLQTEAELRKAIESGDLRLHYQPQIDA 861 Query: 432 WRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI 491 G V EALVRWQ PERGL+PP F+ +AE+SGLIVPLG WV+ + Q +WRD G+ Sbjct: 862 ASGRVYGCEALVRWQHPERGLLPPDRFVPFAEQSGLIVPLGEWVLREACLQQVRWRDAGL 921 Query: 492 N-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQF 550 L VAVNISA Q + + +VL E + I++E+TES L++ ++ Q Sbjct: 922 PPLDVAVNISALQFRRRDFVATVARVLGETGADPARIELEITESALMDATPELVASFDQL 981 Query: 551 SQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQAL 610 LG + LDDFGTGYSSLS L R P+ +K+D+ FV + P ++ A +++A+ L Sbjct: 982 VALGLTLALDDFGTGYSSLSYLKRLPLRRLKIDRSFVDGLPDNPEDAAITSATLSLARDL 1041 Query: 611 NLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 ++V+AEGVE+ + +L K G QG+LF++P+ F W++ Sbjct: 1042 GMEVVAEGVETEDQRGYLCKRGCRAMQGYLFSRPLGVEEFGTWFE 1086 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 194/559 (34%), Positives = 314/559 (56%), Gaps = 10/559 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A S + I+I D R I NR + +G ++IG++ L R E ++ Sbjct: 323 LRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIGKNPSIL---RSEHHSN 379 Query: 170 RRNNRVF--FRSGNAYEVELWIPTCKGQRLFLFRN-KFVHSGSGKNEIFLICSGTDITEE 226 ++ ++ E+W G+ + + N VH + + DI+ Sbjct: 380 EFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINAVHDPNTDALTHFVSVIADISNI 439 Query: 227 RRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD-NNKVGVVYLDLDNFKKVNDAYG 285 + ++E+L LA+ D++T LPNR +DHA+ H + + K+ + +LDLD FK +ND+ G Sbjct: 440 KASEEKLSHLAHHDALTNLPNRLLFSARLDHALTHREASEKIVMFHLDLDRFKHINDSLG 499 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLP 344 H +GDQLL V+ + L LAR GGDEF +L S E++A R++ + P Sbjct: 500 HKYGDQLLLQVTERLKGVLSDKDTLARVGGDEFAILVEELEHVSDAESIADRLVEAMEQP 559 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 F + + +T+ S+G+AL+P+HG D + +HAD A+ AK+ GR F F PE+++ V Sbjct: 560 FTLDGKDYFTTASIGLALAPDHGDDIDTLTKHADIALNQAKDSGRNNFAFFQPELSETVQ 619 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAE 463 E++ L+ LRKAL +Q +HYQP++ G + EAL+RW PE G+IPP F+ AE Sbjct: 620 EWIKLEPELRKALAENQFQLHYQPQVDSTGTAIVGAEALIRWHHPEMGIIPPNQFLPIAE 679 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQVLQELNF 522 E GL+ +G WV+ + Q++ WR +G I R+A+N++ Q+ Q + + Q L+ Sbjct: 680 EIGLMNKIGEWVMNTALEQLSFWRSRGLIGFRLAINLAGDQITKQNLPMVVMQALEHFQI 739 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +++E+ E+ L+E++E A S +Q +LG + LDDFGTGYS+LS L + PI +K+ Sbjct: 740 PAEMLELEILETFLMEHEEEATSTFKQLRELGVHLSLDDFGTGYSALSYLKKLPITKVKI 799 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 DQ VRDI + P +++ +A++ +A L+L V AEGVE+ + FL ++ QG+LF+ Sbjct: 800 DQSLVRDIPEDPNDEAIAKAVILLAHTLDLTVCAEGVETRAQREFLESENCDQLQGYLFS 859 Query: 643 KPMPAVAFERWYKRYLKRA 661 KP+ A AF K++ K A Sbjct: 860 KPIEANAFTNLLKKHNKLA 878 >UniRef50_C0Z6C0 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6C0_BREBN Length = 708 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 180/471 (38%), Positives = 285/471 (60%), Gaps = 13/471 (2%) Query: 201 RNKFVHSGSGKNEIF--------LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQ 252 RN + + S N I L+ D+T+ ++++E + LA D++T LPNR Sbjct: 239 RNDVIWTESKINPIMDEEGNVTKLLLITRDVTDRKQSEETIHHLAYHDALTDLPNRRMYV 298 Query: 253 DLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVL 310 + + A + + V++LDLD FK VND++GH GD LL + S + +CL+ V+ Sbjct: 299 QQLSKEMMQAKRFQSSLAVLFLDLDRFKDVNDSFGHDVGDMLLIEASKRLQACLKPGDVV 358 Query: 311 ARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSD 369 AR GGDEF ++ + ++ +A +I+ +L+ PF + SCS+GIAL P+ G + Sbjct: 359 ARLGGDEFTIMQNQLLDRNEATELAEQIMYQLQRPFELDGHVFNVSCSIGIALYPQDGDN 418 Query: 370 STAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK 429 +++ ADTA+YT K G+ + F P M + E + ++ +RKA+E +Q I+YQPK Sbjct: 419 PEDLLKRADTALYTVKSRGKNGYDFFDPSMEAKSLERILMENEMRKAIEQEQFQIYYQPK 478 Query: 430 I-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD 488 I + +EALVRW PE G+IPP FI AEE+G+I+ LG W++ +Q W D Sbjct: 479 IDIATSAMTGMEALVRWVHPELGIIPPNRFIPIAEETGMILALGEWILKQACKQNKNWHD 538 Query: 489 KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQ 548 +G L+V+VN+SARQ+ + + +K +LQE +++E+TES ++ +E A +V+Q Sbjct: 539 QGYTLKVSVNLSARQIYQKDLVEMIKDILQETKLSPHWLELEITESIFVKMEE-ATAVLQ 597 Query: 549 QFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQ 608 Q +G Q+ +DDFGTGYSS S + P+D IK+D F+RDIH SQ++V+AIV +AQ Sbjct: 598 QIRDIGIQISIDDFGTGYSSFSYIKSLPVDTIKIDASFIRDIHHNQESQAIVKAIVTIAQ 657 Query: 609 ALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 +LN+ VIAEG+E + A L +NG + QG+LF+KP+P F++ ++ L+ Sbjct: 658 SLNMNVIAEGIELHDQVAALKENGCDHGQGYLFSKPLPTDDFDQLLRQELQ 708 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 347 bits (891), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 182/437 (41%), Positives = 270/437 (61%), Gaps = 5/437 (1%) Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFK 278 D+TE R + L A D++TGL NRN + D + AI A D + V V+ LDLD FK Sbjct: 639 NDVTERVRYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLDRFK 698 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS-RI 337 +ND+ GH GD LL++ + + + + +AR GGDEF+V+ S+ S A + ++ Sbjct: 699 LINDSLGHAAGDALLQETARRLSASVRRGDTVARLGGDEFMVVMSDMSAEDAAAALAAKV 758 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L L P + E+ + S+G++L P G + +++HAD AMY AKE GR +F + P Sbjct: 759 LESLAEPMLLNGREIVATGSIGVSLYPRDGEAAATLLKHADVAMYRAKELGRNRFQFYAP 818 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPL 456 EMN+R+ E L L+ +LR+ALEND+L +HYQPK++ R G V EAL+RW+ P+ G++ P Sbjct: 819 EMNERILERLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMVSPA 878 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQ 515 DFI AEE+GLIVP+G WV+ RQ+ W D G+ + VAVN+SARQ + + L + Sbjct: 879 DFIPLAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHVLAR 938 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 L + VE+TES ++ E + +++ +G ++ LDDFGTGY SL+ L RF Sbjct: 939 ALAAHRLPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYLKRF 998 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 PID+IK+D+ FV D+ ++ IV++A +LN VIAEGVE+ + FL ++G +E Sbjct: 999 PIDSIKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHGCDE 1058 Query: 636 RQGFLFAKPMPAVAFER 652 QGFLF++P+PA F R Sbjct: 1059 MQGFLFSRPLPAAEFAR 1075 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 347 bits (891), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 213/560 (38%), Positives = 315/560 (56%), Gaps = 23/560 (4%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A QV ++I D+R I NR G E +V+GQ+ L +S Sbjct: 590 LRLAAQVFDSTQEGVMITDARRRIVSVNRAFTTLLGYTETEVLGQTPRML--------SS 641 Query: 170 RRNNRVFFRSGNA-------YEVELWIPTCKGQRLF-LFRNKFVHSGSGKNEIFLICSGT 221 R++R F+ + A ++ E+W G + L V G+ + + T Sbjct: 642 GRHDRDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRDPHGQVTHY-VGVFT 700 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKK 279 DIT + ++ RL LA+ D +T LPNR + +D A++ A+ ++ V+ LDLD FK Sbjct: 701 DITHLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREGRRLAVLLLDLDRFKD 760 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRIL 338 +ND+YGHL GD+LL+ V+ + L LAR GGDEF +L + A +AS +L Sbjct: 761 INDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMHDLRHDDDAARLASELL 820 Query: 339 TRLRLPFRIGL-IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 + L P+R +EV S+GI + P+HG +++ AD A+Y AK GRG + + Sbjct: 821 SGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYRAKGDGRGVYRYYAD 880 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPL 456 EM + E L ++ LR+AL + QL++HYQP++ R G + EALVRWQ PE+GLIPP+ Sbjct: 881 EMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEALVRWQDPEQGLIPPV 940 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQ 515 FI AE +GLI +G WV+ + RQ W D G+ L VAVN+S RQ + T + Q Sbjct: 941 RFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQADLATQVMQ 1000 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 VL E +++ELTE L+E + AL V+Q+ LG V +DDFGTGYSSL+ L RF Sbjct: 1001 VLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTGYSSLASLKRF 1060 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 PID +K+D+ F+ DI P + AI+A+ +L + V+AEGVE+A++ AFL + + Sbjct: 1061 PIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLAFLQQRNCDR 1120 Query: 636 RQGFLFAKPMPAVAFERWYK 655 QGFL ++P+PA AFE+ + Sbjct: 1121 YQGFLRSRPLPAQAFEQLLR 1140 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 347 bits (891), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 205/539 (38%), Positives = 301/539 (55%), Gaps = 34/539 (6%) Query: 133 IQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAA---------ASRRNNRVFFRS---- 179 I+ N E TG + IG+S L + E A A +R + R+ Sbjct: 373 IEYVNPAFERITGYTAAEAIGRSSSFLLRNDHEQAGLYEIRAALAEKREGKAVLRNYRKN 432 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANT 239 G+ + +L+I K GK F + + +DIT ++ + L LA+ Sbjct: 433 GSLFWNDLYIAPVK-------------DDEGKTTHF-VAAMSDITPMKQYETTLHRLASH 478 Query: 240 DSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVS 297 D +TGLPNR +QD +++AI ++ N V VV +DLD FK VND GH GD LL+ +S Sbjct: 479 DVLTGLPNRALLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIIS 538 Query: 298 LAILSCLEHDQVLARPGGDEFLVL---ASNTSQSALEAMASRILTRLRLPFRIGLIEVYT 354 + + + +AR GGDEF+++ + + RI+ + P I E + Sbjct: 539 DRLQASVRESDTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFL 598 Query: 355 SCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLR 414 SCS+GIA+ P G+D T ++ HAD AMY +KE GR F +TP MN + E L ++ LR Sbjct: 599 SCSMGIAVYPNDGADPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELR 658 Query: 415 KALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGR 473 A+E ++LV+HYQP++ G + LEALVRW P G++ P FIS AEE+GLI+P+G Sbjct: 659 HAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGA 718 Query: 474 WVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELT 532 WV+ RQ W+D G LR+AVN+SARQ ++ ++K LQE E +++ELT Sbjct: 719 WVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELT 778 Query: 533 ESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHK 592 ES ++ + E + ++ LG Q+ +DDFGTG+SSL+ L RFPID +K+D+ FVRDI Sbjct: 779 ESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAI 838 Query: 593 QPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 S+V +I+++A L L VIAEGVE+A + L G NE QG+ F KP+P+ E Sbjct: 839 NQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIE 897 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 347 bits (890), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 200/544 (36%), Positives = 315/544 (57%), Gaps = 7/544 (1%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 Q V ++ +AI+I D G I+ N TG HD+IG+ + S + + A+ + Sbjct: 311 QAVEQSSNAIIITDLNGTIEYANTTFSTNTGYALHDIIGKKP-NMHKSGKTSRATYADMW 369 Query: 175 VFFRSGNAYEVELWIPTCKGQ-RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 G +++ E G+ R+ L R V G+ +L DIT ++ AQ R+ Sbjct: 370 AHLGRGESWQGEFINRRHNGEERIDLVRVSPVREADGRITHYLAIE-EDITNQKNAQARI 428 Query: 234 RILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQ 291 LA+ D +TGLPNR + + A+ A+ ++ + V++LDLD+FK +ND GH GD Sbjct: 429 ESLAHFDVLTGLPNRALLDERAQRALRLAEEDQATLAVMFLDLDHFKNINDTLGHNLGDT 488 Query: 292 LLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIE 351 LL +++ + + L D L+R GGDEF++L ++ + + +A ++ + P+RIG E Sbjct: 489 LLVELAQRLRAVLRRDDTLSRLGGDEFVLLLPGANRESAKKIAQELMRAINEPYRIGSHE 548 Query: 352 VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDT 411 + S+GIA+ P G D + ++AD AMY AK+ GR + FT EM YL + Sbjct: 549 LNVMASIGIAVYPADGMDFETLCKNADVAMYRAKQEGRNAYRSFTQEMQAYSTRYLQVLN 608 Query: 412 NLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 LR+A+ +QL +HYQP+I+ G+V EAL+RW PE G I P +FI AEESGLI+ Sbjct: 609 ALRQAIAQEQLHVHYQPQISLISGDVIGAEALLRWHHPELGNISPAEFIPIAEESGLILQ 668 Query: 471 LGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDV 529 +G WV+ V Q KW G++ L +AVN+SA Q + + Q+L+E +F +++ Sbjct: 669 IGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSAVQFRHAGLPNLVMQILKEEDFPPQYLEL 728 Query: 530 ELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRD 589 ELTE + + + A++++ + G ++ +DDFGTGYSSLS L +F +K+DQ FVRD Sbjct: 729 ELTEGVAMHDPQGAIAMMNSLHERGVRMSIDDFGTGYSSLSYLKQFKAYKLKIDQSFVRD 788 Query: 590 IHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVA 649 I +++V AI+ +A+ L LQ IAEGVE+A++ AFL + G +E QG+ ++KP+PA Sbjct: 789 ISTDAEDKAIVSAIIGMAKNLGLQTIAEGVETAEQQAFLREEGCHEAQGYHYSKPLPAAD 848 Query: 650 FERW 653 FE + Sbjct: 849 FETF 852 >UniRef50_A1K5S9 GGDEF/EAL-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5S9_AZOSB Length = 1090 Score = 347 bits (890), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 183/438 (41%), Positives = 270/438 (61%), Gaps = 4/438 (0%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 D+T R A+ ++ LA+ DS+TGLPNR+A + A++ A ++ + V++LDLDNFK Sbjct: 648 DVTSAREAEAHIQYLAHYDSLTGLPNRSAWMNQARSALSLAQRHQHILAVLFLDLDNFKT 707 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRIL 338 VND+ GH GD+LL V+ + CL + AR GGDEF+ L +++ A+A ++L Sbjct: 708 VNDSLGHPVGDRLLAAVAQRLAHCLREEDSFARLGGDEFVALLPRVTRAEDAAAVARKML 767 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L P I E+ S S+GI+L P G+D +++HADTAMY AKE GR F F PE Sbjct: 768 DALATPVVIDDHELAPSVSIGISLFPSDGTDVDTLLKHADTAMYGAKEVGRNNFQFFVPE 827 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLD 457 MN R E L L+ LR+A+E ++L +HYQP++ + EALVRWQ P+ GL+PP Sbjct: 828 MNTRALERLLLENALRRAIERNELTLHYQPQVAATSDRPNGCEALVRWQHPDFGLVPPAQ 887 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVL 517 FI AE+SGLIVPLG WV+ + RQ KW G++L V VNISA Q ++ QVL Sbjct: 888 FIPIAEDSGLIVPLGEWVLREACRQQVKWARSGLHLMVGVNISALQFRRADFVDSVVQVL 947 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 E I++E+TES L++ + +++ + +G + LDDFGTGYSSL+ L R PI Sbjct: 948 AETGANPERIELEITESALMDASDALSRRLRELANMGLSLALDDFGTGYSSLAYLKRLPI 1007 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 +K+D+ FV+D+ P ++ A +++A+ L L+V+AEGVE+ + FL G + Q Sbjct: 1008 GRLKIDRSFVKDLPGDPEDAAVTAATLSLARDLGLEVVAEGVETVAQRDFLVARGCHTLQ 1067 Query: 638 GFLFAKPMPAVAFERWYK 655 G+L+++P+ AFE W + Sbjct: 1068 GYLYSRPLDVAAFEAWMQ 1085 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 347 bits (890), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 216/562 (38%), Positives = 320/562 (56%), Gaps = 47/562 (8%) Query: 122 SAIVILD--SRGN-IQRFNRLCEDYTGLKEHDVIGQ----------------SVFKLFMS 162 +AI+I + GN I+ N + TG +VIGQ ++ + + Sbjct: 487 NAILITEPSKEGNLIEYVNPAFKRITGYDPQEVIGQDCRLLQRDDRDQEGIAAIRQALAA 546 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWI---PTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 RE +A RN R + G + +L+I P GQ + I +I Sbjct: 547 NREVSAVLRNYR---KDGALFWNQLYIAPVPDADGQT--------------THHIAVI-- 587 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA--INHADNNKVGVVYLDLDNF 277 D+T R QE+L AN DS+T LPNRN ++D + HA + + V VV++DLD F Sbjct: 588 -NDVTALIRYQEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDGF 646 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASR 336 K VND+ GH GD+LL V+ + C +AR GGDEF+++ ++T + +L A R Sbjct: 647 KNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGDEFVIVMTDTVDEQSLIAWMER 706 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 + + P + E+Y CS+G +L P+ G D+ +++ AD AMY AK+ GR F + Sbjct: 707 VRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFYQ 766 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPP 455 PEMN L L+ LR+AL +++ ++HYQP++ G+V +EALVRW PE GLIPP Sbjct: 767 PEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIPP 826 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALK 514 FI AEESGLI PL WV+ + RQ W+D+G+ RV+VN+SARQ + I + Sbjct: 827 SQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLVM 886 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 QVL+E + +++ELTES ++ N E A+S++ + LG + +DDFGTGYSSLS L R Sbjct: 887 QVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLKR 946 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 FP+D +K+D+ FV DI + +++ AI+A+A +LNLQVIAEGVE++ + FL + + Sbjct: 947 FPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERACD 1006 Query: 635 ERQGFLFAKPMPAVAFERWYKR 656 E QG+ FAKP+P A +R Sbjct: 1007 EMQGYFFAKPLPHHAIPGMLQR 1028 >UniRef50_Q2SG37 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SG37_HAHCH Length = 841 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 179/430 (41%), Positives = 272/430 (63%), Gaps = 5/430 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKK 279 DITE RR + + A D++TGLPNR+ D + +INHA N ++ ++++DLD FK Sbjct: 263 DITERRRQEAAIEFQATHDALTGLPNRSLFLDRVTQSINHARRNESRLALIFIDLDKFKL 322 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRIL 338 +ND GH GD LLR +S + C + LAR GGDEF++L N S++ L +A+R++ Sbjct: 323 INDTLGHNAGDDLLRIMSKRLQECTRNCDTLARFGGDEFVLLVDNLESEADLTHLAARLI 382 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 + + P + +CS+GI+ PE G + ++RHAD AMY AKE GR + FT + Sbjct: 383 SSVSAPVLLLGQSHSITCSLGISSFPEDGDNVEVLMRHADIAMYRAKESGRNSYQFFTHQ 442 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 M R+ E L L+++L++ALEND+ V+HYQP++ G++ LEAL+RWQSP GL+PP D Sbjct: 443 MQDRLNERLKLESSLKQALENDEFVLHYQPQVDLSTGKIIGLEALIRWQSPTLGLVPPGD 502 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQV 516 FI AEE LI +G WVI V +++ WR +G+ + VA+NISA Q +Q +KQ Sbjct: 503 FIPAAEEGRLISAIGEWVIFAVCKRLQSWRRQGLKIVPVAINISALQFMEQKTEELVKQA 562 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L E E +++ELTES + + ++S++Q+ +G + +DDFGTGYS+LS L RFP Sbjct: 563 LNEYMVEPKYLELELTESLSMLDPVTSISLMQRLKDIGVSLSIDDFGTGYSNLSYLKRFP 622 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 ++ +K+D+ FV + P S+V+AI+ ++Q+L L+ IAEG E+A + A L + Sbjct: 623 VNKLKIDKSFVSGLTNNPDDYSIVKAIIRMSQSLGLKTIAEGAETAGQIALLAAENCDAI 682 Query: 637 QGFLFAKPMP 646 QGF F++P+P Sbjct: 683 QGFYFSRPLP 692 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 194/533 (36%), Positives = 312/533 (58%), Gaps = 9/533 (1%) Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA-YEVELWI 189 G ++ +N E + G + IG+++ L + A +R +G A E + Sbjct: 168 GTVRYWNLASELFYGYSAGEAIGRNLLDLVIPEGMRAEEKRRMLRMAETGRADPPSEQCL 227 Query: 190 PTCKGQRLFLFRNKFVHSGSGKN-EIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 G R+ + V G+ E++ + DI+E + +E+L LA D +TGL NR Sbjct: 228 LRRDGSRITVLSCHAVVRRPGEAPELYGL--DIDISERKINEEQLEYLATHDELTGLANR 285 Query: 249 NAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 D ++ ++++A + V V+ LDLD FK +ND+ GH FGD+LL V+ + + Sbjct: 286 ALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIINDSLGHSFGDRLLSAVAQRLDRVVRD 345 Query: 307 DQVLARPGGDEF-LVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPE 365 +AR GGDEF L+LA T + +ASRIL L +P RI E+ S S+GI+L P+ Sbjct: 346 TDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIEGREIVMSASLGISLYPK 405 Query: 366 HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIH 425 D + +IR+AD AMY AK+ G G F + PEMNQR E + +++ LR ALE + ++ Sbjct: 406 DSGDGSTLIRNADIAMYRAKQEGGGVFSFYAPEMNQRAMETMEIESALRLALERGEFTLY 465 Query: 426 YQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 YQPK+ G + EAL+RW P RG++ P DFI AEE+GLIVP+G WV+ + RQV Sbjct: 466 YQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWVLKEACRQVR 525 Query: 485 KWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 W+ +G+ + VAVN+SARQ + +++VL E + +++E+TES ++ + Sbjct: 526 AWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTESMVMADHAQV 585 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 ++V+++ + +G ++ LDDFGTGYSS + L+ FPI+ +K+D+ F++ I P S ++ +I Sbjct: 586 VAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIATSI 645 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 +A+A + L+ IAEGVE+ + A+L K G +E QG+L ++P+PA + +R Sbjct: 646 IAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEYAALVRR 698 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 201/559 (35%), Positives = 316/559 (56%), Gaps = 29/559 (5%) Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM----SRREAAA 168 A+ ++ A++ + +G++ N + E TG IGQ + ++F + RE A Sbjct: 266 AQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPREAAIGQPLSEVFRILNGTTREVAP 325 Query: 169 SR-----RNNRVFFRSGNAYEV-----ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLIC 218 + R NR + ++ + E I +H+ G+ +I Sbjct: 326 NPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAAP---------IHNRDGQVAGAVIV 376 Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDN 276 D++E R ++ LA D +TGLPNR + + + AI A N +VG+++LDLD Sbjct: 377 F-HDVSESRAMALKMAHLAQHDFLTGLPNRALLTERLSRAIGQARRHNKRVGMLFLDLDY 435 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MAS 335 FK +ND+ GH GDQLL+ V+ ++ C+ + R GGDEF++L + Q+ A +A Sbjct: 436 FKHINDSLGHAVGDQLLQQVAERLIVCIRDTDTVCRQGGDEFVILLAEIEQARDAAPIAE 495 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 ++L P I E++ S S+GI++ P+ G D+ ++++ADTAMY AK GR + F Sbjct: 496 KLLAAFAEPCLIAGNELHVSLSIGISIYPDDGMDADTVMKNADTAMYHAKANGRNNYQFF 555 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIP 454 T EMN R L+++ NLR+AL + +++YQPKI G + EAL+RWQ PE GL+ Sbjct: 556 TTEMNTRAVRRLFIEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGLVY 615 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTAL 513 P F+ AEESGLIVP+G WV+ + RQV W++ G + + V+VNISA + + + Sbjct: 616 PKQFVPIAEESGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLEGV 675 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 +L+E +++ELTES L+ + E + +V++ +G Q+ +DDFGTGYSSLS L Sbjct: 676 ALILKETGMLPSYLELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYLK 735 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RFPI+ +K+DQ FV DI P S+V A++ + + L +V+AEGVE+ ++ AFL Sbjct: 736 RFPINTLKIDQSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHC 795 Query: 634 NERQGFLFAKPMPAVAFER 652 +E QGFLF +P+PA F R Sbjct: 796 DEGQGFLFGRPLPADEFAR 814 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 345 bits (885), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 207/549 (37%), Positives = 309/549 (56%), Gaps = 11/549 (2%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A V ++I D G I NR + +G E +V+G++ L S R+ A Sbjct: 512 LRQAATVFESTREGVIITDLEGRILDVNRAFTEISGYSEPEVLGRNP-SLLRSNRQDHAF 570 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLF--LFRNKFVHSGSGKNEIFLICSGTDITEER 227 + ++ ++ E+W G+ L+ + V G+ + + TDI++ + Sbjct: 571 YQAMWHSLKTTGHWQGEIWNRRKSGE-LYPQILTINTVADSQGRPSHY-VGVMTDISQLK 628 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYG 285 +++ RL L + D +T LPNR +Q ++HA+ AD +V V+++DLD FK VND+ G Sbjct: 629 QSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLFVDLDRFKTVNDSLG 688 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLP 344 H GD LL ++ + + D LAR GGDEFLVL N + A+A +L+ L+ P Sbjct: 689 HPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDAAAVAESLLSLLQQP 748 Query: 345 FRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 F + E+Y S+GI+L P+ G T +I+HAD AMY AKE GR + +TP + Q Sbjct: 749 FHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGRNTYRFYTPSLTQTA 808 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYA 462 E L L+ L +AL +++ V+HYQ +I R G + EALVRW S GL+ P FI A Sbjct: 809 RERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSATEGLVAPDRFIPLA 868 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELN 521 EE+GLIVPLG WV+ WR +G+ +L VAVN+S RQL + + +VL+E Sbjct: 869 EETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSPDLVERVTRVLRETG 928 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 + +ELTES +++ E AL ++ LG ++ +DDFGTGYSSL+ L R PID +K Sbjct: 929 LPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYSSLAYLKRLPIDELK 988 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ FVRDI + + I+A+A+ L L VIAEGVE+ ++ FL + G QG+LF Sbjct: 989 IDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDFLIRQGCTAGQGYLF 1048 Query: 642 AKPMPAVAF 650 +P+PA AF Sbjct: 1049 GRPLPAEAF 1057 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 204/541 (37%), Positives = 308/541 (56%), Gaps = 7/541 (1%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 A V S A A +I D +G I R N + + TG E +V+G + + + +A Sbjct: 274 LAAHVFSNALEATLITDPKGRILRINPMFTELTGYGEAEVVGGNPRIIRSNHHDADFYAE 333 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRAQ 230 + FR G ++ E+W GQ + + V+ +G F I S DITE+ AQ Sbjct: 334 IWQAIFRDGR-WQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYF-IGSFRDITEQVEAQ 391 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLF 288 + LA+ D +T LPNR QD ++ A+ HA + + +++LDLD FKKVND GH Sbjct: 392 RHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKKVNDTMGHRA 451 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM-ASRILTRLRLPFRI 347 GD LL++V++ + C+ +AR GGDEF V+ S + +M A +IL L P I Sbjct: 452 GDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKILASLHAPIFI 511 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 +V+ S+GI+L P G+ +++HADTAMY AK G+G+F ++ EM +R L Sbjct: 512 DGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFYSAEMTKREEHRL 571 Query: 408 WLDTNLRKALENDQLVIHYQP-KITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 L+T LR+A+E Q +HYQP K V EALVRWQ P G+I P+DFI AEE Sbjct: 572 ELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISPVDFIPLAEEMH 631 Query: 467 LIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCP 526 LI + +V+ R+ +WRD+G ++ +AVN+S + + ++QVL++ F Sbjct: 632 LIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDLPEQVRQVLEDTGFPAEN 691 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 +++E+TES +I+ + V+Q+ LG ++ +DDFGTGYSSLS L R P++ +K+D+ F Sbjct: 692 LELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKRLPVNTLKIDRSF 751 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 VRDI + LV +I+ +A +L L+V+AEG+E + A L +E QG+L AKPMP Sbjct: 752 VRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECDEIQGYLIAKPMP 811 Query: 647 A 647 A Sbjct: 812 A 812 >UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Shewanella RepID=A0KRF8_SHESA Length = 1077 Score = 344 bits (883), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 206/567 (36%), Positives = 319/567 (56%), Gaps = 10/567 (1%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK 147 E A A A + + + +H LS A V + + I++ D+ +I+ N TG Sbjct: 486 ELARMAQAMNRMISERQKANHALSRAAAVFNYSAEGIMVTDADNHIELINPAFSQITGYS 545 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 +V G+S L +R + G +E E+W GQ + V Sbjct: 546 LEEVKGRSPSILSSNRHPHHYYTAMWEALHKEGK-WEGEIWNKRKDGQVYPEYLAITVVR 604 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNN 265 I I DI++ ++ ++ L AN D++TGLPNR + + H I A D+ Sbjct: 605 NEQGEIIQHIGLFMDISKRKQYEQDLWYQANFDTLTGLPNRKLFNERLQHEIQLAQHDSR 664 Query: 266 KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASN 324 K+ ++ +DLD FK +ND GH GD LL+DV+ + + + +AR GGDEF L+L Sbjct: 665 KLAILLIDLDQFKYINDVQGHATGDLLLQDVAKRLENIAGKNDFVARIGGDEFVLILPRV 724 Query: 325 TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 T++ A+E MASRI+ L PF + E+ S S GI + PE G D +++ R+ + AMY A Sbjct: 725 TNEFAIEHMASRIIETLATPFNLNEREIQISASFGIGVYPEDGLDVSSLTRNTEMAMYQA 784 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALV 443 K+ GR F FT MNQ +F + L+ LR+A+ D+ + YQP + + G++ S+EAL+ Sbjct: 785 KDAGRNNFKYFTSGMNQAMFARMELEQRLRRAVAQDEFTLFYQPIVDMKTGQICSVEALI 844 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQ 503 RWQ P+ GLIPP FI+ AEE+GLI P+G WV+ + + +W+ G+NL VA+N+S+RQ Sbjct: 845 RWQDPDLGLIPPDQFIAIAEETGLIEPMGEWVLNQAMHDLRQWQHMGLNLNVAINVSSRQ 904 Query: 504 LADQTIFTALKQVLQE-LNFEYCP---IDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 + T QVLQE N + + +E+TES L+ + LS ++ LG+Q+++ Sbjct: 905 CIN-TRGIGFDQVLQECFNRHHINPRNVHIEITESMLMGDASHCLSTLESIRHLGSQIYI 963 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSLS L +FPI IK+D+ FV + + +LV+AIV + Q+L ++++AEG+ Sbjct: 964 DDFGTGYSSLSYLKKFPISVIKIDRSFVEHALENCSNANLVKAIVMMGQSLEMELVAEGI 1023 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMP 646 E+ + FL G + QG+L +KP+P Sbjct: 1024 ETEAQWQFLRDLGCHYAQGYLLSKPLP 1050 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 344 bits (882), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 204/593 (34%), Positives = 331/593 (55%), Gaps = 19/593 (3%) Query: 74 DLSVHLVGRKINKRE----WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS 129 D+ +HLV + +R+ ++ + + H R L E + +A +++I DS Sbjct: 214 DVHMHLVADSVGQRDRVAIFSRDVTQSHQRRQQLRKL-------ETALEQAPVSVMITDS 266 Query: 130 RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWI 189 G I+ NR +G E +V+G++ +L S A+ R+ SG ++ EL Sbjct: 267 HGAIEYVNRAFVLVSGYSEDEVLGRNP-RLLKSGETVASLYRDMWHCLASGATWQGELCN 325 Query: 190 PTCKGQRLFLFRN-KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 G + + + G F+ +IT+ + +++L A D++TGLPNR Sbjct: 326 RAKDGSLFWEYATISPIRDDDGVVTHFMAVK-ENITQRKETEQQLVHQATHDTLTGLPNR 384 Query: 249 NAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 ++D + HAI A + ++G+++LDLD FK VND+ GH+ GD+LL+ VS + L Sbjct: 385 LLLEDRVHHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRR 444 Query: 307 DQVLARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPE 365 +AR GGDEF+V+ ++ S + L +A +I L P + +V+ S+GIA+ P+ Sbjct: 445 SDTVARLGGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPD 504 Query: 366 HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIH 425 G + A+++ ADTAMY AK+ GR FC + MN + L L+ LR+AL + + Sbjct: 505 DGDNFNALMKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLF 564 Query: 426 YQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 YQP++ + G +EAL+RW SPERG + P FI AEES LI +G WV+ + RQ+A Sbjct: 565 YQPQVDLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIA 624 Query: 485 KWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 WR+ G+ ++VAVN+S RQ + + + ++ + +++ELTES ++ + A Sbjct: 625 AWREAGLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRA 684 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 + + + ++G QV +DDFGTGYSSLS L R P+ IK+D+ FVRD++ Q + ++V AI Sbjct: 685 IEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAI 744 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 + +A AL++ ++AEGVE+ E+ L G + QGF +AKPMPA W R Sbjct: 745 LGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWMLR 797 >UniRef50_A5ETN6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=A5ETN6_BRASB Length = 1047 Score = 344 bits (882), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 205/552 (37%), Positives = 313/552 (56%), Gaps = 16/552 (2%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRF---NRLCEDYTGLKEHDVIGQSVFKLFMSR--RE 165 +F +++ S I++ D + +R+ N+ E G ++G+++F L M R E Sbjct: 490 AFLREIIDHIPSPIMVKDVQD--RRYVLVNKSSERCFGRPCEQIVGKTLFDL-MPRPIAE 546 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 AA+ + + G E W G R ++ + V + + +LI D TE Sbjct: 547 KAAADDDRALEHADGLVLEEHPWQTPGLGLR-YITSRRIVVTDDRQRPRYLINVIEDTTE 605 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKV-GVVYLDLDNFKKVNDAY 284 R A ER+ LA+ D++T LPNR ++ I H I A + ++YLD+D FK +ND+ Sbjct: 606 RRLADERIAHLAHYDALTELPNRVLFRERIAHEIERARHGMFFALLYLDIDEFKGINDSL 665 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRL 343 GH GD+LLR ++ I SCL + +AR GGDEF VL + + + + A + IL R+R Sbjct: 666 GHHVGDELLRTIASRIRSCLAPEDTVARLGGDEFAVLLTMAADRDEVIAKVTEILERIRE 725 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 P+R ++ T S+GIAL+PEHG + + +HAD AMY AK GR F F P M++ Sbjct: 726 PYRCLGHQLSTDASIGIALAPEHGVEIDQLTKHADLAMYAAKADGRHTFRFFEPAMDESA 785 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRS-LEALVRWQSPERGLIPPLDFISYA 462 E L L +LR+A+ Q +HYQP + +R + + EAL+RW+ PERG++PPLDFI A Sbjct: 786 RERLQLQQDLRRAITEGQFELHYQPLLGFRENIMTGCEALLRWRHPERGMVPPLDFIPLA 845 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNF 522 E++GLI +G WV+ + A W ++RVAVN+S QL T+ + L Sbjct: 846 EDTGLINEIGDWVMRTACAEAAHWPS---DIRVAVNVSPIQLKSPTLALHVASALSAAGL 902 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +++E+TE+ LI +D++AL ++ Q +G ++ LDDFGTGYSSLS L RFP D IK+ Sbjct: 903 APERLEIEITEAVLIGDDDVALDILHQLHAMGVRIALDDFGTGYSSLSYLKRFPFDKIKI 962 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 D+ FV DI S ++V+A+V++A A N+ AEGVE+ + L + G E QG+LF+ Sbjct: 963 DRCFVSDIGADS-SSAIVQAVVSIAAASNMTTTAEGVETGAQQTALRQLGCTEMQGYLFS 1021 Query: 643 KPMPAVAFERWY 654 P PA + + Sbjct: 1022 APKPAAELRKLF 1033 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 212/571 (37%), Positives = 315/571 (55%), Gaps = 39/571 (6%) Query: 107 SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF--------K 158 + L A V +VI D + I NR + TG E V+G++ K Sbjct: 563 AESLKQAAAVFESTREGVVITDLQPRIVAINRAYAEITGYSEEQVLGKNPRIIKSGRHDK 622 Query: 159 LFMSRREAAASRR--------NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 LF A+ ++ N R RSG+ Y L I T +F RN+ + Sbjct: 623 LFYQAMWASLTKAGYWRGEVWNRR---RSGDIYPQWLTIST-----VFNDRNEPCN---- 670 Query: 211 KNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVG 268 + TDIT+ ++++ RL LA+ D++TGLPNR +Q + HAI N++ Sbjct: 671 -----YVGVFTDITQIKQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIA 725 Query: 269 VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS 328 +YLDLD FK VND+ GH GD+LL ++L + L + LAR GGDEFLV+ + S Sbjct: 726 ALYLDLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDS 785 Query: 329 ALEAMASRILTRL-RLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKE 386 AM ++ L L PF + E++ + S+GI+L P + T +I+HAD AMY AK+ Sbjct: 786 NEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQ 845 Query: 387 GGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRW 445 GR + T ++ E L L+T LR+AL + V+HYQP I R G+V +EALVRW Sbjct: 846 EGRNTYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRW 905 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQL 504 Q P++ ++ P FI AEE+GLIVPLG WV+ Q W D L +AVN+S RQ Sbjct: 906 QPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQF 965 Query: 505 ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGT 564 + + ++QVL+E +++ELTES +E+ E ++ +++ LG ++ +DDFGT Sbjct: 966 QSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGT 1025 Query: 565 GYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE 624 GYSSL+ L RFPID +K+DQ FV + P + + I+A+A+ L L V+AEGVES ++ Sbjct: 1026 GYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQ 1085 Query: 625 DAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 L ++G + QG+LF +P+PA E W++ Sbjct: 1086 LDILNQHGCDYYQGYLFHRPVPAQELEVWFR 1116 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 342 bits (877), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 177/435 (40%), Positives = 271/435 (62%), Gaps = 6/435 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 ++ E RA+ER+R +A DS+TGLPNR D + ++ A +K + V++LDLD FK Sbjct: 181 EVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFKL 240 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHD-QVLARPGGDEFLV-LASNTSQSALEAMASRI 337 +ND GH GD+LL V+ + +C + +AR GGDEF++ L++ + +A +I Sbjct: 241 INDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQKI 300 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 + R PF I E++ + S+GI++ P G A++++AD AMY AKE GR +F P Sbjct: 301 IDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNCQLFAP 360 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPL 456 EMN R FE L L+ ++R+ALE D+ V+HYQPK+ G++ +EALVRWQ P GL+PP Sbjct: 361 EMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPPS 420 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQ 515 FI AEE+GLIVPLG WV+ +Q W+D G ++VAVN+S RQL + + + Sbjct: 421 RFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVAR 480 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 VL E + +E+TES L+++ E + ++ ++G ++ +DDFGTGYSSL L +F Sbjct: 481 VLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKKF 540 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P+ +K+D+ FVR+I P +++ A++++A+ LNL V+AEGVE+ ++ L Sbjct: 541 PVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCRY 600 Query: 636 RQGFLFAKPMPAVAF 650 QGFLF++P PA F Sbjct: 601 MQGFLFSEPAPAEQF 615 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 183/436 (41%), Positives = 270/436 (61%), Gaps = 5/436 (1%) Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDH--AINHADNNKVGVVYLDL 274 + S TDITE + A+ +++ LA D +TGL NR ++Q +D A+ + + VV+LDL Sbjct: 764 VASFTDITERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDL 823 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-M 333 D FK +ND+ GH GDQLL +V+ + + ++AR GGDEF+V+ + +A A + Sbjct: 824 DRFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARV 883 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 A ++L L +RIG ++T+ S+GI+L P G D+ A++++ADTAMY AK GR Sbjct: 884 ADKLLGALVPRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRDNVQ 943 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGL 452 FTPEMNQ V + L D +LR A+E Q +HYQP+I + G V +EALVRWQ P GL Sbjct: 944 FFTPEMNQSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGL 1003 Query: 453 IPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFT 511 + P +FI AEE+GLI+PLG WV+ + RQ+ WRD GI +L VAVN+SA QL + Sbjct: 1004 VSPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIP 1063 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 + + L E + +E+TES + + +++ +Q LG + +DDFGTGYSSLS Sbjct: 1064 MVARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSY 1123 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L PID +KLDQ FV +I P ++ A +A+A +L L+V+AEG+E+ + L + Sbjct: 1124 LKLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASH 1183 Query: 632 GINERQGFLFAKPMPA 647 + QG+LF+ P+PA Sbjct: 1184 RCDFMQGYLFSAPLPA 1199 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 4/135 (2%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 +R+L + ++ A + +V+LD G I+RFNR CE T +V G+ V+ Sbjct: 398 SRELRELSALQGAILEHAGALVVVLDREGRIRRFNRACEALTQYSFSEVEGRQVWDFIPP 457 Query: 163 RREAAASRRNNRVFFRSGNAYEVEL---WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 V F L W+ G+RL + N +H GK E F++ Sbjct: 458 EERRIVQDEAFAVLFNDPEQSRSTLTNHWVARDGGRRLIEWSNSVLHDAQGKVE-FVVAV 516 Query: 220 GTDITEERRAQERLR 234 G D+T++ RA+ L+ Sbjct: 517 GNDVTDKMRAEAALK 531 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 341 bits (874), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 179/437 (40%), Positives = 269/437 (61%), Gaps = 5/437 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKK 279 DIT+ RR QE L A D++TGLPNR+ ++D ++ A+ A V ++ DLDNFK Sbjct: 422 DITDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMFDLDNFKV 481 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRIL 338 VND GH GDQLLR V+ I S + + AR GGDEF+++ +N T +A Sbjct: 482 VNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLTRMDDAVTVAESFR 541 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L +PF +G E++ + S+GI+L P+ G A+I+ ADTAMY KE GR F F E Sbjct: 542 NLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTAMYHIKESGRNSFQFFAEE 601 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLD 457 MNQ+V L ++T LR+ALE ++++HYQP++ G V +EALVRW SP+ GLI P D Sbjct: 602 MNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDMGLISPAD 661 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQV 516 FI AE+SGLIV +G WV+ Q +W G + LRV+VNISARQ + ++ Sbjct: 662 FIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDFVDRVVRI 721 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 +++ +++ELTE+ L N + + ++ + + G + +DDFGTGYSSL+ L RFP Sbjct: 722 IEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSLNYLKRFP 781 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 +D +K+D+ F+ D+ K+ ++V I+ +A ++++V+AEGVE+A++ L + E Sbjct: 782 VDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLMEGNCEEI 841 Query: 637 QGFLFAKPMPAVAFERW 653 QGF F++P+P FER+ Sbjct: 842 QGFYFSRPLPPEEFERY 858 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 340 bits (873), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 203/563 (36%), Positives = 325/563 (57%), Gaps = 28/563 (4%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 + A +V I+I D+ I+ NR TG + +V+GQ + + +S Sbjct: 381 MQLAAKVFENTVEGIMITDADKRIRSVNRAFSQITGFGQQEVLGQ--------KPDMLSS 432 Query: 170 RRNNRVFFRS-------GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI----FLIC 218 R++ F+ + +++ ELW G+ +++ + +N + + Sbjct: 433 GRHDETFYEAMWSAINEHGSWQGELWNRRKNGE----VYPEWLAISAVRNAVGEITHYVA 488 Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDN 276 +D++E + A ER++ LA+ D +TGLPNR +QD ++ AI +A DN ++ ++ LDLD Sbjct: 489 IFSDLSERKAADERIQFLAHFDVLTGLPNRAHIQDRVELAIQNATRDNERLALLLLDLDR 548 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS- 335 FK +N++ GH GD LL+ ++ I S L +V+AR GGDEF+VL + A+A+ Sbjct: 549 FKTINESLGHSAGDALLQVLAERIRSTLLTGEVVARQGGDEFIVLLPLIADPGSAALAAE 608 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 RI L P + + + S+GI++ P+ G D ++R+AD AMY AK GR + + Sbjct: 609 RIREVLEPPVELFNHSISITPSIGISVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFY 668 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIP 454 T ++N R E L +++ LR AL+ D+ V+HYQP++ + GE+ EAL+RWQ PE GL+ Sbjct: 669 TADLNARAREILEIESQLRYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLG 728 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTAL 513 P+ FI AEE G IV +G WVI + RQ+A+WR +G+ + +AVN+S Q Q + L Sbjct: 729 PVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHL 788 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 ++ L +DVE+TES ++++ E + I + +G Q+ +DDFGTGYSSLS L Sbjct: 789 QRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLK 848 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RF D +K+D+ FVRDI ++ RAI+ +A+ LN+ VIAEGVE+ ++ FL + G Sbjct: 849 RFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQWKFLDREGC 908 Query: 634 NERQGFLFAKPMPAVAFERWYKR 656 + QG+L AKP+PA FER ++ Sbjct: 909 HAAQGYLLAKPVPAKEFERLLEK 931 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 340 bits (873), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 199/548 (36%), Positives = 305/548 (55%), Gaps = 10/548 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L V + A + I D++ I N D TG ++ G++ L R++AA Sbjct: 316 LHLYANVFTNASEGMAITDAQARIVAVNPAFTDITGYSIEEIHGRTPAVLASGRQDAAFY 375 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRL--FLFRNKFVHSGSGKNEIFLICSGTDITEER 227 R + G ++ E+W G+ +L G + I S DIT+ + Sbjct: 376 REMWATLGKRGQ-WQGEIWNRRRSGEIYPEWLSITAITEGDGGVSHYIGIFS--DITDRK 432 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYG 285 ++ R+R LA+ D++TGLPNR +QD + AI A N + V++LDLD FK +ND G Sbjct: 433 ESEARIRHLAHHDALTGLPNRLLLQDRLGQAILKARRNSTQAAVLFLDLDRFKTINDTLG 492 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLP 344 H GD LLR V+ L + +AR GGDEF+++ + +A +IL L P Sbjct: 493 HEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFVIVLPDLEHGQDAGTIARKILAALTEP 552 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 R+G E+ + S+GIAL P G+D + ++R+AD AMY AK GR F + +MN Sbjct: 553 CRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAAMYRAKADGRNGFQFYAADMNTHSL 612 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAE 463 L L+ LR AL+ ++L +++QPK+ G + EAL+RWQ P+ GL+ P F+ AE Sbjct: 613 GELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGCEALLRWQHPDLGLLAPGRFVPAAE 672 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNF 522 ESGLIVP+G WV+ + RQ+ W D G+ + VAVN+S +Q A Q I +++ L E Sbjct: 673 ESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVNLSGQQFAHQDIVALVREALAEHRL 732 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +++ELTE+ L+ + E ++ + + +G + +DDFGTGYSSL+ L +F ++A+K+ Sbjct: 733 PAPMLELELTETMLMRDLERTIATLAELRAMGVTLAIDDFGTGYSSLAYLRQFDVNALKI 792 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 D+ FV DI + A++A+A L L V AEGVE+A + FL ++G ++ QGFLF Sbjct: 793 DRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVETAAQQHFLARHGCDQLQGFLFG 852 Query: 643 KPMPAVAF 650 +P PA AF Sbjct: 853 QPEPAEAF 860 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 340 bits (873), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 194/545 (35%), Positives = 308/545 (56%), Gaps = 7/545 (1%) Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 V ++ ++IVI D NI+ N TG +V+G++ + S + A+ + Sbjct: 604 VEQSPNSIVITDLDANIEYANSNFTKVTGYSLDEVLGKNP-RFMQSGKTPKATYEDMWAH 662 Query: 177 FRSGNAYEVELWIPTCKG-QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 G ++ EL+ G + + V G+ +L DITE+R +ER+ Sbjct: 663 LTRGEPWKGELFNRRKDGTEYIESVLISPVSQVDGRVMNYLAIK-EDITEKRLTEERIEK 721 Query: 236 LANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLL 293 L + D +TGLPNR + + +A++ A ++ V++LDLD+FK +ND GH GDQLL Sbjct: 722 LEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLDHFKDINDTLGHSIGDQLL 781 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVY 353 DV+ + L + ++R GGDEF+++ T ++ +A++++ + F+ E+ Sbjct: 782 MDVAKRLKETLRDEDTVSRQGGDEFILILPGTDENGAAHVAAKLMEAVSQAFQFEQHELV 841 Query: 354 TSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNL 413 +CS+GIA+ P G + + ++ADTAMY K GR FC FT EM L L L Sbjct: 842 ATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRNGFCFFTSEMQAHSARTLQLGNAL 901 Query: 414 RKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLG 472 R AL QL +HYQP+I T G V EAL+RWQ PE G I P +FI AE++G I+P+G Sbjct: 902 RHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSISPAEFIPIAEDNGQIIPIG 961 Query: 473 RWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVEL 531 WV+ ++Q+ W D G+ + +AVN+SA Q + + +L E + +++EL Sbjct: 962 EWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELVTSILDESKVPHRYLELEL 1021 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TE+ +++ +LA+ V+ + G ++ +DDFGTGYSSLS L RF + +K+DQ FV DI Sbjct: 1022 TEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLKRFKVYKLKIDQSFVHDIT 1081 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 P +++V AI+ +A +L +Q IAEGVE+A + +FL G NE QG+ F+KP+PA F Sbjct: 1082 DDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGCNEVQGYYFSKPLPAEQFV 1141 Query: 652 RWYKR 656 + ++ Sbjct: 1142 SYLQK 1146 >UniRef50_C6D7W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=C6D7W4_PAESJ Length = 1095 Score = 340 bits (873), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 200/601 (33%), Positives = 346/601 (57%), Gaps = 30/601 (4%) Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + +TVD + ++ + + I ++ A NA L S +V ++ + Sbjct: 354 LPITVDNRIVGIYSIAKDITTKKQAENA------------LIEAESKYRSLVEKSIVGVY 401 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I+ + I N D G KE +IG S++ + + + ++N ++ + +A Sbjct: 402 II-QKNIILYANPYLIDMLGYKE-AIIGMSIWDIVYPD-DYSVVKQNIQILYNETDAIRH 458 Query: 186 ELWIPTCKGQRL--FLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 L + T +G+ L ++ N+ ++ GS +I + D+TE +RA+E LA DS+T Sbjct: 459 PLRVLTAEGKLLDVEMYSNRIMYQGSPA----VIGTILDVTERKRAEELNAFLAYHDSLT 514 Query: 244 GLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 LPNR ++++++A+ A + V+YLD+D FK +ND+ GH GDQLL S + Sbjct: 515 ELPNRRKFEEMLENALETAKTARRHFAVMYLDMDRFKYINDSLGHAVGDQLLIAFSKRLQ 574 Query: 302 SCLEHDQVLARPGGDEFLVLASNT--SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 + AR GGDEF V+ + + SA+E +A RI+ R R PF I E++ + S+G Sbjct: 575 EQIRETDFAARMGGDEFTVILPHIRDNNSAIE-VARRIIERTREPFYIEDYELFITTSIG 633 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 I++ P G DS+ ++++AD+A++ AK+ G+ + +FT MN + ++ L+ +LRKA++ Sbjct: 634 ISIYPNDGDDSSTLMKNADSALFRAKDLGKNGYQIFTSSMNVQTYKVFTLEKDLRKAIQR 693 Query: 420 DQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 D+L ++YQPK+ GE+ EAL+RW PE GL+ P +FI +EE+GLI+ LG WV Sbjct: 694 DELEMYYQPKVNIHTGEIVGAEALIRWNHPEWGLVSPNEFIPISEETGLILSLGNWVKRT 753 Query: 479 VVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 V RQ +W+ G+ + +++N++A++ + A++Q+L E E +++E+TES L+ Sbjct: 754 VCRQNKEWQLAGLKPIPISINVTAKRFLSKDFMDAIQQILAETGLEPHYLEIEITESSLL 813 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP--IDAIKLDQVFVRDIHKQPV 595 EN E + + ++LG + LDDFGTGYSSLS L RF I+ +K+D+ F+ D+H+ Sbjct: 814 ENAETVMHTLDSLNKLGVTISLDDFGTGYSSLSYLKRFKHTINILKIDRSFIHDLHQGSD 873 Query: 596 SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +++ AI+ +AQ +N+ V+AEGVE+ ++ L + QG+LF++P+ A AF + K Sbjct: 874 DNAIISAIIQLAQHMNMSVVAEGVETGEQLHILKLLKCDLVQGYLFSRPVQAEAFAQLLK 933 Query: 656 R 656 R Sbjct: 934 R 934 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 340 bits (872), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 196/538 (36%), Positives = 301/538 (55%), Gaps = 7/538 (1%) Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 ++I D I N + T ++G++ + ++AA RR R SG Sbjct: 342 GVIITDHHRRILAVNAAFGEITRYPVEALLGRTPPLWRTAHQDAAFYRRIWRQLLASGR- 400 Query: 183 YEVELWIPTCKGQRLFLFRN-KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 +E ELW G L+ + V G+ ++ DI++ + +QE+L LA+ D Sbjct: 401 WEGELWHRKRDGTPFPLWLSISCVRDEQGRPRQYVFVF-NDISQLKDSQEQLERLAHYDP 459 Query: 242 ITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +TGLPNR+ ++HA+ A + + V+++DLD FK +ND+ GH GD+LL ++ Sbjct: 460 LTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVAIAQR 519 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRI-GLIEVYTSCSV 358 + L + LAR GGDEFLV+ + ++A +L + PF G E Y S+ Sbjct: 520 LHQRLRQEDTLARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYVGASI 579 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 GI+L P G ++ +IR+AD AMY AK G + +T + + E L ++T+LR+AL Sbjct: 580 GISLYPGDGRSASELIRNADAAMYLAKAQGSNAYRFYTESLTRAANERLSMETSLRRALR 639 Query: 419 NDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 ++ V+HYQP + G V E LVRWQ P L+PP FI AEE+GLIVPLG WV+ Sbjct: 640 CEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGDWVLH 699 Query: 478 DVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 + RQ W D G+ L +AVN+S RQ + +++ LQ +++ELTE L+ Sbjct: 700 EACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTEGALM 759 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 E E A+ + +LG + +DDFGTGYSSL+ L RFP+D +K+D+ FVRD+ + Sbjct: 760 EQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRDSSDA 819 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +V I+A+ + L L+ +AEGVE+ ++ AFL + G + QG+LF+ P+PA AFERW + Sbjct: 820 EIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERWLR 877 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 212/558 (37%), Positives = 311/558 (55%), Gaps = 11/558 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L QV ++ AIVI D+ I R NR TG +E + +GQSV L M+ EA Sbjct: 427 LQLTAQVFDQSSEAIVIADASHRIVRINRAFSRITGYQESEAVGQSVRLLTMA--EAGPD 484 Query: 170 RRNNRVFFRSGNA--YEVELWIPTCKGQRLFLFRN-KFVHSGSGKNEI-FLICSGTDITE 225 + V+ R +E E W G + + V G I I DI+ Sbjct: 485 CNADAVYARLARQERWEGESWGRRKDGSGYPQWLSVSSVRDGDANGPITHSITLFRDISL 544 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDLDNFKKVNDA 283 +R AQER++ LA+ D +T LPNR + + I A ++ +++LDLD+FK VND+ Sbjct: 545 QREAQERIQRLAHFDPLTDLPNRVLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDS 604 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRL 343 GH GD LL V+ + S + ++R GGDEFL+L TS + +AS +LT + Sbjct: 605 LGHRIGDILLVAVARRLQSLIGPQDTVSRLGGDEFLLLLPATSAAHAAKVASALLTAVAQ 664 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 PF+I E+ T+ SVGIA+ P G + + AD AMY+AK+ GR ++ FT ++ R Sbjct: 665 PFQIDPYELSTTLSVGIAMCPADGESFDTLYQRADAAMYSAKQSGRNRYGFFTADLQART 724 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYA 462 L ++ LR+ALE Q +HYQP+++ G+V EAL+RW PE G++ P +FI A Sbjct: 725 ARALQIENALRRALERQQFELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVA 784 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELN 521 E SG IV LG WV+ R +W D + LR V+VN+SA Q + + + LQ+ Sbjct: 785 ENSGQIVALGEWVLHTAARDAKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAG 844 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 +++ELTE +++ AL+++ Q G ++ +DDFGTGYSSLS L RF I +K Sbjct: 845 LPARRLELELTEGAAVDDPVAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLK 904 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +DQ FVRD+ +++V AI+ +AQAL +Q AEGVE+ + FL G +E QG+LF Sbjct: 905 IDQSFVRDLDDDANDRAIVSAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLF 964 Query: 642 AKPMPAVAFERWYKRYLK 659 ++P+PA AFE Y R +K Sbjct: 965 SRPLPADAFEA-YLRAMK 981 >UniRef50_UPI00016AFAA6 predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AFAA6 Length = 709 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 181/435 (41%), Positives = 269/435 (61%), Gaps = 5/435 (1%) Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLD 275 C+ DITE ++A+ R+R +A D++TGLPNR +Q+ + AI A + V + LDLD Sbjct: 256 CNVRDITERKQAEARVRYMALHDALTGLPNRALLQEHLAQAIARARREGGCVAALMLDLD 315 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV-LASNTSQSALEAMA 334 FK VND+ GH GD+LL S+ + CL +AR GGDEF++ LA +A Sbjct: 316 RFKHVNDSLGHHIGDRLLEAASMRLRGCLREGDTVARLGGDEFVIGLADVDGDQGAGEVA 375 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 +R+LT L PF + E++ CS+GI+ P G D ++R ADTAMY AK GRG + Sbjct: 376 TRVLTTLSRPFFVENHELHVGCSIGISRYPADGEDVQTLLRAADTAMYDAKANGRGIYRF 435 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLI 453 FTPE+N + L L ++R A + + V+HYQP++ T G + +EAL+RW+ PE GLI Sbjct: 436 FTPELNAAAQQRLALARDIRYAFDRGEFVLHYQPQVCTHSGAITGVEALLRWRHPEHGLI 495 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTA 512 PL F+ EE GLIV +G+WV+ +Q +W+ G+ +R+AVN+SA QL I Sbjct: 496 SPLQFVPMLEELGLIVAVGQWVLRTACQQSVQWQSAGLPPVRMAVNLSAYQLQRGDIVRT 555 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + + L+E +++ELTE+ + N + A+ ++++F QLG + LDDFGTG+SSLS L Sbjct: 556 VDEALRETGLAAEWLELELTETMALYNAQEAIRIMREFKQLGVSLSLDDFGTGWSSLSYL 615 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 +FPID IK+D+ F+RD+ P + ++V+ I+ +A L LQ IAEGVE+ ++ FL + Sbjct: 616 RQFPIDRIKIDRSFIRDVVTHPGASAVVQGIMTLANHLGLQCIAEGVETVQQFGFLQERA 675 Query: 633 INERQGFLFAKPMPA 647 E QGFL + +PA Sbjct: 676 CGEIQGFLVSPALPA 690 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 196/553 (35%), Positives = 312/553 (56%), Gaps = 33/553 (5%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L+ ++QV AI+I D NI N+ D TG D +G + + Sbjct: 497 LNLSKQVFDNTSEAILIADRDRNILEVNQAYLDMTGYGREDCVG--TYLALLDEPAGGGQ 554 Query: 170 RRNNRVF------------FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 N V RSG Y + I T VH G + +++ Sbjct: 555 LIGNLVQQHGKWMGELLAQKRSGEYYPAWVSIST-------------VHDNHGSLQNYVV 601 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLD 275 TDI++ ++A+ERL+ LA D +TGLPNR +Q+ ++ A+ A + VGV+++DLD Sbjct: 602 VL-TDISQRKQAEERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLD 660 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMA 334 FK +ND GH GD LL++V+ + CL +AR GGDEF+VL + Q L +A Sbjct: 661 RFKIINDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVA 720 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 +I+ L PF + E+Y S S+GI++ P+ G D ++++++AD AMY AK+ G+ F Sbjct: 721 RKIMHALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKNTFHF 780 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLI 453 ++ + N L L+ +LR+ALE ++ + YQ K+ + + EAL+RW S E G++ Sbjct: 781 YSADGNANSVSRLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMV 840 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTIFTA 512 P DFI AEE+G+I+ +G WV+ R W++ G +RV VNISARQ + +++ A Sbjct: 841 SPQDFIPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQA 900 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + L+E +++E+TES +++N E A ++Q F LG+ V +DDFGTGYSSL L Sbjct: 901 ISNALEESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYL 960 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 FPID++K+D+ FVRDI + ++ +AI+A+A +L + V+AEGVE+ + FL G Sbjct: 961 KHFPIDSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQG 1020 Query: 633 INERQGFLFAKPM 645 ++ QG++F++P+ Sbjct: 1021 CDQLQGYIFSRPL 1033 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 202/566 (35%), Positives = 316/566 (55%), Gaps = 19/566 (3%) Query: 103 ARDLS-----HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 ARDL+ L AE+V+ + +++ D+ I N TG +V+G + Sbjct: 291 ARDLALSASQRDLYLAEKVIESSLEGVMVTDAHARILSVNPAFTRMTGYAPEEVVGLNPS 350 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L R+ A R G ++ E+W G+ + +H + ++ ++ Sbjct: 351 VLNSGRQSPAFYARMWDGLLGDGQ-WQGEVWNRRKTGE----VYPQLLHITAIRDREGVL 405 Query: 218 CSG----TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVY 271 TDI+ + + R+R LA D +TGLPNR + D + + HA ++ V++ Sbjct: 406 THYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRLLDDRLQVELAHAARLRCRLAVMF 465 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE 331 +DLD FK++ND+ GH GD+LL +++ + + L D +AR GGDEFLV+ +N S Sbjct: 466 VDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMGGDEFLVVLNNLSGPDEA 525 Query: 332 A-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 A MA R++ LR P + E+ + SVG+A+ P+ D+ +++HAD AMY AK+ GR Sbjct: 526 ATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTLVKHADVAMYRAKDEGRN 585 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPE 449 F +F P MN R E L L+T L +AL D+L +++QP + G E+ ++EAL+RW+ P+ Sbjct: 586 SFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVMKAEGGELVAVEALLRWRHPD 645 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQT 508 GL+ P DFI AE++GLIVP+G WV+ +W + G L + VNISARQ ++ Sbjct: 646 LGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGAPLHMMVNISARQFREEG 705 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + VL E + +ELTES L+++ + AL+ + LG + +DDFGTGYSS Sbjct: 706 FAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLRALGVCLAIDDFGTGYSS 765 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 L+ L RFPID +K+D++FVR I + +LV AIV++ +L L+V+AEGVE+A L Sbjct: 766 LAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLGLRVVAEGVETAAHLDVL 825 Query: 629 TKNGINERQGFLFAKPMPAVAFERWY 654 + G + QGF F+ P+P F + Y Sbjct: 826 RRQGCDLAQGFHFSPPLPWEEFVKAY 851 >UniRef50_Q0AAU4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAU4_ALHEH Length = 723 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 196/559 (35%), Positives = 301/559 (53%), Gaps = 16/559 (2%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN-- 173 +V + I +LD+ G NR E G+ ++G+ L A A RR N Sbjct: 161 IVDNSPDFIYVLDAEGRFTFINRSAERLLGMTPDTLLGEHFQCLIADEDRAVAERRFNER 220 Query: 174 RVFFRSGNAYEVELWIPTCKGQRL----FLFRNKFVHSGSGKNEIFLICSGT--DITEER 227 R R+ + E++L P GQ + + FL G D+T+ + Sbjct: 221 RTGQRATHNLELQLAPPGAAGQPTRTVDLTAMGIYADGDAPHPGQFLGTYGIARDVTDRK 280 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYG 285 A+ + A+ D +TGLPNR ++D + A+ A N +V V++LDLD FK VND+ G Sbjct: 281 HAESIVHYQAHHDLLTGLPNRALLKDRLAQALARARRGNEEVAVLFLDLDRFKVVNDSLG 340 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMASRILTRLRLP 344 H GDQLL+ V+ + +CL LAR GGDEF L+L + + A+E +A + + L P Sbjct: 341 HSVGDQLLQQVAQRLRACLREGDTLARLGGDEFTLLLPAIPDRPAVERVAQKCIDALEQP 400 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 F + ++ S+GIAL PEHG +I+HAD AMY KE G+G + F M R+ Sbjct: 401 FMVHNHRLFLGVSIGIALFPEHGETLETLIKHADVAMYHVKEHGKGHYTFFDQAMGSRID 460 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAE 463 +L ++T LR+ALE + + YQP++ G V +EAL+RWQ PE G + P +FI AE Sbjct: 461 HHLNMETGLRRALEQHEFRVAYQPQVDVVSGRVTGMEALIRWQHPETGEVSPREFIPVAE 520 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFE 523 ++GLI+P+G W++ ++ +W D LR+AVN+S Q+ + ++ + E F Sbjct: 521 QTGLILPIGEWLLRSACEELLRWPDGNEGLRLAVNLSPLQVHQRDFVDRVRAICDETGFP 580 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 +D+E+TE+ L+ + E + ++ S+LG + +DDFGTGYSSL L R PI A+K+D Sbjct: 581 LRRLDLEITENLLMRDVESVVEKLRTLSRLGVTITIDDFGTGYSSLGYLQRLPIHALKID 640 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 Q FV I + +LV I+A+A L L V+AEGVE+ ++ +L + QGF F+ Sbjct: 641 QSFVHAIRENEEKGTLVETIIAMAHGLGLNVVAEGVETKRQLDYLRRLQCGRMQGFYFSY 700 Query: 644 PMPAVA----FERWYKRYL 658 P+ E W + +L Sbjct: 701 PLSGHEAVDLLEGWAREHL 719 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 207/589 (35%), Positives = 325/589 (55%), Gaps = 18/589 (3%) Query: 84 INKREWAGNASAWHDTPAVARDLS------HGLSFAEQVVSEAHSAIVILDSRGNIQRFN 137 +N+ + G+A A ARD+S L A QV ++ AI+I D I N Sbjct: 46 VNQLNYQGDAYLC----ATARDISGRRQTERQLRLAAQVFESSNEAILISDPDNRILTVN 101 Query: 138 RLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRL 197 R TG E +V G LF R E A ++ + + G + E+W G+ Sbjct: 102 RAFGHITGYGEAEVRGSKASMLFSDRHEPAFFQQMWQTLQQRGQ-WSGEIWNRRKSGEHF 160 Query: 198 FLFRN-KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLID 256 + N + G G+ F + TDI+E + + R++ +A D++T LPNR + D + Sbjct: 161 PCWVNISVLQDGQGEISHF-VALFTDISERKEQEARVQHMAEYDALTDLPNRVLVNDRLH 219 Query: 257 HAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPG 314 AI A+ +N++ V+++DLD+FK +ND GH GD+LL++V+ + + + R G Sbjct: 220 QAIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAVRGLDTVGRTG 279 Query: 315 GDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAI 373 GDEF+++ + +Q A +A RIL ++ PF+IG + CS+GI+L P+ GSD + Sbjct: 280 GDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLMPDDGSDIQTL 339 Query: 374 IRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR 433 + +AD AMY AK GR F +T EMN +V E L ++ LR+A+E +QL + YQP+ Sbjct: 340 LMNADLAMYHAKAHGRNTFRFYTREMNTQVAERLLMENRLRRAMEQEQLYLVYQPQYDMA 399 Query: 434 GE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN 492 G+ + EAL+RW+ P+ GLI P FI AE++GLIVPLGRWV+ RQ + W G+ Sbjct: 400 GQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQASLWLRAGLE 459 Query: 493 -LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFS 551 +RVAVN+SA QL +++ LQ +++E+TES L+ + +LA + Sbjct: 460 PMRVAVNVSAHQLMRHDFIDDVREALQRHALPGHCLELEVTESTLMADADLASRQLAVIK 519 Query: 552 QLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALN 611 +G ++ +DDFGTGYSSL+ L RF D +K+D+ F+ D+ + ++V AIV +A AL Sbjct: 520 AMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVSAIVHLAGALG 579 Query: 612 LQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 ++ +AEGVE+ + FL G QG+L P+ R ++ +R Sbjct: 580 METLAEGVENENQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRLEQQQRR 628 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 178/429 (41%), Positives = 276/429 (64%), Gaps = 5/429 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKK 279 D+T+ +R QE L AN D++TGL NRN + + A+ A ++ + +V++DLDNFK Sbjct: 374 DVTQIKRYQEDLEHQANYDTLTGLANRNLLNERTQQALLQARRHDHFLSLVFIDLDNFKL 433 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRIL 338 VND+ GH GD+L+ +V + +C+ +AR GGDEF++L +N S S A + RI Sbjct: 434 VNDSMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFVLLLTNQSVSDSNAGVMQRIQ 493 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L P I E+ +CS+G+A PE G DS +++ +ADTAMY AK GR F +T E Sbjct: 494 AELIKPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYRAKSSGRNNFQFYTKE 553 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 MN E L L+++L AL+ND+L + YQP+I R G V +EAL+RWQ P+RGLI P+D Sbjct: 554 MNATSGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALIRWQHPKRGLIAPMD 613 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQV 516 FI AE +GLI+P+G WV+ R + + +G+ +RVA+N+SARQL+D+ +++ V Sbjct: 614 FIPMAECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSARQLSDRNFVESVQSV 673 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 ++ + + +++E+TES ++ N E + + +++G Q+ LDDFGTG+SSL+ L RFP Sbjct: 674 IEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDFGTGFSSLAYLKRFP 733 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 ID +K+DQ F+ + P + + I+A+A L ++VIAEGVE ++ +FL KNG +E Sbjct: 734 IDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKSEHLSFLKKNGCDEG 793 Query: 637 QGFLFAKPM 645 QG+ ++P+ Sbjct: 794 QGYFISRPL 802 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 169/438 (38%), Positives = 273/438 (62%), Gaps = 5/438 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKK 279 ++ E +R +E LR LA DS+T LPNR D + A+N H + NK+ V++LDLD+FKK Sbjct: 501 ELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLDLDHFKK 560 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM-ASRIL 338 VND GH GDQLL+ ++ L +AR GGDEF +L N +++ ++ A +I+ Sbjct: 561 VNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASIVADKII 620 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L P+ IG E + + S+GIAL P+ G+D+ +++++AD AMY AKE GR + +TP Sbjct: 621 DTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNYQFYTPT 680 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 MN + L+ NLR+AL+ + VI+YQP++ G++ +EAL+RWQ P+RG+I P + Sbjct: 681 MNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRGMISPAE 740 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQV 516 FI AEE+GLI+P+G W++ Q W+D+G + +RV VN+SARQ + + V Sbjct: 741 FIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLPQYISNV 800 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L++ +++E+TES +++ + + ++G + +DDFGTGYSSL+ L R P Sbjct: 801 LEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLNYLKRLP 860 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 ID +K+D+ F+ D++ + +++ AI+ + L ++V+AEGVE+ ++ FL + + Sbjct: 861 IDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQQQCDLM 920 Query: 637 QGFLFAKPMPAVAFERWY 654 QG+LF KP+P E+ Y Sbjct: 921 QGYLFTKPLPVRELEQKY 938 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 192/554 (34%), Positives = 315/554 (56%), Gaps = 13/554 (2%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A +V + AI+I D + N +G + +V+G++ L R +A Sbjct: 369 LRLAARVFDSSGEAILITDENVRVVAVNHSFVAMSGYRSEEVMGKNPRMLSSGRHDAEFY 428 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE----IFLICSGTDITE 225 R + G ++ E+W K R++ K++ + ++E + I D TE Sbjct: 429 RAMWDDINQHG-YWQGEIW-DKHKSGRIY---PKWMSITAVRDEHGKVVNYISIARDTTE 483 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDH--AINHADNNKVGVVYLDLDNFKKVNDA 283 + A++ + LA D +TGLPNR ++D + A+ H D ++ +++LDLD FK +ND+ Sbjct: 484 QTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDS 543 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRL 343 GH GD+LL+ V+L I C+ +AR GGDEF+VL +SA +A ++L L Sbjct: 544 MGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLREAGESAASVVAQKLLIALAT 603 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 P+ + + T S+GI++ P+ D+ +I++AD AMY AKE GR F F PEMN RV Sbjct: 604 PYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRNNFQFFVPEMNFRV 663 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYA 462 ++ +LR ALE +L + YQP+ G + +EAL+RW P +G + P +FI A Sbjct: 664 DLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVA 723 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELN 521 EE+G IV +G WV+ Q+A+WR G+ +L +AVN+S RQL + +K VL E Sbjct: 724 EETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETG 783 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 + +++E+TE ++ +++ A + + LG Q+ +DDFGTG+SSL+ L + P++ +K Sbjct: 784 LDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLK 843 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +DQ F+RDI +++R+I+++ LNL+VIAEGVE+ ++ FL G +E QG+ + Sbjct: 844 IDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFY 903 Query: 642 AKPMPAVAFERWYK 655 ++P+ A F R+ K Sbjct: 904 SRPLLAEDFMRFVK 917 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 338 bits (867), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 177/432 (40%), Positives = 266/432 (61%), Gaps = 3/432 (0%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVN 281 D+T A++RL A+ D++TGLPNRN + D I HAI + V++LDLD FK VN Sbjct: 256 DVTARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGRLTAVMFLDLDRFKLVN 315 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTR 340 D+YGH GD L+R+V+ + +CL +AR GGDEF+VL + + A +A+++ R Sbjct: 316 DSYGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDLASIEDAARLAAKLRDR 375 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 L RIG +E+ S S+G+AL+P G D ++++AD AMY AKE GR +C + PEM+ Sbjct: 376 LSESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAKERGRNNYCFYGPEMD 435 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFI 459 L +++ LR+AL +L HYQP++ G + EALVRW+ PER L+ P +FI Sbjct: 436 HHARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFI 495 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQVLQ 518 + AEE+GLIVPLG V+ RQ +WR+ G +L+VAVN+S Q + + +L Sbjct: 496 AVAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILA 555 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 E +++E+TES + + + +++ + + G + +DDFGTGYSSLS L RFPID Sbjct: 556 ETGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPID 615 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+D+ F++ I ++V+AI+A+A++L L ++AEGVE+ + FL G QG Sbjct: 616 TLKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQG 675 Query: 639 FLFAKPMPAVAF 650 FLF + MPA F Sbjct: 676 FLFGRAMPAEDF 687 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 338 bits (867), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 191/538 (35%), Positives = 307/538 (57%), Gaps = 8/538 (1%) Query: 116 VVSEAHSAIVILDSR-GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 ++ A AI++ DS G + NR E G+ +++IG+ + L + +A + + Sbjct: 163 LIEVASDAILVTDSETGTLVDCNRQAETLLGMSRNEIIGRHLCNLQQTGNDADGAETDLL 222 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 G +EL + G + + + G+ ++ + DIT+ R A++R++ Sbjct: 223 GHMLRGKTGTIELSLVRADGTTVPVEVSSSTFEMDGRR--YVHGAFRDITQRREAEDRIK 280 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQL 292 LA+ D +T LPNR + ++ AI A + N+V V+++DLDNFK++ND GH GD L Sbjct: 281 HLAHHDPLTNLPNRVFLHGRLEQAIELARREQNQVAVMFIDLDNFKRINDTLGHRIGDAL 340 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLV-LASNTSQSALEAMASRILTRLRLPFRIGLIE 351 L V+ + + QV+ R GGDEF+V + N + AMA RIL L P+ + + Sbjct: 341 LEQVAARLTENVPGSQVVGRLGGDEFIVVITGNRVSTTSAAMAERILESLCRPYTVEDYQ 400 Query: 352 VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDT 411 +++ S+GIA+ P G+ + +++HAD AMY AK GR F F+ +N+ V E L ++ Sbjct: 401 LHSGASIGIAIYPADGNSAETLMKHADAAMYHAKSRGRNTFEFFSQAINRGVRERLDIEN 460 Query: 412 NLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 LR AL++ +HYQP+I G + S+EAL+RW+ P G+I P FI AEE+ LI+P Sbjct: 461 GLRDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHPLLGVIAPDRFIPIAEETKLILP 520 Query: 471 LGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDV 529 LG WVI Q+ WR+ GI +R+AVN+S +QL D++ F AL +++ I++ Sbjct: 521 LGLWVIDRACHQLRAWRNDGIAGVRMAVNVSVKQLQDESFFEALGSIVERHGLSGSDIEL 580 Query: 530 ELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRD 589 E+TES ++EN ++++ G + +DDFGTGYSSL +L PI ++K+D+ FV D Sbjct: 581 EITESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYSSLGRLKLLPIQSLKIDRSFVHD 640 Query: 590 IHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 I + + I+A+ +L L++IAEGVE+ + L +G + QGFL AKP+PA Sbjct: 641 IETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNLLQNSGCDAIQGFLIAKPLPA 698 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 338 bits (867), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 194/562 (34%), Positives = 317/562 (56%), Gaps = 32/562 (5%) Query: 112 FAEQ-----VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 FAEQ ++ A++ D GNI N + E TG ++++ +G+ + + E Sbjct: 200 FAEQESARVTLNSIADAVISADLSGNITFLNSVAEKLTGWQQNEALGRPIADILKVVDEI 259 Query: 167 AASRRNNRV-----FFRSGNAYEVELWI-------PTCKGQRLFLFRNKFVHSGSGKNEI 214 R + V RS A + + P + + L R + +G + Sbjct: 260 TREPRGSTVERPNQLHRSTKAPSNSILVRRDGSELPIDESRAPILDRQGQI---AGTVTV 316 Query: 215 FLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYL 272 D++ R + ++ LA D +T LPNR + D + AI+ A ++ V+++ Sbjct: 317 L-----HDVSVTRAMELKMAHLAQHDFLTDLPNRRVLDDRLRQAISLARRQGKQLAVLFV 371 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL-ASNTSQSALE 331 D+D FK +ND+ GH GD+ L+ ++ + +C+ +AR GGDEF++L A T+ Sbjct: 372 DIDRFKHINDSLGHGMGDKALQSMAERLTTCVRASDTVARQGGDEFVILLAEVTTADDAA 431 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A +IL+ + LP RIG E+ S S+GI+ P D+ +I+HAD AMY AKE GR Sbjct: 432 IVAKKILSAVALPHRIGRHELQISASIGISTCPNDADDAETLIKHADIAMYQAKEKGRNN 491 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPER 450 + F +MN+RV + L+++LR ALE + ++HYQPK+ G + +EAL+RW+ PE Sbjct: 492 YQFFRADMNERVLQRQSLESSLRLALERQEFLLHYQPKMNLETGHITGMEALIRWRHPEL 551 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTI 509 GL+PP FI AE+ GL+ P+GRWV+ + RQV +W G+N + VAVN+SA + + Sbjct: 552 GLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMVAGLNPVPVAVNVSAVEFRRKHF 611 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 F + L+E + + +++ELTE+ L++ E ++V+ G ++ +DDFGTGYSSL Sbjct: 612 FDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVLHALKSAGVKLAIDDFGTGYSSL 671 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L R P+D +K+D+ FV D+ + + ++V AI+ + ++LNL VIAEGVE+ ++ A L Sbjct: 672 SYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMGKSLNLNVIAEGVETQEQLALLR 731 Query: 630 KNGINERQGFLFAKP--MPAVA 649 + E QG+ F++P +PAVA Sbjct: 732 SHCCAEGQGYYFSRPVSVPAVA 753 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 192/560 (34%), Positives = 314/560 (56%), Gaps = 36/560 (6%) Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK-EHDVIGQSVFKLF----MSRREAAA 168 E +++ A I LD GNI N G ++++IG+ +F +++ A Sbjct: 383 ELILNSAGEGIFGLDLDGNITFCNPAGASMLGYDIKNELIGKPSSMVFNGIEKGKKKQVA 442 Query: 169 S---------RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 S + + F + +++ VE I + K G + + + Sbjct: 443 SGCDEDWNLYDKTEQFFRKDQSSFPVEYVISSIK---------------EGTEIVGEVIT 487 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNF 277 D+T+ ++ +E ++ A DS+T LPNR ++D + + +A K+ V+YLDLD F Sbjct: 488 FKDVTQRKQMEEEIKYHAYFDSLTDLPNRVLLKDRLTQGLTYAQLHAEKLAVLYLDLDRF 547 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASR 336 K VND GH FGD LLR+V+ + +C+ ++R GGDEF + N S+ + + +R Sbjct: 548 KFVNDTLGHSFGDLLLREVANRLSACVPKSATVSRQGGDEFTIYLPNIKSEKEVLKVVNR 607 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 ++ PF + E+Y S+GI++ P++G + ++++ADTAMY +KE + F+ Sbjct: 608 VIDSFSRPFHLVDNEIYMKTSIGISIFPDNGDTTEILVKNADTAMYKSKEISGSSYHFFS 667 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPP 455 M+ R FE + L+ +L KALE ++LVI+YQP+I + ++ +EAL+RW E G+IPP Sbjct: 668 EGMDTRTFESIKLENDLYKALEQEELVIYYQPQINGKTNKIEGVEALIRWNHQEHGMIPP 727 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALK 514 FI AEE+GLIVP+G WV+ + RQ+ KW D+G L ++VN+SARQL +F +K Sbjct: 728 DKFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQGSPLISMSVNLSARQLEQSDLFAMVK 787 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 VL+E+ I +ELTE+ ++ N E L +++ LG + +DDFGTGYSSL L + Sbjct: 788 NVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLKGLGINLAIDDFGTGYSSLGYLKK 847 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 PI +K+D+ FV+D+ K ++ I+ +A+ LNL VIAEGVE+ ++ FL+ Sbjct: 848 LPISTLKIDKSFVQDMTKD--DAAITNTIITLAKNLNLDVIAEGVETKEQVEFLSARNCY 905 Query: 635 ERQGFLFAKPMPAVAFERWY 654 QG+ F++PM A E+ + Sbjct: 906 LMQGYFFSRPMAAEDIEKLF 925 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 183/446 (41%), Positives = 275/446 (61%), Gaps = 8/446 (1%) Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--D 263 H G + + + DITE R+ QE L AN D++TGL NRN +++ + AI+ A Sbjct: 361 HGGEPR---YFVGVQKDITEIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRH 417 Query: 264 NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLA 322 N V ++D+DNFK+VND+ GH GD+L+R + + SCL +AR GGDEF L+L Sbjct: 418 NWTFSVAFIDIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLT 477 Query: 323 SNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 S + ++ + RI + PF I ++ +CS+G+A P G ++ ++ +AD+AMY Sbjct: 478 SQSLDESIHTVVQRIRNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMY 537 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEA 441 AK G F + EMN + L L+ +L ALEN QLV+HYQP++ R ++ +EA Sbjct: 538 QAKASGSNNFRFYAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEA 597 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNIS 500 L+RWQ P+ G+IPPL FI +E+ GLIVP+G WV+ Q + + G +RVAVN+S Sbjct: 598 LIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLS 657 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 RQL + + +++ LQ + +++E+TES L+ N E ++ + + S LG Q+ LD Sbjct: 658 VRQLEQKDLVHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLD 717 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFGTGYSSLS L R PI+ +K+D+ F+ DI + R+I+A+A +L +QVIAEGVE Sbjct: 718 DFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVE 777 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMP 646 SA + AFL +NG +E QG+L ++P P Sbjct: 778 SADQYAFLLENGCDEVQGYLLSRPRP 803 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 198/558 (35%), Positives = 316/558 (56%), Gaps = 31/558 (5%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L+ QV + AI+I DS I NR TG +V+G++ KL AS Sbjct: 190 LNLIAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYSADEVLGRNP-KLL-------AS 241 Query: 170 RRNNRVFFRS-------GNAYEVELWIPTCKGQ------RLFLFRNKFVHSGSGKNEIFL 216 R++R F+R ++ E+ G+ + RN+ SG +N I + Sbjct: 242 GRHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNE---SGGIENCIAI 298 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDL 274 +IT++R A R++ LA+ D +T LPNR +QD + + HA + + V++LDL Sbjct: 299 YA---EITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDL 355 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-M 333 D FK +ND+ GHL GD LL++V+ + + + D +AR GGDEF+V+ + + A + Sbjct: 356 DRFKTINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHV 415 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 A +I+ + + + S S+GI++ P+ D +IR+AD AMY +K GR QF Sbjct: 416 AGKIIEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQFQ 475 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLI 453 FT +MN E L L+ +L +A+E + + +QP+ G + EAL+RWQ P+RGL+ Sbjct: 476 FFTADMNAHALERLALENDLHRAVERGEFRLMFQPQFEGSGSIIGAEALLRWQHPQRGLV 535 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTA 512 P +FI AEE+GLIVP+G WV+ +QV WRD G+ + V+VNISA Q + + + Sbjct: 536 TPAEFIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLEL 595 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 ++++L N E +++ELTES L+ + ++ + ++G ++ +DDFGTGYSSLS L Sbjct: 596 IRRLLAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYL 655 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 FPI +K+DQ FVRD+ + ++ AI+ +A+ LN++VIAEGVE+A++ +FL Sbjct: 656 RSFPISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQC 715 Query: 633 INERQGFLFAKPMPAVAF 650 +E QG F++P+ F Sbjct: 716 CDEFQGHFFSQPVSPEKF 733 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 186/541 (34%), Positives = 310/541 (57%), Gaps = 9/541 (1%) Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF--FRSGN 181 + I++ G ++ NR GL + + S + E A R F R Sbjct: 281 VAIIEGDGRLRYLNRAGRAVLGLTATEDV--SSRHIAQCHPEWATHRLLMEAFPTARRDG 338 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 A++ E+ G+ + + + H G+ + F DITE + ++ LR A D+ Sbjct: 339 AWQGEIAARLADGREIPVSQVVLAHGGANEMPEFFSTIARDITERKHFEQELRRQATHDA 398 Query: 242 ITGLPNRNAMQDLIDHAINH-ADNNKVG-VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +TGLPNR ++D I+ + H A ++K+ V++LD+DNFK++N++ GH GD +LR + Sbjct: 399 LTGLPNRILLEDQIEAVVAHSARSHKLASVLFLDIDNFKRINESLGHAAGDAMLRHAAQR 458 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSV 358 + C+ V+AR GGDEF ++ + S + A+ ++ P I EVY S SV Sbjct: 459 LRDCVRPTDVVARYGGDEFTIVLGDLSHVDNIPAILHKVRAAFETPLVISGQEVYASFSV 518 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 G+++ P G D ++++ADTAMY +K GR ++ + PEMN R E L L+T+LR+AL+ Sbjct: 519 GVSVYPHDGDDGATLLKNADTAMYRSKASGRNRYQFYAPEMNARGQELLSLETDLRRALD 578 Query: 419 NDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 + +HYQP++ R + +EAL+RW+ P G+I P DF+ E++GLIVP+G WV+ Sbjct: 579 RGEFRLHYQPQLDLRDNRIAGVEALLRWKHPRDGVIAPGDFVPLLEDTGLIVPVGEWVLR 638 Query: 478 DVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 + Q R+ G+ +R++VN+SARQ + T+ ++QVL+E +++E+TES Sbjct: 639 NACTQYRACRESGVAPVRISVNVSARQFREDTLLRQVEQVLREECMPPHHLELEITESTA 698 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 +++ ++ LG ++ +DDFGTGYSSL+ L RFP+DA+K+DQ F+RD + Sbjct: 699 MQDVAATGDILAALDALGVRLAIDDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANI 758 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 ++ A +++ L L+V+AEGVE+A++ AFL + + QGF F++P+PA A + R Sbjct: 759 AAIAEASISLGHKLGLEVVAEGVETAEQLAFLRRRACDLIQGFHFSRPLPADALTPFLAR 818 Query: 657 Y 657 + Sbjct: 819 H 819 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 337 bits (865), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 202/546 (36%), Positives = 311/546 (56%), Gaps = 10/546 (1%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 A V A I ILD + NR TG +V+G++V L SR E + Sbjct: 405 LAATVFEAASEGIFILDPDYRVLAVNRAFSAVTGYSREEVVGRTVTSLIGSR-EMRRQYQ 463 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLF--LFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 R +++ EL I T K L+ + V SG+ ++ D+T R A Sbjct: 464 MIRQELDGSGSWQGEL-IETRKSGELYPQWLQLNLVRDASGRPS-HIVGFFADLTARREA 521 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHL 287 +ERLR L++ D +TGL NR+ ++ + A A + +V++DLD FK +ND+ GH Sbjct: 522 EERLRYLSHYDELTGLANRSLFKERLHEASQRARQSGRSIALVHIDLDRFKLLNDSLGHE 581 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMASRILTRLRLPFR 346 DQLLR +S + + +AR GDEF ++L + S S+L +ASR+L +LRLP Sbjct: 582 VADQLLRQMSRRLTQAVPEADCIARLSGDEFAILLDAYGSLSSLARVASRLLAKLRLPMD 641 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 +G E+ S S+GI+L P++ + A+I A+ A+ AK G F FT + E Sbjct: 642 VGGHELVVSASLGISLLPDYAREIGALISQANMAVQHAKHLGGNTFQFFTDNLQACTLER 701 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEES 465 L L+ LRKA+E QL + YQPK+ ++ + EALVRW+ P++GL+ P +FI AEE+ Sbjct: 702 LQLENQLRKAIEEGQLEVFYQPKLNLADDQLNAAEALVRWRHPQQGLVAPGEFIGLAEET 761 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEY 524 GLI P+G +V+ RQ +W+ +G+ +RV+VNIS QL + + ++QVL+E Sbjct: 762 GLIAPIGEFVLRQACRQARQWQQQGLAEIRVSVNISVYQLRQGNLTSLVRQVLEETGLAP 821 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 +++ELTES L++N + + +Q +LG ++ +DDFGTGYSSLS L RFP+ +K+DQ Sbjct: 822 QYLELELTESQLLDNVDSVVVTFRQLRELGVKLAIDDFGTGYSSLSYLKRFPVHYVKIDQ 881 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 F+RD+ ++ RAI+A+A +L L+V+AEGVE+ + FL +E QG+L ++P Sbjct: 882 TFIRDLSPGGEDAAITRAIIAMAHSLELKVVAEGVETQAQMDFLKSQNCDEIQGYLISRP 941 Query: 645 MPAVAF 650 + A AF Sbjct: 942 VEAAAF 947 >UniRef50_A4TX60 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TX60_9PROT Length = 961 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 182/447 (40%), Positives = 275/447 (61%), Gaps = 6/447 (1%) Query: 210 GKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKV 267 G+N + ++ DITE + AQ+RL +A+ D +T LPNR +QD +D AI A+ +V Sbjct: 509 GQNRLLVVVR--DITERKNAQDRLEFMAHHDPLTELPNRLLLQDRVDRAIALAEREGRRV 566 Query: 268 GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTS 326 +++LDLD FK VND+ GH GD+LL+DV+ + C+ +AR GGDEF +VL + Sbjct: 567 ALMFLDLDQFKTVNDSLGHAAGDRLLKDVAWRLRQCVRESDTIARLGGDEFVIVLNAVRD 626 Query: 327 QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKE 386 + +A +I + P I EV ++ S+GIA+ PE G D +++ AD AMY AKE Sbjct: 627 ADGVVEVAEKIHKSVAPPITIEGQEVTSTLSMGIAMFPEDGHDFDTLMKKADAAMYHAKE 686 Query: 387 GGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRW 445 GR + F MN +L L + L +ALE + +++QP+++ G V EAL+RW Sbjct: 687 SGRSTYRFFAARMNADAVAHLALRSGLHRALERGEFQLYFQPQVSLTGGAVVGAEALIRW 746 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLA 505 PERGL+ P +FI AE+SGLIVP+G WV+ RQ A W+ G L +AVN+SA Q Sbjct: 747 NHPERGLVSPAEFIPVAEDSGLIVPMGDWVLRQACRQAALWQAGGHALTMAVNLSALQFR 806 Query: 506 DQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTG 565 + A+++ L+E +++ELTES +I++ E + + ++ LG Q+ +DDFGTG Sbjct: 807 RGDLERAVREALEESGLAPHSLELELTESIMIQDHEAVMDMTRRLGALGVQLSIDDFGTG 866 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YSS++ L RF +D +K+DQ FVRD+H + ++ +AI+ +A +L L+VIAEGVE + Sbjct: 867 YSSMAYLKRFAVDKLKIDQSFVRDVHTDTDNAAITQAIIQMAHSLKLEVIAEGVEVTEVV 926 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFER 652 FL +G + QGFL+ +PM A FE+ Sbjct: 927 EFLRDHGCDLAQGFLYGRPMTAQRFEK 953 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 208/590 (35%), Positives = 327/590 (55%), Gaps = 43/590 (7%) Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL 127 LT+ + ++ ++ +W+ +AS TP + DL L++A Q L Sbjct: 488 LTISRDVTEIKKTQQQFHQAKWSIDASL---TPMLMADLQGRLTYANQAA---------L 535 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 D G L ++ +E + + ++ +R R R ++GN ++VEL Sbjct: 536 DLWGYAGEEEVLGKNIVEFQEDPQRTRIIMEILKAR---GVWRGEGRGKQKNGNGFDVEL 592 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPN 247 K Q + ++ S DIT++R+ + +++ LA DS+TGLPN Sbjct: 593 QAQVVKDQ--------------NGGPLSILASAIDITDKRKTELQIKKLAYFDSLTGLPN 638 Query: 248 RNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLE 305 R ++D ++ A+ A N V V+ LDLDNFK +ND GH GD L+R V+ + + Sbjct: 639 RTLLKDHMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECR 698 Query: 306 HDQVLARPGGDEFLVLASN-----TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 LAR GGDEF++L ++ + SA E + + R PF ++ T+ S+GI Sbjct: 699 TCDTLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTER---PFATSECDINTTASIGI 755 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 AL P+ G D +++ ADTAMY AK+ GR + F+ ++ ++ ++ NLR AL+ Sbjct: 756 ALYPQDGQDPETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEG 815 Query: 421 QLVIHYQPKITWRGEVR--SLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 ++ + YQP+I G+VR +EAL+RWQSPE G I P FI AEE+GLI PLG WV+ Sbjct: 816 EMQLVYQPQIDL-GKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQ 874 Query: 479 VVRQVAKW-RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 RQ A W + + L VAVN+SA+Q + +K++L+E +++E+TES + Sbjct: 875 ACRQGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFL 934 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 EN E A+ + + +LG Q +DDFGTGYSSLS L + PID IK+ Q FVRDI + Sbjct: 935 ENMEAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDK 994 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 ++++A +A+A++L +++IAEGVE+ ++ AFL +G + QG+ FAKPMPA Sbjct: 995 AIIKATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPA 1044 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 197/543 (36%), Positives = 300/543 (55%), Gaps = 6/543 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L QV A ++I D+RG I NR E TG +V+G++ L R++ A Sbjct: 522 LRLHAQVFDTATEGVMIADARGRILSVNRAFEQVTGYSAEEVVGRNPSILSSGRQDKAFY 581 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 RR G + E+W G+ + +G + +DIT ++R+ Sbjct: 582 RRMWDTIKGEG-IWSGEIWNRRKDGEIYPEWLTISSIAGPNGEASHFVAVFSDITAQKRS 640 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHL 287 ++ + LAN D +TGL NRN +D + HAI+ A N VG++ +DLD F+ +ND GH Sbjct: 641 EQEIDFLANHDPLTGLANRNLFEDRLAHAISMAGRNGQHVGLLLVDLDRFRLINDGMGHG 700 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM-ASRILTRLRLPFR 346 GD LLR+ + C+ +AR GGDEF ++ + +A M A RIL +R P R Sbjct: 701 PGDALLRETGRRLGHCVRDSDTVARLGGDEFGIILEGLADAADAGMQAERILEAMRAPLR 760 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 +G E++ + S+GIA+ P G+D+ ++RHADTAM AK GR F +T + + VF Sbjct: 761 LGGQELFCTVSIGIAVFPADGTDAATLLRHADTAMALAKREGRNNFQFYTHALTEAVFSR 820 Query: 407 LWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEES 465 L ++T LR ALE D+L +HYQP + G + ++E+L+RWQ PERGL+ P FI AE+S Sbjct: 821 LNIETGLRHALERDELRLHYQPILDAASGRIAAMESLMRWQHPERGLVSPGVFIPVAEQS 880 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEY 524 LI+ LGRW ++ QV W D G+ + V+VNI A + V++E + Sbjct: 881 DLILALGRWALVSACAQVRAWSDAGLEPVPVSVNIPACHFRQPGFVEEVLGVVRETGVQP 940 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 + +ELTES L+E LA I++ G V +DDFGTGYSSL L RF ++ +K+D+ Sbjct: 941 QSLIIELTESALMEPVSLAEERIRRLRDTGVVVAIDDFGTGYSSLGYLQRFHVNYLKVDR 1000 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 FV + ++++ A++ V+ +L LQV+AEGVE+ + L G ++ QG+L +P Sbjct: 1001 SFVSGLPGDENARAITEAVIGVSHSLGLQVVAEGVETQAQLDHLRATGCDKVQGYLTGRP 1060 Query: 645 MPA 647 + A Sbjct: 1061 VTA 1063 >UniRef50_B6BGL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGL3_9PROT Length = 671 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 164/431 (38%), Positives = 276/431 (64%), Gaps = 4/431 (0%) Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAY 284 +ER+A+ L AN DS+TGLPNR+A D I +N NN ++++DLDNFK +ND+ Sbjct: 235 KERKARYELEYFANHDSLTGLPNRHAYIDKITSMVNKNKNN-FALIFMDLDNFKTINDSL 293 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRL 343 GH GD LL+ V+ + + ++ +L+R GGDEF+ L SN S+ +E +I L+ Sbjct: 294 GHTLGDMLLQKVAKRLKNEIKEYDMLSRFGGDEFVFLFSNVQSELTIEKTMIKIHEVLKK 353 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 PF + EVYT+ S+GIA+ P+ D+ ++R+AD AMY AK+ GR ++ F +M Sbjct: 354 PFILNTYEVYTTASIGIAIYPDDAQDAELLLRNADVAMYDAKQSGRSKYSFFNADMLNLS 413 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDFISYA 462 L L++ L KALEN++L + +QP+++ W ++ +EAL+RWQ P +GLI PLDFI A Sbjct: 414 SNRLMLESELHKALENNELFLLFQPQVSLWNEKIVGVEALIRWQHPTKGLISPLDFIPIA 473 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELN 521 E SGLI+P+G W+I Q+A W+D ++ +++N+SA+Q+ Q +++ ++ ++ Sbjct: 474 ENSGLIMPIGEWIIDQACDQLALWKDTHMSEATLSINVSAKQVLHQDLYSYIEAAIERTK 533 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 + +++E+TES ++EN + ++ + +LG + +DDFGTGYSSLS L + PID +K Sbjct: 534 IDGRFLELEITESVIMENINETVRILSRLKKLGVSIAIDDFGTGYSSLSYLKKLPIDKLK 593 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ F++DI ++ AI++++++L+L+++AEG E+ + FL + + QGF + Sbjct: 594 IDREFIKDIPNDKDDIAITNAIISMSKSLSLKIVAEGPETKEHIEFLQNSKCDIAQGFYY 653 Query: 642 AKPMPAVAFER 652 +KP+ V E+ Sbjct: 654 SKPITIVEVEK 664 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 336 bits (862), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 172/433 (39%), Positives = 267/433 (61%), Gaps = 6/433 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKK 279 D+TE + Q +L D++TGLPNRN + D I AI +A N + DLDNFK Sbjct: 497 DVTESIQYQAQLEYKTKYDNLTGLPNRNLLNDRIQQAIAYAARRNKGFALAVFDLDNFKY 556 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA-SNTSQSALEAMASRIL 338 +ND+ GH GDQLL +V+ ++ SCL LAR GGDEF++L L M +RI Sbjct: 557 INDSMGHETGDQLLTEVAESLRSCLREGDTLARLGGDEFVILMHKEECDRPLGLMLNRIQ 616 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 + P R+ E+ + S+G+ PE G D++ ++++ADTAMY AKE GR + C +T E Sbjct: 617 QLVSQPRRLKDKEILVTPSIGVCQFPEDGEDASTLLKNADTAMYKAKERGRNRICSYTQE 676 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLD 457 MN+ + + + ++ +LR+ +EN +L ++YQP++ G LEALVRW+ +R ++PPL+ Sbjct: 677 MNESIQKRVQMEQDLRRGIENGELELYYQPQLDPHGGGAVGLEALVRWRKGDR-MVPPLE 735 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQV 516 FI AEE+GLI + WV+ Q+ WRD+ + V+VN+S RQ D +++V Sbjct: 736 FIPIAEETGLITEVDAWVLRAACLQLKMWRDQKQQMVPVSVNLSPRQFQDAYCVELVRKV 795 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 LQE N E + +E+TES ++ N E AL + Q +G Q+ +DDFGTGYSSLS L FP Sbjct: 796 LQESNIEPGCLKIEVTESMVMHNAEEALRTMTQLKAMGVQLSMDDFGTGYSSLSYLKMFP 855 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 D +K+D+ FVR++ P +++RAI+ + + L ++++AEGVE+ ++ +FL + G + Sbjct: 856 FDQLKIDKSFVRNVTNDPQEAAIIRAIIGLGKTLGIKIVAEGVETVEQYSFLVRAGCDLI 915 Query: 637 QGFLFAKPMPAVA 649 QG+ ++ P+P A Sbjct: 916 QGYFYSPPLPVAA 928 >UniRef50_Q74BV5 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74BV5_GEOSL Length = 660 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 194/500 (38%), Positives = 292/500 (58%), Gaps = 20/500 (4%) Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 FR+G Y ++ I G + ++ + S L+ + DITE A+ER+R L Sbjct: 161 FRTGVGYCMDHRIVLDDGVERIVSQHAELLSADDGRTSRLVGTVHDITERTLAEERIRYL 220 Query: 237 ANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLR 294 A+ D++T LPNR ++ ++ A+ A N + V++LDLD+FKKVND GH GD+LL+ Sbjct: 221 AHHDTLTALPNRFQFEERMEQALAFAQRNGFMMAVLFLDLDHFKKVNDTLGHHAGDRLLQ 280 Query: 295 DVSLAILSCLEHDQVL------------ARPGGDEFLVLASNTSQSALEAMAS-RILTRL 341 + + ++ CL L +R GGDEF +L ++ + A S RI+T L Sbjct: 281 EAAGRLMKCLRRSDTLTHASREDASPFISRMGGDEFTILLTDLAHPQDAARVSQRIITAL 340 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 + IG EV+ S+GI+L P G D ++R+ADTAMY AKE GR + ++ MN Sbjct: 341 SKRYVIGGHEVFVGASIGISLFPSDGEDCDQLLRNADTAMYHAKELGRNTYQYYSGSMNA 400 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFIS 460 E L L+ NLR AL+ ++ + YQP++ G V +EAL+ W P ++PP DFI Sbjct: 401 MALERLTLENNLRWALKRNEFRLCYQPQLDAASGRVVGMEALLSWHRPGCDVVPPDDFIP 460 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQE 519 AEE+GLI +G WV+ + Q W +G+ +RVAVN+S+ Q + + +++VL+ Sbjct: 461 LAEETGLIASIGEWVLWNACAQAVTWLHEGLPPVRVAVNLSSLQFRSRRLAELVRKVLRA 520 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 +++E+TE + N+E A VI+ ++G + +DDFGTGYSSLS+L+RFP+DA Sbjct: 521 TGLPPSHLELEITEGVFMSNEEDAAVVIRDLKKMGVRFSVDDFGTGYSSLSRLSRFPLDA 580 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ FVRDI P + L AI+A+A+ L L VIAEGVE+ ++ AFL NG E QGF Sbjct: 581 LKIDRSFVRDISADPAAAGLTAAIIAMARNLGLNVIAEGVETHEQFAFLRANGCAEVQGF 640 Query: 640 LFAKPM---PAVAFERWYKR 656 LF++P+ A AF R R Sbjct: 641 LFSQPLNPDAAAAFLRARSR 660 >UniRef50_UPI0001698B39 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B39 Length = 622 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 170/427 (39%), Positives = 277/427 (64%), Gaps = 5/427 (1%) Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGV--VYLDLDNFKKVNDAYGH 286 +QER + LA D++TGLPNR D ++HA+N A+ +K+G+ ++LDLD FK++NDA+GH Sbjct: 190 SQERYQQLAQHDTLTGLPNRLLFHDRLNHALNRANRSKIGLALLFLDLDRFKQINDAFGH 249 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPF 345 GD+LL V+ +L L + +AR GGDEF+V+ + + +A ++L + Sbjct: 250 PMGDRLLALVAKDLLEALREEDTIARLGGDEFVVILEGVHGRDHVINVAEKLLAVIGRER 309 Query: 346 RIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 + ++++ S+GI+L PE G D T ++R+AD AMY AK GR + +TP + + + Sbjct: 310 SLDSLQMHIGVSIGISLYPEDGEDVTTLVRNADAAMYQAKAKGRNGYAFYTPMLTEVLEA 369 Query: 406 YLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 L+ +R+A+E +Q ++ YQP++ G++ +E L+RWQ PE GL+ P FIS AEE Sbjct: 370 SFELERAMRQAVEQEQFLLLYQPQVDVESGDIVGVEVLLRWQHPELGLMLPEQFISLAEE 429 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFE 523 SGLI+PLGRW++ ++Q ++W+ G+ +R+++NIS QLAD + L ++L + + Sbjct: 430 SGLILPLGRWLVRQALQQASQWQLDGLRPVRLSINISNHQLADVQFASELGELLGQFGLD 489 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 I++E+TE+ EN E+ + ++ LG Q+ +DDFGTGYSSLS L +FP+D +K+D Sbjct: 490 PGLIELEVTENSCAENLEILIEHLESIKALGVQIAIDDFGTGYSSLSYLKQFPVDTLKVD 549 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 + F+ D+ +Q++VRA++ + ++L LQVI+EGVE + E A+L G + QGFL ++ Sbjct: 550 RTFIHDLIGSMENQAIVRAMIVLGRSLGLQVISEGVEQSAELAWLRAEGCDTYQGFLHSQ 609 Query: 644 PMPAVAF 650 PM A AF Sbjct: 610 PMSAEAF 616 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 190/543 (34%), Positives = 311/543 (57%), Gaps = 9/543 (1%) Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 V ++ ++IVI D G I+ N + TG +V+GQ+ ++ S + + + Sbjct: 402 VEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVLGQNP-RILKSGKTPQTTFKEMWAH 460 Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKF--VHSGSGKNEIFLICSGTDITEERRAQERLR 234 G+ + E+ I K + +++ V GK + + DITE+++A+ Sbjct: 461 LTRGDIWHGEI-INRRKDKSIYIESATITPVKQADGKITNY-VAIKEDITEKKKAEAYTE 518 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQL 292 LA D +TGLPNR +Q + + +N A +N + V++LDLDNFK +ND+ GH GDQ+ Sbjct: 519 NLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQV 578 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEV 352 L ++ I + ++R GGDEF++L NT +A +A+ ++ + + E+ Sbjct: 579 LIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAAMHIATTLIQEISKASVVEHNEL 638 Query: 353 YTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTN 412 + S+GIA+ P G+D ++++A+TAMY K R F TPEM L L+ Sbjct: 639 TITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLSASRNLQLENA 698 Query: 413 LRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPL 471 LR AL+ ++L ++YQP+I T G++ EAL+RW PE G+I P +FI AE SG I+ + Sbjct: 699 LRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEI 758 Query: 472 GRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVE 530 G WV+ +RQ W D G + +AVN+S Q + + T + +L E+ +++E Sbjct: 759 GEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELE 818 Query: 531 LTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI 590 LTE+ + + E ++V+ F + G ++ +DDFGTGYSSLS L +F + +K+DQ F+RDI Sbjct: 819 LTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDI 878 Query: 591 HKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 P +++V AI+ +A L LQ IAEGVE+A++ AFL +G +E QG+ F+KP+P+V F Sbjct: 879 SNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVEF 938 Query: 651 ERW 653 E++ Sbjct: 939 EQF 941 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 335 bits (860), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 174/448 (38%), Positives = 271/448 (60%), Gaps = 6/448 (1%) Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGV 269 N ++ + DIT + A+ER+R LA DS+TGL NR D +D + + ++ + Sbjct: 227 NPLYTVPVIQDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMARSRRRQSRFAL 286 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA 329 ++LDLD FK VND GH GD +LR + + CL + +AR GGDEF+++ S+ + A Sbjct: 287 MFLDLDRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEFVIILSDYKEDA 346 Query: 330 -LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 L +A +IL L PF +G+ EVY+S SVGIA+ P+ G ++T ++RHAD AMY AKE G Sbjct: 347 NLPRVADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHADMAMYAAKESG 406 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQS 447 F ++ EMN R + ++ NLR+ALE ++ I YQP+I +V +EAL+RWQ Sbjct: 407 GDTFRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKVAGVEALLRWQH 466 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLAD 506 P+ G+IPP FI AEE+ LI+PLG WV+ V Q W+ +G + RV +N+S RQ Sbjct: 467 PQLGVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRVGINVSGRQFVQ 526 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 + ++L E ++ E+TES ++++ + A+ ++ +LG + +DDFGTGY Sbjct: 527 PDFVDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGINMAIDDFGTGY 586 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSLS L P++ +K+D+ F+ D+ +++V A +A+A+ L L V AEGVE+ + Sbjct: 587 SSLSCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVTAEGVETEGQYG 646 Query: 627 FLTKNGINERQGFLFAKPM-PAVAFERW 653 F+ K +E QGF F++P+ P+ + W Sbjct: 647 FVQKRECDEVQGFYFSRPLSPSEVADAW 674 >UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GYS2_SHEPA Length = 1072 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 193/534 (36%), Positives = 304/534 (56%), Gaps = 11/534 (2%) Query: 121 HSA--IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 HSA I++ D+ +I+ N TG DV G+S L + + ++ R Sbjct: 514 HSAEGIIVTDANNHIELVNPAFTKITGYTLDDVKGKSPSILSSAHHQEDFYQQLWRSL-S 572 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE-IFLICSGTDITEERRAQERLRILA 237 S N++E E+W KG +++ K + KN+ I I DI+ ++ ++ + Sbjct: 573 SKNSWEGEIW-NKRKGGKIYPEYLKITAVKNSKNKTIQHIGLFLDISNNKQYEQDIWYKT 631 Query: 238 NTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRD 295 N DS+T LPNR+ + AI+ H N++V + ++DLD FK +N+ +GH G+++L+ Sbjct: 632 NFDSLTKLPNRHLFSSRLQQAIDSAHNTNSQVAIFFIDLDRFKFINELHGHAAGNKVLKQ 691 Query: 296 VSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTS 355 + + + L D +AR GGDEF+V++ T E +A ++ L P+ E S Sbjct: 692 SATRLEAVLGPDDSIARIGGDEFVVISPQTGNVGAEQLAQKLSDTLAKPYLFDNKETIIS 751 Query: 356 CSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRK 415 S GIA PE G D ++ +++TAMY AK GR + F+PEMN + E + L+ LRK Sbjct: 752 SSFGIAFYPEDGQDIEMLLHNSETAMYQAKRDGRAHYQYFSPEMNVEMLERMHLEQRLRK 811 Query: 416 ALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRW 474 A++ + + YQP I GEV S+EALVRWQ P+ G+I P FI AEE+GLI PLG W Sbjct: 812 AVKQSEFYLEYQPVIDMHSGEVTSVEALVRWQDPDYGVISPQAFIPIAEEAGLIEPLGEW 871 Query: 475 VILDVVRQVAKWRDKGINLRVAVNISARQLA---DQTIFTALKQVLQELNFEYCPIDVEL 531 ++ + +A+W +G+ L++A+N+SARQ D + F LKQ L + + + +E+ Sbjct: 872 ILQQALSDLAQWHAQGLMLKMAINVSARQCIHSRDISFFDILKQTLAKHDIAAENLHIEI 931 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TES LIE+ L ++ QLG ++LDDFGTGYS+LS L + PI IK+D+ F+ + Sbjct: 932 TESMLIEDKPQCLQTLESIKQLGVDIYLDDFGTGYSALSYLTQCPISVIKIDKSFIDNAL 991 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 P L++AIV +AQ+L + ++AEGVE+ ++ FL G + QG+L +KP+ Sbjct: 992 DNPSDAKLIKAIVMMAQSLEMPLVAEGVETVEQWHFLRNLGCDYAQGYLMSKPL 1045 >UniRef50_D2LQL8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQL8_BACS4 Length = 1016 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 178/449 (39%), Positives = 292/449 (65%), Gaps = 15/449 (3%) Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVY 271 I +I S T+I+E+++ ++++ LA D +TGLPNR ++ ++ A+ AD N K+G++ Sbjct: 559 IRIIGSITNISEKKQQEKQIMHLAFHDGLTGLPNRRLLRSRLELAMTDADRYNYKLGLLL 618 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVS----LAILSCLEHDQ------VLARPGGDEFLVL 321 +DLD FK +ND GH GD+L++ V+ L + S H + +AR GGDEF++L Sbjct: 619 IDLDRFKVINDTLGHQAGDELIQKVADVLELTMRSPDTHSRAKQEHTTVARLGGDEFIIL 678 Query: 322 ASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 ++ T S L+A A+ I+ + + PF I +V+TS S+GI++ P+HG D ++ +AD A Sbjct: 679 LTHITDVSDLQASANLIIEKFKEPFFIQNQDVFTSASIGISVYPDHGRDYDSLTGNADIA 738 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSL 439 MY AKE G+ Q +++ E+N E ++ LRKALE ++ V+HYQP+ EV + Sbjct: 739 MYRAKENGKNQMEMYSSEINTLTMERFQMENQLRKALEREEFVLHYQPQFHLENNEVLGI 798 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVN 498 EAL+RW S +RG++ P++FI AEE+GLI+P+G WV+ + RQ +W D+G + V+VN Sbjct: 799 EALLRWNSSDRGIVSPMEFIPLAEETGLIIPIGYWVLKEACRQNKRWMDQGHRPKIVSVN 858 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 ISARQL ++ A+K +L++ + +E+TES I+N +++++++++ +LG ++ Sbjct: 859 ISARQLQEKDFVQAVKSILEDTQLPTQYLCLEITESTAIKNIDISMNMLKELGELGIKIA 918 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 +DDFGTGYSSL+ L + PI IK+D+ F+RD+ ++VRAI+A+A +L L V AEG Sbjct: 919 IDDFGTGYSSLAMLKQLPISNIKIDKSFIRDMDVDKDDGAIVRAIIAMAHSLELTVTAEG 978 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPA 647 VE+ + L + N QG+L++KP+PA Sbjct: 979 VETEDQKNILLQEKCNYLQGYLYSKPLPA 1007 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 196/551 (35%), Positives = 304/551 (55%), Gaps = 8/551 (1%) Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR-REAAASRRN 172 E ++ A AI++ D I ++N+ D G +++GQS+ + R REA R Sbjct: 268 ESIIESASDAIIVADHNRTILQWNQGATDLFGYTTDEMVGQSIVAIIPERFREA--HERG 325 Query: 173 NRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE--IFLICSGTDITEERRAQ 230 R + +G + + ++ + + G+ K + IF DI+E +R + Sbjct: 326 MRRYEATGEKRVIGQTVELIGLRKDGVEVPIEMSLGTWKTDKGIFFSSIIRDISERKRIE 385 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGD 290 ++ L D +TGLPNR D +D + + + + + Y+DLDNFK +ND +GH GD Sbjct: 386 AQINDLVYLDPLTGLPNRRLFSDRLDALLGQSQSEQFALYYIDLDNFKVINDRFGHSIGD 445 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLI 350 Q L+ V+ I S ++ LAR GGDEF++L+ +T + A ++ L PF + Sbjct: 446 QFLKQVTTRIQSTIQKTDTLARLGGDEFIILSPDTKSNLAAHRAQELINVLHPPFELENE 505 Query: 351 EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLD 410 EV+T S+GI+L P G + +I++AD AMY AK G+ + FT E+N+ V L Sbjct: 506 EVFTGASIGISLHPSDGDTAEELIKNADIAMYRAKADGKNGYQFFTNELNESVSRRSNLS 565 Query: 411 TNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIV 469 LRK + + +HYQP+I E V +EALVRW PE G+I P +FI AEE+G I Sbjct: 566 MALRKGIGRGEFTVHYQPQIQLETEMVIGMEALVRWNHPELGMISPGEFIPIAEETGSIH 625 Query: 470 PLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPID 528 LG +V+ + RQ W+D I RVAVNISA Q A + + + + L E ++ Sbjct: 626 RLGEFVLNEACRQNKAWQDASIPPFRVAVNISAVQFAQKDLPEVVSRALAASGLEAQYLE 685 Query: 529 VELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVR 588 +ELTES +I++ + A+ + + LG + +DDFGTGYSSLS L FPID +K+DQ F + Sbjct: 686 LELTES-VIQSADRAIETMHELVALGVHLSIDDFGTGYSSLSYLKLFPIDTLKIDQHFTK 744 Query: 589 DIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAV 648 +I +LV+ I+ +A L+L VIAEGVE+ + AFL N+ QG+ + +P+PA Sbjct: 745 NIESDEKDAALVKTIIRMAHELDLNVIAEGVETENQVAFLKAESCNQAQGYFYNRPLPAE 804 Query: 649 AFERWYKRYLK 659 E ++++Y K Sbjct: 805 EIEVFFQQYKK 815 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 335 bits (859), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 196/555 (35%), Positives = 316/555 (56%), Gaps = 15/555 (2%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A V + + A+ + D +G I N D TG E +V Q++ L SR +A Sbjct: 455 LKLAASVYNNSREAMSVQDDKGLIININAAFTDITGYTESEVKNQNIKILQCSRNNRSAY 514 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLF---RNKFVHSGSGKNEIFLICSGTDITEE 226 + + G ++ E+W+ G+ ++ F + + L +DITE+ Sbjct: 515 EQMHMAVEEEGR-WQGEVWLRRKNGEEFVVWLTLNALFDAEAQTQRHVALF---SDITEK 570 Query: 227 RRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAY 284 ++A++ + AN D++TGLPNR + D ++ I +D+ + +++LDLD FK+VND Sbjct: 571 KQAEKIIWKQANYDTLTGLPNRRMLLDYLNAEILKSDSREQHFALMFLDLDYFKEVNDTL 630 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMASRILTRLRL 343 GH GD LL + + + +C+ V+AR GGDEF +VL+ T ++ +A ILTR+ Sbjct: 631 GHDMGDMLLSEAAKRLKACIRDSDVVARLGGDEFTIVLSGVTDIKGVDKVAKHILTRIAE 690 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 P+ +G Y S S+GI L P+ S +++HAD AMY AK+ GR +F FTP M QR Sbjct: 691 PYNLGEETAYISASIGITLYPDDASTIEGLLKHADQAMYAAKDEGRNRFHYFTPSM-QRY 749 Query: 404 FEY-LWLDTNLRKALENDQLVIHYQPKITWRGEVR-SLEALVRWQSPERGLIPPLDFISY 461 +Y + L +LR A+ + + ++YQP ++ +G + EAL+RW+ P+RGL+ P++FI+ Sbjct: 750 AKYRMRLIQDLRSAIADHEFELYYQPIVSLQGGLGLKAEALIRWRHPKRGLVSPIEFIAV 809 Query: 462 AEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQ-TIFTALKQVLQE 519 AEE+GLI+ +G WV RQ A WRD+ GI +++++N S Q D+ + +L+ Sbjct: 810 AEETGLIIEIGNWVFQQAARQSALWRDRFGIEVQISINKSPVQFRDEGESINSWVNLLKT 869 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 LN I +E+TE L++ + S + Q+ G Q+ LDDFGTGYSSL+ L +F ID Sbjct: 870 LNLTNNNICIEITEGLLLDGNSAISSKLTQYRDSGIQISLDDFGTGYSSLAYLKKFDIDF 929 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+DQ F R++ +L AI+ +A L ++VIAEGVE+ + L G + QG+ Sbjct: 930 LKIDQSFTRNLDSNSDDFTLCEAIIVMAHKLGMKVIAEGVETDYQRKILANAGCDFGQGY 989 Query: 640 LFAKPMPAVAFERWY 654 LF++P+P FE+ + Sbjct: 990 LFSRPVPVEKFEQAF 1004 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 335 bits (859), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 201/557 (36%), Positives = 313/557 (56%), Gaps = 31/557 (5%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS--VFKLFMSRREAA 167 L A +V + I+ILD+ I N TG E + +G++ +F R A Sbjct: 240 LRLAAKVFENSAEGILILDAGARIIAVNDAFTRITGYAEEEALGKASRIFSAEQQARAAM 299 Query: 168 ASRRNNRVFF--------RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 + + + G Y EL I + + L S +F Sbjct: 300 QQALADCGHWQGEMLDRRKGGQWYPAELSISALRDEDGLL---------SNYVAVF---- 346 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNF 277 +DIT+ + A+ERL+ LAN D +T LPNR+ + +D A+ D + ++ V+++DLD F Sbjct: 347 -SDITQRKEAEERLQFLANHDPLTRLPNRSRLTASLDEALTRMDGEDGRLAVMFIDLDRF 405 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASR 336 K +ND++GH GDQLL ++++ + + +LAR GGDEF +L S S L MAS Sbjct: 406 KLINDSFGHQVGDQLLCEIAIRLSRVVGERGMLARLGGDEFTLLMSGFDSHHQLADMASD 465 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 IL L P + EV+ + S+GI++ P G D+ ++++AD AMY AKE G+ + F Sbjct: 466 ILAALGKPLCLEAHEVFITGSIGISVFPHDGRDARTLLKNADVAMYRAKEAGKNTYQFFD 525 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE--VRSLEALVRWQSPERGLIP 454 MN + FE L L+ LR ALE + +HYQP+++ GE + EAL+RW+ P+ GL+P Sbjct: 526 IGMNTQTFERLLLENGLRMALERHEFELHYQPQLS-AGERALAGAEALLRWRHPQLGLVP 584 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTAL 513 P FI+ AEE+GLI P+G WV+ + RQ+A W +G+ + R+AVN+S RQ ++ + Sbjct: 585 PARFIALAEETGLIKPIGDWVLREACRQLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAKV 644 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 LQ +++E+TES ++++ A+S++ + LG + +DDFGTGYSSLS L Sbjct: 645 AGALQAAGLAAGRLELEITESMIMQSPTEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLK 704 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RFP+D +K+DQ FV + + ++ AI+A+A+ L QV+AEGVES ++ AFL G Sbjct: 705 RFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMAKKLKFQVVAEGVESEEQAAFLEGKGC 764 Query: 634 NERQGFLFAKPMPAVAF 650 + QG+ F +P+PA F Sbjct: 765 HVLQGYHFGRPLPAGEF 781 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 334 bits (857), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 191/544 (35%), Positives = 311/544 (57%), Gaps = 8/544 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L +V ++I D++ + N TG+ +++G+ + L +++E S Sbjct: 388 LRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIMGRHLSTL-QTKQEKPIS 446 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 + R +S ++ ELW G+ L+ S + + +DIT ++ Sbjct: 447 FQRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFVAIFSDITLRKQT 506 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHL 287 ++RL LA+ D++TGLPNR+ D ++HAI+HA ++++ V+++DLD FK +ND GH Sbjct: 507 EQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDRFKFINDTLGHP 566 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFR 346 GD LL+ V+ + + + +AR GGDEF V+ N T SA+ + +I++ PF Sbjct: 567 IGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSAISLITQKIISACEKPFN 626 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 I E++ S S+G++L PE G +++ +++ AD AMY AK+ G+ FT E+N E Sbjct: 627 IKGNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQAKKRGKSCCQFFTTEINTAATEQ 686 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEES 465 L L LR+AL + ++YQP I G + S+EAL+RW PE GLI P FI AEE+ Sbjct: 687 LALKNLLRRALARKEFQLYYQPIINMESGAIVSVEALIRWVDPELGLISPNTFIPLAEEN 746 Query: 466 GLIVPLGRWVILDVVRQVAKW-RDKGINLRVAVNISARQLADQTIFTA-LKQVLQELNFE 523 GLI+PLG WV+ Q W + +R+A+N+SARQL +QT F+ + ++L++ F Sbjct: 747 GLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINLSARQL-EQTDFSERVSEILKKTPFP 805 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 +++ELTES LI E +L + ++G ++ LDDFGTGYS L+ L RFPID +K+D Sbjct: 806 TDHLELELTESMLINRMESSLKTLNTLKKMGCRLSLDDFGTGYSPLAYLKRFPIDTVKID 865 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 + FV+ I P ++ A+ +A +L VIA+GVE+ ++ FL + ++E QG+ + Sbjct: 866 RSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGVETREQLNFLNEIKVDEAQGYFISY 925 Query: 644 PMPA 647 P+PA Sbjct: 926 PVPA 929 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 334 bits (857), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 193/548 (35%), Positives = 304/548 (55%), Gaps = 8/548 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A V + IV+ D I NR D TG ++ +V+GQ+ ++ S R Sbjct: 732 LQLAATVFDNSREGIVLTDKNEKIVSVNRAFSDITGYRDDEVLGQTP-RILKSNRHGRDF 790 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 +N ++ E+W GQ + + I TDI++ + + Sbjct: 791 YQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAVCDDQQEVSHYIAVFTDISQAKES 850 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHL 287 QE+L L+ D +T LPNR+ +D A+ HA+ ++ V+ DLD+FK VND++GHL Sbjct: 851 QEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHHSFAVLCFDLDHFKDVNDSFGHL 910 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFR 346 GD LLR ++ + SCL +LAR GGDEF++L + + S + MA IL +L+ P Sbjct: 911 VGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLEDVADSHRVTMMAEEILHQLQQPIC 970 Query: 347 IGL--IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 + +EV S SVGIA+ PEHG D+ +++ AD+A+Y AK+ GR +F + EM ++ Sbjct: 971 LTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSALYRAKQHGRARFAYYNEEMTEQAQ 1030 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAE 463 E + L +LR+ALE + ++YQP++ G++ EAL+RW SPE GL+ P FI AE Sbjct: 1031 ERVQLSFHLRQALEKKEFAVYYQPQVDLGTGQIVGAEALMRWNSPELGLVTPDRFIPLAE 1090 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNF 522 E G I +G W++ V Q W D G L +AVN+SA Q A++ I LK+ LQE + Sbjct: 1091 EIGCICSMGTWILRQVCEQGKAWLDAGYPPLTLAVNLSAVQFAEEDIACRLKETLQETGY 1150 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +++E+TES L+ ++ + +++ ++LG ++ LDDFGTGYSSL+ L FP+ +K+ Sbjct: 1151 PAEYLELEVTESTLMHKEQQTIDLLKSLNELGVRLALDDFGTGYSSLAYLKYFPLHLLKV 1210 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 D+ F+ D+ +V AIV + L ++AEGVE+ + L + G + QG+ + Sbjct: 1211 DKSFIDDLPADANDCKMVTAIVQMGHGLGFDLLAEGVETVAQRDCLAQLGCDYYQGYYCS 1270 Query: 643 KPMPAVAF 650 P+PA F Sbjct: 1271 PPVPACEF 1278 >UniRef50_Q55576 Slr0359 protein n=2 Tax=Cyanobacteria RepID=Q55576_SYNY3 Length = 1244 Score = 334 bits (856), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 183/472 (38%), Positives = 283/472 (59%), Gaps = 8/472 (1%) Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E+E I G+ +LFR + + + +DITE + A E+L AN DS+T Sbjct: 742 ELEYRIVQPGGKERWLFRRSQLVRDGEHQPLRIDSIDSDITERKLAAEKLHYNANHDSLT 801 Query: 244 GLPNRNAMQDLIDHAINHA---DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 LPNR+ D + HA+ + + V++LDLD FK +ND+ GH GD LL+ ++ + Sbjct: 802 NLPNRSMFLDRLGHALQRNLRRRDLRFAVLFLDLDGFKIINDSLGHSCGDLLLQGIAHRL 861 Query: 301 LSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 CL + LAR GGDEF +L N T + A+A RI L+ PF + E++T+ S+G Sbjct: 862 RQCLRPEDTLARLGGDEFTMLIENITCPEDVIAVAQRIHQELQKPFNLNGQEIFTNTSIG 921 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 IAL+ H ++R ADTAMY AK G+G++ +F M+ + L + +LR+A++ Sbjct: 922 IALNHPHYGHPQDVLRDADTAMYRAKAAGKGRYAIFNQTMHHHAVQRLQRENDLRRAIDR 981 Query: 420 DQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 +L +HYQP + + G+++ +EALVRWQ PE GLI P +F++ AEE+GLIVP+G W++ + Sbjct: 982 QELQLHYQPIVCLKTGQLQGVEALVRWQHPEEGLILPEEFVAIAEETGLIVPMGDWILWE 1041 Query: 479 VVRQVAKWRD---KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESC 535 RQ+ + + + +L+V++N+S+RQL DQ + + ++L N + +E+TES Sbjct: 1042 ASRQILELKQSFPQLSHLQVSINVSSRQLRDQRLLKTVDEILSSTNLAPQDLKLEITESL 1101 Query: 536 LIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPV 595 LI+N LA V++ Q Q+ LDDFGTGYSSLS L RFPI+ IK+D+ FV + Sbjct: 1102 LIDNLNLAADVLKSLRQRNIQISLDDFGTGYSSLSYLHRFPINTIKVDRSFVNTMEPNNQ 1161 Query: 596 SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 + ++V IV +A L L VIAEG+E+ + L G + QG+ FA+P+P+ Sbjct: 1162 NTAIVHTIVTLAHTLGLDVIAEGIETERHLTQLHWLGCDAGQGYYFARPIPS 1213 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 334 bits (856), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 195/541 (36%), Positives = 301/541 (55%), Gaps = 7/541 (1%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 V IVI D+ NI + NR D G E++++GQ ++F S + + Sbjct: 533 VFESTREGIVITDAERNIIKVNRALIDLFGYPENELLGQRP-RIFHSGKHDGHFYQQMLQ 591 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + E+W G+ L + + S ++ I TDI++ + ++ RL Sbjct: 592 ALDEHGFWRGEMWNRRQNGELLPMMTSINPVCDSNGEILYYISIYTDISQLKDSEARLEH 651 Query: 236 LANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLL 293 +A D +TGLPNR + +D A+ HA ++ +V ++ LDLD+FK VND++GH FGD+LL Sbjct: 652 MALHDPLTGLPNRAMLGQKLDSALQHAMLNSTRVALLMLDLDHFKNVNDSFGHHFGDELL 711 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVL-ASNTSQSALEAMASRILTRLRLPFRIGLI-E 351 VS + L V+ R GGDEF VL +N S + +A RI+ L PF + E Sbjct: 712 HQVSARLKQQLRESDVVCRLGGDEFTVLLQNNPSPDDVSLLAERIIHALHQPFLLSNARE 771 Query: 352 VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDT 411 V S+GI+L PEHGS + +++ ADTAMY AK GR + F+ E+ + L L+ Sbjct: 772 VMIGTSIGISLYPEHGSTAEELMQQADTAMYRAKHDGRDGYRYFSEELFLKAKARLELEQ 831 Query: 412 NLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 L +A+ + + YQP+I+ + ++ EAL+RW PE GLIPP +FIS AEE+GLI Sbjct: 832 RLHRAITGQEFKVFYQPQISIKTNQIIGAEALLRWDDPEYGLIPPSEFISVAEETGLIQN 891 Query: 471 LGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDV 529 +G WV+ + RQ W D+ + + +AVN+S QL + + +L F +++ Sbjct: 892 IGEWVLYETCRQGRDWLDQHLPPINLAVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLEL 951 Query: 530 ELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRD 589 ELTES L+E E + ++Q Q G ++ +DDFGTGYSSL+ L +FP+D +K+D+ FV D Sbjct: 952 ELTESALMEQQEETVKILQGLRQQGIRIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVED 1011 Query: 590 IHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVA 649 I + + IVA+ +L L V+AEGVE+ + FL + G + QG+L++ P+PA Sbjct: 1012 IPHERDDMEIAATIVAMGHSLRLTVLAEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEE 1071 Query: 650 F 650 F Sbjct: 1072 F 1072 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 333 bits (855), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 201/561 (35%), Positives = 316/561 (56%), Gaps = 12/561 (2%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 A+ A R + GL+ +V A A+++ DS I N E TG DV G+ Sbjct: 82 AYRQLLATKRQVEAGLALQRLIVDHASEAMMLTDSAQRILSVNSAFEQITGYAGKDVFGK 141 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 + + + + AS RN F ++E E+W G ++ + + ++ + Sbjct: 142 TP-TMLSAGHQGLASHRNVWDFVAENGSWEGEIWDRRKDGT---IYPKQMRITAICEDGV 197 Query: 215 FL---ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGV 269 L + +DI+E R ERL LA D +T LPNR A+ +D + A N++ + Sbjct: 198 QLSHFVAVFSDISESRAQAERLEYLARHDPLTNLPNRLALDAHLDTLLEGATPGINRLAL 257 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQS 328 + +DLDNFK +ND+ GH GD+LL +++ + + ++ + L R GGDEF+V+ ++ Sbjct: 258 LIIDLDNFKTINDSLGHHAGDRLLSELARRLGAQMDLTKRLFRLGGDEFVVVVDQLINEE 317 Query: 329 ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 A+ + ++ + P I ++ + S+GI+L PE G D+ A+IR+ADTAMY AK G Sbjct: 318 AVIELVQQLAGGIGDPCNIDGHVLHCTSSIGISLYPEDGRDAQALIRNADTAMYYAKANG 377 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQS 447 R FT MN + L L++ L AL +QLV++YQP+I G+V +EALVRW+ Sbjct: 378 RNNHKFFTEPMNAAANKRLHLESELWCALAENQLVLYYQPQIDLLSGKVVGVEALVRWRH 437 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLAD 506 P RGLIPP +FI AEE GLI+PLG WV+L RQ +W D GI++ +AVNISA Q Sbjct: 438 PLRGLIPPAEFIPVAEECGLILPLGHWVLLTACRQAREWLDAGIDMGEMAVNISAHQFRQ 497 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 ++++ +L E +++E+TES ++ + A+ + Q +G ++ +DDFGTGY Sbjct: 498 PEFISSVQAILAETGLPTGRLELEITESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGY 557 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSL+ L RFP+D +K+D+ F+ D+ P + SLV +IV + ++L LQ++AEGVE+ + Sbjct: 558 SSLAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAE 617 Query: 627 FLTKNGINERQGFLFAKPMPA 647 FL QGF F +P+ A Sbjct: 618 FLRTLECERVQGFHFYQPVCA 638 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 333 bits (855), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 184/429 (42%), Positives = 268/429 (62%), Gaps = 5/429 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGV--VYLDLDNFKK 279 D+TE R QE+L AN D +T LPNRN ++D ++HA+ A + GV V+LDLD FK Sbjct: 607 DVTELIRYQEQLEYQANYDGLTRLPNRNLLRDRLEHALVVAQRHHTGVAVVFLDLDGFKN 666 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRIL 338 VND+ GH GD+LL V+ + C +AR GGDEF+++ ++T + +L R+ Sbjct: 667 VNDSLGHSVGDRLLGVVAERLARCSRTSDTVARHGGDEFVIVMTDTVDEQSLITWMERVR 726 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 + P + E+Y CS+G +L P+ G D+ +++ AD AMY AK+ GR F + PE Sbjct: 727 ASIAEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADVAMYRAKDMGRNTFQFYQPE 786 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLD 457 MN L L+ LR+AL +++ ++HYQP++ G++ +EALVRW PE GL+PP Sbjct: 787 MNASAGARLNLERRLRRALRDNEFLLHYQPQVDIVSGQIVGIEALVRWHDPEAGLVPPSS 846 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQV 516 FI AEESGLI PL WV+ + RQ W+D+G+ RV+VN+SAR + I + QV Sbjct: 847 FIPLAEESGLIGPLSEWVLREACRQNKAWQDQGLPPARVSVNLSARVFQQRNIAKLVMQV 906 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L E E +++ELTES ++ N E A+ ++ + LG + +DDFGTGYSSLS L RFP Sbjct: 907 LAETGLEPRYLELELTESTIMRNAEEAVLMLNELHALGIGLAIDDFGTGYSSLSYLKRFP 966 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 +D +K+D+ FV DI +++ AI+A+A +L LQVIAEGVE++ + FL + +E Sbjct: 967 VDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQVIAEGVETSAQLDFLKERACDEM 1026 Query: 637 QGFLFAKPM 645 QGF FAKP+ Sbjct: 1027 QGFYFAKPL 1035 >UniRef50_B8KFD6 Diguanylate cyclaSe/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KFD6_9GAMM Length = 643 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 181/519 (34%), Positives = 308/519 (59%), Gaps = 15/519 (2%) Query: 142 DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 ++ G D+I Q+ + F S +E + + + G ++ VE W+ +G R+ L Sbjct: 117 NFLGRASKDIIRQT-DRQFFSEKEVKLIHATDHIALKEG-SHVVERWMEDPQGHRVLLSI 174 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRI-------LANTDSITGLPNRNAMQDL 254 + + N ++ DIT++++ +E LR LA+ D++TGLPNR + D Sbjct: 175 KLSSFNDTQGNVRGVVGIARDITDQKKTEETLRFQQRSLEHLAHHDALTGLPNRLYLIDK 234 Query: 255 IDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLAR 312 ++HA+ D N + V++LDLD+FK +ND+ GH GD++LR VS + +C+ V+AR Sbjct: 235 LNHALLSPDLNTASLAVLFLDLDHFKDINDSLGHSLGDEVLRAVSRRLSACVRKADVIAR 294 Query: 313 PGGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDST 371 GGDEF ++ S + +A +IL + P + + S S+GI++SP G + Sbjct: 295 LGGDEFTIVLQGIGSSIIAVEVAQKILKVFQEPLTLSDRTLNVSTSIGISVSPGDGVTTE 354 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 ++R+AD AMY AK GR F ++P+M +R L +++++ AL + + YQP++ Sbjct: 355 ELLRNADAAMYRAKRSGRNTFMHYSPDMTERALARLSMESDMHTALARGEFHVAYQPQVD 414 Query: 432 WR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 R GE+ +EAL+RW+ RG IPP +FI AEE+GLI+ +G WV+ +V + + ++ G Sbjct: 415 MRSGELMGVEALMRWEHSTRGNIPPEEFIPIAEENGLILAMGSWVLEEVCAEQKRLKNAG 474 Query: 491 I-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 + ++R AVN+S RQL + ++ ++ + +++E+TES L+ ELA +Q Sbjct: 475 LSDIRYAVNVSGRQLLNPEFLALVEHIVSTKDCSGSQLELEITESVLLHEPELAAKAMQS 534 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 F ++G + +DDFGTGYSSL+ L ++P++ +K+D FVRDI P +++ + I+A+ A Sbjct: 535 FREMGIAIAIDDFGTGYSSLAYLKQYPLNRLKIDASFVRDIVVDPDDRAIAQTIIALGNA 594 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM-PA 647 L+L+VIAEGVE+ ++ A L +G + QG+LF+KP+ PA Sbjct: 595 LDLEVIAEGVETEEQRAMLVSDGCSLGQGYLFSKPISPA 633 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 187/540 (34%), Positives = 313/540 (57%), Gaps = 13/540 (2%) Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 +I+I D+ I N+ TG + ++IGQS L + R+ R + G + Sbjct: 692 SIMITDAAQRIVSVNQAFCATTGYRAEEIIGQSSLALRSDVHDGIYFRQLWRGIRKRG-S 750 Query: 183 YEVELWIPTCKGQ---RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANT 239 ++ E W G+ + + G+ N I L TDI+ ++ ++R++ +A+ Sbjct: 751 WQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNYIALF---TDISAQKSQEQRIQHIAHH 807 Query: 240 DSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVS 297 D++T LPNR + + A+ A N V V+++DLD+FK +ND+ GH GD +L + Sbjct: 808 DALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFKNINDSLGHHVGDCVLVTAA 867 Query: 298 LAILSCLEHDQVLARPGGDEFLVLASNT--SQSALEAMASRILTRLRLPFRIGLIEVYTS 355 + + ++R GGDEF+++ ++ S E M R+L +R P+ G E++ S Sbjct: 868 NRLSMGVRDGDTVSRLGGDEFVIILADIEDSHQIEEIMKHRLLPLMRQPYDAGGYELHCS 927 Query: 356 CSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRK 415 CS+GI++ PE G D ++R+ADTAMY AKE GR + +T E+N R + L ++T+LRK Sbjct: 928 CSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNYHFYTEELNSRAMQRLSIETSLRK 987 Query: 416 ALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRW 474 +E ++L++HYQPK+ G+ LEAL+RWQ P+ G+I P++FI AEE+GLI+P+G+ Sbjct: 988 GIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPDHGMISPMEFIPIAEETGLIIPIGKQ 1047 Query: 475 VILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTE 533 VI + RQ+++W G+ ++ +++N+SA Q D+ L Q+++E I++ELTE Sbjct: 1048 VIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFVEDLVQLVREEGVSPHRIELELTE 1107 Query: 534 SCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQ 593 + L+E+ + V++ G +DDFGTGYSSL+ L RFPID +K+D+ F+R + ++ Sbjct: 1108 TMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLHRFPIDCLKIDRSFIRGMLER 1167 Query: 594 PVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 P ++++AI+ + L++QVIAEGVE E L G + QG+ A+P+ W Sbjct: 1168 PADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCDGIQGYFVARPLTPEQVPEW 1227 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 194/543 (35%), Positives = 309/543 (56%), Gaps = 11/543 (2%) Query: 128 DSRGNIQRFNRLCEDYTGLKE-HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY--E 184 D+RG N+ G ++ DV+G++ F F + A ++++ +SG Sbjct: 43 DTRGRFIFLNKTLMAVMGAQDLQDVLGKTDFD-FNTPDNAQNYYQDDQTVIQSGQPLINR 101 Query: 185 VELWIPTCKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E + G+ +L +KF V + +GK I L+ G DITE ++++E+++ LA DS+T Sbjct: 102 EEPVVDRQSGRIRWLLTSKFPVFNDTGKT-IGLVGIGRDITERKQSEEQIQYLATHDSLT 160 Query: 244 GLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 LPNR L+ AI A ++ V+++DLD FK +ND GH GDQLL ++ Sbjct: 161 ALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGHDAGDQLLITMANRFR 220 Query: 302 SCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 +CL ++ R GGDEF++L S +A +IL+ P + E + S+GI Sbjct: 221 TCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPLDVHGQECRVTASIGI 280 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 L PE D A++++AD AMY AKE G+ + ++P++ R E L L+ NLRKALE Sbjct: 281 CLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLERLMLENNLRKALERH 340 Query: 421 QLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 + +HYQ K + G++ +EALVRWQ PE G I P FI AEE+GLIV LGRWV+ Sbjct: 341 EFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEETGLIVHLGRWVLRAA 400 Query: 480 VRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 Q W+ +G+ + +AVN+SARQ D + + L+E +++E+TE +++ Sbjct: 401 CTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLAPELLEMEITEGMIMQ 460 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 + E A+ ++ LG ++ +DDFG GYSSL+ + RFPID +K+D F+RDI ++ Sbjct: 461 DAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVDSSFIRDIPANREDRA 520 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 + AI+A+ + L+L VIAEGVE+ +++ FL + ++ QG+ F+KP+ F R+ ++ Sbjct: 521 ITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSKPVSPEEFTRFMLAHM 580 Query: 659 KRA 661 A Sbjct: 581 VEA 583 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 194/556 (34%), Positives = 303/556 (54%), Gaps = 7/556 (1%) Query: 101 AVARDLS-HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 A+ R+ S H L A+ I I D N+ D TG E DV+G L Sbjct: 417 AIQRESSDHRLHQAKIAFESTAEGIFITDDELRTIAINQGFTDITGYTEDDVLGNIPNVL 476 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 ++ R + R G + E W ++ + + I + Sbjct: 477 EADLKKPEPHREIWKALTREGR-WRGEFWNQRKNNEQYAEWVTLTAVNNEEGKVINYVGV 535 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNF 277 DI+E + +Q RL L N D +TGLPNR M +L+DHAI +A+ N++ ++++DLD F Sbjct: 536 FADISEIKHSQSRLNELVNRDPLTGLPNRRLMHELLDHAIKYAEREQNEIALLFVDLDRF 595 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASR 336 K +ND GH GD+LL +VS I + + +AR GGDEF+V+ + A +A + Sbjct: 596 KAINDTLGHQMGDKLLFEVSQRIRAAVRDSDAVARLGGDEFIVMMDVLREREDAAKVAKK 655 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 I++ L+ F I E++ S SVGI++ P+ D +I+ AD AMY K G+ C ++ Sbjct: 656 IISSLQNEFLIDGRELFISASVGISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFYS 715 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPP 455 +++Q E L+ LR+AL DQ ++YQ +++ G + E+L+RW PE G++ P Sbjct: 716 ADLSQNAVERFTLENQLRRALARDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSP 775 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQTIFTALK 514 FI AEE+GLI+P+G WV+ QV +W D+G ++ V+VN+S Q+ + Sbjct: 776 AKFIPLAEETGLIIPIGEWVLRQSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVY 835 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 +L E + E +++E+TES ++ N E + V + LG ++ +DDFGTGYSSLS L R Sbjct: 836 GILVETDCESHLLELEITESTVMHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKR 895 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 P+D IK+DQ FVRD+ ++ AI A+AQ+L VIAEGVE+ ++ +FL K G Sbjct: 896 LPLDKIKIDQSFVRDLPNNSDDAAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQ 955 Query: 635 ERQGFLFAKPMPAVAF 650 + QG+L+++P+ A F Sbjct: 956 QGQGYLYSRPVTASEF 971 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 333 bits (854), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 193/547 (35%), Positives = 305/547 (55%), Gaps = 19/547 (3%) Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 E+ +++I DSRG I + N++ TG + +G++ L R A R + Sbjct: 371 ESEESMIITDSRGIILKVNQVFTATTGYTSEEAVGKTPSLLKTDRHSAEFYHEMWRQIKQ 430 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF--LICSGTDITEERRAQERLRIL 236 +G ++ E+W G+ N +++ KN + + S TD+TE + A+E++ L Sbjct: 431 TGK-WQGEIWDKRKNGEIYPKLLN--IYAVKSKNGVVTHYVGSYTDLTERKMAEEKIISL 487 Query: 237 ANTDSITGLPNRNAMQDLIDHAINHADNNKVG----VVYLDLDNFKKVNDAYGHLFGDQL 292 A D++TGLPNR + D +++A+ A + G ++++DLD FK +ND GH GD L Sbjct: 488 AFYDTLTGLPNRRLLLDRLNYAL--ASGLRTGKNGALLFIDLDKFKTLNDTLGHDIGDLL 545 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS------RILTRLRLPFR 346 L+ V+ + +C+ +AR GGDEF+V+ + + ++EA A +IL LR+P++ Sbjct: 546 LKQVAHRLKACVREIDTVARIGGDEFVVMLEDLNIESVEAAAQTEVIGEKILAALRMPYQ 605 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 + E ++S S+GI+L +G ++ AD AMY AK+ GR + F M + Sbjct: 606 LLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMYQAKKSGRNKLRFFDQRMQDTISSR 665 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 L+ LRKAL N+QL +HYQ ++ + E L+RW P G+I P F+ AEE+G Sbjct: 666 ANLEAELRKALANEQLQLHYQIQVDSAHQTIGAEVLLRWIHPVNGIISPAQFVPVAEETG 725 Query: 467 LIVPLGRWVILDVVRQVAKWRDK--GINLRVAVNISARQLADQTIFTALKQVLQELNFEY 524 LI+P+G WV+ Q+ KW+D L +A+N+SARQ T ++ V++ + Sbjct: 726 LILPIGLWVLETACAQLKKWQDNPATAQLILAINVSARQFHQNGFATEVRSVIERHDINP 785 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 + +ELTE L+ N + ++ ++ + G Q LDDFGTGYSSL L R P+ +K+DQ Sbjct: 786 ALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTGYSSLQYLKRLPLAQLKIDQ 845 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 FVRD+ Q++VR I+A+A +LNL VIAEGVE+ + L KN + QG+LF KP Sbjct: 846 SFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQRQILLKNQCSHFQGYLFGKP 905 Query: 645 MPAVAFE 651 MP FE Sbjct: 906 MPIEQFE 912 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 203/543 (37%), Positives = 308/543 (56%), Gaps = 17/543 (3%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 ++ + AIVI D+ +I NR D TG + IG+ L R+ A ++ + Sbjct: 504 KIFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPSLLSSGRQPPAFYQKMWQ 563 Query: 175 VFFRSGNAYEVELWIPTCKGQ------RLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 + G+ + E+W G + L R++ +G + + L +DI+E + Sbjct: 564 QLAQRGH-WAGEIWNRRKDGTIYPEWLSISLLRDE---AGQVSHHVALF---SDISERKE 616 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGH 286 + +R +A D +T LPNR + D + AI A N++ V++LDLD+FK +ND GH Sbjct: 617 QEAHIRHMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGH 676 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTRLRLPF 345 GD+LL+ V+ + + + R GGDEF+++ + A A +A R+L LR PF Sbjct: 677 AHGDELLKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPF 736 Query: 346 RIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 +I + S S+GI+L P++GS+ ++ AD AMY AK GR ++ FTPE+N +V E Sbjct: 737 QIDGQALAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPELNAQVAE 796 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEE 464 L L+ +LR+ALE QL + YQP+ + EAL+RWQ PE+GLI P FI AEE Sbjct: 797 RLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEE 856 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEY 524 +GLIV +GRWV+ + RQ A W G LRVAVN+SARQL + ++ L Sbjct: 857 TGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHRLPS 916 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 C +++E+TES L+E+ E A+ +Q F + G + +DDFGTGYSSL+ L RF D IK+D+ Sbjct: 917 CWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDR 976 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 FV ++ ++V AIV +A+AL +Q +AEGVES ++ FL + G + QG+L +P Sbjct: 977 AFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRP 1036 Query: 645 MPA 647 A Sbjct: 1037 QSA 1039 >UniRef50_Q2BCE5 Putative uncharacterized protein n=3 Tax=Bacillus RepID=Q2BCE5_9BACI Length = 744 Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 171/438 (39%), Positives = 266/438 (60%), Gaps = 4/438 (0%) Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKK 279 G DITE ++++ + +A D++TGLPNRN + + +N + K V++LDLD FK Sbjct: 306 GRDITERKKSERTMEYMAFYDTLTGLPNRNEIMKQLQGILN-SGKEKAAVLFLDLDRFKI 364 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILT 339 +ND GH GD LL+ + + + ++AR GGDEF++L + +E A I+ Sbjct: 365 INDTKGHSTGDLLLKKAGIRLEDTVGSLGLVARQGGDEFIILFEEKEKQQIEGAARAIIE 424 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 + PF + E Y + S+GI+L PEHG+D +I+HADTAMY AKE G+ F +T + Sbjct: 425 QFNKPFILEGEEFYITPSIGISLYPEHGTDQETLIKHADTAMYLAKERGKNNFQFYTSSL 484 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDF 458 + L+ LRKAL+ +L++HYQP+I + G+++ EALVRWQ P+ L+PP +F Sbjct: 485 EGLASRKMALENGLRKALDRGELLLHYQPQIDLKTGKLKGTEALVRWQRPDGHLVPPGEF 544 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVL 517 I AEE+GLIVP+G+W++ Q +W+ +G ++ +AVNIS RQL D +K VL Sbjct: 545 IPLAEETGLIVPMGKWILRTACEQHKRWKLEGAGSVPIAVNISVRQLEDPEFIMYVKTVL 604 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 + E +++E+TES +++N E A + + ++G ++ +DDFG GYSSLS L PI Sbjct: 605 SSCDIEPGCLELEITES-IMQNIEKATIALNELKKIGIRLSIDDFGKGYSSLSYLKHLPI 663 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D IK+D+ FV DI + SLV+AI+ + LN V+AEG+E ++ FL +N Q Sbjct: 664 DTIKIDKSFVDDILDPAQNGSLVKAIIDMGLNLNFSVVAEGIEHKEQAEFLLENNCPVGQ 723 Query: 638 GFLFAKPMPAVAFERWYK 655 G+ F++P+ F+ + K Sbjct: 724 GYYFSRPVTGEVFKEFIK 741 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 210/581 (36%), Positives = 318/581 (54%), Gaps = 30/581 (5%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A W D R + L V+ H +V+ D G I NR + TG +V+ Sbjct: 383 AGVWIDITE-QRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVV 441 Query: 153 GQSVFKLFMSRREAAASRRNNRVFF-------RSGNAYEVELWIPTCKGQRLFLFRNKFV 205 GQ+ F+ S R++R F+ + ++ ELW G+ LF +++ Sbjct: 442 GQN--PRFLQ------SGRHDRGFYLSMWAALKEAGHWQGELWNRRKNGE---LF-PEWL 489 Query: 206 HSGSGKNEI----FLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH 261 + +NE+ + TDI++ ++ ++RL LA+ D +T LPNR + ++HA++ Sbjct: 490 TLNAVRNEVGHVTHYVGVFTDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDG 549 Query: 262 ADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL 319 A +V V++LDLD FK VND+ GH GD+LLR V+ + L + L R GGDEF+ Sbjct: 550 AQRRGCRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFM 609 Query: 320 VLASNTSQSALEAMASRILTR-LRLPFRIG-LIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 VL + A A+ ++ L L PF + EV+ S+GI+ P+ G D ++R+A Sbjct: 610 VLLEHVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNA 669 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEV 436 D AMY AK GR + +T ++ + E L L+T LR+ALE+D+ V++YQP + + G + Sbjct: 670 DAAMYRAKAQGRNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRL 729 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RV 495 EALVRW+ ++ P FI AEE+GLIV LG WV+ D RQV +W D G +V Sbjct: 730 LGAEALVRWKPQGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQV 789 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 AVN+SA Q Q + L VL E +++E+TES L+E E A+ ++++ Q G Sbjct: 790 AVNLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGV 849 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 + +DDFGTGYSSL+ L RF ID +K+D+ FV+DI ++ AIVA+A+AL++ V Sbjct: 850 GLAIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQ 909 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 AEGVE + L G QG+L + P+PA FE + R Sbjct: 910 AEGVEGEAQLELLRGLGCGSYQGYLCSPPLPADEFEARFLR 950 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 332 bits (850), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 170/432 (39%), Positives = 271/432 (62%), Gaps = 5/432 (1%) Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFK 278 +++ E RR + +LR LA+ D++TGL NR +Q + A+++A D+ KV ++++DLD FK Sbjct: 651 SEVLERRRIESKLRYLAHHDALTGLANRTLLQQRLGEAMDNAAQDDTKVAILFIDLDRFK 710 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRI 337 +ND+ GH GD LL++V+ + L + +AR GGDEF+++ + AL +AS+I Sbjct: 711 TINDSLGHHIGDTLLKNVASRLTETLRSNDTIARLGGDEFMIILPLKANEALAGKLASKI 770 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L LR P RI E++ + S+GI P G A++R+ADTAMY AK GR +C FT Sbjct: 771 LDALRPPIRIDGHELFVTPSIGICFYPNDGVTVNALMRNADTAMYQAKANGRNTYCYFTA 830 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPL 456 EMN Y ++++LR+A++ ++ + YQP I + + S EALVRW+ P +GL+ P Sbjct: 831 EMNAAADNYFQIESDLRRAVDRNEFEVFYQPVIDLKTHRITSYEALVRWRHPTKGLVGPA 890 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRV-AVNISARQLADQTIFTALKQ 515 FI+ AEESGLI +G V+ Q+ W D+G + A+N+S Q D + + + Sbjct: 891 QFITVAEESGLIGEIGTIVLRQACSQLRSWIDEGFTSPILALNLSPIQFNDPNLTEGICR 950 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 +L++ + I++E+TE+ ++++ ELAL +Q S G ++ +DDFGTGYSSL+ L RF Sbjct: 951 ILRDYDLTPDRIELEITETVIMQDGELALGTLQNLSSRGFRLSIDDFGTGYSSLAYLKRF 1010 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P+D +K+D+ F+ D+ +++V AI+A+A +L+L VIAEGVE+ ++ L+ N Sbjct: 1011 PVDTLKIDRSFITDMTANENDRAIVTAIMALANSLHLSVIAEGVETKEQYDLLSALNCNF 1070 Query: 636 RQGFLFAKPMPA 647 QG+ AKPMPA Sbjct: 1071 AQGYYMAKPMPA 1082 >UniRef50_C6MGV8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGV8_9PROT Length = 813 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 174/446 (39%), Positives = 276/446 (61%), Gaps = 9/446 (2%) Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA-- 262 V +G K + +I +DIT+ R QE+L A DS+T LPNR + D ++ AI A Sbjct: 351 VETGMEKQFVVMI---SDITKIRETQEQLAHFAYYDSLTNLPNRILIMDRLNQAIAKAAR 407 Query: 263 DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 D++ +G++++DLDNFK++ND GH GD +L +S ILS L L R GDE++ +A Sbjct: 408 DSSLLGILFIDLDNFKRINDTLGHKHGDSMLCLISQRILSVLRQSDTLGRLSGDEYIAVA 467 Query: 323 SNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 N S AL +A +IL + P + +E+ SCS+GI++ P H + +++ ADTAM Sbjct: 468 GNVESYDALIRIAGKILDCISKPVVLSNMEIIPSCSIGISVYPHHSENPDHLVQMADTAM 527 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLE 440 Y AK+ GR + + P + QR +L + L AL ND+ ++++QP+ + E+ +E Sbjct: 528 YEAKKNGRNNYAFYHPGLTQRAAHHLTRERELHHALINDEFLLYFQPQFSLINKEIIGVE 587 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNI 499 AL+RW+ P+RGL+ P + I AE S LI+ +G WV+ + +Q+ +WR G+ NLR++VN+ Sbjct: 588 ALIRWKHPKRGLLLPAEIIPVAETSRLIIDIGNWVLKEACKQLHQWRTDGLDNLRMSVNV 647 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 S RQLAD + + ++L + + +++E+TESCL +N+ + +S ++Q +LG + + Sbjct: 648 SIRQLADNNLQKFIAKLLHQYSLPAHSLELEITESCL-QNELIYISCLEQLKKLGILISI 706 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYS LS L PI +K+DQ FV+ I ++ A++A+AQ LNLQV AEG+ Sbjct: 707 DDFGTGYSCLSSLKNLPIHRLKIDQSFVKGIPLDKNDCAIATAVLALAQKLNLQVTAEGI 766 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPM 645 E+ + FL +G NE QG+ +KP+ Sbjct: 767 ETYDQITFLLGHGCNELQGYWLSKPV 792 >UniRef50_B8DLW6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Desulfovibrio RepID=B8DLW6_DESVM Length = 739 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 192/556 (34%), Positives = 308/556 (55%), Gaps = 18/556 (3%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 F E +V + + GN NR G D++G+SV ++ + Sbjct: 169 FLEALVEGMPNPVFYKTLEGNYIGCNRAFSRLIGRAPEDIVGRSVHEILPQEQACRVEDS 228 Query: 172 NNRVFFRS--GNAYEVELWIPTCKGQR--LFLFRNKFV-HSGSGKNEIFLICSGT--DIT 224 R+ + G Y + + G+ L L+++ F +G E+ GT D++ Sbjct: 229 GRRLTVQDDDGAGYSCMIDLRDAAGEDRVLVLYKSYFRDRTGQRAGEV-----GTFLDVS 283 Query: 225 EERRAQERLRILANTDSITGLPNRNAM-QDLIDHAINHADNNKVGVVYLDLDNFKKVNDA 283 E +R + ++ A D +TGLPNR + Q + DHA+ + ++ V+YLD+DNFK VND+ Sbjct: 284 ELKRKEAQIVHQATHDELTGLPNRMGLRQRMEDHALKGGPDARLAVLYLDMDNFKTVNDS 343 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL---ASNTSQSALEAMASRILTR 340 GH GD+LLR V+ ++ ++AR GGDEF+VL ++ E ++RI Sbjct: 344 LGHAVGDELLRAVAGRLVGMAPRRDMVARLGGDEFVVLLPLSAEGDGELAETESARIQDS 403 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 PF E+Y S+GI+++PE G D ++++A+ AMY AKE G +F FT MN Sbjct: 404 FTRPFNAADHELYVMPSIGISVAPEDGRDPATLLKNAEIAMYRAKEQGGARFRRFTQAMN 463 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFI 459 V L ++ ++RK LEND+ V+ YQP++ G+V +EALVRW P+ L+PPL+FI Sbjct: 464 DDVTRRLAIEKSIRKGLENDEFVVFYQPRVDIVTGQVTGMEALVRWARPDGTLVPPLEFI 523 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQE 519 AE++GL+V LG V+ D Q +W D+ LR+AVNISARQ + ++ L E Sbjct: 524 PVAEDTGLVVALGERVLRDACIQTRRWTDELGPLRIAVNISARQF-QPDLLDRVQAALAE 582 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 +++E+TE+ ++ + +++++++ + G + +DDFGTG+SSL L FPID Sbjct: 583 SGLPPSQLELEITETTMMRDLPTSVAILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDT 642 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 IK+D+ FVRD+ ++V IV + + L+L V+AEGVE+ + FL +G E QG+ Sbjct: 643 IKIDRSFVRDVPGDEGDATIVSTIVTMGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGY 702 Query: 640 LFAKPMPAVAFERWYK 655 ++KP+PA F W + Sbjct: 703 YYSKPLPADGFADWMR 718 >UniRef50_C8SP12 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SP12_9RHIZ Length = 894 Score = 331 bits (849), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 169/434 (38%), Positives = 268/434 (61%), Gaps = 6/434 (1%) Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVND 282 E ++A++++ +AN D +TGLPNR +QD + AI HA + V VV++DLDNFK +ND Sbjct: 454 ERKKAEDQIHFMANHDVLTGLPNRALLQDRLSQAILHAQRYDRWVSVVFIDLDNFKLIND 513 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA--LEAMASRILTR 340 GH GD+LL+ V+ ++ C+ + R GGDEF+++ S+ ++ + ++ T Sbjct: 514 TLGHNAGDRLLKTVAERMVGCISSTDTIVRLGGDEFVLVLSDQPKNVDLIAETLQKLRTA 573 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 + P ++G V + S+GIA P+ G +++ +AD AMY AK GR F + PE N Sbjct: 574 IAEPLQLGDHCVRATASIGIATYPKDGKAPESLVANADAAMYRAKAVGRDNFQFYAPEFN 633 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFI 459 R E L LR AL Q + YQP+I R ++ ++EAL+RW P G + P+ FI Sbjct: 634 TRAHERFLLQEELRTALARSQFELFYQPQIDLRSVQIVAVEALIRWNHPAHGAMAPVGFI 693 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQ 518 AEE+GLIVP+G WV+ + RQ W+D G+ + V+VN+SARQ +++ + + L Sbjct: 694 PTAEETGLIVPIGDWVLHEACRQNKAWQDLGLEPITVSVNVSARQFSEKNLVERVVHALS 753 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 E + E C +++ELTES ++++ LA++ + + LG Q+ +DDFGTGYSSLS L FPI Sbjct: 754 ESDLEGCYLELELTESLIMQDVGLAVTTMNKLQSLGVQISIDDFGTGYSSLSALKTFPIA 813 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+D+ F+ D+ Q++ A++++ Q L ++VIAEGVE+ ++ AFL KN +E QG Sbjct: 814 RLKIDKSFIDDVATNEDDQAVASAVISLGQKLKMRVIAEGVETDEQVAFLRKNNCDEMQG 873 Query: 639 FLFAKPMPAVAFER 652 + F+KP+ + ER Sbjct: 874 YHFSKPVCSREIER 887 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 189/551 (34%), Positives = 300/551 (54%), Gaps = 37/551 (6%) Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV------- 175 ++ D + + N + E TG + G+ + ++F E++ N V Sbjct: 204 GVITTDKQSRVNYLNPVAERMTGWSNAEAQGKPLLEVFRIVNESSRKLVPNPVDVVLQHG 263 Query: 176 -----------FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 R GN Y +E + Q N + ++ D++ Sbjct: 264 EIYGLANHTALIGRHGNEYAIEDSAAPIRDQ--------------DGNVLGVVLVFHDVS 309 Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVND 282 E R ++ LA D +TGLPNR + D ++ A+ A D + +++LDLD+FK +ND Sbjct: 310 EARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALTIARRDQEFIALMFLDLDHFKNIND 369 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILTRL 341 + GH GDQLL+ V+ + SCL ++R GGDEF++L T+ + +A ++L Sbjct: 370 SLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEFMILLPELTNYFSPAEVAEKLLAAA 429 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 +P+ IG E+ S S+GIA+ P+ G + + ++AD AMY AK GR + FT MN+ Sbjct: 430 TVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNADAAMYHAKSLGRNNYQFFTRAMNE 489 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFIS 460 RV E L++ LR+A+E ++ V++YQPKI R G+V EAL+RWQ P GL+ P FI Sbjct: 490 RVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIRWQHPSWGLVAPDRFIP 549 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQE 519 AE+SGLI P+G WV+ + RQ +W+ G+ + VAVN+S QL + ++L Sbjct: 550 IAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQLRQHNFLQEVSEILLM 609 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 E +++E+TES I + ++ + + +G ++ LDDFGTGYSSLS L R PI+ Sbjct: 610 SGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGYSSLSYLKRLPINN 669 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ F+RDI P +++ AI+ ++ L L VIAEGVE+ + FL K G ++ QGF Sbjct: 670 VKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEFLKKEGCDQMQGF 729 Query: 640 LFAKPMPAVAF 650 + ++P+PA F Sbjct: 730 IASRPVPADEF 740 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 206/559 (36%), Positives = 313/559 (55%), Gaps = 14/559 (2%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 V + L L + V VI D G I N TG + +VIG++ L Sbjct: 193 VRQQLEEWLRQSAMVYENMWEGAVITDPAGTILDVNPAFSRITGYAKDEVIGKNPRILKS 252 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 R E A + R G + E+W G+ + + S + + + T Sbjct: 253 DRHEQAFYQHMWRELIEKGQ-WRGEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGVFT 311 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKK 279 D+++ ++++ +L LA D +T LPNR + ++HA+ A+ + KVGV ++DLD F+ Sbjct: 312 DLSQLKQSEAKLESLAYYDPLTALPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFRV 371 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL--ASNTSQSALEAMASRI 337 VN++ + GDQLL VS LSCL D LARPGGDEF+++ A Q A E A + Sbjct: 372 VNESLSYQAGDQLLVMVSKRFLSCLRVDDTLARPGGDEFVLIQEALADPQEATET-AREL 430 Query: 338 LTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 L L PF++ G E+Y S+GI + P G+ ++++A+ AMY AKE GR +F + Sbjct: 431 LASLDQPFQLDGGQEIYLGASIGITVFPGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYA 490 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR----GEVRSLEALVRWQSPERGL 452 +MN L ++ LR+A+EN +L+++YQP+ W+ V EAL+RW++ E L Sbjct: 491 EQMNADALARLQMEMALRQAVENRELLLYYQPQ--WQLADSPSVIGAEALIRWRNKEGEL 548 Query: 453 IPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFT 511 I P FI AE+SGLI +G WVI + RQ+ WRD+G LRVAVN+SARQ + Sbjct: 549 IAPDQFIPLAEKSGLIGAIGDWVIDEACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAE 608 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 + Q L++ ++ELTES L+E E A ++ + + LG + LDDFGTGYSSL+ Sbjct: 609 VVAQALRKHEIPAHCFELELTESILMEKPEEAAELLNRCAALGVGIALDDFGTGYSSLAY 668 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L+RFPI +K+D+ FVRD++ + + + +I+A+A + LQV+AEGVE+ ++ A+L Sbjct: 669 LSRFPITVLKIDRSFVRDLNHRSEAALIADSIIALAHRMGLQVVAEGVETEEQRAYLQSR 728 Query: 632 GINERQGFLFAKPMPAVAF 650 G + QGFLF+ P+PA F Sbjct: 729 GCDLAQGFLFSPPLPAEQF 747 >UniRef50_Q3A1F4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1F4_PELCD Length = 703 Score = 331 bits (848), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 175/431 (40%), Positives = 264/431 (61%), Gaps = 5/431 (1%) Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFK 278 ++IT +A++++R LA D +TGLPNR + + ++ A N+ +GV +D+D FK Sbjct: 252 SNITPHHQAKQKIRQLAYFDGLTGLPNRQLFLEHCNSSLTQARRNRSPLGVCIIDIDRFK 311 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL-VLASNTSQSALEAMASRI 337 VND YG+ GD LL+ VS + C+ + VLAR G DEF V+AS SQ +A ++ Sbjct: 312 GVNDTYGYESGDALLKTVSQRLSDCMSREDVLARLGSDEFAAVIASVGSQDEFSVLAQKM 371 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L L P +IG ++Y S +GIAL P G D+ A++++A TAM+ AK+ G F F+ Sbjct: 372 LHCLTEPIQIGEQKLYCSGGMGIALFPVDGVDAEALLKNAATAMHQAKQHGSNNFRFFSK 431 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPL 456 MN+ +E + ++T LR+AL+ QL +HYQP++ + G + +EAL+RW+SPE G + P+ Sbjct: 432 GMNRMAWERIEIETGLRRALDLQQLALHYQPQVDLKTGHIIGMEALLRWESPELGRVSPM 491 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQ 515 FI AEE+GLI+P+G WV+ RQ W G +LR+AVNISARQ L Sbjct: 492 RFIPLAEETGLILPIGNWVLESACRQAKAWHRAGFPSLRMAVNISARQFKQAGFIDRLDA 551 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 ++Q +++ELTES ++E + L + G ++ +DDFGTGYS LS L F Sbjct: 552 IIQRSGINPELLEMELTESLIMEKSDETLMTLVDIKSRGIKLAIDDFGTGYSMLSYLKHF 611 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 PID IK+D+ FVRDI + ++ AI+A+A +L ++VIAEG+E+ ++ AFL E Sbjct: 612 PIDRIKVDRSFVRDIPENTDDAAITEAIIAMAHSLKIEVIAEGIETREQLAFLKDRACEE 671 Query: 636 RQGFLFAKPMP 646 QG+ F +P+P Sbjct: 672 GQGYYFGRPVP 682 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 330 bits (847), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 192/551 (34%), Positives = 305/551 (55%), Gaps = 5/551 (0%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L E A++I D+R I R N E TG +V+G++ L R + A Sbjct: 408 LRLIETAFQHTRDAVLITDARARILRVNPAFETITGYSAGEVVGRTPRMLQSGRHDGAFY 467 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 RR R G+ + E+W G +++ G + + TDI+E +RA Sbjct: 468 RRFWRALETEGH-WSGEIWNRHRDGHIFPAWQSVSAVKGPDGSTTHYVSIFTDISEFKRA 526 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHL 287 + ++R L+ D +TGLPNR Q +D I A D ++ +V LDLD FK +ND+ GH Sbjct: 527 EAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALVVLDLDRFKTINDSLGHS 586 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRI 347 GD+LL V+ I C +AR GGDEF+V+ +++ +A+ +++ + P Sbjct: 587 VGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILADSDAVRAARVANAMISAIAKPAVA 646 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 G + + S+GI+L P DS ++I+ AD AMY AK GR + F+ EM+ E L Sbjct: 647 GGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHAKSLGRNTYQFFSAEMSAVATERL 706 Query: 408 WLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 L+ L +AL N + ++YQP+I + LEAL+RW+ PE G +PPL FI AEE+G Sbjct: 707 ALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFIPLAEETG 766 Query: 467 LIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYC 525 +I +GRWV+ + RQ +W+ G+ + VAVN+S QL ++ +L Sbjct: 767 IIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDDFPEQVEALLSGCRLAPG 826 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 +++ELTE+ ++ + ++++ + G + +DDFGTGYSSL L RFP+D +K+DQ Sbjct: 827 LLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVDKLKIDQS 886 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 F+RD+ ++ ++ RAI+A+A+ L+L+V+AEGVE+A++ FL + G + QGF F++P+ Sbjct: 887 FIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQGFYFSRPV 946 Query: 646 PAVAFERWYKR 656 PA W R Sbjct: 947 PADEIAGWLSR 957 >UniRef50_B5E7Y8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Geobacter RepID=B5E7Y8_GEOBB Length = 704 Score = 330 bits (847), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 175/461 (37%), Positives = 280/461 (60%), Gaps = 20/461 (4%) Query: 217 IC-SGT--DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVY 271 +C +GT DITE +RA+E++R+LA D++TGLPNR ++ A+ A+ + + V++ Sbjct: 243 VCLTGTIQDITERKRAEEQIRLLAYYDALTGLPNRRFFLQQLEQALVFANRYDRMLAVLF 302 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP------------GGDEFL 319 LDLD FK VND GH GD+LL+DV+ +L C+ LAR GGDEF Sbjct: 303 LDLDRFKLVNDTLGHGVGDRLLQDVADRLLRCVRRGDCLARADEECPPSLVSRLGGDEFT 362 Query: 320 VLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHAD 378 ++ S+ + +A RIL + +P+ + EV+ S S+GI+L P + ++ +IR+AD Sbjct: 363 IMLSDIEHFQDVAKIARRILEAVSVPYSLEGQEVFVSTSIGISLYPFDATTASDLIRNAD 422 Query: 379 TAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVR 437 AMY AKE GR + ++ MN + E + L++ L KAL+ ++ +++YQP+++ + G V Sbjct: 423 GAMYQAKEQGRNGYQIYDESMNAKALERIILESQLHKALKEEEFIVYYQPQVSNQSGRVV 482 Query: 438 SLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVA 496 +EALVRW S E GL+ P F+ AEE GL++ + +WV+ + RQ W D G + +A Sbjct: 483 GIEALVRWNSKELGLVEPGRFLPLAEEIGLVIQIDQWVMREACRQHKLWLDAGFPPVTLA 542 Query: 497 VNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQ 556 +NIS +Q + + VL+E + +++ELTE L+ + E + +Q +G + Sbjct: 543 INISGQQFMKNELLETVTSVLKESGLDPGLLELELTEGVLMAHTERTVKTLQALKGMGVR 602 Query: 557 VHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIA 616 + +DDFGTG+SSLS L RFP+D +K+D+ F+ DI P ++ A + +A + L+VIA Sbjct: 603 LAIDDFGTGFSSLSYLKRFPLDVLKIDRTFINDITTDPDDAAITLATIEMAHTMKLKVIA 662 Query: 617 EGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 EGVE+ + FLTKNG + QG+LF+KP+P+ R + R+ Sbjct: 663 EGVETKPQLDFLTKNGCDMYQGYLFSKPVPSTELPRLFNRW 703 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 330 bits (847), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 201/548 (36%), Positives = 311/548 (56%), Gaps = 10/548 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 + A +V I+I D+ I+ NR + TG +H+V+GQ L R + Sbjct: 379 VQLAAKVFENTVEGIMITDADRRIRSVNRAFTEITGYTQHEVLGQKTSILSSGRHDEPFY 438 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRL--FLFRNKFVHSGSGKNEIFLICSGTDITEER 227 + + G +++ ELW G+ +L N +S I S D+TE + Sbjct: 439 EQMWQSIAEHG-SWQGELWNRRKNGEVYPEWLAINAVRNSLGEITHYVAIFS--DLTERK 495 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYG 285 A ER++ LA+ D +T LPNR MQD ++ AI++A DN ++ ++ LDLD FK VN++ G Sbjct: 496 AADERIQFLAHFDVLTSLPNRIHMQDRVELAIHNAVRDNQRLALLLLDLDRFKTVNESLG 555 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS-RILTRLRLP 344 H GD LL+ + I S + ++LAR GGDEF++L S A+A+ R+ P Sbjct: 556 HSAGDTLLQVAADRIKSVMAPGEMLARQGGDEFIILLPVISDPGEAALAAERVRDVFANP 615 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 + + + S+GI++ P+ G D ++R+AD AMY AK GR + +T ++N R Sbjct: 616 IELHNHVLTITPSIGISVYPDDGRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNARAR 675 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAE 463 E L +++ LR ALE D+ V+HYQP++ G + EAL+RW P GL+ P+ FI AE Sbjct: 676 EILAIESQLRFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAE 735 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNF 522 E G IV +G WVI + RQ+ +WR G+ L +A+N+SA Q + +KQ L+ Sbjct: 736 ERGFIVQIGNWVIAEATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGL 795 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +D+E+TES ++E+ + + I +G ++ +DDFGTGYSSLS L RF D +K+ Sbjct: 796 PGHALDIEVTESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKI 855 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 D+ FVRDI + ++ RAI+ +A+ LN+QV+AEGVE+ ++ FL + G + QG+L A Sbjct: 856 DRSFVRDIPQDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIA 915 Query: 643 KPMPAVAF 650 KP+PA F Sbjct: 916 KPLPADDF 923 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 330 bits (847), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 191/546 (34%), Positives = 307/546 (56%), Gaps = 12/546 (2%) Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF---MSRREAAASRRNN 173 +S A++ D G + N + GL E +++G+ + KL + +RE Sbjct: 303 LSSIGEAVITTDENGTVTFSNYEIQKMLGLSEEEILGKKLDKLLSGLVDKREKVYKIPIE 362 Query: 174 RVFFR-SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQER 232 V R S E +L + T G+RL + + S I + + DITE ++ E Sbjct: 363 EVVNRGSMIKLETDLSLVTPGGRRLVEGTVAPIRNDSDVI-IGTVVALKDITEIKKKDEI 421 Query: 233 LRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGD 290 L + D +TGLPNR+ D + A+ + +N ++ LDLDNFK +ND GH GD Sbjct: 422 LYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNEMCALIILDLDNFKAINDTLGHSVGD 481 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS--QSALEAMASRILTRLRLPFRIG 348 LL+ V+ I L +AR GGDEF+++ A A A RIL + + P+ + Sbjct: 482 MLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQIKDINDATRA-ADRILKKFQQPWILE 540 Query: 349 LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLW 408 E Y + S+GI + P G D I ++ADTA+Y AKE GR + ++T MNQ+V + L Sbjct: 541 GKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGRNNYQLYTESMNQKVLQRLD 600 Query: 409 LDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGL 467 ++ +LR+A+E ++ V+ YQP+I + G++ EAL+RW P+ GL+PP++FI AE+SGL Sbjct: 601 IENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPDYGLMPPMEFIPVAEDSGL 660 Query: 468 IVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCP 526 IV +G WV+ RQ KW + G+ ++VN+SARQ I + ++ Sbjct: 661 IVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQFQRSNIVEVIDRIRSSTGLAPEL 720 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 +++E+TES +++ + V+ Q + G +V LDDFGTGYSSL+ L + PID +K+D+ F Sbjct: 721 LELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYSSLNYLRQLPIDTLKIDKSF 780 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 V+DI +++ + ++++A L+L V+AEGVE+ ++ FL K ++ QG+LF+KP+P Sbjct: 781 VQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLFLKKEKCDKAQGYLFSKPLP 840 Query: 647 AVAFER 652 A E+ Sbjct: 841 AEEIEK 846 >UniRef50_B2UJT5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Ralstonia RepID=B2UJT5_RALPJ Length = 652 Score = 330 bits (847), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 173/455 (38%), Positives = 274/455 (60%), Gaps = 4/455 (0%) Query: 210 GKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--V 267 G ++ S DIT+ R AQ+R+R LA D++TGL NR+A++D ++HA+ N+ V Sbjct: 189 GARPYSVLVSLVDITQIREAQQRIRHLATHDTLTGLLNRSALEDRLEHALALGRRNRSRV 248 Query: 268 GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ 327 V++LDLD FK VND GH FGD LLR+V+ + +C +AR GGDEF+V+ + Sbjct: 249 SVMFLDLDRFKNVNDTLGHQFGDMLLREVAARLQACAREADTVARLGGDEFVVMLESLDA 308 Query: 328 SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEG 387 +A RIL+ + PF I E+Y S+GIA++P G D ++R AD AMY AKE Sbjct: 309 MGTRRVAERILSAIGAPFHIEGQELYLGVSIGIAVAPRDGDDPHTLLRKADAAMYLAKER 368 Query: 388 GRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQ 446 GR F FT +++ RV +++ LR+A + ++ YQP++ R G + +EAL+RW Sbjct: 369 GRNNFQTFTSDLDDRVSRRFRIESGLRRASDRNEFYADYQPRVDVRSGRIVGVEALIRWN 428 Query: 447 SPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLA 505 S + G + P FI AEE+GLIV + RW++ Q+A+WR G+ +LR+++N+S + + Sbjct: 429 SADFGRMMPGQFIQDAEETGLIVEIDRWILRAACDQLARWRRIGLPHLRMSINLSGQAFS 488 Query: 506 DQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTG 565 + +++ L +++E+TE LI +D +++ + +G + LDDFGTG Sbjct: 489 SGKLSDMVRRALSASGLPGDAVELEMTEGILIRDDPSLHALLTELRAMGVSLALDDFGTG 548 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YSSLS L RFPID +K+D+ FV+D+ ++ RAI+ +AQA+ ++ +AEGVES + Sbjct: 549 YSSLSYLHRFPIDTLKIDRSFVQDLPHVAERAAITRAIIMMAQAMGMRTVAEGVESTGQL 608 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 FL + G +E QG+L +P+ A + + +R Sbjct: 609 DFLREVGCDEFQGYLLTRPLEPGAVQNLVRENARR 643 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 330 bits (847), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 191/559 (34%), Positives = 308/559 (55%), Gaps = 37/559 (6%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 V+ A +V+ D+ G + FN G + IG+++ L + N++ Sbjct: 321 VLESAPDPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRNIDFL------PVENVPENKL 374 Query: 176 FFRSGNAYE----VELWIPTCKGQRLFL-------FRNKFVHSGSGKNEIFLICSGTDIT 224 F N + +E + T G+++ + F N GS I + DIT Sbjct: 375 IFEKINCGKTLSGIETYCLTKDGKKVGVNISGAGFFDNHDKLQGS-------IITLQDIT 427 Query: 225 EERRAQERLRILANTDSITGLPNRNAM-----QDLIDHAINHADNNKV-----GVVYLDL 274 E ++ +E ++ LA D +TGL NR + +LI D ++ + +LD+ Sbjct: 428 ERKKTEEEIKFLAYHDVLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGHKWALFFLDV 487 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAM 333 D FK VND GH GD+LL+ V++ + +CL + R GGDEF ++ ++ T + + + Sbjct: 488 DRFKYVNDTLGHDVGDELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMAKV 547 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 A +I + P RI E+Y + S+GI++ P+ G D ++++AD AMY AKE +G + Sbjct: 548 AQKIRKAIARPCRIKDHELYITVSIGISIYPDDGDDVETLVKNADIAMYAAKEENQG-YR 606 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLI 453 F EMN++ E + L+ NLR AL++DQL+I+YQP + ++ +EAL+RW PE GLI Sbjct: 607 FFIEEMNRKTLERMMLENNLRNALQHDQLIIYYQPLVDSTNQIVGMEALLRWHHPELGLI 666 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTA 512 P FI AEE+GLIVP+G+WV+ +Q KW + G VAVN+S RQ + + Sbjct: 667 SPSQFIPLAEETGLIVPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVET 726 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 ++Q+L+ + + +E+TES ++E+ E A++ ++ G +DDFGTGYSSLS L Sbjct: 727 IEQILEATDLPPDCLKLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYL 786 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 RFPID +K+D+ FV D Q +++ I+A+A+ L + +AEGVE+ ++ FL +G Sbjct: 787 KRFPIDTLKIDRSFVIDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHG 846 Query: 633 INERQGFLFAKPMPAVAFE 651 + QG+ F +PMPA FE Sbjct: 847 CHMMQGYYFGRPMPAEKFE 865 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 193/544 (35%), Positives = 305/544 (56%), Gaps = 17/544 (3%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 + V ++ AI+I D+ G I+ N TG + IG+ L R+ Sbjct: 149 RAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKPHILKSGETPPEEYRKLWE 208 Query: 175 VFFRSGNAYEVELWIP---TCKGQRLFLFRNKFVHSGSGKNEI-FLICSGTDITEERRAQ 230 + G E W K L+ +G +I I DITE ++A+ Sbjct: 209 IISGGG-----EWWGEFHNRKKNGELYWASASISPITNGNEQITHFIAFQEDITERKQAE 263 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLF 288 E ++ +A D++TGLPNR+ +L+ A+ H N + V++LDLD FK +ND GH Sbjct: 264 ETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHINDTLGHTV 323 Query: 289 GDQLLRDVSLAILSCLEHDQ-VLARPGGDEFLVLASNTS--QSALEAMASRILTRLRLPF 345 GDQLL+ + + C D+ +AR GGDEF++L + Q A+ +A +I+ F Sbjct: 324 GDQLLQASAHRLKECCRRDRDTVARRGGDEFIILLPDIDDVQEAVR-VAQKIIDAFTQVF 382 Query: 346 RIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 + IE++ S +GI++ P G D+ +I++AD AMY AKE GR ++ ++T M+++ F Sbjct: 383 VLPDIELFISTCIGISIFPNDGRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMDEQAFR 442 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 L ++ +LRKAL+ ++ ++YQPK+ + G++ LEALVRWQ+PE GLI P FI AE+ Sbjct: 443 RLTMENSLRKALQREEFSLYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFIPLAED 502 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFE 523 +GLI+PLG WV+ Q W+ +RVAVN S RQ + ++Q+L E + Sbjct: 503 TGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILGEADLA 562 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 C +++ELTE+ +++N E + + + S LG + +DDFGTGYSSLS + + PI +K+D Sbjct: 563 PCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQTLKID 622 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 + FV DI+ ++ A++ +AQ+L L VIAEGVE+ ++ L E QG+LF+K Sbjct: 623 RSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQGYLFSK 682 Query: 644 PMPA 647 P+P Sbjct: 683 PLPV 686 >UniRef50_A1K2X7 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K2X7_AZOSB Length = 1070 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 185/446 (41%), Positives = 265/446 (59%), Gaps = 10/446 (2%) Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGV 269 + ++C D+TE L A D +TGLPNR + D ++ AI A ++ +GV Sbjct: 619 GDAHVVCVVKDVTERVLYLRELERQAKYDGLTGLPNRYLLDDRLEQAIVAARRHERLLGV 678 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA 329 ++DLD+FK VND GH GD+LLR + + + L AR GGDEF+VL + Sbjct: 679 AFIDLDHFKVVNDNVGHRQGDELLRQAASRLAAVLRDGDTAARQGGDEFVVLLPDLGD-- 736 Query: 330 LEAMASRILTRLRL----PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAK 385 E A RIL RL+ PFR+ + +CS+G++L P G D +++HAD AMY AK Sbjct: 737 -ERDAFRILGRLQAALAEPFRLDDRSFFVTCSIGVSLYPRDGGDGDTLLKHADIAMYQAK 795 Query: 386 EGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVR 444 GR FT EMN +V + L L+ LR ALEN +L + +QP++ G+V EAL+R Sbjct: 796 AAGRNVVRFFTAEMNIQVRDRLQLEGALRSALENGELHLAFQPQVDGGSGQVIGAEALLR 855 Query: 445 WQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQL 504 WQ PE G +PP+ FI AEE+GLI P+G WV+ RQ +W G LR+AVN+SARQ Sbjct: 856 WQHPELGAVPPVRFIPLAEETGLIGPIGEWVLRAACRQARQWEQAGRRLRIAVNVSARQF 915 Query: 505 ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGT 564 + + ++L E +++ELTES L+ + E A ++ + QLG + LDDFGT Sbjct: 916 RSPDLPARIAEILDETGLPPALLELELTESMLMGDAEQAEEMLHRLKQLGVSLALDDFGT 975 Query: 565 GYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE 624 GYSS + L RFPID +K+DQ FVR + +++V AI+A+A +L ++VIAEGVE+ + Sbjct: 976 GYSSFAYLQRFPIDTLKIDQSFVRSMVAGVRGEAIVVAIIALAHSLGMRVIAEGVETPLQ 1035 Query: 625 DAFLTKNGINERQGFLFAKPMPAVAF 650 L + G +E QG+LF +P+PA F Sbjct: 1036 QRQLFEFGCDELQGYLFGRPVPAAEF 1061 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 175/440 (39%), Positives = 270/440 (61%), Gaps = 3/440 (0%) Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKV 280 TDI+ + A++RL LA+ D +T L NR+A+ ++ V+++DLD FK + Sbjct: 310 TDISRRKAAEDRLVFLASHDPLTRLLNRDALFRKLEDICLSGIEQSFAVLFIDLDRFKLI 369 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILT 339 ND++GH GD LLR V+ + + + +LAR GGDEF +L +T Q +A+ MA+R+L Sbjct: 370 NDSFGHATGDNLLRIVAARLSFVVGSNALLARQGGDEFTLLLEDTGQRTAVIDMANRLLD 429 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 L P + E++ + S+GIAL+PEHG D+ ++RHADTA+Y AK+ G+ F FT + Sbjct: 430 ELSQPITLENQELHITASIGIALAPEHGKDAATLLRHADTALYRAKDAGKNTFAFFTHTL 489 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDF 458 + + L L+ LR AL +QL + YQP+I R + +E L+RW PE G + P F Sbjct: 490 HGLSNQRLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLLRWHHPELGQVSPATF 549 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVL 517 I AEE+GLI+P+GRWV+ RQ+A W G ++ VAVN+SA Q D + LK VL Sbjct: 550 IPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGHVAVNLSAHQFNDPGLTHHLKAVL 609 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 + +++E+TES LI N A++++ + +LG ++ +DDFGTGYSSL+QL RFP+ Sbjct: 610 SDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRLSIDDFGTGYSSLAQLKRFPL 669 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D +K+D+ FV I ++ AI+A+A+ L+L V+AEGVE+A + FL + G Q Sbjct: 670 DTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVETADQRDFLARCGSELIQ 729 Query: 638 GFLFAKPMPAVAFERWYKRY 657 G+ ++ P+ A A + + + Sbjct: 730 GYFYSPPLAAEALHSFSRMF 749 >UniRef50_C6MBX5 Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBX5_9PROT Length = 891 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 168/432 (38%), Positives = 276/432 (63%), Gaps = 5/432 (1%) Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVND 282 E + A++R+ +A D++TGLPNR ++D I+ + H ++ V+++DLD+FK +ND Sbjct: 440 EGKEAEKRIIEMATHDALTGLPNRYLLRDRIEQVLVHDTRLQRQMAVLFIDLDHFKTIND 499 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTRL 341 + GH GD LL+ V+ + SC+ ++ +AR GGDEF+V+ ++ ++S A +A +IL Sbjct: 500 SLGHEIGDLLLKAVADRLKSCVRNEDTVARQGGDEFIVVLNSIAESLDAAKVAQKILDSF 559 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 LPF I E++ S+GIA+ P+ G ++ +++++D AMY AK+ GR + FT E+N+ Sbjct: 560 ALPFHIHKNELHIDGSIGIAVFPDDGVNAETLLKNSDVAMYHAKKNGRNNYQFFTDELNK 619 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFIS 460 +E L +LR ALE ++L+++YQP + + +EAL+RW+ PE+ LI P FI+ Sbjct: 620 SAYERHILGLDLRYALERNELLLYYQPVMDMPSHNLYGVEALLRWRHPEQKLITPDKFIN 679 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQE 519 AEE+GLI+P+G WVI V Q+ W+++G + RVA+N+SARQ D+ + + ++L E Sbjct: 680 LAEETGLIIPIGEWVIRTVCLQIKAWQEQGFYVPRVAINLSARQFRDKDLIKNISRILSE 739 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 + I +E+TES LI+N E + + + +G + +DDFGTGYSSLS L +FPI Sbjct: 740 TGVKAKHIALEITESMLIDNIEKVVETLNRLDAMGLHISIDDFGTGYSSLSYLKQFPIHT 799 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ FVRD+ +++V AI+A+A +L ++VIAEG+E ++ FL N QG+ Sbjct: 800 LKIDRSFVRDLVTDKNDRTIVAAIIAMAHSLEMEVIAEGIEIEEQLDFLVTQKCNHYQGY 859 Query: 640 LFAKPMPAVAFE 651 F+KP+ E Sbjct: 860 YFSKPVTVSEIE 871 >UniRef50_A3JAE8 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAE8_9ALTE Length = 828 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 181/445 (40%), Positives = 271/445 (60%), Gaps = 17/445 (3%) Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYG 285 +++ R+ LA DS+TGLPNR + + I+ H ++ ++ V++LDLDNFK+VND G Sbjct: 369 KSRVRVERLAYHDSLTGLPNRFRAHETLRCMISLAHRESRRMAVLFLDLDNFKRVNDTLG 428 Query: 286 HLFGDQLLRDVSLAILSCLEHDQV------------LARPGGDEFLVLASNTSQSALEA- 332 H GDQLL ++++ + L + V LAR GGDEF+VL SN S S A Sbjct: 429 HQVGDQLLMEMAIRLQVVLRAEDVIHQEVSQNTLDVLARLGGDEFVVLLSNVSSSRDAAK 488 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 +ASRIL ++LPF E+Y+ CS+GI+L P GSD +I+ AD AMY AK GR F Sbjct: 489 VASRILDIMKLPFYFNENEIYSGCSIGISLFPSDGSDVDDLIKRADAAMYQAKSQGRNNF 548 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERG 451 ++ N E++ L+ LR+AL+N++LV++YQP + R G++ LEAL+RW P G Sbjct: 549 QFYSASYNLAALEHISLEGRLRRALKNNELVLYYQPLVQARTGKIVGLEALLRWNDPLDG 608 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIF 510 +IPP FI AEESGLI+PLG WV+ + RQ++ W G + V+VN+SA QL Q + Sbjct: 609 IIPPDRFIPVAEESGLILPLGEWVLREAGRQLSTWHAAGFTDACVSVNVSAIQLQRQDLV 668 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 T + QVL++ +++E+TE+ L+ + + + G + LDDFGTGYSSLS Sbjct: 669 TIVDQVLKDNGLRPWQLELEITETALMRIRPEVIGDLNAMRRKGVTISLDDFGTGYSSLS 728 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L PI +K+D+ FVRD+ P ++V A++ +A++L LQ AEGVE+ ++ A L + Sbjct: 729 LLQELPIGKLKIDKSFVRDMLVDPKDAAIVSAVLFIAKSLGLQSTAEGVETPEQAARLAE 788 Query: 631 NGINERQGFLFAKPMPAVAFERWYK 655 G ++ QG+L +P+P + K Sbjct: 789 EGCDQLQGYLLCRPLPVAEMTEFLK 813 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 199/543 (36%), Positives = 321/543 (59%), Gaps = 11/543 (2%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 QVV ++ +A+++ D +GNI+ N TG +V G++ +L S +A R+ Sbjct: 510 QVVEQSPTAVILTDPQGNIEYANPKFTQITGYSLTEVHGKNP-RLLKSGETSAEEYRDLW 568 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKF--VHSGSGKNEIFLICSGTDITEERRAQER 232 +G + E G LF V + +G FL DIT+ +R +E+ Sbjct: 569 TTITAGREWHGEFHNKRKDGS-LFWEHASISPVRNDAGDISHFLAIK-EDITDRKRYEEQ 626 Query: 233 LRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGD 290 L+ LA D++TGL NR +QD ++ +I A + V + LDLD FK +ND+ GH FGD Sbjct: 627 LQHLATHDNLTGLANRALLQDRLEQSILFAKRSGRLVAALLLDLDRFKIINDSLGHSFGD 686 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVL-ASNTSQSALEAMASRILTRLRLPFRIGL 349 +LL+ + + + +AR GGDEF++L A ++ + +A +IL R+ PF+I Sbjct: 687 RLLQIAADRLRESVRGADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITAPFQIAD 746 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWL 409 E+ + S+GI++ P+ G D +IR+AD AMY AKE G F ++ PEMN V E + + Sbjct: 747 REITVTASLGISIYPQDGEDEETLIRNADIAMYQAKEEGNA-FRLYAPEMNIVVHEAMEM 805 Query: 410 DTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 +T+LR+AL+ +L++HYQPKI G++ EALVRWQ P RG+I P FI AEE+GLI Sbjct: 806 ETDLRRALDRGELLLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLAEETGLI 865 Query: 469 VPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPI 527 +P+G WV+ ++ Q+ W+ +G L +A N+SARQ + + ++++LQ+ + Sbjct: 866 LPIGEWVLENICLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTGLPPHLL 925 Query: 528 DVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFV 587 ++ELTES ++ N + A +Q+ + LG + LDDFGTGYSSL+ L RFP+D +K+D+ F+ Sbjct: 926 ELELTESMIMRNVQTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLKIDRSFI 985 Query: 588 RDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 D+ P + ++ +I+A+A +L LQ +AEGVE+ ++ FL + + QG+L++ P+ Sbjct: 986 SDVADDPSAAAVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLYSAPLAV 1045 Query: 648 VAF 650 F Sbjct: 1046 EEF 1048 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 196/547 (35%), Positives = 317/547 (57%), Gaps = 16/547 (2%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL-FMSRREAAA 168 L + QV++ + A+V+ I+ N TG E + + + L + +RE Sbjct: 956 LVLSSQVLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQITDKYLVHLAYKQQRELFN 1015 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR--NKFVHSGSGKNEIFLICSGTDITEE 226 S + + + E+WI + + + ++ N+ + G+ F + TDITE Sbjct: 1016 SIEQQLLRHKH---WVGEIWIRNKQRKAILVWLEINQVIDI-KGETSHF-VAVFTDITER 1070 Query: 227 RRAQERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAY 284 ++A++ LR LA+ D++TGLPNR QD ++HAI H NN V +++LDLD FK +ND+ Sbjct: 1071 KKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRFKHINDSM 1130 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRL 343 GH GD LL+ + + + + +AR GGDEF ++ +++ A ++ ++L + Sbjct: 1131 GHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLRAFQT 1190 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 PF + + S S+GI+L P ++ ++I+ ADTAMY AK GR F +T ++N+ Sbjct: 1191 PFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSLGRNNFQFYTHKLNEIA 1250 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYA 462 ++ L+ L++A+ ++L + YQPK + R G + LEAL+RW E G I P++FI A Sbjct: 1251 TRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALLRWHHTELGPISPVEFIPLA 1310 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQL-ADQTIFTALKQVLQEL 520 EE+G+I +G WVI +Q+A+W G N + +AVN+SARQL AD I + ++ L Sbjct: 1311 EETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSARQLKAD--IISTIEVALAVS 1368 Query: 521 NFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAI 580 +++ELTES ++ N + ++S++ + LG + +DDFGTGYSSLS L RFPID + Sbjct: 1369 GLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGTGYSSLSYLKRFPIDTL 1428 Query: 581 KLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFL 640 K+D+ FVRDI P ++ AI+A+A +L L V+AEGVE+ + FL G +E QGFL Sbjct: 1429 KIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQLNFLGLQGCDEVQGFL 1488 Query: 641 FAKPMPA 647 +KP+ A Sbjct: 1489 LSKPLSA 1495 >UniRef50_B3EBJ4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3EBJ4_GEOLS Length = 693 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 192/504 (38%), Positives = 310/504 (61%), Gaps = 7/504 (1%) Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G+ E ++G+ + + S +A R+ + Y E+ T G R + K Sbjct: 159 GIDEEQLVGRELCPIINSSGQAVMKEAMQRLDCHPKSCYH-EICSQTLDGLRWIGWAMKG 217 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN 264 V G E ++ G DIT+ ++A++ + LA+ D++TGLPNR+ +QD + A++ A+ Sbjct: 218 VVDEKGHIEA-IVGIGRDITDRKKAEQEILQLAHYDTLTGLPNRSLLQDRLSQALSLANR 276 Query: 265 NKV--GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 V V++LDLD FK VNDA+GH GD LL++VS + C+ ++R GGDEF+++ Sbjct: 277 GNVTLAVLFLDLDRFKHVNDAFGHQIGDLLLQEVSRRLKDCVRATDTVSRIGGDEFVIIL 336 Query: 323 SNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 +N + S ++A++I++ + F++G E+Y+ S+GIAL P G+D +++HAD AM Sbjct: 337 TNLIKCSQAGSIAAKIISSMSRLFQLGGHELYSGTSIGIALYPTDGNDVDTLLKHADMAM 396 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLE 440 Y AK GRG F F+PE N+++ + + L+ LR+A+E+ +L + YQP+I + G + LE Sbjct: 397 YQAKASGRGTFKFFSPEHNEKMLQRMQLEQALRRAIEHQELSLDYQPQIDSATGSINGLE 456 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNI 499 AL+RWQ P+ GL+ P FI+ AEE+GLI+PLG WV+ RQ W+ G + LR+AVNI Sbjct: 457 ALLRWQHPQLGLLLPGLFITIAEETGLIIPLGEWVLRTACRQARAWQRAGYHRLRIAVNI 516 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 S RQ + + + +LQE + +++ELTE+ L+++ + A ++++ + G + + Sbjct: 517 SPRQFQQRGLIPMIDAILQETGCDPRGLELELTETTLMDSPKEATALLKALKRRGISLAI 576 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSLS L FPID +K+D+ FV D+ + ++V AI+A+A L L+V+AEGV Sbjct: 577 DDFGTGYSSLSHLKHFPIDRLKIDRSFVNDLTRSREDSAIVEAIIAMAHRLGLEVVAEGV 636 Query: 620 ESAKEDAFLTKNGINERQGFLFAK 643 E + A L+ G QGFL++K Sbjct: 637 EHPDQHAILSDWGCKTCQGFLYSK 660 >UniRef50_Q30P04 Diguanylate cyclase/phosphodiesterase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30P04_SULDN Length = 770 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 155/421 (36%), Positives = 270/421 (64%), Gaps = 4/421 (0%) Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGH 286 A L L+ D +T LPN+ + D ++H+IN A N KV +++LDLD FK++ND Y H Sbjct: 337 AANELEHLSRHDHLTNLPNKTLLIDRLEHSINVASKNGQKVSILFLDLDRFKEINDTYNH 396 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFR 346 GD+LL+D+S + ++ + + R GGDEF+++ +N++++ + + I++ + PF Sbjct: 397 EVGDKLLQDISRRLKKLIKEEDTIGRFGGDEFIIILNNSNETQTVEVVTNIMSAMSEPFN 456 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 + ++++T+ S+GI++ P+ G+ +IR+ADTAMY AK G+ ++ + +M + FE Sbjct: 457 VNKVKLHTTFSIGISIFPDDGNSRDILIRNADTAMYEAKSNGKNRYQFYDKKMTELAFER 516 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEES 465 L++NLRKA++N++ +++QPKI R +V LEAL+RW PE GLIPP+ FI +AE Sbjct: 517 TTLESNLRKAIQNEEFEVYFQPKIDARVDKVIGLEALIRWNHPELGLIPPVKFIPFAENI 576 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEY 524 GLI+ + RW++ + QV W+ + I ++++N+SA+QL D L Q + ++ + Sbjct: 577 GLIIEIDRWMMREAAAQVLLWKKENIVCGKLSINVSAKQLEDDNYVEFLSQKINDIGIDP 636 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 +++E+TE ++++ S + +LG + +DDFGTGYSSLS L R PID +K+D+ Sbjct: 637 KDLEIEITEGLIMKHSLHVTSTLNAIRELGISISVDDFGTGYSSLSYLKRLPIDKLKIDR 696 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 FV+D+ ++V+ I+A+A L+L++IAEGVE+ ++ FL G + QG+ ++KP Sbjct: 697 SFVKDLPHDKDDIAIVKTIIALANNLSLELIAEGVETKEQRDFLLSEGCHNIQGYFYSKP 756 Query: 645 M 645 + Sbjct: 757 L 757 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 201/558 (36%), Positives = 300/558 (53%), Gaps = 27/558 (4%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV-----------FK 158 L A +V A AI I DS GNI N TG +VIG++ F Sbjct: 950 LRLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQEVIGKNPRFLQSGKHGKDFY 1009 Query: 159 LFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLIC 218 M R +F R N W+ T R +GS N + + Sbjct: 1010 DAMWRSLIEQGCWQGEIFNRRKNGEIYPEWL-TVNSVR--------DENGSVVNYVAIF- 1059 Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDN 276 +DI+ + +Q R+ LA D +TG+PNR+ + D + HA+ A K+ V+++DLDN Sbjct: 1060 --SDISAIKSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDN 1117 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASR 336 FK +ND+ GH GDQLL+ + + C+ LAR GGDEF+ + ++ S + ++A+R Sbjct: 1118 FKVINDSLGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEKVNSVAAR 1177 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 I+ L F I ++ S S+GI++ P+ G DS +++HADTAMY AKE GR Q+ F Sbjct: 1178 IVDFLGASFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQYQFFA 1237 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPP 455 EM + L L+T LR ALE + YQP++ GEV EAL+RW+ P G + P Sbjct: 1238 DEMKVIALQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLGEVSP 1297 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALK 514 FI AE GLI +G V V+ Q+A WR+KG+ + R+A+N+SA QL D + Sbjct: 1298 AHFIPIAESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAGFAAKVG 1357 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 L I +ELTES L+E ++ ++ F +G +V +DDFGTGYSSLS L + Sbjct: 1358 SWLDSSGISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLSYLKK 1417 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 PI +K+D+ FV I + +S+ +AI+ +++AL ++V+AEGVES ++ L + G + Sbjct: 1418 LPIHELKIDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKEEGCD 1477 Query: 635 ERQGFLFAKPMPAVAFER 652 QG+LF +P+ AF + Sbjct: 1478 MVQGYLFHRPLSPEAFAK 1495 >UniRef50_C6XAG8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAG8_METSD Length = 950 Score = 329 bits (843), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 184/487 (37%), Positives = 288/487 (59%), Gaps = 12/487 (2%) Query: 177 FRSGNAYEVELWIPTCKGQRLFL-FRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + G++++ EL I TCK + L++ + V+ G N + + DI+ ++ A+ R++ Sbjct: 456 LQKGDSFDEELPILTCKDKLLWIRIIGQAVYDLHG-NITRIEGAIQDISAQKVAESRIQH 514 Query: 236 LANTDSITGLPNRNAMQDLIDHAINH-ADNNKVG-VVYLDLDNFKKVNDAYGHLFGDQLL 293 LA DS+T LPNR D ++H + + A +K G V+++DLDNFK +ND GH GD LL Sbjct: 515 LAFYDSLTSLPNRQLFIDRLEHTLAYSARTSKSGAVLFIDLDNFKTLNDTMGHDLGDMLL 574 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVL----ASNTSQSALEA--MASRILTRLRLPFRI 347 + V++ I CL +AR GGDEF+VL + N ++A +A ++ +IL PF+ Sbjct: 575 QQVAMRIAGCLRESDTVARFGGDEFVVLLHELSGNHQEAAAQARLVSEKILISFAHPFQF 634 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 E +TS S+G+ L + + I++ AD AMY +K GR F PEM + + + Sbjct: 635 SGYEHHTSASIGVTLFDQQPTTVDEILKRADLAMYQSKAAGRNVIRFFDPEMQALIADRV 694 Query: 408 WLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGL 467 ++ +LR L ND+ + YQP++ +G + EAL+RW++P+RG+IPP FI AE+SGL Sbjct: 695 EMEEDLRNGLRNDEFFLCYQPQVDNQGRLLGAEALLRWRNPKRGMIPPSTFIPLAEDSGL 754 Query: 468 IVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 IV +G WV+ +Q+ W + + +L +AVN+SA+QL + +VL Sbjct: 755 IVSVGNWVMYAACKQLVLWAQQPLTSSLTLAVNVSAKQLRQMDFVDQIVEVLNVTGANPK 814 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 + +ELTES ++ N E ++ + + +G +DDFG GYSSLS L P+D +K+DQ Sbjct: 815 RLKLELTESLMVNNIEDVIAKMTELKNIGVGFSIDDFGIGYSSLSYLKLLPLDQLKIDQS 874 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 FVRD+ P + R I+A+ ++LNLQVIAEGVE+ + FL G + QG+LF+KP+ Sbjct: 875 FVRDVLTDPNDAVIARTIIALGKSLNLQVIAEGVETLSQREFLDNYGCDAYQGYLFSKPV 934 Query: 646 PAVAFER 652 PA FER Sbjct: 935 PADEFER 941 >UniRef50_C1DJP1 Cyclic di-GMP signal transduction protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DJP1_AZOVD Length = 1104 Score = 329 bits (843), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 204/555 (36%), Positives = 311/555 (56%), Gaps = 13/555 (2%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 R L +A+ V++ D ++R+NR E TG K ++ G F Sbjct: 546 RQLRQERDYADAVLNSLPGVFYHYDENVRLRRWNRNLERITGYKSEELAGVEPTIFFADE 605 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRL-FLFRN-KFVHSGSGKNEIFLICSGT 221 +A + R VF + ++ E + + GQR+ +LF +F + G + G Sbjct: 606 DKALVASRIGEVFEKGESSVEADYLLK--DGQRIPYLFTGVRFEYDGRRG----FVGVGY 659 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKK 279 DI+E +RA++R+R LA D +T LPNRN +Q+ I+ AI A + ++YLDLD FK Sbjct: 660 DISERKRAEQRIRHLAMHDGLTDLPNRNLIQERIEQAIVRARRGGRLLALLYLDLDRFKV 719 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRIL 338 +ND YGHLFGD +L+ S +L + +AR GGDEFL+L ++ Q A +A+A +I+ Sbjct: 720 LNDGYGHLFGDAVLKTASERLLKLVREGDTVARLGGDEFLILLADLEQPADADAVARKIV 779 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L P + +++ S S+G++L P G + +I +AD AMY AKE GR + FT Sbjct: 780 GSLDCPIVVQERKIHLSGSIGVSLFPRDGETADELIDNADMAMYRAKELGRNTYQFFTRA 839 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 M+ + L+ LR A QL + YQPK++ G + EAL+RW PE G++ P Sbjct: 840 MSLETQRRVDLEIKLRGAATAGQLQLVYQPKVSLENGGISGCEALLRWHHPELGIVSPEH 899 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQV 516 FI AE+SGLIVP+G WV+ Q W D G+ + VAVN+S RQ Q + + + Sbjct: 900 FIPIAEDSGLIVPIGDWVLRTACMQARAWMDAGLPPVCVAVNVSTRQFLQQDVVAWVTRT 959 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L+E +++ELTES + + E + I Q +G ++ +DDFGTGYSSL+ L RF Sbjct: 960 LRETGLPAARLELELTESLIARDIEKVTATIDQLKDIGVKLSIDDFGTGYSSLNYLKRFR 1019 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 +D +K+DQ FVR++ + +++V A++A+A L +VIAEGVE+ + FL NG +E Sbjct: 1020 VDTLKIDQSFVRNMLTEMEDETIVLAVIALAHNLKFKVIAEGVETEQHSRFLCSNGCDEI 1079 Query: 637 QGFLFAKPMPAVAFE 651 QG F++P+ A AFE Sbjct: 1080 QGHYFSEPVTAEAFE 1094 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 329 bits (843), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 174/450 (38%), Positives = 266/450 (59%), Gaps = 6/450 (1%) Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDL 274 +C+ DIT+ + ++ R+R LA D +T LPNR + + A+ A KV V+++DL Sbjct: 605 VCTSIDITDRKESERRIRFLAEHDVLTELPNRALCIERLRLALQQARRTGQKVAVLFIDL 664 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS--QSALEA 332 D FK +ND+ GH GD LLR V+ ++ + ++R GGDEF+V+ + + + Sbjct: 665 DRFKNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFVVVLNGLADIEEVAHV 724 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 + R++ R+R P + E++ SCSVGI++ P+ D ++R AD AMY AK GR Sbjct: 725 VEQRLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMYQAKAQGRNGA 784 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERG 451 FT EMNQR L ++ +LR A+ QL +HYQP+I G V +E L+RW SPE G Sbjct: 785 QFFTAEMNQRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVEGLLRWHSPELG 844 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIF 510 +PP FI AEE+GLI+ +G WVI Q+ +WR +G+ + V++N+SA QL D + Sbjct: 845 HVPPDRFIPVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVAVSINLSALQLRDPGLL 904 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 L+ L+ +++ELTES L++ + L + +LG ++ +DDFGTGYSSL+ Sbjct: 905 DVLRASLERHAVPPGQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYSSLN 964 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L RFPID +K+D+ FVRD+ P ++++AI+ + L L+V+AEGVE E L Sbjct: 965 YLTRFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQALRA 1024 Query: 631 NGINERQGFLFAKPMPAVAFERWYKRYLKR 660 G +E QG+ FA+PM A W +++R Sbjct: 1025 AGCDELQGYHFARPMAADTATAWLLDWIRR 1054 >UniRef50_Q3JAB6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Nitrosococcus oceani RepID=Q3JAB6_NITOC Length = 700 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 179/529 (33%), Positives = 298/529 (56%), Gaps = 7/529 (1%) Query: 124 IVILDSRGNIQRFNRLCEDYTG-LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 + I+D G I N+ + G +K++ G S+ + + R G Sbjct: 161 VAIMDLEGRIHYMNQAGRQWLGFIKKNHYAGASLLAHYPLWTASLIRDTAIPAALREG-V 219 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 +E E I G + + + H + FL DI+E + ++ L+ D++ Sbjct: 220 WEGEAVILNPSGGEIPVSQVILSHRNALNQVEFLSTIARDISERKHYEQELQYRVTHDTL 279 Query: 243 TGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 T LPNR ++D + + HA N+ V++LD+DNFK++ND GHL GD+ LR ++ + Sbjct: 280 THLPNRILLRDRLIQVLAHAKRNQRLTAVLFLDVDNFKQINDGLGHLTGDKCLRTLAHHL 339 Query: 301 LSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 C+ L R GGDEFL++ S+ S S +E + +I + P ++ +V+ + S+G Sbjct: 340 AGCIRESDTLGRYGGDEFLIILSDLRSYSDVETLIKKIRATVSQPLKLNNNDVFITLSIG 399 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 ++L P+ G D A+++ AD AM+TAK GQ + PEMN R E L L+T+L +ALE Sbjct: 400 VSLYPQDGDDEEALLKTADAAMHTAKHSSPGQCRYYRPEMNVRGSELLALETDLHRALER 459 Query: 420 DQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 ++ V++YQP++ G++ ++EAL+RWQ P RGL+ P DFI E++GLI +G+W + Sbjct: 460 EEFVLYYQPQLDVTTGQITAVEALIRWQHPNRGLVSPRDFIPLLEQTGLIEEVGKWGLNT 519 Query: 479 VVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 RQ W +G +R+AVN SARQ Q + Q+LQ+ + + +++E+TES +++ Sbjct: 520 ACRQAKAWHSQGYPIRMAVNCSARQF-QQHFLDIVHQILQKQSLDPAYLELEVTESVVMQ 578 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 + + A ++Q+ ++G + +DDFGTGYSSL+ L RFPI ++K+D FVRD+ K + Sbjct: 579 DTQSATYILQRLKEMGVTLAIDDFGTGYSSLAYLKRFPIHSLKIDCSFVRDVTKNEEDAA 638 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 + I+ + +L L+V+AEGVE+ + F + QG+ +PMPA Sbjct: 639 IAETILLLGNSLGLEVVAEGVETEAQMRFFQDRHCHRIQGYWIGRPMPA 687 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 329 bits (843), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 193/585 (32%), Positives = 329/585 (56%), Gaps = 42/585 (7%) Query: 99 TPAVARDLSHGLSFAEQV-------VSEAHSAIVILDSRGNIQRFN-RLCEDYTGLKEHD 150 T V RD++ G AE++ V ++ + I + D+ G I N + C+ TG + + Sbjct: 282 TVGVIRDIT-GSKHAEEMICTLSLAVEQSPAMIAVTDTDGRIDYINPKFCK-VTGFEPEE 339 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIP-TCKGQRLFLFRNKFVH--- 206 V+G+++ + E+ + LW T KG+ F ++ H Sbjct: 340 VLGKNLIDIIQPGGESLSMADKT-------------LWKAITSKGEWKEAFSSRKKHGEL 386 Query: 207 -------SGSGKNEIFL---ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLID 256 S NE F+ + DITE ++A+ER+ LA DS+T LPNR D ++ Sbjct: 387 FWTSLSLSAIKSNEGFISHYLAIMEDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLN 446 Query: 257 HAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPG 314 AI HA + + V ++D+D FKKVND GH GD+LL+ ++ + SC+ + ++R G Sbjct: 447 MAIIHAHRKQQMLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQG 506 Query: 315 GDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAI 373 GDEF++L + S+ + RIL +L+ P I ++ S S+GIAL P G+ + A+ Sbjct: 507 GDEFVLLLTEISRMEDANDVTQRILKKLKEPVIIDDHDLCISASIGIALYPGDGTTAEAL 566 Query: 374 IRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW- 432 +++AD+AMY +KE GR + ++ + ++ +E L + LR+ALEN +LV++YQP++ Sbjct: 567 LKNADSAMYISKESGRDNYHFYSSTVQEKAYEQLLEEMYLRRALENRELVLYYQPQVNIA 626 Query: 433 RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI- 491 G + +EAL+RW+ P++GLI P +FI AE++G IVP+ WV+ +Q W+ G+ Sbjct: 627 TGRLVGMEALLRWKHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQNMAWQRAGLP 686 Query: 492 NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFS 551 ++ +AVNIS + + + VL + +D+E+TE I+N + + + + Sbjct: 687 SVPIAVNISGHTFGRENLIDFVNNVLHDTRMSPDALDLEITEGIAIQNLQTTIYKLNKLK 746 Query: 552 QLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALN 611 LG Q+ +DDFGTG+SSLS L++FPI +K+ F+ ++HK P + ++V+A++A+A++L Sbjct: 747 SLGIQITIDDFGTGFSSLSYLSKFPIQKLKIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQ 806 Query: 612 LQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 L VIAEGVE+ ++ FL +E QG+L +K + + R+ + Sbjct: 807 LTVIAEGVETDEQFEFLQGLQCDEFQGYLCSKAVTSEEMGRFLAK 851 >UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=A3Q8W6_SHELP Length = 1094 Score = 328 bits (842), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 207/606 (34%), Positives = 328/606 (54%), Gaps = 13/606 (2%) Query: 62 SSLMMSLTVD-ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 +SLM + + + LSV + GR E A A A + + ++ + LS A V Sbjct: 487 ASLMQRMAQNTQLQLSVPVDGRD----EVAKMAMALNAMLSERQEANRELSLASAVFEYC 542 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 IV+ D I+ N TG +V G+S + S ++ + Sbjct: 543 AEGIVVTDKDNLIEAVNPAFTQITGYTLEEVKGRSP-AVLNSHQQPHHFYEQMWQSLKQY 601 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 ++ E+W GQ + V + I DI+ ++ ++ + +N D Sbjct: 602 GKWQGEIWNKRKNGQIFPEYLAITVVKDDKGRVVQHIGLFLDISNRKKYEQDIWYKSNYD 661 Query: 241 SITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSL 298 ++T LPNR + + A+ V V+++DLD FK +ND YGH GD+LL+ + Sbjct: 662 ALTNLPNRQLYTSRLSQMLQLAEQRCCSVAVLFIDLDRFKYINDIYGHAVGDELLQVAAA 721 Query: 299 AILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCS 357 + + LE +AR GDEF+V+ +T Q +E A IL L PF I E+ S S Sbjct: 722 RLEALLEQHDFVARLSGDEFVVVMGHTKHQGEIEQRAQNILQHLSSPFGINRNELLISAS 781 Query: 358 VGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKAL 417 VGI+ P +G+ + R+A+TAMY AK+ GR F F+P+MN + + L+ +LR A+ Sbjct: 782 VGISCYPSNGTSVEVLTRNAETAMYQAKQDGRNCFGYFSPDMNNNMLARITLEQSLRSAV 841 Query: 418 ENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVI 476 + +HYQP + T GE +LEAL+RW+ P+RGL+PP +FI AEE+GLI P+G WVI Sbjct: 842 LQHEFCLHYQPIVDTSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEETGLIEPIGEWVI 901 Query: 477 LDVVRQVAKWRDKGINLRVAVNISARQLA--DQTIFTA-LKQVLQELNFEYCPIDVELTE 533 +R + + +GI + +A+N+S RQLA D + F L +LQ+ + + +E+TE Sbjct: 902 QQALRDLRQCHSQGIMINMAINVSGRQLAHGDPSHFACMLNGLLQKYDVAPQYVHIEITE 961 Query: 534 SCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQ 593 S L+ + EL+L + LG +++LDDFGTGYSSLS L +FPI IK+D+ FV ++ + Sbjct: 962 SILMADTELSLKALTAIRHLGVEIYLDDFGTGYSSLSYLKQFPISVIKIDKSFVDNMLED 1021 Query: 594 PVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 +L++AI+ + Q+L+++++AEGVES + +FL G + QG+L AKPMP E Sbjct: 1022 RADANLIKAIITMGQSLDMRLVAEGVESEPQRSFLQGLGCDFVQGYLVAKPMPLKELEPL 1081 Query: 654 YKRYLK 659 +R ++ Sbjct: 1082 LRRIVR 1087 >UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZMU9_PSEU2 Length = 972 Score = 328 bits (842), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 167/429 (38%), Positives = 265/429 (61%), Gaps = 10/429 (2%) Query: 225 EERRAQERLRILANTDSITGLPNR----NAMQDLIDHAINHADNNKVGVVYLDLDNFKKV 280 E A+++L LA DS+T LPNR N ++++I + D V V+++DLD FK V Sbjct: 521 ERYDAKKKLTYLAENDSLTHLPNRWFLSNYLREIISRKTSAPD--AVSVIFIDLDRFKAV 578 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT--SQSALEAMASRIL 338 ND GH GDQLL + C+ + V+AR GGDEF ++ +++ S+S ++++A+ ++ Sbjct: 579 NDTMGHSVGDQLLIQAGRRLKDCIGENSVVARLGGDEFSIVVTHSVYSESLIKSLATHVV 638 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L PF +G +++ S SVGIA P G D+ I+++ADTAMY AK+ GR F + Sbjct: 639 EALGKPFNLGGQDIFVSASVGIANYPFDGRDTGVILKNADTAMYQAKKSGRNNFKFYNAR 698 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 MN+ + L +T LR ALE D+ ++H+QPK++ G + LEAL+RW PE+G++ P D Sbjct: 699 MNESLTRRLQTETLLRGALERDEFILHFQPKVSLTDGRISGLEALLRWNHPEQGMVSPAD 758 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQV 516 FI E++GLI+P+G WVI V + +W + I L +A+N+S RQL + + +K + Sbjct: 759 FIPILEDTGLIIPVGVWVIRKVCETLKRWEENHIRLVPIAINLSVRQLQVKGLAETVKHI 818 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 ++ ++ ELTES L+ + E A+ +++ G + +DDFGTGYSSL+ L RFP Sbjct: 819 VEAYGINPALLEFELTESMLMIDPESAVEILRDIKSYGISLSVDDFGTGYSSLAYLKRFP 878 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 +DA+K+D+ F++DI ++ RA++ +A L L VIAEGVE+ + L G ++ Sbjct: 879 LDALKIDRAFIKDITSNHEDAAITRAVIVLAHELGLNVIAEGVETVDQLELLVTYGCDQM 938 Query: 637 QGFLFAKPM 645 QG+LF+KP+ Sbjct: 939 QGYLFSKPV 947 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 328 bits (841), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 204/563 (36%), Positives = 309/563 (54%), Gaps = 33/563 (5%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A V S + I + D +G+I N T + +V+G++ L S Sbjct: 749 LLLASAVFSNSMEGIFVTDLKGSILAVNPAFSQITLYEAAEVLGRNARIL--------QS 800 Query: 170 RRNNRVFF-------RSGNAYEVELWIPTCKGQ------RLFLFRNKFVHSGSGKNEIFL 216 R NR F+ + ++ E+W G+ + RN H G N I + Sbjct: 801 GRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLSISSVRN---HQGEVTNYIGI 857 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDL 274 +D++ + ++ + LA+ D +TGLPNR ++ +DHAI A + V++LDL Sbjct: 858 F---SDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERARRTGGRCAVLFLDL 914 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAM 333 D FK +ND+ GH GD LLR + + +CL LAR GGDEF+ + + A+ + Sbjct: 915 DRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVAVIEDIDGIPAVGTI 974 Query: 334 ASRILTRLRLPFRIGL-IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 A +L RLR P R+ EV SVGI+L PE G + +++HADTA+ K G G + Sbjct: 975 ALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHADTALGQVKGAGGGAY 1034 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG 451 +T + +R+ L L+ LR ALE ++HYQP I GEV +EALVRW + Sbjct: 1035 GFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVEGVEALVRWAGGDGL 1094 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRV-AVNISARQLADQTIF 510 LIPP FI AE++GLIVPLG WV+ + R + +WR +G+ L V AVN+S RQ D I Sbjct: 1095 LIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLAVNLSPRQFRDHAIP 1154 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 +++VL++ +++E+TES ++E A + + LG ++ +DDFGTGYSSL+ Sbjct: 1155 ALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVRLAIDDFGTGYSSLA 1214 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L RFPID IK+DQ FVRDI + ++ + I+A+ + L L V+AEGVE+ + FL++ Sbjct: 1215 NLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLAEGVETTDQLDFLSR 1274 Query: 631 NGINERQGFLFAKPMPAVAFERW 653 + QG+LF++P+ A A E+W Sbjct: 1275 KQCDSAQGYLFSRPITAAALEKW 1297 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 328 bits (841), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 197/548 (35%), Positives = 305/548 (55%), Gaps = 31/548 (5%) Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 EA ++I D I R N+ TG +V+G++ L AS R++ F++ Sbjct: 467 EAQEGMLITDRHNVIMRVNQAFTSITGYLAEEVLGKNPCFL--------ASGRHDAGFYQ 518 Query: 179 S-------GNAYEVELWIPTCKGQRLFLFRNKFVHSGSG--KNEIF-LICSGTDITEERR 228 S +E E+W G+ ++ + S KNE+ + + DIT + Sbjct: 519 SMWEGLNEKGKWEGEVWNRRKDGE---IYPEYLLISAVKDIKNEVANYVATFRDITANKA 575 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAI-NHADNNKVG-VVYLDLDNFKKVNDAYGH 286 A+ ++ LA D +T LPNR + D ++HA+ + A N +G ++++DLDNFK +ND GH Sbjct: 576 AESEIKKLAFYDPLTLLPNRRLLTDRLNHALASSARNRNIGALLFIDLDNFKTLNDTLGH 635 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA------MASRILTR 340 GD LL+ V+L + SC+ D LAR GGDEF+V+ N S+ A++A + +IL Sbjct: 636 DMGDALLKQVALRLKSCIREDDTLARLGGDEFVVILENLSELAMDAATKAELIGEKILAA 695 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 L + + E + + S+G+ L H +++ AD AMY +K+ GR F + Sbjct: 696 LNQVYPLASQEYHGAASIGVTLFAGHALSIDELMKQADIAMYQSKKSGRNTLRFFDLDTQ 755 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFIS 460 + + E L+ LRKA++ QL +HYQ ++ G S EAL+RW P RGLI P FI Sbjct: 756 KIINERAELEIELRKAVDKKQLHLHYQIQLNSVGTPLSAEALIRWVHPVRGLISPAHFIP 815 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQ 518 AE++GLI+P+G+WV+ Q+ W+D+ +L +AVN+SA+Q + +K+ +Q Sbjct: 816 LAEDTGLILPIGQWVLDTACAQLHSWQDERFTQDLTLAVNVSAKQFHQKNFVALVKETVQ 875 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 + +ELTES L+EN E + + ++G Q LDDFGTGYSSL L R P++ Sbjct: 876 RHAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLDDFGTGYSSLQYLKRLPLN 935 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+DQ FVR++ +++VR IVA+A++LNL VIAEGVE+ ++ L G N QG Sbjct: 936 QLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVETEEQHTLLQDIGCNYYQG 995 Query: 639 FLFAKPMP 646 +LF KPMP Sbjct: 996 YLFGKPMP 1003 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 328 bits (841), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 202/562 (35%), Positives = 314/562 (55%), Gaps = 27/562 (4%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A V A++I D NI N D TG DV G++ S Sbjct: 341 LQQAAVVFDAIREAVIITDDARNIVAVNNAFTDITGYTLDDVYGRNP--------RLQQS 392 Query: 170 RRNNRVFFRS-------GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 R+++ F+RS ++ E+ G+ ++N V N + +D Sbjct: 393 GRHDKTFYRSLWRSITEHGHWQGEIENKRRNGEIYPAWQNINVVYDKNGNVANYVSVFSD 452 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKV 280 I+ + +++LR LAN DS+TGLPNR + +++++ A + V ++++DLD FK + Sbjct: 453 ISVIKEKEKQLRHLANHDSLTGLPNRLLFFNSLENSLERARRRRMEVALMFIDLDRFKII 512 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA---SNTSQSALEAMASRI 337 ND GH GD LL+ V+ +L + + ++AR GGDEF + SNT +A A A ++ Sbjct: 513 NDTMGHEAGDILLKTVARRLLEAVRGEDMVARLGGDEFTISLEELSNTEDAA--AKAGKL 570 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 + +R P IG E+ S S+GIA+ P ++ + R AD AMY AKE R F +T Sbjct: 571 IETIRQPVHIGGHEIVCSASIGIAIFPHDADNAQNLARAADAAMYRAKELHRNTFEFYTS 630 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPL 456 E+ +R E+L L + +R+ALE ++ ++YQP+ G + E L+RW+ P RGLI P Sbjct: 631 ELTERAIEHLTLSSEMRQALERNEFELYYQPQFNLTSGRLVGAETLLRWRHPTRGLITPY 690 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQ 515 FI+ AE+S LI P+G WVI + R VA W G+ L R+A N+S++QL + ++ Sbjct: 691 CFINIAEDSALIDPIGGWVINQLCRDVAGWLKGGLKLPRIAFNVSSKQLEHYDVKGRIEH 750 Query: 516 VLQELNFEYCPIDVEL--TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 LQ E +D+EL TE L +++E ++ V++Q LG V +DDFGTGYSSLS+L Sbjct: 751 ALQRWGLEPSDLDLELEVTEGAL-QHEERSVEVLRQVRLLGLSVAIDDFGTGYSSLSRLK 809 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 PID +K+D++F+RD+ P +Q+L I+ + +AL L+V+AEGVE+ ++ FL + Sbjct: 810 HMPIDTLKIDRMFIRDLPDDPNNQALASGIILLGRALGLKVVAEGVENVEQLRFLQERNC 869 Query: 634 NERQGFLFAKPMPAVAFERWYK 655 +E QGFL +KP+P AFE+ K Sbjct: 870 DEAQGFLLSKPLPKAAFEKMLK 891 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 328 bits (841), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 191/548 (34%), Positives = 311/548 (56%), Gaps = 10/548 (1%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ---SVFKLFMSRREAAASRR 171 + + ++ S+++I D + I+ NR TG ++IG+ S+ + EA + Sbjct: 263 KAIDQSPSSVLICDRQWRIEYANRKFSQLTGNSPSEIIGKHPSSLIDPGVDSHEARQLWK 322 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLF-LFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 + R+ + ++ E+ G+R + + +G++ +LI G DI+ +R + Sbjct: 323 SIRLQVQRVGVWQGEVNSTRKNGERYWEQLVVTPIKDNNGESTGYLIL-GEDISIRKRYE 381 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLF 288 ++L AN D +TGLPNR D + A+ A D +KVGV++LDLDNFK +ND GH Sbjct: 382 QQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKHINDTLGHDA 441 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLV-LASNTSQSALEAMASRILTRLRLPFRI 347 GD LL + + I SCL +AR GGDEFLV L A +A RIL PF + Sbjct: 442 GDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERILKTFAPPFML 501 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 EV+ + S+GIA P+ +S +++HAD AMY AK G+ + FTPEM++ E L Sbjct: 502 SGQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAKHKGKSAYARFTPEMSEVSHERL 561 Query: 408 WLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 +++++RKALE + +++QP + T G + + EAL+RW +P G++ P FI AEE+G Sbjct: 562 QMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMPDRFIPLAEETG 621 Query: 467 LIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 LI+P+G WV+ + + W+ G + +AVN+S RQ D A+ + L + N Sbjct: 622 LIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALNDSNLRPE 681 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 +++E+TE +++N +++Q ++G ++ +DDFGTGYS+LS L +P D +K+D+ Sbjct: 682 LLELEITERLILDNSIETADILKQLDKVGIRLSVDDFGTGYSALSYLKSYPFDTLKIDKS 741 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 FV+D+ K+ SLVRAI+ +A +L L+V+AEGVE FL + QG+ +++P+ Sbjct: 742 FVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYSQGYFYSRPL 801 Query: 646 PAVAFERW 653 P F W Sbjct: 802 PEQDFIHW 809 >UniRef50_Q1JW23 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW23_DESAC Length = 951 Score = 328 bits (841), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 174/443 (39%), Positives = 274/443 (61%), Gaps = 13/443 (2%) Query: 222 DITEERRAQERLR-------ILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYL 272 D+T +++A+ERL ++N DS+TGLPNR QD + HAI A ++++ V+++ Sbjct: 508 DLTRQQQAEERLEEKKQLLDHMSNHDSLTGLPNRRLFQDRLYHAIERARRSSSEMSVLFI 567 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA 332 DLD FKK+ND+ GH GD+LL V+ + S L LAR GGDEF+V+ +S S A Sbjct: 568 DLDRFKKINDSLGHELGDKLLISVARRMQSHLRRSDTLARLGGDEFVVILEESSHSHFAA 627 Query: 333 MASR-ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 + +R +L L F + ++ + S+GI+ P D ++ AD AMY AK GR Sbjct: 628 VIARNLLNELSEAFDVESHRLFVTASIGISRYPYDAEDVVGLMSSADAAMYHAKSRGRNN 687 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPER 450 F + PEMN R ++L ++T LR AL +Q ++YQP+ R + + EAL+RW PER Sbjct: 688 FQFYAPEMNGRAQDFLEMETQLRDALALEQFEVYYQPQYDMRDQTLVGAEALLRWNHPER 747 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTI 509 G++PP DFI+ AEE+G IVP+G WV++ V RQ +W D+G+ +RVAVNIS Q + Sbjct: 748 GMVPPGDFIALAEETGAIVPIGEWVLMQVCRQNRQWMDEGLTPVRVAVNISIAQFRS-NL 806 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 L+QVL++ +++E+TES L+E++E ++++ + + G + +DDFGTGYSSL Sbjct: 807 SQTLEQVLEQSGMPAELLELEITESMLMEDEEETITLLNELKEKGLHISIDDFGTGYSSL 866 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L + P+D +K+D+ F+ + ++ +I+A+ Q ++L+++AEGVE ++ FL Sbjct: 867 SYLRKLPVDKLKIDRSFIAHVVHNQSDAAITGSIIALGQNMDLRILAEGVEHEEQRDFLL 926 Query: 630 KNGINERQGFLFAKPMPAVAFER 652 ++ QGFL+A+PM A F R Sbjct: 927 QHRCYIAQGFLYARPMTAEDFVR 949 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 328 bits (841), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 191/532 (35%), Positives = 303/532 (56%), Gaps = 33/532 (6%) Query: 142 DYTGLKEHDVIGQSVFKL------FMSRREAAASRRNNRVF-----FRSGNAYEVELWIP 190 +++G + +++G V +L M+R A+A N F +SG VE+ + Sbjct: 522 EFSGYRREELVGMHVTQLDASDASEMARHIASAVEDGNATFETRHRTKSGELKPVEVSV- 580 Query: 191 TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNA 250 T R F + FV S ++E AQE +R L++ D++TGLPN + Sbjct: 581 TFDAGRAACF-SLFVRDLSRRDE---------------AQEHIRRLSHFDTLTGLPNSSL 624 Query: 251 MQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQ 308 DL+ AI +A + + V+Y+D+D+F+ +ND GH GD+LL +++ + L + Sbjct: 625 FADLLRQAIGNAQRSGESLSVMYIDIDHFQHINDTLGHRIGDRLLVEIAGRFRNALCAEN 684 Query: 309 VLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGS 368 LAR GGDEFL+L + +A +++ P I E+ + S+GIA+ P G Sbjct: 685 TLARLGGDEFLILLPHAQVECAAHVAEKLIVAAADPMLIEDHEMLVTPSIGIAMYPADGE 744 Query: 369 DSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQP 428 D +++ ADTA AK GR + F PEM R L L+T LR+ALE ++LV+HYQP Sbjct: 745 DFETLLQRADTATNRAKSDGRNTYRFFAPEMQLRSAHTLRLETALRRALERNELVLHYQP 804 Query: 429 KITWR--GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW 486 +I G V +EAL+RWQ PE GL+ P +FI AE +GLI+P+G WV+ + Q+ W Sbjct: 805 QIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQTALLQLKAW 864 Query: 487 RDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALS 545 + G+ L +V VN+SA Q Q + + ++L E +++ELTES ++++ A++ Sbjct: 865 QLAGLQLGQVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELELTESAMMDDPVAAVA 924 Query: 546 VIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVA 605 ++ + G ++ +DDFGTGYSSL+ L RF ID +K+DQ FVRD+ + P +++V AIV+ Sbjct: 925 MMDALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGEAIVEAIVS 984 Query: 606 VAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 +A+ L + IAEGVE ++ AFL +G E QG+LF++P+P W + + Sbjct: 985 LARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDELAVWLRAW 1036 >UniRef50_Q2BL49 Sensory box/GGDEF domain/EAL domain protein n=2 Tax=cellular organisms RepID=Q2BL49_9GAMM Length = 1014 Score = 328 bits (841), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 189/560 (33%), Positives = 310/560 (55%), Gaps = 38/560 (6%) Query: 114 EQVVSEAHSAIVILDSRGNI---QRFNRLC--EDYTG-------LKEHDVIGQSVFKLFM 161 +QV A AI+I + G + FNR+ +D LK+H I ++ K Sbjct: 476 QQVFESAAEAILIYNPDGKVITNSSFNRITGYDDKKARLFALSILKDHPEIDATLSK--- 532 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 R R N + +W+ S + + + + Sbjct: 533 ------TGRWQGESIRRKANGEPLPIWLSIS------------ALSSTKTEQSSYVAVFS 574 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKK 279 DI+E + A+++L LA+ D++T LPNR D I+ ++ A N K ++++D+D FK+ Sbjct: 575 DISELKEAEQKLEKLAHYDNLTSLPNRTLFYDRIESSLARAARNGKKTALLFVDIDRFKQ 634 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRIL 338 VND +GH GDQLL + + I + + +AR GGDEF V+ S ++ +A RI Sbjct: 635 VNDNHGHHTGDQLLVEAARRISAHIRLGDTVARLGGDEFTVILSELDGLDPVQDIARRIQ 694 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 LR PFR+ E+++S S+GIA+ P+ G ++ ++++HAD AMY KE GR F Sbjct: 695 KSLRDPFRLDDKEIFSSASIGIAMYPDDGRNAESLLKHADVAMYHVKERGRNDILFFDKA 754 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLD 457 +N++ L+ NL+ A+ QL + YQP+ G E+ S EAL+RW+ PE+G I P D Sbjct: 755 INEQAEARAQLEDNLKTAINTQQLFMVYQPRFNISGTEILSAEALIRWKHPEQGFISPGD 814 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIFTALKQV 516 FI AE GLIV LGRWV++ + +W + G N V+VN+SARQL D ++ ++ Sbjct: 815 FIPLAESCGLIVELGRWVLMQACQAAQEWNENTGQNTPVSVNLSARQLHDSSLLIDIENA 874 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L + + +++E+TE+ +I++ E +S ++ +G ++ +DDFGTGYSSL L R P Sbjct: 875 LNQTGLDPSLLELEITETMVIQDMETVISRLEAIRTIGVRLSVDDFGTGYSSLIYLKRLP 934 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 + +K+D+ F+ D+ S++LV+A+++++ +L L V+AEGVE+ + +FLT+N +E Sbjct: 935 VSTVKIDKSFIDDVPGSSGSENLVKAVISMSHSLALNVVAEGVETEAQLSFLTENHCDEI 994 Query: 637 QGFLFAKPMPAVAFERWYKR 656 QG+L AKP A +R ++ Sbjct: 995 QGYLLAKPDSAETLQRLMRK 1014 >UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y83_COLP3 Length = 1071 Score = 328 bits (840), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 188/550 (34%), Positives = 308/550 (56%), Gaps = 23/550 (4%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 V A AI+I ++ I+ N +G +V+G+S L + + +N Sbjct: 515 VFKYASEAIMITNAENRIETVNPAFCHISGFSIEEVLGKSPNIL-------NSGKHDNHF 567 Query: 176 F------FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 + N+++ E+W G+ F V K + I +DIT+ ++ Sbjct: 568 YQKMWQSLEQDNSWQGEIWNKRKNGEIYPEFLAISVVRDQDKKPLQYISLFSDITKHKKY 627 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDLDNFKKVNDAYGHL 287 +E + + AN DS+TGLPNR + + + + + A++++V ++++DLD FK VND +GH Sbjct: 628 EEDIWLQANYDSLTGLPNRGLCVERLHNKLKGDKAEDSEVALLFIDLDRFKFVNDTWGHS 687 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFR 346 GD+LL+ ++ + +C+ +AR GGDEF+VL S A+E + ILT L +PF Sbjct: 688 SGDELLKLAAIRLRNCIREKDTVARFGGDEFVVLLVGLSNRFAIERVVKNILTSLSMPFH 747 Query: 347 I-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 + E S S+G+ + P G + ++++ADTAMY AK GR F FT MN+ V Sbjct: 748 LRNNNEAVVSASIGVTIGPVDGDNVELLLKNADTAMYQAKAAGRNTFQFFTKSMNETVSR 807 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 + ++ LR+A++ + V+HYQP ++ GE+ EAL+RWQ P++GLI P FI AEE Sbjct: 808 RMHIEQALRQAIKRQEFVLHYQPVVSLDTGEIIGAEALIRWQHPDKGLIYPDSFIEIAEE 867 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQEL---- 520 +GLI P+G+WVI + W D G+ ++VAVN+S+RQ QT T +K ++++ Sbjct: 868 AGLIEPIGQWVIEQACTDLRYWHDLGLKIQVAVNVSSRQ-CKQTSQTPIKDIIKKALKVN 926 Query: 521 NFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAI 580 N + VE+TES L++N E ++ +Q LG +++DDFGTGYSSLS L FPID + Sbjct: 927 NISPSSLKVEITESSLMDNSEEMMTTLQDIRSLGVAIYMDDFGTGYSSLSYLKHFPIDVM 986 Query: 581 KLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFL 640 K+D+ F+ SLV A+V + +L+L+++ EG+E+ + +L G + QG+ Sbjct: 987 KIDRSFIAGSIDDKTDASLVEAVVLIGHSLSLKLVGEGIETKQHYDYLRSLGCDYGQGYF 1046 Query: 641 FAKPMPAVAF 650 +KP+ + A Sbjct: 1047 ISKPIASKAL 1056 >UniRef50_Q39SC6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SC6_GEOMG Length = 821 Score = 327 bits (839), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 177/432 (40%), Positives = 271/432 (62%), Gaps = 12/432 (2%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 DIT+ +RA+E++R LA DS+TGLPNR M D + AI HA + V +++LDLD FK Sbjct: 371 DITDRKRAEEKIRRLAYYDSLTGLPNRPLMMDRLSQAIRHARRHGEVVALLFLDLDRFKD 430 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA--MASRI 337 VND+ GH GD+LL++V+ + C LAR GGDEF+++A ++A +A +A +I Sbjct: 431 VNDSQGHRVGDRLLQEVAARLSGCTRESDTLARLGGDEFVIIAPGV-RAATDASLLADKI 489 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L L PF + ++ + S+GI L P G + +++ AD AMY AK+ G + F+ Sbjct: 490 LAALAEPFTLDRQTLHIATSIGIVLFPSDGGNGEMLLQRADMAMYAAKDRGGNSYRFFSA 549 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI---TWRGEVRSLEALVRWQSPERGLIP 454 EMN R E L+ ++R+AL N + + YQP++ TW+ V +EALVRW P +G+I Sbjct: 550 EMNTRAVERHELEEDMRQALTNGEFFLMYQPQVNTGTWK--VVGVEALVRWNHPRKGVIL 607 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTAL 513 P FI AEE+G I LGRWV+ + RQ A+W+ G+ L++ VN+ ARQ + I + Sbjct: 608 PSRFIPVAEETGFISKLGRWVLEEACRQGAQWQHDGLPPLQMGVNLCARQFTHEEIVGTV 667 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 VLQ+ +++ELTE+ L+++ E A+S + Q LG ++ +DDFGTGYSS + L Sbjct: 668 SDVLQKTGLPSELLEIELTETMLMDS-ETAVSTLGQLKALGVRLAIDDFGTGYSSFNYLK 726 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 FP+D IK+DQ F+RDI + + +++ AIVAVA++L +V+AEGVE+ ++ +L Sbjct: 727 HFPLDRIKIDQSFIRDIGQSRGNGAIIEAIVAVARSLGPEVLAEGVETEEQLRYLMSITC 786 Query: 634 NERQGFLFAKPM 645 + QGF F++P+ Sbjct: 787 ADIQGFYFSRPL 798 >UniRef50_C6AVD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=45 Tax=Rhizobiales RepID=C6AVD3_RHILS Length = 717 Score = 327 bits (839), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 187/551 (33%), Positives = 292/551 (52%), Gaps = 9/551 (1%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVI--LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 A R +S S + +V + + +++ G FN C D G++ V+G++ Sbjct: 151 AARRQMSDTRSLLDSIVDNLPVGVFVKDMEADGLYVLFNEACGDIVGMRAEHVVGRTDRS 210 Query: 159 LFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG-QRLFLFRNKFVHSGSGKNEIFLI 217 LF + A R +R F + A E + G R+ + + + G +L+ Sbjct: 211 LFPPS-QTDAFREQDRRAFEANAAISFEETMQRADGVPRILRTVKRALPTPEGHAPRYLL 269 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDH-AINHADNNKVGVVYLDLDN 276 D+TEER + +L LA D +TGLPNR A + I+ A+ ++ + ++Y+D+D+ Sbjct: 270 GISQDVTEERAVEAKLAHLATRDPLTGLPNRAAFSEHINQRAVEATADSAIALLYIDVDH 329 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASR 336 FK +ND+ GH GD LL VS +L ++AR GGDEF V+ A R Sbjct: 330 FKHINDSKGHAAGDALLCQVSERLLQLAGEGDLVARLGGDEFAVVLELDEPERAGRFAQR 389 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 +L L F + + +CSVGIAL+P+H D+ ++RHAD A+Y AKE GR + + Sbjct: 390 LLQTLSHAFDLDGAREHVTCSVGIALAPDHAGDADVLMRHADLALYAAKESGRSIYRFYE 449 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPP 455 EM + L +ALE Q +HYQP + + + EAL+RW+ PERGL+ P Sbjct: 450 TEMRLAAQRRHVMTAELWEALEKRQFELHYQPIVQLDNDGIGGFEALIRWRHPERGLVAP 509 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQ 515 ++FI AEE+GLIVP+G WVI + R W ++LR+AVN+S Q ++ + + Sbjct: 510 MEFIPLAEETGLIVPIGDWVIREACRAAGGW---PVHLRIAVNLSVSQFRHASLLSTVVA 566 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 L E +++E+TES + + + +L ++ LG ++ +DDFGTGYSSLS L F Sbjct: 567 ALDETGLTADRLEIEITESVFLTDADQSLPRLRALKALGVRIAIDDFGTGYSSLSYLRSF 626 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P D IKLD+ FV I + ++VRA+V + N +AEG+E+ ++ L G +E Sbjct: 627 PFDKIKLDRSFVSGIETDAGNLAIVRAVVGIGSGFNATTLAEGIETEEQLQKLRAEGFSE 686 Query: 636 RQGFLFAKPMP 646 QG+L +PMP Sbjct: 687 VQGYLLGRPMP 697 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 327 bits (839), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 175/446 (39%), Positives = 272/446 (60%), Gaps = 7/446 (1%) Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN 265 H G + I+ IC DITE + A+E+L LA+ D++TGLPNR D + A A+ Sbjct: 278 HGGDESSVIWSICR--DITERKHAEEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRY 335 Query: 266 K--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 + V V++LDLD FK +ND GH GD LL+ V+ I C+ +AR GGDEF ++ Sbjct: 336 RYQVAVLFLDLDRFKIINDTLGHPVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTIILV 395 Query: 324 NT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 N + ++ M +IL L PF I E++ + S+GI+L P G + +++ AD AMY Sbjct: 396 NVDTVEDVKRMGQKILKTLAAPFNIDTHELFVTASIGISLFPSDGDNLDQLVKKADIAMY 455 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEA 441 K GR ++P+M+ + L L+T+LRKAL+N + ++YQPK+ + + ++EA Sbjct: 456 CVKGEGRNNVQFYSPQMDANADKRLLLETSLRKALDNREFRVYYQPKVDIVSKRITAMEA 515 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNIS 500 L+RW P GL+ P +FI AEE+GLI+P+G WV+ Q +W +GI +RVAVN+S Sbjct: 516 LIRWDHPILGLVSPGEFIPLAEETGLIIPIGEWVLRAACFQNCEWVRQGIPPMRVAVNLS 575 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 Q + + ++ +L E +++E+TES +++N + A+SV+ Q LG + +D Sbjct: 576 GYQFQQKNLLETIRGILDETGLTADLLELEITESVIMQNPDFAVSVLNQLRDLGVHISID 635 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFG GYSSL+ L RF ++ +K+D+ FVRD+ ++ AI+A+ +LNL+VIAEGVE Sbjct: 636 DFGIGYSSLAHLKRFSVNTLKIDKSFVRDVEINSADAAIATAIIAMGNSLNLKVIAEGVE 695 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMP 646 + + +FL+ N +E QG+LF+ PMP Sbjct: 696 TEGQLSFLSDNKCDEVQGYLFSTPMP 721 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 327 bits (838), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 191/559 (34%), Positives = 304/559 (54%), Gaps = 24/559 (4%) Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 ++ +++ D+ G I R NR + TG DV+G+ L R +AA R Sbjct: 360 DSQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVGRKRTMLTSGREDAALDDAMWETVQR 419 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 G A++ E+W G+ ++ G G + + DIT+ + +++L LA Sbjct: 420 CG-AWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVATHIDITQRKAVEDQLHKLAF 478 Query: 239 TDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDV 296 D +T LPNR + D + H + + N+ ++++DLDNFK +ND GH GD+LL +V Sbjct: 479 YDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGDRLLAEV 538 Query: 297 SLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL-----EAMASRILTRLRLPFRI---- 347 + + S + +AR GGDEF+V+ + + ++ EA+A +IL L P+R+ Sbjct: 539 AQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQVEAVAGKILAALDCPYRLVFDA 598 Query: 348 -----GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQR 402 + + + S+GI L H ++ +++ AD AMY AK+ GR F PEM Sbjct: 599 ELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFDPEMQAA 658 Query: 403 VFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSL---EALVRWQSPERGLIPPLDFI 459 + + L+ +LR+A+E Q ++YQP++ GE L EAL+RW RG++PP +FI Sbjct: 659 ITSRVALEADLREAVEAGQFQLYYQPQVV--GESHRLTGAEALLRWHHSRRGMVPPSEFI 716 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVL 517 AEE+GLI+PLG+WV+ Q+A W + + L VAVN+SA Q+ + VL Sbjct: 717 PLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVL 776 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 + + +ELTES L+ N E ++ + G LDDFGTGYSSLS L R P+ Sbjct: 777 ADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPL 836 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D +K+DQ FV ++ ++ + IVA+A++L L VIAEGVE+ ++ FL ++G + Q Sbjct: 837 DQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQ 896 Query: 638 GFLFAKPMPAVAFERWYKR 656 G+LF+KP+P FE+W + Sbjct: 897 GYLFSKPLPLAGFEQWIGK 915 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 327 bits (838), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 191/554 (34%), Positives = 304/554 (54%), Gaps = 9/554 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L+ A V + I D G I N TG +VIG++ ++ S + A Sbjct: 400 LNQAAAVFRSTGEGVAITDQNGTIVDVNEAFTKITGFDRDEVIGKNT-RILQSGKHDIAF 458 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLF--LFRNKFVHSGSGKNEIFLICSGTDITEER 227 N + + E+W K ++ + + G+ + DIT + Sbjct: 459 YENMWEQIQKHGHWRGEVW-NRAKSGTIYPEILTISAIDFKKGQQPSGYVGVFADITSLK 517 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDLDNFKKVNDAYG 285 + RL LA+ D++T LPNR ++ + H++ + KV V++LDLD FK +ND G Sbjct: 518 ETEARLDHLAHYDALTELPNRLLFRERLIHSLLMSERKKTKVAVLFLDLDRFKNINDTLG 577 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMASRILTRLRLP 344 H GD LL +++ + + + R GDEF L+L + + + +IL+ Sbjct: 578 HGVGDILLAEIASRLRHVVRMGDTVGRISGDEFCLILEDIQDVTDVVPIVEKILSVFSQT 637 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 +I + S S+G+A+SP++ +D+ A++ +D+AMY AKE GR + +T EM Q+ Sbjct: 638 IQINSHMLQISASIGVAISPDNSNDADALLSFSDSAMYEAKEAGRNTYKFYTAEMTQQAL 697 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAE 463 E+ ++ + LR ALE Q + YQP++ + + +EALVRWQ PERGLIPP FI AE Sbjct: 698 EHSFVQSALRDALEQSQFFVTYQPQLRIKDYSMVGVEALVRWQHPERGLIPPDSFIPIAE 757 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNF 522 SGLI LG W++ Q +W ++ +N R+ VN+SA QL D++ A+ L+E F Sbjct: 758 NSGLIRELGAWILRTACEQGVQWLNEQVNFGRIYVNVSATQLHDESFTEAVIMCLKETGF 817 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 + +E+TES ++++ + A++V+ F ++G ++ +DDFGTGYSSLS L + PID +K+ Sbjct: 818 PAEKLGLEVTESFIMKDPQHAINVLSSFKEIGIELAIDDFGTGYSSLSYLKQLPIDKLKI 877 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 DQ F+RDI P ++ A++A+ +ALNL+VIAEGVES + FL E QG+L+A Sbjct: 878 DQSFIRDIPDDPNDMAIAEAVIAMGKALNLEVIAEGVESQIQADFLLDKECTEVQGYLYA 937 Query: 643 KPMPAVAFERWYKR 656 P+ A AF W K+ Sbjct: 938 HPLTADAFSEWEKQ 951 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 327 bits (838), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 191/553 (34%), Positives = 315/553 (56%), Gaps = 18/553 (3%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 V E+ +V+ D + +I R N+ D TG + DV+G + K+ S R + + Sbjct: 360 TVFESAEGMVVTDEKKHILRVNQAFTDITGYQPKDVLGHHI-KVIRSGRHNQSFYDELEL 418 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF-LICSGTDITEERRAQERLR 234 ++ +++ E++ G+ + ++EI + + DIT+ + A+ +++ Sbjct: 419 QLKTQGSWQGEIFNKRKNGEEYLQWTMITAVISDHEDEIINYVITLIDITQRKAAESKIK 478 Query: 235 ILANTDSITGLPNRNAMQDLIDHA-INHADNNKVG-VVYLDLDNFKKVNDAYGHLFGDQL 292 LA D +TGLPNR + + ++ A +N N + G ++YLDLD+FK +ND GH GD+ Sbjct: 479 QLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAILYLDLDDFKTLNDTRGHDTGDKF 538 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLAS------NTSQSALEAMASRILTRLRLPFR 346 L VS +L C+ +AR GGDEF+++ + + + + +IL L P+ Sbjct: 539 LTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDLDIASKRADLLCRKILDTLSKPYY 598 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 I IE +++ S+G+ L +++HAD AMY AK GR F PEM +V E+ Sbjct: 599 IDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQAKGAGRNTHRFFNPEMQAKVLEH 658 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 + ++R AL ++ ++YQP++T G++ EAL+RWQ P++G I P++FI AEE+G Sbjct: 659 AAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALIRWQHPKQGTISPIEFIPIAEETG 718 Query: 467 LIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELN-FE 523 LI+PLG WV+ + +A W++ + +L +A+NISA+Q QT F ++QVL+ L + Sbjct: 719 LILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISAKQF-HQTGF--VQQVLEALQRYR 775 Query: 524 YCP--IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 P + +ELTES L E+ E ++ + Q + G LDDFGTGYSSL+ L R P+D +K Sbjct: 776 ANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDDFGTGYSSLNYLKRLPLDQLK 835 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ FVRD+ + R IV++A+++NL VIAEGVE+ ++ L G + QG+LF Sbjct: 836 IDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVETQEQRLALASYGCLDFQGYLF 895 Query: 642 AKPMPAVAFERWY 654 ++P+P AF Y Sbjct: 896 SRPVPLEAFPFNY 908 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 327 bits (838), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 197/562 (35%), Positives = 310/562 (55%), Gaps = 12/562 (2%) Query: 107 SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 + L + V + +VI D I NR TG E V+G++ K+ S Sbjct: 226 TEALRLSATVFASIREGVVITDLEPRIVAVNRAYMRITGYSEEQVLGKNP-KIIKSGLHD 284 Query: 167 AASRRNNRVFFRSGNAYEVELWIPTCKGQRL--FLFRNKFVHSGSG---KNEIFLICSGT 221 + ++ + E+W G+ +L N S N + T Sbjct: 285 KTFYQAMWATLKATGHWSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDESNSCNYVGVFT 344 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 DI++ ++++ +L LA+ D +TGLPNR Q + AI A + VGV+Y+DLD FK Sbjct: 345 DISQIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRFKN 404 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRIL 338 VND+ GH GD+LL ++ + + + LAR GGDEFL++ + A +A ++ Sbjct: 405 VNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQSLI 464 Query: 339 TRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L PF + E++ + S+GI+L PE S++T +I+H+D AMY AK+ GR + T Sbjct: 465 NLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYHTE 524 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPL 456 ++ E L ++ LR AL ++L++HYQP + R G V +EALVRWQ P + ++PP Sbjct: 525 ALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVPPG 584 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQ 515 FI AEE+GLIVPLG WV+ +Q W D G++ L +AVN+S RQ + + +++ Sbjct: 585 KFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMVQR 644 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 +L+E +++ELTES +E+ E ++ + + LG + +DDFGTGYSSL L RF Sbjct: 645 ILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLKRF 704 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 PID +K+DQ FVRD+ + + I+A+A+ L L V+AEG+ES ++ AFL + + Sbjct: 705 PIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDCDY 764 Query: 636 RQGFLFAKPMPAVAFERWYKRY 657 QG+LF +P+PA+ E W + + Sbjct: 765 YQGYLFHRPVPAIELEAWLREH 786 >UniRef50_B6R9S7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R9S7_9RHOB Length = 728 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 181/493 (36%), Positives = 289/493 (58%), Gaps = 12/493 (2%) Query: 169 SRRNNRVFFRSGNA---YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 +RR +R F +G A YE+E G K + N ++ + T+I++ Sbjct: 214 NRRLDRKVFITGRALPPYEIEQR--NHAGDIFHFIVTKSPLLDAEGNTTHVVTTATNISD 271 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDA 283 +RA+ L +A+ D++TGLPNR + + ID I N+ + ++DLD FK +NDA Sbjct: 272 RKRAEAHLLHIAHHDALTGLPNRTMLGERIDEEIFQCRNSGRSFALHFIDLDRFKSINDA 331 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM--ASRILTRL 341 GH GD+LL ++ +L C++ ++AR GGDEF +L ++ +S+ EAM A +++ + Sbjct: 332 LGHRTGDRLLEVLAERLLRCVDGSDLVARLGGDEFAILQTDL-KSSEEAMRFAQHLVSVV 390 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 PF I E+ TS SVGI PE G +S ++R AD AMY +K G F +F+ +M+ Sbjct: 391 EEPFHISGKELQTSASVGITKYPEDGLNSEELLRCADMAMYQSKADGGNTFHLFSTKMDH 450 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFIS 460 V E + L+ LR A+E+DQL + YQP+I R E+ EAL+RW P+ G++ P F+ Sbjct: 451 HVKETVALEAELRNAIEHDQLELFYQPQIDLRTNEIVGAEALLRWNRPDYGVVAPNVFLG 510 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQE 519 AEE GLI+P+G WVI +Q KW D G+ R+AVNIS Q Q + LK L Sbjct: 511 TAEEVGLILPIGEWVIFAACQQAKKWMDMGLETPRIAVNISPTQFRKQNVPQLLKDALVS 570 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 + +++E+TE+ ++ + + +++ ++G + +DDFGTGYSSL+ L+R+ +D Sbjct: 571 CSLPADKLEIEITENIVLHGSDATVRDLREIREMGIAISIDDFGTGYSSLAYLSRYSVDC 630 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ F RD+ P + +++AIV + ++L+L +IAEGVE+ ++ +L G QG+ Sbjct: 631 LKIDRCFTRDMMTDPNNTVIIKAIVGLGKSLDLSIIAEGVETREQAEYLKDAGCEMAQGY 690 Query: 640 LFAKPMPAVAFER 652 LF KP+PA F R Sbjct: 691 LFGKPVPAEDFAR 703 >UniRef50_A1ALB3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=2 Tax=Desulfuromonadales RepID=A1ALB3_PELPD Length = 705 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 182/441 (41%), Positives = 267/441 (60%), Gaps = 7/441 (1%) Query: 217 ICSGT--DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYL 272 + SGT DIT +A+ + L N D++TGLPNR+ + D + AI A D + V V+ L Sbjct: 255 LISGTVLDITARIKAESEIHHLINYDTLTGLPNRSLLHDRLRQAIAQAAQDRHMVWVLCL 314 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV-LASNTSQSALE 331 DLD FK VND GH GD+LL++V+ + +C+ LAR GGDEF+V L S+ Sbjct: 315 DLDRFKGVNDTLGHRSGDKLLQEVARRLAACVRESDTLARLGGDEFVVVLDGVVSEKGAS 374 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A +ILT + P I E+YT+ S+GIA P G D +++HAD AMY AKE R Sbjct: 375 IVAKKILTLIAEPIPIDDHELYTTASIGIAAYPMDGEDGHTLLKHADLAMYKAKELDRNN 434 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPER 450 F F+ +MN +V E + L+ ++RKALE D+ + YQP++ R G + +EAL+RW P+ Sbjct: 435 FHFFSHDMNIKVMERMMLENSMRKALERDEFFLVYQPQVDARSGRITGVEALLRWNHPDM 494 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTI 509 GL+ P FI AEE+G IVPLG WV++ RQ W+ G LRVAVN+S +Q + Sbjct: 495 GLLTPDRFIYLAEETGFIVPLGEWVLMTACRQNRAWQKLGFPPLRVAVNLSGKQFGQHRL 554 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 + +L E E +++E+TES ++ N + +++++ + G + +DDFGTGYSSL Sbjct: 555 DEMISAILLETGLEPEWLELEITESAIMRNADQNIAILRSLKEKGISLAIDDFGTGYSSL 614 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L FPI +K+D+ FV+DI P ++ I+A+AQ L L VIAEGVE+ + FL+ Sbjct: 615 SYLKHFPITRLKIDKTFVQDITTNPDDAAIAEIIIAMAQTLKLNVIAEGVETRAQMEFLS 674 Query: 630 KNGINERQGFLFAKPMPAVAF 650 + E QG+LF++P+ F Sbjct: 675 THTCFEMQGYLFSRPLTTDKF 695 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 201/574 (35%), Positives = 306/574 (53%), Gaps = 49/574 (8%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L Q ++ ++VI D+ G I+ N E TG + +VIGQ Sbjct: 779 LKILYQATEQSPVSVVITDAEGTIEYVNPKFEKITGYQRAEVIGQ--------------- 823 Query: 170 RRNNRVFFRSGNAYEVE---LWIPTCKGQRLFLFRNKFVHSGSGKNEIF----------- 215 N R+ +SG E +W GQ + +F H+ E+F Sbjct: 824 --NPRI-LKSGETTTEEYKQIWKTITSGQE---WHGEF-HNKKKNGELFWEAASISPIKN 876 Query: 216 -------LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK-- 266 + DITE + Q L AN D++TGLPNR D + AI AD K Sbjct: 877 AEGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLPNRFLAIDRLKQAILQADRQKKR 936 Query: 267 VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS 326 V V+++DLD+FK VND GH +GD LL+ VS + CL +AR GGDEFL++ N Sbjct: 937 VAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVARLGGDEFLIILPNLR 996 Query: 327 QS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAK 385 ++ + +AS+IL+ L PF + E + S S+GI L P+ G+D + ++R+AD AMY K Sbjct: 997 ETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDVSVLMRNADAAMYLGK 1056 Query: 386 EGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVR 444 GGR F +T MN+ L ++ LR AL+ ++ + YQP I R + V EAL+R Sbjct: 1057 RGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPIIDLRFQTVIGAEALLR 1116 Query: 445 WQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQL 504 W +PE G + P FIS AEE+GLI LG WVI ++V W+ +G + VAVN+S RQ Sbjct: 1117 WNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQGSPIWVAVNLSPRQF 1176 Query: 505 ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGT 564 + + + + +++E+TE L+E+ + +I+Q ++ ++ +DDFGT Sbjct: 1177 RESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQLHEMDFRLSIDDFGT 1236 Query: 565 GYSSLSQLARFPIDAIKLDQVFVRDI-HKQPVSQSLVRAIVAVAQALNLQVIAEGVESAK 623 GYS+LS L +FP + +K+D+ F+ DI H Q V +LV+ I+A+ L LQVIAEGVE+ + Sbjct: 1237 GYSALSYLIKFPFNRLKIDRSFIADIPHNQEVL-ALVKTIIAMGHGLKLQVIAEGVETTE 1295 Query: 624 EDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 + L G + QG+ F++P+ + F R+ + + Sbjct: 1296 QANILEAEGCDYAQGYFFSRPLLSEEFRRYLQSH 1329 >UniRef50_A4BQ25 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ25_9GAMM Length = 818 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 171/453 (37%), Positives = 272/453 (60%), Gaps = 5/453 (1%) Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD 263 H G F +I+E +R +E L A+ D++T LPNR+ + D + A+ +A Sbjct: 352 IAHRGPDGEVQFFSAIARNISERKRLEEELAYRASHDALTCLPNRSLLLDRMQQALAYAR 411 Query: 264 --NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL 321 N++VGV+++DLD FK++ND GH GD +LR V+ I + ++R GGDEF+V+ Sbjct: 412 RYNHRVGVLFVDLDRFKRINDTLGHHAGDTILRTVAERICQGVRRSDTVSRHGGDEFVVI 471 Query: 322 ASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 A+ S L ++ S+I + P ++ +V +CS+GIAL P G D+ ++++ADTA Sbjct: 472 AAQVFDSNDLASIVSKIRKTVSEPIKVKNRQVVLTCSIGIALYPFDGEDTDTLLKNADTA 531 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSL 439 MY AKE GR F +T EMN + E L L+ LR+A++ + V+HYQP++ + G + L Sbjct: 532 MYQAKENGRNDFQYYTKEMNAQSHEMLNLEEELRRAVKAGEFVLHYQPQVDLQTGALSRL 591 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVN 498 EAL+RWQ PERG++ P FI EE+GLI P+G WV+ + VRQ A W++ + + VAVN Sbjct: 592 EALIRWQHPERGMLAPGTFIPVLEETGLIEPVGEWVVREAVRQCAVWKEMELPPVTVAVN 651 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 +S RQ A+ I A+++++ E +++E+TES L+ + ++ SQ G +V Sbjct: 652 LSVRQFANLNIAEAIERIVTEAGIPPACLELEITESVLMADAFDGAEALRALSQRGLRVA 711 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 +DDFGTGY +L L R P++ +K+D FV D+ P + ++V AI+ + L +V+AEG Sbjct: 712 VDDFGTGYCALHYLRRLPVNTLKVDHSFVSDLEGDPTTAAIVSAIITLGHDLGCKVVAEG 771 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 VE+ + L + G + QG+L+ +P P E Sbjct: 772 VETLAQCNHLHRLGCDLAQGYLYYRPCPPEEIE 804 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 174/434 (40%), Positives = 272/434 (62%), Gaps = 9/434 (2%) Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH--ADNNKVGVVYLDLDNFK 278 DIT ++A+ERL+ LAN D +T LPNR+ + ++ I + +V V++LDLD FK Sbjct: 631 ADITVRKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIASSGQQVAVMFLDLDRFK 690 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRI 337 +ND++GH GD+LLR+ + + + +AR GGDEF +L S+ SQ+ L +A I Sbjct: 691 LINDSFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLVSHFASQATLSTLAEDI 750 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L L P + E+ + S+GI++ P GSD+ ++++AD AMY AKE G+ + F Sbjct: 751 LAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAMYRAKEAGKNTYQFFAA 810 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI---TWRGEVRSLEALVRWQSPERGLIP 454 EMN + E L L+ LR+ALE + +H+QP + T+R E +LE L+RW+ PE GL+ Sbjct: 811 EMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLE--ALEVLLRWRHPELGLVS 868 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTAL 513 P+ FI AEE+GLI P+G WVI RQ+A+W G+++ R+A+N+SARQ Q + + Sbjct: 869 PVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINLSARQFEQQGLIMQV 928 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 L E +++E+TES +++N A+S++ + LG ++ +DDFGTGYSSLS L Sbjct: 929 AGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSIDDFGTGYSSLSYLK 988 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RFP+D +K+D+ F+ + + ++ AI+A+A+ L+ V+AEGVE+ + AFL G Sbjct: 989 RFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGVETEAQAAFLCAKGC 1048 Query: 634 NERQGFLFAKPMPA 647 QG+LF++P+PA Sbjct: 1049 QLLQGYLFSRPLPA 1062 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 195/548 (35%), Positives = 293/548 (53%), Gaps = 10/548 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 + A V + +AI+I D+ G I++ NR TG + +G + +L S + Sbjct: 343 MRLAASVFDNSLNAILIADANGRIRKVNRAFTAITGYTAEEAVGDTP-RLMKSGLHSPGF 401 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF--VHSGSGKNEIFLICSGTDITEER 227 ++ ++ EL + CK R+ R VH +G + I DITE++ Sbjct: 402 YGEMWAELQACGKWDGEL-MNQCKDGRIISVRESIAAVHDPAGAV-AYYIGIFHDITEQK 459 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYG 285 + +R+ LA D +TGLPNR + D H + A D ++ V++LDLD FK +ND+ G Sbjct: 460 ASAQRIHQLAYYDVLTGLPNRALLMDRCQHELARAMRDGKRLAVLFLDLDRFKHINDSLG 519 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLP 344 H GD LLR V+ + L +AR GGDEF+VL + SA +E A RIL R P Sbjct: 520 HPVGDGLLRAVAQRLQGTLRDSDTIARLGGDEFIVLLEHVETSAGVELAARRILDAFRDP 579 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 F++ + SVGI+L P+H SD T++ ++AD A+Y AK GRG F F P N Sbjct: 580 FQLEEHRLSVGASVGISLFPDHASDITSLFKYADLALYQAKAAGRGDFRFFEPRFNDAAK 639 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAE 463 + + L+ LR+ALE +QL + YQP G + EAL+RW P G + P FI AE Sbjct: 640 DRMRLERELRQALERNQLSLQYQPVFALPDGRLAGAEALLRWTHPALGSVSPATFIPIAE 699 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGINLRV-AVNISARQLADQTIFTALKQVLQELNF 522 +SGLIVP+G WV+ RQ +W D G++ V AVN+S Q+ + + VL Sbjct: 700 DSGLIVPIGAWVLEQACRQARQWLDAGLDPGVIAVNLSGMQIQRNDLVDTVSSVLARTGL 759 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 C +++E++ES + + E L + Q LG + +DDFGTG +SL L R P+ +K+ Sbjct: 760 PACHLELEISESYITRHAESDLQRLGQLRALGVSMAIDDFGTGQTSLGHLRRLPVSKLKI 819 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 D+ F+ DI + ++ RAI+ + L L V+AEGVESA +++ L + QGF +A Sbjct: 820 DRSFMADIEHDAAAAAVTRAIIGLGHGLGLTVVAEGVESAAQESALVAQHCDLVQGFRYA 879 Query: 643 KPMPAVAF 650 +P+ A F Sbjct: 880 RPLDAPVF 887 >UniRef50_D2LZH2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LZH2_BACS4 Length = 1071 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 161/443 (36%), Positives = 275/443 (62%), Gaps = 6/443 (1%) Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLD 273 +I + DITE + +E + L D++TGLPN+ + ++ I A + ++ ++ +D Sbjct: 130 IIVNYRDITERKLYEEEIHQLVYHDNLTGLPNQYMLDSFLESEIYKAKYECTRLALLIID 189 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM 333 LD FK +ND+ GH GDQLL++V ++S + +L R GGDEF+++ + + + + Sbjct: 190 LDRFKVINDSIGHTIGDQLLKEVGKRLVSIVSKSDLLVRKGGDEFVIVLPSIKKDQVLKV 249 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 I+ L PF+I +++TS S+G+++ PE G + +HA+ AMY AK+ G GQ+ Sbjct: 250 VDNIINLLTSPFKIKSYDIFTSPSIGVSIFPEDGKTKDLLYKHAEFAMYQAKKSGNGQYH 309 Query: 394 VFTP-EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERG 451 F+ E N + Y ++ LRKA+E Q +HYQP+I GE+ +EAL+RW+ P+ G Sbjct: 310 FFSSAEFNGDMNPYT-IEVELRKAIEQKQFTLHYQPRINLSTGELIGVEALIRWEHPKWG 368 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFT 511 LI P FI AE+SGLIVP+G WV+ + +Q W+ G++ V+VN+S +Q A + + Sbjct: 369 LISPASFIPIAEDSGLIVPIGNWVLEEACKQNKIWQVSGMSCVVSVNLSPKQFAHTNLAS 428 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 +K L + +++E+TES + + ++ +++ +LG QV +DDFGTG+SSL Sbjct: 429 VIKNTLFNTGLDPHLLEIEITES-MTADITRTVATLEEIKKLGIQVSIDDFGTGFSSLYY 487 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L +FP++ +K+D+ FV ++H P +++V+ I+++A+ LNL V+AEG+E+ ++ AFL ++ Sbjct: 488 LKKFPVNTLKIDRSFVSELHNNPDEETIVKTIISMARNLNLNVVAEGIETKEQLAFLQQH 547 Query: 632 GINERQGFLFAKPMPAVAFERWY 654 +E QGFLF+KP+P E + Sbjct: 548 LCHEGQGFLFSKPLPPSVLEEKF 570 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 193/557 (34%), Positives = 318/557 (57%), Gaps = 14/557 (2%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 AR+ L A+QVV A AIVI + + I N E TG H+V+G++ K+ S Sbjct: 376 ARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNP-KITQS 434 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT- 221 R A+ + E+W G+ K++ + +N +I Sbjct: 435 GRHDASFYATMWKHLVGEGHWSGEIWDRRRNGEIF----PKWLAISAIRNRQGVISHFVG 490 Query: 222 ---DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDN 276 DI+ ++ +++L L D +T LPNR +D + H + A+ N + ++ +DLD Sbjct: 491 VFNDISRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLLLVDLDR 550 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MAS 335 FK +ND GH GD+LL VS +++ + +AR GGDEF ++ ++ A +A Sbjct: 551 FKIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERAEDAAHVAE 610 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 I+ +L++PF I E++ S+GIA+ + G D ++ +AD AM+ AKE G+G + F Sbjct: 611 TIINQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKESGKGTYKFF 670 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIP 454 TP+MN + + L ++ LR+A++N +L++HYQPK+ ++ +EALVRW P RG+IP Sbjct: 671 TPDMNIQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWVHPTRGVIP 730 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTAL 513 P +FI AEE+GLIVPLG V+ QV +W D G+ ++VAVN+S RQ + + + Sbjct: 731 PGEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQEPNLIEKV 790 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 ++L++ F +++E+TES + + + + +++ LG ++ +DDFGTGYSSLS L Sbjct: 791 SEILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTGYSSLSYLK 850 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 +FP+ A+K+DQ FVRD+ S++ +I+++A+A+ L V+AEGVE+A++ FL Sbjct: 851 KFPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQMEFLRGQEC 910 Query: 634 NERQGFLFAKPMPAVAF 650 + QGF +KP+P F Sbjct: 911 QQVQGFFLSKPLPPSDF 927 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 190/556 (34%), Positives = 314/556 (56%), Gaps = 24/556 (4%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 +V + I I D+ NI N+ TG E +V+G++ L AS R+++ Sbjct: 854 KVFEQGGEGIAITDAACNIVMINQAFTRITGYSEVEVLGRNPSLL--------ASGRHDQ 905 Query: 175 VFFRSG-------NAYEVELWIPTCKGQRL--FLFRNKFVHSGSGKNEIFLICSGTDITE 225 F++S ++ E+W G +L ++ G+ + I + DIT+ Sbjct: 906 AFYQSMWESIESLGHWQGEIWNRRKDGSVYPEWLLISRVDGDGAPTH---YIGTFIDITQ 962 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDH--AINHADNNKVGVVYLDLDNFKKVNDA 283 + A+ ++ LA+ D++TGLPNR+ +++ + H A H + ++++DLD FK VND+ Sbjct: 963 HKEAEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDS 1022 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRL 343 GH GD LL V+ + + + ++R GGDEF+V+ +T +A+++L + Sbjct: 1023 LGHRVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVAAKLLEVMAP 1082 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 +RI E+ S S GIA+ P G A+ ADTAMY AK+ GR +C FT EM +R Sbjct: 1083 AYRIEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFTAEMQERS 1142 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYA 462 L ++ +LR+ALEN +L +HYQP+ T + EAL+RWQ P+ G++ P++FI A Sbjct: 1143 ARNLQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIA 1202 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELN 521 EE GLI+P+G WV+ V Q+ W+ +G+ + VAVN+SA Q ++ + ++L Sbjct: 1203 EECGLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEG 1262 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 +++ELTES ++N A++ + + LG ++ +DDFGTGYSS+S L RF + +K Sbjct: 1263 LAAQFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLK 1322 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ FV D+ P +++V A +++A+ L LQ IAEGVES + AFL G +E QG+LF Sbjct: 1323 IDRSFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLF 1382 Query: 642 AKPMPAVAFERWYKRY 657 ++P+ F + + + Sbjct: 1383 SRPLAPAQFAAFVRAH 1398 >UniRef50_A1AUR6 Diguanylate cyclase/phosphodiesterase n=2 Tax=Pelobacter propionicus DSM 2379 RepID=A1AUR6_PELPD Length = 729 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 173/439 (39%), Positives = 265/439 (60%), Gaps = 5/439 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKK 279 DITE R+++++++ +A DS+T LPNR D + AI HA D N + V++LDLD FK Sbjct: 287 DITERRKSEQQIQHMAYFDSLTDLPNRVLFLDRLRQAIAHALRDENSLAVLFLDLDRFKD 346 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRIL 338 +ND GH GDQLL V+ + + LAR GGDEF+V+ ++ + +A ++ Sbjct: 347 INDTLGHSAGDQLLIQVTRRLGRQIRSCDTLARLGGDEFVVIVTDLGKKMNATRVAQDLI 406 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 ++ PF I E++ + S+GIAL P+ G+++ +++HAD AMY++KE GR ++ ++ Sbjct: 407 NAIQPPFLIAGRELHVTTSIGIALFPDDGNNAETLVKHADLAMYSSKESGRNRYNFYSAS 466 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 MNQ+ + + LR ALE + + +QP + V + EALVRW P RG IPP Sbjct: 467 MNQKALMRMETEAGLRNALERREFYVEFQPIMNAADSTVVAAEALVRWNHPTRGRIPPDQ 526 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQV 516 FI AEE+GL+VPLG WV+ V ++ W D G+ L R +VN+S+RQ+ Q ++ Sbjct: 527 FIDLAEETGLVVPLGEWVLRTVCSRIKTWSDAGLPLIRFSVNVSSRQIERQDFAEIVRNA 586 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L+E +++ELTESCLI + + +S + + G +DDFGTGYSSL + P Sbjct: 587 LRESGANSAQLEIELTESCLIRHSDTNISDLFGLKEWGVSFAIDDFGTGYSSLGYIKTLP 646 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 ID IK+D+ FVRDI Q++V AI+A++Q L ++ IAEGVE+ ++ FL + G E Sbjct: 647 IDHIKIDRSFVRDISTDFHDQAIVEAIIAMSQRLGIRNIAEGVETIEQVRFLQERGCEEI 706 Query: 637 QGFLFAKPMPAVAFERWYK 655 QG+ F +P+ A A E + Sbjct: 707 QGYYFHRPLSAEALEELLR 725 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 199/555 (35%), Positives = 301/555 (54%), Gaps = 11/555 (1%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 V ++ +++ D+ G I R N TG DVIG++ L R +AA R Sbjct: 355 VAFDSLEGMMVTDADGTILRVNSAFTKCTGYTADDVIGRNPRLLSSGRHDAAFFRDMWET 414 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 R G ++ E+W G+ + N + + DITE + A+E+++ Sbjct: 415 IHRVGG-WQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHYVGTHYDITERKLAEEQIKE 473 Query: 236 LANTDSITGLPNRNAMQDLIDHAINHADNNKV--GVVYLDLDNFKKVNDAYGHLFGDQLL 293 LA D++T LPNR ++D + I + N ++++DLDNFK +ND GH GD LL Sbjct: 474 LAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVDLDNFKTLNDTLGHDKGDLLL 533 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ------SALEAMASRILTRLRLPFRI 347 V++ +L + +AR GGDEF+++ S+ S+ S E A ++LT L P+ + Sbjct: 534 GQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAASETEGAAEKVLTALSRPYYL 593 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 E T+ S+G L H + +++ +D AMY +KE GR C F P M V E Sbjct: 594 AGTEFRTTASIGATLFTGHETSIDELLKQSDLAMYKSKESGRNAICFFDPAMQTVVMERA 653 Query: 408 WLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGL 467 L+ LR+A++ DQL++HYQ ++ V EALVRWQ P+ GL+PP +FI AEE+GL Sbjct: 654 ALEAALRRAIDEDQLLVHYQAQVLNGNRVTGAEALVRWQHPQHGLVPPAEFIPLAEETGL 713 Query: 468 IVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 I+ LG V+ RQ+A+W R +L +AVN+SA+QL + + T++ + L + Sbjct: 714 ILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSAQQLRENSFVTSVLEALARTGADPS 773 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 + +ELTES L++N E + + G LDDFG GYSSLS L R P+ +K+D+ Sbjct: 774 RLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDDFGVGYSSLSYLKRLPLGQLKIDRS 833 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 FVRD+ P + RAIVA+AQ+L L VIAEGVE+ + FL G + QG+LF +P+ Sbjct: 834 FVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVETQAQRQFLADAGCHAYQGYLFCRPL 893 Query: 646 PAVAFERWYKRYLKR 660 P FE + + R Sbjct: 894 PIEDFEAFADTFDSR 908 >UniRef50_B9M1S6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=B9M1S6_GEOSF Length = 749 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 170/435 (39%), Positives = 261/435 (60%), Gaps = 5/435 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKK 279 D+T+ + +E++R LA D++TGLPNR + D ++ + A D +V +++LDLD FK Sbjct: 286 DVTQRKVNEEQIRRLAYYDNLTGLPNRALLMDRLEQMLTKARRDKTRVVLLFLDLDRFKV 345 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS-NTSQSALEAMASRIL 338 +ND GH GDQLL V+ + L LAR GGDEF+VL + Q + +A ++ Sbjct: 346 INDTMGHAHGDQLLVQVANRLRQALRSSDTLARIGGDEFVVLFTLEGPQLNVSPLAQHLI 405 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 + + I +VY S S+GIA P+ G D +++R AD AMY AKEGG + ++PE Sbjct: 406 DSITSVYPISGRDVYASTSIGIATFPDDGGDCNSLLRCADMAMYAAKEGGGKGYHFYSPE 465 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 MN + + ++TNLR ALE ++ + +QP + R G + EAL+RW PE+GLI P Sbjct: 466 MNLKAHARMEMETNLRHALEREEFFLEFQPIVNARDGRLVGAEALLRWSDPEKGLIMPDM 525 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQV 516 FI AEESG IVPLG WV+ R++ WR+ G+ R++VN+S RQ + + Sbjct: 526 FIQVAEESGFIVPLGEWVLRTACRKMKDWREAGLPPFRISVNVSGRQFCQANFTDTVCSI 585 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 ++E + + +E+TE+ L+ + E + Q +L + +DDFG GYSSL L +FP Sbjct: 586 IRETGMDPSFLALEMTETSLMVDVEATAKALMQLKELDISIVIDDFGAGYSSLGYLQKFP 645 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 ID IK+D+ F+RD+ +++V AI+A+A L LQV+AEGVE++++ FL + G +E Sbjct: 646 IDRIKIDRSFIRDLSSHANDKAIVEAIIAMAARLKLQVVAEGVETSEQLDFLKEQGCHEI 705 Query: 637 QGFLFAKPMPAVAFE 651 QGF F +P+ F+ Sbjct: 706 QGFYFHRPLSEELFK 720 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 182/455 (40%), Positives = 260/455 (57%), Gaps = 14/455 (3%) Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVG----VVYLDL 274 +G +IT+ +RA+E ++ LA D +T LPNR + D + HA+ A + + G ++++DL Sbjct: 694 TGMNITDRKRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHAL--ASSTRSGREGALLFIDL 751 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA 334 DNFK +ND GH GD LL+ V+L + SC+ +AR GGDEF+V+ S+ LEA A Sbjct: 752 DNFKTLNDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGDEFVVMLEELSEQTLEAAA 811 Query: 335 S------RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 +IL L P+ + E S S+G L +++ AD AMY AK+ G Sbjct: 812 QTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLFGNKPQSIEELLKQADIAMYQAKKAG 871 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSP 448 R F P+M + V L+ L KALENDQ ++YQ ++T E EAL+RW P Sbjct: 872 RNTLRFFDPQMQETVIARALLERELSKALENDQFQLYYQIQMTDLNEPFGAEALIRWIHP 931 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN--LRVAVNISARQLAD 506 ERGLIPP FI AEE GLI+P+G WV+ Q+ W L +AVN+SAR Sbjct: 932 ERGLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNASTRELVLAVNVSARSFFQ 991 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 T ++ VLQ + +E+TES ++ + E + + +LG Q +DDFGTGY Sbjct: 992 DDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMNALKKLGVQFAMDDFGTGY 1051 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSL L R P+D +K+DQ FVRDI +++V IVA+A +LNL VIAEGVE+ ++ Sbjct: 1052 SSLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAHSLNLDVIAEGVETEQQRQ 1111 Query: 627 FLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 L ++G ++ QG+LF KP P FE K L++A Sbjct: 1112 LLIESGCSQYQGYLFGKPAPIRQFEESLKPGLRQA 1146 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 325 bits (834), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 192/548 (35%), Positives = 313/548 (57%), Gaps = 8/548 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV-FKLFMSRREAAA 168 L + QV A+ I D+ I R N E TG +V+G + F+ S + Sbjct: 536 LMLSAQVFEHGSEAVFITDASHRILRVNPAFEAITGYAAGEVLGLTPDFRCVSSPGGTSI 595 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 S+R ++ E+ G+ + + V + + ++ I +DI+ + Sbjct: 596 SQRWE--LAEQTGRWQGEIVCRRRSGEHYYEWSALSVVRHANGSVLYFIGQFSDISAVKA 653 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLF 288 A+ R LA D +TGLPNR+ + D + +N +N V++ DLD FK +ND+ GH Sbjct: 654 AEARALRLACFDPLTGLPNRSLLFDRLQEVLNREPHNGA-VLFCDLDRFKNINDSLGHTL 712 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMASRILTRLRLPFRI 347 GD +L++V+ +++ + + R GGDEF LVL + LE +A ++L + P + Sbjct: 713 GDAVLKEVARRLVARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILL 772 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 +++ + S+G+A+ P G+D A++RHAD A+Y AK GR + FT E++ RV EYL Sbjct: 773 DGLDLRVTPSLGVAVFPRDGNDCDALLRHADAALYHAKSRGRNTYRFFTREIDDRVSEYL 832 Query: 408 WLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 ++ LR ALE + +HYQP++ G V +EAL+RW+ PE+G+I P+ F+ AEE+G Sbjct: 833 HIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETG 892 Query: 467 LIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 LIVP+G WVI + RQ WR G+ + +AVN+S RQ + +++ A+ + L + + Sbjct: 893 LIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFS-RSVIEAIDEALADSGLDPR 951 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 + VE+TES ++E+ + A +V++ G V +DDFGTGYSSL+ L RFPID +K+D+ Sbjct: 952 WLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRS 1011 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 F+RDI + +V AI+ +A L ++V+AEGVE+ + +L + G +E QG+L ++P Sbjct: 1012 FIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQ 1071 Query: 646 PAVAFERW 653 PA A +W Sbjct: 1072 PAAALGQW 1079 >UniRef50_B7KEN2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B7KEN2_CYAP7 Length = 1471 Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 193/551 (35%), Positives = 312/551 (56%), Gaps = 13/551 (2%) Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV--IGQSVFKLFMSRREAAASRRNNR 174 V +A I+I G I + N + TG D+ I K + R+E S + Sbjct: 922 VIDAPLPILIHAEDGEIIQVNHAWTELTGYTHEDIPTIADWTEKAYGERKEIVRSVIDE- 980 Query: 175 VFFRSGNAYEVELWIPTCKGQ-RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 ++ G E E I G+ R++ F + + N ++ DITE ++A+E+L Sbjct: 981 LYKIDGKVEEGEFTITIKTGETRIWNFSSAPL-GRLADNRRLIMSMALDITERKQAEEQL 1039 Query: 234 RILANTDSITGLPNRNAMQDLIDHAINHADNNK---VGVVYLDLDNFKKVNDAYGHLFGD 290 R A D +TGLPNR + D I+ AI + ++++DLD FK VND+ GH GD Sbjct: 1040 RHAAVHDQLTGLPNRILLLDRIEQAIKRTQQEEKYLFALLFIDLDRFKVVNDSLGHWVGD 1099 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGL 349 QLL ++ + +C+ +AR GGDEF++L N TS++ MA +I LR F + Sbjct: 1100 QLLGAIADKLKACVRPMDTVARFGGDEFVILLENLTSRTEATKMAQQITDELRSSFCLQG 1159 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWL 409 + + S S+GI + ++ ++R+AD AMY AKE GR ++ +F +M+ + L L Sbjct: 1160 QDFFISVSIGITFPSSYEESASELLRNADIAMYRAKEKGRARYTIFDSKMHIQATRLLEL 1219 Query: 410 DTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 +TNLR ALE ++L++HYQP ++ G++ EALVRW+ P++GLI P +FI AEE+GLI Sbjct: 1220 ETNLRLALEREELIVHYQPIVSLTTGKLLGFEALVRWEHPKKGLISPGEFIPIAEETGLI 1279 Query: 469 VPLGRWVILDVVRQVAKWRDK--GIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 +PLG WV+L+ RQ+ W+ + G++ +RV+VN+S +QL + L+ +L++ E Sbjct: 1280 IPLGEWVLLESCRQMKAWQKEFSGLDKIRVSVNLSGKQLEYPHLINCLESILKQTGLEGK 1339 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 + +E+TES L+ N E+ ++ Q Q+ +DDFGTGYSSLS L P+D +K+D+ Sbjct: 1340 NLKLEITESMLMNNKEVVSDLLLQIKGKNIQISIDDFGTGYSSLSYLHYLPVDTLKIDRS 1399 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 FV + + + +V AI+ +A L + V+AEGVE+ + L + G QG+ F+KP+ Sbjct: 1400 FVNRMTQLGENFEIVEAIINLAHHLQMDVVAEGVETEQHIKQLKQLGCESGQGYFFSKPL 1459 Query: 646 PAVAFERWYKR 656 + W+++ Sbjct: 1460 DSQKVTSWFEK 1470 >UniRef50_B6QZR2 Sensory box/ggdef family protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZR2_9RHOB Length = 1031 Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 186/527 (35%), Positives = 298/527 (56%), Gaps = 22/527 (4%) Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 + + G I N + + G ++ G S+ A R R ++ E Sbjct: 464 ISTDGIIVECNHVLYELLGYSAGEMRGSSLLS-----HVAPDYREKARAAIQANEPTPNE 518 Query: 187 LWIPTCKGQRLFL-FRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 + + + G+R+ + R + + G +E + + D+ +++ + R+ LA D +TGL Sbjct: 519 VILLSKTGERIPIEVRGRLMEVG---DENLRVSAVRDMRKQKEDEARILHLAQHDMLTGL 575 Query: 246 PNRNAMQDLIDHAINH---ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 PNR ++ AI + A+ V+ LDLD FK +ND YGH GD+L++ V+ + + Sbjct: 576 PNRTYFRERFQQAIENQACAEETISAVMVLDLDRFKDINDLYGHPVGDKLIQTVARRLNA 635 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGL-IEVYTSCSVGI 360 C+ H +AR GGDEF ++ N +A + + ++I+ L P +G I + TS S+GI Sbjct: 636 CVTHHDTVARLGGDEFAIIQVNLKTTAEVGLLTNKIIEVLSKPIHVGNNITIRTSASIGI 695 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 AL PEHG+D ++ AD A+Y AKE GR F F +M + + ++ +LR ALEN+ Sbjct: 696 ALIPEHGTDPDELMSKADIALYEAKEAGRNTFAFFEDKMEEAILLRRTMEGDLRNALENE 755 Query: 421 QLVIHYQPKITWRGEVRSL---EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 +L +H+QP+ R + RS+ EAL+RW PE+GLI P +FI AEESGLI+P+GRWV+ Sbjct: 756 ELQLHFQPQ--ARSDTRSIVGFEALLRWNHPEKGLIAPNNFIPVAEESGLIIPIGRWVLN 813 Query: 478 DVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 + Q ++W ++ RV VN+S Q D+ + ++ L +++E+TES LI Sbjct: 814 EACAQASQWPER---YRVGVNLSPVQFCDEYLIQEVEGALARSGLTPERLELEITESVLI 870 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 +D AL+ ++Q +LG + LDDFGTGYSSLS L RFP D +K+D+ FV + + P Sbjct: 871 HDDRRALNTLRQLKELGITIALDDFGTGYSSLSYLRRFPFDRLKIDRSFVSGVTQTPELA 930 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 +++RA++ + QAL ++VIAEGVE+ E L +E QG+L +P Sbjct: 931 AIIRAVIDLGQALGMEVIAEGVETEPELELLRNESCDEVQGYLIGRP 977 >UniRef50_A4JTT5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JTT5_BURVG Length = 884 Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 191/538 (35%), Positives = 297/538 (55%), Gaps = 9/538 (1%) Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE-HDVIGQSVFKLFMSRREAAASRRN 172 ++V+ E A+ + D G I NR G ++ ++G+++ +L + + N Sbjct: 338 DRVLQELTDAVYVRDRDGRIVVANRKFGLLFGAEDTRSLVGKNIVELLAHTTKQMVAEVN 397 Query: 173 NRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQER 232 NRV G +E+ T + V SG++ + +C D+T R+ + + Sbjct: 398 NRVLNSHGAPMSLEIETTTHSAVLPIEYTFSAVDI-SGQSHV--LCQMRDVTTRRQYEAQ 454 Query: 233 LRILANTDSITGLPNRNAMQDLIDHAINHADNNKVG--VVYLDLDNFKKVNDAYGHLFGD 290 L A D ITGLPNR D + +A++ + + G V+++DLD+FK+VND GH FGD Sbjct: 455 LVKQATFDEITGLPNRRLYIDRLSNALHRSKRDGTGCAVMFIDLDHFKRVNDTLGHPFGD 514 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGL 349 QLL + + L +AR GGDEF++L S+ T +A I+ PF + Sbjct: 515 QLLIAAAQRLSGLLRPGDTVARFGGDEFVLLMSDFTDPMECRIVAEGIVEAFAAPFEVAA 574 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWL 409 + SVG+++ P G++ +++HADTAMY AK GR FC F +MN RV + L + Sbjct: 575 RSISVGASVGVSVFPGDGTEPDILLQHADTAMYEAKSAGRSGFCFFNHDMNARVHDMLRI 634 Query: 410 DTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 D +R AL +++ + YQP I E+ EAL RW S + G +PP FI AEE+GLI Sbjct: 635 DARIRSALARNEISVLYQPIIDPVTREIVKAEALARWHSEDLGHVPPDKFIPVAEENGLI 694 Query: 469 VPLGRWVILDVVRQVAKW-RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPI 527 +G WV+ + AKW ++ + V+VN+SA+Q D T ++ L+ + Sbjct: 695 AQIGDWVLQEACMNAAKWSKELASPITVSVNVSAKQFDDPTFVDSVFAALETSKLPAHLL 754 Query: 528 DVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFV 587 ++E+TE LI +DE AL I ++G + LDDFGTGYSSLS L +FP++ IK+D+ FV Sbjct: 755 ELEITERVLISDDETALETISALREIGVGLSLDDFGTGYSSLSYLTKFPLNTIKIDRAFV 814 Query: 588 RDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 RD+ +Q+L RAI+A+A++L+L++IAEGVE+ ++ L G QGF F +PM Sbjct: 815 RDLDHDEQTQNLTRAIIAMAKSLDLKLIAEGVETQEQADKLVLYGCEYLQGFYFGRPM 872 >UniRef50_D2M2P9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M2P9_BACS4 Length = 696 Score = 325 bits (833), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 164/442 (37%), Positives = 270/442 (61%), Gaps = 5/442 (1%) Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLD 273 +I + D+TE R AQ+++ +A D +T LPNR ++ ++ + A N K+ V+++D Sbjct: 247 VIINYHDVTEMREAQQKIHHMAYHDYLTDLPNRRYFEEQLEAELQDAKTNRSKLAVLFID 306 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEA 332 +D FK +ND GH GD+ L++++ ++S + ++AR GDEF++L + ++ Sbjct: 307 IDRFKFINDTLGHHVGDKALKEIAEMLVSLVSEKDLIARMAGDEFMILVPHIEALDYVKE 366 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 +A IL R+ P E++ + S+GI+ PE G D + I+++AD AMY AKE F Sbjct: 367 LADSILKRMESPIVFDHYELFVTGSIGISTYPESGEDISVILKNADLAMYKAKETKENSF 426 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERG 451 FTPEM + ++ L +LR+A+ N++ ++YQPK++ E V +EAL+RW P G Sbjct: 427 EFFTPEMEENSYKNFALQNDLRRAITNNEFELYYQPKVSASTEKVVGVEALIRWNHPTLG 486 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIF 510 ++ P FI AE++GLIVP+G WV V +QV +W + G L V++N SA Q+ + + Sbjct: 487 MVSPGHFIPIAEDTGLIVPIGEWVFDAVCKQVKRWENTGFPPLVVSLNFSAIQMLQKGLV 546 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 T +K +L++ E I+VE+TES ++E+D L+ ++ QLG + +DDFGTGYSSLS Sbjct: 547 TKVKNLLEKNQVEGHWIEVEMTESLILEHDNDILNKLEGLKQLGIHIAIDDFGTGYSSLS 606 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L ++ + IKLD+ F+ DIH +Q+++ I+ ++ LN++V+AEGVE ++ L K Sbjct: 607 YLKKYKFNTIKLDKSFINDIHTSADNQAIITFIIQLSNQLNMKVVAEGVEIKEQHDILQK 666 Query: 631 NGINERQGFLFAKPMPAVAFER 652 +E QGF F++P P FE Sbjct: 667 LNCDELQGFYFSRPKPVKEFEE 688 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 325 bits (833), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 190/571 (33%), Positives = 306/571 (53%), Gaps = 16/571 (2%) Query: 101 AVARDLSHGLSFAEQV-----VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 + RD++ + +Q+ E+ +++ D+ G I R N+ TG +VIG++ Sbjct: 441 GITRDVTASMHAKQQLRIAATAFESQEGMLVTDAVGAILRVNQAFTRITGYTADEVIGKN 500 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 L R +A + R+G +E E+W G +G N + Sbjct: 501 PRILNSGRHDAYFYKEMWERIKRTGE-WEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVN 559 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI-NHADNNKVG-VVYLD 273 + + DIT + ++E +R LA D +T LPNR +QD + A+ + + K G ++++D Sbjct: 560 YVATLMDITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILFID 619 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL--- 330 LDNFK +ND GH GD LL V++ + SC+ +AR GGDEF+V+ + S + L Sbjct: 620 LDNFKNLNDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLEDLSDNILDAA 679 Query: 331 ---EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEG 387 E++ S+IL L +P+++G+ S S+G L ++ + +++ AD AMY AK+ Sbjct: 680 EQTESVGSKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIAMYQAKKA 739 Query: 388 GRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQS 447 GR F P M Q + L L+ LRKA+E DQ ++YQ ++ EAL+RW Sbjct: 740 GRNTMRFFDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQVDETHRPLGAEALLRWMH 799 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLA 505 PE GL+ P +FI AEE+GLIVP+G WV+ Q+ W + NL +++N+SA+Q Sbjct: 800 PEHGLMAPAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFH 859 Query: 506 DQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTG 565 ++ + + + +ELTES L+EN + + + + G LDDFGTG Sbjct: 860 QPDFVDQVQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTG 919 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YSSL L R P+D +K+DQ F+++I ++V I+A+AQ++ + VIAEGVE+ ++ Sbjct: 920 YSSLQYLKRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQR 979 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 L + G N QG+LF+KP+P FE+ R Sbjct: 980 QLLLRKGCNHFQGYLFSKPVPVEQFEKLLHR 1010 >UniRef50_C1DA12 Sensory box/GGDEF family protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DA12_LARHH Length = 1041 Score = 325 bits (833), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 170/451 (37%), Positives = 271/451 (60%), Gaps = 4/451 (0%) Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 R +++ + L+ + D+T+++ +E++ A+ D++TGL NR+A+ + AI Sbjct: 557 RGQYIAAAEDTAAARLVGTVNDVTDQKENEEQIERYAHFDALTGLANRHALYRRLGQAIT 616 Query: 261 --HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 H + + V+++DLD FK +ND GH GD +LR+V+ + D +LAR GGDEF Sbjct: 617 SVHQHQHPLAVLFVDLDKFKTINDTLGHAVGDVVLREVAGRLSDFAGPDDILARLGGDEF 676 Query: 319 LVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHAD 378 L++ + A +A+ ILT + +P R+ E+ T+ ++G++L P G ++ +IR+AD Sbjct: 677 LLVLPGADERAASEVAACILTAMSVPVRVDGRELPTTPTIGVSLYPRDGEEADDLIRNAD 736 Query: 379 TAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVR 437 AMY AK GR F ++TP+MN E L L LR A ++++HYQP+I G V Sbjct: 737 IAMYQAKARGRNTFQLYTPDMNAAAAERLQLQGELRNAHLRGEIMLHYQPQIDVTDGHVV 796 Query: 438 SLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVA 496 EAL+RW+ P G++ P FI AEESGLI+ LG W I + RQ W+ G+ L VA Sbjct: 797 GCEALMRWKHPTLGMVSPGRFIPLAEESGLIITLGNWAIREACRQAMVWQRAGLPPLTVA 856 Query: 497 VNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQ 556 VN+S Q + L + + +++ELTES ++ + E ++ + + LG Q Sbjct: 857 VNLSGCQFQQSNFTAVVADALADTSLPPQYLELELTESIVMHDVEQVIATLTELKALGVQ 916 Query: 557 VHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIA 616 + +DDFGTGYSSL+ L RFP+D +K+DQ FVRD+ P ++VRAI+A+ + LNL++IA Sbjct: 917 LSIDDFGTGYSSLNYLKRFPVDLLKIDQGFVRDVETDPSDAAIVRAIIALGKILNLRLIA 976 Query: 617 EGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 EGVE+ + +L G++ QG+ F++P+PA Sbjct: 977 EGVETQGQLDYLHAAGVDFIQGYYFSRPLPA 1007 >UniRef50_Q2Y9Y0 Response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q2Y9Y0_NITMU Length = 756 Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 179/453 (39%), Positives = 279/453 (61%), Gaps = 29/453 (6%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 DIT+ ++A ++L ++ D++T LPNR + + I ++ N V V++LD+DNFK Sbjct: 276 DITQRKQADQQLLQVSRYDALTHLPNRILFYESLRKVIKQSEMNHRIVSVLFLDIDNFKN 335 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF---LVLASNTSQSALEAMASR 336 +ND G GD+LLR+ SL +L CL ++AR GGDEF LV A + + L +AS+ Sbjct: 336 INDTLGFALGDELLREFSLRLLECLRVTDIVARIGGDEFGCILVSADDLGNAGL--VASK 393 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 I LR PF + +V + S+GI++ P D+ ++++ DTAMY +K GR + FT Sbjct: 394 IREALRQPFDLQGHQVTVTASIGISVYPIDSIDADTLVKNGDTAMYQSKTAGRDTYRFFT 453 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPP 455 PEMN R E L + LRKAL+ ++ V+HYQPK+ G V +EAL+RW+ PE G++ P Sbjct: 454 PEMNIRAIEKLDQENALRKALDREEFVLHYQPKVDLSNGWVTGMEALLRWKRPEHGVVEP 513 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQT------ 508 L+FI E++GLI +G WVI V RQ+A+WR GI + V+VN+S RQ + T Sbjct: 514 LEFIPALEQTGLITRVGAWVIESVCRQIAEWRHAGIGEIPVSVNVSGRQFSRSTLNQDVI 573 Query: 509 -------IFTAL-------KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLG 554 I AL ++ L+E + + +++ELTES L+ + + +S++Q+ LG Sbjct: 574 RATQANGIQPALLEFELQTERALRENSIDSDLLELELTESSLMMHAKKTVSILQRLKALG 633 Query: 555 AQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQV 614 Q+ +DDFGTGYSSL+ + RFPID +K+D+ F+++I ++ AI+ +A +L+++V Sbjct: 634 IQISIDDFGTGYSSLAYVKRFPIDVLKIDRSFIQEITTNSADAAITTAIIDMAHSLHVRV 693 Query: 615 IAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 +AEGVE+A++ FL G +E QGF + P+PA Sbjct: 694 VAEGVETAEQFDFLKGRGCDEVQGFYLSPPLPA 726 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 193/565 (34%), Positives = 304/565 (53%), Gaps = 13/565 (2%) Query: 102 VARDLS-----HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 V RDL+ L A +++ + I+I S I + N TG KEH+VIG+ Sbjct: 268 VQRDLALQHSQRNLYLANKIIDSSLDGIMITHSNSTIMQVNPAFTQLTGYKEHEVIGKCP 327 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 L R + + + ++G ++ E+ G + ++ Sbjct: 328 SILSSGRHDKSFYIKMWDAINKTG-VWQGEICNRKKNGDIYIEWLTIIEIKEPNNSDAIY 386 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDL 274 +DITE + A++++ LA D +TGLPNR D + A+ H D + + V+++DL Sbjct: 387 AAIFSDITERKNAEDKIVQLAYFDELTGLPNRRLFNDRLKMALAAAHRDQHLLAVMFIDL 446 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA 334 D FK+VND+ GH GD LL V+ I + L LAR GGDEF+VL A+ ++A Sbjct: 447 DRFKEVNDSLGHSAGDCLLTLVAARIEATLNEGDTLARLGGDEFVVLCEINKIDAVASLA 506 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 +IL L PF++ +EV + S+G A+ P+ G DS +++HAD AMY +K+ GR F + Sbjct: 507 DKILNNLNSPFQLDHVEVGVTASIGAAVYPDDGLDSETLLKHADIAMYRSKDVGRNSFQL 566 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLI 453 F P MN R E L + + + AL+N++ +++QPK + E + +EAL+RW P+ G+I Sbjct: 567 FKPSMNARSLERLAMMSRFQHALDNNEFELYFQPKQCLKSEQIMGVEALLRWHDPDLGMI 626 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTA 512 P FI AEE GLIV L WVI + + W+ +G + R+A+NISA L+ + Sbjct: 627 SPAQFIPLAEELGLIVRLDLWVINQAGKVLTLWQKEGLVAGRLAINISACHLSQGKLANN 686 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + +L+ N +++ELTES I + A + +QQ +LG + LDDFGTGYS+LS L Sbjct: 687 IGTMLKHYNLPGSLLEIELTESSFISSFTQAKTQLQQLKKLGVHIALDDFGTGYSALSYL 746 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 + P D +K+D F+ I + + +V A++A+A LNL V+AEGVE + +L G Sbjct: 747 TKLPFDTLKIDASFIAKIPDEYGNSQIVAALIALASNLNLMVVAEGVEQPAQKNYLISLG 806 Query: 633 INERQGFLFAKPMPAVAFERWYKRY 657 N QG+ + +P+ +W+ Y Sbjct: 807 CNVIQGYYYCRPLTQ---RQWFDFY 828 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 172/433 (39%), Positives = 266/433 (61%), Gaps = 9/433 (2%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKK 279 DIT ++ ++ L +N D++TGL NR + D I AI HA+ V LDLD FK Sbjct: 319 DITIRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVFLLDLDRFKV 378 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRIL 338 +ND+ GH GD +L V+ + +C+ L+R GGDEF ++ ++ + A MA +IL Sbjct: 379 INDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPADARIMAQKIL 438 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAK-EGGRG-QFCVFT 396 PF +G E+ + S+G +L P G S ++RHAD AMY AK +GG G QFC + Sbjct: 439 NAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGGNGFQFC--S 496 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPP 455 EM+ R + L L+ +LR+AL+ V+HYQPK+ G++ EALVRW P++G+I P Sbjct: 497 EEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHPDKGMISP 556 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALK 514 DFI AEE+GLI+ LG WV+ + RQ W+ +G+ +++AVN+SARQ +++ Sbjct: 557 DDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQSDFVESIQ 616 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 +L E + + +D+ELTES ++E+ + ++ + Q+G + LDDFGTGYSSL+ L R Sbjct: 617 TILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYSSLNYLRR 676 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 FPID +K+D+ F+ D+ + S+ +++ +A +L + IAEGVE+ ++ AFL + Sbjct: 677 FPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAFLAMCECD 736 Query: 635 ERQGFLFAKPMPA 647 QG+LF+KP+PA Sbjct: 737 SIQGYLFSKPLPA 749 >UniRef50_Q5NZD7 Putative signal transducer protein with histidine kinase domain n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZD7_AZOSE Length = 920 Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 203/555 (36%), Positives = 309/555 (55%), Gaps = 25/555 (4%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L+ A + A +VI G I NR TG + +VIGQ + L EA + Sbjct: 363 LALAATALDSAVEGVVIARG-GRIATVNRAFTSITGYRSAEVIGQPLAILLA---EAEKT 418 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQR----LFLFRNKFVHSGSGKNEIFLICSGTDITE 225 RN+R E W G+R ++ + + G +E+ L+C +DI+ Sbjct: 419 HRNDR----RRAMCETGQWQGEVHGRRKNGEMYPAWSSISRAAYGSDEMILVCVFSDISA 474 Query: 226 ERRAQERLRILANTDSITGLPNR----NAMQDLIDHAINHADNNKVGVVYLDLDNFKKVN 281 ++ + RL+ LA+ D++T LPNR + D++ A H N + ++++DLD FK +N Sbjct: 475 AKQYEARLQHLAHYDALTELPNRLLFRERLADMLVRAERH--GNMLALLFIDLDGFKPIN 532 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA--MASRILT 339 D GH GD+LLR V+ + C+ AR GGDEF VL +S EA +A IL Sbjct: 533 DTLGHAAGDELLRRVAERLGGCVRASDTTARLGGDEFAVLLDEL-RSPEEAGIIARNILD 591 Query: 340 RLRLPFRI-GLIEV-YTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L P+ + G + Y S S+GI P D+ ++R AD AMY AK+ G+ ++ F P Sbjct: 592 TLERPYILAGQPQCQYISASIGIGCYPSDSLDAETLLRQADMAMYRAKQEGKNRYRFFAP 651 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPL 456 E+N + E L++ +LR AL+ D+L + +QP + + EV +EALVRW+ P++G I P Sbjct: 652 EINAQASERLFMANSLRAALDRDELRLVFQPCMDFATLEVAGVEALVRWEHPQKGTILPS 711 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQ 515 FIS AEESGLI P+G WV+ + R+V +W++ GI RVAVN+S RQ + + L Sbjct: 712 RFISLAEESGLIEPIGEWVLREAARRVREWKNAGIFAGRVAVNLSPRQFRRSDLASRLLV 771 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 VL E +++E+TE ++E+ E A+ V+ + G + +DDFGTGYSSL+ L RF Sbjct: 772 VLDEAGLAPRDLELEVTEGMIMEHPERAVVVLTELVAAGVSISIDDFGTGYSSLAYLKRF 831 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P+ ++K+D+ FV + +SL RA+VAVA++L L V+AEGVE A + FL + G + Sbjct: 832 PVHSLKIDRSFVSGLPGDRNDRSLTRAVVAVAKSLGLSVVAEGVEHAGQVDFLRRIGCDF 891 Query: 636 RQGFLFAKPMPAVAF 650 QG F++P+ A Sbjct: 892 AQGHYFSRPLDPAAL 906 >UniRef50_C6PSS6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PSS6_9CLOT Length = 916 Score = 325 bits (832), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 185/585 (31%), Positives = 331/585 (56%), Gaps = 26/585 (4%) Query: 91 GNASAWHDTPAVA------RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 G +HD + + L+ LS +++++S A I+I DS GNI + N E + Sbjct: 337 GRLFMFHDVTKIQEYTNNLKQLNEELSISDRIISTAMEGILITDSSGNIIKVNNSFERIS 396 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN------AYEVELWIPTCKGQRLF 198 G K ++IG++ R + N + N +E E+W G+ Sbjct: 397 GYKGEELIGKN-------PRVLKSGHHNKSFYLNMWNDLLTYGYWEGEIWNRKKNGELYP 449 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 + + G I TDIT+ ++ +++L+ LA D +TG+PNR + +++A Sbjct: 450 KWMSITCLKKQGGIIENYIAISTDITKIKKTEDKLQSLAYYDLLTGIPNRTLFYERLENA 509 Query: 259 INHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGD 316 + A+NNK V ++++DLD FK +ND+ GH GD LL++V+ I S + ++R GGD Sbjct: 510 LIRANNNKGSVALLFMDLDGFKVINDSLGHAAGDLLLKEVAARIESSISRSDTVSRLGGD 569 Query: 317 EFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIR 375 EF V+ N + +A A I+ ++ LP+ I E+ S+GIALSP S ++R Sbjct: 570 EFTVILENVNNHEDAKAAAESIIGKILLPYSILGREITLGVSIGIALSPYDESTVEGLVR 629 Query: 376 HADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW--- 432 AD AMY AKE G+G++ + E+ +R E L + L KAL+N++ ++ QP+I + Sbjct: 630 KADAAMYDAKESGKGKYSFSSDEIERRNHEILEMQIKLNKALDNNEFNLYLQPQIIFAEN 689 Query: 433 RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN 492 ++ EAL+RW++ + + P FI +E + +I+P+G W++ ++ R +D GIN Sbjct: 690 EFKIIGAEALIRWKTIDGKIFTPDKFIPVSETNRMIIPIGNWILEEIFRIDKVLKDNGIN 749 Query: 493 LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQ 552 +++++NIS++Q + + + +K++ +E + + + +E+TES L+++ E A+ + + + Sbjct: 750 IKLSINISSKQFENGNLVSKIKELFKENDSQNIDLVIEITESFLLQDTESAIQSLLEIKK 809 Query: 553 LGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNL 612 LG ++ +DDFGTG+SSLS LAR P+D +K+D+ F+ DI ++L I+++A+ LNL Sbjct: 810 LGIEISIDDFGTGFSSLSYLARLPVDYLKIDKSFIDDILSTN-HKNLTSNIISMAKTLNL 868 Query: 613 QVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 + +AEGVE+ ++ L G +E QG+ F+KP+ F ++ K++ Sbjct: 869 KTVAEGVETEEQANRLMDEGCDELQGYYFSKPLIIDDFIKYVKQF 913 >UniRef50_B7JWK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Cyanothece RepID=B7JWK6_CYAP8 Length = 1143 Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 174/460 (37%), Positives = 284/460 (61%), Gaps = 11/460 (2%) Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 R++ V+ GK+ + + +DITE ++A+E+L+ A D++T LPNR D ++HA+ Sbjct: 674 RSRLVYDEQGKS-LRIDGINSDITERKQAEEQLQYNATHDTLTQLPNRLLFMDRLEHALE 732 Query: 261 H---ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDE 317 + V++LDLD FK +ND+ GH GD+LLR+++ + L D LAR GGDE Sbjct: 733 RRRRYSDPLFAVLFLDLDEFKVINDSLGHALGDELLREIARRLQKSLRADDTLARLGGDE 792 Query: 318 FLVLASNTS--QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIR 375 F +L + A++ +A RI L PF + E++T+ S+GIALS ++ I+R Sbjct: 793 FTILLEEIHDVKDAIK-IAERIHKDLTRPFNLEGQEIFTNTSIGIALSNGEYEAASEILR 851 Query: 376 HADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE 435 ADTAMY AK GG+ + +F +M+ L L+T+LR+A+E + +++YQP I+ + + Sbjct: 852 DADTAMYRAKAGGKACYAIFDQQMHASAVSRLQLETDLRRAIERQEFLVYYQPIISLQHD 911 Query: 436 -VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-- 492 + EAL+RWQ P++GL+PP FI AEE+GLIVP+G W++ +Q+ W+ + N Sbjct: 912 TLTGFEALIRWQHPQQGLVPPARFIPIAEETGLIVPIGEWILEQAAQQLKIWQTQYRNYE 971 Query: 493 -LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFS 551 L+++VN+S++QL D ++ + ++L + + + VE+TES L+EN ++A V+ Sbjct: 972 SLKMSVNLSSKQLRDASLLGTIDRILSKTEIDNNALKVEITESILMENVQVAADVLIALR 1031 Query: 552 QLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALN 611 + ++ LDDFGTGYSSLS L RFP++ +K+D+ FV + + +VRAIV++A L Sbjct: 1032 ERNIEICLDDFGTGYSSLSYLHRFPVNTLKIDRSFVMRMRPNDENSEIVRAIVSLAHILG 1091 Query: 612 LQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 +++IAEG+E+ + A L G + QG+ FAKP+ E Sbjct: 1092 MEIIAEGIETELQLAQLKWIGCEQGQGYFFAKPLATSEVE 1131 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 324 bits (831), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 196/542 (36%), Positives = 305/542 (56%), Gaps = 7/542 (1%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 Q V ++ ++IVI D NI+ N TG +V+G++ ++ S + + Sbjct: 752 QAVEQSPNSIVITDLNANIEYANDAFVKTTGYTLPEVMGKNP-RILHSGKTTVETYAAMW 810 Query: 175 VFFRSGNAYEVELWIPTCKG-QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 SG + EL G + + L R + G+ +L DITE+++ + R+ Sbjct: 811 TQLNSGQMWRGELINRRKDGTEYVELARISPLRHTDGRVTNYLSIK-EDITEQKQVEARI 869 Query: 234 RILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQ 291 R LA+ D +TGLPN+ ++D A+ A + + V++LD+D+FK +ND GH GD+ Sbjct: 870 RQLAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHFKNINDTLGHRIGDE 929 Query: 292 LLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIE 351 LL ++ + L + L+R GGDEF+++ +T +A +IL + I E Sbjct: 930 LLVHLAKRMKLLLRDEDTLSRFGGDEFILVLPDTDADGAAHVAEKILETVAKTCYIEQHE 989 Query: 352 VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDT 411 + + S+GIA+ P G D + + AD AMY AK+ GR F FT EM R L L+ Sbjct: 990 LVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEMQARSARRLLLEN 1049 Query: 412 NLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 LR+AL +Q +HYQP+I+ + G++ EAL+RW PE G I P +FI AEESGLI+ Sbjct: 1050 ALRQALSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEFIPVAEESGLILS 1109 Query: 471 LGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDV 529 +G WV+ V+QV +W+D G + VA+N+SA Q + + Q+L E N I++ Sbjct: 1110 IGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQILHEANLAPHWIEL 1169 Query: 530 ELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRD 589 ELTES ++N +A+ V+ G ++ +DDFGTGYSSLS L +F ++ +K+DQ FVRD Sbjct: 1170 ELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKVNKLKIDQSFVRD 1229 Query: 590 IHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVA 649 + S+++V AI+ +A ++ Q IAEGVE+A + AFL G NE QG+ F++P+ Sbjct: 1230 LADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQGYYFSRPLTVAL 1289 Query: 650 FE 651 FE Sbjct: 1290 FE 1291 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 324 bits (831), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 196/556 (35%), Positives = 306/556 (55%), Gaps = 20/556 (3%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L +Q ++ +++I D+ G+I+ NR E TG +VIG++ +L S + + Sbjct: 472 LKILKQATEQSPVSVIITDAEGHIEYVNRKFEKLTGYTRQEVIGKNP-RLLKSGKISQDQ 530 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG---KNEIFLICSGTDITEE 226 + SG + E G+ F S S KNE +I I E+ Sbjct: 531 YKQLWRTLTSGQEWHGEFHNQKKNGEL-------FWESASISPIKNEEGVITHFIAIKED 583 Query: 227 ---RRAQER-LRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKV 280 R+AQ+R L AN D++TGLPNR D + AI A+ +V V+++DLD FK V Sbjct: 584 ITRRKAQDRILAYQANYDALTGLPNRFLAIDRLKLAILQAERQEQRVAVMFIDLDRFKNV 643 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILT 339 ND GH +GD LL+ V+ + CL +AR GGDEFL++ N Q S + +A +IL+ Sbjct: 644 NDTLGHEYGDLLLKQVAERLKKCLRKSDTVARLGGDEFLIIIPNLKQPSHCKGIAKKILS 703 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 L PF + E + S S+GI L P+ G D A++R+ADTAMY K GGR F +T M Sbjct: 704 SLEKPFNLLEEEAFISASIGITLYPDDGDDVNALMRNADTAMYLGKRGGRNDFKFYTLGM 763 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDF 458 N+ + ++ L +AL+ ++ + YQP + + E V EAL+RW +P+ G + P F Sbjct: 764 NETNRTRIIIENLLHQALKKKEIYLVYQPIMELKTEKVIGAEALLRWNNPQLGQVSPDQF 823 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQ 518 I AEE+GLI LG WVI ++V +W+ +G + VAVN+S RQ D + + + Sbjct: 824 IPIAEETGLINQLGAWVISQACQEVVQWKAQGTPISVAVNLSPRQFRDSKLLKIITDAIA 883 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 +++E+TE L+E+ + ++ Q Q+ + +DDFGTGYS+LS L +FP + Sbjct: 884 VNGITNHDLELEITEKLLLEDSPGSQGILSQLHQMNFPLSIDDFGTGYSALSYLIKFPFN 943 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+D+ F+ D+ + LV+ I+A++ LNLQVIAEGVE++++ L G + QG Sbjct: 944 RLKIDRSFITDMTHSQKAMGLVKTIIAMSHGLNLQVIAEGVETSEQLNSLKSQGCDYAQG 1003 Query: 639 FLFAKPMPAVAFERWY 654 + F++P+ F R+Y Sbjct: 1004 YFFSRPLTGEEF-RYY 1018 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 324 bits (831), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 196/545 (35%), Positives = 302/545 (55%), Gaps = 10/545 (1%) Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 A V ++I D++ I NR TG +VIG+S L R +AA Sbjct: 268 AATVFENTGEGVIIADAKNRIIAVNRAFTVITGYGPEEVIGRSPNLLRSGRHDAAYYDAM 327 Query: 173 NRVFFRSGNAYEVELWIPTCKGQRLF--LFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 R +G+ ++ E+W G+ +F L V +GK + + +DI+ + + Sbjct: 328 WRGVHEAGH-WQGEIWNRRKNGE-IFPELLTLSVVRDHNGKVSHY-VGVFSDISRMKETE 384 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLF 288 RL+ LA+ D++T LPNR + + H + + + V++LD+D FK VND+ GH Sbjct: 385 ARLQRLAHYDALTDLPNRVLLNLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPV 444 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRI 347 GD+LL +++ + S + + LAR GGDEF++L S + + A I+ L F++ Sbjct: 445 GDELLIEIARRLRSRIRAEDTLARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQL 504 Query: 348 GL-IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 EV+ S+GI+L P D+T +I +AD A+Y AKE GR + +T ++ + E Sbjct: 505 ASGQEVFVGASIGISLYPLDTDDATQLISNADAALYQAKEAGRNVYRFYTADLTRAAHER 564 Query: 407 LWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEES 465 L L+ LR+ LE + V+H+QP + +GEV EALVRW P G+I PL FI AEE+ Sbjct: 565 LGLEAALRRGLERGEFVLHFQPVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEET 624 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 GLIVPLG WV+ RQ +W D G L +AVN+S RQ + ++ +L F Sbjct: 625 GLIVPLGEWVLESACRQGREWLDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAA 684 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 +++E+TES ++E+ + A++ + LG ++ +DDFGTGYSSL+ L RF +DA+K+D+ Sbjct: 685 LLELEITESTVMEDADRAVATLAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRS 744 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 FVRDI + +V +VA+A + L VIAEGVE+A++ AFL G QG+L +P Sbjct: 745 FVRDIADDENDRMIVATVVAMAHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQ 804 Query: 646 PAVAF 650 A F Sbjct: 805 AAADF 809 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 324 bits (830), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 198/563 (35%), Positives = 298/563 (52%), Gaps = 5/563 (0%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 G A+ D D GL A +V + AI + D I N E TGL + Sbjct: 234 GRVYAFRDITQRLHD-EQGLKLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAE 292 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 ++GQ + + RSG+ ++ E+ G + + Sbjct: 293 LVGQRLDRSLRLWANETLDPDIRAALDRSGH-WQGEIEQHHADGSTFPCLVSLMRVLDTE 351 Query: 211 KNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVG 268 + D++E A++R+ LA D++TGLPNR + + ++ +I A +N + Sbjct: 352 GLPFHYVGFVKDLSETVEARQRIEQLAFNDALTGLPNRLRLTERLEFSIELARRENTRFA 411 Query: 269 VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS 328 V+++D+D FK +ND+ GH+FGD++L +V+ I CL H +AR GGDEF++L Sbjct: 412 VLFIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGGDEFVLLLHRVESH 471 Query: 329 ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 E +A R+L + PF + ++ SCS+GIAL PE G +I++AD+AMY KE G Sbjct: 472 GAELVARRLLESMAQPFELDGLKFSLSCSIGIALYPEDGETLDDLIKNADSAMYHVKEHG 531 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQS 447 RG C + +MN + E + +D +R+AL+ + YQP+I G V EALVRW Sbjct: 532 RGDCCFYQRQMNVGLLERVRIDHAMREALQQGHFWLAYQPQIDLVSGLVIGAEALVRWND 591 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQ 507 P+ G + P FI AEE+G IV LG WV+ + +RQ A W+ +GI L ++VN+SA Q Sbjct: 592 PDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIRLSLSVNVSATQFHQA 651 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 L Q L E +++ELTES LI+N E L ++ LG ++ +DDFGTGYS Sbjct: 652 NFIDLLAQWLDETGLPPGRLELELTESILIQNVEETLRRLENLVALGVRLAIDDFGTGYS 711 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SL+ L RFPI +K+D+ FV DI ++ A++ +A L L+VIAEGVE+ + F Sbjct: 712 SLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLRVIAEGVETDIQRQF 771 Query: 628 LTKNGINERQGFLFAKPMPAVAF 650 L G +E QG+L A + AF Sbjct: 772 LLDAGCHEFQGYLCAPALEPAAF 794 >UniRef50_B7RSV6 Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RSV6_9GAMM Length = 763 Score = 324 bits (830), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 176/449 (39%), Positives = 277/449 (61%), Gaps = 20/449 (4%) Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFK 278 T + + R + RLR +A D++T LPNR + + + A NK + +++LDLDNFK Sbjct: 296 TAVKQVTRTKNRLRKMAYYDALTSLPNRRLFTEQLSLLLKLAQRNKQTLALLFLDLDNFK 355 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA------------RPGGDEFLVLASNT- 325 ++ND+ GH GD LLR+V + C+ V+A R GGDEF V+ ++ Sbjct: 356 RINDSLGHSAGDLLLREVGQRLSKCVRDSDVVAHYADPTAKIDVSRLGGDEFTVVLNDLD 415 Query: 326 SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAK 385 + ++ +A R++ L P I E+ + S+GIA++PEH ++ ++R +DTAMY AK Sbjct: 416 APESVGVVAERLILALSEPMLIDGHELVITPSIGIAIAPEHANEVEGLLRCSDTAMYHAK 475 Query: 386 EGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVR 444 G+ + V+ M + + L L+ +LRKA++ND+LV+ YQP++ R G+V EAL+R Sbjct: 476 ASGKSTYLVYESSMEEAGLDRLTLENDLRKAMDNDELVLFYQPQVDTRSGKVVGAEALLR 535 Query: 445 WQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQ 503 W PE+GLIPP FI AEE GLI +G WVI + +QV + KG++L +VAVN+SA Q Sbjct: 536 WMHPEQGLIPPFKFIPLAEEMGLIGEMGDWVIREACKQVQTFAKKGVSLPKVAVNVSALQ 595 Query: 504 LADQTIFTA-LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDF 562 FT +K +L EL + +++ELTE ++ + ++ + + LG + +DDF Sbjct: 596 FTPS--FTRRVKSILDELAVDPATLELELTEGVVMGDTNASVQALAELKDLGVSLSIDDF 653 Query: 563 GTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESA 622 GTGYSSLS L+RFP+D +K+D+ FV + + SLVRAI+A+AQ+L L+++AEGVE+ Sbjct: 654 GTGYSSLSYLSRFPLDELKIDRSFVIEANNSEQGASLVRAIIAMAQSLGLELVAEGVETD 713 Query: 623 KEDAFLTKNGINERQGFLFAKPMPAVAFE 651 ++ F+T G + QG++F++P+PA E Sbjct: 714 EQYEFMTTAGAHVIQGYMFSQPVPAEKLE 742 >UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MBY4_DIAST Length = 790 Score = 324 bits (830), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 193/550 (35%), Positives = 299/550 (54%), Gaps = 13/550 (2%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 A VV +V+ D+ G I N G E +++GQ+ ++F S R A Sbjct: 235 LAATVVDNTIEGVVVTDADGRILSVNPAVTRLMGYTEEELLGQNP-RVFKSGRHGPAFYE 293 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS---GSGKNEIFLICSGTDITEERR 228 R ++ E+W G+ +F + S G+ +C TDI+EE+ Sbjct: 294 AMWDTMRQTGHWQGEIWNRRKNGE---VFPERMSLSAVRGADGAVTHYVCMFTDISEEKA 350 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGH 286 +RL LA+ D +TGLPNR + +D A+ A ++ ++ ++ L+LD FK VND+YGH Sbjct: 351 QHQRLEFLAHCDPLTGLPNRAWFGEQLDSAVRQAQDSGEQMALLLLNLDRFKDVNDSYGH 410 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPF 345 GD++LR ++ + L +L R GDE VLA + + A+A ++ P+ Sbjct: 411 AVGDEVLRHITRQVEQSLRPGDLLGRLAGDEIAVLARHLRHADGAAAVARHLIAAASTPW 470 Query: 346 -RIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 I+V SVGI + P H + A+++ A +++Y AK GRG +C F + Q Sbjct: 471 CTPDGIQVVVGVSVGICMFPAHARTTEALLQGAHSSVYGAKARGRGAYCFFDESLIQAAR 530 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAE 463 E L ++ LR AL L ++YQP++ G + EALVRW P+ G+I P FI AE Sbjct: 531 ERLEIEARLRVALAQGHLRLYYQPQVCIVTGRIMGAEALVRWLDPQEGMISPARFIPVAE 590 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNF 522 SG+I PLG+WV+ Q +WR G+ +R+A+N+S RQ + + L+ F Sbjct: 591 TSGVIGPLGQWVMRAACEQGQRWRADGLPEIRLAINLSPRQFQLTDVAACAAEALKASGF 650 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +++ELTES L E + +V+Q+ QLG ++ +DDFGTGYSSL+ L RFPID +K+ Sbjct: 651 PARCLELELTESVLAERPDEIRAVLQRLQQLGVRMAVDDFGTGYSSLAHLKRFPIDVLKI 710 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 DQ F+RDI + ++ AIVA+ +L L V+AEGVE+ ++ AFL + G + QG+L + Sbjct: 711 DQGFIRDIPRSADDMAISAAIVAMGHSLGLSVLAEGVETPQQLAFLRERGCDAYQGYLCS 770 Query: 643 KPMPAVAFER 652 +P+PA F R Sbjct: 771 RPLPAEEFAR 780 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 323 bits (829), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 192/567 (33%), Positives = 304/567 (53%), Gaps = 43/567 (7%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR---- 171 V E + + D+ I R N+ + +G +VIGQS KLF S R+ A + Sbjct: 227 TVFETQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSP-KLFNSGRQDKAFYKEMWN 285 Query: 172 ------------NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 +NR +SG+ Y L I V G G + + + Sbjct: 286 SINTTDAWRGEVSNRS--KSGDIYAKNLTITA-------------VRDGKGVVSNY-VAT 329 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDH--AINHADNNKVGVVYLDLDNF 277 DIT + A E++ LA D +T LPNR + D + H I+ N +++LDLDNF Sbjct: 330 FRDITTSKAASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNF 389 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASR- 336 K +ND GH GD LL+ V+ + C+ ++AR GGDEF+VL N S A+EA Sbjct: 390 KTLNDTLGHDVGDLLLQQVATRLTDCVREGDIVARLGGDEFVVLLENLSLQAIEAANKAK 449 Query: 337 -----ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 I+ L +++ + +++ S+G+ + + + +++ AD AMY +K GR Sbjct: 450 KVAKKIIFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRNT 509 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERG 451 + F M + + ++ +LRKA+E++Q +HYQ +++ G+ EAL+RWQ PERG Sbjct: 510 WHFFNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQVSSSGQTLGAEALIRWQHPERG 569 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTI 509 + P +FI AEE+GLI+P+G+WV+ Q+ W+ + +L +AVNISA+QL + Sbjct: 570 QVSPFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDF 629 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 +K L+ + + +ELTES L+EN ++ + S++G LDDFGTGYSSL Sbjct: 630 VEQVKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSL 689 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 L + P++ IK+DQ FVRD+ +++VR I+ ++ +L++ VIAEGVE+ +E +L Sbjct: 690 QYLKKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLL 749 Query: 630 KNGINERQGFLFAKPMPAVAFERWYKR 656 NG QG+LF+KP+P FE K+ Sbjct: 750 DNGCTHYQGYLFSKPVPINEFEVLLKK 776 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 323 bits (829), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 164/439 (37%), Positives = 262/439 (59%), Gaps = 5/439 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKK 279 DI+E +R + L +A+ D++TGLPNR D + + + + V+YLDLD FK Sbjct: 419 DISERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRFKI 478 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM-ASRIL 338 +ND GH GD LL++V+ + + ++R GGDEF ++ + A + A +IL Sbjct: 479 INDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEKIL 538 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 PFR+ E++ + S+G+ L P G + ++++ADTAMY AKE GR + F+ E Sbjct: 539 HVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQFFSEE 598 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLD 457 MN RV E L ++T LR AL ++ ++HYQP++ T G + +EAL+RWQ P++GLI P Sbjct: 599 MNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILPDA 658 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQV 516 FI AEE+GLI+P+G WV+ + Q W++ G +R++VNIS RQ + ++ + Sbjct: 659 FIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIRGI 718 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L+E + +++E+TES ++ N E A+S++ + ++G + +DDFGTGYSSLS L R P Sbjct: 719 LRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKRLP 778 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 D +K+D+ FV I ++LV I+ + + L ++AEGVE ++ FL + E Sbjct: 779 ADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQEV 838 Query: 637 QGFLFAKPMPAVAFERWYK 655 QG+ F+KP+PA + K Sbjct: 839 QGYYFSKPLPAETLQPLLK 857 >UniRef50_Q74EC6 Sensory box/response regulator n=1 Tax=Geobacter sulfurreducens RepID=Q74EC6_GEOSL Length = 799 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 179/464 (38%), Positives = 279/464 (60%), Gaps = 25/464 (5%) Query: 207 SGSGKNEIFLICSGT--------DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 G +E ++ +GT D+TE R+++E +R LA+ DS+TGLPNR ++++ Sbjct: 310 GGLNTHEARIVANGTGTVLAIVRDVTERRQSEEMIRYLAHHDSLTGLPNRIFFGEMLELV 369 Query: 259 INHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV------- 309 ++ A D +V ++++DLD+FK +ND GH GD LLR+ + + C+ Sbjct: 370 LSRARRDGKQVAILFVDLDDFKLINDTLGHAAGDHLLREAAQRLKGCVRSSDYVASGAES 429 Query: 310 -----LARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 +AR GGDEF++ N S + A+ RI++ FRI E++ S S+GI++ Sbjct: 430 GLCGNIARFGGDEFILSLGNLDSVDDVVAVTQRIISEFSREFRIDGHEIFVSVSIGISMY 489 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P+ D+ +++R+AD AM+ AKE G F FT MN+ + L ++ +LRKALE ++ Sbjct: 490 PDDAEDTGSLVRNADMAMFAAKEEGGPSFRFFTRGMNEAAQQRLSIELSLRKALERGEIF 549 Query: 424 IHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 +HYQPK+ GE+ EAL RW PE GLIPP FI AE++GLIV +G WV+ Q Sbjct: 550 VHYQPKVDLSCGEITGFEALARWHHPELGLIPPDTFIPLAEKNGLIVRIGEWVLRAACAQ 609 Query: 483 VAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 W D+G +L +A+N+S+ Q + + +K+VL E ++ E+TE L+E E Sbjct: 610 ARTWIDEGFSDLCMAINLSSHQFTSGNLTSMVKEVLDETELPPSCLEFEITEGILMERTE 669 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 + ++ + +G ++ +DDFGTGYSSL L RFP++ +K+D+ FVR+I ++++ Sbjct: 670 KTMRILSELRDMGVRISIDDFGTGYSSLGYLKRFPVNTVKIDRSFVREIDSPHEDAAIIK 729 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 AI+AVA+ LNLQV+AEGVES ++ FL +G NE QGFLF KP+ Sbjct: 730 AIIAVARNLNLQVVAEGVESHRQTEFLLAHGCNEAQGFLFGKPV 773 >UniRef50_O34311 Signaling protein ykoW n=3 Tax=Bacillus RepID=YKOW_BACSU Length = 800 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 186/543 (34%), Positives = 306/543 (56%), Gaps = 28/543 (5%) Query: 123 AIVILDSRGNIQRFNRLCEDYT---GLKEHD---VIGQSVFKLF-MSRREAAASRRNNRV 175 AI IL G+I N E+ G HD V +LF +++ A ++ + Sbjct: 267 AIFILSLEGDIISSNHAGEEMISKFGFSMHDWRNYTSLKVKRLFEQVKKDKQAMNSDSDL 326 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 G + IP Q L + I++IC D+T++ +A++ + Sbjct: 327 ITEKGQFHLNITLIPVEVNQEL--------------DSIYVICK--DMTKQYKAEKEIHR 370 Query: 236 LANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLL 293 +A+ DS+T LPNR + +N H+ + V +LDL+ FK +NDA GH GDQLL Sbjct: 371 MAHYDSLTDLPNRRHAISHLTKVLNREHSLHYNTVVFFLDLNRFKVINDALGHNVGDQLL 430 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVLAS--NTSQSALEAMASRILTRLRLPFRIGLIE 351 + + + S + + +AR GGDEF+++ + NT + +A +I+ + + PF+I Sbjct: 431 QFAAKRLSSVVPDNGFIARLGGDEFIIILTDANTGTGEADVLARKIIQKFKKPFKIQDHT 490 Query: 352 VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDT 411 + TS S+GIA+SP+ G+D +++ AD AMY AKE + ++ ++ + + L + Sbjct: 491 LVTSVSIGIAISPKDGTDGLELMKKADMAMYAAKERNKSKYRYYSFSIGNKETVKLNQEM 550 Query: 412 NLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 LR+A+END+ V+HYQP+ + + + + EAL+R +P+ L PP +FI AEE+GLI+ Sbjct: 551 VLREAIENDRFVLHYQPQFSVKKQKMTGAEALIRLVTPDGQLRPPGEFIGVAEETGLIID 610 Query: 471 LGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVE 530 +G+W+I + +Q W DKG +L VA+NISARQ + + +K L + ++VE Sbjct: 611 IGKWIIDEACKQARIWHDKGYDLSVAINISARQFQSKDLIPLIKDTLNKYQLPPQLLEVE 670 Query: 531 LTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI 590 +TES ++N + V+ ++LG ++ +DDFGTG+SSLS L FPI +K+D+ F+ DI Sbjct: 671 VTESMTMDNLNHSKKVLSSLTELGIRISIDDFGTGHSSLSYLKDFPIHRLKIDKSFIDDI 730 Query: 591 HKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 P S+ + AI+A+ L+LQVIAEGVE+A + L + G + QGF F++P+P F Sbjct: 731 QTHPKSEQITGAIIAMGHQLSLQVIAEGVENAAQKQLLFEKGCDHLQGFFFSRPIPPEQF 790 Query: 651 ERW 653 E++ Sbjct: 791 EQF 793 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 191/557 (34%), Positives = 306/557 (54%), Gaps = 6/557 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L +V I I DSR + N TG + +++G++ L +AA Sbjct: 189 LGLYGKVFESTAEGIAITDSRMRFLQVNEAYCRITGYSDGELLGRTPRMLKSGHHDAAFY 248 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 ++ G+ + E+ T G+ + L + V + I TDI+ + Sbjct: 249 ADISKTLEVRGH-WRGEILDRTRDGRVIPLLQTISVVRDTQGAVSHYITIVTDISSIKET 307 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKV--GVVYLDLDNFKKVNDAYGHL 287 Q RL LA+ D +T LPNR ++HAI+ A N+ G++++DLD FK +ND+ GH Sbjct: 308 QSRLDFLAHHDPLTELPNRLLFTARLEHAIDWAVRNQAHFGLLFIDLDRFKTINDSLGHQ 367 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFR 346 GD+LL V+ + + +AR GGDEF+VL + E +A +++ +R PF Sbjct: 368 LGDRLLVQVARRLRGLVRKSDTIARLGGDEFVVLVEGIHNAGEAELLAEKLVHAMRQPFF 427 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 + E++ CS+GI L PE G D ++++AD AMY K+ GR FC F+ ++ + V E Sbjct: 428 LEETELHIGCSIGITLYPEDGEDPVTLLKNADAAMYRVKDFGRDGFCKFSQDLAEAVDER 487 Query: 407 LWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEES 465 L L+T LR+AL +QL +HYQP I +G + ++EAL RW+ ERG I P FI AEE+ Sbjct: 488 LALETALRQALRENQLQVHYQPVIDLAQGRMVAVEALARWRHAERGEIAPCSFIRLAEET 547 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEY 524 LI+PLG W+ + Q WR++G+ L V++N S +L D L + L E E Sbjct: 548 KLILPLGGWMARTAIGQFRLWRERGMELDYVSINTSGIELFDPGFVDGLFEALDEHGLEG 607 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 + +ELTE+ L+++ E V+ + Q G ++ +DDFGTGYSSL+ L + PID +K+D+ Sbjct: 608 RHLQIELTENVLMQDYEACRRVLLRLRQQGVRIAIDDFGTGYSSLAYLKQLPIDMLKIDR 667 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 F++D+ P ++V I+A+A L L +AEGVE+ +++ +L G QG+ +A+P Sbjct: 668 SFIKDVPGDPGDCAIVETIIAMAHRLGLATVAEGVETEEQEDYLLAIGCERLQGYRYARP 727 Query: 645 MPAVAFERWYKRYLKRA 661 + V+ ER + +++A Sbjct: 728 LDPVSLERLHADSVRQA 744 >UniRef50_C0ZBT6 Probable signaling protein YkoW n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT6_BREBN Length = 816 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 190/556 (34%), Positives = 318/556 (57%), Gaps = 43/556 (7%) Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM------------SRREAAASR 170 I+ LD+ G I + N GL+E + I Q V K+ M S ++ A Sbjct: 268 GIISLDTGGCIIKMNPAVTKIGGLREEEFINQHVSKIRMHIVEEQRELTKDSFAQSFAPN 327 Query: 171 RNN---RVFFRSGNAYEVE-LWIPT-CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 RNN +F +GN E+ L +P +G+ + N I + DITE Sbjct: 328 RNNFETTIFHPNGNRVELSVLNVPVEIEGEVV-------------GNHIIV----KDITE 370 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDA 283 E R +E++R LA D +T LPNR ++ +I + D++ V+ +D+D FK +ND+ Sbjct: 371 ENRVKEKIRYLAYHDELTDLPNRRKFNQVLHQSIEKSSQDSSSFAVMVIDIDRFKMINDS 430 Query: 284 YGHLFGDQLLRDVSLAI-LSCLEHDQVLARPGGDEFLVLASNTSQSALEA--MASRILTR 340 GH +GD L+ VS I S + +AR GGDEF +L T EA +A +I+ Sbjct: 431 LGHSYGDIFLQGVSDRISKSAKGYHATIARMGGDEFTILC-ETGADGREAASLADKIIEA 489 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 L+ PF + E Y S S+G A+ P+HG+D+ A+++ ADTAMY K+ G+ +T + + Sbjct: 490 LKQPFTLKDSEFYISASIGTAIFPDHGTDAVALLKKADTAMYEVKKQGKNGHLFYTTDFD 549 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFI 459 ++ E + ++ +LRKA+E +LV++YQP+ + + +EALVRW P +G++ P FI Sbjct: 550 AQLLENIEIERDLRKAIERKELVVYYQPQFHSESNRMIGVEALVRWNHPTKGMLSPGVFI 609 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQ 518 AEE+GLI +G WV+ + RQ+ +W DKG L V+VN+S+ Q + + +K +L+ Sbjct: 610 PIAEETGLIYEIGTWVLREACRQMKQWHDKGGPLIPVSVNLSSHQFHQRNLVQYIKNILE 669 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 E +++E+TES +++ +++S++ + +++G ++ LDDFGTGYSSLS L +FPI Sbjct: 670 ETKLAPHFLELEITESMMMD-PAVSISILHELNKIGTRISLDDFGTGYSSLSYLKKFPIH 728 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+D+ F+ D+ + +++V I+++A+ L L VIAEG+E+ + LT+N E QG Sbjct: 729 KLKIDRSFITDLSRNENDKAIVATIISMAKHLKLDVIAEGIETKDQLDILTENHCKEIQG 788 Query: 639 FLFAKPMPAVAFERWY 654 + +++P+ A E+ + Sbjct: 789 YYYSRPLSANEVEQSF 804 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 194/548 (35%), Positives = 296/548 (54%), Gaps = 11/548 (2%) Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 E+ + + D++G + R NR + TG +V+G + +L S R A R Sbjct: 622 ESQEGMTVTDAQGAVLRINRAFTEITGYSADEVVGHNP-RLLQSGRHDKAFYAAMWESIR 680 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 +++ E+W G+ + +G + + DIT + A++ +R LA Sbjct: 681 RTGSWQGEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFMDITRRKAAEDEIRNLAF 740 Query: 239 TDSITGLPNRNAMQDLIDHAIN-HADNNKVGVVYL-DLDNFKKVNDAYGHLFGDQLLRDV 296 D TGLPNR + D + A+ A + + G + L DLDNFK +ND GH GD LL+ V Sbjct: 741 FDLQTGLPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQV 800 Query: 297 SLAILSCLEHDQVLARPGGDEFLVLASNTSQ------SALEAMASRILTRLRLPFRIGLI 350 + + SC+ +AR GGDEF+V+ N S+ + E +A RIL L+ + + Sbjct: 801 AQRLASCVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETLAKRILASLKQTYSLDGY 860 Query: 351 EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLD 410 E ++ S+GI L E + +++ AD AMY AK GR F PEM V L+ Sbjct: 861 EYQSTASIGITLFSEQQETTEDLLKRADLAMYQAKAVGRNTLRFFDPEMQAVVTSRAALE 920 Query: 411 TNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 LR+A+ +D+ +++YQ ++ +G + EAL+RWQ PERGL+ P +FI+ AE++GLI+P Sbjct: 921 AGLRRAVTSDEFLLYYQAQVDGQGHLTGCEALLRWQHPERGLVAPGEFIALAEDTGLILP 980 Query: 471 LGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPID 528 LGRWV+ Q+A+W R + +L VAVN+S RQ + VL + Sbjct: 981 LGRWVLDAACTQLAQWATRPEMAHLTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLK 1040 Query: 529 VELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVR 588 +ELTES LI + E ++ + + G LDDFGTGYSSLS L R P+D +K+DQ FVR Sbjct: 1041 LELTESLLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVR 1100 Query: 589 DIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAV 648 +I P ++ R ++A+ +L L VIAEGVE + FL + G + QG+LF +P+P Sbjct: 1101 NILIDPNDAAIARMVIALGDSLGLAVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLD 1160 Query: 649 AFERWYKR 656 FE + +R Sbjct: 1161 QFEAFVRR 1168 >UniRef50_A6QA23 Putative uncharacterized protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA23_SULNB Length = 703 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 187/557 (33%), Positives = 321/557 (57%), Gaps = 17/557 (3%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 ++L S QV+ + H A+++LD G I+ +N+ E + +VIG++ LF Sbjct: 133 KELQLKYSQQAQVLEQIHDAVILLDMDGFIRSWNKGSEILFEYRADEVIGKNFSILFSDN 192 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF-LFRNKFVHSGSGKNEIFLICSGTD 222 +A + + + + Y+ E+++ G+ L+ +F + + +G+ ++ D Sbjct: 193 ITSAYEKWISEL--KENGEYKGEMFLQKKSGEPLYAVFSFSLLKNQNGET-TEVVSLIHD 249 Query: 223 ITEERRA----QER---LRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLD 273 ITE+++A QE+ LR A+ D++T LPNR D ++ +I + ++D Sbjct: 250 ITEQKKAEAVLQEQKNILRYQAHHDALTRLPNRVLFFDRLEQSIRKTARSEKDFALFFID 309 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEA 332 LD FK +ND+ GH GD++LR + I + + LAR GDEF V+ + Sbjct: 310 LDKFKHINDSLGHSIGDRVLRVTAKRIKETIRQEDTLARLSGDEFTVIMEDLGHPEDASV 369 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 +A +IL L+ P I +Y S S+GI+L P+ D+ +++++ADTAMY AKE GR F Sbjct: 370 LAEKILLVLQKPMYIDEYTLYISGSIGISLYPQDAMDTESLLKYADTAMYKAKENGRNTF 429 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERG 451 + PEM + E + + T+L++A+E ++L +HYQP+I R E + +EALVRWQ P RG Sbjct: 430 EFYAPEMTEYALERIAMKTSLKEAIEKEELCVHYQPQIDARAECIIGVEALVRWQHPTRG 489 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRV-AVNISARQLADQTIF 510 L+ P FIS AE++GLIV + +WV+ ++QV+ W +G+ V A+NIS +QL Sbjct: 490 LLHPEAFISLAEDTGLIVDIDKWVMRTAMKQVSTWHQEGLVSDVLALNISIKQLEGHNFM 549 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 + L + +F+ +++E+ E +++N + +++ S +G + +DDFGTGYSSLS Sbjct: 550 EEIAACLDDFDFKPKWLELEIPEGQVMKNHTETIERLKELSVMGIGISIDDFGTGYSSLS 609 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L R PI+ +K+D+ F+ I + ++V+AI+A+A +L L VIAEGVE+ + FL + Sbjct: 610 LLKRLPINRLKIDKSFIEFIPNEE-DVAIVKAIIALANSLKLDVIAEGVETDDQKDFLVE 668 Query: 631 NGINERQGFLFAKPMPA 647 NG + QG+ +++P+ + Sbjct: 669 NGCTKIQGYYYSRPIAS 685 >UniRef50_A1KCA9 GGDEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCA9_AZOSB Length = 689 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 177/434 (40%), Positives = 267/434 (61%), Gaps = 4/434 (0%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKK 279 D++E + A++R+R LA D +TGLPNR+ ++D + A D ++++DLD FK Sbjct: 242 DLSEIKAAEDRIRQLAYFDPLTGLPNRSLLEDRAGQVLVRAGRDRRAATLMFIDLDRFKT 301 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILT 339 VND+ GHL GDQLLR + + +AR GGDEF+VLA +T +A +IL Sbjct: 302 VNDSLGHLMGDQLLRLAGQRLRDSVRLSDTVARLGGDEFIVLAPDTGAEGAVRLAEKILE 361 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 PF + E+ S S+GIA P+ G D A+++ AD AMY AK GR F +F+ EM Sbjct: 362 VFAAPFDLDDRELTISPSIGIARYPDDGKDFPALLQSADIAMYQAKREGRNGFRMFSIEM 421 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDF 458 N + E L L+T LR+AL++ QL + YQP + G + EAL+RWQ P+ G I P+ F Sbjct: 422 NAPILESLLLETQLRRALDHGQLSLVYQPMVDIASGRIVGAEALLRWQHPQHGEISPVRF 481 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQVL 517 I AEESGLI+P+G WV+ + QV +WR G +L +AVN+SA Q I + ++L Sbjct: 482 IPVAEESGLILPIGEWVLEQALGQVQRWRAAGHPDLVMAVNLSALQFERLNISNTVLRLL 541 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 +++ELTES L+E+ E A++ + + G ++ +DDFGTGYSSL+ L R P+ Sbjct: 542 DHYGLPGSALELELTESVLMEDAERAVAAMLNLADRGVRLSVDDFGTGYSSLAYLTRLPL 601 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 +K+D+ FVR+I ++S+ R I+ +A++L L+VIAEGVE+ + L + ++ Q Sbjct: 602 AKLKIDRSFVRNIPSDASARSVARTILDLARSLALEVIAEGVENEAQLLLLREWCCDQAQ 661 Query: 638 GFLFAKPMPAVAFE 651 G+L+++P+PA AFE Sbjct: 662 GYLYSRPVPARAFE 675 >UniRef50_A6VW49 Diguanylate cyclase/phosphodiesterase n=2 Tax=Marinomonas RepID=A6VW49_MARMS Length = 659 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 173/451 (38%), Positives = 275/451 (60%), Gaps = 7/451 (1%) Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGV 269 N ++L+ DI EER + L L N D +T LPNRN + ++ A+ +A + + G+ Sbjct: 207 NVVYLLTH--DIQEERDHEVALYRLNNYDGLTHLPNRNLLYQQLESALVNARKRHRQFGL 264 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-S 328 +YLDLD FK +ND +GH GD+L++ V+ I + L R GGDEF+V+ NT++ Sbjct: 265 LYLDLDGFKVINDNFGHRVGDELIQRVAERIKGSIPSSACLYRLGGDEFVVVLENTNEIE 324 Query: 329 ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 LE++A I+ + + +E+ + S+GIA P+H D ++++AD AMY AK G Sbjct: 325 ELESIAQSIMQNASNTYPVAKMEMMITASIGIASYPQHADDVDNLLKNADAAMYRAKSTG 384 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQS 447 +CV+ M + +L L LRKA+E +Q ++HYQPKI E V EAL+RW Sbjct: 385 HNMYCVYEDHMADNINAHLTLGGGLRKAIEEEQFILHYQPKIRLPDEIVVGAEALIRWVH 444 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLAD 506 PE G+I P FI AEESGLI+PLG WVI RQ+ +WR+ G++ ++++VN+S+RQ Sbjct: 445 PELGMISPDQFIPLAEESGLILPLGEWVIRRACRQLQEWREAGLDPIKLSVNLSSRQFMQ 504 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 + +++ L+E + +++ELTES L+ + + ++ + F +LG + +DDFGTGY Sbjct: 505 ADLVDMVQRALEETGVDPEYLELELTESMLMADAQQSIEKLHSFRKLGLTLSIDDFGTGY 564 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSL+ L +FPI +K+D+ F+ D+ + ++V+A +A+A +LNL+VIAEGVE+ + Sbjct: 565 SSLAYLKKFPIQTLKIDRSFIHDLGLDCDNDAIVKATIAMANSLNLKVIAEGVENRSQVD 624 Query: 627 FLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 L E QG+LF+KP+ + F + K + Sbjct: 625 VLNGYDCQEVQGYLFSKPLSSDDFLMYLKAH 655 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 196/554 (35%), Positives = 296/554 (53%), Gaps = 10/554 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A V + AI+I D I N TG + +V+ ++ K S R Sbjct: 139 LRLAAHVFEYSGEAIMITDRDNQIVDVNAAFTTLTGYHKSEVLSKNP-KFLSSGRTTRKE 197 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 + R+G ++ E W G V + F + + D++ + Sbjct: 198 YQAMWAAIRTGGFWQGEFWDRRKDGSVFPKMMTVSVVLDRAGDIDFYLANFVDVSHYKET 257 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHL 287 + R+ LA+ D++TGLPNR +Q ++ +I A + ++ VV+LDLD FK +ND GH Sbjct: 258 ERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIAKRMSEQLAVVFLDLDRFKTINDTLGHP 317 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMASRILTRLRLPFR 346 GD LL V+ + + + ++AR GGDEF ++L + S A+A +I L PF+ Sbjct: 318 VGDDLLIQVADRLKTSVRQYDMVARLGGDEFVMILRGHDMPSVASAVAEKIRLHLNQPFQ 377 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY-TAKEGGRGQFCVFTPEMNQRVFE 405 IG + T+ S+GIAL P +G +++HADTAMY T EGG G FC F+ +MN E Sbjct: 378 IGQHTLRTATSIGIALYPGNGERMDDLMKHADTAMYFTKSEGGNG-FCFFSSDMNLHAHE 436 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 L L+ L ALEN Q ++YQP+++ +V E L+RW PE+G I P FI AE Sbjct: 437 KLELENLLHGALENQQFELYYQPQLSLPEQQVIGAEVLLRWHHPEKGFISPAVFIPLAEA 496 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFE 523 + I +G WV+ + RQ ++W G+ L R+ VN+S RQ D+ +FT +K+VL E Sbjct: 497 TNQIGAIGEWVLENACRQASQWLRDGLPLPRIGVNVSGRQFQDKNLFTLVKRVLAETGLP 556 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 +++E+TE+ + + + A ++Q + G V LDDFG GYSSL QL PID +K+D Sbjct: 557 ADRLELEITETAVTASPDEAARLLQSLRECGIMVALDDFGQGYSSLGQLRDLPIDRLKID 616 Query: 584 QVFVRDIHKQP--VSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 FVRDI +P ++ A + + L VIAEGVE+ + +FL +G +E QG+ F Sbjct: 617 AAFVRDITDEPGHPGGAIAAATIGLGHNLGFSVIAEGVETQAQLSFLMAHGCDEVQGYYF 676 Query: 642 AKPMPAVAFERWYK 655 AKPMP FE + + Sbjct: 677 AKPMPREQFEAFLR 690 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 191/558 (34%), Positives = 305/558 (54%), Gaps = 11/558 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A QV ++ I+I D++ I N C + TG + +V+G + +F + + Sbjct: 346 LRVAAQVYEQSREGILITDAQHRIVMLNSRCCELTGYTQGEVVGTTPEWMFSESQVSTPG 405 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFL--FRNKFVHSGSGKNEIFLICSGTDITEER 227 + EL + GQ LFL + V G+ + +C D+++ + Sbjct: 406 FVELCRHLDEQGGWAGELLLRQRNGQ-LFLAWLTLRTVRLGT---STYHVCMFGDLSDRQ 461 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYL---DLDNFKKVNDAY 284 A+ R++ LA D++TGLPNR + D + A+ + + + L D+D+FK +ND Sbjct: 462 AAERRIQYLAYFDTLTGLPNRALLTDRANMALRGVEGDAAPALALLLLDIDHFKHINDTL 521 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLP 344 GH GDQLL+ V+ + + + ++R GGDEF+VL + + S ++A IL RL Sbjct: 522 GHSTGDQLLQSVAKRLQATVREGDTVSRQGGDEFVVLLPDANASRAASVAQEILRRLGFV 581 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 RIG ++ S S+GIA++P+ G+D + + A+ AMY AK+ GR F PEM +R Sbjct: 582 CRIGEHDISVSVSIGIAMAPDDGTDFATLSKCAEIAMYRAKQEGRNTLRFFFPEMQERTL 641 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAE 463 ++ L LR A+E ++ +HYQP++ + GE+ +EAL+RW P G + P +FI AE Sbjct: 642 RHVQLTGALRGAVERGEMQLHYQPQVDLQTGELSGVEALLRWTHPLFGAVSPGEFIPLAE 701 Query: 464 ESGLIVPLGRWVILDVVRQVAKW-RDKGINLRVAVNISARQLADQTIFTALKQVLQELNF 522 ESGLI+P+G WV+ RQ+A W RD + +AVN+S Q + + +L E Sbjct: 702 ESGLIIPIGDWVLRTAARQLADWLRDGLPPMVMAVNLSVLQFNLPGLAQQIASILSEAGV 761 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +VELTES + E A++ I + +G QV LDDFGTGYSSL+ L RF +D +K+ Sbjct: 762 PPALFEVELTESMAMTEPEAAIATIDELHSVGVQVSLDDFGTGYSSLAYLKRFRLDRLKI 821 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 D FVRD P +++V AIV +A++L L +AEGVE++ + + G + QG+ + Sbjct: 822 DGSFVRDADSDPEDRAIVDAIVGMAESLGLATVAEGVETSGQLEVIRALGGDAVQGYWIS 881 Query: 643 KPMPAVAFERWYKRYLKR 660 +P+PA W + + +R Sbjct: 882 RPLPAAGLVAWLEGWQQR 899 >UniRef50_Q6LQD7 Putative uncharacterized protein n=3 Tax=Photobacterium RepID=Q6LQD7_PHOPR Length = 1053 Score = 323 bits (828), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 200/579 (34%), Positives = 314/579 (54%), Gaps = 41/579 (7%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 + + W + + LSH V ++ + ++I D G I+ N E +TG+ Sbjct: 480 DVTDWIERELKLKSLSHA-------VEQSDNTVLITDKNGIIEYVNHSFEAFTGITSAQA 532 Query: 152 IGQSVFKLFMS-----------RREAAASRRNNRVFFRSGN----AYEVELWIPTCKGQR 196 +G+ L R++ A R NRV R + YE E P Sbjct: 533 VGRDSRTLMKGSNETTSEIKHIRQQLKAGRTINRVITRKKSDNTVCYEDETISP------ 586 Query: 197 LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLID 256 + + +GK + I +G DITE + +L LA+ D +T LPNR + I+ Sbjct: 587 --------IRNDTGKISHY-ISTGKDITERVLFESKLHKLAHYDLLTELPNRLLLLQHIE 637 Query: 257 HAINHADNNKVGVVY--LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPG 314 AI +A+ K VV +DLD FKK+ND+ GH GD++L ++ I L + VLAR G Sbjct: 638 QAITNAEEMKTSVVVFNIDLDYFKKINDSLGHDVGDKVLITIAKRITRSLRDEDVLARLG 697 Query: 315 GDEFLVL-ASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAI 373 GDEF +L S+TS ++ +A RI+ + I + + S+GIA+ PE+ DS A+ Sbjct: 698 GDEFAILIQSDTSSQSIATLAERIINNICASLSIEEKSLSITASMGIAVYPENSVDSDAL 757 Query: 374 IRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR 433 ++++D A+Y AK+ GR ++C FTP+M + L L+++LRK+L DQ YQPK+ + Sbjct: 758 LKNSDIALYHAKDQGRNRYCFFTPQMGIESVQRLQLESDLRKSLGTDQYTFFYQPKVNAK 817 Query: 434 G-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN 492 +V +EAL+RW++ E + PL I E SGLIV +G +I Q+A W+ G++ Sbjct: 818 THKVCGIEALLRWKNEEGQIQSPLGIIPILENSGLIVNVGETLINQACEQLAIWQSNGLD 877 Query: 493 LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQ 552 L A+NISARQL I + + + +++E+TES ++ + +LA + + Sbjct: 878 LHFALNISARQLLHSDIVDTVYKAVTMSGCNPHYLELEITESVVMADVKLAFDKLIKLEA 937 Query: 553 LGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNL 612 LG ++ +DDFGTGYSSL+ L+RFPI +K+D+ FV+D+ S ++ R+I+ +A L + Sbjct: 938 LGVKIAIDDFGTGYSSLAYLSRFPIHILKVDREFVQDLPMNKDSVTITRSIIELAHNLGM 997 Query: 613 QVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 V+AEGVE+ + FLT G+ E QG+ F KPMP FE Sbjct: 998 LVVAEGVENEGQIKFLTGIGVEEFQGYYFGKPMPIDEFE 1036 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 207/563 (36%), Positives = 309/563 (54%), Gaps = 14/563 (2%) Query: 101 AVARDLSHGLSFAEQ-----VVSEAHS-AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 ++ RD++ F E+ VV +A S I+ D++G I N TG +VIG+ Sbjct: 460 SIVRDVTERKRFEERMRQAMVVFKASSQGIMTTDAQGVITSVNPAFCTITGYLAAEVIGR 519 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN-KFVHSGSGKNE 213 R EA SG+ + E+W G R + V G+ Sbjct: 520 KSSMFKPERHEATFFDAMWTSIVESGS-WAGEVWSRRSDGDRYPQWVTITAVRDTDGRIA 578 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVY 271 ++ +DITE ++ + + AN D +TGL NR+ +QD +D A+ HA + KVG+++ Sbjct: 579 EYVTLF-SDITERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHARRHGCKVGLLF 637 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-L 330 LDLD FK +ND+ GH GD+LL DV+ + SC+ + +AR GGDEF V+ + + A L Sbjct: 638 LDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVVVHDLADRADL 697 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 A+A +++ LR PF + + S SVGI + P+ G D ++R+AD AMY AK+ G+ Sbjct: 698 GAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIAMYKAKQAGKN 757 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPE 449 + + P M + L+ +LR A+E +HYQP + G + EAL+RW+ PE Sbjct: 758 RAQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGAEALIRWKHPE 817 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQT 508 RG+I PL+FI AEE GLIVP+G WV+ +VVRQ W +G LR+ +N+S Q + Sbjct: 818 RGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLNVSGVQFREAG 877 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + ++ +L E + E+TES L+ E + + + G LDDFGTG+SS Sbjct: 878 LPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFALDDFGTGFSS 937 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 LS L RFP+D +K+D+ FVRD +LV AI+ +A +L L+V AEGVESA++ FL Sbjct: 938 LSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEGVESAEQREFL 997 Query: 629 TKNGINERQGFLFAKPMPAVAFE 651 G + QG+L KP+ A AFE Sbjct: 998 RALGCDYLQGYLIGKPLAADAFE 1020 >UniRef50_A0YYE1 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensors n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YYE1_9CYAN Length = 1090 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 195/529 (36%), Positives = 306/529 (57%), Gaps = 15/529 (2%) Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV-ELWI 189 G + +N+ CE GL +V+G++V+ +F +A + ++ +G ++ E + Sbjct: 544 GRFRLWNKACEQLFGLSAVEVLGKTVYDVF-PPEQAEFFHQQDQAVLSAGKVLDIPEERV 602 Query: 190 PT-CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 T GQR+ L K + +L+C G DIT+ ++A+++LR A D++T LPNR Sbjct: 603 ETQTLGQRI-LHTVKVPLLNHYPDTEYLLCIGEDITKRKQAEDQLRHHAFYDTLTNLPNR 661 Query: 249 NAMQDLIDHAINHADNNK---VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLE 305 + + H+I V++LDLDNFK+VND+ GH GDQLL ++ + CL Sbjct: 662 ALFLNRLAHSIKQVQQTSGELFAVLFLDLDNFKRVNDSLGHQIGDQLLIAIARRLEGCLR 721 Query: 306 HDQVLARPGGDEFLVLAS--NTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 LAR GGDEF +L N A++ +A + +L LPF + EV+T+ S+GIALS Sbjct: 722 SRDTLARLGGDEFTILLEQINNITDAIK-VARHLHQQLMLPFNLSGNEVFTNVSIGIALS 780 Query: 364 -PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 H ++++AD+AMY AKE G+G + VF M+++ E L L++ LR+ALE ++ Sbjct: 781 CSRHEQHPEELLQNADSAMYRAKEMGKGAYAVFDTRMHRQAVERLQLESQLRRALELNEF 840 Query: 423 VIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 ++YQP ++ GEV EAL+RW +P +G I P FI AEE GLI +G+WV+ Sbjct: 841 QVYYQPIVSITTGEVIGFEALIRWLNPYKGFISPALFIPVAEEIGLISKIGQWVLYQACE 900 Query: 482 QVAKWRDKGI---NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 Q+ WR + NL V+VN+S++QL + + + QVL + +E+TES LIE Sbjct: 901 QLQVWRKQFPLFKNLTVSVNLSSQQLREPDLLEQIDQVLATTGLPSHCLKLEITESLLIE 960 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 N + AL +++Q Q+ LDDFGTGYSSLS L RFPI+ +K+D+ FV+ + + + + Sbjct: 961 NYDQALKILRQIQDRNIQLSLDDFGTGYSSLSYLHRFPINTLKIDRSFVKRLKQNHENTA 1020 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 +++AI+ +A AL + IAEG+E+ + L G QG LF+K + A Sbjct: 1021 IIKAILRLANALAMNTIAEGIETVFQLEKLKGLGCEYGQGHLFSKALDA 1069 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 189/548 (34%), Positives = 309/548 (56%), Gaps = 15/548 (2%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L+ A +V+ + I+I+DS I+ N TG ++IG++ + S Sbjct: 316 LNLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNP-NVLKSGHHDETF 374 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRL--FLFRNKFVHSGSGKNEIFLICSGTDITEER 227 ++ + + ++ E+W G+ +L N + I S DITE + Sbjct: 375 YKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFS--DITERK 432 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYG 285 + +ER++ LA D +T LPNR D + AI H ++ +++LDLD FK++ND+ G Sbjct: 433 KTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLG 492 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLP 344 H GDQ+L + + I C+ +AR GGDEF VL + +A R++ ++ P Sbjct: 493 HGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQP 552 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 F + E+Y + S+GIA+ PE G+ A+I++ADTAMY AK+ GR + ++T MN R F Sbjct: 553 FLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNARSF 612 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAE 463 E L ++++LR AL ++ + YQ K+ + G + +EALVRW PE GL+ P+DFI AE Sbjct: 613 ERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAE 672 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNF 522 G+I +G WV+ RQ W D G+ +R+AVN+SA+Q + + + + L+E Sbjct: 673 AMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDVPEVVARALRETGL 732 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +++ELTE+ L++ + ++V++ +G ++ +DDFGTGYSSLS L R PIDA+K+ Sbjct: 733 PPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKV 792 Query: 583 DQVFVRDIH--KQPVSQS---LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D+ FV DI + V++ +V I+ +A L L+ IAEGVE+ ++ FL G +E Q Sbjct: 793 DRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQ 852 Query: 638 GFLFAKPM 645 G+L ++P+ Sbjct: 853 GYLISRPV 860 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 187/582 (32%), Positives = 329/582 (56%), Gaps = 33/582 (5%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 R+ A A H+ + LS V+ + +I+I D G I+ N + TG Sbjct: 63 RQLAAKVKALHERDFKLKKLSSA-------VTNSGCSIIITDRLGRIEFVNNKFVNVTGY 115 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF-- 204 + + G+ F ++ ++ A + ++ +E ++ +G+ L R+ + Sbjct: 116 GQEEARGR--FLDILNPKDMDAEKPQEQI-------WESDILYDGWEGEVLSRRRDGYDF 166 Query: 205 -------VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDH 257 S + SG D++E + A +++ +A DS+TGL NR D ++ Sbjct: 167 WWAVTVSTVCDSDNTVTNYVISGVDVSELKEANRKMQQMALYDSLTGLANRRLFVDRLEQ 226 Query: 258 AINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGG 315 A+ A D ++ +++LDLD FK++ND GH GD LL+ V+ + +C+ +AR GG Sbjct: 227 AVKAASRDRKQIALLFLDLDQFKRINDTLGHDAGDSLLQTVAQRLKNCVRAKDTVARLGG 286 Query: 316 DEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAII 374 DEF VL ++ + ++ +A++IL L+ P ++ EV S S+G+ L+P G+++ ++ Sbjct: 287 DEFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEVIVSTSIGVTLAPTDGANADVLM 346 Query: 375 RHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR- 433 ++AD A+Y AKE GR ++ +T E+N + L ++ LR AL+ ++ + +QP++ Sbjct: 347 KNADLALYRAKEHGRDRYHFYTEELNAHALKQLLMEQELRHALQFEEFTLGFQPQVNLTT 406 Query: 434 GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGIN 492 G++ S+EAL+RW P +GL+ P FIS AEE+GLI P+GRWV+ + Q+ +D G Sbjct: 407 GKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACMQMKMLQDLTGSA 466 Query: 493 LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQ 552 +++AVN+SARQ D + ++++ L E E +++E+TES L+ + + + +++ Q Sbjct: 467 IKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVTNKLKRLRQ 526 Query: 553 LGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNL 612 G + +DDFG+GYSSLS L + P++A+K+D+ FVRDI + + AI+AVA L L Sbjct: 527 TGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQL 586 Query: 613 QVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 +V+AEGVE+A++ +L N + QG+ F+KP+ +FE Y Sbjct: 587 KVVAEGVETAEQKEYLLANQCDFAQGYFFSKPL---SFEDLY 625 >UniRef50_B2UGH6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=30 Tax=Burkholderiaceae RepID=B2UGH6_RALPJ Length = 917 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 192/503 (38%), Positives = 282/503 (56%), Gaps = 13/503 (2%) Query: 165 EAAASRRNNRVFFRSGNAY-EVELWIPTCKGQRLFLFRN--KFVHSGSGKNEIFLICSGT 221 E + R RV +G + + + G +++ N V G LI S Sbjct: 411 EIPVNERPTRVVLATGRPLLGLTVGLELVDGDVVWVHENVLPIVRPGDNTPSAVLI-SFN 469 Query: 222 DITEERRAQERLRILANTDSITGLPNR----NAMQDLIDHAINHA-DNNKVGVVYLDLDN 276 DI R AQ++L LA D++TGL NR MQ +++ A + A + ++V V++LDLD Sbjct: 470 DIGPARAAQQQLTFLAQRDALTGLYNRAYFSQRMQAVMEQAASQANEGHQVAVLFLDLDG 529 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMAS 335 FKKVND GH GD LLR V+ + +C+ LAR GGDEF+VL N S E +A Sbjct: 530 FKKVNDTAGHEAGDHLLRIVAQRLSACVRQSDTLARLGGDEFVVLLDNVRSLGEAERLAK 589 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 RI+ + PF E Y S+GIAL PEHG+D+ ++R AD AMY AK+ GR Q V+ Sbjct: 590 RIVHSIAQPFSTSGTEYYLGASIGIALYPEHGNDAATLLRCADAAMYNAKQNGRNQHRVY 649 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIP 454 T ++QR L+ +LR+AL +L + +QP + ++ E L+RW S E G + Sbjct: 650 TARLSQRAQRRFQLEYHLRRALTAGELSLRFQPIVDATSMDIVGAEVLLRWHSTELGEVS 709 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTAL 513 P +FI AE++GLI +G WV+ RQ A WR + VAVN+S RQ + + T + Sbjct: 710 PAEFIPVAEDAGLIGDIGEWVLAQACRQAAHWRATCMPEFFVAVNLSPRQFGEGLVPT-I 768 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 + L E +++E+TE L+ + + ++ + LG ++ +DDFGTGYSSLS L Sbjct: 769 SRCLTEAGLPASALEMEITEGLLMRDTAAVMPMLDALTALGIRISIDDFGTGYSSLSYLQ 828 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RFPID +K+D+ FV I + S + RA+VA+A +L++ V AEGVE+ ++ FL G Sbjct: 829 RFPIDNLKVDRSFVSGIPRHRDSVVISRAVVAMAASLDMTVTAEGVETLEQAEFLQAAGC 888 Query: 634 NERQGFLFAKPMPAVAFERWYKR 656 ++ QGFLF PM A A+E +R Sbjct: 889 DKLQGFLFGPPMTAAAYESRLRR 911 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 183/547 (33%), Positives = 300/547 (54%), Gaps = 22/547 (4%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 Q++ A+ A + +D+ G+I +N + E G E IG+S+ L M++ A + + Sbjct: 89 QIIDTANDAFITIDAEGSISDWNPMAEMIFGWPEDLAIGKSMMDLIMNQAPRNALIDDIQ 148 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT---------DITE 225 F +G+A P +GQ + ++ H + I G DI++ Sbjct: 149 EFINTGSA-------PFTQGQIVITALHRDGHEFPAEMSISPQAVGASFIFNIFVRDISQ 201 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDA 283 + +E+L LA D +TGL NR + L+ + A + + V++LDLD FK +ND+ Sbjct: 202 RKADEEKLETLATRDELTGLINRFSYNHLLKKEVALAKRHMESLAVLFLDLDGFKNINDS 261 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLR 342 GH GDQLLR+ + + +C+ +AR GGDEFL++ + RIL + Sbjct: 262 LGHDVGDQLLRETANRLSACIRESDTVARIGGDEFLIIMPGIKDVHDPRFLCERILNMIG 321 Query: 343 LPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQR 402 P+ IG E + S+GI+L P G + +++++ADTAMY AK+ GR + FTP M + Sbjct: 322 QPYLIGTQECFVGASIGISLYPLDGDNVESLVKNADTAMYQAKDSGRNAYKFFTPAMGEE 381 Query: 403 VFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISY 461 F+ + ++ LR A+E +Q + YQP++ G + +EAL+RW PE G I P FIS Sbjct: 382 AFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLRWTHPEWGPISPSVFISL 441 Query: 462 AEESGLIVPLGRWVILDVVRQVAKWR--DKGINLRVAVNISARQLADQTIFTALKQVLQE 519 E + LI+P+G WV+ + +Q W+ G LR+AVN +ARQ A + + + LQ+ Sbjct: 442 IENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQFAQADLVETVAKALQK 501 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 +++E+TE + + EL + +Q +LG + +DDFGTG+SSL+ L RFPID Sbjct: 502 SGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFGTGFSSLAYLKRFPIDI 561 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ F+ +I ++V I +A +L ++VIAEGVE+ + FL +G + QG+ Sbjct: 562 LKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKYQLEFLRGHGCDMIQGY 621 Query: 640 LFAKPMP 646 LF++P+P Sbjct: 622 LFSRPVP 628 >UniRef50_Q5P8Z7 Sensory box/GGDEF family protein n=3 Tax=cellular organisms RepID=Q5P8Z7_AZOSE Length = 1008 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 182/437 (41%), Positives = 267/437 (61%), Gaps = 5/437 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKK 279 DIT+ + AQ R+ LA+ D++TGLPNR +D A A+ + KV ++++DLD+FK Sbjct: 529 DITDRKEAQARIEYLAHHDALTGLPNRVLFRDRFALATAWAERAHAKVALLFVDLDHFKT 588 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRIL 338 +ND GH GD LL+ V+L + CL ++R GGDEFL+ ++ A+ + ++I Sbjct: 589 INDTLGHPVGDGLLQGVALRLRECLRETDTVSRLGGDEFLIALTDIRDPQAINSATAKIF 648 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L PF + E+ + S+GIA+ P+ G D ++++ADTAMY AK GR + +T + Sbjct: 649 DTLTRPFELEGHELTNTMSIGIAIWPDDGEDFDTLLKNADTAMYQAKRAGRNTWRFYTEQ 708 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLD 457 MN E L L T L ALEND+ ++HYQP+I G V +EAL+RW +R L+PP Sbjct: 709 MNANAVEQLQLRTALHSALENDEFLLHYQPQINLASGHVVGVEALLRWHWDKRELVPPDR 768 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQV 516 FI AEESGLIVP+G WV+ + Q +W +G+ L +AVN+SA Q + ++ + Sbjct: 769 FIPAAEESGLIVPIGDWVLREACMQAVRWTRQGLPELTIAVNLSAVQFRRGDLERSVVRA 828 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L + +++ELTES L+ + E + +++ LG ++ +DDFGTGYSSL+ L RF Sbjct: 829 LSLSGLDPARLELELTESLLLVDTESVIETLRRLKSLGVRLSIDDFGTGYSSLAYLKRFA 888 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 +D +K+DQ FVRDI P ++VRAIV++A L LQVIAEGVES D FL +E Sbjct: 889 VDKLKIDQSFVRDIATDPDDAAIVRAIVSMAHTLKLQVIAEGVESEDIDRFLHIFNCDEA 948 Query: 637 QGFLFAKPMPAVAFERW 653 QG+ +A+PMP A W Sbjct: 949 QGYHYARPMPGDALAEW 965 >UniRef50_Q1JW15 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JW15_DESAC Length = 893 Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 183/444 (41%), Positives = 283/444 (63%), Gaps = 6/444 (1%) Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLD 275 C D+T+ ++AQ+ + LA D++TGLPNR ++D + A+ A ++ VGV+ LDLD Sbjct: 444 CIINDVTDSKKAQQEIERLAYYDTLTGLPNRVLIKDRLQQAVAQAQRSRALVGVLALDLD 503 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMA 334 +FKK+ND+ G GDQ+L+ VS + L +AR GGDEF++L + SQ+ + A Sbjct: 504 HFKKINDSLGIGCGDQMLKLVSQRLKGHLRQGDSVARMGGDEFVILITGIKSQNDIVTAA 563 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 +IL L P I ++ ++ S+GI++ P + +++HADTAMY AKE GR + Sbjct: 564 GKILDLLAEPVTIDGHDLVSTGSLGISVYPTDADEVDLLLKHADTAMYQAKETGRNLYQF 623 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 ++P+MN+R FE L+LD++L +AL ++L +++QP+I +G V EAL+RW +G I Sbjct: 624 YSPDMNERAFERLFLDSDLHRALARNELELYFQPQIDLAQGHVVGAEALLRWNHATKGQI 683 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTA 512 P+ FI AEES LI+ +G WVI + R +W D+G +LRVAVN+SARQ + Sbjct: 684 SPVVFIPLAEESDLILDIGGWVIEEACRHARQWHDQGYTDLRVAVNLSARQFR-SDLPDI 742 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + +VL E +++ELTES L+E ELA +++ + LG + +DDFGTGYSSLS L Sbjct: 743 VARVLHETGLPAHLLELELTESLLMERPELARTILNKLRYLGNHLSIDDFGTGYSSLSYL 802 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 FPID +K+D+ FV+D++ P +V AI+A+A L L V+AEGVE++ + F+ + G Sbjct: 803 KHFPIDRLKIDRSFVKDLNVDPDDAIIVEAIIALAHGLRLNVVAEGVETSDQFEFMRQRG 862 Query: 633 INERQGFLFAKPMPAVAFERWYKR 656 +E QG++ A+PMPA F R+ ++ Sbjct: 863 CDEIQGYVVARPMPADDFLRYLQK 886 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 181/492 (36%), Positives = 279/492 (56%), Gaps = 11/492 (2%) Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + + G + EL G+ ++L + + S + DITE + A+ R+ Sbjct: 742 KALLKQGESVRTELVNYRKNGEEIWLEMDILPIANSAGVFTHWVSVQRDITERKAAESRI 801 Query: 234 RILANTDSITGLPNRNAMQDLIDHAI-NHADNNKVG-VVYLDLDNFKKVNDAYGHLFGDQ 291 + LA D +T LPNR + D ++ A+ N + G +++LDLDNFK +ND +GH FGD Sbjct: 802 QHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFKTLNDTHGHDFGDM 861 Query: 292 LLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA------MASRILTRLRLPF 345 LL V+ +L+ + +AR GGDEF+V+ N S+ A +A +IL L PF Sbjct: 862 LLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQGCNAAQEASLVADKILLALSQPF 921 Query: 346 RIGLIEVYTSCSVGIAL-SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 R+ E Y+SCS+G+AL E +++ AD AMY AK GR F F P M + Sbjct: 922 RLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAGRNTFRFFDPAMQALIT 981 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 + ++ +LR+AL D++ ++YQP++ +G + EALVRW+ P++GL+ P FI AEE Sbjct: 982 KRAAMEEDLRQALRRDEMRLYYQPQVDSQGSLLGAEALVRWEHPQQGLLSPAAFIELAEE 1041 Query: 465 SGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNF 522 +GLI+P+G WV+ Q+ W R + L ++VN+SARQL + +L+E Sbjct: 1042 TGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHDFIDRVFSILKETGA 1101 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 + +ELTES L+EN E ++ + +G +DDFGTGYSSL+ L R P+ +K+ Sbjct: 1102 NPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSLAYLKRLPLSQLKI 1161 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 D+ FVRD+ S+V+ I+A+ L ++V+AEGVES ++ FL K+G E QG+LF Sbjct: 1162 DRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEKHGCLEYQGYLFG 1221 Query: 643 KPMPAVAFERWY 654 +P PA ER + Sbjct: 1222 RPQPAEQLEREF 1233 >UniRef50_Q12L20 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=Q12L20_SHEDO Length = 1047 Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 194/576 (33%), Positives = 302/576 (52%), Gaps = 54/576 (9%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 LS A V + A+ + D +G I N + TG +VIGQ + L ++E A Sbjct: 481 LSIAASVYRNSSEAMCVFDYQGKIVNTNPAFSEITGFDADEVIGQHLAVL---QKEEQAE 537 Query: 170 RRN--------------NRVFFRSGNAYEVELWIP--------TCKGQRLFLFRNKFVHS 207 N + F+ N W+ TC + LF Sbjct: 538 HFNLQLEQYLFEKRYWQGELSFQRKNGQTYTAWVTINAIGELDTCDTLNVMLF------- 590 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNN 265 D++E+++A+E + + AN D++TGLPNR + + I I + DN Sbjct: 591 -------------ADVSEKKQAEELIWLQANYDTLTGLPNRRMLLEYIKLQIANCTRDNQ 637 Query: 266 KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASN 324 +++LDLD FK+VND+ GH GD LL + S I +C+ ++AR GGDEF +VL Sbjct: 638 GFALLFLDLDFFKEVNDSLGHDMGDSLLVEASQRIKACIRDADLVARIGGDEFTIVLTDF 697 Query: 325 TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 T +E + ++IL +L PF +G Y S S+GI L P+ ++++AD AMY+A Sbjct: 698 TGPKGVERVTNKILKQLSEPFMLGSEMAYISGSIGITLYPDDALTIDGLLKNADQAMYSA 757 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE----VRSLE 440 K GR +F FTP+M + + L +L+ A++ ++ ++YQP I + + E Sbjct: 758 KAHGRNKFNYFTPKMQETALRRMKLIQDLKTAIKMEEFELYYQPIIDFSANASDNITKAE 817 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNI 499 AL+RW P+ G I P+DFI AE++G+IV +G WV RQ A+W+ G+++++++N Sbjct: 818 ALIRWHHPKLGFISPVDFIPIAEDTGMIVEIGNWVFRQACRQAAQWKQTYGLDIQISINK 877 Query: 500 SARQLADQ-TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 S Q D+ + T+ Q + ELN I VE+TE L+E + + + F G Q+ Sbjct: 878 SPVQFRDERSSVTSWTQYMSELNLSPASICVEITEGLLLETESGVGAKLAAFRDAGMQIS 937 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 LDDFGTGYSSLS L +F ID +K+D+ FV ++ SL AI+ ++ L ++VIAEG Sbjct: 938 LDDFGTGYSSLSYLKKFDIDYLKIDKSFVSNLEDNTNDLSLCEAIIVMSHKLGIKVIAEG 997 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 +E+ + A L G + QG+LF+KP+ A FE Y Sbjct: 998 IETELQRAMLECAGCDYGQGYLFSKPVKAEDFESRY 1033 >UniRef50_B1XWM7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWM7_LEPCP Length = 751 Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 173/428 (40%), Positives = 264/428 (61%), Gaps = 5/428 (1%) Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDLDNFK 278 +D+TE RA ++L+ A D++TGLPNR + D + HA+ A V V+++DLD FK Sbjct: 280 SDVTEALRAADKLQHEATHDALTGLPNRALLSDRLQHAVLGAQAGQRSVAVLFIDLDRFK 339 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRI 337 ++ND+ GH GD +L++V+ + C LAR GGDEF+VL + S+ A+ A A+++ Sbjct: 340 RINDSLGHRHGDAVLKEVASRLQQCCRAHDTLARWGGDEFVVLLEDVPSRDAVAARAAQM 399 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 + + L F I +EV CS+GIA++P+ G A++ ADTAMY K G +F + Sbjct: 400 IDSVTLEFAIDQVEVACGCSIGIAMAPQDGVAVDALLAMADTAMYRGKSRGGKRFEFYAS 459 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPL 456 EM E+L L+T LR LE V+HYQP++ + G++ LEAL+RW+ P+ L P Sbjct: 460 EMPSWTREWLALETRLRHGLETQSFVLHYQPQVNLKTGQLVGLEALLRWRQPDGELWLPG 519 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQ 515 F+ EE+GLI+P+G WVI + +Q+A+WRD+G+ L V+VN+S RQ D+ + + + Sbjct: 520 RFLPVTEETGLILPIGEWVIREATQQLARWRDQGLPLVPVSVNVSTRQCLDRRLVQVVAE 579 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 L + + +E+TES + + ++ + LG QV +DDFGTG+SSLS L F Sbjct: 580 ALLCSGIDAGLLKLEVTESTAMADLGHLRGLLVELRALGVQVAMDDFGTGFSSLSHLKHF 639 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 ID IK+D FVRDI + ++VRA +A+A L L V+AEGVES ++ AFL+ + + Sbjct: 640 QIDQIKIDPSFVRDISRDANGAAIVRATIALAHGLGLPVVAEGVESEEQMAFLSAHHCDI 699 Query: 636 RQGFLFAK 643 QGFL+A+ Sbjct: 700 AQGFLYAR 707 >UniRef50_B8GQW3 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQW3_THISH Length = 926 Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 198/550 (36%), Positives = 309/550 (56%), Gaps = 14/550 (2%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 +V+ I D +G N E+ TG + +G+ V + + N+ Sbjct: 368 EVIEHVSEVIFRTDHQGRWTLLNPAWEELTGYSIAESLGRPVSEFVSAEDSPLLEALTNQ 427 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT--DITEERRAQER 232 + + + EL + T G+ ++ + FV S + GT DITE +RA+E Sbjct: 428 LLHGNKSQLRDELRLLTRAGEPRWV--SVFVRSSQDAEGRVIATFGTLTDITERKRAEEE 485 Query: 233 LRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGD 290 +R LA DS+T LPNR+ + D + A+ A ++ +++LDLDNFK +ND GH GD Sbjct: 486 IRRLAFYDSLTELPNRSLLYDRLRLAMASAARSRHHGAILFLDLDNFKDINDTLGHDVGD 545 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN----TSQSALEA--MASRILTRLRLP 344 +LLR V+ + + LAR GGDEF+++ ++ +Q+A+EA + S++L L P Sbjct: 546 ELLRQVASRMQGTIRETDTLARLGGDEFVIILNDLHPEQAQAAVEAETLGSKLLHLLAEP 605 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 FR+G E + + S+G L + + +++ AD AMY AK+ GR C F PEM+Q V Sbjct: 606 FRLGEHERHCTPSIGATLFGDGEVNVDELLKQADLAMYRAKDSGRNTLCFFEPEMHQVVK 665 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 L+ + RKAL DQL +HYQP + +G + EAL+RW PERG++PP++FI+ AE+ Sbjct: 666 ARAALEADFRKALREDQLHLHYQPHVDDQGHILGAEALLRWSHPERGMVPPMEFIAVAEQ 725 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGINLRV--AVNISARQLADQTIFTALKQVLQELNF 522 +GLI+ LGRWV+ +Q+A W + +R+ AVN+SA+Q + ++LQ Sbjct: 726 TGLIIKLGRWVLQTACQQLALWHRESQWMRINMAVNVSAKQFRHPDFVREVAEILQSTGA 785 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 + +ELTES L+E+ E ++ + +LG LDDFGTGYSSLS L R P+ +K+ Sbjct: 786 PAQHLVLELTESLLLEDTETVITRMNALRELGVGFALDDFGTGYSSLSYLKRLPLSLLKI 845 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 DQ FVRDI ++ I+ +A+ L L+VIAEGVE+ ++ FL + G ++ QG+LF Sbjct: 846 DQSFVRDILVDANDAAIAEMIITLAKTLGLEVIAEGVETPEQRDFLLEMGCHQFQGYLFG 905 Query: 643 KPMPAVAFER 652 +P P E+ Sbjct: 906 RPGPVDQLEK 915 >UniRef50_C9Y8E7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8E7_9BURK Length = 633 Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 172/431 (39%), Positives = 267/431 (61%), Gaps = 5/431 (1%) Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGH 286 +++ L LA D +T LPNR +L+ A+ A + N V ++++DLDNFK VND+ GH Sbjct: 190 SEKNLTYLAQHDGLTRLPNRILGNELLTEAMRVAAEEKNLVAMLFVDLDNFKDVNDSLGH 249 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV-LASNTSQSALEAMASRILTRLRLPF 345 GD L V+ + + ++ R GGDEFL+ L A+ ++ IL +++ PF Sbjct: 250 SAGDDFLVQVAQRLRESVRQSDIVCRQGGDEFLIGLTGLQHPDAVAKVSQDILQKMQAPF 309 Query: 346 RIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 ++ IEV SCS+GIAL P+HG+ ++RHAD AMY AKE GR F F+ ++ V E Sbjct: 310 QLRGIEVLASCSIGIALYPQHGNSFDELMRHADLAMYHAKEAGRNTFRFFSEDIRSSVTE 369 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 L L ++LR+A+ ++ V+HYQP G + EALVRWQ+P+ G++ P FI+ AE+ Sbjct: 370 SLHLISSLRQAVTQEEFVLHYQPVYDLHSGRLLGAEALVRWQNPKLGMVSPGLFITLAEK 429 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQVLQELNFE 523 SGLIV +G+WV+ + RQ+ WR +G +L V+VN+S Q + + + Q L+E + Sbjct: 430 SGLIVDIGQWVLTEACRQMQAWRQQGATDLFVSVNLSPVQFSRGNVEAVIAQALRETGLD 489 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 +++E+TES LI + E ++ + + G ++ +DDFGTGYS+LS L RFP+ +K+D Sbjct: 490 PRQLELEVTESTLIHDTEKFITTLGRIQHSGIRMSIDDFGTGYSNLSYLQRFPVHKLKID 549 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 Q FVR + + ++V AI+ +A++L L V AEGVE+ LT+ G ++ QG+LFA+ Sbjct: 550 QSFVRRLMQGQKDVAMVSAIIHLAKSLQLTVTAEGVENEATREALTRMGCDQAQGYLFAR 609 Query: 644 PMPAVAFERWY 654 PMPA FE ++ Sbjct: 610 PMPAKDFEAYW 620 >UniRef50_B7KTV8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Methylobacterium extorquens group RepID=B7KTV8_METC4 Length = 772 Score = 321 bits (823), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 178/433 (41%), Positives = 262/433 (60%), Gaps = 7/433 (1%) Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDN 276 +CS D+T + A+ R+ LA+ D++TGLPNR M + + A+ D + V+ LDLD Sbjct: 326 VCS--DVTATKDAELRIAHLAHHDALTGLPNRAFMSESLHQALRDPDRACLAVLSLDLDG 383 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL-ASNTSQSALEAMAS 335 FK VND YGH GD LL V+ + + + ++AR GGDEF+VL + TS S +E +A Sbjct: 384 FKAVNDRYGHPGGDALLTSVAERLQNEVSGGDIVARFGGDEFVVLNVAFTSPSEVEDLAR 443 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 R++ L P + V S+GIA +P G + ++++AD A+Y AK GRG F F Sbjct: 444 RLIESLSTPVPLDNESVTIGVSIGIAFAPTDGRTAEELLKNADAALYRAKTAGRGTFRFF 503 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIP 454 PEM++++ L +LR AL D+L + YQP + + G + EAL+RW+ PERG+I Sbjct: 504 EPEMDRKLQARQRLVQDLRNALTRDELRLDYQPFVKSETGVISGCEALLRWRHPERGMIS 563 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALK 514 P++FI AEESGLIVP+G WVI R+ A W R++VN+S Q + + + Sbjct: 564 PVEFIPLAEESGLIVPIGMWVIQQACREAASWPS---TYRISVNVSPVQFRSRDLPQVIL 620 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 L ++VE+TE+ LI++ + AL +++Q LG +V LDDFGTGYSSLS L R Sbjct: 621 AALTSSGLAPARLEVEVTEAVLIDDADTALEILRQIRSLGVRVALDDFGTGYSSLSYLRR 680 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 FP D IK+D+ FV+++ + SQ +V+AI +AQ L + V AEGVE+ + L + G Sbjct: 681 FPFDKIKIDRSFVQELDTRHDSQVIVQAIRDMAQGLGMTVTAEGVETDDQAKRLRQTGCE 740 Query: 635 ERQGFLFAKPMPA 647 E QGFL+++P PA Sbjct: 741 ELQGFLYSRPRPA 753 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 184/559 (32%), Positives = 309/559 (55%), Gaps = 37/559 (6%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAA-- 167 L +V + IVI D I N TG + +V+G++ L + E + Sbjct: 779 LRLNAKVFESSRDGIVITDKNNKIISVNNAFTTITGYEAKEVVGKNPHMLASEKLEESFY 838 Query: 168 --------------ASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 N R ++G Y L I T K G Sbjct: 839 SAMWDSIGVMGYWQGEVINQR---KNGEIYTQWLSISTIKDA-----------DGKISQH 884 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGV--VY 271 I +I +DI+E + A+ER++ L+N D +T LPN+N + D A+ A K V ++ Sbjct: 885 IGII---SDISERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLALATAKRLKTAVTLMF 941 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE 331 +DLD FK +N++ G GDQ++++++ ++ + + + R GGDEF++L NT Sbjct: 942 VDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGDEFILLLPNTDAEGAA 1001 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A ++L + PF ++ + S+GI+ P+ G + + AD A+Y AK GR Sbjct: 1002 HVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQSADAALYRAKYEGRNN 1061 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPER 450 F F +M+++ + L L++ LR A+E+++ +++YQP+ + ++ LEAL+RWQ PE+ Sbjct: 1062 FQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSKIIGLEALIRWQHPEK 1121 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTI 509 GL+ P FI AEESGLI +G WV+ V+Q+A W++ G+ + VAVN+S Q T+ Sbjct: 1122 GLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVPVAVNLSVVQFHQDTL 1181 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 + ++ Q+L++ + +++ELTE +E+ E L+V+ Q + LG ++ +DDFGTGYSSL Sbjct: 1182 YGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLGVRLSIDDFGTGYSSL 1241 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L +F ID +K+DQ FVR I P +++ AI+++A++L+ + IAEGVE+ ++ FL Sbjct: 1242 SYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKTIAEGVETLEQLNFLI 1301 Query: 630 KNGINERQGFLFAKPMPAV 648 N +E QG+ F+KP+P+ Sbjct: 1302 ANSCDEIQGYYFSKPLPST 1320 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 196/562 (34%), Positives = 308/562 (54%), Gaps = 48/562 (8%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ----------------SVFK 158 + + ++ ++VI D G I+ N TG +VI Q S++K Sbjct: 691 RAIEQSPVSVVITDPEGRIEYVNPKFTQLTGYTLEEVIAQNPRILKSGNLLPSVYDSLWK 750 Query: 159 LFMSRREAAASRRNNR----VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 S +E N R +F+ S + + F SG N Sbjct: 751 TITSGKEWYGELENKRKDGSIFWESASISPL------------------FDESGKIIN-- 790 Query: 215 FLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYL 272 I DIT+ + ++RL +A D +TGL NR + D ++ A++ + +K V V+ L Sbjct: 791 -FIGVKEDITQRKLNEKRLEYMATHDGLTGLANRTLLYDHLEIALHQSQRSKKLVAVILL 849 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALE 331 DLD FK +ND+ GHL GDQ+L+ V + + +AR GGDEF+VL ++ +A Sbjct: 850 DLDRFKVINDSLGHLVGDQVLKAVGQRLKQYVRSTDTVARLGGDEFVVLLTDVRDTTAAG 909 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A +L +L PF + E+Y S S GI LS D T ++R+AD AMY AK G G Sbjct: 910 KIAHNLLRKLNEPFFLHGRELYVSASFGICLSETDNVDGTILLRNADIAMYKAKAEGCGL 969 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPER 450 + ++ EMN+ + + L ++ +LR+ALE ++ ++YQPK+ G + EAL+RW+ P+R Sbjct: 970 Y-FYSHEMNEHLIKTLEMENSLRQALEKNEFQLYYQPKVEHATGRIIGCEALLRWRHPQR 1028 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLAD-QT 508 G+IPP +FI AEE+GLIV +G WV+ + RQ W +G+ L +AVNISARQ + Sbjct: 1029 GMIPPSEFIPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPPLTMAVNISARQFYQGEN 1088 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + A+K L+ +++ELTES ++++ A +++ QLG + LDDFGTGYSS Sbjct: 1089 LIQAVKSTLERSQLVPSQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGYSS 1148 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 L+ L FP+D++K+D+ F+ DI S +++ +I+A+A L LQ +AEGVE+ + A + Sbjct: 1149 LNYLRSFPVDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTVAEGVENNDQLALV 1208 Query: 629 TKNGINERQGFLFAKPMPAVAF 650 G N QG+LF++P+P F Sbjct: 1209 ANCGCNYIQGYLFSRPLPPEDF 1230 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 188/550 (34%), Positives = 303/550 (55%), Gaps = 10/550 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A++V I+I D+ G I+ N TG + +V+G++ ++ S ++ Sbjct: 281 LRLADKVFEATLEGIIITDAEGIIETVNPAFTRITGWRREEVVGKNP-RILSSSQQPPEF 339 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG--TDITEER 227 R+ R ++ E+ G+ F + + G + F +G +DIT+ + Sbjct: 340 YRHLWQSLREHGFWQGEVINRRKDGK--FYTEHLTITGIRGPDGTFTHYAGIFSDITQRK 397 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYG 285 +ERL LAN D +T LPNR + + + A+ H +V +++LDLD FK +ND G Sbjct: 398 LNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMFLDLDRFKFINDTLG 457 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMASRILTRLRLP 344 H GD+LL+ V+ + L +AR GGDEF +VL + A +++ R++ Sbjct: 458 HAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGVAQTAQKLIDRVQGM 517 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 + +VY + SVGIA+ P+ GS + +ADTAMY AKE G+ F FT +MN Sbjct: 518 VTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKNNFQFFTADMNASTL 577 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAE 463 L L++NL +AL + +H+QPK+ G + +EAL+RW+S E G + P DFI AE Sbjct: 578 ARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHELGPVSPADFIPIAE 637 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNF 522 ES LI +G WV+ RQ W + G+ VAVN+S++Q+ I ++++L+ N Sbjct: 638 ESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGDIVATVRRILEHSNL 697 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +++E+TES ++N + ++ LG ++ +DDFGTGYSSLS L + PID +K+ Sbjct: 698 PGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSSLSYLKQLPIDVLKI 757 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 D+ FV D+H+ ++ AI+++ Q+LNLQ +AEGVE + FL +G QG+LF+ Sbjct: 758 DRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFLLDHGCQYGQGYLFS 817 Query: 643 KPMPAVAFER 652 +P+PA E+ Sbjct: 818 RPVPAATMEQ 827 >UniRef50_B3E9L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L8_GEOLS Length = 631 Score = 321 bits (823), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 188/457 (41%), Positives = 275/457 (60%), Gaps = 9/457 (1%) Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD-- 263 H G+ + L TDITE R A E + LA DS+TGLPNR ++D + + A Sbjct: 165 HDGAISRVVLLY---TDITERRAAAEEIERLAFFDSLTGLPNRVLLKDRLAQLLTRAGRY 221 Query: 264 NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 N V ++++DLD FK+VND GH GDQLL+ VS + +CL +AR GGDEF+VL Sbjct: 222 NEMVAILFIDLDRFKEVNDTLGHGTGDQLLQVVSERLTACLRSCDTVARLGGDEFVVLLP 281 Query: 324 N-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 T + + +A+++L L P ++ EV+TS S+GI+L P G + + ++ADTAMY Sbjct: 282 GITERDCVGDIAAKLLQSLCKPVQLDAREVFTSGSIGISLWPIDGDSVSTLFKNADTAMY 341 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEA 441 AKE GR + +TP+M+ E L L +LR ALE +L + YQP++++ G + +EA Sbjct: 342 HAKEQGRNTYRFYTPQMHATSMEQLTLSNDLRYALERGELHLCYQPQVSFETGGLIGVEA 401 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNIS 500 L+RW P+ G+IPP FI AE++GLIVP+G WV+ + RQ W +G+ +LRVAVNIS Sbjct: 402 LLRWIHPKLGMIPPDRFIPLAEDTGLIVPIGTWVLHEACRQAMMWVAQGLPSLRVAVNIS 461 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 A+Q + +K VLQ +++ELTE LIEN +Q +G + +D Sbjct: 462 AKQFRESDFSDTVKAVLQTTGLAPNLLELELTEGMLIENVTQTKLTLQSLKDMGVTLAID 521 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDI-HKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DFGTGYSSLS L FP+D +K+D+ FV++I K + ++V A+VA+ +L L VIAEGV Sbjct: 522 DFGTGYSSLSYLKHFPLDRLKIDKSFVKEIAEKSGDAAAIVEAVVALGHSLKLTVIAEGV 581 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 E + FL +E QG+ F++P+ A E ++ Sbjct: 582 EQQDQVDFLHNRKCDELQGYFFSRPLTPQALEELLRK 618 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 321 bits (822), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 194/560 (34%), Positives = 315/560 (56%), Gaps = 25/560 (4%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 A++V S + I+ D + I N + TG + ++IGQ+VF L + Sbjct: 274 LAQKVYSHTPAGIIFTDDQHRILSINPATTEMTGYEPFELIGQTVFGLISLDEGISQKDF 333 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLF-----LFRNKFVHSGSGKNEIFLICSGTDITEE 226 ++ R + E+E+ T K F + R SG + ++++ DITE Sbjct: 334 QEQISMRGSWSSELEV---TQKNGSNFPAGARINRVDDPQSGLPAHYVWILA---DITER 387 Query: 227 RRAQERLRILANTDSITGLPNRNAM----QDLIDHAINHADNNKVGVVYLDLDNFKKVND 282 ++A++R+R +A D++TGLPNR A+ L+ A H V V+++DLD FK +ND Sbjct: 388 KQAEDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHG--WTVAVMFIDLDRFKIIND 445 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS-RILTRL 341 GH GD++LR+V+ + + L +AR GGDEF+++ + S A A+ S +I++ L Sbjct: 446 TLGHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSGKIISAL 505 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 E++TS S+GI++ P+ G D ++++ADTAMY AK GR + F +MN+ Sbjct: 506 STAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRNNYQFFAADMNR 565 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE---VRSLEALVRWQSPERGLIPPLDF 458 E L ++ LR A+ ++L + +QP+ +R E +EAL+RW P G+I P F Sbjct: 566 TAAERLNIERKLRHAIARNELSLVFQPQ--FRAEDTTPTGVEALLRWHHPTDGMISPARF 623 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVL 517 I AEE+G+IV +G WV+ ++A+W + G+ LR+AVN+SARQL + + L Sbjct: 624 IPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRDFCETVANAL 683 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 +++E+TES ++EN + A+ ++++ ++G + +DDFGTGYSSL+ L FPI Sbjct: 684 TTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKLFPI 743 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D +K+D+ FV DI +++ +A+A +L L VIAEGVE+ + L NG +E Q Sbjct: 744 DHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCDEVQ 803 Query: 638 GFLFAKPMP-AVAFERWYKR 656 GFLF+KP+ A AF + R Sbjct: 804 GFLFSKPLTGAAAFAFLHAR 823 >UniRef50_Q1K1R0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1R0_DESAC Length = 709 Score = 321 bits (822), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 172/454 (37%), Positives = 274/454 (60%), Gaps = 14/454 (3%) Query: 214 IFLICSGTDITEERRAQE-------RLRILANTDSITGLPNRNAMQDLI-DHAINHADNN 265 IFL C DI+E R +E +L + + D++TGLP R+ DL+ H + NN Sbjct: 249 IFLTCR--DISENMRQKEDIAYKEMQLEQILHYDTLTGLPQRDFFFDLLHSHMVGCQKNN 306 Query: 266 K-VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV-LAS 323 + + ++YLDLD FK +ND GH GDQ+L++V+ + + + L+R GDEFL+ L Sbjct: 307 RTLALLYLDLDRFKNINDTLGHTVGDQVLQEVAQRLQNNIRITDNLSRMSGDEFLITLDP 366 Query: 324 NTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 + S + +A + L+ + +P +I + + S+GI+L P + ++ AD+AMY Sbjct: 367 ADNLSEVTQLAQKFLSVISVPMKIEHHRFHLTASIGISLFPGDATSPEKLLSCADSAMYR 426 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEAL 442 AKE GR F + P MN++ LWL+T LR A+E +QL +HYQP+ G++ +EAL Sbjct: 427 AKESGRDAFRFYKPHMNEKAQGLLWLETELRLAIEQEQLELHYQPQYDLNTGQLVGMEAL 486 Query: 443 VRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISA 501 VRW PE+G+IPP +FI AEE+ LI+PLG WV+ RQ+A W GI+ +R+AVNISA Sbjct: 487 VRWNHPEKGMIPPGEFIPQAEETSLIIPLGEWVLNTACRQIAAWHAMGISPIRMAVNISA 546 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 Q + + ++L +++E+TES L+++ E A + + + +G Q+ +DD Sbjct: 547 VQFYRIDLAQMVAKLLDHYGLPATLLELEITESVLMDDVEAAAETMNKLTAMGIQLSIDD 606 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSLS L RFPI +K+D+ F+ D+ ++ +I+++A + ++V+AEGVE+ Sbjct: 607 FGTGYSSLSYLKRFPISTLKIDRSFINDVTINEQDAAIALSIISLAGHMGIEVLAEGVET 666 Query: 622 AKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 ++ +FL ++ QG+LF +P+PA ER K Sbjct: 667 VEQLSFLQRHACQYGQGYLFNRPLPAKDIERQLK 700 >UniRef50_B2UJ08 Diguanylate cyclase/phosphodiesterase n=5 Tax=Ralstonia RepID=B2UJ08_RALPJ Length = 670 Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 179/454 (39%), Positives = 271/454 (59%), Gaps = 27/454 (5%) Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAINHA-DNNKVGVVYLDLDNFKKVNDAYGH 286 +A+ L LA+ DS+T LPNR+A + + ++ A VG++ LDLDNFK VND GH Sbjct: 190 QAEAHLDYLAHIDSVTELPNRHAFNERLQVSLKRAGQTGAVGLLLLDLDNFKVVNDTLGH 249 Query: 287 LFGDQLLRDVSLAILSCLEHDQ---VLARPGGDEFLVLASNTSQSAL---------EAMA 334 GD+LLR V+ + +E VL R GGDEF V+A + ++ + + +A Sbjct: 250 NNGDRLLRQVARRLNDVIEQANLRAVLCRIGGDEFAVIAELSGRAQIAETEAATLADGLA 309 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 RIL L PF + L ++Y + SVG++L P D + R+ADTAMY AK G+ Sbjct: 310 KRILAALGAPFSLDLHQIYVTASVGVSLYPHDARDVQVLTRNADTAMYHAKNHGKNAAAS 369 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-----------RGEVRSLEALV 443 FT EM+Q+ L ++ +LR+AL+ ++L++ YQP++ R V +EALV Sbjct: 370 FTSEMDQQARRRLRVEADLRRALDREELLLAYQPQVRLSTDDAHDAVISRANVYGVEALV 429 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW-RDKGINLRVAVNISAR 502 RW+ PE GLI P +FI+ AEE+GLIVPLG WV+ +Q +W R+ G+ LRVAVN+SAR Sbjct: 430 RWRHPEIGLIGPGEFIAVAEETGLIVPLGLWVLRTACQQAVRWMREDGVTLRVAVNLSAR 489 Query: 503 QLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDF 562 Q D + + VL+E +++E+TES L+E+ E +++++ G + +DDF Sbjct: 490 QTRDPALVENVMDVLRETGMPPHQLELEITESVLMEDIEANIALLESLHAAGISLSIDDF 549 Query: 563 GTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESA 622 GTGYSSL+ L RFPI +K+D+ FV+ + +++ A++A+A +L +QV+AEGVE Sbjct: 550 GTGYSSLAYLQRFPIQKLKIDRSFVQRMPGD--GEAIAGAVIAMAHSLRMQVVAEGVEDP 607 Query: 623 KEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 ++ A L G + QG+LF++P A A W R Sbjct: 608 EQLALLRDAGCDLGQGYLFSRPQQADALMAWLNR 641 >UniRef50_A3IAQ2 Sensor histidine kinase; possible sporulation kinase n=2 Tax=Bacillaceae RepID=A3IAQ2_9BACI Length = 934 Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 189/549 (34%), Positives = 313/549 (57%), Gaps = 16/549 (2%) Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK-EHDVIGQSVFKLFMSRREAAASRRN 172 E +++ A I LD NI N G + + ++IGQSV ++ MS EA + Sbjct: 392 ELILNSAGEGIFGLDLDRNITFCNPAGALMLGYETDRELIGQSV-EIIMSGCEAEDNMTV 450 Query: 173 NRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS--GSGKNEIFLICSGTDITEERRAQ 230 + + N+YEV F ++V S G + + + DIT+ ++ + Sbjct: 451 SPFLNANFNSYEVFFRKDHSN------FPVEYVTSLIKEGDKVVGEVITFKDITQRKQLE 504 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLF 288 E+++ A DS+T LPNR + D + + +A N K+ V+YLDLD FK VND+ GH + Sbjct: 505 EKIKYHAYFDSLTDLPNRVLLIDRLTQGLKYAKVNGEKLAVLYLDLDRFKLVNDSLGHSY 564 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRI 347 GD LL+ V+ + +C+ D ++R GGDEF + N ++ + + + I PF + Sbjct: 565 GDLLLQSVAKRLSACVPEDATVSRQGGDEFTIYLPNIKCENDILKVINCINASFSQPFNL 624 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 E+Y S+GI+L P++G + +I++ADTAMY +KE + F+ M+ R FE + Sbjct: 625 IDNEIYIKTSIGISLFPKNGDTTETLIKNADTAMYKSKETPGTSYHFFSEGMDTRTFESI 684 Query: 408 WLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 L+ +L KALE D+L+I YQP+I ++ +++ +EAL+RW E G+I P FI AEE+G Sbjct: 685 KLENDLYKALERDELIIFYQPQINYKTNKIKGVEALLRWNHREHGMITPDRFIPLAEETG 744 Query: 467 LIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYC 525 LIVP+G WV+ + +Q+ +W ++G L ++VN+S Q +F+ ++ VL E + Sbjct: 745 LIVPIGEWVLKEACKQLKEWHNQGYPLISMSVNLSVHQFEQNNLFSIIENVLYETDLSPE 804 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 + +ELTE+ +++N E+ L + Q + LG + +DDFGTGYSSL L PI +K+D+ Sbjct: 805 YLQLELTENLIVKNTEVTLKTMTQLNGLGVNLAIDDFGTGYSSLGYLKNLPISTLKIDKS 864 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 FV+++ + ++ I+ +AQ L L+VIAEGVE+ ++ +L + + QG+ F+KPM Sbjct: 865 FVQEMLTDDAA-AITNTIITLAQNLKLEVIAEGVETKEQADYLLEQNCHLMQGYFFSKPM 923 Query: 646 PAVAFERWY 654 A + Y Sbjct: 924 KAGEIMKKY 932 >UniRef50_B6A0H8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Rhizobium RepID=B6A0H8_RHILW Length = 730 Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 182/530 (34%), Positives = 308/530 (58%), Gaps = 10/530 (1%) Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA- 182 I + D G N E TG+ E +V+G++ +LF R A +++++ ++G Sbjct: 179 IWVKDMNGVYLLCNHTFERLTGMAEAEVVGKTDLELFDIER-ARFFQQSDKAAIKAGECI 237 Query: 183 YEVELWIPTCK-GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 E W+ + + GQ + L K + + ++ D+TE +++++ +A D Sbjct: 238 LSDEEWVVSQENGQTILLETRKVPVIDAAGEVVGVLGVARDVTELNVSRQKIHQMAFYDP 297 Query: 242 ITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +T LPNR+ D + I A + + G++ +D+D+FK VND GH GD LL + Sbjct: 298 LTSLPNRSLFNDRLRQMITSAGSRGQRAGLMLIDIDHFKVVNDTMGHPVGDDLLCQAAAR 357 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSV 358 + + + +AR GGDEF +L + SQ L +A+ IL + R F + EV+ SCSV Sbjct: 358 LNASVRDHDTVARLGGDEFAILLPDISQGDDLGRIANNILDKFRERFLLDGQEVFVSCSV 417 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 GIAL P+ +D+ ++++AD+AMY AK GR F ++ ++ E + L+++LR+A+E Sbjct: 418 GIALYPDDSADANDLVKYADSAMYLAKRSGRNSFRFYSKDLTASAEERMRLESDLRRAIE 477 Query: 419 NDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 +L +HYQPK+ G + EAL+RW+ PE G+IPP+ FI AE++GLIV LGRWV+ Sbjct: 478 RGELELHYQPKVLLDSGAMVGCEALLRWRHPEMGMIPPVRFIPVAEDTGLIVELGRWVLH 537 Query: 478 DVVRQVAKWR-DKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 + + A+ D +VA+N+S +Q + ++ Q++ E +++E+TES L Sbjct: 538 EACQTAAELNADSRSPHKVAINLSVKQFQSAGLVKSIAQIIDETGCRAEWVEIEITESLL 597 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 ++ + L + + +G + +DDFGTGYS+L+ LARFPID +K+D+ F+ ++ + Sbjct: 598 LDQKDETLQALSELRSMGFSIAIDDFGTGYSALNYLARFPIDTLKIDRSFINSTDRR--N 655 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 + LV+AI+++A+ L V+AEGVE+A++ AFL NG QGFL++K +P Sbjct: 656 EELVKAILSIARCLGQSVVAEGVETAEQAAFLVANGCGTAQGFLYSKAVP 705 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 320 bits (821), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 190/550 (34%), Positives = 310/550 (56%), Gaps = 13/550 (2%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 QV ++ I I+D+ I N TG ++IG++ + + R + R Sbjct: 682 QVFQQSGEGITIMDANDIIVDVNSAFTQITGYSRDEIIGKNC-RFLEAERTDRSIDAQVR 740 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRN----KFVHSGSGKNEIFLICSGTDITEERRAQ 230 ++ E+W +G F F V +G + I S TDI+E + + Sbjct: 741 AALEQTGFWQGEVWDRHKEG---FDFPKWLMMSIVRDETGAISHY-IGSFTDISERKVNE 796 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLF 288 ER+ LA+ DS+T LPNR ++Q ++ A ++ V+++D+D+FK +ND GH Sbjct: 797 ERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHV 856 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIG 348 GD LL +V+ + + + +D ++AR GGDEF+V+ S+T + +A + + L + I Sbjct: 857 GDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSDTDHDRVAKVAEALRSGLNQTYLID 916 Query: 349 LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLW 408 +++S S+GI+L P G A++++AD AMY AK GR + FT MN V E Sbjct: 917 NKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQ 976 Query: 409 LDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGL 467 ++T LR+A+ ++L+++YQP++ G+V +EAL+RWQ PE GL+ P FI AEE + Sbjct: 977 IETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDM 1036 Query: 468 IVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCP 526 I+P+G+WV+ + + Q+A+WRDKG LR+AVN+SA QL TI + VL + Sbjct: 1037 IIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGA 1096 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 +++E+TES ++ E ++ + Q G ++ +DDFGTGYSSLS L P+D +KLD+ F Sbjct: 1097 LELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSF 1156 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 V+DI P ++ A +++A L L V+AEGVE+ + L+ G + QG+ F+KP+ Sbjct: 1157 VKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLA 1216 Query: 647 AVAFERWYKR 656 A R+ +R Sbjct: 1217 ADDCFRFIER 1226 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 320 bits (821), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 193/557 (34%), Positives = 308/557 (55%), Gaps = 18/557 (3%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L V S ++ AI++ D+ I N TG + DVIG++ L Sbjct: 347 LQLMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGKNPRILSAGTTPTEVF 406 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQ------RLFLFRNKFVHSGSGKNEIFLICSGTDI 223 R G A++ ELW G+ + L R++ G +N I S DI Sbjct: 407 SDMWTCLHREG-AWQGELWDRKKNGEAYPKWLSISLVRDE---DGQIRNHI---GSFIDI 459 Query: 224 TEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKV--GVVYLDLDNFKKVN 281 +E + QER+R LA+ D++T L NR ++ + + A+ N++ ++ +DLD FK +N Sbjct: 460 SELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLDRFKTIN 519 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTR 340 D GH GD+LL V+ + + ++AR GGDEF++ A A +A I Sbjct: 520 DTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLADDITRE 579 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 + P+ I E+ TS S+GI + P GS+ ++++AD AMY AK GRG + FT +MN Sbjct: 580 ISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQFFTEDMN 639 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFI 459 E + L+++LR A+ + ++HYQP++ R G + +EAL+RWQ P RGL+ P DFI Sbjct: 640 IATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLVSPADFI 699 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQ 518 AEESG+I +G WV+ + RQ+ W+++GI +LR+++N+SA Q D+T+ + ++L Sbjct: 700 PIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPARIHELLA 759 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 + +D+E+TES + + + ++SV++ S G + +DDFGTGYSSL+ L PI Sbjct: 760 ANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYLKLLPIH 819 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+D+ FV+DI P + V +A L L+V+AEGVE+ + FL G + QG Sbjct: 820 TLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIGCEKVQG 879 Query: 639 FLFAKPMPAVAFERWYK 655 +L +KP+PA ER+ + Sbjct: 880 YLISKPLPADQAERFIR 896 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 189/550 (34%), Positives = 303/550 (55%), Gaps = 13/550 (2%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 A VV +V+ D+ I N G E +++G++ ++F S R A Sbjct: 337 LASTVVDNTIEGVVVTDAHSRILSVNHAFTKLLGFSEAEMLGKTP-RMFKSGRHDKAFYD 395 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI-FLICSGTDITEERRAQ 230 + ++ E+W G+ +F R +++ +C TDI+ E+ + Sbjct: 396 AMWASMHATGHWQGEIWNRRKNGE-VFPERMSLSAVKDANDKVTHYVCMFTDISAEKARE 454 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDLDNFKKVNDAYGHLF 288 ++L LA+ D++TGLPNR+ ++ A+ + + N ++ V+ ++D FK VND+YGH Sbjct: 455 QQLEFLAHRDTLTGLPNRSQFTRMLGEAVELSQSTNRRMAVLLFNIDRFKDVNDSYGHSI 514 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS--QSALEAMASRILTRLRLPFR 346 GD++LR VS+ + L H ++ R GDE V+A + SA++ +A R++ P+ Sbjct: 515 GDEVLRHVSVQMQGALRHGDIIGRLAGDEICVVAQSICGRDSAVD-VAERLMAAAGQPWT 573 Query: 347 I--GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 GL V S S GI L P+H + +++ A A+Y AK G +C F M Q Sbjct: 574 TPDGL-SVVVSVSAGICLYPDHALTADDLLQGAHAAVYGAKARGSNAWCFFHENMTQAAR 632 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAE 463 E L L+ LR+ALE + ++YQP+I G + EAL+RW PE GLI P FI AE Sbjct: 633 ERLALEARLRRALELGHMRLYYQPQIELATGRLVGAEALLRWLDPEEGLISPARFIPVAE 692 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNF 522 SG+I PLG WV+ + RQ +WR G+ +L +AVN+S Q I A + L + F Sbjct: 693 NSGVIGPLGLWVLGEACRQGQQWRAAGLPDLAIAVNVSLHQFLLTDIAGATAEALNKSGF 752 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +++E+TES L E E AL+V+ + +LG ++ +DDFGTGYSSL+ L RFP+D +K+ Sbjct: 753 PASLLELEITESALAEKPEEALAVLNRLRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKI 812 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 DQ F+RDI ++ +++A+ A+ L+V+AEGVE+ ++ +FL + G + QG+ + Sbjct: 813 DQGFIRDIPHSADDMTISSSVIALGHAMGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCS 872 Query: 643 KPMPAVAFER 652 +P+PA F R Sbjct: 873 RPLPAEDFTR 882 >UniRef50_A1AMG1 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AMG1_PELPD Length = 718 Score = 320 bits (821), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 179/449 (39%), Positives = 269/449 (59%), Gaps = 19/449 (4%) Query: 217 ICSGT--DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYL 272 + SGT DIT + A+E++R LA DS+TGLPNR ++ + A+ ++ +K + ++ L Sbjct: 245 LVSGTIQDITSRKLAEEKIRYLAYYDSLTGLPNRVLFKEHLRRALATSEQHKRQLAIMLL 304 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDV------------SLAILSCLEHDQVLARPGGDEFLV 320 DLD FK +ND+ GH GD LL+ V +++ S + D ++AR GGDEF + Sbjct: 305 DLDRFKGINDSLGHDAGDLLLQQVADRLRLRVRPYDTVSRDSEEQRDSLIARLGGDEFTI 364 Query: 321 LASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADT 379 L T+ A +A R++ L PF + EV+ SCS+GI++ P G+D ++++AD Sbjct: 365 LLEGITTPEAAARVARRVIEALEAPFALNGNEVFISCSIGISIYPHDGTDLEILVKNADV 424 Query: 380 AMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRS 438 AMY AK+ G F +T EMN + L L+T+LRKA E ++ +HYQP+I + Sbjct: 425 AMYCAKDLGCSTFQFYTQEMNSVSLQRLILETHLRKAFEKEEFFLHYQPQIDCVTNRIIG 484 Query: 439 LEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAV 497 LEAL RW +PE GL+ P FI AEE+GLI+ L RWV+ V +Q+ W+ GI L RVAV Sbjct: 485 LEALARWNNPELGLVSPGSFIPLAEETGLIIALDRWVLATVCKQLEAWQAAGIPLVRVAV 544 Query: 498 NISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQV 557 N+SAR + ++Q+ +D+E+TE L+EN E +SV+ + G + Sbjct: 545 NLSARHFLKANLNKTIQQIRSRGAAARDHLDLEITEGMLMENAEEVVSVLGMLQETGVNI 604 Query: 558 HLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAE 617 +DDFGTGYSSLS L R P +K+D+ F+ S S+V AI+A+A +L +V+AE Sbjct: 605 SIDDFGTGYSSLSYLTRLPFHTLKIDRSFISQSGDNVESASVVTAIIALAHSLGKEVVAE 664 Query: 618 GVESAKEDAFLTKNGINERQGFLFAKPMP 646 GVE++ + FL +NG QG+LF++P+P Sbjct: 665 GVETSTQLQFLKENGCRVIQGYLFSRPLP 693 >UniRef50_Q1GYK0 Diguanylate cyclase/phosphodiesterase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GYK0_METFK Length = 617 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 170/452 (37%), Positives = 273/452 (60%), Gaps = 7/452 (1%) Query: 217 ICSGTDITEE--RRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYL 272 + +G D+ +E +R Q L LA+ D +T LPNR D + + A N +VG++++ Sbjct: 158 LANGHDLLDEITQRKQANLFYLAHFDQLTKLPNRVLFMDRLAMTLAEASRTNAQVGLLFI 217 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALE 331 DLD FK ND+ GH FGDQLL ++ + C +AR GDEF ++ + S Q L+ Sbjct: 218 DLDKFKHFNDSMGHAFGDQLLIALAGILARCSREMDTVARLSGDEFTIIVDSISGQKDLD 277 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 + RIL L+LP +I E++ S S+G A+ P D+ ++ AD AMY AK GR Sbjct: 278 ILCWRILDALKLPQQIMGREIFISASIGTAIYPLDDEDANNLMIKADAAMYEAKRNGRNT 337 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPER 450 + + M + + L+T+LR A+E ++ ++YQP+I G+V EAL+RW P+R Sbjct: 338 YRHYAAGMQLYSLDRMSLETDLRLAIERNEFELYYQPQIALDSGQVVGKEALIRWHHPQR 397 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTI 509 GL+ P+ FI AEE+GLIV +G+WVI + RQ W +G +R++VNISA Q Sbjct: 398 GLLTPIHFIEIAEETGLIVAIGQWVISEACRQHQAWLQEGFQPMRISVNISAMQFYQSDF 457 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 ++ +L+E ++ ELTES +++ + + + Q S+LG ++ +DDFGTGYS+L Sbjct: 458 CDMVEHILKETRINPAYLEFELTESMFMQDADAVVRTLHQLSRLGIKLAIDDFGTGYSNL 517 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L +FPID +K+DQ F++ I ++P++ +V+ IVA+A++++L+++AEGVE+ E + Sbjct: 518 SYLRKFPIDRLKVDQSFIKGIEREPINVEIVKTIVALARSMSLELVAEGVETDVELHWAE 577 Query: 630 KNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 +G QG+ F++P+PA F RW + Y +A Sbjct: 578 SSGCTFVQGYRFSQPLPAEKFTRWVREYKYQA 609 >UniRef50_Q47C60 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodocyclaceae RepID=Q47C60_DECAR Length = 714 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 181/484 (37%), Positives = 280/484 (57%), Gaps = 8/484 (1%) Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT--DITEERRAQERLRI 235 R G E I G R+++ + H+ + FL GT DITE R Q L+ Sbjct: 229 RDGRVTNFESEITCRDGSRIWI--AEHAHAVRSADGSFLYYEGTVEDITERHRYQSVLQH 286 Query: 236 LANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLL 293 A D +TGLPNRN ++D + A+ A ++KV + ++DLDNFK +ND+ GH GDQLL Sbjct: 287 QATHDPLTGLPNRNLLEDRLAQAVQLARRKSSKVALAFVDLDNFKVINDSLGHAAGDQLL 346 Query: 294 RDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMASRILTRLRLPFRIGLIEV 352 ++S + + L +AR GGDEF L+L TS + + R+L ++ P + + Sbjct: 347 IEISSRLRAALRGLDTVARYGGDEFVLILGEQTSMADTMHLLERVLVSIQAPLALEGHGL 406 Query: 353 YTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTN 412 +CS+G+++ P+ D ++R AD AMY AKE G+GQ+C +T ++NQ + L+T Sbjct: 407 RINCSIGVSVFPDDAQDLDGLLRVADVAMYHAKESGKGQYCFYTRDLNQAAQDRFSLETA 466 Query: 413 LRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLG 472 L A+EN++L + YQPK+ G VR EALVRW S RGL+ P FI AEE+G I+ +G Sbjct: 467 LGSAIENNELTVVYQPKVDGEGMVRGFEALVRWNSAGRGLVTPDRFIPLAEETGQILAIG 526 Query: 473 RWVILDVVRQVAKWR-DKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVEL 531 V+ R A W G L VAVN+SARQL + + + L +++E+ Sbjct: 527 EQVLYAACRTAANWPLIDGQALSVAVNLSARQLREPGLPGLVADALAVSGLPPECLELEV 586 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TES ++ + E + V++ LG ++ +DDFGTGYSSL+ L R PID +K+D+ FV + Sbjct: 587 TESMIMGDMEHNIRVLKSIKALGVRIAVDDFGTGYSSLAYLQRLPIDTLKIDRSFVSGCN 646 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 + + ++ AI+ + + L+L ++AEGVE+ +E A L G NE QG+LF++P+ + A + Sbjct: 647 RGGKAMAIPHAIIFLGKTLDLHIVAEGVETDEERAILAVCGCNEFQGYLFSRPLQSAAVD 706 Query: 652 RWYK 655 + + Sbjct: 707 TYLQ 710 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 194/546 (35%), Positives = 297/546 (54%), Gaps = 14/546 (2%) Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 E+ + ++I D+ IQR NR + TG + +GQ+ L R A R R Sbjct: 280 ESQTCMIITDANRVIQRVNRAFIETTGYSAEEAVGQTPRLLQSGRHGADFYREMWETIHR 339 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 +G A++ E+W G+ + + G+ I + DITE ++A+ER+ LA Sbjct: 340 TG-AWQGEIWGRRKNGEVYPKWLSISAVVGTNGRVSHYIGTHNDITERKKAEERINALAF 398 Query: 239 TDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDV 296 D +TGLPNR + D + I + ++ ++++DLDNFK +ND GH GDQLL+ V Sbjct: 399 FDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFIDLDNFKTLNDTLGHDVGDQLLKQV 458 Query: 297 SLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA------MASRILTRLRLPFRIGLI 350 +L + C+ +AR GGDEF+V+ +N + + EA +A +IL L +++G + Sbjct: 459 ALRLTHCVRDGDTVARLGGDEFVVVLANLNTNDKEAAQDTETVAEKILATLNQTYQLGHV 518 Query: 351 EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLD 410 ++S S+G L +++ AD +MY AK GR F P M V ++ Sbjct: 519 THHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRNAVRFFDPSMEIAVKVRAEME 578 Query: 411 TNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIV 469 +L +AL Q ++HYQ ++ GE + E L+RWQ P+RG++ P +FI AEE+GLI+ Sbjct: 579 DDLLRALAEKQFLLHYQAQMV--GERLTGAEVLLRWQHPQRGMVSPAEFIPLAEETGLIL 636 Query: 470 PLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPI 527 PLG WV+ Q+A+W R + +L +AVN+SA Q + VL++ + Sbjct: 637 PLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQVLGVLEKTGANPQRL 696 Query: 528 DVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFV 587 +ELTES L+EN E + + G LDDFGTGYSSLS L R P+D +K+DQ FV Sbjct: 697 KLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLSYLKRLPLDHLKIDQSFV 756 Query: 588 RDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 RD+ S+ R IVA+A +L L VIAEGVE+ + FL +G + QG+ F++P+P Sbjct: 757 RDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFLASSGCHTYQGYYFSRPLPI 816 Query: 648 VAFERW 653 FE + Sbjct: 817 EDFESF 822 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 320 bits (820), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 196/566 (34%), Positives = 311/566 (54%), Gaps = 29/566 (5%) Query: 105 DLSHGLSFAEQ------VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 D++ G + AE+ + ++I D G I N + TG + IG++ Sbjct: 269 DVTAGHALAERQRLHATALESTRDGVLIADLTGRIISVNPAFSEMTGYTAAEAIGRNPRL 328 Query: 159 LFMSRREAAASRRNNRVFFRS-------GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 L S R++R F+++ ++ ELW G+ + V Sbjct: 329 L--------QSGRHDRAFYQAMWASLTQAGHWQGELWNRRADGEIYPQWATLSVVKDEHG 380 Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGV 269 + TD+++ + +E L LA+ D +T LPNR ++ L+ HA+ A K V Sbjct: 381 QPTHYLAVFTDLSKLKHREEELEHLAHYDPLTDLPNRLLLRSLLQHALERAQRQGGKSAV 440 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL--ASNTSQ 327 + ++LD FK VND+ GH GD+LL V+ + + L H+ V+ R G DEF+ + AS ++ Sbjct: 441 LVINLDQFKNVNDSLGHALGDELLLGVTARLKARLRHEDVVGRLGADEFVAILEASQDAE 500 Query: 328 SALEAMASRILTRLRLPFRIG-LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKE 386 +A ++A +L L PF + E Y S+GI++ P+ G + ++R AD AM+ AK+ Sbjct: 501 NA-GSIAGDLLAALAPPFVLADGHETYARASIGISVFPQDGKGANDLLRSADVAMHRAKQ 559 Query: 387 GGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRW 445 G Q+ +T E+ + L ++T LR+AL +LV+HYQPK+ G + EAL+RW Sbjct: 560 RGGNQYAFYTGELGHGALQRLEMETALRRALIQGELVLHYQPKLDLASGVIVGGEALLRW 619 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQL 504 Q P GL+PP FI AEE+GLIVP+G WVI + RQ+ W + G ++ VAVN+SARQ Sbjct: 620 QRPGFGLVPPYRFIPLAEETGLIVPIGAWVINETCRQIRAWAEAGQPSVMVAVNVSARQF 679 Query: 505 ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGT 564 A + L L++ + + +ELTES L+ E A + ++G V LDDFGT Sbjct: 680 AGGELEAVLATALRKHAVDPRMLGLELTESMLMAAPEQATERLDALRRVGVAVALDDFGT 739 Query: 565 GYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE 624 GYSSLS L+RFP+D +K+D+ F+ I P + ++ A++A+A + L+V+AEGVE+ + Sbjct: 740 GYSSLSYLSRFPVDELKIDRSFITHIVSDPKAANIATAVIALAHRMALKVVAEGVETETQ 799 Query: 625 DAFLTKNGINERQGFLFAKPMPAVAF 650 ++L KN ++ QG+LF+ P+PA F Sbjct: 800 LSYLRKNRCDQIQGYLFSAPVPADEF 825 >UniRef50_Q39XT2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39XT2_GEOMG Length = 820 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 205/550 (37%), Positives = 300/550 (54%), Gaps = 8/550 (1%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 +F + V+ A+VIL + I N G E++++G ++ A R Sbjct: 272 NFLDNVIQSMADALVILSTDWTIISVNPALCTILGYGENELLGSPFGRIVAG---GAEER 328 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 R G E EL G + + + V + ++C DI+E +R++ Sbjct: 329 ELLREMAERGQVPERELIYLARDGAAIPVSVSGAVMRSPTGEVVGIVCIAHDISERKRSE 388 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDLDNFKKVNDAYGHLF 288 E +R LA D +T LPNR+ QD + AI + D + + +++LDLD FK +ND GH + Sbjct: 389 EEIRRLAFYDPLTRLPNRSLFQDKLAQAIRRSRTDGDMIALLFLDLDRFKDINDTLGHAY 448 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRI 347 GDQLL V+ + L + LAR GGDEF+ L + + ++ ++A IL L PF I Sbjct: 449 GDQLLLAVAARLGDNLRPTEFLARLGGDEFVFLVTGLRDKRSVGSLAHSILELLNTPFEI 508 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 E++ S S+GIALSP G D ++ HAD A+Y AKE GR F F+ E+N+ E Sbjct: 509 DDKELFISTSIGIALSPGDGDDGDTLLTHADMALYAAKEQGRNAFSFFSEELNREARERR 568 Query: 408 WLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 L+ +L +A ND+ + YQP+I R G + S EALVRWQ PE GLI P FI AEE+G Sbjct: 569 HLEGSLHRAFANDEFFLEYQPQIELRSGRIFSFEALVRWQHPEDGLIYPNRFIPVAEETG 628 Query: 467 LIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 LI LG WV+ Q +W+ G+ +RVAVN+S Q + +VL+E + Sbjct: 629 LIRRLGEWVLRTACLQCRQWQQPGLPPVRVAVNVSGHQFNQPGFIDMVDRVLEETELDPE 688 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 +++ELTES L+ + ++ + G + +DDFGTGYSSLS L FP+D +K+D+ Sbjct: 689 LLELELTESSLMAGAQESIMTLIDLKVRGIHLAIDDFGTGYSSLSYLKHFPLDRLKIDRS 748 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 FVRDI K +++V AI+A+A +L L+V+AEGVE E L + G +E QGF FA P+ Sbjct: 749 FVRDIVKDLDDRAIVEAIIAMAHSLGLRVLAEGVEHEDELELLKERGCDEVQGFYFAHPL 808 Query: 646 PAVAFERWYK 655 A E K Sbjct: 809 LPAAVEENLK 818 >UniRef50_A0YLL7 Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YLL7_9CYAN Length = 872 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 165/436 (37%), Positives = 266/436 (61%), Gaps = 5/436 (1%) Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDA 283 ++R + +R A D++T LPNR + + A+ ++ +GV +LDLD FK VND Sbjct: 424 QKRVESIIRYQACHDALTHLPNRLLFDEQLALALANSKQQPELLGVAFLDLDRFKVVNDT 483 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILTRLR 342 GH GDQLL+ V+ + CL + +AR GGDEF +L + TS + +A RIL +L Sbjct: 484 LGHGIGDQLLQQVATRLKQCLRNCDTIARWGGDEFTLLFPHLTSTDEITKIAHRILDKLS 543 Query: 343 LPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQR 402 +PF I E+Y + S+GIAL P D+ +++HAD AMY AK+ GR F VF EM++ Sbjct: 544 IPFVIDNQELYVTASLGIALCPYDAEDAQTLLKHADAAMYRAKKQGRNNFQVFAEEMHRE 603 Query: 403 VFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISY 461 L L+ +LR+AL ++ +++YQP++ G++ LEAL+RWQ P G +PP FI Sbjct: 604 ALNQLTLEADLRRALIKEEFLLYYQPQVEISTGKIVGLEALIRWQHPTLGFVPPDQFIPL 663 Query: 462 AEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQEL 520 AEE GLI P+G+WV+ Q W+ +G+ +R+AVN+SARQ + + Q L+ Sbjct: 664 AEEIGLIAPIGQWVLQTACIQHQSWQAEGLPPVRIAVNLSARQFHQSQLINIILQTLETT 723 Query: 521 NFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAI 580 + +++E+TES +++ E + +Q+ ++G + +DDFGTGYSSL+ L FP++ + Sbjct: 724 EIDPQYLELEITESAAMQDVEFTIQTLQELREMGLHITIDDFGTGYSSLNVLKHFPLNTL 783 Query: 581 KLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFL 640 K+D+ FV+DI + ++ + IVA++Q L L+V+AEGVE+ ++ +FL + QG+ Sbjct: 784 KIDRSFVQDIVENSRDAAIAQTIVALSQGLKLKVVAEGVETPQQLSFLRSIHCDLAQGYY 843 Query: 641 FAKPMPAVAFERWYKR 656 F P+PA+ + ++ Sbjct: 844 FCPPVPAIEIAKLLRQ 859 >UniRef50_Q5ZVT3 Inner membrane protein PLUS sensory box protein LssE n=6 Tax=Legionella pneumophila RepID=Q5ZVT3_LEGPH Length = 792 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 166/429 (38%), Positives = 263/429 (61%), Gaps = 4/429 (0%) Query: 232 RLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFG 289 RL AN DS+TGLPNR A+ D +DHAIN+ N + V++LD+DNFK +ND+ GH G Sbjct: 352 RLAYQANHDSLTGLPNRTALYDRLDHAINYCKRLNTSLSVLFLDIDNFKLINDSLGHDAG 411 Query: 290 DQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGL 349 D LL + S + C+ H +AR GGDEF++L T + +A IL + P ++ Sbjct: 412 DILLYEFSRRLKGCIRHSDTVARFGGDEFVLLLMTTEPKDVILIAQNILKAVAQPIKLPT 471 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWL 409 EV + S+GI+L P+ G D++ +++++DTAMY AK+ GR F + +NQ+ + L + Sbjct: 472 QEVIVTTSIGISLFPKDGIDASTLLKNSDTAMYLAKKEGRNNFQFYNNSINQQSLKRLEI 531 Query: 410 DTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 T + A++N++ I YQP R GE+ EAL+RW P GL+ P +FI AEE+GLI Sbjct: 532 QTQIHNAIKNNEFFILYQPIYNLRSGELVGAEALIRWGHPAIGLLSPDEFIPIAEETGLI 591 Query: 469 VPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPI 527 +G WV+ + Q W+ G+ ++ ++VN+S RQL + + VL+E + + Sbjct: 592 NQVGEWVLRNACVQNKTWQLMGLPHISISVNVSWRQLKNSNFIEIAESVLKESRLDPQYL 651 Query: 528 DVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFV 587 ++E TES +I+ S + + SQLG ++ +DDFGTGYS+LS L FP D +K+D+ F+ Sbjct: 652 EIEFTESTMIQKSTPIDSTLIKISQLGIKMAIDDFGTGYSNLSYLKTFPFDKLKIDRSFI 711 Query: 588 RDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 ++ P S+V AI+A+A +L L+V+AEGV++ + F+ ++G +E QGFL+ P+ A Sbjct: 712 QNCTTNPNDASIVEAIIAMAHSLELKVLAEGVDTIDKAFFMHQHGCDEVQGFLYGLPVKA 771 Query: 648 VAFERWYKR 656 F + ++ Sbjct: 772 DKFVKLMQK 780 >UniRef50_C6MV72 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MV72_9DELT Length = 594 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 191/549 (34%), Positives = 300/549 (54%), Gaps = 29/549 (5%) Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 + I I D+ G I N + G ++IG+ L RR+ R N+ Sbjct: 46 AGITISDTDGKIIYVNAAESEMHGYAPGELIGKQA-SLLAPRRDVVLPRINHGT------ 98 Query: 182 AYEVELWIPTCKGQRLFLFRNKFV----------HSGSGKNEIFLICSGTDITEERRAQE 231 + LW K + L + ++ V + SG+ + ++ + DIT + + Sbjct: 99 ---IGLW----KRESLNVRKDGLVFPVQLTSLPIKNASGRC-LGMVTACEDITARKEFER 150 Query: 232 RLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFG 289 +L LA D++T LPNR + D + A+ A + ++ +++LDLDNFK +N A GH G Sbjct: 151 QLETLAYYDTVTKLPNRALLMDRLHQALALAQREGRELALLFLDLDNFKDLNSARGHEVG 210 Query: 290 DQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMASRILTRLRLPFRIG 348 D+ L++V+ + SCL LARPGGDEF +V+ S + + A A+R+ PF I Sbjct: 211 DKFLQEVAARLASCLCEANTLARPGGDEFVIVINSGPDEEGVAATAARLQALFIEPFGID 270 Query: 349 LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLW 408 EVY S S+GIAL PE GSD +++R AD A+Y AK G+G + F+ EMN+R + Sbjct: 271 GEEVYGSTSIGIALFPEDGSDVESLLRCADAALYQAKSEGKGGYQFFSQEMNERTMRRVA 330 Query: 409 LDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGL 467 L+ +R+ L D+ +H+QP+ + + EAL+RWQS E GL+ P +FI AE SG+ Sbjct: 331 LENGMRQGLARDEFFLHFQPQWDLKSFRLTGAEALLRWQSAEFGLVGPDEFIPIAESSGV 390 Query: 468 IVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPI 527 I LG V+ +W + +L+VAVNIS RQ + +V++E + Sbjct: 391 IFDLGELVLRQACLHAVRWEEFCPDLKVAVNISGRQFRQPGFLETMARVVRETGVRPSSL 450 Query: 528 DVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFV 587 ++E TES ++E E + +Q ++G ++ +DDFGTGYSSL+ L FPIDAIK+D+ F+ Sbjct: 451 ELEFTESVIMERAEKNIDALQALKRMGVRLSIDDFGTGYSSLNYLKHFPIDAIKIDRSFI 510 Query: 588 RDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 ++ ++ AI+++A +L L+VIAEGVE++ + FL +E QGF FA PMP Sbjct: 511 AELVTDSDDAAIADAIISMAHSLKLKVIAEGVENSDQLHFLVGRKCDEAQGFYFATPMPG 570 Query: 648 VAFERWYKR 656 F + ++ Sbjct: 571 EEFTNYVRQ 579 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 173/449 (38%), Positives = 266/449 (59%), Gaps = 10/449 (2%) Query: 205 VHSGSGKNEIFLICSGT--DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA 262 V + +GK L GT DITE + + A D +TGLPNR MQD + AI++A Sbjct: 258 VRNDAGK---LLYFEGTVEDITERKSYNALIEYQATHDDLTGLPNRTLMQDRLLQAISYA 314 Query: 263 DN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV 320 D +K+ VV++DLD FK +ND+ GH GDQLL ++ + SC+ +ARPGGDEF++ Sbjct: 315 DRTASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMARRLESCIRDSDTVARPGGDEFVL 374 Query: 321 LASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADT 379 L SN AL R+L P I + + S+GI+L P+ G S ++++ADT Sbjct: 375 LLSNIHGMDALSQTLQRVLALTSEPCSIEGKDFTVTSSIGISLYPDDGKTSETLLKNADT 434 Query: 380 AMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRS 438 AMY AK+ G+ F +T E+N + E L ++ +R AL +++ +HYQPK+ R + + Sbjct: 435 AMYKAKQEGKNNFQFYTRELNSILVERLEMEYQMRNALGHNEFHLHYQPKLNLRTQRITG 494 Query: 439 LEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV-VRQVAKWRDKGINLRVAV 497 +EAL+RW +P +GLI P FI AEES LI +G WV+ + +A + G ++ V+V Sbjct: 495 VEALIRWHNPRQGLISPNRFIPIAEESSLIEQIGSWVLEKACMESIALSQLSGYDVPVSV 554 Query: 498 NISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQV 557 N+S RQ + + +VLQE + +++E+TE L + + V+ LG ++ Sbjct: 555 NVSPRQFQQSNLVGNISRVLQETGLKPSLLELEITEGTLADTSPQFIKVLNDLKGLGIKL 614 Query: 558 HLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAE 617 +DDFGTGYSSL L FPID +K+D+ FV + +Q++++AIVA+ L + ++AE Sbjct: 615 AIDDFGTGYSSLGYLKHFPIDNLKIDRSFVMGLESDTANQAILKAIVALGHNLGINLVAE 674 Query: 618 GVESAKEDAFLTKNGINERQGFLFAKPMP 646 GVE+ ++ FL G +E QGFLF++P+P Sbjct: 675 GVETERQRDFLLSIGCDEMQGFLFSQPLP 703 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 188/542 (34%), Positives = 294/542 (54%), Gaps = 7/542 (1%) Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 AI++ D I N TG +V G S +L S R +A R S Sbjct: 858 AIMVSDRDNRILEVNDAFCRLTGYAADEVRG-SDPRLLSSGRTSAEEYRTMWQAINSTGH 916 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 ++ E+W G + + G+ N + I S DI+E + A+E++ LA+ D++ Sbjct: 917 WQGEVWDRRKDGSYYPKWLSISTIRGAEGNTEYYIGSFVDISERKAAEEKISHLAHFDTL 976 Query: 243 TGLPNRNAMQDLIDHAINHA----DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSL 298 T LPNR+ +Q +D A+ A V V++LDLD FK +ND GH GD LL +V+ Sbjct: 977 TDLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAA 1036 Query: 299 AILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSV 358 + S + V+AR GGDEF+V+ + A E +A +IL L ++I ++++ S+ Sbjct: 1037 RLRSSVRDSDVVARLGGDEFVVVLTGADALAAERVAGKILKALSRAYQIEGHALHSTSSI 1096 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 GIA+ P G ++++AD AMY AK GR FT MN+ + L+ +L AL+ Sbjct: 1097 GIAVFPADGESVEVLMQNADAAMYHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQ 1156 Query: 419 NDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 Q V+HYQP++ + V ++EAL+RWQ P GL+PP F+ AE++GLIVP+G+WV+ Sbjct: 1157 QKQFVLHYQPQVDAQRRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLET 1216 Query: 479 VVRQVAKWR--DKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 Q+ W + L+VAVN+SARQ L+Q + + +ELTES + Sbjct: 1217 ACAQIKAWSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLV 1276 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 ++N + + LG +DDFGTGYSSLS L R P+D +K+D+ FV + + Sbjct: 1277 LDNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSD 1336 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 + + IV + ++L L+V+AEGVE+ + FL +G + QGFLF++P+ AFE + + Sbjct: 1337 AVIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFLQG 1396 Query: 657 YL 658 ++ Sbjct: 1397 FV 1398 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 189/565 (33%), Positives = 312/565 (55%), Gaps = 49/565 (8%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 LS A ++ + + +VI D NI N TG + +VIG Sbjct: 268 LSLASKIFNNSQEGMVITDRNANIIDVNTAFTQITGYRSEEVIG---------------- 311 Query: 170 RRNNRVFFRSGN---AYEVELWIP-TCKGQRLFLFRNKFVH---SGS------------- 209 +N R+ RSG+ + +LW KGQ ++ +F++ GS Sbjct: 312 -KNPRIL-RSGHHDQGFYKQLWHQLETKGQ----WKGEFINRKKDGSIYPQLATISAVMD 365 Query: 210 GKNEIF-LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNK 266 KN + IC DI+ + +E+L+ +A D +T LPNR + L++ I H + Sbjct: 366 DKNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQT 425 Query: 267 VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT- 325 ++LD+D+FK +ND+ GH GDQLL +++ + L + +AR GGDEF+++ + Sbjct: 426 FATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDVH 485 Query: 326 SQSALEAMASRILTRLRLPFRIGLIE-VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 S AL IL+ + PF + + + S S+GIAL P G DS ++++ADTAMY A Sbjct: 486 SDVALLETVGDILSVFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTAMYLA 545 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALV 443 K+ GR + ++P++ + ++ + + L +A+E QL + +QP+ + + +E L+ Sbjct: 546 KKNGRNGYAFYSPDLTDKSVSHVRIQSALHQAIEKQQLRLEFQPQYNLEQHAIVGVETLL 605 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISAR 502 RWQ PE GL+PP DFI AE++GLI +G WV+L +Q W ++G+ R+AVN+SA Sbjct: 606 RWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIAVNVSAL 665 Query: 503 QLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDF 562 QL L +L + F +D+E+TES L+ + + A++ + Q +LG ++ LDDF Sbjct: 666 QLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELGIEISLDDF 725 Query: 563 GTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESA 622 GTGYSSLS L PI+ +K+D+ FV D+ S ++V AI+A+ + L+L+V+AEG+E+ Sbjct: 726 GTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGIETQ 785 Query: 623 KEDAFLTKNGINERQGFLFAKPMPA 647 ++ +L + G QG+LF++P+ A Sbjct: 786 EQADYLFEKGCVYGQGYLFSRPVSA 810 >UniRef50_Q0BFB8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=5 Tax=Burkholderia RepID=Q0BFB8_BURCM Length = 860 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 165/429 (38%), Positives = 265/429 (61%), Gaps = 5/429 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKK 279 DITE + Q R+ LAN D++TGLPNRN + D ++ A++ A V V+ LDLD FK Sbjct: 251 DITERKMQQGRIEYLANHDALTGLPNRNLLSDRMEQAMSQARRTGQLVAVMVLDLDRFKH 310 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRIL 338 +ND++GH GD LLR V+ + + +AR GGDEF+V+ N +Q+ + +A +IL Sbjct: 311 INDSFGHSVGDGLLRVVAARLKRSVRDGDTVARLGGDEFVVMLVNLATQADADVIARKIL 370 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 PF + +++ + SVG++L P G+++ +++ AD A+Y AKE GR + +T E Sbjct: 371 DTFIEPFTLDEHDLHVTTSVGVSLCPTDGTNAETLLKTADAALYAAKEHGRNCYRFYTRE 430 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 + RV E L+ L +A+ N +L ++YQPK+ + G++ +EAL+RW+ P G+IPP Sbjct: 431 LGARVEEQTILENALHQAVANHELELYYQPKVDLKTGQISGVEALIRWRRPGIGVIPPDR 490 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQV 516 FI AE+ GLI+P+G WV+ Q WR +G +R+AVN+SARQ Q + ++ Sbjct: 491 FIPIAEDCGLILPIGEWVLRTACMQAVAWRREGHPPIRIAVNLSARQFRQQDVAAMVRTT 550 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L+E +++ELTES L+++ +++ LG + LDDFGTGYSSLS L P Sbjct: 551 LEETGLAPDSLELELTESVLMQDCNAIAHTLRELKALGVVLSLDDFGTGYSSLSYLKDLP 610 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 ID +K+D+ F+ D+ SL R+I+A+A++L+++ +AEGVE+ + +FL ++ + Sbjct: 611 IDVVKIDRSFLDDVTTSAEGASLTRSIIAMAESLHMETVAEGVETEAQLSFLNRHRCHAM 670 Query: 637 QGFLFAKPM 645 QG+ F+ P+ Sbjct: 671 QGYYFSHPV 679 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 193/565 (34%), Positives = 310/565 (54%), Gaps = 6/565 (1%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 R +A ASA + + L F + ++ I D+ N E + G Sbjct: 93 RIFAARASAELERTKAEQARREQLHFLQVLIDSIPHPIFYKDADRRYIGCNAALESFIGR 152 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 ++IG++VF + R + ++ G I T R +F +K V Sbjct: 153 TREEIIGKTVFDIGAEGRARICDAVDRKLLANGGVESYDSTMIHTDGSIRDIIF-SKTVF 211 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DN 264 + + ++ + DITE +RA+E ++ LA D++TGLPNR ++D + ++ A + Sbjct: 212 GNTDGSIGGIVGTILDITERKRAEEAIQQLAYFDALTGLPNRTLLRDRVSQLLSQARREG 271 Query: 265 NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN 324 GV++LD+D FK VND+ GH GD LL V+ I S + +AR G DEF+V+ Sbjct: 272 GGFGVLHLDVDRFKGVNDSLGHACGDVLLSTVAGRIASSIRESDTVARLGSDEFVVILPG 331 Query: 325 TS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 + + A+ +I+ L P I +++ + S+GIA+ P GS + ++++AD AM+ Sbjct: 332 VGHEEDVVAVVRKIVEELNRPIVIQGNDIFCTASIGIAIYPTDGSSADILLKNADMAMHK 391 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEAL 442 AKE G + ++ E+N R E L L+T+LR+ALE + ++HYQP + G + +EAL Sbjct: 392 AKEFGGDGYQFYSSELNHRAMERLTLETSLRRALERREFLLHYQPLLGIGSGRIVGVEAL 451 Query: 443 VRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISA 501 +RW SPE G++ P FI AEE+GLIVP+G WV+ Q+ + G L V+VN+SA Sbjct: 452 LRWDSPELGMVSPARFIPLAEETGLIVPIGEWVLRSACEQLRALHELGYTELCVSVNVSA 511 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 RQ + VL + + +++ELTES ++E E A ++++ Q+G + +DD Sbjct: 512 RQFRHDGFCAMVAAVLAAVGLDPRYLELELTESVIMERSETAKGILRKLKQMGVSLAIDD 571 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSLS L FPID +K+D+ FV+++ + ++ AIVA+A LNL V+AEGVE+ Sbjct: 572 FGTGYSSLSYLKHFPIDRLKIDRTFVKEVTVDQDNAAIAEAIVALAHVLNLDVVAEGVET 631 Query: 622 AKEDAFLTKNGINERQGFLFAKPMP 646 A++ AFL + QG+ A+P+P Sbjct: 632 AEQLAFLAALRCDVVQGYHIARPLP 656 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 182/545 (33%), Positives = 298/545 (54%), Gaps = 9/545 (1%) Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 LS A QV A I++ S + N D TG +V+G++ K S R Sbjct: 393 ALSLASQVFDNASEGIMVTGSDNRLLTVNDAFVDITGYSADEVVGKNP-KFLQSGRHDET 451 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 R+ + + E+W G+ + + + S I S TD+TE ++ Sbjct: 452 FYRSMWQMINTSGYWRGEIWNRRKNGEVFPQWLSIQAVTDSAGMARNYIASITDLTERKQ 511 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAIN---HADNNKVGVVYLDLDNFKKVNDAYG 285 +E+LR L++ D +T LPNR + +D ++ + + ++Y+DLD+FK +ND+ G Sbjct: 512 VEEKLRYLSDFDPLTNLPNRRLLGYRVDQTLSLSRRQPDQQFALLYIDLDHFKNINDSLG 571 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTRLRLP 344 H FGD++L+ V+ I + ++R GGDEF++L + A +A RIL + P Sbjct: 572 HRFGDEILQKVAKRITELVREGDTVSRLGGDEFMILMPELHKLEQAANLAERILHNIAQP 631 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 + + SVGIA+ P G ++R+AD A++ AK GR + +T EMNQR Sbjct: 632 LE-NDSHLMITPSVGIAVYPNDGDSFDKLLRNADAAVHFAKRQGRNNYQFYTAEMNQRAS 690 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAE 463 E L ++ +LRKA+EN + + YQP++ R G + +EAL+RW+ P GL+PP FI AE Sbjct: 691 ERLQVEISLRKAVENQEFELFYQPQLNLRDGSLAGVEALIRWRHPNEGLVPPNRFIPLAE 750 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNF 522 E+GLI+ +G WV+++ RQ A+W K ++VN+S RQ + + ++ L Sbjct: 751 ETGLILQIGSWVLVEACRQGAEWAAKSTEPFTMSVNVSVRQFRPELV-EEVRSALLTSGL 809 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 + +E+TES L++++E L+++ + +LG Q+ LDDFGTGYSS++ L RF +D +K+ Sbjct: 810 SPKSLVIEITESTLMQDEEKTLTLLHELKELGVQLSLDDFGTGYSSMAYLKRFNLDQLKI 869 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 D+ F+ D+ + P ++ AI+ VA L +AEG+E ++ FL G E QG+ + Sbjct: 870 DRAFISDLPQNPDDAAITSAIIDVASHFGLVTVAEGIEKPEQAEFLASVGCIEGQGYYYE 929 Query: 643 KPMPA 647 KP+PA Sbjct: 930 KPIPA 934 >UniRef50_A1TXD5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXD5_MARAV Length = 709 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 201/566 (35%), Positives = 305/566 (53%), Gaps = 28/566 (4%) Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 GL A V +H AIVI D +I N TG +V+G + L + Sbjct: 138 GLRIAASVFDRSHEAIVITDHLNHIIDVNPAFSRITGYSRQEVLGLNPSIL--------S 189 Query: 169 SRRNNRVFFRS-------GNAYEVELWIPTCKGQRLF-LFRNKFVH-SGSGKNEIFLICS 219 S R++R ++RS + + E+W G+ L VH GK+ + + + Sbjct: 190 SGRHSREYYRSMWQSIEKTDHWRGEVWNRRKNGEEYVELLSISRVHLEEPGKH--YYVAA 247 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNF 277 +DIT + + L AN D +TGLPNR +++ + A HAD K + + YLDLD F Sbjct: 248 FSDITALKNHAKELDRAANYDDLTGLPNRQLLEERLRSAKAHADRQKRSLAICYLDLDGF 307 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRI 337 K +ND GH FGD+ LR V+ + L +AR GGDEF++L E + RI Sbjct: 308 KGINDELGHDFGDEALRMVAERLTRSLRSGDTVARIGGDEFVLLIQGDHS---EPLYQRI 364 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 LT + PF + EV + S+G+ L PE +D+ ++RHAD AMY AKE GR QF +F P Sbjct: 365 LTSVSEPFELADKEVNLTASLGVTLYPEDDTDAEGLVRHADQAMYAAKEKGRNQFHIFDP 424 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPL 456 E + +ALEN++ +++QP++ +V + EAL+RW PE+GLI P Sbjct: 425 GQYAFRKERRNQLMEISRALENEEFELYFQPQLRMADCQVIAFEALIRWNHPEKGLIAPG 484 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQV 516 F+ S L +PLG+WV+ + + Q+ +WR+ G L V++NISA L D+ L+ Sbjct: 485 AFLPAVANSHLEIPLGQWVLKEAIHQMNRWREAGEALAVSINISAPHLMDRKFVDYLEGY 544 Query: 517 LQELNFEYCP--IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 LQ + E P I +E+ ES +E+ + A +V+ + LG QV LDDFGTG+SSL+ L Sbjct: 545 LQS-HPEVSPGQITLEVLESTALEDTKRASNVLARCQSLGLQVALDDFGTGFSSLTYLRT 603 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 P+D IK+DQ FVR++ +++V +++ +AQ + V+AEGVE+ A L G N Sbjct: 604 LPVDVIKIDQSFVRNMLTDANDRAIVESVIFLAQRFDHPVLAEGVETMDHAAALRDMGCN 663 Query: 635 ERQGFLFAKPMPAVAFERWYKRYLKR 660 QG+ A+PMP+ A W + + ++ Sbjct: 664 LVQGYGIARPMPSGAVLEWLQHWRRQ 689 >UniRef50_B0C4Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=2 Tax=Cyanobacteria RepID=B0C4Z3_ACAM1 Length = 754 Score = 318 bits (815), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 172/439 (39%), Positives = 266/439 (60%), Gaps = 10/439 (2%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI---NHADNNKVGVVYLDLDNFK 278 DITE++RAQ +L A D +TGLPNRN M + I ++ + + + ++++DLD FK Sbjct: 282 DITEQKRAQAQLIHDAFHDELTGLPNRNLMMERISQSLKRQHRTSDYQFALLFIDLDRFK 341 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM--ASR 336 +ND+ GH+ GDQLL ++ + +C+ +AR GGDEF +L Q +A+ A R Sbjct: 342 IINDSLGHIVGDQLLVAIAHLLENCVRTSDTVARLGGDEFTILLDGI-QGIEDAIHVAER 400 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 IL L+ PF++G V+T S+GIA + D T ++R AD AMY AK G+G F VF+ Sbjct: 401 ILETLKSPFQVGEHSVFTGSSIGIAYNSVQYDDPTLLLRDADIAMYRAKSLGKGCFVVFS 460 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPP 455 PEM+ + L L+ +LR A++ + V++YQP I + G++ +E LVRWQ P+RGL+ P Sbjct: 461 PEMHAQTLSLLKLERDLRSAVDRQEFVLYYQPIIDLQSGDLTDVEVLVRWQHPDRGLVMP 520 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK---GINLRVAVNISARQLADQTIFTA 512 +FI AEE+GLIV +G+WV+ + + + ++ + L+ +VN+S+ QL D Sbjct: 521 SEFIPLAEETGLIVEIGQWVLQEACQTLRDYQQQFASATELKFSVNLSSEQLQDPNFIQT 580 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + +VL + + + +ELTES L+ ++E + +QQ + LDDFGTGYSSLS L Sbjct: 581 VDRVLSQSGLDGRYLKLELTESMLMSHEEKHIKTLQQLRDRSITISLDDFGTGYSSLSYL 640 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 RFP+D +K+DQ FV + +P +V I+++A+ LN+ VIAEG+E+ +E L K G Sbjct: 641 YRFPLDTLKIDQSFVSRMISEPKDAEIVNTIISLARTLNMDVIAEGIETEEEVLHLKKLG 700 Query: 633 INERQGFLFAKPMPAVAFE 651 QG+ F+ PM E Sbjct: 701 CERGQGYWFSPPMSQEKLE 719 >UniRef50_C0N514 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N514_9GAMM Length = 1084 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 188/544 (34%), Positives = 311/544 (57%), Gaps = 15/544 (2%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 ++ A I L R + R N E+ G D+ GQSV L+++ E A + Sbjct: 537 ILDNAMVGIAFLRDRQFV-RVNEKFEELFGYTRDDIEGQSVQCLYLN--EDAYLQFGEEA 593 Query: 176 FFR--SGNAYEVELWIPTCKGQRLFL-FRNKFVHSGSGK-NEIFLICSGTDITEERRAQE 231 + + SG+ YE +L + GQ + K + +GS K I+L DIT +R+ +E Sbjct: 594 YHQLTSGDNYEAQLEMVRKDGQVFWCGISGKAIDAGSPKAGTIWLF---EDITIQRQNEE 650 Query: 232 RLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFG 289 L LA+ D +TGLPNR D ++HAI+ + N ++ V +LDLD+FK +ND+ GH G Sbjct: 651 HLTRLASIDGLTGLPNRAVFTDRVEHAIHKSMRNSGRLAVFFLDLDHFKHINDSLGHKAG 710 Query: 290 DQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIG 348 D LL +V+ I +C+ +AR GGDEF +L + S + +A +++ + P++I Sbjct: 711 DILLTEVAGRIKACVREGDTVARLGGDEFTLLLEDVRSAEYVGKVAEKVIKSMTQPYQIE 770 Query: 349 LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLW 408 EV S S+GI+L P G D ++R+AD AMY AK+ GR F ++ EMN + L Sbjct: 771 NTEVNISPSIGISLYPADGRDVDMLVRNADAAMYHAKKVGRNNFQFYSAEMNAEAAKRLA 830 Query: 409 LDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGL 467 ++T LR+ +E L +HYQP++ + G++ E L+RWQS + G + P +F+ E++G+ Sbjct: 831 METALRRVVEQQDLHLHYQPQVNLQTGKLVGAEVLLRWQSEQWGNVSPAEFVPMLEDTGM 890 Query: 468 IVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCP 526 I +G W++ +W ++ N +AVN+S RQ ++ ++++L E Sbjct: 891 ITQVGEWILRQACATYLEWSERLPDNFMMAVNLSGRQFKGGSLAAFIRRLLDETGMPAAH 950 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 +++E+TES L+++ ELA + + S + + +DDFGTGYSSLS L +FP++ +K+D F Sbjct: 951 LELEITESMLMDDTELATITLAELSAMNISLAIDDFGTGYSSLSYLKQFPLNVLKIDSSF 1010 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 VRD+ ++V AI+A++ +L L+V+AEGVE+A++ +L ++ QGFLF+K + Sbjct: 1011 VRDVTSDKDDAAIVDAIMAMSNSLGLKVVAEGVETAEQRQYLLRHDCRLAQGFLFSKAVD 1070 Query: 647 AVAF 650 F Sbjct: 1071 KDKF 1074 >UniRef50_B7KEB0 Diguanylate cyclase/phosphodiesterase n=6 Tax=Bacteria RepID=B7KEB0_CYAP7 Length = 684 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 158/433 (36%), Positives = 257/433 (59%), Gaps = 5/433 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKK 279 DIT+ + A+ L A D++T LPNR+ + + A+ A + + V+++DLD FK Sbjct: 241 DITDRKMAENSLHYQAYYDTLTDLPNRSLFYEKLSTALAKAYLEETLIAVMFIDLDGFKN 300 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRIL 338 +ND GH GD+LL + + L +LAR GGDEF +L ++ +E A R+ Sbjct: 301 INDTLGHTLGDELLGSFAQRLRHNLRSSDILARWGGDEFTILIPQIKNEEEIEICAKRVF 360 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 + L+ PF++G +Y S+G+A+ P G D+ II++AD A+Y KE GR + ++ P Sbjct: 361 SILQQPFQVGNHLLYLKASIGVAIYPRDGQDAETIIKNADAALYRTKEMGRNHYQIYHPL 420 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLD 457 + + E L ++ L +ALE DQ ++HYQP+I + + + +EAL+RW+ P GL+ P Sbjct: 421 ITSKTSERLEMENLLHQALEKDQFLLHYQPQINIKNQAICGMEALIRWEHPTLGLVSPAK 480 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQV 516 FI AEESGLI+ +G WV+ Q W+ KG+ +RVAVN+SA+Q + ++ Sbjct: 481 FIPIAEESGLIISIGEWVLRQACEQNRLWQKKGLPPVRVAVNLSAQQFQQPNFVNIVTKI 540 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L E N E +++E+TE+ +++N E + ++ +G + +DDFGTGYSSL L + P Sbjct: 541 LAETNLEPQFLELEITETTIMKNLEFSCQIVHDLKHMGVHISMDDFGTGYSSLGYLKQIP 600 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 + IK+DQ F++D+ +P +++ A++A+ + N++VIAEGVE+ + L K E Sbjct: 601 FNTIKIDQSFIKDLQDKPQDLAIISAVLAIGRGFNVRVIAEGVETQHQVELLRKLECEEM 660 Query: 637 QGFLFAKPMPAVA 649 QGF F+KP+ A Sbjct: 661 QGFKFSKPLKPEA 673 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 179/553 (32%), Positives = 318/553 (57%), Gaps = 9/553 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 + A +V ++ I+I DS I N + +G + +G++ ++ S R + Sbjct: 913 IELASKVFEQSREGIMITDSNQKILMVNEAFSEISGYSVEETLGKTP-RMLASGRHSREF 971 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRL--FLFRNKFVHSGSGKNEIFLICSGTDITEER 227 +N + ++ E+W G+ +L ++ + + E I + DI++ + Sbjct: 972 YQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNVTEYVGIFN--DISKVK 1029 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYG 285 ++E+++ LA+ D +TGL NR + D ++H+I+ AD N + ++++DLD+FK VND G Sbjct: 1030 ESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLALLFIDLDHFKNVNDTLG 1089 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPF 345 H GDQLL +V IL L + +AR GGDEF+V+ +T ++ +A +IL + Sbjct: 1090 HQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPDTGENGAVHVAEKILESISDQL 1149 Query: 346 RIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 + +++ + S+GIA+ P+ G D+ +++++ADTAMY AK GR + FT EM Sbjct: 1150 NLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNVYRFFTMEMQAHSSR 1209 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 + +++ LR AL + Q ++YQP+ + G + +EAL+RW PE G + P +FI AE+ Sbjct: 1210 IMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIRWNHPEMGPVSPQEFIPVAEQ 1269 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFE 523 SG I+ +G WV+ +RQ+ W + G ++VAVN+SA Q + + + ++L+E Sbjct: 1270 SGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQFRYEDLPKQVMKILEEEGVS 1329 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 +++ELTES + N E + ++ + G ++ +DDFGTGYSSLS L RF + +K+D Sbjct: 1330 PEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFGTGYSSLSYLKRFKVSKLKID 1389 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 Q F+RD+ +S++ AI+++++AL L+ IAEGVE+ + FL + +E QGF ++K Sbjct: 1390 QSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQAQLDFLQEKQCDEIQGFYYSK 1449 Query: 644 PMPAVAFERWYKR 656 + AF+ +Y++ Sbjct: 1450 ALTPEAFDAFYEK 1462 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 318 bits (814), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 199/553 (35%), Positives = 292/553 (52%), Gaps = 12/553 (2%) Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 A V I I D G IQ N TG E +VIG L R A R Sbjct: 259 AATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAEAEVIGCHTRILQSGRHGADYYRAM 318 Query: 173 NRVFFRSGNAYEVELWIPTCKGQ---RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 R R+G ++ E+W G+ + G N + + +DI++ + A Sbjct: 319 WRTLARTGQ-WQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVSNYVAVF---SDISQIKDA 374 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHL 287 Q +L LA+ D +TGLPNR + D + HAI+ A V V++LDLD FK VND+ GH Sbjct: 375 QSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLDLDGFKNVNDSLGHP 434 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFR 346 GD+LL+ ++ + L + ++R GGDEF V+ + + A+ +A ++ + P Sbjct: 435 AGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVVRGEAVSEVAEHLIAEIARPLD 494 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 + + S S+GIAL P G D+T +I+ ADTAMY +K GR F +M Q Sbjct: 495 LDGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRSKALGRNTFSFHHEDMAQAAHRR 554 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEES 465 L L+ LR+ALE + + YQP+I R G + EAL+RW+ PERGL+ P +F+ AEE+ Sbjct: 555 LSLEHGLRQALEQGRFELWYQPQIDLRTGVLAGAEALLRWRDPERGLVSPAEFVPLAEET 614 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEY 524 GLI+P+G WV+ + R W D G+ R+AVN++A Q+ A+ +VL Sbjct: 615 GLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVNVAAPQIERGGFDQAVARVLSASGLPP 674 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 ++VE+TE L+ + E A + LG V +DDFGTGYSSL+ L + +K+D+ Sbjct: 675 AALEVEITEGSLLRSAENARLAVAALRALGVGVAIDDFGTGYSSLAYLKNLAVQTLKIDR 734 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 FVRD+ + ++ RAI+A+ ++L V+AEGVE + AFL G QG+LFAKP Sbjct: 735 EFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEGVEEPAQAAFLVSEGCTLAQGYLFAKP 794 Query: 645 MPAVAFERWYKRY 657 MP F W + Y Sbjct: 795 MPGAEFAEWLRTY 807 >UniRef50_C6X941 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X941_METSD Length = 738 Score = 318 bits (814), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 169/431 (39%), Positives = 259/431 (60%), Gaps = 5/431 (1%) Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 DITE ++A++ + A D++T LPNR +D + AI+HA NK + +++LDLD FK Sbjct: 281 DITERKKAEQAITHQAYHDTLTDLPNRMLFKDRLTVAIHHAKRNKHKLAIMFLDLDRFKW 340 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRIL 338 VND GHL+GD+LL+ V+ + +C+ LAR GGDEF +L +Q +A +I Sbjct: 341 VNDTLGHLYGDELLKQVAARLRNCMREQDTLARMGGDEFTMLLHELNQPDDATVIAQKIF 400 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L+ PF + E++ S S+GIA+ P+HG +I+ AD AMY K G+ F + P Sbjct: 401 DELKRPFMLDDREIFISSSIGIAIYPDHGDSIENLIKRADIAMYHVKWRGKNGFQYYDPS 460 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLD 457 MN + L L+ LR+A+E Q+V++YQPKI G V LEAL RW PE GL+ PL+ Sbjct: 461 MNSMFHKKLSLENELRRAIEKRQIVLYYQPKIHLDGHCVIGLEALARWHHPELGLVSPLE 520 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQV 516 FI AEE+GLI LG ++ + Q+ +W+D G+N +A+NIS + + + + + Sbjct: 521 FIPLAEETGLIHALGEMLLEEACVQMRQWQDAGLNNFSLAINISPQLVEEDAFVSRILTP 580 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 ++ ++E+TE+ L+ + E ++S +++ G ++ LDDFGT YSSL+ L RFP Sbjct: 581 IRHHQLSEDLFEIEITENLLMRDVESSISKLKELGSHGIKIALDDFGTCYSSLAYLRRFP 640 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 I ++K+D+ FV DI + S++ AI +A L +IAEGVE+ + L G + Sbjct: 641 IHSVKIDKSFVSDISSTSENASIISAIAGIANGFKLDLIAEGVETIPQMHTLQSLGCTKM 700 Query: 637 QGFLFAKPMPA 647 QGFLF+KP+PA Sbjct: 701 QGFLFSKPLPA 711 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 317 bits (813), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 195/560 (34%), Positives = 298/560 (53%), Gaps = 48/560 (8%) Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 +IVI DS G+IQ N E+ TG K +VIGQ N R+ +SG Sbjct: 553 SIVITDSEGDIQYVNPKFEEITGYKAGEVIGQ-----------------NPRIL-KSGYT 594 Query: 183 YEVE---LWIPTCKGQRLFLFRNKFVHSGSGKNEIF------------------LICSGT 221 E E LW G++ + +F H+ E+F I Sbjct: 595 TEPEYDVLWRQITSGKQ---WSGEF-HNKKKNGELFWEHASICPMRDEEGYITHFIAVKE 650 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKK 279 DIT+++ +E L AN D++T LPNR + D + AI A ++ V V+++DLD+FK Sbjct: 651 DITQQKHNEEILAHQANYDALTDLPNRTLIFDRLRQAITEAQVHHSNVAVMFIDLDHFKN 710 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRIL 338 +ND GH GD LL++ + + C+ + R GGDEFL++ E +A+++L Sbjct: 711 INDTLGHELGDFLLKEAGMRLRGCIRKTDTVGRLGGDEFLLIIPKLDDLVQAEYIANQVL 770 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L PF + E + S S+GIA P+ G + + ++R+ADTAMY AK+ GR F FT Sbjct: 771 DVLGEPFNLCGEEAFISASIGIASYPQDGKNVSTLVRNADTAMYAAKQEGRNVFAFFTQN 830 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 MN + ++ LR A+ ++L + YQP I ++ EAL+RW +PE G I P Sbjct: 831 MNDEAQSRIIIENQLRHAISRNELSVVYQPFIHLNTSQIVGAEALMRWYNPELGNIRPDQ 890 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQV 516 FI+ AEES LIV LG W++ ++VA W +G N L VAVN+S RQL + + + Sbjct: 891 FIAIAEESRLIVDLGEWILSQACQEVANWHQQGNNGLWVAVNMSPRQLRTPNLVNVIIEA 950 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 + +++E+TE L+E S+I+Q + L ++ +DDFGTGYSSLS L RFP Sbjct: 951 IANNGLSSDCLELEITERSLVEEVPGVQSLIKQLNHLKIRLAIDDFGTGYSSLSYLKRFP 1010 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 +K+D+ F+ D+ + +LV+ ++ +A L L V+AEG+E+ + FL G + Sbjct: 1011 FSVLKIDKSFISDLPDDQDAIALVKTMITMAHGLGLVVVAEGIETTAQLDFLCNQGCDYG 1070 Query: 637 QGFLFAKPMPAVAFERWYKR 656 QG+LF+KP+P F + +R Sbjct: 1071 QGYLFSKPLPPAQFRAYLQR 1090 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 317 bits (813), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 194/554 (35%), Positives = 311/554 (56%), Gaps = 14/554 (2%) Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 GL A+ + A AIVI D++G+I N + G +++GQ+ L R + Sbjct: 711 GLVLAKMIFDNAGEAIVITDAQGDITDVNPAYQRIMGYTRDEIVGQNPSILKSGRHDEQF 770 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT----DIT 224 + G+ ++ E+W G+ +F K++ + ++E +I + DIT Sbjct: 771 YEQMWNEMLSEGH-WQGEIWDRRKSGE---IF-PKWLTIDAIRDEQGVISNFVGLFMDIT 825 Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVND 282 +++ +E+L LA D +T LPNR +D ++ + + +G+ ++DLD FK VND Sbjct: 826 QQKETEEQLEKLAYYDPLTELPNRALFRDRLEQEMRLSARGGKSLGLFFIDLDRFKYVND 885 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRL 341 + GH GD LL V+ I L +AR GGDEF V+ Q+ + +A I+ L Sbjct: 886 SLGHDKGDDLLIQVAGRIKHHLRTSDTVARLGGDEFTVILPGIEQTNDVARIAGAIVKSL 945 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 F + EV+ S+GIA+ P+ G D + +HADTAMY AKE GRG + FT +MN+ Sbjct: 946 GEVFVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHADTAMYRAKEEGRGTYKFFTSDMNE 1005 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFIS 460 L L+ LR+A+E +QL +HYQPK+ + + +EALVRW PE+GL+ P+DFI Sbjct: 1006 INGRRLSLERALRQAVECNQLTLHYQPKVDVKQCRITGMEALVRWNHPEQGLVSPVDFIP 1065 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKW-RDKGINLRVAVNISARQLADQTIFTALKQVLQE 519 AEE+GLI+ +G WV+ + R L+VA+N+SA+Q D + L++ LQ+ Sbjct: 1066 IAEETGLIITIGEWVMQQACMDAKRLARSSRHPLQVAINLSAKQFQDALLVAKLERSLQQ 1125 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 ++VE+TES + + + I + LG +V +DDFGTGYSSLS L + P++A Sbjct: 1126 SGLAPELLEVEITESLAMGDVNRTIEQIGELRALGVKVSIDDFGTGYSSLSYLKKLPLNA 1185 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ F++D++ ++V +I+++A AL L V+AEGVE+ + FL + QG+ Sbjct: 1186 LKIDKSFIQDLYLDSDDTAIVSSILSMASALGLSVVAEGVENQAQIHFLCEKECPTIQGY 1245 Query: 640 LFAKPMPAVAFERW 653 F+KP+P AFE++ Sbjct: 1246 FFSKPLPFEAFEKF 1259 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 317 bits (813), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 186/554 (33%), Positives = 316/554 (57%), Gaps = 32/554 (5%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM------SR 163 + A V + + I+I + + N TG +++G+ V L SR Sbjct: 304 MRLATSVFASSSEGILIANPNDEVIGINPAVTALTGYSVQELLGRPVSFLAPEQTVAESR 363 Query: 164 REAAASRRNNRVF-------FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 R+A+ S V+ + G + V L I T G+ G+ E + Sbjct: 364 RQASFSISEKGVWQGEALIKHKQGYTFPVALTITTVTGE-------------DGRVECY- 409 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDN 276 I + +DI+E + + R+ LA+TD++TGLPNR ++ ++ + A+ +GV+ LDLDN Sbjct: 410 INTFSDISERKANEARIHDLAHTDTLTGLPNRMSLYSGLEERL--ANVQPIGVMILDLDN 467 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF-LVLASNTSQSALEAMAS 335 FK +ND GH GDQLL +V+ ++ C+ ++AR GGDEF +VL + + +A Sbjct: 468 FKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDEFVIVLDCPQATQIVGRVAK 527 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 +L RL P+ I E+++S S+GI +SP GSD +++++ DTAMY AK G+ F F Sbjct: 528 EVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNIDTAMYAAKSSGKNNFKFF 587 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIP 454 T +M +++ E + ++ +LR+A+ ++ +HYQP++ G + +EALVRW PE G++ Sbjct: 588 TEKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWGMVH 647 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTAL 513 P FI AEE L++PLG WV+ + RQ+++W +G+ + ++VNISARQL + +FT + Sbjct: 648 PEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLFTLI 707 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 ++ + +++E+TES ++++ E + +++ G + +DDFGTGYSSLS L Sbjct: 708 DNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLSYLK 767 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 P+ +K+D+ FV+DI P ++ A +A+A+ L L ++AEGVE+ + +L G Sbjct: 768 LLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRAQGC 827 Query: 634 NERQGFLFAKPMPA 647 + QG+ F+KP+PA Sbjct: 828 DSAQGYYFSKPLPA 841 >UniRef50_A4U3H4 PAS:GGDEF n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H4_9PROT Length = 904 Score = 317 bits (813), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 194/561 (34%), Positives = 303/561 (54%), Gaps = 44/561 (7%) Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR------------ 170 A++I D++G I N E+ G D+IGQS+ L +A S Sbjct: 358 ALLISDAQGAITMANSRVEEVLGYMAEDLIGQSIEALVPKSVNSAHSEHRSAYIEAPDRR 417 Query: 171 -----RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 R + + G+ EVE+ + V + G + + + DI+E Sbjct: 418 LMLGGRTIKALRKDGSECEVEINLSR-------------VDTDQG---VMIASALRDISE 461 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDLDNFKKVNDA 283 RRA+ ++ L+ D +TGLPNR + D + A+ ++ D ++++DLDNFK +N+ Sbjct: 462 RRRAEGKIAELSFFDHLTGLPNRTLLMDRMKLAMTASYRDGKHCALLFIDLDNFKALNET 521 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL----ASNTSQSA--LEAMASRI 337 GH GDQLLRD++ +++ + D +AR GGDEFLVL A S++A +EA+ +I Sbjct: 522 LGHEIGDQLLRDIAPRLVASVREDDTVARLGGDEFLVLLVDLARTESEAANQVEAIGLKI 581 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 + L P+ + + S+G L H + +++ +D AMY AK G F P Sbjct: 582 IEALSQPYSLNNQHYVCTPSIGATLFFGH-VVADDLLKQSDLAMYKAKAEGGASIHFFDP 640 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLD 457 +M + V + ++ +LR+ L Q ++HYQP+I G + +EALVRWQ P RGL+PP D Sbjct: 641 KMEEAVIKRAKIEADLRQGLIKKQFLLHYQPQIFSNGRMTGVEALVRWQHPVRGLVPPSD 700 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQ 515 FI AEE+GLI+ LG WV+ +Q+A+W R + +L VAVN+S +Q +++ Sbjct: 701 FIPLAEETGLILQLGNWVLEAACKQLAEWATRPELADLTVAVNVSVQQFHQPEFVDHIQE 760 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 V++ + +ELTES L EN + + + G LDDFGTGYSSLS L + Sbjct: 761 VIRVTGANPERLKLELTESMLAENVQDIIKKMFALKADGIGFSLDDFGTGYSSLSYLKQL 820 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P+D +K+DQ FVRD+ P ++ + IV +AQ+L L VIAEGVE+ + FL +G + Sbjct: 821 PLDQLKIDQSFVRDVLTDPSDATIAKTIVNLAQSLGLSVIAEGVETEAQRNFLETSGCHS 880 Query: 636 RQGFLFAKPMPAVAFERWYKR 656 QG+ F++P+P FE + +R Sbjct: 881 CQGYFFSRPLPIEEFEEYARR 901 >UniRef50_A6W3H5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3H5_MARMS Length = 804 Score = 317 bits (813), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 171/447 (38%), Positives = 260/447 (58%), Gaps = 11/447 (2%) Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKV--GV 269 +E + S DIT+ + QE+++ LA D++T LPNR + I+ I A NN G+ Sbjct: 338 HEAHFLASFRDITQRKLDQEQVKFLAYYDALTNLPNRRFLNQNIEKVITTAQNNGYIGGL 397 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA------S 323 +++DLD FK +ND+ GH GD LL + S IL+CL + R GGDEF++L + Sbjct: 398 LFIDLDRFKNINDSMGHHVGDALLVEASKRILACLSQADIAVRMGGDEFVLLIPVLGDNA 457 Query: 324 NTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 +QS + +A +L++L FR+ +++ S S+GI+L P G++ I+R ADTAMY Sbjct: 458 EEAQSRVTLLAETLLSQLCQVFRLEQTDLFISASIGISLFPFDGANDAQILRQADTAMYE 517 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALV 443 AKE GR + + EM Q+V E L+ L +A+ ND+ + YQP++ G++ EAL+ Sbjct: 518 AKESGRNAYRFYRQEMQQQVAERAALEKALHRAISNDEFYLVYQPQVNEHGQLIGFEALI 577 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR---VAVNIS 500 RW + E GL+PP FI AEE GLI +G WV+ +V +Q+ W+D G+ VA+NIS Sbjct: 578 RWSNEELGLVPPNRFIPIAEEIGLIYDVGNWVLENVCQQLKAWQDIGLPPTFKGVAINIS 637 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 Q A + ++ V+ + +D+E+TE L+EN + + + + +D Sbjct: 638 PYQFAKECFVESVCDVIDRTQVDSSLLDLEITEGMLVENIASVAEKMWRLKEHNIRFSID 697 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFGTGYSSL L FPI+ +K+DQ FVRD+ P S ++ IV++A +NL V+AEGVE Sbjct: 698 DFGTGYSSLRYLQHFPINQLKIDQSFVRDLTSDPQSHVIINTIVSMATHMNLSVLAEGVE 757 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPA 647 E L G + QG+ F+KP+ A Sbjct: 758 HQVEKDILENMGCAKYQGYFFSKPVKA 784 >UniRef50_A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Clostridiaceae RepID=A8MM18_ALKOO Length = 703 Score = 317 bits (812), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 155/434 (35%), Positives = 268/434 (61%), Gaps = 7/434 (1%) Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDN 276 S TDITE++ Q +L +A D++TGL N+ +++ ++ + A+ K+ ++YLD+DN Sbjct: 256 SHTDITEQQNLQNKLHTMAYYDTLTGLYNKEMLKEEMEKLLREAETEKKKMALIYLDIDN 315 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS--NTSQSALEAMA 334 FK +ND GH GD+++ ++ + ++ ++AR GGDEF V+ T + L+ + Sbjct: 316 FKHINDILGHEIGDKMITYIANILSHQVKAPNLVARLGGDEFAVVLGEIKTIEDVLQEI- 374 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 + + LR P+ + E + S S+G+AL P+HG ++++ADTAM+ KE GR + Sbjct: 375 EKFSSYLRRPWNLNKQEFFISTSIGVALYPDHGKTLATLMQNADTAMFHIKENGRDGVGI 434 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLI 453 + P M ++ +Y+ + + LR + N++ ++YQP+I + EV EAL+RW P++G I Sbjct: 435 YAPYMTEKTLDYIQMSSQLRYGIHNEEFTVYYQPQIDLKTNEVIGTEALIRWLHPKKGFI 494 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTA 512 PP DFI +AE +G I + +WV VV Q KW+ +G N +V+VN+S++ L + Sbjct: 495 PPNDFIPFAETTGYITEIEKWVFKTVVEQKVKWQKEGYDNFKVSVNLSSKMLTHPQLLAY 554 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 +K++L E N I++E+TE+ +I+N E A V++Q +L + LDDFGTGYSSL+ L Sbjct: 555 IKKILDEYNISGDYIEMEVTETAIIDNLEKATDVLKQLKELNITIALDDFGTGYSSLTYL 614 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 + PID +K+D+ F+++I +++ ++ +A +L L+V+AEGVE+ + +L KN Sbjct: 615 QKLPIDILKIDRDFIKNIQDINDEAHILKLVIDLAHSLGLKVVAEGVETEAQLDYLRKNH 674 Query: 633 INERQGFLFAKPMP 646 + QG+ F+KP+P Sbjct: 675 CDIVQGYYFSKPLP 688 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 317 bits (812), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 169/449 (37%), Positives = 268/449 (59%), Gaps = 5/449 (1%) Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD 263 + G + + LI S DITE + A++ + LA D +TGL NR D I+ AI HA Sbjct: 659 LIGRGISEGQPALIGSLLDITERKEAEKTIEHLAFHDPLTGLANRLLFMDRIEQAIAHAH 718 Query: 264 --NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL 321 + +++LDLD FK +ND+ GH GD L++V+ + +CL ++R GGDEF VL Sbjct: 719 RHHESFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDTVSRFGGDEFNVL 778 Query: 322 ASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 S S + +E +A +IL L P+ I EV+ +CS+GIA P+ G ++ ++++ADTA Sbjct: 779 LSGPSHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGREAITLVKNADTA 838 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSL 439 +Y AK+ GR F ++ MN R E + ++++LR+ E +L +HYQP++ + G + L Sbjct: 839 LYRAKDLGRNNFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQPQVGLQSGRITGL 898 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVN 498 E LVRW+ P +I P F+ AEE+GLIVP+G WV+ Q+ W D G +R+ +N Sbjct: 899 EGLVRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWLDAGFAPMRLGIN 958 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 +SA QL + QVL+E + +++E+TE+ ++ N A +++ +G + Sbjct: 959 VSAHQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFETLRRLRAVGITIS 1018 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 +DDFGTG+SSLS L P D +K+D+ FV+++ ++ R I+ +A LNL+VIAEG Sbjct: 1019 IDDFGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMAHGLNLKVIAEG 1078 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPA 647 VE+ + FL + G +E QGFL ++P+ A Sbjct: 1079 VENQAQLDFLREAGCDEIQGFLVSRPLAA 1107 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 317 bits (812), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 193/559 (34%), Positives = 300/559 (53%), Gaps = 21/559 (3%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 + A V + AI+++D+ I N + TG +V+G++ L AS Sbjct: 318 MRLATLVFENSSEAIMVVDAESQILSVNPAFTEMTGYTAQEVVGKTPKIL--------AS 369 Query: 170 RRNNRVFFR-------SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 + +R F+ S ++ E+W G+ + I + +D Sbjct: 370 GKQDRKFYEEMWHLLDSNGKWQGEVWNRRKNGESYAEWLTIDTIYNEHGEVIRRVALFSD 429 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKV 280 IT+ ++ QE + AN D +TGLPNR + D ++ I AD N + V++LDLD FK+V Sbjct: 430 ITKNKQNQEVIWRQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLAVLFLDLDRFKEV 489 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILT 339 ND YGHL GDQLL++ + +L + +AR GGDEF+V+ S + ++ +A IL Sbjct: 490 NDTYGHLMGDQLLQESAHRLLHSVRECDTVARLGGDEFVVILSGLQDKDVVQDIAQSILK 549 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 + PF++ + S S+GI + PE G+ + ++AD AMY AK GR ++ FT M Sbjct: 550 KFDTPFQLDNDLTHVSVSIGITIYPEDGNAGEVLFKNADQAMYVAKNNGRNRYSYFTASM 609 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDF 458 + L +L AL Q ++YQP + G+V EAL+RWQ P RG+IPP +F Sbjct: 610 QAHAQNRMRLSNDLHLALPGQQFELYYQPIVELATGQVHKAEALLRWQHPTRGMIPPDNF 669 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTI-FTALKQV 516 I AEE+GLIV +G WV + RQV + + + ++++N S Q ++T A Sbjct: 670 IPLAEETGLIVDIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFHNETHGHEAWISF 729 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L + I VE+TE L+ DE + + F G QV LDDFGTGYSSLS L +F Sbjct: 730 LLMNDLPRQSIVVEITEGLLMHTDESISAQLLGFRDAGVQVALDDFGTGYSSLSYLKKFD 789 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 ID +K+D++FVR++ + +L AIV +A L+++VIAEG+E+ ++ L + G + Sbjct: 790 IDYLKIDRIFVRNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQRELLQQIGCDFG 849 Query: 637 QGFLFAKPMPAVAFERWYK 655 QG+LF+ P+PA AFE + + Sbjct: 850 QGYLFSPPLPAPAFEAYLR 868 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 191/547 (34%), Positives = 300/547 (54%), Gaps = 17/547 (3%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L A +V + A+++LD+ N C GL + G+ +L ++ + A Sbjct: 385 LQLAARVFECGNEAMMVLDADHRFITVNSACAQLAGLDAAALRGRPAAQL-LNDHDGAGW 443 Query: 170 RRNNRVFFRSGNAYEVELWI-----PTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 R R G A+ E+ + PT Q L + ++S G + + TD++ Sbjct: 444 ERIARELAEQG-AWSGEVTVRREDGPTLPAQ---LSVSAVLNSAGGATH--YVGALTDMS 497 Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVND 282 ++ + LR +A D++T LPNR+ + D AI A + ++++DLD FK VND Sbjct: 498 AHKQTEALLRHMAEYDALTDLPNRSLLHDRARAAIQGAARTDRLAALLFIDLDRFKNVND 557 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTRL 341 + GH GD LLR + + S L +ARPGGDEF++L + + A+ A A++I+ Sbjct: 558 SLGHSVGDALLRQAAKRLASLLHGGDTIARPGGDEFVMLLAEITDRAVAANRAAQIIDAF 617 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 PFR+ E+ + S+GIA++P+ G D+ ++R+AD AMY AKE GR + FT EM+ Sbjct: 618 STPFRVEHYELSVTPSIGIAIAPDDGVDADTLLRNADAAMYHAKESGRNTYRFFTDEMSL 677 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFIS 460 RV E L L+ LR+A+ D+ + YQP+ + EALVRW+ PERGLI P FI Sbjct: 678 RVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEALVRWRHPERGLIAPERFIP 737 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQE 519 AE++GLIV +GR V+ WR G+ ++ VAVN S Q+ + +VL E Sbjct: 738 LAEDTGLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASPVQIHHGNFAETVAEVLAE 797 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 +++ELTES L+ + + + +G ++ +DDFGTGYSSL+ L RF +D Sbjct: 798 TGLPARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDDFGTGYSSLAYLKRFQLDK 857 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ F+ D+ P ++ AI+ +A++L + VIAEGVE+A ++ FL G E QG+ Sbjct: 858 LKIDRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVETAAQERFLVDQGCAEGQGY 917 Query: 640 LFAKPMP 646 LF+ P+P Sbjct: 918 LFSPPVP 924 >UniRef50_Q1AVS2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVS2_RUBXD Length = 762 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 178/436 (40%), Positives = 260/436 (59%), Gaps = 8/436 (1%) Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA---DNNKVGVVYLDLDNFKK 279 ++E R QERL A D +TGL NR D + HA + A D ++ V+ LDLD FK Sbjct: 314 LSERERLQERLEQQALHDPLTGLANRALFSDRLAHAASRANPLDCGRLAVLMLDLDGFKS 373 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRIL 338 VND+ GH GD LL V+ I +C+ +AR GGDEF VL S A +A RIL Sbjct: 374 VNDSLGHEVGDALLVSVAGRIRACVRPSDTVARLGGDEFAVLIEEISDVGAAVRVAERIL 433 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 RL P+ +G + + SVG+A P ++ +++R AD AMY AKE G+G++ VF P Sbjct: 434 DRLGEPYSVGGVGRVAAASVGVAFGPAR--EAKSLLRDADAAMYVAKERGKGRYEVFEPR 491 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLD 457 M E L L+ LR ALE + +HYQP +++ GEV +EALVRW+ P RG + P + Sbjct: 492 MRNARAEKLRLEAELRAALERGEFAVHYQPIVSFATGEVVEVEALVRWERPGRGTVGPAE 551 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQV 516 F+S AEESGLIVP+GRWV+ + RQV +W+ G L +AVN+SA QL + +++ Sbjct: 552 FLSVAEESGLIVPIGRWVLREACRQVREWQKGGSRELALAVNLSASQLHHPRLVREVEEA 611 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L E + +E+TE +E+ A +++ S LG ++ LDDFG+GYS+LS L FP Sbjct: 612 LGLSGLEARHLKLEITEQAAVEDAREAARRLEELSALGVRIALDDFGSGYSALSYLRTFP 671 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 +D +K+D+ F+ I + + S+V A++A+A++LN+ V AEG E+ ++ A L G + Sbjct: 672 VDTLKIDRSFIEGIGRDLQATSIVGAVIALAKSLNMCVTAEGTETEEQLAHLRSLGCDLA 731 Query: 637 QGFLFAKPMPAVAFER 652 QG+ F++P ER Sbjct: 732 QGYYFSRPASPEEVER 747 >UniRef50_C6E7Z7 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=3 Tax=Geobacter RepID=C6E7Z7_GEOSM Length = 721 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 167/433 (38%), Positives = 265/433 (61%), Gaps = 5/433 (1%) Query: 227 RRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAY 284 R+ Q L+ LA+ D +T LPNR D + A+N A+ N+ + V+++DLD+FK +ND Sbjct: 262 RQRQAHLQQLAHYDPLTRLPNRTLFYDRLAQALNQAERNRQALSVIFIDLDHFKDINDTL 321 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM-ASRILTRLRL 343 GH GD LL DV+ + + + +AR GGDEF V N + A+ A+++ Sbjct: 322 GHRTGDLLLIDVANRLSTVVRSCDTVARLGGDEFTVFTQNVMNADNAAIVAAKLNALFAK 381 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 PF++G E+Y + S+G+ L P G ++ +AD AMY AK G+ + +F +MN+ Sbjct: 382 PFQLGESEIYVTASIGVTLFPNDGKTVDELLMNADIAMYHAKACGKNVYKMFDRKMNEHA 441 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYA 462 E + L ++LR ALE ++ V+HYQPK+ G V S+EALVRW P G++ P FI + Sbjct: 442 NERVTLLSDLRLALEREEFVLHYQPKVDLLTGNVTSVEALVRWMHPRLGMLAPDKFIRLS 501 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELN 521 EESG IV L WV+ Q KW+++ + ++RVAVN+S Q + A+ VL Sbjct: 502 EESGFIVELTDWVLRTACTQAKKWQEQNLGSVRVAVNLSPYHFQRQDVKEAIFSVLDATG 561 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 E +++E+TES L++NDE ++ ++ +LG + +DDFGTGYSSLS L RFPI+ +K Sbjct: 562 LEPALLEIEITESALMQNDEYTCALFRELRELGMTISVDDFGTGYSSLSYLHRFPINTLK 621 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ F+ ++ K Q++V AI+A+A++LN+Q++AEGVE+ + L G +E QGFL Sbjct: 622 IDRTFILNMMKSSEDQAIVTAIIAMAKSLNMQIVAEGVETVDQLEKLKDQGCHEIQGFLV 681 Query: 642 AKPMPAVAFERWY 654 ++P+ A + +++ Sbjct: 682 SRPVAAESVTQFF 694 >UniRef50_C6WYR4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WYR4_METML Length = 681 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 175/478 (36%), Positives = 282/478 (58%), Gaps = 13/478 (2%) Query: 174 RVFFRSG-NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQER 232 +V SG ++E ++ +P Q + + ++F+ + +E ++C DI+E +R Q++ Sbjct: 196 KVVVGSGITSFEYQMALP----QGVSNYESRFIRA----SEEQVLCIVRDISESKRTQQQ 247 Query: 233 LRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGD 290 L LA+ D++TGLPNR + + A HA+ ++ + V+++DLD FK +ND GH GD Sbjct: 248 LHFLAHYDTLTGLPNRLLFNESLHQAQTHANRTSDTIAVMFIDLDRFKNINDTLGHGIGD 307 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGL 349 +LL+ V I C+ +AR GGDEF V+ N +S +A +I+ LRLPF +G Sbjct: 308 KLLQQVGNRISLCIRESDTVARMGGDEFAVVLVNVREESDAAVVAEKIIDALRLPFMVGE 367 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWL 409 EV+ S+GI D ++ AD AMY AKE GR F ++ EM+ +E L + Sbjct: 368 HEVFVGASIGITFYRPGQDDRDVLLEKADVAMYHAKERGRNNFQFYSSEMDAVAYERLVM 427 Query: 410 DTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 + +LR AL+ + +++YQP+I G V ++E L+RWQ P+RGL+ P +FIS EESGLI Sbjct: 428 ENHLRHALDRKEFILYYQPQIAVDGGRVTAVETLLRWQHPDRGLVAPGEFISLLEESGLI 487 Query: 469 VPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPID 528 VP+G+WV+ +Q W D G +RVAVN+S RQ + + ++L E ++ Sbjct: 488 VPVGKWVLKTSCQQGRIWYDAGTPVRVAVNLSVRQFKHPGLVADVAEILAESGLPPELLE 547 Query: 529 VELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVR 588 +ELTES +++ ++ + Q LG + +DDFG+G SSL+ L FP+D +K+ Q FV Sbjct: 548 LELTESMFMDSATGDVNKLTQLKALGVSLAIDDFGSGASSLAYLKDFPVDTLKICQSFVL 607 Query: 589 DIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 ++ ++ A++ +AQA+N +AEGVE+ ++ FL + + QGFLF+KP+P Sbjct: 608 NLPHNNDDSAIASAVLGLAQAMNFTSVAEGVENDQQANFLRERRCDYFQGFLFSKPLP 665 >UniRef50_C6ML43 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Geobacter sp. M18 RepID=C6ML43_9DELT Length = 773 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 168/434 (38%), Positives = 267/434 (61%), Gaps = 5/434 (1%) Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKV 280 + E +R +E+L A D +T LPNRN + D I A+ A ++ + V+++DLD FK V Sbjct: 196 MAEHKRYEEQLAYQATHDPLTALPNRNLLADRISQALAWAQRHRRWIAVLFVDLDFFKFV 255 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTR 340 ND+ GH GDQLL+ V+ + + LA GGD+F+V+ ++ + A ++ Sbjct: 256 NDSLGHGKGDQLLKMVAERLSERVRQVDTLAHQGGDKFVVVLTDLRGNEEADRAVHVIRE 315 Query: 341 -LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 + LPF + E+ SCS+GI + P+ G D+ ++++A+ AMY AKE GR F +T E+ Sbjct: 316 AISLPFLMDGQELVISCSIGITVYPKDGEDAQTLVKNAEVAMYRAKEQGRNCFRYYTREL 375 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDF 458 N+RV + ++ +LRKALEN++ + YQP+ G + +E L+RW++ E G++ P F Sbjct: 376 NERVASRMSMEKHLRKALENEEFELWYQPQADLNTGRLSGMEGLIRWRNAELGMVQPGSF 435 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVL 517 I AEE+GLIV +G WV+ Q +W+D G++ L VAVN+S RQ D+ + + VL Sbjct: 436 IPLAEETGLIVQIGEWVVRTACLQNRRWQDAGLSPLTVAVNLSPRQFRDRELTGVIAGVL 495 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 +E + + +E+ ES ++ + E A +++ + LG ++ +DDFGTGYSSLS L RFP Sbjct: 496 RETGLDPRYLGLEIVESMVMHDVESAAAMLNELKALGVKLSMDDFGTGYSSLSYLKRFPF 555 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 +K+D FVRDI P S ++ ++I+++A LNL V+AEGVE+ + FL +G NE Q Sbjct: 556 AKLKIDLSFVRDIMTDPGSAAIAKSIISMAHNLNLSVVAEGVETEGQLEFLRAHGCNEIQ 615 Query: 638 GFLFAKPMPAVAFE 651 G+ ++P+PA FE Sbjct: 616 GYYLSRPLPAAEFE 629 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 194/563 (34%), Positives = 303/563 (53%), Gaps = 14/563 (2%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 VA+ L A +V IV+ ++ G I++ N TG + +G + ++ Sbjct: 510 VAKKAEEKLLLAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGYSADEAVGSNP-RILK 568 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE----IFLI 217 S R A + + E+W G+ +++ + KNE + Sbjct: 569 SDRHAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESY----PEWLTISAVKNEAGQTTNYV 624 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLD 275 DITE +R Q+ L A D++TG+PNR + D + A+ K+ +++ DLD Sbjct: 625 SIFHDITELKRQQDALEYQAQHDALTGMPNRILLGDRLRMALAQLARSGGKLALLFFDLD 684 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMA 334 NFK +ND GH GD+LL D+S + L LAR GGDEFL+L S A +A Sbjct: 685 NFKTINDGLGHGVGDELLVDLSRRLERLLRSGDTLARLGGDEFLILLPEIESVDAASHIA 744 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 +R+L L+ PF G +E + + S+G+ ++P+ G+++ +I++AD AMY AK GR + Sbjct: 745 TRMLDALKAPFHHGDVEYFVTASIGLTIAPDDGNEAPKLIKNADMAMYRAKSMGRNNYQY 804 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLI 453 FTPEM+ + ++ LRKA+E + + YQP + + G + EAL+RW+ E LI Sbjct: 805 FTPEMDVAAHRRISMEYKLRKAIEAQEFELFYQPLVHIQSGHILGAEALIRWRC-EGKLI 863 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTAL 513 P +FI AEES LI+PLG WV+ Q W+D G +L ++VNIS+RQ + + L Sbjct: 864 SPAEFIPLAEESALILPLGDWVLRTAAHQAKLWQDAGHDLTMSVNISSRQFSGADLAVTL 923 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 ++VL + + E+TES L+ + A + + + G LDDFGTGYSSLS L Sbjct: 924 REVLLDTELRPGRLYFEITESMLMGDVSKAETTLLNLREAGGTFFLDDFGTGYSSLSYLK 983 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 R PID +K+D+ F++DI S+++V AIV++A+ LNL+++AEGVE+ + L G Sbjct: 984 RLPIDGLKIDRSFIKDITDDSDSRAIVAAIVSMARTLNLRIVAEGVETQAQRGLLASMGP 1043 Query: 634 NERQGFLFAKPMPAVAFERWYKR 656 QG+L ++P+PA FE R Sbjct: 1044 IVLQGYLASRPVPAQDFEALLSR 1066 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 199/549 (36%), Positives = 301/549 (54%), Gaps = 10/549 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L ++ + ++I+I + G I+ N E TG +VIG++ + S + + Sbjct: 359 LKLLQEATENSPASILITSAEGIIEYVNPAFELMTGYGADEVIGKNP-RFLKSGLMSPSF 417 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF--VHSGSGKNEIFLICSGTDITEER 227 ++ +G + EL+ G+ LF R V +G+ I + DITE++ Sbjct: 418 YQDLWETITAGETWRGELYNRRKTGE-LFWDRTSISPVKDLAGQI-IHFVAVKEDITEQK 475 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHA--INHADNNKVGVVYLDLDNFKKVNDAYG 285 R +E L AN DS+T LPNR+ D + A ++ N+ V V+ LDLD FK +ND G Sbjct: 476 RNRELLDHQANYDSLTDLPNRSLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTLG 535 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLP 344 H +GD LL++++ + L + ++R GGDEFL++ ++ LE ++ ++L + P Sbjct: 536 HSYGDCLLQEIAKRLRYHLPREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQP 595 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 I E+ + S+G+A P G ++R+ADTAMY+AK G F +F P MN Sbjct: 596 ITIEAEELVITASIGVACYPNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAH 655 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAE 463 + L+T+LR ALE QL + YQP I+ + V LEAL RW PE G IPP FI AE Sbjct: 656 ARIQLETHLRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAE 715 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIFTALKQVLQELNF 522 E+GLI+PLG VI + VA W+ K VAVN+S RQL ++LQ NF Sbjct: 716 ETGLIIPLGYRVIEQACQDVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHNF 775 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 + +E+TE L++N ++ + G + LDDFGTGYS+LS L R+P ++K+ Sbjct: 776 RPNYLKLEVTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKV 835 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 DQ F+RDI S +LV+ IVA+A L +Q +AEGVE+A++ FL G QG+ F+ Sbjct: 836 DQSFLRDIPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFS 895 Query: 643 KPMPAVAFE 651 +P+PAV + Sbjct: 896 RPLPAVEID 904 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77334 Protein gmr n=91 Tax=Proteobacteria RepID=GMR_ECOLI 943 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 902 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 897 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 896 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 892 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 887 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 884 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 881 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 881 0.0 UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 878 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 877 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 876 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 875 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 873 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 872 0.0 UniRef50_B4T6U5 Cyclic diguanylate phosphodiesterase (EAL) domai... 868 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 867 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 866 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 866 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 865 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 864 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 863 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 863 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 862 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 862 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 861 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 861 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 859 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 859 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 858 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 856 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 853 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 853 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 852 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 852 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 852 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 850 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 849 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 849 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 848 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 847 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 847 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 846 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 846 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 846 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 844 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 844 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 842 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 841 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 840 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 839 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 839 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 839 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 839 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 838 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 838 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 838 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 838 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 838 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 837 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 837 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 836 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 836 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 834 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 834 0.0 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 834 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 833 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 833 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 833 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 832 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 832 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 831 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 831 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 831 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 829 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 829 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 829 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 829 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 828 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 828 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 827 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 827 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 826 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 826 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 826 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 825 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 824 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 824 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 824 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 824 0.0 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 824 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 823 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 823 0.0 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 822 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 822 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 821 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 821 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 821 0.0 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 820 0.0 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 820 0.0 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 819 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 819 0.0 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 818 0.0 UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 818 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 817 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 816 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 816 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 815 0.0 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 814 0.0 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 814 0.0 UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 813 0.0 UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/P... 811 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 810 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 810 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 809 0.0 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 809 0.0 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 809 0.0 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 808 0.0 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 808 0.0 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 807 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 807 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 807 0.0 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 807 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 806 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 806 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 805 0.0 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 805 0.0 UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/P... 805 0.0 UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 805 0.0 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 805 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 804 0.0 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 804 0.0 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 804 0.0 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 804 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 802 0.0 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 802 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 802 0.0 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 801 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 801 0.0 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 799 0.0 UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica ... 799 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 797 0.0 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 797 0.0 UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 797 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 797 0.0 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 797 0.0 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 796 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 796 0.0 UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/P... 795 0.0 UniRef50_Q5NZD7 Putative signal transducer protein with histidin... 795 0.0 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 794 0.0 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 793 0.0 UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magneto... 792 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 792 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 791 0.0 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 791 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 791 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 790 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 790 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 789 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 789 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 789 0.0 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 788 0.0 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 788 0.0 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 788 0.0 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 787 0.0 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 787 0.0 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 786 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 786 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 786 0.0 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 786 0.0 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 786 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 785 0.0 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 784 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 784 0.0 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 784 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 784 0.0 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 784 0.0 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 784 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 784 0.0 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 783 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 783 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 782 0.0 UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 782 0.0 UniRef50_C1DD31 Predicted signal transduction protein containing... 782 0.0 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 781 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 781 0.0 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 781 0.0 UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacteriu... 780 0.0 UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/P... 780 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 780 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 780 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 780 0.0 UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 779 0.0 UniRef50_B7HSZ4 Response regulator receiver modulated diguanylat... 778 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 778 0.0 UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/P... 777 0.0 UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 777 0.0 UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/P... 777 0.0 UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=M... 777 0.0 UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/P... 777 0.0 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 776 0.0 UniRef50_A1ASK8 Response regulator receiver modulated diguanylat... 776 0.0 UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ge... 776 0.0 UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/P... 775 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 775 0.0 UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 775 0.0 UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobact... 775 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 774 0.0 UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotole... 772 0.0 UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/P... 770 0.0 UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (... 770 0.0 UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/P... 769 0.0 UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 769 0.0 UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum a... 768 0.0 UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsul... 766 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 765 0.0 UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=... 764 0.0 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 764 0.0 Sequences not found previously or not previously below threshold: UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 835 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 834 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 825 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 821 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 819 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 814 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 812 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 812 0.0 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 810 0.0 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 809 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 808 0.0 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 801 0.0 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 800 0.0 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 796 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 795 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 792 0.0 UniRef50_P72843 Regulatory components of sensory transduction sy... 784 0.0 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 782 0.0 UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/P... 778 0.0 UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 777 0.0 UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/P... 777 0.0 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 776 0.0 UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax... 775 0.0 UniRef50_Q2W7U0 Predicted signal transduction protein containing... 775 0.0 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 774 0.0 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 772 0.0 UniRef50_A3Y9K4 Putative uncharacterized protein n=1 Tax=Marinom... 770 0.0 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 769 0.0 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 766 0.0 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 765 0.0 UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/P... 764 0.0 >UniRef50_P77334 Protein gmr n=91 Tax=Proteobacteria RepID=GMR_ECOLI Length = 661 Score = 943 bits (2439), Expect = 0.0, Method: Composition-based stats. Identities = 661/661 (100%), Positives = 661/661 (100%) Query: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI 60 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI Sbjct: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI 60 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA Sbjct: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG Sbjct: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD Sbjct: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 Query: 241 SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI Sbjct: 241 SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI Sbjct: 301 LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND Sbjct: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 Query: 421 QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV Sbjct: 421 QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 Query: 481 RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND Sbjct: 481 RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV Sbjct: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR Sbjct: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 Query: 661 A 661 A Sbjct: 661 A 661 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 902 bits (2332), Expect = 0.0, Method: Composition-based stats. Identities = 211/571 (36%), Positives = 326/571 (57%), Gaps = 7/571 (1%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH 149 A D A ++ L A QV IVI D + N+ + TG + Sbjct: 543 AELVGVMLDITA-SKAAEADLRLARQVFDNTAEGIVITDPAFRVLEVNQAYQQITGYDKE 601 Query: 150 DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS 209 ++IG+ + E AA R + E+W G+ + + + + Sbjct: 602 EIIGKLPSVMQAGLHE-AAYYEGIWQTLRREGQWVGEIWNRRKSGESYPEWLSISQVADA 660 Query: 210 GKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--V 267 + + TDIT+ + ++ERL+ LAN D++T LPNR +Q+ ID A+ A NK + Sbjct: 661 KGSVQNYVAVFTDITQRKLSEERLQFLANHDALTHLPNRALLQERIDQALFRAQRNKTAI 720 Query: 268 GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ 327 V+++DLD FK +ND GH GD LL++ + + CL +AR GGDEF+VL + Sbjct: 721 AVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECLRETDTVARQGGDEFVVLVEDCGD 780 Query: 328 SA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKE 386 + L +A +I+ L PF + E++ S S+GI++ P+ G D+ ++++HAD AMY AKE Sbjct: 781 TDYLNTIARKIMATLAQPFILVGRELFISASIGISVYPDDGLDTASLLKHADAAMYRAKE 840 Query: 387 GGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRW 445 G+ F + E N E L L+ NLR+A+E ++ V+HYQPK+ R + + EA+VRW Sbjct: 841 SGKNTFRFYAAEANTNSVELLTLENNLRRAVERNEFVLHYQPKVDLRSQKIIGAEAVVRW 900 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQL 504 Q PE G++ P+ FI AEE+GLI+ +G W++ + RQ +W+ G N+RVAVN+SARQ Sbjct: 901 QHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQAVEWQQLTGQNVRVAVNLSARQF 960 Query: 505 ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGT 564 D+T+ + L E +++E+TES ++ N E A V+Q F LGA V +DDFGT Sbjct: 961 RDETLRQTIADALTESGLTPDCLELEITESMIMHNAERAREVLQHFHDLGAHVLIDDFGT 1020 Query: 565 GYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE 624 GYSS L FPID++K+D+ FVRDI ++ +AI+A+A +L ++V+AEGVE+ ++ Sbjct: 1021 GYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQAIIAMAHSLQIKVVAEGVETQEQ 1080 Query: 625 DAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 AFL K G ++ QGFLF++P+ + F R K Sbjct: 1081 LAFLKKQGCDQIQGFLFSEPLHSHDFVRMLK 1111 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 5/114 (4%) Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDV-IGQSVFKLFMSRREAAASRRNNRVFFRS 179 + + I+ RG I N G D+ +G F L S + Sbjct: 324 NEGVAII-HRGKIVYGNDALWRIGGYSPGDIPLGSDFFSLIHPSDRKRVSEIYQQRLQDM 382 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 E G+ + + + + + LI DI+ ++A+ L Sbjct: 383 DVPTRYEALGLGKNGRAIHIEIAAAQYRDDSQRIVTLII---DISSRKKAEAEL 433 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 897 bits (2319), Expect = 0.0, Method: Composition-based stats. Identities = 213/607 (35%), Positives = 335/607 (55%), Gaps = 15/607 (2%) Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 L +L +L H + ++ E AG SA A RD L ++ + + + Sbjct: 355 LATALNCMADELQGHRLLQEERTAELAGANSALETEIAEHRDAEEALRQRQRAIDSSSNG 414 Query: 124 IVILDS---RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF--FR 178 I+I D+ I N E TG +V+G++ L RE R Sbjct: 415 IMITDALELDHPIIYVNPAFERITGYAASEVLGRNPRLLCSGDREQLGLEVIRVALCELR 474 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 G+A EL G + + + + DITE +R +E+L +N Sbjct: 475 EGHA---ELRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDITERKRYEEQLEYQSN 531 Query: 239 TDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDV 296 D +TGLPNRN + D I A+ +A+ + V ++DLD+FK +ND+ GH GD+LL+ Sbjct: 532 HDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIA 591 Query: 297 SLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTS 355 + + C+ +AR GGDEF+++ S+ + +A +I + P++IG E+ S Sbjct: 592 ARRLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVS 651 Query: 356 CSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRK 415 CS GI+L P+ GSD+ ++++AD AMY AK+ GR F +T ++N V L ++ LR+ Sbjct: 652 CSTGISLYPKDGSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRR 711 Query: 416 ALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRW 474 ALE D+ ++HYQPK+ G + +EALVRWQSPE G I P FI AEE+GLIV +G W Sbjct: 712 ALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEW 771 Query: 475 VILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTE 533 V+ Q W+D G+ + VAVN+S RQ + + + ++ +E I++E+ E Sbjct: 772 VLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVE 831 Query: 534 SCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQ 593 S L+++ + A++++ +LG Q+ +DDFGTGYSSLS L RFP D +K+DQ FVRDI + Sbjct: 832 SLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRD 891 Query: 594 PVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 P S ++VR ++++A LNL+V+AEG+E+ + +L +E QGF F++P+PA FE+ Sbjct: 892 PGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQM 951 Query: 654 YK--RYL 658 + R+L Sbjct: 952 LRDQRHL 958 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 896 bits (2317), Expect = 0.0, Method: Composition-based stats. Identities = 210/617 (34%), Positives = 327/617 (52%), Gaps = 16/617 (2%) Query: 50 QAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDT-------PAV 102 A RI + S + + + + ++ + E A ++A HD Sbjct: 320 MAGRIARPISLISQAADKVAGGDLEYELPA---RLGEGEVAHLSTAIHDMVVNLTHEIKQ 376 Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 ++ GL + +V AI+I D+ NI N+ TG +V+GQ KL S Sbjct: 377 RKEAEQGLRLSAKVFESNTEAIMITDAEQNIVMVNQAFTQITGYGADEVLGQRP-KLLSS 435 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 R R+ + + E+W G+ + + D Sbjct: 436 GRHGPEFYEAFWHALRANDLWRGEIWNKRKNGEIFPEWVTISALRDETSQISHYVAVFLD 495 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKV 280 ITE ++ +ER+ LAN D +TGLPNR + D I+ A + A N KV V+++DLD FK + Sbjct: 496 ITERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFSSAQRNNFKVAVLFIDLDYFKNI 555 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILT 339 ND+ GH GD LL+ V+ + +CL +AR GGDEF+ L S + +A +++ Sbjct: 556 NDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEFVALLSELDSSEEVIFVAEKMIE 615 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 L F +G ++ + S+GI + P+ G S ++R+AD AMY AK+ GR F ++P+M Sbjct: 616 SLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNADLAMYQAKDDGRNNFKFYSPDM 675 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDF 458 N++ E L L+T LR A+ QL ++YQPK++ G++ +EAL+RWQ PE G I P F Sbjct: 676 NRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKMTGMEALLRWQHPELGFISPAVF 735 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVL 517 I AEE+GLI +G WV+ Q W+ +G ++ +AVN+SARQL + +L Sbjct: 736 IPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPIAVNLSARQLKQDNFAARVVTIL 795 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 +E + + +E+TES L+ E L +++Q G ++ LDDFGTGYSSLS+L P+ Sbjct: 796 REAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGVRLALDDFGTGYSSLSRLKNLPL 855 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D++K+DQ FVRDI P S+V A +A ALNL+V AEGVE+ ++ F+ E Q Sbjct: 856 DSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVTAEGVETQEQLDFIRMLNCEEYQ 915 Query: 638 GFLFAKPMPAVAFERWY 654 G+LF++P+PA +++ Sbjct: 916 GYLFSRPIPASEVVKYF 932 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 892 bits (2307), Expect = 0.0, Method: Composition-based stats. Identities = 190/574 (33%), Positives = 310/574 (54%), Gaps = 11/574 (1%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 A + A L+ A +V+ + I+I+DS I+ N TG ++IG+ Sbjct: 301 ALKERDAALLRSRKDLNLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGK 360 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 + L S ++ + + ++ E+W G+ + V + Sbjct: 361 NPNVL-KSGHHDETFYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDIT 419 Query: 215 FLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYL 272 +DITE ++ +ER++ LA D +T LPNR D + AI +A + ++ +++L Sbjct: 420 QYAAIFSDITERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFL 479 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALE 331 DLD FK++ND+ GH GDQ+L + + I C+ +AR GGDEF VL + Sbjct: 480 DLDLFKRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVA 539 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A R++ ++ PF + E+Y + S+GIA+ PE G+ A+I++ADTAMY AK+ GR Sbjct: 540 KLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNS 599 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPER 450 + ++T MN R FE L ++++LR AL ++ + YQ K+ G + +EALVRW PE Sbjct: 600 YQLYTAAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEM 659 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTI 509 GL+ P+DFI AE G+I +G WV+ RQ W D G+ +R+AVN+SA+Q + + Sbjct: 660 GLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETDV 719 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 + + L+E +++ELTE+ L++ + ++V++ +G ++ +DDFGTGYSSL Sbjct: 720 PEVVARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSL 779 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQ-----PVSQSLVRAIVAVAQALNLQVIAEGVESAKE 624 S L R PIDA+K+D+ FV DI +V I+ +A L L+ IAEGVE+ ++ Sbjct: 780 SYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQ 839 Query: 625 DAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 FL G +E QG+L ++P+ + R L Sbjct: 840 AEFLRSKGCDEVQGYLISRPVSGEDLISLFDRNL 873 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 887 bits (2294), Expect = 0.0, Method: Composition-based stats. Identities = 209/568 (36%), Positives = 310/568 (54%), Gaps = 8/568 (1%) Query: 95 AWHDTPAVAR-DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 A AV R L A V ++I D G I NR + +G E +V+G Sbjct: 496 ACIAGLAVTRVRADTRLRQAATVFESTREGVIITDLEGRILDVNRAFTEISGYSEPEVLG 555 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 ++ L S R+ A + ++ ++ E+W G+ + S Sbjct: 556 RNPS-LLRSNRQDHAFYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTINTVADSQGRP 614 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVY 271 + TDI++ ++++ RL L + D +T LPNR +Q ++HA+ AD +V V++ Sbjct: 615 SHYVGVMTDISQLKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADRQGGRVAVLF 674 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SAL 330 +DLD FK VND+ GH GD LL ++ + + D LAR GGDEFLVL N + Sbjct: 675 VDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLLENLQRPEDA 734 Query: 331 EAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 A+A +L+ L+ PF + E+Y S+GI+L P+ G T +I+HAD AMY AKE GR Sbjct: 735 AAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVAMYQAKEEGR 794 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSP 448 + +TP + Q E L L+ L +AL +++ V+HYQ +I R G + EALVRW S Sbjct: 795 NTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGCEALVRWHSA 854 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQ 507 GL+ P FI AEE+GLIVPLG WV+ WR +G+ +L VAVN+S RQL Sbjct: 855 TEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVNLSGRQLRSP 914 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 + + +VL+E + +ELTES +++ E AL ++ LG ++ +DDFGTGYS Sbjct: 915 DLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLSIDDFGTGYS 974 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SL+ L R PID +K+D+ FVRDI + + I+A+A+ L L VIAEGVE+ ++ F Sbjct: 975 SLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEGVETPEQCDF 1034 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYK 655 L + G QG+LF +P+PA AF + + Sbjct: 1035 LIRQGCTAGQGYLFGRPLPAEAFAQVMR 1062 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 884 bits (2287), Expect = 0.0, Method: Composition-based stats. Identities = 191/571 (33%), Positives = 300/571 (52%), Gaps = 8/571 (1%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 + W D + R L + AI++ D I N TG +V G Sbjct: 830 TLWRDI-SERRVTETRLRLLAAAFEHSAEAIMVSDRDNRILEVNDAFCRLTGYAADEVRG 888 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 +L S R +A R S ++ E+W G + + G+ N Sbjct: 889 SDP-RLLSSGRTSAEEYRTMWQAINSTGHWQGEVWDRRKDGSYYPKWLSISTIRGAEGNT 947 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN----NKVGV 269 + I S DI+E + A+E++ LA+ D++T LPNR+ +Q +D A+ A V V Sbjct: 948 EYYIGSFVDISERKAAEEKISHLAHFDTLTDLPNRSNLQGRLDQALASARREGHGRSVAV 1007 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA 329 ++LDLD FK +ND GH GD LL +V+ + S + V+AR GGDEF+V+ + A Sbjct: 1008 MFLDLDRFKNINDTLGHHVGDALLLEVAARLRSSVRDSDVVARLGGDEFVVVLTGADALA 1067 Query: 330 LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 E +A +IL L ++I ++++ S+GIA+ P G ++++AD AMY AK GR Sbjct: 1068 AERVAGKILKALSRAYQIEGHALHSTSSIGIAVFPADGESVEVLMQNADAAMYHAKSAGR 1127 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPE 449 FT MN+ + L+ +L AL+ Q V+HYQP++ + V ++EAL+RWQ P Sbjct: 1128 NNVQFFTASMNEAASDRRQLEEDLHLALQQKQFVLHYQPQVDAQRRVFAVEALLRWQHPH 1187 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQ 507 GL+PP F+ AE++GLIVP+G+WV+ Q+ W + L+VAVN+SARQ Sbjct: 1188 HGLVPPARFVPLAEDTGLIVPIGQWVLETACAQIKAWSVDARTRKLQVAVNVSARQFRQP 1247 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 L+Q + + +ELTES +++N + + LG +DDFGTGYS Sbjct: 1248 DFVELLRQAIDNSGANPARLKLELTESLVLDNVADTIDKMNAIKLLGVTFSMDDFGTGYS 1307 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SLS L R P+D +K+D+ FV + + + + IV + ++L L+V+AEGVE+ + F Sbjct: 1308 SLSYLTRLPLDQLKIDRAFVCRLPENRSDAVIAQTIVTMGRSLGLKVVAEGVETEAQRQF 1367 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 L +G + QGFLF++P+ AFE + + ++ Sbjct: 1368 LDSHGCDGYQGFLFSRPLAVDAFEDFLQGFV 1398 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 78/244 (31%), Gaps = 27/244 (11%) Query: 16 SHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDL 75 + P + +SS V S +++ + AR + + LT+ D Sbjct: 507 GYAPGELIGKSSQVFYPS----------IEVFEKIGARAYAVVAENRNFSGELTLRRKDG 556 Query: 76 SVH---LVGRKINKRE-WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 S+ L GR I+ + AG+ + D + + V ++ AIVI + Sbjct: 557 SLFWGALTGRAIDPSQPHAGSIWVFADISERREAEEESRNLLQAV-EQSPVAIVITNRNA 615 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 I+ N TG + IGQ+ L + R + G + Sbjct: 616 EIEYVNPSFTRVTGYSRLEAIGQNPRILQSGEAPSDTYRSLWQTLL-EGKVWTGLFHNRR 674 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR--ILANTDSITGLPNRN 249 G+ + + G + D+TE RA + L+ A R Sbjct: 675 KNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADKLLQESEEAF---------RR 725 Query: 250 AMQD 253 +D Sbjct: 726 LFED 729 Score = 71.5 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 53/171 (30%), Gaps = 15/171 (8%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 + +RE A + + R S L +++ A I + G++ N Sbjct: 320 RSEQRE-AKVVADLVERDRQLRANSERLEIFQRLAENAGQGIGMAQLDGSLLYANPALRR 378 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 + + FK F SR EA + + E+ + + G+ Sbjct: 379 MIDMPQGAACSDYSFKQFYSREEANRLQHAVLPMLLPAGQWTGEIELRSLSGRTTPAIHT 438 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 FV + + DI+E + +ER NR + + Sbjct: 439 LFVVHNTADEPPVIATVLADISERKEMEER--------------NRQLLAE 475 Score = 61.8 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 39/135 (28%), Gaps = 2/135 (1%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 A + + + L+ E ++ A IV L + + NR E+ G Sbjct: 452 IATVLADISERKEMEERNRQLLAEMETLLGNALVGIVHL-RQRCVVSCNRRLEEIFGYAP 510 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 ++IG+S + S + EL + G + Sbjct: 511 GELIGKSSQVFYPSIEVFEKIGARAYAVVAENRNFSGELTLRRKDGSLFWGALTGRAIDP 570 Query: 209 SGKNEIFLICSGTDI 223 S + I DI Sbjct: 571 S-QPHAGSIWVFADI 584 Score = 61.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 51/152 (33%), Gaps = 11/152 (7%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL-KEH 149 + + + ++ ++ +A +++L G+ NR + G + Sbjct: 704 EDVTERLRADKLLQESEEAFR---RLFEDAKDPLLLL-KDGSFIDCNRATLELLGYGSKA 759 Query: 150 DVIGQSVFKLFMSRREAAAS----RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 ++G+ + +R+ + + E G + + Sbjct: 760 QLLGRDAADISPARQPDGQASGEKAAALIAAALRIGYHRFEWTHQRADGSPVPVEVTLTP 819 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + G+ + + DI+E R + RLR+LA Sbjct: 820 ITLRGEVILHTL--WRDISERRVTETRLRLLA 849 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 881 bits (2279), Expect = 0.0, Method: Composition-based stats. Identities = 185/566 (32%), Positives = 297/566 (52%), Gaps = 6/566 (1%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 A + L A++V I+I D+ G I+ N TG + +V+G Sbjct: 265 YALKERDEALNLSQQNLRLADKVFEATLEGIIITDAEGIIETVNPAFTRITGWRREEVVG 324 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 ++ L S ++ R+ R ++ E+ G+ G Sbjct: 325 KNPRILSSS-QQPPEFYRHLWQSLREHGFWQGEVINRRKDGKFYTEHLTITGIRGPDGTF 383 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVY 271 +DIT+ + +ERL LAN D +T LPNR + + + A+ A +V +++ Sbjct: 384 THYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGAALTRAHRQGKRVALMF 443 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SAL 330 LDLD FK +ND GH GD+LL+ V+ + L +AR GGDEF ++ + + Sbjct: 444 LDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGGDEFNIVLEDIRDLRGV 503 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 A +++ R++ + +VY + SVGIA+ P+ GS + +ADTAMY AKE G+ Sbjct: 504 AQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLRMNADTAMYRAKERGKN 563 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPE 449 F FT +MN L L++NL +AL + +H+QPK+ G + +EAL+RW+S E Sbjct: 564 NFQFFTADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLAHGHIYGMEALLRWRSHE 623 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQT 508 G + P DFI AEES LI +G WV+ RQ W + G+ VAVN+S++Q+ Sbjct: 624 LGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLPGTVAVNLSSKQMTQGD 683 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 I ++++L+ N +++E+TES ++N + ++ LG ++ +DDFGTGYSS Sbjct: 684 IVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKALGVRIAIDDFGTGYSS 743 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 LS L + PID +K+D+ FV D+H+ ++ AI+++ Q+LNLQ +AEGVE + FL Sbjct: 744 LSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNLQPVAEGVEREEHRQFL 803 Query: 629 TKNGINERQGFLFAKPMPAVAFERWY 654 +G QG+LF++P+PA E+ Sbjct: 804 LDHGCQYGQGYLFSRPVPAATMEQLL 829 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 881 bits (2277), Expect = 0.0, Method: Composition-based stats. Identities = 179/583 (30%), Positives = 317/583 (54%), Gaps = 9/583 (1%) Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCE 141 + W G + + A +V ++ I+I DS I N Sbjct: 889 QPDGSILWHGFITDISQHKKTEAQIE----LASKVFEQSREGIMITDSNQKILMVNEAFS 944 Query: 142 DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 + +G + +G++ L R + +N + ++ E+W G+ + Sbjct: 945 EISGYSVEETLGKTPRMLASGRH-SREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWL 1003 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH 261 + + N + DI++ + ++E+++ LA+ D +TGL NR + D ++H+I+ Sbjct: 1004 SISRGLDTSGNVTEYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSIST 1063 Query: 262 ADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL 319 AD N + ++++DLD+FK VND GH GDQLL +V IL L + +AR GGDEF+ Sbjct: 1064 ADRNNTPLALLFIDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFI 1123 Query: 320 VLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADT 379 V+ +T ++ +A +IL + + +++ + S+GIA+ P+ G D+ +++++ADT Sbjct: 1124 VVLPDTGENGAVHVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADT 1183 Query: 380 AMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRS 438 AMY AK GR + FT EM + +++ LR AL + Q ++YQP+ G + Sbjct: 1184 AMYQAKNDGRNVYRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIG 1243 Query: 439 LEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAV 497 +EAL+RW PE G + P +FI AE+SG I+ +G WV+ +RQ+ W + G ++VAV Sbjct: 1244 VEALIRWNHPEMGPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAV 1303 Query: 498 NISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQV 557 N+SA Q + + + ++L+E +++ELTES + N E + ++ + G ++ Sbjct: 1304 NLSAVQFRYEDLPKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKM 1363 Query: 558 HLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAE 617 +DDFGTGYSSLS L RF + +K+DQ F+RD+ +S++ AI+++++AL L+ IAE Sbjct: 1364 SIDDFGTGYSSLSYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAE 1423 Query: 618 GVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 GVE+ + FL + +E QGF ++K + AF+ +Y++ ++ Sbjct: 1424 GVETQAQLDFLQEKQCDEIQGFYYSKALTPEAFDAFYEKQSQK 1466 Score = 82.2 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 3/133 (2%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 ++ H V + + D+ G N E + G KE D+IG++ + F+ + Sbjct: 473 NIEHQNQLNALV-HTIPDLVWLKDTEGLYLACNPSFERFFGAKEADIIGKTDYD-FVDKA 530 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIP-TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 A R N+ + + E E W+ + G R K I ++ DI Sbjct: 531 LADFFRENDCNAMAAEESIENEEWLTFSENGYRGLFSTIKTPMKNEEGQVIGVVGVARDI 590 Query: 224 TEERRAQERLRIL 236 ++ + + +L L Sbjct: 591 SKRKEDEAQLERL 603 Score = 51.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 6/130 (4%) Query: 113 AEQVVSEAHS----AIVILDSRG-NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAA 167 AE+V+ + + + ILD++ RFN D+ +S ++ + A Sbjct: 348 AEKVLQKFYELPFIGMAILDAQHDKWIRFNDRLPKILRYSSQDLAQKSFNEIIHPKDLAE 407 Query: 168 ASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEER 227 + + + + EL + +F N G + + + D+TE + Sbjct: 408 VNAQLTDIESGKSEGFTTELHLLASDDSIVFGTINVKCVRGENGRVQYYLMTVQDVTELK 467 Query: 228 R-AQERLRIL 236 A+ + Sbjct: 468 HLAELNIEHQ 477 >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 878 bits (2269), Expect = 0.0, Method: Composition-based stats. Identities = 213/645 (33%), Positives = 331/645 (51%), Gaps = 30/645 (4%) Query: 19 PYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVH 78 P R E + D E R ++ + I SL + D S Sbjct: 260 PAERAAEHRKLRELVLQGKRITD------VELRRRRKDGSPIDVSLSAAPICDGS----- 308 Query: 79 LVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS---RGNIQR 135 G + + SA + L ++ + + + I I D+ I Sbjct: 309 --GTPLGVITIISDISA-------RKRNEQELVLLKRAMESSINGITITDATHPDNPIIY 359 Query: 136 FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQ 195 N E TG +VI ++ L R+ A ++ + F V L G Sbjct: 360 VNPAFERITGYGVDEVIDKNPRFLRGDDRDQAELKKLVQAFKEEREGCFV-LRNYRKDGS 418 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLI 255 + I DITE RR +E+L A D +TGLPNRN +QD + Sbjct: 419 PFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYEEQLVYQATHDPLTGLPNRNLLQDRL 478 Query: 256 DHAINH---ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLAR 312 A+ N + V++LDLDNFKKVND GH GD LL+ V+ + +CL +AR Sbjct: 479 GQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRLKNCLRGGDTVAR 538 Query: 313 PGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDST 371 GGDE++++ N + + +A +++ P + E+Y + S+GIAL P G Sbjct: 539 LGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIGIALFPTDGETVD 598 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 A++++AD AMY AKE G+ + ++ EMN RVFE L L+T+L +A++N + ++HYQP++ Sbjct: 599 ALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKNQEFLLHYQPRVD 658 Query: 432 WR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 R G + +EALVRW PE GL+ P FI AEE+GLIVP+G WV+ Q W+D G Sbjct: 659 LRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRTACAQNKAWQDAG 718 Query: 491 IN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 + LR+AVN+SARQ + + ++++L E +++ELTES +++ E + +++++ Sbjct: 719 LPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVMQEAEKSAAILRE 778 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 + G +V +DDFGTGYSSLS L RFPI +K+DQ F+RD+ + P +LV+ I+ +A Sbjct: 779 LTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDATLVKTIITMAHG 838 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 L ++ IAEGVE A++ FL ++ E QG+ F++P+ A R Sbjct: 839 LGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEELGRLL 883 Score = 96.5 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 81/232 (34%), Gaps = 28/232 (12%) Query: 14 LGSHNPYWRLTESSD-VLRFSTTETTEP---------DRTLQLSAEQAARIREMTVITSS 63 L + S +L +T P + +L+ E + S Sbjct: 116 LFGYQSAEATGRSLGDILAIRSTGKDNPLLTPLVCCGEEHSRLTCEAEGIRSD----GSR 171 Query: 64 LMMSLTVDESDLSV--HLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 +L++ + H +G + + +T R+ + L + ++ + Sbjct: 172 FPAALSLSRVQMKGVWHFLG-------IVRDVTESRETGERLRETNEKL---DTLIQASP 221 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 IV +D G + +NR + G +V+G+ + + + R AA R+ + + Sbjct: 222 QGIVAVDCGGKVTLWNRAAVEIFGWSAEEVLGK-PYPVAPAER-AAEHRKLRELVLQGKR 279 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 +VEL G + + + + +I +DI+ +R ++ L Sbjct: 280 ITDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDISARKRNEQEL 331 Score = 66.1 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 4/121 (3%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 ++ I+ D G + N E G + + G+S+ + R + + Sbjct: 89 LLDHIADGIISFDGAGRLLSLNPAAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTPL 148 Query: 176 FF--RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + E G R + G + D+TE R ERL Sbjct: 149 VCCGEEHSRLTCEAEGIRSDGSRFPAALSLSRVQMKG--VWHFLGIVRDVTESRETGERL 206 Query: 234 R 234 R Sbjct: 207 R 207 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 877 bits (2268), Expect = 0.0, Method: Composition-based stats. Identities = 200/562 (35%), Positives = 308/562 (54%), Gaps = 6/562 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + ++ L + V + AI+I D+R NI R N TG +H+V+G++ Sbjct: 270 EDITERKNFEDNLRLSATVFEGSTEAIIITDARANILRVNSAFTAMTGYADHEVVGKNP- 328 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 +L S R S ++ E+W G + S + Sbjct: 329 RLLKSGNHHEEFYRAMWATLSSTGQWQGEIWNRRKNGDIFPAWLTLCAVRNSEDKITNYV 388 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLD 275 DIT + A+ERL A+ D++TGLPNR D + HA+ A D ++ +++LDLD Sbjct: 389 GISRDITLRKEAEERLSYQASHDALTGLPNRARFHDRLTHALARAGRDRHEFAILFLDLD 448 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA- 334 FK +ND GH GD LL+ V+ +L LAR GGDEF++L + + A+A Sbjct: 449 RFKVINDTLGHTVGDFLLQGVTKRLLGGTRESDTLARWGGDEFIILLESIRGAEDAAVAA 508 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 RIL L PF + EV+ S S+GI++ P G D A++R AD AMY AK+ G+ + Sbjct: 509 RRILDVLAEPFSVQGHEVFVSGSIGISVYPRDGEDVQALLRCADIAMYRAKDSGKNDYQF 568 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 + M+ E L L+ +LR AL+ ++ V+HYQP++ G + EAL+RW P+RGL+ Sbjct: 569 YESTMSTGGLERLKLEGDLRYALKRNEFVLHYQPRVNINTGLIVGAEALIRWDLPDRGLL 628 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTA 512 PLDFI AEESG I+P+G WV+ Q KW+D G+ RV+VN+S Q + + Sbjct: 629 WPLDFIPLAEESGFIIPIGEWVLRTACLQCRKWQDAGVPHPRVSVNLSTHQFKKDNLTST 688 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + ++L+E +++E+TES ++EN E A++ +Q ++LG V +DDFGTGYSSL L Sbjct: 689 VDRILKETGLSPGLLELEITESAMMENLEKAVATLQGLAELGVNVAIDDFGTGYSSLGYL 748 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 RFPI A+K+DQ FVR I ++ +I+++ + LNL+V+AEGVE+ ++ L Sbjct: 749 KRFPIGALKIDQSFVRHIPSNIDDTAIAMSIISLGKTLNLKVVAEGVETQEQLTVLRNYQ 808 Query: 633 INERQGFLFAKPMPAVAFERWY 654 +E QG+LF++P+ A + Sbjct: 809 CDEAQGYLFSQPVDADRMTEFL 830 Score = 80.3 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 2/132 (1%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 R+L +A I +++ G + NR + G +E ++I S L + Sbjct: 153 RELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEMLGFQERELIESSFPDLCVPE 212 Query: 164 REAAASRRNNRVFFRSGNAYEV-ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 R + G Y E+ + G+ ++ + + I D Sbjct: 213 NRD-VHERELKKSVEQGLEYHGFEIPLVHKDGRIIWTKLTLSPMKDAAGVPKYFIHIVED 271 Query: 223 ITEERRAQERLR 234 ITE + ++ LR Sbjct: 272 ITERKNFEDNLR 283 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 876 bits (2264), Expect = 0.0, Method: Composition-based stats. Identities = 199/613 (32%), Positives = 328/613 (53%), Gaps = 20/613 (3%) Query: 49 EQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSH 108 E A ++ IT L +++ D + AG D A + + Sbjct: 802 ETAGVRKDGRRITIRLAVTVMRDA-------------QGALAGYLGTIVDITA-QKQAAA 847 Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 L+ A +V + I I D+ NI N+ TG E +V+G++ L R + A Sbjct: 848 QLNLAAKVFEQGGEGIAITDAACNIVMINQAFTRITGYSEVEVLGRNPSLLASGRHD-QA 906 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 ++ S ++ E+W G + G G I + DIT+ + Sbjct: 907 FYQSMWESIESLGHWQGEIWNRRKDGSVYPEWLLISRVDGDGA-PTHYIGTFIDITQHKE 965 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGH 286 A+ ++ LA+ D++TGLPNR+ +++ + H + A + + ++++DLD FK VND+ GH Sbjct: 966 AEASIQRLAHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDSLGH 1025 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFR 346 GD LL V+ + + + ++R GGDEF+V+ +T +A+++L + +R Sbjct: 1026 RVGDALLIQVAERLRRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVAAKLLEVMAPAYR 1085 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 I E+ S S GIA+ P G A+ ADTAMY AK+ GR +C FT EM +R Sbjct: 1086 IEQHELTCSLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFTAEMQERSARN 1145 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEES 465 L ++ +LR+ALEN +L +HYQP+ T + EAL+RWQ P+ G++ P++FI AEE Sbjct: 1146 LQIENDLRRALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEEC 1205 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEY 524 GLI+P+G WV+ V Q+ W+ +G+ + VAVN+SA Q ++ + ++L Sbjct: 1206 GLILPIGEWVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAA 1265 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 +++ELTES ++N A++ + + LG ++ +DDFGTGYSS+S L RF + +K+D+ Sbjct: 1266 QFLELELTESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDR 1325 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 FV D+ P +++V A +++A+ L LQ IAEGVES + AFL G +E QG+LF++P Sbjct: 1326 SFVADLAADPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRP 1385 Query: 645 MPAVAFERWYKRY 657 + F + + + Sbjct: 1386 LAPAQFAAFVRAH 1398 Score = 77.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 16/153 (10%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 N++ + V + L + V++ A IV D +G I FN E G H+ Sbjct: 691 ENSALLAERRQVEQALRESEALKASVLASAACGIVATDPQGLITVFNPGAEAIFGYAAHE 750 Query: 151 VIGQSVFKLFMSR----------------REAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 V+G+ L+ R A SG E E G Sbjct: 751 VVGKVTPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQVDERETAGVRKDG 810 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEER 227 +R+ + V + + + DIT ++ Sbjct: 811 RRITIRLAVTVMRDAQGALAGYLGTIVDITAQK 843 Score = 43.0 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 40/133 (30%), Gaps = 2/133 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 + R + + E + + L G + D +IG+ + + Sbjct: 282 LRRLVRQRTATLEATLDAIPDPLFELGLDGRYHDCHTPRADLLAAPPDALIGRLLTDVLP 341 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 + A ++ + + +G + + E + Sbjct: 342 AAAAATCLSALREA--QATGHSAGQQFELPLRGGNFWFELSVARKPTGVGREPRFVVLAR 399 Query: 222 DITEERRAQERLR 234 DI+E +RA+ RLR Sbjct: 400 DISERKRAEARLR 412 Score = 41.8 bits (98), Expect = 0.096, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 16/197 (8%) Query: 42 RTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPA 101 R Q + A + E+ + + L+V V GR+ A + S A Sbjct: 353 REAQATGHSAGQQFELPLRGGNFWFELSVARKPTGV---GREPRFVVLARDISERKRAEA 409 Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS--VFKL 159 R + V E LD + R++ GL + G + + +L Sbjct: 410 RLRMATEATQL---VFWE-------LDLLSDQLRYDTSMLQVLGLDHGEDPGSTGALMEL 459 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFL-FRNKFVHSGSGKNEIFLIC 218 AA + + + E I T G+ ++L R + + + + Sbjct: 460 VHPDHRAALTESFRAAMASAEPVFSFEHQIVTHSGEGVWLQTRGRVAQRDAAGRAVLAVG 519 Query: 219 SGTDITEERRAQERLRI 235 + +IT+ +RA+ L Sbjct: 520 TAMNITDRKRAEAALLR 536 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 875 bits (2263), Expect = 0.0, Method: Composition-based stats. Identities = 211/641 (32%), Positives = 333/641 (51%), Gaps = 7/641 (1%) Query: 26 SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKIN 85 + D+L T E + Q A R T +++L + L + ++ + Sbjct: 233 TRDILALPTGARAESVIHAYVDGYQHATDRAHTYRVLLFVVALGL-AGYLMIAILRLQRT 291 Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 AG + R L V + A + I D++ I N D TG Sbjct: 292 SLALAGANEHLEERIQTLRLTESELHLYANVFTNASEGMAITDAQARIVAVNPAFTDITG 351 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 ++ G++ L R++AA R + G ++ E+W G+ + + Sbjct: 352 YSIEEIHGRTPAVLASGRQDAAFYREMWATLGKRGQ-WQGEIWNRRRSGEIYPEWLSITA 410 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN 265 + I +DIT+ + ++ R+R LA+ D++TGLPNR +QD + AI A N Sbjct: 411 ITEGDGGVSHYIGIFSDITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAILKARRN 470 Query: 266 --KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 + V++LDLD FK +ND GH GD LLR V+ L + +AR GGDEF+++ Sbjct: 471 STQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFVIVLP 530 Query: 324 NTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 + +A +IL L P R+G E+ + S+GIAL P G+D + ++R+AD AMY Sbjct: 531 DLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAAMY 590 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEA 441 AK GR F + +MN L L+ LR AL+ ++L +++QPK+ G + EA Sbjct: 591 RAKADGRNGFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGCEA 650 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNIS 500 L+RWQ P+ GL+ P F+ AEESGLIVP+G WV+ + RQ+ W D G+ + VAVN+S Sbjct: 651 LLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVNLS 710 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 +Q A Q I +++ L E +++ELTE+ L+ + E ++ + + +G + +D Sbjct: 711 GQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLAID 770 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFGTGYSSL+ L +F ++A+K+D+ FV DI + A++A+A L L V AEGVE Sbjct: 771 DFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVE 830 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 +A + FL ++G ++ QGFLF +P PA AF + +RA Sbjct: 831 TAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQRLADDDRRA 871 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 873 bits (2257), Expect = 0.0, Method: Composition-based stats. Identities = 189/556 (33%), Positives = 309/556 (55%), Gaps = 5/556 (0%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 + L A +V + AI+I D + N +G + +V+G++ L R Sbjct: 363 KQEEATLRLAARVFDSSGEAILITDENVRVVAVNHSFVAMSGYRSEEVMGKNPRMLSSGR 422 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 +A R + G ++ E+W G+ + + + I D Sbjct: 423 HDAEFYRAMWDDINQHG-YWQGEIWDKHKSGRIYPKWMSITAVRDEHGKVVNYISIARDT 481 Query: 224 TEERRAQERLRILANTDSITGLPNRNAMQDLIDH--AINHADNNKVGVVYLDLDNFKKVN 281 TE+ A++ + LA D +TGLPNR ++D + A+ H D ++ +++LDLD FK +N Sbjct: 482 TEQTEAEKNIHFLAYYDVLTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDRFKYIN 541 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRL 341 D+ GH GD+LL+ V+L I C+ +AR GGDEF+VL +SA +A ++L L Sbjct: 542 DSMGHSVGDRLLQSVALRIQDCVREGDTVARLGGDEFIVLLREAGESAASVVAQKLLIAL 601 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 P+ + + T S+GI++ P+ D+ +I++AD AMY AKE GR F F PEMN Sbjct: 602 ATPYDLDGQVISTQASIGISIYPDQAQDADTLIKNADMAMYRAKEEGRNNFQFFVPEMNF 661 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFIS 460 RV ++ +LR ALE +L + YQP+ G + +EAL+RW P +G + P +FI Sbjct: 662 RVDLLFSMEKDLRLALERGELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIP 721 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQE 519 AEE+G IV +G WV+ Q+A+WR G+ +L +AVN+S RQL + +K VL E Sbjct: 722 VAEETGQIVAIGEWVLRTACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLE 781 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 + +++E+TE ++ +++ A + + LG Q+ +DDFGTG+SSL+ L + P++ Sbjct: 782 TGLDARHLELEITEGIMMGDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNK 841 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+DQ F+RDI +++R+I+++ LNL+VIAEGVE+ ++ FL G +E QG+ Sbjct: 842 LKIDQSFIRDIETDEGDAAIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGY 901 Query: 640 LFAKPMPAVAFERWYK 655 +++P+ A F R+ K Sbjct: 902 FYSRPLLAEDFMRFVK 917 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 872 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 200/586 (34%), Positives = 304/586 (51%), Gaps = 7/586 (1%) Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDL-SHGLSFAEQVVSEAHSAIVILDSRGNIQR 135 VH + A A R L L A V ++I D++ I Sbjct: 231 VHERAEFRRAADGAALAGIGTVQDITDRKLAEQSLRQAATVFENTGEGVIIADAKNRIIA 290 Query: 136 FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQ 195 NR TG +VIG+S L R +AA R +G ++ E+W G+ Sbjct: 291 VNRAFTVITGYGPEEVIGRSPNLLRSGRHDAAYYDAMWRGVHEAG-HWQGEIWNRRKNGE 349 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLI 255 V + +DI+ + + RL+ LA+ D++T LPNR + + Sbjct: 350 IFPELLTLSVVRDHNGKVSHYVGVFSDISRMKETEARLQRLAHYDALTDLPNRVLLNLRL 409 Query: 256 DHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 H + + + V++LD+D FK VND+ GH GD+LL +++ + S + + LAR Sbjct: 410 AHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDTLARL 469 Query: 314 GGDEFLVLASNT-SQSALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDST 371 GGDEF++L S + + A I+ L F++ EV+ S+GI+L P D+T Sbjct: 470 GGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDTDDAT 529 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 +I +AD A+Y AKE GR + +T ++ + E L L+ LR+ LE + V+H+QP + Sbjct: 530 QLISNADAALYQAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQPVVA 589 Query: 432 W-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 +GEV EALVRW P G+I PL FI AEE+GLIVPLG WV+ RQ +W D G Sbjct: 590 LDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREWLDCG 649 Query: 491 INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQF 550 L +AVN+S RQ + ++ +L F +++E+TES ++E+ + A++ + Sbjct: 650 RPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAVATLAAL 709 Query: 551 SQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQAL 610 LG ++ +DDFGTGYSSL+ L RF +DA+K+D+ FVRDI + +V +VA+A + Sbjct: 710 KGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAMAHQM 769 Query: 611 NLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 L VIAEGVE+A++ AFL G QG+L +P A F +R Sbjct: 770 RLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADFLGAVER 815 Score = 77.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 1/125 (0%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 S ++ + D G NR E YTG +E ++IG + LF A + R Sbjct: 19 SLLRALIDVIPDLVFFKDEAGRYLGCNRAFEAYTGRREAELIGYTDRDLF-DLSTADSYR 77 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 + SG + E WI G+R+ + K + ++ D+T R Sbjct: 78 GYDNAVLASGRSSRNEEWIVYPDGRRVLVDTLKTPFRDAASGRRGVVGISRDVTVFRETA 137 Query: 231 ERLRI 235 E LR Sbjct: 138 EALRR 142 >UniRef50_B4T6U5 Cyclic diguanylate phosphodiesterase (EAL) domain protein n=44 Tax=Salmonella enterica RepID=B4T6U5_SALNS Length = 663 Score = 868 bits (2243), Expect = 0.0, Method: Composition-based stats. Identities = 521/658 (79%), Positives = 585/658 (88%), Gaps = 4/658 (0%) Query: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI 60 MK ++E T L N L SH WRL + +VL S T T+ ++T++LS EQA RIRE+T I Sbjct: 5 MKQIQEQTAL-NPLHSH---WRLADDRNVLYLSPTGETDTEKTVELSPEQAGRIREITAI 60 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 TSSL+++L +++ +VHLVGRKIN REWAG+ + W DTPAVA + LSFAEQ+VSEA Sbjct: 61 TSSLLITLLIEKQVTAVHLVGRKINNREWAGSLATWPDTPAVAPTQAQELSFAEQIVSEA 120 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 +S I ILDSRG I RFNRLCE+YTGLKE DVIGQSVFKLFMSRREA ASR FFR+ Sbjct: 121 NSVIAILDSRGKICRFNRLCEEYTGLKERDVIGQSVFKLFMSRREAVASRHYIENFFRNV 180 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 NAYE+E WI T KGQRLFLFRNKFVH+GSGKNEIFLIC+GTDITEERR QERLRILANTD Sbjct: 181 NAYEIERWIKTRKGQRLFLFRNKFVHNGSGKNEIFLICAGTDITEERRTQERLRILANTD 240 Query: 241 SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 ++TGLPNRNA+ + I+HAI A ++VG+VYLDLDNFKK+NDAYGH+FGDQLL+ VSLA+ Sbjct: 241 TVTGLPNRNAIHEFINHAIASAGESQVGIVYLDLDNFKKINDAYGHMFGDQLLQAVSLAL 300 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 LSCLE DQ+LAR GGDEF+VLA++TSQ+ALEA+ASRILTRLR PFRIGLIEVYT C++GI Sbjct: 301 LSCLEEDQLLARLGGDEFIVLAAHTSQAALEAVASRILTRLRQPFRIGLIEVYTGCAIGI 360 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 +L+P HG DS ++IR ADTAMY AKEGGRGQFCVF+PEMNQRVF+Y WLDTNLRKALEND Sbjct: 361 SLAPRHGQDSESLIRTADTAMYNAKEGGRGQFCVFSPEMNQRVFDYHWLDTNLRKALEND 420 Query: 421 QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 QL+IHYQPKITWRGEVRSLEALVRWQSPERGLIPPL+FISYAEESGLIVPLGRWVILDVV Sbjct: 421 QLLIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVV 480 Query: 481 RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 RQ+AKWRDKGINLRVAVN SARQLADQT+FTALKQ L +LNFEYCPIDVELTESCLIEND Sbjct: 481 RQIAKWRDKGINLRVAVNFSARQLADQTLFTALKQALYDLNFEYCPIDVELTESCLIEND 540 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 LALSVIQQFSQLGAQ+HLDDFGTGYSSLSQLARFPIDA+KLDQ FVRDIHKQP+SQSLV Sbjct: 541 TLALSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAVKLDQAFVRDIHKQPLSQSLV 600 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 RAIVAVAQALNLQVIAEGVE+AKEDAFLTKNG+NERQGFLFAKPMPAV+FERWYKRY Sbjct: 601 RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAVSFERWYKRYQ 658 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 867 bits (2241), Expect = 0.0, Method: Composition-based stats. Identities = 176/555 (31%), Positives = 297/555 (53%), Gaps = 5/555 (0%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 + L + Q+ +++ I++LD +I N TG E + +G++ L + Sbjct: 488 EKEEQLQLSAQIFAQSSEGIMLLDPNCHIVMVNSAFTHITGYSEEETLGRNPKMLASGQH 547 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 + + ++ E+W G + S I + TD+T Sbjct: 548 DRNFYATMWEA-IETEGRWQGEVWNRRKDGSLYPEWLLIQTMRDSRGTLTHYIGTFTDLT 606 Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVND 282 E + +ER++ LA+ D +TGLPNR + + AI+ A + +++LDLDNFK VND Sbjct: 607 ERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLAISLAQRRHEPLALMFLDLDNFKNVND 666 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLR 342 + GH GD+LL+ S +++ + ++R GGDEF+++ T +A R+L Sbjct: 667 SLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDEFVLVLPGTDTDGAAYLAERLLNIAA 726 Query: 343 LPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQR 402 + I E+ + S+GIA+ P G+D + R AD AMY AK+ GR +C FT EM R Sbjct: 727 RQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADAAMYRAKQSGRNDYCFFTTEMQAR 786 Query: 403 VFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISY 461 L +D LR+ALE +Q + YQP+++ + EAL+RW P+ G PP +FI Sbjct: 787 SARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVGFEALIRWTHPQFGNTPPDEFIPI 846 Query: 462 AEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQEL 520 AE +G I+P+G WV+ VRQ+ W+D G+ ++ ++VN+SA Q + + +L+E Sbjct: 847 AESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISVNLSAVQFRHPRLPELVMAILEEA 906 Query: 521 NFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAI 580 + +ELTE +EN A++VI + + G ++ +DDFGTGYSSL+ L RF + ++ Sbjct: 907 GVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRISIDDFGTGYSSLTYLKRFNVYSL 966 Query: 581 KLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFL 640 K+D+ FV+D+ ++V A++++A +L + +AEGVE+ ++ FL G E QG+ Sbjct: 967 KIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAEGVETKEQLEFLRSRGCTEIQGYY 1026 Query: 641 FAKPMPAVAFERWYK 655 ++P+ A A + + Sbjct: 1027 LSRPLQADAVFSFIE 1041 Score = 56.4 bits (136), Expect = 4e-06, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 1/103 (0%) Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 FN + G + G+ + A +R + + + E Sbjct: 12 IHFNDKLCEIFGYTPEE-FGKKGWNELCDTPCAEENRGIESLKRGDIDEFREEKAFRRKN 70 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 G+ + + +L+ + DITE ++AQ + L Sbjct: 71 GRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRL 113 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 866 bits (2239), Expect = 0.0, Method: Composition-based stats. Identities = 205/591 (34%), Positives = 314/591 (53%), Gaps = 9/591 (1%) Query: 78 HLVGRKINKREWA-GNASAWHDTPAVAR-DLSHGLSFAEQVVSEAHSAIVILDSRGNIQR 135 H R+ ++ + N A AV + + L A V +VI D + I Sbjct: 532 HRTPREPSQADLGLINEFALLTALAVQKVYAAESLKQAAAVFESTREGVVITDLQPRIVA 591 Query: 136 FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQ 195 NR + TG E V+G++ + R + + + E+W G Sbjct: 592 INRAYAEITGYSEEQVLGKNPRIIKSGRHD-KLFYQAMWASLTKAGYWRGEVWNRRRSGD 650 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLI 255 + + TDIT+ ++++ RL LA+ D++TGLPNR +Q + Sbjct: 651 IYPQWLTISTVFNDRNEPCNYVGVFTDITQIKQSEARLAHLAHYDALTGLPNRLLVQSRL 710 Query: 256 DHAINH--ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 HAI N++ +YLDLD FK VND+ GH GD+LL ++L + L + LAR Sbjct: 711 HHAIERTLRHGNQIAALYLDLDRFKNVNDSLGHPIGDELLVMLALRLKKRLREEDTLARL 770 Query: 314 GGDEFLVLASNTSQSALEA-MASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDST 371 GGDEFLV+ + S A +A ++ L PF + E++ + S+GI+L P + T Sbjct: 771 GGDEFLVVLEDIKDSNEPAMVAQTLIDLLATPFSLPSGHEIFINTSIGISLFPTDANSVT 830 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 +I+HAD AMY AK+ GR + T ++ E L L+T LR+AL + V+HYQP I Sbjct: 831 ELIQHADMAMYLAKQEGRNTYRYHTDALSIAANERLVLETQLRQALSAGEFVLHYQPLID 890 Query: 432 WR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 R G+V +EALVRWQ P++ ++ P FI AEE+GLIVPLG WV+ Q W D Sbjct: 891 ARKGQVMGVEALVRWQPPDKAMVSPGKFIPIAEETGLIVPLGEWVLRTACAQGRAWMDAD 950 Query: 491 IN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 L +AVN+S RQ + + ++QVL+E +++ELTES +E+ E ++ +++ Sbjct: 951 FPPLVMAVNLSVRQFQSENLVELIRQVLEETKLPAACLELELTESMFMEHAEQSIEILKT 1010 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 LG ++ +DDFGTGYSSL+ L RFPID +K+DQ FV + P + + I+A+A+ Sbjct: 1011 LKSLGVRLSIDDFGTGYSSLTYLKRFPIDKLKIDQSFVHGLAYDPNDREIAATIIAMARN 1070 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 L L V+AEGVES ++ L ++G + QG+LF +P+PA E W++ + Sbjct: 1071 LKLDVLAEGVESEQQLDILNQHGCDYYQGYLFHRPVPAQELEVWFRENKRN 1121 Score = 48.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 23/196 (11%), Positives = 71/196 (36%), Gaps = 20/196 (10%) Query: 64 LMMSLTVDE-SDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQ------- 115 L + L D+ S+++V +A ++T A+ + H A + Sbjct: 215 LPIVLVTDQGSEIAVARALHMGVDDYLTKHAGYLYETTAILEKVQHQAELARERISLKKT 274 Query: 116 ------VVSEAHSAIV---ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 +++ + + + ++ + + + E G + +V+ + + L + + Sbjct: 275 SLRLSDLLAASPTILYNLRVVGTTFQLVWVSENIERLLGYTQEEVMAEGWWNLHVHPDDR 334 Query: 167 AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEE 226 A+ + G + + GQ +++ + + ++ + D++E Sbjct: 335 EAALTHQSELLAVGQL-TYDYRLLHRNGQSVWIHDELRLVRSINGKPLEVVGAWLDVSEH 393 Query: 227 RRAQERLRILANTDSI 242 +R + L A+ ++ Sbjct: 394 KRTE--LIRQAHQSAL 407 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 866 bits (2239), Expect = 0.0, Method: Composition-based stats. Identities = 188/563 (33%), Positives = 305/563 (54%), Gaps = 6/563 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + + L V S ++ AI++ D+ I N TG + DVIG++ Sbjct: 335 QDISERKRTEAHLQLMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGKNPR 394 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L R G A++ ELW G+ + + + I Sbjct: 395 ILSAGTTPTEVFSDMWTCLHREG-AWQGELWDRKKNGEAYPKWLSISLVRDEDGQIRNHI 453 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLD 275 S DI+E + QER+R LA+ D++T L NR ++ + + A+ N+ + ++ +DLD Sbjct: 454 GSFIDISELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLD 513 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMA 334 FK +ND GH GD+LL V+ + + ++AR GGDEF++ S + +A Sbjct: 514 RFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLA 573 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 I + P+ I E+ TS S+GI + P GS+ ++++AD AMY AK GRG + Sbjct: 574 DDITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQF 633 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLI 453 FT +MN E + L+++LR A+ + ++HYQP++ R G + +EAL+RWQ P RGL+ Sbjct: 634 FTEDMNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLV 693 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTA 512 P DFI AEESG+I +G WV+ + RQ+ W+++GI +LR+++N+SA Q D+T+ Sbjct: 694 SPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPAR 753 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + ++L + +D+E+TES + + + ++SV++ S G + +DDFGTGYSSL+ L Sbjct: 754 IHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYL 813 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 PI +K+D+ FV+DI P + V +A L L+V+AEGVE+ + FL G Sbjct: 814 KLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIG 873 Query: 633 INERQGFLFAKPMPAVAFERWYK 655 + QG+L +KP+PA ER+ + Sbjct: 874 CEKVQGYLISKPLPADQAERFIR 896 Score = 80.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 9/152 (5%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQ----VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 + + +V R L AEQ + A I G+ N G Sbjct: 202 IEGFIEDISVRRTTLEALEAAEQRYRNIFEHASEGIFQSTRDGHYLAANPALAKLYGYDN 261 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA---YEVELWIPTCKGQRLFLFRNKFV 205 + + + R A +E E++ G R+++ N V Sbjct: 262 AQALMTDLADIERRLYVQPNRREEFLTLIEKNGAILNFESEVY--RRDGSRIWISENAHV 319 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILA 237 G I + DI+E +R + L+++A Sbjct: 320 VFGPQGEFICYEGTVQDISERKRTEAHLQLMA 351 Score = 46.4 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 3/109 (2%) Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQS--VFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 D+ + + C++ +G +++G++ ++ ++ R SG + V Sbjct: 113 DADWTMVFVSDGCQELSGYASSEILGKTGVSWEEITHPQDRGRVRACIEDAIGSGQRFAV 172 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + I GQ ++ + + DI+ R E L Sbjct: 173 QYRIVCKSGQVKWVIERGVAIRDELDESV-IEGFIEDISVRRTTLEALE 220 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 865 bits (2237), Expect = 0.0, Method: Composition-based stats. Identities = 193/564 (34%), Positives = 305/564 (54%), Gaps = 12/564 (2%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 + L + V + +VI D I NR TG E V+G++ K+ S Sbjct: 224 RATEALRLSATVFASIREGVVITDLEPRIVAVNRAYMRITGYSEEQVLGKNP-KIIKSGL 282 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS-----GSGKNEIFLICS 219 + ++ + E+W G+ + N + Sbjct: 283 HDKTFYQAMWATLKATGHWSGEVWNRRKNGEIYPQWLTINAVCIDSSCCDESNSCNYVGV 342 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNF 277 TDI++ ++++ +L LA+ D +TGLPNR Q + AI A + VGV+Y+DLD F Sbjct: 343 FTDISQIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIERAQRHGRLVGVLYIDLDRF 402 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL-EAMASR 336 K VND+ GH GD+LL ++ + + + LAR GGDEFL++ + +A Sbjct: 403 KNVNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEFLLVLEDVRDLGDPAFVAQS 462 Query: 337 ILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 ++ L PF + E++ + S+GI+L PE S++T +I+H+D AMY AK+ GR + Sbjct: 463 LINLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQHSDMAMYQAKKEGRNTYRYH 522 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIP 454 T ++ E L ++ LR AL ++L++HYQP + R G V +EALVRWQ P + ++P Sbjct: 523 TEALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGYVVGVEALVRWQPPGKAMVP 582 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTAL 513 P FI AEE+GLIVPLG WV+ +Q W D G+ L +AVN+S RQ + + + Sbjct: 583 PGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLVMAVNLSVRQFQSENLVGMV 642 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 +++L+E +++ELTES +E+ E ++ + + LG + +DDFGTGYSSL L Sbjct: 643 QRILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLGVHLAIDDFGTGYSSLIYLK 702 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RFPID +K+DQ FVRD+ + + I+A+A+ L L V+AEG+ES ++ AFL + Sbjct: 703 RFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGVLAEGIESEEQLAFLRQQDC 762 Query: 634 NERQGFLFAKPMPAVAFERWYKRY 657 + QG+LF +P+PA+ E W + + Sbjct: 763 DYYQGYLFHRPVPAIELEAWLREH 786 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 864 bits (2234), Expect = 0.0, Method: Composition-based stats. Identities = 189/559 (33%), Positives = 303/559 (54%), Gaps = 5/559 (0%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 + + L+ QV + AI+I DS I NR TG +V+G++ KL Sbjct: 181 SDRKREEDRLNLIAQVFERSTDAIMITDSLNRIVSVNRAFTTVTGYSADEVLGRNP-KLL 239 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 S R R ++ E+ G+ + I Sbjct: 240 ASGRHDRDFYREMWSAIERNGSWSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIAIY 299 Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFK 278 +IT++R A R++ LA+ D +T LPNR +QD + + HA + + V++LDLD FK Sbjct: 300 AEITDQRAAASRIQFLAHYDPLTLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFK 359 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRI 337 +ND+ GHL GD LL++V+ + + + D +AR GGDEF+V+ + +A +I Sbjct: 360 TINDSLGHLVGDHLLQEVAQRLKASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKI 419 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 + + + + S S+GI++ P+ D +IR+AD AMY +K GR QF FT Sbjct: 420 IEAMEQTIPVNGYVLNVSFSIGISVFPDDAMDPDTLIRNADIAMYRSKASGRNQFQFFTA 479 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLD 457 +MN E L L+ +L +A+E + + +QP+ G + EAL+RWQ P+RGL+ P + Sbjct: 480 DMNAHALERLALENDLHRAVERGEFRLMFQPQFEGSGSIIGAEALLRWQHPQRGLVTPAE 539 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQV 516 FI AEE+GLIVP+G WV+ +QV WRD G+ + V+VNISA Q + + + ++++ Sbjct: 540 FIPVAEETGLIVPIGTWVLERACQQVRAWRDAGLKKITVSVNISALQFSQKNLLELIRRL 599 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L N E +++ELTES L+ + ++ + ++G ++ +DDFGTGYSSLS L FP Sbjct: 600 LAVSNIEPGTLELELTESVLMHDHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFP 659 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 I +K+DQ FVRD+ + ++ AI+ +A+ LN++VIAEGVE+A++ +FL +E Sbjct: 660 ISKLKIDQSFVRDLSDGGDAGAITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEF 719 Query: 637 QGFLFAKPMPAVAFERWYK 655 QG F++P+ F + Sbjct: 720 QGHFFSQPVSPEKFAELLR 738 Score = 52.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 62/192 (32%), Gaps = 9/192 (4%) Query: 47 SAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDL 106 S E ARIRE+ +L D S + ++++ E + R L Sbjct: 11 SDELIARIRELEARLGAL-----RAAPDTSSLVEELRVHQIELEAQN---RELIEARRAL 62 Query: 107 SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 + A + LD G I N G VIG + + A Sbjct: 63 EDARDRYSDLYDFAPVGYMTLDEHGVILEINLTGARLLGQDRAQVIGMPLSGWVPNGAVA 122 Query: 167 AASRRNNRVFFRSGNAY-EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 RV G + + L + + R + + + + D+++ Sbjct: 123 QLFHHLRRVLSEPGRVFDHLPLHTSLVRESPIRHVRLESIAFTQYGSGRLCRTALVDLSD 182 Query: 226 ERRAQERLRILA 237 +R ++RL ++A Sbjct: 183 RKREEDRLNLIA 194 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 863 bits (2232), Expect = 0.0, Method: Composition-based stats. Identities = 194/566 (34%), Positives = 312/566 (55%), Gaps = 5/566 (0%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 D + +S L V ++ ++IVI D NI+ N TG +V+G++ Sbjct: 585 DAETERKKMSETLLKLSLAVEQSPNSIVITDLDANIEYANSNFTKVTGYSLDEVLGKNP- 643 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 + S + A+ + G ++ EL+ G S + + Sbjct: 644 RFMQSGKTPKATYEDMWAHLTRGEPWKGELFNRRKDGTEYIESVLISPVSQVDGRVMNYL 703 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLD 275 DITE+R +ER+ L + D +TGLPNR + + +A++ A + ++ V++LDLD Sbjct: 704 AIKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVMFLDLD 763 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS 335 +FK +ND GH GDQLL DV+ + L + ++R GGDEF+++ T ++ +A+ Sbjct: 764 HFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDENGAAHVAA 823 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 +++ + F+ E+ +CS+GIA+ P G + + ++ADTAMY K GR FC F Sbjct: 824 KLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRNGFCFF 883 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIP 454 T EM L L LR AL QL +HYQP+I+ + G V EAL+RWQ PE G I Sbjct: 884 TSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPELGSIS 943 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTAL 513 P +FI AE++G I+P+G WV+ ++Q+ W D G+ + +AVN+SA Q + + Sbjct: 944 PAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSNLMELV 1003 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 +L E + +++ELTE+ +++ +LA+ V+ + G ++ +DDFGTGYSSLS L Sbjct: 1004 TSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSSLSYLK 1063 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RF + +K+DQ FV DI P +++V AI+ +A +L +Q IAEGVE+A + +FL G Sbjct: 1064 RFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFLRLQGC 1123 Query: 634 NERQGFLFAKPMPAVAFERWYKRYLK 659 NE QG+ F+KP+PA F + ++ + Sbjct: 1124 NEVQGYYFSKPLPAEQFVSYLQKQGQ 1149 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 863 bits (2230), Expect = 0.0, Method: Composition-based stats. Identities = 203/604 (33%), Positives = 319/604 (52%), Gaps = 11/604 (1%) Query: 67 SLTVDESDLSVHL---VGRKINKREWAGNASAWHDTPAV--ARDLSHGLSFAEQVVSEAH 121 LT + D + +N+ + G+A + R L A QV ++ Sbjct: 26 PLTFETQDGEGESERYLEVTVNQLNYQGDAYLCATARDISGRRQTERQLRLAAQVFESSN 85 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 AI+I D I NR TG E +V G LF R E A ++ + + G Sbjct: 86 EAILISDPDNRILTVNRAFGHITGYGEAEVRGSKASMLFSDRHEPAFFQQMWQTLQQRGQ 145 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 + E+W G+ + N V + TDI+E + + R++ +A D+ Sbjct: 146 -WSGEIWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFTDISERKEQEARVQHMAEYDA 204 Query: 242 ITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +T LPNR + D + AI A +N++ V+++DLD+FK +ND GH GD+LL++V+ Sbjct: 205 LTDLPNRVLVNDRLHQAIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARR 264 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSV 358 + + + R GGDEF+++ + +Q +A RIL ++ PF+IG + CS+ Sbjct: 265 LAGAVRGLDTVGRTGGDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSI 324 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 GI+L P+ GSD ++ +AD AMY AK GR F +T EMN +V E L ++ LR+A+E Sbjct: 325 GISLMPDDGSDIQTLLMNADLAMYHAKAHGRNTFRFYTREMNTQVAERLLMENRLRRAME 384 Query: 419 NDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 +QL + YQP+ G + EAL+RW+ P+ GLI P FI AE++GLIVPLGRWV+ Sbjct: 385 QEQLYLVYQPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLD 444 Query: 478 DVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 RQ + W G+ +RVAVN+SA QL +++ LQ +++E+TES L Sbjct: 445 QACRQASLWLRAGLEPMRVAVNVSAHQLMRHDFIDDVREALQRHALPGHCLELEVTESTL 504 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 + + +LA + +G ++ +DDFGTGYSSL+ L RF D +K+D+ F+ D+ + Sbjct: 505 MADADLASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEEN 564 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 ++V AIV +A AL ++ +AEGVE+ + FL G QG+L P+ R ++ Sbjct: 565 AAIVSAIVHLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRLEQ 624 Query: 657 YLKR 660 +R Sbjct: 625 QQRR 628 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 862 bits (2229), Expect = 0.0, Method: Composition-based stats. Identities = 183/568 (32%), Positives = 290/568 (51%), Gaps = 12/568 (2%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + L + I+I D + R N TG + IGQ+ +L S Sbjct: 328 RKQFESELRVSATAFE-TQEGILITDENNVMLRTNAAFTAITGYTNKEAIGQNP-RLLSS 385 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 R+ A+ + +E E+W G+ + +D Sbjct: 386 GRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLTVTAVKDRNGMVTNYVGVLSD 445 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKV 280 +T+ + A+E++ LA D +T LPNR + D + A+ A + V+++DLDNFK + Sbjct: 446 LTQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLFIDLDNFKAL 505 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ------SALEAMA 334 ND YGH GD LL+ V+ ++S + ++R GGDEF+VL + S E + Sbjct: 506 NDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDENPLDAASQAETVG 565 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 +I LR P+ IG E + + S+G L + +++ AD AMY AK+ GR Sbjct: 566 EQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQAKKEGRNVLRF 625 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIP 454 F P+M + + + L+ +LRKA+EN Q +HYQ ++ EAL+RW PE G++ Sbjct: 626 FDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVDESRHPFGAEALIRWFHPEHGMVS 685 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWR--DKGINLRVAVNISARQLADQTIFTA 512 P FI AEES LI+P+G WV+ ++ +W+ K ++VN+SA+Q Sbjct: 686 PDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQFRQTDFVNQ 745 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 ++ ++Q+ + +ELTES L++N E ++ + +LG + LDDFGTGYSSL L Sbjct: 746 VQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFGTGYSSLQYL 805 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 R P+D +K+DQ FVRDI +++VR I+A+A +L+L VIAEGVE+ ++ L+ G Sbjct: 806 KRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEEQQKHLSSKG 865 Query: 633 INERQGFLFAKPMPAVAFERWYKRYLKR 660 QG+LF KP+P FE ++ L + Sbjct: 866 CKNFQGYLFGKPVPIEQFETSLRKSLFQ 893 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 43/140 (30%), Gaps = 14/140 (10%) Query: 99 TPAVARDLSHGLSFAEQVVSEAHSAIV----ILDSRGNIQRFNRLCEDYTGLKEHD--VI 152 T D FA + A + D +R+N + G EH+ Sbjct: 73 TEEKLHDSEERWKFA---LEGAGDGVWDWNPQTDEAFFSKRWN----EIIGYTEHEFPAT 125 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF-RNKFVHSGSGK 211 G + + S Y+VE I G ++ R V Sbjct: 126 GSAWVAHLHPDDKDRVLSVIQGYLTDSREIYDVEYRIRCKDGSWKWILARGMLVSRDVYG 185 Query: 212 NEIFLICSGTDITEERRAQE 231 + +I + +DIT+ + +E Sbjct: 186 KPLRMIGTHSDITQRKVDEE 205 Score = 46.8 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 49/146 (33%), Gaps = 12/146 (8%) Query: 98 DTPAVARDLSHGLSF-----AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 + R + L +++ + I++S+ I FN E G+ + ++ Sbjct: 194 HSDITQRKVDEELVLKNLEKWKKLFDILPIGVSIVNSKNGIVDFNPSLEAILGISKEGLL 253 Query: 153 -G--QSVFKLFMSR-REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 G + L A + R +V + + G ++ + S Sbjct: 254 QGDYDNWEYLRTDNTHMDADEFPSLRAIKEQRVVKDVVIGVKKESGDIIWTSVSAAPLSY 313 Query: 209 SGKNEIFLICSGTDITEERRAQERLR 234 + + TDIT+ ++ + LR Sbjct: 314 DSNSC---VTVTTDITKRKQFESELR 336 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 862 bits (2228), Expect = 0.0, Method: Composition-based stats. Identities = 205/662 (30%), Positives = 322/662 (48%), Gaps = 22/662 (3%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARI---------REMTVITSSL 64 LG Y+ S L + E + +AA I + T Sbjct: 510 LGLDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPEAASICLSALREANEKGTSTGKQF 569 Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 + L + + + + + +R+ D + L A + + Sbjct: 570 ELQLAHGRAWFELSVARKSVGQRQEPRFIVLSRDITE-RKQAEEALRIAATAFE-SQEGM 627 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 + D++G + R NR + TG +V+G + +L S R A R +++ Sbjct: 628 TVTDAQGAVLRINRAFTEITGYSADEVVGHNP-RLLQSGRHDKAFYAAMWESIRRTGSWQ 686 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ + +G + + DIT + A++ +R LA D TG Sbjct: 687 GEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFMDITRRKAAEDEIRNLAFFDLQTG 746 Query: 245 LPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR + D + A+ + + ++ +DLDNFK +ND GH GD LL+ V+ + S Sbjct: 747 LPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLAS 806 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQS------ALEAMASRILTRLRLPFRIGLIEVYTSC 356 C+ +AR GGDEF+V+ N S+ E +A RIL L+ + + E ++ Sbjct: 807 CVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQSTA 866 Query: 357 SVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKA 416 S+GI L E + +++ AD AMY AK GR F PEM V L+ LR+A Sbjct: 867 SIGITLFSEQQETTEDLLKRADLAMYQAKAVGRNTLRFFDPEMQAVVTSRAALEAGLRRA 926 Query: 417 LENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVI 476 + +D+ +++YQ ++ +G + EAL+RWQ PERGL+ P +FI+ AE++GLI+PLGRWV+ Sbjct: 927 VTSDEFLLYYQAQVDGQGHLTGCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVL 986 Query: 477 LDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTES 534 Q+A+W R + +L VAVN+S RQ + VL + +ELTES Sbjct: 987 DAACTQLAQWATRPEMAHLTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTES 1046 Query: 535 CLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQP 594 LI + E ++ + + G LDDFGTGYSSLS L R P+D +K+DQ FVR+I P Sbjct: 1047 LLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDP 1106 Query: 595 VSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 ++ R ++A+ +L L VIAEGVE + FL + G + QG+LF +P+P FE + Sbjct: 1107 NDAAIARMVIALGDSLGLAVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFEAFV 1166 Query: 655 KR 656 +R Sbjct: 1167 RR 1168 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 8/142 (5%) Query: 100 PAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 A+ + + + + +L G D D+IG++V + Sbjct: 483 EALNTQVQRSQNQLQATFDAIPDPLFVLGLDGRYYDCRSSRADLLAAPAEDLIGKTVSDV 542 Query: 160 FMSRREA---AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 + +A R N +G +E++L G+ F G + F+ Sbjct: 543 LPPEAASICLSALREANEKGTSTGKQFELQL----AHGRAWFELSVARKSVGQRQEPRFI 598 Query: 217 ICSGTDITEERRAQERLRILAN 238 + S DITE ++A+E LRI A Sbjct: 599 VLS-RDITERKQAEEALRIAAT 619 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 861 bits (2226), Expect = 0.0, Method: Composition-based stats. Identities = 204/560 (36%), Positives = 314/560 (56%), Gaps = 6/560 (1%) Query: 101 AVARDLSH-GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 + R +H + A V E+ AIVI DS I R N TG + +V+GQS +L Sbjct: 485 ELQRQSTHKEMEMAASVFKESAEAIVICDSEDKILRVNPAFYKITGYSQIEVVGQSP-QL 543 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 S R + N + + ++ E+ G+ ++ + +I Sbjct: 544 LQSDRPIQSMLHNREAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKDENGDTQQIIYI 603 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNF 277 +DITE + +E + LA+ DS+T LPNR A Q ++ A+ A +K + V+++DLD+F Sbjct: 604 FSDITERKLFEEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQMAVMFIDLDHF 663 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM-ASR 336 K +ND GH GD LL+ V+ L + V++R GGDEF VL SNT + A + Sbjct: 664 KMINDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEFTVLLSNTRTDNATTVVARK 723 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 +L PF++ EV S S+GI + P++G +++ +AD+AMY AKE GR F +T Sbjct: 724 LLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAKEKGRNCFQFYT 783 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPL 456 EMNQ E L L+ +LRKALE D+ V+HYQP+ G + EAL+RWQ P++GL+ P Sbjct: 784 KEMNQYAQERLELELDLRKALERDEFVLHYQPQFDPNGRIIGCEALIRWQHPDKGLLSPG 843 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQ 515 +FI+ AE +GLIVP+G+WVI Q W +G L ++VN+S RQ + +K Sbjct: 844 EFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQFLHHDLLETVKN 903 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 + +++ELTES ++ N E + + S LG + +DDFGTGYSS+S L RF Sbjct: 904 AITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGTGYSSMSCLKRF 963 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P++ +K+DQ FVR + + ++V++I+ +A ALNL VIAEGVE+ ++ FL + E Sbjct: 964 PVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQLEFLKSSRCEE 1023 Query: 636 RQGFLFAKPMPAVAFERWYK 655 QG+ F++P+ A E++ + Sbjct: 1024 FQGYYFSRPILAADIEQYLQ 1043 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 861 bits (2225), Expect = 0.0, Method: Composition-based stats. Identities = 185/561 (32%), Positives = 292/561 (52%), Gaps = 12/561 (2%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 L A + +++ D+ G I R N+ TG +VIG++ L R + Sbjct: 452 AKQQLRIAATAFE-SQEGMLVTDAVGAILRVNQAFTRITGYTADEVIGKNPRILNSGRHD 510 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 A + R+G +E E+W G +G N + + + DIT Sbjct: 511 AYFYKEMWERIKRTGE-WEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVNYVATLMDITA 569 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH--ADNNKVGVVYLDLDNFKKVNDA 283 + ++E +R LA D +T LPNR +QD + A+ ++++DLDNFK +ND Sbjct: 570 SKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILFIDLDNFKNLNDT 629 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ------SALEAMASRI 337 GH GD LL V++ + SC+ +AR GGDEF+V+ + S E++ S+I Sbjct: 630 LGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLEDLSDNILDAAEQTESVGSKI 689 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L L +P+++G+ S S+G L ++ + +++ AD AMY AK+ GR F P Sbjct: 690 LASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIAMYQAKKAGRNTMRFFDP 749 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLD 457 M Q + L L+ LRKA+E DQ ++YQ ++ EAL+RW PE GL+ P + Sbjct: 750 RMQQSLSARLALELELRKAIEKDQFQLYYQIQVDETHRPLGAEALLRWMHPEHGLMAPAE 809 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQ 515 FI AEE+GLIVP+G WV+ Q+ W + NL +++N+SA+Q ++ Sbjct: 810 FIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQVQA 869 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 + + + +ELTES L+EN + + + + G LDDFGTGYSSL L R Sbjct: 870 AVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYLKRL 929 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P+D +K+DQ F+++I ++V I+A+AQ++ + VIAEGVE+ ++ L + G N Sbjct: 930 PLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKGCNH 989 Query: 636 RQGFLFAKPMPAVAFERWYKR 656 QG+LF+KP+P FE+ R Sbjct: 990 FQGYLFSKPVPVEQFEKLLHR 1010 Score = 52.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 3/143 (2%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT-GLKEHDVIGQS 155 A + DL + I ++D G + N+ + + Sbjct: 321 QRLQATSNDLQESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAMLEAATLEEARQKK 380 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 + +AA + RV +G + +E I KG L + + N Sbjct: 381 LIDYVAPEDQAAFLALHRRVM--NGESAVLEFKITGLKGTLHHLETHATPMPDANGNISL 438 Query: 216 LICSGTDITEERRAQERLRILAN 238 L+ D+T A+++LRI A Sbjct: 439 LLGITRDVTASMHAKQQLRIAAT 461 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 859 bits (2222), Expect = 0.0, Method: Composition-based stats. Identities = 186/565 (32%), Positives = 303/565 (53%), Gaps = 7/565 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 + L V +H+ I+I D G+I N+ D +G E +++GQ+ L Sbjct: 782 ERKQTEDALRQGAAVFESSHNGIIITDLDGHILAANQAYADISGYTESELLGQNPRIL-N 840 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 S R++ R + +++ ELW G+ + + + Sbjct: 841 SGRQSRDFYRKMWANIKEAGSWQGELWNRRKNGEIYPTWLAVSAVRNDQGKATHYVGISS 900 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKK 279 D+++ R+ + LA+ D +T LPNR ++ + HA+ A + +VGV+YLDLD FK Sbjct: 901 DLSQLRQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQAKRHHNQVGVLYLDLDRFKN 960 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRIL 338 +ND+ G+ GD+LL ++ + + + +LAR GGDEFL++ + ++ A +A +L Sbjct: 961 INDSLGYQVGDELLVTLTERLTMHMRSEDLLARLGGDEFLLVLEHINEPEDSAIVARSLL 1020 Query: 339 TRLRLPFRIGL-IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L PF + E++ S+GI++ P G + +I+HAD AM+ AK GR + +T Sbjct: 1021 ETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHADAAMHQAKTLGRNTYHFYTE 1080 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPL 456 ++++ E+L L+ LR A+ +QL ++YQP++ G + EALVRWQ PERGL+ P Sbjct: 1081 DLSRASNEHLELENRLRHAITANQLRVYYQPQVDIATGHIIGAEALVRWQDPERGLVQPG 1140 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQ 515 FI AEE+GLI +G WV+ + Q +W D G+ L +AVN+S Q I + + Sbjct: 1141 QFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTLAVNLSPHQFLRGNIAGLISK 1200 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 VL E F +++ELTES L++ E + ++ ++ +DDFGTGYSSLS L RF Sbjct: 1201 VLAETGFPADRLELELTESALMQQGEDVIKMLHLLRAQDIRLAIDDFGTGYSSLSYLKRF 1260 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P+D +K+D+ FV DI + I+A+ L +V+AEGVE+ ++ FL G + Sbjct: 1261 PLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVLAEGVETREQLEFLQARGCDL 1320 Query: 636 RQGFLFAKPMPAVAFERWYKRYLKR 660 QG+L + P+PA FE+ K + R Sbjct: 1321 YQGYLTSPPIPAEEFEKLLKENMAR 1345 Score = 71.1 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 44/149 (29%), Gaps = 7/149 (4%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGN-IQRFNRLCEDYTGLKE 148 + + + RD + + A I++ DS N G Sbjct: 652 SEDITERKQAETALRDSEDRFR---SIFNNAIDGILLADSGTRKFIMGNSAIARMLGYSN 708 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 +++ + ++ + R + + G + Sbjct: 709 EELLQLGTEDIHP-EQDKEYYIAQFAMMVRGESTLSSNAVVKRKDGSVFYADIKASPLR- 766 Query: 209 SGKNEIFLICSGTDITEERRAQERLRILA 237 ++++L+ DITE ++ ++ LR A Sbjct: 767 -IGDKVYLMGFFRDITERKQTEDALRQGA 794 Score = 59.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 47/164 (28%), Gaps = 13/164 (7%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAH-SAIVILD-SRGNIQRFNRLCEDYTGLKEHDVIG 153 H R ++ + + I + N D G D++ Sbjct: 402 LHRMELANRSSEQDKQL--KLFYDLPFIGMAITSPATKRWVYANDRLCDMLGYSRDDLLK 459 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 + L A + R+ + + +E G + + + + Sbjct: 460 TAWIDLTHPDDVAGNLKEFERMVAGETDGFNIEKRFIRKDGSPITVNLDVKCTRRADGKP 519 Query: 214 IFLICSGTDITEERRAQERLR-ILANTDSITGLPNRNAMQDLID 256 ++ DIT+ ++ + LR A R+ ++++ Sbjct: 520 DLIVALVDDITQRKQTELALRAKEATY--------RSLFDNMLN 555 Score = 49.1 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 52/153 (33%), Gaps = 23/153 (15%) Query: 95 AWHDTPAVARDLSHGLSFAE----QVVSEAHSAI----VILDS----RGNIQRFNRLCED 142 A D + L E + + + +I N Sbjct: 524 ALVDDITQRKQTELALRAKEATYRSLFDNMLNGVAHYRMIFRDGAPVDYEFIAVNPAFGK 583 Query: 143 YTGLKEHDVIGQSVFKLFMSRREA-AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 TGLK DV+G+ V ++ EA S + ++G A E ++ L + Sbjct: 584 TTGLK--DVVGRKVSEVIPGYCEANQDSLQVFGKVAQTGEACHWEHYL-----SALGKWF 636 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + ++S + + DITE ++A+ LR Sbjct: 637 SFSIYSPAPGE---FVVVSEDITERKQAETALR 666 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 859 bits (2220), Expect = 0.0, Method: Composition-based stats. Identities = 202/583 (34%), Positives = 313/583 (53%), Gaps = 18/583 (3%) Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF 136 VH + + R+ A +AS L AE+V+ + +++ D+ I Sbjct: 282 VHELHDALRARDLALSAS------------QRDLYLAEKVIESSLEGVMVTDAHARILSV 329 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR 196 N TG +V+G + L R+ A R G ++ E+W G+ Sbjct: 330 NPAFTRMTGYAPEEVVGLNPSVLNSGRQSPAFYARMWDGLLGDGQ-WQGEVWNRRKTGEV 388 Query: 197 LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLID 256 + TDI+ + + R+R LA D +TGLPNR + D + Sbjct: 389 YPQLLHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRLLDDRLQ 448 Query: 257 HAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPG 314 + HA ++ V+++DLD FK++ND+ GH GD+LL +++ + + L D +AR G Sbjct: 449 VELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTVARMG 508 Query: 315 GDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAI 373 GDEFLV+ +N S MA R++ LR P + E+ + SVG+A+ P+ D+ + Sbjct: 509 GDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRDADTL 568 Query: 374 IRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR 433 ++HAD AMY AK+ GR F +F P MN R E L L+T L +AL D+L +++QP + Sbjct: 569 VKHADVAMYRAKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPVMKAE 628 Query: 434 G-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-I 491 G E+ ++EAL+RW+ P+ GL+ P DFI AE++GLIVP+G WV+ +W + G Sbjct: 629 GGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCEAGGA 688 Query: 492 NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFS 551 L + VNISARQ ++ + VL E + +ELTES L+++ + AL+ + Sbjct: 689 PLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARLDHLR 748 Query: 552 QLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALN 611 LG + +DDFGTGYSSL+ L RFPID +K+D++FVR I + +LV AIV++ +L Sbjct: 749 ALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLGHSLG 808 Query: 612 LQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 L+V+AEGVE+A L + G + QGF F+ P+P F + Y Sbjct: 809 LRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEFVKAY 851 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 858 bits (2219), Expect = 0.0, Method: Composition-based stats. Identities = 203/570 (35%), Positives = 305/570 (53%), Gaps = 8/570 (1%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A W D R + L V+ H +V+ D G I NR + TG +V+ Sbjct: 383 AGVWIDITE-QRQATELLRLNSAVIESTHDGVVLTDLDGAIVAVNRAFTEVTGYSRDEVV 441 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 GQ+ L R + + + ++ ELW G+ + + Sbjct: 442 GQNPRFLQSGRHD-RGFYLSMWAALKEAGHWQGELWNRRKNGELFPEWLTLNAVRNEVGH 500 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVV 270 + TDI++ ++ ++RL LA+ D +T LPNR + ++HA++ A +V V+ Sbjct: 501 VTHYVGVFTDISKLKQTEDRLDYLAHHDPLTDLPNRLLVLSRLEHALDGAQRRGCRVAVM 560 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL 330 +LDLD FK VND+ GH GD+LLR V+ + L + L R GGDEF+VL + A Sbjct: 561 FLDLDRFKTVNDSLGHAAGDELLRAVAARLRGALREEDTLGRLGGDEFMVLLEHVEAPAD 620 Query: 331 EAM-ASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 A+ A ++ L PF + EV+ S+GI+ P+ G D ++R+AD AMY AK G Sbjct: 621 AAVVAKNLVEVLAAPFALSNGHEVFIRASIGISFYPDDGDDFMTLVRNADAAMYRAKAQG 680 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQS 447 R + +T ++ + E L L+T LR+ALE+D+ V++YQP + + G + EALVRW+ Sbjct: 681 RNTYGFYTEDLIRSATERLALETRLRRALEHDEFVVYYQPVLGVKDGRLLGAEALVRWKP 740 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLAD 506 ++ P FI AEE+GLIV LG WV+ D RQV +W D G +VAVN+SA Q Sbjct: 741 QGEPMVSPAAFIPVAEETGLIVALGEWVLRDACRQVREWIDAGYAFGQVAVNLSAEQFRR 800 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 Q + L VL E +++E+TES L+E E A+ ++++ Q G + +DDFGTGY Sbjct: 801 QDVSAMLATVLAETGLPATQLELEITESSLLEAGEHAVGLLERLKQQGVGLAIDDFGTGY 860 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSL+ L RF ID +K+D+ FV+DI ++ AIVA+A+AL++ V AEGVE + Sbjct: 861 SSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAIASAIVAMARALDMAVQAEGVEGEAQLE 920 Query: 627 FLTKNGINERQGFLFAKPMPAVAFERWYKR 656 L G QG+L + P+PA FE + R Sbjct: 921 LLRGLGCGSYQGYLCSPPLPADEFEARFLR 950 Score = 53.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 8/112 (7%) Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 TG + + Q + + + + R R G Y E I G ++ Sbjct: 308 TRMTGFSVAEALAQGWWARTVHPDDLERASRAVRAVEEDG-HYVHEYRIRCADGGVRWIR 366 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL-----ANTD--SITGL 245 G + + DITE+R+A E LR+ + D +T L Sbjct: 367 DELRAVRDEGGRVVRVAGVWIDITEQRQATELLRLNSAVIESTHDGVVLTDL 418 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 856 bits (2214), Expect = 0.0, Method: Composition-based stats. Identities = 199/566 (35%), Positives = 303/566 (53%), Gaps = 6/566 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + L + + AI+I D +I N + TG D+ G+ Sbjct: 646 QDITARKKQEDALRLYASIFEHSGEAILIADQARHIIAVNPAFTNLTGYALDDIRGEEPT 705 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L + + S R+ ++ E+ G + V + + Sbjct: 706 IL-AGGQASEESYRSTWASLEQTGYWQGEIIDRRKDGTLYPKWMAVSVVRDADGVLTHYV 764 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDH--AINHADNNKVGVVYLDLD 275 S TDITE + A+ +++ LA D +TGL NR ++Q +D A+ + + VV+LDLD Sbjct: 765 ASFTDITERKLAEAQIKHLAYHDPLTGLSNRFSLQTQLDQTLALARREQRTLAVVFLDLD 824 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMA 334 FK +ND+ GH GDQLL +V+ + + ++AR GGDEF+V+ + +A +A Sbjct: 825 RFKSINDSLGHALGDQLLVEVARRLRDNVRDSDIVARLGGDEFVVVLTEVGDAAGAARVA 884 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 ++L L +RIG ++T+ S+GI+L P G D+ A++++ADTAMY AK GR Sbjct: 885 DKLLGALVPRYRIGGHALHTTASIGISLYPHDGDDADALMKNADTAMYHAKSQGRDNVQF 944 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLI 453 FTPEMNQ V + L D +LR A+E Q +HYQP+I G V +EALVRWQ P GL+ Sbjct: 945 FTPEMNQSVLKRLQFDHDLRVAVEAGQFELHYQPQINSTSGRVVKVEALVRWQHPREGLV 1004 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTA 512 P +FI AEE+GLI+PLG WV+ + RQ+ WRD GI +L VAVN+SA QL + Sbjct: 1005 SPAEFIPIAEETGLILPLGEWVLNEACRQLRLWRDAGITDLTVAVNLSAHQLHSPALIPM 1064 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + + L E + +E+TES + + +++ +Q LG + +DDFGTGYSSLS L Sbjct: 1065 VARTLGNHGLEGADLCLEITESVAMRDTTASIAQLQALRDLGIHLSIDDFGTGYSSLSYL 1124 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 PID +KLDQ FV +I P ++ A +A+A +L L+V+AEG+E+ + L + Sbjct: 1125 KLLPIDTLKLDQSFVCEIEFNPSDVAICAATIALAHSLGLEVVAEGIETETQRRLLASHR 1184 Query: 633 INERQGFLFAKPMPAVAFERWYKRYL 658 + QG+LF+ P+PA + + Sbjct: 1185 CDFMQGYLFSAPLPAERALAYIREQQ 1210 Score = 86.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 4/140 (2%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + +R+L + ++ A + +V+LD G I+RFNR CE T +V G+ V+ Sbjct: 393 EVEKRSRELRELSALQGAILEHAGALVVVLDREGRIRRFNRACEALTQYSFSEVEGRQVW 452 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVEL---WIPTCKGQRLFLFRNKFVHSGSGKNEI 214 V F L W+ G+RL + N +H GK E Sbjct: 453 DFIPPEERRIVQDEAFAVLFNDPEQSRSTLTNHWVARDGGRRLIEWSNSVLHDAQGKVE- 511 Query: 215 FLICSGTDITEERRAQERLR 234 F++ G D+T++ RA+ L+ Sbjct: 512 FVVAVGNDVTDKMRAEAALK 531 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 196/562 (34%), Positives = 302/562 (53%), Gaps = 5/562 (0%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + + + A V ++I D I N + T ++G++ Sbjct: 317 EDISARKQSEEAQQLALTVFDSMLEGVIITDHHRRILAVNAAFGEITRYPVEALLGRTPP 376 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 + ++AA RR R SG +E ELW G L+ + + Sbjct: 377 LWRTAHQDAAFYRRIWRQLLASGR-WEGELWHRKRDGTPFPLWLSISCVRDEQGRPRQYV 435 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLD 275 DI++ + +QE+L LA+ D +TGLPNR+ ++HA+ A + + V+++DLD Sbjct: 436 FVFNDISQLKDSQEQLERLAHYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLD 495 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS 335 FK +ND+ GH GD+LL ++ + L + LAR GGDEFLV+ + ++A Sbjct: 496 RFKTINDSLGHQAGDELLVAIAQRLHQRLRQEDTLARLGGDEFLVVIEEAPVQQVASIAH 555 Query: 336 RILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 +L + PF G E Y S+GI+L P G ++ +IR+AD AMY AK G + Sbjct: 556 ALLKVVDQPFGFSGGGEAYVGASIGISLYPGDGRSASELIRNADAAMYLAKAQGSNAYRF 615 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 +T + + E L ++T+LR+AL ++ V+HYQP + G V E LVRWQ P L+ Sbjct: 616 YTESLTRAANERLSMETSLRRALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALV 675 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTAL 513 PP FI AEE+GLIVPLG WV+ + RQ W D G+ L +AVN+S RQ + + Sbjct: 676 PPSRFIPLAEETGLIVPLGDWVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQV 735 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 ++ LQ +++ELTE L+E E A+ + +LG + +DDFGTGYSSL+ L Sbjct: 736 RKALQGSGLPPAQLELELTEGALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLK 795 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RFP+D +K+D+ FVRD+ + +V I+A+ + L L+ +AEGVE+ ++ AFL + G Sbjct: 796 RFPLDKLKIDRSFVRDLPRDSSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGC 855 Query: 634 NERQGFLFAKPMPAVAFERWYK 655 + QG+LF+ P+PA AFERW + Sbjct: 856 DSGQGYLFSPPLPAEAFERWLR 877 Score = 82.6 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 14/217 (6%) Query: 34 TTETTEPDRTLQLSAEQAA-RIREMTVITSSLM---MSLTVDESDLSVHLVGRKIN---- 85 T +R L A R R TV+ + L S+ + V +++ Sbjct: 117 PASETRTERGTLLQRVAAGDRARVATVLDAMLAEGSGSVEFCRAGTGAAPVWLRLHYQVH 176 Query: 86 -KREWAGNASAWHDTPAVARDLSHGLSFAEQVV----SEAHSAIVILDSRGNIQRFNRLC 140 E G +V + L EQ+ +A I L G+ R N+ Sbjct: 177 LDEEAPGLVLGVLQDISVQKAQDDALREREQLFRGTFEQAAVGIAHLGLDGHWIRVNQRL 236 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 D G +++ ++ + + + R+ ++ +E +GQ ++ Sbjct: 237 CDILGYSREELLRLTLQDITHPADQDSDLVMTRRLLSGEIPSFSIEKRYRQRRGQLVWAN 296 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + G + I DI+ ++++E + LA Sbjct: 297 LTAALMRDEGGRPEYFILVVEDISARKQSEEA-QQLA 332 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 191/581 (32%), Positives = 313/581 (53%), Gaps = 9/581 (1%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS---RGNIQRFNRL 139 + A + H L E+ + + +AI+I + ++ N Sbjct: 363 DDRTAQLRTVNDDLIADIAARKHAEHELQLRERAIEASANAIIIARAVAPDYPLEYVNPA 422 Query: 140 CEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFL 199 TG + +G+++ L+ E + + V L G + Sbjct: 423 FTRITGYSPEEALGRNIGFLWGKDWEQPGIEELRSIALEKREGHAV-LRNYRKDGALFWS 481 Query: 200 FRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI 259 + + DIT +R + L N D++TGL NR+ ++D + AI Sbjct: 482 DLYIAPVKDDTGEVSHFVVALYDITATKRYESELEFQTNRDALTGLANRSLLRDRLSQAI 541 Query: 260 NHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDE 317 ++A + + + ++DLD FK VND GH GD LL+ ++ + + ++R GGDE Sbjct: 542 SYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRDTDTVSRMGGDE 601 Query: 318 FLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRH 376 F+++ + L + RI+ + P I E + S S+G+A+ P G +I+H Sbjct: 602 FVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPNDGVTPEELIKH 661 Query: 377 ADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GE 435 AD AMY AKE GR F +T MN+R E L L+ +LR A+E + ++HYQP++ R G+ Sbjct: 662 ADIAMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAMERGEFILHYQPQLDLRTGK 721 Query: 436 VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLR 494 + +EAL+RWQ PE G+IPP+ FI AEE+GLIVP+G WVI + RQ W++ G+ +LR Sbjct: 722 IVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNKVWQEHGLGSLR 781 Query: 495 VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLG 554 ++VN+SARQ A Q + ++ L+E +++ELTES ++ + + A+ ++++ LG Sbjct: 782 MSVNLSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHAIGILRELKALG 841 Query: 555 AQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQV 614 Q+ +DDFGTGYSSLS L RFPID +K+D+ FV DI P ++V +I+++A +L L V Sbjct: 842 VQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASIISLAHSLRLTV 901 Query: 615 IAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 IAEGVE+ ++ A+L ++ ++ QG+ F++P+ A A E K Sbjct: 902 IAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLK 942 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 852 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 193/645 (29%), Positives = 317/645 (49%), Gaps = 21/645 (3%) Query: 22 RLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVG 81 R ++ + +L + L+L + I + V + LT + HL Sbjct: 93 RESDQAALLSALRCTQMQYKSYLRLPIDHCGVIVLLAVEIPKTSLPLTTMLQPVLAHL-- 150 Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCE 141 A + R L E V ++S ++I D++GNI N Sbjct: 151 --------AKAIVLCRNNDVHTRGLIDQRDLLETVFESSYSGVMITDAKGNIVEVNPAFT 202 Query: 142 DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 TG + +V G++ L R + R +G +E E+W G+ + Sbjct: 203 RITGYQSEEVQGRNPHLLASGRHDHTFYREMWDDILANG-HWEGEIWDRRKNGEVYPSWM 261 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA--I 259 N N ++ + +D+T+ + A+ ++ LA D +T LPNR + + + A + Sbjct: 262 NINPVRDISGNLLYYVGIFSDVTKRKEAEAQIHQLAFYDPLTELPNRRLLNERLQQAFSV 321 Query: 260 NHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL 319 + V++LDLDNFK +ND GH GDQLL +V+ + SC+ + +AR GGDEF+ Sbjct: 322 GARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRNGDTVARLGGDEFV 381 Query: 320 VLA------SNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAI 373 V+ + + + + +A +I L P+++ T+ S+G+ + H + Sbjct: 382 VVLESLSSVPDEAATQADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMFRGHQQSLEEV 441 Query: 374 IRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR 433 ++ ADTAMY AK GR + P M + L+ LR+ +E +QL ++YQ ++ Sbjct: 442 LKFADTAMYQAKTAGRNAIRFYDPVMQASIEARAELEEELRQVVERNQLRLYYQVQMDSS 501 Query: 434 GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-- 491 E L+RWQ PERGL+ P FI AEE+G IVP+G WV+ Q+ W+ + Sbjct: 502 NRPLGAEVLLRWQHPERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQLKVWQSDPLTC 561 Query: 492 NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFS 551 +L +AVN+SA+Q + +++ L + + + +ELTES ++EN E ++ +++ Sbjct: 562 DLTLAVNVSAKQFRSMDFVSQVQRTLAQSGAKPSLLKLELTESLVLENVEDTIAKMRELK 621 Query: 552 QLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALN 611 LG +DDFGTGYSSL L R P+D IK+DQ FVRDI ++V+ I+A+++ L Sbjct: 622 LLGVSFSMDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQTIIAMSEVLG 681 Query: 612 LQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 L VIAEGVE+ + FL G + QG+LF +P P FE ++ Sbjct: 682 LNVIAEGVETEAQREFLDLRGCHAFQGYLFGRPAPLAEFEAILRK 726 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 852 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 198/616 (32%), Positives = 322/616 (52%), Gaps = 11/616 (1%) Query: 49 EQAARIREMTVITSSLMMSLTVDESDLSV-HLVGRKINKREWAGNASAWHDTPAVARDLS 107 +Q + ++ VI++ +D D+ + H V + IN + + R + Sbjct: 79 KQLNKEAKIIVISAHNDTGHIIDAIDIGINHYVLKPINHNKLRAVIGQCMTSIKWERQIR 138 Query: 108 HGLSF---AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 F + V ++ AI+I D+ G I+ N TG + IG+ L S Sbjct: 139 EQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRFTQLTGYTSAETIGKKPHIL-KSGE 197 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 R G + E G+ + + + + I DIT Sbjct: 198 TPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWASASISPITNGNEQITHFIAFQEDIT 257 Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVND 282 E ++A+E ++ +A D++TGLPNR+ +L+ A+ A + + V++LDLD FK +ND Sbjct: 258 ERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALAQAHRHNRLLAVLFLDLDRFKHIND 317 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHD-QVLARPGGDEFLVLASNTSQ-SALEAMASRILTR 340 GH GDQLL+ + + C D +AR GGDEF++L + +A +I+ Sbjct: 318 TLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDEFIILLPDIDDVQEAVRVAQKIIDA 377 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 F + IE++ S +GI++ P G D+ +I++AD AMY AKE GR ++ ++T M+ Sbjct: 378 FTQVFVLPDIELFISTCIGISIFPNDGRDTETLIKNADMAMYRAKEQGRSRYHLYTSSMD 437 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFI 459 ++ F L ++ +LRKAL+ ++ ++YQPK+ G++ LEALVRWQ+PE GLI P FI Sbjct: 438 EQAFRRLTMENSLRKALQREEFSLYYQPKVNIKTGQIVCLEALVRWQNPEMGLILPNQFI 497 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQ 518 AE++GLI+PLG WV+ Q W+ +RVAVN S RQ + ++Q+L Sbjct: 498 PLAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPPMRVAVNFSPRQFQQPRLTDMVEQILG 557 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 E + C +++ELTE+ +++N E + + + S LG + +DDFGTGYSSLS + + PI Sbjct: 558 EADLAPCWLELELTENVMLQNVEKTVQTLNRLSNLGIHISIDDFGTGYSSLSYIKKLPIQ 617 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+D+ FV DI+ ++ A++ +AQ+L L VIAEGVE+ ++ L E QG Sbjct: 618 TLKIDRSFVHDINTNADDAAIAIAVITMAQSLRLNVIAEGVETLEQMKLLDGLNCPEMQG 677 Query: 639 FLFAKPMPAVAFERWY 654 +LF+KP+P Sbjct: 678 YLFSKPLPVAEMTTLL 693 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 852 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 208/648 (32%), Positives = 338/648 (52%), Gaps = 15/648 (2%) Query: 12 NFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVD 71 + + +P ++R + + AE AR +E+ + + + Sbjct: 97 DLIHKEDPKEVF-----LMRVAAMGRFIETQNAHREAEAHARQKELQA--AEQLRRIEEQ 149 Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 V + E + + AV GL +V AI++ D +G Sbjct: 150 ARQQLEQRV--RERTLELTQSNERLSNEVAVRMRAESGLRLIHKVFENTSEAIILTDPQG 207 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 I N + TG + +G + R +A R G ++ E+W Sbjct: 208 MILDINPAFTEITGFSREEALGHNPRSFKSDRHDATFYTNMWRKIAEEG-FWQGEIWDRR 266 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G+ I +DI+E + + +L LA D++T LPNR Sbjct: 267 KNGEIYPKRLTINAVRNQAGEVENYIGIFSDISESKATELKLERLAYYDALTQLPNRMLF 326 Query: 252 QDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 D ++H +A ++ V V ++DLD FK+VND GH GD+LL+ V+ + C+ Sbjct: 327 HDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVRAADT 386 Query: 310 LARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGS 368 +AR GGDEF V+ ++ S + + +A ++L L+ I +++ S+GIAL P++G+ Sbjct: 387 VARMGGDEFTVILADISDNESVARVARKVLEELQKSISIKGHDIFVGASIGIALYPDNGN 446 Query: 369 DSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQP 428 D + ++AD AMY AKE GRG + F+ EMN + L L++ L A+ + L ++YQP Sbjct: 447 DVETLTKNADMAMYRAKESGRGNYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEVYYQP 506 Query: 429 KITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW- 486 K+ G + +EALVRW + +IPP+ FI AEE+GLIVPLGR V+ + A+W Sbjct: 507 KLNMQSGIMVGMEALVRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDCARWV 566 Query: 487 RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSV 546 R+ G+NLRVAVN+SAR+ + ++Q L E + +VE+TES ++ + E A++ Sbjct: 567 RETGMNLRVAVNLSAREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVENAIAT 626 Query: 547 IQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAV 606 ++Q S+LG + +DDFGTGYSSLS L +FPI ++K+D+ FV+DI P +V AI+++ Sbjct: 627 LEQISRLGIHIAMDDFGTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAAILSL 686 Query: 607 AQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 A+ LNL+V+AEGVE+ ++ +FL +N +E QG+ F+KP+ AV F + Sbjct: 687 AKVLNLKVVAEGVETQEQLSFLRQNLCDECQGYSFSKPLSAVDFTAFL 734 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 850 bits (2197), Expect = 0.0, Method: Composition-based stats. Identities = 192/561 (34%), Positives = 295/561 (52%), Gaps = 13/561 (2%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + L A + + ++I D+ IQR NR + TG + +GQ+ L Sbjct: 265 RKQSEEQLRIAAAAFE-SQTCMIITDANRVIQRVNRAFIETTGYSAEEAVGQTPRLLQSG 323 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 R A R R+G A++ E+W G+ + + G+ I + D Sbjct: 324 RHGADFYREMWETIHRTG-AWQGEIWGRRKNGEVYPKWLSISAVVGTNGRVSHYIGTHND 382 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDLDNFKKV 280 ITE ++A+ER+ LA D +TGLPNR + D + I + ++ ++++DLDNFK + Sbjct: 383 ITERKKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGALLFIDLDNFKTL 442 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS------QSALEAMA 334 ND GH GDQLL+ V+L + C+ +AR GGDEF+V+ +N + E +A Sbjct: 443 NDTLGHDVGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTNDKEAAQDTETVA 502 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 +IL L +++G + ++S S+G L +++ AD +MY AK GR Sbjct: 503 EKILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMYKAKAAGRNAVRF 562 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIP 454 F P M V ++ +L +AL Q ++HYQ ++ + E L+RWQ P+RG++ Sbjct: 563 FDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGE-RLTGAEVLLRWQHPQRGMVS 621 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTA 512 P +FI AEE+GLI+PLG WV+ Q+A+W R + +L +AVN+SA Q Sbjct: 622 PAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVSAHQFRQNDFVDQ 681 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + VL++ + +ELTES L+EN E + + G LDDFGTGYSSLS L Sbjct: 682 VLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLDDFGTGYSSLSYL 741 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 R P+D +K+DQ FVRD+ S+ R IVA+A +L L VIAEGVE+ + FL +G Sbjct: 742 KRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVETEAQRDFLASSG 801 Query: 633 INERQGFLFAKPMPAVAFERW 653 + QG+ F++P+P FE + Sbjct: 802 CHTYQGYYFSRPLPIEDFESF 822 Score = 76.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 13/141 (9%) Query: 105 DLSHGLSFAE----QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 L L +E A++I D+ G I N+ E G +++G+S+ L Sbjct: 11 RLEQALRTSEARLHSFFDATPDALLISDAHGTITMANQQVEKLLGYVAAELVGKSIEDLV 70 Query: 161 MSRREA-----AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 +R +A + + R GN + G + + +F Sbjct: 71 PNRFKASHPVLRSEFTASPRARRMGNGMA--VKARRKDGSECDVDVSLSRIETDEG--MF 126 Query: 216 LICSGTDITEERRAQERLRIL 236 + DI+E +R +E LR Sbjct: 127 FASALRDISERKRKEEELRRQ 147 Score = 49.1 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 69/236 (29%), Gaps = 30/236 (12%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDES 73 L + + +S + L + + + P L +E A R + + + D S Sbjct: 53 LLGYVAAELVGKSIEDLVPNRFKASHPV----LRSEFTASPRARRMGNGMAVKARRKDGS 108 Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF---AEQVVSEAHSAIVILDSR 130 + V + +I E ASA D R + I + D+ Sbjct: 109 ECDVDVSLSRIETDEGMFFASALRDISERKRKEEELRRQNGVLSTIFQSFPGGITLFDAD 168 Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE---- 186 + FN + L LF + R G + Sbjct: 169 LRLVAFNDQFKALLDL---------PDVLF--EQPEPDFETLIRYNAARGEYGPGDPEQQ 217 Query: 187 ---LWIPTCKG-----QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + T K +R+ G + TDIT+ ++++E+LR Sbjct: 218 VAAIIARTKKFVPHKIERVRPDGTSLSIRGVPLASGGFLSIYTDITDRKQSEEQLR 273 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 849 bits (2196), Expect = 0.0, Method: Composition-based stats. Identities = 198/591 (33%), Positives = 313/591 (52%), Gaps = 11/591 (1%) Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAV---ARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 L +H +G I R+ G S T + GL A+ + A AIVI D++G Sbjct: 676 LHIHALG--IVSRDSRGVPSQMVGTLQDVTRRKMAEEGLVLAKMIFDNAGEAIVITDAQG 733 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 +I N + G +++GQ+ L R + + G ++ E+W Sbjct: 734 DITDVNPAYQRIMGYTRDEIVGQNPSILKSGRHDEQFYEQMWNEMLSEG-HWQGEIWDRR 792 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G+ + + DIT+++ +E+L LA D +T LPNR Sbjct: 793 KSGEIFPKWLTIDAIRDEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELPNRALF 852 Query: 252 QDLIDHA--INHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 +D ++ ++ +G+ ++DLD FK VND+ GH GD LL V+ I L Sbjct: 853 RDRLEQEMRLSARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDT 912 Query: 310 LARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGS 368 +AR GGDEF V+ Q+ + +A I+ L F + EV+ S+GIA+ P+ G Sbjct: 913 VARLGGDEFTVILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGE 972 Query: 369 DSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQP 428 D + +HADTAMY AKE GRG + FT +MN+ L L+ LR+A+E +QL +HYQP Sbjct: 973 DYETLTKHADTAMYRAKEEGRGTYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHYQP 1032 Query: 429 KITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW- 486 K+ + + +EALVRW PE+GL+ P+DFI AEE+GLI+ +G WV+ + Sbjct: 1033 KVDVKQCRITGMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLA 1092 Query: 487 RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSV 546 R L+VA+N+SA+Q D + L++ LQ+ ++VE+TES + + + Sbjct: 1093 RSSRHPLQVAINLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQ 1152 Query: 547 IQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAV 606 I + LG +V +DDFGTGYSSLS L + P++A+K+D+ F++D++ ++V +I+++ Sbjct: 1153 IGELRALGVKVSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSM 1212 Query: 607 AQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 A AL L V+AEGVE+ + FL + QG+ F+KP+P AFE++ + Sbjct: 1213 ASALGLSVVAEGVENQAQIHFLCEKECPTIQGYFFSKPLPFEAFEKFLLDW 1263 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 849 bits (2194), Expect = 0.0, Method: Composition-based stats. Identities = 181/580 (31%), Positives = 312/580 (53%), Gaps = 6/580 (1%) Query: 79 LVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNR 138 L + N + AW D L +V + IVI D I N Sbjct: 749 LTLTRDNNGKPLEIVGAWLDIT-DRLSAEEKLRLNAKVFESSRDGIVITDKNNKIISVNN 807 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF 198 TG + +V+G++ L + E + ++ E+ G+ Sbjct: 808 AFTTITGYEAKEVVGKNPHMLASEKLE-ESFYSAMWDSIGVMGYWQGEVINQRKNGEIYT 866 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 + + + I +DI+E + A+ER++ L+N D +T LPN+N + D A Sbjct: 867 QWLSISTIKDADGKISQHIGIISDISERKVAEERIQFLSNFDPLTNLPNKNLLNDRTKLA 926 Query: 259 INHADNNKVGV--VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGD 316 + A K V +++DLD FK +N++ G GDQ++++++ ++ + + + R GGD Sbjct: 927 LATAKRLKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVCRQGGD 986 Query: 317 EFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRH 376 EF++L NT +A ++L + PF ++ + S+GI+ P+ G + + Sbjct: 987 EFILLLPNTDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFEQLAQS 1046 Query: 377 ADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGE 435 AD A+Y AK GR F F +M+++ + L L++ LR A+E+++ +++YQP+ + Sbjct: 1047 ADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYDSKTSK 1106 Query: 436 VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LR 494 + LEAL+RWQ PE+GL+ P FI AEESGLI +G WV+ V+Q+A W++ G+ + Sbjct: 1107 IIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAGLGAVP 1166 Query: 495 VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLG 554 VAVN+S Q T++ ++ Q+L++ + +++ELTE +E+ E L+V+ Q + LG Sbjct: 1167 VAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQLNSLG 1226 Query: 555 AQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQV 614 ++ +DDFGTGYSSLS L +F ID +K+DQ FVR I P +++ AI+++A++L+ + Sbjct: 1227 VRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKSLSFKT 1286 Query: 615 IAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 IAEGVE+ ++ FL N +E QG+ F+KP+P+ + Sbjct: 1287 IAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVTKLL 1326 Score = 84.2 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 48/135 (35%), Gaps = 12/135 (8%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG-QSVFKLFM 161 +R L+ +++ +A +++LD + N + G ++ +++G + L Sbjct: 347 SRQLAESR--YQKLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLIN 404 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 + + N + + ++ G R N + + Sbjct: 405 NVTKHPEFNTNLISDIPTKDEWQY----RRKDGSRFIAEVNCRKLDKN-----YYFTIIR 455 Query: 222 DITEERRAQERLRIL 236 D+TE + A+ R+ L Sbjct: 456 DLTERKLAENRILHL 470 Score = 46.4 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 56/148 (37%), Gaps = 9/148 (6%) Query: 98 DTPAVARDLSHGLSFAE----QVVSEAHSAIVIL--DSRGNIQ--RFNRLCEDYTGLKEH 149 D + L L +A Q+V+ + + I L ++ G + TG + Sbjct: 637 DREQKKQKLMSELDYANKRINQIVNLSPAVIYTLKPNAEGIFHSDFISENIYQITGYAKD 696 Query: 150 DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS 209 + + + F L E A+ +++ + + G +++ + + Sbjct: 697 EWL-KDNFWLDHIHTEDLAAALDSKKILFETGSLNHQYRFMHANGGYIWIEDQLTLTRDN 755 Query: 210 GKNEIFLICSGTDITEERRAQERLRILA 237 + ++ + DIT+ A+E+LR+ A Sbjct: 756 NGKPLEIVGAWLDITDRLSAEEKLRLNA 783 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 848 bits (2191), Expect = 0.0, Method: Composition-based stats. Identities = 200/563 (35%), Positives = 318/563 (56%), Gaps = 10/563 (1%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 + R L A V + +AI++ D G I + N TG DV+ Q +L Sbjct: 843 SQQRRAERELRMAATVFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQP-RLL 901 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 + R+ A ++ + ++E E+ G+ + + + +C Sbjct: 902 TADRQEANQLKHVLASLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFF 961 Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFK 278 +DI+E + ++ R+ LA D++T LPNR QD + A+ A+ N V +++LDLD FK Sbjct: 962 SDISERKASERRIHRLAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFK 1021 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE-----AM 333 +ND+ GH GD++L++V+ + +C+ D +AR GGDEF +L + + + Sbjct: 1022 PINDSLGHAAGDRMLQEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQV 1081 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 A IL RL PF + E + + S+G+ALSP+ G++ + ++++ADTAMY AKE G+ F Sbjct: 1082 AELILGRLARPFTLEGREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQ 1141 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGL 452 + EMN R E L L+++LR+ALE + V+HYQP+ T G + EAL+RWQ P RGL Sbjct: 1142 FYQAEMNARALERLELESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGL 1201 Query: 453 IPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFT 511 +PP +FI EE GL+ +G W++ + +Q+ W + + +V+VN+SARQ AD + Sbjct: 1202 VPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGE 1261 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 + +L E +++ELTES L+ + A+ ++ +LG + +DDFGTGYSSL+ Sbjct: 1262 RIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNY 1321 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L +FPID +K+D+ FV + + RAI+A+A +LNL VIAEGVES + FL ++ Sbjct: 1322 LKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREH 1381 Query: 632 GINERQGFLFAKPMPAVAFERWY 654 G +E QG+LF +PMPA F Y Sbjct: 1382 GCDEVQGYLFGRPMPAEQFGMLY 1404 Score = 58.7 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 46/171 (26%), Gaps = 15/171 (8%) Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCE 141 R G A T L + I D+ N + + Sbjct: 688 RSGRVARLIGVAKDITFTVEANNALRENGRRYRMLAENISDVIFSTDAELNASYVSPSVQ 747 Query: 142 DYTGLKEHDVI--------------GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 G + G+ + L R A R+ + + L Sbjct: 748 HVFGYSPEWALLNGLHQTATNPRQLGR-LNGLLRRVRHAIGDRQKLAELRENPGQHLFAL 806 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 G+++ + + L+ DI+++RRA+ LR+ A Sbjct: 807 DCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAAT 857 Score = 43.0 bits (101), Expect = 0.039, Method: Composition-based stats. Identities = 15/135 (11%), Positives = 32/135 (23%), Gaps = 18/135 (13%) Query: 107 SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 L A ++ +++ + G + N E G+ + L Sbjct: 288 QRSLRQAATALAAIDERVLVTRADGRLSYLNPQAERLFGISSAQARQHHLLGLLPDLEPG 347 Query: 167 AASRRNNRVFFRSGNAYEVELWIPTCKGQ------------RLFLFRNKFVHSGSGKNEI 214 EL +G+ ++ + Sbjct: 348 ------WLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQAWTLREQILQG 401 Query: 215 FLICSGTDITEERRA 229 + D+TEE+ A Sbjct: 402 GQVWVLRDVTEEQHA 416 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 847 bits (2190), Expect = 0.0, Method: Composition-based stats. Identities = 194/623 (31%), Positives = 325/623 (52%), Gaps = 18/623 (2%) Query: 51 AARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWA------------GNASAWHD 98 A + + I L + S L + + + + + G+ + Sbjct: 317 AGMLSHDSQIKRFLALPFYHHNSLLGIIGIANRDKPYDKSLINYLNPLLSTCGSILDAYH 376 Query: 99 TPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 ++ L +V ++I D++ + N TG+ +++G+ + Sbjct: 377 NDQRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTHITGIARSEIMGRHLST 436 Query: 159 LFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLIC 218 L +++E S + R +S ++ ELW G+ L+ S + + Sbjct: 437 L-QTKQEKPISFQRVRHAIKSTGQWQGELWSQRKNGEIYPLWVTANAVRNSKEEITHFVA 495 Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDN 276 +DIT ++ ++RL LA+ D++TGLPNR+ D ++HAI+HA + ++ V+++DLD Sbjct: 496 IFSDITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHAQRHHHRIAVLFIDLDR 555 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMAS 335 FK +ND GH GD LL+ V+ + + + +AR GGDEF V+ N T SA+ + Sbjct: 556 FKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTVIIENFTDTSAISLITQ 615 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 +I++ PF I E++ S S+G++L PE G +++ +++ AD AMY AK+ G+ F Sbjct: 616 KIISACEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADAAMYQAKKRGKSCCQFF 675 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIP 454 T E+N E L L LR+AL + ++YQP I G + S+EAL+RW PE GLI Sbjct: 676 TTEINTAATEQLALKNLLRRALARKEFQLYYQPIINMESGAIVSVEALIRWVDPELGLIS 735 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKW-RDKGINLRVAVNISARQLADQTIFTAL 513 P FI AEE+GLI+PLG WV+ Q W + +R+A+N+SARQL + Sbjct: 736 PNTFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAINLSARQLEQTDFSERV 795 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 ++L++ F +++ELTES LI E +L + ++G ++ LDDFGTGYS L+ L Sbjct: 796 SEILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRLSLDDFGTGYSPLAYLK 855 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RFPID +K+D+ FV+ I P ++ A+ +A +L VIA+GVE+ ++ FL + + Sbjct: 856 RFPIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAKGVETREQLNFLNEIKV 915 Query: 634 NERQGFLFAKPMPAVAFERWYKR 656 +E QG+ + P+PA + + Sbjct: 916 DEAQGYFISYPVPAEELTQKLRE 938 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 191/558 (34%), Positives = 306/558 (54%), Gaps = 5/558 (0%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + + L E A++I D+R I R N E TG +V+G++ L Sbjct: 401 RQKATAQLRLIETAFQHTRDAVLITDARARILRVNPAFETITGYSAGEVVGRTPRMLQSG 460 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 R + A RR R + + E+W G +++ G + + TD Sbjct: 461 RHDGAFYRRFWRA-LETEGHWSGEIWNRHRDGHIFPAWQSVSAVKGPDGSTTHYVSIFTD 519 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKV 280 I+E +RA+ ++R L+ D +TGLPNR Q +D I A D ++ +V LDLD FK + Sbjct: 520 ISEFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALVVLDLDRFKTI 579 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTR 340 ND+ GH GD+LL V+ I C +AR GGDEF+V+ +++ +A+ +++ Sbjct: 580 NDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILADSDAVRAARVANAMISA 639 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 + P G + + S+GI+L P DS ++I+ AD AMY AK GR + F+ EM+ Sbjct: 640 IAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHAKSLGRNTYQFFSAEMS 699 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFI 459 E L L+ L +AL N + ++YQP+I + LEAL+RW+ PE G +PPL FI Sbjct: 700 AVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHPEVGWVPPLRFI 759 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQ 518 AEE+G+I +GRWV+ + RQ +W+ G+ + VAVN+S QL ++ +L Sbjct: 760 PLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDDFPEQVEALLS 819 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 +++ELTE+ ++ + ++++ + G + +DDFGTGYSSL L RFP+D Sbjct: 820 GCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSSLGYLNRFPVD 879 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+DQ F+RD+ ++ ++ RAI+A+A+ L+L+V+AEGVE+A++ FL + G + QG Sbjct: 880 KLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEFLERAGCDGAQG 939 Query: 639 FLFAKPMPAVAFERWYKR 656 F F++P+PA W R Sbjct: 940 FYFSRPVPADEIAGWLSR 957 Score = 87.2 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 8/143 (5%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 + +++H+T L +V +++ D +G I+ +N+ E G ++ Sbjct: 149 DVTSFHET-------EEKLHRLAAIVESTGDTVIVSDLQGRIRTWNKGAERMWGYAAEEI 201 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 IGQ V L ++ + R E G+ + + Sbjct: 202 IGQPVTVLPPLAKQGEP-GQILRRVIDEHEVVRFESRGLHKDGRDFPISLTVSPLFDAEN 260 Query: 212 NEIFLICSGTDITEERRAQERLR 234 + DITE R + L+ Sbjct: 261 RLTGVSAIIRDITEMERLKATLQ 283 Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 5/147 (3%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH 149 + + + L L E V + S +V+LD + N R N Sbjct: 266 SAIIRDITEMERLKATLQERLKLVEMVFQYSVSCLVVLDPQFNFIRVNPAYARACRRDVA 325 Query: 150 DVIGQSVFKLFMSRREAAASR--RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 + G++ F+L+ S R R F + +G + + V Sbjct: 326 EFEGRNHFELYPSDARFIFEEVVRTRRPFEAVARPFT--FPDQPERGVTYWDWNLVPVLD 383 Query: 208 GSGKNEIFLICSGTDITEERRAQERLR 234 G G+ E +L+ S D+T+ ++A +LR Sbjct: 384 GKGEVE-YLLFSLVDVTDRQKATAQLR 409 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 846 bits (2188), Expect = 0.0, Method: Composition-based stats. Identities = 196/564 (34%), Positives = 306/564 (54%), Gaps = 6/564 (1%) Query: 101 AVARDLS-HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 A+ R + L+ Q V ++ ++IVI D NI+ N TG +V+G++ L Sbjct: 737 AIERAQTGAWLNKLSQAVEQSPNSIVITDLNANIEYANDAFVKTTGYTLPEVMGKNPRIL 796 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 S + + SG + EL G + + Sbjct: 797 -HSGKTTVETYAAMWTQLNSGQMWRGELINRRKDGTEYVELARISPLRHTDGRVTNYLSI 855 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNF 277 DITE+++ + R+R LA+ D +TGLPN+ ++D A+ A + + V++LD+D+F Sbjct: 856 KEDITEQKQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHF 915 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRI 337 K +ND GH GD+LL ++ + L + L+R GGDEF+++ +T +A +I Sbjct: 916 KNINDTLGHRIGDELLVHLAKRMKLLLRDEDTLSRFGGDEFILVLPDTDADGAAHVAEKI 975 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L + I E+ + S+GIA+ P G D + + AD AMY AK+ GR F FT Sbjct: 976 LETVAKTCYIEQHELVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTS 1035 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPL 456 EM R L L+ LR+AL +Q +HYQP+I+ + G++ EAL+RW PE G I P Sbjct: 1036 EMQARSARRLLLENALRQALSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPA 1095 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQ 515 +FI AEESGLI+ +G WV+ V+QV +W+D G + VA+N+SA Q + + Q Sbjct: 1096 EFIPVAEESGLILSIGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQ 1155 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 +L E N I++ELTES ++N +A+ V+ G ++ +DDFGTGYSSLS L +F Sbjct: 1156 ILHEANLAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKF 1215 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 ++ +K+DQ FVRD+ S+++V AI+ +A ++ Q IAEGVE+A + AFL G NE Sbjct: 1216 KVNKLKIDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNE 1275 Query: 636 RQGFLFAKPMPAVAFERWYKRYLK 659 QG+ F++P+ FE + + + Sbjct: 1276 VQGYYFSRPLTVALFEAFVLGHAE 1299 Score = 87.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 18/205 (8%) Query: 73 SDLSVHLVGRKINKREWAGNASAWHDTPAVARD-LSHGLSFAEQ----VVSEAHSAIVIL 127 D + L ++K A+ ++ ++ L H + AE +V I + Sbjct: 234 DDAGLVLGMVTLHKLMARIAATVMNEETLRRQESLEHSMHHAESQLRLIVKTIPDLIWLK 293 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 D G N + E + G E D++G++ + F+SR +A R ++R + E Sbjct: 294 DVEGVYLSCNPMFERFFGAIEADIVGKTDYD-FVSREQADFFRAHDRAAMLADKPSINEE 352 Query: 188 WIP-TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 W+ G R L K + I ++ DITE A +++ +T L Sbjct: 353 WVTFADDGHRACLETTKSPMFNAVGQLIGVLGIAHDITERLAAAKKIER------LTQLY 406 Query: 247 NRNAMQDLIDHAINHADNNKVGVVY 271 N + AI H+ + ++ Sbjct: 407 N---ALSQCNQAIVHSSSE--AELF 426 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 846 bits (2187), Expect = 0.0, Method: Composition-based stats. Identities = 214/650 (32%), Positives = 333/650 (51%), Gaps = 20/650 (3%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEP--DRTLQLSAEQAARIREMTVITSSLMMSLTVD 71 L + P + + F + E DR +SAEQ I + + +L Sbjct: 111 LLGYRPDEVIGRTP--FDFMPSGEAERVRDRFAAISAEQ-------EAIINLVNTNLHRQ 161 Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTP-AVARDLSHGLSFAEQVVSEAHSAIVILDSR 130 + + G + D V + L L + V VI D Sbjct: 162 GRRVILETSGVPFYDQHGTWQGYRGIDRDITVRQQLEEWLRQSAMVYENMWEGAVITDPA 221 Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIP 190 G I N TG + +VIG++ L R E A + R G + E+W Sbjct: 222 GTILDVNPAFSRITGYAKDEVIGKNPRILKSDRHEQAFYQHMWRELIEKGQ-WRGEIWNR 280 Query: 191 TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNA 250 G+ + + S + + + TD+++ ++++ +L LA D +T LPNR Sbjct: 281 RKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQLKQSEAKLESLAYYDPLTALPNRLL 340 Query: 251 MQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQ 308 + ++HA+ A+ + KVGV ++DLD F+ VN++ + GDQLL VS LSCL D Sbjct: 341 LHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNESLSYQAGDQLLVMVSKRFLSCLRVDD 400 Query: 309 VLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGL-IEVYTSCSVGIALSPEH 366 LARPGGDEF+++ + A +L L PF++ E+Y S+GI + P Sbjct: 401 TLARPGGDEFVLIQEALADPQEATETARELLASLDQPFQLDGGQEIYLGASIGITVFPGD 460 Query: 367 GSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHY 426 G+ ++++A+ AMY AKE GR +F + +MN L ++ LR+A+EN +L+++Y Sbjct: 461 GTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQMNADALARLQMEMALRQAVENRELLLYY 520 Query: 427 QPKITWRGE--VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 QP+ V EAL+RW++ E LI P FI AE+SGLI +G WVI + RQ+ Sbjct: 521 QPQWQLADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAIGDWVIDEACRQLR 580 Query: 485 KWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 WRD+G LRVAVN+SARQ + + Q L++ ++ELTES L+E E A Sbjct: 581 IWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTESILMEKPEEA 640 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 ++ + + LG + LDDFGTGYSSL+ L+RFPI +K+D+ FVRD++ + + + +I Sbjct: 641 AELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAALIADSI 700 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 +A+A + LQV+AEGVE+ ++ A+L G + QGFLF+ P+PA F + Sbjct: 701 IALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQFAEF 750 Score = 67.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 40/120 (33%) Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 ++ I +D+ G+ + + G + +VIG++ F S R + Sbjct: 86 ETSNDWIWEVDTSGSYTYVSPQVKTLLGYRPDEVIGRTPFDFMPSGEAERVRDRFAAISA 145 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + +G+R+ L + DIT ++ +E LR A Sbjct: 146 EQEAIINLVNTNLHRQGRRVILETSGVPFYDQHGTWQGYRGIDRDITVRQQLEEWLRQSA 205 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 846 bits (2187), Expect = 0.0, Method: Composition-based stats. Identities = 188/625 (30%), Positives = 320/625 (51%), Gaps = 14/625 (2%) Query: 49 EQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDL-- 106 E RI+E V ++ +T E D S++ ++ ++ W + L Sbjct: 92 EACKRIKENPVTAHIQVLIITSLEDDESINH-AYEVGASDYVPKPIHWVSLQNRVQFLYK 150 Query: 107 ----SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 L +V IV+ DS I N E TG V+GQ++ L Sbjct: 151 MMVAERQLMLTAKVFENTTEGIVVTDSTACITNVNPSFEAITGYDRGSVLGQNISILQSG 210 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 R + + + +G ++ E+W G+ + N + TD Sbjct: 211 RHDRRFYGKMWQTLLTAGK-WQGEVWNRRKNGEIYPQWVNISAIRTGDGQTESYVGVFTD 269 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKV 280 +T + ++E L L+ D++T LPNR D ++ + + + V V+ +DLD FK + Sbjct: 270 LTRIKESEENLLYLSGHDALTELPNRLLFHDRLNQTLVESADSGSIVAVLIVDLDRFKVI 329 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILT 339 ND+ GH GD LL +V+ + + LAR GGDEF ++ N +Q+ +A +LT Sbjct: 330 NDSMGHEVGDSLLCEVATRLRAICPAKATLARLGGDEFGIVLPNMTQNRDAALLAQEVLT 389 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 R+ P I +E S+G+ + P G + ++R+A++AMY AK+ GR F + E+ Sbjct: 390 RVAQPITISEVEFAVGASIGMTVYPLDGEKPSVLMRNAESAMYHAKQSGRNNFQFYRSEL 449 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDF 458 N + L++ LR A++ + ++ YQP++ G++ +EAL+RWQ PE+G++ P +F Sbjct: 450 NTASLARILLESGLRNAVDRQEFLLFYQPQMELATGKLIGMEALIRWQHPEQGMVSPGEF 509 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIFTALKQVL 517 I AEE+GL++P+G+W + + RQ W D+ G+ LR++VN+S Q + + + Sbjct: 510 IPLAEETGLVIPMGQWALKEACRQSKVWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTV 569 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 E +++ELTES + + E L + S+ G + +DDFGTG+SSLS L +FPI Sbjct: 570 GESGLPPHCLELELTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPI 629 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D +K+DQ FVR+ + P +++RA + +A +LNL+VIAEGVE ++ FL + +E Q Sbjct: 630 DTLKIDQSFVRNCTRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQ 689 Query: 638 GFLFAKPMPAVAFERW-YKRYLKRA 661 G+ + +P+ FE + + K+A Sbjct: 690 GYFYGRPLSGDKFEMFMLDAFAKKA 714 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 844 bits (2182), Expect = 0.0, Method: Composition-based stats. Identities = 195/573 (34%), Positives = 314/573 (54%), Gaps = 5/573 (0%) Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 + A+ + + + Q V ++ +AI+I D G I+ N TG Sbjct: 282 DLQLLETATHFLAIAIERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFSTNTG 341 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 HD+IG+ + S + + A+ + G +++ E G+ Sbjct: 342 YALHDIIGKKPN-MHKSGKTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLVRVSP 400 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN 265 + + DIT ++ AQ R+ LA+ D +TGLPNR + + A+ A+ + Sbjct: 401 VREADGRITHYLAIEEDITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLAEED 460 Query: 266 K--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 + + V++LDLD+FK +ND GH GD LL +++ + + L D L+R GGDEF++L Sbjct: 461 QATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVLLLP 520 Query: 324 NTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 ++ + + +A ++ + P+RIG E+ S+GIA+ P G D + ++AD AMY Sbjct: 521 GANRESAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVAMYR 580 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEAL 442 AK+ GR + FT EM YL + LR+A+ +QL +HYQP+I+ G+V EAL Sbjct: 581 AKQEGRNAYRSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGAEAL 640 Query: 443 VRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISA 501 +RW PE G I P +FI AEESGLI+ +G WV+ V Q KW G++ L +AVN+SA Sbjct: 641 LRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVNLSA 700 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 Q + + Q+L+E +F +++ELTE + + + A++++ + G ++ +DD Sbjct: 701 VQFRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMSIDD 760 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSLS L +F +K+DQ FVRDI +++V AI+ +A+ L LQ IAEGVE+ Sbjct: 761 FGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEGVET 820 Query: 622 AKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 A++ AFL + G +E QG+ ++KP+PA FE + Sbjct: 821 AEQQAFLREEGCHEAQGYHYSKPLPAADFETFI 853 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 844 bits (2182), Expect = 0.0, Method: Composition-based stats. Identities = 189/577 (32%), Positives = 294/577 (50%), Gaps = 14/577 (2%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK 147 E+ G ++ D + + L A + ++I D+ I R N + TG Sbjct: 452 EFIGFRTSGRDITE-RKQVEAELRIAAVAFD-SMEPMMITDASATILRVNSAFTECTGYT 509 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 +++GQ+ L R + A + +G ++ E+W G+ + Sbjct: 510 AEEIVGQTPRVLRSGRHDDAFFQEMWEEIHSAGG-WQGEVWDRRKNGEVYPKWLTISAVM 568 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKV 267 + + DITE + A+ER++ LA D++T LPNR + D + AI + N+ Sbjct: 569 SDNGTVSHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEA 628 Query: 268 --GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT 325 ++++DLD+FK +ND GH GD LL+ V+ + + +AR GGDEF+V+ N Sbjct: 629 CGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNL 688 Query: 326 ------SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADT 379 + + EA+ RIL L P+ +G IE TS S+G + H + +++ AD Sbjct: 689 HKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELLKQADL 748 Query: 380 AMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSL 439 AMY +KE GR F P+M V + L+ LR A+E++Q ++HYQ ++ V Sbjct: 749 AMYKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQVVGT-RVTGA 807 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAV 497 EALVRWQ P+RG++PP +FI AEE+GLIV LG WV+ Q+A+W R +L +AV Sbjct: 808 EALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAV 867 Query: 498 NISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQV 557 N+S +Q + ++ + +ELTES L++N + + + G Sbjct: 868 NVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVF 927 Query: 558 HLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAE 617 LDDFG GYSSLS L R P+D +K+D+ FVRD+ + R IVA+A++L L VIAE Sbjct: 928 ALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAE 987 Query: 618 GVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 GVE+ + FL G QG+ F +P+P FE Sbjct: 988 GVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFEALL 1024 Score = 52.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 47/148 (31%), Gaps = 5/148 (3%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH 149 G A A+ ++L + + + + G + N E Y G Sbjct: 329 TGRGRAMRLASAMTKELRENEEKFRAIADCTVNWEIWWGTDGKPRWINSAVEAYIGYTVD 388 Query: 150 DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV---ELWIPTCKGQRLFLFRNKFVH 206 + + ++ + A R F ++ E G ++L + Sbjct: 389 ECM--ALPDFAGTVIYPADIPRVAPEFQKALQGLRGDDLEFRCVRKDGSLMWLSASWVPI 446 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLR 234 + S I SG DITE ++ + LR Sbjct: 447 TDSKGEFIGFRTSGRDITERKQVEAELR 474 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 842 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 201/576 (34%), Positives = 301/576 (52%), Gaps = 8/576 (1%) Query: 86 KREWAGN--ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDY 143 E AG + + + A V + I+ D++G I N Sbjct: 449 PIEIAGRKLLYSIVRDVTERKRFEERMRQAMVVFKASSQGIMTTDAQGVITSVNPAFCTI 508 Query: 144 TGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNK 203 TG +VIG+ R EA SG ++ E+W G R + Sbjct: 509 TGYLAAEVIGRKSSMFKPERHEATFFDAMWTSIVESG-SWAGEVWSRRSDGDRYPQWVTI 567 Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD 263 + + +DITE ++ + + AN D +TGL NR+ +QD +D A+ HA Sbjct: 568 TAVRDTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLTGLANRSLLQDRLDRALAHAR 627 Query: 264 NN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL 321 + KVG+++LDLD FK +ND+ GH GD+LL DV+ + SC+ + +AR GGDEF V+ Sbjct: 628 RHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLNSCVRDEDTVARLGGDEFTVV 687 Query: 322 ASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 + ++ L A+A +++ LR PF + + S SVGI + P+ G D ++R+AD A Sbjct: 688 VHDLADRADLGAIADKLVAVLREPFALRGARHHISGSVGITVFPDDGDDVQTLLRNADIA 747 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSL 439 MY AK+ G+ + + P M + L+ +LR A+E +HYQP + G + Sbjct: 748 MYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQRAFELHYQPIVDCASGALVGA 807 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVN 498 EAL+RW+ PERG+I PL+FI AEE GLIVP+G WV+ +VVRQ W +G LR+ +N Sbjct: 808 EALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREVVRQRRDWLARGHPPLRLTLN 867 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 +S Q + + ++ +L E + E+TES L+ E + + + G Sbjct: 868 VSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMGGSENVEARMCDIKEQGICFA 927 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 LDDFGTG+SSLS L RFP+D +K+D+ FVRD +LV AI+ +A +L L+V AEG Sbjct: 928 LDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDATLVEAIINMAHSLGLRVTAEG 987 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 VESA++ FL G + QG+L KP+ A AFE Sbjct: 988 VESAEQREFLRALGCDYLQGYLIGKPLAADAFEALM 1023 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 67/208 (32%), Gaps = 5/208 (2%) Query: 27 SDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINK 86 S VL + L L+A + ++ M L +DL + R Sbjct: 28 SGVLVLG-LGHPGDNLGLSLNAAVVLLFSLLLGGLANQMAQLRAHRADLQRLVAAR---S 83 Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 E + +VA L + + ++IVI D G I+ N E TG Sbjct: 84 AEVRAREAELDRAQSVAHVGEQQLRKLSTAIECSPASIVITDRSGTIEYVNPQFERSTGY 143 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 +V+G++ L R +A G+ + E G + + Sbjct: 144 TAQEVVGKNPRILKSGNR-SADEYAAMWATITHGHVWRGEFENVRKDGAHYWERASIAPI 202 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLR 234 + DIT ++RA+ LR Sbjct: 203 RADDGMISGFVAVKEDITLQKRAERELR 230 Score = 55.7 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 52/158 (32%), Gaps = 8/158 (5%) Query: 79 LVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS-RGNIQRFN 137 L G + + + + + L ++ + + ++++D G I N Sbjct: 327 LAGSGLVPEGFIVLVRDLTERVRMEQALIESELRYRELFANSRVVMLVIDPVDGRIVEAN 386 Query: 138 RLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRL 197 +Y G + + + + RE V R + + GQ Sbjct: 387 AKACEYYGYDPVSLTRMKIEDINVPGREPLRFEM---VQARKPDTFRC--CHRLAGGQLR 441 Query: 198 FLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + +G+ ++ D+TE +R +ER+R Sbjct: 442 DVEVASSPIEIAGRKLLY--SIVRDVTERKRFEERMRQ 477 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 841 bits (2173), Expect = 0.0, Method: Composition-based stats. Identities = 187/564 (33%), Positives = 305/564 (54%), Gaps = 5/564 (0%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + S L V ++ ++IVI D G I+ N + TG +V+GQ+ Sbjct: 383 QDITEQKRASDSLLKLSLAVEQSPNSIVITDLDGKIEYVNNMFIKVTGYSRDEVLGQNPR 442 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L S + + + G+ + E+ + + Sbjct: 443 IL-KSGKTPQTTFKEMWAHLTRGDIWHGEIINRRKDKSIYIESATITPVKQADGKITNYV 501 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLD 275 DITE+++A+ LA D +TGLPNR +Q + + +N A +N + V++LDLD Sbjct: 502 AIKEDITEKKKAEAYTENLAYFDQLTGLPNRRMLQAQVKYRLNMAQSNHQPLTVMFLDLD 561 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS 335 NFK +ND+ GH GDQ+L ++ I + ++R GGDEF++L NT +A +A+ Sbjct: 562 NFKNINDSLGHTVGDQVLIKIAKRIKKAIREVDTVSRLGGDEFIMLFPNTDANAAMHIAT 621 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 ++ + + E+ + S+GIA+ P G+D ++++A+TAMY K R F Sbjct: 622 TLIQEISKASVVEHNELTITPSIGIAIYPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFV 681 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIP 454 TPEM L L+ LR AL+ ++L ++YQP+I+ G++ EAL+RW PE G+I Sbjct: 682 TPEMQLSASRNLQLENALRHALKRNELQLYYQPQISTSNGQIIGAEALLRWHHPELGMIS 741 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTAL 513 P +FI AE SG I+ +G WV+ +RQ W D G + +AVN+S Q + + T + Sbjct: 742 PAEFIPIAESSGQIIEIGEWVLRTAIRQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLI 801 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 +L E+ +++ELTE+ + + E ++V+ F + G ++ +DDFGTGYSSLS L Sbjct: 802 TDILAEVQLPNEYLELELTEAVTMHDPESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLK 861 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 +F + +K+DQ F+RDI P +++V AI+ +A L LQ IAEGVE+A++ AFL +G Sbjct: 862 KFKVYKLKIDQSFIRDISNDPDDRAIVSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGC 921 Query: 634 NERQGFLFAKPMPAVAFERWYKRY 657 +E QG+ F+KP+P+V FE++ + Sbjct: 922 HEVQGYYFSKPLPSVEFEQFRHNH 945 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 840 bits (2171), Expect = 0.0, Method: Composition-based stats. Identities = 185/563 (32%), Positives = 301/563 (53%), Gaps = 11/563 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 + + L A V + I I GNI NR + TG E +VIG++ L Sbjct: 768 ERKRMEARLLQAATVFDSSAEGITITAPDGNIIAVNRAFTEITGYTEDEVIGRNPRMLQS 827 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 ++ + + + ELW GQ + + + Sbjct: 828 GFQDRRFYLDMWQA-LGTQGRWRGELWNRRKDGQTFLESLTISAVKDAQGKVAHYVGVFS 886 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 DITE RRA ++L A+ D +TGLPNR + D + A+ A ++ + V ++DLD FK Sbjct: 887 DITELRRAHDQLDHQAHHDPLTGLPNRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKN 946 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRIL 338 +ND GH GD++L +V+ + + + R GGDEFL++ + + A+ +A +IL Sbjct: 947 INDTLGHQVGDRVLCEVAWRLGRLMRESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKIL 1006 Query: 339 TRLRL-PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L+ P + E + S+GI++ P+ G+D+ ++++AD AMY AKE GR + FT Sbjct: 1007 NVLQASPVTVE-HEFFVGASIGISVFPQDGADAETLMKNADVAMYRAKERGRNTYEFFTK 1065 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPL 456 ++ Q L ++T+LR+A+E +L ++ QP+ + G+V EALVRW P++GL+ P Sbjct: 1066 DLTQTSLARLQMETDLRRAIERGELRVYLQPQFSLATGKVVGAEALVRWLRPQQGLVLPG 1125 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQ 515 +FI AEESGLIVP+G WV Q A W G+ ++VN+S + A I ++ Sbjct: 1126 EFIKLAEESGLIVPIGEWVQGTAACQWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARR 1185 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 L+ +++E+TES ++ + E ++ V+ +G + +DDFGTGYSSL+ L R Sbjct: 1186 TLELSGLPARFLELEITESAIMSHAENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRL 1245 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P++ +K+DQ FVR + ++ RA++A+ +L L VIAEGVE+ + FLT G +E Sbjct: 1246 PLNKLKVDQSFVRGLPNDTEDCAIARAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDE 1305 Query: 636 RQGFLFAKPMPAVAFERWYKRYL 658 QG+L +PMP F+ ++ R+L Sbjct: 1306 MQGYLRGRPMP---FDDYHARFL 1325 Score = 83.4 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 73/220 (33%), Gaps = 28/220 (12%) Query: 49 EQAAR-IREMTVITSSLMMSLTVDESD---LSVHLVGRKINKR------EWA-GNASAWH 97 E R + + + L D + VH +GR I + WA + +A Sbjct: 567 EAVGRQVYGESASGETFDGELLYQRRDGTPIWVHAIGRTIGESADSETWIWAYADVTAQR 626 Query: 98 DTPAVARD---------------LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 R LS L F Q++ + G N+ + Sbjct: 627 AAEQALRQSHLELEQRVADRTLELSQQLHFMRQLIEAIPGPVFYKSQEGRYLGCNQAFLE 686 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 G +V+G +V+ + + ++ + R G+ E + G + + Sbjct: 687 LIGKSRDEVVGATVYDVAPADLADRYKAADDELLARLGSQ-VYEARVLDADGHYRDVIFH 745 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN-TDS 241 K + G+N L+ DITE +R + RL A DS Sbjct: 746 KATYGKPGENGGGLVGVMLDITERKRMEARLLQAATVFDS 785 Score = 81.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 63/222 (28%), Gaps = 13/222 (5%) Query: 16 SHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDL 75 ++P + +S+ S E QL ++ S + + Sbjct: 295 GYSPGQLIGQSTRCFFASEEAWREKGERAQLLIDECGSFVGEVQYCKSDGLPIWC----- 349 Query: 76 SVHLVGRKINKRE-WAGNASAWHDTPAVA---RDLSHGLSFAEQVVSEAHSAIVILDSRG 131 + G N E G + D R + L + A + I L Sbjct: 350 --RVTGSLANPGEPGDGLVWLFEDVTEKRQADRAMEALLREQALIFERAPTGIAFL-RDR 406 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 IQR N E G ++GQS F S + + EL Sbjct: 407 VIQRCNPSFERIFGYAPGQLLGQSTRVCFASEAAWREAGERAYAVADESGKFIGELEYCR 466 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 G ++ + + + + D+T R A+E L Sbjct: 467 ADGTPIWCQVTGSLLNPAN-PAEGYVWLFEDVTARRAAEEAL 507 Score = 80.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 68/211 (32%), Gaps = 15/211 (7%) Query: 26 SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKIN 85 S D LR + + + L A R T + + ++ L + R + Sbjct: 65 SCDALRGTVRPQLRVGKIVDLETRLA-RRDGSTFVAHLIARAIDPAAPRLGTVWIVRDVT 123 Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 + + SA L + + A + IVIL IQR NR + G Sbjct: 124 QEVLTRDTSA------------RLLREQQLIFENAETGIVIL-RERIIQRCNRRFAELLG 170 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 +++GQS + S + R Y + G+ + Sbjct: 171 YAADELVGQSTRLYYPSEEAWLETGRRAYAAIAETGIYHGDTIFRRRNGESFCCHITGSM 230 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRIL 236 + + +E + D++E+R + + L Sbjct: 231 MNRANPDE-GYVWLYEDVSEKRASAAAMDAL 260 Score = 77.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 78/248 (31%), Gaps = 25/248 (10%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAA--------R 53 + ++ + L + + +S+ + S E R + + R Sbjct: 156 RIIQRCNRRFAELLGYAADELVGQSTRLYYPSEEAWLETGRRAYAAIAETGIYHGDTIFR 215 Query: 54 IREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA 113 R + S+ + ++ + + A A+ A+ R+ + Sbjct: 216 RRNGESFCCHITGSMMNRANPDEGYVWLYEDVSEKRASAAA----MDALLREQTL----- 266 Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN 173 + A I + IQR N E G +IGQS F S Sbjct: 267 --IFEAAPIGIAFV-RDRIIQRCNPSLERIFGYSPGQLIGQSTRCFFASEEAWREKGERA 323 Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA---- 229 ++ ++ E+ G ++ R + G+ L+ D+TE+R+A Sbjct: 324 QLLIDECGSFVGEVQYCKSDGLPIWC-RVTGSLANPGEPGDGLVWLFEDVTEKRQADRAM 382 Query: 230 QERLRILA 237 + LR A Sbjct: 383 EALLREQA 390 Score = 75.3 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 78/238 (32%), Gaps = 13/238 (5%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + ++ + + + P L +S+ V S E A+++ + Sbjct: 406 RVIQRCNPSFERIFGYAPGQLLGQSTRVCFASEAAWREAGERAYAVADESGKFIGELEYC 465 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGL--SFAEQ--VV 117 + + + G +N A + R L S EQ + Sbjct: 466 RADGTPIWCQ-------VTGSLLNPANPAEGYVWLFEDVTARRAAEEALVESLWEQQLIF 518 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 A I I R NR CE+ G E + GQ LF S A R Sbjct: 519 DNAMIGIS-YHRNRMILRCNRRCEEIFGYLEGGLAGQPTRVLFASDEAWEAVGRQVYGES 577 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 SG ++ EL G +++ S +E + I + D+T +R A++ LR Sbjct: 578 ASGETFDGELLYQRRDGTPIWVHAIGRTIGESADSETW-IWAYADVTAQRAAEQALRQ 634 Score = 50.3 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 2/119 (1%) Query: 107 SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 L + ++ + A+V SR R N E+ G ++GQ Sbjct: 8 EQQLLEYKAILDHSGIAVVCTRSRLVY-RCNPRAEELFGWPAGTLVGQLDAVFLPDDASC 66 Query: 167 AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 A R R R G ++E + G + + D+T+ Sbjct: 67 DALRGTVRPQLRVGKIVDLETRLARRDGSTFVAHLIARAI-DPAAPRLGTVWIVRDVTQ 124 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 839 bits (2170), Expect = 0.0, Method: Composition-based stats. Identities = 197/561 (35%), Positives = 307/561 (54%), Gaps = 5/561 (0%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 + + L Q V ++ + +VI ++ G IQ N TG +VIG+ L Sbjct: 356 SKRKQSEEKLRHLSQAVEQSPADVVITNAEGIIQYVNPRFSQVTGYASKEVIGKKPSIL- 414 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 S R AA + +G + EL G + + I Sbjct: 415 KSGRTPAALYDSLWETISAGKEWRGELMNRKKDGSLFWQHAIISPIRDNSGVITHYISVK 474 Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFK 278 DI+ + +ERL AN D++TGLPNR D + AI A KV ++ LDLD+FK Sbjct: 475 EDISIRKEYEERLVRQANYDALTGLPNRILAMDRLKQAIAQAQRYNRKVALMLLDLDDFK 534 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRI 337 KVND GH GD LL++ +L ++ CL +AR GGDEF++L + + S+ E +A +I Sbjct: 535 KVNDTLGHAAGDLLLKEAALRLVDCLREGDTVARLGGDEFVLLLPDLTDTSSAEVVAEKI 594 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L PF +G E Y + S+GIA+ P+ D ++R+AD AMY +K G+G F FTP Sbjct: 595 LAACNQPFDVGGHEAYIAGSIGIAIFPDDERDPILLMRNADAAMYRSKREGKGVFRYFTP 654 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPL 456 EMN R E++ +++ LR A+E +++ +HYQP + G + EAL+RW +P G + P Sbjct: 655 EMNARALEHMRMESQLRHAIERNEMKVHYQPLVDSGTGRLVGAEALLRWSNPVLGEVSPE 714 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQV 516 FI AEE+GLI+ +G WV+ R A W+ + VAVNIS +Q +T+ ++ Sbjct: 715 QFIPLAEETGLILSIGAWVLRTACRDAASWQRPDHEIFVAVNISGKQFQKRTLVEIVRSS 774 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L E +++ELTES L+E+ + LS+IQ+ LG +DDFGTG+SS+S L RFP Sbjct: 775 LNESGLPPACLELELTESVLLEHTQETLSIIQELESLGVGFAIDDFGTGFSSISYLRRFP 834 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 D +K+D+ F++D+ LV++I+A+A +++L+V+ EGVE+ + FL +G + Sbjct: 835 FDTLKIDRSFIKDLGDNEGDADLVKSIIAMANSMSLKVVGEGVETHGQREFLRLSGCHIA 894 Query: 637 QGFLFAKPMPAVAFERWYKRY 657 QG+L+++P+P F+ + Sbjct: 895 QGWLYSRPIPGKDFQELIDGW 915 Score = 86.5 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 13/156 (8%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQ----VVS-EAHSAIVILDSRGNIQRFNRLCEDYT 144 S W D A R + S A + + A++ D G I +N E Sbjct: 217 RAMQSVWRDISA--RKQAEAASQAAKDHFLAFARSTPDALIAFDEEGRIVSWNEGAEAVY 274 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA----YEVELWIPTCKGQRLFLF 200 G ++ +++G + +L R A + R+ G +E G+ + Sbjct: 275 GFRQDEILGSPLSRLIPERYHAINAAWVKRMAKDRGRHNFTGKPIEAHGLRKSGEEFPVE 334 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 + +G+N F + DI++ ++++E+LR L Sbjct: 335 YSVGRWREAGRN--FFSVAARDISKRKQSEEKLRHL 368 Score = 55.3 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 68/200 (34%), Gaps = 12/200 (6%) Query: 45 QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVAR 104 + E R+ + + T D L + G + + + + Sbjct: 53 DIETEVRFRVERARKFEAHTVERTTPDGRVLEIQ--GSPLPGGGFITTYTDISERRNAEV 110 Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL-KEHDVIGQSVFKLFMSR 163 L ++V A AI++ G I NR + G D+IG+S+ ++ Sbjct: 111 RLRESEERFRRLVELAPDAILV-HQGGTIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPA 169 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 ++R ++ R VE+ + G ++ + + + G + + DI Sbjct: 170 CHDLVAKR-LKLLARGEQLPLVEMRLVRLDGGQVEVESTMGMTTYGGHRAMQSV--WRDI 226 Query: 224 TEERRAQ-----ERLRILAN 238 + ++A+ + LA Sbjct: 227 SARKQAEAASQAAKDHFLAF 246 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 839 bits (2170), Expect = 0.0, Method: Composition-based stats. Identities = 192/569 (33%), Positives = 300/569 (52%), Gaps = 13/569 (2%) Query: 97 HDTPAVARDLSH-GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 H V L+ L A + +++I DSRG I + N++ TG + +G++ Sbjct: 349 HARTHVRAQLAETDLRIAATAFE-SEESMIITDSRGIILKVNQVFTATTGYTSEEAVGKT 407 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 L R A R + ++ E+W G+ N + Sbjct: 408 PSLLKTDRHSAEFYHEMWRQ-IKQTGKWQGEIWDKRKNGEIYPKLLNIYAVKSKNGVVTH 466 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH--ADNNKVGVVYLD 273 + S TD+TE + A+E++ LA D++TGLPNR + D +++A+ ++++D Sbjct: 467 YVGSYTDLTERKMAEEKIISLAFYDTLTGLPNRRLLLDRLNYALASGLRTGKNGALLFID 526 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM 333 LD FK +ND GH GD LL+ V+ + +C+ +AR GGDEF+V+ + + ++EA Sbjct: 527 LDKFKTLNDTLGHDIGDLLLKQVAHRLKACVREIDTVARIGGDEFVVMLEDLNIESVEAA 586 Query: 334 AS------RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEG 387 A +IL LR+P+++ E ++S S+GI+L +G ++ AD AMY AK+ Sbjct: 587 AQTEVIGEKILAALRMPYQLLTNEFHSSVSIGISLFSNNGQSQDEPLKQADIAMYQAKKS 646 Query: 388 GRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQS 447 GR + F M + L+ LRKAL N+QL +HYQ ++ + E L+RW Sbjct: 647 GRNKLRFFDQRMQDTISSRANLEAELRKALANEQLQLHYQIQVDSAHQTIGAEVLLRWIH 706 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD--KGINLRVAVNISARQLA 505 P G+I P F+ AEE+GLI+P+G WV+ Q+ KW+D L +A+N+SARQ Sbjct: 707 PVNGIISPAQFVPVAEETGLILPIGLWVLETACAQLKKWQDNPATAQLILAINVSARQFH 766 Query: 506 DQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTG 565 T ++ V++ + + +ELTE L+ N + ++ ++ + G Q LDDFGTG Sbjct: 767 QNGFATEVRSVIERHDINPALLKLELTEGMLLNNLDDTIATMRSLQEFGVQFSLDDFGTG 826 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YSSL L R P+ +K+DQ FVRD+ Q++VR I+A+A +LNL VIAEGVE+ + Sbjct: 827 YSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQAIVRTIIAMAHSLNLNVIAEGVETEIQR 886 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFERWY 654 L KN + QG+LF KPMP FE Sbjct: 887 QILLKNQCSHFQGYLFGKPMPIEQFESLL 915 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats. Identities = 195/624 (31%), Positives = 324/624 (51%), Gaps = 5/624 (0%) Query: 37 TTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAW 96 P R EQ R+++ D ++V L G + Sbjct: 604 ELTPIRYQSSETEQLERLKQTRRYGPYQKHYRHKDGQLVAVRLNGSLVTAANGEQLILFI 663 Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 + ++ QV ++ I I+D+ I N TG ++IG++ Sbjct: 664 VEDITEQERTVARVNLLAQVFQQSGEGITIMDANDIIVDVNSAFTQITGYSRDEIIGKN- 722 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 + + R + R ++ E+W +G + + Sbjct: 723 CRFLEAERTDRSIDAQVRAALEQTGFWQGEVWDRHKEGFDFPKWLMMSIVRDETGAISHY 782 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDL 274 I S TDI+E + +ER+ LA+ DS+T LPNR ++Q ++ A ++ V+++D+ Sbjct: 783 IGSFTDISERKVNEERIHFLAHHDSLTLLPNRLSLQSRLEKVFQEAFISQTQIAVMFIDM 842 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA 334 D+FK +ND GH GD LL +V+ + + + +D ++AR GGDEF+V+ S+T + +A Sbjct: 843 DHFKNINDTLGHHVGDMLLLEVARRLKNIMGNDDIVARLGGDEFVVVLSDTDHDRVAKVA 902 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 + + L + I +++S S+GI+L P G A++++AD AMY AK GR + Sbjct: 903 EALRSGLNQTYLIDNKPLHSSPSIGISLFPTDGDSVEALMKNADMAMYRAKAAGRNNYQF 962 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 FT MN V E ++T LR+A+ ++L+++YQP++ G+V +EAL+RWQ PE GL+ Sbjct: 963 FTAAMNTLVTERQQIETGLRQAIACNELLLYYQPQVDISSGQVVGVEALIRWQHPELGLV 1022 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTA 512 P FI AEE +I+P+G+WV+ + + Q+A+WRDKG LR+AVN+SA QL TI Sbjct: 1023 APDRFIPIAEEIDMIIPIGQWVLENALAQLAEWRDKGAKGLRMAVNLSAHQLRKDTIVAD 1082 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + VL + +++E+TES ++ E ++ + Q G ++ +DDFGTGYSSLS L Sbjct: 1083 IINVLTKHKLGKGALELEITESVAMQYPEQNAKLLAELRQHGIELAIDDFGTGYSSLSYL 1142 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 P+D +KLD+ FV+DI P ++ A +++A L L V+AEGVE+ + L+ G Sbjct: 1143 KLLPLDRLKLDRSFVKDIESDPNDAAISAATISMAHELGLTVVAEGVENEAQLVLLSGMG 1202 Query: 633 INERQGFLFAKPMPAVAFERWYKR 656 + QG+ F+KP+ A R+ +R Sbjct: 1203 CDLVQGYYFSKPLAADDCFRFIER 1226 Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 58/161 (36%), Gaps = 4/161 (2%) Query: 78 HLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS-RGNIQRF 136 H + K+ ++ A + A L + +A + G Sbjct: 524 HRIAEKVAEKTMALSKEIARSQTFQA-TLMESEQRYRTLFDKAPVGHALKRLEDGQFVAI 582 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR 196 N+ + TG ++ ++L R +++ + + R ++ + GQ Sbjct: 583 NQAFMEITGYTLEELQAIDPWELTPIRYQSSETEQLER-LKQTRRYGPYQKHYRHKDGQL 641 Query: 197 LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + + N + + + ++ ++ DITE+ R R+ +LA Sbjct: 642 VAVRLNGSLVTAANGEQL-ILFIVEDITEQERTVARVNLLA 681 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats. Identities = 192/558 (34%), Positives = 313/558 (56%), Gaps = 9/558 (1%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + L+ ++QV AI+I D NI N+ D TG D +G + L Sbjct: 490 RKAAEESLNLSKQVFDNTSEAILIADRDRNILEVNQAYLDMTGYGREDCVGTYLALL--- 546 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 E A + + + EL G+ + + + + + TD Sbjct: 547 -DEPAGGGQLIGNLVQQHGKWMGELLAQKRSGEYYPAWVSISTVHDNHGSLQNYVVVLTD 605 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKV 280 I++ ++A+ERL+ LA D +TGLPNR +Q+ ++ A+ A + VGV+++DLD FK + Sbjct: 606 ISQRKQAEERLQFLATHDGLTGLPNRTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKII 665 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILT 339 ND GH GD LL++V+ + CL +AR GGDEF+VL + Q L +A +I+ Sbjct: 666 NDTLGHQAGDVLLQEVAGRLGECLRQTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMH 725 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 L PF + E+Y S S+GI++ P+ G D ++++++AD AMY AK+ G+ F ++ + Sbjct: 726 ALAQPFILMQQELYISASIGISVYPDDGVDISSLLKNADMAMYRAKDDGKNTFHFYSADG 785 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDF 458 N L L+ +LR+ALE ++ + YQ K+ + + EAL+RW S E G++ P DF Sbjct: 786 NANSVSRLTLENSLRRALERNEFSLLYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDF 845 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTIFTALKQVL 517 I AEE+G+I+ +G WV+ R W++ G +RV VNISARQ + +++ A+ L Sbjct: 846 IPVAEETGMIIEIGEWVLQQACRDACHWQEVAGRPIRVGVNISARQFREDSLYQAISNAL 905 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 +E +++E+TES +++N E A ++Q F LG+ V +DDFGTGYSSL L FPI Sbjct: 906 EESGLTPNCLELEITESMIMQNAERASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPI 965 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D++K+D+ FVRDI + ++ +AI+A+A +L + V+AEGVE+ + FL G ++ Q Sbjct: 966 DSLKIDRSFVRDIPQDSDDMAITQAIIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQ 1025 Query: 638 GFLFAKPMPAVAFERWYK 655 G++F++P+ F + Sbjct: 1026 GYIFSRPLVVEDFVGLLR 1043 Score = 56.8 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 42/141 (29%), Gaps = 8/141 (5%) Query: 99 TPAVARDLSHGLSFAEQVVSE---AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV-IGQ 154 L L + + A ++++ G I N G D+ +G Sbjct: 235 RLQADERLRQQLGLYNALSNAQSDAGEGVMVI-EDGKIIYANEAVRKIGGYDARDISMGS 293 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 S L ++ + E + G+ + + + + + Sbjct: 294 SFLSLIHPSDRERVAQHYKQRIRGEYTPSRYEALAISKLGKPIPIEVAAANYRDGSERIV 353 Query: 215 FLICSGTDITEERRAQERLRI 235 LI DI+ ++A+E L Sbjct: 354 VLII---DISSRKQAEEALLQ 371 Score = 44.1 bits (104), Expect = 0.019, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 64/227 (28%), Gaps = 17/227 (7%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDES 73 +G ++ SS + ++ Q + R T S +L + + Sbjct: 281 IGGYDARDISMGSSFLSLIHPSDRE--------RVAQHYKQRIRGEYTPSRYEALAISKL 332 Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAE----QVVSEAHSAIVILDS 129 + + N R+ + + + L + ++V + + Sbjct: 333 GKPIPIEVAAANYRDGSERIVVLIIDISSRKQAEEALLQSRAEYRKLVESVKAVVWRATP 392 Query: 130 RGNIQRFNRLCEDYTGLKEHDVIGQS---VFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 ++ E G + + V KL R R + +E Sbjct: 393 EAAFTFVSQEAESLLGYPVREWTSNTSFWVDKLHPDDRPWVVDFCARET--RQLKDHVLE 450 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + G+ ++L V L DIT+ + A+E L Sbjct: 451 YRMRAADGRTVWLQDIVRVIPDRFGKPQELFGVMLDITDRKAAEESL 497 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 838 bits (2167), Expect = 0.0, Method: Composition-based stats. Identities = 199/551 (36%), Positives = 304/551 (55%), Gaps = 5/551 (0%) Query: 108 HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAA 167 A V S A A +I D +G I R N + + TG E +V+G + + + +A Sbjct: 270 EETRLAAHVFSNALEATLITDPKGRILRINPMFTELTGYGEAEVVGGNPRIIRSNHHDAD 329 Query: 168 ASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEER 227 + FR G ++ E+W GQ + + + I S DITE+ Sbjct: 330 FYAEIWQAIFRDGR-WQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSFRDITEQV 388 Query: 228 RAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYG 285 AQ + LA+ D +T LPNR QD ++ A+ HA + + +++LDLD FKKVND G Sbjct: 389 EAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFKKVNDTMG 448 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLP 344 H GD LL++V++ + C+ +AR GGDEF V+ S + +A +IL L P Sbjct: 449 HRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKILASLHAP 508 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 I +V+ S+GI+L P G+ +++HADTAMY AK G+G+F ++ EM +R Sbjct: 509 IFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFYSAEMTKREE 568 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAE 463 L L+T LR+A+E Q +HYQP+ V EALVRWQ P G+I P+DFI AE Sbjct: 569 HRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISPVDFIPLAE 628 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFE 523 E LI + +V+ R+ +WRD+G ++ +AVN+S + + ++QVL++ F Sbjct: 629 EMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDLPEQVRQVLEDTGFP 688 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 +++E+TES +I+ + V+Q+ LG ++ +DDFGTGYSSLS L R P++ +K+D Sbjct: 689 AENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKRLPVNTLKID 748 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 + FVRDI + LV +I+ +A +L L+V+AEG+E + A L +E QG+L AK Sbjct: 749 RSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECDEIQGYLIAK 808 Query: 644 PMPAVAFERWY 654 PMPA + Sbjct: 809 PMPAEQAGIFL 819 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 187/579 (32%), Positives = 299/579 (51%), Gaps = 12/579 (2%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK 147 E G + D + R L A V ++ I++ D + I N TG Sbjct: 465 EMEGAVVVFEDI-SERRQKDEALKLASSVYQSSNDGILVTDEKNRILDVNPAFTRITGYT 523 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 DV G+ + +A ++ + G ++ E+W G+ + + V Sbjct: 524 LEDVRGKDPGIFQSGKHDAQFYQQMWQSILDDG-HWQGEIWDLKKNGELHAKWLSISVIR 582 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNN 265 + + + +DITE++R E + AN D++T LPNR D AI+ Sbjct: 583 RADGSIYRHVGQFSDITEKKRKDELIWEQANFDTLTNLPNRRLFADRFRQAISAGARSGR 642 Query: 266 KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT 325 ++ LDLD FK++ND +GH GD+LL +V+ + SC+ + +AR GGDEFLV+ + Sbjct: 643 YGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRLTSCVREEDTVARMGGDEFLVILNGL 702 Query: 326 SQSA------LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADT 379 E +A +I L P+++ E ++S S+GI L H D ++ H DT Sbjct: 703 GSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHSSSSIGIVLFRGHSDDPERLLAHVDT 762 Query: 380 AMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSL 439 AMY +K GR C F M + + + L+T LR ALE + ++HYQ ++ G Sbjct: 763 AMYQSKAKGRNAICFFDSSMQEILEKRGQLETALRGALERKEFLLHYQLQMDSSGRPIGA 822 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAV 497 EAL+RW + + G + P+ FI AEESGLI+P+G WV+ Q+A+W+ L +AV Sbjct: 823 EALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHWVLETACAQLARWQSDPRFNRLCIAV 882 Query: 498 NISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQV 557 N+SA Q + ++ VLQ+ + + +ELTES ++++ ++ ++ LG + Sbjct: 883 NVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELTESLVLDDINDSILKMEALKNLGVKF 942 Query: 558 HLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAE 617 +DDFGTGYSSLS L+R P+D +K+DQ FVRDI ++V+ I+++A +L ++VIAE Sbjct: 943 SMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITTDQHDAAIVQTIISMALSLGMEVIAE 1002 Query: 618 GVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 GVE+ ++ FL G QG+L+AKPMP E + Sbjct: 1003 GVETEEQREFLDLRGCQAYQGYLYAKPMPIEELEIKLAQ 1041 Score = 64.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 14/150 (9%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 + + + L ++ + I LD GN N D G ++ + Sbjct: 347 SIRQSRSAVAASEQRLRL---ILGSVSNGIWGLDKDGNTTFVNAAAADMLGYTPEELFDK 403 Query: 155 ----SVFKLFMSRREAAASRRNNRVFFRSGNAYEVE---LWIPTCKGQRLFLFRNKFVHS 207 ++ + A R G LW G L++ + Sbjct: 404 PMHATIHHSYPDGTHYPAERCPMHATLVDGKPRMGIDEVLW--RKDGSELYVDYSSHPIR 461 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILA 237 G+ E + DI+E R+ E L+ LA Sbjct: 462 SHGEME-GAVVVFEDISERRQKDEALK-LA 489 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 179/568 (31%), Positives = 300/568 (52%), Gaps = 12/568 (2%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 + + + A A ++I D+ NI R NR D TG +VIG++ L Sbjct: 567 ERKKIEVEIQIAATAFE-AQEGMLITDADRNILRVNRAFTDITGYSAEEVIGKNPRILSS 625 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 ++ +G A++ E+W G+ + I + S + Sbjct: 626 GLHDSHFYAAMWNTLVATG-AWKGEIWNKRKNGEVYPERLAITAVKDARGVVINYVASLS 684 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 DIT + A++ +R LA D +TGLPNR + D + A+ + + +++LDLDNFK Sbjct: 685 DITLHKAAEDEIRSLAFFDPLTGLPNRRLLMDRLQQALVASSRSGKAGALLFLDLDNFKN 744 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS---- 335 +ND GH GD LL+ V+ + +C+ +AR GGDEF+V+ + S ++EA + Sbjct: 745 LNDTLGHDIGDLLLQQVAQRLKNCVREGDTVARIGGDEFVVMLEDLSAESIEAASQTEAV 804 Query: 336 --RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 +I++ L P+ + EV+++ S+G L + + AD AMY AK+ GR Sbjct: 805 GWKIISTLNKPYHLEKFEVHSTPSIGATLFDSRPQIIDDLFKQADIAMYQAKKAGRNTMR 864 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLI 453 F P+M + L+ +LRK++E + + YQ ++ EAL+RW P+RG++ Sbjct: 865 FFDPQMQDTLNTRTALEADLRKSIERREFNLFYQIQVDEMNRPVGAEALIRWIHPKRGMV 924 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFT 511 P +FI AEE+ LI+ +G WV+ + Q+ W++ + NL +AVN+SA+Q T Sbjct: 925 SPAEFIPLAEETDLILNIGLWVLQEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSDFAT 984 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 ++ +++ + + +ELTES L EN E + ++ ++G Q LDDFGTGYSSL Sbjct: 985 QVRVFVEKYAIDPSKLKLELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSSLQY 1044 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 + + P++ +K+DQ FV D+ +++VRAI+A+A++L L VIAEGVE+ ++ L Sbjct: 1045 IKKLPLNQLKIDQSFVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLLLNK 1104 Query: 632 GINERQGFLFAKPMPAVAFERWYKRYLK 659 G QG+LF+KP+P F+ +R ++ Sbjct: 1105 GCTHFQGYLFSKPLPIREFDALLERAIE 1132 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 45/137 (32%), Gaps = 1/137 (0%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 A R+ V + AI+I D NI N TG DV+G++ Sbjct: 317 QNEAQRREAERLQRINATVFDSSAEAIIITDLNANIISVNPAFTQITGYSPEDVLGKNPR 376 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L ++ R R N ++ EL G + + I Sbjct: 377 ILSSGQQSKGFYRELWEALLRD-NFWQGELVNRHKNGSLYNIHLSISASRDGTGQLQHFI 435 Query: 218 CSGTDITEERRAQERLR 234 TDITE ++ + LR Sbjct: 436 GVTTDITERKQHESELR 452 Score = 78.4 bits (193), Expect = 8e-13, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 51/141 (36%), Gaps = 7/141 (4%) Query: 102 VARDLSHGLSFAEQ----VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + L + ++ A I ILD GNI + G + ++++G +V Sbjct: 443 ERKQHESELRMESEKNMVLLRNASDGIHILDPDGNIIEASDSFCSMLGYQRNEMLGMNVC 502 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 + + + F G + E G + + + + GK +F Sbjct: 503 QWDADFSDPRIVKLFRDQFTNKGRT-QFETRHRRKDGTVIDVEISGYPLQLHGKPALF-- 559 Query: 218 CSGTDITEERRAQERLRILAN 238 S DITE ++ + ++I A Sbjct: 560 NSSRDITERKKIEVEIQIAAT 580 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 193/608 (31%), Positives = 315/608 (51%), Gaps = 27/608 (4%) Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSH------GLSFAEQVVSEAHSAIV 125 ++ + + ++ +R A + R+++ L A + ++ Sbjct: 308 AEEMRIRELNEQLEQRVLERTARLESANQELNREIAERSRAEAELRIAAIAFD-SQEGMM 366 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 + D+ G I R NR + TG DV+G+ L R +AA R G A++ Sbjct: 367 VTDAHGVILRVNRAFVEETGYSAEDVVGRKRTMLTSGREDAALDDAMWETVQRCG-AWQG 425 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+W G+ ++ G G + + DIT+ + +++L LA D +T L Sbjct: 426 EVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVATHIDITQRKAVEDQLHKLAFYDPLTQL 485 Query: 246 PNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR + D + H + + N+ ++++DLDNFK +ND GH GD+LL +V+ + S Sbjct: 486 PNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGDRLLAEVAQRLKSS 545 Query: 304 LEHDQVLARPGGDEFLVLASNTSQS-----ALEAMASRILTRLRLPFRI---------GL 349 + +AR GGDEF+V+ + + +EA+A +IL L P+R+ Sbjct: 546 VRQCDTVARLGGDEFVVMVQDLAADSMVVAQVEAVAGKILAALDCPYRLVFDAELGRRNA 605 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWL 409 + + + S+GI L H ++ +++ AD AMY AK+ GR F PEM + + L Sbjct: 606 LNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFDPEMQAAITSRVAL 665 Query: 410 DTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 + +LR+A+E Q ++YQP++ + EAL+RW RG++PP +FI AEE+GLI Sbjct: 666 EADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSEFIPLAEETGLI 725 Query: 469 VPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCP 526 +PLG+WV+ Q+A W + + L VAVN+SA Q+ + VL + Sbjct: 726 LPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLAVLADAGANPQR 785 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 + +ELTES L+ N E ++ + G LDDFGTGYSSLS L R P+D +K+DQ F Sbjct: 786 LKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQSF 845 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 V ++ ++ + IVA+A++L L VIAEGVE+ ++ FL ++G + QG+LF+KP+P Sbjct: 846 VNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHAYQGYLFSKPLP 905 Query: 647 AVAFERWY 654 FE+W Sbjct: 906 LAGFEQWI 913 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 838 bits (2165), Expect = 0.0, Method: Composition-based stats. Identities = 198/544 (36%), Positives = 297/544 (54%), Gaps = 5/544 (0%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 ++ + AIVI D+ +I NR D TG + IG+ L S R+ A + Sbjct: 504 KIFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPS-LLSSGRQPPAFYQKMW 562 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + E+W G + + + + +DI+E + + +R Sbjct: 563 QQLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISERKEQEAHIR 622 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQL 292 +A D +T LPNR + D + AI A N++ V++LDLD+FK +ND GH GD+L Sbjct: 623 HMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDTLGHAHGDEL 682 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIE 351 L+ V+ + + + R GGDEF+++ S + +A R+L LR PF+I Sbjct: 683 LKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLRRPFQIDGQA 742 Query: 352 VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDT 411 + S S+GI+L P++GS+ ++ AD AMY AK GR ++ FTPE+N +V E L L+ Sbjct: 743 LAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPELNAQVAERLTLEN 802 Query: 412 NLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 +LR+ALE QL + YQP+ + EAL+RWQ PE+GLI P FI AEE+GLIV Sbjct: 803 HLRQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPLAEETGLIVE 862 Query: 471 LGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVE 530 +GRWV+ + RQ A W G LRVAVN+SARQL + ++ L C +++E Sbjct: 863 IGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHRLPSCWLELE 922 Query: 531 LTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI 590 +TES L+E+ E A+ +Q F + G + +DDFGTGYSSL+ L RF D IK+D+ FV ++ Sbjct: 923 VTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIKIDRAFVMNL 982 Query: 591 HKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 ++V AIV +A+AL +Q +AEGVES ++ FL + G + QG+L +P A Sbjct: 983 PDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLTGRPQSAGEL 1042 Query: 651 ERWY 654 Sbjct: 1043 TAQL 1046 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 837 bits (2163), Expect = 0.0, Method: Composition-based stats. Identities = 207/578 (35%), Positives = 309/578 (53%), Gaps = 11/578 (1%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + ++G + D L A QV ++I D+R I NR Sbjct: 569 TPQRFSGVLTDLTDRL----QAEERLRLAAQVFDSTQEGVMITDARRRIVSVNRAFTTLL 624 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G E +V+GQ+ L R + + ++ E+W G + + Sbjct: 625 GYTETEVLGQTPRMLSSGRHDRD-FYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSIS 683 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN 264 + TDIT + ++ RL LA+ D +T LPNR + +D A++ A+ Sbjct: 684 AVRDPHGQVTHYVGVFTDITHLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAER 743 Query: 265 --NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 ++ V+ LDLD FK +ND+YGHL GD+LL+ V+ + L LAR GGDEF +L Sbjct: 744 EGRRLAVLLLDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLM 803 Query: 323 SNT-SQSALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 + +AS +L+ L P+R +EV S+GI + P+HG +++ AD A Sbjct: 804 HDLRHDDDAARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAA 863 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSL 439 +Y AK GRG + + EM + E L ++ LR+AL + QL++HYQP++ R G + Sbjct: 864 LYRAKGDGRGVYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGA 923 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVN 498 EALVRWQ PE+GLIPP+ FI AE +GLI +G WV+ + RQ W D G+ L VAVN Sbjct: 924 EALVRWQDPEQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVN 983 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 +S RQ + T + QVL E +++ELTE L+E + AL V+Q+ LG V Sbjct: 984 VSPRQFHQADLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVA 1043 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 +DDFGTGYSSL+ L RFPID +K+D+ F+ DI P + AI+A+ +L + V+AEG Sbjct: 1044 IDDFGTGYSSLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEG 1103 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 VE+A++ AFL + + QGFL ++P+PA AFE+ + Sbjct: 1104 VETAEQLAFLQQRNCDRYQGFLRSRPLPAQAFEQLLRE 1141 Score = 68.4 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 2/158 (1%) Query: 81 GRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLC 140 G R++ DL +Q++ + + D G N Sbjct: 157 GADGQPRQFISVVQDITAVKQAEGDLLRQRRQLQQIIQSIPDCVAVRDLDGRYLLANPAA 216 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 E GL E ++ G+++ +++ EA +RR +R+ E G + Sbjct: 217 ERLIGLSEAEICGRTLEQIYPEP-EAGQARRADRLALSQNGLVRREASYTAADGSVATVD 275 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 G +I G D++ R RL A+ Sbjct: 276 LAISPLLGIDGRATGIISVGRDVS-RERHNLRLLEQAH 312 Score = 55.7 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 32/108 (29%) Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 I + G + NR + G + + AA + + + Sbjct: 72 GISLTALDGRLTEVNRRFAEIVGRTVEETQRLRFQDITHPDDLAADLDKVADLLAGRIDR 131 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 Y +E +++ + G+ I DIT ++A+ Sbjct: 132 YRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQFISVVQDITAVKQAE 179 Score = 51.4 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 18/199 (9%) Query: 48 AEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLS 107 AE AA+I E T L + ++ + G + A + +A D A + Sbjct: 414 AEDAAQIFEYT-----LPLPDGEHGFEMRMARAGSREVLA-IARDITAERDARAALQRSE 467 Query: 108 HGLSFAEQVVSEAHSAI----VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 L A V + + +I D F +D+ F+ + Sbjct: 468 ASLRLA---VDGSGDGLWDWDLITDK----ISFGAAYARLLRYPGNDLARDFRFRERLHP 520 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 + S R G + + G+ + H + TD+ Sbjct: 521 DDRDRSIAAVRNSIEYGTPFVATYRMRCFDGEYRWFQGRGMCHRDAHGTPQRFSGVLTDL 580 Query: 224 TEERRAQERLRILAN-TDS 241 T+ +A+ERLR+ A DS Sbjct: 581 TDRLQAEERLRLAAQVFDS 599 Score = 46.4 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 46/138 (33%), Gaps = 7/138 (5%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 D + L+ VV+ I + D+ G I +D + VIG+++ Sbjct: 335 DQQLGQQALAASERHLRAVVAALPDLIFLFDADGVIVDLWASQQDKLLMPREQVIGRAIA 394 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L A A RV E +P G+ F R S ++ Sbjct: 395 DLLPPSLTATALHHIARVLAEDAAQI-FEYTLPLPDGEHGFEMRMARAGSRE------VL 447 Query: 218 CSGTDITEERRAQERLRI 235 DIT ER A+ L+ Sbjct: 448 AIARDITAERDARAALQR 465 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 837 bits (2163), Expect = 0.0, Method: Composition-based stats. Identities = 206/621 (33%), Positives = 342/621 (55%), Gaps = 7/621 (1%) Query: 45 QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVAR 104 ++A RI M+ + V +I R+ + R Sbjct: 169 DIAALIGTRIDAALRGKGMQMLEFQWSRDPMCVRHWEARIVPRDRQEVLLVVREITQ-RR 227 Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 + L +V ++ AI+I D+ I NR E G +E DV+G ++ ++ Sbjct: 228 QQENQLRLWAKVFEASNEAILITDANFRIISVNRAYETIMGYREQDVLGVDTLEV-GAKL 286 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 + + RN + ++ EL G+ + + + S I DIT Sbjct: 287 QTYSFYRNLVSLLKERGHWQGELINQRKSGEEFPSWFSVTQVTNSRGEPEHYIAIFNDIT 346 Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVND 282 E + ++ ++ LA+ D++TGLPNR + D ++ AI K+G++++DLD FK VND Sbjct: 347 EHKNSRAQIEFLAHHDALTGLPNRILLNDRLEMAITQVRRQGEKLGILFIDLDRFKNVND 406 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRL 341 + GH GDQ+L++ + + + + ++R GGDEF+VL L + ++ +L Sbjct: 407 SLGHGVGDQILQEAAKRLTANVRTGDTVSRLGGDEFVVLFPRVRTEGNLADLTIKLREQL 466 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 +LP+ + I ++ + S+GIA+ P+ G D +I++AD AMY AKE GR + +TP +N Sbjct: 467 QLPYTVDGISLHITPSIGIAVYPDDGEDPNTLIKNADAAMYLAKEKGRNNYQFYTPTLNA 526 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDFIS 460 + + L L+++LR A++ +HYQP+I G++ LEAL+RW+ ERGLI P +FI Sbjct: 527 KTLDRLKLESDLRSAIDAGDFELHYQPQIIGSSGQLWGLEALIRWRHRERGLISPAEFIP 586 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQE 519 AEE+GLIV LG WV++ V+Q+A+WR +G +L V+VNISA Q +K +LQE Sbjct: 587 LAEETGLIVGLGDWVLVQAVKQLAEWRRQGHNHLVVSVNISALQFRQGDFLDRVKHILQE 646 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 I++ELTE+ L+++ + A+ ++ +LG ++ +DDFGTG+SSL+ L PI+ Sbjct: 647 AQLVPDAIELELTETMLMQDVQSAIQTLKGLRELGFRIAIDDFGTGFSSLNYLRHLPINV 706 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+DQ FVR++ ++P S ++V +I+A+AQAL + IAEGVE+ E L G QG+ Sbjct: 707 LKIDQSFVREMLQEPESLAIVESIIALAQALGKETIAEGVETRAEFDVLQARGCRLMQGY 766 Query: 640 LFAKPMPAVAFERWYKRYLKR 660 FA+PMP V F++WY++ + Sbjct: 767 FFARPMPPVIFDQWYQQQTQS 787 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 196/604 (32%), Positives = 311/604 (51%), Gaps = 14/604 (2%) Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 + + ++ + G + + D A RD L A++V + AI Sbjct: 205 PAPHSFERRRRDGTVLLIQGRPLPQGGFVTTYTDITARKRD-KERLQLADKVFENSREAI 263 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR-------RNNRVFF 177 VI D I N + TG+ G R Sbjct: 264 VITDLGHRIVSVNPAYTEITGIAATAAQGTCFRPGSDDGDSGEEGEGAGGPDSRTVWAIV 323 Query: 178 RSGNAYEVELWIPTCKGQRLF-LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 ++ E C GQR V + I +DIT +RA+ ++ L Sbjct: 324 GEHGSWSGETTGVRCGGQRYPRTLMINGVRDPETREITHFIAIFSDITARKRAEADIQHL 383 Query: 237 ANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLR 294 A D++TGL NR ++ + ++ A N ++ V++LDLD FK +ND+ GH GD+LL+ Sbjct: 384 AYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGDELLK 443 Query: 295 DVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVY 353 V+ + + +AR GGDEF+V+ + +A+++L +L P+ + E++ Sbjct: 444 QVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTELH 503 Query: 354 TSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNL 413 T+ S+GI+L P+ +D A++R+ADTAMY AK GR +F +T EMN+ L L+ L Sbjct: 504 TTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLERKL 563 Query: 414 RKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLG 472 R A+ + + YQP+ R G + LEALVRW+ P+ GLI PL FI AEE+G+IV +G Sbjct: 564 RGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVEIG 623 Query: 473 RWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVEL 531 WV+ + RQ +W D G+ LR++VN+S RQL ++ + + L +++E+ Sbjct: 624 TWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLELEI 683 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TES +++N + A++++Q LG ++ +DDFGTG+SSLS L FP+D +K+D+ F+ DI Sbjct: 684 TESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISDIE 743 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 +V A V++A L L VIAEGVESA + A L + G +E QGF F++P+ A E Sbjct: 744 HDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTADVVE 803 Query: 652 RWYK 655 + Sbjct: 804 NLLR 807 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 203/595 (34%), Positives = 322/595 (54%), Gaps = 9/595 (1%) Query: 70 VDESDLSVHLVGRKINKREWAGNASA---WHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 ++ D V + + + R+ G +A + R + A +V I+I Sbjct: 336 LNRFDNQVPVSVKTVAMRDAFGRINAVWRMVRDISEKRAAEERVQLAAKVFENTVEGIMI 395 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D+ I+ NR + TG +H+V+GQ L R + + + G +++ E Sbjct: 396 TDADRRIRSVNRAFTEITGYTQHEVLGQKTSILSSGRHDEPFYEQMWQSIAEHG-SWQGE 454 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 LW G+ + S + +D+TE + A ER++ LA+ D +T LP Sbjct: 455 LWNRRKNGEVYPEWLAINAVRNSLGEITHYVAIFSDLTERKAADERIQFLAHFDVLTSLP 514 Query: 247 NRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR MQD ++ AI++A DN ++ ++ LDLD FK VN++ GH GD LL+ + I S + Sbjct: 515 NRIHMQDRVELAIHNAVRDNQRLALLLLDLDRFKTVNESLGHSAGDTLLQVAADRIKSVM 574 Query: 305 EHDQVLARPGGDEFLVLASNTSQSALEAMA-SRILTRLRLPFRIGLIEVYTSCSVGIALS 363 ++LAR GGDEF++L S A+A R+ P + + + S+GI++ Sbjct: 575 APGEMLARQGGDEFIILLPVISDPGEAALAAERVRDVFANPIELHNHVLTITPSIGISVY 634 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P+ G D ++R+AD AMY AK GR + +T ++N R E L +++ LR ALE D+ V Sbjct: 635 PDDGRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNARAREILAIESQLRFALERDEFV 694 Query: 424 IHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 +HYQP++ G + EAL+RW P GL+ P+ FI AEE G IV +G WVI + RQ Sbjct: 695 LHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIGNWVIAEATRQ 754 Query: 483 VAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 + +WR G+ L +A+N+SA Q + +KQ L+ +D+E+TES ++E+ + Sbjct: 755 LVEWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEVTESIIMEDAQ 814 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 + I +G ++ +DDFGTGYSSLS L RF D +K+D+ FVRDI + ++ R Sbjct: 815 ATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPQDADDSAIAR 874 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 AI+ +A+ LN+QV+AEGVE+ ++ FL + G + QG+L AKP+PA F + Sbjct: 875 AIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFAELLHK 929 Score = 67.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 48/155 (30%), Gaps = 5/155 (3%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAE----QVVSEAHSAIVILDSRGNIQRFNRLCED 142 E A A R++ L +E ++ IVI G + N + Sbjct: 229 DELRAKTLALEADIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLN 288 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 + Q+ + L EA + R G E E ++ + Sbjct: 289 LMCYSLDQLKQQNFWSLVAEESEALERFNLDNKVLRFGYCDEFEATYLNRFDNQVPVSVK 348 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + + DI+E+R A+ER+ LA Sbjct: 349 TVAMRDAFGRINAVWRMVRDISEKRAAEERV-QLA 382 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 835 bits (2159), Expect = 0.0, Method: Composition-based stats. Identities = 187/576 (32%), Positives = 285/576 (49%), Gaps = 12/576 (2%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 + + L A H AI+I D+ NI R N+ ++ TG DVIG++ Sbjct: 264 LKQQIEDRKQAENQLRIAATAFE-THEAIMITDAHANIIRVNQAFQNITGYSPEDVIGKN 322 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 L R+ + + SG ++ E+W G+ + + Sbjct: 323 PRVLSSGRQGSEFYAAMWKRLLGSG-SWTGEIWDKRKNGEVYPKWLTITAVKDNEGVTTE 381 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA--INHADNNKVGVVYLD 273 + +DIT + A+E + LA DS+T LPNR + D I+ A I+ N+ +++LD Sbjct: 382 YVAIFSDITLRKHAEEEIYTLAFYDSLTKLPNRRHLLDRINQARSISARSNHYGALLFLD 441 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA---- 329 +D FK +ND GH +GD L +VS + +C+ +AR GGDEF+VL Sbjct: 442 MDRFKILNDTLGHDYGDLFLVEVSRRMRNCVRDMDTVARIGGDEFVVLIEEIGTDNEEVS 501 Query: 330 --LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEG 387 + +A +I L P+ + E ++S S+G+ L + ++RHAD AMY AKE Sbjct: 502 TKVALIAEKIRAALTEPYLLKDKEHHSSPSIGVCLYLGNEESVDTLLRHADLAMYQAKES 561 Query: 388 GRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQS 447 GR F P M V L+ ++R A+ QL ++YQ ++T EAL+RW Sbjct: 562 GRNGVRFFDPAMQLAVETRAALEADMRHAVTGKQLRLYYQIQLTSDHRPLGAEALIRWMH 621 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLA 505 P RGL+ P FI AEES LI+ +G WV+ +Q+ W ++ NL +A+N+SA+Q Sbjct: 622 PVRGLVSPAQFIPIAEESSLILEIGHWVLETACKQLVLWSKHERTRNLILAINVSAQQFN 681 Query: 506 DQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTG 565 + +L + +ELTES ++ + +S + LG ++ LDDFGTG Sbjct: 682 KHDFVDTVSTLLHLHQLNPNRLKLELTESVVLSDVADVVSKMHALKALGVKLALDDFGTG 741 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YSSLS L + P+D IK+D+ FV D+ P +V+ I+ +A + VIAEGVE+ + Sbjct: 742 YSSLSYLKQLPLDQIKIDRSFVSDVTTDPSDAVMVQTIINLAHNFRMNVIAEGVETEDQL 801 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 FL +NG QGFLF KPMP FE + A Sbjct: 802 NFLKQNGCMAYQGFLFGKPMPIDEFEALLGQTQTLA 837 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 195/568 (34%), Positives = 304/568 (53%), Gaps = 8/568 (1%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A H+ L A V + IV+ D I NR D TG ++ +V+ Sbjct: 715 ALDVHEHEQQQAFSMKQLQLAATVFDNSREGIVLTDKNEKIVSVNRAFSDITGYRDDEVL 774 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 GQ+ L +R +N ++ E+W GQ + + Sbjct: 775 GQTPRILKSNRH-GRDFYQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAVCDDQQE 833 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVV 270 I TDI++ + +QE+L L+ D +T LPNR+ +D A+ HA+ + V+ Sbjct: 834 VSHYIAVFTDISQAKESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHHSFAVL 893 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA- 329 DLD+FK VND++GHL GD LLR ++ + SCL +LAR GGDEF++L + + S Sbjct: 894 CFDLDHFKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLEDVADSHR 953 Query: 330 LEAMASRILTRLRLPFRIGLI--EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEG 387 + MA IL +L+ P + EV S SVGIA+ PEHG D+ +++ AD+A+Y AK+ Sbjct: 954 VTMMAEEILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSALYRAKQH 1013 Query: 388 GRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQ 446 GR +F + EM ++ E + L +LR+ALE + ++YQP++ G++ EAL+RW Sbjct: 1014 GRARFAYYNEEMTEQAQERVQLSFHLRQALEKKEFAVYYQPQVDLGTGQIVGAEALMRWN 1073 Query: 447 SPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLA 505 SPE GL+ P FI AEE G I +G W++ V Q W D G L +AVN+SA Q A Sbjct: 1074 SPELGLVTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGYPPLTLAVNLSAVQFA 1133 Query: 506 DQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTG 565 ++ I LK+ LQE + +++E+TES L+ ++ + +++ ++LG ++ LDDFGTG Sbjct: 1134 EEDIACRLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLKSLNELGVRLALDDFGTG 1193 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YSSL+ L FP+ +K+D+ F+ D+ +V AIV + L ++AEGVE+ + Sbjct: 1194 YSSLAYLKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGHGLGFDLLAEGVETVAQR 1253 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFERW 653 L + G + QG+ + P+PA F Sbjct: 1254 DCLAQLGCDYYQGYYCSPPVPACEFAAL 1281 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 190/590 (32%), Positives = 298/590 (50%), Gaps = 23/590 (3%) Query: 76 SVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQR 135 + HL+G + R G + L A H AI+I D+ G I + Sbjct: 552 AGHLLGLRGTGRNITG-----------RKLKEEQLRVAAAAFE-THEAIMITDAHGTIIK 599 Query: 136 FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQ 195 N+ + TG + +V+G++ L R E + + G + E+W GQ Sbjct: 600 VNQAFQRITGYSQEEVLGENPRILSAGRNEKSFYSAMWQQLTTLGR-WRGEIWDKRKSGQ 658 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLI 255 + + +DIT+ + A+E +R LA D++T LPNR + D + Sbjct: 659 IYPKWMTITAVRDENGKTTEYVAIFSDITQRKLAEEEIRNLAFYDALTRLPNRRLLLDRL 718 Query: 256 DHAIN-HADNNKV-GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 A++ A + + V++LD+D FK +ND GH +GD LL +V+ I C+ +AR Sbjct: 719 HAALSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAERIKLCVREIDTVARL 778 Query: 314 GGDEFLVLASNTSQSA------LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHG 367 GGDEF++L A + A+A +I + L +P+R+ ++S S+G+ L Sbjct: 779 GGDEFVILVEEIDTRAEETSKHIAAIAEKIRSALSVPYRLKEKHHHSSPSIGVCLYRGIE 838 Query: 368 SDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQ 427 + +++HAD AMY AK+ GR F P M Q V + L+ +LR AL NDQL ++YQ Sbjct: 839 ESTDDLLKHADMAMYQAKDSGRNAVRFFDPLMQQAVEARVTLENDLRHALPNDQLQLYYQ 898 Query: 428 PKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR 487 ++ EALVRW P RG++ P FI AEE+ LI+ +G WV+ Q+A W Sbjct: 899 IQVDNDRRAIGAEALVRWIHPIRGMVSPAHFIPIAEETSLILEVGAWVLKTACLQLAVWA 958 Query: 488 DKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALS 545 D+ + NL +AVN+S +Q + ++++ + +ELTES ++ + + Sbjct: 959 DRPMTCNLILAVNVSVQQFKQVGFVEHIAELIRAYCIVPQRLKLELTESVVLNDVSDIVQ 1018 Query: 546 VIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVA 605 + LG ++ +DDFGTGYSSLS L P+D +K+DQ FVR+I +V+ I+A Sbjct: 1019 KMCALKSLGVRLSMDDFGTGYSSLSYLKNLPLDQLKIDQSFVRNIATDENDAVMVKTIIA 1078 Query: 606 VAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +AQ L VIAEGVE+ + AFL +NG QG+ F KP P F+ + Sbjct: 1079 MAQNFRLNVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAPIEQFQSQLE 1128 Score = 76.1 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 5/129 (3%) Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 + + + + G N + E G E ++G++ + SR +A + R + Sbjct: 76 LRTLFNTIKDLVWLKAPDGVYLACNPVVERMLGTAEAAIVGRTDYDFI-SREQADSFREH 134 Query: 173 NRVFFRSGNAYEVELWIPTCK-GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 +R +G E W+ G +K I + DITE +RA+ Sbjct: 135 DRAAMNTGTVCINEGWLTFKDTGYCGLFETSKTPVYDDTGQLIGVFGIARDITERKRAEA 194 Query: 232 RL---RILA 237 L A Sbjct: 195 ALKNSEQQA 203 Score = 75.7 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 40/134 (29%), Gaps = 4/134 (2%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 + + L + A I+ ++ + I N G + +++ ++ L Sbjct: 322 ERKKMEERLELTQFASDYAPDCILWVNEQARICYANEAALHCHGFSKEELLSMTIHDL-- 379 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 + + +E G + + K + I Sbjct: 380 DPDFPPDVWLAHWHELQHKGGITIETRHRRRDGSIFPIEVSANFVKFGDKE--YNIAYHR 437 Query: 222 DITEERRAQERLRI 235 DITE ++++ LR Sbjct: 438 DITERKKSEAALRY 451 Score = 64.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 31/163 (19%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 G A + L + A ++ + +++ +R I N++ D GL E Sbjct: 181 GIARDITERKRAEAALKNSEQQARNLIDKLQVGVLLQSARAEILLCNQIALDLLGLSEAQ 240 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW-------------------IPT 191 ++G+S + + V G+ + Sbjct: 241 LLGKS------------SFDPDWNVIHEDGSPFPGSEHPVPVSIATKSLVHDVVMGVYRP 288 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 K R++L + ++C+ DITE ++ +ERL Sbjct: 289 SKRDRVWLLVSAAPQLNPNNEVEQVVCTFVDITERKKMEERLE 331 Score = 59.1 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 5/144 (3%) Query: 95 AWHDTPAVARDLSHGLSFAEQ----VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 A+H + L ++EQ V + + +D + + G Sbjct: 434 AYHRDITERKKSEAALRYSEQRLRDVSEASGEYLWEIDINLGYTYVSNRSIEVKGYTPEQ 493 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 ++G + + FM + + R + ++++ T G L+ + Sbjct: 494 LLGHAPAE-FMPPEDIDMAARIVNLAISKNQPFKLQHRDITPSGAILWEEVSGVPFYDDA 552 Query: 211 KNEIFLICSGTDITEERRAQERLR 234 + + L +G +IT + +E+LR Sbjct: 553 GHLLGLRGTGRNITGRKLKEEQLR 576 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 183/573 (31%), Positives = 308/573 (53%), Gaps = 7/573 (1%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK 147 E+ + D ++ L + V A IVI + G I++ N CE +G + Sbjct: 332 EFNILGHSIVDLDHQRKESEKQLLLSSSVFDNAVEGIVITNLDGIIEQVNPACEAMSGYR 391 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 ++IG++ +A ++ + G +E E+W G+ L + + Sbjct: 392 LKELIGENPRIFRSDHHNSAFYQQMWQSLIEEGR-WEGEVWNRRKNGEVYPLNVSISRCT 450 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK- 266 S + DI+E +R++E+L+ A D++T LPNR D + A+ HA +K Sbjct: 451 NSAGIPSHYVAIFHDISEIKRSEEKLQHQAYHDALTNLPNRKLFHDRLSVAVAHARQHKT 510 Query: 267 -VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT 325 + V+YLD+DNFK +ND+ GH +GD+LL+ +S +LSC + AR GGDEF++L Sbjct: 511 KLAVIYLDIDNFKYINDSLGHHYGDKLLQQISERLLSCTRQEDTTARLGGDEFIILMPEI 570 Query: 326 SQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 + + RIL +L LP + + + S+G+ + P+ +I++AD AMY A Sbjct: 571 EDPHDITVLCRRILKQLELPHALSGRDYTVNVSMGVTVFPDDADTPEDLIKNADIAMYRA 630 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALV 443 KE G+ + +FT M Q + + + L+ L AL ++ V+ YQP++ E V EAL+ Sbjct: 631 KEAGKNGYQLFTAAMQQTIMQRIELEARLSDALCRNEFVLFYQPQVDLESEHVIGAEALI 690 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISAR 502 RWQ P+ L+ P +FI AEE GLI + WV+ RQ KWR++ G N +++VN+S+ Sbjct: 691 RWQKPDGQLVYPDEFIPIAEECGLITQIDHWVLKAACRQANKWREQSGRNFKMSVNLSSE 750 Query: 503 QL-ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 Q DQ + +K VL + + +E+TE+ ++ + E A++++ Q + LG + +DD Sbjct: 751 QFAKDQELVQRVKNVLNKTGLPAECLTLEVTENAVMSDTESAIAIMTQLTALGVSIAIDD 810 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSLS + FP +K+D+ FV+DI ++ +I+++ + LN++VIAEGVE Sbjct: 811 FGTGYSSLSYVKNFPARYLKIDRSFVKDIPGDSDDMAIAASIISLGRNLNMEVIAEGVEE 870 Query: 622 AKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 + FL ++ + QG+ + KP A F + + Sbjct: 871 QTQIDFLKQHRCQQVQGYFYGKPCAAEFFSQQF 903 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 834 bits (2155), Expect = 0.0, Method: Composition-based stats. Identities = 198/571 (34%), Positives = 304/571 (53%), Gaps = 26/571 (4%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 + R + A +V I+I D+ I+ NR TG + +V+GQ L Sbjct: 372 SEKRVAEERMQLAAKVFENTVEGIMITDADKRIRSVNRAFSQITGFGQQEVLGQKPDML- 430 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 S R +++ ELW G+ + + + Sbjct: 431 SSGRHDETFYEAMWSAINEHGSWQGELWNRRKNGEVYPEWLAISAVRNAVGEITHYVAIF 490 Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLD----- 275 +D++E + A ER++ LA+ D +TGLPNR +QD ++ AI +A D Sbjct: 491 SDLSERKAADERIQFLAHFDVLTGLPNRAHIQDRVELAIQNATR----------DNERLA 540 Query: 276 -------NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS 328 FK +N++ GH GD LL+ ++ I S L +V+AR GGDEF+VL + Sbjct: 541 LLLLDLDRFKTINESLGHSAGDALLQVLAERIRSTLLTGEVVARQGGDEFIVLLPLIADP 600 Query: 329 ALEAMA-SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEG 387 A+A RI L P + + + S+GI++ P+ G D ++R+AD AMY AK Sbjct: 601 GSAALAAERIREVLEPPVELFNHSISITPSIGISVFPDDGRDFETLVRNADAAMYHAKSA 660 Query: 388 GRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQ 446 GR + +T ++N R E L +++ LR AL+ D+ V+HYQP++ GE+ EAL+RWQ Sbjct: 661 GRNSYKFYTADLNARAREILEIESQLRYALDRDEFVLHYQPQVDLKTGEIIGAEALIRWQ 720 Query: 447 SPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLA 505 PE GL+ P+ FI AEE G IV +G WVI + RQ+A+WR +G+ + +AVN+S Q Sbjct: 721 HPELGLLGPVRFIEVAEERGFIVQIGNWVIQEACRQLAQWRRQGLPRISLAVNLSTLQFR 780 Query: 506 DQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTG 565 Q + L++ L +DVE+TES ++++ E + I + +G Q+ +DDFGTG Sbjct: 781 QQDLAVHLQRALSAHGLVGSDLDVEVTESVIMDDVETTIHTIDRIKSMGLQLSIDDFGTG 840 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YSSLS L RF D +K+D+ FVRDI ++ RAI+ +A+ LN+ VIAEGVE+ ++ Sbjct: 841 YSSLSYLKRFKADKLKIDRSFVRDIPMDADDSAIARAIINMAKNLNMTVIAEGVETIEQW 900 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 FL + G + QG+L AKP+PA FER ++ Sbjct: 901 KFLDREGCHAAQGYLLAKPVPAKEFERLLEK 931 Score = 68.4 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 47/155 (30%), Gaps = 5/155 (3%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAE----QVVSEAHSAIVILDSRGNIQRFNRLCED 142 E A A R++ L +E ++ IVI G + N + Sbjct: 231 DELRAKTLALESDIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLN 290 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 + Q+ + L E + R G E E G + + Sbjct: 291 LMCYSLDQLKLQNFWSLIAPESEGMERFNLDNKVLRFGYCDEFEASYINRFGNVVPVSVK 350 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 S + DI+E+R A+ER+ LA Sbjct: 351 TVAMRDSFGRINAVWRMVRDISEKRVAEERM-QLA 384 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 833 bits (2154), Expect = 0.0, Method: Composition-based stats. Identities = 190/565 (33%), Positives = 295/565 (52%), Gaps = 12/565 (2%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 + + L A A ++I D I R N+ TG +V+G++ L Sbjct: 451 ERQKVESELRIAAAAFE-AQEGMLITDRHNVIMRVNQAFTSITGYLAEEVLGKNPCFLAS 509 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 R + A ++ +E E+W G+ + + + Sbjct: 510 GRHD-AGFYQSMWEGLNEKGKWEGEVWNRRKDGEIYPEYLLISAVKDIKNEVANYVATFR 568 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 DIT + A+ ++ LA D +T LPNR + D ++HA+ + N+ ++++DLDNFK Sbjct: 569 DITANKAAESEIKKLAFYDPLTLLPNRRLLTDRLNHALASSARNRNIGALLFIDLDNFKT 628 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA------LEAM 333 +ND GH GD LL+ V+L + SC+ D LAR GGDEF+V+ N S+ A E + Sbjct: 629 LNDTLGHDMGDALLKQVALRLKSCIREDDTLARLGGDEFVVILENLSELAMDAATKAELI 688 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 +IL L + + E + + S+G+ L H +++ AD AMY +K+ GR Sbjct: 689 GEKILAALNQVYPLASQEYHGAASIGVTLFAGHALSIDELMKQADIAMYQSKKSGRNTLR 748 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLI 453 F + + + E L+ LRKA++ QL +HYQ ++ G S EAL+RW P RGLI Sbjct: 749 FFDLDTQKIINERAELEIELRKAVDKKQLHLHYQIQLNSVGTPLSAEALIRWVHPVRGLI 808 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFT 511 P FI AE++GLI+P+G+WV+ Q+ W+D+ +L +AVN+SA+Q + Sbjct: 809 SPAHFIPLAEDTGLILPIGQWVLDTACAQLHSWQDERFTQDLTLAVNVSAKQFHQKNFVA 868 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 +K+ +Q + +ELTES L+EN E + + ++G Q LDDFGTGYSSL Sbjct: 869 LVKETVQRHAINPKLLKLELTESMLVENIEDIIVTMNALREMGIQFSLDDFGTGYSSLQY 928 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L R P++ +K+DQ FVR++ +++VR IVA+A++LNL VIAEGVE+ ++ L Sbjct: 929 LKRLPLNQLKIDQSFVRELSSSSSDRAIVRTIVAMAESLNLNVIAEGVETEEQHTLLQDI 988 Query: 632 GINERQGFLFAKPMPAVAFERWYKR 656 G N QG+LF KPMP + R Sbjct: 989 GCNYYQGYLFGKPMPIEQLDAILAR 1013 Score = 68.8 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 53/162 (32%), Gaps = 7/162 (4%) Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 + + I++R+ A A A + + + ++ + +L G I Sbjct: 305 VIGGIAIVESIHERKMAEMALALSN-----QKHDEERKLFQTILDNLPLGMWMLGVDGKI 359 Query: 134 QRFNRLCEDYTGLKEHDVIGQ-SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTC 192 + N + G+ HD L + F + Y E W+P Sbjct: 360 KFVNETFCNALGIAAHDFFDAGHYSDLLPLSIADKCKESDRACFMQGEPHYSTE-WLPFT 418 Query: 193 KGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 G+ L + S N LI DITE ++ + LR Sbjct: 419 DGRAHLLEMTRVRLHDSANNVTGLIGLAADITERQKVESELR 460 Score = 51.8 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 75/235 (31%), Gaps = 24/235 (10%) Query: 54 IREMTVITSSLMMSLTVDES-DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF 112 I + +++ L M++ + L +V ++ R N H+ ++ Sbjct: 152 IARLLIVSDELAMAMAIAVLLYLGFLMVSLRLINRNLIENIRMRHEGELREAAMNVSKER 211 Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 +++ + I D I N + G V G ++ L + A Sbjct: 212 YRLLLAHSPVGIFHYDLNFVITYCNARFAELIGCPVAQVNGLDLYNLS----DNAVLPAL 267 Query: 173 NRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQER 232 +E + G ++ + N I I I E + A+ Sbjct: 268 TAALAGDRGYFEGQYQAVFNDG---WIAMTCAASCDARGNVIGGIAIVESIHERKMAEMA 324 Query: 233 LRILAN--TDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDN-FKKVNDAY 284 L L+N D R Q ++ DN +G+ L +D K VN+ + Sbjct: 325 LA-LSNQKHDE-----ERKLFQTIL-------DNLPLGMWMLGVDGKIKFVNETF 366 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 188/563 (33%), Positives = 312/563 (55%), Gaps = 6/563 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 AR+ L A+QVV A AIVI + + I N E TG H+V+G++ Sbjct: 375 EARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNPKITQS 434 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 R +A+ + G + E+W G+ + + Sbjct: 435 GRHDASFYATMWKHLVGEG-HWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISHFVGVFN 493 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 DI+ ++ +++L L D +T LPNR +D + H + A+ + + ++ +DLD FK Sbjct: 494 DISRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLLLVDLDRFKI 553 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRIL 338 +ND GH GD+LL VS +++ + +AR GGDEF ++ + +A I+ Sbjct: 554 INDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERAEDAAHVAETII 613 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 +L++PF I E++ S+GIA+ + G D ++ +AD AM+ AKE G+G + FTP+ Sbjct: 614 NQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKESGKGTYKFFTPD 673 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLD 457 MN + + L ++ LR+A++N +L++HYQPK+ + +EALVRW P RG+IPP + Sbjct: 674 MNIQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWVHPTRGVIPPGE 733 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQV 516 FI AEE+GLIVPLG V+ QV +W D G+ ++VAVN+S RQ + + + ++ Sbjct: 734 FIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQEPNLIEKVSEI 793 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L++ F +++E+TES + + + + +++ LG ++ +DDFGTGYSSLS L +FP Sbjct: 794 LRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTGYSSLSYLKKFP 853 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 + A+K+DQ FVRD+ S++ +I+++A+A+ L V+AEGVE+A++ FL + Sbjct: 854 LHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQMEFLRGQECQQV 913 Query: 637 QGFLFAKPMPAVAFERWYKRYLK 659 QGF +KP+P F +R + Sbjct: 914 QGFFLSKPLPPSDFLALLERQQE 936 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 194/551 (35%), Positives = 298/551 (54%), Gaps = 5/551 (0%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 L A +V A AI I DS GNI N TG +VIG++ L + Sbjct: 946 AEEQLRLAAKVFDRAGEAITITDSSGNIITVNDSFCRITGYSHQEVIGKNPRFLQSGKHG 1005 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 R G ++ E++ G+ + + + + +DI+ Sbjct: 1006 KDFYDAMWRSLIEQG-CWQGEIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIFSDISA 1064 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDA 283 + +Q R+ LA D +TG+PNR+ + D + HA+ A K + V+++DLDNFK +ND+ Sbjct: 1065 IKSSQRRIEFLATHDELTGIPNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFKVINDS 1124 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRL 343 GH GDQLL+ + + C+ LAR GGDEF+ + ++ S + ++A+RI+ L Sbjct: 1125 LGHDVGDQLLKQATERLKHCVRDSDTLARLGGDEFVAVLTDVSLEKVNSVAARIVDFLGA 1184 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 F I ++ S S+GI++ P+ G DS +++HADTAMY AKE GR Q+ F EM Sbjct: 1185 SFSINDKSLFVSASIGISVFPDDGQDSLTLLKHADTAMYRAKERGRNQYQFFADEMKVIA 1244 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYA 462 + L L+T LR ALE + YQP++ GEV EAL+RW+ P G + P FI A Sbjct: 1245 LQRLTLETGLRLALETKSFRMCYQPQVDIHTGEVVGAEALLRWRDPTLGEVSPAHFIPIA 1304 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELN 521 E GLI +G V V+ Q+A WR+KG+ + R+A+N+SA QL D + L Sbjct: 1305 ESCGLIGAIGETVFTMVLEQIAYWREKGLTVPRIAINVSAHQLRDAGFAAKVGSWLDSSG 1364 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 I +ELTES L+E ++ ++ F +G +V +DDFGTGYSSLS L + PI +K Sbjct: 1365 ISSELIGIELTESALMERIDMVKEMLTSFDGMGMKVSIDDFGTGYSSLSYLKKLPIHELK 1424 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ FV I + +S+ +AI+ +++AL ++V+AEGVES ++ L + G + QG+LF Sbjct: 1425 IDRSFVDGIALERDDRSIAKAIIDMSRALGMRVVAEGVESEEQLGVLKEEGCDMVQGYLF 1484 Query: 642 AKPMPAVAFER 652 +P+ AF + Sbjct: 1485 HRPLSPEAFAK 1495 Score = 67.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 6/146 (4%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 + + + R+ L +++ + SA+ + D+ G + N E+ GL +V Sbjct: 814 DHTDLVEAQEQIRESQERLL---SIMNHSTSAVSLKDAAGRYEFINMRFEELFGLSAEEV 870 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 IG++ +LF R+ V + +E + +++L +F S Sbjct: 871 IGKTDQQLFSRDIAQLLRSRDLEVMGQLSAIQHLEEMVFPTS--KVWLDSVRFPIFDSNG 928 Query: 212 NEIFLICSGTDITEERRAQERLRILA 237 + TD+T + A+E+LR LA Sbjct: 929 VVRAVCSQSTDVTMKHHAEEQLR-LA 953 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 832 bits (2152), Expect = 0.0, Method: Composition-based stats. Identities = 187/559 (33%), Positives = 288/559 (51%), Gaps = 6/559 (1%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 R E+V A I I D G I N TG D +GQS L Sbjct: 325 RRTAERQARLFERVFRNALEGICITDPEGIIVAVNPAFTTITGYPADDAVGQSPRLLKSH 384 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 ++A R G +E E+W G+ + + G + + D Sbjct: 385 HHDSAFYEDMWRALVEEGR-WEDEIWNRRRNGEVYPEWLSISAIPGPTGRTEYYVAVFHD 443 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKV 280 ITE + + +++ A+ D++TGLPNR ++D + AIN A KV V+ +DLDNFK+V Sbjct: 444 ITELKAKESQIQHQAHHDALTGLPNRALLRDRLGMAINGARREDRKVAVLSVDLDNFKQV 503 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILT 339 ND+ GH+ GD L+ + + + LAR GGDEF+V+ + + +A R+L Sbjct: 504 NDSLGHMVGDIYLQQAAEQMRQMVRPQDTLARVGGDEFVVVLQDVEGERDAAQVAERLLA 563 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 R P R+ E++ SVGIAL P+ G D ++R+AD AM AKE G+ ++ +FTP M Sbjct: 564 RFTDPVRVQEHELFVGASVGIALFPDDGDDPDTLVRNADIAMSRAKEQGKRRYHLFTPAM 623 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDF 458 N R L L+ +L +AL + HYQP++ G + +EAL RW + P +F Sbjct: 624 NDRAVRRLSLEGDLHRALAAGDITAHYQPRVDLNTGLITGMEALARWIRADGSQEHPAEF 683 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVL 517 I AE +GLIVPLG ++ + D G +L VAVN+S Q + + + VL Sbjct: 684 IPLAESTGLIVPLGEHMLRLACAKTRALCDAGHADLHVAVNLSVHQFRHRNLVGMVADVL 743 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 E +++E+TES ++ + + + + Q +++G + +DDFGTGYSSL QL P+ Sbjct: 744 AETGLPPHLLELEITESTIVTDVDHTIRKLNQLAEMGIALSVDDFGTGYSSLYQLKNLPL 803 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 ++K+D+ F+RDI P ++ I+ +A L L+V+AEGVE+ ++ FL G +E Q Sbjct: 804 TSLKIDRSFIRDIPDDPNDAAIAATIITMADRLGLRVVAEGVETPEQLNFLLLEGCHEVQ 863 Query: 638 GFLFAKPMPAVAFERWYKR 656 GFLF++P+P F R Sbjct: 864 GFLFSRPLPPDEFTALLAR 882 Score = 42.2 bits (99), Expect = 0.073, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 23/80 (28%), Gaps = 2/80 (2%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAE--QVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 + A + R + S A + A A+ + G I NR E +G Sbjct: 158 DVTALVEAEIEEEVRQRTAALAESTARFRALFELAPDAVYVRGEGGRIVDCNRAAERMSG 217 Query: 146 LKEHDVIGQSVFKLFMSRRE 165 ++ L E Sbjct: 218 HPRETLLSLRTADLLPPDIE 237 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 832 bits (2151), Expect = 0.0, Method: Composition-based stats. Identities = 202/595 (33%), Positives = 326/595 (54%), Gaps = 17/595 (2%) Query: 74 DLSVHLVGRKINKRE----WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS 129 D+ +HLV + +R+ ++ + + H R L L +A +++I DS Sbjct: 214 DVHMHLVADSVGQRDRVAIFSRDVTQSHQRRQQLRKLETAL-------EQAPVSVMITDS 266 Query: 130 RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWI 189 G I+ NR +G E +V+G++ +L S A+ R+ SG ++ EL Sbjct: 267 HGAIEYVNRAFVLVSGYSEDEVLGRNP-RLLKSGETVASLYRDMWHCLASGATWQGELCN 325 Query: 190 PTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRN 249 G + + + +IT+ + +++L A D++TGLPNR Sbjct: 326 RAKDGSLFWEYATISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRL 385 Query: 250 AMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHD 307 ++D + HAI A ++G+++LDLD FK VND+ GH+ GD+LL+ VS + L Sbjct: 386 LLEDRVHHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRS 445 Query: 308 QVLARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEH 366 +AR GGDEF+V+ ++ S + L +A +I L P + +V+ S+GIA+ P+ Sbjct: 446 DTVARLGGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDD 505 Query: 367 GSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHY 426 G + A+++ ADTAMY AK+ GR FC + MN + L L+ LR+AL + + Y Sbjct: 506 GDNFNALMKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFY 565 Query: 427 QPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAK 485 QP++ G +EAL+RW SPERG + P FI AEES LI +G WV+ + RQ+A Sbjct: 566 QPQVDLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAA 625 Query: 486 WRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELAL 544 WR+ G+ ++VAVN+S RQ + + + ++ + +++ELTES ++ + A+ Sbjct: 626 WREAGLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAI 685 Query: 545 SVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIV 604 + + ++G QV +DDFGTGYSSLS L R P+ IK+D+ FVRD++ Q + ++V AI+ Sbjct: 686 EQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAIL 745 Query: 605 AVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 +A AL++ ++AEGVE+ E+ L G + QGF +AKPMPA W R + Sbjct: 746 GLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWMLRQGR 800 Score = 58.4 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 6/119 (5%) Query: 116 VVSEAHSAIVILDS-RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 ++ E+ + + G + NR TG+ IG S + F + R Sbjct: 13 ILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARRHFADDDQR---LEVVR 69 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 +G + ++ G + + +G+ + D+++ ++A++ + Sbjct: 70 QLKEAGEIADADVKFFRVDGSSFWSVLTIRSATLNGEAVN--LAWLYDVSKRKQAEQAI 126 Score = 58.4 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 79/222 (35%), Gaps = 15/222 (6%) Query: 16 SHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQA-ARIREMTVITSSLMMSLTVDESD 74 P + S+ + E R L+ + E A A ++ V SS LT+ + Sbjct: 43 GMTPEQCIGHSARRHFADDDQRLEVVRQLKEAGEIADADVKFFRVDGSSFWSVLTIRSAT 102 Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQ 134 L+ V W + S + + G + ++ + IV++++ G I Sbjct: 103 LNGEAV-----NLAWLYDVS---KRKQAEQAILDGKTLIRAMLDSSTDGIVLVNAEGTIL 154 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 N D+ G++++ A R +RV R + G Sbjct: 155 AVNAAASAIFEKNSDDLPGKAIWDHLPDSVVAPMRRGIDRVLDRRET-----VESHHAIG 209 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 +LF V G+ + I S D+T+ + +++LR L Sbjct: 210 AKLFDVHMHLVADSVGQRDRVAIFS-RDVTQSHQRRQQLRKL 250 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 831 bits (2148), Expect = 0.0, Method: Composition-based stats. Identities = 200/649 (30%), Positives = 324/649 (49%), Gaps = 18/649 (2%) Query: 24 TESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDE-SDLSVHLVGR 82 T + +L + +AE ++ ++ L + + V+ S++ + Sbjct: 686 TNPNGLLILDLQGKV---LFVNPAAEILFGRKQEDLMGQILGIPIIVNNYSEIEILQPSG 742 Query: 83 KINKREWAGNASAWHDTPAVA---------RDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 K+ W + A + L Q ++ ++VI D+ G I Sbjct: 743 KLIIVRMRLVKIIWQEKNAFLASLVDVTDIQQAQEQLKILYQATEQSPVSVVITDAEGTI 802 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 + N E TG + +VIGQ+ L ++ + SG + E Sbjct: 803 EYVNPKFEKITGYQRAEVIGQNPRILKSGETTTEEYKQIWKT-ITSGQEWHGEFHNKKKN 861 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G+ + + + + DITE + Q L AN D++TGLPNR D Sbjct: 862 GELFWEAASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLPNRFLAID 921 Query: 254 LIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 + AI AD +V V+++DLD+FK VND GH +GD LL+ VS + CL +A Sbjct: 922 RLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVA 981 Query: 312 RPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDS 370 R GGDEFL++ N + + +AS+IL+ L PF + E + S S+GI L P+ G+D Sbjct: 982 RLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDV 1041 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 + ++R+AD AMY K GGR F +T MN+ L ++ LR AL+ ++ + YQP I Sbjct: 1042 SVLMRNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPII 1101 Query: 431 TWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 R + V EAL+RW +PE G + P FIS AEE+GLI LG WVI ++V W+ + Sbjct: 1102 DLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQ 1161 Query: 490 GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 G + VAVN+S RQ + + + + +++E+TE L+E+ + +I+Q Sbjct: 1162 GSPIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQ 1221 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 ++ ++ +DDFGTGYS+LS L +FP + +K+D+ F+ DI +LV+ I+A+ Sbjct: 1222 LHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHG 1281 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 L LQVIAEGVE+ ++ L G + QG+ F++P+ + F R+ + + Sbjct: 1282 LKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEFRRYLQSHQ 1330 Score = 78.8 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 64/198 (32%), Gaps = 16/198 (8%) Query: 49 EQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSH 108 E A+ ++ ++ + + +L +E++++++++ + L Sbjct: 380 ELIAKKKDKSLFKAQVSANLVKNEANIAIYIMI----------SVMDVSQQQGTEESLQK 429 Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 L + A I D G N +G+ IG + A Sbjct: 430 LLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMGWANYVHNDDRARV 489 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 ++ ++ E G ++ + + + TDITE + Sbjct: 490 FNE-WIKSIQTQTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLGTLTDITERKN 548 Query: 229 AQE---RL--RILANTDS 241 A+E ++ ++ A D+ Sbjct: 549 AEEATNKINAQMQAIFDA 566 Score = 69.1 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 28/213 (13%), Positives = 66/213 (30%), Gaps = 25/213 (11%) Query: 44 LQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVA 103 L+ EQ +R + + +++ R D+ Sbjct: 223 LKTQIEQFSRSNQEENKCKIF-IKTQLEQQRFEAKFTRRAEGTAVTLTRLFDLPDSQTNV 281 Query: 104 RDLSHGLS-------------------FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + L L E ++ + SAI I D +GN+ N+ + Sbjct: 282 QQLEKRLKPEVTPKDNPHNPPSENRISIKEFAITSSISAIAIGDLQGNLTYVNQAFLEMW 341 Query: 145 GLK-EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNK 203 + +V+G+ + ++ + R+ + EL + Sbjct: 342 RYDNDDEVLGKPFLNFWQIDQQGETLIQ----TIRTRGQWIGELIAKKKDKSLFKAQVSA 397 Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 + I+++ S D+++++ +E L+ L Sbjct: 398 NLVKNEANIAIYIMISVMDVSQQQGTEESLQKL 430 Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 26/151 (17%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH 149 + S T R+ L ++S + ++ILD +G + N E G K+ Sbjct: 660 VRDISDRKQTELALRESEERLK---TIISTNPNGLLILDLQGKVLFVNPAAEILFGRKQE 716 Query: 150 DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS 209 D++GQ + + + E+ I G+ + + Sbjct: 717 DLMGQILGIPIIVNNYS-------------------EIEILQPSGKLIIVRMRLVKIIWQ 757 Query: 210 GKNEIFLICSGTDITEERRAQERLR--ILAN 238 KN + S D+T+ ++AQE+L+ A Sbjct: 758 EKNA--FLASLVDVTDIQQAQEQLKILYQAT 786 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 831 bits (2148), Expect = 0.0, Method: Composition-based stats. Identities = 189/604 (31%), Positives = 319/604 (52%), Gaps = 17/604 (2%) Query: 65 MMSLTVDESDLSVH--LVGRKINKREWAGNASAWHDTPAVA--RDLS---HGLSFAEQVV 117 ++ +T E + ++ L+ I ++ S W + R++ LS A QV Sbjct: 342 LLQVTHQEDQVQIYIFLLLATIFSLGFSLLFSGWLNRKFTEYHREIESKQRALSLASQVF 401 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 A I++ S + N D TG +V+G++ L R + R+ Sbjct: 402 DNASEGIMVTGSDNRLLTVNDAFVDITGYSADEVVGKNPKFLQSGRHD-ETFYRSMWQMI 460 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + + E+W G+ + + + S I S TD+TE ++ +E+LR L+ Sbjct: 461 NTSGYWRGEIWNRRKNGEVFPQWLSIQAVTDSAGMARNYIASITDLTERKQVEEKLRYLS 520 Query: 238 NTDSITGLPNRNAMQDLIDHAINHADNN---KVGVVYLDLDNFKKVNDAYGHLFGDQLLR 294 + D +T LPNR + +D ++ + + ++Y+DLD+FK +ND+ GH FGD++L+ Sbjct: 521 DFDPLTNLPNRRLLGYRVDQTLSLSRRQPDQQFALLYIDLDHFKNINDSLGHRFGDEILQ 580 Query: 295 DVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVY 353 V+ I + ++R GGDEF++L + +A RIL + P + Sbjct: 581 KVAKRITELVREGDTVSRLGGDEFMILMPELHKLEQAANLAERILHNIAQPLENDSH-LM 639 Query: 354 TSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNL 413 + SVGIA+ P G ++R+AD A++ AK GR + +T EMNQR E L ++ +L Sbjct: 640 ITPSVGIAVYPNDGDSFDKLLRNADAAVHFAKRQGRNNYQFYTAEMNQRASERLQVEISL 699 Query: 414 RKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLG 472 RKA+EN + + YQP++ R G + +EAL+RW+ P GL+PP FI AEE+GLI+ +G Sbjct: 700 RKAVENQEFELFYQPQLNLRDGSLAGVEALIRWRHPNEGLVPPNRFIPLAEETGLILQIG 759 Query: 473 RWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVEL 531 WV+++ RQ A+W K ++VN+S RQ + ++ L + +E+ Sbjct: 760 SWVLVEACRQGAEWAAKSTEPFTMSVNVSVRQFR-PELVEEVRSALLTSGLSPKSLVIEI 818 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TES L++++E L+++ + +LG Q+ LDDFGTGYSS++ L RF +D +K+D+ F+ D+ Sbjct: 819 TESTLMQDEEKTLTLLHELKELGVQLSLDDFGTGYSSMAYLKRFNLDQLKIDRAFISDLP 878 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF- 650 + P ++ AI+ VA L +AEG+E ++ FL G E QG+ + KP+PA Sbjct: 879 QNPDDAAITSAIIDVASHFGLVTVAEGIEKPEQAEFLASVGCIEGQGYYYEKPIPANDLT 938 Query: 651 ERWY 654 ER++ Sbjct: 939 ERYF 942 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 831 bits (2147), Expect = 0.0, Method: Composition-based stats. Identities = 182/560 (32%), Positives = 292/560 (52%), Gaps = 7/560 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 + + + + + + + A+VI D+ I NR E TG + IGQ+ L Sbjct: 490 ERQKREERMRLSSRFLEDTNEAVVITDADARIIEVNRAFEKLTGYSRQEAIGQNPRIL-Q 548 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 S A R + +E ELW + + + + Sbjct: 549 SGHYDADFYREMWDTLLTTGHWEGELWSRRKNNELHPKWLSISAVYDQRGRITHYVGISN 608 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKK 279 D+T ++ QE+L L + D +T LPN +D + A+ A +KV ++ DLD FK+ Sbjct: 609 DLTATKQTQEKLEELTHYDQLTSLPNILLFRDRLQQAMARARREEHKVALLIFDLDRFKE 668 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRIL 338 VND+ GH GD +L +V+ + L + RPGGDEF +L + A +L Sbjct: 669 VNDSLGHSVGDLVLTEVAQRLRQQLSLADTICRPGGDEFYLLLGRLTDIDTAVQAAQNVL 728 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 PF+ ++Y + S+GI L P+ G + ++I+ +TAMY AK+ G F F Sbjct: 729 ELFSKPFQAADHQLYLTPSIGITLFPDDGEEVESLIQSVETAMYHAKKDGGNSFQFFQET 788 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERG-LIPPL 456 M + + LR+A+E ++ ++YQPKI G V EAL+RW PERG + P Sbjct: 789 MFTAALGRMTMKNRLRRAVELEEFELYYQPKIAADGRTVVGAEALIRWVQPERGGPVSPA 848 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQ 515 +FI AEE+GLI+P+G WV+ RQ W+ G+ LR+AVN+SA Q + + Sbjct: 849 EFIPLAEETGLIIPIGEWVLRQACRQSLLWQQAGLPPLRIAVNLSAVQFKQPGLDDEINW 908 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 +LQE+ +++E+TES L+E+ A + + + +G + LDDFGTGYSSLS L F Sbjct: 909 ILQEIGLPAELLELEITESLLMEDVTTANATLWKLKDMGIHLALDDFGTGYSSLSYLKNF 968 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P+D +K+D+ FVRD+ ++++ I+ +A +L ++V+AEGVE A + AFL + G + Sbjct: 969 PLDTLKIDREFVRDLSTDDEDRAVIITIITLAHSLKMEVVAEGVEDADQVAFLRQRGCDV 1028 Query: 636 RQGFLFAKPMPAVAFERWYK 655 QG+ F++P+PA FE++ + Sbjct: 1029 FQGYHFSRPLPAKEFEQFLR 1048 Score = 89.9 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 7/175 (4%) Query: 66 MSLTVDESDLSVHLVGRKIN-KREWAGNASAWHDTPAV---ARDLSHGLSFAEQVVSEAH 121 L V + V + + + + ++ D A+ + + L ++V + Sbjct: 326 QPLEVAGKVVGVLALFTRYRLPASISDSLASLADLIALGLERKQNENRLLTQARIVDQIR 385 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 AI+ D G I +N+ + G + ++ E + R Sbjct: 386 DAIITTDPAGLIMTWNQGAQRLFGYTAQEA-SHRPLSFLLAPHELDFYQGQVLPQLRERL 444 Query: 182 AYEVELWIPTCKGQRLFL--FRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 +Y++E+ + T G R F +F G G +IC DITE ++ +ER+R Sbjct: 445 SYQIEIEVQTKHGDRRFADFSLTQFSPEGGGSTRGGIICYARDITERQKREERMR 499 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 829 bits (2144), Expect = 0.0, Method: Composition-based stats. Identities = 183/580 (31%), Positives = 307/580 (52%), Gaps = 12/580 (2%) Query: 81 GRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLC 140 G +I E + S + + L+HG + + SA+VI D++G I+ N+ Sbjct: 451 GERIGAIEAIRDISDRKQSELFLKKLTHG-------IENSASAVVITDTQGVIEYVNKKF 503 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 TG + +G++ L + SG + EL G+ + Sbjct: 504 IQLTGFSLEEAVGKNPRILKSEATPPEVFVDLWKTIL-SGREWRGELLNRRKNGEVYWSI 562 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 + I + DI E + A+ + LA D +T LPNR +QD ++ A+ Sbjct: 563 TSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYFDPLTDLPNRRMLQDRLELALR 622 Query: 261 HADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 + + V ++YLDLD+FK VND+ GH GD LL++++ + D V+ R GGDEF Sbjct: 623 RSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMAGRFSGVVRDDDVVCRLGGDEF 682 Query: 319 LVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 ++ + Q + +A +++ + P + EV + S+GIAL P G D + +HA Sbjct: 683 ALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTASIGIALFPRDGGDVKNLEKHA 742 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEV 436 D A+Y AKE G+ F + E+N + + L+ LR A E +L +HYQPK+ G+V Sbjct: 743 DIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRYAKERQELELHYQPKVCVASGKV 802 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVA 496 +EAL+RW SP+ GL+ P+ FI AE++ LI+P+G WV+ Q +WR++G+ L +A Sbjct: 803 SGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWVLRTACLQQVQWREQGLLLNMA 862 Query: 497 VNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQ 556 VN+SA QL + + ++ E + +++ELTES L+ N + + ++++ LG Sbjct: 863 VNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESALVNNPDEVVQLLERLRTLGCS 922 Query: 557 VHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIA 616 + +DDFGTGYSSLS L FP+ +K+D+ FVRD+ +++ R++V +A L+++ +A Sbjct: 923 ISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSGDRAIARSVVDLANNLDMKTVA 982 Query: 617 EGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 EGVES ++ L + G QGF++++P+ A +R Sbjct: 983 EGVESEEQLTILQQIGCTYIQGFIYSRPVQADQVSAVVRR 1022 Score = 64.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 70/194 (36%), Gaps = 26/194 (13%) Query: 59 VITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVS 118 IT S++++L++ L+G + +RE A A AR ++ Sbjct: 297 AITFSIIVALSISA------LIGFQGYQREQLAKARAVEQALLDARQ------QLNDIID 344 Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV---FKLFMSRREAAASRRNNRV 175 A+ ++D + +NR E +G+ + +++G+ F +R + Sbjct: 345 FFPDAVFVIDRNKRVTIWNRAIEKMSGVPKEEMLGKGDHEYSIPFYGQRRTQLLDLLDLD 404 Query: 176 FFRSGNAYE-----VELWIPT------CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 Y E+ G+ +++ + I I + DI+ Sbjct: 405 DAELAAKYSNIRRVGEVLDAETFCPALHDGKGAYVWATGVPLYNAAGERIGAIEAIRDIS 464 Query: 225 EERRAQERLRILAN 238 + ++++ L+ L + Sbjct: 465 DRKQSELFLKKLTH 478 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 193/594 (32%), Positives = 312/594 (52%), Gaps = 11/594 (1%) Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLS-HGLSFAEQVVSEAHSAIVI 126 + ++ + + +++ G + A+ R+ S H L A+ I I Sbjct: 388 IMIERDHAASTVTSQELGALMSIGRSFG----VAIQRESSDHRLHQAKIAFESTAEGIFI 443 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D N+ D TG E DV+G L ++ R + R G + E Sbjct: 444 TDDELRTIAINQGFTDITGYTEDDVLGNIPNVLEADLKKPEPHREIWKALTREGR-WRGE 502 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 W ++ + + I + DI+E + +Q RL L N D +TGLP Sbjct: 503 FWNQRKNNEQYAEWVTLTAVNNEEGKVINYVGVFADISEIKHSQSRLNELVNRDPLTGLP 562 Query: 247 NRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR M +L+DHAI +A+ + + ++++DLD FK +ND GH GD+LL +VS I + + Sbjct: 563 NRRLMHELLDHAIKYAEREQNEIALLFVDLDRFKAINDTLGHQMGDKLLFEVSQRIRAAV 622 Query: 305 EHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 +AR GGDEF+V+ + +A +I++ L+ F I E++ S SVGI++ Sbjct: 623 RDSDAVARLGGDEFIVMMDVLREREDAAKVAKKIISSLQNEFLIDGRELFISASVGISVY 682 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P+ D +I+ AD AMY K G+ C ++ +++Q E L+ LR+AL DQ Sbjct: 683 PDDSLDVDGLIKAADIAMYQVKNKGKNNHCFYSADLSQNAVERFTLENQLRRALARDQFE 742 Query: 424 IHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 ++YQ +++ G + E+L+RW PE G++ P FI AEE+GLI+P+G WV+ Q Sbjct: 743 VYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPLAEETGLIIPIGEWVLRQSAMQ 802 Query: 483 VAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 V +W D+G ++ V+VN+S Q+ + +L E + E +++E+TES ++ N E Sbjct: 803 VKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVETDCESHLLELEITESTVMHNTE 862 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 + V + LG ++ +DDFGTGYSSLS L R P+D IK+DQ FVRD+ ++ Sbjct: 863 YVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDDAAIAT 922 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 AI A+AQ+L VIAEGVE+ ++ +FL K G + QG+L+++P+ A F + Sbjct: 923 AINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYLYSRPVTASEFTALLR 976 Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 6/147 (4%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 + A +L L+ +++ + I + D G N L + G Sbjct: 107 QDVTERFASEYELRSMLNLLRKLIDASPDYICLKDGAGRWLHANTSGLSLLHLNGVNTQG 166 Query: 154 QSVFKLFMSRREA-AASRRNNRV----FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 ++ +L ++ + + +G E +P G R+ + Sbjct: 167 KTDRELADLTHPNLRDFMQHWQAADEYVWETGQLLREEETVPLPGGDRVLDVIKVPLFHD 226 Query: 209 SGKNEIFLICSGTDITEERRAQERLRI 235 G ++ G DIT+ ++ + +LR Sbjct: 227 DGSR-HGIVTLGRDITDRKQVESQLRQ 252 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 829 bits (2143), Expect = 0.0, Method: Composition-based stats. Identities = 199/561 (35%), Positives = 290/561 (51%), Gaps = 6/561 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 R L A V I I D G IQ N TG E +VIG L Sbjct: 248 ERRAAEERLRQAATVFDNTVEGISITDRDGIIQSVNPAFSRITGYAEAEVIGCHTRILQS 307 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 R A R R R+G ++ E+W G+ + + + Sbjct: 308 GRHGADYYRAMWRTLARTGQ-WQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVSNYVAVFS 366 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKK 279 DI++ + AQ +L LA+ D +TGLPNR + D + HAI+ A V V++LDLD FK Sbjct: 367 DISQIKDAQSQLERLAHYDPLTGLPNRALLGDRLAHAISRARRAGTSVAVLFLDLDGFKN 426 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRIL 338 VND+ GH GD+LL+ ++ + L + ++R GGDEF V+ + A+ +A ++ Sbjct: 427 VNDSLGHPAGDRLLQIIAERLCGALRSEGSVSRFGGDEFAVVLEDVVRGEAVSEVAEHLI 486 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 + P + + S S+GIAL P G D+T +I+ ADTAMY +K GR F + Sbjct: 487 AEIARPLDLDGHGAHVSASIGIALFPRDGDDATTLIKAADTAMYRSKALGRNTFSFHHED 546 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 M Q L L+ LR+ALE + + YQP+I R G + EAL+RW+ PERGL+ P + Sbjct: 547 MAQAAHRRLSLEHGLRQALEQGRFELWYQPQIDLRTGVLAGAEALLRWRDPERGLVSPAE 606 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQV 516 F+ AEE+GLI+P+G WV+ + R W D G+ R+AVN++A Q+ A+ +V Sbjct: 607 FVPLAEETGLILPIGLWVLEEACRAGRAWLDVGLAPGRIAVNVAAPQIERGGFDQAVARV 666 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L ++VE+TE L+ + E A + LG V +DDFGTGYSSL+ L Sbjct: 667 LSASGLPPAALEVEITEGSLLRSAENARLAVAALRALGVGVAIDDFGTGYSSLAYLKNLA 726 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 + +K+D+ FVRD+ + ++ RAI+A+ ++L V+AEGVE + AFL G Sbjct: 727 VQTLKIDREFVRDLPHDAGNLAITRAIIAMCRSLGFGVVAEGVEEPAQAAFLVSEGCTLA 786 Query: 637 QGFLFAKPMPAVAFERWYKRY 657 QG+LFAKPMP F W + Y Sbjct: 787 QGYLFAKPMPGAEFAEWLRTY 807 Score = 74.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 1/118 (0%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 F + V+ + + D+ G N D+ G ++G+SVF+L AA Sbjct: 5 FLQNVLDAIPAPVFFKDAAGRYLGCNTAFLDFLGYTADRILGKSVFEL-SPPDLAARYHA 63 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 ++ F + E + +G+R + K + L+ + DIT+ ++A Sbjct: 64 QDQALFDNPGEQVYEAQVQNARGERREVVFYKATFHDTEGKVAGLVGTILDITDRKQA 121 Score = 72.6 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 56/157 (35%), Gaps = 5/157 (3%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 G D R + ++ A+ + D G N + GL E Sbjct: 108 LVGTILDITDRKQAERRVRESEERLGALIQALPDAVFLKDGEGRWLVTNGAAQALFGLAE 167 Query: 149 HDVIGQSVFKLFMSRREAAASR----RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 D G++ +L A RN+ + ++ G ++ + +G+RL + Sbjct: 168 RDWFGRTDLELGSEDPARAEVHAVCARNDELVWQQGGMRQMLEIVEDGQGRRLVFEATRI 227 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILAN-TD 240 S ++ G DITE R A+ERLR A D Sbjct: 228 PLFDSVGQRKGIVVVGRDITERRAAEERLRQAATVFD 264 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 829 bits (2142), Expect = 0.0, Method: Composition-based stats. Identities = 190/599 (31%), Positives = 307/599 (51%), Gaps = 16/599 (2%) Query: 71 DESDLSVHLVGRKI--NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD 128 D+++ HL G++ E G D R L A + + I D Sbjct: 456 DQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQ-RRQTEAELRIAAIAFE-SEQGMAITD 513 Query: 129 SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW 188 +G + R NR TG + +GQ+ L R +AA R G A++ E+W Sbjct: 514 PQGVMLRVNRAFSAITGYSAPEAVGQNPRLLSSGRHDAAFYAAMWDSLVREG-AWQGEIW 572 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 G+ + + + TD++ + A+++++ LA D++TGLPNR Sbjct: 573 NRRKNGEVFPEWLTISAVKDPAGQATHYVATFTDLSTRKSAEDQIKSLAFYDTLTGLPNR 632 Query: 249 NAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 + D + A+ + ++Y+DLD+FK +N+ YGH GDQLL++V+ + L Sbjct: 633 RLLLDRLKQALASGARHRRQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRLSHYLRA 692 Query: 307 DQVLARPGGDEFLVLASNTSQSALEAM------ASRILTRLRLPFRIGLIEVYTSCSVGI 360 +ARPGGD F+VL S +++EA +I L P++I ++ S+G+ Sbjct: 693 GDTVARPGGDSFVVLLEALSTNSVEAATEAENTGEKIRLALSQPYQIADHAHRSTASIGV 752 Query: 361 ALSPEHGSD-STAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 L + + ++ A+ AMY AK GR F P+M V L+ +LR+A+ + Sbjct: 753 TLFDDRQQEGIDEPLKRAELAMYQAKTAGRNTLRFFDPQMQTAVMAMAALEADLREAVRS 812 Query: 420 DQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 +Q +++YQ +++ +V +EALVRWQ P RGL+PP +FI AE++GLI+PLG+WV+ Sbjct: 813 NQFLLYYQAQVSGERQVAGVEALVRWQHPVRGLVPPAEFIPLAEQTGLILPLGQWVLETA 872 Query: 480 VRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 Q+A W + + +L VAVN+SA Q + L+ + +ELTES L+ Sbjct: 873 CAQLAAWASQPERAHLTVAVNVSALQFHQADFVAQVLAALKRAGANPQRLKLELTESLLV 932 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 + E ++ + + G LDDFGTGYSSLS L R P++ +K+DQ FVRDI Sbjct: 933 HDAEDVIAKMITLKEQGVGFSLDDFGTGYSSLSYLKRLPLNQLKIDQGFVRDILHDANDA 992 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 ++ + +VA+A L L VIAEGVE+ + FL G + QG L+++ +P AFE + ++ Sbjct: 993 AIAKMVVALADTLGLSVIAEGVETEAQRDFLAAQGCHAYQGHLYSRALPIDAFEAFMRQ 1051 Score = 73.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 3/168 (1%) Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 L + + E ++ L + +Q++ + AI + Sbjct: 333 RLAAMADEKQALRALPVTHPDEIGQVVKGFNRLLGT---LGQREALLQQILDTSSVAIFL 389 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 +D +G I + N+ G H++ G L + + + + + ++E Sbjct: 390 VDRQGRITKANQRMATLFGYPLHELQGMEYVALVHPAQRETGRKNMLALLDSALQSVDLE 449 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + E L+ DIT+ R+ + LR Sbjct: 450 RLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQRRQTEAELR 497 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 828 bits (2140), Expect = 0.0, Method: Composition-based stats. Identities = 190/585 (32%), Positives = 312/585 (53%), Gaps = 8/585 (1%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 + R A S D + ++ L + V I+I D I R N + Sbjct: 517 RTADRNIAFIISVIEDISS-QKENEAILRQSATVFDNTREGIMITDKNAQIIRVNPAFAE 575 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 G +H++ G++ +F S + ++ R + + E+W + L + Sbjct: 576 LFGFSQHELQGKTP-VIFKSGKHTHEFYQHIRDSLNTSAFWRGEIWNRRKDNHIIPLICS 634 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA 262 + + +DI++ + ++ +L LA+ D +T LPNR + + HAI+ A Sbjct: 635 ISAVRNDKQQLTHYVSVYSDISKLKASEAKLAHLAHHDPLTQLPNRTLLTINLSHAIDLA 694 Query: 263 --DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV 320 +++++ ++ LDLD FK VND++GH GD LL++V+ + + + R GGDEF V Sbjct: 695 VRNHHRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRRVRISDTICRLGGDEFTV 754 Query: 321 LAS-NTSQSALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHAD 378 L N + +E A IL L+ PF + EV S+GI+L PEHG +++ AD Sbjct: 755 LIEGNPALHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGISLYPEHGQTPKELLQQAD 814 Query: 379 TAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVR 437 AMY AK GR F F+ E+ + + L L+ L++AL ++L +++QP+I + Sbjct: 815 AAMYRAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNELCLYFQPQIDISSNRII 874 Query: 438 SLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVA 496 EALVRWQ P GLI P FI AEE+GLI LG WV+L+ RQ +W+ KG+ + +A Sbjct: 875 GAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEACRQGKEWQQKGLPAINLA 934 Query: 497 VNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQ 556 VNIS Q + I ++ L++ + +++ELTES L+ ++ A+ ++ + G + Sbjct: 935 VNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTHENEAVEILSALRKYGIR 994 Query: 557 VHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIA 616 + +DDFGTGYSSL+ L RFP+D +K+D+ FV DI + + AIVA+A L L+V+A Sbjct: 995 LAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEIAAAIVAMAHTLRLKVLA 1054 Query: 617 EGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 EGVE+ ++ FL + G + QG+L + P+PA FE+ + + + Sbjct: 1055 EGVETEEQLTFLKEQGCDCYQGYLMSPPVPADQFEQLLRAQAEDS 1099 Score = 71.1 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 52/149 (34%), Gaps = 2/149 (1%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR-GNIQRFNRLCEDYTGLKEHDVI 152 + + + R S + + I + G+ RFN D G ++ Sbjct: 403 QQYTNQLELQRQTSEKDRLLKHFFELPLFGMAITHGQTGHWIRFNHQLSDLLGYSHSEMA 462 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 ++ L + + A ++ + Y E + GQ +++ + + +N Sbjct: 463 EHTLLSLTANEYQEADIAAMYQMTQDLCDGYLCEKQLRRKDGQLIYVNVDTRCVRTADRN 522 Query: 213 EIFLICSGTDITEERRAQERLRILAN-TD 240 F+I DI+ ++ + LR A D Sbjct: 523 IAFIISVIEDISSQKENEAILRQSATVFD 551 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 828 bits (2140), Expect = 0.0, Method: Composition-based stats. Identities = 182/571 (31%), Positives = 292/571 (51%), Gaps = 12/571 (2%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 H + + L A + IV+ + NI R N+ D TG + + G+ Sbjct: 398 HTDITERKKIEQQLRIAATAFE-SQEGIVVTNENFNILRVNQAFIDITGYEAEEATGKKP 456 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 L S R++ RN R ++ E+ G+ + Sbjct: 457 NIL-KSGRQSGEFYRNIYTSLRETGSWSGEIINRRKNGEIYPEHLTITAVKDADGQTTNY 515 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDL 274 + TDI+ + A ER+ LA D +T LPNR D + A+ + N +V+LDL Sbjct: 516 VGMFTDISVAKAASERIENLAFFDPLTNLPNRRLFSDRLTQALVNSTRSGNYGALVFLDL 575 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-- 332 D+FK +ND GH +GD LL+ V+L + +C+ +AR GGDEF++L N S + +EA Sbjct: 576 DHFKSLNDTLGHDYGDMLLKQVALRLSNCVREGDSVARLGGDEFVLLVENLSANDVEAAH 635 Query: 333 ----MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 + +IL L P+++ E ++ S+GI+L H S +++HAD AMY AK+ G Sbjct: 636 QIEAIGDKILMSLNQPYQLQSHEYLSTPSIGISLFNGHQESSEDLLKHADIAMYQAKKAG 695 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSP 448 R F P M + + + L+ L+KA+E Q ++YQ ++ G+ EAL+RW+ P Sbjct: 696 RNTLRFFDPLMQETINMRVDLERELKKAIEQKQFELYYQVQMNSAGQPSGAEALIRWRHP 755 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR--DKGINLRVAVNISARQLAD 506 ERG+I P+ FI AEE+GLI +G WV+ Q+ W+ + +A+N+SA+Q Sbjct: 756 ERGIISPIQFIPVAEETGLITQIGEWVLNQACLQLQAWQLDQASKDFSLAINVSAKQFLQ 815 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 +K ++ + + + +ELTES LI+N E + + ++G Q LDDFGTGY Sbjct: 816 PDFANQVKNSIRSFHIDNTKLKLELTESMLIDNIEYVIHTMNTLGEIGIQFSLDDFGTGY 875 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSL L P+ +K+DQ FVRD+ ++++V I+ +A +L L VIAEGVE+ ++ Sbjct: 876 SSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTIVLTIITMAHSLGLNVIAEGVETDEQLQ 935 Query: 627 FLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 L +G QG+ F++P+ F Y ++ Sbjct: 936 LLNAHGCGNYQGYYFSEPLSINEFNHQYMQF 966 Score = 58.4 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 57/158 (36%), Gaps = 14/158 (8%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI----VILDSRGNIQRFNRLCEDY 143 E A A + ++ FA + A + + D ++ ++ Sbjct: 266 EVARRTQALKENIEELKNSEFRWKFA---IEGAGDGVWDWNIATDEAQY----SKRWKEM 318 Query: 144 TGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA--YEVELWIPTCKGQRLFLF- 200 G E++++ + + A + + G Y VE + + ++ Sbjct: 319 LGYDENELLPTNQEWADRVHHDDVAYVKQTMQDYLEGKTALYVVEYRLKCKDNRYKWILG 378 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 R V N + +I + TDITE ++ +++LRI A Sbjct: 379 RGMIVSRDDQGNPLRMIGTHTDITERKKIEQQLRIAAT 416 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 187/560 (33%), Positives = 313/560 (55%), Gaps = 7/560 (1%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 + R L +V +I+I D+ I N+ TG + ++IGQS L Sbjct: 670 SARRRAEATLELWGRVFECTSESIMITDAAQRIVSVNQAFCATTGYRAEEIIGQSSLALR 729 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 + R+ R + G +++ E W G+ + I Sbjct: 730 SDVHDGIYFRQLWRGIRKRG-SWQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNYIALF 788 Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFK 278 TDI+ ++ ++R++ +A+ D++T LPNR + + A+ A N V V+++DLD+FK Sbjct: 789 TDISAQKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDLDHFK 848 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA--LEAMASR 336 +ND+ GH GD +L + + + ++R GGDEF+++ ++ S E M R Sbjct: 849 NINDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDSHQIEEIMKHR 908 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 +L +R P+ G E++ SCS+GI++ PE G D ++R+ADTAMY AKE GR + +T Sbjct: 909 LLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNYHFYT 968 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPP 455 E+N R + L ++T+LRK +E ++L++HYQPK+ G+ LEAL+RWQ P+ G+I P Sbjct: 969 EELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPDHGMISP 1028 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALK 514 ++FI AEE+GLI+P+G+ VI + RQ+++W G+ ++ +++N+SA Q D+ L Sbjct: 1029 MEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFVEDLV 1088 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 Q+++E I++ELTE+ L+E+ + V++ G +DDFGTGYSSL+ L R Sbjct: 1089 QLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLNYLHR 1148 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 FPID +K+D+ F+R + ++P ++++AI+ + L++QVIAEGVE E L G + Sbjct: 1149 FPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRAAGCD 1208 Query: 635 ERQGFLFAKPMPAVAFERWY 654 QG+ A+P+ W Sbjct: 1209 GIQGYFVARPLTPEQVPEWL 1228 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 192/558 (34%), Positives = 305/558 (54%), Gaps = 8/558 (1%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 ++ L + + ++ ++VI D G I+ N TG +VI Q+ L S Sbjct: 679 SKQSESQLKKLSRAIEQSPVSVVITDPEGRIEYVNPKFTQLTGYTLEEVIAQNPRIL-KS 737 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 + + SG + EL G + + I I D Sbjct: 738 GNLLPSVYDSLWKTITSGKEWYGELENKRKDGSIFWESASISPLFDESGKIINFIGVKED 797 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKV 280 IT+ + ++RL +A D +TGL NR + D ++ A++ + +K V V+ LDLD FK + Sbjct: 798 ITQRKLNEKRLEYMATHDGLTGLANRTLLYDHLEIALHQSQRSKKLVAVILLDLDRFKVI 857 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE-AMASRILT 339 ND+ GHL GDQ+L+ V + + +AR GGDEF+VL ++ + +A +L Sbjct: 858 NDSLGHLVGDQVLKAVGQRLKQYVRSTDTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLR 917 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 +L PF + E+Y S S GI LS D T ++R+AD AMY AK G G + ++ EM Sbjct: 918 KLNEPFFLHGRELYVSASFGICLSETDNVDGTILLRNADIAMYKAKAEGCGLY-FYSHEM 976 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDF 458 N+ + + L ++ +LR+ALE ++ ++YQPK+ G + EAL+RW+ P+RG+IPP +F Sbjct: 977 NEHLIKTLEMENSLRQALEKNEFQLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEF 1036 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQ-TIFTALKQV 516 I AEE+GLIV +G WV+ + RQ W +G+ L +AVNISARQ + A+K Sbjct: 1037 IPLAEETGLIVQIGHWVLAEACRQSKIWETEGLPPLTMAVNISARQFYQGENLIQAVKST 1096 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L+ +++ELTES ++++ A +++ QLG + LDDFGTGYSSL+ L FP Sbjct: 1097 LERSQLVPSQLELELTESMVMKDAVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFP 1156 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 +D++K+D+ F+ DI S +++ +I+A+A L LQ +AEGVE+ + A + G N Sbjct: 1157 VDSLKIDRSFILDIASDASSAAILNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYI 1216 Query: 637 QGFLFAKPMPAVAFERWY 654 QG+LF++P+P F + Sbjct: 1217 QGYLFSRPLPPEDFVALF 1234 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 14/172 (8%) Query: 87 REWAGNASAWHDTPAVARD---LSHGLSFAEQVVSEAHSAIVILDSR--GNIQRFNRLCE 141 RE + D V +D L L A +V + + + + I ++ Sbjct: 113 RELPHRVARVLDHWRVRQDNTLLEMELCQANLIVDNSPAVLFHWKAEDGWPIVSVSKNIS 172 Query: 142 DYTGLKEHDVI-GQ-SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFL 199 G + +++ G S L + R ++ E I T + + ++ Sbjct: 173 Q-FGYAQEELMSGDFSYATLVHPKDLDRLEEELQAQINRGERIFQTEYRIITKQKEVRWV 231 Query: 200 FRNKFVHSGSGKNEIFLICSGTDITEERRAQ------ERLRILANTDSITGL 245 FV + DI E +R + RL LA +++ L Sbjct: 232 DERTFVERDAAGKVSHYQGFIIDIDERKRTELVMAARMRLLQLATNNTLAQL 283 Score = 51.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 45/158 (28%), Gaps = 9/158 (5%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQ----VVSEAHSAIVILDSRGNIQRFNRLC 140 E A + + T + L +EQ +V A I G + N Sbjct: 404 RDAEAASLLADFAWTTLERKLTEESLQVSEQKYRHIVDHAPFGITRTTRDGKLISANPAM 463 Query: 141 EDYTGLKEH----DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR 196 + + IG+S + + A ++V + L + G Sbjct: 464 ANILKYDSSQELLETIGRSSLQEVIFSNPADREDMVDKVIISNSWCLHN-LSLRCKDGSL 522 Query: 197 LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + S G DITE+ Q+ L+ Sbjct: 523 ATCRVHSRRLSEKGSQNWEYENFLEDITEQLETQQTLQ 560 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 52/153 (33%), Gaps = 8/153 (5%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV----ILDSRGNIQRFNRLCEDY 143 E+ + + L +Q+ A++ + D++ E Sbjct: 541 EYENFLEDITEQLETQQTLQKNKKNIQQLAENT-EAVLYEYNLSDNKWTYMA--PQVERI 597 Query: 144 TGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNK 203 G K D I + + + + R A+ +E G +++ R+ Sbjct: 598 FGYKPEDWIDNQFWLDRVHEADWGKASREELSKLNQQEAHSIEYRFYKKDGSIVWV-RDI 656 Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 +N++ L DIT+ ++++ +L+ L Sbjct: 657 IRIESDAENKLCLHGLLIDITDSKQSESQLKKL 689 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 826 bits (2135), Expect = 0.0, Method: Composition-based stats. Identities = 186/570 (32%), Positives = 307/570 (53%), Gaps = 7/570 (1%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 HD R H L A+ + + A++I I+ N TG + +V+G+ Sbjct: 396 LHDITE-RRKGEHDLRLAQVLFRTTNEALMISSRDNKIEMVNPAFSRITGYQLDEVLGKG 454 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 L R +A + + G A+E E+W G+ + + + + Sbjct: 455 PDLLQSGRHDAPFYTQMWHALQQDG-AWEGEIWNRRKSGETYPEWLSIATVTNDKGETVQ 513 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLD 273 + + +DIT+ ++A+E + AN D +T LPNRN D + + + +V ++++D Sbjct: 514 YVAAFSDITKRKQAEETILHQANYDFLTDLPNRNLFHDRLQTELKRSQRSGQQVALLFID 573 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEA 332 LD FK VND GH GDQLLR+V++ + C+ +AR GGDEF V+ + Sbjct: 574 LDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGDEFTVILPELHGPEGVAR 633 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 +A ++ +L + I E++ S S+GI + PE + ++++AD AMY AKE GRG F Sbjct: 634 LAQGMIDKLEERYCIQDHELFISASIGITIYPEDADNMMDLVKNADVAMYRAKENGRGSF 693 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERG 451 C +T EMN + ++ LR ALE Q IHYQP + G + +EAL+RW++ Sbjct: 694 CFYTAEMNADARQLHKIEQALRVALEEGQFWIHYQPYVQQSSGLITGVEALIRWRNSAGE 753 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIF 510 ++ P FI AEE+GLIVP+G WV+ V+ +A+W+ +G + +VN+SARQ + + Sbjct: 754 IVYPDQFIPVAEETGLIVPIGLWVLRSVIGVIAQWQREGHPDITFSVNVSARQFQEGHLV 813 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 +K LQE + +E+TES +I + E L+++++ LG +V LDDFGTGYSSL Sbjct: 814 GQIKAALQENQINPQSLMLEITESLMIRDPEHTLNMLKEIKALGVRVALDDFGTGYSSLG 873 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L +FPID +K+D+ F+ I +++V AIV++A +L + VI EG+E+ ++ + Sbjct: 874 YLKQFPIDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVGVIGEGIENDQQLQRVNL 933 Query: 631 NGINERQGFLFAKPMPAVAFERWYKRYLKR 660 + + QGF +++PMP +++ Y K Sbjct: 934 HACDYVQGFFYSRPMPYDELALFFEGYQKS 963 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 826 bits (2135), Expect = 0.0, Method: Composition-based stats. Identities = 198/581 (34%), Positives = 310/581 (53%), Gaps = 11/581 (1%) Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCE 141 RK + + G + ++ L A V IVI D+ NI + NR Sbjct: 503 RKGKPQRFTGVMTDITQQ----KNNELQLRQAAIVFESTREGIVITDAERNIIKVNRALI 558 Query: 142 DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 D G E++++GQ + + ++ + + E+W G+ L + Sbjct: 559 DLFGYPENELLGQRPRIFHSGKHDGHFYQQMLQA-LDEHGFWRGEMWNRRQNGELLPMMT 617 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH 261 + S ++ I TDI++ + ++ RL +A D +TGLPNR + +D A+ H Sbjct: 618 SINPVCDSNGEILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQH 677 Query: 262 A--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL 319 A ++ +V ++ LDLD+FK VND++GH FGD+LL VS + L V+ R GGDEF Sbjct: 678 AMLNSTRVALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFT 737 Query: 320 VLASN-TSQSALEAMASRILTRLRLPFRIGL-IEVYTSCSVGIALSPEHGSDSTAIIRHA 377 VL N S + +A RI+ L PF + EV S+GI+L PEHGS + +++ A Sbjct: 738 VLLQNNPSPDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQA 797 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEV 436 DTAMY AK GR + F+ E+ + L L+ L +A+ + + YQP+I+ ++ Sbjct: 798 DTAMYRAKHDGRDGYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQI 857 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRV 495 EAL+RW PE GLIPP +FIS AEE+GLI +G WV+ + RQ W D+ + + + Sbjct: 858 IGAEALLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINL 917 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 AVN+S QL + + +L F +++ELTES L+E E + ++Q Q G Sbjct: 918 AVNLSPLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGI 977 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 ++ +DDFGTGYSSL+ L +FP+D +K+D+ FV DI + + IVA+ +L L V+ Sbjct: 978 RIAIDDFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVL 1037 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 AEGVE+ + FL + G + QG+L++ P+PA F + + Sbjct: 1038 AEGVETKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQ 1078 Score = 54.5 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 16/176 (9%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL-DSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 A++R ++ + I ++ G+ RFN L ++ Sbjct: 77 MQHRQALSRRVAEKDRLLHHFFDLPLLGMAITTNANGSWLRFNDHLSTLFNLSRDELA-- 134 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNA--YEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 + L ++ + R + + G + Y E G LF + + Sbjct: 135 ELNLLALTHPDDRPYDRQEWMRMQDGESQGYRREKRFVRPDGSMLFALVDTRCIRHPDGS 194 Query: 213 EIFLICSGTDITEERRAQERLRILAN-TDSITGLPNRNAMQDLIDHAINHADNNKV 267 +I DI+ + ++ RL N D + L N AI + + V Sbjct: 195 IDCMINVIEDISARKNSELRLIRQNNLYDML-SLTN---------QAIVRSQDRLV 240 Score = 49.1 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 11/136 (8%) Query: 109 GLSFAEQVVSEAHSAIVIL-----DSRGNIQRFNRLCEDYTGLKEHDVI-GQ-SVFKLFM 161 L A +V+ + IL +S ++ + + + G + D I G+ ++ L Sbjct: 400 ALQNAAEVIDASP---TILFRWQPNSSWKMEYVSSNVQRW-GYQADDFINGKLTMSDLLH 455 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 Y +E + T G+ L++ + T Sbjct: 456 PEDLQRVWAEVIHHIETRHKEYILECRVRTAAGEYLWVENHVTTSFDRKGKPQRFTGVMT 515 Query: 222 DITEERRAQERLRILA 237 DIT+++ + +LR A Sbjct: 516 DITQQKNNELQLRQAA 531 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 826 bits (2134), Expect = 0.0, Method: Composition-based stats. Identities = 202/567 (35%), Positives = 328/567 (57%), Gaps = 7/567 (1%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 V L +V ++ D GN+ + G E ++G+ Sbjct: 387 DISRRKQVENSLKESEERYRMLVENQADLVIKTDMTGNLLFVSPSFCKLFGQTEEKLLGK 446 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 ++ + M + A + ++ + Y E PT +G+R + + + + SG+ E Sbjct: 447 ALLPVIMLPEQLATAAGMEQMICSDTSYYR-EYLSPTREGKRWIGWALRCIFNQSGQAEA 505 Query: 215 FLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYL 272 +I G DIT+ + A+ + LA D +TGLPNR + D + AIN A+ V +++L Sbjct: 506 -IIGMGRDITDRKTAESTIEQLAYHDPVTGLPNRTLLHDRLQLAINRAERDSQGVAILFL 564 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALE 331 DLD FK +ND+ GH GDQLLR V +L C+ +AR GGDEF+VL S A+ Sbjct: 565 DLDRFKAINDSLGHAMGDQLLRLVGNRLLDCVRSSDTVARLGGDEFVVLISALDNDHAVG 624 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 ++ +IL +L P++I EVYTS S+GI+L P G D+ ++++AD AMY AKE GR Sbjct: 625 SVVMKILEQLCEPYQIDDHEVYTSSSIGISLFPRDGRDAEELLKNADMAMYQAKEAGRNT 684 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPER 450 F+PE+N R E L L++ +R+ALE ++ + YQP++ R G + +EAL+RW+ P+ Sbjct: 685 CHFFSPELNMRATERLLLESTMRRALEREEFFLVYQPQMELRSGHIAGIEALLRWRHPDL 744 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTI 509 G++PP +FI AEE+GLIVPLG WV+ + RQ +W+ +G LR+AVN+SARQ + + Sbjct: 745 GVVPPNNFIPIAEETGLIVPLGEWVLAEACRQAVRWQQEGQPPLRMAVNVSARQFRQRNL 804 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 ++++L E + +++ELTES ++EN E A+ ++Q ++G + +DDFGTGYSSL Sbjct: 805 GLRIEKILMETGLDPALLELELTESAVMENPEEAILTLRQLKKMGITLSIDDFGTGYSSL 864 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L FPID +K+D+ FV+ + + ++ AI+A+A ++ L V+AEG+E +++ F+ Sbjct: 865 SHLKHFPIDRLKIDRSFVKHVTRDHNDATIAEAIIALAHSMKLTVVAEGIEHSEQMEFMH 924 Query: 630 KNGINERQGFLFAKPMPAVAFERWYKR 656 + + QG+ ++P+ A F + KR Sbjct: 925 QRHCDTMQGYYLSRPVTAEEFGTFLKR 951 Score = 69.1 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 53/147 (36%), Gaps = 8/147 (5%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG-NIQRFNRLCEDYTGLK 147 +A A++ + R L + + +V H+ I+++D I N L G Sbjct: 260 FAVRAASELERRQAERVLKETEARLKTIVDSVHTGILVIDPENHRIVDVNELAASSLGRT 319 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 ++IG S + E + + + E + G RL + + Sbjct: 320 REEMIGTSCHRFICPNEEGRCPITDLQQELDNE-----ERDLIRADGSRLPVIKTVSRVV 374 Query: 208 GSGKNEIFLICSGTDITEERRAQERLR 234 G+ L+ S DI+ ++ + L+ Sbjct: 375 LDGRE--HLLESFVDISRRKQVENSLK 399 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 825 bits (2133), Expect = 0.0, Method: Composition-based stats. Identities = 194/635 (30%), Positives = 296/635 (46%), Gaps = 20/635 (3%) Query: 40 PDRTLQLSAEQAARIREMTVITSSLMMSLTV-------DESDLSVHLVGRKINKREW-AG 91 D + E R++ + T+ + D S + GR + R+ A Sbjct: 374 SDSFADVHPEDRERVKRVFRQTTETGRGQEIEYRLVRNDGSVRHMASAGRVLGDRQGEAA 433 Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 + A + + I D+ I R N+ D TG + Sbjct: 434 RVVVVSRDVTERKQAEQWERIAATAFE-SQQGMFITDANAVILRVNQAFTDITGYAADEC 492 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 IGQ+ KL S R A+ R ++ E+W G + Sbjct: 493 IGQTP-KLLSSGRHDASFYAAMRESIERNGVWQGEIWNRRKNGDVFPEWLTISSVRDGDG 551 Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGV 269 + + TD++ + AQE +R LA D++TGLPNR + D + AI + + + Sbjct: 552 VVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLPNRRLLHDRLRVAIASSVRSERQGAL 611 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA 329 +++DLDNFK +ND GH GD+LL+ V + S + +AR GGDEF+V+ N + Sbjct: 612 LFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLGGDEFVVMLENLGERP 671 Query: 330 LEA------MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 EA + +I+ L P+ + + + + SVGI L +++ AD AMY Sbjct: 672 EEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSVGITLFGGQQVGIDELMKRADLAMYE 731 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALV 443 AK GR F P M V ++ +LR A+ + YQP++ G+V EAL+ Sbjct: 732 AKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLAYQPQVDASGQVIGAEALL 791 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG--INLRVAVNISA 501 RWQ +RG + P +FI AEE+GLI+PLG WV+ Q A W + V+VN+SA Sbjct: 792 RWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAARPGRERFTVSVNVSA 851 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 RQ + VL + +ELTES L++N + ++ + G LDD Sbjct: 852 RQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAKMSALKARGVGFSLDD 911 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSLS L + P+D +K+DQ FVRD+ P + + R I+A+A+ L L VIAEGVES Sbjct: 912 FGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIALARTLGLSVIAEGVES 971 Query: 622 AKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 ++ L G QG+LF++P+ FE + +R Sbjct: 972 VEQQDALAAQGCLAYQGYLFSRPLALADFEAFLRR 1006 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 186/571 (32%), Positives = 303/571 (53%), Gaps = 6/571 (1%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 +++ + V + AI+I D + I N TG + Sbjct: 435 RVIGTSQEVTAQQEMLAQMQLLASAVQYSGEAILITDVKNKILTVNPAFTRLTGYTSEEA 494 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 +G+ L R R G ++ E+W G + + V G Sbjct: 495 VGRDPSFLSAGRTMPEEYERMWNGIAERG-FWQGEIWDRRKDGGIYPKWMSISVIRGEDG 553 Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGV 269 + + TD++ ER A+ERL +A+ D +TGL NR +++ +D A+ A ++V V Sbjct: 554 MIRYHVAHFTDVSSERAAEERLHHMAHHDVLTGLLNRLSLKGRLDQALAAARRDGSRVAV 613 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-S 328 +++DLD FK +ND GH GD+LL +V+ + + V+AR GGDEF+++ S S Sbjct: 614 LFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDVVARVGGDEFVIMLSGVEHTS 673 Query: 329 ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 A+ +A +++ + ++IG ++Y++ S+GIA+ P G D ++++AD AMY AK G Sbjct: 674 AVAMVAEKLVFSVGQSYQIGGYDLYSTPSIGIAIYPTDGEDGDILMKNADAAMYHAKMAG 733 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQS 447 R F F +MN+ E L + LR+AL N + ++YQP I V SLEAL+RW Sbjct: 734 RNNFQFFDAKMNEAALERLNTEHALRRALANQEFCLYYQPVIDLASNRVASLEALIRWNH 793 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLAD 506 PE+GL+ P FI AEE+GLI PLG WV+ RQ+A + GI+ +++ VNISA Q+ + Sbjct: 794 PEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLADFAAAGISGIKMGVNISAIQMRN 853 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 + + V++ + + + E+TES +E + ++ + +G V +DDFGTGY Sbjct: 854 GNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETVRILDLLNAMGVSVAIDDFGTGY 913 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSLS L FPI+ +KLD+ FV I ++ + A + +A +L L+V+AEGVE+ + Sbjct: 914 SSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATIGLAHSLELKVVAEGVETQAQLD 973 Query: 627 FLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 +L G + QGFLF++P+PA + ++Y Sbjct: 974 YLRSRGCDMVQGFLFSRPVPADEVLAFIRQY 1004 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 824 bits (2131), Expect = 0.0, Method: Composition-based stats. Identities = 188/563 (33%), Positives = 309/563 (54%), Gaps = 9/563 (1%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 + R + A++V S + I+ D + I N + TG + ++IGQ+VF L Sbjct: 263 SERRASAEREQLAQKVYSHTPAGIIFTDDQHRILSINPATTEMTGYEPFELIGQTVFGLI 322 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFL-FRNKFVHSGSGKNEIFLICS 219 + S+++ + ++ EL + G R V + Sbjct: 323 SL--DEGISQKDFQEQISMRGSWSSELEVTQKNGSNFPAGARINRVDDPQSGLPAHYVWI 380 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNF 277 DITE ++A++R+R +A D++TGLPNR A+ + + A + V V+++DLD F Sbjct: 381 LADITERKQAEDRMRHIAQHDALTGLPNRLALLMRLAQLLPEARRHGWTVAVMFIDLDRF 440 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS-R 336 K +ND GH GD++LR+V+ + + L +AR GGDEF+++ + S A A+ S + Sbjct: 441 KIINDTLGHQVGDEMLREVACRLSNLLRETDFVARLGGDEFVIILPSISSPADAAIVSGK 500 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 I++ L E++TS S+GI++ P+ G D ++++ADTAMY AK GR + F Sbjct: 501 IISALSTAIEAEGHELHTSPSIGISIFPDDGPDGDIVLKNADTAMYHAKAAGRNNYQFFA 560 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPP 455 +MN+ E L ++ LR A+ ++L + +QP+ +EAL+RW P G+I P Sbjct: 561 ADMNRTAAERLNIERKLRHAIARNELSLVFQPQFRAEDTTPTGVEALLRWHHPTDGMISP 620 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALK 514 FI AEE+G+IV +G WV+ ++A+W + G+ LR+AVN+SARQL + + Sbjct: 621 ARFIPVAEETGMIVEIGDWVLATACHEMARWINAGLKPLRIAVNVSARQLRRRDFCETVA 680 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 L +++E+TES ++EN + A+ ++++ ++G + +DDFGTGYSSL+ L Sbjct: 681 NALTTSGLPAELLELEITESSVMENPQEAIHILERLGRMGVTLAIDDFGTGYSSLAYLKL 740 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 FPID +K+D+ FV DI +++ +A+A +L L VIAEGVE+ + L NG + Sbjct: 741 FPIDHLKIDRSFVADIEHDLNDRAIAFGTIALAHSLGLNVIAEGVETEDQHELLRANGCD 800 Query: 635 ERQGFLFAKPMP-AVAFERWYKR 656 E QGFLF+KP+ A AF + R Sbjct: 801 EVQGFLFSKPLTGAAAFAFLHAR 823 Score = 49.1 bits (117), Expect = 6e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 55/180 (30%), Gaps = 31/180 (17%) Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 L +D+ + I R+ A A L + + V+ SA+ + Sbjct: 118 PLFIDQQLVGFITTYTDITDRKAAETA------------LRTQHNQLQTVIESIPSAVSL 165 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR--REAAASRRNNRVFFRSGNAYE 184 DS GN+ FN DV +L E R + G+ + Sbjct: 166 FDSAGNLVLFNTAFPRLL-----DV----PAELAKPGVSMETLFRFNAMRGEYGPGDPEK 216 Query: 185 V--ELWIPTCKGQRLFLFRNKF-----VHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + L + R + G E + TDI+E R + ER LA Sbjct: 217 IVATLMERAKNPSHHYFERTRPNGKTLEVRGVPLAEGGFVTVYTDISERRASAER-EQLA 275 Score = 46.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 14/141 (9%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT---------GLKEHDVIGQS 155 D+ L++ + VVS I + D + ++ +N+ + G+ +++ Sbjct: 13 DIGRQLAYLQAVVSNMPQGISVFDEQLRLRVWNQGFINVLNLPPEIVYEGVHFSELVRVP 72 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 + E A A+ E G + + + Sbjct: 73 AQRGEYGPGEPEAHVERITALANKFEAHSFE--RTRPNGNTHLVQGEPLFID---QQLVG 127 Query: 216 LICSGTDITEERRAQERLRIL 236 I + TDIT+ + A+ LR Sbjct: 128 FITTYTDITDRKAAETALRTQ 148 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 216/651 (33%), Positives = 325/651 (49%), Gaps = 15/651 (2%) Query: 20 YWRLTESSDVLRFSTTETTEPDRTLQLSAEQAAR-----IREMTVITSSLMMSLTVDESD 74 Y + L E ++ AA + E S+ + +D D Sbjct: 328 YCSVHSQRAELLMGPAEQLIGRNVTEVLPTLAALSVLDVLHEAQAQGWSVGRQIMLDLPD 387 Query: 75 LS---VHLVGRKINKREWAGNASAWHDTPAVARDLS-HGLSFAEQVVSEAHSAIVILDSR 130 L L + + A R S L QV ++ AIVI D+ Sbjct: 388 LGPTWFELSAARKPQAAGAKPRIILLSRDITERKRSQEQLQLTAQVFDQSSEAIVIADAS 447 Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIP 190 I R NR TG +E + +GQSV L M+ + +E E W Sbjct: 448 HRIVRINRAFSRITGYQESEAVGQSVRLLTMAEAGPDCNADAVYARLARQERWEGESWGR 507 Query: 191 TCKGQRLFLFRNKFVHSG--SGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 G + + + I DI+ +R AQER++ LA+ D +T LPNR Sbjct: 508 RKDGSGYPQWLSVSSVRDGDANGPITHSITLFRDISLQREAQERIQRLAHFDPLTDLPNR 567 Query: 249 NAMQDLIDHAINH--ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 + + I A ++ +++LDLD+FK VND+ GH GD LL V+ + S + Sbjct: 568 VLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQSLIGP 627 Query: 307 DQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEH 366 ++R GGDEFL+L TS + +AS +LT + PF+I E+ T+ SVGIA+ P Sbjct: 628 QDTVSRLGGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAMCPAD 687 Query: 367 GSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHY 426 G + + AD AMY+AK+ GR ++ FT ++ R L ++ LR+ALE Q +HY Sbjct: 688 GESFDTLYQRADAAMYSAKQSGRNRYGFFTADLQARTARALQIENALRRALERQQFELHY 747 Query: 427 QPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAK 485 QP+++ G+V EAL+RW PE G++ P +FI AE SG IV LG WV+ R + Sbjct: 748 QPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAARDAKR 807 Query: 486 WRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELAL 544 W D + LR V+VN+SA Q + + + LQ+ +++ELTE +++ AL Sbjct: 808 WLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDPVAAL 867 Query: 545 SVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIV 604 +++ Q G ++ +DDFGTGYSSLS L RF I +K+DQ FVRD+ +++V AI+ Sbjct: 868 AMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIVSAII 927 Query: 605 AVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +AQAL +Q AEGVE+ + FL G +E QG+LF++P+PA AFE + + Sbjct: 928 RMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADAFEAYLR 978 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 188/569 (33%), Positives = 289/569 (50%), Gaps = 7/569 (1%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 G + + L A V + AI++ D+ I N E TG + Sbjct: 357 GRCFVFSTDLTEQKRAEESLRLAAMVYENSSEAILVTDADNLIIAVNPAFEQMTGYAAAE 416 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 V+G++ ++F S R A + + + + E+W G+ V Sbjct: 417 VLGKNP-RIFKSGRHDRAFYHSMWLALDTEGYWHGEVWDKRKNGEEYIKLLTINVIRDDD 475 Query: 211 KNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVG 268 + TDITE ++ +E + AN DS+T LPNR D ++ A + Sbjct: 476 GAIYRHVALFTDITERKKVEELIWRQANYDSLTKLPNRQMFHDRLEQEAKKAHRAGLSMA 535 Query: 269 VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS 328 ++ +DLD FK+VND GH GD LL + + I +C+ +AR GGDEF+V+ S Sbjct: 536 LLLIDLDRFKEVNDTLGHDKGDILLIEAARRISACVRESDTVARLGGDEFIVILSELEDM 595 Query: 329 A-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEG 387 A ++ +A IL L PF++ Y S S+GI+L P ++ + +HAD AMY AK Sbjct: 596 ASIDRVAQDILGSLAEPFKLDAEPAYISASIGISLYPNDATELDVLFKHADQAMYVAKYA 655 Query: 388 GRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQ 446 GR +F FT +M + + L +LR A+ Q ++YQP + G++ EAL+RWQ Sbjct: 656 GRNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQFRVYYQPIVEMSSGQIYKAEALIRWQ 715 Query: 447 SPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLA 505 P RG++ P +FI AEE+GLIVP+G WV V+QV +WR K + +++VN S Q Sbjct: 716 HPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAVQQVVQWRRKFHRSFQISVNKSPVQFR 775 Query: 506 DQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTG 565 + + L++ + I VE+TE L++ + + +F G QV +DDFGTG Sbjct: 776 HAESLS-WPEYLEQQHVSGDSIIVEITEGLLLDAEVEVNKKLLRFRDAGIQVAIDDFGTG 834 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YSSLS L F ID +K+DQ FVR++ +L AI+ +A L +VIAEGVE++ + Sbjct: 835 YSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLALCEAIIVMAHKLGFKVIAEGVETSTQH 894 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFERWY 654 L G + QG+L+++P+P FER Sbjct: 895 ELLAAAGCDYGQGYLYSRPLPPEEFERQL 923 Score = 94.6 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 3/130 (2%) Query: 104 RDLSHGLSFAEQVVSEAHSAIV-ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + + L Q+V A IV I S IQ NR E G ++IG+ + + Sbjct: 123 KKAAAALRLQSQIVENAVEGIVLIKASDSTIQYTNRQFETLFGYAPGELIGKHISIINAP 182 Query: 163 RREAA-ASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 ++ + + + E++ G + F N +++ I Sbjct: 183 GNKSQMETAQEINRQLEKEGVWSGEVFNRRKDGTTINTFLNASSFQHPELGDLW-IGYQR 241 Query: 222 DITEERRAQE 231 DIT+ + + Sbjct: 242 DITKRKLTEA 251 Score = 92.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 85/246 (34%), Gaps = 28/246 (11%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRF-STTETTEPDRTLQ--------LSAEQAAR 53 T++ + + L + P + + ++ E + + S E R Sbjct: 152 TIQYTNRQFETLFGYAPGELIGKHISIINAPGNKSQMETAQEINRQLEKEGVWSGEVFNR 211 Query: 54 IREMTVITSSLMMSLTVDESDLSVHLVG--RKINKREWAGNASAWHDTPAVARDLSHGLS 111 ++ T I ++ + + + +L +G R I KR+ S Sbjct: 212 RKDGTTI-NTFLNASSFQHPELGDLWIGYQRDITKRKLTEAVML------------EKES 258 Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 + A ++D +G + N +G ++IG S+ +L + + R Sbjct: 259 QYRAAIDTAADGFWLVDMQGRLLEVNDAYARLSGYSREELIGMSIPEL-DAIDNSELVRA 317 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 R+G E + G + + S SG TD+TE++RA+E Sbjct: 318 RIEEIIRNGGYLEFDTMHKRKDGSLWPVHISTTYSSVSGGRC---FVFSTDLTEQKRAEE 374 Query: 232 RLRILA 237 LR+ A Sbjct: 375 SLRLAA 380 Score = 66.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 4/123 (3%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 +V +A I D+ G I N CE+ G+ DV+G + F + R +R Sbjct: 12 IVDSIPAATFIKDAGGRIVYMNHACEEQWGITF-DVLGGTDGSQFFPPEQIERFREKDRE 70 Query: 176 FFRSGNAYEVE--LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 G E E W K R+ F GK +FL+C D+TE+++A L Sbjct: 71 VIAGGKQIEYEAPFWNAKLKENRIGFFIKNPTFDAEGK-LLFLVCITFDVTEDKKAAAAL 129 Query: 234 RIL 236 R+ Sbjct: 130 RLQ 132 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 824 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 188/563 (33%), Positives = 310/563 (55%), Gaps = 8/563 (1%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + + + L + QV++ + A+V+ I+ N TG E + + + L Sbjct: 949 RKLIENELVLSSQVLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQITDKYLVHLAY- 1007 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 +++ + R + E+WI + + + ++ + TD Sbjct: 1008 KQQRELFNSIEQQLLRH-KHWVGEIWIRNKQRKAILVWLEINQVIDIKGETSHFVAVFTD 1066 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKV 280 ITE ++A++ LR LA+ D++TGLPNR QD ++HAI A N V +++LDLD FK + Sbjct: 1067 ITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLFLDLDRFKHI 1126 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILT 339 ND+ GH GD LL+ + + + + +AR GGDEF ++ +++ ++ ++L Sbjct: 1127 NDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLR 1186 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 + PF + + S S+GI+L P ++ ++I+ ADTAMY AK GR F +T ++ Sbjct: 1187 AFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSLGRNNFQFYTHKL 1246 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDF 458 N+ ++ L+ L++A+ ++L + YQPK + R G + LEAL+RW E G I P++F Sbjct: 1247 NEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALLRWHHTELGPISPVEF 1306 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVL 517 I AEE+G+I +G WVI +Q+A+W G N + +AVN+SARQL I + ++ L Sbjct: 1307 IPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSARQLK-ADIISTIEVAL 1365 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 +++ELTES ++ N + ++S++ + LG + +DDFGTGYSSLS L RFPI Sbjct: 1366 AVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGTGYSSLSYLKRFPI 1425 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D +K+D+ FVRDI P ++ AI+A+A +L L V+AEGVE+ + FL G +E Q Sbjct: 1426 DTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQLNFLGLQGCDEVQ 1485 Query: 638 GFLFAKPMPAVAFERWYKRYLKR 660 GFL +KP+ A K+ Sbjct: 1486 GFLLSKPLSAKDCLTLLGNQSKQ 1508 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 824 bits (2129), Expect = 0.0, Method: Composition-based stats. Identities = 202/573 (35%), Positives = 305/573 (53%), Gaps = 12/573 (2%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 A R+ L A + +++ D+ G I R N TG DVIG++ Sbjct: 338 KMTAEVRESEAELRIAAVAFD-SLEGMMVTDADGTILRVNSAFTKCTGYTADDVIGRNPR 396 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L R +AA R R G ++ E+W G+ + N + Sbjct: 397 LLSSGRHDAAFFRDMWETIHRVGG-WQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHYV 455 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKV--GVVYLDLD 275 + DITE + A+E+++ LA D++T LPNR ++D + I + N ++++DLD Sbjct: 456 GTHYDITERKLAEEQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVDLD 515 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM-- 333 NFK +ND GH GD LL V++ +L + +AR GGDEF+++ S+ S++ EA Sbjct: 516 NFKTLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAASE 575 Query: 334 ----ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 A ++LT L P+ + E T+ S+G L H + +++ +D AMY +KE GR Sbjct: 576 TEGAAEKVLTALSRPYYLAGTEFRTTASIGATLFTGHETSIDELLKQSDLAMYKSKESGR 635 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPE 449 C F P M V E L+ LR+A++ DQL++HYQ ++ V EALVRWQ P+ Sbjct: 636 NAICFFDPAMQTVVMERAALEAALRRAIDEDQLLVHYQAQVLNGNRVTGAEALVRWQHPQ 695 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQ 507 GL+PP +FI AEE+GLI+ LG V+ RQ+A+W R +L +AVN+SA+QL + Sbjct: 696 HGLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSAQQLREN 755 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 + T++ + L + + +ELTES L++N E + + G LDDFG GYS Sbjct: 756 SFVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDDFGVGYS 815 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SLS L R P+ +K+D+ FVRD+ P + RAIVA+AQ+L L VIAEGVE+ + F Sbjct: 816 SLSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVETQAQRQF 875 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 L G + QG+LF +P+P FE + + R Sbjct: 876 LADAGCHAYQGYLFCRPLPIEDFEAFADTFDSR 908 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 823 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 201/562 (35%), Positives = 299/562 (53%), Gaps = 11/562 (1%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDS---RGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 + L E+ + + +A++I + I+ N E TG + IG+S L Sbjct: 340 RQAAEAALRLRERAIECSANAVIISSAQVPEFAIEYVNPAFERITGYTAAEAIGRSSSFL 399 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 + E A R + L G + + + Sbjct: 400 LRNDHEQAGLYE-IRAALAEKREGKAVLRNYRKNGSLFWNDLYIAPVKDDEGKTTHFVAA 458 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGV--VYLDLDNF 277 +DIT ++ + L LA+ D +TGLPNR +QD +++AI ++ N V V +DLD F Sbjct: 459 MSDITPMKQYETTLHRLASHDVLTGLPNRALLQDRLENAIAYSARNGHAVWVVLVDLDRF 518 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL---EAMA 334 K VND GH GD LL+ +S + + + +AR GGDEF+++ + Sbjct: 519 KFVNDTMGHQAGDVLLKIISDRLQASVRESDTVARLGGDEFVLVLPECGDGPSGYSSDVI 578 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 RI+ + P I E + SCS+GIA+ P G+D T ++ HAD AMY +KE GR F Sbjct: 579 QRIMEAVVKPLTIQGSEFFLSCSMGIAVYPNDGADPTTLLAHADVAMYRSKELGRNNFQF 638 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 +TP MN + E L ++ LR A+E ++LV+HYQP++ G + LEALVRW P G++ Sbjct: 639 YTPAMNDQALERLRIEGELRHAIELNELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMV 698 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTA 512 P FIS AEE+GLI+P+G WV+ RQ W+D G LR+AVN+SARQ ++ + Sbjct: 699 QPGSFISLAEETGLIIPIGAWVLQTACRQAKAWQDMGFTQLRIAVNLSARQFTQASLLES 758 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 +K LQE E +++ELTES ++ + E + ++ LG Q+ +DDFGTG+SSL+ L Sbjct: 759 IKDTLQETGLEARFLEIELTESSVMADIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYL 818 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 RFPID +K+D+ FVRDI S+V +I+++A L L VIAEGVE+A + L G Sbjct: 819 KRFPIDTLKIDRSFVRDIAINQDDASIVSSIISLAHNLKLNVIAEGVETASQMDILRAQG 878 Query: 633 INERQGFLFAKPMPAVAFERWY 654 NE QG+ F KP+P+ E Sbjct: 879 CNEIQGYYFCKPLPSDQIETLL 900 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 197/637 (30%), Positives = 326/637 (51%), Gaps = 19/637 (2%) Query: 34 TTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNA 93 E + +R + A + R R IT L ++++ + ++ E Sbjct: 440 PGEELQGERIETVLAHEE-RQRLRQQITQRLSENISIMHFSARLVRKDGQLLDVEIHSRL 498 Query: 94 SAWHDTPAV---------ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + A+ A +V A I+I + I N+ T Sbjct: 499 FEYRGRSAIIGVVVDISDRVQADANQKLASKVFENAAEGILITGADYRIIAVNQAFTRIT 558 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G VIG+ V ++F R+ + ++ E+ + + Sbjct: 559 GYPPELVIGR-VSRIF---RDNTSWSVAMLDGLARHGHWQGEMLDRRRSHEWYPAELSIS 614 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH--A 262 + DIT ++A+ERL+ LAN D +T LPNR+ + ++ I + Sbjct: 615 AVRDDAGAITNYVGVFADITVRKQAEERLQFLANHDPLTRLPNRSWLIACLEDRIQQIAS 674 Query: 263 DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 +V V++LDLD FK +ND++GH GD+LLR+ + + + +AR GGDEF +L Sbjct: 675 SGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQVVGGRGQIARLGGDEFTLLV 734 Query: 323 SN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 S+ SQ+ L +A IL L P + E+ + S+GI++ P GSD+ ++++AD AM Sbjct: 735 SHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISVYPHDGSDARTLLKNADVAM 794 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLE 440 Y AKE G+ + F EMN + E L L+ LR+ALE + +H+QP + + +LE Sbjct: 795 YRAKEAGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEFELHFQPIVAAATYRLEALE 854 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNI 499 L+RW+ PE GL+ P+ FI AEE+GLI P+G WVI RQ+A+W G+++ R+A+N+ Sbjct: 855 VLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACRQLAEWDCLGLHVPRLAINL 914 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 SARQ Q + + L E +++E+TES +++N A+S++ + LG ++ + Sbjct: 915 SARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNPSEAVSLLGELKALGVRLSI 974 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSLS L RFP+D +K+D+ F+ + + ++ AI+A+A+ L+ V+AEGV Sbjct: 975 DDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIAEAILAMARKLSFSVVAEGV 1034 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 E+ + AFL G QG+LF++P+PA + ++ Sbjct: 1035 ETEAQAAFLCAKGCQLLQGYLFSRPLPAAELPAFLQQ 1071 Score = 66.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 7/139 (5%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 R L L+ E + + + + + D G NR G ++IG+ Sbjct: 273 RQLQDSLARFEAWLRNSPNVMSLKDLEGRYLLVNRAYSRALGKAPAELIGKKSADFLPPE 332 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 EA A+ +R + + + E + T G KF + + C TDI Sbjct: 333 -EARATAEQDRQVLSALESRQYEQTL-TLDGLPGDFLVTKFPLFDADGLPAGIGCIATDI 390 Query: 224 TEERR-----AQERLRILA 237 T+ +R + R A Sbjct: 391 TQNKRERQAKQEAENRYHA 409 Score = 56.8 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 25/216 (11%), Positives = 61/216 (28%), Gaps = 7/216 (3%) Query: 16 SHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDL 75 P + + S ++ Q+ + +R E T+ L V Sbjct: 314 GKAPAELIGKKSADFLPPEEARATAEQDRQVLSALESRQYEQTLTLDGLPGDFLV----T 369 Query: 76 SVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQR 135 L A+ + + ++ ++ I IL + Sbjct: 370 KFPLFDADGLPAGIGCIATDITQNKRERQAKQEAENRYHALIEQSLVGIYIL-QDECLAY 428 Query: 136 FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQ 195 N + G ++ G+ + + ++ + + + + GQ Sbjct: 429 VNDKLAEMLGYPGEELQGERIETVLAHEERQRLRQQITQRLSENISIMHFSARLVRKDGQ 488 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 L + + + G++ I I DI++ +A Sbjct: 489 LLDVEIHSRLFEYRGRSAI--IGVVVDISDRVQADA 522 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 201/623 (32%), Positives = 316/623 (50%), Gaps = 13/623 (2%) Query: 49 EQAARIREMTVITSSLMMSLTVDESD----LSVHLVGRKINKREWAGNASAWHDTPAVAR 104 E R+R+ + ++ L+ D S+ +HL + + N + R Sbjct: 73 EVLRRMRDDPHTSDIPVILLSADASEQSEIAGLHLGANDYLVKPVSTNVLIVRVRNLIQR 132 Query: 105 DLSH-GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 + L A V + AI+I D I N TG + +V+ ++ K S Sbjct: 133 NADRIQLRLAAHVFEYSGEAIMITDRDNQIVDVNAAFTTLTGYHKSEVLSKNP-KFLSSG 191 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 R + R+G ++ E W G V + F + + D+ Sbjct: 192 RTTRKEYQAMWAAIRTGGFWQGEFWDRRKDGSVFPKMMTVSVVLDRAGDIDFYLANFVDV 251 Query: 224 TEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVN 281 + + + R+ LA+ D++TGLPNR +Q ++ +I A ++ VV+LDLD FK +N Sbjct: 252 SHYKETERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIAKRMSEQLAVVFLDLDRFKTIN 311 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE-AMASRILTR 340 D GH GD LL V+ + + + ++AR GGDEF+++ ++ A+A +I Sbjct: 312 DTLGHPVGDDLLIQVADRLKTSVRQYDMVARLGGDEFVMILRGHDMPSVASAVAEKIRLH 371 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 L PF+IG + T+ S+GIAL P +G +++HADTAMY K G FC F+ +MN Sbjct: 372 LNQPFQIGQHTLRTATSIGIALYPGNGERMDDLMKHADTAMYFTKSEGGNGFCFFSSDMN 431 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFI 459 E L L+ L ALEN Q ++YQP+++ +V E L+RW PE+G I P FI Sbjct: 432 LHAHEKLELENLLHGALENQQFELYYQPQLSLPEQQVIGAEVLLRWHHPEKGFISPAVFI 491 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQ 518 AE + I +G WV+ + RQ ++W G+ L R+ VN+S RQ D+ +FT +K+VL Sbjct: 492 PLAEATNQIGAIGEWVLENACRQASQWLRDGLPLPRIGVNVSGRQFQDKNLFTLVKRVLA 551 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 E +++E+TE+ + + + A ++Q + G V LDDFG GYSSL QL PID Sbjct: 552 ETGLPADRLELEITETAVTASPDEAARLLQSLRECGIMVALDDFGQGYSSLGQLRDLPID 611 Query: 579 AIKLDQVFVRDIHKQPV--SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 +K+D FVRDI +P ++ A + + L VIAEGVE+ + +FL +G +E Sbjct: 612 RLKIDAAFVRDITDEPGHPGGAIAAATIGLGHNLGFSVIAEGVETQAQLSFLMAHGCDEV 671 Query: 637 QGFLFAKPMPAVAFERWYKRYLK 659 QG+ FAKPMP FE + + ++ Sbjct: 672 QGYYFAKPMPREQFEAFLRARME 694 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 208/562 (37%), Positives = 312/562 (55%), Gaps = 10/562 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVI--LD--SRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + L+ L + + E+ +AIVI D + I N TG +V+G++ Sbjct: 517 EQQQLAATLELRNRAIEESTNAIVISHADRAADNPIIYVNPAFTVTTGYGADEVLGRNAR 576 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L + + A R R R G V L GQ L+ + + I Sbjct: 577 FLIDNDWDQPAVER-LREAVREGGDARVTLRTYHKDGQLLWNEISLASIRDAQGEVSHFI 635 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLD 275 D+TE R + L A D++TGL NRN + D + AI A D + V V+ LDLD Sbjct: 636 AIFNDVTERVRYEAELEQQATHDALTGLANRNLLNDRMQRAIIRAARDGHAVAVMLLDLD 695 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS 335 FK +ND+ GH GD LL++ + + + + +AR GGDEF+V+ S+ S A + Sbjct: 696 RFKLINDSLGHAAGDALLQETARRLSASVRRGDTVARLGGDEFMVVMSDMSAEDAAAALA 755 Query: 336 -RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 ++L L P + E+ + S+G++L P G + +++HAD AMY AKE GR +F Sbjct: 756 AKVLESLAEPMLLNGREIVATGSIGVSLYPRDGEAAATLLKHADVAMYRAKELGRNRFQF 815 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLI 453 + PEMN+R+ E L L+ +LR+ALEND+L +HYQPK++ R G V EAL+RW+ P+ G++ Sbjct: 816 YAPEMNERILERLELENSLRRALENDELELHYQPKVSLRDGRVIGAEALIRWRHPQLGMV 875 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTA 512 P DFI AEE+GLIVP+G WV+ RQ+ W D G+ + VAVN+SARQ + + Sbjct: 876 SPADFIPLAEETGLIVPIGEWVVDHACRQLRAWLDAGLPQISVAVNVSARQFQHEQLTHV 935 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 L + L + VE+TES ++ E + +++ +G ++ LDDFGTGY SL+ L Sbjct: 936 LARALAAHRLPPGQLHVEVTESAVMCEPERTIFTLRELKNIGVRISLDDFGTGYCSLNYL 995 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 RFPID+IK+D+ FV D+ ++ IV++A +LN VIAEGVE+ + FL ++G Sbjct: 996 KRFPIDSIKIDRCFVTDLATSAEDAAIALMIVSLAHSLNQTVIAEGVENEAQLDFLRRHG 1055 Query: 633 INERQGFLFAKPMPAVAFERWY 654 +E QGFLF++P+PA F R Sbjct: 1056 CDEMQGFLFSRPLPAAEFARLL 1077 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 821 bits (2123), Expect = 0.0, Method: Composition-based stats. Identities = 197/655 (30%), Positives = 326/655 (49%), Gaps = 23/655 (3%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDES 73 + + L + + E +P TL+ E IRE I L S Sbjct: 225 MHGYQVEELLGQDVSMFV--PPEHRKP-LTLERIKEWKGLIRESVNIRKDGTTFLVWLMS 281 Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 ++ + G + + R V+ A +V+ D+ G + Sbjct: 282 EIVKNAKGEPFAIVTSCEDITERKQAEEALRKSEERYRI---VLESAPDPVVVYDTEGKV 338 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV-ELWIPTC 192 FN G + IG+++ L E + G E + T Sbjct: 339 AYFNPAFSRVFGWTLDESIGRNIDFL---PVENVPENKLIFEKINCGKTLSGIETYCLTK 395 Query: 193 KGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQ 252 G+++ + + + I + DITE ++ +E ++ LA D +TGL NR + Sbjct: 396 DGKKVGVNISGAGFFDNHDKLQGSIITLQDITERKKTEEEIKFLAYHDVLTGLLNRKSFY 455 Query: 253 DLIDHAINHA----------DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 ++ + + +K + +LD+D FK VND GH GD+LL+ V++ + + Sbjct: 456 TRLEDELIRSYSYDGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGDELLKVVAVRLKN 515 Query: 303 CLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 CL + R GGDEF ++ ++ + + +A +I + P RI E+Y + S+GI+ Sbjct: 516 CLRKSDYIFRLGGDEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKDHELYITVSIGIS 575 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 + P+ G D ++++AD AMY AKE +G + F EMN++ E + L+ NLR AL++DQ Sbjct: 576 IYPDDGDDVETLVKNADIAMYAAKEENQG-YRFFIEEMNRKTLERMMLENNLRNALQHDQ 634 Query: 422 LVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 L+I+YQP + ++ +EAL+RW PE GLI P FI AEE+GLIVP+G+WV+ + Sbjct: 635 LIIYYQPLVDSTNQIVGMEALLRWHHPELGLISPSQFIPLAEETGLIVPIGKWVLRCACQ 694 Query: 482 QVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Q KW + G VAVN+S RQ + + ++Q+L+ + + +E+TES ++E+ Sbjct: 695 QARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILEATDLPPDCLKLEVTESGIMEHP 754 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 E A++ ++ G +DDFGTGYSSLS L RFPID +K+D+ FV D Q ++ Sbjct: 755 EQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFVIDSTTNKDDQEII 814 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 + I+A+A+ L + +AEGVE+ ++ FL +G + QG+ F +PMPA FE + Sbjct: 815 KTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPAEKFEDMLQ 869 Score = 104 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 10/135 (7%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + L +Q V I I D I N + G + +++GQ V Sbjct: 185 RKRAEKHLRQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPP 244 Query: 163 RREAAASRRNNRVFFRSGNAYEV---ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 + ++ E G ++ + + ++ S Sbjct: 245 EHRKP-------LTLERIKEWKGLIRESVNIRKDGTTFLVWLMSEIVKNAKGEPFAIVTS 297 Query: 220 GTDITEERRAQERLR 234 DITE ++A+E LR Sbjct: 298 CEDITERKQAEEALR 312 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 821 bits (2123), Expect = 0.0, Method: Composition-based stats. Identities = 186/558 (33%), Positives = 299/558 (53%), Gaps = 12/558 (2%) Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 L A V + + D+ I R N+ + +G +VIGQS KLF S R+ A Sbjct: 221 ELRVAATVFE-TQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSP-KLFNSGRQDKA 278 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 + + +A+ E+ + G + + DIT + Sbjct: 279 FYKEMWNSINTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVATFRDITTSKA 338 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHA--INHADNNKVGVVYLDLDNFKKVNDAYGH 286 A E++ LA D +T LPNR + D + H I+ N +++LDLDNFK +ND GH Sbjct: 339 ASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNFKTLNDTLGH 398 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASR------ILTR 340 GD LL+ V+ + C+ ++AR GGDEF+VL N S A+EA I+ Sbjct: 399 DVGDLLLQQVATRLTDCVREGDIVARLGGDEFVVLLENLSLQAIEAANKAKKVAKKIIFE 458 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 L +++ + +++ S+G+ + + + +++ AD AMY +K GR + F M Sbjct: 459 LAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRNTWHFFNKTMQ 518 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFIS 460 + + ++ +LRKA+E++Q +HYQ +++ G+ EAL+RWQ PERG + P +FI Sbjct: 519 ESIIARADMERDLRKAIEDNQFQLHYQAQVSSSGQTLGAEALIRWQHPERGQVSPFNFIP 578 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQ 518 AEE+GLI+P+G+WV+ Q+ W+ + +L +AVNISA+QL + +K L+ Sbjct: 579 LAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQVKATLK 638 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 + + +ELTES L+EN ++ + S++G LDDFGTGYSSL L + P++ Sbjct: 639 RHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQYLKKLPLN 698 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 IK+DQ FVRD+ +++VR I+ ++ +L++ VIAEGVE+ +E +L NG QG Sbjct: 699 QIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNGCTHYQG 758 Query: 639 FLFAKPMPAVAFERWYKR 656 +LF+KP+P FE K+ Sbjct: 759 YLFSKPVPINEFEVLLKK 776 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 821 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 194/591 (32%), Positives = 305/591 (51%), Gaps = 13/591 (2%) Query: 76 SVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQR 135 V L K+ + + S + R+ L + A I+I DS+G I R Sbjct: 123 EVELAEIKLAHSQVSTLNSELDEMLHKQRETEQELLISATAFE-AQDGIMITDSKGVILR 181 Query: 136 FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQ 195 N+ D TG + +GQ+ +L S R A ++ + E+W G+ Sbjct: 182 VNQAFTDITGYSSEEAVGQTP-RLLKSGRHDADFYAAMWQCIKNTGQWSGEIWDRRKNGE 240 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLI 255 + + + + S DIT + +++R+ LA D +T LPNR + D + Sbjct: 241 IYPKWLTITEVKSFDGSVVHYVSSQVDITARKASEDRIHNLAFYDPLTQLPNRRLLLDRL 300 Query: 256 DHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 H+++ D V ++++DLD FKK+ND GH GD LL+ V+ L+C+ +AR Sbjct: 301 RHSVSFSLRDGRHVALMFIDLDKFKKINDTLGHDIGDLLLKQVAERTLTCVRTCDTVARL 360 Query: 314 GGDEFLVLASNTS------QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHG 367 GGDEF+VL + + + + +I+ L + + E + S+GIAL EH Sbjct: 361 GGDEFVVLLDGLAGNLHEAAAQAKQIGRKIIDTLNQSYDLAGHEYQSGASIGIALFDEHC 420 Query: 368 SDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQ 427 + +++ AD AMY AK+ GR F PEM + + L+ + + AL +Q I YQ Sbjct: 421 QTAEDLLKQADIAMYQAKKAGRNTLRFFDPEMQASILARVALEKDFKDALLQEQFYICYQ 480 Query: 428 PKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW- 486 P I+ G V EALVRW+ RG++ P DFI AEE+GLIVPLG WV+ RQ++ W Sbjct: 481 PVISREGRVAGAEALVRWRHSIRGIVSPADFIPLAEETGLIVPLGNWVLKTACRQLSDWS 540 Query: 487 -RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALS 545 RD +L +AVN+SARQL + T + +++E + +ELTES L+ + E + Sbjct: 541 SRDDTRDLTIAVNVSARQLKQEDFVTTVMGLIEETGANPRRLKLELTESMLVSDAESIIV 600 Query: 546 VIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVA 605 + + G LDDFGTGYSSL+ L+R P+D +K+DQ FVR+I + + + A + Sbjct: 601 KMNLLKEAGITFALDDFGTGYSSLAYLSRLPLDQLKVDQSFVRNIETEDSAVVICAATIN 660 Query: 606 VAQALNLQVIAEGVESAKEDAFLTK-NGINERQGFLFAKPMPAVAFERWYK 655 +A L L+V+AEGVE+ + FL+ + + QG+LF+KP+ FE + + Sbjct: 661 LAHNLKLKVVAEGVENEAQRYFLSSVHQCDFLQGYLFSKPVAIDEFECFIR 711 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 821 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 186/613 (30%), Positives = 304/613 (49%), Gaps = 12/613 (1%) Query: 55 REMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAE 114 R + + S++ + V + + + E A++ + + A Sbjct: 195 RPIVKLQSTMESMQLSGSMEQFVPVKLEQGEQDEIGKLGLAFNQMSEALSNSERSMKLAA 254 Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 + AI++ D I N TG +V G++ + + + R + Sbjct: 255 SIYQSNADAIMVTDENNLIVDVNPAFTRITGYTLDEVRGKNPRIMQSGKHDNEFYRHMWQ 314 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 G ++ E+W G+ + + S + +DITE+++ E + Sbjct: 315 AILNEG-HWQGEIWDKRKTGEIYAKLAHISILRRSDGGVYRHVAQFSDITEKKQKDELIF 373 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQL 292 AN D++T LPNR + D + HA+ N+ +++LDLD FK +ND GH +GD L Sbjct: 374 WQANYDALTCLPNRRLLNDRLAHALAANKRNEDCGALMFLDLDKFKTLNDTLGHAYGDML 433 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS------ALEAMASRILTRLRLPFR 346 L +V+ I SC+ +AR GGDEF+VL N A +A +I L P++ Sbjct: 434 LVEVARRIKSCVREVDTVARIGGDEFVVLLENLGADIKDATQAAAHIAEKIRASLSTPYQ 493 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 + ++S S+G++L +G + +I+ AD AMY AKE GR F P+M Q V Sbjct: 494 LHDKMHHSSPSIGVSLIHCNGESAEELIKQADMAMYQAKEAGRNAVRFFDPQMQQSVETI 553 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 L+++LR A+ QL + YQ ++ EAL+RW P RG++ P FI +AEES Sbjct: 554 AALESDLRHAVHERQLQLFYQIQLDHTHHPVGAEALLRWIHPVRGMVSPAQFIPFAEESS 613 Query: 467 LIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEY 524 LI+ +G WV+ + RQ+A W +++ +L +AVNISARQ + ++++ + Sbjct: 614 LILDIGHWVLDEACRQIAAWSHQERTRDLVLAVNISARQFKQPDFVEQVGAMIRKHAIQP 673 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQ-LGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 + +ELTES +E ++ ++ + LG + LDDFGTGYSSLS L R P+D IK+D Sbjct: 674 ARLKLELTESIALEELDVIITKMHALRNGLGISLSLDDFGTGYSSLSYLKRLPLDQIKID 733 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 Q FVRD+ +V+ I+ +A ++VIAEGVE+A + L + G QG+LF + Sbjct: 734 QSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVIAEGVETAGQFFLLKQYGCLLFQGYLFGR 793 Query: 644 PMPAVAFERWYKR 656 P+P FE ++ Sbjct: 794 PVPLREFEALLQQ 806 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 820 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 198/572 (34%), Positives = 306/572 (53%), Gaps = 7/572 (1%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK 147 + G + D + + L QV A ++I D+RG I NR E TG Sbjct: 501 QVRGGVFSCRDITG-RKRIEESLRLHAQVFDTATEGVMIADARGRILSVNRAFEQVTGYS 559 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 +V+G++ L R++ A RR + + E+W G+ + + Sbjct: 560 AEEVVGRNPSILSSGRQDKAFYRRMWDT-IKGEGIWSGEIWNRRKDGEIYPEWLTISSIA 618 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN-- 265 G + +DIT ++R+++ + LAN D +TGL NRN +D + HAI+ A N Sbjct: 619 GPNGEASHFVAVFSDITAQKRSEQEIDFLANHDPLTGLANRNLFEDRLAHAISMAGRNGQ 678 Query: 266 KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT 325 VG++ +DLD F+ +ND GH GD LLR+ + C+ +AR GGDEF ++ Sbjct: 679 HVGLLLVDLDRFRLINDGMGHGPGDALLRETGRRLGHCVRDSDTVARLGGDEFGIILEGL 738 Query: 326 SQSALEAM-ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 + +A M A RIL +R P R+G E++ + S+GIA+ P G+D+ ++RHADTAM A Sbjct: 739 ADAADAGMQAERILEAMRAPLRLGGQELFCTVSIGIAVFPADGTDAATLLRHADTAMALA 798 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALV 443 K GR F +T + + VF L ++T LR ALE D+L +HYQP + G + ++E+L+ Sbjct: 799 KREGRNNFQFYTHALTEAVFSRLNIETGLRHALERDELRLHYQPILDAASGRIAAMESLM 858 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISAR 502 RWQ PERGL+ P FI AE+S LI+ LGRW ++ QV W D G+ + V+VNI A Sbjct: 859 RWQHPERGLVSPGVFIPVAEQSDLILALGRWALVSACAQVRAWSDAGLEPVPVSVNIPAC 918 Query: 503 QLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDF 562 + V++E + + +ELTES L+E LA I++ G V +DDF Sbjct: 919 HFRQPGFVEEVLGVVRETGVQPQSLIIELTESALMEPVSLAEERIRRLRDTGVVVAIDDF 978 Query: 563 GTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESA 622 GTGYSSL L RF ++ +K+D+ FV + ++++ A++ V+ +L LQV+AEGVE+ Sbjct: 979 GTGYSSLGYLQRFHVNYLKVDRSFVSGLPGDENARAITEAVIGVSHSLGLQVVAEGVETQ 1038 Query: 623 KEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 + L G ++ QG+L +P+ A Sbjct: 1039 AQLDHLRATGCDKVQGYLTGRPVTAEVAATLL 1070 Score = 64.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 57/172 (33%), Gaps = 17/172 (9%) Query: 80 VGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRL 139 V + +RE A + A +R QV+ AI LD+ ++ N Sbjct: 371 VANRSLQREVEQRRQAEAEVLAQSRRQ-------AQVLEAVDEAIFGLDADCRVEFANPA 423 Query: 140 CEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFL 199 E G + GQ + + R + S + + + I Q L+ Sbjct: 424 AEALAGCSIGQMRGQRLSGVLQIRDDQGRSAWEPDGDCLAEDPMP--VSIRRAFDQTLYH 481 Query: 200 FRNKFVHSG-------SGKNEIFLICSGTDITEERRAQERLRILAN-TDSIT 243 + + G + S DIT +R +E LR+ A D+ T Sbjct: 482 RDGRVLVVDYAFRPILEGGQVRGGVFSCRDITGRKRIEESLRLHAQVFDTAT 533 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 189/584 (32%), Positives = 312/584 (53%), Gaps = 9/584 (1%) Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQ 134 +S+ ++N R G +A+HD + + + L A +V+ I+I D+ G I+ Sbjct: 230 VSLVSTPLRVNDR-ITGAVTAFHDI-SDRKKVEERLLLAAKVIETTTEGIMITDAGGVIE 287 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 N TG E + IG S L R + R+ + +G ++ E+W G Sbjct: 288 SVNPAFCRSTGYSESEAIGNSPRILKSGRHDGEFYRKMWKALLETGQ-WQGEIWNRRKSG 346 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDL 254 + + S +DITE++R QER++ A D++T LPNR D Sbjct: 347 ELYAAWLTISAIKDSHGRTTQYAAIFSDITEDKRNQERIKHQAYHDALTDLPNRLLFIDR 406 Query: 255 IDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLAR 312 + AI A N + V++LDLD FK++ND YGH GD LL+ V+ + + +AR Sbjct: 407 LTQAIAQATRNCYMLAVLFLDLDRFKQINDTYGHALGDLLLQGVAGRLRRAVRDSDTVAR 466 Query: 313 PGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLI-EVYTSCSVGIALSPEHGSDS 370 GGDEF +L S +A +IL LR P+ I + S+GIA+ P G ++ Sbjct: 467 LGGDEFTILLPQIGSVEDAAKVAQKILASLRQPWSFEGIPSFCITTSIGIAVCPTDGEEA 526 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 ++ +AD AMY AK GR + ++TPE+N FE L ++T LR+AL+ + V++YQPK+ Sbjct: 527 ETLMHNADAAMYRAKAQGRNHYQLYTPELNAWAFERLAMETRLRRALDQGEFVLYYQPKV 586 Query: 431 TW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 G ++EAL+RWQ P+ GL+ P +F+ AE++GLIVP+G W + + + W+D Sbjct: 587 EAATGNWCAVEALIRWQHPDLGLVSPTEFLRLAEDTGLIVPIGEWCLEEACVRNKAWQDA 646 Query: 490 GIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQ 548 G+ +R+AVN+SARQ + A+++ LQ+ +++E++E ++ +LA V+ Sbjct: 647 GLPPVRMAVNLSARQFQHPNLLAAVEKALQKSGLPPAWLELEISEEVILRFADLAPIVLG 706 Query: 549 QFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQ 608 LG + +D +G S ++ L + PID +K+ V D+ ++ V+A++A+A+ Sbjct: 707 DLKSLGLSLTMDQYGKRDSRITLLQKLPIDRVKIAASQVIDLSACHDARKSVKALIALAR 766 Query: 609 ALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 +L+L V A+GV + ++ FLT G +E QG LF+ P+ A R Sbjct: 767 SLDLHVAADGVGTREQCDFLTAAGCDEIQGHLFSDPLSAEEMGR 810 Score = 79.5 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 51/150 (34%), Gaps = 6/150 (4%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 + L + V S +++LD+ G + N E G Sbjct: 115 LRQRVRRLLQAQHTEKALKARETQLSAVASALGEGLIVLDAEGRLTFMNPEAERLLGWSL 174 Query: 149 HDVIGQSVFKLFMSRR-EAAASRRNNRVFFRS---GNAYE-VELWIPTCKGQRLFLFRNK 203 +++G+ + + +RR E + + ++ G Y E + G + Sbjct: 175 PELLGKKIHSIIHNRRPEGDPIAEADCLVLKTIGAGETYRSDEEYFTRKDGALFPVSLVS 234 Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERL 233 + + + + DI++ ++ +ERL Sbjct: 235 TPLRVNDRI-TGAVTAFHDISDRKKVEERL 263 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 819 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 176/577 (30%), Positives = 294/577 (50%), Gaps = 14/577 (2%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + + G + D + AR + A A+++ D++ I R NR + T Sbjct: 454 RQEDKEGAVVTFRDI-SEARKADELMRIAAIAFE-TQEAMLVTDAKSQILRVNRAFTEVT 511 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G + IGQ+ L S + ++ + + E+W G+ + Sbjct: 512 GYSAAEAIGQTPA-LLKSGYHEDSFYKDLWTSLKENGLWRGEIWNRRKNGEIYPEWLTIS 570 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA-- 262 G + S DIT+ + A+E+++ LA D +T LPNR + + + A+ + Sbjct: 571 AVRGQHGEITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLPNRRLLNERLSKALTSSGR 630 Query: 263 DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 ++++DLDNFK +ND+ GH GD LLR V+L + + + ++R GGDEF++L Sbjct: 631 QRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESVRSNDTVSRLGGDEFVILL 690 Query: 323 SNTSQ------SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRH 376 S + +E +A ++L L P++ G + + S+G + ++++ Sbjct: 691 EELSPNIHDATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASIGAIPFMDATETIESLLKS 750 Query: 377 ADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEV 436 AD AMY AK G+ + F P M V L+ +LR+A Q V++ QP++ G V Sbjct: 751 ADMAMYKAKAAGKNRLFFFDPAMQTEVEARAALERDLRQAQREKQFVLYLQPQVDQSGHV 810 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG--INLR 494 EAL+RWQ P GLI P +F AEE+ LI+P+G+WV+ + +Q+ W+ +L Sbjct: 811 SGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEEACKQLVIWQKNPDTAHLT 870 Query: 495 VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFS-QL 553 +A+N+SA Q + + + + E + +E+TES L+E+ + + +Q QL Sbjct: 871 LAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLLLEDIDGTIERMQVLKNQL 930 Query: 554 GAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQ 613 G + LDDFGTGYSSLS L + P+D IK+D+ FV+DIH P ++ A++A+ ++ +L Sbjct: 931 GVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPNDAAIAEAVIALGRSFSLN 990 Query: 614 VIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 VIAEGVE+ ++ L G QG+LF +P P AF Sbjct: 991 VIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAF 1027 Score = 74.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 7/136 (5%) Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 L ++ + +D G N + G +VIG F R + Sbjct: 351 ALRERASLLDSLGEGVYGIDQNGQCTFINPKALEMLGWTADEVIGSDQHARFHHHRPDGS 410 Query: 169 SRRNNR----VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 + R G + E W G+ + + S +++ + + DI+ Sbjct: 411 IYPSADCPVYQTLRDGQRRQGEEWFFNKDGRGFPVQYSVTPISRQ-EDKEGAVVTFRDIS 469 Query: 225 EERRAQE--RLRILAN 238 E R+A E R+ +A Sbjct: 470 EARKADELMRIAAIAF 485 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 819 bits (2117), Expect = 0.0, Method: Composition-based stats. Identities = 188/577 (32%), Positives = 296/577 (51%), Gaps = 6/577 (1%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK 147 E+ G + D + + L A +V +I++ D+ I N D TG Sbjct: 763 EFIGYIGSCIDI-SDRKKGDESLLLAGKVFEAVRESIIVTDANRVIVAVNPAFSDMTGYS 821 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 + +G++ L R R + G +++ E W G+ + Sbjct: 822 PEEAVGRTPAFLQSGRHGKEYYAAMWRAVDQEG-SWQGEFWNRRKNGELFAVLETIVTVR 880 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK- 266 + I DI+ + A+E + LA D ++ LPNR + + ++A+ A+ K Sbjct: 881 DETGAMVNYIGVAADISSLKEAEEHIHHLAYYDPLSALPNRRYLMERAEYALALAERRKE 940 Query: 267 -VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT 325 + VV+LD+D+FK VND+ GH GD+LL V+ I +AR GGDEF +L + Sbjct: 941 ELAVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGDEFALLLPDL 1000 Query: 326 SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAK 385 + A+ +A +IL LR PF + S+GI+L P G+D ++R+ADTAMY AK Sbjct: 1001 GRDAVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYPHDGTDFETLLRNADTAMYHAK 1060 Query: 386 EGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVR 444 + GR QF + P MN + L + + LR+A+ +L +QP+I G + EALVR Sbjct: 1061 QQGRNQFRFYDPGMNVDILARLTVLSELREAIPAGELRTFFQPEIDLANGTLVGAEALVR 1120 Query: 445 WQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQ 503 WQ P RGL+ P FI AE + LI+ + WV+ D R +A+W+ + V VN++AR Sbjct: 1121 WQHPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRHLAQWKKADQAPITVGVNLAARH 1180 Query: 504 LADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFG 563 D + +K +L + +ELTES L++ D + V+Q+ LG + +DDFG Sbjct: 1181 FRDPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIALGCSLSIDDFG 1240 Query: 564 TGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAK 623 TGYSSLS L PI +K+DQ FVRDI +++ +VA+ +L L+VIAEGVE+ + Sbjct: 1241 TGYSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGLKVIAEGVETEE 1300 Query: 624 EDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 + L + G + QG+LF++P+ + F +W + R Sbjct: 1301 QRRILLEQGCDFGQGYLFSRPLSSKEFIKWRMEHALR 1337 Score = 84.6 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 48/148 (32%), Gaps = 7/148 (4%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQV---VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 +S H A + + V A+ AI++ D I N D G Sbjct: 337 RSSERHHMQAALEAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSR 396 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 ++ G ++ + E R + R G + E G + + + S Sbjct: 397 EELAGMTLADVVAGDVEGVEHGRLDEALARGGGVW--ESVHTRKDGVPVPVELSVRSISV 454 Query: 209 SGKNEIFLICSGTDITEERRAQERLRIL 236 G + F+ D+TE +R + L Sbjct: 455 EGSD--FVQAIVRDVTERKRIELALARQ 480 Score = 53.0 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 8/136 (5%) Query: 100 PAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 R+ A + A I + D+ FN + ++TG +G Sbjct: 655 EMRLRESEERFRLAA---NSAPVLIWMGDTARGCTFFNDMWLNFTGRSLEYELG---DGW 708 Query: 160 FMSRREAAASRR--NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 SR F + +E+E + G+ + +G I I Sbjct: 709 LEGMHPEDRSRWICAYSAAFDARKPFEIEYRLRRRDGEYRTILGKATPRFDAGGEFIGYI 768 Query: 218 CSGTDITEERRAQERL 233 S DI++ ++ E L Sbjct: 769 GSCIDISDRKKGDESL 784 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 819 bits (2116), Expect = 0.0, Method: Composition-based stats. Identities = 202/674 (29%), Positives = 339/674 (50%), Gaps = 25/674 (3%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAAR-------- 53 + R TL +F W L S ++ + +R ++ Sbjct: 237 RNSRRIETLSSFKHLKTTDWILAASYPIV--EAYAPLKTNRIYFITVMAVGTSVTLLFVW 294 Query: 54 --IREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLS 111 ++ +T S + + +H + K E +A++ + L Sbjct: 295 FLMQRLTSPLSLITRHVEAIPDKSGLHNLINLERKDELGTLINAFNSMILSLDQHQNALR 354 Query: 112 FAEQVV----SEAHSAI-VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 +E A+ + +I DS ++ N+ + G +++ ++ + Sbjct: 355 ESESNFRALADNANDGLQIITDSS-HLAYVNKRAAEIVGYSVEEMLLTTIETIIHPDHLQ 413 Query: 167 AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEE 226 R + + E+ + G + + GK + DIT+ Sbjct: 414 MIIERKAKTDAGEFVPKQFEIMLAHRNGSCVPVEVTTARTIWQGKQVE--LAIVRDITDR 471 Query: 227 RRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAY 284 ++A++ ++ LA D++TGLPNR+ +QD + I A DN KV +++LDLD FK +ND Sbjct: 472 KKAEDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTL 531 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRL 343 GH+ GD LL V+ + C+ +AR GGDEF+++ S L +A +IL + Sbjct: 532 GHVAGDSLLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISK 591 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 P + E++ + S+GIA+ PE G+D ++++AD AMY AK+ G+ F F+ EMN + Sbjct: 592 PLVLNDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQA 651 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYA 462 E+L L+ +LR+ALE ++ VI YQP++ G + +EAL+RWQ P+ GL+PP FI A Sbjct: 652 LEHLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMA 711 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELN 521 EE+GLI+P+G W + + W D G LRVAVN+ Q + ++ VL++ Sbjct: 712 EETGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTG 771 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 +++ELTES L+ E + +V+ + ++G + +DDFGTGYSSLS L FPI+ +K Sbjct: 772 LAPSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVK 831 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ F+RD+ P ++V AI+A+A LNL+V AEGVE+ + FL+ NE QG+L Sbjct: 832 IDRSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLL 891 Query: 642 AKPMPAVAFERWYK 655 + P+P F R+ + Sbjct: 892 SSPLPEAEFTRFLR 905 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 191/586 (32%), Positives = 309/586 (52%), Gaps = 7/586 (1%) Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF 136 + GR ++ + + + + L+ A V + I D G I Sbjct: 367 MEEQGRGVSTDSTGLTIEGYIEDVTERIEAENRLNQAAAVFRSTGEGVAITDQNGTIVDV 426 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR 196 N TG +VIG++ L + + A N + + E+W G Sbjct: 427 NEAFTKITGFDRDEVIGKNTRILQSGKHDIA-FYENMWEQIQKHGHWRGEVWNRAKSGTI 485 Query: 197 LFLFRNKFVHS-GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLI 255 G+ + DIT + + RL LA+ D++T LPNR ++ + Sbjct: 486 YPEILTISAIDFKKGQQPSGYVGVFADITSLKETEARLDHLAHYDALTELPNRLLFRERL 545 Query: 256 DHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 H++ ++ KV V++LDLD FK +ND GH GD LL +++ + + + R Sbjct: 546 IHSLLMSERKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASRLRHVVRMGDTVGRI 605 Query: 314 GGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTA 372 GDEF ++ + + + + +IL+ +I + S S+G+A+SP++ +D+ A Sbjct: 606 SGDEFCLILEDIQDVTDVVPIVEKILSVFSQTIQINSHMLQISASIGVAISPDNSNDADA 665 Query: 373 IIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW 432 ++ +D+AMY AKE GR + +T EM Q+ E+ ++ + LR ALE Q + YQP++ Sbjct: 666 LLSFSDSAMYEAKEAGRNTYKFYTAEMTQQALEHSFVQSALRDALEQSQFFVTYQPQLRI 725 Query: 433 RG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI 491 + + +EALVRWQ PERGLIPP FI AE SGLI LG W++ Q +W ++ + Sbjct: 726 KDYSMVGVEALVRWQHPERGLIPPDSFIPIAENSGLIRELGAWILRTACEQGVQWLNEQV 785 Query: 492 NL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQF 550 N R+ VN+SA QL D++ A+ L+E F + +E+TES ++++ + A++V+ F Sbjct: 786 NFGRIYVNVSATQLHDESFTEAVIMCLKETGFPAEKLGLEVTESFIMKDPQHAINVLSSF 845 Query: 551 SQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQAL 610 ++G ++ +DDFGTGYSSLS L + PID +K+DQ F+RDI P ++ A++A+ +AL Sbjct: 846 KEIGIELAIDDFGTGYSSLSYLKQLPIDKLKIDQSFIRDIPDDPNDMAIAEAVIAMGKAL 905 Query: 611 NLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 NL+VIAEGVES + FL E QG+L+A P+ A AF W K+ Sbjct: 906 NLEVIAEGVESQIQADFLLDKECTEVQGYLYAHPLTADAFSEWEKQ 951 Score = 56.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 42/144 (29%), Gaps = 3/144 (2%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 A D + L VV + I G I N+ G D+ Sbjct: 130 QAIDKTDKAIAEKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTSEDL 189 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW-IPTCKGQRLFLFRNKFVHSGSG 210 +G + L + A N S + E I + N+ + + G Sbjct: 190 VGSNFLDLIPEG-DRPALISNISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIFNRQG 248 Query: 211 KNEIFLICSGTDITEERRAQERLR 234 + E + G DIT+ + L Sbjct: 249 EIESYQ-SIGEDITQRMIQERALE 271 Score = 45.3 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 47/146 (32%), Gaps = 4/146 (2%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 A +D+ + + L + E V + IL+ G + N++ G D Sbjct: 1 MAQMTNDSKFLEK-LKNSSDLFEIVFDHQFQFMAILEPDGRVISVNQVALSQQGYTREDF 59 Query: 152 IGQSVFKLFMSRREA---AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 +G+ ++ R A ++ + + + + + G Sbjct: 60 VGRYFWESASWRHLPDWEAIWKKRLKAAYENRSPIFTDDVYEAHDGSIRHADAVTIALFD 119 Query: 209 SGKNEIFLICSGTDITEERRAQERLR 234 S + D T++ A++ LR Sbjct: 120 SDGKLNGYLIQAIDKTDKAIAEKALR 145 Score = 41.8 bits (98), Expect = 0.085, Method: Composition-based stats. Identities = 33/226 (14%), Positives = 69/226 (30%), Gaps = 28/226 (12%) Query: 34 TTETTEPDRTLQLSAE--QAARIREMTVITSSLMMSLTVDESDLSVHLVG-RKINKREWA 90 T+E L L E + A I ++ + +S + L +G ++ R Sbjct: 185 TSEDLVGSNFLDLIPEGDRPALISNISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIF 244 Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL--------------DSRGNIQRF 136 ++ D++ + E+ + + A + + + Sbjct: 245 NRQGEIESYQSIGEDITQRM-IQERALESS-EAQLSTLIGNLPGVAFQCLNNRNWTMLYL 302 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF----FRSGNAYEVELWIPTC 192 + CE+ G +I ++ R ++ Y+V + Sbjct: 303 SDRCEEIFGYTAESLI--KSRYCSYAQLIEPGYREYVWAAVQNSLKTQTPYKVLYKLKHS 360 Query: 193 KGQ-RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 G+ R + + V + S I D+TE A+ RL A Sbjct: 361 SGESRWMEEQGRGVSTDSTGLTIE--GYIEDVTERIEAENRLNQAA 404 >UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Shewanella RepID=A0KRF8_SHESA Length = 1077 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 202/613 (32%), Positives = 324/613 (52%), Gaps = 15/613 (2%) Query: 60 ITSSLMMSLTVDESDLS-------VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF 112 I S M+ +T +D+ +++ E A A A + + + +H LS Sbjct: 451 IIRSFMVKITKIANDMQQMAADPQLNINIDASGTDELARMAQAMNRMISERQKANHALSR 510 Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 A V + + I++ D+ +I+ N TG +V G+S L +R Sbjct: 511 AAAVFNYSAEGIMVTDADNHIELINPAFSQITGYSLEEVKGRSPSILSSNRHPHHYYTAM 570 Query: 173 NRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQER 232 + G +E E+W GQ + V I I DI++ ++ ++ Sbjct: 571 WEALHKEGK-WEGEIWNKRKDGQVYPEYLAITVVRNEQGEIIQHIGLFMDISKRKQYEQD 629 Query: 233 LRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGD 290 L AN D++TGLPNR + + H I A + K+ ++ +DLD FK +ND GH GD Sbjct: 630 LWYQANFDTLTGLPNRKLFNERLQHEIQLAQHDSRKLAILLIDLDQFKYINDVQGHATGD 689 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGL 349 LL+DV+ + + + +AR GGDEF+++ + A+E MASRI+ L PF + Sbjct: 690 LLLQDVAKRLENIAGKNDFVARIGGDEFVLILPRVTNEFAIEHMASRIIETLATPFNLNE 749 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWL 409 E+ S S GI + PE G D +++ R+ + AMY AK+ GR F FT MNQ +F + L Sbjct: 750 REIQISASFGIGVYPEDGLDVSSLTRNTEMAMYQAKDAGRNNFKYFTSGMNQAMFARMEL 809 Query: 410 DTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 + LR+A+ D+ + YQP + G++ S+EAL+RWQ P+ GLIPP FI+ AEE+GLI Sbjct: 810 EQRLRRAVAQDEFTLFYQPIVDMKTGQICSVEALIRWQDPDLGLIPPDQFIAIAEETGLI 869 Query: 469 VPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQL---ADQTIFTALKQVLQELNFEYC 525 P+G WV+ + + +W+ G+NL VA+N+S+RQ L++ + Sbjct: 870 EPMGEWVLNQAMHDLRQWQHMGLNLNVAINVSSRQCINTRGIGFDQVLQECFNRHHINPR 929 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 + +E+TES L+ + LS ++ LG+Q+++DDFGTGYSSLS L +FPI IK+D+ Sbjct: 930 NVHIEITESMLMGDASHCLSTLESIRHLGSQIYIDDFGTGYSSLSYLKKFPISVIKIDRS 989 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 FV + + +LV+AIV + Q+L ++++AEG+E+ + FL G + QG+L +KP+ Sbjct: 990 FVEHALENCSNANLVKAIVMMGQSLEMELVAEGIETEAQWQFLRDLGCHYAQGYLLSKPL 1049 Query: 646 PAVAFERWYKRYL 658 P + L Sbjct: 1050 PFDEITPLLGQTL 1062 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 817 bits (2112), Expect = 0.0, Method: Composition-based stats. Identities = 170/568 (29%), Positives = 298/568 (52%), Gaps = 5/568 (0%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 +D D+ A+ + ++ +I+I D++ I N E TG +VIG++ Sbjct: 1 MYDHDQQLIDIHTFAGIAKNIFEYSNESIIITDAQNRILFVNPAFEIVTGYSAEEVIGKN 60 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 L + ++ + ++ E+W G+ + V N Sbjct: 61 PRILQSGMHDKQFYKKMWND-IKQHGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTN 119 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLD 273 + +DITE +R E+L LA D++T +PNR ++ ++ I + N +++LD Sbjct: 120 YVAMFSDITEHKRNVEQLTRLALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLFLD 179 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEA 332 LD FK +ND GH GD LL++ + + L +AR GGDEF+++ N Sbjct: 180 LDRFKNINDTLGHRVGDMLLKETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREAAY 239 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 MA +I+ L+ PF E+Y S S+GI++ P G+D +IR AD AMY AK+ GR Q+ Sbjct: 240 MAEKIVESLKRPFCFNHQEIYISTSIGISVYPYDGTDKETLIRMADRAMYQAKKNGRNQY 299 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERG 451 ++ M+ + L+T LRKALE + ++YQP++ + ++R++EAL+RW PE+G Sbjct: 300 ALYHAGMHGNGKQLFQLETALRKALERGEFELYYQPQLDIKTKQIRAVEALIRWNHPEKG 359 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFT 511 I P FI AEESGLI P+ W+++ + + + + +++++NIS Sbjct: 360 FISPGMFIPLAEESGLITPISDWIMMQACEHLKQLQLRFPYVKMSINISPIYFQQIDFLK 419 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 L++ ++ +N I++ELTES ++ + E ++ + + +G + +DDFGTG+SSLS Sbjct: 420 KLQKTIESVNVNPRLIELELTESAVMPHAEQSVERLTKLKTMGMSIAIDDFGTGFSSLSY 479 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L RFPID +K+D+ F + + + ++V+AI+ +A +L ++V+AEGVE+ K+ L K Sbjct: 480 LHRFPIDILKIDRSFTKQLSRYQQDSAIVKAIIMMAHSLQIRVVAEGVETKKQYQILEKQ 539 Query: 632 GINERQGFLFAKPMPAVAFERWYKRYLK 659 + QG+ +KP+ + + Sbjct: 540 SCDFVQGYYVSKPLSISELYEFLDMWNH 567 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 200/594 (33%), Positives = 320/594 (53%), Gaps = 14/594 (2%) Query: 74 DLSVHLVGRKINKRE-WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGN 132 D+ VH ++N R+ G + L A +V + I+ILD+ Sbjct: 207 DMEVHSRLFELNGRKAVIGVVMDISERLLA----DTNLRLAAKVFENSAEGILILDAGAR 262 Query: 133 IQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTC 192 I N TG E + +G++ ++ AA ++ ++ E+ Sbjct: 263 IIAVNDAFTRITGYAEEEALGKASRIFSAEQQARAAMQQALADC----GHWQGEMLDRRK 318 Query: 193 KGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQ 252 GQ + + +DIT+ + A+ERL+ LAN D +T LPNR+ + Sbjct: 319 GGQWYPAELSISALRDEDGLLSNYVAVFSDITQRKEAEERLQFLANHDPLTRLPNRSRLT 378 Query: 253 DLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVL 310 +D A+ D ++ V+++DLD FK +ND++GH GDQLL ++++ + + +L Sbjct: 379 ASLDEALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRVVGERGML 438 Query: 311 ARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSD 369 AR GGDEF +L S S L MAS IL L P + EV+ + S+GI++ P G D Sbjct: 439 ARLGGDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISVFPHDGRD 498 Query: 370 STAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK 429 + ++++AD AMY AKE G+ + F MN + FE L L+ LR ALE + +HYQP+ Sbjct: 499 ARTLLKNADVAMYRAKEAGKNTYQFFDIGMNTQTFERLLLENGLRMALERHEFELHYQPQ 558 Query: 430 ITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD 488 ++ + EAL+RW+ P+ GL+PP FI+ AEE+GLI P+G WV+ + RQ+A W Sbjct: 559 LSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACRQLAAWDA 618 Query: 489 KGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVI 547 +G+ + R+AVN+S RQ ++ + LQ +++E+TES ++++ A+S++ Sbjct: 619 QGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSPTEAVSLL 678 Query: 548 QQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVA 607 + LG + +DDFGTGYSSLS L RFP+D +K+DQ FV + + ++ AI+A+A Sbjct: 679 SELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIAEAILAMA 738 Query: 608 QALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 + L QV+AEGVES ++ AFL G + QG+ F +P+PA F + + A Sbjct: 739 KKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGEFAALAAGWRREA 792 Score = 54.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 49/146 (33%), Gaps = 6/146 (4%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 + + R+ +V ++ I I+ + N + G + ++ Sbjct: 105 DITQARQEQKAKREAEDRYL---ALVEQSLVGIYIM-QDEKLAYVNPKLAEIMGYQPEEM 160 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 G ++ +L + ++ R F + + G + + + + +G+ Sbjct: 161 EGMTMPQLLVPGEAERLRQQLLRRFRDNISVMHYATRGLRKDGVLVDMEVHSRLFELNGR 220 Query: 212 NEIFLICSGTDITEERRAQERLRILA 237 + I DI+E A LR+ A Sbjct: 221 KAV--IGVVMDISERLLADTNLRLAA 244 Score = 54.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 44/126 (34%), Gaps = 7/126 (5%) Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 V+ + + + + D G N G+ ++G+ +F + ++ +V Sbjct: 2 VNHSPTMMSLKDMDGRYLLVNAAYARRVGVSAESLLGRRPEDVFDAEDARQIREQDQQVL 61 Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR-----AQE 231 E ++ G +L +KF + + TDIT+ R+ + Sbjct: 62 NLLSPRQFDEHFVL--NGVETYLLASKFPLFDADGRPAGVGSVDTDITQARQEQKAKREA 119 Query: 232 RLRILA 237 R LA Sbjct: 120 EDRYLA 125 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 816 bits (2108), Expect = 0.0, Method: Composition-based stats. Identities = 197/562 (35%), Positives = 309/562 (54%), Gaps = 5/562 (0%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + R + +V + IV+L+ ++ N E TGL D+ G+ Sbjct: 275 EDITAQRQSQETMRLLGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGR-PA 333 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 +LF S + E+W +G + Sbjct: 334 RLFASGLHENDFLATVAAEVDRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYV 393 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLD 275 + TDIT+ +R +E +R AN D +T LPNR+ + D ++ A++ A +V V++LDLD Sbjct: 394 AAITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLD 453 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MA 334 FK++ND+YGH GD++L+ + + +C+ + R GGDEF+V+ SN A +A Sbjct: 454 RFKQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIA 513 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 +IL L PF IG EV+ SVGI P+HG + ++R+AD AMY AK+GG ++ + Sbjct: 514 EKILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAI 573 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIP 454 FTP+M +R L ++++LR AL D+ +H+QPK+ + EAL+RW+ PE+GLI Sbjct: 574 FTPDMARRSLALLTMESDLRHALARDEFELHFQPKVRADLTLIGAEALIRWRHPEKGLIN 633 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQTIFTAL 513 P DFI AEESGLI+P+GRW + + +V WR +G+ + V+VN+S RQ DQT+ + Sbjct: 634 PGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETV 693 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 +Q+L E E +D+E+TE+ + + E A+ ++ LG + +DDFGTGYSSL+ L Sbjct: 694 RQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLK 753 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 FPID +K+DQ FVRD+ ++V I+A+A+ L V+AEGVE ++ FL Sbjct: 754 TFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDC 813 Query: 634 NERQGFLFAKPMPAVAFERWYK 655 QGFL+++P+P F + + Sbjct: 814 QNFQGFLYSRPLPPAEFTTFLR 835 Score = 76.1 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 24/152 (15%), Positives = 44/152 (28%), Gaps = 10/152 (6%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL-K 147 + +A R + A I G N G Sbjct: 145 ITRDMTAQVAAENALRAAEGKYR---AIFENAVEGIYQSTPDGTYLDVNPALARIYGYAS 201 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA---YEVELWIPTCKGQRLFLFRNKF 204 ++I + R + R + E+W C G +++ N Sbjct: 202 PAELI-AHFTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVW--RCDGHTIWITENAR 258 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 G ++ + DIT +R++QE +R+L Sbjct: 259 CVRGPDNEVLYYEGTVEDITAQRQSQETMRLL 290 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 815 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 192/597 (32%), Positives = 321/597 (53%), Gaps = 11/597 (1%) Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 + L+ V + + + + + R L + QV Sbjct: 491 AVLVTPHGVRRRLALSARTLQVVGQGHY---VTGSVQDVTSLRRAERELMLSAQVFEHGS 547 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV-FKLFMSRREAAASRRNNRVFFRSG 180 A+ I D+ I R N E TG +V+G + F+ S + S+R Sbjct: 548 EAVFITDASHRILRVNPAFEAITGYAAGEVLGLTPDFRCVSSPGGTSISQR--WELAEQT 605 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 ++ E+ G+ + + V + + ++ I +DI+ + A+ R LA D Sbjct: 606 GRWQGEIVCRRRSGEHYYEWSALSVVRHANGSVLYFIGQFSDISAVKAAEARALRLACFD 665 Query: 241 SITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 +TGLPNR+ + D + +N + + V++ DLD FK +ND+ GH GD +L++V+ + Sbjct: 666 PLTGLPNRSLLFDRLQEVLNR-EPHNGAVLFCDLDRFKNINDSLGHTLGDAVLKEVARRL 724 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 ++ + + R GGDEF+++ S LE +A ++L + P + +++ + S+G Sbjct: 725 VARVRPGDTVCRYGGDEFVLVLPGLSDCVVLEQLAEQLLADVSSPILLDGLDLRVTPSLG 784 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 +A+ P G+D A++RHAD A+Y AK GR + FT E++ RV EYL ++ LR ALE Sbjct: 785 VAVFPRDGNDCDALLRHADAALYHAKSRGRNTYRFFTREIDDRVSEYLHIEHGLRSALER 844 Query: 420 DQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 + +HYQP++ G V +EAL+RW+ PE+G+I P+ F+ AEE+GLIVP+G WVI + Sbjct: 845 GEFELHYQPQVDMAFGRVVGVEALLRWKHPEQGMISPVRFVPIAEETGLIVPIGMWVIRE 904 Query: 479 VVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 RQ WR G+ + +AVN+S RQ + + A+ + L + + + VE+TES ++ Sbjct: 905 ACRQAMLWRRAGLRPMTMAVNLSGRQFSRS-VIEAIDEALADSGLDPRWLQVEVTESVIM 963 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 E+ + A +V++ G V +DDFGTGYSSL+ L RFPID +K+D+ F+RDI + Sbjct: 964 EDTQEAYTVLEALRARGLTVAVDDFGTGYSSLAYLKRFPIDKLKIDRSFIRDIDLDEDNP 1023 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 +V AI+ +A L ++V+AEGVE+ + +L + G +E QG+L ++P PA A +W Sbjct: 1024 VIVDAIIGMAHNLRIKVLAEGVETRAQWDYLRQQGCDEVQGYLVSRPQPAAALGQWM 1080 Score = 52.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 5/193 (2%) Query: 36 ETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASA 95 E +P + A A ++ T S L L V GR + +R+ G Sbjct: 214 ERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGDWLHVFERGR-VYQRDADGKPLR 272 Query: 96 WHD-TPAVARDL--SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 H ++R L E +V+ + A+ +D+ G + + + +V Sbjct: 273 MHGVIIDLSRQLHAEEAQRRLEGIVAASSDAMAFIDTEGLVGFASPALCHLLSIGTQEVR 332 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G+ + +L + + +G ++ W+ G L + + + Sbjct: 333 GRQLEELLAAYANRRELMQGIEGAL-AGRNLRMQTWLTLPGGGVRCLESSFDPYRNTEGQ 391 Query: 213 EIFLICSGTDITE 225 + +C D+T+ Sbjct: 392 VVGAVCVLRDMTD 404 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 814 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 188/563 (33%), Positives = 287/563 (50%), Gaps = 7/563 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 D + L A + + ++I D+ I N TG DVIG++ Sbjct: 342 DREVQRKAAEQSLQLAASIYENSSEGMMITDADNLIMAINPAFTRITGYAMEDVIGKNPG 401 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L R + + +G + E+W G+ + I Sbjct: 402 ILKSGRHDMDFYQAMWNEILGTGK-WIGEIWDRRKSGEVYPKWLTINTVFNDDGKVHHRI 460 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKV--GVVYLDLD 275 TDI++++ ++E + AN D +TGLPN D ++ I + ++ VV+LDLD Sbjct: 461 ALFTDISQKKESEELIWRQANFDHLTGLPNWRMFHDRLEQEIKKSRRVELPLAVVFLDLD 520 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMA 334 +FK+VND GH GD LL++ +L + SC+ +AR GGDEF +L S +E + Sbjct: 521 HFKEVNDTMGHATGDLLLKEAALRLSSCVRESDTVARLGGDEFALLLGELSDQDSIERVN 580 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 IL + PF++G Y S S+G+ + P ++ A++R+AD AMY AK GR + C Sbjct: 581 ECILNKFSAPFQLGNELAYISVSIGVTIYPSDATEIEALLRNADQAMYAAKNSGRNRSCY 640 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 +T M + L +L KAL DQ + YQP + G + EAL+RWQ P RGL+ Sbjct: 641 YTQAMQSVAQNRMSLSNDLHKALAQDQFRLVYQPIVELETGSIHKAEALIRWQHPNRGLV 700 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLA-DQTIFT 511 P DFI AE+SGLI+ +G WV QV WR G ++++++N S Q D Sbjct: 701 SPADFIPIAEQSGLIIQIGDWVFRQAANQVKHWRGAYGKDIQISINKSPVQFKSDSNTHL 760 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 A + L+EL+ +E+TES L++ + +S + F +G QV LDDFGTGYSSLS Sbjct: 761 AWFEHLKELDLSGGCFAIEITESLLMDASDTIVSKLMAFGNIGMQVALDDFGTGYSSLSY 820 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L +F ID IK+DQ FVR++ +L A++ +A L ++VIAEGVE++++ L Sbjct: 821 LKKFDIDYIKIDQSFVRNLAPDSSDLALCEAMIMMAHKLGIKVIAEGVETSEQRDLLRTA 880 Query: 632 GINERQGFLFAKPMPAVAFERWY 654 G + QG+LF++P+ FE Sbjct: 881 GCDYGQGYLFSRPLSTEDFEGLV 903 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 814 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 172/560 (30%), Positives = 280/560 (50%), Gaps = 12/560 (2%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 ++ L A + I+I D+ +I + N TG DV+G++ L Sbjct: 275 ALKNAETSLRIAATAFESS-DGILITDAGCSILQVNSAFTTITGYSAEDVVGKNPRIL-S 332 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 S R + + + E+W G + T Sbjct: 333 SGRHDQLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERITISEVKDKDGKVTNYVSVFT 392 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKK 279 DI+E + + E++ LA D +T LPNR + D + A + + K ++++DLD+FK Sbjct: 393 DISESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSSSRTGKKGALLFVDLDHFKV 452 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA----- 334 +ND GH GD LL+ + + C+ +AR GGDEF+V+ + ++A EA A Sbjct: 453 LNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVVVLEDLDRNATEAAAIAEQI 512 Query: 335 -SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 ++IL+ L P + G + ++ S+GI L + +++ AD +MY AK+ GR Sbjct: 513 GNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHEIEDLLKQADISMYQAKKAGRNTLR 572 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLI 453 F P M +++ L++ LR A+E QL ++YQ ++ + EAL+RW PERG + Sbjct: 573 FFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQVDDNQRMVGAEALIRWIHPERGTV 632 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD--KGINLRVAVNISARQLADQTIFT 511 P++FI AEES LI+ +G WVI Q+A+W + +L +AVN+SA Q Sbjct: 633 SPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKHLMIAVNVSAHQFRALDFVQ 692 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 + +Q + + + +ELTES ++E+ + ++ + LG ++ LDDFGTGYSSLS Sbjct: 693 STQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHALKALGVKLSLDDFGTGYSSLSY 752 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L + P+D +K+DQ FVRD+ P +V+ I+ +A + VIAEGVE+ E L Sbjct: 753 LKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRINVIAEGVETELELDILKGY 812 Query: 632 GINERQGFLFAKPMPAVAFE 651 G QG+LF +P+P + Sbjct: 813 GCRLYQGYLFGRPVPIEQLQ 832 Score = 48.0 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 58/189 (30%), Gaps = 3/189 (1%) Query: 52 ARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLS 111 + T + +M L + V + R A + A + Sbjct: 101 GVVSFATAVAVWWIMPLALKAPSAQSLQVLNQALARSHAELETRVQQRTAELTSALNQSH 160 Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 + + + + I D G NR+ D+ D++ Q + S R SR Sbjct: 161 RLSEALDHIPAFVYIKDINGKYVYANRMTLDFFKCSVDDLV-QIDEGKYFSARTLEKSRS 219 Query: 172 NNRVFFRSGNAYEVELWIPTCKG--QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 ++ G E+ + + + + + + L TDIT + A Sbjct: 220 VDKSVIERGEDACEEIEAVSDDDKKRTFLQIKTPIYENEADRKIWGLCGISTDITALKNA 279 Query: 230 QERLRILAN 238 + LRI A Sbjct: 280 ETSLRIAAT 288 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 192/559 (34%), Positives = 295/559 (52%), Gaps = 6/559 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 VA+ L A +V IV+ ++ G I++ N TG + +G + L Sbjct: 510 VAKKAEEKLLLAAKVFENTVEGIVVTNTEGTIEQVNPGFTVITGYSADEAVGSNPRIL-K 568 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 S R A + + E+W G+ + + Sbjct: 569 SDRHAQHFYQEMWTKLTQDGHWAGEIWNRRKDGESYPEWLTISAVKNEAGQTTNYVSIFH 628 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH--ADNNKVGVVYLDLDNFKK 279 DITE +R Q+ L A D++TG+PNR + D + A+ K+ +++ DLDNFK Sbjct: 629 DITELKRQQDALEYQAQHDALTGMPNRILLGDRLRMALAQLARSGGKLALLFFDLDNFKT 688 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRIL 338 +ND GH GD+LL D+S + L LAR GGDEFL+L S A +A+R+L Sbjct: 689 INDGLGHGVGDELLVDLSRRLERLLRSGDTLARLGGDEFLILLPEIESVDAASHIATRML 748 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 L+ PF G +E + + S+G+ ++P+ G+++ +I++AD AMY AK GR + FTPE Sbjct: 749 DALKAPFHHGDVEYFVTASIGLTIAPDDGNEAPKLIKNADMAMYRAKSMGRNNYQYFTPE 808 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLD 457 M+ + ++ LRKA+E + + YQP + G + EAL+RW+ E LI P + Sbjct: 809 MDVAAHRRISMEYKLRKAIEAQEFELFYQPLVHIQSGHILGAEALIRWRC-EGKLISPAE 867 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVL 517 FI AEES LI+PLG WV+ Q W+D G +L ++VNIS+RQ + + L++VL Sbjct: 868 FIPLAEESALILPLGDWVLRTAAHQAKLWQDAGHDLTMSVNISSRQFSGADLAVTLREVL 927 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 + + E+TES L+ + A + + + G LDDFGTGYSSLS L R PI Sbjct: 928 LDTELRPGRLYFEITESMLMGDVSKAETTLLNLREAGGTFFLDDFGTGYSSLSYLKRLPI 987 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D +K+D+ F++DI S+++V AIV++A+ LNL+++AEGVE+ + L G Q Sbjct: 988 DGLKIDRSFIKDITDDSDSRAIVAAIVSMARTLNLRIVAEGVETQAQRGLLASMGPIVLQ 1047 Query: 638 GFLFAKPMPAVAFERWYKR 656 G+L ++P+PA FE R Sbjct: 1048 GYLASRPVPAQDFEALLSR 1066 Score = 71.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 36/138 (26%), Gaps = 1/138 (0%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR-GNIQRFNRLCEDYTGLKEHDVIGQS 155 LS A + + + NR D G ++ S Sbjct: 381 RQVQERTAALSASERSFRAFFEMASVGVAQFEGDTRRFIKVNRKFSDLMGYSAAELGTLS 440 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 L A+ + + +E G + G++ Sbjct: 441 PRDLVHPDDWQASEEAMKSLVTKEQKEITLEKRYVRKGGGVFWGLATISPLWDQGEHPES 500 Query: 216 LICSGTDITEERRAQERL 233 + DIT ++A+E+L Sbjct: 501 YLAVVRDITVAKKAEEKL 518 >UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y83_COLP3 Length = 1071 Score = 813 bits (2102), Expect = 0.0, Method: Composition-based stats. Identities = 193/611 (31%), Positives = 326/611 (53%), Gaps = 9/611 (1%) Query: 54 IREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA 113 +R + + ++T E + + + K E + A++ A + Sbjct: 453 VRRIVAKIKYISTAMTTMEVEHKFNQPLKVKGKDEISDMVIAFNQMLAERIKSEGEQRIS 512 Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN 173 V A AI+I ++ I+ N +G +V+G+S L + + ++ Sbjct: 513 AAVFKYASEAIMITNAENRIETVNPAFCHISGFSIEEVLGKSPNILNSGKHDNHFYQKMW 572 Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + N+++ E+W G+ F V K + I +DIT+ ++ +E + Sbjct: 573 QS-LEQDNSWQGEIWNKRKNGEIYPEFLAISVVRDQDKKPLQYISLFSDITKHKKYEEDI 631 Query: 234 RILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQ 291 + AN DS+TGLPNR + + + + A++++V ++++DLD FK VND +GH GD+ Sbjct: 632 WLQANYDSLTGLPNRGLCVERLHNKLKGDKAEDSEVALLFIDLDRFKFVNDTWGHSSGDE 691 Query: 292 LLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRI-GL 349 LL+ ++ + +C+ +AR GGDEF+VL S A+E + ILT L +PF + Sbjct: 692 LLKLAAIRLRNCIREKDTVARFGGDEFVVLLVGLSNRFAIERVVKNILTSLSMPFHLRNN 751 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWL 409 E S S+G+ + P G + ++++ADTAMY AK GR F FT MN+ V + + Sbjct: 752 NEAVVSASIGVTIGPVDGDNVELLLKNADTAMYQAKAAGRNTFQFFTKSMNETVSRRMHI 811 Query: 410 DTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 + LR+A++ + V+HYQP ++ GE+ EAL+RWQ P++GLI P FI AEE+GLI Sbjct: 812 EQALRQAIKRQEFVLHYQPVVSLDTGEIIGAEALIRWQHPDKGLIYPDSFIEIAEEAGLI 871 Query: 469 VPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT---IFTALKQVLQELNFEYC 525 P+G+WVI + W D G+ ++VAVN+S+RQ + I +K+ L+ N Sbjct: 872 EPIGQWVIEQACTDLRYWHDLGLKIQVAVNVSSRQCKQTSQTPIKDIIKKALKVNNISPS 931 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 + VE+TES L++N E ++ +Q LG +++DDFGTGYSSLS L FPID +K+D+ Sbjct: 932 SLKVEITESSLMDNSEEMMTTLQDIRSLGVAIYMDDFGTGYSSLSYLKHFPIDVMKIDRS 991 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 F+ SLV A+V + +L+L+++ EG+E+ + +L G + QG+ +KP+ Sbjct: 992 FIAGSIDDKTDASLVEAVVLIGHSLSLKLVGEGIETKQHYDYLRSLGCDYGQGYFISKPI 1051 Query: 646 PAVAFERWYKR 656 + A ++ Sbjct: 1052 ASKALITLCQQ 1062 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 812 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 172/555 (30%), Positives = 293/555 (52%), Gaps = 6/555 (1%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 L E+V A I I D G + N TG +VIG++ L S Sbjct: 394 RAEQRLRLYEKVFENALEGISITDKSGVMVAVNPAFTTITGFTSEEVIGKNPRVL-KSDM 452 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 ++ ++ E+W G+ + + DI+ Sbjct: 453 HGEEFYGEMWTTLKARGSWHGEIWNRRKNGESYPEILSISSIRDDDGEIANYVAVFHDIS 512 Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVND 282 + + +E+L D +TGLPNR + D + A++HA+ KV V++LDLDNFKK+ND Sbjct: 513 DMKHKEEQLAHHLYHDGLTGLPNRVLVLDRLSMALSHANRTGTKVAVLFLDLDNFKKIND 572 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRL 341 ++GH GD LL+ V+ +++ + +AR GGDEFLV+ + + + +A + Sbjct: 573 SFGHAQGDTLLKAVAERLVALYRDEDTVARQGGDEFLVVVVDVHEEREVVDLAEGLQRVF 632 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 PF I EV+ + S+G+ L P+ G D +++++AD AMY +K GR + +FT +M++ Sbjct: 633 EEPFVIKGQEVFITPSIGVTLYPDDGQDPASLVKNADMAMYQSKAKGRNSYFLFTQQMSE 692 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFIS 460 R+ + L L++++R+AL+ + +++QPK+ GEV LEALVRW P+ ++ P DFI Sbjct: 693 RIAQRLTLESDMRRALKEREFTVYFQPKVDLASGEVSGLEALVRWVKPDGIIVSPEDFIP 752 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQE 519 AEE+GLIVPLG +V+ + + + G + L VAVN+S Q + + + L+ Sbjct: 753 MAEETGLIVPLGEFVLDASCKAMQVLQGVGCSALTVAVNLSPIQFGQEDLVEMVVANLER 812 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 +++E+TES L+ + + +++ + + +LG + +DDFGTGYSSL L FPI Sbjct: 813 NGLPASRLELEITESTLMTDVQSSVAQLNRLVELGITISIDDFGTGYSSLYYLKNFPIST 872 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ F+RDI +V +V +A+ + + V+AEGVE+ ++ L G QG+ Sbjct: 873 LKIDRSFIRDITIDDSDAKIVETVVLMARTMGIGVVAEGVETKEQLDLLATFGCATVQGY 932 Query: 640 LFAKPMPAVAFERWY 654 +++P+P + Sbjct: 933 YYSRPLPLEKIIEFL 947 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 176/565 (31%), Positives = 278/565 (49%), Gaps = 13/565 (2%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 + R + H L A + +AI++ D I R N+ TG + IGQ+ L Sbjct: 157 SERRRMEHDLRIAAIAFE-SQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAIGQTPGML- 214 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 S R+ A ++ E+W G+ + + + Sbjct: 215 KSGRQDADFYAAMWCSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTHYVSTF 274 Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFK 278 +DI+ + A+ + LA D +T +PNR + + +D A A + ++ +D+D+FK Sbjct: 275 SDISNLKVAESEIHHLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGALLIIDIDHFK 334 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA------LEA 332 +ND GH GD LL +V+ + +C+ AR GGDEF+V+ E Sbjct: 335 TLNDTLGHDVGDHLLVEVARRLSACIREGDTAARQGGDEFVVMLEELGSEQEGAAVQAEI 394 Query: 333 MASRILTRLRLPFRIGL-IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A +I L P+ + E + S S+GI+L +++ AD A+Y AK+ GR Sbjct: 395 VAEKIRLELARPYLLNGDTEYFRSASIGISLFFGQEKTIDILLKQADIALYKAKDAGRNA 454 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERG 451 F M + E L+ LR+AL D+ V++ QP++ + EAL+RWQ P R Sbjct: 455 IRFFDTAMQTTLDERAELEAGLRRALVRDEFVLYVQPQVDAVRRLIGAEALLRWQPPGRA 514 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG--INLRVAVNISARQLADQTI 509 ++ P DFI AEE+GLIVP+G WV+ ++ +W D +L ++VN+SARQ Sbjct: 515 MVAPNDFIPLAEETGLIVPIGIWVLDQACAELRRWADDPRSASLFLSVNVSARQFRQADF 574 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 + L + +ELTES L++N E + +Q +G + LDDFGTGY+SL Sbjct: 575 VAQVADALARHGANPRLLKLELTESLLLDNVEEVIEKMQALRTIGVRFSLDDFGTGYASL 634 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L RFP + +K+D+ F+RDI+ P ++VRAI+A+ L L V+AEGVE + A+L Sbjct: 635 SYLKRFPFEQLKVDRSFIRDININPDDAAIVRAIIAMGNTLRLSVVAEGVEDDLQHAYLV 694 Query: 630 KNGINERQGFLFAKPMPAVAFERWY 654 K+ + QG+LF +PM F Sbjct: 695 KHECSLFQGYLFGRPMSFDDFRASL 719 Score = 84.9 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 44/142 (30%), Gaps = 23/142 (16%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA--- 168 + A AI++ + G I FNR + G +V+G+ LF E +A Sbjct: 30 LQLSIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACAR 89 Query: 169 ----------------SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 ++ R + G L + V + Sbjct: 90 LYSCEPDGTPPAGFGVFISRLKLKIRDEADW----TYVRKDGSHLPVSLAVSVLRDAKGG 145 Query: 213 EIFLICSGTDITEERRAQERLR 234 + +DI+E RR + LR Sbjct: 146 VQGYLGIASDISERRRMEHDLR 167 >UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1U8_SHEAM Length = 1069 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 203/614 (33%), Positives = 317/614 (51%), Gaps = 14/614 (2%) Query: 60 ITSSLMMSLTVDESDLS-------VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF 112 IT+S M + SD+ + L + E A A A + + L Sbjct: 447 ITASFMGKIESIASDMQKMADDPKLELTIKTKGSDEIAAMAEAMNKMLKERKKYRQALVR 506 Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 A V + I++ D+ +I+ N TG +V G++ L S R Sbjct: 507 AAAVFEYSAEGIMVTDADNHIELINPAFSQITGYSIEEVKGRNPSIL-SSHRNPPHLYDA 565 Query: 173 NRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQER 232 RS +E E+W G+ + + + I DI+ ++ ++ Sbjct: 566 MWESLRSTGKWEGEIWNRRKDGEVYPEYLAITLVRDDEGQIVHHIGLFMDISRRKQYEQD 625 Query: 233 LRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGD 290 + AN D++T LPNR + + + H + A D K+ V+ LDLD FK +ND GH GD Sbjct: 626 IWYKANFDTLTDLPNRKLLSERLGHELKMAEHDGRKLAVMVLDLDRFKYINDTQGHDCGD 685 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGL 349 LL+ V+ + + + +AR GGDEF+++ +Q A+E A R+L + PF++ Sbjct: 686 LLLKAVAKRLQTVMGSTDFIARLGGDEFVIVLPRLAQEHAVEQYAKRLLQSMGDPFKVEQ 745 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWL 409 + S S+GI L P+ G D ++ +A+TAMY AK+ GR F FT EMN + E L + Sbjct: 746 GSMSVSASLGIGLYPQDGLDVETLLSNAETAMYGAKDEGRNHFKYFTQEMNLALIERLGM 805 Query: 410 DTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 + +LR+A+ ND+ + YQP + GEV SLEAL+RWQ PE+GL+ P+ FI AE+ GL+ Sbjct: 806 ERDLRRAVANDEFCLFYQPVVDMESGEVTSLEALLRWQDPEQGLVSPVRFIPVAEDMGLM 865 Query: 469 VPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLA--DQTIFTALKQVLQELNFEYCP 526 LG+WV+ + +A+ G L +A+N+SA Q Q++ L+ L Sbjct: 866 GELGQWVMDKALADLARLHTLGFGLSMAINVSACQCHCKRQSLDEQLRSALSRHGIAPRH 925 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 + VE+TES L++N L + LG ++LDDFGTGYSSLS L +FPI AIK+D+ F Sbjct: 926 LHVEITESLLLDNSHHCLDTLNNIRDLGCAIYLDDFGTGYSSLSYLKKFPISAIKIDKSF 985 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 V + SLVRAIV ++++L ++++AEG+ES + AFL G QG+L+++P+P Sbjct: 986 VEQLPGCESDASLVRAIVNMSKSLGMKLVAEGIESKDQQAFLQALGSQFGQGYLYSRPLP 1045 Query: 647 AVAFERWYKRYLKR 660 W +R+ Sbjct: 1046 FEELLPWLERHQHS 1059 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 810 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 180/556 (32%), Positives = 300/556 (53%), Gaps = 7/556 (1%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + + LS A ++ + + +VI D NI N TG + +VIG++ L S Sbjct: 261 RKMVETQLSLASKIFNNSQEGMVITDRNANIIDVNTAFTQITGYRSEEVIGKNPRIL-RS 319 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 + + ++ E G + I IC D Sbjct: 320 GHHDQGFYKQLWHQLETKGQWKGEFINRKKDGSIYPQLATISAVMDDKNHLINYICVFED 379 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKV 280 I+ + +E+L+ +A D +T LPNR + L++ I H + ++LD+D+FK + Sbjct: 380 ISVRKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHIETGHKNQQTFATLFLDIDHFKHI 439 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILT 339 ND+ GH GDQLL +++ + L + +AR GGDEF+++ + S AL IL+ Sbjct: 440 NDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDEFVIILPDVHSDVALLETVGDILS 499 Query: 340 RLRLPFRIGLIE-VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 + PF + + + S S+GIAL P G DS ++++ADTAMY AK+ GR + ++P+ Sbjct: 500 VFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLLKNADTAMYLAKKNGRNGYAFYSPD 559 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLD 457 + + ++ + + L +A+E QL + +QP+ + +E L+RWQ PE GL+PP D Sbjct: 560 LTDKSVSHVRIQSALHQAIEKQQLRLEFQPQYNLEQHAIVGVETLLRWQHPEFGLVPPAD 619 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQV 516 FI AE++GLI +G WV+L +Q W ++G+ R+AVN+SA QL L + Sbjct: 620 FIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEFGRIAVNVSALQLQQSNFIQRLSDI 679 Query: 517 LQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576 L + F +D+E+TES L+ + + A++ + Q +LG ++ LDDFGTGYSSLS L P Sbjct: 680 LNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRELGIEISLDDFGTGYSSLSYLKGLP 739 Query: 577 IDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 I+ +K+D+ FV D+ S ++V AI+A+ + L+L+V+AEG+E+ ++ +L + G Sbjct: 740 INKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSLKVVAEGIETQEQADYLFEKGCVYG 799 Query: 637 QGFLFAKPMPAVAFER 652 QG+LF++P+ A R Sbjct: 800 QGYLFSRPVSAEKLFR 815 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 44/144 (30%), Gaps = 2/144 (1%) Query: 92 NASAWHDTPAVARD--LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH 149 + S+ + + L ++ + I I G NR E+ Sbjct: 125 DVSSHYQQERTRHQTAATTPLPTLQEFIDCLEDHIWIKGMDGLYSMTNRSVENAWQKTNS 184 Query: 150 DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS 209 ++IG+ F LF R +N V E +L K + Sbjct: 185 EIIGKDDFALFSHERAEKFIEADNLVVATGTLNIVEECRQIDENNNPTWLETIKSPVRDN 244 Query: 210 GKNEIFLICSGTDITEERRAQERL 233 N I ++ +IT + + +L Sbjct: 245 DGNLIGILGMTRNITRRKMVETQL 268 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 810 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 195/646 (30%), Positives = 320/646 (49%), Gaps = 18/646 (2%) Query: 24 TESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDE-SDLSVHLVGR 82 T + +L + +AE + ++ L + + V+ S++ + Sbjct: 379 TNPNGLLILDREGKV---LFVNPAAEILFGRPKKDLMGQILGLPIIVNNYSEIEILQPTG 435 Query: 83 KINKREWAGNASAWHDTPAVARDL---------SHGLSFAEQVVSEAHSAIVILDSRGNI 133 K+ W + A L L +Q ++ +++I D+ G+I Sbjct: 436 KMVIARIRQVKILWEEKEAFLASLVDVTDLKGAQKQLKILKQATEQSPVSVIITDAEGHI 495 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 + NR E TG +VIG++ +L S + + + SG + E Sbjct: 496 EYVNRKFEKLTGYTRQEVIGKNP-RLLKSGKISQDQYKQLWRTLTSGQEWHGEFHNQKKN 554 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G+ + + I DIT + L AN D++TGLPNR D Sbjct: 555 GELFWESASISPIKNEEGVITHFIAIKEDITRRKAQDRILAYQANYDALTGLPNRFLAID 614 Query: 254 LIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 + AI A+ +V V+++DLD FK VND GH +GD LL+ V+ + CL +A Sbjct: 615 RLKLAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDLLLKQVAERLKKCLRKSDTVA 674 Query: 312 RPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDS 370 R GGDEFL++ N Q + +A +IL+ L PF + E + S S+GI L P+ G D Sbjct: 675 RLGGDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLEEEAFISASIGITLYPDDGDDV 734 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 A++R+ADTAMY K GGR F +T MN+ + ++ L +AL+ ++ + YQP + Sbjct: 735 NALMRNADTAMYLGKRGGRNDFKFYTLGMNETNRTRIIIENLLHQALKKKEIYLVYQPIM 794 Query: 431 TWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 + E V EAL+RW +P+ G + P FI AEE+GLI LG WVI ++V +W+ + Sbjct: 795 ELKTEKVIGAEALLRWNNPQLGQVSPDQFIPIAEETGLINQLGAWVISQACQEVVQWKAQ 854 Query: 490 GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 G + VAVN+S RQ D + + + +++E+TE L+E+ + ++ Q Sbjct: 855 GTPISVAVNLSPRQFRDSKLLKIITDAIAVNGITNHDLELEITEKLLLEDSPGSQGILSQ 914 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 Q+ + +DDFGTGYS+LS L +FP + +K+D+ F+ D+ + LV+ I+A++ Sbjct: 915 LHQMNFPLSIDDFGTGYSALSYLIKFPFNRLKIDRSFITDMTHSQKAMGLVKTIIAMSHG 974 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 LNLQVIAEGVE++++ L G + QG+ F++P+ F + + Sbjct: 975 LNLQVIAEGVETSEQLNSLKSQGCDYAQGYFFSRPLTGEEFRYYLQ 1020 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 27/177 (15%) Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWA---GNASAWHDTPAVARDLSHGLSFAEQVVSE 119 SL SL +++ ++N+ E + SA T R+ L ++S Sbjct: 323 SLEYSLNIEDKKRFFEARIVQLNQTEIIAVIRDISARKHTELALRESEERL---STIIST 379 Query: 120 AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRS 179 + ++ILD G + N E G + D++GQ + + + + Sbjct: 380 NPNGLLILDREGKVLFVNPAAEILFGRPKKDLMGQ-----ILGLPIIVNNYSEIEILQPT 434 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 G + + + L+ + + + S D+T+ + AQ++L+IL Sbjct: 435 GKM----VIARIRQVKILW------------EEKEAFLASLVDVTDLKGAQKQLKIL 475 Score = 43.0 bits (101), Expect = 0.036, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 55/165 (33%), Gaps = 10/165 (6%) Query: 70 VDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS 129 +++S L G+ I + N + + +H + + + ++ Sbjct: 213 LNQSITEKELSGKSIG---YLNNLTDMTEQKNAEEVTTHINQEIQALFDAFPDILFRIND 269 Query: 130 RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWI 189 +G I + + +VIG+S+ ++F +V +E + Sbjct: 270 QGIILDYKLQEQQLLSTAPEEVIGKSIQEVFPEPIGNQLYEGIQQVLLTR-QPLSLEYSL 328 Query: 190 PTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 +R F R + N+ +I DI+ + + LR Sbjct: 329 NIEDKKRFFEARIVQL------NQTEIIAVIRDISARKHTELALR 367 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 172/575 (29%), Positives = 299/575 (52%), Gaps = 8/575 (1%) Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 + E+ G + +++ L+ A V + +V+ D GNI N + TG Sbjct: 348 QGEFVG-VIGMTRNISKHKEVEEQLTLATNVFKNSVEGVVVTDRHGNITDVNGAFFEITG 406 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 +++GQ+ R + A + +G + E+W G Sbjct: 407 YVREELLGQNPRIFSSGRHDKAFFDKLWNALLANGK-WNGEIWNRRKNGTIFPQNITIST 465 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN 265 + + + DI+ ++ + +L LA D +T LPNR + + A Sbjct: 466 IYDEVGDVRYFVAVFADISAQKENEAQLTHLAYFDPLTHLPNRMKFMMQLKQEVRQAKRL 525 Query: 266 --KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 ++ V +D+D FK +ND++GH GD++L +++ + S + VL+R GGDEF+ L S Sbjct: 526 NLQLATVMIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQVGDQDVLSRIGGDEFVALIS 585 Query: 324 NTSQSALEAMA-SRILTRLRLPFRIG-LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 + +A +++ PF + + + S+G++L P G+D+ ++R+AD AM Sbjct: 586 GIDNNEDATVAINQLRQVFEQPFIVSTGDHLRLTASMGVSLYPNDGTDADTLLRNADAAM 645 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLE 440 Y AK GR + +T + Q+ FE+L L + L A+E + L + YQPK+ + E Sbjct: 646 YRAKNDGRNNYAFYTESLTQQSFEHLKLQSALYGAIEQNALYLMYQPKLDLVSRKTVGFE 705 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNI 499 AL+RW P+ GLI P FI AE+ GLI +G WV+ RQ +W +G + R+AVN+ Sbjct: 706 ALLRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLETACRQGMRWLREGKHFGRIAVNV 765 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 + +QL + +K+VL E +++E+TES +++N +LA+ +++ LG ++ + Sbjct: 766 AGQQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVMMQNPDLAIRDLKRLGDLGIELSV 825 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSL+ L + PI +K+DQ FVRDI + ++ +A++A+ AL L +IAEGV Sbjct: 826 DDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHALKLDIIAEGV 885 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 E+ ++ FL +N ++ QG+LF++P + + Sbjct: 886 ETKEQADFLQQNQCDQAQGYLFSRPQLPEDLDAFL 920 Score = 44.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 73/229 (31%), Gaps = 23/229 (10%) Query: 27 SDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLT----------------- 69 + +L S L + Q + R + I S + +SL Sbjct: 144 TSLLFVSELTELVSQSQLIIDTRQHSDWRTCSAIGSVICLSLAWPSGANFGFLCFYHNEA 203 Query: 70 --VDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF--AEQVVSEAHSAIV 125 VD L + + +R+ S A++R + + + I Sbjct: 204 HGVDSKTLQLAKLISDSIQRQLGEILSQHSAAEALSRGAPTCVDTVDLQTFIDSFEEHIW 263 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 + + G NR E + +++G+S +LF A +R+ SG V Sbjct: 264 MKNVAGIYTLCNRSVEKAWEMPRSEIVGKSDVELF-GAEIANIFLEGDRLAIESGMPIIV 322 Query: 186 -ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 E L+L K + +I +I++ + +E+L Sbjct: 323 AECLDGNEAKNHLWLETLKLPTLNPQGEFVGVIGMTRNISKHKEVEEQL 371 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 809 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 181/569 (31%), Positives = 306/569 (53%), Gaps = 13/569 (2%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 ++ + + L A V A +V+ D + +I R N+ D TG + DV+ Sbjct: 338 IYEYNQVGDAMQHMVENLKIAATVFESA-EGMVVTDEKKHILRVNQAFTDITGYQPKDVL 396 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G + + R + + ++ +++ E++ G+ + ++ Sbjct: 397 GHHIKVIRSGRHN-QSFYDELELQLKTQGSWQGEIFNKRKNGEEYLQWTMITAVISDHED 455 Query: 213 EI-FLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGV 269 EI + + DIT+ + A+ +++ LA D +TGLPNR + + ++ A + + + Sbjct: 456 EIINYVITLIDITQRKAAESKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAI 515 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS------ 323 +YLDLD+FK +ND GH GD+ L VS +L C+ +AR GGDEF+++ Sbjct: 516 LYLDLDDFKTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDL 575 Query: 324 NTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 + + + + +IL L P+ I IE +++ S+G+ L +++HAD AMY Sbjct: 576 DIASKRADLLCRKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQ 635 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALV 443 AK GR F PEM +V E+ + ++R AL ++ ++YQP++T G++ EAL+ Sbjct: 636 AKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALI 695 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISA 501 RWQ P++G I P++FI AEE+GLI+PLG WV+ + +A W++ + +L +A+NISA Sbjct: 696 RWQHPKQGTISPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISA 755 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 +Q + + LQ + +ELTES L E+ E ++ + Q + G LDD Sbjct: 756 KQFHQTGFVQQVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDD 815 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSL+ L R P+D +K+D+ FVRD+ + R IV++A+++NL VIAEGVE+ Sbjct: 816 FGTGYSSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVET 875 Query: 622 AKEDAFLTKNGINERQGFLFAKPMPAVAF 650 ++ L G + QG+LF++P+P AF Sbjct: 876 QEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 809 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 187/570 (32%), Positives = 297/570 (52%), Gaps = 10/570 (1%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + + G AS R L A V +++ D I N T Sbjct: 182 RPQRFIGIASDITQQ----RANDESLRQAAAVFDATQEGVLVTDPEQRIVHVNPAFSRIT 237 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G +V+GQ L S R AA ++ + +A+ E+W G+ ++ Sbjct: 238 GYSAEEVLGQHP-TLLKSGRHDAAFYQSLWQALHNRDAWSGEVWNRRKSGEIYPQWQCIR 296 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN 264 V + +DIT +R+Q L LA+ D ++ LPNR + I HA+ + + Sbjct: 297 VIHDEHGRISHYVAVFSDITALKRSQRELDYLAHHDPLSNLPNRLLFTERIAHALERSKS 356 Query: 265 NKV--GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 ++ V+ +DLD+FK +N++ GH GD LL+ V + L LAR GGDEF +L+ Sbjct: 357 EQLRGAVLLIDLDHFKHINESLGHNVGDLLLKSVGERLQQDLPGGCTLARLGGDEFGLLS 416 Query: 323 SNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 + +A +L L PFR+ E+Y S+GI+L P+ ++R+AD+A+ Sbjct: 417 ETCADAPQAAELAQNLLRCLEAPFRLDEHELYIGASIGISLFPDDADSVEQVLRNADSAL 476 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLE 440 + AK GR + + E+ + + L ++LR AL+N +L + YQP G +E Sbjct: 477 FKAKSSGREGYAFYVQELTDYARQRVELASSLRHALDNHELRVFYQPLHDLENGNPVGME 536 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNI 499 ALVRWQ P+RGLIPP +FI AE++G+I P+ WV+ Q+ +W +G LR VAVN+ Sbjct: 537 ALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQMMRWNAEGSALRFVAVNV 596 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 S+R + + + QVL E +++E+TES ++E+ + ALS++ + LG ++ + Sbjct: 597 SSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPDAALSLLTRLRALGVRLAI 656 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSL++L R P+D +KLDQ FVR + ++ RA++A+ +L L V+AEG+ Sbjct: 657 DDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIARAVIALGHSLGLNVLAEGI 716 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMPAVA 649 ES + FL G + QG+ F +P P A Sbjct: 717 ESPAQVDFLRALGCDYGQGYHFGRPAPVTA 746 Score = 44.5 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 52/185 (28%), Gaps = 10/185 (5%) Query: 57 MTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVAR--DLSHGLSFAE 114 +TV+ SL L +S + VG + A A + L A Sbjct: 29 LTVLGLSLAQ-LERLQSLKGLIFVGLTAALLYLVLHRHAQQYRRARLQLTSNEERLRLA- 86 Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 + + D F+ GL +G + + R R + Sbjct: 87 --LDATRDGLWDWDFAAQRVFFSPSYAALLGLTPQ-ALGDT-RDAWAERLHPEDRERVLQ 142 Query: 175 VFFRSGN--AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQER 232 +Y+ + G + + G I +DIT++R E Sbjct: 143 ALALDQQYDSYDNVYRLRHADGTYRWFHSRGRLLRDEGGRPQRFIGIASDITQQRANDES 202 Query: 233 LRILA 237 LR A Sbjct: 203 LRQAA 207 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 167/596 (28%), Positives = 306/596 (51%), Gaps = 8/596 (1%) Query: 71 DESDLSVHLVGRKINKREWAGN--ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD 128 ++ L + +GR I + A + L A V + + I D Sbjct: 119 EQKILWFNCIGRDITSHKETEEELRKAKDQLKITVDQQTEQLKLATAVFKHSSEGVTITD 178 Query: 129 SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW 188 S NI+ N TG E +VIGQ+ L +R + + ++ +E E+W Sbjct: 179 SNNNIRYINDAFTHITGYSEEEVIGQNPSILKSNRH-KPSFYKGVWKSIKTNGMWEGEIW 237 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 G+ + + + + I DI+E + +Q +++ A D++TGLPNR Sbjct: 238 NRRKNGEVFPEWISIKAITDVKGEVVNYIAVFRDISEAKASQRKIQHQAYHDALTGLPNR 297 Query: 249 NAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 + D I AI +++ K + ++++DLDNFK +ND+ G++ GD +L+ + I ++ Sbjct: 298 TLLIDRIRKAIASSNDRKSCIALLFIDLDNFKNINDSLGYVIGDSVLQQAAARIREFIDE 357 Query: 307 DQVLARPGGDEFLVLASNTSQSALEAM-ASRILTRLRLPFRIGLIEVYTSCSVGIALSPE 365 ++R GGDEF+++ + A+ A I+ + + + S+GIAL PE Sbjct: 358 KDTVSRIGGDEFVIMLKDLQDKHDAAVMADTIINLFAQALTVESHQFTITPSIGIALYPE 417 Query: 366 HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIH 425 G +++R+ADTAM AK+ GR ++ +FTP + + + ++ LR+ ++ ++ Sbjct: 418 DGKTPYSLVRNADTAMNKAKQEGRNRYHLFTPGLTESALRRISMENQLRQTASDNGFTVY 477 Query: 426 YQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 YQPK+ + +EAL+RW P+ +I P +FI AEE+GLIVP+G V+ Sbjct: 478 YQPKVNLHDNTIVGMEALIRWIQPDGTIISPAEFIPLAEETGLIVPIGEQVLEAACLDTV 537 Query: 485 KW-RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 + + G NL+V+VN+S RQ + + + ++ +++E+TES ++++ E Sbjct: 538 ELNQRFGTNLKVSVNLSLRQFKQEQLMKNIMDIIAMTAICPSCLELEITESTVMDDIEQT 597 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 +++++ +LG + +DDFGTGYSSLS L P+ +K+DQ FV + Q LV+AI Sbjct: 598 KTILEKMDKLGITLSIDDFGTGYSSLSHLKNMPMHTLKIDQSFVAGLPHNKSDQKLVKAI 657 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 +++A++ +L +AEG+E+ ++ ++ + G QG+ ++ P+P F + LK Sbjct: 658 MSLARSFDLSTVAEGIETPEQYNYMRELGCEVMQGYYYSPPVPLEEFAALIEASLK 713 Score = 66.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 38/118 (32%) Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 + +D+ G N + Y GL +G S+F + ++ N+ Sbjct: 26 IENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIFDFIHPEDKETTAQDFNKWQ 85 Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + G ++ S + ++ C G DIT + +E LR Sbjct: 86 KDPSTNFSYINRQMHLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSHKETEEELR 143 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 196/624 (31%), Positives = 325/624 (52%), Gaps = 19/624 (3%) Query: 47 SAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRK-INKREWAGNASAWHDTPA---V 102 SAE+ E+ + L + + E+ ++L+ I E W PA Sbjct: 34 SAERLFERGEL--VGKDLAVPIHSGETRQDINLIRPSGIGWAELRSAPITWDKQPAFVIC 91 Query: 103 ARDLSH------GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 RD++ GL A+ V +++ DS I R N + TG DV+ Q+ Sbjct: 92 VRDITERKTSDLGLHLADTVFDSTREGLMVTDSAQRIVRINPAFSEITGYSAADVLDQTP 151 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 L R ++A SG ++ E+W + + V Sbjct: 152 ALLRSGRHDSAFYAAMWDSINVSG-HWQGEVWNRRKNSEIYPQLISIDVIRDHTGRVCNY 210 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDL 274 + TD+++ R +Q L LA+ D +T LPNR + + H I A + ++ LDL Sbjct: 211 VAVLTDLSKLRSSQLELDFLAHHDPLTRLPNRLLLLSRLQHGIELAQRDGTHLALLMLDL 270 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAM 333 D FK +ND++GHL GD+LL+ V+ ++ + + R GGDEF VL + + Sbjct: 271 DRFKDINDSFGHLVGDELLQLVATRLVKQVRTIDTVGRFGGDEFSVLMEDVAGAEQAARV 330 Query: 334 ASRILTRLRLPFRIG-LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 A+ I+ L P+ + +EV SVGI++ P++G +++ AD+A+Y AK GRG+F Sbjct: 331 ANDIIRVLSEPYGLSSGVEVRIGASVGISIYPDNGLTPELMLQQADSALYQAKIEGRGRF 390 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG 451 F+ + Q + ++ LR+A+ +L ++YQP++ G + EALVRWQ P G Sbjct: 391 AYFSESLTQAARARIDIEVRLRRAITQGELRVYYQPQVDIPSGRIVGAEALVRWQCPIEG 450 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIF 510 L+PP FI+ AE +GLI + WV+ + +Q +WR G+ L +AVN+SA Q I Sbjct: 451 LVPPARFITIAEATGLIGEIDDWVLRETCQQGQRWRAAGLPTLTLAVNLSAYQFLQGDIS 510 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 + QVL++ + +++ELTES L++ + A+ ++ + LG ++ +DDFGTGYSSL+ Sbjct: 511 QTVAQVLRDTGYPAAFLELELTESALMQREAQAIQMLDRLKALGVRLAIDDFGTGYSSLA 570 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L FP+D +K+D+ F+ DI +V AI+A+A +L L+V+AEGVE+ ++ A+L Sbjct: 571 YLKLFPLDVLKIDKRFIDDIPAHRDDMEIVTAIIAMAHSLRLKVLAEGVENKEQLAYLQT 630 Query: 631 NGINERQGFLFAKPMPAVAFERWY 654 G ++ QG+L ++P+PA FE+ + Sbjct: 631 QGCDQFQGYLTSRPVPAAEFEKLF 654 Score = 48.3 bits (115), Expect = 9e-04, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 24/132 (18%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 ++ L + +++ IV++D RG + N E + +++G+ + S Sbjct: 1 MTENLINFQLILTTISDGIVVVDQRGVVLYANESAERL--FERGELVGKDLAVPIHSGET 58 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 ++ + G R+ + K F+IC DITE Sbjct: 59 RQ------------------DINLIRPSGIGWAELRSAPITWD--KQPAFVICV-RDITE 97 Query: 226 ERRAQERLRILA 237 + + L LA Sbjct: 98 RKTSDLGL-HLA 108 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 183/582 (31%), Positives = 284/582 (48%), Gaps = 15/582 (2%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 W G S + L V ++ +IVI D RG I+ N + E Sbjct: 455 DDGSVLWHGFVSD----VTAHKQAEESLITLSAAVEQSPVSIVISDPRGLIEYVNPMFEQ 510 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 +G + +V+GQ+ L S ++ R +G+ + E G + Sbjct: 511 VSGYRRAEVMGQNPRIL-SSHEKSEDEYREMWATLLAGDIWHGEFHSRRKDGSLFWEQAA 569 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN-- 260 I + DIT+ + A+ + LA D +TGLPNR + D + + Sbjct: 570 IAPIFDDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLAVG 629 Query: 261 HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV 320 ++++DLDNFK +ND GH GD LL+ V+ + C+ +AR GGD+F+V Sbjct: 630 TRSRRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDFVV 689 Query: 321 LASNTSQSALEA------MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAII 374 + + S+ EA + +IL L P+ G + S SVG+AL ++ Sbjct: 690 MLQDLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVALFNASQDTVEELL 749 Query: 375 RHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG 434 + AD A+Y AK+ GR F P+M + ++ ++R L+ +Q +++YQP++ G Sbjct: 750 KRADLALYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRLGLQENQFLLYYQPQVNHAG 809 Query: 435 EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-- 492 + +EALVRWQ P RGL+ P FI AE++GLI+PLG+WV+ RQ+ WR + Sbjct: 810 RLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHTAQ 869 Query: 493 LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQ 552 L +AVN+SA Q ++ + + L + +ELTES L+++ + ++ + Sbjct: 870 LTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVALKA 929 Query: 553 LGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNL 612 G LDDFGTGYSSLS L R P+D IK+DQ FV D P +LVRA VA+ + L + Sbjct: 930 HGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGLGM 989 Query: 613 QVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 VIAEGVE+ + FL G QG+ F +P+P + Sbjct: 990 MVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAELACFL 1031 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 202/562 (35%), Positives = 309/562 (54%), Gaps = 6/562 (1%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 A+ A R + GL+ +V A A+++ DS I N E TG DV G Sbjct: 81 QAYRQLLATKRQVEAGLALQRLIVDHASEAMMLTDSAQRILSVNSAFEQITGYAGKDVFG 140 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 ++ L + + AS RN F ++E E+W G G Sbjct: 141 KTPTML-SAGHQGLASHRNVWDFVAENGSWEGEIWDRRKDGTIYPKQMRITAICEDGVQL 199 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVY 271 + +DI+E R ERL LA D +T LPNR A+ +D + A N++ ++ Sbjct: 200 SHFVAVFSDISESRAQAERLEYLARHDPLTNLPNRLALDAHLDTLLEGATPGINRLALLI 259 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSAL 330 +DLDNFK +ND+ GH GD+LL +++ + + ++ + L R GGDEF+V+ ++ A+ Sbjct: 260 IDLDNFKTINDSLGHHAGDRLLSELARRLGAQMDLTKRLFRLGGDEFVVVVDQLINEEAV 319 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 + ++ + P I ++ + S+GI+L PE G D+ A+IR+ADTAMY AK GR Sbjct: 320 IELVQQLAGGIGDPCNIDGHVLHCTSSIGISLYPEDGRDAQALIRNADTAMYYAKANGRN 379 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPE 449 FT MN + L L++ L AL +QLV++YQP+I G+V +EALVRW+ P Sbjct: 380 NHKFFTEPMNAAANKRLHLESELWCALAENQLVLYYQPQIDLLSGKVVGVEALVRWRHPL 439 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQT 508 RGLIPP +FI AEE GLI+PLG WV+L RQ +W D GI++ +AVNISA Q Sbjct: 440 RGLIPPAEFIPVAEECGLILPLGHWVLLTACRQAREWLDAGIDMGEMAVNISAHQFRQPE 499 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 ++++ +L E +++E+TES ++ + A+ + Q +G ++ +DDFGTGYSS Sbjct: 500 FISSVQAILAETGLPTGRLELEITESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGYSS 559 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 L+ L RFP+D +K+D+ F+ D+ P + SLV +IV + ++L LQ++AEGVE+ + FL Sbjct: 560 LAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAEFL 619 Query: 629 TKNGINERQGFLFAKPMPAVAF 650 QGF F +P+ A Sbjct: 620 RTLECERVQGFHFYQPVCAEEV 641 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 175/569 (30%), Positives = 301/569 (52%), Gaps = 12/569 (2%) Query: 99 TPAVARDLSHG------LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 +ARD++ L A V ++I D I NR + TG E + + Sbjct: 664 MLTIARDITERHLMQEKLQLAATVFENTAEGVLITDIDQRISAVNRAFSEITGYSEIEAL 723 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 GQ+ L + ++A G ++ E++ G+ + S + Sbjct: 724 GQTPRLLASGQHDSAFYLAMWHQLTAEG-HWQGEIYNKRKNGELYPSWLTISAVRNSDRE 782 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVV 270 + DI+ + AQ +L A+ D +TGLPNR ++ + + A N + V+ Sbjct: 783 ITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVL 842 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSA 329 +LDLD FK +ND+ GH GD LL+ ++ + + +AR GGDEF++L S Sbjct: 843 FLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSD 902 Query: 330 LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 +A+++L PF+ G E +TS S+GI+L P+ G+D + +IR+AD AMY +K GR Sbjct: 903 ASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGR 962 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSP 448 + +T ++ + E + L+ LR+A+E +++ + +QPK++ + + + EAL+RW P Sbjct: 963 NRVEAYTRDLTAQASERIALEHELRRAVERNEMSLCFQPKLSLKTQSLVGAEALIRWSHP 1022 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQ 507 G +PP FI AEE+G I+ LG WV+ RQ+ W+ +++N++ QL Sbjct: 1023 TFGEVPPEHFIHLAEENGTILQLGDWVLEQACRQMQAWKQHYQPFGPLSINLAGAQLRHP 1082 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 + ++Q+L+ + + +E+TE+ ++ E AL+V+ Q +LG Q+ +DDFGTGYS Sbjct: 1083 HLARRIEQLLKHHQLKAGDLQLEITENFIMSQAEEALAVLYQLKKLGVQLAIDDFGTGYS 1142 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SLS L R P+D +K+D+ F+R + P ++ RAI+A+ +++ L +IAEGVE+ + F Sbjct: 1143 SLSYLKRLPLDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVENQAQQRF 1202 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYKR 656 L G + QG++ + P+P F + R Sbjct: 1203 LAAEGCEQIQGYIVSLPLPPEEFAAAFLR 1231 Score = 74.2 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 21/174 (12%) Query: 78 HLVGRKINKREWAGNASAWHDT------------PAVARDLSHGLSFAEQ----VVSEAH 121 + V R + W N + + + + L +EQ V + Sbjct: 388 YRVIRADGQPLWVRNIVSMIEHGHQPVMRGLMIDISETKRTEDALRLSEQKFASVFQQCP 447 Query: 122 SAIVILD-SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 ++I S G + N E+ GL VIG++ L + E + R G Sbjct: 448 DILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDLWGVEGSGPLLLER--LHQG 505 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 +E+ GQ + G L+ + DI++ + Q++L+ Sbjct: 506 GIRNLEMSFRRSNGQLFTGLTSAETFELDGTPA--LVVAVRDISQLKETQQQLQ 557 Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 45/156 (28%), Gaps = 4/156 (2%) Query: 84 INKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD-SRGNIQRFNRLCED 142 + L + + +++ S G + N Sbjct: 534 DGTPALVVAVRDISQLKETQQQLQTSEEKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCR 593 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 TG + I Q+ L + + +R R G + I GQ + Sbjct: 594 LTGYDLNPTIDQTSLDLGIWV-DLNERKRLVDQLNRDGFVRDFTCHIRRSDGQIRLCELS 652 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 +G + ++ DITE QE+L++ A Sbjct: 653 ARPLPITGVDC--MLTIARDITERHLMQEKLQLAAT 686 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 807 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 192/559 (34%), Positives = 312/559 (55%), Gaps = 6/559 (1%) Query: 108 HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAA 167 L A S + I+I D R I NR + +G ++IG++ L S + Sbjct: 321 EQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIGKNPSIL-RSEHHSN 379 Query: 168 ASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNK-FVHSGSGKNEIFLICSGTDITEE 226 ++ ++ E+W G+ + + N VH + + DI+ Sbjct: 380 EFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINAVHDPNTDALTHFVSVIADISNI 439 Query: 227 RRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVY-LDLDNFKKVNDAYG 285 + ++E+L LA+ D++T LPNR +DHA+ H + ++ V++ LDLD FK +ND+ G Sbjct: 440 KASEEKLSHLAHHDALTNLPNRLLFSARLDHALTHREASEKIVMFHLDLDRFKHINDSLG 499 Query: 286 HLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLP 344 H +GDQLL V+ + L LAR GGDEF +L S E++A R++ + P Sbjct: 500 HKYGDQLLLQVTERLKGVLSDKDTLARVGGDEFAILVEELEHVSDAESIADRLVEAMEQP 559 Query: 345 FRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVF 404 F + + +T+ S+G+AL+P+HG D + +HAD A+ AK+ GR F F PE+++ V Sbjct: 560 FTLDGKDYFTTASIGLALAPDHGDDIDTLTKHADIALNQAKDSGRNNFAFFQPELSETVQ 619 Query: 405 EYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAE 463 E++ L+ LRKAL +Q +HYQP++ G + EAL+RW PE G+IPP F+ AE Sbjct: 620 EWIKLEPELRKALAENQFQLHYQPQVDSTGTAIVGAEALIRWHHPEMGIIPPNQFLPIAE 679 Query: 464 ESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNF 522 E GL+ +G WV+ + Q++ WR +G+ R+A+N++ Q+ Q + + Q L+ Sbjct: 680 EIGLMNKIGEWVMNTALEQLSFWRSRGLIGFRLAINLAGDQITKQNLPMVVMQALEHFQI 739 Query: 523 EYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKL 582 +++E+ E+ L+E++E A S +Q +LG + LDDFGTGYS+LS L + PI +K+ Sbjct: 740 PAEMLELEILETFLMEHEEEATSTFKQLRELGVHLSLDDFGTGYSALSYLKKLPITKVKI 799 Query: 583 DQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFA 642 DQ VRDI + P +++ +A++ +A L+L V AEGVE+ + FL ++ QG+LF+ Sbjct: 800 DQSLVRDIPEDPNDEAIAKAVILLAHTLDLTVCAEGVETRAQREFLESENCDQLQGYLFS 859 Query: 643 KPMPAVAFERWYKRYLKRA 661 KP+ A AF K++ K A Sbjct: 860 KPIEANAFTNLLKKHNKLA 878 Score = 41.8 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 63/220 (28%), Gaps = 28/220 (12%) Query: 37 TTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKRE-------- 88 T E +R QL I + + + + D +++ R+ Sbjct: 116 TAEDNRWDQLRP-----IAQQLDLRACWSYPIRTDADEIAGSFAISSFTPRQPTPFHAQL 170 Query: 89 ---WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI---LDSR--GNIQRFNRLC 140 A A + + +L H E + +V LD + Sbjct: 171 LEAAANIAGIVLNRFSSQENLQHKERLLENITQAMP-GVVYQYHLDDELKQSFTYIGPGI 229 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA---YEVELWIPTCKGQRL 197 E +G+ I F F + +G + E + GQ Sbjct: 230 ETISGITAEAAI--EDFSEFWEQVHPDDRSGLWASIVHTGKHGLAWSHEFRVFHKNGQMH 287 Query: 198 FLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 ++ + + + DIT E+ + E+LR LA Sbjct: 288 WVRGSALPSKLGSQEGLLWNGIILDITPEKASIEQLR-LA 326 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 807 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 207/575 (36%), Positives = 315/575 (54%), Gaps = 10/575 (1%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL--D--SRGNIQRFNRLCEDYTG 145 AG + L ++ + E+ + IVI D + NR TG Sbjct: 314 AGRVYENRSLYLQLESRARKLQLYDRAIEESSNGIVICLADKTRDNPVIYANRAFSIMTG 373 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 ++IG S L + R R R G + L G + Sbjct: 374 YSHDEIIGLSPRFLLANDLAQPGLER-LRNCMRHGGSARAILRNYRKDGSLFWNEVALAA 432 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--D 263 I D+T+ +R + L AN D +TGLPNRN ++D ++HAI A + Sbjct: 433 VHNEHGEIAHFISVFNDVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAITKATRE 492 Query: 264 NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 + K+ V+ LDLD FK+VND GH GD L++ V+ + C+ +AR GGDEF++L++ Sbjct: 493 HTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEFMILST 552 Query: 324 NT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 + + A +A ++L + R I E+ S S+GIA+ P+ G + + R+ADTAMY Sbjct: 553 DIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNADTAMY 612 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEA 441 AK+ GR F ++ EMN R+ E L+L+ +LR A+ QL + YQPK+ G V+S EA Sbjct: 613 RAKDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSVKSAEA 672 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNIS 500 L+RW+ P+ G+I P DFI AEE+GLI+P+G WVI + RQ+AKWRD+ ++RVA+NIS Sbjct: 673 LIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRVAINIS 732 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 A QL+ + + Q L L + + +E+TE+ ++ + A+ +Q ++G +V LD Sbjct: 733 AYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGIRVALD 792 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFGTGYSSL+ L RFPID +K+D+ FV DI S ++V+ I+ +A LN+ V+AEGVE Sbjct: 793 DFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVVAEGVE 852 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 + + FL NG +E QG+ F KP+P+ + + Sbjct: 853 TEAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 807 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 192/558 (34%), Positives = 307/558 (55%), Gaps = 9/558 (1%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE-HDVIGQSVFKLFMSRREAAASR 170 + + I D+RG N+ G ++ DV+G++ F F + A Sbjct: 27 LLAALADNSPDLIYAKDTRGRFIFLNKTLMAVMGAQDLQDVLGKTDFD-FNTPDNAQNYY 85 Query: 171 RNNRVFFRSGNAY--EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 ++++ +SG E + G+ +L +KF I L+ G DITE ++ Sbjct: 86 QDDQTVIQSGQPLINREEPVVDRQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDITERKQ 145 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGH 286 ++E+++ LA DS+T LPNR L+ AI A ++ + V+++DLD FK +ND GH Sbjct: 146 SEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGH 205 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPF 345 GDQLL ++ +CL ++ R GGDEF++L S +A +IL+ P Sbjct: 206 DAGDQLLITMANRFRTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPL 265 Query: 346 RIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 + E + S+GI L PE D A++++AD AMY AKE G+ + ++P++ R E Sbjct: 266 DVHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLE 325 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 L L+ NLRKALE + +HYQ K G++ +EALVRWQ PE G I P FI AEE Sbjct: 326 RLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEE 385 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFE 523 +GLIV LGRWV+ Q W+ +G+ + +AVN+SARQ D + + L+E Sbjct: 386 TGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLA 445 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 +++E+TE ++++ E A+ ++ LG ++ +DDFG GYSSL+ + RFPID +K+D Sbjct: 446 PELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVD 505 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 F+RDI +++ AI+A+ + L+L VIAEGVE+ +++ FL + ++ QG+ F+K Sbjct: 506 SSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSK 565 Query: 644 PMPAVAFERWYKRYLKRA 661 P+ F R+ ++ A Sbjct: 566 PVSPEEFTRFMLAHMVEA 583 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 183/565 (32%), Positives = 294/565 (52%), Gaps = 7/565 (1%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 H L V AI+I D+ + N TG +VIG+ Sbjct: 244 LKQQMIEREQAQHRLRLTAGVFENTSEAIIITDAANRVMEVNPAFVRITGYPADEVIGRD 303 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 + R + +++G ++ E+W G+ + + + Sbjct: 304 PGFMKSHRHTHEFYAEMWKKIWQTGQ-WQGEIWDRRHNGEIYPKWLTINAVYDERGHLVN 362 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLD 273 I +DI+ + +ERL LA D +T LPNR Q +DHA+ A+ NKVG++++D Sbjct: 363 CIGIFSDISRLKATEERLEQLAFFDCLTKLPNRAHFQSRLDHALTAANRRQNKVGLIFID 422 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA--LE 331 LD+FK +ND+ GH GDQLL + + I SC+ + +AR GGDEF ++ ++ + +A + Sbjct: 423 LDHFKHINDSMGHNAGDQLLIEAAKRIQSCVREEDTVARMGGDEFTIILADLTDTAKVMT 482 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A IL P + +++ CS+G+A+ P+ ++ +I+HADTAMY AKE GR + Sbjct: 483 NVALTILESFTHPIVLEDKKLFIGCSLGMAIYPDDSGNAALLIKHADTAMYRAKESGRNR 542 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPER 450 + +T EMN + + L++ LR A+++ ++YQPK+ E+ EAL+RW P Sbjct: 543 YSFYTAEMNAQAQSRISLESELRYAIDHKAFELYYQPKVDAHSSEIVGFEALLRWIHPTE 602 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW-RDKGINLRVAVNISARQLADQTI 509 G+I P FI AEESGLI +G V+ + + + R L VA+N+S RQL + Sbjct: 603 GVISPNQFIPIAEESGLIAAIGNQVVEMACQGLQRINRCTPKPLPVAINLSVRQLRQDNL 662 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 Q L E +++E+TES L + E + +++Q QLG ++ +DDFGTGYSSL Sbjct: 663 VNYFSQTLANYGIEAEQLELEVTESFLAKPIEKSAALLQALHQLGYKIAIDDFGTGYSSL 722 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L FPI +K+D+ FV ++ S+++V+AI+++A AL ++AEGVE+A + L Sbjct: 723 SYLKNFPIHTLKIDRSFVMEVAHNQESRTIVQAIISMAHALGYDLVAEGVETAAQVNVLQ 782 Query: 630 KNGINERQGFLFAKPMPAVAFERWY 654 G QGF +A+P P Sbjct: 783 GLGCGIMQGFHYARPAPLHEILEIL 807 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 70/206 (33%), Gaps = 27/206 (13%) Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 DL+VH + +I +E + V L+ E + + A +++D G + Sbjct: 38 DLNVHQIELEIQNQELRESQLRLEKAKQVQ---ESALARFEALFNSAPEGFILIDVSGMV 94 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 N + G K D+I + F F+ + + FF+S +E+ + Sbjct: 95 LECNHTTLEMLGCKREDLI-RKPFSAFVHIEDQPKFYASYPSFFKSTYPKPIEIRLIHK- 152 Query: 194 GQRLFLFRNKFVHSGSGKNEI-------------FLICSGTDITEERRAQERL--RILAN 238 G + F+ +G + + F++ S +I + + L A Sbjct: 153 GSAFKHKDHSFIAELTGCSTLKQDLFKDLYHDNPFILVSIYNINAHKLLERELADAKQAA 212 Query: 239 TDSITGLPNRNAM--QDLIDHAINHA 262 L N + D ++ + Sbjct: 213 -----ELANHALLESHDKLEATVAQR 233 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 806 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 188/572 (32%), Positives = 316/572 (55%), Gaps = 23/572 (4%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + + L QVV ++ +A+++ D +GNI+ N TG +V G++ Sbjct: 493 QDITERKRQENTLRKLSQVVEQSPTAVILTDPQGNIEYANPKFTQITGYSLTEVHGKNP- 551 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 +L S +A R+ +G + E G + + + + Sbjct: 552 RLLKSGETSAEEYRDLWTTITAGREWHGEFHNKRKDGSLFWEHASISPVRNDAGDISHFL 611 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN----------KV 267 DIT+ +R +E+L+ LA D++TGL NR +QD ++ +I A + Sbjct: 612 AIKEDITDRKRYEEQLQHLATHDNLTGLANRALLQDRLEQSILFAKRSGRLVAALLLDLD 671 Query: 268 GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-S 326 FK +ND+ GH FGD+LL+ + + + +AR GGDEF++L + + Sbjct: 672 --------RFKIINDSLGHSFGDRLLQIAADRLRESVRGADTVARLGGDEFVILLAEVAN 723 Query: 327 QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKE 386 + + +A +IL R+ PF+I E+ + S+GI++ P+ G D +IR+AD AMY AKE Sbjct: 724 EEDVGKVAKKILDRITAPFQIADREITVTASLGISIYPQDGEDEETLIRNADIAMYQAKE 783 Query: 387 GGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRW 445 G F ++ PEMN V E + ++T+LR+AL+ +L++HYQPKI G++ EALVRW Sbjct: 784 EG-NAFRLYAPEMNIVVHEAMEMETDLRRALDRGELLLHYQPKIDLDSGKITGAEALVRW 842 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQL 504 Q P RG+I P FI AEE+GLI+P+G WV+ ++ Q+ W+ +G L +A N+SARQ Sbjct: 843 QHPVRGMIAPGMFIPLAEETGLILPIGEWVLENICLQIKSWQTQGFPLVPIAANLSARQF 902 Query: 505 ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGT 564 + + ++++LQ+ +++ELTES ++ N + A +Q+ + LG + LDDFGT Sbjct: 903 RNDELIATIQRILQDTGLPPHLLELELTESMIMRNVQTAAETMQELNALGVSLALDDFGT 962 Query: 565 GYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE 624 GYSSL+ L RFP+D +K+D+ F+ D+ P + ++ +I+A+A +L LQ +AEGVE+ ++ Sbjct: 963 GYSSLNYLRRFPVDCLKIDRSFISDVADDPSAAAVATSIIAIAHSLGLQAVAEGVETEEQ 1022 Query: 625 DAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 FL + + QG+L++ P+ F ++ Sbjct: 1023 LEFLRQCACDSYQGYLYSAPLAVEEFTAMLRQ 1054 Score = 84.9 bits (210), Expect = 9e-15, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 56/156 (35%), Gaps = 15/156 (9%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHS-AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 + + + ++ +V++ A +I+ D RG I FNR E G +++G+ Sbjct: 353 FEEQTLASAEIERTSRLLAEVLNAASEVSIIATDPRGIITVFNRGAEKMLGYSAEEMVGR 412 Query: 155 ---SVFKLFMSRREAAASRRNNR-----------VFFRSGNAYEVELWIPTCKGQRLFLF 200 +VF L + +R + +A E + +G+ + + Sbjct: 413 ETPTVFHLASELQTRYTELGADRGTPIKDFADYMAHATTADAEHREWTYTSKQGEHISVS 472 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 + + DITE +R + LR L Sbjct: 473 LVITAMRSPAHGIVGYLGIAQDITERKRQENTLRKL 508 Score = 52.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 47/141 (33%), Gaps = 7/141 (4%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH---DVIG 153 +++ L + + + L+ + N G + G Sbjct: 189 QRRDQISKALQTSEERLRMALKASKQGLYDLNVQSGNMIVNAEYALILGYDPQNFRETNG 248 Query: 154 QSVFKLFMSRREAA-ASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF-RNKFVHSGSGK 211 + ++ R A A RN + E T GQ ++ K V + Sbjct: 249 DWIARMHPEDRSAVLAVYRNY--LAGKTEEFRAEFRQRTRCGQWKWVLSMGKIVERDTHG 306 Query: 212 NEIFLICSGTDITEERRAQER 232 + ++ + +DITE R+++E+ Sbjct: 307 QPLRMLGTFSDITERRQSEEQ 327 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 806 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 201/622 (32%), Positives = 316/622 (50%), Gaps = 25/622 (4%) Query: 54 IREMTVITSSLMMSLTVDESDLSVHLV-GRKINKREWAGN--ASAWHDTPAV---ARDLS 107 R S+ + L+ ++ L V R++ E SA + Sbjct: 612 RRFGLRACWSMPI-LSSNQQVLGTFAVYSREVRVPEQREMELVSACSHIAGIAIERHHSE 670 Query: 108 HGLSFAEQVVSEAHSAIVIL--DSRG----NIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 L E ++ + ++I DS G I N+ E G +V+G+ L Sbjct: 671 EQLKLLETSIARLNDIVLIAEADSEGKQNPRIIFVNKAFERLMGYTAEEVLGKDPGFL-D 729 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 + + G + EL G+ ++L + + S + Sbjct: 730 GPNTQMEELWRVKALLKQGESVRTELVNYRKNGEEIWLEMDILPIANSAGVFTHWVSVQR 789 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKK 279 DITE + A+ R++ LA D +T LPNR + D ++ A+ ++ +++LDLDNFK Sbjct: 790 DITERKAAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFKT 849 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA------M 333 +ND +GH FGD LL V+ +L+ + +AR GGDEF+V+ N S+ A + Sbjct: 850 LNDTHGHDFGDMLLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQGCNAAQEASLV 909 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALS-PEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 A +IL L PFR+ E Y+SCS+G+AL E +++ AD AMY AK GR F Sbjct: 910 ADKILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAGRNTF 969 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGL 452 F P M + + ++ +LR+AL D++ ++YQP++ +G + EALVRW+ P++GL Sbjct: 970 RFFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQVDSQGSLLGAEALVRWEHPQQGL 1029 Query: 453 IPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIF 510 + P FI AEE+GLI+P+G WV+ Q+ W R + L ++VN+SARQL Sbjct: 1030 LSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHDFI 1089 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 + +L+E + +ELTES L+EN E ++ + +G +DDFGTGYSSL+ Sbjct: 1090 DRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSLA 1149 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L R P+ +K+D+ FVRD+ S+V+ I+A+ L ++V+AEGVES ++ FL K Sbjct: 1150 YLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLEK 1209 Query: 631 NGINERQGFLFAKPMPAVAFER 652 +G E QG+LF +P PA ER Sbjct: 1210 HGCLEYQGYLFGRPQPAEQLER 1231 Score = 78.4 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 50/148 (33%), Gaps = 4/148 (2%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFA-EQV---VSEAHSAIVILDSRGNIQRFNRLCED 142 R A H+ R + L + EQV A + I + G N + Sbjct: 358 RRVRERTQALHEEVRQRRMVEMELQSSQEQVRLTFHSASAGIAMTSVDGQFLLVNPAFCE 417 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 G E ++ L R E A + + + VE T G+ +++ + Sbjct: 418 IVGYSEDELKKMHCRDLNDGRNELDAWKNRQWLLEGKIDRSVVEKRYTTKSGRSVWVRIS 477 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQ 230 + G + LI +I +++R + Sbjct: 478 ASLIKGPDGSPRNLIKVVENIEQQKRQE 505 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 805 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 208/563 (36%), Positives = 309/563 (54%), Gaps = 9/563 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSR---GNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 + L + + + +AI+I + I+ N + TG +VIGQ Sbjct: 467 ERKRADLALRLQSRALDASVNAILITEPSKEGNLIEYVNPAFKRITGYDPQEVIGQDCRL 526 Query: 159 LFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLIC 218 L R+ R + L G + + I Sbjct: 527 LQRDDRDQEGIAA-IRQALAANREVSAVLRNYRKDGALFWNQLYIAPVPDADGQTTHHIA 585 Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDN 276 D+T R QE+L AN DS+T LPNRN ++D + HA+ A + V VV++DLD Sbjct: 586 VINDVTALIRYQEQLEYQANYDSLTRLPNRNLLRDRLQHALIVAQRHHKGVAVVFIDLDG 645 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMAS 335 FK VND+ GH GD+LL V+ + C +AR GGDEF+++ ++T + +L A Sbjct: 646 FKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGDEFVIVMTDTVDEQSLIAWME 705 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 R+ + P + E+Y CS+G +L P+ G D+ +++ AD AMY AK+ GR F + Sbjct: 706 RVRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKKADLAMYRAKDMGRNTFQFY 765 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIP 454 PEMN L L+ LR+AL +++ ++HYQP++ G+V +EALVRW PE GLIP Sbjct: 766 QPEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDIETGQVVGMEALVRWHDPEVGLIP 825 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTAL 513 P FI AEESGLI PL WV+ + RQ W+D+G+ RV+VN+SARQ + I + Sbjct: 826 PSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPARVSVNLSARQFQQRDIAKLV 885 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 QVL+E + +++ELTES ++ N E A+S++ + LG + +DDFGTGYSSLS L Sbjct: 886 MQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHALGIGLAIDDFGTGYSSLSYLK 945 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RFP+D +K+D+ FV DI + +++ AI+A+A +LNLQVIAEGVE++ + FL + Sbjct: 946 RFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQVIAEGVETSTQLDFLKERAC 1005 Query: 634 NERQGFLFAKPMPAVAFERWYKR 656 +E QG+ FAKP+P A +R Sbjct: 1006 DEMQGYFFAKPLPHHAIPGMLQR 1028 Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 43/145 (29%), Gaps = 2/145 (1%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK-EHDV 151 A + + E V+ I D N GL V Sbjct: 335 ADDVTEQINAEAEAQRSNQMLETVIDNIPQRIFWKDKELRYLGCNMAFARDAGLAYPEQV 394 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 IG+ + R A A R + SG G +K + S Sbjct: 395 IGKRDEDM-PWRAFAEALGRQDTDVMLSGVPKMNYETDLVIDGVHRTTVTSKLPFTDSDG 453 Query: 212 NEIFLICSGTDITEERRAQERLRIL 236 I ++ S TDITE +RA LR+ Sbjct: 454 RVIGVLGSYTDITERKRADLALRLQ 478 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 60/219 (27%), Gaps = 16/219 (7%) Query: 20 YWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHL 79 Y RL D L + E L A A +R+ S M V L Sbjct: 145 YTRLGMEVDRLE-AHMEQLRAQEDRALKAALDASMRD-----SRYAMLFLVVTMLAGSGL 198 Query: 80 VGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG-NIQRFNR 138 + RE + VAR L + + + I D N Sbjct: 199 LIYTFGARENVAR-----EKLRVARTLHRSDERFRGLFEQHPVPMYIFDRDTLRFLAVNA 253 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN--AYEVELWIPTCKGQR 196 G E + + +V + A R G G + Sbjct: 254 AAVQQYGYSESEFLAMTVRAIRPHSEVARLETHLQRSDVTPGGPRTMAGVWHHRRKDGSQ 313 Query: 197 LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + + + G+ +F++ D+TE+ A+ + Sbjct: 314 ISADISYHAMTFMGRPALFVLAD--DVTEQINAEAEAQR 350 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 805 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 192/567 (33%), Positives = 299/567 (52%), Gaps = 8/567 (1%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 W D A L+ + ++I D G I N + TG + IG++ Sbjct: 267 WDDVTA-GHALAERQRLHATALESTRDGVLIADLTGRIISVNPAFSEMTGYTAAEAIGRN 325 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 +L S R A + ++ ELW G+ + V Sbjct: 326 P-RLLQSGRHDRAFYQAMWASLTQAGHWQGELWNRRADGEIYPQWATLSVVKDEHGQPTH 384 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLD 273 + TD+++ + +E L LA+ D +T LPNR ++ L+ HA+ A K V+ ++ Sbjct: 385 YLAVFTDLSKLKHREEELEHLAHYDPLTDLPNRLLLRSLLQHALERAQRQGGKSAVLVIN 444 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS-NTSQSALEA 332 LD FK VND+ GH GD+LL V+ + + L H+ V+ R G DEF+ + + + Sbjct: 445 LDQFKNVNDSLGHALGDELLLGVTARLKARLRHEDVVGRLGADEFVAILEASQDAENAGS 504 Query: 333 MASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A +L L PF + E Y S+GI++ P+ G + ++R AD AM+ AK+ G Q Sbjct: 505 IAGDLLAALAPPFVLADGHETYARASIGISVFPQDGKGANDLLRSADVAMHRAKQRGGNQ 564 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPER 450 + +T E+ + L ++T LR+AL +LV+HYQPK+ G + EAL+RWQ P Sbjct: 565 YAFYTGELGHGALQRLEMETALRRALIQGELVLHYQPKLDLASGVIVGGEALLRWQRPGF 624 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTI 509 GL+PP FI AEE+GLIVP+G WVI + RQ+ W + G + VAVN+SARQ A + Sbjct: 625 GLVPPYRFIPLAEETGLIVPIGAWVINETCRQIRAWAEAGQPSVMVAVNVSARQFAGGEL 684 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 L L++ + + +ELTES L+ E A + ++G V LDDFGTGYSSL Sbjct: 685 EAVLATALRKHAVDPRMLGLELTESMLMAAPEQATERLDALRRVGVAVALDDFGTGYSSL 744 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L+RFP+D +K+D+ F+ I P + ++ A++A+A + L+V+AEGVE+ + ++L Sbjct: 745 SYLSRFPVDELKIDRSFITHIVSDPKAANIATAVIALAHRMALKVVAEGVETETQLSYLR 804 Query: 630 KNGINERQGFLFAKPMPAVAFERWYKR 656 KN ++ QG+LF+ P+PA F + Sbjct: 805 KNRCDQIQGYLFSAPVPADEFATLVSQ 831 >UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=A3Q8W6_SHELP Length = 1094 Score = 805 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 204/607 (33%), Positives = 323/607 (53%), Gaps = 13/607 (2%) Query: 62 SSLMMSLTVD-ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 +SLM + + + LSV + GR E A A A + + ++ + LS A V Sbjct: 487 ASLMQRMAQNTQLQLSVPVDGRD----EVAKMAMALNAMLSERQEANRELSLASAVFEYC 542 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 IV+ D I+ N TG +V G+S L S ++ + Sbjct: 543 AEGIVVTDKDNLIEAVNPAFTQITGYTLEEVKGRSPAVL-NSHQQPHHFYEQMWQSLKQY 601 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 ++ E+W GQ + V + I DI+ ++ ++ + +N D Sbjct: 602 GKWQGEIWNKRKNGQIFPEYLAITVVKDDKGRVVQHIGLFLDISNRKKYEQDIWYKSNYD 661 Query: 241 SITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSL 298 ++T LPNR + + A+ V V+++DLD FK +ND YGH GD+LL+ + Sbjct: 662 ALTNLPNRQLYTSRLSQMLQLAEQRCCSVAVLFIDLDRFKYINDIYGHAVGDELLQVAAA 721 Query: 299 AILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCS 357 + + LE +AR GDEF+V+ +T +E A IL L PF I E+ S S Sbjct: 722 RLEALLEQHDFVARLSGDEFVVVMGHTKHQGEIEQRAQNILQHLSSPFGINRNELLISAS 781 Query: 358 VGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKAL 417 VGI+ P +G+ + R+A+TAMY AK+ GR F F+P+MN + + L+ +LR A+ Sbjct: 782 VGISCYPSNGTSVEVLTRNAETAMYQAKQDGRNCFGYFSPDMNNNMLARITLEQSLRSAV 841 Query: 418 ENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVI 476 + +HYQP + GE +LEAL+RW+ P+RGL+PP +FI AEE+GLI P+G WVI Sbjct: 842 LQHEFCLHYQPIVDTSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEETGLIEPIGEWVI 901 Query: 477 LDVVRQVAKWRDKGINLRVAVNISARQLADQT---IFTALKQVLQELNFEYCPIDVELTE 533 +R + + +GI + +A+N+S RQLA L +LQ+ + + +E+TE Sbjct: 902 QQALRDLRQCHSQGIMINMAINVSGRQLAHGDPSHFACMLNGLLQKYDVAPQYVHIEITE 961 Query: 534 SCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQ 593 S L+ + EL+L + LG +++LDDFGTGYSSLS L +FPI IK+D+ FV ++ + Sbjct: 962 SILMADTELSLKALTAIRHLGVEIYLDDFGTGYSSLSYLKQFPISVIKIDKSFVDNMLED 1021 Query: 594 PVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 +L++AI+ + Q+L+++++AEGVES + +FL G + QG+L AKPMP E Sbjct: 1022 RADANLIKAIITMGQSLDMRLVAEGVESEPQRSFLQGLGCDFVQGYLVAKPMPLKELEPL 1081 Query: 654 YKRYLKR 660 +R ++ Sbjct: 1082 LRRIVRE 1088 >UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=Q1LBF7_RALME Length = 839 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 182/565 (32%), Positives = 289/565 (51%), Gaps = 6/565 (1%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 +A H+ R ++ L A++V +++ D G I++ N TG + IG Sbjct: 264 TALHERDEALRRSNYHLRLADRVFESTLDGVMVTDLNGVIEQVNPAFTQLTGYTLDEAIG 323 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 ++ L S R+ + + R+ ++ E+W G+ + Sbjct: 324 RTPRML-SSGRQGPSFYQEMWSQLRAQGHWKGEIWNRRKNGELYLEHLSVSSICNQAGEC 382 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVY 271 +DIT R A+ERL LA D +T LPNR + + AI A VGV++ Sbjct: 383 THYAAIFSDITHRRIAEERLNHLAMHDPLTDLPNRTLFSERLKQAIIRARRASRRVGVLF 442 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SAL 330 LDLD FK +ND GH GD LR +++ + + +AR GGDEF ++ + Sbjct: 443 LDLDRFKMINDTMGHGTGDDALRVIAMRLKHAVRESDTVARLGGDEFTIVVEEIEDIRHV 502 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 +A +L + P V+ + S+GI++ P+ G+D ++ AD AMY AK+ G+ Sbjct: 503 AHIAQVLLDVVGQPIDAAGRSVFVTPSIGISIYPDDGTDQQQLLMQADRAMYEAKQEGKN 562 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPE 449 F F +M E + L+ LR+AL + +HYQP G + S+EAL+RWQ P Sbjct: 563 TFRFFATQMTSSAMESMALECELRRALTRREFRLHYQPIYDLGSGRIVSVEALLRWQHPT 622 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQT 508 RGL+ P FI AEES L+VP+G WV+ + RQ A W G R++VN+SARQ+ + Sbjct: 623 RGLLSPGAFIDVAEESALVVPIGAWVLREACRQGAAWLRSGFEFGRMSVNLSARQIRHEH 682 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + VL + + + +EL ES + + + V+ + ++ G + +DDFGTGYSS Sbjct: 683 FLHDVSDVLSDAGMQPEHLQLELVESMAMTGNGVTELVLGELARRGVGLAIDDFGTGYSS 742 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 + L P+D +K+D+ F+ + ++ +++RAIVA+A+AL L V+AEGVE+ + FL Sbjct: 743 FTYLQTLPVDTVKVDRSFLTAVIERERDGAILRAIVAMARALGLTVVAEGVENIAQLQFL 802 Query: 629 TKNGINERQGFLFAKPMPAVAFERW 653 + G + QGFL A+P PA A Sbjct: 803 REIGCDRAQGFLLARPGPAEALTAL 827 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 184/577 (31%), Positives = 299/577 (51%), Gaps = 4/577 (0%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 +R +A T L +QV + AI+I D++ I + N E + Sbjct: 275 TERAVIALFAARAGTELARHQAEEQLQLIDQVFEGSRDAIIITDAQTRILQVNPAFEAIS 334 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G +E +++G++ +L S + R +S ++ ELW G+ + Sbjct: 335 GYREEELVGRTP-RLLQSGHQGPRFYREMWEALKSRGHWQGELWNRRADGETYPSLLSVS 393 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN 264 + I +DIT + A++ + LA+ D++TGL NR +++ ++ + +A Sbjct: 394 AVTNDNDEVTHYIGIASDITSHKAAEQHIDYLAHYDTLTGLGNRRLLEEELERMLRNARG 453 Query: 265 NK-VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 + + +LDLD FK +ND GH GD+LL +V+ + L R GGDEF +LA Sbjct: 454 GRPFALFFLDLDRFKNINDTLGHESGDRLLEEVADRLRDLAGPQATLCRIGGDEFAILAP 513 Query: 324 NTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 S +A +++ + P+ I + +CSVG+A+ P G+ A+I ADTA++ Sbjct: 514 GLSHRQTAGIARQLVEGISRPYEITERPLVVTCSVGVAVHPRDGTRREALISAADTALHY 573 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEAL 442 K G + P M E L L+ +LR+AL + ++YQP + V EAL Sbjct: 574 VKAHGSNHYQFHEPGMTAAAAERLHLENDLREALLRGEFELYYQPVLDTERLTVCGAEAL 633 Query: 443 VRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISA 501 +RW PE GLIPP FI AEE+GLI P+G WV+ + Q A+WR G+ + V+VN+S Sbjct: 634 LRWHHPEAGLIPPDRFIPLAEETGLIRPIGTWVLREACAQAARWRRLGLTGMTVSVNVSG 693 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 Q + A++Q L+ + +E+TES L+ + +++ +G + LDD Sbjct: 694 EQFWRDELPQAVRQALEAQALAPDALVLEITESVLMHGSANTETRLRELKAMGVGLSLDD 753 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSLS L RFPID +K+D+ FVRD+ + ++L + ++A+ L LQV+AEGVES Sbjct: 754 FGTGYSSLSYLKRFPIDTLKIDKSFVRDMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVES 813 Query: 622 AKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 A+ L + + QG+ F++P+PA A RW +++ Sbjct: 814 AEHLPLLRRARCDRVQGYHFSRPLPARALSRWIQQHQ 850 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 804 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 194/598 (32%), Positives = 305/598 (51%), Gaps = 8/598 (1%) Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVA--RDLSHGLSFAEQVVSEAHSA 123 L + D + +V ++ + W + V + L + ++ + Sbjct: 494 TELEILRQDGQLKIVRMRVVEISWEQETAYLASLTDVTDFKKTEDQLKMFSRACDQSPVS 553 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 IVI DS G+IQ N E+ TG K +VIGQ+ L R SG + Sbjct: 554 IVITDSEGDIQYVNPKFEEITGYKAGEVIGQNPRILKSGYTTEPEYDVLWRQ-ITSGKQW 612 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E G+ + + I DIT+++ +E L AN D++T Sbjct: 613 SGEFHNKKKNGELFWEHASICPMRDEEGYITHFIAVKEDITQQKHNEEILAHQANYDALT 672 Query: 244 GLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 LPNR + D + AI A ++ V V+++DLD+FK +ND GH GD LL++ + + Sbjct: 673 DLPNRTLIFDRLRQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMRLR 732 Query: 302 SCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 C+ + R GGDEFL++ E +A+++L L PF + E + S S+GI Sbjct: 733 GCIRKTDTVGRLGGDEFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASIGI 792 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 A P+ G + + ++R+ADTAMY AK+ GR F FT MN + ++ LR A+ + Sbjct: 793 ASYPQDGKNVSTLVRNADTAMYAAKQEGRNVFAFFTQNMNDEAQSRIIIENQLRHAISRN 852 Query: 421 QLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 +L + YQP I ++ EAL+RW +PE G I P FI+ AEES LIV LG W++ Sbjct: 853 ELSVVYQPFIHLNTSQIVGAEALMRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILSQA 912 Query: 480 VRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 ++VA W +G N L VAVN+S RQL + + + + +++E+TE L+E Sbjct: 913 CQEVANWHQQGNNGLWVAVNMSPRQLRTPNLVNVIIEAIANNGLSSDCLELEITERSLVE 972 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 S+I+Q + L ++ +DDFGTGYSSLS L RFP +K+D+ F+ D+ + + Sbjct: 973 EVPGVQSLIKQLNHLKIRLAIDDFGTGYSSLSYLKRFPFSVLKIDKSFISDLPDDQDAIA 1032 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 LV+ ++ +A L L V+AEG+E+ + FL G + QG+LF+KP+P F + +R Sbjct: 1033 LVKTMITMAHGLGLVVVAEGIETTAQLDFLCNQGCDYGQGYLFSKPLPPAQFRAYLQR 1090 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 54/162 (33%), Gaps = 27/162 (16%) Query: 73 SDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGN 132 + + I E + A R+ L ++S + + +V+++ +G Sbjct: 407 QVTHIISTIKAIENPEI---VNPSITAEAALRESEARLR---TIISTSTNGLVVVNRKGR 460 Query: 133 IQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTC 192 N E G + G+ + +++ EL I Sbjct: 461 ALFINPAAEALFGRPASQLEGELIGIPLVTKEST-------------------ELEILRQ 501 Query: 193 KGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 GQ V S + E + S TD+T+ ++ +++L+ Sbjct: 502 DGQ--LKIVRMRVVEISWEQETAYLASLTDVTDFKKTEDQLK 541 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 185/568 (32%), Positives = 288/568 (50%), Gaps = 6/568 (1%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A A A ++ + +++ D R I NR + TG E + + Sbjct: 485 ALAQFTREAQWQESLARTRLHAAALESTQDGVMVTDLRPRIVSVNRAFTEITGYSETEAV 544 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G S L R E A R G ++ E+ G+ + + Sbjct: 545 GMSPRLLQSGRHEPAFFTRLWNQLLTHGR-WQGEVQNRRKNGELYTQWMSVSTVRDEHDQ 603 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVV 270 + TDIT ++ A++RL+ LA+ D +T LPNR + ++HAI A +V V+ Sbjct: 604 PTHYVSVFTDITPQKEAEQRLQHLAHFDPLTQLPNRLMVLSRLEHAIASAARAERRVAVL 663 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-A 329 ++DLDNFK VND+ GH GD LLR V+ + + + L R GGDEF+++ + + Sbjct: 664 FIDLDNFKTVNDSLGHSAGDDLLRAVADRLGTRTRREDTLGRLGGDEFILMLEHLREPQD 723 Query: 330 LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 +A ++ L PFR+ EVY S+GI+L P+ G + ++R AD AMY AK GR Sbjct: 724 AAQVAQELIGLLETPFRVAGQEVYVQASIGISLYPDDGLEVGELVRDADAAMYQAKRAGR 783 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSP 448 G + +T + L LDT LR+ALEN + V+ YQP + LEALVR P Sbjct: 784 GVYRFYTESLTTAAQSRLALDTRLRRALENKEFVLWYQPLYRLADRCLIGLEALVRLNQP 843 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQ 507 I P +FI EE+G I LG WV + RQ W D+G++ R+A+N+S +++ Sbjct: 844 GLPPIGPAEFIPLLEETGQITTLGAWVTQEACRQGRAWLDEGLDFGRIAINLSPQEIRRG 903 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 +++ L+ +++ELTES L+E E A + + + LG ++ +DDFGTGYS Sbjct: 904 QTDERVREALERSGLPAERLELELTESGLMEQGERAEAFLHRLRALGVRLAIDDFGTGYS 963 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SL+ L RFP+ +K+D+ FVRD+ LV+ +V++ + L + V+AEGVE+ + + Sbjct: 964 SLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQTMVSMGRNLGISVLAEGVETEAQFDY 1023 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYK 655 L G + QG+ F+ P PA W + Sbjct: 1024 LRSLGCDAAQGYFFSPPRPADEARHWLR 1051 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 176/562 (31%), Positives = 289/562 (51%), Gaps = 6/562 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + + L + A V + + + D+ I N TG +V+G++ Sbjct: 253 EDITERKRLEDNMRLAATVFENSGDGLFVTDAENRIIHVNPAFTRITGFTADEVLGRNPR 312 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L R + + V R G ++ E+W G+ ++N V + + Sbjct: 313 LLASGRHDHDFFIQLWTVLLRDGK-WQGEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNFV 371 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLD 275 +DIT ++ +ERL AN D +T LPNR Q+ + AI A N V ++++DLD Sbjct: 372 AVISDITTRKQVEERLSYAANHDPLTRLPNRTLFQERLTRAIARASRNHNLVALLFIDLD 431 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMA 334 FK+VND GHL GD LL+ V+ + SC+ +AR GDEF ++ + + Sbjct: 432 RFKQVNDTMGHLAGDMLLQQVAERLSSCIRQGDTVARLSGDEFTIILEDVQDPRDAAVVG 491 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 ++L L+ P + E + S S+G++L P D +++ AD AMY AK GR Sbjct: 492 HKVLRLLQEPVALTGGEAHISSSIGVSLYPTDAGDPQTLLKLADAAMYRAKHLGRNSCQF 551 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 + +N FE L L+ LR A++ Q ++HYQP G ++EAL+RW+ PE G++ Sbjct: 552 HSEAVNAEAFERLALENALRGAVDQGQFLLHYQPIFDVKSGRAVAVEALLRWRHPEVGVV 611 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTA 512 P F++ AEE+G+IVP+GRWV RQ WRD G ++LR+ +N+S RQL + Sbjct: 612 APNQFLALAEETGMIVPIGRWVFDQACRQAKLWRDAGHVDLRLHINLSPRQLRQPDLIEM 671 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + L+ + +E+ E+C+I+ ++ +F+ LG + +D+FG+GYSS + L Sbjct: 672 VAAALEVSQLPPQALVLEVMETCVIDKAFDPSALFARFAALGVGLAIDEFGSGYSSFAFL 731 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 R P+ +K+ Q FVR++ +V AIVA+A+ L++ V+A G+E+ + FLT G Sbjct: 732 RRLPVTILKVAQSFVRNLSSSEDESEIVTAIVALARGLHMTVVAPGIENKAQLDFLTGFG 791 Query: 633 INERQGFLFAKPMPAVAFERWY 654 ++ QGFL +KP+P + Sbjct: 792 CDKVQGFLLSKPLPGTEMTEFL 813 Score = 72.2 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 48/141 (34%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + A L + + A +V+ D+ G + N G E ++ G+ Sbjct: 130 ERSHAASALKRSEGRFRALFANAGLGVVLADAHGRMVEANPAFLSMVGYGEVELRGEKFR 189 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 + V S + +++ G+ ++ V + + F + Sbjct: 190 DITHPDDIGLNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIWAKLTCTVMREADGQQPFTV 249 Query: 218 CSGTDITEERRAQERLRILAN 238 DITE +R ++ +R+ A Sbjct: 250 TVVEDITERKRLEDNMRLAAT 270 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 804 bits (2077), Expect = 0.0, Method: Composition-based stats. Identities = 189/596 (31%), Positives = 295/596 (49%), Gaps = 19/596 (3%) Query: 69 TVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD 128 + + ++L G+ I A + + + + L A + +A+++ D Sbjct: 363 LFETTKTPLYLDGQAIGTLGIAHDIT-------RRKRIEADLRLAAAAFE-SQTAMLVTD 414 Query: 129 SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW 188 + G I R N+ TG + +GQ+ L R + A ++ RS ++ E+W Sbjct: 415 ANGVILRVNQAFLRDTGYAVEECVGQTPRILRSGRHDPAFYQKMWES-IRSSGVWQGEIW 473 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 G + G I D++E + A+ R+ LA D +TGLPNR Sbjct: 474 DRRKDGSIYPKWLTISAVLGDSGEVTHYIGLHQDVSERKLAESRIHQLAYYDQVTGLPNR 533 Query: 249 NAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 +Q+ + + A +N ++++DLDNFK +ND GH GD LL+ V + C Sbjct: 534 ILLQERLSQVMAKCRASSNYGVLLFVDLDNFKTLNDTLGHNVGDLLLKQVGEVLRRCSRE 593 Query: 307 DQVLARPGGDEFLVLASNTSQS------ALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 +AR GGDEF V+ S EA A +L+ L F++G + + S+G Sbjct: 594 SDTVARLGGDEFAVIMSELGTDPSAAMQGAEAAARYLLSELGRTFQLGNVIHRNTVSIGA 653 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 L +++R D A+Y AK GR F P M + E ++ LR A+E + Sbjct: 654 TLFKGEQESIESLMRQIDLAIYQAKGAGRNTVRFFDPSMEIALRERAAIEEALRYAIEEE 713 Query: 421 QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 Q ++HYQ +I G + E L+RWQ PERG++ P FI AEE+G IV LG WV+ Sbjct: 714 QFLLHYQAQIGEDGRIEGAEVLLRWQHPERGMVSPAIFIPLAEETGDIVLLGSWVLKQAA 773 Query: 481 RQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 Q+A+W + + L +AVN+SA QL + VL+E + + +ELTES L+ Sbjct: 774 AQLARWAESPVMAGLVLAVNVSAVQLRQPDFVEQVTTVLREAGADPGRLKLELTESMLVN 833 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 + E ++ +Q +G LDDFGTGYSSLS L R P+ +K+DQ FVRD+ + Sbjct: 834 DVEATIAKMQSLKAIGIGFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLVDANDVA 893 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 + ++VA+A++L L VIAEGVE+ + L G + QG+LF++P+P FER Sbjct: 894 IASSVVALAKSLGLGVIAEGVETEAQRELLAGIGCHCYQGYLFSRPLPIGDFERLV 949 Score = 75.7 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 2/134 (1%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 R++ S + ++S + + ++ G N+ E G E ++G++ + F + Sbjct: 269 REMKLERSRLQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDYDFF-DK 327 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 A R +R +G E W+ LF I + DI Sbjct: 328 DLADFFREKDRAATAAGRPLSNEEWLEFAADGYSGLFETTKTPLYLDGQAIGTLGIAHDI 387 Query: 224 TEERRAQERLRILA 237 T +R + LR LA Sbjct: 388 TRRKRIEADLR-LA 400 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 802 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 183/577 (31%), Positives = 319/577 (55%), Gaps = 12/577 (2%) Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 R+ A A H+ + LS V+ + +I+I D G I+ N + TG Sbjct: 62 NRQLAAKVKALHERDFKLKKLS-------SAVTNSGCSIIITDRLGRIEFVNNKFVNVTG 114 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 + + G+ + L +A + + +E E+ G + Sbjct: 115 YGQEEARGRFLDILNPKDMDAEKPQEQIWESDILYDGWEGEVLSRRRDGYDFWWAVTVST 174 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--D 263 S + SG D++E + A +++ +A DS+TGL NR D ++ A+ A D Sbjct: 175 VCDSDNTVTNYVISGVDVSELKEANRKMQQMALYDSLTGLANRRLFVDRLEQAVKAASRD 234 Query: 264 NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 ++ +++LDLD FK++ND GH GD LL+ V+ + +C+ +AR GGDEF VL + Sbjct: 235 RKQIALLFLDLDQFKRINDTLGHDAGDSLLQTVAQRLKNCVRAKDTVARLGGDEFTVLLT 294 Query: 324 NTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 + + ++ +A++IL L+ P ++ EV S S+G+ L+P G+++ ++++AD A+Y Sbjct: 295 DIVDTFSVTPVATQILKALKEPIKLKKHEVIVSTSIGVTLAPTDGANADVLMKNADLALY 354 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEA 441 AKE GR ++ +T E+N + L ++ LR AL+ ++ + +QP++ G++ S+EA Sbjct: 355 RAKEHGRDRYHFYTEELNAHALKQLLMEQELRHALQFEEFTLGFQPQVNLTTGKIVSVEA 414 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNIS 500 L+RW P +GL+ P FIS AEE+GLI P+GRWV+ + Q+ +D G +++AVN+S Sbjct: 415 LIRWHHPSKGLVMPDSFISVAEETGLINPIGRWVLKNACMQMKMLQDLTGSAIKIAVNLS 474 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 ARQ D + ++++ L E E +++E+TES L+ + + + +++ Q G + +D Sbjct: 475 ARQFDDPKLEQSIEEALNETGLEPEWLELEVTESMLMGDIQAVTNKLKRLRQTGVSLAID 534 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFG+GYSSLS L + P++A+K+D+ FVRDI + + AI+AVA L L+V+AEGVE Sbjct: 535 DFGSGYSSLSYLKKLPVNALKVDREFVRDIPEDSNDMEITSAIIAVAHKLQLKVVAEGVE 594 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 +A++ +L N + QG+ F+KP+ + + Sbjct: 595 TAEQKEYLLANQCDFAQGYFFSKPLSFEDLYIYLNEH 631 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 190/564 (33%), Positives = 297/564 (52%), Gaps = 7/564 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + + + A V + AI+++D+ I N + TG +V+G++ Sbjct: 306 QDISDRKVAEDKMRLATLVFENSSEAIMVVDAESQILSVNPAFTEMTGYTAQEVVGKTP- 364 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 K+ S ++ S ++ E+W G+ + I + Sbjct: 365 KILASGKQDRKFYEEMWHLLDSNGKWQGEVWNRRKNGESYAEWLTIDTIYNEHGEVIRRV 424 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLD 275 +DIT+ ++ QE + AN D +TGLPNR + D ++ I AD N + V++LDLD Sbjct: 425 ALFSDITKNKQNQEVIWRQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLAVLFLDLD 484 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MA 334 FK+VND YGHL GDQLL++ + +L + +AR GGDEF+V+ S + +A Sbjct: 485 RFKEVNDTYGHLMGDQLLQESAHRLLHSVRECDTVARLGGDEFVVILSGLQDKDVVQDIA 544 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 IL + PF++ + S S+GI + PE G+ + ++AD AMY AK GR ++ Sbjct: 545 QSILKKFDTPFQLDNDLTHVSVSIGITIYPEDGNAGEVLFKNADQAMYVAKNNGRNRYSY 604 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 FT M + L +L AL Q ++YQP + G+V EAL+RWQ P RG+I Sbjct: 605 FTASMQAHAQNRMRLSNDLHLALPGQQFELYYQPIVELATGQVHKAEALLRWQHPTRGMI 664 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTI-FT 511 PP +FI AEE+GLIV +G WV + RQV + + + ++++N S Q ++T Sbjct: 665 PPDNFIPLAEETGLIVDIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFHNETHGHE 724 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 A L + I VE+TE L+ DE + + F G QV LDDFGTGYSSLS Sbjct: 725 AWISFLLMNDLPRQSIVVEITEGLLMHTDESISAQLLGFRDAGVQVALDDFGTGYSSLSY 784 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L +F ID +K+D++FVR++ + +L AIV +A L+++VIAEG+E+ ++ L + Sbjct: 785 LKKFDIDYLKIDRIFVRNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQRELLQQI 844 Query: 632 GINERQGFLFAKPMPAVAFERWYK 655 G + QG+LF+ P+PA AFE + + Sbjct: 845 GCDFGQGYLFSPPLPAPAFEAYLR 868 Score = 50.7 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 47/144 (32%), Gaps = 26/144 (18%) Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 A+ +I++ D +G + N G + + +R+ + + R F Sbjct: 83 HANDSILLFDHQGKLVDANDRALRMYGYTRDQM------QHIHARQLLPDAASDWRSCFL 136 Query: 179 SGNAYEV---ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEE-------RR 228 + + E G + + + G + ++ DITE R Sbjct: 137 AEAQHNGIIFESEHKHADGSTFSVEVSACLLKIGGSD--YIQAIVRDITERLRVVEKLRE 194 Query: 229 AQERLRIL---AN-----TDSITG 244 +++ L + A+ D TG Sbjct: 195 SEQLLAHMSAIAHIGGWEFDVETG 218 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 179/578 (30%), Positives = 317/578 (54%), Gaps = 7/578 (1%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 N + + G D ++ + V ++ + I + D+ G I N T Sbjct: 275 NDKRFVGTVGVIRDITG-SKHAEEMICTLSLAVEQSPAMIAVTDTDGRIDYINPKFCKVT 333 Query: 145 GLKEHDVIGQSVFKLFMSRREAAA-SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNK 203 G + +V+G+++ + E+ + + + S ++ G+ + + Sbjct: 334 GFEPEEVLGKNLIDIIQPGGESLSMADKTLWKAITSKGEWKEAFSSRKKHGELFWTSLSL 393 Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD 263 + + DITE ++A+ER+ LA DS+T LPNR D ++ AI HA Sbjct: 394 SAIKSNEGFISHYLAIMEDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAH 453 Query: 264 NNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL 321 + + V ++D+D FKKVND GH GD+LL+ ++ + SC+ + ++R GGDEF++L Sbjct: 454 RKQQMLAVAFIDIDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLL 513 Query: 322 ASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 + S+ + RIL +L+ P I ++ S S+GIAL P G+ + A++++AD+A Sbjct: 514 LTEISRMEDANDVTQRILKKLKEPVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSA 573 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSL 439 MY +KE GR + ++ + ++ +E L + LR+ALEN +LV++YQP++ G + + Sbjct: 574 MYISKESGRDNYHFYSSTVQEKAYEQLLEEMYLRRALENRELVLYYQPQVNIATGRLVGM 633 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVN 498 EAL+RW+ P++GLI P +FI AE++G IVP+ WV+ +Q W+ G+ + +AVN Sbjct: 634 EALLRWKHPKKGLISPAEFIPLAEDTGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVN 693 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 IS + + + VL + +D+E+TE I+N + + + + LG Q+ Sbjct: 694 ISGHTFGRENLIDFVNNVLHDTRMSPDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQIT 753 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 +DDFGTG+SSLS L++FPI +K+ F+ ++HK P + ++V+A++A+A++L L VIAEG Sbjct: 754 IDDFGTGFSSLSYLSKFPIQKLKIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEG 813 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 VE+ ++ FL +E QG+L +K + + R+ + Sbjct: 814 VETDEQFEFLQGLQCDEFQGYLCSKAVTSEEMGRFLAK 851 Score = 52.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 55/198 (27%), Gaps = 45/198 (22%) Query: 78 HLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFN 137 +L+ KI+ A + + +L G +++V I +D+ G N Sbjct: 105 YLIKGKIDGDSLARTMRYSMERKQIELELQDGKQRYKRLVEILPDIIYRIDANGYFTFIN 164 Query: 138 RLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR---------------------RNNRVF 176 G + ++IG+ +L SR R Sbjct: 165 EA-VQVFGYEPDELIGKHFSELIHPDDLKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTG 223 Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKFV---------------------HSGSGKNEIF 215 R + + + + K + + + + K + Sbjct: 224 QRKTTGLQ--IRVKSKKSPEYMEYTIQIIKWPKKHEKIIEVAATGHYDSDIMKNDKRFVG 281 Query: 216 LICSGTDITEERRAQERL 233 + DIT + A+E + Sbjct: 282 TVGVIRDITGSKHAEEMI 299 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 197/561 (35%), Positives = 308/561 (54%), Gaps = 9/561 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 R L A V A++I D NI N D TG DV G++ +L Sbjct: 333 ERRRHEKELQQAAVVFDAIREAVIITDDARNIVAVNNAFTDITGYTLDDVYGRNP-RLQQ 391 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 S R R+ ++ E+ G+ ++N V N + + Sbjct: 392 SGRHDKTFYRSLWRSITEHGHWQGEIENKRRNGEIYPAWQNINVVYDKNGNVANYVSVFS 451 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 DI+ + +++LR LAN DS+TGLPNR + +++++ A + V ++++DLD FK Sbjct: 452 DISVIKEKEKQLRHLANHDSLTGLPNRLLFFNSLENSLERARRRRMEVALMFIDLDRFKI 511 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRIL 338 +ND GH GD LL+ V+ +L + + ++AR GGDEF + S A A +++ Sbjct: 512 INDTMGHEAGDILLKTVARRLLEAVRGEDMVARLGGDEFTISLEELSNTEDAAAKAGKLI 571 Query: 339 TRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 +R P IG E+ S S+GIA+ P ++ + R AD AMY AKE R F +T E Sbjct: 572 ETIRQPVHIGGHEIVCSASIGIAIFPHDADNAQNLARAADAAMYRAKELHRNTFEFYTSE 631 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLD 457 + +R E+L L + +R+ALE ++ ++YQP+ G + E L+RW+ P RGLI P Sbjct: 632 LTERAIEHLTLSSEMRQALERNEFELYYQPQFNLTSGRLVGAETLLRWRHPTRGLITPYC 691 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQV 516 FI+ AE+S LI P+G WVI + R VA W G+ L R+A N+S++QL + ++ Sbjct: 692 FINIAEDSALIDPIGGWVINQLCRDVAGWLKGGLKLPRIAFNVSSKQLEHYDVKGRIEHA 751 Query: 517 LQELNFEYCPI--DVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 LQ E + ++E+TE L +++E ++ V++Q LG V +DDFGTGYSSLS+L Sbjct: 752 LQRWGLEPSDLDLELEVTEGAL-QHEERSVEVLRQVRLLGLSVAIDDFGTGYSSLSRLKH 810 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 PID +K+D++F+RD+ P +Q+L I+ + +AL L+V+AEGVE+ ++ FL + + Sbjct: 811 MPIDTLKIDRMFIRDLPDDPNNQALASGIILLGRALGLKVVAEGVENVEQLRFLQERNCD 870 Query: 635 ERQGFLFAKPMPAVAFERWYK 655 E QGFL +KP+P AFE+ K Sbjct: 871 EAQGFLLSKPLPKAAFEKMLK 891 Score = 67.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 45/153 (29%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 N + G + + + + A LD RG I N + Sbjct: 193 NPVQMHGTIQDITERKRDENRKNEYAHLIYDLYNNAPCGYHSLDPRGVIVDINETALRWL 252 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G +++G+ +F +S + G +EL I G+ + Sbjct: 253 GYSRSELVGKVMFCDLLSEDCVQLCWDKLGQLKKGGALSNLELNIRCKDGRLFCVLLTST 312 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 C D TE RR ++ L+ A Sbjct: 313 ALQSEDGEFRGSRCILVDYTERRRHEKELQQAA 345 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 172/584 (29%), Positives = 292/584 (50%), Gaps = 11/584 (1%) Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 +E+ L A ++ + + D+ I + N + TG Sbjct: 193 AQEFNAMLDTLQQREQELVQSRDALRIAATAFE-SNDVMFVCDADWRILQVNSAFQRVTG 251 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 + IG++ L S + RS +++ E+W G+ + Sbjct: 252 YLPEEAIGKAPRDLMGSGIQTQEFYEVMNESIRSNGSWQGEVWDRRKNGETYPAWTTITA 311 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--D 263 + + + +D + + A+ ++ L DS+T LPNR + ++ A++ A Sbjct: 312 VRSESGDVTHYVANLSDFSARKAAENEIKTLVYFDSLTMLPNRRMLMGRLETAMHAALST 371 Query: 264 NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 + ++++DLD+FK +ND GH GD LL+ V+ + SC+ +AR GGDEF+V+ Sbjct: 372 GHLGALLFVDLDDFKTLNDTLGHHQGDILLQQVANRLQSCVREADTVARLGGDEFVVMLE 431 Query: 324 NTSQS------ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 S+ EA+A +++ L P+ +G + ++ SVGI + + ++ A Sbjct: 432 GLSKDVAEASTQAEAVAGKVMQALNQPYDLGTLTRSSTPSVGITVFGKQQESLDEPLKRA 491 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVR 437 D AMY AK GR +F P+ V L+ LR ALE +Q V++ QP+I+ V Sbjct: 492 DLAMYQAKAAGRNTSRLFDPKTQAAVTLRADLEAALRTALEEEQFVLYLQPQISEDVRVT 551 Query: 438 SLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRV 495 EAL+RWQ P RGL+ P +FI+ AE+ G+IVP+G WV+ +Q+A W + ++ + Sbjct: 552 GAEALIRWQHPTRGLVMPGEFIAVAEDCGMIVPIGNWVLNTACKQLALWATQPAFAHMTI 611 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 AVN+SA+Q + L + + +E+TES LI N + + +++ G Sbjct: 612 AVNVSAKQFHQHDFVEQVLDALSRHGAQASGLKIEITESMLIANVDDVIVRMEELQHHGV 671 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 +DDFGTGYSSL+ L R P+D +K+DQ FVRD+ ++ IVA+A ++ L VI Sbjct: 672 GFAMDDFGTGYSSLTYLKRLPLDVLKIDQSFVRDVLVDTNDAAIANMIVALANSMGLSVI 731 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 AEGVE+ ++ +L ++G + QG+LF++P+P FE +L+ Sbjct: 732 AEGVETVEQMQYLARHGCHAYQGYLFSRPVPVERFETSLADFLR 775 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 188/613 (30%), Positives = 312/613 (50%), Gaps = 15/613 (2%) Query: 50 QAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDL-SH 108 +A R ++ I+ ++L V L + + E + + R Sbjct: 270 EAIREADLKGISKGRQVTLQVGRGLREFELSVSRKHDDESSEHHFIVLSRDITERKRHER 329 Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 L A + ++I D+ I R N TG + + IG + L + Sbjct: 330 ELHIAATAFD-SQEGMLITDAEHRILRVNNAFTRVTGYEAEEAIGNTPAFLQSGKHSEDF 388 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 + ++ N ++ E+W G+ S + + TDIT+ ++ Sbjct: 389 YQTMMESLSKN-NYWQGEVWNQRKSGEIYPQHLTITAVQTSAGEITNYVGAFTDITQRKQ 447 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGH 286 + + LA DS+TGLPNR ++Q+ +D A++ + + V ++DLDNFK +ND GH Sbjct: 448 DEADIHQLAFYDSLTGLPNRRSLQERLDSALSSCRHTRQLGAVFFIDLDNFKNLNDTAGH 507 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS------RILTR 340 GD+LL +V+ + SC+ + ++AR GGDEF+V+ N +A +++ Sbjct: 508 DQGDKLLVEVANRLNSCVRNADMVARLGGDEFIVILENLGVDESNVLAQVKDIVAKVILT 567 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 ++ P IG + +CS+GIAL E +++ +D AMY AK G+ + F P Sbjct: 568 IQAPLTIGTQAYHPTCSIGIALFSEKDFS-DEVMKRSDMAMYQAKSSGKNTYRFFDPVAE 626 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFIS 460 + + +D +LR AL N QL +HYQP+ + + EAL+RW+ P+RG++ P +FI Sbjct: 627 EALCSLARMDADLRFALSNQQLELHYQPQYRCQT-LIGAEALLRWKHPDRGMVSPAEFIP 685 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKG--INLRVAVNISARQLADQTIFTALKQVLQ 518 AE++GLI+P+G WVI +Q+ +W+++ L +AVN+SARQ +++Q+L Sbjct: 686 LAEDTGLILPIGEWVIRQACKQLQQWQERPETAELFIAVNVSARQFCQDNFVESVRQLLN 745 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 + +ELTES ++ + E + +Q G + LDDFGTGYSSLS L R P+D Sbjct: 746 TYGVSAEKLKLELTESLVLMDVEDTIQKMQALRSYGIRFALDDFGTGYSSLSHLKRLPLD 805 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 IK+D+ F+RD+ + +V+AI+A+ Q L L V+AEGVE+ ++ AFLT+ + QG Sbjct: 806 QIKIDRSFIRDVPEDQDDSEIVQAIIAMGQNLGLNVLAEGVETDEQLAFLTELDCLDIQG 865 Query: 639 FLFAKPMPAVAFE 651 FL +P FE Sbjct: 866 FLLGRPSSIDKFE 878 Score = 53.0 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 48/140 (34%), Gaps = 3/140 (2%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 R +H E S + +D G + D K ++IG+SVF Sbjct: 203 ERTSNHARHRLEATFSAIPDLLFEMDIEGRYLACHASDPDDLVAKPEELIGKSVFDFIP- 261 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 EA R G + ++ + +G R F H +E I D Sbjct: 262 LDEAQIIVEAIREADLKGISKGRQVTLQVGRGLREFELSVSRKHDDE-SSEHHFIVLSRD 320 Query: 223 ITEERRAQERLRILAN-TDS 241 ITE +R + L I A DS Sbjct: 321 ITERKRHERELHIAATAFDS 340 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 186/583 (31%), Positives = 293/583 (50%), Gaps = 13/583 (2%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 +E A LS A + + +VI D +G I R N+ TG Sbjct: 129 KEVEAQRDRLATLVAELERAEGELSIAAVAF-ASQNGMVITDPKGVILRVNQSFTRLTGY 187 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 + IG++ L R + +R G ++ E+W GQ Sbjct: 188 SAAEAIGRTPAVLKSGRHDDPFYQRMWNSLVEKG-YWQGEIWNKRKSGQIYAELLTITAI 246 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK 266 SG + S +DITE+++A+ + LA D++T LPNR +QD + A+ A + Sbjct: 247 VASGGITTHYVASFSDITEDKQAEAEIHRLAYYDALTRLPNRRLLQDRLGQALAAAARHG 306 Query: 267 V--GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN 324 + + ++ LDNFK +ND GH GD LL +V+ + + + +AR GGDEF++L Sbjct: 307 LYGALFFIGLDNFKTLNDTRGHDVGDLLLVEVAQCLRAQVREGDTVARLGGDEFVLLLDG 366 Query: 325 TSQSALEAMA------SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHAD 378 S +A EA A ++ PF + E S+G++L + + AD Sbjct: 367 VSGNADEAAAVAKEVGDKLREATSRPFSLDGQEYRCKLSIGVSLF-AALDTVEELFKRAD 425 Query: 379 TAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRS 438 A+Y AK GR + F P M + L+++L +AL DQL +HYQP+I G V Sbjct: 426 LALYQAKNAGRDRLRFFDPAMQAAMDLRGALESDLHQALALDQLRLHYQPQIDTAGRVIG 485 Query: 439 LEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVA 496 +EAL+RW P+RGL+ P +F+ AE +GLI+P+GRW++ + W +L+VA Sbjct: 486 VEALLRWWHPQRGLVSPNEFVPLAESTGLILPIGRWILETSCVLIKNWESDACTRSLQVA 545 Query: 497 VNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQ 556 VN+SARQ +K+ L+ + +ELTES L++N E ++ + +LG Sbjct: 546 VNVSARQFRQADFVEQVKRSLKASGANPARLKLELTESVLLKNVEDTIAKMLAIKRLGVA 605 Query: 557 VHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIA 616 LDDFGTGYSSLS LA+ P+D +K+DQ FVR + +++ R I+ + + L++ VIA Sbjct: 606 FSLDDFGTGYSSLSYLAQLPLDQLKIDQSFVRKLPGARKEETIARTIITMGRELDMNVIA 665 Query: 617 EGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 EGVES + FL +G + QG+LF++P+P + + + Sbjct: 666 EGVESEAQRQFLEAHGCHAFQGYLFSRPLPVEHLTVFLQEADR 708 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 181/557 (32%), Positives = 296/557 (53%), Gaps = 7/557 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 + L A V A +++ D+ I N TG +V+G++ L Sbjct: 975 ARKRAEEQLRLAALVFDRASEGVMVTDTEQRILTINDSFSTLTGYTRQEVVGKTPRLLRS 1034 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 R R G ++ E+W G+ + + + + + Sbjct: 1035 DRMPREFYAEMWDKVTRLG-VWQGEIWNRRKNGEPYLEWLSINTVKDKNGKVVNYVGMFS 1093 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKK 279 DIT+ R +Q+R+ LA D +TGLPNR D ++ A+ HA+ ++ VGVV++DLDNFK Sbjct: 1094 DITKVRESQQRIEYLATHDELTGLPNRALFNDRLNLALAHAERSRESVGVVFIDLDNFKV 1153 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILT 339 VND GH GD+LL+ ++ +L C+ + +AR GGDEF+VL N + A R+LT Sbjct: 1154 VNDTLGHETGDKLLKQAAMRLLECVRAEDTVARLGGDEFVVLLVNADRQQATLTAERLLT 1213 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 L + G E + S S+G+++ PE SD+ +++R+AD+AMY AK+ G+ F F+ ++ Sbjct: 1214 GLSTSYHFGEHECFISASIGLSMFPEDASDANSLMRNADSAMYRAKDHGKNGFRFFSADL 1273 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDF 458 + + L L+T LR+A+EN +L +HYQP++ V EALVRW+ +I P+ F Sbjct: 1274 ASQASKRLALETGLRRAIENGELFVHYQPQVRLECDTVVGAEALVRWRY-NGEVIDPVVF 1332 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVL 517 I AE+S LI + WV+ + RQ+ +W G+ LR++VNISAR + L ++ Sbjct: 1333 IPIAEQSHLIFAIDDWVLGEACRQIIEWDRAGLPPLRISVNISARHFRKDGMAADLMDIV 1392 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 + +E+TE L+ + + A ++ + + G ++ +DDFGTG+SSLS L RFPI Sbjct: 1393 SAHGVSPQRLCIEITEGVLM-DVDRAQRMLAELVESGLRISIDDFGTGFSSLSYLKRFPI 1451 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 +K+ + FV I +++ I+++A+ L + V+ EG+E + A L G + Q Sbjct: 1452 HELKIARSFVDGISTDADDRAIASVIISLARQLGMSVVGEGIERTGQHAELEAFGCHRGQ 1511 Query: 638 GFLFAKPMPAVAFERWY 654 GFL+A+P+ AF W Sbjct: 1512 GFLYAQPLAPDAFADWV 1528 Score = 81.9 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 5/173 (2%) Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPA---VARDLSHGLSFAEQVVSEAHSAI 124 + + ++H+ + + AG + D + V R + V++ + S + Sbjct: 817 VNANRRHYALHIAPLLRDTQRIAGVILLFADNTSLYEVERSARETQVRLQAVMNNSVSLM 876 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 + D+ G Q N E G +VIG++ +LF E Sbjct: 877 AVKDAPGRYQFANPKFEQTFGFATGEVIGKTDLQLFPEAVSDLFRESELEAIRLRKGI-E 935 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 E +P G+R FL + G L TDIT +RA+E+LR+ A Sbjct: 936 REESLPLAAGERHFLVVRFPLFDDDGAI-TGLCFQATDITARKRAEEQLRLAA 987 >UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica KT99 RepID=A9D5G8_9GAMM Length = 1066 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 187/603 (31%), Positives = 318/603 (52%), Gaps = 13/603 (2%) Query: 65 MMSLTVDES-DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 M +T+D S +L V + G+ E A + + + + L A V + Sbjct: 464 MQKMTLDPSLELKVPVRGKD----EIAQLSHSLNLMLEERSKANRQLKLAAAVFESSSEG 519 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 I++ D+ +I+ N TG DV G+S L S+++ ++ + Sbjct: 520 ILVTDADNHIELVNPAFTQITGYSLEDVKGRSPSVL-NSQQQTRHFYDEMWQSLQTEGKW 578 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 + E+W GQ + V I I DI+ ++ ++ + + D +T Sbjct: 579 QGEIWNKRKNGQVYPEYLAITVVKDDAGQIIQHIGLFLDISNRKQYEQNIWYKTHYDLLT 638 Query: 244 GLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 LPNR+ + + A N +V +++++LD FK ND YGH G++LLR V+ + Sbjct: 639 KLPNRSLYTIKVQQEMTMAQENNRQVAILFINLDRFKYTNDIYGHEVGNKLLRQVASRLK 698 Query: 302 SCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 S + +AR GGDEF+++ Q ++A+A ++ RL PF + ++ S S+GI Sbjct: 699 SLVNKHDFVARLGGDEFIIILPRIRRQHQVQAIADKVNARLASPFGVDGDDLMISASIGI 758 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 +L PE+GS + R+A+TAMY AK GR + ++ EMN+ + E + L+ LR+A+ Sbjct: 759 SLFPENGSSEELLTRNAETAMYQAKNDGRNNYRYYSSEMNEHILERIQLEQRLRQAVIRQ 818 Query: 421 QLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 + +HYQP + + +EAL+RWQ P+ G+I P FI AEE+GLI P+G WV+ Sbjct: 819 EFCLHYQPIVNLDDRTITGVEALIRWQDPKFGMIAPDMFIPIAEETGLIEPIGEWVLQQA 878 Query: 480 VRQVAKWRDKGINLRVAVNISARQLADQT---IFTALKQVLQELNFEYCPIDVELTESCL 536 + +A W G + +A+N+S RQL Q LK +L++ + E + +E+TES L Sbjct: 879 LTDLAHWHRLGFKISMAINVSGRQLLGQNKTSFKCLLKALLKKNDIEPQYLHIEITESML 938 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 +++ E ++V++ LG +++DDFGTGYSSLS L RFPI IK+D+ F+ ++ + Sbjct: 939 MDDTEQCMTVLESIRSLGLDIYIDDFGTGYSSLSYLKRFPIAVIKIDKSFIDNMLESESD 998 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 L++AIV + Q+L L+++AEG+E+ + L G + QG+LF+ P+PA + + Sbjct: 999 AKLIKAIVMMGQSLELKLVAEGIETHAQWQMLQALGCDFGQGYLFSHPLPAQELASFLHQ 1058 Query: 657 YLK 659 + Sbjct: 1059 QAQ 1061 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 170/448 (37%), Positives = 272/448 (60%), Gaps = 5/448 (1%) Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGV 269 N + ++ E +R +E LR LA DS+T LPNR D + A+N A NK + V Sbjct: 491 NANLYQAAQQELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAV 550 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA 329 ++LDLD+FKKVND GH GDQLL+ ++ L +AR GGDEF +L N +++ Sbjct: 551 MFLDLDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAE 610 Query: 330 -LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 +A +I+ L P+ IG E + + S+GIAL P+ G+D+ +++++AD AMY AKE G Sbjct: 611 NASIVADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMG 670 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQS 447 R + +TP MN + L+ NLR+AL+ + VI+YQP++ G++ +EAL+RWQ Sbjct: 671 RNNYQFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQH 730 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLAD 506 P+RG+I P +FI AEE+GLI+P+G W++ Q W+D+G +RV VN+SARQ Sbjct: 731 PQRGMISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQ 790 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 + + VL++ +++E+TES +++ + + ++G + +DDFGTGY Sbjct: 791 PHLPQYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGY 850 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSL+ L R PID +K+D+ F+ D++ + +++ AI+ + L ++V+AEGVE+ ++ Sbjct: 851 SSLNYLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLM 910 Query: 627 FLTKNGINERQGFLFAKPMPAVAFERWY 654 FL + + QG+LF KP+P E+ Y Sbjct: 911 FLRQQQCDLMQGYLFTKPLPVRELEQKY 938 Score = 53.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 40/107 (37%), Gaps = 2/107 (1%) Query: 129 SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR--SGNAYEVE 186 + G + N ++ +V+G+ ++ +A + + +G E Sbjct: 80 TDGTVLLINETALRTFHMQPEEVVGKKLWDTPWWSYDADLHTQLKNAVKQAATGQTIYYE 139 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 G++++++ I+L+ G DIT+ + ++ L Sbjct: 140 TINHLVSGKKIYIYFTLNPVLNKNNEVIYLVAEGRDITKRKMIEQDL 186 Score = 46.8 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 72/222 (32%), Gaps = 31/222 (13%) Query: 72 ESDLSVHLVGRKI--NKREWAGNASAWHDTPAVARDLSHGLSFAEQ----VVSEAHSAIV 125 ++ + + +E R + + A + ++ A Sbjct: 174 RDITKRKMIEQDLISTNQELVAANEELISIEEELRISNKEIYLAHERLNNILESITDAFY 233 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 ++ + + N E K D+IG+++++ F + Sbjct: 234 AVNHQWEVTYVNTEAEKLLHKKRLDIIGKNIWQEFSEMVHTK-FYHILHQVMSEQIYQQF 292 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL----RILANTDS 241 E + Q + N + S I+ DITE + QE++ + L+ S Sbjct: 293 EYFF-----QPTGKWFNIHAYPSSDGLSIY----FHDITEYKLVQEKMSLQNQYLS---S 340 Query: 242 I--TGLP--NRNAMQDLIDHAINHA---DNNKVGVVYLDLDN 276 + T L NR + +L+ + + G ++L +DN Sbjct: 341 LHETTLALMNRLNLDELLKAIVTRSAELSGTDHGFIFL-IDN 381 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 198/639 (30%), Positives = 323/639 (50%), Gaps = 13/639 (2%) Query: 34 TTETTEPDRTLQLSAEQAA-------RIREMTVITSS-LMMSLTVDESDLSVHLVGRKIN 85 + L A R R IT ++ L + ++ Sbjct: 117 PAGALAGKSLVDLMPPGVAHEIGESVRRRHRDNITEQHYVLPLIHRNGHRLSVELHSRLT 176 Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 + + + L A V + I++ D+ G + N TG Sbjct: 177 EFRGERVIVGVGLDISARLETERTLQLAATVFENSSEGILLTDADGTLITVNPAFTRITG 236 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 E +G+ ++F + A+ ++ E++ G+ ++ + Sbjct: 237 YTEEQALGRR-SRMFRTDHVGQATNMQMMQSLAEHGHWQGEMFDRHRDGRLYPVWLSLSA 295 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN 265 + + TDI+ + A++RL LA+ D +T L NR+A+ ++ Sbjct: 296 VYDEDR-VSNYVGVFTDISRRKAAEDRLVFLASHDPLTRLLNRDALFRKLEDICLSGIEQ 354 Query: 266 KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT 325 V+++DLD FK +ND++GH GD LLR V+ + + + +LAR GGDEF +L +T Sbjct: 355 SFAVLFIDLDRFKLINDSFGHATGDNLLRIVAARLSFVVGSNALLARQGGDEFTLLLEDT 414 Query: 326 SQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 Q +A+ MA+R+L L P + E++ + S+GIAL+PEHG D+ ++RHADTA+Y A Sbjct: 415 GQRTAVIDMANRLLDELSQPITLENQELHITASIGIALAPEHGKDAATLLRHADTALYRA 474 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALV 443 K+ G+ F FT ++ + L L+ LR AL +QL + YQP+I R + +E L+ Sbjct: 475 KDAGKNTFAFFTHTLHGLSNQRLALENALRHALPRNQLTLAYQPQIDPHRQRLVGVEVLL 534 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISAR 502 RW PE G + P FI AEE+GLI+P+GRWV+ RQ+A W G ++ VAVN+SA Sbjct: 535 RWHHPELGQVSPATFIPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGHVAVNLSAH 594 Query: 503 QLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDF 562 Q D + LK VL + +++E+TES LI N A++++ + +LG ++ +DDF Sbjct: 595 QFNDPGLTHHLKAVLSDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRLSIDDF 654 Query: 563 GTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESA 622 GTGYSSL+QL RFP+D +K+D+ FV I ++ AI+A+A+ L+L V+AEGVE+A Sbjct: 655 GTGYSSLAQLKRFPLDTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAEGVETA 714 Query: 623 KEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 + FL + G QG+ ++ P+ A A + + + A Sbjct: 715 DQRDFLARCGSELIQGYFYSPPLAAEALHSFSRMFDSDA 753 Score = 62.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 6/151 (3%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK 147 W + + RDL + ++ ++ I IL + N+ + G Sbjct: 62 YWRRREHLYRSQRSELRDLRAQ---YDALIEQSLVGIYIL-KEHTLIYANQRASEMLGYP 117 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 + G+S+ L R + L + G RL + + + Sbjct: 118 AGALAGKSLVDLMPPGVAHEIGESVRRRHRDNITEQHYVLPLIHRNGHRLSVELHSRLTE 177 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILAN 238 G+ I + G DI+ + L++ A Sbjct: 178 FRGERVI--VGVGLDISARLETERTLQLAAT 206 >UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZI3_COLP3 Length = 858 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 190/586 (32%), Positives = 303/586 (51%), Gaps = 6/586 (1%) Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQ 134 LS+ + I R+ L AE+++ + I+I D +G I Sbjct: 260 LSMDNIMSDIELAYVEELHQIVQQRDIALRESKKHLLVAEKIIEASLDGIMITDEQGTII 319 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 N TG KE +V+G + K+ S R + + + ++ E+W Sbjct: 320 SVNPAFTRVTGYKEAEVLGLN-SKILSSGRHTSDFYQQLWLCILEQGVWQGEIWNKRKNS 378 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDL 254 + + S N +DI+E + A++R+ LA D +T LPNR D Sbjct: 379 EIYPQWLTIIEISEGVDNNKVFAAIFSDISERKLAEKRIENLAFYDELTQLPNRRLFFDR 438 Query: 255 IDHA--INHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLAR 312 +D A I H NNK+ + ++DLD FK+VND YGH GD LLR + + + +AR Sbjct: 439 VDMALAIAHRKNNKMALFFIDLDYFKEVNDNYGHRIGDLLLRSFAKRLTESSKEGDTVAR 498 Query: 313 PGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDST 371 GGDEF +L ++ + + +RI+ +LR P+ I + + S+GIA+ PE G++ Sbjct: 499 IGGDEFTLLLTDMREVDHICKACNRIVEKLRQPYHIEGHALNITTSIGIAVYPEDGTNEE 558 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 ++++AD AMY AK+ GR F +FTP MN E + ++LR AL +++L ++YQ +I Sbjct: 559 ELMKNADIAMYRAKDIGRNSFQLFTPAMNAHSQERSLIQSHLRLALVHNELELNYQAQIH 618 Query: 432 -WRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 G+V +EAL+RW +P G + P FI AEE G I + WV+ +Q W D+G Sbjct: 619 GVTGKVMGVEALLRWYNPILGQVSPAQFIPMAEELGFIAEIDHWVLEHACKQRKLWLDQG 678 Query: 491 INL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 ++ R+AVNISA + +++ VL + ++VE+TE C I+ + A S+++Q Sbjct: 679 LDCGRIAVNISALHFHQGNLVASVESVLAQSQLPAELLEVEITEGCFIKQMDKATSILKQ 738 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 ++G +V LDDFGTG+SSLS L PID +K+D F+ + + AI+ +AQ Sbjct: 739 LKKMGVKVALDDFGTGFSSLSYLTSLPIDTLKIDASFIAKLPHNFRESQITSAIITLAQN 798 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 LNL ++AEGVE+ + FL + G QG+ + KP+ A R + Sbjct: 799 LNLDIVAEGVETEAQKIFLIERGCEIMQGYFYNKPVCAKNLPRVIQ 844 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 196/577 (33%), Positives = 320/577 (55%), Gaps = 20/577 (3%) Query: 97 HDTPAVARDLSHGLSFAEQ-----VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 H+ + L+ +A + ++ + + I + D GN+ + + + E Sbjct: 177 HEEQSERHRLAEQALWASETYLNAILHYSPALISVKDLDGNVVLASDHFKHMADIDESGF 236 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGN-AYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 +G++VF +F R+ A S + + ++ YEVEL + G KF G Sbjct: 237 VGKNVFDVFP--RDIAQSMWDIDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLRGKE 294 Query: 211 KNEIFLICSGTDITEERRAQ-------ERLRILANTDSITGLPNRNAMQDLIDHAINHAD 263 + GTDI+E + A+ RL +A D++T LPNR+ D I H + A Sbjct: 295 GKVFGVCTIGTDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLARAR 354 Query: 264 NN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL 321 + +V ++ LD+D FK VND+ GH GD LL+ +++ + + +AR GGDEF+V+ Sbjct: 355 RSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEFVVV 414 Query: 322 ASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 + +A+++L L P I + + S+G+++ PE G+D+ ++++AD A Sbjct: 415 LEGIHDVDDVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNADIA 474 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSL 439 MY AKE G+ +T MN YL L+ +LR+A+E +QL ++YQP+I G++ + Sbjct: 475 MYKAKEAGKNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDMTGV 534 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVN 498 EALVRWQ PERGL+ P FI AEE+GLIVP+G WV+ + +Q W D G N+ +VAVN Sbjct: 535 EALVRWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKVAVN 594 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 +S RQ + ++ +LQE E +++E+TESC +E+ ++ + Q +Q+G + Sbjct: 595 LSPRQFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGTFLA 654 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 +DDFGTGYSSL+ L RFPI +K+D+ F+ DIH ++ + I+ +A + L+V+AEG Sbjct: 655 IDDFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVVAEG 714 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 VE+ + +L G ++ QGFL+AKPM A E + Sbjct: 715 VETESQAEWLRAKGCDQVQGFLYAKPMTAKQLESHFH 751 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 203/654 (31%), Positives = 326/654 (49%), Gaps = 23/654 (3%) Query: 22 RLTESSDVLRFSTT-ETTEPDRTLQLSAEQ--AARIREMTVITSSLMMSLTVDESDLSVH 78 +L S+ L T E L+L E+ A ++EM ++ L +L + + Sbjct: 161 KLANSAWELALGYTPEELIGKNFLELVHEEDRAVTVKEMQNLSKGL-KTLYFENRYRHKN 219 Query: 79 LVGRKINKREWAGNASAWHDTP-AVARDLS------HGLSFAEQVVSEAHSAIVILDSRG 131 R I W+ A+ AV RD+S GL A V + I+I D +G Sbjct: 220 GSYRVIA---WSAAAADQDSIICAVGRDISKENAAKQGLFQAAAVFKNSGEGILISDEKG 276 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 I+ N TG + IGQ+ L R +A ++ + + E+W Sbjct: 277 LIRDVNAAFSQITGYSRDEAIGQATSLLRSGRHDAEFYKKMWHA-LKETGTWRGEIWNRR 335 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G G + TDIT+ + +E+L+ LA+ D +T LPNR + Sbjct: 336 KSGAVFPELLTISKIDGQNS---GFVAIFTDITQLKETEEQLQKLAHYDPLTELPNRYLI 392 Query: 252 QDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 + + +I A ++ V +LD+D+FK +ND+ GHL GD+LL + + L D Sbjct: 393 NERLQQSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAGDKLLAMTANRLRELLRDDDT 452 Query: 310 LARPGGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGS 368 + R GGDEFL+L + + + +A +I+ LR P + V S SVGI++ P+ G Sbjct: 453 VGRIGGDEFLMLLEDINSPDVATNIAEKIIGALRKPTILEGRSVSVSASVGISIYPDDGQ 512 Query: 369 DSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQP 428 + ++ +AD AMY+AKE GR F ++ + + F+ + +D+ LR+A ++ + +QP Sbjct: 513 TAETLMSNADAAMYSAKEQGRNTFRFYSENLTRAAFQNVLIDSALREAKSRNEFRLAFQP 572 Query: 429 KITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR 487 +I + LE L+RW P G + P FI AE +GLI +G+WV+ Q KW Sbjct: 573 QIDIVTNSLLGLEVLLRWHHPTLGTVSPAQFIPQAERTGLIRDIGQWVLEQACLQGNKWL 632 Query: 488 DKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSV 546 +G+ R+AVN+SA Q + ++QVL+ NF +++ELTES L+++ E + Sbjct: 633 AEGLPFGRLAVNVSAPQFRAEDFVDQVRQVLEYANFPPNRLELELTESVLVQDTEQLIGN 692 Query: 547 IQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAV 606 + + +G Q +DDFGTGYSSLS L + PID +KLD+ FV +I + + A+VA+ Sbjct: 693 MDELRAMGIQFAIDDFGTGYSSLSYLKKMPIDRLKLDKSFVDNISTDDNDRIIAEAVVAL 752 Query: 607 AQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 QA+ L+VIAEG+E ++ L G + QGFL+ PM E ++ +R Sbjct: 753 GQAMGLEVIAEGIEYEEQARALRDIGCTQFQGFLYGMPMYTSRIEGVLRKEAQR 806 Score = 51.0 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 8/123 (6%) Query: 117 VSEAHSAI-VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 + + + ++ G+I+ N E G ++IG++ +L + A + + + Sbjct: 143 FFQQPNGMHLLASIEGDIKLANSAWELALGYTPEELIGKNFLELVHEE-DRAVTVKEMQN 201 Query: 176 FFRSGNAYEVELWIPTCKGQ-RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + E G R+ + S + G DI++E A++ L Sbjct: 202 LSKGLKTLYFENRYRHKNGSYRVIAWSAAAADQDS-----IICAVGRDISKENAAKQGLF 256 Query: 235 ILA 237 A Sbjct: 257 QAA 259 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 796 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 189/586 (32%), Positives = 303/586 (51%), Gaps = 7/586 (1%) Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 L + V K + E G D R L A+ V + A++I DS+ I Sbjct: 486 ILEITKVKLKNAQGEVVGLIGISKDITN-KRQQEEDLKLADIVYQNSSEAMMITDSKNEI 544 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 N + TG ++IG++ +F S ++ + + ++ E+W Sbjct: 545 IAINPALSEITGYSSSELIGKNPN-VFSSGKQNPEFYQLMWEEIKLTGTWQGEIWNTKKN 603 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G+ + + N I +DITE+++ + A DS+T LPNR D Sbjct: 604 GKEYPEWLSISTIYDDYGNVFRRIALFSDITEKKKKDALILRQAKYDSLTNLPNRIMFID 663 Query: 254 LIDHAI--NHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 ++ I +H N K ++++DLDNFKK+ND GH++GD LL + I C+ +A Sbjct: 664 RLEQEIKVSHRKNQKFALIFIDLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVDTVA 723 Query: 312 RPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDS 370 R GGDEF +L S+ + +E++ ++L L PF I + Y S S+G+ + P S + Sbjct: 724 RLGGDEFTILLSDIADIHNVESICQKVLQTLSEPFFISKMYTYISASLGVTIYPNDASST 783 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 ++++AD AMY AK GR +FC FT M + ++L L +LRKA+ +QL + YQP + Sbjct: 784 LELLKNADQAMYLAKNLGRNRFCYFTASMQEEALDHLELINDLRKAISLNQLEVFYQPIV 843 Query: 431 TW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 G +R EAL+RW+ P RG++ P +FI AEESGLI+ +G WV V+ + +D+ Sbjct: 844 ELQTGVIRKAEALLRWKHPVRGMVSPAEFIPLAEESGLIIEIGDWVFKQTVQHINTCKDQ 903 Query: 490 -GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQ 548 G++++++VN S Q + L E I +E+TE L+ N+ + + Sbjct: 904 LGLDIQISVNKSPVQFRESIDQLDWLAYLAENQLPGENIVIEITEGLLMNNNTSTMERLS 963 Query: 549 QFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQ 608 +F G + +DDFGTGYSSLS L +F +D +K+DQ F R+I L AI+ +AQ Sbjct: 964 KFRSAGIGLSMDDFGTGYSSLSYLKKFALDYLKIDQSFTRNIAPGSEDMILSEAIITMAQ 1023 Query: 609 ALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 L L+VIAEG+E+ ++ L G + QG+ F++P+PA F + Sbjct: 1024 KLGLKVIAEGIETKEQMELLIGAGCDYGQGYYFSRPIPAEDFLQLL 1069 Score = 69.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 8/152 (5%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 + A+++ + ++S L ++ + I G N+ + G+KE Sbjct: 378 FNEMATSFQNLMIDKEEISSRLR---AIIDNSPIGIWFTGIDGRYHFVNKTFCNLAGIKE 434 Query: 149 HDVIG---QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 D++ ++ +L + + E IP + L K Sbjct: 435 EDMLNTPSSNLAELLGDEIAHHCLDSDKAALAQDSPHVSFE-TIPRSNAKPYILEITKVK 493 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + + LI DIT +R+ +E L+ LA Sbjct: 494 LKNAQGEVVGLIGISKDITNKRQQEEDLK-LA 524 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 796 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 184/565 (32%), Positives = 284/565 (50%), Gaps = 7/565 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + + + L A V + A+++ D+ NI N + TG +VIG++ Sbjct: 584 ENISARKQAEEELRLAHTVFEHSSEAMLVTDADNNIITINPAFSEMTGYSLEEVIGKNP- 642 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 K+ S R+ + + + E+W G+ + + Sbjct: 643 KILSSGRQGKEFYQELWNTLETSGEWRGEIWNRRKSGEEYAEWLAINNIYSEDGKLFRRV 702 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLD 275 +DITE++RA + AN D +T LPNR D + I + + ++ ++++DLD Sbjct: 703 ALFSDITEKKRADALIWNQANYDLLTQLPNRRLFSDRLQQEIKKSQHDHSQFALLFIDLD 762 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MA 334 FK+VND GH GD LL + S I L+ + R GGDEF V+ +N ++ +A Sbjct: 763 RFKEVNDTLGHSHGDYLLIEASHRIQRHLKETDTVGRLGGDEFTVIIANLPDPSVMTLIA 822 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 R+L L P+ + VY S S+GI + PE + S ++++AD AMY AK+ GR +F Sbjct: 823 QRVLDALAAPYDLEGEIVYLSASIGITVFPEDATTSAELLKNADQAMYEAKKNGRNRFSF 882 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLI 453 FTP M + + +LR AL +Q +++QP + + EAL+RWQ PE G I Sbjct: 883 FTPMMQAMAQARMRMMRDLRNALGLNQFTVYFQPIVDLSSQRIHKAEALIRWQHPELGFI 942 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTIFTA 512 P +FI AEE+GLI +G WV + V + G + +V+VN S Q D+T Sbjct: 943 SPAEFIPLAEETGLIHEIGDWVFQQSAQLVKQCIPIVGDDFQVSVNKSPVQFRDRTQAHQ 1002 Query: 513 -LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 + L L I VE+TE L+ D + F G QV +DDFGTGYSSLS Sbjct: 1003 DWMEYLSGLGLSGHNIVVEITEGLLLNADSGISDKLLHFRDAGMQVAIDDFGTGYSSLSY 1062 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L +F ID +K+DQ FVR++ + +L AI +A L+L+VIAEGVE+ + L + Sbjct: 1063 LKKFDIDYLKIDQSFVRNLSGEGEDLALCEAIATMAHKLDLRVIAEGVETTAQRDLLAQI 1122 Query: 632 GINERQGFLFAKPMPAVAFERWYKR 656 G + QG+LF++P+PA F + +R Sbjct: 1123 GCDYGQGYLFSRPVPAEEFMQLLER 1147 Score = 54.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 5/134 (3%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 L + + + +A + + D + ++ G ++ ++G + + + Sbjct: 471 LKQAVEQQKMFIQQAPICVAMFDRDMRYLACSNQWQEEFGHQQGSLLGLNHYDVHP--DI 528 Query: 166 AAASRRNNRVFFRSGNAYEVE-LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 R+ ++ E E LWI GQ L+ + +I S +I+ Sbjct: 529 PEKWRQAHQRALAGERLEEEEDLWI-RADGQHLWTRWMITPWMDDSQTIQGIIISSENIS 587 Query: 225 EERRAQERLRILAN 238 ++A+E LR LA+ Sbjct: 588 ARKQAEEELR-LAH 600 Score = 44.1 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 13/139 (9%), Positives = 43/139 (30%), Gaps = 12/139 (8%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQR----FNRLCEDYTGLKEHDVIGQS--VFK 158 +L++ +Q++ + +I+ N + G ++ + + Sbjct: 339 ELANQHQRLQQIIDGTAAGTW----EWDIRSGDCIVNPRWAEMLGYTPDELEPCTADSCR 394 Query: 159 LFMSRREAAASRRNNRVFFR-SGNAYEVELWIPTCKGQRLFLF-RNKFVHSGSGKNEIFL 216 + + R + + E G +++ R + + + Sbjct: 395 ALCHPDDLEQLVQALEAHLRGETDYFASESRRRHKNGHWIWVADRGRVTRRSPQGEALTM 454 Query: 217 ICSGTDITEERRAQERLRI 235 + +IT+ + A+ L+ Sbjct: 455 SGTRLEITKLKLAETTLKQ 473 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 179/564 (31%), Positives = 296/564 (52%), Gaps = 10/564 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR-GNIQRFNRLCEDYTGLKEHDVIGQSV 156 A ++ V+S+A I+++D I N + ++ Sbjct: 298 KLLASRKERKDTEKRYRSVISQASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQLTL 357 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 + + R R N + E + G + + N + S + I + Sbjct: 358 YDIMEDDRSGVDWRINR--ILSEKVCFLGEHTVRAEDGSMVEVDLNANLVSYGEQQVICM 415 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI--NHADNNKVGVVYLDL 274 + DI+E +R + L +A+ D++TGLPNR D + + + V+YLDL Sbjct: 416 V--LRDISERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDL 473 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-M 333 D FK +ND GH GD LL++V+ + + ++R GGDEF ++ + A + Sbjct: 474 DRFKIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLV 533 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 A +IL PFR+ E++ + S+G+ L P G + ++++ADTAMY AKE GR + Sbjct: 534 AEKILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQ 593 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGL 452 F+ EMN RV E L ++T LR AL ++ ++HYQP++ G + +EAL+RWQ P++GL Sbjct: 594 FFSEEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGL 653 Query: 453 IPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFT 511 I P FI AEE+GLI+P+G WV+ + Q W++ G +R++VNIS RQ + Sbjct: 654 ILPDAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPD 713 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 ++ +L+E + +++E+TES ++ N E A+S++ + ++G + +DDFGTGYSSLS Sbjct: 714 TIRGILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSL 773 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L R P D +K+D+ FV I ++LV I+ + + L ++AEGVE ++ FL + Sbjct: 774 LKRLPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEER 833 Query: 632 GINERQGFLFAKPMPAVAFERWYK 655 E QG+ F+KP+PA + K Sbjct: 834 NCQEVQGYYFSKPLPAETLQPLLK 857 >UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Gammaproteobacteria RepID=Q0A572_ALHEH Length = 840 Score = 795 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 195/571 (34%), Positives = 292/571 (51%), Gaps = 8/571 (1%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 A L AE+V+ + IVI D+ I+ N TG +V G+ Sbjct: 264 ALEQRDKALAQSRKHLQLAERVIDSSLEGIVITDAHARIEFVNPAFTHLTGYSLEEVAGR 323 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 + L S R + R + + E+W G + + Sbjct: 324 TPAVL-SSGRHPPSFYREMWQALQEQGYWRGEIWNRRKSGALYLELLTITAITNDDGDTT 382 Query: 215 FLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYL 272 TDIT R + ++R LA D +T LPNR + D + AI HA ++ + V+++ Sbjct: 383 HYAGLFTDITHIRENERQIRQLAYYDPLTRLPNRRLLDDRLSLAIKHAHRHRQRLAVMFI 442 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALE 331 DLD+FK+VND GH GD+LL VS + L D LAR GGDEFL L + + Sbjct: 443 DLDHFKQVNDTLGHAVGDELLLRVSERLREHLREDDTLARLGGDEFLALLPDLQEVDEAI 502 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 + R++ + P+ IG + CS+G++L P+ G A+IR+AD AMY +K GR Sbjct: 503 RVTQRLIEAISQPYTIGDHDFRVGCSIGLSLYPDDGESPDALIRNADGAMYRSKTEGRNT 562 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQ-LVIHYQPKITWR-GEVRSLEALVRWQSPE 449 + ++ PEM+ R L L+T LR E + L IHYQP WR G + S EAL+RW P Sbjct: 563 YRLYAPEMDTRAKNQLALETALRDTAETGEGLSIHYQPIFDWRTGALHSAEALLRWHHPT 622 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQT 508 RG + P +FI AE SGLI+PLG+ V+ V Q+ +W+ G+ + VA+N+SA+Q Sbjct: 623 RGAVAPGEFIPLAERSGLIIPLGQAVMRMVCTQLKRWQAAGLRPVPVAINLSAKQFWQDE 682 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + ++++LQ + + ELTES L+ + E L + +G V +DDFGTGYSS Sbjct: 683 LPGFIRKMLQRCDLNPGLMGFELTESTLMHDIERGLDTLAALRGMGCSVAIDDFGTGYSS 742 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPV-SQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 L+ L R P+ +K+D+ FV D+ ++V A+ +A+ L LQV+AEGVE+ + Sbjct: 743 LTYLQRLPVTTLKIDRSFVSDLGTCRKGGCAIVAAVTGLARELELQVVAEGVETEAQLRA 802 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 L + + QGF +P+PA AF Y R + Sbjct: 803 LDRYQVALVQGFKTGRPVPADAFSEAYLRAM 833 >UniRef50_Q5NZD7 Putative signal transducer protein with histidine kinase domain n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZD7_AZOSE Length = 920 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 195/577 (33%), Positives = 305/577 (52%), Gaps = 11/577 (1%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 R A H A L+ A + A +VI G I NR TG Sbjct: 340 RALAQAQELLHQREADRAQAEEKLALAATALDSAVEGVVIA-RGGRIATVNRAFTSITGY 398 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 + +VIGQ + L R + R ++ E+ G+ + + Sbjct: 399 RSAEVIGQPLAILLAEAE--KTHRNDRRRAMCETGQWQGEVHGRRKNGEMYPAWSSIS-R 455 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN- 265 + G +E+ L+C +DI+ ++ + RL+ LA+ D++T LPNR ++ + + A+ + Sbjct: 456 AAYGSDEMILVCVFSDISAAKQYEARLQHLAHYDALTELPNRLLFRERLADMLVRAERHG 515 Query: 266 -KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN 324 + ++++DLD FK +ND GH GD+LLR V+ + C+ AR GGDEF VL Sbjct: 516 NMLALLFIDLDGFKPINDTLGHAAGDELLRRVAERLGGCVRASDTTARLGGDEFAVLLDE 575 Query: 325 T-SQSALEAMASRILTRLRLPFRIGLIEV--YTSCSVGIALSPEHGSDSTAIIRHADTAM 381 S +A IL L P+ + Y S S+GI P D+ ++R AD AM Sbjct: 576 LRSPEEAGIIARNILDTLERPYILAGQPQCQYISASIGIGCYPSDSLDAETLLRQADMAM 635 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLE 440 Y AK+ G+ ++ F PE+N + E L++ +LR AL+ D+L + +QP + + EV +E Sbjct: 636 YRAKQEGKNRYRFFAPEINAQASERLFMANSLRAALDRDELRLVFQPCMDFATLEVAGVE 695 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNI 499 ALVRW+ P++G I P FIS AEESGLI P+G WV+ + R+V +W++ G RVAVN+ Sbjct: 696 ALVRWEHPQKGTILPSRFISLAEESGLIEPIGEWVLREAARRVREWKNAGIFAGRVAVNL 755 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 S RQ + + L VL E +++E+TE ++E+ E A+ V+ + G + + Sbjct: 756 SPRQFRRSDLASRLLVVLDEAGLAPRDLELEVTEGMIMEHPERAVVVLTELVAAGVSISI 815 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSL+ L RFP+ ++K+D+ FV + +SL RA+VAVA++L L V+AEGV Sbjct: 816 DDFGTGYSSLAYLKRFPVHSLKIDRSFVSGLPGDRNDRSLTRAVVAVAKSLGLSVVAEGV 875 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 E A + FL + G + QG F++P+ A + + Sbjct: 876 EHAGQVDFLRRIGCDFAQGHYFSRPLDPAALGAFLRE 912 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 197/660 (29%), Positives = 331/660 (50%), Gaps = 22/660 (3%) Query: 5 RESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSL 64 R S L LG +L ES +++ P+ + A+ A +R+ I L Sbjct: 196 RWSEGLRQMLGYEQEPEQLAESMNLIH--------PEDRPAVEAQVTASLRDRNSI---L 244 Query: 65 MMSLTVDESDLSVHLVGRKINKREW--AGNASAWHDT--PAVARDLSHGL-SFAEQVVSE 119 + + D V + E+ AG + T R L+ A+ V + Sbjct: 245 IGEFRIRHHDGGWRWVESRGRIVEFDEAGQPTLMIGTMLDITERKLAEAEHRLADLVFTG 304 Query: 120 AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRS 179 I I D++ NI R N TG + +++GQ+ +L S + A Sbjct: 305 IGEGICITDAKRNILRINDAFSTITGYQADEIVGQNP-RLLKSGVHSPAFYAEIWKTIDQ 363 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANT 239 ++ E+ G + + + + I +D++E + A ER++ L++ Sbjct: 364 YGNWQGEITNRHKDGSLVTEWLSISSLRDTTGTASHYIGIFSDLSERQAAAERIQYLSSY 423 Query: 240 DSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVS 297 D++T LPNR+ D ++ A+ A ++ LDL+ F+ +ND G GD++L +V+ Sbjct: 424 DTLTELPNRHLFDDRLNQALLTARRFERGTALILLDLNRFRLINDTLGPPAGDEILVEVT 483 Query: 298 LAILSCLEHDQVLARPGGDEFLVLASNTSQSALE-AMASRILTRLRLPFRIGLIEVYTSC 356 + + + R G+EF + +N S A+A R+L + +PF + V + Sbjct: 484 RRLKLQVREGDTVGRRAGNEFGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITA 543 Query: 357 SVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKA 416 S+GI++ P++G + A++R AD A+ AK+ GR F ++PEM+ L +++ LR A Sbjct: 544 SIGISVFPKNGENGEAMLRSADAALLRAKQSGRNTFSFYSPEMDADAARRLSIESALRDA 603 Query: 417 LENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWV 475 L D+ +HYQP+++ G + +EAL+RW S G I P++FI AEE+GLI+ +G WV Sbjct: 604 LARDEFCVHYQPQVSLDSGHMIGMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWV 663 Query: 476 ILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTES 534 + Q W D G+ L VAVN+S RQ + + L E +++E+TES Sbjct: 664 LRTACHQTKAWLDLGLLPLHVAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEITES 723 Query: 535 CLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQP 594 I++ + A+++ + LG ++ LDDFGTGYSSL+ ++RFP D IK+DQ FVRDI P Sbjct: 724 AFIDDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNP 783 Query: 595 VSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 V+ ++ A + + ++LNL V+AEGVE+ + AFL + QG+LF++P+P F Sbjct: 784 VNAAIASAAIVMGRSLNLSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLL 843 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 794 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 190/564 (33%), Positives = 290/564 (51%), Gaps = 6/564 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 R + A V + +AI+I D+ G I++ NR TG + +G + Sbjct: 331 QDITERRQAEDEMRLAASVFDNSLNAILIADANGRIRKVNRAFTAITGYTAEEAVGDTP- 389 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 +L S + ++ ++ EL G+ + + + + I Sbjct: 390 RLMKSGLHSPGFYGEMWAELQACGKWDGELMNQCKDGRIISVRESIAAVHDPAGAVAYYI 449 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLD 275 DITE++ + +R+ LA D +TGLPNR + D H + A D ++ V++LDLD Sbjct: 450 GIFHDITEQKASAQRIHQLAYYDVLTGLPNRALLMDRCQHELARAMRDGKRLAVLFLDLD 509 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMA 334 FK +ND+ GH GD LLR V+ + L +AR GGDEF+VL + SA +E A Sbjct: 510 RFKHINDSLGHPVGDGLLRAVAQRLQGTLRDSDTIARLGGDEFIVLLEHVETSAGVELAA 569 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 RIL R PF++ + SVGI+L P+H SD T++ ++AD A+Y AK GRG F Sbjct: 570 RRILDAFRDPFQLEEHRLSVGASVGISLFPDHASDITSLFKYADLALYQAKAAGRGDFRF 629 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 F P N + + L+ LR+ALE +QL + YQP G + EAL+RW P G + Sbjct: 630 FEPRFNDAAKDRMRLERELRQALERNQLSLQYQPVFALPDGRLAGAEALLRWTHPALGSV 689 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTA 512 P FI AE+SGLIVP+G WV+ RQ +W D G++ +AVN+S Q+ + Sbjct: 690 SPATFIPIAEDSGLIVPIGAWVLEQACRQARQWLDAGLDPGVIAVNLSGMQIQRNDLVDT 749 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + VL C +++E++ES + + E L + Q LG + +DDFGTG +SL L Sbjct: 750 VSSVLARTGLPACHLELEISESYITRHAESDLQRLGQLRALGVSMAIDDFGTGQTSLGHL 809 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 R P+ +K+D+ F+ DI + ++ RAI+ + L L V+AEGVESA +++ L Sbjct: 810 RRLPVSKLKIDRSFMADIEHDAAAAAVTRAIIGLGHGLGLTVVAEGVESAAQESALVAQH 869 Query: 633 INERQGFLFAKPMPAVAFERWYKR 656 + QGF +A+P+ A F R Sbjct: 870 CDLVQGFRYARPLDAPVFAALCAR 893 Score = 45.6 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 19/186 (10%) Query: 65 MMSLTVDESDLSVHLVGRKI--NKREWAGNASAWHDTPAVARDL---SHGLS-FAEQVVS 118 + L ++ L+ + ++ + RD LS FA++V+ Sbjct: 25 ALRLEIEALRLANAALESQLLAGSEQAESMFVQLERQRNALRDAHGREQALSAFAQRVMD 84 Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR----EAAASRRNNR 174 ++ LD +G +++ NR C++ G SV L + EAA + Sbjct: 85 TVGGVVIALDPQGRLRQRNRHCQNDLAPLPE---GSSVDLLLHPQDLAALEAALPHLPWQ 141 Query: 175 VF------FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 V R Y E G + + + E + SGTDI+E +R Sbjct: 142 VHSVLFETVRRQGGYRAEHQFAMRDGSYRYHLVEAAMLYSAQNKEEGAVLSGTDISELKR 201 Query: 229 AQERLR 234 ++ LR Sbjct: 202 QEQHLR 207 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 793 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 177/565 (31%), Positives = 303/565 (53%), Gaps = 8/565 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + R L AEQV S + A++I + NI R N+ + TG +VIG++ Sbjct: 575 HINTIKRQQETELKLAEQVFSRSADAMIITNPDNNIVRVNQAFCEITGYTSEEVIGKNPR 634 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L +++ R R G +++ E+W G+ + + + + Sbjct: 635 ILKSEKQDHDFFRSLWRSLELQG-SWQGEIWNRRKNGEIYPEWSSINAVKDASGRVVNYF 693 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLD 275 +D+ +++A L L + D++T LPNR ++D I+ +I HA + +GV++L+LD Sbjct: 694 AVFSDL-LQKKALAELDHLKHYDALTDLPNRALLEDRIESSITHARQYERFIGVIFLNLD 752 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMA 334 +F VND H GDQ+L + ++ ++R D F++ + + + A Sbjct: 753 HFHTVNDMLSHAGGDQVLIATAKRLMDAAPAQASISRLSADTFVIALPDLNTSEEINRTA 812 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG-RGQFC 393 I ++ P + V S +GI++ P G+D+T +++HAD A+ AK+ G R F Sbjct: 813 ELIAQKIYQPLTVADQSVQLSARMGISVYPIDGNDATTLMKHADAALADAKQCGVRNSFR 872 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGL 452 ++ MN+ + L + LR A+ ++LV+HYQP++ G++ EAL+R PERG+ Sbjct: 873 FYSSSMNEHAHKLLTMGAELRNAISQNRLVLHYQPQVDIITGQIIGAEALIRINHPERGI 932 Query: 453 IPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR-DKGINLRVAVNISARQLADQTIFT 511 I P +FIS AEE+GLI+P+G WVI + RQ+ +W DK I L +A+N+S QL + Sbjct: 933 ISPGEFISVAEETGLIIPMGTWVIREACRQMQQWHLDKNIELTIAINLSPLQLHQSDLPE 992 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 + L + +++E TES +++N ++++ +F +G + +DDFGTGYSSLS Sbjct: 993 IVSLALHDSGLNARYLELEFTESAIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYSSLSY 1052 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L +FP+D +K+DQ FV +I + P ++V+AI+A+ + L + IAEGVE+ + +L Sbjct: 1053 LKQFPVDKLKIDQSFVSNITQDPNDAAIVQAIIALGRTLGMTTIAEGVETEAQLGYLRSV 1112 Query: 632 GINERQGFLFAKPMPAVAFERWYKR 656 E QG+L++ P+PA F R Sbjct: 1113 NCKEMQGYLYSAPLPAEEFAALLVR 1137 Score = 43.3 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 59/173 (34%), Gaps = 15/173 (8%) Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 ++ +D + ++ + + R+ A + AW ++ + Sbjct: 254 ILQAIIDSQSIKLNQLQADMLNRQLAESIMAWKRPFLD-------------LLDNLPLKV 300 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 I D+R N N+ D G+++ ++ G+S + + A R ++ S Sbjct: 301 FIKDTRSNYIACNKSYADDLGIQQSEIAGKSDLDFYPAS-LAQHYREDDARVIESDQTIT 359 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + Q H G G + +I D+T E + + L+ A Sbjct: 360 MVGPYLAGSRQTWVQISKSPWHDGRG-DIGGVIGIFQDVTHEYQMNKALQRKA 411 >UniRef50_A4U4R0 Sensory box/GGDEF family protein n=3 Tax=Magnetospirillum RepID=A4U4R0_9PROT Length = 840 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 207/665 (31%), Positives = 329/665 (49%), Gaps = 33/665 (4%) Query: 11 YNF----LGSHNPYWRLTESSDVL---RFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 YN + ++PY + +S +L + E +R L + AE R + I +S Sbjct: 184 YNPAAIRIFGYDPYEIVGKSVGLLIPGVLGKSGQLETERFLDIRAEVVGRRK----IGAS 239 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 + L+++ +L +R + A + A +L + +++ Sbjct: 240 FPLELSLNAMELG--------GQRLFVAIAHDITERKAAEEELRKQKEWLSTLINAMPDL 291 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 + D +G N+ D GL D G++ L R A+ Sbjct: 292 VCFKDGKGKWLVANKFYLDIAGLDHVDYHGRTSADLAHMSRGFGEF--MLTGSLSDERAW 349 Query: 184 E------VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + E +PT G K L+ G D+TE + A R+ LA Sbjct: 350 QEKKPVAYEKELPTPDGGAKVFDVIKIPLYEEDGARRGLVMVGRDVTERKLAAARIHHLA 409 Query: 238 NTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRD 295 + DS+TGLPNR Q+ + A+ A +KV +++LDLD FK +ND GH GD LL+ Sbjct: 410 HHDSLTGLPNRVLFQERLRTALAQAKRLGHKVALMFLDLDKFKDINDTLGHHLGDLLLKA 469 Query: 296 VSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYT 354 V+ +L C+ +AR GGDEF V+ +N +A I+ + PF + EV T Sbjct: 470 VAKRLLRCVRETDTVARLGGDEFAVVLTNLDDPEGASNVAESIIASISEPFGLDEHEVNT 529 Query: 355 SCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLR 414 S S+GI + P+ DS ++++AD AM+ +K GR + + EM+ + ++ +LR Sbjct: 530 STSIGITIFPDDAVDSEVLLKNADLAMFRSKAEGRNNYHFYVAEMDAEIQARKVVEHDLR 589 Query: 415 KALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGR 473 AL DQL +HYQP I GEV EAL+RW+ P RG + P++FI AE + LIVPLGR Sbjct: 590 VALGTDQLEMHYQPLIEMKTGEVVGCEALIRWKHPTRGWVSPVEFIPIAERTDLIVPLGR 649 Query: 474 WVILDVVRQVAKWRDKGINL-RVAVNISARQLADQT-IFTALKQVLQELNFEYCPIDVEL 531 W++ Q W G+ ++AVN+S Q + T + + +L + F + +E+ Sbjct: 650 WILHRSCLQGRDWARAGLPPQKIAVNLSPVQFKNHTALLAMIADILDQTGFPPDQLQLEI 709 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TE ++N E + V++Q +G + +DDFGTGYSSL+ L RFP+D +K+D+ FV DI Sbjct: 710 TEGIAMQNVEATVDVLRQLRDMGVLISIDDFGTGYSSLNYLKRFPVDKLKIDRSFVVDIG 769 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 P + ++V AIV + +L +V EGVE+ ++ FL +G++E QGF FAK +P F Sbjct: 770 LHPDNAAVVNAIVTLGHSLGTRVNVEGVETIEQLDFLKAHGVDEAQGFYFAKALPPDEFA 829 Query: 652 RWYKR 656 R+ + Sbjct: 830 RFVRE 834 Score = 85.7 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 55/185 (29%), Gaps = 7/185 (3%) Query: 52 ARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLS 111 + M I + + + D+ D + + A A+A + Sbjct: 100 GKPEPMQQIVAVKPVVVAEDQRDCLIQVFDVTTMSHREALLRQQARTMQALAENYRLSEL 159 Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 +V AIV G I +N G ++++G+SV L + Sbjct: 160 HNRAIVDNTADAIVTFGEDGAIGTYNPAAIRIFGYDPYEIVGKSVGLLIPGVLGKSGQLE 219 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 R E+ G L + G+ + DITE + A+E Sbjct: 220 TERFL-----DIRAEVVGRRKIGASFPLELSLNAMELGGQR--LFVAIAHDITERKAAEE 272 Query: 232 RLRIL 236 LR Sbjct: 273 ELRKQ 277 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 183/591 (30%), Positives = 301/591 (50%), Gaps = 16/591 (2%) Query: 76 SVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQR 135 VH + + + + ++ ++ + ++ +A AI++ I+ Sbjct: 462 EVHAYPSEEGLTVYFRDITERKESEQARQEAHVRIRQQASLLDKATDAIIVFGMDNCIEF 521 Query: 136 FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQ 195 +N+ E G +V+G+ V L+ A NR SG + EL Sbjct: 522 WNQGAERLYGWTSEEVMGREVEMLY---DNVAVFDEANRALLSSGE-WRGELAQRRRDQS 577 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLI 255 L + + + + TDIT+ + A+ + LA DS+TGLPNR + D + Sbjct: 578 MLNVEAHWTLVRNDDGEPQAIFAINTDITQRKSAENEILHLALYDSLTGLPNRRLLLDRL 637 Query: 256 DHAIN-HADNNKV-GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 HA+ A N ++ ++++DLDNFK +ND GH GD LLR V+ + SC+ +AR Sbjct: 638 GHALAVSARNQRMGALLFIDLDNFKLLNDTLGHDMGDLLLRQVAPRLSSCVRESDTVARL 697 Query: 314 GGDEFLVLA-------SNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEH 366 GGDEF+V+ + + + + + RI + PF + + + S+GIAL + Sbjct: 698 GGDEFVVILMGDFGEDHDEALTQISTICERIRSAFIQPFNLDPYIHHITPSIGIALFNDQ 757 Query: 367 GSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHY 426 + +++ AD AMY AK GR F P+M + L++ L K+ E ++ ++HY Sbjct: 758 SQTTNELLKRADLAMYQAKASGRNAMRFFDPDMQAAMNARAILESELYKSWERNEFILHY 817 Query: 427 QPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW 486 Q ++ RG + EALVRWQ P RGL+PP +FI AEE+GLI+PLG WV+ Q+A W Sbjct: 818 QLQVDSRG-IIGAEALVRWQHPRRGLLPPSEFIPQAEETGLILPLGEWVLETACNQLASW 876 Query: 487 --RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELAL 544 + + + L ++VN+S+ Q + +L + +ELTES L+ + + + Sbjct: 877 ALQPETVQLNLSVNVSSLQFCQPDFVEQVISILDRTGANPQRLKLELTESILVHDMDDTI 936 Query: 545 SVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIV 604 + + G LDDFG GYSSL L R P+D +K+D+ FVRD+ ++VR I+ Sbjct: 937 AKMMTLKARGVGFALDDFGIGYSSLYYLKRLPLDWVKIDRSFVRDVLTDNNDATIVRTIL 996 Query: 605 AVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +A+++ L VIAEGVE+ + FL +G QG+LF++P+P FER+ + Sbjct: 997 LLAKSMGLAVIAEGVETGAQKDFLASHGCTAYQGYLFSRPLPLEQFERFVQ 1047 Score = 70.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 17/150 (11%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 A + A R+LS+ E+++ A LD N+ E+ D++G+ Sbjct: 361 AMEEQQATTRELSNAKLRTERILESITDAFYTLDREWRFTYVNKEAENLLQRNREDLLGR 420 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 ++ F R +R T + ++ +++ + +E Sbjct: 421 VCWEEFKETAGTTFDREYHRALME----------NRTVTFEEFYVPLDEWFEVHAYPSEE 470 Query: 215 FLICSGTDITEERRAQE-------RLRILA 237 L DITE + +++ R+R A Sbjct: 471 GLTVYFRDITERKESEQARQEAHVRIRQQA 500 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 183/590 (31%), Positives = 293/590 (49%), Gaps = 24/590 (4%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS------------AIV-ILDSRGNIQ 134 E W R L +E + ++ AIV + D +G I Sbjct: 662 EGTAAILGWFYDVTDLRRAQDALLLSEALAKQSLEELKYQKYALDKHAIVAVTDVKGRIT 721 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 N + +G +++GQ L + R +G + E+ G Sbjct: 722 YANDKFSEISGYSIEELLGQDHAILNSGYHPKGYFKEMYRTV-ANGQVWHDEICNRAKDG 780 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDL 254 ++ G I TDIT+ + A+++ LA D +T LPNR + D Sbjct: 781 SLYWVDTTIAPFIGDDGKPQSYISIRTDITQRKAAEDKSNYLALYDPLTNLPNRRLLLDR 840 Query: 255 IDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLAR 312 + HA+ A +++LDLD+FK +ND GH GD LL+ V+ + +C+ +AR Sbjct: 841 LTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLLLQQVAECLTACVREGDTVAR 900 Query: 313 PGGDEFLVLASNTSQSALEAMAS------RILTRLRLPFRIGLIEVYTSCSVGIALSPEH 366 GGDEF+V+ S+ +EA A +IL + P++ E + + SVGI L ++ Sbjct: 901 LGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQFKGYEYHITSSVGITLFGKN 960 Query: 367 GSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHY 426 S +++ AD AMY AK+ GR F P+M + + + ++ LRKAL+ ++ + Y Sbjct: 961 NLKSDELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQARVDMEHELRKALDKNEFQLFY 1020 Query: 427 QPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW 486 Q ++ EAL+RW PERGLIPP +F+S AE+ G+I+ +G WVI Q+ +W Sbjct: 1021 QMQVGLSDRAVGAEALIRWIHPERGLIPPNEFVSIAEDCGMILSIGAWVIDTACAQLKRW 1080 Query: 487 R--DKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELAL 544 ++ +L ++VN+SA+Q + + + +ELTES L+++ E A+ Sbjct: 1081 EQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINPMLLKLELTESALLDHIEDAV 1140 Query: 545 SVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIV 604 +++ +G + LDDFGTGYSSL L P+ +K+D+ FVRDI +Q++VR I+ Sbjct: 1141 AIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDRSFVRDIASSIGNQAIVRTII 1200 Query: 605 AVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 A+A LNL VIAEGVE+ + L +G QG+LF++P+P AFE Sbjct: 1201 AMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEPVPIDAFEALL 1250 Score = 43.0 bits (101), Expect = 0.037, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 48/147 (32%), Gaps = 3/147 (2%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS-RGNIQRFNRLCEDY 143 N G + + S+ +++ I + + N E Sbjct: 412 NPTYSRGTVQDVTERQNSEALIRKTESYLTNILNSVEEVIWTASAPDFRVNHVNAAIEKL 471 Query: 144 TGLKEHDVIGQ-SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 GL + +I V+ + + A ++ + F + +E I G ++ + Sbjct: 472 CGLSQQALIDDIEVWINLIHPDDCAQAKLAMKAVFEQSSV-ALEYRIVLADGTVRWVSDS 530 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRA 229 + V G L+C D+T +R A Sbjct: 531 RHVVYGESGESAELVCVIHDVTAKRLA 557 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 791 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 187/592 (31%), Positives = 314/592 (53%), Gaps = 9/592 (1%) Query: 73 SDLSVHLVGRKINKREWAGNASAWHDTPAVARD-LSHGLSFAEQVVSEAHSAIVILDS-R 130 + + +L+ +A + A + +D L + + A+ I Sbjct: 448 DEAAQNLLLEMALDISFALDRFADERERKIMQDDLRDSEERYRKAFQTSPDAVNITRLVD 507 Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIP 190 G N E TG + +V+G++ +L + A R G +E Sbjct: 508 GLYVDVNTGFERITGWRHDEVVGKTATELNLWGNPADR-MRLVDALQSEGRCNNLEATFV 566 Query: 191 TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNA 250 G + + I + DITE++ A+ +++ LA+ D +TGLPNR+ Sbjct: 567 KKNGDIFHGLMSAEKVRFKDVDCI--LSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQ 624 Query: 251 MQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQ 308 + D +A++ A + ++ +++LDLD+FK +ND GH GDQLL DVS + + L + Sbjct: 625 LHDRFRYALSLAQRHGDQLAIMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREED 684 Query: 309 VLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGS 368 L+R GGDEF++L T ++ +A+++L + P +I E+ ++ S+GIAL P G Sbjct: 685 SLSRLGGDEFILLLPGTDEAQASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQ 744 Query: 369 DSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQP 428 D + ++AD AMY K+ R F FT EM L L LR AL + +H+QP Sbjct: 745 DFETLSKNADAAMYRVKQASRNDFRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQP 804 Query: 429 KITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR 487 ++ + G + EAL+RW+ PE G+I P +FI AE+SG I+ +G WV+ VRQ+ +W Sbjct: 805 QVALQDGHIVGAEALLRWRHPELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWL 864 Query: 488 DKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSV 546 D G+ + +AVN+SA Q + + ++L E +++ELTE+ +++ A+++ Sbjct: 865 DAGLRPMVIAVNLSAVQFRHPNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAI 924 Query: 547 IQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAV 606 + + + G ++ +DDFGTGYSSLS L +F ++ +K+DQ FVRDI P +++V AI+ + Sbjct: 925 MNKLDEHGIRMSIDDFGTGYSSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINL 984 Query: 607 AQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 A +L + IAEGVE+A + AFL G +E QG+ +KP+P FE + + + Sbjct: 985 ASSLGMHTIAEGVETASQLAFLRLQGCDEVQGYYVSKPLPKDQFEAFVRNSI 1036 Score = 44.1 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 20/131 (15%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL--KEHDVIGQSVFKLFMSRREA-- 166 + + + D G +++G+++ ++ Sbjct: 188 QRLQSTLDALPDLLFETDMDGRYLA----------YHSPRSELLGKTLHRVLPVAVADIC 237 Query: 167 -AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 AA N V + G ++ L G F G F++ S DITE Sbjct: 238 LAAVHEANAVGYSHGKQIQLAL----PDGAHWFELSASRKPGLPGDAPTFIVLS-RDITE 292 Query: 226 ERRAQERLRIL 236 ++A+ ++ L Sbjct: 293 RKKAEIKIERL 303 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 186/572 (32%), Positives = 308/572 (53%), Gaps = 9/572 (1%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 D RD + + + ++ S+++I D + I+ NR TG ++IG+ Sbjct: 245 IDDVTRRERD-EAEIRKFSKAIDQSPSSVLICDRQWRIEYANRKFSQLTGNSPSEIIGKH 303 Query: 156 VFKLFMSRREAAASRRNN---RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 L ++ +R+ R+ + ++ E+ G+R + + Sbjct: 304 PSSLIDPGVDSHEARQLWKSIRLQVQRVGVWQGEVNSTRKNGERYWEQLVVTPIKDNNGE 363 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVV 270 + G DI+ +R +++L AN D +TGLPNR D + A+ A +KVGV+ Sbjct: 364 STGYLILGEDISIRKRYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVM 423 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL 330 +LDLDNFK +ND GH GD LL + + I SCL +AR GGDEFLV+ + Sbjct: 424 FLDLDNFKHINDTLGHDAGDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDA 483 Query: 331 E-AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 +A RIL PF + EV+ + S+GIA P+ +S +++HAD AMY AK G+ Sbjct: 484 SSQVAERILKTFAPPFMLSGQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAKHKGK 543 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSP 448 + FTPEM++ E L +++++RKALE + +++QP + G + + EAL+RW +P Sbjct: 544 SAYARFTPEMSEVSHERLQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRWNNP 603 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQ 507 G++ P FI AEE+GLI+P+G WV+ + + W+ G + +AVN+S RQ D Sbjct: 604 AMGMVMPDRFIPLAEETGLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQFRDP 663 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 A+ + L + N +++E+TE +++N +++Q ++G ++ +DDFGTGYS Sbjct: 664 GFTDAIMRALNDSNLRPELLELEITERLILDNSIETADILKQLDKVGIRLSVDDFGTGYS 723 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 +LS L +P D +K+D+ FV+D+ K+ SLVRAI+ +A +L L+V+AEGVE F Sbjct: 724 ALSYLKSYPFDTLKIDKSFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHF 783 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 L + QG+ +++P+P F W + + Sbjct: 784 LKAEHCDYSQGYFYSRPLPEQDFIHWLETNER 815 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 188/588 (31%), Positives = 309/588 (52%), Gaps = 13/588 (2%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGL----SFAEQVVSEAHSAIVILDSRGNIQRFNR 138 + E + R+ L A + ++ D + + N Sbjct: 160 QQRTAELEEINRLLKLEIDLRREAEQTLYAEKQRAVVTLQSIGDGVITTDKQSRVNYLNP 219 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN--RVFFRSGNAY--EVELWIPTCKG 194 + E TG + G+ + ++F E++ N V + G Y + G Sbjct: 220 VAERMTGWSNAEAQGKPLLEVFRIVNESSRKLVPNPVDVVLQHGEIYGLANHTALIGRHG 279 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDL 254 + + N + ++ D++E R ++ LA D +TGLPNR + D Sbjct: 280 NEYAIEDSAAPIRDQDGNVLGVVLVFHDVSEARNMANKMTYLAEHDYLTGLPNRLLLNDR 339 Query: 255 IDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLAR 312 ++ A+ A ++ + +++LDLD+FK +ND+ GH GDQLL+ V+ + SCL ++R Sbjct: 340 LNQALTIARRDQEFIALMFLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISR 399 Query: 313 PGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDST 371 GGDEF++L + + +A ++L +P+ IG E+ S S+GIA+ P+ G + Sbjct: 400 QGGDEFMILLPELTNYFSPAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGE 459 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 + ++AD AMY AK GR + FT MN+RV E L++ LR+A+E ++ V++YQPKI Sbjct: 460 LLTKNADAAMYHAKSLGRNNYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKID 519 Query: 432 WR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 R G+V EAL+RWQ P GL+ P FI AE+SGLI P+G WV+ + RQ +W+ G Sbjct: 520 IRTGQVVGAEALIRWQHPSWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAG 579 Query: 491 I-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 + + VAVN+S QL + ++L E +++E+TES I + ++ + + Sbjct: 580 LARIPVAVNLSTVQLRQHNFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHK 639 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 +G ++ LDDFGTGYSSLS L R PI+ +K+D+ F+RDI P +++ AI+ ++ Sbjct: 640 LRSMGVKLALDDFGTGYSSLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHG 699 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 L L VIAEGVE+ + FL K G ++ QGF+ ++P+PA F + + Sbjct: 700 LRLNVIAEGVENINQLEFLKKEGCDQMQGFIASRPVPADEFALLLQNW 747 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 179/597 (29%), Positives = 294/597 (49%), Gaps = 22/597 (3%) Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVV----------SEAHSAIVILDSRG 131 + +R A + A +V + I +D Sbjct: 397 DEAAQRLLVEMAMDIDFALDRFEQDAERARLAAAIVDSEEKYRELTESINDVIWTVDPET 456 Query: 132 N-IQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF-------RSGNAY 183 + +G H++I + +L A R +S + Sbjct: 457 RCFSYVSPAMRRLSGYAPHELIDAPIERLLKPEYVAEMRERMALHLAEFHVGKRKSEDYS 516 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E+ + G ++ + + DI+E R A+ ++ LA+ D +T Sbjct: 517 VEEVELGRRDGGTVWAEVVTTLGLNRRSGRVEFRAVARDISERRAAEAEIQRLAHYDQLT 576 Query: 244 GLPNRNAMQDLIDHA--INHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 GLPNR+ ++D +A + ++ V++ DLD+FK +ND GH FGD+LL +V+ + Sbjct: 577 GLPNRSLVKDRFRYAASLTQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLE 636 Query: 302 SCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 S L + R GGDEF+ L +T +A+++L + P + E+ + S+GIA Sbjct: 637 SVLRGGDTVCRLGGDEFVFLLPDTDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIA 696 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 + P+ G+D + R+AD AMY AK GR F FT M R L L LR AL+ Q Sbjct: 697 MYPDDGTDFDTLSRNADAAMYQAKREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQ 756 Query: 422 LVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 +HYQP+++ G V EAL+RW PE G + P +F+ AE +GLI +G WV+ + V Sbjct: 757 FSLHYQPQVSLADGRVVGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAV 816 Query: 481 RQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 Q +W D+G+ L +AVN+SA Q + + + QV++E +++ELTE+ +++ Sbjct: 817 AQSRRWLDEGLPPLVMAVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDD 876 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 + A+ V+ G ++ +DDFGTGYSSL L RF + +K+DQ FVRDI P +++ Sbjct: 877 PQSAVRVMDALFARGIRMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAI 936 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 V AI+ +A +L + +AEGVE+ + FL + G + QG+ F++P+PA AF + + Sbjct: 937 VSAIIHLAGSLGMLTVAEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYLQE 993 Score = 48.7 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 9/155 (5%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + G A R+L + + +D G + E Sbjct: 104 GALLFGGVLLLRARVRARTRELEGVNRQLGATLDAIPDLLFEMDGEGRYLAVHANREAQL 163 Query: 145 GLKEHDVIGQSVFKLFMSRREA---AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 ++G+ V ++ + AA R + SG ++E+ I Q + Sbjct: 164 QRPVEALLGRRVDEVLPAPAAQTCLAALAEAGRHGWSSGQ--QIEITI---DNQPQWFEL 218 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 + + G F++ S DIT RRA+ ++ L Sbjct: 219 SVARKADDGGPAHFIVLS-RDITARRRAEASVQRL 252 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 187/572 (32%), Positives = 300/572 (52%), Gaps = 6/572 (1%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 G + L + A I N G Sbjct: 128 GFIQDVTERKQADEALREAERRYRSIFENAIEGIYQSTPSDGYLAVNPALARMYGYDSPQ 187 Query: 151 VIGQSVFKLFMSRR-EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS 209 + ++ + + R+ + G E + G+ +++ N S Sbjct: 188 ALISTLRDIDNQVYVDPQRRLEFKRLMAKHGVVTNFESRVHRRNGEVIWISENARSVYNS 247 Query: 210 GKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKV 267 +F + ITE + + ++ A D++TGLPNR + D + A+ H++ Sbjct: 248 DGTLLFFEGTVEAITERKLHEAEIQFQATHDALTGLPNRTLLYDRMQQAVLHSERYGKLT 307 Query: 268 GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TS 326 + +LDLD FK +ND+ GH GD+LL+ + + SCL +AR GGDEF++L ++ + Sbjct: 308 AIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLRESDTVARQGGDEFVLLLTDQPN 367 Query: 327 QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKE 386 + A+ R+L + P++ +E +CS+G+ L P+ G D+ ++++AD+AMY AKE Sbjct: 368 EEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCPDDGRDAETLLKNADSAMYKAKE 427 Query: 387 GGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRW 445 GR F F+ EMN V + L L LR+A+ N+ V+HYQPK++ ++ EALVRW Sbjct: 428 LGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVLHYQPKVSLASHQIIGAEALVRW 487 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQL 504 S G++ P FI AEE+GLI+PLG WV+ RQ W+D G + ++VN+S RQL Sbjct: 488 NSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQNRAWQDAGYPPIPISVNLSPRQL 547 Query: 505 ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGT 564 A I ++++L E E +++E+TES + + E + +++ Q LG ++ LDDFGT Sbjct: 548 ARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEKSFALLTQLRSLGVKISLDDFGT 607 Query: 565 GYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE 624 GYSSLS L RFP+D +K+DQ FVRDI S ++V+AI+++ + LNL V+AEG+E+ + Sbjct: 608 GYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKAIISLGRNLNLTVLAEGIETEDQ 667 Query: 625 DAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 FL NG +E QG+L +KP+P F + Sbjct: 668 FQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 Score = 55.7 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 6/135 (4%) Query: 105 DLSHGLSFAEQVVSEAHSAIVI---LDSRGNIQRFNRLCEDYTGLKEHDVI--GQSVFKL 159 D + +++ +V LD+ ++ + C TG E D++ + + Sbjct: 11 DPTLQARLLSTLLAN-LEGMVYRCRLDAHWTMEFVSEGCFALTGYTEEDLLFNSRVSYDQ 69 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 + R R+ +++E I G ++ S K L Sbjct: 70 ITHPDDRRHVRDTILEAVRNNRRFDIEYRIVRADGSIRHVWERGTNISHDNKAWDILEGF 129 Query: 220 GTDITEERRAQERLR 234 D+TE ++A E LR Sbjct: 130 IQDVTERKQADEALR 144 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 189/577 (32%), Positives = 303/577 (52%), Gaps = 13/577 (2%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQ----VVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 G H + + H Q ++ A AI+ LD+RG + N G Sbjct: 249 GRERQLHQMASETQQALHQARQLGQEQQMILDAAADAIIGLDNRGRVTFSNPAATALFGY 308 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRN----NRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 ++ G+ + L +E A R R+ G + + G L + N Sbjct: 309 SAEELQGEDLHALIHLCKEGEAHPREECGLWRLLRFGGQYHSGHETLRHKDGTPLPVEMN 368 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA 262 I + + DI+E ++ L A+ D +TGL NR ++ + A Sbjct: 369 GSAIDDEKGVVIGAVLTFRDISERLSYEQELERRAHYDELTGLANRVLLKARLQQTTAQA 428 Query: 263 DNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV 320 + V V++LDLD+FK VND GH GD+LL ++ + + + +AR GGDEF++ Sbjct: 429 HRHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQTVVREADTVARHGGDEFVI 488 Query: 321 LASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADT 379 + S + R+L R+ P I E+YT+ SVG++L P G+D ++R+AD Sbjct: 489 VLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTASVGVSLFPRDGTDVDTLLRNADA 548 Query: 380 AMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRS 438 AMY AK GR ++ EMN + + L + + LR+A+E ++L +HYQP+ + G + Sbjct: 549 AMYRAKHLGRNNLQFYSEEMNLSLSKRLRMLSQLRQAVERNELCLHYQPQASLPGGRLLG 608 Query: 439 LEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAV 497 +EALVRWQ PE G++ P +FI AEESGLI P+G WV+ + RQ W G LR++V Sbjct: 609 VEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREACRQGVAWDRAGFMPLRISV 668 Query: 498 NISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQV 557 N+SARQ + + ++ VL++ +++ELTE+ LI N + ++ + LG ++ Sbjct: 669 NLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIANPQQSVQRLSAIRDLGVRL 728 Query: 558 HLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAE 617 LDDFGTGYSSL+ L R+ D IK+D+ FV D + P + ++VR ++A+A+ L + IAE Sbjct: 729 ALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAAIVRTVIAMARLLGSETIAE 788 Query: 618 GVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 G E+A+ FL +NG + QG+ ++P+PA E+ + Sbjct: 789 GAETAETITFLGRNGCDAVQGYYISRPLPAGEIEQLF 825 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 789 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 195/608 (32%), Positives = 320/608 (52%), Gaps = 6/608 (0%) Query: 57 MTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQV 116 +T +++ L V + R +A ASA + + L F + + Sbjct: 63 LTDAAGNVLGPLAVLSRRPLGDSELAETMLRIFAARASAELERTKAEQARREQLHFLQVL 122 Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 + I D+ N E + G ++IG++VF + R A +R Sbjct: 123 IDSIPHPIFYKDADRRYIGCNAALESFIGRTREEIIGKTVFDIGAEGR-ARICDAVDRKL 181 Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 +G + + G + +K V + + ++ + DITE +RA+E ++ L Sbjct: 182 LANGGVESYDSTMIHTDGSIRDIIFSKTVFGNTDGSIGGIVGTILDITERKRAEEAIQQL 241 Query: 237 ANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLR 294 A D++TGLPNR ++D + ++ A GV++LD+D FK VND+ GH GD LL Sbjct: 242 AYFDALTGLPNRTLLRDRVSQLLSQARREGGGFGVLHLDVDRFKGVNDSLGHACGDVLLS 301 Query: 295 DVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVY 353 V+ I S + +AR G DEF+V+ + + A+ +I+ L P I +++ Sbjct: 302 TVAGRIASSIRESDTVARLGSDEFVVILPGVGHEEDVVAVVRKIVEELNRPIVIQGNDIF 361 Query: 354 TSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNL 413 + S+GIA+ P GS + ++++AD AM+ AKE G + ++ E+N R E L L+T+L Sbjct: 362 CTASIGIAIYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERLTLETSL 421 Query: 414 RKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLG 472 R+ALE + ++HYQP + G + +EAL+RW SPE G++ P FI AEE+GLIVP+G Sbjct: 422 RRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVPIG 481 Query: 473 RWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVEL 531 WV+ Q+ + G L V+VN+SARQ + VL + + +++EL Sbjct: 482 EWVLRSACEQLRALHELGYTELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRYLELEL 541 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TES ++E E A ++++ Q+G + +DDFGTGYSSLS L FPID +K+D+ FV+++ Sbjct: 542 TESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEVT 601 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 + ++ AIVA+A LNL V+AEGVE+A++ AFL + QG+ A+P+P Sbjct: 602 VDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLPPRNLL 661 Query: 652 RWYKRYLK 659 + + + Sbjct: 662 EFLEARQE 669 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 200/611 (32%), Positives = 324/611 (53%), Gaps = 22/611 (3%) Query: 54 IREMTVITSSLMMSLTVDESDLSVHL-VGRKINKREWAGNASAWHDTPAVARDLSHGLSF 112 + +++ + L + +D L H+ I++R+ +A L Sbjct: 218 RADGSIVWARLNAAAMLDGLHLRGHVQTVEDISERKITEDA------------LFEEKER 265 Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV----FKLFMSRREAAA 168 A+ ++ A++ + +G++ N + E TG IGQ + L + RE A Sbjct: 266 AQVTLNSIGDAVLTTNLKGDVTYLNLVAEMMTGWPREAAIGQPLSEVFRILNGTTREVAP 325 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 + + + + G + + + D++E R Sbjct: 326 NPAQLAIRENRTVGLAADSILIHRDGLEAAIEDSAAPIHNRDGQVAGAVIVFHDVSESRA 385 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGH 286 ++ LA D +TGLPNR + + + AI A + +VG+++LDLD FK +ND+ GH Sbjct: 386 MALKMAHLAQHDFLTGLPNRALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGH 445 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPF 345 GDQLL+ V+ ++ C+ + R GGDEF++L + Q+ +A ++L P Sbjct: 446 AVGDQLLQQVAERLIVCIRDTDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPC 505 Query: 346 RIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 I E++ S S+GI++ P+ G D+ ++++ADTAMY AK GR + FT EMN R Sbjct: 506 LIAGNELHVSLSIGISIYPDDGMDADTVMKNADTAMYHAKANGRNNYQFFTTEMNTRAVR 565 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 L+++ NLR+AL + +++YQPKI G + EAL+RWQ PE GL+ P F+ AEE Sbjct: 566 RLFIEGNLRRALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEE 625 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFE 523 SGLIVP+G WV+ + RQV W++ G+ + V+VNISA + + + +L+E Sbjct: 626 SGLIVPIGSWVLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGML 685 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 +++ELTES L+ + E + +V++ +G Q+ +DDFGTGYSSLS L RFPI+ +K+D Sbjct: 686 PSYLELELTESILMHDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKID 745 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 Q FV DI P S+V A++ + + L +V+AEGVE+ ++ AFL +E QGFLF + Sbjct: 746 QSFVHDIAIDPDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGR 805 Query: 644 PMPAVAFERWY 654 P+PA F R Sbjct: 806 PLPADEFARLL 816 Score = 62.2 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 59/190 (31%), Gaps = 13/190 (6%) Query: 55 REMTVITSSLMMSLTVDESDLSVHLVGRKINKREW-AGNASAWHDTPAVARDL------S 107 +++ + ++ ++ + D V + + ++ H P R L Sbjct: 72 EQVSRLAANALILILSSADDEEVARLAVQNGADDYLVKGLVDAHWLPRTLRYLIERKTTR 131 Query: 108 HGLSFAEQVV----SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 L+ +E + I + D G N +GL +G + + + + Sbjct: 132 QALTLSEARFRAMSDASPLGIFVSDIHGECVYTNAAYHKISGLNLEQTLGTN-WSMAIHP 190 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 + R ++ E G ++ N G + + + DI Sbjct: 191 DDRQRVLLEWRAAALGEATFQTEARFLRADGSIVWARLNAAAMLD-GLHLRGHVQTVEDI 249 Query: 224 TEERRAQERL 233 +E + ++ L Sbjct: 250 SERKITEDAL 259 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 788 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 191/567 (33%), Positives = 304/567 (53%), Gaps = 13/567 (2%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + L L +V + I I+D++ I N TG +++G +L Sbjct: 492 LKQLEQRLELWAKVFETSSEGIFIVDAQQRILTANWALTRSTGHDLIELMGGDPAELLAG 551 Query: 163 RREAAASRRNNRVFF---RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 A +R+ + ++ +++ E+ I G + + +C+ Sbjct: 552 ----ADARQTWQSLVERVQTRGSWQGEVRICRRAGGDYPAWLLANAVRDRAGHVSHWVCT 607 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNF 277 DIT+ + ++ R+R LA D +T LPNR + + A+ A KV V+++DLD F Sbjct: 608 SIDITDRKESERRIRFLAEHDVLTELPNRALCIERLRLALQQARRTGQKVAVLFIDLDRF 667 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMA-S 335 K +ND+ GH GD LLR V+ ++ + ++R GGDEF+V+ + + + + Sbjct: 668 KNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFVVVLNGLADIEEVAHVVEQ 727 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 R++ R+R P + E++ SCSVGI++ P+ D ++R AD AMY AK GR F Sbjct: 728 RLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMYQAKAQGRNGAQFF 787 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIP 454 T EMNQR L ++ +LR A+ QL +HYQP+I G V +E L+RW SPE G +P Sbjct: 788 TAEMNQRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVEGLLRWHSPELGHVP 847 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTAL 513 P FI AEE+GLI+ +G WVI Q+ +WR +G+ + V++N+SA QL D + L Sbjct: 848 PDRFIPVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVAVSINLSALQLRDPGLLDVL 907 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 + L+ +++ELTES L++ + L + +LG ++ +DDFGTGYSSL+ L Sbjct: 908 RASLERHAVPPGQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYSSLNYLT 967 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RFPID +K+D+ FVRD+ P ++++AI+ + L L+V+AEGVE E L G Sbjct: 968 RFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQALRAAGC 1027 Query: 634 NERQGFLFAKPMPAVAFERWYKRYLKR 660 +E QG+ FA+PM A W +++R Sbjct: 1028 DELQGYHFARPMAADTATAWLLDWIRR 1054 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 788 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 201/581 (34%), Positives = 314/581 (54%), Gaps = 9/581 (1%) Query: 83 KINKREWAGNASAWHDTP---AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRL 139 + +R+ AG T + R A V A I ILD + NR Sbjct: 373 RAVERDAAGRVRRMLGTRRDVSARRQQEQEQRLAATVFEAASEGIFILDPDYRVLAVNRA 432 Query: 140 CEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFL 199 TG +V+G++V L SR E + R +++ EL G+ Sbjct: 433 FSAVTGYSREEVVGRTVTSLIGSR-EMRRQYQMIRQELDGSGSWQGELIETRKSGELYPQ 491 Query: 200 FRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI 259 + + + ++ D+T R A+ERLR L++ D +TGL NR+ ++ + A Sbjct: 492 WLQLNLVRDASGRPSHIVGFFADLTARREAEERLRYLSHYDELTGLANRSLFKERLHEAS 551 Query: 260 NHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDE 317 A + +V++DLD FK +ND+ GH DQLLR +S + + +AR GDE Sbjct: 552 QRARQSGRSIALVHIDLDRFKLLNDSLGHEVADQLLRQMSRRLTQAVPEADCIARLSGDE 611 Query: 318 FLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRH 376 F +L S S+L +ASR+L +LRLP +G E+ S S+GI+L P++ + A+I Sbjct: 612 FAILLDAYGSLSSLARVASRLLAKLRLPMDVGGHELVVSASLGISLLPDYAREIGALISQ 671 Query: 377 ADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGE 435 A+ A+ AK G F FT + E L L+ LRKA+E QL + YQPK+ + Sbjct: 672 ANMAVQHAKHLGGNTFQFFTDNLQACTLERLQLENQLRKAIEEGQLEVFYQPKLNLADDQ 731 Query: 436 VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLR 494 + + EALVRW+ P++GL+ P +FI AEE+GLI P+G +V+ RQ +W+ +G+ +R Sbjct: 732 LNAAEALVRWRHPQQGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQWQQQGLAEIR 791 Query: 495 VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLG 554 V+VNIS QL + + ++QVL+E +++ELTES L++N + + +Q +LG Sbjct: 792 VSVNISVYQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVVVTFRQLRELG 851 Query: 555 AQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQV 614 ++ +DDFGTGYSSLS L RFP+ +K+DQ F+RD+ ++ RAI+A+A +L L+V Sbjct: 852 VKLAIDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAIIAMAHSLELKV 911 Query: 615 IAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +AEGVE+ + FL +E QG+L ++P+ A AF + Sbjct: 912 VAEGVETQAQMDFLKSQNCDEIQGYLISRPVEAAAFAELLR 952 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 195/601 (32%), Positives = 313/601 (52%), Gaps = 7/601 (1%) Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 ++ VD L + + + D + L +V I Sbjct: 146 QTIEVDGRHLQIIVSDITDAHQNSIKKVVICFDVTQ-QKKTEASLGLYGKVFESTAEGIA 204 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I DSR + N TG + +++G++ L S AA + + Sbjct: 205 ITDSRMRFLQVNEAYCRITGYSDGELLGRTPRML-KSGHHDAAFYADISKTLEVRGHWRG 263 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+ T G+ + L + V + I TDI+ + Q RL LA+ D +T L Sbjct: 264 EILDRTRDGRVIPLLQTISVVRDTQGAVSHYITIVTDISSIKETQSRLDFLAHHDPLTEL 323 Query: 246 PNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR ++HAI+ A N+ G++++DLD FK +ND+ GH GD+LL V+ + Sbjct: 324 PNRLLFTARLEHAIDWAVRNQAHFGLLFIDLDRFKTINDSLGHQLGDRLLVQVARRLRGL 383 Query: 304 LEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 + +AR GGDEF+VL + E +A +++ +R PF + E++ CS+GI L Sbjct: 384 VRKSDTIARLGGDEFVVLVEGIHNAGEAELLAEKLVHAMRQPFFLEETELHIGCSIGITL 443 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 PE G D ++++AD AMY K+ GR FC F+ ++ + V E L L+T LR+AL +QL Sbjct: 444 YPEDGEDPVTLLKNADAAMYRVKDFGRDGFCKFSQDLAEAVDERLALETALRQALRENQL 503 Query: 423 VIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 +HYQP I +G + ++EAL RW+ ERG I P FI AEE+ LI+PLG W+ + Sbjct: 504 QVHYQPVIDLAQGRMVAVEALARWRHAERGEIAPCSFIRLAEETKLILPLGGWMARTAIG 563 Query: 482 QVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Q WR++G+ L V++N S +L D L + L E E + +ELTE+ L+++ Sbjct: 564 QFRLWRERGMELDYVSINTSGIELFDPGFVDGLFEALDEHGLEGRHLQIELTENVLMQDY 623 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 E V+ + Q G ++ +DDFGTGYSSL+ L + PID +K+D+ F++D+ P ++V Sbjct: 624 EACRRVLLRLRQQGVRIAIDDFGTGYSSLAYLKQLPIDMLKIDRSFIKDVPGDPGDCAIV 683 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 I+A+A L L +AEGVE+ +++ +L G QG+ +A+P+ V+ ER + +++ Sbjct: 684 ETIIAMAHRLGLATVAEGVETEEQEDYLLAIGCERLQGYRYARPLDPVSLERLHADSVRQ 743 Query: 661 A 661 A Sbjct: 744 A 744 Score = 48.7 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 17/184 (9%) Query: 52 ARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLS 111 A+I +M + +L + + + L I + S HDT + Sbjct: 21 AKIDQMLTLIGTLPLRPEELDDRTLIDLDPIGIVSDAFGQILSHLHDTNQKLDVARQEIR 80 Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNR-LCEDYTG-LKEHDVIGQSVFKLFMSRREAAAS 169 + +A+V+++ G+I NR E G L +IG+ + +L RE Sbjct: 81 ---AIFDSMDAAVVVVNHDGSIDDCNRQAREWLFGDLDAQMLIGRPLAELCPCDREIQQ- 136 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 +V G +E+ G+ L + + + + +N I + D+T++++ Sbjct: 137 ----QVMSGRGRGQTIEV-----DGRHLQIIVSDI--TDAHQNSIKKVVICFDVTQQKKT 185 Query: 230 QERL 233 + L Sbjct: 186 EASL 189 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 787 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 175/552 (31%), Positives = 292/552 (52%), Gaps = 6/552 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 LS A ++ EA I++ DS G+I N E TG + +V+G+ L + Sbjct: 38 LSIAHTIIQEADEGIIVTDSEGHILLANPAFETVTGYTQEEVLGKKPNILRSGLHDRK-F 96 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 N R ++ E+W G+ + N + +D+T+ +R Sbjct: 97 YENMWETIRDHGVWKGEIWNKRKNGELFVEWLTIKAVYDVAGNPTHYVAIFSDVTQHKRT 156 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHL 287 E+L L+N D +T +PNR + H ++ A ++ +++LDLD FK +ND GH Sbjct: 157 MEQLARLSNYDLLTNVPNRQLFTKRLQHLLDTARRYNQQLAILFLDLDRFKYINDELGHY 216 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFR 346 GD LL+ V+ + L LAR GGDEF+V+ ++A +I+ L+ PF Sbjct: 217 SGDILLQKVANRLKKLLRTKDTLARIGGDEFVVILPKLKDIQEAVSIAEQIIESLQAPFL 276 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 + ++Y S S+GI++ P G D ++R AD AM AKE GR +F ++T +++ + E Sbjct: 277 LHHKDIYISASIGISVYPNDGDDGEMLLRRADRAMQKAKESGRNRFELYTAKLDYQS-EV 335 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEES 465 + L+ LRKA+E ++L + YQP + + + + +LEAL+RW+ P G + P FI AEE+ Sbjct: 336 VTLENYLRKAIERNELFVCYQPIVNIKTKKIEALEALMRWKQPNIGFVSPAQFIPLAEET 395 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 GLIVP+ +W+ + ++++ +NISA L ++++ + Sbjct: 396 GLIVPMTKWLFEQACVHIKAIHQFAPHVKIGINISAVHFQQDDFVQQLSTIVKKHDVHPR 455 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 +ELTES ++ N E ++ + Q Q G ++ +DDFGTG+SSLS L RFPID +K+DQ Sbjct: 456 FFKLELTESTIMPNAEESVQKLVQLKQCGFKLAIDDFGTGFSSLSYLHRFPIDILKIDQS 515 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 F+R + ++V I+ +A L+L V+AEGVE+ ++ FL K + QG+ AKPM Sbjct: 516 FIRRLSLYSDDATIVSTIIMMAHHLHLSVVAEGVETEQQYEFLNKQQCDMAQGYYIAKPM 575 Query: 646 PAVAFERWYKRY 657 P +++ + + Sbjct: 576 PIDEVQQFVQEW 587 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 189/586 (32%), Positives = 306/586 (52%), Gaps = 5/586 (0%) Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 LS+ + +I + + L A +++ + I+I S I Sbjct: 245 VLSLEHLIHEIESAYCSELEKVLVQRDLALQHSQRNLYLANKIIDSSLDGIMITHSNSTI 304 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 + N TG KEH+VIG+ L R + + + ++G ++ E+ Sbjct: 305 MQVNPAFTQLTGYKEHEVIGKCPSILSSGRHDKSFYIKMWDAINKTG-VWQGEICNRKKN 363 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G + ++ +DITE + A++++ LA D +TGLPNR D Sbjct: 364 GDIYIEWLTIIEIKEPNNSDAIYAAIFSDITERKNAEDKIVQLAYFDELTGLPNRRLFND 423 Query: 254 LIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 + A+ A + + V+++DLD FK+VND+ GH GD LL V+ I + L LA Sbjct: 424 RLKMALAAAHRDQHLLAVMFIDLDRFKEVNDSLGHSAGDCLLTLVAARIEATLNEGDTLA 483 Query: 312 RPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDST 371 R GGDEF+VL A+ ++A +IL L PF++ +EV + S+G A+ P+ G DS Sbjct: 484 RLGGDEFVVLCEINKIDAVASLADKILNNLNSPFQLDHVEVGVTASIGAAVYPDDGLDSE 543 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 +++HAD AMY +K+ GR F +F P MN R E L + + + AL+N++ +++QPK Sbjct: 544 TLLKHADIAMYRSKDVGRNSFQLFKPSMNARSLERLAMMSRFQHALDNNEFELYFQPKQC 603 Query: 432 WRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 + ++ +EAL+RW P+ G+I P FI AEE GLIV L WVI + + W+ +G Sbjct: 604 LKSEQIMGVEALLRWHDPDLGMISPAQFIPLAEELGLIVRLDLWVINQAGKVLTLWQKEG 663 Query: 491 I-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 + R+A+NISA L+ + + +L+ N +++ELTES I + A + +QQ Sbjct: 664 LVAGRLAINISACHLSQGKLANNIGTMLKHYNLPGSLLEIELTESSFISSFTQAKTQLQQ 723 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 +LG + LDDFGTGYS+LS L + P D +K+D F+ I + + +V A++A+A Sbjct: 724 LKKLGVHIALDDFGTGYSALSYLTKLPFDTLKIDASFIAKIPDEYGNSQIVAALIALASN 783 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 LNL V+AEGVE + +L G N QG+ + +P+ + +Y+ Sbjct: 784 LNLMVVAEGVEQPAQKNYLISLGCNVIQGYYYCRPLTQRQWFDFYR 829 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 786 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 195/569 (34%), Positives = 295/569 (51%), Gaps = 5/569 (0%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 G A+ D D GL A +V + AI + D I N E TGL + Sbjct: 234 GRVYAFRDITQRLHD-EQGLKLAARVFEASLDAIFVTDPEFRIVAVNPAGERMTGLAGAE 292 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 ++GQ + + + R ++ E+ G + + Sbjct: 293 LVGQRLDRSLR-LWANETLDPDIRAALDRSGHWQGEIEQHHADGSTFPCLVSLMRVLDTE 351 Query: 211 KNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVG 268 + D++E A++R+ LA D++TGLPNR + + ++ +I A + Sbjct: 352 GLPFHYVGFVKDLSETVEARQRIEQLAFNDALTGLPNRLRLTERLEFSIELARRENTRFA 411 Query: 269 VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS 328 V+++D+D FK +ND+ GH+FGD++L +V+ I CL H +AR GGDEF++L Sbjct: 412 VLFIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLRHVDTIARLGGDEFVLLLHRVESH 471 Query: 329 ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 E +A R+L + PF + ++ SCS+GIAL PE G +I++AD+AMY KE G Sbjct: 472 GAELVARRLLESMAQPFELDGLKFSLSCSIGIALYPEDGETLDDLIKNADSAMYHVKEHG 531 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQS 447 RG C + +MN + E + +D +R+AL+ + YQP+I G V EALVRW Sbjct: 532 RGDCCFYQRQMNVGLLERVRIDHAMREALQQGHFWLAYQPQIDLVSGLVIGAEALVRWND 591 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQ 507 P+ G + P FI AEE+G IV LG WV+ + +RQ A W+ +GI L ++VN+SA Q Sbjct: 592 PDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGAHWQAQGIRLSLSVNVSATQFHQA 651 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 L Q L E +++ELTES LI+N E L ++ LG ++ +DDFGTGYS Sbjct: 652 NFIDLLAQWLDETGLPPGRLELELTESILIQNVEETLRRLENLVALGVRLAIDDFGTGYS 711 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SL+ L RFPI +K+D+ FV DI ++ A++ +A L L+VIAEGVE+ + F Sbjct: 712 SLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVIGLASVLKLRVIAEGVETDIQRQF 771 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYKR 656 L G +E QG+L A + AF + Sbjct: 772 LLDAGCHEFQGYLCAPALEPAAFLARIAQ 800 Score = 58.4 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 5/126 (3%) Query: 112 FAEQVVSEAHSAIVILD-SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 A+ ++ E A+ ++D S + NR E+ G ++G+S+ +L + + Sbjct: 7 LAQALIDELIDAVWLVDGSDQRLLAVNRAAEELLGQGRASLVGRSMSELACTPEDLFFWE 66 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 V G+ E + G + + R S ++L C ++ +E R + Sbjct: 67 D---VAAGRGDTLLSETLLRRQDGTLVTVLRRVGRVSCPDGRCLYLAC-FSNQSERRAVE 122 Query: 231 ERLRIL 236 L L Sbjct: 123 SELEKL 128 Score = 51.8 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 47/149 (31%), Gaps = 18/149 (12%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + AV +L ++ + + I++ D G I+ FN+ + + Sbjct: 117 ERRAVESELEKLVAELRATLESSADGILVTDLDGAIRSFNQRFAELW---------RLPA 167 Query: 158 KLFMSRREAAASRRNNRVFFRSGNA---YEVELWIPTCKGQRLFLFRNKFVHSG------ 208 L R +A R + + P + L R V Sbjct: 168 ALLTERNDAGIHDWMVREVLDAEGYAARLQAIAQNPLLEASDLLTLRQGRVLERVTLPQY 227 Query: 209 SGKNEIFLICSGTDITEERRAQERLRILA 237 + I + + DIT+ ++ L++ A Sbjct: 228 ARGRPIGRVYAFRDITQRLHDEQGLKLAA 256 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 786 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 191/630 (30%), Positives = 331/630 (52%), Gaps = 27/630 (4%) Query: 30 LRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREW 89 L S + + RT+ L A+ + + + + SS++ + + R + +R Sbjct: 785 LALSISSFKDQVRTMDLDAQTFSGVPVILEMQSSILR--NESGAIEGILATCRDVTQR-- 840 Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH 149 R + H A +V + AI++ S G I R NR TG Sbjct: 841 --------------RFIEHEARTASEVFENSSEAIMMTTSTGLISRVNRAFTHLTGFDGQ 886 Query: 150 DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS 209 VIG + + ++ + + ++ R ++ EL KG++ + Sbjct: 887 HVIGVNPKQFI-AKDVSHQTMQDIRDALLVDGYWQGELDYINRKGEKHPSWTGVTALKDE 945 Query: 210 GKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGV 269 I +DIT ++ + R++ LA D +TGLPNR M + +D + + +++ + Sbjct: 946 MGQIQSHIIISSDITHRKQTEARIQHLAYFDPLTGLPNRAQMHEALDRLMAK-EESQLAL 1004 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA 329 +++DLD FK +ND GH GDQ+L++V+ + + +++R GGDEF V+ + ++ Sbjct: 1005 LFIDLDRFKPINDTMGHPAGDQVLKEVASRLKEAVGAKNLVSRIGGDEFTVIMATLPETE 1064 Query: 330 -----LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 + ++ RIL ++ PF I ++Y S SVGIAL PE+ T ++R+ADTAMY A Sbjct: 1065 QAIQTIIDVSERILHQMMQPFFIEDRQLYLSASVGIALYPENALSGTDLLRNADTAMYHA 1124 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALV 443 K G+ F + EMN++ E L L+ NL AL+ D+ + +Q + + + +E L+ Sbjct: 1125 KAMGKNNFQFYAEEMNEKAMERLELENNLHLALQRDEFELTFQAQWDIKHNCICGVETLL 1184 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISAR 502 RW P+ GL+ P FI EE+GLIVP+G WV+ Q+ W++ G + ++AVN+SAR Sbjct: 1185 RWHRPDIGLVGPDKFIPIIEETGLIVPIGEWVLRRACEQIMDWQEAGYVIPKLAVNLSAR 1244 Query: 503 QLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDF 562 Q D + + +++ E + I++ELTES L+++ + L+V+ + ++G + +DDF Sbjct: 1245 QFKDAQMLDRICRIVDETGVDPELIELELTESILMDDIDRTLAVLNEARKMGFGLSIDDF 1304 Query: 563 GTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESA 622 GTGYSSLS L +FP+ +K+D+ F++++ + R IVA+A L L VIAEGVE+ Sbjct: 1305 GTGYSSLSYLKQFPVSQLKIDKSFIQNLPYNQEDGQITRTIVAMANNLGLGVIAEGVENE 1364 Query: 623 KEDAFLTKNGINERQGFLFAKPMPAVAFER 652 + FL G + QG++++ P+PA F + Sbjct: 1365 SQRQFLKTIGCYQVQGYMYSHPVPADLFAQ 1394 Score = 46.4 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 17/236 (7%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDES 73 + + + E+ L S + + + RE+ I + V Sbjct: 496 MHGGSNKQKFIEALKDLFLSYNHELMQEMAEGIRQGAKSFSREVAFINAK-----GVKNH 550 Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 L V+ ++ + + + +D L F V+ + + D Sbjct: 551 YL-VNATLDQVGQDQAIVSFIDINDRIKAELALKDSEQFWSNVIQTLPDTVYVNDLFAKQ 609 Query: 134 QRFN-RLCEDYTGLKEHDVIG-QSVFKLFMSRREAAASRRNNRV-FFRSGNAYEVELWIP 190 RF+ R + G ++ + +L + + +++ R G E + Sbjct: 610 TRFSSRHIGELLGYSSEELEEIEHWRQLIHPDDVSKSDAAISQLKTMRPGEVKETTARLK 669 Query: 191 TCKGQ-RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA-------QERLRILAN 238 G R+ FR+ S + + + DITEE A + R R+LAN Sbjct: 670 HKNGNWRVIRFRDCIFSSETQVPAQYYVGMARDITEEEDAKIQLSFSERRYRLLAN 725 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 786 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 203/581 (34%), Positives = 302/581 (51%), Gaps = 10/581 (1%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR---GNIQRFNRL 139 + G ++ D R L + + + +AI+I I+ N Sbjct: 467 TDGDGQVIGVLGSYTDITEQKR-ADLALRLQSRALDASVNAILITAPSPSGNLIEYVNPA 525 Query: 140 CEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFL 199 TG +VIG L R+ R + + G + Sbjct: 526 FMRITGYDLDEVIGHDCRVLQRDDRDQEGV-ALIREALAANREVSAVVRNYRKDGALFWN 584 Query: 200 FRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI 259 + I D+TE R QE+L AN D +T LPNRN ++D ++HA+ Sbjct: 585 QLFIAPVPNAEGVITHHIGVINDVTELIRYQEQLEYQANYDGLTRLPNRNLLRDRLEHAL 644 Query: 260 NHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDE 317 A + V VV+LDLD FK VND+ GH GD+LL V+ + C +AR GGDE Sbjct: 645 VVAQRHHTGVAVVFLDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDTVARHGGDE 704 Query: 318 FLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRH 376 F+++ ++T + +L R+ + P + E+Y CS+G +L P+ G D+ +++ Sbjct: 705 FVIVMTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDAETLMKK 764 Query: 377 ADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGE 435 AD AMY AK+ GR F + PEMN L L+ LR+AL +++ ++HYQP++ G+ Sbjct: 765 ADVAMYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQVDIVSGQ 824 Query: 436 VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-R 494 + +EALVRW PE GL+PP FI AEESGLI PL WV+ + RQ W+D+G+ R Sbjct: 825 IVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQGLPPAR 884 Query: 495 VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLG 554 V+VN+SAR + I + QVL E E +++ELTES ++ N E A+ ++ + LG Sbjct: 885 VSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLNELHALG 944 Query: 555 AQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQV 614 + +DDFGTGYSSLS L RFP+D +K+D+ FV DI +++ AI+A+A +L LQV Sbjct: 945 IGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKLQV 1004 Query: 615 IAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 IAEGVE++ + FL + +E QGF FAKP+ Sbjct: 1005 IAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELLH 1045 Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 49/148 (33%), Gaps = 8/148 (5%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK-EHDV 151 A D + E V+ I D N GL V Sbjct: 353 ADDVTDQINAEAEALRSNQMLEAVIDNIPQRIFWKDLNSRYLGCNMAFARDAGLAYPEQV 412 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNA---YEVELWIPTCKGQRLFLFRNKFVHSG 208 +G+S L R A ++R +G +EV+ I G +K + Sbjct: 413 VGKSDTDL-PWRAFADLLNEHDREVASTGVPKMNFEVDFVI---DGVHRTRVTSKLPFTD 468 Query: 209 SGKNEIFLICSGTDITEERRAQERLRIL 236 I ++ S TDITE++RA LR+ Sbjct: 469 GDGQVIGVLGSYTDITEQKRADLALRLQ 496 Score = 55.3 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 43/132 (32%), Gaps = 4/132 (3%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRG-NIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 AR L+ + + + I D N + G E + +G ++ + Sbjct: 236 ARALARNDERFRSLFDDHTVPMYIFDRDTLRFLAVNTAAIEQYGYTESEFLGMTIRAIRP 295 Query: 162 SRREAAASRRNNRVF-FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 + A R R R + G + + + + G++ F++ Sbjct: 296 TSEVARLERHLARSADLRQSHTMAGIWRHRRKDGSIISVNVSYHALNFMGRDASFVLAD- 354 Query: 221 TDITEERRAQER 232 D+T++ A+ Sbjct: 355 -DVTDQINAEAE 365 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 193/578 (33%), Positives = 299/578 (51%), Gaps = 11/578 (1%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 ++ D + L A AI+I + G I R N TG ++ DV+ Sbjct: 639 VASLVDDITRREAVEAELRLAATTFE-TDEAILIAGADGRILRVNAAFSRITGYRQEDVV 697 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G++ +LF S A R ++ E+W G+ + + + Sbjct: 698 GRNP-RLFKSGLHGAEFYREVWRSLEQTGRWQGEIWNRRKNGEVYPERKTITAVRSANGD 756 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKV--GVV 270 + +DI+E +R +E++R LA DS+TGLPNR+ + + + + A ++ Sbjct: 757 ITHYVAISSDISELKRTEEKIRQLAYYDSLTGLPNRSLIFERLTQQMKAARREGTYGALL 816 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL 330 ++DLD FK +ND+ GH GD+LL V+ + +CLE ++ AR GGDEF+VL + SA Sbjct: 817 FMDLDYFKTLNDSLGHHMGDRLLVQVAERLKNCLEDEEAAARLGGDEFVVLLAPAKPSAS 876 Query: 331 EAM------ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 A A R+ L PF++ Y S S+GIAL P+ + + +++ ADTAMY A Sbjct: 877 VAAGQAIVHARRVRELLSAPFQLDDYVHYISVSIGIALFPDGANTAEDVLKQADTAMYVA 936 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVR 444 K GR + M V L L+ LRKAL ND+ ++YQP++ G V EAL+R Sbjct: 937 KNEGRDGVRFYESAMEAVVRGRLELEKALRKALANDEFEVYYQPQMLGDGRVVGAEALIR 996 Query: 445 WQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQ 503 W PERG I P FI E++G+I+ +G V+ +A+ R +G+ L +++VN+S RQ Sbjct: 997 WFHPERGAISPDQFIPVCEQNGMILRVGAIVLRRACACLAEIRARGLALPKLSVNVSPRQ 1056 Query: 504 LADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFG 563 + T L+Q E + +ELTE L+ + ELA++ I + LG +DDFG Sbjct: 1057 FMRSDLMTQLEQFCLENGVSPTDLCLELTEGVLLNHTELAVAQIGRLKNLGVSFSIDDFG 1116 Query: 564 TGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAK 623 TGYSSL+ L P+D +K+ FVRD+ + ++V IV++A+ L L VIAEGVE+ Sbjct: 1117 TGYSSLAYLKHLPLDDLKIASAFVRDLEQDSSDAAIVETIVSMARHLGLDVIAEGVETRT 1176 Query: 624 EDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 + L + G + QG FA+P+P F R+ +RA Sbjct: 1177 QVEILERYGCHRFQGNYFARPLPKDDFIRFVAERQRRA 1214 Score = 69.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 42/147 (28%), Gaps = 5/147 (3%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 + + + R L V A++ D + R+N E G + Sbjct: 520 DVTERWEAERALRQSEERLRLH---VEHLPLAVIEWDLDFIVSRWNPAAERIFGYGADRM 576 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 IG+S LF + G+ V T G+ + + Sbjct: 577 IGRSAGILFPE--DVLEQAEAIWREVSGGSGNRVVTANVTADGRTIRCEWYNTPLTTPDG 634 Query: 212 NEIFLICSGTDITEERRAQERLRILAN 238 I + DIT + LR+ A Sbjct: 635 TVIGVASLVDDITRREAVEAELRLAAT 661 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 202/602 (33%), Positives = 315/602 (52%), Gaps = 8/602 (1%) Query: 60 ITSSLMMSLTVDESDLSVHLVGRKINKREWAGNAS--AWHDTPAVARDLSHGLSFAEQVV 117 +T ++ + L + + D S+ V I W + + A + L ++ Sbjct: 307 LTLNVTVQLDLVQPDGSLRYVEVSIVPIPWQQSKAYLALLTDITSLQQTQQRLKLLQEAT 366 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 + ++I+I + G I+ N E TG +VIG++ + S + + ++ Sbjct: 367 ENSPASILITSAEGIIEYVNPAFELMTGYGADEVIGKNP-RFLKSGLMSPSFYQDLWETI 425 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 +G + EL+ G+ + + I + DITE++R +E L A Sbjct: 426 TAGETWRGELYNRRKTGELFWDRTSISPVKDLAGQIIHFVAVKEDITEQKRNRELLDHQA 485 Query: 238 NTDSITGLPNRNAMQDLIDHA--INHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRD 295 N DS+T LPNR+ D + A ++ N+ V V+ LDLD FK +ND GH +GD LL++ Sbjct: 486 NYDSLTDLPNRSLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTLGHSYGDCLLQE 545 Query: 296 VSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYT 354 ++ + L + ++R GGDEFL++ ++ LE ++ ++L + P I E+ Sbjct: 546 IAKRLRYHLPREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQPITIEAEELVI 605 Query: 355 SCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLR 414 + S+G+A P G ++R+ADTAMY+AK G F +F P MN + L+T+LR Sbjct: 606 TASIGVACYPNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAHARIQLETHLR 665 Query: 415 KALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGR 473 ALE QL + YQP I+ + V LEAL RW PE G IPP FI AEE+GLI+PLG Sbjct: 666 HALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAEETGLIIPLGY 725 Query: 474 WVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELT 532 VI + VA W+ K VAVN+S RQL ++LQ NF + +E+T Sbjct: 726 RVIEQACQDVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHNFRPNYLKLEVT 785 Query: 533 ESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHK 592 E L++N ++ + G + LDDFGTGYS+LS L R+P ++K+DQ F+RDI Sbjct: 786 EQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKVDQSFLRDIPH 845 Query: 593 QPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 S +LV+ IVA+A L +Q +AEGVE+A++ FL G QG+ F++P+PAV + Sbjct: 846 STESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFSRPLPAVEIDS 905 Query: 653 WY 654 + Sbjct: 906 FL 907 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 785 bits (2029), Expect = 0.0, Method: Composition-based stats. Identities = 187/567 (32%), Positives = 307/567 (54%), Gaps = 10/567 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 R+L + +S A++ D G + N + GL E +++G+ + Sbjct: 284 KISKAYRELRKQHEWLRITLSSIGEAVITTDENGTVTFSNYEIQKMLGLSEEEILGKKLD 343 Query: 158 KLFMS--RREAAASRRNNRVFFRSGNAYEVE--LWIPTCKGQRLFLFRNKFVHSGSGKNE 213 KL + + G+ ++E L + T G+RL + + S Sbjct: 344 KLLSGLVDKREKVYKIPIEEVVNRGSMIKLETDLSLVTPGGRRLVEGTVAPIRNDSD-VI 402 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVY 271 I + + DITE ++ E L + D +TGLPNR+ D + A+ + N ++ Sbjct: 403 IGTVVALKDITEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNEMCALII 462 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SAL 330 LDLDNFK +ND GH GD LL+ V+ I L +AR GGDEF+++ + Sbjct: 463 LDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQIKDINDA 522 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 A RIL + + P+ + E Y + S+GI + P G D I ++ADTA+Y AKE GR Sbjct: 523 TRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGRN 582 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPE 449 + ++T MNQ+V + L ++ +LR+A+E ++ V+ YQP+I G++ EAL+RW P+ Sbjct: 583 NYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHPD 642 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQT 508 GL+PP++FI AE+SGLIV +G WV+ RQ KW + G+ ++VN+SARQ Sbjct: 643 YGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQFQRSN 702 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 I + ++ +++E+TES +++ + V+ Q + G +V LDDFGTGYSS Sbjct: 703 IVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYSS 762 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 L+ L + PID +K+D+ FV+DI +++ + ++++A L+L V+AEGVE+ ++ FL Sbjct: 763 LNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLFL 822 Query: 629 TKNGINERQGFLFAKPMPAVAFERWYK 655 K ++ QG+LF+KP+PA E+ + Sbjct: 823 KKEKCDKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 784 bits (2027), Expect = 0.0, Method: Composition-based stats. Identities = 190/566 (33%), Positives = 312/566 (55%), Gaps = 7/566 (1%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 H + + L A V + + A+ + D +G I N D TG E +V Q Sbjct: 440 GIHTDITDRKRVEESLKLAASVYNNSREAMSVQDDKGLIININAAFTDITGYTESEVKNQ 499 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 ++ L SR +A + + G ++ E+W+ G+ ++ + Sbjct: 500 NIKILQCSRNNRSAYEQMHMAVEEEGR-WQGEVWLRRKNGEEFVVWLTLNALFDAEAQTQ 558 Query: 215 FLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYL 272 + +DITE+++A++ + AN D++TGLPNR + D ++ I +D+ +++L Sbjct: 559 RHVALFSDITEKKQAEKIIWKQANYDTLTGLPNRRMLLDYLNAEILKSDSREQHFALMFL 618 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALE 331 DLD FK+VND GH GD LL + + + +C+ V+AR GGDEF ++ S + ++ Sbjct: 619 DLDYFKEVNDTLGHDMGDMLLSEAAKRLKACIRDSDVVARLGGDEFTIVLSGVTDIKGVD 678 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A ILTR+ P+ +G Y S S+GI L P+ S +++HAD AMY AK+ GR + Sbjct: 679 KVAKHILTRIAEPYNLGEETAYISASIGITLYPDDASTIEGLLKHADQAMYAAKDEGRNR 738 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEV-RSLEALVRWQSPER 450 F FTP M + + L +LR A+ + + ++YQP ++ +G + EAL+RW+ P+R Sbjct: 739 FHYFTPSMQRYAKYRMRLIQDLRSAIADHEFELYYQPIVSLQGGLGLKAEALIRWRHPKR 798 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQT- 508 GL+ P++FI+ AEE+GLI+ +G WV RQ A WRD+ GI +++++N S Q D+ Sbjct: 799 GLVSPIEFIAVAEETGLIIEIGNWVFQQAARQSALWRDRFGIEVQISINKSPVQFRDEGE 858 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + +L+ LN I +E+TE L++ + S + Q+ G Q+ LDDFGTGYSS Sbjct: 859 SINSWVNLLKTLNLTNNNICIEITEGLLLDGNSAISSKLTQYRDSGIQISLDDFGTGYSS 918 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 L+ L +F ID +K+DQ F R++ +L AI+ +A L ++VIAEGVE+ + L Sbjct: 919 LAYLKKFDIDFLKIDQSFTRNLDSNSDDFTLCEAIIVMAHKLGMKVIAEGVETDYQRKIL 978 Query: 629 TKNGINERQGFLFAKPMPAVAFERWY 654 G + QG+LF++P+P FE+ + Sbjct: 979 ANAGCDFGQGYLFSRPVPVEKFEQAF 1004 Score = 52.6 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 41/138 (29%), Gaps = 4/138 (2%) Query: 98 DTPAVARDLSHGLS---FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 + RD L + + I I D + N E +++ Sbjct: 188 RRIEIERDQKIKLQDHLLFKSHFHSGNMGIAITDIAHEWIKVNPSLCQMLKYTEQELLSL 247 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 S L + R+ N +E++L + ++ + E+ Sbjct: 248 SWLDLMSADDFQLYKHHLLRMLDGRINEFELDLCLIAKDETIVYTHMTVACQRVQSRVEL 307 Query: 215 FLICSGTDITEERRAQER 232 +I + T ++ A++ Sbjct: 308 -IITGFLNRTSQKEAEKE 324 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 784 bits (2027), Expect = 0.0, Method: Composition-based stats. Identities = 213/632 (33%), Positives = 333/632 (52%), Gaps = 17/632 (2%) Query: 35 TETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESD---LSVHLVGRKINKREWAG 91 TE + +L +A ++ T + +MS+ S LVG + + G Sbjct: 185 TELVPLEVAYKLREMEARVLKAGTALQELEVMSMPSGASYWLSTKFPLVGENSDSQHVGG 244 Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR---GNIQRFNRLCEDYTGLKE 148 A + V +D L + + + IVI+D+ + N E TG Sbjct: 245 IAIDITERMKVEQD----LLLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSS 300 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF-LFRNKFVHS 207 + IG++ K R R V L G V Sbjct: 301 EEAIGRN-CKFLQGMDTDQPELGKLRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVSD 359 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK- 266 SG + D+T+ +R QE L AN D++TGL NRN + + A+ A + Sbjct: 360 TSGGAVGHFVGVLYDVTQIKRYQEDLEHQANYDTLTGLANRNLLNERTQQALLQARRHDH 419 Query: 267 -VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT 325 + +V++DLDNFK VND+ GH GD+L+ +V + +C+ +AR GGDEF++L +N Sbjct: 420 FLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFVLLLTNQ 479 Query: 326 SQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 S S A + RI L P I E+ +CS+G+A PE G DS +++ +ADTAMY A Sbjct: 480 SVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYRA 539 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALV 443 K GR F +T EMN E L L+++L AL+ND+L + YQP+I R G V +EAL+ Sbjct: 540 KSSGRNNFQFYTKEMNATSGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALI 599 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISAR 502 RWQ P+RGLI P+DFI AE +GLI+P+G WV+ R + + +G+ +RVA+N+SAR Sbjct: 600 RWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSAR 659 Query: 503 QLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDF 562 QL+D+ +++ V++ + + +++E+TES ++ N E + + +++G Q+ LDDF Sbjct: 660 QLSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDF 719 Query: 563 GTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESA 622 GTG+SSL+ L RFPID +K+DQ F+ + P + + I+A+A L ++VIAEGVE + Sbjct: 720 GTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKS 779 Query: 623 KEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 + +FL KNG +E QG+ ++P+ + Sbjct: 780 EHLSFLKKNGCDEGQGYFISRPLTFDDLRMFL 811 Score = 48.7 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 55/192 (28%), Gaps = 21/192 (10%) Query: 50 QAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHG 109 + RI E I S L + SD + ++ A + R + Sbjct: 81 VSGRIGEELAIES-----LKLGASDYVIKTNLSRLPSA--VTRAMEHVEQRDARRRIETE 133 Query: 110 LSFAEQVV----SEAHSAIVILDSRGNIQRFNR----LCEDYTGLKEHDVIGQSVFKLFM 161 L + + A I D G N G IG+ +L Sbjct: 134 LLESNLMFRTFMENLPGAAFIKDQDGRYLYCNHGLDKAFNVEKGCS----IGKLDTELVP 189 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 A R ++G A + + G +L KF G + + Sbjct: 190 LE-VAYKLREMEARVLKAGTALQELEVMSMPSGASYWL-STKFPLVGENSDSQHVGGIAI 247 Query: 222 DITEERRAQERL 233 DITE + ++ L Sbjct: 248 DITERMKVEQDL 259 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 784 bits (2027), Expect = 0.0, Method: Composition-based stats. Identities = 180/563 (31%), Positives = 304/563 (53%), Gaps = 13/563 (2%) Query: 108 HGLSFAE--QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 LS A + ++ AI++ D I N +G +++G+ L S Sbjct: 17 EVLSRAALLRAYEQSQDAILVTDRDNLIVAANGAFCQLSGYASDELLGKDPRVL-ASDNS 75 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 A + + + +E E+W G+R + V + + + +++ Sbjct: 76 TAEHYASIWNALATKDFWEGEIWDKNKNGERYNRWLKIAVLRDAEGQIENHVANFSEMEA 135 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDA 283 + +RL LA D +T LPNR A + + A+ DN ++ ++ +DLDNFK +ND Sbjct: 136 SKEYADRLAYLAYHDPLTNLPNRLAFESQLAQALRGCERDNRQLALMLIDLDNFKNINDT 195 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLR 342 GH GD+LL+ V+L + + ++AR GGDEF+++ +A+++ + Sbjct: 196 LGHHVGDELLQKVALRLRESVRSSDLVARIGGDEFVIVLPEIESPLTAARVANKVQQNMA 255 Query: 343 LPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQR 402 +RI +Y + S+GI+L P GSD+ ++R+ADTAMY AK+ GR +T MN+ Sbjct: 256 DSYRIADHALYATPSIGISLFPIDGSDANTLLRNADTAMYHAKDAGRNNHQFYTARMNEA 315 Query: 403 VFEYLWLDTNLRKALE-----NDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPL 456 E L ++ LR+A+ + + +H+QP++ T G+V LEAL+RW +P G + P+ Sbjct: 316 AGERLHMENELRQAISAISPGDSEFSLHFQPQVQTATGQVFGLEALLRWNNPIFGQVSPM 375 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQ 515 FI+ AEE+GLI PLG WVI + R + + + GI ++R+A+NISA+QL + + ++ Sbjct: 376 RFIAIAEETGLIQPLGDWVIWETCRLIRQMKQHGIEDIRIAINISAQQLRHENLLLLVRG 435 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 L + I++E+TES ++N E LS++ Q + +G + +DDFGTGYSSL+ L Sbjct: 436 ALSCYDLRPEDIELEITESTAMQNPETTLSILDQLAAMGIVLAIDDFGTGYSSLAYLKHL 495 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 PI +KLD+ FV+DI ++ A +A+ +L L+++AEGVE+ + AFL G + Sbjct: 496 PIQRLKLDRSFVKDIEIDANDAAICTATIALGHSLGLELVAEGVETEAQRAFLASLGCDT 555 Query: 636 RQGFLFAKPMPAVAFERWYKRYL 658 QG+L++KPMP + K + Sbjct: 556 LQGYLYSKPMPFEETIAYLKAHQ 578 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 199/563 (35%), Positives = 307/563 (54%), Gaps = 10/563 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILD---SRGNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 R L + + + I+I+D + NR E TG + +G++ Sbjct: 251 EQRKAEEALLLRNHAIEASATPILIVDVTQPAMPLIYVNRAFELVTGYSSQEAVGRNCRF 310 Query: 159 LFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF-LFRNKFVHSGSGKNEIFLI 217 L RE + Y + L G + V G + + Sbjct: 311 LQGHDREQPELEKIRTAIRERCPGYAI-LRNYRKDGSLFWNELYVAPVPDPHGGEPRYFV 369 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLD 275 DITE R+ QE L AN D++TGL NRN +++ + AI+ A + V ++D+D Sbjct: 370 GVQKDITEIRQYQEALERQANYDTLTGLANRNLLKERMQQAISEARRHNWTFSVAFIDID 429 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMA 334 NFK+VND+ GH GD+L+R + + SCL +AR GGDEF++L ++ S ++ + Sbjct: 430 NFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARLGGDEFVLLLTSQSLDESIHTVV 489 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 RI + PF I ++ +CS+G+A P G ++ ++ +AD+AMY AK G F Sbjct: 490 QRIRNTIINPFIITGRQLTVTCSIGLANFPHDGRNADTLLSNADSAMYQAKASGSNNFRF 549 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLI 453 + EMN + L L+ +L ALEN QLV+HYQP++ R ++ +EAL+RWQ P+ G+I Sbjct: 550 YAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCMRNSQIIGMEALIRWQHPKLGMI 609 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTA 512 PPL FI +E+ GLIVP+G WV+ Q + + G +RVAVN+S RQL + + Sbjct: 610 PPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGYPPIRVAVNLSVRQLEQKDLVHC 669 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 +++ LQ + +++E+TES L+ N E ++ + + S LG Q+ LDDFGTGYSSLS L Sbjct: 670 IEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRISDLGVQLSLDDFGTGYSSLSYL 729 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 R PI+ +K+D+ F+ DI + R+I+A+A +L +QVIAEGVESA + AFL +NG Sbjct: 730 KRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSLEIQVIAEGVESADQYAFLLENG 789 Query: 633 INERQGFLFAKPMPAVAFERWYK 655 +E QG+L ++P P E + Sbjct: 790 CDEVQGYLLSRPRPFEEMEALLR 812 Score = 56.4 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 2/131 (1%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 R+L + + + I D +G N D L +IG+ LF Sbjct: 131 ERELENSNRLFRVFMQNLPAIAFIKDQQGQYIFANASTVDALQLPHEQIIGKHDTLLFPP 190 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 + A R + G A + P +L+L V G N + G D Sbjct: 191 -QLAQEMRAAEQQTLAQGEAIQHVRQFPLADDVKLWLLTTFPVQDMDG-NFNHIGGIGID 248 Query: 223 ITEERRAQERL 233 ITE+R+A+E L Sbjct: 249 ITEQRKAEEAL 259 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 189/584 (32%), Positives = 299/584 (51%), Gaps = 8/584 (1%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + + S H + + A V + A+ + DS GNI N + T Sbjct: 432 GEDQQPLRMSGTHTDITKRKLAEESMQLASMVYQNSREAMTVTDSNGNIITTNPAFTEMT 491 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G ++ G+S +S+++ + + S + E+ G+ Sbjct: 492 GYSADEITGKS-HTFIVSKQQDKRVYQRMELALNSTGHWRGEVSCRHKNGENYMALLGIN 550 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN 264 ++ + +DITE +++++ + AN D++TGL NR D + H N A Sbjct: 551 SIYNEDRSVHRRVAQFSDITERKKSEKIIWKQANFDNLTGLSNRQMFHDQLLHEKNKAQR 610 Query: 265 N--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 VG+++LDLD FK VND GH GDQLL DV+ + +C+ +++R GGDEF V+ Sbjct: 611 RGLNVGLLFLDLDRFKAVNDTLGHNMGDQLLIDVAQRLRNCVRKRDLVSRFGGDEFTVII 670 Query: 323 SNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 + +E +A +IL L PF +G VY + S+GI P+ G + ++++AD AM Sbjct: 671 GGLKNTQSVERVAQKILCELAEPFLLGEQNVYITPSIGITFYPKDGEATEMLLKNADQAM 730 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLE 440 Y+AKE GR + FT M ++V L +LR AL+ +QL ++YQP + G++R E Sbjct: 731 YSAKEKGRNCYHYFTNSMQEQVERGGQLANDLRYALKKNQLELYYQPIVALGTGQIRKAE 790 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNI 499 AL+RW PE G++ P +FI AEE+G IV +G WV QVA WR + + +V++N Sbjct: 791 ALIRWHHPELGMVSPAEFIPIAEETGTIVEIGDWVFRQAADQVAHWRREYQNDFQVSINK 850 Query: 500 SARQLADQTI-FTALKQVLQELNFEYCPIDVELTESCLIENDEL-ALSVIQQFSQLGAQV 557 S Q + T+ + L L + +E+TE L++ + + F G +V Sbjct: 851 SPVQFREGGSDITSWLEHLLALGLPGQAVVIEITEGLLLDGSSRIVIDKLLAFRDSGIEV 910 Query: 558 HLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAE 617 LDDFGTGYSS+S L +F ID +K+DQ FVR++ L AI+ +A L +QVIAE Sbjct: 911 SLDDFGTGYSSMSYLRKFHIDNLKIDQSFVRNLKVDSDDMILCEAIIIMAHKLGMQVIAE 970 Query: 618 GVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 G+E+ ++ L+ G + QG+LFAKP+P F R++ A Sbjct: 971 GIENEEQRRLLSAAGCDYGQGYLFAKPLPEKDFSCLLLRHIHVA 1014 Score = 71.5 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 44/129 (34%), Gaps = 1/129 (0%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 L I I R N + G +E +++ + +L Sbjct: 201 LKESEFLFRSQFDLGSIGIAITYPGKGWLRVNPRLCEILGYREEELLLLNWSELTHPDDR 260 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 + +++ + Y ++ G+ +++ + G + F+I D +E Sbjct: 261 HLDLYQYDQMLTGEEDGYSLDKRFIRKDGESVYVHMTISCYRVDGAVQ-FVIAGILDSSE 319 Query: 226 ERRAQERLR 234 + A++++R Sbjct: 320 RKHAEDKIR 328 Score = 48.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 43/106 (40%), Gaps = 8/106 (7%) Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRS----GNAYEVELWIPTC 192 N + G + D+ Q+ + + R + +++E + T Sbjct: 358 NARWAEMLGYRFEDI--QNDTSINLDSVHPNDCGRVWQSVTDHLEGRTAQHKIEYRMRTR 415 Query: 193 KGQ-RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 +G+ + L K V+ G + + + + TDIT+ + A+E + LA Sbjct: 416 QGEYKWILDCAKIVNYGEDQQPLRMSGTHTDITKRKLAEESM-QLA 460 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 209/642 (32%), Positives = 332/642 (51%), Gaps = 26/642 (4%) Query: 29 VLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKRE 88 +L S + T PD L A+ +R+M + + + + T+++ + G + Sbjct: 667 LLTLSFQDITHPD---DLRAD----LRQMEALLAGQIDTYTIEKRY--IRKTGESLWINL 717 Query: 89 WAGNASAWHDTPA----------VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNR 138 H+ PA ++ L A V S + I + D +G+I N Sbjct: 718 TVSLVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNP 777 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF 198 T + +V+G++ L R+ + + ++ E+W G+ Sbjct: 778 AFSQITLYEAAEVLGRNARILQSGRQNREFYVALWQDVL-TIGSWRGEIWNRRRDGEVFP 836 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 + + I +D++ + ++ + LA+ D +TGLPNR ++ +DHA Sbjct: 837 EWLSISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHA 896 Query: 259 INHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGD 316 I A + V++LDLD FK +ND+ GH GD LLR + + +CL LAR GGD Sbjct: 897 IERARRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGD 956 Query: 317 EFLVLASNTSQ-SALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAII 374 EF+ + + A+ +A +L RLR P R+ EV SVGI+L PE G + ++ Sbjct: 957 EFVAVIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLL 1016 Query: 375 RHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-R 433 +HADTA+ K G G + +T + +R+ L L+ LR ALE ++HYQP I Sbjct: 1017 QHADTALGQVKGAGGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGT 1076 Query: 434 GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL 493 GEV +EALVRW + LIPP FI AE++GLIVPLG WV+ + R + +WR +G+ L Sbjct: 1077 GEVEGVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPL 1136 Query: 494 RV-AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQ 552 V AVN+S RQ D I +++VL++ +++E+TES ++E A + + Sbjct: 1137 TVLAVNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKH 1196 Query: 553 LGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNL 612 LG ++ +DDFGTGYSSL+ L RFPID IK+DQ FVRDI + ++ + I+A+ + L L Sbjct: 1197 LGVRLAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKL 1256 Query: 613 QVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 V+AEGVE+ + FL++ + QG+LF++P+ A A E+W Sbjct: 1257 HVLAEGVETTDQLDFLSRKQCDSAQGYLFSRPITAAALEKWL 1298 Score = 75.7 bits (186), Expect = 6e-12, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 44/143 (30%), Gaps = 3/143 (2%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 G + V R+ +A I LD G+ R N D G + Sbjct: 610 GLIADHRRKQMVLRESEARFR---ATFEQAAVGIAHLDPDGHWLRVNHKLCDIVGYPPDE 666 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 ++ S + A R+ + + Y +E G+ L++ + Sbjct: 667 LLTLSFQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVSLVRDIH 726 Query: 211 KNEIFLICSGTDITEERRAQERL 233 + I +I + A+ +L Sbjct: 727 NAPAYFISVVENIQSRKEAELQL 749 Score = 44.1 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 14/126 (11%) Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR--R 171 E + +ILD+ I N T + +++G+ +F++F S R Sbjct: 29 EAIFRALPGPHLILDADLKIAAVNDAYLQATLTRRGEILGRGIFEVFPDNPNDPVSEGVR 88 Query: 172 NNRVFF------RSGNAYEVELWIPTCKG------QRLFLFRNKFVHSGSGKNEIFLICS 219 N R R+ + ++ + G + + G+ ++++ Sbjct: 89 NLRASLLRVLSSRTQDVMSIQKYDVRKPGGGAGDFELRYWSPINTPVLGADGAVVYIVHY 148 Query: 220 GTDITE 225 D+TE Sbjct: 149 AQDLTE 154 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 191/648 (29%), Positives = 316/648 (48%), Gaps = 20/648 (3%) Query: 25 ESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVG-RK 83 ES +L+ ST E + E + R+R+ I +L + V+ L + Sbjct: 341 ESERLLQRSTAELLGQEIWQDFGEEVSGRLRQH--IQRALATNRQVEFEYFDAPLGKWLE 398 Query: 84 INKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGN------IQRFN 137 + +A + + + R+ L E ++ + +VI+++ + I N Sbjct: 399 VRAYPFAEGLAVYFRDVSERRNSQEQLMLLETGIARLNDIVVIVEASPHHGSGPQIVFVN 458 Query: 138 RLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRL 197 E +TG +V+ + L R + EL I G Sbjct: 459 DAFERHTGYTRDEVLSRMPGMLQGPGTRQDELARIF-SALQQWKQARGELVIYRKDGGSF 517 Query: 198 FLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDH 257 ++ + + + G DIT+ + A E++ LA D +T LPNR + D ++ Sbjct: 518 WVDLEIVSVAAQNGDLTHWVAVGRDITQRKAADEKIHHLAFYDPLTELPNRQLLLDRLEQ 577 Query: 258 AINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGG 315 A+ + ++++DLDNFK +ND GH GD LL+ V++ + C+ +AR GG Sbjct: 578 ALADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGG 637 Query: 316 DEFLVLASNTSQSALEA------MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSD 369 DEF+V+ + A +A ++L LR P+ + + Y++ S+G+ Sbjct: 638 DEFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGS 697 Query: 370 STAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK 429 + +++ AD AMY AK GR C F P+M V L T+LR L Q ++HYQP+ Sbjct: 698 VSELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQ 757 Query: 430 ITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 + + +EAL+RW+ P+RG++ P +FI AEE+GLI+PLG+WV+ Q+A W+ + Sbjct: 758 VDREQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKR 817 Query: 490 G--INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVI 547 L +AVN+S RQ + ++ + + +ELTES L + E+A++ + Sbjct: 818 PETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKM 877 Query: 548 QQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVA 607 LG + LDDFG GYSSLS L R P+D +K+D+ F+ D+ P ++ AI+++A Sbjct: 878 GTLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLA 937 Query: 608 QALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 Q+L L VIAEGVE+ + +FL G QGFLF P+P FE + + Sbjct: 938 QSLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFEAFMQ 985 Score = 64.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 72/209 (34%), Gaps = 22/209 (10%) Query: 37 TTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLS-------VHLVGR--KINKR 87 T + L +AE R+R + + + L+ V ++G + + Sbjct: 227 QTLEELLLHYAAESRGRLRHVISECARKGTPFDEEAQMLTAQDGRRWVRIIGEVVRDGQG 286 Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQV---VSEAHSAIVILDSRGNIQRFNRLCEDYT 144 A D A + L A ++ ++ A V LD G N+ E Sbjct: 287 AITRIQGALQDINARKQAQEETLRLAMRLTTTLASITEAFVTLDREGRFTYLNQESERLL 346 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 +++GQ +++ F + R++ + + E E + L + Sbjct: 347 QRSTAELLGQEIWQDF-GEEVSGRLRQHIQRALATNRQVEFEYFDA-----PLGKWLEVR 400 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERL 233 + + ++ D++E R +QE+L Sbjct: 401 AYPFAEGLAVY----FRDVSERRNSQEQL 425 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 198/598 (33%), Positives = 305/598 (51%), Gaps = 19/598 (3%) Query: 71 DESDLSVHLVGRKINKREWAGNASAWHDTP---------AVARDLSHGLSFAEQVVSEAH 121 + ++ V+ +++ +G ++ R L Q ++ Sbjct: 236 ENREIEVYDQEKQVRTMLLSGEPMEFNRVDCLLFVMRDITERRKAEKQLKILSQACEQSP 295 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 ++IVI D +GNI N E+ +G K +V+G++ L + + SG Sbjct: 296 ASIVITDVQGNITYVNPKFEEISGYKSAEVLGRNPRILKSGNKTQEDYELMWKT-LASGR 354 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 + E G+ + + S + DIT+E++ E L A+ D Sbjct: 355 NWHGEFHNRRKNGELYWERASISPISNQQGIVTHYVAVKEDITKEKQQAEALFHQAHYDH 414 Query: 242 ITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +TGLPNR +D + AI A K G+++LDLDNFKKVND GH GDQLL +VS Sbjct: 415 LTGLPNRILAKDRLQQAIESALRQKHIFGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSER 474 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSV 358 + L +AR GGDEFL++ S S L A+A R+L +R P + +E + S+ Sbjct: 475 LQRALRQTDTVARLGGDEFLIILDQVSHSRKLMAIAQRLLRVMRQPVNLQGLEFFVHGSI 534 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 GI + P+ G + ++R+ADTAMY AK GR F FTP MNQ + + +++ LR+ L Sbjct: 535 GITVFPDDGFHADVLLRNADTAMYAAKLAGRNMFRFFTPHMNQAAQQRMAIESELRQGLS 594 Query: 419 NDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 + I YQP ++ G++ EAL+RW + G +PP FI AEE GLIV LG W++ Sbjct: 595 RQEFQILYQPIVSLESGQIVGAEALMRWHNRLLGTVPPDQFIPIAEEVGLIVELGEWLLD 654 Query: 478 DVVRQVAKWRDK--GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESC 535 +V Q A W V+VN+S RQL D L+ LQ +++E+TE+ Sbjct: 655 NVCCQAAHWHSALGEQTFWVSVNVSPRQLKDSYFVAILQGFLQRYQVRPEWLELEITENL 714 Query: 536 LIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPV 595 ++E + L + + + LDDFGTGYSSL+ L +F +++K+D+ FV + Sbjct: 715 ILEENGDLLKNLSDLEEENIALSLDDFGTGYSSLNYLRKFNFNSLKIDRSFVELLPHDNN 774 Query: 596 SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 + LVRAI+A+A L L+VIAEG+E+ ++ FL G + QG+LF+ PA+A E W Sbjct: 775 TVGLVRAIIAMAHHLELKVIAEGIETPEQWNFLRLQGCDYGQGYLFS---PAIAVEEW 829 Score = 66.8 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 61/182 (33%), Gaps = 34/182 (18%) Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF---AEQVVSEAHSAIVILDSR- 130 L + L + N+ N AR + + +++ I I Sbjct: 120 LQLQLKLHQTNQALLQKNQQLEEQIEKTARTQAALMQSEINFAVAFNQSPDPIFIYGRNS 179 Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS--RRNNRVFFRSGNAYEVELW 188 G I N+ + GL + +++G +SR++ + + F R ++ Sbjct: 180 GCIMDVNQPFCQFFGLTKQELVG-------VSRQQFYFWVDEQQRQSFLRDLLLWQ---- 228 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLIC--------------SGTDITEERRAQERLR 234 G F R V+ + L+ DITE R+A+++L+ Sbjct: 229 ---KDGLVKFENREIEVYDQEKQVRTMLLSGEPMEFNRVDCLLFVMRDITERRKAEKQLK 285 Query: 235 IL 236 IL Sbjct: 286 IL 287 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 783 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 191/573 (33%), Positives = 299/573 (52%), Gaps = 7/573 (1%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 R +A A + L A +V + A+++LD+ N C GL Sbjct: 362 RRFASYRGEIAQRNAALEAKNRELQLAARVFECGNEAMMVLDADHRFITVNSACAQLAGL 421 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 + G+ +L + + A R R G A+ E+ + G L + Sbjct: 422 DAAALRGRPAAQLL-NDHDGAGWERIARELAEQG-AWSGEVTVRREDGPTLPAQLSVSAV 479 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN-- 264 S + + TD++ ++ + LR +A D++T LPNR+ + D AI A Sbjct: 480 LNSAGGATHYVGALTDMSAHKQTEALLRHMAEYDALTDLPNRSLLHDRARAAIQGAARTD 539 Query: 265 NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN 324 ++++DLD FK VND+ GH GD LLR + + S L +ARPGGDEF++L + Sbjct: 540 RLAALLFIDLDRFKNVNDSLGHSVGDALLRQAAKRLASLLHGGDTIARPGGDEFVMLLAE 599 Query: 325 TSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 + A+ A A++I+ PFR+ E+ + S+GIA++P+ G D+ ++R+AD AMY Sbjct: 600 ITDRAVAANRAAQIIDAFSTPFRVEHYELSVTPSIGIAIAPDDGVDADTLLRNADAAMYH 659 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEAL 442 AKE GR + FT EM+ RV E L L+ LR+A+ D+ + YQP+ + EAL Sbjct: 660 AKESGRNTYRFFTDEMSLRVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEAL 719 Query: 443 VRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISA 501 VRW+ PERGLI P FI AE++GLIV +GR V+ WR G+ ++ VAVN S Sbjct: 720 VRWRHPERGLIAPERFIPLAEDTGLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASP 779 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 Q+ + +VL E +++ELTES L+ + + + +G ++ +DD Sbjct: 780 VQIHHGNFAETVAEVLAETGLPARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDD 839 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSL+ L RF +D +K+D+ F+ D+ P ++ AI+ +A++L + VIAEGVE+ Sbjct: 840 FGTGYSSLAYLKRFQLDKLKIDRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVET 899 Query: 622 AKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 A ++ FL G E QG+LF+ P+P + Sbjct: 900 AAQERFLVDQGCAEGQGYLFSPPVPVESMTALL 932 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 186/580 (32%), Positives = 304/580 (52%), Gaps = 9/580 (1%) Query: 81 GRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLC 140 G + + + +A T + + + + I +L G+ + N Sbjct: 99 GEPCGIQGFFRDITARKKTEKALQTSEERFR---TIYESSVAGIAMLAPDGHFLQANSAF 155 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 ++ G E +++ + + R N ++ E G + Sbjct: 156 CNFLGYNEEELLQMKITDVTHPDDIEDTLSRRNIARANRLHSIVCEKRYIRKDGSVFWAQ 215 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 + + N ++ + DIT + A+ER+R LA DS+TGL NR D +D + Sbjct: 216 LSSTWFFDANGNPLYTVPVIQDITRRKEAEERIRELAYYDSLTGLANRTLFNDRLDQVMA 275 Query: 261 HADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 + + +++LDLD FK VND GH GD +LR + + CL + +AR GGDEF Sbjct: 276 RSRRRQSRFALMFLDLDRFKGVNDTLGHAVGDAMLRQAAERLNECLRENDTVARLGGDEF 335 Query: 319 LVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 +++ S+ + A L +A +IL L PF +G+ EVY+S SVGIA+ P+ G ++T ++RHA Sbjct: 336 VIILSDYKEDANLPRVADKILKALSSPFDLGVREVYSSTSVGIAIYPDDGDEATDLLRHA 395 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEV 436 D AMY AKE G F ++ EMN R + ++ NLR+ALE ++ I YQP+I +V Sbjct: 396 DMAMYAAKESGGDTFRFYSSEMNARAVSRMDMEANLRRALEQEEFFIEYQPQIDLITNKV 455 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRV 495 +EAL+RWQ P+ G+IPP FI AEE+ LI+PLG WV+ V Q W+ +G + RV Sbjct: 456 AGVEALLRWQHPQLGVIPPTQFIGLAEETNLILPLGEWVMRRVFEQCVMWKQEGYLPFRV 515 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 +N+S RQ + ++L E ++ E+TES ++++ + A+ ++ +LG Sbjct: 516 GINVSGRQFVQPDFVDMVCRLLDETGAAPELLEFEITESVVMKDVDAAVLTLEALKKLGI 575 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 + +DDFGTGYSSLS L P++ +K+D+ F+ D+ +++V A +A+A+ L L V Sbjct: 576 NMAIDDFGTGYSSLSCLKHLPLNRLKIDKSFISDLQDNADDRAIVEATIAMAKRLELGVT 635 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF-ERWY 654 AEGVE+ + F+ K +E QGF F++P+ + W Sbjct: 636 AEGVETEGQYGFVQKRECDEVQGFYFSRPLSPSEVADAWL 675 Score = 64.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 48/121 (39%), Gaps = 2/121 (1%) Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN 173 ++ ++ I ++ G I NR+ ++ G ++D+ + F L + R Sbjct: 4 ADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLNFFDLLHADFHCDCQDRIQ 63 Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 R+ E+ T G ++ + ++ +G+ + DIT ++ ++ L Sbjct: 64 RLMSGETVP-RFEVEYKTRYGHKIIAEGSISLYKENGE-PCGIQGFFRDITARKKTEKAL 121 Query: 234 R 234 + Sbjct: 122 Q 122 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 175/556 (31%), Positives = 291/556 (52%), Gaps = 11/556 (1%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ-SVFKLFMSRR 164 ++ + + A I +L + N G +++ Q L + + Sbjct: 28 MTEQETMFRSTMEAAQVGIFVL-QNQRFKYVNPFLVGMFGYSAEELLEQMGPLDLILPEQ 86 Query: 165 EAAASRRNN-RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 A + R G+ Y EL G L + G + + DI Sbjct: 87 HAFVIEQMQLRAAGVLGHNY--ELTGLRKDGSTLPIMVLGSPSVIGGLPAS--VGTVLDI 142 Query: 224 TEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVN 281 + ++ A++R+R LA+ D +TGLPNR +++ + + A+ K + V++LDLD+FK+VN Sbjct: 143 SAQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFKRVN 202 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRL 341 D+ GH GD+LL +V+ + S + LAR GGDEF+ +A +A R++ Sbjct: 203 DSLGHSVGDELLCEVARRLDSVVRRIDTLARLGGDEFIFAMPGFHTAAAVEVARRLVEVF 262 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 PF + E+ + S+GI++ P G D ++R+ADTAMY AKE GR F ++ EMN Sbjct: 263 SRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRNAFQFYSSEMNT 322 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFIS 460 + L +++NLR+AL ++ ++HYQP + G + +EAL+RW PE GLI P FI Sbjct: 323 TTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIH 382 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQE 519 AEE+GLI P+G WV+ + RQ W D G+ + +AVN++ Q + L Sbjct: 383 VAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALAT 442 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 + +++ELTE ++ + ++ + + ++G ++ LDDFGTGYSSL+ L RFP+ Sbjct: 443 SGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGK 502 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ FV D+ P ++ IV++ ++L + V+AEGVE ++ A L K G + QG+ Sbjct: 503 LKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGY 562 Query: 640 LFAKPMPAVAFERWYK 655 F++PM A + Sbjct: 563 YFSRPMSADGMADMLR 578 >UniRef50_Q39WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=Q39WZ5_GEOMG Length = 739 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 191/581 (32%), Positives = 307/581 (52%), Gaps = 12/581 (2%) Query: 90 AGNASAWHDTPAVARD---LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 A A A + + R+ + G + A+ I + G + N + G Sbjct: 159 AMAAIASYFMTVIRRETDAVREGEERLATFLDTANDLIHSVTPDGRLLYVNEAWQRTLGY 218 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF-V 205 + F + RV + +E G+ + + + Sbjct: 219 SAEEADAVPFFDILHPDSREQCCAELQRVVSGDALS-PMEAVFTAKDGRSVIVEGSLSCA 277 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN 265 H G + I+ IC DITE + A+E+L LA+ D++TGLPNR D + A A+ Sbjct: 278 HGGDESSVIWSIC--RDITERKHAEEQLYRLAHHDTLTGLPNRILFMDRLQQAKALANRY 335 Query: 266 K--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 + V V++LDLD FK +ND GH GD LL+ V+ I C+ +AR GGDEF ++ Sbjct: 336 RYQVAVLFLDLDRFKIINDTLGHPVGDHLLQQVAHRIAGCVREVDTVARIGGDEFTIILV 395 Query: 324 NTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 N ++ M +IL L PF I E++ + S+GI+L P G + +++ AD AMY Sbjct: 396 NVDTVEDVKRMGQKILKTLAAPFNIDTHELFVTASIGISLFPSDGDNLDQLVKKADIAMY 455 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEA 441 K GR ++P+M+ + L L+T+LRKAL+N + ++YQPK+ + ++EA Sbjct: 456 CVKGEGRNNVQFYSPQMDANADKRLLLETSLRKALDNREFRVYYQPKVDIVSKRITAMEA 515 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNIS 500 L+RW P GL+ P +FI AEE+GLI+P+G WV+ Q +W +GI +RVAVN+S Sbjct: 516 LIRWDHPILGLVSPGEFIPLAEETGLIIPIGEWVLRAACFQNCEWVRQGIPPMRVAVNLS 575 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 Q + + ++ +L E +++E+TES +++N + A+SV+ Q LG + +D Sbjct: 576 GYQFQQKNLLETIRGILDETGLTADLLELEITESVIMQNPDFAVSVLNQLRDLGVHISID 635 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFG GYSSL+ L RF ++ +K+D+ FVRD+ ++ AI+A+ +LNL+VIAEGVE Sbjct: 636 DFGIGYSSLAHLKRFSVNTLKIDKSFVRDVEINSADAAIATAIIAMGNSLNLKVIAEGVE 695 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 + + +FL+ N +E QG+LF+ PMP + + + + A Sbjct: 696 TEGQLSFLSDNKCDEVQGYLFSTPMPPEKVAEFMREHGRSA 736 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 185/562 (32%), Positives = 299/562 (53%), Gaps = 7/562 (1%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 + L A QV ++ I+I D++ I N C + TG + +V+G + +F Sbjct: 340 QAREDELRVAAQVYEQSREGILITDAQHRIVMLNSRCCELTGYTQGEVVGTTPEWMFSES 399 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 + + + EL + GQ + + +C D+ Sbjct: 400 QVSTPGFVELCRHLDEQGGWAGELLLRQRNGQLFLAWLTLRTVR--LGTSTYHVCMFGDL 457 Query: 224 TEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYL---DLDNFKKV 280 ++ + A+ R++ LA D++TGLPNR + D + A+ + + + L D+D+FK + Sbjct: 458 SDRQAAERRIQYLAYFDTLTGLPNRALLTDRANMALRGVEGDAAPALALLLLDIDHFKHI 517 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTR 340 ND GH GDQLL+ V+ + + + ++R GGDEF+VL + + S ++A IL R Sbjct: 518 NDTLGHSTGDQLLQSVAKRLQATVREGDTVSRQGGDEFVVLLPDANASRAASVAQEILRR 577 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 L RIG ++ S S+GIA++P+ G+D + + A+ AMY AK+ GR F PEM Sbjct: 578 LGFVCRIGEHDISVSVSIGIAMAPDDGTDFATLSKCAEIAMYRAKQEGRNTLRFFFPEMQ 637 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFI 459 +R ++ L LR A+E ++ +HYQP++ GE+ +EAL+RW P G + P +FI Sbjct: 638 ERTLRHVQLTGALRGAVERGEMQLHYQPQVDLQTGELSGVEALLRWTHPLFGAVSPGEFI 697 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQ 518 AEESGLI+P+G WV+ RQ+A W G+ + +AVN+S Q + + +L Sbjct: 698 PLAEESGLIIPIGDWVLRTAARQLADWLRDGLPPMVMAVNLSVLQFNLPGLAQQIASILS 757 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 E +VELTES + E A++ I + +G QV LDDFGTGYSSL+ L RF +D Sbjct: 758 EAGVPPALFEVELTESMAMTEPEAAIATIDELHSVGVQVSLDDFGTGYSSLAYLKRFRLD 817 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+D FVRD P +++V AIV +A++L L +AEGVE++ + + G + QG Sbjct: 818 RLKIDGSFVRDADSDPEDRAIVDAIVGMAESLGLATVAEGVETSGQLEVIRALGGDAVQG 877 Query: 639 FLFAKPMPAVAFERWYKRYLKR 660 + ++P+PA W + + +R Sbjct: 878 YWISRPLPAAGLVAWLEGWQQR 899 Score = 71.8 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 46/145 (31%), Gaps = 6/145 (4%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH 149 A + W D R L + V++ D +Q +NR E G Sbjct: 209 ALDNPRWQDELLAGRR-RRQLFLDQSVLAAIE-----WDDGFCVQEWNRAAERMFGFSRE 262 Query: 150 DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS 209 + IGQ F + S A R + R + T G + S Sbjct: 263 EAIGQHAFFILPSEVRATLDREVLQSLMRQEGGWHSVNVNQTRDGALIQCEWFNTTLVDS 322 Query: 210 GKNEIFLICSGTDITEERRAQERLR 234 + + DITE++ ++ LR Sbjct: 323 NGKSLGVTSLVLDITEKQAREDELR 347 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 782 bits (2020), Expect = 0.0, Method: Composition-based stats. Identities = 199/649 (30%), Positives = 308/649 (47%), Gaps = 17/649 (2%) Query: 20 YWRLTESSDVLRFSTTETTEPDRTLQLSAEQA-----ARIREMTVITSSLMMSLTVDESD 74 Y + + + T E + E A AR R+ +L TV D Sbjct: 32 YVTVNPAYGAIYGYTQEEMAGRSFTMVFPESARDSVLARHRQFLDEGGTLGGEWTVMRRD 91 Query: 75 ---LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 L++ + + + + + A V AI+++++ Sbjct: 92 GVILTIWSESVPFAQHGHRADRLVYVLDITERQKAREQMKIAAAVYESTQEAIIVINTSR 151 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 +I N TG DV+GQ +F S R A + E+W Sbjct: 152 SIISINPAFTRLTGYSAADVVGQ-PSYIFRSDRHDADFYTAMWRTVDEDGVWVGEMWDRK 210 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G V + I + +DIT+ ++ + + AN D++T LPNR+ Sbjct: 211 KDGSDYLKEITINVIKDAAGTPINYVGVFSDITQRKKQEALIWRQANYDAVTTLPNRHHF 270 Query: 252 QDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 QD ++ A+ HA + ++ +DLD+FK VND+ GH GD LL VS + C++ Sbjct: 271 QDKLERAVEHAKQSGRPMALMLIDLDHFKSVNDSLGHRAGDALLLAVSNRLTDCVQGADT 330 Query: 310 LARPGGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGS 368 +AR GGDEF ++ ++ Q+ +A +L +L PF I + S S+GIAL P Sbjct: 331 IARLGGDEFAIILTDLHQNGDSGCLARTLLAQLAQPFNIDGESMLVSASIGIALFPNDSD 390 Query: 369 DSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQP 428 + ++AD AMY AK GR F +TP ++Q L L +LR A++ Q ++YQP Sbjct: 391 TLEELFKNADQAMYAAKSAGRNCFNYYTPALHQAARARLRLTNDLRTAIQCGQFEVYYQP 450 Query: 429 KITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR 487 I +V EALVRW+ P RG+I P +FI AE++GLIVPLG WV + Q+A+WR Sbjct: 451 IIELSTNKVVKAEALVRWRHPIRGMISPAEFIPLAEDTGLIVPLGDWVARQAITQLAQWR 510 Query: 488 DK-GINLRVAVNISARQLADQTIFTA-LKQVLQELNFEYCPIDVELTESCLIENDELALS 545 + +VA+N S QL + Q L + E + +E+TE L+ + Sbjct: 511 KIFDPHFQVAINQSPVQLRSKDFTEMTWVQELAQHGLEGNAVIIEITEGLLLNAESRVND 570 Query: 546 VIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVA 605 + F G Q+ +DDFGTGYSSL+ L +F ID +K+D+ FV D+ V L AI+A Sbjct: 571 NLHLFRDTGIQIAIDDFGTGYSSLAYLRKFDIDCLKIDRSFVEDL--DGVGFELCVAIIA 628 Query: 606 VAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 +A +L L+V+AEGVE+ ++ L + G + QGFLF++P+PA Sbjct: 629 MAHSLGLKVVAEGVETQQQCDTLARIGCDYAQGFLFSRPVPAPELTILL 677 Score = 83.4 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 2/126 (1%) Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 S + ++ I +++ G+ N G + ++ G+S +F + Sbjct: 8 SESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRSFTMVFPESARDSV 67 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 R+ R F G E + G L ++ + G L+ DITE ++ Sbjct: 68 LARH-RQFLDEGGTLGGEWTVMRRDGVILTIWSESVPFAQHGHRADRLVYVL-DITERQK 125 Query: 229 AQERLR 234 A+E+++ Sbjct: 126 AREQMK 131 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 781 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 180/570 (31%), Positives = 313/570 (54%), Gaps = 6/570 (1%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 W T R + A V + + I+I + + N TG +++G Sbjct: 288 YVWLRTIQQLRRRDARMRLATSVFASSSEGILIANPNDEVIGINPAVTALTGYSVQELLG 347 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 + + A SRR ++ E I +G + +G Sbjct: 348 R-PVSFLAPEQTVAESRRQASFSISEKGVWQGEALIKHKQGYTFPVALTITTVTGEDGRV 406 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLD 273 I + +DI+E + + R+ LA+TD++TGLPNR ++ ++ + A+ +GV+ LD Sbjct: 407 ECYINTFSDISERKANEARIHDLAHTDTLTGLPNRMSLYSGLEERL--ANVQPIGVMILD 464 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEA 332 LDNFK +ND GH GDQLL +V+ ++ C+ ++AR GGDEF+++ + + Sbjct: 465 LDNFKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDEFVIVLDCPQATQIVGR 524 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 +A +L RL P+ I E+++S S+GI +SP GSD +++++ DTAMY AK G+ F Sbjct: 525 VAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNIDTAMYAAKSSGKNNF 584 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG 451 FT +M +++ E + ++ +LR+A+ ++ +HYQP++ G + +EALVRW PE G Sbjct: 585 KFFTEKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWG 644 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIF 510 ++ P FI AEE L++PLG WV+ + RQ+++W +G+ + ++VNISARQL + +F Sbjct: 645 MVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLF 704 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 T + ++ + +++E+TES ++++ E + +++ G + +DDFGTGYSSLS Sbjct: 705 TLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLS 764 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L P+ +K+D+ FV+DI P ++ A +A+A+ L L ++AEGVE+ + +L Sbjct: 765 YLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRA 824 Query: 631 NGINERQGFLFAKPMPAVAFERWYKRYLKR 660 G + QG+ F+KP+PA + R+ + Sbjct: 825 QGCDSAQGYYFSKPLPANNIMAFVSRHQQE 854 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 185/557 (33%), Positives = 292/557 (52%), Gaps = 18/557 (3%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 ++ +A AI++ D I +N E G + GQS+ +L ++ Sbjct: 941 RRQASLLDKARDAIIVRDLDHRITFWNEGAERLYGWTREEATGQSIAELLY--QDTQEFL 998 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 R R G + E+ G+RL + + G ++ TDI + + + Sbjct: 999 RATRATQEQGE-WAGEIVQFHRDGRRLDVEGRWTLIQGEQGQPDAILAIDTDIGQRKATE 1057 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLF 288 ++ LA DS+TGLPNR + D + HA+ A + ++++DLDNFK +ND GH Sbjct: 1058 REIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFIDLDNFKTLNDTLGHDQ 1117 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS------ALEAMASRILTRLR 342 GD LL+ V+ + +C+ +AR GGDEF+V+ S + + +IL L Sbjct: 1118 GDVLLQQVAARLNTCVRSVDTVARLGGDEFVVMIEGLSTHPGELAMSARTVGEKILAVLA 1177 Query: 343 LPFRIGLIEVYTSCSVGIALSPEHGSD--STAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 P+ + ++ S+G+A G +++ AD AMY AK GR F P M Sbjct: 1178 TPYVLQGYHYRSTPSIGVAPF-GDGRTSTVGELLKQADLAMYQAKTAGRNTLRFFDPGMQ 1236 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFIS 460 V L+ +LR AL +Q ++HYQP+I RG V +EALVRW P+RG++ P +FI Sbjct: 1237 AVVTARAELENDLRTALAREQFMLHYQPQIDRRGSVTGVEALVRWPHPQRGMVSPGEFIP 1296 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRD---KGINLRVAVNISARQLADQTIFTALKQVL 517 AEE+GL++PLGRWV+ Q+A+W+ +G +L +AVN+S+RQ + + + + Sbjct: 1297 LAEETGLVLPLGRWVLHTACAQLARWQHVPGRG-HLSMAVNVSSRQFHHEAFVEDVVRAI 1355 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 + +ELTES +E+ E ++ + G LDDFGTGYSSLS L R P+ Sbjct: 1356 TATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYLKRMPL 1415 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 D +K+DQ FVRD+ P ++V I+A++++L L VIAEGVE+A++ L + G Q Sbjct: 1416 DQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAGCRAYQ 1475 Query: 638 GFLFAKPMPAVAFERWY 654 G+ F++P+P A E + Sbjct: 1476 GYFFSRPLPETALEDFL 1492 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 52/176 (29%), Gaps = 4/176 (2%) Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 +++ L V+ + + + A + A + A LS + Sbjct: 423 GDTVLGMLKVNADPVFTFSQRQVAYVQILAESLGAVLQLRSYAAQLSASELQYRSLFDAH 482 Query: 121 HSAIVILDSRG-NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRS 179 + + + I NR + G +E +++ + +L+ E SR+ Sbjct: 483 PQPMWVYERGSLRILAVNRAMVRHYGYEEAELLRMTTAQLWP---EQERSRQEIEARALP 539 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + CK + + + TD+T+ R + L Sbjct: 540 PGVRRDAVHRRHCKKDGTPIDMEVYAGDTTFNGRAARQVLATDVTQRMRMERELAR 595 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 173/543 (31%), Positives = 292/543 (53%), Gaps = 5/543 (0%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 V ++ I + D+RG+I NR + TG + +V+GQ+ L S R++ + Sbjct: 531 VFAQGREGITVTDARGHIIMVNRAFSEITGYTQAEVLGQNPRIL-KSERQSPEFYLDMWT 589 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + + E+W G + S + S +D++ + A+ R++ Sbjct: 590 ALTTSGHWAGEMWNRKKDGTVYPEWMAISALRDSQGLTTHYVASFSDLSTAKAAESRIQW 649 Query: 236 LANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLL 293 L+ D++TGLPNR +QD A++ + ++ + +D+F VND GH GD+LL Sbjct: 650 LSQFDTLTGLPNRTLLQDRTALALSMVQRAREPLTMLLVAIDHFGAVNDTLGHQLGDELL 709 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVY 353 +++ + + ++R GG EF+++ T +A+ +L +L P +G+ E+ Sbjct: 710 VEMARRLSDSVREQDTVSRMGGKEFVLVLPGTPAMGAAHLATELLWKLSRPCSLGMHELT 769 Query: 354 TSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNL 413 + S+GIA P++G+D + + + AM+ A+ GR + ++ +M ++V + L L Sbjct: 770 LTASIGIASFPDNGADFDTLFKAVEIAMHRAQLKGRDTYQFYSDDMYEQVLAHDRLIKAL 829 Query: 414 RKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLG 472 R+A+ DQL + YQP++ G++ +EAL+RWQ PE G + P FI AEESGLI+ +G Sbjct: 830 RQAIVLDQLQLVYQPQVDLQTGQICGVEALLRWQHPELGAVSPGQFIPLAEESGLIIGIG 889 Query: 473 RWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVEL 531 WV+ + + +W D GI + VA+N S Q D + +K L E + I +E+ Sbjct: 890 EWVLRRACQDIRRWLDHGIKVPHVAINASPLQFRDNNLVLQVKAALTESQIDPALIYIEV 949 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TES L+++ ++++ LG ++ LDDFGTGYSSLS L RFP D +K+DQ FVRDI Sbjct: 950 TESALMDDVPRNEAMLKALKDLGIKLSLDDFGTGYSSLSYLKRFPFDQVKIDQSFVRDIA 1009 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 LV+ IV++A L ++VIAEGVE+ + + + +E QG+ F KP+ A A E Sbjct: 1010 TSQSDSLLVKVIVSMAHGLGMKVIAEGVETEAQCEIMRTSICDEIQGYFFCKPISAQAIE 1069 Query: 652 RWY 654 + Sbjct: 1070 ELF 1072 Score = 75.3 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 50/141 (35%), Gaps = 3/141 (2%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 ++ + A A + ++ + AI D G FN G + Sbjct: 86 VASMREQEAQA-ENHRSQQLLTALIDSSTDAIFAKDLAGRYLLFNHETTRVMGTTPERAL 144 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G LF +A R N++ E + T G+R+FL + +G+ Sbjct: 145 GHDDTALFPPE-QAELIRANDQRVLALNRTTSYEETLETVDGERVFLATKGPLRDSNGQ- 202 Query: 213 EIFLICSGTDITEERRAQERL 233 I L DIT+ +R + RL Sbjct: 203 VIGLFGISRDITDRKRDETRL 223 Score = 63.0 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 23/200 (11%), Positives = 54/200 (27%), Gaps = 16/200 (8%) Query: 34 TTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNA 93 + DR + + +R M + + E+D+ + R Sbjct: 332 PEGHAQLDRLINVPVIDGGLVRMMAGVGNK---PEPYTEADVETVRLIADAVWRIVRQRR 388 Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 + + A I +D +G + E G +V+ Sbjct: 389 A-----ETALHESEQRHRLLA---DNASDVIWTMDLKGRFTYVSPSVEKLRGFTSAEVMQ 440 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNA-----YEVELWIPTCKGQRLFLFRNKFVHSG 208 Q++ + A+ + + EL P G ++ + Sbjct: 441 QTLAQTLCPSSIPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWTEISTNGMRN 500 Query: 209 SGKNEIFLICSGTDITEERR 228 + + ++ +ITE + Sbjct: 501 EQGDFVGIVGVSRNITERKA 520 >UniRef50_C0INC4 GGDEF family protein n=1 Tax=uncultured bacterium BLR9 RepID=C0INC4_9BACT Length = 765 Score = 780 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 192/594 (32%), Positives = 320/594 (53%), Gaps = 11/594 (1%) Query: 78 HLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFN 137 +L+ +IN R D A+ L A ++ A++ D GNI N Sbjct: 171 YLLKGEINARGLRRALRYAIDRKAIEEKLFAEQESARVTLNSIADAVISADLSGNITFLN 230 Query: 138 RLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV-----FFRSGNAYEVELWIPTC 192 + E TG ++++ +G+ + + E R + V RS A + + Sbjct: 231 SVAEKLTGWQQNEALGRPIADILKVVDEITREPRGSTVERPNQLHRSTKAPSNSILVRR- 289 Query: 193 KGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQ 252 G L + ++ + D++ R + ++ LA D +T LPNR + Sbjct: 290 DGSELPIDESRAPILDRQGQIAGTVTVLHDVSVTRAMELKMAHLAQHDFLTDLPNRRVLD 349 Query: 253 DLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVL 310 D + AI+ A ++ V+++D+D FK +ND+ GH GD+ L+ ++ + +C+ + Sbjct: 350 DRLRQAISLARRQGKQLAVLFVDIDRFKHINDSLGHGMGDKALQSMAERLTTCVRASDTV 409 Query: 311 ARPGGDEFLVLA-SNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSD 369 AR GGDEF++L T+ +A +IL+ + LP RIG E+ S S+GI+ P D Sbjct: 410 ARQGGDEFVILLAEVTTADDAAIVAKKILSAVALPHRIGRHELQISASIGISTCPNDADD 469 Query: 370 STAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK 429 + +I+HAD AMY AKE GR + F +MN+RV + L+++LR ALE + ++HYQPK Sbjct: 470 AETLIKHADIAMYQAKEKGRNNYQFFRADMNERVLQRQSLESSLRLALERQEFLLHYQPK 529 Query: 430 ITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD 488 + G + +EAL+RW+ PE GL+PP FI AE+ GL+ P+GRWV+ + RQV +W Sbjct: 530 MNLETGHITGMEALIRWRHPELGLVPPASFIGVAEDCGLMQPIGRWVLQEACRQVKEWMV 589 Query: 489 KGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVI 547 G+ + VAVN+SA + + F + L+E + + +++ELTE+ L++ E ++V+ Sbjct: 590 AGLNPVPVAVNVSAVEFRRKHFFDGVISTLRETDLDPRYLELELTETVLMKEAEPTIAVL 649 Query: 548 QQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVA 607 G ++ +DDFGTGYSSLS L R P+D +K+D+ FV D+ + + ++V AI+ + Sbjct: 650 HALKSAGVKLAIDDFGTGYSSLSYLTRLPVDTLKIDRSFVTDVTTRTDNAAIVSAIIGMG 709 Query: 608 QALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 ++LNL VIAEGVE+ ++ A L + E QG+ F++P+ A L+ + Sbjct: 710 KSLNLNVIAEGVETQEQLALLRSHCCAEGQGYYFSRPVSVPAVAELLNTELRTS 763 >UniRef50_Q3A0D5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0D5_PELCD Length = 1141 Score = 780 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 181/579 (31%), Positives = 298/579 (51%), Gaps = 10/579 (1%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 + R+ A + ++ S + ++ + I + N + Sbjct: 539 EKTARQLAKEKHQRLRVQELIDNIDAAESRYQLLIENSLVGIFVY-QHHRYTYVNPRFAE 597 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR--SGNAYEVELWIPTCKGQRLFLF 200 G +++ + + + NN + N E GQ + Sbjct: 598 IFGYTPEEIVDSAPQPQLVHPDDQLFVDANNLKILGGVNANHLRYEFVGLRKTGQ--PID 655 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 + G + + LI S DITE + A++ + LA D +TGL NR D I+ AI Sbjct: 656 VEILIGRGISEGQPALIGSLLDITERKEAEKTIEHLAFHDPLTGLANRLLFMDRIEQAIA 715 Query: 261 HADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 HA + +++LDLD FK +ND+ GH GD L++V+ + +CL ++R GGDEF Sbjct: 716 HAHRHHESFALMFLDLDRFKTINDSLGHSAGDAALKEVAQRLTTCLRETDTVSRFGGDEF 775 Query: 319 LVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 VL S S + +E +A +IL L P+ I EV+ +CS+GIA P+ G ++ ++++A Sbjct: 776 NVLLSGPSHEEEIELIAHKILKSLAWPYDINDHEVFMTCSIGIASYPKDGREAITLVKNA 835 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEV 436 DTA+Y AK+ GR F ++ MN R E + ++++LR+ E +L +HYQP++ G + Sbjct: 836 DTALYRAKDLGRNNFQFYSSSMNARALERMAMESSLRRMFERQELRVHYQPQVGLQSGRI 895 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRV 495 LE LVRW+ P +I P F+ AEE+GLIVP+G WV+ Q+ W D G +R+ Sbjct: 896 TGLEGLVRWEHPVGNMIAPSVFVPLAEETGLIVPMGEWVLQAGCYQLKTWLDAGFAPMRL 955 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 +N+SA QL + QVL+E + +++E+TE+ ++ N A +++ +G Sbjct: 956 GINVSAHQLQKSDFAELVMQVLKECDLPPHYLNLEITETVIMHNMNEAFETLRRLRAVGI 1015 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 + +DDFGTG+SSLS L P D +K+D+ FV+++ ++ R I+ +A LNL+VI Sbjct: 1016 TISIDDFGTGFSSLSYLKDLPADHLKIDRAFVQNLPFGNNEANIARHIIEMAHGLNLKVI 1075 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 AEGVE+ + FL + G +E QGFL ++P+ A Sbjct: 1076 AEGVENQAQLDFLREAGCDEIQGFLVSRPLAAEDITEIL 1114 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 780 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 183/567 (32%), Positives = 294/567 (51%), Gaps = 9/567 (1%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A A R L + +A AI ++ G N G ++ Sbjct: 194 AMALVQDITEKRKTDEVLRRFRFSIEQASEAIFWINDEGRFLFVNDQACHSLGYSASELE 253 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 ++ + A +S E G+ + + + N Sbjct: 254 SLHLWDI--DPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVEVSASQCLFN--N 309 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVV 270 E + DIT ++ ++ L +N D++TGL NR + D I AI HA+ + V Sbjct: 310 EENHVAFVRDITIRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVF 369 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL 330 LDLD FK +ND+ GH GD +L V+ + +C+ L+R GGDEF ++ ++ + A Sbjct: 370 LLDLDRFKVINDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPAD 429 Query: 331 EAM-ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 + A +IL PF +G E+ + S+G +L P G S ++RHAD AMY AK+ G Sbjct: 430 ARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGG 489 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSP 448 F + EM+ R + L L+ +LR+AL+ V+HYQPK+ G++ EALVRW P Sbjct: 490 NGFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHP 549 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQ 507 ++G+I P DFI AEE+GLI+ LG WV+ + RQ W+ +G+ +++AVN+SARQ Sbjct: 550 DKGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQS 609 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 +++ +L E + + +D+ELTES ++E+ + ++ + Q+G + LDDFGTGYS Sbjct: 610 DFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYS 669 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SL+ L RFPID +K+D+ F+ D+ + S+ +++ +A +L + IAEGVE+ ++ AF Sbjct: 670 SLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAF 729 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWY 654 L + QG+LF+KP+PA Sbjct: 730 LAMCECDSIQGYLFSKPLPANDLAALL 756 Score = 55.3 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 60/222 (27%), Gaps = 57/222 (25%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFN------------ 137 + A+ R L +G + +VV + I ++D GN+ N Sbjct: 62 TAMVLFFLLRNAIKRAL-YGEALFRKVVETIPTGIWVVDREGNVVDCNFAAHGLLQEFGI 120 Query: 138 RLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTC----- 192 + D G ++ G + RS + E + Sbjct: 121 QAYNDIQGY--AEIQG-------WWSDNGQPVHPDEWGISRSLS--RGETCLREKIDIAC 169 Query: 193 -KGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G R + + DITE+R+ E LR Sbjct: 170 TDGVRRTVLYTSLPLKSENGAITGAMALVQDITEKRKTDEVLR----------------- 212 Query: 252 QDLIDHAINHADNNKVGVVYL-DLDNFKKVND----AYGHLF 288 +I A + ++ D F VND + G+ Sbjct: 213 --RFRFSIEQASE---AIFWINDEGRFLFVNDQACHSLGYSA 249 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 780 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 189/588 (32%), Positives = 319/588 (54%), Gaps = 20/588 (3%) Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF-AEQVVSEAHSAI--VILDSRGNI 133 V + + ++ + D L+ L + V + + ++ D RGNI Sbjct: 228 VPFLDDRGVPYQYVSIRTDITDRIEAETALAEALQNDFRRTVQNLQNCVFKIVTDQRGNI 287 Query: 134 QR--FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 + GL ++ ++ +++F R F +E++L Sbjct: 288 TYTLCEGKIAEELGLTSERMLRKTSYEIFPYEVAEQMESYFRRAFAGESVTFELKL---- 343 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G ++ + + ++ S DITE ++A+E +R +A+ DS+T LPNR Sbjct: 344 -SGNDYYITLSPI---EENGEIVEMVGSMIDITERKKAEETIRYMAHYDSLTNLPNRTLF 399 Query: 252 QDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 + + A+ A K+GV+++DLD FK +ND GH GD LL+ V+ ++ CL + Sbjct: 400 HEKLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLLQAVANRLICCLRKEDS 459 Query: 310 LARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSD 369 ++R GGDEF + + + +A RI+T + + IE++ + S+GI++ P+ G D Sbjct: 460 VSRLGGDEFAIFLTGVTHREAGEIAQRIITSMSESITLDHIEIFITPSIGISMYPDDGDD 519 Query: 370 STAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK 429 A+++HAD AMY AKE G+ + F+ E++Q + + L L+ LRKAL+ Q +HYQPK Sbjct: 520 IEALLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLERELRKALDEKQFTLHYQPK 579 Query: 430 ITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD 488 I G++ +EAL+RW P+ GLIPP+ FI AEE+GLIVPLG WV+ +Q W++ Sbjct: 580 IHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLGEWVMRTACQQTKAWQE 639 Query: 489 KGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVI 547 G L VAVNIS RQ + + +L+E +++E+TES + N + + ++ Sbjct: 640 AGFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEITESMAL-NVDYTIRIL 698 Query: 548 QQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVA 607 + LG + +DDFGTGYSSLS L++FPID +K+DQ F+R++ P +Q++++ I+ +A Sbjct: 699 NRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL--NPQNQAIIKTIIHMA 756 Query: 608 QALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 + + VIAEGVE+ + FL + NE QG+ ++KP+P + + + Sbjct: 757 HNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEIDSFLQ 804 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 40/110 (36%), Gaps = 1/110 (0%) Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 + I D +G I N + + + +++G + ++ SR + + + + G + Sbjct: 149 VAITDDKGVITYVNDKFCEISRYEVDELVG-NTHRVINSRYHSKSFFKLMWETIKQGRVW 207 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + E+ G ++ + TDIT+ A+ L Sbjct: 208 KGEVKNRAKDGTEYWMNTTIVPFLDDRGVPYQYVSIRTDITDRIEAETAL 257 Score = 98.4 bits (245), Expect = 9e-19, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 6/130 (4%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 RD+ + LS + E+ I I D +G I N + ++IG+S + S Sbjct: 6 RDVKYALS----ALEESSV-ISITDEKGIITYVNHNFCQLSKFNREELIGKS-HNIVDSG 59 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 ++ G ++ E+ G +L + GTDI Sbjct: 60 FHPRNYFKSLWDTISRGKVWKGEMKNRGKDGTEYWLSMTLVPFMNDSGFLYQYVAIGTDI 119 Query: 224 TEERRAQERL 233 T+ + +E L Sbjct: 120 TKRKLMEESL 129 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 189/551 (34%), Positives = 296/551 (53%), Gaps = 8/551 (1%) Query: 107 SHGLSFAEQVVSEAHSAIVILDS---RGNIQRFNRLCEDYTGLKEHDVIGQ-SVFKLFMS 162 ++ ++ + + + + I D+ + N E G +G+ + + + Sbjct: 138 KRSIALRDRAIESSVNGVFIADASCADYPLIYVNPAFERILGFAPGSALGRACICRDGVP 197 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 + R Y V L + G + + + I D Sbjct: 198 GEVCNGYTDICQAISRGTEGYTV-LNLERENGAQQSVELFLAPVENESGDVTHFIGVLND 256 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVND 282 +T A++RL A+ D++TGLPNRN + D I HAI + V++LDLD FK VND Sbjct: 257 VTARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGRLTAVMFLDLDRFKLVND 316 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRL 341 +YGH GD L+R+V+ + +CL +AR GGDEF+VL + S +A+++ RL Sbjct: 317 SYGHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDLASIEDAARLAAKLRDRL 376 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 RIG +E+ S S+G+AL+P G D ++++AD AMY AKE GR +C + PEM+ Sbjct: 377 SESVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAKERGRNNYCFYGPEMDH 436 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFIS 460 L +++ LR+AL +L HYQP++ G + EALVRW+ PER L+ P +FI+ Sbjct: 437 HARRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIA 496 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQE 519 AEE+GLIVPLG V+ RQ +WR+ G L+VAVN+S Q + + +L E Sbjct: 497 VAEETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAE 556 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 +++E+TES + + + +++ + + G + +DDFGTGYSSLS L RFPID Sbjct: 557 TGAHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDT 616 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ F++ I ++V+AI+A+A++L L ++AEGVE+ + FL G QGF Sbjct: 617 LKIDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGF 676 Query: 640 LFAKPMPAVAF 650 LF + MPA F Sbjct: 677 LFGRAMPAEDF 687 >UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8A3_SHEAM Length = 751 Score = 779 bits (2014), Expect = 0.0, Method: Composition-based stats. Identities = 181/557 (32%), Positives = 290/557 (52%), Gaps = 6/557 (1%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 + L +V A ++I DS G I N E TG +VIG++ L R Sbjct: 194 KAAEEQLFLTSKVFENAIEGVMITDSNGIITEINGAFETITGYSRDEVIGKTPKLLNSGR 253 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 E R ++ + E+W G + G + +DI Sbjct: 254 HERDFFENLWRA-LKTQGHWHGEIWNRRKNGTLFAEQTSISAVYGEDGQVRCFVAVFSDI 312 Query: 224 TEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVN 281 + ++ + + LA D +T LPNR+ + + I A N ++ ++ +D+D FK +N Sbjct: 313 SLLKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLAANRKTRLALLLIDVDLFKHIN 372 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRL 341 D++GHL GD++L +S + + L + LAR GGDEF++L + + + S I Sbjct: 373 DSFGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVLLTQVRRRDDIPVILSAIQRAF 432 Query: 342 RLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 F V S S+GIA+ P+ G + ++++AD AMY AK+ GR + +T +M Sbjct: 433 DTSFDTSEGESVRLSASIGIAVYPDDGDNPDTLLKNADAAMYRAKQQGRNRHAFYTEQMT 492 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFI 459 Q + L L T LR A++N L + YQPKI R + +EAL RW E G++ P +FI Sbjct: 493 QSSMQQLRLQTALRGAVKNSALSLVYQPKINLRTRKLIGVEALCRWTDHELGVVSPAEFI 552 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQ 518 AE GL+ +G WV+ + RQ WRD+G+N R+AVN+S QL ++ +VL Sbjct: 553 PVAESIGLMPEIGLWVLKEACRQARIWRDQGLNPGRMAVNVSGSQLTGDNFADSVARVLT 612 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 + +++E+TES +++N A+ + + +G + LDDFGTGYSSLS L + P++ Sbjct: 613 QTGLSPDALELEITESVVLDNPASAIDTMDKLRGMGVSLALDDFGTGYSSLSYLRKLPLN 672 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+DQ FVR++ S ++ AI+A+ +AL L VIAEGVE+ + FL + G E QG Sbjct: 673 KLKIDQSFVRELPTDQDSGAIAMAIIAMGEALKLGVIAEGVENETQAEFLLRLGCTEAQG 732 Query: 639 FLFAKPMPAVAFERWYK 655 +LFA+P+ A ++ + Sbjct: 733 YLFARPLLASELKQLLQ 749 Score = 46.4 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 1/122 (0%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 + + I I D+ G + N+ L ++ + ++F R + + Sbjct: 80 LLQSFMDAFDEHIWIKDAEGRYRFINQSTLVSWDLSPAQILSRKDAEVFPDR-VSEYTDT 138 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 + + E + ++L K + +I + DI + A+E Sbjct: 139 DLKAVKEGHPIVVAECIDRSLDKGNIWLETIKAPMYDMDGRLLGVIGTTRDIARYKAAEE 198 Query: 232 RL 233 +L Sbjct: 199 QL 200 >UniRef50_B7HSZ4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=5 Tax=Bacillus cereus group RepID=B7HSZ4_BACC7 Length = 925 Score = 778 bits (2011), Expect = 0.0, Method: Composition-based stats. Identities = 197/639 (30%), Positives = 329/639 (51%), Gaps = 34/639 (5%) Query: 27 SDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINK 86 V+ + + + +QLS + + T+S + +L E V + Sbjct: 310 ISVVNLGDSNFSYSEGQIQLS-------QSIVDATASTLSNLLYMEKQ----EVIIEERT 358 Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 E + LS +++ A I LD GNI N G Sbjct: 359 SEITFKNKELERVITELQQLSREKEL---ILNSAGEGIFGLDLDGNITFCNPAGASMLGY 415 Query: 147 K-EHDVIGQSVFKLFMS-----RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 ++++IG+ +F +++ A+ + + + + Sbjct: 416 DIKNELIGKPSSMVFNGIEKGKKKQVASGCDEDWNLYDKTEQFF------RKDQSSFPVE 469 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 G + + + D+T+ ++ +E ++ A DS+T LPNR ++D + + Sbjct: 470 YVISSIK-EGTEIVGEVITFKDVTQRKQMEEEIKYHAYFDSLTDLPNRVLLKDRLTQGLT 528 Query: 261 HADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 +A + K+ V+YLDLD FK VND GH FGD LLR+V+ + +C+ ++R GGDEF Sbjct: 529 YAQLHAEKLAVLYLDLDRFKFVNDTLGHSFGDLLLREVANRLSACVPKSATVSRQGGDEF 588 Query: 319 LVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 + N S+ + + +R++ PF + E+Y S+GI++ P++G + ++++A Sbjct: 589 TIYLPNIKSEKEVLKVVNRVIDSFSRPFHLVDNEIYMKTSIGISIFPDNGDTTEILVKNA 648 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEV 436 DTAMY +KE + F+ M+ R FE + L+ +L KALE ++LVI+YQP+I ++ Sbjct: 649 DTAMYKSKEISGSSYHFFSEGMDTRTFESIKLENDLYKALEQEELVIYYQPQINGKTNKI 708 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RV 495 +EAL+RW E G+IPP FI AEE+GLIVP+G WV+ + RQ+ KW D+G L + Sbjct: 709 EGVEALIRWNHQEHGMIPPDKFIPIAEETGLIVPIGEWVLKEACRQLKKWHDQGSPLISM 768 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 +VN+SARQL +F +K VL+E+ I +ELTE+ ++ N E L +++ LG Sbjct: 769 SVNLSARQLEQSDLFAMVKNVLEEVELSPKYIQLELTENLIVRNTESTLKTMKKLKGLGI 828 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 + +DDFGTGYSSL L + PI +K+D+ FV+D+ K ++ I+ +A+ LNL VI Sbjct: 829 NLAIDDFGTGYSSLGYLKKLPISTLKIDKSFVQDMTKD--DAAITNTIITLAKNLNLDVI 886 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 AEGVE+ ++ FL+ QG+ F++PM A E+ + Sbjct: 887 AEGVETKEQVEFLSARNCYLMQGYFFSRPMAAEDIEKLF 925 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 778 bits (2010), Expect = 0.0, Method: Composition-based stats. Identities = 191/595 (32%), Positives = 315/595 (52%), Gaps = 37/595 (6%) Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL 127 LT+ + ++ ++ +W+ + + + +++ Sbjct: 488 LTISRDVTEIKKTQQQFHQAKWS--------------------------IDASLTPMLMA 521 Query: 128 DSRGNIQRFNRLCEDYTGLK-EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D +G + N+ D G E +V+G+++ + +E R ++ + E Sbjct: 522 DLQGRLTYANQAALDLWGYAGEEEVLGKNIVEF----QEDPQRTRIIMEILKARGVWRGE 577 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 G + V + ++ S DIT++R+ + +++ LA DS+TGLP Sbjct: 578 GRGKQKNGNGFDVELQAQVVKDQNGGPLSILASAIDITDKRKTELQIKKLAYFDSLTGLP 637 Query: 247 NRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR ++D ++ A+ A V V+ LDLDNFK +ND GH GD L+R V+ + + Sbjct: 638 NRTLLKDHMELALGQARRLNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTEC 697 Query: 305 EHDQVLARPGGDEFLVLASNTSQSALEAMA-SRILTRL-RLPFRIGLIEVYTSCSVGIAL 362 LAR GGDEF++L ++ A + + L PF ++ T+ S+GIAL Sbjct: 698 RTCDTLARWGGDEFVLLLTDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIAL 757 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 P+ G D +++ ADTAMY AK+ GR + F+ ++ ++ ++ NLR AL+ ++ Sbjct: 758 YPQDGQDPETLLKRADTAMYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEM 817 Query: 423 VIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 + YQP+I + + +EAL+RWQSPE G I P FI AEE+GLI PLG WV+ R Sbjct: 818 QLVYQPQIDLGKVRITGMEALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACR 877 Query: 482 QVAKWRD-KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Q A W+ + L VAVN+SA+Q + +K++L+E +++E+TES +EN Sbjct: 878 QGAIWQKTEASPLCVAVNLSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENM 937 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 E A+ + + +LG Q +DDFGTGYSSLS L + PID IK+ Q FVRDI ++++ Sbjct: 938 EAAIEALTELKKLGVQFSIDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAII 997 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +A +A+A++L +++IAEGVE+ ++ AFL +G + QG+ FAKPMPA + Sbjct: 998 KATIAMAKSLGMKLIAEGVENHQQLAFLLLHGCHAMQGYYFAKPMPAQEVPSFIH 1052 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 44/148 (29%), Gaps = 7/148 (4%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 + T R L ++ I ++D NI N + + G Sbjct: 365 LTLMIMRYKKTLQALRQSEGTLK---AMLESIADPIHMVDRDLNILWANDIAKQLFG--- 418 Query: 149 HDVIG-QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 +++G + L S + F L+ +R FL + Sbjct: 419 KNLVGQKCYAALHRSPTPCDPMCHAIKAFSDGHAHSSENLFFDINDEERCFLVTANVAST 478 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRI 235 S ++ D+TE ++ Q++ Sbjct: 479 DSQGQPSAVLTISRDVTEIKKTQQQFHQ 506 >UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJP5_9GAMM Length = 1092 Score = 778 bits (2010), Expect = 0.0, Method: Composition-based stats. Identities = 195/653 (29%), Positives = 320/653 (49%), Gaps = 18/653 (2%) Query: 16 SHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDL 75 ++P + D R + E + L +A QA R+ I L+ D L Sbjct: 443 GYSPEELVRTDWD--RLAVPEDRSCEAPLD-AAMQAGE-RDGYSIEKRLLRR---DGRVL 495 Query: 76 SVHLVGRKINKREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQ 134 + + + A + A + R+ A V +VI D+ +I Sbjct: 496 VADIDVKCTRTADGAIDRVVATIEDITERREQEERRRLASVVFENTREGVVITDATAHIL 555 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 NR + G + +V+G++ K+F S R A N R + ++ E+W G Sbjct: 556 SVNRAFTELMGYTQDEVVGRTP-KMFQSGRHDQAFYANMRRQLETEGHWQGEIWNRRKTG 614 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDL 254 + ++ + DI+ + ++ L LA+ D +T LPNR ++ Sbjct: 615 EIFPELQSITAVRDDQGRLTHYVSVFADISRLKASEAELDFLAHHDPLTELPNRRLLRAR 674 Query: 255 IDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLAR 312 + AI N + ++ +D+D FK +ND+ GH GD+LL+ V+ + + +AR Sbjct: 675 LAQAIALMRRRNGLLAILIIDVDRFKDINDSRGHAAGDRLLKIVADRLQAGQRGTDTVAR 734 Query: 313 PGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDS 370 DEF VLA N + +A IL + P + +E + ++GIA+ P+HG+D+ Sbjct: 735 LASDEFAVLADNLAHVDDAALVAEDILREVGRPVDLGDGVEFEIAATIGIAVFPDHGADA 794 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 +++ A TA+ AKE GRG + ++ + E + L+ LR+A+E D L +HYQP+ Sbjct: 795 ETLLQQAGTALSRAKEDGRGGYRYYSDAFTEAARERIDLNARLRRAIEQDSLEVHYQPQY 854 Query: 431 TWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 G + EAL+RW PE G + P FI AE++GLIV LG WV+ V+ Q WRD Sbjct: 855 RVSDGVLIGAEALLRWTDPELGPVSPGRFIPVAEQTGLIVELGDWVLRRVLAQGQAWRDA 914 Query: 490 GIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQ 548 G +R+AVN+SA Q I + +L+ + +++E+TES L+ + E A ++Q Sbjct: 915 GYPAVRLAVNVSALQFQRVAIDHQVADLLEGHGYPAKYLELEITESALMSDPERARRILQ 974 Query: 549 QFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI---HKQPVSQSLVRAIVA 605 + + G +DDFGTGYSS++QL RFP+D +K+D+ FV + +S+ RAIVA Sbjct: 975 RLRERGVSFAVDDFGTGYSSMAQLKRFPVDTLKVDKSFVDGLAAGAHDADDRSIARAIVA 1034 Query: 606 VAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 + L L V+AEGVE+ ++ L + G + QG+L ++P+PA F L Sbjct: 1035 LGHGLGLSVLAEGVETREQLGALRELGCDHYQGYLASRPLPAEHFAALLAEGL 1087 Score = 43.7 bits (103), Expect = 0.022, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 1/106 (0%) Query: 123 AIVILDSRGN-IQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 + I G +R N G +++ +L + + + + + + Sbjct: 420 GMAISYPGGRGWERVNPFLAQMLGYSPEELVRTDWDRLAVPEDRSCEAPLDAAMQAGERD 479 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEER 227 Y +E + G+ L + + ++ + DITE R Sbjct: 480 GYSIEKRLLRRDGRVLVADIDVKCTRTADGAIDRVVATIEDITERR 525 >UniRef50_C4L753 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L753_EXISA Length = 819 Score = 777 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 199/571 (34%), Positives = 303/571 (53%), Gaps = 11/571 (1%) Query: 98 DTPAVARDLSHGLSF-AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 T + S L E ++ A AI++ D I ++N+ D G +++GQS+ Sbjct: 251 RTASQLEAQSEELELKFESIIESASDAIIVADHNRTILQWNQGATDLFGYTTDEMVGQSI 310 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAY----EVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 + R A R R + +G VEL G + + + Sbjct: 311 VAIIP-ERFREAHERGMRRYEATGEKRVIGQTVELIGLRKDGVEVPIEMSLGTWKTDKG- 368 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYL 272 IF DI+E +R + ++ L D +TGLPNR D +D + + + + + Y+ Sbjct: 369 -IFFSSIIRDISERKRIEAQINDLVYLDPLTGLPNRRLFSDRLDALLGQSQSEQFALYYI 427 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA 332 DLDNFK +ND +GH GDQ L+ V+ I S ++ LAR GGDEF++L+ +T + Sbjct: 428 DLDNFKVINDRFGHSIGDQFLKQVTTRIQSTIQKTDTLARLGGDEFIILSPDTKSNLAAH 487 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 A ++ L PF + EV+T S+GI+L P G + +I++AD AMY AK G+ + Sbjct: 488 RAQELINVLHPPFELENEEVFTGASIGISLHPSDGDTAEELIKNADIAMYRAKADGKNGY 547 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERG 451 FT E+N+ V L LRK + + +HYQP+I E V +EALVRW PE G Sbjct: 548 QFFTNELNESVSRRSNLSMALRKGIGRGEFTVHYQPQIQLETEMVIGMEALVRWNHPELG 607 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIF 510 +I P +FI AEE+G I LG +V+ + RQ W+D I RVAVNISA Q A + + Sbjct: 608 MISPGEFIPIAEETGSIHRLGEFVLNEACRQNKAWQDASIPPFRVAVNISAVQFAQKDLP 667 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 + + L E +++ELTES I++ + A+ + + LG + +DDFGTGYSSLS Sbjct: 668 EVVSRALAASGLEAQYLELELTESV-IQSADRAIETMHELVALGVHLSIDDFGTGYSSLS 726 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L FPID +K+DQ F ++I +LV+ I+ +A L+L VIAEGVE+ + AFL Sbjct: 727 YLKLFPIDTLKIDQHFTKNIESDEKDAALVKTIIRMAHELDLNVIAEGVETENQVAFLKA 786 Query: 631 NGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 N+ QG+ + +P+PA E ++++Y K + Sbjct: 787 ESCNQAQGYFYNRPLPAEEIEVFFQQYKKAS 817 >UniRef50_Q0F2A0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2A0_9PROT Length = 644 Score = 777 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 180/573 (31%), Positives = 301/573 (52%), Gaps = 12/573 (2%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 + + L Q++ A+ A + +D+ G+I +N + E G E IG Sbjct: 68 TMLKRQQQIMESLQASKQKIRQIIDTANDAFITIDAEGSISDWNPMAEMIFGWPEDLAIG 127 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNA--YEVELWIP--TCKGQRLFLFRNKFVHSGS 209 +S+ L M++ A + + F +G+A + ++ I G + + Sbjct: 128 KSMMDLIMNQAPRNALIDDIQEFINTGSAPFTQGQIVITALHRDGHEFPAEMSISPQ--A 185 Query: 210 GKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--V 267 DI++ + +E+L LA D +TGL NR + L+ + A + + Sbjct: 186 VGASFIFNIFVRDISQRKADEEKLETLATRDELTGLINRFSYNHLLKKEVALAKRHMESL 245 Query: 268 GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ 327 V++LDLD FK +ND+ GH GDQLLR+ + + +C+ +AR GGDEFL++ Sbjct: 246 AVLFLDLDGFKNINDSLGHDVGDQLLRETANRLSACIRESDTVARIGGDEFLIIMPGIKD 305 Query: 328 SALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKE 386 + RIL + P+ IG E + S+GI+L P G + +++++ADTAMY AK+ Sbjct: 306 VHDPRFLCERILNMIGQPYLIGTQECFVGASIGISLYPLDGDNVESLVKNADTAMYQAKD 365 Query: 387 GGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRW 445 GR + FTP M + F+ + ++ LR A+E +Q + YQP++ G + +EAL+RW Sbjct: 366 SGRNAYKFFTPAMGEEAFKRMEMERALRYAIEKNQFKLLYQPQVELSSGRILGVEALLRW 425 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD--KGINLRVAVNISARQ 503 PE G I P FIS E + LI+P+G WV+ + +Q W+ G LR+AVN +ARQ Sbjct: 426 THPEWGPISPSVFISLIENTNLILPIGEWVLDEACKQNKAWQALHPGFPLRMAVNFAARQ 485 Query: 504 LADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFG 563 A + + + LQ+ +++E+TE + + EL + +Q +LG + +DDFG Sbjct: 486 FAQADLVETVAKALQKSGLAAEFLELEITEGSAMNDIELNIRKMQALKELGVSIAIDDFG 545 Query: 564 TGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAK 623 TG+SSL+ L RFPID +K+D+ F+ +I ++V I +A +L ++VIAEGVE+ Sbjct: 546 TGFSSLAYLKRFPIDILKIDKSFLDEIQHGKKDAAIVATISEMAHSLGMEVIAEGVETKY 605 Query: 624 EDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 + FL +G + QG+LF++P+P ++ Sbjct: 606 QLEFLRGHGCDMIQGYLFSRPVPPEQIAEILQK 638 >UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3M1_LEPCP Length = 745 Score = 777 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 180/593 (30%), Positives = 297/593 (50%), Gaps = 22/593 (3%) Query: 81 GRKINKREWAGNASAWHDTP---------AVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 GR I+ + A A HD P + + L A A ++I D+ G Sbjct: 151 GRSIHAQLDGLMARANHDAPLLRIALTDISERKHAESELRLAATAFE-AQEGMMITDAHG 209 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 I+R N+ TG + IGQ+ +L S R A + ++ E+W Sbjct: 210 VIERVNKAFTQMTGYSAAEAIGQT-ARLLHSGRHDPAFYAAMWDSLQRTGTWQGEVWNRR 268 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G+ + + + + DI++ + +E + LA D +TGLPNR + Sbjct: 269 KCGEVYAEWLTITAVQDEHRTVTRYVGTMLDISQRKAREEEIAQLAFYDPLTGLPNRRLL 328 Query: 252 QDLIDHA--INHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 +D ++ A I+ + ++++DLD+FK +ND GH GD LL++V+ + C+ Sbjct: 329 KDRLNQAMAISARSQREGALLFIDLDHFKDINDTRGHDKGDLLLQNVAQRLSGCVREGDT 388 Query: 310 LARPGGDEFLVLA-------SNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 +AR GGDEF+V+ ++ + S ++A +IL L LP+ + V+ S S+G+AL Sbjct: 389 VARIGGDEFVVMLGADLSTATDEAASHARSVAEKILAALNLPYLMSGEFVHCSASLGVAL 448 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 +H +++ AD AMY AK GGR F + Q + L+ LR A++ D+L Sbjct: 449 FNDHHDTVDELLKRADQAMYQAKAGGRNTLRFFDTAVQQTMMLRAALEAELRLAVQRDEL 508 Query: 423 VIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 V+ YQP I + + EALVRW+ P RGL+ P +FI AE+ GLI +GRWV+ Q Sbjct: 509 VLCYQPVIDHQNRLLGAEALVRWKHPRRGLVSPAEFIPIAEDRGLIQAIGRWVLETACTQ 568 Query: 483 VAKWRD--KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 +A W +L ++VN+SAR+L + + ++L + +ELTE+ ++++ Sbjct: 569 LATWAADPATADLVLSVNVSARELHEPQFVERVIEILACTGARPARLKIELTENAVLDHV 628 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 + +++ +++ G ++ LDDFGTG+ SLS L R P+D +K+D+ FV+D+ ++ Sbjct: 629 DDSIAKMKRLKAHGIRLALDDFGTGHGSLSLLKRLPLDELKIDRTFVQDLLTDTHDAAIA 688 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 R I A+ L + V+AEGVE+ + L G QG LF P A R Sbjct: 689 RTIAALGLNLGISVVAEGVETPAQRDLLIACGCRIFQGDLFGPPAALEALARM 741 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 13/164 (7%) Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS-----------AIVILDSRGNIQ 134 +R A + L A+ + A LD+ G I Sbjct: 33 ERRAEAMAHELQVHRIELEMQNDELRRAQIALETARDRYIDLYDFAPVGYFTLDTNGLIT 92 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 N D G ++G+ + +++ + R+ R G +EL + G Sbjct: 93 EANLTGADLLGEARAKLVGRRFER-YIAPVDRDRWHRHALSLSRRGEPGRIELLVQGAGG 151 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 + + + + + + I TDI+E + A+ LR+ A Sbjct: 152 RSIHAQLDGLMARANHDAPLLRIAL-TDISERKHAESELRLAAT 194 >UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GYS2_SHEPA Length = 1072 Score = 777 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 197/591 (33%), Positives = 308/591 (52%), Gaps = 7/591 (1%) Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 D S+ L K E A A + + L A V + I++ D+ Sbjct: 467 AKDPSLELALEVKGKDELTQIALAVNQMVSERMKSRRALHQASAVFRHSAEGIIVTDANN 526 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 +I+ N TG DV G+S L S + S N++E E+W Sbjct: 527 HIELVNPAFTKITGYTLDDVKGKSPSIL-SSAHHQEDFYQQLWRSLSSKNSWEGEIWNKR 585 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G+ + S I I DI+ ++ ++ + N DS+T LPNR+ Sbjct: 586 KGGKIYPEYLKITAVKNSKNKTIQHIGLFLDISNNKQYEQDIWYKTNFDSLTKLPNRHLF 645 Query: 252 QDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 + AI+ A N ++V + ++DLD FK +N+ +GH G+++L+ + + + L D Sbjct: 646 SSRLQQAIDSAHNTNSQVAIFFIDLDRFKFINELHGHAAGNKVLKQSATRLEAVLGPDDS 705 Query: 310 LARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSD 369 +AR GGDEF+V++ T E +A ++ L P+ E S S GIA PE G D Sbjct: 706 IARIGGDEFVVISPQTGNVGAEQLAQKLSDTLAKPYLFDNKETIISSSFGIAFYPEDGQD 765 Query: 370 STAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK 429 ++ +++TAMY AK GR + F+PEMN + E + L+ LRKA++ + + YQP Sbjct: 766 IEMLLHNSETAMYQAKRDGRAHYQYFSPEMNVEMLERMHLEQRLRKAVKQSEFYLEYQPV 825 Query: 430 ITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD 488 I GEV S+EALVRWQ P+ G+I P FI AEE+GLI PLG W++ + +A+W Sbjct: 826 IDMHSGEVTSVEALVRWQDPDYGVISPQAFIPIAEEAGLIEPLGEWILQQALSDLAQWHA 885 Query: 489 KGINLRVAVNISARQL---ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALS 545 +G+ L++A+N+SARQ D + F LKQ L + + + +E+TES LIE+ L Sbjct: 886 QGLMLKMAINVSARQCIHSRDISFFDILKQTLAKHDIAAENLHIEITESMLIEDKPQCLQ 945 Query: 546 VIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVA 605 ++ QLG ++LDDFGTGYS+LS L + PI IK+D+ F+ + P L++AIV Sbjct: 946 TLESIKQLGVDIYLDDFGTGYSALSYLTQCPISVIKIDKSFIDNALDNPSDAKLIKAIVM 1005 Query: 606 VAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 +AQ+L + ++AEGVE+ ++ FL G + QG+L +KP+ + + Sbjct: 1006 MAQSLEMPLVAEGVETVEQWHFLRNLGCDYAQGYLMSKPLAKAELVEFLRH 1056 >UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAW8_ALHEH Length = 1051 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 186/563 (33%), Positives = 291/563 (51%), Gaps = 8/563 (1%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A + + + AE+V + AI+I D+R I R NR + TG +V+ Sbjct: 474 ALDNIEREQARKAAEEQMRLAEEVFEHSTEAIIITDARQRIMRVNRAFTERTGYVPDEVL 533 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G+ L RR R +E E+W G+ L+ V Sbjct: 534 GRRPHMLRSPHHTQQFYRRIL-ARLRRHGFWEGEIWNRRKGGENAPLWLTLSVVRDEAGR 592 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVV 270 I G D+TE + + +R LA D +TGLPNR + D + A+ A + ++ ++ Sbjct: 593 ITHYIAVGLDLTETKDREAHIRYLAQHDPVTGLPNRGLLADRLGQALRRAQDQHYRLALL 652 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-A 329 LDLD FK +N+ GH+ GD++L+ V+ + + ++R G D+FL+L + Sbjct: 653 SLDLDRFKIINETLGHVAGDEVLQTVAQRLQDHVNGAGTVSRIGSDQFLILLPEIHKPTE 712 Query: 330 LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAK-EGG 388 A R++ + P + E+ S VGIAL PE G + + HAD AM AK G Sbjct: 713 AAQAAERLMACVAEPLDLSGQELTPSSVVGIALYPEDGDNLETLHSHADAAMSMAKQASG 772 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQS 447 + F+ +M R E L L++ LR+AL+ + +HYQP+++ G + +EAL+RW + Sbjct: 773 HEGYRFFSSDMTSRARERLSLESRLRRALDRGEFRLHYQPQVSLADGTLTGMEALLRWHA 832 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLAD 506 + G I P FI AEE+GLIVPLGRWV+ + RQ WR G+ L V+VN+S QL Sbjct: 833 GDEGDISPARFIPIAEETGLIVPLGRWVLGEACRQNRAWRQAGLPALPVSVNLSVVQLRR 892 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLI-ENDELALSVIQQFSQLGAQVHLDDFGTG 565 + +++ L+ + +E+TES + E+D ++ Q ++G + +DDFGTG Sbjct: 893 SDVVADVRRALETSGLPGDGLHLEVTESLFLSEDDPAVVTGFQTLREMGISLAIDDFGTG 952 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YS+L L R PI +K+DQ FVR I ++ +AI+++A++L L VIAEGVE+A E Sbjct: 953 YSNLGYLKRLPIAKLKIDQSFVRGIGDSGHDTAINQAIISIARSLGLGVIAEGVETAAEL 1012 Query: 626 AFLTKNGINERQGFLFAKPMPAV 648 L G +E QGF +++P+ A Sbjct: 1013 RVLQALGCDEIQGFYYSRPLDAE 1035 Score = 71.8 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 49/144 (34%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A DL+ E + + IV LD NR E +TG+ + Sbjct: 169 ARRLRTELMAQADLAARERAYETLAENSPDIIVRLDRDLRHLYVNRALEAFTGIPREHYL 228 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G++ ++ + A R+ SG + P +G+ + N Sbjct: 229 GRTHEEVGFRGKLLATWERHLNQALESGEPGTMTFSHPDREGRVRHFEALIVPETDDTGN 288 Query: 213 EIFLICSGTDITEERRAQERLRIL 236 ++C D+T +A+E + L Sbjct: 289 IAHVLCISHDVTGHVQAREEISRL 312 >UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=Methylococcus capsulatus RepID=Q602I2_METCA Length = 710 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 188/569 (33%), Positives = 291/569 (51%), Gaps = 11/569 (1%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 A + L A V S + ++++++ I N TG DV+G+ Sbjct: 135 LQREIAEHKAAREQLQVAGMVFSASSEGMLLVNADNRIVAVNPAFVALTGYGPEDVVGKD 194 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 KL S R A + + + E+W G+ Sbjct: 195 P-KLLQSGRHGPAFYQAMWAALEATGTWRGEIWNRRRNGEEYAEHLTINTIYDEAGKVHL 253 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLD 273 + +DITE++ ++ + + D++T LPNR + + + A A D +V ++Y+D Sbjct: 254 RVALFSDITEKKASEALIEFQSCYDALTRLPNRRLLAERLALASERAHRDRGRVALLYID 313 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVL--ARPGGDEFLVLASN-TSQSAL 330 LD+FK+VND GH GD LL V+ + C+ + + AR GGDEF V+ + + Sbjct: 314 LDHFKEVNDTLGHHQGDALLVQVAHRVRRCVRESETVTVARLGGDEFTVIVPDFEGMDEV 373 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 E +A I+ L PFR+G + S S+GI + P+ +D+ ++R+AD AMY AK GR Sbjct: 374 ERLARAIIDSLSEPFRLGDQLAHVSASIGITVFPDDAADTDGLLRNADQAMYAAKRAGRN 433 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPE 449 + F PEM + + + L LR A++ QL +HYQP + G VR EAL+RW+ PE Sbjct: 434 GYQAFNPEMQRAMSMRVRLSQALRDAVQAGQLRLHYQPIVELASGRVRKAEALLRWEHPE 493 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLA--D 506 G + P FI AE+ G I +G WV Q A+WR + G + +V++N+S RQ Sbjct: 494 FGEVSPAAFIPIAEDCGSIHCIGDWVFERAACQAARWRSRFGTDFQVSINVSPRQFQAGG 553 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 + + L EL + + +E+TE+ L++ D+ + QF G Q+ LDDFGTGY Sbjct: 554 RDF-GRWLERLGELGLDGSMLALEITETLLMDTDQAIADKLAQFRAAGVQIALDDFGTGY 612 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSL+ L F ID +K+D+ FVRD+ S L AIV +A L L+VIAEGVE+ ++ A Sbjct: 613 SSLAYLKEFRIDYLKIDRTFVRDMTPDSKSFLLSEAIVTMAHRLGLKVIAEGVETPQQYA 672 Query: 627 FLTKNGINERQGFLFAKPMPAVAFERWYK 655 L + G + QG+LF++P+P AFE + Sbjct: 673 LLERIGCDYFQGYLFSRPLPEDAFEGLLR 701 >UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MBY4_DIAST Length = 790 Score = 777 bits (2007), Expect = 0.0, Method: Composition-based stats. Identities = 197/600 (32%), Positives = 309/600 (51%), Gaps = 16/600 (2%) Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL 127 L ++ + V + + + A +A A A VV +V+ Sbjct: 200 LALESEPDHLVCVLQSLREVHAARDAQAL---------SEQRWRLAATVVDNTIEGVVVT 250 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 D+ G I N G E +++GQ+ ++F S R A R ++ E+ Sbjct: 251 DADGRILSVNPAVTRLMGYTEEELLGQNP-RVFKSGRHGPAFYEAMWDTMRQTGHWQGEI 309 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPN 247 W G+ + G+ +C TDI+EE+ +RL LA+ D +TGLPN Sbjct: 310 WNRRKNGEVFPERMSLSAVRGADGAVTHYVCMFTDISEEKAQHQRLEFLAHCDPLTGLPN 369 Query: 248 RNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLE 305 R + +D A+ A ++ ++ L+LD FK VND+YGH GD++LR ++ + L Sbjct: 370 RAWFGEQLDSAVRQAQDSGEQMALLLLNLDRFKDVNDSYGHAVGDEVLRHITRQVEQSLR 429 Query: 306 HDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALS 363 +L R GDE VLA + + A+A ++ P+ I+V SVGI + Sbjct: 430 PGDLLGRLAGDEIAVLARHLRHADGAAAVARHLIAAASTPWCTPDGIQVVVGVSVGICMF 489 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P H + A+++ A +++Y AK GRG +C F + Q E L ++ LR AL L Sbjct: 490 PAHARTTEALLQGAHSSVYGAKARGRGAYCFFDESLIQAARERLEIEARLRVALAQGHLR 549 Query: 424 IHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 ++YQP++ G + EALVRW P+ G+I P FI AE SG+I PLG+WV+ Q Sbjct: 550 LYYQPQVCIVTGRIMGAEALVRWLDPQEGMISPARFIPVAETSGVIGPLGQWVMRAACEQ 609 Query: 483 VAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 +WR G+ +R+A+N+S RQ + + L+ F +++ELTES L E + Sbjct: 610 GQRWRADGLPEIRLAINLSPRQFQLTDVAACAAEALKASGFPARCLELELTESVLAERPD 669 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 +V+Q+ QLG ++ +DDFGTGYSSL+ L RFPID +K+DQ F+RDI + ++ Sbjct: 670 EIRAVLQRLQQLGVRMAVDDFGTGYSSLAHLKRFPIDVLKIDQGFIRDIPRSADDMAISA 729 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 AIVA+ +L L V+AEGVE+ ++ AFL + G + QG+L ++P+PA F R + + A Sbjct: 730 AIVAMGHSLGLSVLAEGVETPQQLAFLRERGCDAYQGYLCSRPLPAEEFARLLQAHNGMA 789 Score = 45.3 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 8/135 (5%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAA-AS 169 EQV+ A + + L G + N ++ G+ H+ + Q F+ + ++ A Sbjct: 102 RRVEQVLRHAPAGMARLSMDGRLVWANERLREWLGVAPHEPLPQVDFRTLVRPHDSDWAQ 161 Query: 170 RRNNRVFFRSGNAYEVELWIP-TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 R+ R+ + Y+ E W G +L + L+C + E Sbjct: 162 RQLQRLRAGEIDHYQGERWCRNQRDGSQLPVLCTVSHVLALESEPDHLVCVLQSLREVHA 221 Query: 229 AQ------ERLRILA 237 A+ E+ LA Sbjct: 222 ARDAQALSEQRWRLA 236 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 776 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 185/571 (32%), Positives = 301/571 (52%), Gaps = 7/571 (1%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 S +R+ A VV +V+ D+ I N G E ++ Sbjct: 317 RISGLLSDQTASREADERSRLASTVVDNTIEGVVVTDAHSRILSVNHAFTKLLGFSEAEM 376 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 +G++ ++F S R A + ++ E+W G+ + + Sbjct: 377 LGKTP-RMFKSGRHDKAFYDAMWASMHATGHWQGEIWNRRKNGEVFPERMSLSAVKDAND 435 Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA--INHADNNKVGV 269 +C TDI+ E+ +++L LA+ D++TGLPNR+ ++ A ++ + N ++ V Sbjct: 436 KVTHYVCMFTDISAEKAREQQLEFLAHRDTLTGLPNRSQFTRMLGEAVELSQSTNRRMAV 495 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQS 328 + ++D FK VND+YGH GD++LR VS+ + L H ++ R GDE V+A + + Sbjct: 496 LLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQGALRHGDIIGRLAGDEICVVAQSICGRD 555 Query: 329 ALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEG 387 + +A R++ P+ + V S S GI L P+H + +++ A A+Y AK Sbjct: 556 SAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGICLYPDHALTADDLLQGAHAAVYGAKAR 615 Query: 388 GRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQ 446 G +C F M Q E L L+ LR+ALE + ++YQP+I G + EAL+RW Sbjct: 616 GSNAWCFFHENMTQAARERLALEARLRRALELGHMRLYYQPQIELATGRLVGAEALLRWL 675 Query: 447 SPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLA 505 PE GLI P FI AE SG+I PLG WV+ + RQ +WR G+ L +AVN+S Q Sbjct: 676 DPEEGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQQWRAAGLPDLAIAVNVSLHQFL 735 Query: 506 DQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTG 565 I A + L + F +++E+TES L E E AL+V+ + +LG ++ +DDFGTG Sbjct: 736 LTDIAGATAEALNKSGFPASLLELEITESALAEKPEEALAVLNRLRELGLRLAIDDFGTG 795 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YSSL+ L RFP+D +K+DQ F+RDI ++ +++A+ A+ L+V+AEGVE+ ++ Sbjct: 796 YSSLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSVIALGHAMGLKVLAEGVETQEQL 855 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 +FL + G + QG+ ++P+PA F R ++ Sbjct: 856 SFLQQKGCDYFQGYFCSRPLPAEDFTRLLEK 886 >UniRef50_A1ASK8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=A1ASK8_PELPD Length = 858 Score = 776 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 190/533 (35%), Positives = 309/533 (57%), Gaps = 7/533 (1%) Query: 130 RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA-YEVELW 188 G ++ +N E + G + IG+++ L + A +R +G A E Sbjct: 167 DGTVRYWNLASELFYGYSAGEAIGRNLLDLVIPEGMRAEEKRRMLRMAETGRADPPSEQC 226 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 + G R+ + V G+ DI+E + +E+L LA D +TGL NR Sbjct: 227 LLRRDGSRITVLSCHAVVRRPGEAPELY-GLDIDISERKINEEQLEYLATHDELTGLANR 285 Query: 249 NAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 D ++ ++++A + V V+ LDLD FK +ND+ GH FGD+LL V+ + + Sbjct: 286 ALFHDRLEQSLHYAKRSGRIVAVLLLDLDRFKIINDSLGHSFGDRLLSAVAQRLDRVVRD 345 Query: 307 DQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPE 365 +AR GGDEF++L + ++ + +ASRIL L +P RI E+ S S+GI+L P+ Sbjct: 346 TDTVARLGGDEFVLLLAEVTEPDDVGLLASRILHELAVPHRIEGREIVMSASLGISLYPK 405 Query: 366 HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIH 425 D + +IR+AD AMY AK+ G G F + PEMNQR E + +++ LR ALE + ++ Sbjct: 406 DSGDGSTLIRNADIAMYRAKQEGGGVFSFYAPEMNQRAMETMEIESALRLALERGEFTLY 465 Query: 426 YQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 YQPK+ G + EAL+RW P RG++ P DFI AEE+GLIVP+G WV+ + RQV Sbjct: 466 YQPKVDLASGRISGCEALIRWLHPRRGVVAPADFIPLAEETGLIVPIGTWVLKEACRQVR 525 Query: 485 KWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 W+ +G+ + VAVN+SARQ + +++VL E + +++E+TES ++ + Sbjct: 526 AWQAEGVPIANVAVNLSARQFRTGDLPGLVREVLGETGLDPHLLELEMTESMVMADHAQV 585 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 ++V+++ + +G ++ LDDFGTGYSS + L+ FPI+ +K+D+ F++ I P S ++ +I Sbjct: 586 VAVMEELTAIGVRLSLDDFGTGYSSFAHLSHFPINHLKIDRSFIKQIVTDPNSATIATSI 645 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 +A+A + L+ IAEGVE+ + A+L K G +E QG+L ++P+PA + +R Sbjct: 646 IAMAHRMRLKAIAEGVETEAQLAYLRKQGCDEIQGYLLSRPLPASEYAALVRR 698 >UniRef50_Q39X25 Diguanylate cyclase/phosphodiesterase n=2 Tax=Geobacter RepID=Q39X25_GEOMG Length = 633 Score = 776 bits (2006), Expect = 0.0, Method: Composition-based stats. Identities = 178/437 (40%), Positives = 268/437 (61%), Gaps = 6/437 (1%) Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFK 278 ++ E RA+ER+R +A DS+TGLPNR D + ++ A +K + V++LDLD FK Sbjct: 180 EEVAERSRAEERIRQMAYYDSLTGLPNRRLFNDRLRQSLALAQRHKRPLAVMFLDLDRFK 239 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLE-HDQVLARPGGDEFLVLASNTSQ-SALEAMASR 336 +ND GH GD+LL V+ + +C +AR GGDEF++ S S +A + Sbjct: 240 LINDTLGHAVGDRLLMAVAKRLRNCCRREGDTVARQGGDEFIINLSAISDVKDAFTVAQK 299 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 I+ R PF I E++ + S+GI++ P G A++++AD AMY AKE GR +F Sbjct: 300 IIDVFRTPFVIDGYELFITTSIGISVYPHDGRSGDALVKNADVAMYRAKEQGRNNCQLFA 359 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPP 455 PEMN R FE L L+ ++R+ALE D+ V+HYQPK+ G++ +EALVRWQ P GL+PP Sbjct: 360 PEMNARAFERLSLENDMRRALERDEFVLHYQPKVNVEHGQIACMEALVRWQHPSMGLVPP 419 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALK 514 FI AEE+GLIVPLG WV+ +Q W+D G ++VAVN+S RQL + + Sbjct: 420 SRFIPLAEETGLIVPLGEWVLRTACQQNRAWQDAGYPTMQVAVNLSPRQLRQGDLSETVA 479 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 +VL E + +E+TES L+++ E + ++ ++G ++ +DDFGTGYSSL L + Sbjct: 480 RVLAETGLAPGWLVIEVTESILMDDAEETIRTFRRLDRMGVRISIDDFGTGYSSLHYLKK 539 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 FP+ +K+D+ FVR+I P +++ A++++A+ LNL V+AEGVE+ ++ L Sbjct: 540 FPVHTLKIDRSFVREIASNPDDEAIAGAVISMAKGLNLGVVAEGVETVEQMEVLRALNCR 599 Query: 635 ERQGFLFAKPMPAVAFE 651 QGFLF++P PA F Sbjct: 600 YMQGFLFSEPAPAEQFT 616 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 776 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 174/558 (31%), Positives = 289/558 (51%), Gaps = 6/558 (1%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + L A+ ++ A++I D I N TG +V+GQ+ + Sbjct: 495 LKRTQENLDLAKYILDTTSDAVIITDVNNRIIDVNHAYTKITGFSRDEVMGQNPQVVHNE 554 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 + A R + + G + E+W G+ + F + D Sbjct: 555 EQGEAFYSRIWQSLLQEGR-WSGEVWERRKNGELYPKWMTMRRMLNQYGETAFFVGVFVD 613 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKV 280 I+ ++ +E++ LA D +T LPNR + + +I A VGVV LDL+ FK + Sbjct: 614 ISTQKATEEQMERLAYYDPLTKLPNRALFHERLTQSITTAKRYKRHVGVVMLDLNRFKLI 673 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILT 339 N++YG+ GD LL V+ I+ L ++AR G D F + + Q + +A+ +L Sbjct: 674 NESYGYGVGDGLLIQVAERIVERLRESDIVARIGADTFAITLVDLKQEGEITGVANNLLK 733 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 + +PF + E+ ++GI L P G D+ ++RH + A+ AK+ G + ++ EM Sbjct: 734 QFVMPFLVNGHELMLRTAMGIVLYPTDGQDAETLLRHVENALGQAKQQGVNNYRFYSEEM 793 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDF 458 + + L L+ + ALE V++YQPK+ RG V +E+L+RWQ ++G+I P++F Sbjct: 794 SNISNKRLALEQEMHTALEQRDFVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPVEF 853 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTIFTALKQVL 517 I AEE+GLIVP+G W++ + + D G VAVN+SARQ + + ++ + L Sbjct: 854 IPVAEETGLIVPMGLWILETACAEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETL 913 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 + ++ E+TES ++ N E ++ + +G + +DDFGTGYSSLS L RFPI Sbjct: 914 NNSAIDPSMLEFEITESMMMGNVEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPI 973 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 + +K+DQ F+RD+ ++V AI+++AQ LNL V+AEG E A++ FL + G Q Sbjct: 974 NTLKIDQSFIRDLGVDSDDAAIVSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQ 1033 Query: 638 GFLFAKPMPAVAFERWYK 655 G+ F++P+P ER K Sbjct: 1034 GYYFSRPLPQTDLERLLK 1051 >UniRef50_Q47FQ3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q47FQ3_DECAR Length = 1093 Score = 775 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 207/704 (29%), Positives = 346/704 (49%), Gaps = 65/704 (9%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + ++ + L + P + + V FS E T + E R Sbjct: 388 RVFQQCNRRFEELYGYGPGELTGKPTRVTYFSDKAHAEIGTT---AYEMLGRGETFV--- 441 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARD-----LSHGLSFAEQV 116 S ++ + + + + GR I+ + S W+ +R L + + Sbjct: 442 -SEVVHRRQNGDPIWMRITGRAIDPAN-PNDGSIWNYEDITSRKVAEDSLRESVMLQRAI 499 Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR-- 174 ++ A I+ DS G + N E +++G++ + F R E RR Sbjct: 500 LNSAKLMILSTDSEGRVISCNPATEQMLAYPSAELLGRTPVECFFLREEIQERRRALSSE 559 Query: 175 -------------VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 R G+ + + G++ + + K + + Sbjct: 560 TGFDPASDIDVLLARVRLGSVDQGQWTFQRKDGEKFIVELSISALHPEDKKAQGFLFVAS 619 Query: 222 DITEERRAQE--------------------------------RLRILANTDSITGLPNRN 249 DITE +RA++ +LR LA+ D++TGL NR Sbjct: 620 DITERKRAEDALLRSRDELELRVKERTSELESEVLERRRIESKLRYLAHHDALTGLANRT 679 Query: 250 AMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHD 307 +Q + A+++A D+ KV ++++DLD FK +ND+ GH GD LL++V+ + L + Sbjct: 680 LLQQRLGEAMDNAAQDDTKVAILFIDLDRFKTINDSLGHHIGDTLLKNVASRLTETLRSN 739 Query: 308 QVLARPGGDEFLVLASNTSQSALE-AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEH 366 +AR GGDEF+++ + AL +AS+IL LR P RI E++ + S+GI P Sbjct: 740 DTIARLGGDEFMIILPLKANEALAGKLASKILDALRPPIRIDGHELFVTPSIGICFYPND 799 Query: 367 GSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHY 426 G A++R+ADTAMY AK GR +C FT EMN Y ++++LR+A++ ++ + Y Sbjct: 800 GVTVNALMRNADTAMYQAKANGRNTYCYFTAEMNAAADNYFQIESDLRRAVDRNEFEVFY 859 Query: 427 QPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAK 485 QP I + + S EALVRW+ P +GL+ P FI+ AEESGLI +G V+ Q+ Sbjct: 860 QPVIDLKTHRITSYEALVRWRHPTKGLVGPAQFITVAEESGLIGEIGTIVLRQACSQLRS 919 Query: 486 WRDKGINLRV-AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELAL 544 W D+G + A+N+S Q D + + ++L++ + I++E+TE+ ++++ ELAL Sbjct: 920 WIDEGFTSPILALNLSPIQFNDPNLTEGICRILRDYDLTPDRIELEITETVIMQDGELAL 979 Query: 545 SVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIV 604 +Q S G ++ +DDFGTGYSSL+ L RFP+D +K+D+ F+ D+ +++V AI+ Sbjct: 980 GTLQNLSSRGFRLSIDDFGTGYSSLAYLKRFPVDTLKIDRSFITDMTANENDRAIVTAIM 1039 Query: 605 AVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAV 648 A+A +L+L VIAEGVE+ ++ L+ N QG+ AKPMPA Sbjct: 1040 ALANSLHLSVIAEGVETKEQYDLLSALNCNFAQGYYMAKPMPAE 1083 Score = 73.8 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 2/140 (1%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 + R+L + + + + A IV + R + R NR E+ G ++ G Sbjct: 103 DISERKQAERNLHETVQELQSIFNNASVGIVFTNRR-TVLRCNRRFEEIVGYASDELHGM 161 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 L+ S R + +G A+ G ++ + Sbjct: 162 PTANLYASAESHEELGRQSSPLLSAGKAFSATKQFRRKDGHLIWC-QVFAKAIDPNDPSR 220 Query: 215 FLICSGTDITEERRAQERLR 234 ++ D+TE +E L Sbjct: 221 GIVWIAADVTEAVSTREALE 240 Score = 72.2 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 3/117 (2%) Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 + A I+ G I R+N + G ++IG+S +L S A Sbjct: 2 NNAPVGILYT-KNGEILRYNAKFSEIFGFD-TEIIGKSARQLCPSDAAYEALGEVAGPIL 59 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 +G + E+ + G + ++ I DI+E ++A+ L Sbjct: 60 SAGKPFHQEIQLRHHDGHTFWADAVAYLF-DPRHPAEGTIWIINDISERKQAERNLH 115 Score = 71.1 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 3/148 (2%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A+ + + L E +++ + IV+ I R+N+ G + I Sbjct: 226 AADVTEAVSTREALEKSSREMEALMANSSVGIVVT-HDRKIVRYNQRFGKLFGFPGENGI 284 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G L+ S E R ++ EL++ G +++ +V + Sbjct: 285 GMDTAGLYRSAEEHTELNRRAAPALFQAKPFQTELYMRRQDGSDIWVNLIGYVADPTD-P 343 Query: 213 EIFLICSGTDITEERRAQERLRILANTD 240 + + D T ++A+E L+ A D Sbjct: 344 SMGVFWIAEDRTAFKQAEEELKK-AYFD 370 Score = 67.6 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 5/146 (3%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 A + +A+ + + + I + Q+ NR E+ G Sbjct: 350 IAEDRTAFKQAEEELKKAYFDQRL---IFDNCVAGIAFV-RNRVFQQCNRRFEELYGYGP 405 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 ++ G+ + S + A G + E+ G +++ Sbjct: 406 GELTGKPTRVTYFSDKAHAEIGTTAYEMLGRGETFVSEVVHRRQNGDPIWMRITGRAIDP 465 Query: 209 SGKNEIFLICSGTDITEERRAQERLR 234 + N+ I + DIT + A++ LR Sbjct: 466 ANPND-GSIWNYEDITSRKVAEDSLR 490 >UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607V4_METCA Length = 819 Score = 775 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 170/576 (29%), Positives = 283/576 (49%), Gaps = 10/576 (1%) Query: 84 INKREWAGNASAWHDTPAVARDL-SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 R A +A R L + A + AI+I D+ G +QR N Sbjct: 240 FASRPGAPDAVLAVTRDVTERKLAEEAVRLAATAFETS-EAIMITDAAGIVQRVNSGYSA 298 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 TG +++G L E S R + + ++ EL G ++ + Sbjct: 299 ITGYTSDEIVGTPSEFLHPGGEEGKTSPRAILEALKGTDCWKGELTARRKNGDVCPVWLS 358 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA 262 + + + DI+E +RAQ+ + LA D +TGLPNR + ++ AI + Sbjct: 359 IKAVRNDEQILTHYVVTFVDISERKRAQQEIEQLAYFDPLTGLPNRRLFLERLNQAIGES 418 Query: 263 --DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV 320 + ++ ++++DLD FK +NDA GH GDQLLR V+ + + ++AR GGDEF++ Sbjct: 419 CVNGSRCSLLFVDLDRFKHLNDARGHTVGDQLLRKVAERLSEGVGRGGMVARLGGDEFVI 478 Query: 321 LASNTSQSALEA------MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAII 374 L + + A +A + L+ PF + + Y + S+G A+ P + ++ Sbjct: 479 LLNGLDEEFESACRRTMDVAENLRVILQRPFVLSSGQHYVTASIGTAIYPFDTDSADDLL 538 Query: 375 RHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG 434 + AD AMY AK GR + M L L+ ++ ALE + ++ Q ++ G Sbjct: 539 KAADMAMYEAKASGRNTVRAYASTMQAAAETRLTLERDMHAALERREFRLYLQSQVDGNG 598 Query: 435 EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR 494 + EAL+RW+ P G++ P FI+ AEE+GLI+P+G WV V + + G L Sbjct: 599 RIVGAEALLRWEHPTEGILLPDKFIALAEETGLILPIGEWVFEQVCHENVRLSQAGHRLS 658 Query: 495 VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLG 554 ++VNIS R+ ++++L+ + E+TE L+ + + A++ + +LG Sbjct: 659 LSVNISPRRFQQADFLDHVQRILKRTGANPHDLIFEITEGLLVSDFDDAIAKMSFLERLG 718 Query: 555 AQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQV 614 + +DDFGTGYSSL+ L R P+ +K+ Q FV D+ P +LV+ I+++A LNL+ Sbjct: 719 IRFSVDDFGTGYSSLAYLKRLPLSELKIAQTFVNDLPDDPSDVALVQTILSMAYHLNLET 778 Query: 615 IAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 +AEGVE+ + FL G QG+ F+ P+PA F Sbjct: 779 VAEGVETRAQLEFLKARGCTRFQGYYFSPPLPATEF 814 Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 50/163 (30%), Gaps = 6/163 (3%) Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF 136 + + R+ + + L ++ + + + G + Sbjct: 115 IPRALEIPSPRQLLELNQHLASEVSERKQAEQRLRM---LIDAEPECVKTVGADGTLLDM 171 Query: 137 NRLCEDYTGL-KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQ 195 NR +V G+ + L + N RV E ++ KG Sbjct: 172 NRAGLQMIEAESIEEVRGKPITSLVAPQDVERFKAFNQRVLAGESGILEFQIIGL--KGG 229 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 R +L + + ++ D+TE + A+E +R+ A Sbjct: 230 RRWLESHAVPFASRPGAPDAVLAVTRDVTERKLAEEAVRLAAT 272 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 775 bits (2003), Expect = 0.0, Method: Composition-based stats. Identities = 188/560 (33%), Positives = 309/560 (55%), Gaps = 8/560 (1%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 R+ + +V ++ AI++ D G I +N E G + +VIG SV L Sbjct: 145 ERREADAYKAQLAAIVESSNDAIIVQDLNGIITSWNAGAEGLFGYRASEVIGSSVEILIP 204 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR-LFLFRNKFVHSGSGKNEIFLICSG 220 + + +SG + + KG++ + + N I Sbjct: 205 P--DLREEEGDIMCLIKSGRRADHFETVRWGKGRKPIDVSVTISAMKDRAGNIIGASKIV 262 Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFK 278 DIT+ + +QER+ LA+ DS+TGLPNR + D + AI +A ++ ++++D+D FK Sbjct: 263 RDITQRKESQERIEYLAHYDSLTGLPNRTLLSDRLRIAIENARRYSIRLALLFVDIDRFK 322 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRI 337 VND+ GH GD+LL+ V+ + S + ++R GGDEF+VL S + A ++ Sbjct: 323 LVNDSLGHEIGDKLLKAVAQRMQSTVRQADTVSRVGGDEFVVLLSRIETATDAARSAEKL 382 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 +T + P++I E+ + S+GI++ P++G D++++ R+AD AMY+AK GR ++ ++ Sbjct: 383 ITSISQPYQIEEHELLLTASIGISIYPDNGKDASSLTRNADAAMYSAKGQGRNRYQFYSE 442 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPL 456 ++ E L L+ +LR AL D++ YQP+I G V +EAL+RW +GLI P Sbjct: 443 DLTYAAAERLRLEHDLRGALSRDEIFPLYQPQIELATGRVIGVEALMRWNRAGQGLISPA 502 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTIFTALKQ 515 FI AE+SGLI+ LG +++ Q +W + +G +AVN+SA Q + + Sbjct: 503 SFIPVAEDSGLILALGEYILRKACLQARQWHEHQGFQGTIAVNVSAVQFRQNDFTDVVLR 562 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 VL E F +++E+TES +++ E + + G ++ +DDFGTGYSSLS L +F Sbjct: 563 VLSETGFPPECLELEVTESVVMQGLESVVQKMGILESHGIKLAIDDFGTGYSSLSYLRQF 622 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 ID +K+DQ FVRD+ +Q+++RAIVA+ ++L L+V+AEGVE+ + FL E Sbjct: 623 AIDRLKIDQSFVRDLPGDADAQAIIRAIVAMGRSLGLRVMAEGVETEAQARFLQDIECTE 682 Query: 636 RQGFLFAKPMPAVAFERWYK 655 QG+L+A+PM + FE W K Sbjct: 683 SQGYLYARPMKSNDFEAWLK 702 >UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP3_DICDC Length = 685 Score = 775 bits (2002), Expect = 0.0, Method: Composition-based stats. Identities = 187/561 (33%), Positives = 281/561 (50%), Gaps = 10/561 (1%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 + + A V +H AI + D+ NI N TG DV G++ Sbjct: 121 SERKKTHEQQQIAAAVYDASHEAIFVTDADNNIISVNPAFSRLTGYHFDDVNGKNPRMFK 180 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 SR + G + E+W G V + + I + Sbjct: 181 SSRHPPSFYAEMWHALHEKG-LWIGEVWDRHKNGHDYLKELTVTVIRDAAGHIINHVGMF 239 Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFK 278 +DIT ++ +E + AN D+IT LPNR+ Q ++ A HA N + ++ +DLD+FK Sbjct: 240 SDITLRKKQEELIWRQANYDAITDLPNRHLFQSKLEQAAQHARRTGNLMALMLIDLDHFK 299 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVL-ARPGGDEFLVLASNTSQS-ALEAMASR 336 VND+ GH GD LL VS ++ ++H + AR GGDEF V+ S+ Q +A+A Sbjct: 300 AVNDSMGHRAGDMLLTRVSQRLIDSVQHADTIIARLGGDEFAVIISDLFQPHDCDALAKA 359 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 +L L PF I ++ S S+GIA P + A+ ++AD AMY AK GR F ++ Sbjct: 360 LLENLSHPFNIDGENMFVSASIGIACFPTDSDNLEALFKNADQAMYAAKNAGRNGFSYYS 419 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPP 455 P ++ L + +LRKA+ +Q ++YQP + G + EALVRW P GL+ P Sbjct: 420 PALHDAARTRLRMTNDLRKAIREEQFEVYYQPIVALDTGHITKAEALVRWHHPTHGLVSP 479 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTIFTA-L 513 +FI AEE+G+I+PLG WV + Q+A+WR ++ +N+S QL Q Sbjct: 480 AEFIPLAEETGIIIPLGNWVARQAIAQLARWRQFCDPRFQMTINLSPIQLRSQDFADMDW 539 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 + L I +E+TE L+ + + F G Q+ +DDFGTGYSSL+ L Sbjct: 540 LRELDRHGLSGDAIAIEITEGLLLNAEPRVNRNLHMFRDAGIQIAIDDFGTGYSSLAYLR 599 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RF ID +K+D+ F+ D+ V L AIVA+A +L LQV+AEGVE+ ++ A L + G Sbjct: 600 RFNIDYLKIDRSFIEDM--DGVGHELCVAIVAMAHSLGLQVVAEGVETLQQSAMLKRIGC 657 Query: 634 NERQGFLFAKPMPAVAFERWY 654 + QGFLF++P A + Sbjct: 658 DYAQGFLFSRPQSAADITQLL 678 Score = 84.6 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 5/133 (3%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 S + ++ I ++D GN N + G + +++ +S +F + + Sbjct: 10 SLFQAILDRCPVGIAVIDYSGNYLTVNPAYCNIYGYTQQEMLHRSFTMVFPPEAQGSVLE 69 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA- 229 R+ R F G E + G L ++ + +G L+ DI+E ++ Sbjct: 70 RHQR-FLDEGGKLGGEWTVTRRDGTLLTVWSESVPFAQAGHKADRLVYVL-DISERKKTH 127 Query: 230 -QERLRILANTDS 241 Q+++ A D+ Sbjct: 128 EQQQIA-AAVYDA 139 >UniRef50_Q2W7U0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W7U0_MAGSA Length = 831 Score = 775 bits (2002), Expect = 0.0, Method: Composition-based stats. Identities = 171/567 (30%), Positives = 281/567 (49%), Gaps = 6/567 (1%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 LS + V A + D+ I N TG + IG Sbjct: 18 QRRVEELSQQVERLSLYQAVFDNAFEGMFATDAANRIIAVNPAFTAITGYAAEEAIGNDP 77 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 L + A + + ++ E+ G+ + L+ + G+ Sbjct: 78 RMLSSGFHDPA-FYQEMWDQLSTTGQWQGEVVDRHKDGRPVRLWLSITSQRGADGKVARR 136 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDL 274 I D+TE R E+L +N D +T LPNRN D + A+ A + +KV ++++ L Sbjct: 137 IAVFRDVTEARETAEQLWQRSNFDPLTELPNRNLFLDRLLQALVLAGREGSKVAMLFIGL 196 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAM 333 D FK +ND+ GH GD++L++ + +CL AR GGDEF V+ S + + +EA+ Sbjct: 197 DGFKNINDSLGHWIGDKVLQEAARRFQNCLRQGDTAARFGGDEFTVVLSGVRATAEVEAV 256 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 +L L+ PF + + SCS+G+ + P G D +++R+A A+ AK+ GR F Sbjct: 257 IRSVLEVLQEPFVVEHHHILISCSIGVCMWPGDGEDVDSLMRNATAALQQAKQAGRNTFR 316 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGL 452 FTP M+ R L L AL + + +QP + G+V + EAL+RW + G+ Sbjct: 317 FFTPAMDARAQARSRLADELSGALSQGEFHLVFQPLVDVKSGKVNAAEALLRWHNRYLGV 376 Query: 453 IPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFT 511 + P F+ AEE GLI P+G W++ R+ W+ G+ + +AVNIS RQ I Sbjct: 377 VSPDQFVPLAEEIGLIRPIGEWLLTAACREALVWQGMGLGEINIAVNISPRQFQQGDIVG 436 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 +++ L++ + +E+TE L+ N E L+ ++ LG + +DDFGTGYSSLS Sbjct: 437 IIRRALEDTRLPPWLLTIEITEGLLLSNGEEILAKMEAIRTLGVSLSVDDFGTGYSSLSY 496 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L FP+D +K+D+ F+ D+ ++V AI+A+ +L+L+V+AEGVE+ ++ F+T Sbjct: 497 LKSFPVDVLKIDRSFIADMGDHSDDATMVEAIIALGHSLHLEVVAEGVETKQQLDFITAQ 556 Query: 632 GINERQGFLFAKPMPAVAFERWYKRYL 658 G + QG+ F+ P+ F + L Sbjct: 557 GCDVAQGYYFSPPLSGPRFREFVLERL 583 >UniRef50_Q74A79 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74A79_GEOSL Length = 873 Score = 775 bits (2002), Expect = 0.0, Method: Composition-based stats. Identities = 197/565 (34%), Positives = 303/565 (53%), Gaps = 14/565 (2%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS-RGNIQRFNRLCEDYTGLKEHDVIGQ 154 W + VV + AI++L+ G I N G +++ G Sbjct: 303 WRRLLESLQQGRRSEERNRLVVERTNQAILLLEPGAGTIIDANPATCVLLGFSRNELTGA 362 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 + L + S R EL + G L + ++ Sbjct: 363 DIHALLSGPVQEVDS--ELERCLRETR----ELSLCHRDGAELVVE--AMATQVPHGDDQ 414 Query: 215 FLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYL 272 L DIT+ RR QE L A D++TGLPNR+ ++D ++ A+ A V ++ Sbjct: 415 ALCLMFHDITDRRRFQEELLHQATHDTLTGLPNRSLLEDRLNQAVAGARRRGQMVALLMF 474 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALE 331 DLDNFK VND GH GDQLLR V+ I S + + AR GGDEF+++ +N ++ Sbjct: 475 DLDNFKVVNDTLGHTAGDQLLRSVAARIRSFVRNCDTFARLGGDEFVIVLTNLTRMDDAV 534 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A L +PF +G E++ + S+GI+L P+ G A+I+ ADTAMY KE GR Sbjct: 535 TVAESFRNLLAMPFFLGGREIFITASMGISLFPDDGDTMEALIKKADTAMYHIKESGRNS 594 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPER 450 F F EMNQ+V L ++T LR+ALE ++++HYQP++ G V +EALVRW SP+ Sbjct: 595 FQFFAEEMNQKVNARLTIETGLRRALEKGEMLLHYQPRLEPGTGAVVGMEALVRWNSPDM 654 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTI 509 GLI P DFI AE+SGLIV +G WV+ Q +W G + LRV+VNISARQ Sbjct: 655 GLISPADFIPIAEDSGLIVEIGDWVLATACCQALEWHRMGHDSLRVSVNISARQFVGHDF 714 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 + +++++ +++ELTE+ L N + + ++ + + G + +DDFGTGYSSL Sbjct: 715 VDRVVRIIEQSGLSPHFVELELTETALTHNVDETVKIMNRLRERGITISIDDFGTGYSSL 774 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 + L RFP+D +K+D+ F+ D+ K+ ++V I+ +A ++++V+AEGVE+A++ L Sbjct: 775 NYLKRFPVDVLKIDKSFIDDMVKRREDAAIVATIIGIAHHMHMKVVAEGVETAEQMKLLM 834 Query: 630 KNGINERQGFLFAKPMPAVAFERWY 654 + E QGF F++P+P FER+ Sbjct: 835 EGNCEEIQGFYFSRPLPPEEFERYI 859 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 774 bits (2000), Expect = 0.0, Method: Composition-based stats. Identities = 187/575 (32%), Positives = 289/575 (50%), Gaps = 15/575 (2%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 + +A +A + + + ++ +A AI++ I+ +N+ E G Sbjct: 474 QIFASRVAAELERQSADAHIRRQ----ASLLDKAQDAIMVRGLDDAIRYWNKGAERLYGW 529 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 K +V G+S L + A R N R + + + E+ G L + + + Sbjct: 530 KADEVTGRSTEMLLYG--DPTAFRENTRKVI-AHSEWNGEITQLRKDGTALVVEAHWTLL 586 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK 266 ++ T++TE + A+ ++ LA D +TGLPNR + D + HA+ Sbjct: 587 RDENDQPDAILAINTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGDRLQHAMQVRHGQV 646 Query: 267 VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS 326 ++ +DLDNFK +ND GH GD LL+ ++ + +CL LAR GGDEF+++ S Sbjct: 647 GALLLIDLDNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARVGGDEFVIVLEGLS 706 Query: 327 QSA------LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 S + +IL PF++ + + S+GI L + + + + AD A Sbjct: 707 ASPGDAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRPTTLDELRKRADLA 766 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLE 440 MY AK GR F P M V L+ +LR+AL +HYQ ++ RG V E Sbjct: 767 MYQAKAHGRNALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQAQVDARGCVSGAE 826 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVN 498 AL+RWQ P+RG I P FI AEE+GLI+PLG WV+ Q+ W L +AVN Sbjct: 827 ALLRWQHPQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWSKMPHMARLSLAVN 886 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 +SARQ + ++ + + +ELTES +++N + + + G Sbjct: 887 VSARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTILKMSALKAHGIGFS 946 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 LDDFGTGYSSL+ L R P+D IK+DQ FVRD+ S+ R+I+A+ Q+LNL+V+AEG Sbjct: 947 LDDFGTGYSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILALGQSLNLEVVAEG 1006 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 VE+ + AFL ++G QG+LF +P PA FE W Sbjct: 1007 VETDAQHAFLAEHGCQAYQGYLFNRPQPARQFEAW 1041 Score = 95.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 55/164 (33%), Gaps = 20/164 (12%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRG------NIQRFNRLCEDYTGLKEHDVIGQSVFK 158 + L+ E V+ + ++I ++ I N E TG + +V+G+SV Sbjct: 21 EAHQQLALLETSVARLNDIVLITEADHGGAAGPAIVFVNDAFEHITGYRRDEVLGKSVRL 80 Query: 159 LFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLIC 218 L + A RR + EL + G+ +L + + + + Sbjct: 81 LHGPLTDRAEVRRIGEA-LENQRPVRSELVNYSKHGEPFWLELDVVPVTDANGYYTHCVA 139 Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA 262 D+T + A L L NR + A N A Sbjct: 140 VERDVTRRKEADLELARL----------NRAL---RVRSACNKA 170 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 774 bits (1999), Expect = 0.0, Method: Composition-based stats. Identities = 180/597 (30%), Positives = 293/597 (49%), Gaps = 23/597 (3%) Query: 83 KINKREWAGNASAWHDTPAVA--------RDLSH------GLSFAEQVVSEAHSAIVILD 128 + R+ + AW A RD+S GL A V + I+I D Sbjct: 199 RYRHRDGSYRVIAWSAATAERESVICAVGRDISQEHAARRGLFQAAAVFKNSGEGILISD 258 Query: 129 SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW 188 G I+ N TG D IGQ L R + + R G + E+W Sbjct: 259 KDGRIRDVNAAFSRITGYSREDAIGQPTSLLRSGRHDGDFYADMWQTLQRDG-VWRGEIW 317 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 G G + TDI++ + +E+L+ LA+ D +T LPNR Sbjct: 318 NRRKSGTVFPELLTISKIDGPDG---GFMAIFTDISQLKETEEQLQKLAHYDPLTNLPNR 374 Query: 249 NAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 + + ++H+I A + V +LD+D+FK +ND+ GH GD+LL+ + + + L Sbjct: 375 FLVNECLEHSIRRAQRRSDHLAVFFLDIDSFKNINDSLGHFAGDKLLKTTANRLKALLRD 434 Query: 307 DQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPE 365 D + R GGDEFL++ + S +A +I+ LR P + + S S+GI++ PE Sbjct: 435 DDSVGRIGGDEFLMVLDDISTPDDATHIAEKIIGALRKPMILEGRSISVSASIGISIYPE 494 Query: 366 HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIH 425 G + ++ +AD AMY AK+ GR F ++ + ++ F+ + +D+ LR+A+ + + Sbjct: 495 DGQTAETLMSNADAAMYNAKDQGRDTFRFYSEHLTRQAFQNVLIDSALREAVSRQEFRLA 554 Query: 426 YQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 +QP++ G + LE L+RW G + P FI AE +GLI +G WV+ Q + Sbjct: 555 FQPQVNTDNGSLLGLEVLLRWHHLTLGTVSPSQFIPQAERTGLIRDIGHWVLEQSCLQGS 614 Query: 485 KWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 +W +G+ +AVN+SA Q + +++VL + F +++ELTES L+ + E Sbjct: 615 RWIAEGLQFGHLAVNVSAPQFRAEDFVAQVRKVLADTEFPPEKLELELTESVLVHDTEKL 674 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 + + + LG +DDFGTGYSSLS L R PID +KLD+ FV I + + A+ Sbjct: 675 IENMHELRALGVMFAIDDFGTGYSSLSYLKRMPIDRLKLDKSFVDHIVSDDSDRIIAGAV 734 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 +A+ +A+ L VIAEG+E + L G QG+L+ +PM E + +L++ Sbjct: 735 LALGKAMGLPVIAEGIEQEAQARVLQSLGCKHFQGYLYGRPMYGPRIEVVLRAHLEK 791 Score = 44.1 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 11/160 (6%) Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQ---VVSEAHSAI-VILDSRGNIQRFN 137 R I + + +AS H V D++ S AEQ + + + ++ G I+ N Sbjct: 92 RAIGRSYASPDASVTHA-AGVLLDVTTQRS-AEQYYDAFFQQPNGMHLVASIDGEIRLTN 149 Query: 138 RLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRL 197 + G + ++ GQ++ L + A+ + E G Sbjct: 150 SAWQLVLGHGDAELQGQNLLDLVHPE-DREATLAEMGKLSQGMYTLYFENRYRHRDGS-- 206 Query: 198 FLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 +R + + + E + G DI++E A+ L A Sbjct: 207 --YRVIAWSAATAERESVICAVGRDISQEHAARRGLFQAA 244 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 772 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 180/598 (30%), Positives = 301/598 (50%), Gaps = 7/598 (1%) Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 +M L E L++ + + D + + L V + I Sbjct: 127 VMPLQGTERYLAIDAGPVRDSSGRIIAVVETLRDRTS-HKLAELRLRQMASVFEHSQEGI 185 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 +I D I N TG + +G++ L ++AA R R +G + Sbjct: 186 MITDPATRILDVNASFVRVTGYSREEALGRTPTLLKSGLQDAAFYRALWRDLNETGR-WH 244 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ + I DIT+ + +Q RL LA+ D +TG Sbjct: 245 GEIWNRKKSGELYPEILHINAVQDPSGRVTHYIGMFIDITDLKNSQSRLENLAHYDVLTG 304 Query: 245 LPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR + + A++ A ++ V +LDLDNFK VND +GH GD+LL D+ + Sbjct: 305 LPNRLLLGYRLRQALDDAQRHERLAAVCFLDLDNFKLVNDHHGHETGDRLLIDIGRRLRD 364 Query: 303 CLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 L + +AR GGDEF++L ++ +Q L+ + R+L + P RI +++ + SVG+ Sbjct: 365 TLRSNDTVARLGGDEFVILLNDLRNQEELDNVLVRLLDGVAHPVRIDALQIVITVSVGVT 424 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 + P D ++RHAD AMY AK+ GR ++ +F PE + +R+AL++ + Sbjct: 425 IYPLDDHDPDTLLRHADQAMYQAKQMGRNRYQLFDPEAANAMQSRHRELERIRQALQHGE 484 Query: 422 LVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 ++YQPK+ R G+V +EAL+RW+ PERGL+PPL F+ E S LIV +G WV+ + + Sbjct: 485 FQLYYQPKVDMRLGQVVGMEALIRWRHPERGLVPPLQFLPLIEASPLIVEVGEWVLHEAL 544 Query: 481 RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQEL-NFEYCPIDVELTESCLIEN 539 Q+ +W +G L ++VNI+A + L+ +L E +++E+ ES +E+ Sbjct: 545 GQIRQWCAEGRPLTISVNIAAHHFQQRDFVLRLQTILAEHPEATPRLLELEILESAALED 604 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 + ++ +G + LDDFGTGYSSLS L + P + +K+DQ FVR++ + ++ Sbjct: 605 IQSVRGIMTACQAMGVRFALDDFGTGYSSLSYLKQLPAETLKIDQSFVRNMLEDSEDLAI 664 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 + ++ +A+ +VIAEGVE+ ++ L + G + QG+ +PMPA W + Sbjct: 665 IEGVIGLAKVFRKEVIAEGVETPEQGLLLMRFGCDHAQGYGIGRPMPAEQIPAWMDEF 722 Score = 63.8 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 16/142 (11%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF-------------- 157 FA +++ + +LD+ G + +NR CE+ TG+ V+G Sbjct: 34 FAAELLEQLVVPTFVLDATGRVIVWNRACENLTGMPASRVLGSQDHWRAFYPECRPCLAD 93 Query: 158 -KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTC-KGQRLFLFRNKFVHSGSGKNEIF 215 L E R+G E W +G +L + S I Sbjct: 94 LVLHNRLDEIDHFYTEYDQLLRTGCEIHAENWCVMPLQGTERYLAIDAGPVRDSSGRIIA 153 Query: 216 LICSGTDITEERRAQERLRILA 237 ++ + D T + A+ RLR +A Sbjct: 154 VVETLRDRTSHKLAELRLRQMA 175 >UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CH18_SHEPW Length = 1073 Score = 772 bits (1994), Expect = 0.0, Method: Composition-based stats. Identities = 185/601 (30%), Positives = 309/601 (51%), Gaps = 8/601 (1%) Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 ++++ + D ++ L E ++A + + L A V + Sbjct: 456 TTIVNDVEEMAKDPNLQLNIEIKGNDELTQISTALNQMLSERMLARTSLQQASAVFEHSS 515 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 I++ ++ I+ N TG +V GQ L S + N Sbjct: 516 EGIMVTNADNRIELVNPAFTKITGYTLEEVKGQKPSVL-SSNHHQPEFYSQLWHSITTTN 574 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 +E E+W G + + + I D++ ++ ++ L +N DS Sbjct: 575 HWEGEIWNKRKDGNVYPEYLSITAVENAQGQISQYIGLFLDVSNHKQYEQDLWYKSNYDS 634 Query: 242 ITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +T LPNR+ + HAI+ A N++V V ++DLD FK +N+ +GH G+++L+ + Sbjct: 635 LTKLPNRHQFSSRLQHAIDGASQTNSQVAVFFIDLDRFKFINELHGHAAGNEILKQSATR 694 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSV 358 + S L + +AR GGDEF++++ + E +A +++ L P ++ IE S SV Sbjct: 695 LESVLGPEDSIARFGGDEFVIISPQHNAIETAEQLAHKLVDVLVQPLKLDAIESNISASV 754 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 GIA PE G D ++R+++TAMY AK GR F F+PEMN + E + L+ LRKA++ Sbjct: 755 GIAFYPEDGQDIEMLLRNSETAMYQAKRDGRAHFQYFSPEMNVEMLERMQLEQRLRKAVK 814 Query: 419 NDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 + + YQP + G V S+EAL+RW+ PE G+I P FI AEE+GLI PLG WV+ Sbjct: 815 KSEFYLEYQPVVDMTHGTVSSVEALIRWRDPEFGIISPALFIPIAEETGLIEPLGEWVLN 874 Query: 478 DVVRQVAKWRDKGINLRVAVNISARQLADQT---IFTALKQVLQELNFEYCPIDVELTES 534 + ++ W +G L++A+N+S RQ + + L++ L + +E+TES Sbjct: 875 QALADLSSWHAQGHMLKIAINVSGRQCINSNGLSFYQVLEEALLRHKIAAHYVHIEITES 934 Query: 535 CLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQP 594 LIE+ +L ++Q LG ++LDDFGTGYS+LS L +FPI IK+D+ F+ + Sbjct: 935 LLIEDKPYSLEILQSIRNLGVDIYLDDFGTGYSALSYLNQFPISVIKIDKSFIDNATVSQ 994 Query: 595 VSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 LV+AIV + Q+L + ++AEG+E+ ++ FL G N QG+L +KP+ + + Sbjct: 995 SDAKLVKAIVMMGQSLEMTLVAEGIETEEQWDFLQSLGCNYAQGYLMSKPLSSENLLTFL 1054 Query: 655 K 655 + Sbjct: 1055 E 1055 >UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IP89_XANP2 Length = 758 Score = 770 bits (1991), Expect = 0.0, Method: Composition-based stats. Identities = 189/643 (29%), Positives = 317/643 (49%), Gaps = 19/643 (2%) Query: 25 ESSDVLRFSTTETTEPDRTLQL------SAEQAARIREMTVITSSLMMSLTVDE-----S 73 + D+L + + RT + + AA +++ S + + + + Sbjct: 102 RARDILGIAPKAPVDIRRTFRQMLRGADRRKVAAVRKDLVRGGSDVDLDIRISRPDGASR 161 Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 D+ + + D A + L A V + AH +V+ D + Sbjct: 162 DVRWRGLATRDGDGAVTRVVGMITDVTA-QKQSERHLRLAAAVFASAHDGLVVTDLNAVV 220 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 N TG E +++G+S+ + R + R S ++ E+W Sbjct: 221 SAVNPAFSQITGYCEAEILGRSMRTMHSGRHDRE-FYRGMWGALTSTGSWHGEIWNRRKN 279 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G+ + + + DIT + ++ L +A+ D +T LPNR + Sbjct: 280 GEIFLQQLSIRTVFDEKGKPQNYVGAFQDITRIKHSEFELDRIAHYDPLTDLPNRTLLAS 339 Query: 254 LIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 L+D A++ A V++LD+D FK VND+ GH+ GD +L+ + I + L+ D L Sbjct: 340 LLDLAVSRA-GKTCAVLFLDIDRFKTVNDSLGHIAGDAVLKAAADRIRAALDADATLGHY 398 Query: 314 GGDEFLVLASNTSQSALEAMAS-RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTA 372 G DEF+V+ A+A+ R++ L PF I E+Y SVGI+L P D+ Sbjct: 399 GADEFVVILEEIEGPQDAALAASRLIDELARPFTINGGEIYLGASVGISLHPLDADDAAQ 458 Query: 373 IIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW 432 +++HA+TA+ AK GRG + +T + + + ++ +LR+ L ++ +++QP + Sbjct: 459 LLQHANTALAEAKAQGRGIYSFYTQALTRSARVRMEMEADLRRGLVREEFRLNFQPVVDL 518 Query: 433 -RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI 491 G + EALVRWQSP GL+ P FI AEE+GLI PLG WV+ + +Q+AKW G Sbjct: 519 ANGRIAGAEALVRWQSPVHGLVLPNRFIPLAEETGLIEPLGDWVLEEACQQMAKWTAAGA 578 Query: 492 NLR-VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQF 550 +L +AVN+S RQ T+ +++VL+ ++VE+TE+ L A ++ Sbjct: 579 DLDFIAVNLSPRQFQRGTLCERIEEVLRRTGLPAARLEVEITENVLFGAV-AAERKLRDM 637 Query: 551 SQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQAL 610 G ++ LDDFGTGYSSL+ L RFPI +K+D+ FV D+ + + AI+++A+AL Sbjct: 638 RDSGVRIALDDFGTGYSSLAYLKRFPISKLKIDRSFVHDLPR-AADAEIATAIISIARAL 696 Query: 611 NLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 L V+AEG+E+ ++ AFL + G QG+LF +P+ + F R Sbjct: 697 GLDVVAEGIEAPEQCAFLKERGCGFGQGYLFGRPVTSERFLRL 739 >UniRef50_A3Y9K4 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9K4_9GAMM Length = 938 Score = 770 bits (1990), Expect = 0.0, Method: Composition-based stats. Identities = 174/607 (28%), Positives = 312/607 (51%), Gaps = 17/607 (2%) Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVAR-----DLSHGLSFAEQVVSE 119 M L ++ S LS + W A + T + + L + +V Sbjct: 319 MQHLLIEFSLLSCLSLIITFGVALWLRKAFMSYHTHSQKQHELLLQNKTELELSARVFDS 378 Query: 120 AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRS 179 I+I D I N TG + ++IG + F S + + Sbjct: 379 TSEGIMITDEFNQIITCNSSFCRITGYSKEEIIGLTPNT-FASGLTDPDIYSDMWHALTT 437 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANT 239 ++ E+ +G + + V+ I I + DI++ ++A+ L+ LA+ Sbjct: 438 KGLWQGEVINQHKQGHLFPEWLSINVYKDKQGKAINYIGTIVDISKRKQAENTLQHLADY 497 Query: 240 DSITGLPNRNAMQDLIDHAINHADN-------NKVGVVYLDLDNFKKVNDAYGHLFGDQL 292 DS+T LPNR ++ +DH I NK +++LDLD FK +ND+ GH GD++ Sbjct: 498 DSLTDLPNRRFFKEQVDHIIEIDKQRKPTEPINKFALLFLDLDYFKFINDSLGHSAGDKV 557 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIE 351 L+ ++ +L + + +++R GGDEF+++ + S+ A++ ++ + P I Sbjct: 558 LKIIASRLLEHKDKNTIISRLGGDEFVIVLQDIASEKAVKQFCFELMQNIEKPMNILGRS 617 Query: 352 VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDT 411 + + S+G L P+ G+ + ++++AD A+Y AKE GR FT +N+ + L L+ Sbjct: 618 LIVTPSIGATLYPKDGNRTNILLKNADAALYRAKENGRNNVQFFTANLNRDALKRLSLEN 677 Query: 412 NLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 +LR+AL +Q I+YQP++ +V EAL+RW P +G + P++FI AEE+G+I Sbjct: 678 DLRRALNRNQFEIYYQPQVNLNTKQVIGCEALIRWHHPTKGFVSPIEFIPIAEETGIINE 737 Query: 471 LGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDV 529 +G W++ + +Q A W ++ G + +A+N+SARQ D T+ + + + L + + + Sbjct: 738 IGEWILFEACQQAANWCNEYGREIDIAINLSARQF-DDTLVSTVLKALNQSQLPSHCLTL 796 Query: 530 ELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRD 589 E+TES L+++ E + + Q Q +V LDDFGTG+SSLS L RFP+D +K+D+ FV+D Sbjct: 797 EITESILVQDPEQVIHTLTQLRQSSIKVALDDFGTGFSSLSYLKRFPLDKLKIDRAFVKD 856 Query: 590 IHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVA 649 + +++ +++AVA+ L IAEG+E+ ++A L + QG+ + KP+ A A Sbjct: 857 LPNNTDDGAIIASVLAVAKHFQLTTIAEGIENTDQEALLEALNCTQGQGYFYDKPLTAYA 916 Query: 650 FERWYKR 656 + + Sbjct: 917 MAQRLRH 923 >UniRef50_Q3SJL3 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) and Response Regulator Receiver modulation n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJL3_THIDA Length = 836 Score = 770 bits (1989), Expect = 0.0, Method: Composition-based stats. Identities = 194/578 (33%), Positives = 320/578 (55%), Gaps = 10/578 (1%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 R AG S D RD E ++ + I++ G ++ NR GL Sbjct: 245 RGIAGFVSTGRDVTDRIRDEQTRGQLLE-ILEATTDFVAIIEGDGRLRYLNRAGRAVLGL 303 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVF--FRSGNAYEVELWIPTCKGQRLFLFRNKF 204 + + S + E A R F R A++ E+ G+ + + + Sbjct: 304 TATEDV--SSRHIAQCHPEWATHRLLMEAFPTARRDGAWQGEIAARLADGREIPVSQVVL 361 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH-AD 263 H G+ + F DITE + ++ LR A D++TGLPNR ++D I+ + H A Sbjct: 362 AHGGANEMPEFFSTIARDITERKHFEQELRRQATHDALTGLPNRILLEDQIEAVVAHSAR 421 Query: 264 NNKVG-VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 ++K+ V++LD+DNFK++N++ GH GD +LR + + C+ V+AR GGDEF ++ Sbjct: 422 SHKLASVLFLDIDNFKRINESLGHAAGDAMLRHAAQRLRDCVRPTDVVARYGGDEFTIVL 481 Query: 323 SNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 + S + A+ ++ P I EVY S SVG+++ P G D ++++ADTAM Sbjct: 482 GDLSHVDNIPAILHKVRAAFETPLVISGQEVYASFSVGVSVYPHDGDDGATLLKNADTAM 541 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLE 440 Y +K GR ++ + PEMN R E L L+T+LR+AL+ + +HYQP++ R + +E Sbjct: 542 YRSKASGRNRYQFYAPEMNARGQELLSLETDLRRALDRGEFRLHYQPQLDLRDNRIAGVE 601 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNI 499 AL+RW+ P G+I P DF+ E++GLIVP+G WV+ + Q R+ G+ +R++VN+ Sbjct: 602 ALLRWKHPRDGVIAPGDFVPLLEDTGLIVPVGEWVLRNACTQYRACRESGVAPVRISVNV 661 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 SARQ + T+ ++QVL+E +++E+TES +++ ++ LG ++ + Sbjct: 662 SARQFREDTLLRQVEQVLREECMPPHHLELEITESTAMQDVAATGDILAALDALGVRLAI 721 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSL+ L RFP+DA+K+DQ F+RD + ++ A +++ L L+V+AEGV Sbjct: 722 DDFGTGYSSLAYLKRFPLDALKIDQAFIRDAPRDANIAAIAEASISLGHKLGLEVVAEGV 781 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 E+A++ AFL + + QGF F++P+PA A + R+ Sbjct: 782 ETAEQLAFLRRRACDLIQGFHFSRPLPADALTPFLARH 819 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 1/127 (0%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 H + Q V +A ++ I D +G IQ N E TG + IG++ + R Sbjct: 140 QTEHLVRRLSQAVEQAADSVFITDRQGTIQYVNPSFERLTGYSAAEAIGRTPALIKSDRH 199 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 + A + +G ++ L G + + G+ + +G D+T Sbjct: 200 DDAFFHKLWDTIL-AGRIFQETLVNRRKDGGLFYEEKTIAPLFDEGRGIAGFVSTGRDVT 258 Query: 225 EERRAQE 231 + R ++ Sbjct: 259 DRIRDEQ 265 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 769 bits (1987), Expect = 0.0, Method: Composition-based stats. Identities = 180/612 (29%), Positives = 311/612 (50%), Gaps = 6/612 (0%) Query: 54 IREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA 113 I E I + ++ D S+++V+ IN + + + Sbjct: 523 INEGVPILAEELLLQRADGSNVAVYSSHTLINNTDNEAEMYCIDIDLSAQKKAEEQALTL 582 Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN 173 Q + ++ ++++ + I+ N E +G +VIGQS L S + + Sbjct: 583 SQAIEQSPISMILTNIDSKIEYVNSAFEKISGYAASEVIGQSASML-KSGLTPKSLYKQL 641 Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 +G+A++ EL G + + + + D+T+ ++ +E++ Sbjct: 642 WDAISTGHAWQGELQNRKKNGDIFWEHAHIAPIFDNAGVTKHYLALKQDVTQYKQQEEKI 701 Query: 234 RILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQ 291 A+ DS+TGLPNR D + + A N V V++LDLD+FKKVND GH GD+ Sbjct: 702 LHQAHYDSLTGLPNRLLSLDRLSQMLKDAHRAKNNVAVLFLDLDDFKKVNDTMGHSVGDE 761 Query: 292 LLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLI 350 LL ++ + + + V+ R GGDEF+++ SN ++ +E +AS++L + PFR+ Sbjct: 762 LLIQAAVRLKNTIRESDVVGRLGGDEFIIILSNINEPIEVEIIASKLLEQFYQPFRLENR 821 Query: 351 EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLD 410 E+ ++ S+GIAL P D ++R AD+AMY +K+ GR + +T +MN + L ++ Sbjct: 822 ELVSTISIGIALYPLDSEDPKELLRQADSAMYHSKDRGRNTYNFYTHQMNHDMDRRLKIE 881 Query: 411 TNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIV 469 LR AL+ + +++QP + + + EAL+RW + G + P +FI AE++GLIV Sbjct: 882 EQLRSALKQKEFEVYFQPFVDIKSRKIIGAEALLRWNNALLGQVTPDEFIPIAEQTGLIV 941 Query: 470 PLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPID 528 +G++VI KW+ ++A+N+S +Q + T L L + I+ Sbjct: 942 SIGQYVIEVAFATAKKWQQTYNPYFKIAINVSPKQFRENTFVDMLNIQLDKHQIHASTIE 1001 Query: 529 VELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVR 588 +E+TE L+ +D + S + + +G + +DDFGTGYSSLS L +P + +K+D+ F+ Sbjct: 1002 LEITEGVLLSSDAVIDSNLISINDIGVSISMDDFGTGYSSLSYLRSYPFNTLKVDKSFIN 1061 Query: 589 DIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAV 648 DI P LV A +A+ LNL V+AEGVE+ ++ L + QG+LF+KP+P Sbjct: 1062 DITVDPGDLELVGAAIAMGHGLNLTVVAEGVETEEQYHLLNALKCDYGQGYLFSKPLPQA 1121 Query: 649 AFERWYKRYLKR 660 AFE + K Sbjct: 1122 AFEALLLKQAKN 1133 Score = 79.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 1/130 (0%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 L + + ++ I + G N+ + L D+ ++ + LF R++ Sbjct: 203 LETEKNLLQSIIDGIPDIIFYKSADGVYLGCNKAFSEALKLNPEDIKHKTDYDLF-DRQQ 261 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 A + + +R + + E WI T G +K S + ++ D+ + Sbjct: 262 ADSFIKADRFVLQENQPWMDEEWITTPDGIAHIFKTHKTPFVDSSGDIQGIVGVSRDMAD 321 Query: 226 ERRAQERLRI 235 + +E+LR Sbjct: 322 RKLIEEQLRR 331 Score = 70.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 32/248 (12%), Positives = 77/248 (31%), Gaps = 35/248 (14%) Query: 24 TESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRK 83 + D L E Q S + +++ I T +L + Sbjct: 368 GYTLDELFNKPIGDIETSENHQFSTQNIITAKQVKAI------HYTSQHKHKLGYLFHVE 421 Query: 84 INKREWAGNASAW---HDTPAVARDLSHGLSFAEQ----VVSEAHS-AIVILDSRGNIQR 135 +N W G+ + + + L +E + S ++ D ++ Sbjct: 422 VNISFWDGDDGMFFCFIKDISQRINAEQKLLLSESKFRHIFENIPSISVQGYDKNRSVIF 481 Query: 136 FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA-YEVELWIPTCKG 194 +N+ E G + +G+ + L + N + G EL + G Sbjct: 482 WNQASEKLYGYTKEQALGKKLEDLIIPPPYREHVINNVNAWINEGVPILAEELLLQRADG 541 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDL 254 + ++ + + + + C D++ +++A+E+ ++T Sbjct: 542 SNVAVYSSHTLINNTDNEAEMY-CIDIDLSAQKKAEEQ--------ALT----------- 581 Query: 255 IDHAINHA 262 + AI + Sbjct: 582 LSQAIEQS 589 Score = 69.1 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 5/145 (3%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 G + D + L S ++S A VI+ G I N+ D TG Sbjct: 312 IVGVSRDMADRKLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGYTL 371 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 ++ + + + S N + + A G + N G Sbjct: 372 DELFNKPIGDIETSENH--QFSTQNIITAKQVKAIHYTSQHKHKLGYLFHVEVNISFWDG 429 Query: 209 SGKNEIFLICSGTDITEERRAQERL 233 C DI++ A+++L Sbjct: 430 DDGM---FFCFIKDISQRINAEQKL 451 >UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V294_9PROT Length = 1157 Score = 769 bits (1987), Expect = 0.0, Method: Composition-based stats. Identities = 175/559 (31%), Positives = 281/559 (50%), Gaps = 20/559 (3%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 L + A + + D+ G IQR N TG +VIGQ+ +L S + A Sbjct: 593 LRVSATAFD-AQEGMFVTDAEGVIQRVNNAFTQLTGYSASEVIGQTP-RLLSSGQHDAVF 650 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 + E+W G+ + + + DI++ + A Sbjct: 651 YALMWQSINETGKWAGEIWNRRKNGEIYPEYLAITAVKDESGVVNNYVATFNDISDSKAA 710 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDH------AINHADNNKVGVVYLDLDNFKKVNDA 283 +++LA D++TG + L+ A + N ++ +DLDNFK +N+ Sbjct: 711 TNEIQLLAFYDALTG----LPNRRLLLDRLLQALASSVRSNRMGALLLIDLDNFKTLNET 766 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM------ASRI 337 GH GD LLR V+ + +C+ + +AR GGDEF+V+ ++++ A +I Sbjct: 767 MGHDIGDLLLRQVAERLTACVRNGDTVARLGGDEFIVMLEEIGAQTVDSVTHTTTIAEKI 826 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L L LP+R+ E +++ S+G L + +++ D AMY AK+ GR F Sbjct: 827 LNSLNLPYRLEKHECHSTPSIGATLFSGTQQSADELMKQVDIAMYQAKQAGRNGLRFFDS 886 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLD 457 +M + L+ +LR AL N + +HYQ ++ G E L+RW P+RG++ P Sbjct: 887 KMQDAISARASLEADLRVALINSEFQLHYQIQVNSLGAALGAEVLIRWMHPQRGMVSPAQ 946 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQ 515 FI AEESGLI+P+G WV+ Q+ W+D + L +AVN+S++Q +K+ Sbjct: 947 FIPLAEESGLILPVGEWVLKTACHQLKVWQDNALTRELTLAVNVSSKQFRQAEFVELVKK 1006 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 LQ + +ELTES L+EN + ++ + + +G +DDFGTGYSSL + R Sbjct: 1007 TLQSSGANPSLLKLELTESLLLENIDEIIAKMNELKLMGIHFSIDDFGTGYSSLQYIKRL 1066 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P+D +K+DQ FVRDI ++V+ I+A++ AL L VIAEGVE+ ++ AFL +G + Sbjct: 1067 PLDQLKIDQSFVRDIMDDNNDAAIVQTIIAMSDALGLNVIAEGVETREQRAFLDSHGCHT 1126 Query: 636 RQGFLFAKPMPAVAFERWY 654 QG+LF+KP+P FE Sbjct: 1127 FQGYLFSKPIPLEQFEILL 1145 >UniRef50_C6MIL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIL1_9PROT Length = 576 Score = 769 bits (1986), Expect = 0.0, Method: Composition-based stats. Identities = 211/568 (37%), Positives = 335/568 (58%), Gaps = 12/568 (2%) Query: 96 WHDTPAVARDLSHGLSFA-----EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 +H R L++ L F+ ++++ AI I D+ + N+ CE GL D Sbjct: 5 FHVNDESIRMLTNYLFFSDVSKFQELIDLLPIAIFIKDTESKLLAINKACELQWGLSFKD 64 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNA-YEVELWIPTCKGQRLFLFRNKFVHSGS 209 + G ++F + ++ VF +E +W K R+ K + S Sbjct: 65 LQGTDASQIFPPAQMEHFLAKDQEVFESGCQIDFEETMWNSMLKQNRMVHTFKKPICDTS 124 Query: 210 GKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH--ADNNKV 267 GK ++LI DITE RA++R+ +A D +TGLPNR ++D I+ A+ H + +V Sbjct: 125 GK-PLYLIGMFVDITERHRAEQRILEMATYDILTGLPNRALLKDRIERALEHGNRNRQRV 183 Query: 268 GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ 327 ++++DLDNFK +ND+ GH GD+LL+ V+ +S + + +AR GGDEF+VL SN Sbjct: 184 ALLFIDLDNFKVINDSLGHDVGDKLLQAVAARFVSIVRGEDTVARQGGDEFIVLLSNLES 243 Query: 328 S-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKE 386 + EA+A +IL L+L F I E++ S S+GI+L P+ G D ++R++D AMY AK+ Sbjct: 244 AFDAEAVAQKILNALQLHFLIDGKELHISGSIGISLFPDDGEDIWTLLRNSDIAMYHAKK 303 Query: 387 GGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRW 445 GR F PEMN++ E ++ LR AL+ D+L++HYQP + G + E L+RW Sbjct: 304 NGRNNCEFFKPEMNRQAKERHSMEVALRNALKRDELLLHYQPIVNVNGGKADGFEVLLRW 363 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQL 504 Q P GLI P+ FI AEE+G+I+P+G W++ Q+ W+++G + R+A+N+SA Q Sbjct: 364 QHPGDGLIYPVKFIRLAEETGMIIPIGEWLMRQSCLQIKAWQEQGYEVPRLAINLSAIQF 423 Query: 505 ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGT 564 +T+ + ++L E + +E+TES LIE+ E + ++Q S+LG ++ +DDFGT Sbjct: 424 RQKTLMENIVRILDETGVTGHYLTLEITESELIEDVEETIKTLRQLSELGIEISIDDFGT 483 Query: 565 GYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE 624 GYS+LS L R+ I+ +K+D+ FVRDI P +++ AI+ +A AL LQVIAEGVE+ ++ Sbjct: 484 GYSNLSFLKRYQINTLKIDRSFVRDIPDDPDDTAIIDAILVMAHALGLQVIAEGVENEQQ 543 Query: 625 DAFLTKNGINERQGFLFAKPMPAVAFER 652 A+L +G QGF F+KP+PA+ E+ Sbjct: 544 LAYLALHGCTRFQGFYFSKPLPAIEIEK 571 >UniRef50_Q5P713 Predicted phospholipase A2 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P713_AZOSE Length = 1043 Score = 768 bits (1985), Expect = 0.0, Method: Composition-based stats. Identities = 195/600 (32%), Positives = 319/600 (53%), Gaps = 17/600 (2%) Query: 69 TVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAE------QVVSEAHS 122 D + + R + A A VA + E +V+ + Sbjct: 443 LYDTNVQGFDVKMRDLITEMVADIGYALDRIDLVAEQARTSAALRESEVKYRKVLETSQD 502 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 +L+ + N +++G + +++G V +L S +A+ R+ GNA Sbjct: 503 GFWLLNRDWLLTEVNDAYIEFSGYRREELVGMHVTQLDAS--DASEMARHIASAVEDGNA 560 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 E T G+ + + +G + D++ AQE +R L++ D++ Sbjct: 561 -TFETRHRTKSGELKPVEVSVTFDAGRAACFSLFV---RDLSRRDEAQEHIRRLSHFDTL 616 Query: 243 TGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 TGLPN + DL+ AI +A + + V+Y+D+D+F+ +ND GH GD+LL +++ Sbjct: 617 TGLPNSSLFADLLRQAIGNAQRSGESLSVMYIDIDHFQHINDTLGHRIGDRLLVEIAGRF 676 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 + L + LAR GGDEFL+L + +A +++ P I E+ + S+GI Sbjct: 677 RNALCAENTLARLGGDEFLILLPHAQVECAAHVAEKLIVAAADPMLIEDHEMLVTPSIGI 736 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 A+ P G D +++ ADTA AK GR + F PEM R L L+T LR+ALE + Sbjct: 737 AMYPADGEDFETLLQRADTATNRAKSDGRNTYRFFAPEMQLRSAHTLRLETALRRALERN 796 Query: 421 QLVIHYQPKITWR--GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 +LV+HYQP+I G V +EAL+RWQ PE GL+ P +FI AE +GLI+P+G WV+ Sbjct: 797 ELVLHYQPQIDLVDFGRVAGVEALIRWQHPEFGLVSPAEFIPIAESTGLILPIGEWVMQT 856 Query: 479 VVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 + Q+ W+ G+ L +V VN+SA Q Q + + ++L E +++ELTES ++ Sbjct: 857 ALLQLKAWQLAGLQLGQVGVNLSAHQFRQQNLPATVARILAEAGLPASCLELELTESAMM 916 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 ++ A++++ + G ++ +DDFGTGYSSL+ L RF ID +K+DQ FVRD+ + P + Sbjct: 917 DDPVAAVAMMDALHRDGVRMSIDDFGTGYSSLNYLKRFRIDKLKIDQSFVRDLTQDPEGE 976 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 ++V AIV++A+ L + IAEGVE ++ AFL +G E QG+LF++P+P W + + Sbjct: 977 AIVEAIVSLARTLRFRTIAEGVEKPEQLAFLRASGCQEVQGYLFSRPLPPDELAVWLRAW 1036 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 766 bits (1980), Expect = 0.0, Method: Composition-based stats. Identities = 177/593 (29%), Positives = 300/593 (50%), Gaps = 20/593 (3%) Query: 79 LVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNR 138 +G+ E + L V+ ++ +IVI D+ G I N Sbjct: 330 RIGQATGVAELDALSEGIDQMALEIGKREGELQRLSMVIEQSPESIVITDTAGCILYVNE 389 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF 198 + TG +V+G++ L A+ +G + E G Sbjct: 390 AFQRITGYARDEVLGRNPRIL-NGGLTPRATYEQMWATLLAGEVWRGEFHNVRKDGSAYL 448 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 +G + DIT+ ++++ L LA D++TGLPNR + D I A Sbjct: 449 ELATIAPIKDAGGTVTHYVAVKEDITQRKQSEALLHRLAYFDALTGLPNRALLHDRIAQA 508 Query: 259 INHA-DNNKVG-VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGD 316 I G ++ +D+D F+++ND GH GD+LL +V+ + + + + +AR G D Sbjct: 509 IRSGVRRESFGMLMLVDIDRFRQLNDTLGHAAGDRLLCEVAARLRASVREEDTVARHGDD 568 Query: 317 EFLVLASNTSQSAL------EAMASRILTRLRLPFRIGLIE---VYTSCSVGIALSPEHG 367 +F VL ++ E +A ++ L+ P+ +G E + + S GI+L G Sbjct: 569 DFAVLVERIGETEADALSHAEHVARKLQRALQQPYVLGGTEGDRHFATLSFGISLF-HDG 627 Query: 368 SDS-TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHY 426 S ++++ A+ A+Y AK+ GR F PEM V + L+ + +ALE + + + Sbjct: 628 VSSLESLLKQAEVALYRAKQDGRDIVRFFNPEMQAVVDAHARLEARMHEALEANAFRLFF 687 Query: 427 QPKITWRGEVRSLEALVRWQSPERG--LIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 QP++ RG V EAL+RW P G ++ P +FI AE++G IV LG WV+ Q+A Sbjct: 688 QPQVNRRGVVIGAEALLRW--PLDGGAMVSPAEFIPLAEDTGHIVRLGLWVLRSACAQLA 745 Query: 485 KWR--DKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDEL 542 +W+ + +L++AVN+SARQ ++K ++ + C +++ELTES ++ + + Sbjct: 746 RWQMNEGTRHLKIAVNVSARQFHQPDFVASVKDSVRAAAIDPCRLELELTESAILSDVDE 805 Query: 543 ALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRA 602 + + + LG + LDDFGTGYSSLS L R P D +K+DQ FVRD+ + S+++V A Sbjct: 806 TIRRMNELRALGIRFALDDFGTGYSSLSYLKRLPFDQLKIDQSFVRDMAEDESSEAIVLA 865 Query: 603 IVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 I++++ AL L+V+AEGVE ++ FL ++G + QG+LF KP+P A+ + + Sbjct: 866 ILSLSHALGLEVVAEGVEMPEQRDFLRQHGCDSFQGYLFGKPLPMEAWGDFLE 918 >UniRef50_Q609J7 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q609J7_METCA Length = 712 Score = 766 bits (1979), Expect = 0.0, Method: Composition-based stats. Identities = 194/560 (34%), Positives = 309/560 (55%), Gaps = 8/560 (1%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSR-GNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 A R L ++ A AI++ DS G + NR E G+ +++IG+ + L Sbjct: 148 AKNRALRASERRYRTLIEVASDAILVTDSETGTLVDCNRQAETLLGMSRNEIIGRHLCNL 207 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 + +A + + G +EL + G + + + G+ + + Sbjct: 208 QQTGNDADGAETDLLGHMLRGKTGTIELSLVRADGTTVPVEVSSSTFEMDGRRYVH--GA 265 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNF 277 DIT+ R A++R++ LA+ D +T LPNR + ++ AI A N+V V+++DLDNF Sbjct: 266 FRDITQRREAEDRIKHLAHHDPLTNLPNRVFLHGRLEQAIELARREQNQVAVMFIDLDNF 325 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL-EAMASR 336 K++ND GH GD LL V+ + + QV+ R GGDEF+V+ + S AMA R Sbjct: 326 KRINDTLGHRIGDALLEQVAARLTENVPGSQVVGRLGGDEFIVVITGNRVSTTSAAMAER 385 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 IL L P+ + ++++ S+GIA+ P G+ + +++HAD AMY AK GR F F+ Sbjct: 386 ILESLCRPYTVEDYQLHSGASIGIAIYPADGNSAETLMKHADAAMYHAKSRGRNTFEFFS 445 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPP 455 +N+ V E L ++ LR AL++ +HYQP+I G + S+EAL+RW+ P G+I P Sbjct: 446 QAINRGVRERLDIENGLRDALKHGGFKLHYQPQIDLTTGSICSVEALLRWRHPLLGVIAP 505 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALK 514 FI AEE+ LI+PLG WVI Q+ WR+ GI +R+AVN+S +QL D++ F AL Sbjct: 506 DRFIPIAEETKLILPLGLWVIDRACHQLRAWRNDGIAGVRMAVNVSVKQLQDESFFEALG 565 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 +++ I++E+TES ++EN ++++ G + +DDFGTGYSSL +L Sbjct: 566 SIVERHGLSGSDIELEITESAIMENLSRVQALLKSLQDYGITLSIDDFGTGYSSLGRLKL 625 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 PI ++K+D+ FV DI + + I+A+ +L L++IAEGVE+ + L +G + Sbjct: 626 LPIQSLKIDRSFVHDIETDHGNAKICDGIIALGHSLGLKIIAEGVETDAQKNLLQNSGCD 685 Query: 635 ERQGFLFAKPMPAVAFERWY 654 QGFL AKP+PA + Sbjct: 686 AIQGFLIAKPLPADDVAKLI 705 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 765 bits (1977), Expect = 0.0, Method: Composition-based stats. Identities = 198/684 (28%), Positives = 331/684 (48%), Gaps = 36/684 (5%) Query: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETT----EPDRTLQLSAEQAARIRE 56 ++T E ++ L + Y+R+ S +L F T EP+ L Sbjct: 400 LQTTSELKAIFQALP--DLYFRVDHDSTILDFKAGRRTDLYLEPEEFLGRRMTDVLPPPV 457 Query: 57 MTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAV--------ARDLSH 108 T + ++ L+ + +++ ++ + T + + + Sbjct: 458 ATQFSGAIDRILSGEARVDLEYVLPMPDGEQTFEARLLPLLQTQIIAVIRNITKRKRAEN 517 Query: 109 GLSFAE----QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL-KEHDV------IGQSVF 157 L AE + A I G+ N G ++ IG+ ++ Sbjct: 518 ELRQAEEKYRSIFENATEGIFQSSPSGSYISANPALARIYGYDSPQELQHHLTDIGRQLY 577 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 ++ G + E + G +++ N N ++ Sbjct: 578 V------NPDRRQQFVHSILEQGQVTDFESQVYRKDGSVIWISENARAVRDRQGNILYFE 631 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLD 275 + DI+ ++A+ + A D +TGLPNR D ++ A+ A + + V +LDLD Sbjct: 632 GTVEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRYQHLLAVFFLDLD 691 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE-AMA 334 FK +ND GH GDQLL+ V+ +L CL +AR GGDEF +L + A +A Sbjct: 692 RFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLPHVQTPADSVKIA 751 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 R+L L+ PF + ++ + S+GIAL P G D T ++R+AD A+Y AKE GR Sbjct: 752 ERLLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRNADAALYRAKEEGRNGLYC 811 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 +TP +N R E L L++ L KALE +L ++YQP+I GE+ LEALVRWQ + GL+ Sbjct: 812 YTPMLNSRGHELLALESELHKALEQQELDVYYQPQINAATGEILRLEALVRWQHSQLGLV 871 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTA 512 P FI AEE+GLI+P+G+WV+ Q +W+ +G L AVN+S RQ + Sbjct: 872 SPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARGFPGLGTAVNLSVRQFQQPHLVQQ 931 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + + LQ +++E+TE+ ++N L +++ + Q+G + LDDFG+GYSSL+ L Sbjct: 932 VAETLQYTGLAADRLELEITETTAMQNVNLTRTLLHELDQMGVGIALDDFGSGYSSLNYL 991 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 +FP+ +IK+D+ F++++ Q++V+A++A+ + LNL V+AEGVES + L G Sbjct: 992 RQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGLNLSVVAEGVESQSQLKVLRSLG 1051 Query: 633 INERQGFLFAKPMPAVAFERWYKR 656 + QG+ F P+ A A + ++ Sbjct: 1052 CDIIQGYFFGPPIAAAAMTQLLEQ 1075 Score = 81.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 15/147 (10%), Positives = 38/147 (25%), Gaps = 4/147 (2%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL-KE 148 + + T + R + A I G R N G Sbjct: 258 TRDITDHKRTESALRQAEEKYR---SIFENAVEGIFQSSPEGRYIRVNPALARMYGYDSP 314 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 +++ + R+ + E + G +++ + Sbjct: 315 EELLAHLTDIGRQLYVDPERRAEFQRLIDQQTIVTHFEAQVYRRDGSIIWITEHARAVRD 374 Query: 209 SGKNEIFLICSGTDITEERRAQERLRI 235 ++ + +IT+ +R + +L Sbjct: 375 GTGKLLYYEGTVENITDRKRTELQLLQ 401 Score = 62.6 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 1/130 (0%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 L + ++ + I ILD++G + + + + G + G+S F L + Sbjct: 145 LIQAEARWRSLIHNSSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGKSAFGLVHPQDR 204 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 + + + VE G FL ++ + DIT+ Sbjct: 205 KQVQQTFQQAITHTEFTLTVEYRFRHQDGSWRFLESTGRNLLADPA-VAGIVVNTRDITD 263 Query: 226 ERRAQERLRI 235 +R + LR Sbjct: 264 HKRTESALRQ 273 Score = 57.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 12/133 (9%) Query: 107 SHGLSFAEQ----VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV--IGQSVFKLF 160 S L + V S ++ D++ ++Q +R C TG ++ G F Sbjct: 19 SRFLRLIDSLPGIVFSGSN------DAQWSMQYLSRGCLALTGYSSDELAQKGGEAFNAI 72 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 + S YEVE I T G+ ++ + + Sbjct: 73 THPEDLPRVLATLSAAIASSEPYEVEYRIRTKSGEEKWVLEKGHRVLDEDQCTCGIEGFI 132 Query: 221 TDITEERRAQERL 233 TDIT +RA+ L Sbjct: 133 TDITPLKRAEAAL 145 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 765 bits (1977), Expect = 0.0, Method: Composition-based stats. Identities = 170/571 (29%), Positives = 279/571 (48%), Gaps = 17/571 (2%) Query: 100 PAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 L + H I+I D I R N TG VIG + Sbjct: 260 ELERLQSDAQLRLSAVAFE-THEGIIITDPDFKILRVNHAFSQITGFDSQRVIGLHL--- 315 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 + + + ++ E G + + Sbjct: 316 ---GNDLWCGLGGLGYELGTLSRWQGETQRLHADGYPYPQWEIVTPVQDDRGEISHFVIC 372 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKV--GVVYLDLDNF 277 DI+E + A+ R++ LA D +TGLPNR + + + HA A + + ++++DLD+F Sbjct: 373 FEDISERKEAERRIQDLAYYDELTGLPNRRQLHETLAHAFGEASRDYLIGALLFIDLDHF 432 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS------ALE 331 K +ND+ GH GD LL++V+ + + LAR GGDEF++L + S S + Sbjct: 433 KTINDSLGHATGDWLLKEVASRLKRLVRQGDCLARLGGDEFVLLLPSLSASPPQAEMQAD 492 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A R+++ + P+ ++ SVGI L P +++ ADTAMY AK GR Sbjct: 493 LIAERLISEIAAPYNHAGQVLHIGASVGITLFPGREQGVDDLLKQADTAMYQAKSAGRKT 552 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK-ITWRGEVRSLEALVRWQSPER 450 F M + L + LR AL +L ++YQP+ + G++ +EAL+RWQ P R Sbjct: 553 RRFFDASMQLQADRRLLIHNELRSALNQQELTLYYQPQHMVEGGDIIGVEALIRWQPPGR 612 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQTI 509 L+ P +FI AEE+ LIV +G WV+ + Q +W + GI++ ++VN+SA+Q Sbjct: 613 ALVSPAEFIPIAEETDLIVDIGNWVLYEACAQYVRWEENGIHIPQLSVNVSAKQFHATDF 672 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 + VL + +++E+TES ++ + E +S + + LG +DDFG GYSSL Sbjct: 673 VDRIHDVLASTGMDPASLNLEITESVVLGHAEDTISKMSELKALGISFAIDDFGAGYSSL 732 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L R P D +K+D+ F++DI + + ++V A++A+A+ + V AEGVES ++ FL Sbjct: 733 SYLKRLPADELKIDRSFIQDIPRDGDNMAIVEAVIAMARHMGFNVTAEGVESRQQLEFLQ 792 Query: 630 KNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 G + QG+L +KP+P ER+ +R + Sbjct: 793 AQGCHFYQGYLASKPLPVPYLERYVQRLARS 823 >UniRef50_A1K7N9 GGDEF/EAL/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K7N9_AZOSB Length = 889 Score = 764 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 197/552 (35%), Positives = 294/552 (53%), Gaps = 10/552 (1%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 + +++ D G IQ NR TG E + IG++ L S R + R Sbjct: 337 LHAVALEGTRDGVMVTDLHGRIQSVNRAFTSITGYSEEEAIGKTPG-LLKSGRHDPSFYR 395 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 SG ++ E+W G+ + + G + TDI++ R+ +E Sbjct: 396 GIWSALLSGGYWQGEIWNRRRNGEVAPHWMSISAVGEQGHPYEHYVAVFTDISQLRQFEE 455 Query: 232 RLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFG 289 R+ LAN D +T LPNR M D ++ AI A + +VGV+ +DLD FK VNDA GH G Sbjct: 456 RVSHLANYDLLTDLPNRLRMSDCLETAIAAARRSHTQVGVMLVDLDRFKNVNDALGHALG 515 Query: 290 DQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRI- 347 D+LL V+ + L H L R GGDEFL++ + A+A + + L PF + Sbjct: 516 DELLAGVAERLRKHLRHGDTLGRYGGDEFLLVLEQLRDAGEAAAVARTMNSALDQPFLMR 575 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 G E+Y S+GI+L PE G + +I+ AD AMY AK GR F + ++ + E L Sbjct: 576 GGQELYIKASIGISLYPEDGDTAAELIKDADAAMYEAKRLGRNTFRYYQEDLTRTANERL 635 Query: 408 WLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG-LIPPLDFISYAEES 465 L++ LR+AL+ ++YQP + GEV EALVR + P+ G I P DFI EES Sbjct: 636 ALESRLRRALDESMFEMYYQPLVALNSGEVLGAEALVRLR-PDGGPRIGPADFIPVLEES 694 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGINLRV-AVNISARQLADQTIFTALKQVLQELNFEY 524 G+I LGRWV +V RQ W D G + ++ +N+SA ++ + L++VL E F Sbjct: 695 GMIAELGRWVQREVCRQGRAWLDAGYDFQLLTLNLSAEEVRRGGVVDNLREVLAETGFPA 754 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 ++VE+TES L++ AL + + LG ++ +DDFGTGYSSLS L FP++ +K+D+ Sbjct: 755 EKLEVEITESGLMQRGSEALDFLYELKGLGVRLSIDDFGTGYSSLSYLKLFPVNKLKIDR 814 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 F+ DI + L I+A+A+ L L V+AEGVE+ + FL + G + QG+L + P Sbjct: 815 GFITDIPEDQNDVQLTTTIIALARNLGLDVLAEGVETEAQRTFLAEKGCDAYQGYLCSPP 874 Query: 645 MPAVAF-ERWYK 655 + A F ER+ Sbjct: 875 VEAAVFQERFLH 886 >UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Q7_DECAR Length = 930 Score = 764 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 170/565 (30%), Positives = 292/565 (51%), Gaps = 6/565 (1%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 R H L+ AE V + + +I++ D+ I N +G ++IGQ Sbjct: 349 IRQIQRGRRVAEHQLNLAEAVFANSVESILVTDADQRIVEVNPAFLRISGYSRSEIIGQH 408 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 L R +AA R + + + +E E+W G+ + V + Sbjct: 409 PRILKSGRHDAAFFARMWQE-LNANDTWEGEVWNRRKNGEIYPALLSIAVVRSQDGKVVN 467 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLD 273 D+++++ + L L D +T LPNR + ++ + +A N + ++ LD Sbjct: 468 YTGMIFDLSQQKTVEALLDQLRTFDGLTALPNRESWLSALEQQLANAKRNSSRFSILQLD 527 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEA 332 LD FK +ND+ G+ GDQ+L + + + L ++AR GG+ F +L + + Sbjct: 528 LDRFKAINDSMGYSVGDQVLIEAAERVKVSLRKYDIVARLGGNRFSILLNEIVDPQTIGG 587 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 + ++LT PF++G I + S S+G+A+ P G DS ++ A++A+Y+AK GR + Sbjct: 588 ICEKLLTAFARPFQMGGINAHISASIGVAIFPNDGLDSKTLMMAAESALYSAKADGRNLY 647 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERG 451 ++ EMN+ L+ LR AL+ ++ + YQP++ + GE+ +EAL+RW +PE G Sbjct: 648 KYYSHEMNEMGTHLFKLERMLRVALDRNEFSVVYQPQVNAKNGELVGVEALLRWHNPELG 707 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIF 510 + + FI AEE+GLIV +G WV+ Q W+ + G + VAVN+SARQ + Sbjct: 708 NVSAVQFIPVAEETGLIVSIGEWVMRAACHQARTWQTELGFEIPVAVNLSARQFRRNDLL 767 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 +++ +L E +++E+TE LI + A+ +++ + LG + LDDFGTGYSSL+ Sbjct: 768 ASVQTILDETGLPNRLLELEITEGSLIVDPIGAIDIMRGLNCLGIKTALDDFGTGYSSLA 827 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L FP++ +K+D+ FVRD+ ++ I+A+ LN++V+AEGVE+ + FL Sbjct: 828 YLKAFPLNRLKIDRAFVRDLPDNESDCAISNTIIALGLNLNMEVLAEGVETEAQRDFLAA 887 Query: 631 NGINERQGFLFAKPMPAVAFERWYK 655 G QG+LF KPM + + Sbjct: 888 AGCQVFQGYLFGKPMSGEDLTQRLQ 912 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 764 bits (1974), Expect = 0.0, Method: Composition-based stats. Identities = 203/650 (31%), Positives = 328/650 (50%), Gaps = 27/650 (4%) Query: 15 GSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESD 74 + P E +L + T E +R + S +R + + ++L Sbjct: 305 HATIPLLLGGEVIGLLNVART---EGERWAEES------LRALQSLGHQFSVALGRARLF 355 Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD---SRG 131 S+ + + SA A L + V + +AI+I D Sbjct: 356 DSLESLVEQ--------RTSALKAEMAEKERAQEQLKLRNRAVDASVNAIIIADKSEPDN 407 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 I N E +G DV G++ L + R + Y + L Sbjct: 408 PIVYANPAFERISGYNLEDVTGRNFLFLLGNETSQLGVANIKRALKSNTEGYAL-LKNYR 466 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G + + + + + D+TE + Q +L D++TGLPNRN + Sbjct: 467 KDGTLFWSELKVAPVTDAKGDVTHFVAILNDVTESIQYQAQLEYKTKYDNLTGLPNRNLL 526 Query: 252 QDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 D I AI +A N + DLDNFK +ND+ GH GDQLL +V+ ++ SCL Sbjct: 527 NDRIQQAIAYAARRNKGFALAVFDLDNFKYINDSMGHETGDQLLTEVAESLRSCLREGDT 586 Query: 310 LARPGGDEFLVLAS-NTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGS 368 LAR GGDEF++L L M +RI + P R+ E+ + S+G+ PE G Sbjct: 587 LARLGGDEFVILMHKEECDRPLGLMLNRIQQLVSQPRRLKDKEILVTPSIGVCQFPEDGE 646 Query: 369 DSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQP 428 D++ ++++ADTAMY AKE GR + C +T EMN+ + + + ++ +LR+ +EN +L ++YQP Sbjct: 647 DASTLLKNADTAMYKAKERGRNRICSYTQEMNESIQKRVQMEQDLRRGIENGELELYYQP 706 Query: 429 KITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR 487 ++ G LEALVRW+ +R ++PPL+FI AEE+GLI + WV+ Q+ WR Sbjct: 707 QLDPHGGGAVGLEALVRWRKGDR-MVPPLEFIPIAEETGLITEVDAWVLRAACLQLKMWR 765 Query: 488 DKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSV 546 D+ + V+VN+S RQ D +++VLQE N E + +E+TES ++ N E AL Sbjct: 766 DQKQQMVPVSVNLSPRQFQDAYCVELVRKVLQESNIEPGCLKIEVTESMVMHNAEEALRT 825 Query: 547 IQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAV 606 + Q +G Q+ +DDFGTGYSSLS L FP D +K+D+ FVR++ P +++RAI+ + Sbjct: 826 MTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAIIGL 885 Query: 607 AQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 + L ++++AEGVE+ ++ +FL + G + QG+ ++ P+P A + + Sbjct: 886 GKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVAACMHFLQE 935 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/P... 928 0.0 UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/P... 925 0.0 UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/P... 925 0.0 UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 924 0.0 UniRef50_C6MMM5 Response regulator receiver modulated diguanylat... 923 0.0 UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Ma... 921 0.0 UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/P... 914 0.0 UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 914 0.0 UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 913 0.0 UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 910 0.0 UniRef50_C5S5K8 Response regulator receiver modulated diguanylat... 910 0.0 UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling p... 910 0.0 UniRef50_A0LKD9 Response regulator receiver modulated diguanylat... 907 0.0 UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 T... 906 0.0 UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/P... 906 0.0 UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/P... 906 0.0 UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/P... 905 0.0 UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 901 0.0 UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/P... 895 0.0 UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/P... 895 0.0 UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/P... 894 0.0 UniRef50_C6ME82 Response regulator receiver modulated diguanylat... 893 0.0 UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromato... 893 0.0 UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/P... 893 0.0 UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/P... 892 0.0 UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/P... 891 0.0 UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/P... 891 0.0 UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS... 891 0.0 UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/P... 890 0.0 UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/P... 890 0.0 UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/P... 890 0.0 UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/P... 889 0.0 UniRef50_A0L8P4 Response regulator receiver modulated diguanylat... 888 0.0 UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/P... 888 0.0 UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncult... 888 0.0 UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus ... 887 0.0 UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/P... 885 0.0 UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteo... 885 0.0 UniRef50_A5GBG4 Response regulator receiver modulated diguanylat... 884 0.0 UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/P... 884 0.0 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 883 0.0 UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/P... 883 0.0 UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (... 883 0.0 UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/P... 883 0.0 UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 883 0.0 UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/P... 881 0.0 UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/P... 881 0.0 UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromob... 879 0.0 UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/P... 879 0.0 UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/P... 879 0.0 UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteob... 877 0.0 UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/P... 877 0.0 UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/P... 877 0.0 UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/P... 876 0.0 UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 876 0.0 UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/P... 875 0.0 UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/P... 875 0.0 UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n... 873 0.0 UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/P... 873 0.0 UniRef50_A0L8C6 Response regulator receiver modulated diguanylat... 871 0.0 UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Hermini... 870 0.0 UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsul... 869 0.0 UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria Re... 869 0.0 UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/P... 869 0.0 UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/P... 869 0.0 UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7... 868 0.0 UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/P... 868 0.0 UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 ... 868 0.0 UniRef50_Q3A4W5 Response regulator receiver modulated diguanylat... 867 0.0 UniRef50_A8FYM5 Signal transduction protein containing a membran... 867 0.0 UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromob... 867 0.0 UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/P... 864 0.0 UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/P... 864 0.0 UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/P... 863 0.0 UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus ... 861 0.0 UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 861 0.0 UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/P... 861 0.0 UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/P... 860 0.0 UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultu... 860 0.0 UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 859 0.0 UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/P... 859 0.0 UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/P... 859 0.0 UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/P... 858 0.0 UniRef50_Q2W4Z4 Predicted signal transduction protein containing... 858 0.0 UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/P... 858 0.0 UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/P... 858 0.0 UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 856 0.0 UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/P... 856 0.0 UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/P... 855 0.0 UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/P... 854 0.0 UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/P... 854 0.0 UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/P... 853 0.0 UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthin... 853 0.0 UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magneto... 853 0.0 UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/P... 853 0.0 UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/P... 853 0.0 UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pe... 852 0.0 UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuni... 852 0.0 UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/P... 852 0.0 UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/P... 851 0.0 UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/P... 851 0.0 UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/P... 851 0.0 UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesari... 851 0.0 UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromato... 851 0.0 UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromob... 850 0.0 UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/P... 850 0.0 UniRef50_B0TF94 Predicted signal transduction domain protein n=1... 850 0.0 UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuni... 849 0.0 UniRef50_Q47HF3 Response regulator receiver modulated diguanylat... 848 0.0 UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/P... 847 0.0 UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/P... 847 0.0 UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/P... 846 0.0 UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/P... 846 0.0 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 845 0.0 UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/P... 845 0.0 UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax... 844 0.0 UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 844 0.0 UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rh... 844 0.0 UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/P... 843 0.0 UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio... 843 0.0 UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/P... 843 0.0 UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/P... 843 0.0 UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/P... 843 0.0 UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/P... 842 0.0 UniRef50_C7RVM5 Response regulator receiver modulated diguanylat... 842 0.0 UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnet... 841 0.0 UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/P... 841 0.0 UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax... 841 0.0 UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/P... 839 0.0 UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/P... 839 0.0 UniRef50_Q21XK7 Response regulator receiver modulated diguanylat... 838 0.0 UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 T... 838 0.0 UniRef50_C7RQ11 Response regulator receiver modulated diguanylat... 838 0.0 UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria... 838 0.0 UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 838 0.0 UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/P... 838 0.0 UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/P... 838 0.0 UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 837 0.0 UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 837 0.0 UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 835 0.0 UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/P... 835 0.0 UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/P... 833 0.0 UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candida... 833 0.0 UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsul... 833 0.0 UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 833 0.0 UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/P... 832 0.0 UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 ... 829 0.0 UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/P... 828 0.0 UniRef50_C1DCZ4 Predicted signal transduction protein containing... 828 0.0 UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 828 0.0 UniRef50_P72843 Regulatory components of sensory transduction sy... 827 0.0 UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/P... 826 0.0 UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/P... 826 0.0 UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & E... 826 0.0 UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica ... 825 0.0 UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/P... 824 0.0 UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/P... 823 0.0 UniRef50_A1TX84 Response regulator receiver modulated diguanylat... 823 0.0 UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 822 0.0 UniRef50_C1DB08 Predicted signal transduction protein containing... 822 0.0 UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 822 0.0 UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/P... 822 0.0 UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/P... 822 0.0 UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/P... 821 0.0 UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/P... 820 0.0 UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxaloba... 820 0.0 UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/P... 819 0.0 UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/P... 818 0.0 UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RR... 818 0.0 UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/P... 818 0.0 UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/P... 817 0.0 UniRef50_A4G3M6 Putative two-component response regulator n=1 Ta... 817 0.0 UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Con... 816 0.0 UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/P... 815 0.0 UniRef50_Q21WZ5 Diguanylate cyclase/phosphodiesterase with PAS/P... 815 0.0 UniRef50_Q21WZ6 Response regulator receiver modulated diguanylat... 815 0.0 UniRef50_B7GKR7 Multidomain signal transduction protein (Contain... 815 0.0 UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalk... 814 0.0 UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/P... 814 0.0 UniRef50_Q2SF23 Predicted signal transduction protein containing... 814 0.0 UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/P... 813 0.0 UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/P... 813 0.0 UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/P... 812 0.0 UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/P... 812 0.0 UniRef50_C5V2W0 Response regulator receiver modulated diguanylat... 812 0.0 UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax... 812 0.0 UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/P... 811 0.0 UniRef50_C6X7I8 Response regulator receiver modulated diguanylat... 811 0.0 UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/P... 811 0.0 UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvib... 811 0.0 UniRef50_Q47ED8 Response regulator receiver modulated diguanylat... 811 0.0 UniRef50_C1DD31 Predicted signal transduction protein containing... 810 0.0 UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=M... 809 0.0 UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/P... 809 0.0 UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax... 809 0.0 UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax... 809 0.0 UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/P... 808 0.0 UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/P... 808 0.0 UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/P... 808 0.0 UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/P... 807 0.0 UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/P... 807 0.0 UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/P... 807 0.0 UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/P... 807 0.0 UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein ... 807 0.0 UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/P... 806 0.0 UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotole... 806 0.0 UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/P... 806 0.0 UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 T... 806 0.0 UniRef50_Q2BPB1 Regulatory component of sensory transduction sys... 805 0.0 UniRef50_Q2W7U0 Predicted signal transduction protein containing... 805 0.0 UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodi... 804 0.0 UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/P... 804 0.0 UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/P... 804 0.0 UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/P... 804 0.0 UniRef50_Q5NZD7 Putative signal transducer protein with histidin... 803 0.0 UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/P... 803 0.0 UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/P... 803 0.0 UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/P... 803 0.0 UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/P... 802 0.0 UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=unc... 802 0.0 UniRef50_A8FY98 Signal transduction protein containing a membran... 802 0.0 UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus... 802 0.0 UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobact... 801 0.0 UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/P... 800 0.0 UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammapr... 800 0.0 UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/P... 799 0.0 UniRef50_A9BRL9 Diguanylate cyclase/phosphodiesterase with PAS/P... 799 0.0 UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/P... 799 0.0 UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/P... 797 0.0 UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Ca... 797 0.0 UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC ... 797 0.0 UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoa... 797 0.0 UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling p... 796 0.0 UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/P... 796 0.0 UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (... 796 0.0 UniRef50_Q31NI4 Response regulator receiver modulated diguanylat... 796 0.0 UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/P... 796 0.0 UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/P... 795 0.0 UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/P... 794 0.0 UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/P... 794 0.0 UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/P... 794 0.0 UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH 794 0.0 UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/P... 794 0.0 UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermane... 794 0.0 UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/P... 793 0.0 UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/P... 793 0.0 UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Ta... 792 0.0 UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/P... 792 0.0 UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/P... 792 0.0 UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromatic... 792 0.0 Sequences not found previously or not previously below threshold: >UniRef50_Q39R25 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Bacteria RepID=Q39R25_GEOMG Length = 905 Score = 928 bits (2399), Expect = 0.0, Method: Composition-based stats. Identities = 211/658 (32%), Positives = 333/658 (50%), Gaps = 20/658 (3%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMS 67 + + L + V + E R L+ Q RI ++ + Sbjct: 237 NRAAVEIFGWSAEEVLGKPYPV---APAERAAEHRKLRELVLQGKRITDVE------LRR 287 Query: 68 LTVDESDLSVHLVGRKINKREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 D S + V L I + + L ++ + + + I I Sbjct: 288 RRKDGSPIDVSLSAAPICDGSGTPLGVITIISDISARKRNEQELVLLKRAMESSINGITI 347 Query: 127 LDS---RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 D+ I N E TG +VI ++ L R+ A ++ + F+ Sbjct: 348 TDATHPDNPIIYVNPAFERITGYGVDEVIDKNPRFLRGDDRDQAELKKLVQA-FKEEREG 406 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 L G + I DITE RR +E+L A D +T Sbjct: 407 CFVLRNYRKDGSPFWNELFIAPVRDRDGVVTNYIGVMNDITEHRRYEEQLVYQATHDPLT 466 Query: 244 GLPNRNAMQDLIDHAINH---ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 GLPNRN +QD + A+ N + V++LDLDNFKKVND GH GD LL+ V+ + Sbjct: 467 GLPNRNLLQDRLGQALALEAFRRRNPICVMFLDLDNFKKVNDTLGHTVGDMLLKAVANRL 526 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 +CL +AR GGDE++++ N + + +A +++ P + E+Y + S+G Sbjct: 527 KNCLRGGDTVARLGGDEYIIVLPNVREVPDVITVAKKMINVFAAPLLLMGNEIYVTASIG 586 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 IAL P G A++++AD AMY AKE G+ + ++ EMN RVFE L L+T+L +A++N Sbjct: 587 IALFPTDGETVDALLKNADAAMYHAKEQGKNNYQFYSAEMNIRVFERLSLETSLHRAVKN 646 Query: 420 DQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 + ++HYQP++ R G + +EALVRW PE GL+ P FI AEE+GLIVP+G WV+ Sbjct: 647 QEFLLHYQPRVDLRNGRICGVEALVRWNHPEMGLVSPAKFIPLAEETGLIVPMGEWVLRT 706 Query: 479 VVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 Q W+D G+ LR+AVN+SARQ + + ++++L E +++ELTES ++ Sbjct: 707 ACAQNKAWQDAGLPPLRMAVNLSARQFRQENLIAMVEEILMETGLAPQWLELELTESLVM 766 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 + E + +++++ + G +V +DDFGTGYSSLS L RFPI +K+DQ F+RD+ + P Sbjct: 767 QEAEKSAAILRELTDRGIEVAIDDFGTGYSSLSYLKRFPIANLKIDQAFIRDMTRDPDDA 826 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +LV+ I+ +A L ++ IAEGVE A++ FL ++ E QG+ F++P+ A R Sbjct: 827 TLVKTIITMAHGLGMKTIAEGVELAEQIDFLCRHQCEEMQGYYFSRPITAEELGRLLA 884 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 70/233 (30%), Gaps = 16/233 (6%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLS--AEQAARI----REMTVI 60 L + S + + + L E+ +R+ + Sbjct: 109 LNPAAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTPLVCCGEEHSRLTCEAEGIRSD 168 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 S +L++ + + G ++ L + ++ + Sbjct: 169 GSRFPAALSLSRVQMKGVW--------HFLGIVRDVTESRETGERLRETNEKLDTLIQAS 220 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 IV +D G + +NR + G +V+G+ AA R+ + + Sbjct: 221 PQGIVAVDCGGKVTLWNRAAVEIFGWSAEEVLGKPYPV--APAERAAEHRKLRELVLQGK 278 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 +VEL G + + + + +I +DI+ +R ++ L Sbjct: 279 RITDVELRRRRKDGSPIDVSLSAAPICDGSGTPLGVITIISDISARKRNEQEL 331 Score = 78.8 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 6/122 (4%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF---MSRREAAASRRN 172 ++ I+ D G + N E G + + G+S+ + + ++ Sbjct: 89 LLDHIADGIISFDGAGRLLSLNPAAEQLFGYQSAEATGRSLGDILAIRSTGKDNPLLTPL 148 Query: 173 NRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQER 232 + E G R + G + D+TE R ER Sbjct: 149 V-CCGEEHSRLTCEAEGIRSDGSRFPAALSLSRVQMKG--VWHFLGIVRDVTESRETGER 205 Query: 233 LR 234 LR Sbjct: 206 LR 207 >UniRef50_C6X6V4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X6V4_METSD Length = 1126 Score = 925 bits (2393), Expect = 0.0, Method: Composition-based stats. Identities = 211/594 (35%), Positives = 329/594 (55%), Gaps = 10/594 (1%) Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 + + + V E G ++ L A QV IVI Sbjct: 523 RVVWMKDIVKVIPNMSNTRPAELVGVMLDI----TASKAAEADLRLARQVFDNTAEGIVI 578 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D + N+ + TG + ++IG+ + EAA R + E Sbjct: 579 TDPAFRVLEVNQAYQQITGYDKEEIIGKLPSVMQAGLHEAA-YYEGIWQTLRREGQWVGE 637 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 +W G+ + + + + + + TDIT+ + ++ERL+ LAN D++T LP Sbjct: 638 IWNRRKSGESYPEWLSISQVADAKGSVQNYVAVFTDITQRKLSEERLQFLANHDALTHLP 697 Query: 247 NRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR +Q+ ID A+ A NK + V+++DLD FK +ND GH GD LL++ + + CL Sbjct: 698 NRALLQERIDQALFRAQRNKTAIAVLFIDLDRFKIINDTLGHQTGDMLLQEAAKRLKECL 757 Query: 305 EHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 +AR GGDEF+VL + + L +A +I+ L PF + E++ S S+GI++ Sbjct: 758 RETDTVARQGGDEFVVLVEDCGDTDYLNTIARKIMATLAQPFILVGRELFISASIGISVY 817 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P+ G D+ ++++HAD AMY AKE G+ F + E N E L L+ NLR+A+E ++ V Sbjct: 818 PDDGLDTASLLKHADAAMYRAKESGKNTFRFYAAEANTNSVELLTLENNLRRAVERNEFV 877 Query: 424 IHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 +HYQPK+ R + + EA+VRWQ PE G++ P+ FI AEE+GLI+ +G W++ + RQ Sbjct: 878 LHYQPKVDLRSQKIIGAEAVVRWQHPELGMLSPMQFIPLAEETGLIIDIGAWIMRESCRQ 937 Query: 483 VAKWRD-KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 +W+ G N+RVAVN+SARQ D+T+ + L E +++E+TES ++ N E Sbjct: 938 AVEWQQLTGQNVRVAVNLSARQFRDETLRQTIADALTESGLTPDCLELEITESMIMHNAE 997 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 A V+Q F LGA V +DDFGTGYSS L FPID++K+D+ FVRDI ++ + Sbjct: 998 RAREVLQHFHDLGAHVLIDDFGTGYSSFGYLKHFPIDSLKIDRSFVRDIPDDVDDMAITQ 1057 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 AI+A+A +L ++V+AEGVE+ ++ AFL K G ++ QGFLF++P+ + F R K Sbjct: 1058 AIIAMAHSLQIKVVAEGVETQEQLAFLKKQGCDQIQGFLFSEPLHSHDFVRMLK 1111 Score = 61.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 38/139 (27%), Gaps = 8/139 (5%) Query: 99 TPAVARDLSHGLSFAEQVVSE---AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV-IGQ 154 L L + ++ + + I+ RG I N G D+ +G Sbjct: 299 RIRSEARLKEQLDTYDALLHAQADVNEGVAII-HRGKIVYGNDALWRIGGYSPGDIPLGS 357 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 F L S + E G+ + + + + Sbjct: 358 DFFSLIHPSDRKRVSEIYQQRLQDMDVPTRYEALGLGKNGRAIHIEIAAAQYRDDSQRI- 416 Query: 215 FLICSGTDITEERRAQERL 233 + DI+ ++A+ L Sbjct: 417 --VTLIIDISSRKKAEAEL 433 Score = 57.6 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 67/233 (28%), Gaps = 19/233 (8%) Query: 13 FLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDE 72 +G ++P L P ++S R+++M V T + L + Sbjct: 344 RIGGYSPGDI------PLGSDFFSLIHPSDRKRVSEIYQQRLQDMDVPTRYEALGLGKNG 397 Query: 73 SDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGL----SFAEQVVSEAHSAIVILD 128 + + + + + + + L ++V + + Sbjct: 398 RAIHIEIAAAQYRDD--SQRIVTLIIDISSRKKAEAELVKSQQDYRELVESVQAIVWRAI 455 Query: 129 SRGNIQRFNRLCEDYTGLKEHDVI---GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 G ++ E G G V K+ R+ +++ Sbjct: 456 PGGKFTFVSKEAEALLGYPLAQWTTDPGFWVDKIHPDDRDWVVEYCRTESL--KLQSFDF 513 Query: 186 ELWIPTCKGQRLFLFRNKFVHSG-SGKNEIFLICSGTDITEERRAQERLRILA 237 + + G+ +++ V S L+ DIT + A+ L LA Sbjct: 514 DYRMIAADGRVVWMKDIVKVIPNMSNTRPAELVGVMLDITASKAAEADL-RLA 565 >UniRef50_C5V1I4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V1I4_9PROT Length = 935 Score = 925 bits (2392), Expect = 0.0, Method: Composition-based stats. Identities = 209/639 (32%), Positives = 323/639 (50%), Gaps = 14/639 (2%) Query: 21 WRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLV 80 W + + +L + R V L L + V + Sbjct: 303 WLVGAALGLLF-AWLGWLMAGRIA--RPISLISQAADKVAGGDLEYELPARLGEGEVAHL 359 Query: 81 GRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLC 140 I+ ++ GL + +V AI+I D+ NI N+ Sbjct: 360 STAIHD-----MVVNLTHEIKQRKEAEQGLRLSAKVFESNTEAIMITDAEQNIVMVNQAF 414 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 TG +V+GQ KL S R R+ + + E+W G+ + Sbjct: 415 TQITGYGADEVLGQRP-KLLSSGRHGPEFYEAFWHALRANDLWRGEIWNKRKNGEIFPEW 473 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 + DITE ++ +ER+ LAN D +TGLPNR + D I+ A + Sbjct: 474 VTISALRDETSQISHYVAVFLDITERKKEEERINYLANYDVLTGLPNRYLLSDRIEQAFS 533 Query: 261 HADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 A N KV V+++DLD FK +ND+ GH GD LL+ V+ + +CL +AR GGDEF Sbjct: 534 SAQRNNFKVAVLFIDLDYFKNINDSLGHDIGDALLKLVAARLKTCLRRSDTIARLGGDEF 593 Query: 319 LVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 + L S + +A +++ L F +G ++ + S+GI + P+ G S ++R+A Sbjct: 594 VALLSELDSSEEVIFVAEKMIESLTEKFTLGEYQLSITPSIGICIYPDDGETSVELLRNA 653 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEV 436 D AMY AK+ GR F ++P+MN++ E L L+T LR A+ QL ++YQPK++ G++ Sbjct: 654 DLAMYQAKDDGRNNFKFYSPDMNRKALERLKLETFLRVAIVQQQLSVYYQPKVSVLSGKM 713 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RV 495 +EAL+RWQ PE G I P FI AEE+GLI +G WV+ Q W+ +G ++ + Sbjct: 714 TGMEALLRWQHPELGFISPAVFIPIAEETGLINEIGDWVLRQSCLQARLWQAQGYDIVPI 773 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 AVN+SARQL + +L+E + + +E+TES L+ E L +++Q G Sbjct: 774 AVNLSARQLKQDNFAARVVTILREAGLDAHYLVLEITESMLMSTGESGLQILEQLRDDGV 833 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 ++ LDDFGTGYSSLS+L P+D++K+DQ FVRDI P S+V A +A ALNL+V Sbjct: 834 RLALDDFGTGYSSLSRLKNLPLDSLKIDQSFVRDIVTDPNDASIVSATAVLAHALNLKVT 893 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 AEGVE+ ++ F+ E QG+LF++P+PA +++ Sbjct: 894 AEGVETQEQLDFIRMLNCEEYQGYLFSRPIPASEVVKYF 932 >UniRef50_C7RNA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNA9_9PROT Length = 1399 Score = 924 bits (2390), Expect = 0.0, Method: Composition-based stats. Identities = 198/660 (30%), Positives = 313/660 (47%), Gaps = 16/660 (2%) Query: 7 STTLYNFLGSHNPY-WRLTESSDVLRFS--TTETTEPDRTLQLSAEQAARIREMTVITSS 63 L + L + + + ++ Sbjct: 745 CNRATLELLGYGSKAQLLGRDAADISPARQPDGQASGEKAA-----ALIAAALRIGYHRF 799 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 D S + V + I R + W D + R L + A Sbjct: 800 EWTHQRADGSPVPVEVTLTPITLRGEVILHTLWRD-ISERRVTETRLRLLAAAFEHSAEA 858 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 I++ D I N TG +V G L S R +A R S + Sbjct: 859 IMVSDRDNRILEVNDAFCRLTGYAADEVRGSDPR-LLSSGRTSAEEYRTMWQAINSTGHW 917 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 + E+W G + + G+ N + I S DI+E + A+E++ LA+ D++T Sbjct: 918 QGEVWDRRKDGSYYPKWLSISTIRGAEGNTEYYIGSFVDISERKAAEEKISHLAHFDTLT 977 Query: 244 GLPNRNAMQDLIDHAINHADN----NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 LPNR+ +Q +D A+ A V V++LDLD FK +ND GH GD LL +V+ Sbjct: 978 DLPNRSNLQGRLDQALASARREGHGRSVAVMFLDLDRFKNINDTLGHHVGDALLLEVAAR 1037 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 + S + V+AR GGDEF+V+ + A E +A +IL L ++I ++++ S+G Sbjct: 1038 LRSSVRDSDVVARLGGDEFVVVLTGADALAAERVAGKILKALSRAYQIEGHALHSTSSIG 1097 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 IA+ P G ++++AD AMY AK GR FT MN+ + L+ +L AL+ Sbjct: 1098 IAVFPADGESVEVLMQNADAAMYHAKSAGRNNVQFFTASMNEAASDRRQLEEDLHLALQQ 1157 Query: 420 DQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 Q V+HYQP++ + V ++EAL+RWQ P GL+PP F+ AE++GLIVP+G+WV+ Sbjct: 1158 KQFVLHYQPQVDAQRRVFAVEALLRWQHPHHGLVPPARFVPLAEDTGLIVPIGQWVLETA 1217 Query: 480 VRQVAKWR--DKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 Q+ W + L+VAVN+SARQ L+Q + + +ELTES ++ Sbjct: 1218 CAQIKAWSVDARTRKLQVAVNVSARQFRQPDFVELLRQAIDNSGANPARLKLELTESLVL 1277 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 +N + + LG +DDFGTGYSSLS L R P+D +K+D+ FV + + Sbjct: 1278 DNVADTIDKMNAIKLLGVTFSMDDFGTGYSSLSYLTRLPLDQLKIDRAFVCRLPENRSDA 1337 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 + + IV + ++L L+V+AEGVE+ + FL +G + QGFLF++P+ AFE + + + Sbjct: 1338 VIAQTIVTMGRSLGLKVVAEGVETEAQRQFLDSHGCDGYQGFLFSRPLAVDAFEDFLQGF 1397 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 80/255 (31%), Gaps = 21/255 (8%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + V + + P + +SS V S + ++ A A + E + Sbjct: 493 RCVVSCNRRLEEIFGYAPGELIGKSSQVFYPS------IEVFEKIGARAYAVVAENRNFS 546 Query: 62 SSLMMSLTVDESDLSVHLVGRKINK-REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 L + D S L GR I+ + AG+ + D + + V ++ Sbjct: 547 GELTLR-RKDGSLFWGALTGRAIDPSQPHAGSIWVFADISERREAEEESRNLLQAV-EQS 604 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 AIVI + I+ N TG + IGQ+ L + + R+ G Sbjct: 605 PVAIVITNRNAEIEYVNPSFTRVTGYSRLEAIGQNPRILQSGE-APSDTYRSLWQTLLEG 663 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR--ILAN 238 + G+ + + G + D+TE RA + L+ A Sbjct: 664 KVWTGLFHNRRKNGELFWEKASIAPIIGDHGEVTHYLAVKEDVTERLRADKLLQESEEAF 723 Query: 239 TDSITGLPNRNAMQD 253 R +D Sbjct: 724 ---------RRLFED 729 Score = 91.5 bits (227), Expect = 1e-16, Method: Composition-based stats. Identities = 25/240 (10%), Positives = 73/240 (30%), Gaps = 13/240 (5%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQA-ARIREMTVITS 62 + + + ++ + ++ +L+ + D L ++ Sbjct: 617 IEYVNPSFTRVTGYSRLEAIGQNPRILQ---SGEAPSDTYRSLWQTLLEGKVWTGLFHNR 673 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 L +++ ++ ++G + + + L ++ +A Sbjct: 674 RKNGELFWEKASIA-PIIGDHGEVTHYLAVKEDVTERLRADKLLQESEEAFRRLFEDAKD 732 Query: 123 AIVILDSRGNIQRFNRLCEDYTGL-KEHDVIGQSVFKL----FMSRREAAASRRNNRVFF 177 +++L G+ NR + G + ++G+ + + + Sbjct: 733 PLLLL-KDGSFIDCNRATLELLGYGSKAQLLGRDAADISPARQPDGQASGEKAAALIAAA 791 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + E G + + + G+ + + DI+E R + RLR+LA Sbjct: 792 LRIGYHRFEWTHQRADGSPVPVEVTLTPITLRGEVILHTLW--RDISERRVTETRLRLLA 849 Score = 84.2 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 47/167 (28%), Gaps = 6/167 (3%) Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA----EQV 116 T + + + ++H + N + + + +++ E + Sbjct: 420 TGEIELRSLSGRTTPAIHTLFVVHNTADEPPVIATVLADISERKEMEERNRQLLAEMETL 479 Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 + A IV L + + NR E+ G ++IG+S + S Sbjct: 480 LGNALVGIVHL-RQRCVVSCNRRLEEIFGYAPGELIGKSSQVFYPSIEVFEKIGARAYAV 538 Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 + EL + G + + I DI Sbjct: 539 VAENRNFSGELTLRRKDGSLFWGALTGRAI-DPSQPHAGSIWVFADI 584 Score = 77.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 52/169 (30%), Gaps = 14/169 (8%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 +++ A + + R S L +++ A I + G++ N Sbjct: 321 SEQREAKVVADLVERDRQLRANSERLEIFQRLAENAGQGIGMAQLDGSLLYANPALRRMI 380 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 + + FK F SR EA + + E+ + + G+ F Sbjct: 381 DMPQGAACSDYSFKQFYSREEANRLQHAVLPMLLPAGQWTGEIELRSLSGRTTPAIHTLF 440 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 V + + DI+E + +ER NR + + Sbjct: 441 VVHNTADEPPVIATVLADISERKEMEER--------------NRQLLAE 475 >UniRef50_C6MMM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. M18 RepID=C6MMM5_9DELT Length = 1097 Score = 923 bits (2387), Expect = 0.0, Method: Composition-based stats. Identities = 210/606 (34%), Positives = 330/606 (54%), Gaps = 9/606 (1%) Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 L +L +L H + ++ E AG SA A RD L ++ + + Sbjct: 353 GRLATALNCMADELQGHRLLQEERTAELAGANSALETEIAEHRDAEEALRQRQRAIDSSS 412 Query: 122 SAIVILDS---RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 + I+I D+ I N E TG +V+G++ L RE RV Sbjct: 413 NGIMITDALELDHPIIYVNPAFERITGYAASEVLGRNPRLLCSGDREQLGL-EVIRVALC 471 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 EL G + + + + DITE +R +E+L +N Sbjct: 472 ELREGHAELRNYRKDGSLFWNALSVSPVLNAAGEVTNYVGIVNDITERKRYEEQLEYQSN 531 Query: 239 TDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDV 296 D +TGLPNRN + D I A+ +A+ + V ++DLD+FK +ND+ GH GD+LL+ Sbjct: 532 HDGLTGLPNRNLLGDRIGQALTYAERYQRQTAVFFIDLDHFKFINDSLGHDMGDKLLQIA 591 Query: 297 SLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTS 355 + + C+ +AR GGDEF+++ S+ + +A +I + P++IG E+ S Sbjct: 592 ARRLSECVRSIDTVARHGGDEFVIVLSDLAVSEDAAKVARKIQDAVCRPYQIGEHELVVS 651 Query: 356 CSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRK 415 CS GI+L P+ GSD+ ++++AD AMY AK+ GR F +T ++N V L ++ LR+ Sbjct: 652 CSTGISLYPKDGSDAQVLLKNADVAMYRAKQCGRNNFQFYTGDLNDIVLARLTMEKYLRR 711 Query: 416 ALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRW 474 ALE D+ ++HYQPK+ G + +EALVRWQSPE G I P FI AEE+GLIV +G W Sbjct: 712 ALERDEFLVHYQPKVDLLSGRITGMEALVRWQSPELGFISPASFIPLAEETGLIVAIGEW 771 Query: 475 VILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTE 533 V+ Q W+D G+ + VAVN+S RQ + + + ++ +E I++E+ E Sbjct: 772 VLRTACAQNKAWQDDGLPPMVVAVNLSPRQFRQEDLADTVHRIAEETGLAPRYIELEVVE 831 Query: 534 SCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQ 593 S L+++ + A++++ +LG Q+ +DDFGTGYSSLS L RFP D +K+DQ FVRDI + Sbjct: 832 SLLMDDVDGAVAMLDALKELGVQLTMDDFGTGYSSLSYLKRFPFDMMKIDQSFVRDITRD 891 Query: 594 PVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 P S ++VR ++++A LNL+V+AEG+E+ + +L +E QGF F++P+PA FE+ Sbjct: 892 PGSAAIVRTVISLAHTLNLRVVAEGIETEGQLGYLRGLACDEMQGFYFSRPVPAAEFEQM 951 Query: 654 YKRYLK 659 + Sbjct: 952 LRDQRH 957 >UniRef50_Q2W807 Predicted signal transduction protein n=4 Tax=Magnetospirillum RepID=Q2W807_MAGSA Length = 880 Score = 921 bits (2382), Expect = 0.0, Method: Composition-based stats. Identities = 190/575 (33%), Positives = 310/575 (53%), Gaps = 11/575 (1%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 A + A L+ A +V+ + I+I+DS I+ N TG ++IG Sbjct: 300 EALKERDAALLRSRKDLNLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIG 359 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 ++ L S ++ + + ++ E+W G+ + V + Sbjct: 360 KNPNVL-KSGHHDETFYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDI 418 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVY 271 +DITE ++ +ER++ LA D +T LPNR D + AI +A + ++ +++ Sbjct: 419 TQYAAIFSDITERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMF 478 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SAL 330 LDLD FK++ND+ GH GDQ+L + + I C+ +AR GGDEF VL + Sbjct: 479 LDLDLFKRINDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDV 538 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 +A R++ ++ PF + E+Y + S+GIA+ PE G+ A+I++ADTAMY AK+ GR Sbjct: 539 AKLAERVIAHVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRN 598 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPE 449 + ++T MN R FE L ++++LR AL ++ + YQ K+ G + +EALVRW PE Sbjct: 599 SYQLYTAAMNARSFERLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPE 658 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQT 508 GL+ P+DFI AE G+I +G WV+ RQ W D G+ +R+AVN+SA+Q + Sbjct: 659 MGLVSPVDFIPLAEAMGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQFVETD 718 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + + + L+E +++ELTE+ L++ + ++V++ +G ++ +DDFGTGYSS Sbjct: 719 VPEVVARALRETGLPPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSS 778 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQ-----PVSQSLVRAIVAVAQALNLQVIAEGVESAK 623 LS L R PIDA+K+D+ FV DI +V I+ +A L L+ IAEGVE+ + Sbjct: 779 LSYLKRMPIDALKVDRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPE 838 Query: 624 EDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 + FL G +E QG+L ++P+ + R L Sbjct: 839 QAEFLRSKGCDEVQGYLISRPVSGEDLISLFDRNL 873 >UniRef50_Q31GH8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=3 Tax=cellular organisms RepID=Q31GH8_THICR Length = 1466 Score = 914 bits (2364), Expect = 0.0, Method: Composition-based stats. Identities = 177/571 (30%), Positives = 316/571 (55%), Gaps = 5/571 (0%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 + + + + A +V ++ I+I DS I N + +G + +G Sbjct: 897 HGFITDISQHKKTEAQIELASKVFEQSREGIMITDSNQKILMVNEAFSEISGYSVEETLG 956 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 ++ L R + +N + ++ E+W G+ + + + N Sbjct: 957 KTPRMLASGRH-SREFYQNVWKSIKEKGHWQGEIWNRRKNGEIFPEWLSISRGLDTSGNV 1015 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVY 271 + DI++ + ++E+++ LA+ D +TGL NR + D ++H+I+ AD N + +++ Sbjct: 1016 TEYVGIFNDISKVKESEEKIKHLAHYDPLTGLVNRELLMDRLNHSISTADRNNTPLALLF 1075 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE 331 +DLD+FK VND GH GDQLL +V IL L + +AR GGDEF+V+ +T ++ Sbjct: 1076 IDLDHFKNVNDTLGHQVGDQLLIEVGQRILKILRDEDTIARQGGDEFIVVLPDTGENGAV 1135 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A +IL + + +++ + S+GIA+ P+ G D+ +++++ADTAMY AK GR Sbjct: 1136 HVAEKILESISDQLNLKPYKLFITPSIGIAVYPQDGKDADSLLKNADTAMYQAKNDGRNV 1195 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPER 450 + FT EM + +++ LR AL + Q ++YQP+ G + +EAL+RW PE Sbjct: 1196 YRFFTMEMQAHSSRIMQIESALRVALFDQQFELYYQPQTCAKSGSIIGVEALIRWNHPEM 1255 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTI 509 G + P +FI AE+SG I+ +G WV+ +RQ+ W + G ++VAVN+SA Q + + Sbjct: 1256 GPVSPQEFIPVAEQSGQILAIGWWVLRTAIRQIKIWSEHGKPCIKVAVNLSAVQFRYEDL 1315 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 + ++L+E +++ELTES + N E + ++ + G ++ +DDFGTGYSSL Sbjct: 1316 PKQVMKILEEEGVSPEFLELELTESVAMANPEAVIEMMDKLVGHGIKMSIDDFGTGYSSL 1375 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 S L RF + +K+DQ F+RD+ +S++ AI+++++AL L+ IAEGVE+ + FL Sbjct: 1376 SYLKRFKVSKLKIDQSFIRDLAVDSDDRSIIEAIISLSKALGLKTIAEGVETQAQLDFLQ 1435 Query: 630 KNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 + +E QGF ++K + AF+ +Y++ ++ Sbjct: 1436 EKQCDEIQGFYYSKALTPEAFDAFYEKQSQK 1466 Score = 91.9 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 7/207 (3%) Query: 36 ETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASA 95 E P +++A+ + ++ + L D+S + + + + Sbjct: 398 EIIHPKDLAEVNAQLTDIESGKSEGFTTELHLLASDDSIVFGTINVKCVRGENGRVQYYL 457 Query: 96 WH-DTPAVARDLSH----GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 + L+ + +V + + D+ G N E + G KE D Sbjct: 458 MTVQDVTELKHLAELNIEHQNQLNALVHTIPDLVWLKDTEGLYLACNPSFERFFGAKEAD 517 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIP-TCKGQRLFLFRNKFVHSGS 209 +IG++ + + A R N+ + + E E W+ + G R K Sbjct: 518 IIGKTDYDFV-DKALADFFRENDCNAMAAEESIENEEWLTFSENGYRGLFSTIKTPMKNE 576 Query: 210 GKNEIFLICSGTDITEERRAQERLRIL 236 I ++ DI++ + + +L L Sbjct: 577 EGQVIGVVGVARDISKRKEDEAQLERL 603 Score = 62.2 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 44/144 (30%), Gaps = 4/144 (2%) Query: 97 HDTPAVARDLS--HGLSFAEQVVSEAHSAIVILDSRG-NIQRFNRLCEDYTGLKEHDVIG 153 D + R ++ + ILD++ RFN D+ Sbjct: 334 RDLQVLERYAEKTEAEKVLQKFYELPFIGMAILDAQHDKWIRFNDRLPKILRYSSQDLAQ 393 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 +S ++ + A + + + + EL + +F N G Sbjct: 394 KSFNEIIHPKDLAEVNAQLTDIESGKSEGFTTELHLLASDDSIVFGTINVKCVRGENGRV 453 Query: 214 IFLICSGTDITEERR-AQERLRIL 236 + + + D+TE + A+ + Sbjct: 454 QYYLMTVQDVTELKHLAELNIEHQ 477 >UniRef50_Q21SZ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q21SZ9_RHOFD Length = 1169 Score = 914 bits (2363), Expect = 0.0, Method: Composition-based stats. Identities = 203/662 (30%), Positives = 320/662 (48%), Gaps = 22/662 (3%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARI---------REMTVITSSL 64 LG Y+ S L + E + +AA I + T Sbjct: 510 LGLDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPEAASICLSALREANEKGTSTGKQF 569 Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 + L + + + + + +R+ + L A + + Sbjct: 570 ELQLAHGRAWFELSVARKSVGQRQEPRFIV-LSRDITERKQAEEALRIAATAFE-SQEGM 627 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 + D++G + R NR + TG +V+G + L R + A R +++ Sbjct: 628 TVTDAQGAVLRINRAFTEITGYSADEVVGHNPRLLQSGRHDKA-FYAAMWESIRRTGSWQ 686 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ + +G + + DIT + A++ +R LA D TG Sbjct: 687 GEIWNRRKNGEAYPELLSITAVKENGGIVTHYVGTFMDITRRKAAEDEIRNLAFFDLQTG 746 Query: 245 LPNRNAMQDLIDHAINH--ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR + D + A+ + ++ +DLDNFK +ND GH GD LL+ V+ + S Sbjct: 747 LPNRRLLLDRLQQALAASARHRRQGALLLIDLDNFKTLNDTLGHDKGDLLLQQVAQRLAS 806 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQ------SALEAMASRILTRLRLPFRIGLIEVYTSC 356 C+ +AR GGDEF+V+ N S+ + E +A RIL L+ + + E ++ Sbjct: 807 CVHEGGTVARLGGDEFVVMLENLSEHLEAAATQAETLAKRILASLKQTYSLDGYEYQSTA 866 Query: 357 SVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKA 416 S+GI L E + +++ AD AMY AK GR F PEM V L+ LR+A Sbjct: 867 SIGITLFSEQQETTEDLLKRADLAMYQAKAVGRNTLRFFDPEMQAVVTSRAALEAGLRRA 926 Query: 417 LENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVI 476 + +D+ +++YQ ++ +G + EAL+RWQ PERGL+ P +FI+ AE++GLI+PLGRWV+ Sbjct: 927 VTSDEFLLYYQAQVDGQGHLTGCEALLRWQHPERGLVAPGEFIALAEDTGLILPLGRWVL 986 Query: 477 LDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTES 534 Q+A+W R + +L VAVN+S RQ + VL + +ELTES Sbjct: 987 DAACTQLAQWATRPEMAHLTVAVNVSVRQFHQADFVNQVLTVLDSTGTNPQRLKLELTES 1046 Query: 535 CLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQP 594 LI + E ++ + + G LDDFGTGYSSLS L R P+D +K+DQ FVR+I P Sbjct: 1047 LLIGDVEDVIAKMSILKEKGVGFSLDDFGTGYSSLSYLKRLPLDQLKIDQGFVRNILIDP 1106 Query: 595 VSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 ++ R ++A+ +L L VIAEGVE + FL + G + QG+LF +P+P FE + Sbjct: 1107 NDAAIARMVIALGDSLGLAVIAEGVEIEAQRDFLARLGCHACQGYLFCRPLPLDQFEAFV 1166 Query: 655 KR 656 +R Sbjct: 1167 RR 1168 Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 69/233 (29%), Gaps = 20/233 (8%) Query: 17 HNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQA-----ARIREMTVITSSLMMSLTVD 71 H ++L + L R ++L+ A I E+T L Sbjct: 388 HQRAYQLFVEAADLADKVAREKASARMVELAERYATENKQREINELTRRNEQQSAELRQR 447 Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVAR-------DLSHGLSFAEQVVSEAHSAI 124 + +AG+A R + + + + Sbjct: 448 ALQERWLWTVLGGSALVFAGSAYFLLRLRRSNRMLEALNTQVQRSQNQLQATFDAIPDPL 507 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA---AASRRNNRVFFRSGN 181 +L G D D+IG++V + + +A R N +G Sbjct: 508 FVLGLDGRYYDCRSSRADLLAAPAEDLIGKTVSDVLPPEAASICLSALREANEKGTSTGK 567 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 +E++L + + S + E I DITE ++A+E LR Sbjct: 568 QFELQLAHGRA-----WFELSVARKSVGQRQEPRFIVLSRDITERKQAEEALR 615 >UniRef50_C5V3L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3L4_9PROT Length = 900 Score = 913 bits (2361), Expect = 0.0, Method: Composition-based stats. Identities = 182/575 (31%), Positives = 288/575 (50%), Gaps = 12/575 (2%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 + L + I+I D + R N TG + IG Sbjct: 319 VTVTTDITKRKQFESELRVSATAFE-TQEGILITDENNVMLRTNAAFTAITGYTNKEAIG 377 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 Q+ L S R+ A+ + +E E+W G+ Sbjct: 378 QNPR-LLSSGRQNASFYSAMWKAINTTGVWEGEIWNRRKNGEIYPEHLTVTAVKDRNGMV 436 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVY 271 + +D+T+ + A+E++ LA D +T LPNR + D + A+ A + V++ Sbjct: 437 TNYVGVLSDLTQRKAAEEKIENLAFFDPLTKLPNRRLLLDRLKQAMASATRSVTNGAVLF 496 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS--- 328 +DLDNFK +ND YGH GD LL+ V+ ++S + ++R GGDEF+VL ++ Sbjct: 497 IDLDNFKALNDTYGHPMGDLLLQQVAKRLVSSVRDGDTVSRFGGDEFVVLLEGFDENPLD 556 Query: 329 ---ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAK 385 E + +I LR P+ IG E + + S+G L + +++ AD AMY AK Sbjct: 557 AASQAETVGEQIFAALRQPYLIGTHEYHGTSSIGATLFNDKQQSIDELMKQADIAMYQAK 616 Query: 386 EGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRW 445 + GR F P+M + + + L+ +LRKA+EN Q +HYQ ++ EAL+RW Sbjct: 617 KEGRNVLRFFDPQMQETIAKRTALEGDLRKAIENHQFQLHYQIQVDESRHPFGAEALIRW 676 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR--DKGINLRVAVNISARQ 503 PE G++ P FI AEES LI+P+G WV+ ++ +W+ K ++VN+SA+Q Sbjct: 677 FHPEHGMVSPDQFIPLAEESDLILPIGYWVLETACARIQRWQHDAKTSGFVLSVNVSAKQ 736 Query: 504 LADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFG 563 ++ ++Q+ + +ELTES L++N E ++ + +LG + LDDFG Sbjct: 737 FRQTDFVNQVQSLIQQYEINPSLLKLELTESMLLDNIEDTIATMSALKELGVKFSLDDFG 796 Query: 564 TGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAK 623 TGYSSL L R P+D +K+DQ FVRDI +++VR I+A+A +L+L VIAEGVE+ + Sbjct: 797 TGYSSLQYLKRLPLDQLKIDQSFVRDIAVDASDRAIVRTIIAMAHSLDLDVIAEGVETEE 856 Query: 624 EDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 + L+ G QG+LF KP+P FE ++ L Sbjct: 857 QQKHLSSKGCKNFQGYLFGKPVPIEQFETSLRKSL 891 Score = 67.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 41/141 (29%), Gaps = 3/141 (2%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD--V 151 L + + A + + + + F++ + G EH+ Sbjct: 65 QTMKQNFLTEEKLHDSEERWKFALEGAGDGVWDWNPQTDEAFFSKRWNEIIGYTEHEFPA 124 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH-SGSG 210 G + + S Y+VE I G ++ + Sbjct: 125 TGSAWVAHLHPDDKDRVLSVIQGYLTDSREIYDVEYRIRCKDGSWKWILARGMLVSRDVY 184 Query: 211 KNEIFLICSGTDITEERRAQE 231 + +I + +DIT+ + +E Sbjct: 185 GKPLRMIGTHSDITQRKVDEE 205 Score = 63.0 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 29/237 (12%), Positives = 66/237 (27%), Gaps = 18/237 (7%) Query: 12 NFLGSHNPYWRLTESSDVLRF---STTETTEPDRTLQLSAEQAARIREMTVITSSLMMSL 68 S + + + PD ++ + + + I Sbjct: 104 EAFFSKRWNEIIGYTEHEFPATGSAWVAHLHPDDKDRVLSVIQGYLTDSREIYDVEYRIR 163 Query: 69 TVDESDLSVHLVGRKINKREWAG--NASAWHDTPAVARDLSH----GLSFAEQVVSEAHS 122 D S + G +++ + H + L +++ Sbjct: 164 CKDGSWKWILARGMLVSRDVYGKPLRMIGTHSDITQRKVDEELVLKNLEKWKKLFDILPI 223 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVI-G--QSVFKLFMSR-REAAASRRNNRVFFR 178 + I++S+ I FN E G+ + ++ G + L A + R Sbjct: 224 GVSIVNSKNGIVDFNPSLEAILGISKEGLLQGDYDNWEYLRTDNTHMDADEFPSLRAIKE 283 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVH-SGSGKNEIFLICSGTDITEERRAQERLR 234 +V + + G ++ + S TDIT+ ++ + LR Sbjct: 284 QRVVKDVVIGVKKESGDIIWTSVSAAPLSYDSNSCVT----VTTDITKRKQFESELR 336 >UniRef50_C1DBY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=3 Tax=Neisseriaceae RepID=C1DBY5_LARHH Length = 839 Score = 910 bits (2354), Expect = 0.0, Method: Composition-based stats. Identities = 193/646 (29%), Positives = 316/646 (48%), Gaps = 13/646 (2%) Query: 18 NPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSV 77 +P + + + + +L AE+ R +T + L + Sbjct: 196 DPDQPVGRLASRPLVTAKASASLYYARKLLAEKHIRHLGITSENNQLTG-------LVGF 248 Query: 78 HLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFN 137 + I A + L A++V I+I D+ G I+ N Sbjct: 249 ADIMASIEHEYVHELQYALKERDEALNLSQQNLRLADKVFEATLEGIIITDAEGIIETVN 308 Query: 138 RLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRL 197 TG + +V+G++ L S ++ R+ R ++ E+ G+ Sbjct: 309 PAFTRITGWRREEVVGKNPRILSSS-QQPPEFYRHLWQSLREHGFWQGEVINRRKDGKFY 367 Query: 198 FLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDH 257 G +DIT+ + +ERL LAN D +T LPNR + + + Sbjct: 368 TEHLTITGIRGPDGTFTHYAGIFSDITQRKLNEERLHYLANHDPLTDLPNRTLLMERLGA 427 Query: 258 AINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGG 315 A+ A +V +++LDLD FK +ND GH GD+LL+ V+ + L +AR GG Sbjct: 428 ALTRAHRQGKRVALMFLDLDRFKFINDTLGHAVGDKLLQTVASRLTGSLRASDTVARLGG 487 Query: 316 DEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAII 374 DEF ++ + + A +++ R++ + +VY + SVGIA+ P+ GS + Sbjct: 488 DEFNIVLEDIRDLRGVAQTAQKLIDRVQGMVTLDGHDVYVTASVGIAIYPDDGSTPEVLR 547 Query: 375 RHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-R 433 +ADTAMY AKE G+ F FT +MN L L++NL +AL + +H+QPK+ Sbjct: 548 MNADTAMYRAKERGKNNFQFFTADMNASTLARLRLESNLHRALARQEFQLHFQPKVDLAH 607 Query: 434 GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-N 492 G + +EAL+RW+S E G + P DFI AEES LI +G WV+ RQ W + G+ Sbjct: 608 GHIYGMEALLRWRSHELGPVSPADFIPIAEESNLISTIGEWVLEQACRQARHWLNLGLLP 667 Query: 493 LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQ 552 VAVN+S++Q+ I ++++L+ N +++E+TES ++N + ++ Sbjct: 668 GTVAVNLSSKQMTQGDIVATVRRILEHSNLPGHYLELEITESVAMDNTGEMIRTLKNLKA 727 Query: 553 LGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNL 612 LG ++ +DDFGTGYSSLS L + PID +K+D+ FV D+H+ ++ AI+++ Q+LNL Sbjct: 728 LGVRIAIDDFGTGYSSLSYLKQLPIDVLKIDRSFVTDLHEDRDDAAIASAIISMGQSLNL 787 Query: 613 QVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 Q +AEGVE + FL +G QG+LF++P+PA E+ Sbjct: 788 QPVAEGVEREEHRQFLLDHGCQYGQGYLFSRPVPAATMEQLLLESQ 833 >UniRef50_C5S5K8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S5K8_CHRVI Length = 1069 Score = 910 bits (2354), Expect = 0.0, Method: Composition-based stats. Identities = 206/578 (35%), Positives = 310/578 (53%), Gaps = 7/578 (1%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 +RE + L A V ++I D G I NR + + Sbjct: 487 TERELIDECACIAGLAVTRVRADTRLRQAATVFESTREGVIITDLEGRILDVNRAFTEIS 546 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G E +V+G++ L +R++ A + ++ ++ E+W G+ Sbjct: 547 GYSEPEVLGRNPSLLRSNRQDHA-FYQAMWHSLKTTGHWQGEIWNRRKSGELYPQILTIN 605 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN 264 + S + TDI++ ++++ RL L + D +T LPNR +Q ++HA+ AD Sbjct: 606 TVADSQGRPSHYVGVMTDISQLKQSEARLEHLVHYDPLTNLPNRRLVQSRLEHALERADR 665 Query: 265 N--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 +V V+++DLD FK VND+ GH GD LL ++ + + D LAR GGDEFLVL Sbjct: 666 QGGRVAVLFVDLDRFKTVNDSLGHPSGDVLLELLARRLSERVREDDTLARLGGDEFLVLL 725 Query: 323 SNT-SQSALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 N A+A +L+ L+ PF + E+Y S+GI+L P+ G T +I+HAD A Sbjct: 726 ENLQRPEDAAAVAESLLSLLQQPFHLPNGQELYVGASIGISLYPDDGHTVTDLIQHADVA 785 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSL 439 MY AKE GR + +TP + Q E L L+ L +AL +++ V+HYQ +I R G + Sbjct: 786 MYQAKEEGRNTYRFYTPSLTQTARERLGLEARLHRALASEEFVLHYQAQIDMRDGRLIGC 845 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVN 498 EALVRW S GL+ P FI AEE+GLIVPLG WV+ WR +G+ +L VAVN Sbjct: 846 EALVRWHSATEGLVAPDRFIPLAEETGLIVPLGEWVLRQACADCQSWRARGLTDLTVAVN 905 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 +S RQL + + +VL+E + +ELTES +++ E AL ++ LG ++ Sbjct: 906 LSGRQLRSPDLVERVTRVLRETGLPAERLKLELTESMIMDQREQALERLRALKALGVRLS 965 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 +DDFGTGYSSL+ L R PID +K+D+ FVRDI + + I+A+A+ L L VIAEG Sbjct: 966 IDDFGTGYSSLAYLKRLPIDELKIDRDFVRDIPEDSSDMEIAATIIAMARNLRLNVIAEG 1025 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 VE+ ++ FL + G QG+LF +P+PA AF + + Sbjct: 1026 VETPEQCDFLIRQGCTAGQGYLFGRPLPAEAFAQVMRA 1063 >UniRef50_A1K4Z0 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=2 Tax=Rhodocyclaceae RepID=A1K4Z0_AZOSB Length = 880 Score = 910 bits (2353), Expect = 0.0, Method: Composition-based stats. Identities = 210/641 (32%), Positives = 331/641 (51%), Gaps = 7/641 (1%) Query: 26 SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKIN 85 + D+L T E + Q A R T +++L + L + ++ + Sbjct: 233 TRDILALPTGARAESVIHAYVDGYQHATDRAHTYRVLLFVVALGLAG-YLMIAILRLQRT 291 Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 AG + R L V + A + I D++ I N D TG Sbjct: 292 SLALAGANEHLEERIQTLRLTESELHLYANVFTNASEGMAITDAQARIVAVNPAFTDITG 351 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 ++ G++ L R++AA R ++ E+W G+ + + Sbjct: 352 YSIEEIHGRTPAVLASGRQDAA-FYREMWATLGKRGQWQGEIWNRRRSGEIYPEWLSITA 410 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN 265 + I +DIT+ + ++ R+R LA+ D++TGLPNR +QD + AI A N Sbjct: 411 ITEGDGGVSHYIGIFSDITDRKESEARIRHLAHHDALTGLPNRLLLQDRLGQAILKARRN 470 Query: 266 --KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 + V++LDLD FK +ND GH GD LLR V+ L + +AR GGDEF+++ Sbjct: 471 STQAAVLFLDLDRFKTINDTLGHEIGDGLLRQVTQRCLGAVRETDTVARQGGDEFVIVLP 530 Query: 324 NTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 + +A +IL L P R+G E+ + S+GIAL P G+D + ++R+AD AMY Sbjct: 531 DLEHGQDAGTIARKILAALTEPCRLGPHELTVTGSIGIALYPGDGADPSMLLRNADAAMY 590 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEA 441 AK GR F + +MN L L+ LR AL+ ++L +++QPK+ G + EA Sbjct: 591 RAKADGRNGFQFYAADMNTHSLGELLLEHQLRGALDRNELRLYFQPKVNAADGCIEGCEA 650 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNIS 500 L+RWQ P+ GL+ P F+ AEESGLIVP+G WV+ + RQ+ W D G+ + VAVN+S Sbjct: 651 LLRWQHPDLGLLAPGRFVPAAEESGLIVPIGEWVLREACRQLRAWIDAGLAPVPVAVNLS 710 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 +Q A Q I +++ L E +++ELTE+ L+ + E ++ + + +G + +D Sbjct: 711 GQQFAHQDIVALVREALAEHRLPAPMLELELTETMLMRDLERTIATLAELRAMGVTLAID 770 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFGTGYSSL+ L +F ++A+K+D+ FV DI + A++A+A L L V AEGVE Sbjct: 771 DFGTGYSSLAYLRQFDVNALKIDRSFVHDIRPGSSDGKIATAVIALAHNLGLTVTAEGVE 830 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 +A + FL ++G ++ QGFLF +P PA AF + +RA Sbjct: 831 TAAQQHFLARHGCDQLQGFLFGQPEPAEAFAQRLADDDRRA 871 >UniRef50_A0LKD9 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKD9_SYNFM Length = 844 Score = 907 bits (2345), Expect = 0.0, Method: Composition-based stats. Identities = 207/654 (31%), Positives = 320/654 (48%), Gaps = 14/654 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + + S L +R L+ S EQ + Sbjct: 185 INRRLCEMLGFQERELIESSFPDL-CVPENRDVHERELKKSVEQGLEYHGFEIPL----- 238 Query: 67 SLTVDESDLSVHLVGRKINKR-EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + D + L + + ++ L + V + AI+ Sbjct: 239 -VHKDGRIIWTKLTLSPMKDAAGVPKYFIHIVEDITERKNFEDNLRLSATVFEGSTEAII 297 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I D+R NI R N TG +H+V+G++ L R S ++ Sbjct: 298 ITDARANILRVNSAFTAMTGYADHEVVGKNPRLLKSGNHH-EEFYRAMWATLSSTGQWQG 356 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+W G + S + DIT + A+ERL A+ D++TGL Sbjct: 357 EIWNRRKNGDIFPAWLTLCAVRNSEDKITNYVGISRDITLRKEAEERLSYQASHDALTGL 416 Query: 246 PNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR D + HA+ A D ++ +++LDLD FK +ND GH GD LL+ V+ +L Sbjct: 417 PNRARFHDRLTHALARAGRDRHEFAILFLDLDRFKVINDTLGHTVGDFLLQGVTKRLLGG 476 Query: 304 LEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 LAR GGDEF++L + A RIL L PF + EV+ S S+GI++ Sbjct: 477 TRESDTLARWGGDEFIILLESIRGAEDAAVAARRILDVLAEPFSVQGHEVFVSGSIGISV 536 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 P G D A++R AD AMY AK+ G+ + + M+ E L L+ +LR AL+ ++ Sbjct: 537 YPRDGEDVQALLRCADIAMYRAKDSGKNDYQFYESTMSTGGLERLKLEGDLRYALKRNEF 596 Query: 423 VIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 V+HYQP++ G + EAL+RW P+RGL+ PLDFI AEESG I+P+G WV+ Sbjct: 597 VLHYQPRVNINTGLIVGAEALIRWDLPDRGLLWPLDFIPLAEESGFIIPIGEWVLRTACL 656 Query: 482 QVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Q KW+D G+ RV+VN+S Q + + + ++L+E +++E+TES ++EN Sbjct: 657 QCRKWQDAGVPHPRVSVNLSTHQFKKDNLTSTVDRILKETGLSPGLLELEITESAMMENL 716 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 E A++ +Q ++LG V +DDFGTGYSSL L RFPI A+K+DQ FVR I ++ Sbjct: 717 EKAVATLQGLAELGVNVAIDDFGTGYSSLGYLKRFPIGALKIDQSFVRHIPSNIDDTAIA 776 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 +I+++ + LNL+V+AEGVE+ ++ L +E QG+LF++P+ A + Sbjct: 777 MSIISLGKTLNLKVVAEGVETQEQLTVLRNYQCDEAQGYLFSQPVDADRMTEFL 830 Score = 104 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 5/198 (2%) Query: 39 EPDRTLQLSAEQAARIREMTVITSSLM-MSLTVDESDLSVHLVGRKINKREWAGNASAWH 97 E R + + +R + S ++ ++ + +I+ Sbjct: 89 ESTRHIPVIIVTGGALRHNEAVQKSFAAGAVDFVTKPINEVELFMRIHSALALYRERVIR 148 Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 R+L +A I +++ G + NR + G +E ++I S Sbjct: 149 HHKT--RELRESEEKFRVTFDQAPVGIAHVNADGRLLLINRRLCEMLGFQERELIESSFP 206 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEV-ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 L + R + G Y E+ + G+ ++ + + Sbjct: 207 DLCVPENRD-VHERELKKSVEQGLEYHGFEIPLVHKDGRIIWTKLTLSPMKDAAGVPKYF 265 Query: 217 ICSGTDITEERRAQERLR 234 I DITE + ++ LR Sbjct: 266 IHIVEDITERKNFEDNLR 283 >UniRef50_A1K3A1 GGEF/EAL/PAS/PAC-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K3A1_AZOSB Length = 818 Score = 906 bits (2344), Expect = 0.0, Method: Composition-based stats. Identities = 202/650 (31%), Positives = 312/650 (48%), Gaps = 16/650 (2%) Query: 13 FLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDE 72 L P + + + + AA + + L + V Sbjct: 176 RLFGQAPGCVPSYELFLSVVHPEDQALVE---------AAWRQAVARGDYDLTHRVIVGG 226 Query: 73 SDLSVHLVGRKINKREWAGNA-SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 VH + A A + L A V ++I D++ Sbjct: 227 EVRWVHERAEFRRAADGAALAGIGTVQDITDRKLAEQSLRQAATVFENTGEGVIIADAKN 286 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 I NR TG +VIG+S L R +AA ++ E+W Sbjct: 287 RIIAVNRAFTVITGYGPEEVIGRSPNLLRSGRHDAA-YYDAMWRGVHEAGHWQGEIWNRR 345 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G+ V + +DI+ + + RL+ LA+ D++T LPNR + Sbjct: 346 KNGEIFPELLTLSVVRDHNGKVSHYVGVFSDISRMKETEARLQRLAHYDALTDLPNRVLL 405 Query: 252 QDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 + H + + + V++LD+D FK VND+ GH GD+LL +++ + S + + Sbjct: 406 NLRLAHGVERVQRSGEMLAVLFLDIDRFKNVNDSLGHPVGDELLIEIARRLRSRIRAEDT 465 Query: 310 LARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHG 367 LAR GGDEF++L S + + A I+ L F++ EV+ S+GI+L P Sbjct: 466 LARLGGDEFVILLDRIRSANDVADFAQEIIDLLNQSFQLASGQEVFVGASIGISLYPLDT 525 Query: 368 SDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQ 427 D+T +I +AD A+Y AKE GR + +T ++ + E L L+ LR+ LE + V+H+Q Sbjct: 526 DDATQLISNADAALYQAKEAGRNVYRFYTADLTRAAHERLGLEAALRRGLERGEFVLHFQ 585 Query: 428 PKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW 486 P + GEV EALVRW P G+I PL FI AEE+GLIVPLG WV+ RQ +W Sbjct: 586 PVVALDKGEVVGAEALVRWNHPTEGMIAPLRFIPLAEETGLIVPLGEWVLESACRQGREW 645 Query: 487 RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSV 546 D G L +AVN+S RQ + ++ +L F +++E+TES ++E+ + A++ Sbjct: 646 LDCGRPLTIAVNLSTRQFRAGDLTATVRDILDRTGFPAALLELEITESTVMEDADRAVAT 705 Query: 547 IQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAV 606 + LG ++ +DDFGTGYSSL+ L RF +DA+K+D+ FVRDI + +V +VA+ Sbjct: 706 LAALKGLGVRLSIDDFGTGYSSLAYLKRFAVDALKIDRSFVRDIADDENDRMIVATVVAM 765 Query: 607 AQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 A + L VIAEGVE+A++ AFL G QG+L +P A F +R Sbjct: 766 AHQMRLGVIAEGVETAEQLAFLRSLGCEAYQGYLVGRPQAAADFLGAVER 815 Score = 79.9 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 1/125 (0%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 S ++ + D G NR E YTG +E ++IG + LF A + R Sbjct: 19 SLLRALIDVIPDLVFFKDEAGRYLGCNRAFEAYTGRREAELIGYTDRDLF-DLSTADSYR 77 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 + SG + E WI G+R+ + K + ++ D+T R Sbjct: 78 GYDNAVLASGRSSRNEEWIVYPDGRRVLVDTLKTPFRDAASGRRGVVGISRDVTVFRETA 137 Query: 231 ERLRI 235 E LR Sbjct: 138 EALRR 142 >UniRef50_C7RJ77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ77_9PROT Length = 1399 Score = 906 bits (2344), Expect = 0.0, Method: Composition-based stats. Identities = 199/666 (29%), Positives = 335/666 (50%), Gaps = 18/666 (2%) Query: 8 TTLYNFLGSHNPYWRLTESSDVL----RFSTTETTEPDRTLQLSAEQ-----AARIREMT 58 + + + + + + L R L E AR R Sbjct: 737 NPGAEAIFGYAAHEVVGKVTPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSG 796 Query: 59 VITSSLMMSLTVDESDLSVHLVGRKINKRE--WAGNASAWHDTPAVARDLSHGLSFAEQV 116 + + D +++ L + + AG D + + L+ A +V Sbjct: 797 QVDERETAGVRKDGRRITIRLAVTVMRDAQGALAGYLGTIVD-ITAQKQAAAQLNLAAKV 855 Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 + I I D+ NI N+ TG E +V+G++ L R + A ++ Sbjct: 856 FEQGGEGIAITDAACNIVMINQAFTRITGYSEVEVLGRNPSLLASGRHDQA-FYQSMWES 914 Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 S ++ E+W G + I + DIT+ + A+ ++ L Sbjct: 915 IESLGHWQGEIWNRRKDGSVYPEWLLISRV-DGDGAPTHYIGTFIDITQHKEAEASIQRL 973 Query: 237 ANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLR 294 A+ D++TGLPNR+ +++ + H + A + + ++++DLD FK VND+ GH GD LL Sbjct: 974 AHFDALTGLPNRSLLEERVRHDLARAHRGREALALMFVDLDRFKNVNDSLGHRVGDALLI 1033 Query: 295 DVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYT 354 V+ + + + ++R GGDEF+V+ +T +A+++L + +RI E+ Sbjct: 1034 QVAERLRRAVRDEDTVSRLGGDEFIVVLPSTDADGAAHVAAKLLEVMAPAYRIEQHELTC 1093 Query: 355 SCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLR 414 S S GIA+ P G A+ ADTAMY AK+ GR +C FT EM +R L ++ +LR Sbjct: 1094 SLSAGIAMYPADGESFEALSMSADTAMYRAKQSGRNAYCFFTAEMQERSARNLQIENDLR 1153 Query: 415 KALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGR 473 +ALEN +L +HYQP+ T + EAL+RWQ P+ G++ P++FI AEE GLI+P+G Sbjct: 1154 RALENGELRLHYQPQFTLADRRLVGAEALLRWQHPQLGMVSPVEFIPIAEECGLILPIGE 1213 Query: 474 WVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELT 532 WV+ V Q+ W+ +G+ + VAVN+SA Q ++ + ++L +++ELT Sbjct: 1214 WVLRAAVSQLRVWQQEGLPPMTVAVNLSAVQFRQASLTDVVSRILDAEGLAAQFLELELT 1273 Query: 533 ESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHK 592 ES ++N A++ + + LG ++ +DDFGTGYSS+S L RF + +K+D+ FV D+ Sbjct: 1274 ESVAMDNPLAAIATMDKLRALGVRMSIDDFGTGYSSMSYLKRFRVHKLKIDRSFVADLAA 1333 Query: 593 QPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 P +++V A +++A+ L LQ IAEGVES + AFL G +E QG+LF++P+ F Sbjct: 1334 DPEDEAIVTATISLARDLGLQTIAEGVESEAQLAFLRAKGCDEAQGYLFSRPLAPAQFAA 1393 Query: 653 WYKRYL 658 + + + Sbjct: 1394 FVRAHA 1399 Score = 92.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 16/153 (10%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 N++ + V + L + V++ A IV D +G I FN E G H+ Sbjct: 691 ENSALLAERRQVEQALRESEALKASVLASAACGIVATDPQGLITVFNPGAEAIFGYAAHE 750 Query: 151 VIGQSVFKLFM----------------SRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 V+G+ L+ R A SG E E G Sbjct: 751 VVGKVTPTLWHDAEEIAAAAVALSRDLGCRVEAGFDALVARARCSGQVDERETAGVRKDG 810 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEER 227 +R+ + V + + + DIT ++ Sbjct: 811 RRITIRLAVTVMRDAQGALAGYLGTIVDITAQK 843 Score = 58.4 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 61/235 (25%), Gaps = 16/235 (6%) Query: 13 FLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQ-----AARIREMTVITSS---- 63 LG Y L + + + + +RE S Sbjct: 306 ELGLDGRYHDCHTPRADLLAAPPDALIGRLLTDVLPAAAAATCLSALREAQATGHSAGQQ 365 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 + L + + + + + L A Sbjct: 366 FELPLRGGNFWFELSVARKPTGVGREPRFVV-LARDISERKRAEARLRMAT---EATQLV 421 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS--VFKLFMSRREAAASRRNNRVFFRSGN 181 LD + R++ GL + G + + +L AA + + Sbjct: 422 FWELDLLSDQLRYDTSMLQVLGLDHGEDPGSTGALMELVHPDHRAALTESFRAAMASAEP 481 Query: 182 AYEVELWIPTCKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + E I T G+ ++L + + + + +IT+ +RA+ L Sbjct: 482 VFSFEHQIVTHSGEGVWLQTRGRVAQRDAAGRAVLAVGTAMNITDRKRAEAALLR 536 Score = 55.7 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 4/137 (2%) Query: 99 TPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 + R + + E + + L G + D +IG+ + Sbjct: 279 VVTLRRLVRQRTATLEATLDAIPDPLFELGLDGRYHDCHTPRADLLAAPPDALIGRLLTD 338 Query: 159 LFMSRREAAASRRNNRVFFRSGNA-YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 + + A +A + EL + G + + E + Sbjct: 339 VLPAAAAATCLSALREAQATGHSAGQQFELPLR---GGNFWFELSVARKPTGVGREPRFV 395 Query: 218 CSGTDITEERRAQERLR 234 DI+E +RA+ RLR Sbjct: 396 VLARDISERKRAEARLR 412 >UniRef50_C6P1A0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1A0_9PROT Length = 1011 Score = 906 bits (2343), Expect = 0.0, Method: Composition-based stats. Identities = 199/684 (29%), Positives = 320/684 (46%), Gaps = 34/684 (4%) Query: 4 VRESTTLYNFLGSHNPY---------WRLTESSDVLRFSTTETTEPDRTLQL-------- 46 ++ES + P + + L T E R +L Sbjct: 330 LQESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAMLEAATLEEARQKKLIDYVAPED 389 Query: 47 -SAEQAARIREMTVITSSLMMSLTVDE---SDLSVHLVGRKINKREWAGNASAWHDTPAV 102 +A A R M ++ L +T + L H + Sbjct: 390 QAAFLALHRRVMNGESAVLEFKITGLKGTLHHLETHATPMPDANGNIS-LLLGITRDVTA 448 Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + L A + +++ D+ G I R N+ TG +VIG++ L Sbjct: 449 SMHAKQQLRIAATAFE-SQEGMLVTDAVGAILRVNQAFTRITGYTADEVIGKNPRILNSG 507 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 R + A + + +E E+W G +G N + + + D Sbjct: 508 RHD-AYFYKEMWERIKRTGEWEGEIWNRRKNGDVYPEHLTITAVKDAGGNVVNYVATLMD 566 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKV 280 IT + ++E +R LA D +T LPNR +QD + A+ + ++++DLDNFK + Sbjct: 567 ITASKASEEEIRNLAFFDPLTRLPNRRLLQDRLQQALASCGRSGKSGAILFIDLDNFKNL 626 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ------SALEAMA 334 ND GH GD LL V++ + SC+ +AR GGDEF+V+ + S E++ Sbjct: 627 NDTLGHDIGDLLLEKVAIRLSSCVREGDTVARIGGDEFVVMLEDLSDNILDAAEQTESVG 686 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 S+IL L +P+++G+ S S+G L ++ + +++ AD AMY AK+ GR Sbjct: 687 SKILASLNVPYQLGIHTYDNSPSIGATLFNDNHNSIDELLKQADIAMYQAKKAGRNTMRF 746 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIP 454 F P M Q + L L+ LRKA+E DQ ++YQ ++ EAL+RW PE GL+ Sbjct: 747 FDPRMQQSLSARLALELELRKAIEKDQFQLYYQIQVDETHRPLGAEALLRWMHPEHGLMA 806 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTA 512 P +FI AEE+GLIVP+G WV+ Q+ W + NL +++N+SA+Q Sbjct: 807 PAEFIPMAEETGLIVPIGWWVLETACTQLKAWEKDPLTRNLVLSINVSAKQFHQPDFVDQ 866 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 ++ + + + +ELTES L+EN + + + + G LDDFGTGYSSL L Sbjct: 867 VQAAVDHYGIDPALLKLELTESILLENVDTTIKRMSALKKTGVGFSLDDFGTGYSSLQYL 926 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 R P+D +K+DQ F+++I ++V I+A+AQ++ + VIAEGVE+ ++ L + G Sbjct: 927 KRLPLDQLKIDQSFMQEITSDSSDMAIVSTIIAMAQSMQMGVIAEGVETEEQRQLLLRKG 986 Query: 633 INERQGFLFAKPMPAVAFERWYKR 656 N QG+LF+KP+P FE+ R Sbjct: 987 CNHFQGYLFSKPVPVEQFEKLLHR 1010 Score = 59.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 3/139 (2%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG-LKEHDVIGQS 155 A + DL + I ++D G + N+ + + Sbjct: 321 QRLQATSNDLQESEKRLRTIFETEPECIKVVDRNGELVEMNQAGLAMLEAATLEEARQKK 380 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 + +AA + RV E ++ G L + + N Sbjct: 381 LIDYVAPEDQAAFLALHRRVMNGESAVLEFKITGLK--GTLHHLETHATPMPDANGNISL 438 Query: 216 LICSGTDITEERRAQERLR 234 L+ D+T A+++LR Sbjct: 439 LLGITRDVTASMHAKQQLR 457 >UniRef50_C6P464 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P464_9PROT Length = 1347 Score = 905 bits (2340), Expect = 0.0, Method: Composition-based stats. Identities = 197/645 (30%), Positives = 325/645 (50%), Gaps = 8/645 (1%) Query: 22 RLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVG 81 L S++ L TE P++ + Q A + SS + D S + Sbjct: 703 MLGYSNEELLQLGTEDIHPEQDKEYYIAQFAMMVRGESTLSSNAVVKRKDGSVFYADIKA 762 Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCE 141 + + + + L V +H+ I+I D G+I N+ Sbjct: 763 SPLRIGDKV-YLMGFFRDITERKQTEDALRQGAAVFESSHNGIIITDLDGHILAANQAYA 821 Query: 142 DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 D +G E +++GQ+ L R+ + R + +++ ELW G+ + Sbjct: 822 DISGYTESELLGQNPRILNSGRQ-SRDFYRKMWANIKEAGSWQGELWNRRKNGEIYPTWL 880 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH 261 + +D+++ R+ + LA+ D +T LPNR ++ + HA+ Sbjct: 881 AVSAVRNDQGKATHYVGISSDLSQLRQTEAEREHLAHYDPLTDLPNRLLLRSHLTHALAQ 940 Query: 262 ADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL 319 A + +VGV+YLDLD FK +ND+ G+ GD+LL ++ + + + +LAR GGDEFL Sbjct: 941 AKRHHNQVGVLYLDLDRFKNINDSLGYQVGDELLVTLTERLTMHMRSEDLLARLGGDEFL 1000 Query: 320 VLASNTSQSALEA-MASRILTRLRLPFRIGL-IEVYTSCSVGIALSPEHGSDSTAIIRHA 377 ++ + ++ A +A +L L PF + E++ S+GI++ P G + +I+HA Sbjct: 1001 LVLEHINEPEDSAIVARSLLETLAQPFVLHGEREIFIGASIGISIFPNDGDSAEQLIQHA 1060 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEV 436 D AM+ AK GR + +T ++++ E+L L+ LR A+ +QL ++YQP++ G + Sbjct: 1061 DAAMHQAKTLGRNTYHFYTEDLSRASNEHLELENRLRHAITANQLRVYYQPQVDIATGHI 1120 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRV 495 EALVRWQ PERGL+ P FI AEE+GLI +G WV+ + Q +W D G+ L + Sbjct: 1121 IGAEALVRWQDPERGLVQPGQFIPLAEETGLIGAIGEWVLKETCLQGMRWIDAGLPFLTL 1180 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 AVN+S Q I + +VL E F +++ELTES L++ E + ++ Sbjct: 1181 AVNLSPHQFLRGNIAGLISKVLAETGFPADRLELELTESALMQQGEDVIKMLHLLRAQDI 1240 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 ++ +DDFGTGYSSLS L RFP+D +K+D+ FV DI + I+A+ L +V+ Sbjct: 1241 RLAIDDFGTGYSSLSYLKRFPLDILKIDKSFVDDIPFHQDDMEIAATIIAMGHILGFKVL 1300 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 AEGVE+ ++ FL G + QG+L + P+PA FE+ K + R Sbjct: 1301 AEGVETREQLEFLQARGCDLYQGYLTSPPIPAEEFEKLLKENMAR 1345 Score = 90.3 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 43/152 (28%), Gaps = 8/152 (5%) Query: 91 GNASAWHDTPAVARDLSHGLS----FAEQVVSEAHSAIVILDSRGN-IQRFNRLCEDYTG 145 G + + L + + A I++ DS N G Sbjct: 646 GEFVVVSEDITERKQAETALRDSEDRFRSIFNNAIDGILLADSGTRKFIMGNSAIARMLG 705 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 +++ + ++ + R + + G + Sbjct: 706 YSNEELLQLGTEDI-HPEQDKEYYIAQFAMMVRGESTLSSNAVVKRKDGSVFYADIKASP 764 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILA 237 ++++L+ DITE ++ ++ LR A Sbjct: 765 LR--IGDKVYLMGFFRDITERKQTEDALRQGA 794 Score = 75.3 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 19/169 (11%), Positives = 46/169 (27%), Gaps = 13/169 (7%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAH-SAIVILDSRG-NIQRFNRLCEDYTGLKE 148 H R ++ + + I N D G Sbjct: 397 RQQQRLHRMELANRSSEQDKQL--KLFYDLPFIGMAITSPATKRWVYANDRLCDMLGYSR 454 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 D++ + L A + R+ + + +E G + + + Sbjct: 455 DDLLKTAWIDLTHPDDVAGNLKEFERMVAGETDGFNIEKRFIRKDGSPITVNLDVKCTRR 514 Query: 209 SGKNEIFLICSGTDITEERRAQERLR-ILANTDSITGLPNRNAMQDLID 256 + ++ DIT+ ++ + LR A R+ ++++ Sbjct: 515 ADGKPDLIVALVDDITQRKQTELALRAKEATY--------RSLFDNMLN 555 Score = 65.3 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 76/228 (33%), Gaps = 25/228 (10%) Query: 22 RLTESSD-VLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLV 80 L S D +L+ + + T PD E + T + + D S ++V+L Sbjct: 449 MLGYSRDDLLKTAWIDLTHPDDVAGNLKEFERMVAGETDGFNIEKRFIRKDGSPITVNLD 508 Query: 81 GRKINKREWAGN-ASAWHDTPAVARDLSHGLS----FAEQVVSEAHSAI----VILD--- 128 + + + + A D + L + + + +I Sbjct: 509 VKCTRRADGKPDLIVALVDDITQRKQTELALRAKEATYRSLFDNMLNGVAHYRMIFRDGA 568 Query: 129 -SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS-RREAAASRRNNRVFFRSGNAYEVE 186 N TGLK DV+G+ V ++ S + ++G A E Sbjct: 569 PVDYEFIAVNPAFGKTTGLK--DVVGRKVSEVIPGYCEANQDSLQVFGKVAQTGEACHWE 626 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 ++ L + + ++S + + DITE ++A+ LR Sbjct: 627 HYL-----SALGKWFSFSIYSPAPGE---FVVVSEDITERKQAETALR 666 >UniRef50_C6NZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZ79_9PROT Length = 923 Score = 901 bits (2331), Expect = 0.0, Method: Composition-based stats. Identities = 190/602 (31%), Positives = 311/602 (51%), Gaps = 6/602 (0%) Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 + + V+ V A + L A +V + Sbjct: 321 DIEHRILVNGEIRWVREKANLDFDAHGNAVYAIGTVRDITRYKQEEATLRLAARVFDSSG 380 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 AI+I D + N +G + +V+G++ L R + A R Sbjct: 381 EAILITDENVRVVAVNHSFVAMSGYRSEEVMGKNPRMLSSGRHD-AEFYRAMWDDINQHG 439 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 ++ E+W G+ + + + I D TE+ A++ + LA D Sbjct: 440 YWQGEIWDKHKSGRIYPKWMSITAVRDEHGKVVNYISIARDTTEQTEAEKNIHFLAYYDV 499 Query: 242 ITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +TGLPNR ++D + I A ++ +++LDLD FK +ND+ GH GD+LL+ V+L Sbjct: 500 LTGLPNRTLLRDRLGQMIAVAHRDKHQFSLIFLDLDRFKYINDSMGHSVGDRLLQSVALR 559 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 I C+ +AR GGDEF+VL +SA +A ++L L P+ + + T S+G Sbjct: 560 IQDCVREGDTVARLGGDEFIVLLREAGESAASVVAQKLLIALATPYDLDGQVISTQASIG 619 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 I++ P+ D+ +I++AD AMY AKE GR F F PEMN RV ++ +LR ALE Sbjct: 620 ISIYPDQAQDADTLIKNADMAMYRAKEEGRNNFQFFVPEMNFRVDLLFSMEKDLRLALER 679 Query: 420 DQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 +L + YQP+ G + +EAL+RW P +G + P +FI AEE+G IV +G WV+ Sbjct: 680 GELFLQYQPQADLASGTLSGVEALIRWDHPVKGQVSPAEFIPVAEETGQIVAIGEWVLRT 739 Query: 479 VVRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 Q+A+WR G +L +AVN+S RQL + +K VL E + +++E+TE ++ Sbjct: 740 ACSQMAEWRKTGMHDLTIAVNLSIRQLRQPDLAELIKSVLLETGLDARHLELEITEGIMM 799 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 +++ A + + LG Q+ +DDFGTG+SSL+ L + P++ +K+DQ F+RDI Sbjct: 800 GDNQAAFRFLSEMQDLGVQLSIDDFGTGFSSLNYLKQMPVNKLKIDQSFIRDIETDEGDA 859 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 +++R+I+++ LNL+VIAEGVE+ ++ FL G +E QG+ +++P+ A F R+ K Sbjct: 860 AIIRSIISLGHRLNLRVIAEGVETQEQLDFLRIRGCDEIQGYFYSRPLLAEDFMRFVKAP 919 Query: 658 LK 659 + Sbjct: 920 PR 921 >UniRef50_C6NZE4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZE4_9PROT Length = 727 Score = 895 bits (2315), Expect = 0.0, Method: Composition-based stats. Identities = 194/655 (29%), Positives = 317/655 (48%), Gaps = 28/655 (4%) Query: 19 PYWRLTESSD-------VLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVD 71 P + E++ +L + L+L + I + V + LT Sbjct: 83 PCELIGETAGRESDQAALLSALRCTQMQYKSYLRLPIDHCGVIVLLAVEIPKTSLPLTTM 142 Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 + H A + R L E V ++S ++I D++G Sbjct: 143 LQPVLAH----------LAKAIVLCRNNDVHTRGLIDQRDLLETVFESSYSGVMITDAKG 192 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 NI N TG + +V G++ L R + R +G +E E+W Sbjct: 193 NIVEVNPAFTRITGYQSEEVQGRNPHLLASGRHDHTFYREMWDDILANG-HWEGEIWDRR 251 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G+ + N N ++ + +D+T+ + A+ ++ LA D +T LPNR + Sbjct: 252 KNGEVYPSWMNINPVRDISGNLLYYVGIFSDVTKRKEAEAQIHQLAFYDPLTELPNRRLL 311 Query: 252 QDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 + + A + + V++LDLDNFK +ND GH GDQLL +V+ + SC+ + Sbjct: 312 NERLQQAFSVGARSGHHGAVLFLDLDNFKTLNDTKGHDIGDQLLIEVAKRLNSCVRNGDT 371 Query: 310 LARPGGDEFLVLASNTS------QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 +AR GGDEF+V+ + S + + +A +I L P+++ T+ S+G+ + Sbjct: 372 VARLGGDEFVVVLESLSSVPDEAATQADLVAEKIRYALSQPYQLANHVHRTTPSIGVVMF 431 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 H +++ ADTAMY AK GR + P M + L+ LR+ +E +QL Sbjct: 432 RGHQQSLEEVLKFADTAMYQAKTAGRNAIRFYDPVMQASIEARAELEEELRQVVERNQLR 491 Query: 424 IHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQV 483 ++YQ ++ E L+RWQ PERGL+ P FI AEE+G IVP+G WV+ Q+ Sbjct: 492 LYYQVQMDSSNRPLGAEVLLRWQHPERGLVSPAQFIPMAEETGHIVPIGLWVLQTACTQL 551 Query: 484 AKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 W+ + +L +AVN+SA+Q + +++ L + + + +ELTES ++EN E Sbjct: 552 KVWQSDPLTCDLTLAVNVSAKQFRSMDFVSQVQRTLAQSGAKPSLLKLELTESLVLENVE 611 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 ++ +++ LG +DDFGTGYSSL L R P+D IK+DQ FVRDI ++V+ Sbjct: 612 DTIAKMRELKLLGVSFSMDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDAAIVQ 671 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 I+A+++ L L VIAEGVE+ + FL G + QG+LF +P P FE ++ Sbjct: 672 TIIAMSEVLGLNVIAEGVETEAQREFLDLRGCHAFQGYLFGRPAPLAEFEAILRK 726 >UniRef50_C5V1H2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1H2_9PROT Length = 1134 Score = 895 bits (2314), Expect = 0.0, Method: Composition-based stats. Identities = 194/666 (29%), Positives = 318/666 (47%), Gaps = 29/666 (4%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQA----ARIREMTVIT 61 + + + P L + + R + L+ + + R++T Sbjct: 478 YVSNRSIEVKGYTPEQLLGHAPAE-FMPPEDIDMAARIVNLAISKNQPFKLQHRDITPSG 536 Query: 62 SSLMMSLTVDES-DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 + L ++ D + HL+G + R G + L A Sbjct: 537 AILWEEVSGVPFYDDAGHLLGLRGTGRNITG-----------RKLKEEQLRVAAAAFE-T 584 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 H AI+I D+ G I + N+ + TG + +V+G++ L + R + + Sbjct: 585 HEAIMITDAHGTIIKVNQAFQRITGYSQEEVLGENPRIL-SAGRNEKSFYSAMWQQLTTL 643 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 + E+W GQ + + +DIT+ + A+E +R LA D Sbjct: 644 GRWRGEIWDKRKSGQIYPKWMTITAVRDENGKTTEYVAIFSDITQRKLAEEEIRNLAFYD 703 Query: 241 SITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSL 298 ++T LPNR + D + A++ + ++ V++LD+D FK +ND GH +GD LL +V+ Sbjct: 704 ALTRLPNRRLLLDRLHAALSVSARSRRFGAVLFLDMDRFKTLNDTMGHDYGDLLLIEVAE 763 Query: 299 AILSCLEHDQVLARPGGDEFLVLASNTSQS------ALEAMASRILTRLRLPFRIGLIEV 352 I C+ +AR GGDEF++L + A+A +I + L +P+R+ Sbjct: 764 RIKLCVREIDTVARLGGDEFVILVEEIDTRAEETSKHIAAIAEKIRSALSVPYRLKEKHH 823 Query: 353 YTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTN 412 ++S S+G+ L + +++HAD AMY AK+ GR F P M Q V + L+ + Sbjct: 824 HSSPSIGVCLYRGIEESTDDLLKHADMAMYQAKDSGRNAVRFFDPLMQQAVEARVTLEND 883 Query: 413 LRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLG 472 LR AL NDQL ++YQ ++ EALVRW P RG++ P FI AEE+ LI+ +G Sbjct: 884 LRHALPNDQLQLYYQIQVDNDRRAIGAEALVRWIHPIRGMVSPAHFIPIAEETSLILEVG 943 Query: 473 RWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVE 530 WV+ Q+A W D+ + NL +AVN+S +Q + ++++ + +E Sbjct: 944 AWVLKTACLQLAVWADRPMTCNLILAVNVSVQQFKQVGFVEHIAELIRAYCIVPQRLKLE 1003 Query: 531 LTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI 590 LTES ++ + + + LG ++ +DDFGTGYSSLS L P+D +K+DQ FVR+I Sbjct: 1004 LTESVVLNDVSDIVQKMCALKSLGVRLSMDDFGTGYSSLSYLKNLPLDQLKIDQSFVRNI 1063 Query: 591 HKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 +V+ I+A+AQ L VIAEGVE+ + AFL +NG QG+ F KP P F Sbjct: 1064 ATDENDAVMVKTIIAMAQNFRLNVIAEGVETEAQLAFLKQNGCMCYQGYYFGKPAPIEQF 1123 Query: 651 ERWYKR 656 + + Sbjct: 1124 QSQLEA 1129 Score = 97.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 17/159 (10%), Positives = 45/159 (28%), Gaps = 4/159 (2%) Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF 136 + ++N + + L + A I+ ++ + I Sbjct: 297 LVSAAPQLNPNNEVEQVVCTFVDITERKKMEERLELTQFASDYAPDCILWVNEQARICYA 356 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR 196 N G + +++ ++ L + + +E G Sbjct: 357 NEAALHCHGFSKEELLSMTIHDL--DPDFPPDVWLAHWHELQHKGGITIETRHRRRDGSI 414 Query: 197 LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + + ++ + I DITE ++++ LR Sbjct: 415 FPIEVSANFVK--FGDKEYNIAYHRDITERKKSEAALRY 451 Score = 89.6 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 26/226 (11%), Positives = 58/226 (25%), Gaps = 19/226 (8%) Query: 15 GSHNPYWRLTESSDVLR--FSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDE 72 + L+ + L F LQ R S + ++ + Sbjct: 364 HGFSKEELLSMTIHDLDPDFPPDVWLAHWHELQHKGGITIETRHRRRDGSIFPIEVSANF 423 Query: 73 SDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLS----FAEQVVSEAHSAIVILD 128 A+H + L V + + +D Sbjct: 424 VKFGDK------------EYNIAYHRDITERKKSEAALRYSEQRLRDVSEASGEYLWEID 471 Query: 129 SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW 188 + + G ++G + + A R + ++++ Sbjct: 472 INLGYTYVSNRSIEVKGYTPEQLLGHAPAEFMPPEDIDMA-ARIVNLAISKNQPFKLQHR 530 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 T G L+ + + + L +G +IT + +E+LR Sbjct: 531 DITPSGAILWEEVSGVPFYDDAGHLLGLRGTGRNITGRKLKEEQLR 576 Score = 87.6 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 5/132 (3%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 + + + + + G N + E G E ++G++ + R +A + Sbjct: 73 EARLRTLFNTIKDLVWLKAPDGVYLACNPVVERMLGTAEAAIVGRTDYDFIS-REQADSF 131 Query: 170 RRNNRVFFRSGNAYEVELWIPTCK-GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 R ++R +G E W+ G +K I + DITE +R Sbjct: 132 REHDRAAMNTGTVCINEGWLTFKDTGYCGLFETSKTPVYDDTGQLIGVFGIARDITERKR 191 Query: 229 AQERL---RILA 237 A+ L A Sbjct: 192 AEAALKNSEQQA 203 Score = 76.5 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 28/237 (11%), Positives = 64/237 (27%), Gaps = 13/237 (5%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + + + + + E + R +A + + Sbjct: 99 CNPVVERMLGTAEAAIVGRTDYDFI--SREQADSFREHDRAAMNTGTVCINEGWLTFKDT 156 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 + G A + L + A ++ + +++ Sbjct: 157 GYCGLFETSKTPVYDDTGQLIGVFGIARDITERKRAEAALKNSEQQARNLIDKLQVGVLL 216 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQS-----VFKLFMSRREAAASRRNNRVFFRS-- 179 +R I N++ D GL E ++G+S + S V + Sbjct: 217 QSARAEILLCNQIALDLLGLSEAQLLGKSSFDPDWNVIHEDGSPFPGSEHPVPVSIATKS 276 Query: 180 --GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + R++L + ++C+ DITE ++ +ERL Sbjct: 277 LVHDVVMGVYRPSKRD--RVWLLVSAAPQLNPNNEVEQVVCTFVDITERKKMEERLE 331 >UniRef50_Q47GC0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Betaproteobacteria RepID=Q47GC0_DECAR Length = 862 Score = 894 bits (2311), Expect = 0.0, Method: Composition-based stats. Identities = 199/633 (31%), Positives = 307/633 (48%), Gaps = 22/633 (3%) Query: 31 RFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWA 90 + P Q A AR ++ + S V L + Sbjct: 202 YNAARGEYGPGDPEQQVAAIIARTKKFVPHKIERVRPDGTSLSIRGVPLA---------S 252 Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 G + + + L A + + ++I D+ IQR NR + TG + Sbjct: 253 GGFLSIYTDITDRKQSEEQLRIAAAAFE-SQTCMIITDANRVIQRVNRAFIETTGYSAEE 311 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 +GQ+ L R A R A++ E+W G+ + + G+ Sbjct: 312 AVGQTPRLLQSGRH-GADFYREMWETIHRTGAWQGEIWGRRKNGEVYPKWLSISAVVGTN 370 Query: 211 KNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVG 268 I + DITE ++A+ER+ LA D +TGLPNR + D + I + + Sbjct: 371 GRVSHYIGTHNDITERKKAEERINALAFFDQLTGLPNRTLLLDRLKQTILSSGRSDSHGA 430 Query: 269 VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-- 326 ++++DLDNFK +ND GH GDQLL+ V+L + C+ +AR GGDEF+V+ +N + Sbjct: 431 LLFIDLDNFKTLNDTLGHDVGDQLLKQVALRLTHCVRDGDTVARLGGDEFVVVLANLNTN 490 Query: 327 ----QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 E +A +IL L +++G + ++S S+G L +++ AD +MY Sbjct: 491 DKEAAQDTETVAEKILATLNQTYQLGHVTHHSSASIGATLFKGPLIPIDDLMKQADLSMY 550 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEAL 442 AK GR F P M V ++ +L +AL Q ++HYQ ++ + E L Sbjct: 551 KAKAAGRNAVRFFDPSMEIAVKVRAEMEDDLLRALAEKQFLLHYQAQMVGE-RLTGAEVL 609 Query: 443 VRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNIS 500 +RWQ P+RG++ P +FI AEE+GLI+PLG WV+ Q+A+W R + +L +AVN+S Sbjct: 610 LRWQHPQRGMVSPAEFIPLAEETGLILPLGHWVLETACTQLAQWAGRPEVAHLTLAVNVS 669 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 A Q + VL++ + +ELTES L+EN E + + G LD Sbjct: 670 AHQFRQNDFVDQVLGVLEKTGANPQRLKLELTESLLVENVEDIIDKMAALKHRGVGFSLD 729 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFGTGYSSLS L R P+D +K+DQ FVRD+ S+ R IVA+A +L L VIAEGVE Sbjct: 730 DFGTGYSSLSYLKRLPLDHLKIDQSFVRDVLTDSNDASIARTIVALANSLGLGVIAEGVE 789 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 + + FL +G + QG+ F++P+P FE + Sbjct: 790 TEAQRDFLASSGCHTYQGYYFSRPLPIEDFESF 822 Score = 92.3 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 5/141 (3%) Query: 99 TPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 + + L + A++I D+ G I N+ E G +++G+S+ Sbjct: 9 VIRLEQALRTSEARLHSFFDATPDALLISDAHGTITMANQQVEKLLGYVAAELVGKSIED 68 Query: 159 LFMSRREA--AASRRNNRVFFRSGNAYEVE-LWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 L +R +A R R+ + G + + +F Sbjct: 69 LVPNRFKASHPVLRSEFTASPRARRMGNGMAVKARRKDGSECDVDVSLSRIETDEG--MF 126 Query: 216 LICSGTDITEERRAQERLRIL 236 + DI+E +R +E LR Sbjct: 127 FASALRDISERKRKEEELRRQ 147 Score = 83.0 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 36/255 (14%), Positives = 71/255 (27%), Gaps = 46/255 (18%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 T+ + L + + +S + L + + + P L +E A R + Sbjct: 42 TITMANQQVEKLLGYVAAELVGKSIEDLVPNRFKASHPV----LRSEFTASPRARRMGNG 97 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF----AEQVVS 118 + + D S+ V + +I E ASA D + + L + Sbjct: 98 MAVKARRKDGSECDVDVSLSRIETDEGMFFASALRD-ISERKRKEEELRRQNGVLSTIFQ 156 Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 I + D+ + FN + L LF + R Sbjct: 157 SFPGGITLFDADLRLVAFNDQFKALLDL---------PDVLF--EQPEPDFETLIRYNAA 205 Query: 179 SGNAYEVE-------------------LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 G + + G + + + Sbjct: 206 RGEYGPGDPEQQVAAIIARTKKFVPHKIERVRPDGT----SLSIRGVPLASG---GFLSI 258 Query: 220 GTDITEERRAQERLR 234 TDIT+ ++++E+LR Sbjct: 259 YTDITDRKQSEEQLR 273 >UniRef50_C6ME82 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME82_9PROT Length = 1136 Score = 893 bits (2310), Expect = 0.0, Method: Composition-based stats. Identities = 197/561 (35%), Positives = 302/561 (53%), Gaps = 7/561 (1%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 + L A V +VI D + I NR + TG E V+G++ + R + Sbjct: 562 AAESLKQAAAVFESTREGVVITDLQPRIVAINRAYAEITGYSEEQVLGKNPRIIKSGRHD 621 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 + + E+W G + + TDIT+ Sbjct: 622 -KLFYQAMWASLTKAGYWRGEVWNRRRSGDIYPQWLTISTVFNDRNEPCNYVGVFTDITQ 680 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH--ADNNKVGVVYLDLDNFKKVNDA 283 ++++ RL LA+ D++TGLPNR +Q + HAI N++ +YLDLD FK VND+ Sbjct: 681 IKQSEARLAHLAHYDALTGLPNRLLVQSRLHHAIERTLRHGNQIAALYLDLDRFKNVNDS 740 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLR 342 GH GD+LL ++L + L + LAR GGDEFLV+ + + +A ++ L Sbjct: 741 LGHPIGDELLVMLALRLKKRLREEDTLARLGGDEFLVVLEDIKDSNEPAMVAQTLIDLLA 800 Query: 343 LPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 PF + E++ + S+GI+L P + T +I+HAD AMY AK+ GR + T ++ Sbjct: 801 TPFSLPSGHEIFINTSIGISLFPTDANSVTELIQHADMAMYLAKQEGRNTYRYHTDALSI 860 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFIS 460 E L L+T LR+AL + V+HYQP I R G+V +EALVRWQ P++ ++ P FI Sbjct: 861 AANERLVLETQLRQALSAGEFVLHYQPLIDARKGQVMGVEALVRWQPPDKAMVSPGKFIP 920 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQE 519 AEE+GLIVPLG WV+ Q W D L +AVN+S RQ + + ++QVL+E Sbjct: 921 IAEETGLIVPLGEWVLRTACAQGRAWMDADFPPLVMAVNLSVRQFQSENLVELIRQVLEE 980 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 +++ELTES +E+ E ++ +++ LG ++ +DDFGTGYSSL+ L RFPID Sbjct: 981 TKLPAACLELELTESMFMEHAEQSIEILKTLKSLGVRLSIDDFGTGYSSLTYLKRFPIDK 1040 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+DQ FV + P + + I+A+A+ L L V+AEGVES ++ L ++G + QG+ Sbjct: 1041 LKIDQSFVHGLAYDPNDREIAATIIAMARNLKLDVLAEGVESEQQLDILNQHGCDYYQGY 1100 Query: 640 LFAKPMPAVAFERWYKRYLKR 660 LF +P+PA E W++ + Sbjct: 1101 LFHRPVPAQELEVWFRENKRN 1121 Score = 59.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 21/187 (11%), Positives = 66/187 (35%), Gaps = 19/187 (10%) Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQ------------ 115 +T S+++V +A ++T A+ + H A + Sbjct: 220 VTDQGSEIAVARALHMGVDDYLTKHAGYLYETTAILEKVQHQAELARERISLKKTSLRLS 279 Query: 116 -VVSEAHSAIV---ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 +++ + + + ++ + + + E G + +V+ + + L + + A+ Sbjct: 280 DLLAASPTILYNLRVVGTTFQLVWVSENIERLLGYTQEEVMAEGWWNLHVHPDDREAALT 339 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 + G + + GQ +++ + + ++ + D++E +R + Sbjct: 340 HQSELLAVGQL-TYDYRLLHRNGQSVWIHDELRLVRSINGKPLEVVGAWLDVSEHKRTE- 397 Query: 232 RLRILAN 238 L A+ Sbjct: 398 -LIRQAH 403 >UniRef50_Q5P5U6 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P5U6_AZOSE Length = 740 Score = 893 bits (2310), Expect = 0.0, Method: Composition-based stats. Identities = 196/658 (29%), Positives = 324/658 (49%), Gaps = 10/658 (1%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 + E L + + + ++ +E R+ + + + Sbjct: 88 VILEINLTGARLLGQDRAQVIGMPLSGWVPNGAVAQLFHHLRRVLSE-PGRVFDHLPLHT 146 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 SL+ + L + + R D + L+ QV + Sbjct: 147 SLVRESPIRHVRLESIAFTQYGSGRLCRTALVDLSD----RKREEDRLNLIAQVFERSTD 202 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 AI+I DS I NR TG +V+G++ L R + R + Sbjct: 203 AIMITDSLNRIVSVNRAFTTVTGYSADEVLGRNPKLLASGRHD-RDFYREMWSAIERNGS 261 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 + E+ G+ + I +IT++R A R++ LA+ D + Sbjct: 262 WSGEISNRRKNGEIYNEWLTIHAVRNESGGIENCIAIYAEITDQRAAASRIQFLAHYDPL 321 Query: 243 TGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 T LPNR +QD + + HA + V++LDLD FK +ND+ GHL GD LL++V+ + Sbjct: 322 TLLPNRALLQDRMHQGLAHAAREGTRAAVLFLDLDRFKTINDSLGHLVGDHLLQEVAQRL 381 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 + + D +AR GGDEF+V+ + +A +I+ + + + S S+G Sbjct: 382 KASVREDDTVARRGGDEFIVMLPHVDSAEQAAHVAGKIIEAMEQTIPVNGYVLNVSFSIG 441 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 I++ P+ D +IR+AD AMY +K GR QF FT +MN E L L+ +L +A+E Sbjct: 442 ISVFPDDAMDPDTLIRNADIAMYRSKASGRNQFQFFTADMNAHALERLALENDLHRAVER 501 Query: 420 DQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 + + +QP+ G + EAL+RWQ P+RGL+ P +FI AEE+GLIVP+G WV+ Sbjct: 502 GEFRLMFQPQFEGSGSIIGAEALLRWQHPQRGLVTPAEFIPVAEETGLIVPIGTWVLERA 561 Query: 480 VRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 +QV WRD G+ + V+VNISA Q + + + ++++L N E +++ELTES L+ Sbjct: 562 CQQVRAWRDAGLKKITVSVNISALQFSQKNLLELIRRLLAVSNIEPGTLELELTESVLMH 621 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 + ++ + ++G ++ +DDFGTGYSSLS L FPI +K+DQ FVRD+ + + Sbjct: 622 DHVATSGLMSELKEMGVRMAIDDFGTGYSSLSYLRSFPISKLKIDQSFVRDLSDGGDAGA 681 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 + AI+ +A+ LN++VIAEGVE+A++ +FL +E QG F++P+ F + Sbjct: 682 ITGAIIGLAKNLNMRVIAEGVETAQQASFLQAQCCDEFQGHFFSQPVSPEKFAELLRA 739 Score = 59.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 58/194 (29%), Gaps = 13/194 (6%) Query: 47 SAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDL 106 S E ARIRE+ +L D S + ++++ E + R L Sbjct: 11 SDELIARIRELEARLGALRA-----APDTSSLVEELRVHQIELEAQN---RELIEARRAL 62 Query: 107 SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 + A + LD G I N G VIG + + A Sbjct: 63 EDARDRYSDLYDFAPVGYMTLDEHGVILEINLTGARLLGQDRAQVIGMPLSGWVPNGAVA 122 Query: 167 AASRRNNRVFFRSGNAYE---VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 RV G ++ + + R + D+ Sbjct: 123 QLFHHLRRVLSEPGRVFDHLPLHTSLVRESPIRHVRLESIAFTQYGSGRLCRTALV--DL 180 Query: 224 TEERRAQERLRILA 237 ++ +R ++RL ++A Sbjct: 181 SDRKREEDRLNLIA 194 >UniRef50_C3X2S2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Oxalobacter formigenes RepID=C3X2S2_OXAFO Length = 1049 Score = 893 bits (2309), Expect = 0.0, Method: Composition-based stats. Identities = 179/578 (30%), Positives = 302/578 (52%), Gaps = 6/578 (1%) Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCE 141 + ++R D + L + Q+ +++ I++LD +I N Sbjct: 466 TESSQRLLLELVEDI-DFALEHFEKEEQLQLSAQIFAQSSEGIMLLDPNCHIVMVNSAFT 524 Query: 142 DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 TG E + +G++ L S + + ++ E+W G + Sbjct: 525 HITGYSEEETLGRNPKML-ASGQHDRNFYATMWEAIETEGRWQGEVWNRRKDGSLYPEWL 583 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH 261 S I + TD+TE + +ER++ LA+ D +TGLPNR + + AI+ Sbjct: 584 LIQTMRDSRGTLTHYIGTFTDLTERKETEERVQWLAHFDPLTGLPNRTLLHIRSNLAISL 643 Query: 262 ADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL 319 A + +++LDLDNFK VND+ GH GD+LL+ S +++ + ++R GGDEF+ Sbjct: 644 AQRRHEPLALMFLDLDNFKNVNDSLGHGVGDELLKQFSQRLVNAVREQDTISRLGGDEFV 703 Query: 320 VLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADT 379 ++ T +A R+L + I E+ + S+GIA+ P G+D + R AD Sbjct: 704 LVLPGTDTDGAAYLAERLLNIAARQYNIERHEINLTVSIGIAMYPTDGTDFDTLWRSADA 763 Query: 380 AMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRS 438 AMY AK+ GR +C FT EM R L +D LR+ALE +Q + YQP+++ + Sbjct: 764 AMYRAKQSGRNDYCFFTTEMQARSARTLQIDNALRRALERNQFSLVYQPQLSLNTNRIVG 823 Query: 439 LEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAV 497 EAL+RW P+ G PP +FI AE +G I+P+G WV+ VRQ+ W+D G+ ++ ++V Sbjct: 824 FEALIRWTHPQFGNTPPDEFIPIAESNGQIIPIGEWVLKTAVRQLRLWQDNGLKDVTISV 883 Query: 498 NISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQV 557 N+SA Q + + +L+E + +ELTE +EN A++VI + + G ++ Sbjct: 884 NLSAVQFRHPRLPELVMAILEEAGVSPECLQLELTEGVAMENPLAAITVIDELRKKGIRI 943 Query: 558 HLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAE 617 +DDFGTGYSSL+ L RF + ++K+D+ FV+D+ ++V A++++A +L + +AE Sbjct: 944 SIDDFGTGYSSLTYLKRFNVYSLKIDRSFVQDLPNDTEDMAIVSAVISLADSLGMITVAE 1003 Query: 618 GVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 GVE+ ++ FL G E QG+ ++P+ A A + + Sbjct: 1004 GVETKEQLEFLRSRGCTEIQGYYLSRPLQADAVFSFIE 1041 Score = 64.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 17/144 (11%) Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN- 181 I+ + FN + G + + +L A + G+ Sbjct: 2 GILSVSLD-KWIHFNDKLCEIFGYTPEEFGKKGWNEL---CDTPCAEENRGIESLKRGDI 57 Query: 182 -AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN-T 239 + E G+ + + +L+ + DITE ++AQ + L+ Sbjct: 58 DEFREEKAFRRKNGRNAIAEVHFRCVAKDDGAPDYLVVTVEDITERKKAQTEIYRLSQLY 117 Query: 240 DSITGLPNRNAMQDLIDHAINHAD 263 ++ + AI H+ Sbjct: 118 ATL----------SHCNQAIVHSK 131 >UniRef50_C6P3H6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H6_9PROT Length = 837 Score = 892 bits (2307), Expect = 0.0, Method: Composition-based stats. Identities = 191/607 (31%), Positives = 294/607 (48%), Gaps = 12/607 (1%) Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 M L L + + K + + + + + L A H AI Sbjct: 233 MQRLAGYTLTLWLVVKTAKTIEGKTLLSNRLLKQQIEDRKQAENQLRIAATAFE-THEAI 291 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 +I D+ NI R N+ ++ TG DVIG++ L R+ + + SG ++ Sbjct: 292 MITDAHANIIRVNQAFQNITGYSPEDVIGKNPRVLSSGRQGSEFYAAMWKRLLGSG-SWT 350 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ + + + +DIT + A+E + LA DS+T Sbjct: 351 GEIWDKRKNGEVYPKWLTITAVKDNEGVTTEYVAIFSDITLRKHAEEEIYTLAFYDSLTK 410 Query: 245 LPNRNAMQDLIDHA--INHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR + D I+ A I+ N+ +++LD+D FK +ND GH +GD L +VS + + Sbjct: 411 LPNRRHLLDRINQARSISARSNHYGALLFLDMDRFKILNDTLGHDYGDLFLVEVSRRMRN 470 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQSA------LEAMASRILTRLRLPFRIGLIEVYTSC 356 C+ +AR GGDEF+VL + +A +I L P+ + E ++S Sbjct: 471 CVRDMDTVARIGGDEFVVLIEEIGTDNEEVSTKVALIAEKIRAALTEPYLLKDKEHHSSP 530 Query: 357 SVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKA 416 S+G+ L + ++RHAD AMY AKE GR F P M V L+ ++R A Sbjct: 531 SIGVCLYLGNEESVDTLLRHADLAMYQAKESGRNGVRFFDPAMQLAVETRAALEADMRHA 590 Query: 417 LENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVI 476 + QL ++YQ ++T EAL+RW P RGL+ P FI AEES LI+ +G WV+ Sbjct: 591 VTGKQLRLYYQIQLTSDHRPLGAEALIRWMHPVRGLVSPAQFIPIAEESSLILEIGHWVL 650 Query: 477 LDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTES 534 +Q+ W ++ NL +A+N+SA+Q + +L + +ELTES Sbjct: 651 ETACKQLVLWSKHERTRNLILAINVSAQQFNKHDFVDTVSTLLHLHQLNPNRLKLELTES 710 Query: 535 CLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQP 594 ++ + +S + LG ++ LDDFGTGYSSLS L + P+D IK+D+ FV D+ P Sbjct: 711 VVLSDVADVVSKMHALKALGVKLALDDFGTGYSSLSYLKQLPLDQIKIDRSFVSDVTTDP 770 Query: 595 VSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 +V+ I+ +A + VIAEGVE+ + FL +NG QGFLF KPMP FE Sbjct: 771 SDAVMVQTIINLAHNFRMNVIAEGVETEDQLNFLKQNGCMAYQGFLFGKPMPIDEFEALL 830 Query: 655 KRYLKRA 661 + A Sbjct: 831 GQTQTLA 837 >UniRef50_Q47IA0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IA0_DECAR Length = 925 Score = 891 bits (2305), Expect = 0.0, Method: Composition-based stats. Identities = 184/565 (32%), Positives = 301/565 (53%), Gaps = 6/565 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + + L V S ++ AI++ D+ I N TG + DVIG++ Sbjct: 335 QDISERKRTEAHLQLMAMVFSNSNEAIIVTDASNRIIATNPAFTCLTGYQPDDVIGKNPR 394 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L + A++ ELW G+ + + + I Sbjct: 395 ILSAGTTPTEVFS-DMWTCLHREGAWQGELWDRKKNGEAYPKWLSISLVRDEDGQIRNHI 453 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLD 275 S DI+E + QER+R LA+ D++T L NR ++ + + A+ N ++ ++ +DLD Sbjct: 454 GSFIDISELKATQERIRHLAHHDTLTNLANRFSLHEKLAQALAFCKRNRMQLALMLIDLD 513 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMA 334 FK +ND GH GD+LL V+ + + ++AR GGDEF++ +A Sbjct: 514 RFKTINDTLGHQAGDELLVQVAKRLSHAVRESDIVARLGGDEFVIALPGIGSPADAAHLA 573 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 I + P+ I E+ TS S+GI + P GS+ ++++AD AMY AK GRG + Sbjct: 574 DDITREISAPYLIKGQELRTSPSIGICVYPGDGSEIGDLLKNADVAMYHAKANGRGNYQF 633 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 FT +MN E + L+++LR A+ + ++HYQP++ G + +EAL+RWQ P RGL+ Sbjct: 634 FTEDMNIATTERMCLESDLRLAITRREFLLHYQPQLDLRSGTIVGVEALIRWQHPTRGLV 693 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTA 512 P DFI AEESG+I +G WV+ + RQ+ W+++GI +LR+++N+SA Q D+T+ Sbjct: 694 SPADFIPIAEESGMIAAIGDWVLEEACRQLKVWQNRGITHLRMSINLSAGQFLDKTLPAR 753 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + ++L + +D+E+TES + + + ++SV++ S G + +DDFGTGYSSL+ L Sbjct: 754 IHELLAANDLSADRLDLEVTESMSMASPDESISVMKTLSSSGLTLSIDDFGTGYSSLAYL 813 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 PI +K+D+ FV+DI P + V +A L L+V+AEGVE+ + FL G Sbjct: 814 KLLPIHTLKIDRSFVKDIESDPNDADICDVTVLLAHKLGLEVVAEGVETEAQLKFLLSIG 873 Query: 633 INERQGFLFAKPMPAVAFERWYKRY 657 + QG+L +KP+PA ER+ + Sbjct: 874 CEKVQGYLISKPLPADQAERFIRNN 898 Score = 113 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 60/231 (25%), Gaps = 10/231 (4%) Query: 12 NFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVD 71 L + L ++ S E T P ++ A I + + Sbjct: 126 QELSGYASSEILGKT----GVSWEEITHPQDRGRVRACIEDAIGSGQRFAVQYRI-VCKS 180 Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVAR----DLSHGLSFAEQVVSEAHSAIVIL 127 V G I + + +V R L + A I Sbjct: 181 GQVKWVIERGVAIRDELDESVIEGFIEDISVRRTTLEALEAAEQRYRNIFEHASEGIFQS 240 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY-EVE 186 G+ N G + + + R A E Sbjct: 241 TRDGHYLAANPALAKLYGYDNAQALMTDLADIERRLYVQPNRREEFLTLIEKNGAILNFE 300 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + G R+++ N V G I + DI+E +R + L+++A Sbjct: 301 SEVYRRDGSRIWISENAHVVFGPQGEFICYEGTVQDISERKRTEAHLQLMA 351 Score = 57.6 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 3/109 (2%) Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQS--VFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 D+ + + C++ +G +++G++ ++ ++ R SG + V Sbjct: 113 DADWTMVFVSDGCQELSGYASSEILGKTGVSWEEITHPQDRGRVRACIEDAIGSGQRFAV 172 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + I GQ ++ + + DI+ R E L Sbjct: 173 QYRIVCKSGQVKWVIERGVAIRDELDESV-IEGFIEDISVRRTTLEALE 220 >UniRef50_C6P6N2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6N2_9PROT Length = 1043 Score = 891 bits (2304), Expect = 0.0, Method: Composition-based stats. Identities = 192/664 (28%), Positives = 312/664 (46%), Gaps = 13/664 (1%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 + + P + + A + + Sbjct: 381 NTTFVNAAAADMLGYTPEELFDKPMHATI--HHSYPDGTHYPAERCPMHATLVDGKPRMG 438 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 + D S+L V I A + + R L A V ++ Sbjct: 439 IDEVLWRKDGSELYVDYSSHPIRSHGEMEGAVVVFEDISERRQKDEALKLASSVYQSSND 498 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 I++ D + I N TG DV G+ + +A ++ + G Sbjct: 499 GILVTDEKNRILDVNPAFTRITGYTLEDVRGKDPGIFQSGKHDAQFYQQMWQSILDDG-H 557 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 ++ E+W G+ + + V + + + +DITE++R E + AN D++ Sbjct: 558 WQGEIWDLKKNGELHAKWLSISVIRRADGSIYRHVGQFSDITEKKRKDELIWEQANFDTL 617 Query: 243 TGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 T LPNR D AI+ ++ LDLD FK++ND +GH GD+LL +V+ + Sbjct: 618 TNLPNRRLFADRFRQAISAGARSGRYGALLSLDLDQFKRLNDTFGHSMGDKLLIEVARRL 677 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQSA------LEAMASRILTRLRLPFRIGLIEVYT 354 SC+ + +AR GGDEFLV+ + E +A +I L P+++ E ++ Sbjct: 678 TSCVREEDTVARMGGDEFLVILNGLGSEQNEAAIRAELIAEKIRNELCRPYQLDKTEHHS 737 Query: 355 SCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLR 414 S S+GI L H D ++ H DTAMY +K GR C F M + + + L+T LR Sbjct: 738 SSSIGIVLFRGHSDDPERLLAHVDTAMYQSKAKGRNAICFFDSSMQEILEKRGQLETALR 797 Query: 415 KALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRW 474 ALE + ++HYQ ++ G EAL+RW + + G + P+ FI AEESGLI+P+G W Sbjct: 798 GALERKEFLLHYQLQMDSSGRPIGAEALLRWNNAKLGSVSPVQFIPVAEESGLILPIGHW 857 Query: 475 VILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELT 532 V+ Q+A+W+ L +AVN+SA Q + ++ VLQ+ + + +ELT Sbjct: 858 VLETACAQLARWQSDPRFNRLCIAVNVSAIQFREAAFVAKVRNVLQQSGIQPWLLKLELT 917 Query: 533 ESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHK 592 ES ++++ ++ ++ LG + +DDFGTGYSSLS L+R P+D +K+DQ FVRDI Sbjct: 918 ESLVLDDINDSILKMEALKNLGVKFSMDDFGTGYSSLSYLSRLPLDQLKIDQSFVRDITT 977 Query: 593 QPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 ++V+ I+++A +L ++VIAEGVE+ ++ FL G QG+L+AKPMP E Sbjct: 978 DQHDAAIVQTIISMALSLGMEVIAEGVETEEQREFLDLRGCQAYQGYLYAKPMPIEELEI 1037 Query: 653 WYKR 656 + Sbjct: 1038 KLAQ 1041 Score = 86.1 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 67/248 (27%), Gaps = 23/248 (9%) Query: 7 STTLYNFLGSHNPYWRLTE-SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI----- 60 + N L + LR + + R + E I+ +T + Sbjct: 243 TDAKVNRLAAQQRLELYGRTDFPELRITPWQEMADVRLRHIGNEDYPHIQAVTDLPEYGL 302 Query: 61 -------TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA 113 +L + L S+ + + + + ++ Sbjct: 303 EIHSEADLPNLPLLLNQRRSNFLLLWLLGSVTLLTVVSLTFYFRSIRQSRSAVAASEQRL 362 Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ----SVFKLFMSRREAAAS 169 ++ + I LD GN N D G ++ + ++ + A Sbjct: 363 RLILGSVSNGIWGLDKDGNTTFVNAAAADMLGYTPEELFDKPMHATIHHSYPDGTHYPAE 422 Query: 170 RRNNRVFFRSGNAYEV--E-LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEE 226 R G E LW G L++ + S + DI+E Sbjct: 423 RCPMHATLVDGKPRMGIDEVLW--RKDGSELYVDYSSHPIR-SHGEMEGAVVVFEDISER 479 Query: 227 RRAQERLR 234 R+ E L+ Sbjct: 480 RQKDEALK 487 >UniRef50_Q1NQ51 PAS:GGDEF:EAL n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQ51_9DELT Length = 751 Score = 891 bits (2303), Expect = 0.0, Method: Composition-based stats. Identities = 211/656 (32%), Positives = 331/656 (50%), Gaps = 16/656 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + L + P + + S DR +SAEQ I + + Sbjct: 103 YVSPQVKTLLGYRPDEVIGRTPFDFMPSGEAERVRDRFAAISAEQ-------EAIINLVN 155 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNAS-AWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 +L + + G + V + L L + V Sbjct: 156 TNLHRQGRRVILETSGVPFYDQHGTWQGYRGIDRDITVRQQLEEWLRQSAMVYENMWEGA 215 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 VI D G I N TG + +VIG++ L R E A + R G + Sbjct: 216 VITDPAGTILDVNPAFSRITGYAKDEVIGKNPRILKSDRHEQAFYQHMWRELIEKGQ-WR 274 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ + + S + + + TD+++ ++++ +L LA D +T Sbjct: 275 GEIWNRRKNGEVYPEWLSISGVSDARGQTSYYVGVFTDLSQLKQSEAKLESLAYYDPLTA 334 Query: 245 LPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR + ++HA+ A+ ++ VGV ++DLD F+ VN++ + GDQLL VS LS Sbjct: 335 LPNRLLLHSRLEHALEWAERHQTKVGVYFIDLDQFRVVNESLSYQAGDQLLVMVSKRFLS 394 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGL-IEVYTSCSVGI 360 CL D LARPGGDEF+++ + A +L L PF++ E+Y S+GI Sbjct: 395 CLRVDDTLARPGGDEFVLIQEALADPQEATETARELLASLDQPFQLDGGQEIYLGASIGI 454 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 + P G+ ++++A+ AMY AKE GR +F + +MN L ++ LR+A+EN Sbjct: 455 TVFPGDGTTPPDLLKNAEAAMYHAKENGRNRFSFYAEQMNADALARLQMEMALRQAVENR 514 Query: 421 QLVIHYQPKITWRGE--VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 +L+++YQP+ V EAL+RW++ E LI P FI AE+SGLI +G WVI + Sbjct: 515 ELLLYYQPQWQLADSPSVIGAEALIRWRNKEGELIAPDQFIPLAEKSGLIGAIGDWVIDE 574 Query: 479 VVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 RQ+ WRD+G LRVAVN+SARQ + + Q L++ ++ELTES L+ Sbjct: 575 ACRQLRIWRDQGKKQLRVAVNVSARQFRAGNLAEVVAQALRKHEIPAHCFELELTESILM 634 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 E E A ++ + + LG + LDDFGTGYSSL+ L+RFPI +K+D+ FVRD++ + + Sbjct: 635 EKPEEAAELLNRCAALGVGIALDDFGTGYSSLAYLSRFPITVLKIDRSFVRDLNHRSEAA 694 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 + +I+A+A + LQV+AEGVE+ ++ A+L G + QGFLF+ P+PA F + Sbjct: 695 LIADSIIALAHRMGLQVVAEGVETEEQRAYLQSRGCDLAQGFLFSPPLPAEQFAEF 750 Score = 82.6 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 40/120 (33%) Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 ++ I +D+ G+ + + G + +VIG++ F S R + Sbjct: 86 ETSNDWIWEVDTSGSYTYVSPQVKTLLGYRPDEVIGRTPFDFMPSGEAERVRDRFAAISA 145 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + +G+R+ L + DIT ++ +E LR A Sbjct: 146 EQEAIINLVNTNLHRQGRRVILETSGVPFYDQHGTWQGYRGIDRDITVRQQLEEWLRQSA 205 >UniRef50_C6P1Q1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Q1_9PROT Length = 1135 Score = 890 bits (2301), Expect = 0.0, Method: Composition-based stats. Identities = 188/671 (28%), Positives = 321/671 (47%), Gaps = 35/671 (5%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSA-------EQAARIR 55 + E++ + + + L + ++ E R + Sbjct: 477 NIIEASDSFCSMLGYQRNEMLGMNVCQWDADFSDPRIVKLFRDQFTNKGRTQFETRHRRK 536 Query: 56 EMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQ 115 + TVI + + L +H N + + + A Sbjct: 537 DGTVI------DVEISGYPLQLHGKPALFNS----------SRDITERKKIEVEIQIAAT 580 Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 A ++I D+ NI R NR D TG +VIG++ L ++ Sbjct: 581 AFE-AQEGMLITDADRNILRVNRAFTDITGYSAEEVIGKNPRILSSGLHDSH-FYAAMWN 638 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + A++ E+W G+ + I + S +DIT + A++ +R Sbjct: 639 TLVATGAWKGEIWNKRKNGEVYPERLAITAVKDARGVVINYVASLSDITLHKAAEDEIRS 698 Query: 236 LANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLL 293 LA D +TGLPNR + D + A+ + + +++LDLDNFK +ND GH GD LL Sbjct: 699 LAFFDPLTGLPNRRLLMDRLQQALVASSRSGKAGALLFLDLDNFKNLNDTLGHDIGDLLL 758 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS------RILTRLRLPFRI 347 + V+ + +C+ +AR GGDEF+V+ + S ++EA + +I++ L P+ + Sbjct: 759 QQVAQRLKNCVREGDTVARIGGDEFVVMLEDLSAESIEAASQTEAVGWKIISTLNKPYHL 818 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 EV+++ S+G L + + AD AMY AK+ GR F P+M + Sbjct: 819 EKFEVHSTPSIGATLFDSRPQIIDDLFKQADIAMYQAKKAGRNTMRFFDPQMQDTLNTRT 878 Query: 408 WLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGL 467 L+ +LRK++E + + YQ ++ EAL+RW P+RG++ P +FI AEE+ L Sbjct: 879 ALEADLRKSIERREFNLFYQIQVDEMNRPVGAEALIRWIHPKRGMVSPAEFIPLAEETDL 938 Query: 468 IVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 I+ +G WV+ + Q+ W++ + NL +AVN+SA+Q T ++ +++ + Sbjct: 939 ILNIGLWVLQEACAQLKTWQNNPLTRNLVLAVNVSAKQFRQSDFATQVRVFVEKYAIDPS 998 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 + +ELTES L EN E + ++ ++G Q LDDFGTGYSSL + + P++ +K+DQ Sbjct: 999 KLKLELTESMLQENIEDTILIMNALKEIGVQFSLDDFGTGYSSLQYIKKLPLNQLKIDQS 1058 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 FV D+ +++VRAI+A+A++L L VIAEGVE+ ++ L G QG+LF+KP+ Sbjct: 1059 FVHDLDFDRDDKAIVRAIIAMAKSLQLDVIAEGVETQEQRQLLLNKGCTHFQGYLFSKPL 1118 Query: 646 PAVAFERWYKR 656 P F+ +R Sbjct: 1119 PIREFDALLER 1129 Score = 182 bits (462), Expect = 6e-44, Method: Composition-based stats. Identities = 40/234 (17%), Positives = 69/234 (29%), Gaps = 20/234 (8%) Query: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI 60 ++ + + + L T DRT L QA T++ Sbjct: 239 LRLSEIESGRFQQDLGDGRGELTAFRASRLY-PFAVLTHIDRTRALQKWQA---EAKTLL 294 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 + + L + ++ + A R+ V + Sbjct: 295 AVVIPVLLAISLLAMAFYRR---------------LAQNEAQRREAERLQRINATVFDSS 339 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 AI+I D NI N TG DV+G++ L S +++ R Sbjct: 340 AEAIIITDLNANIISVNPAFTQITGYSPEDVLGKNPRIL-SSGQQSKGFYRELWEALLRD 398 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 N ++ EL G + + I TDITE ++ + LR Sbjct: 399 NFWQGELVNRHKNGSLYNIHLSISASRDGTGQLQHFIGVTTDITERKQHESELR 452 Score = 106 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 72/236 (30%), Gaps = 14/236 (5%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 + + + ++P L ++ +L ++ +L A +R+ Sbjct: 351 NIISVNPAFTQITGYSPEDVLGKNPRIL---SSGQQSKGFYRELWE---ALLRDNFWQGE 404 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQ----VVS 118 + ++ + + + + + L + ++ Sbjct: 405 LVNRHKNGSLYNIHLSISASRDGTGQLQHFI-GVTTDITERKQHESELRMESEKNMVLLR 463 Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 A I ILD GNI + G + ++++G +V + + + R F Sbjct: 464 NASDGIHILDPDGNIIEASDSFCSMLGYQRNEMLGMNVCQWDADFSDPRIV-KLFRDQFT 522 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + + E G + + + + S DITE ++ + ++ Sbjct: 523 NKGRTQFETRHRRKDGTVIDVEISGYPLQ-LHGKPALF-NSSRDITERKKIEVEIQ 576 >UniRef50_A0L9T5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=A0L9T5_MAGSM Length = 1275 Score = 890 bits (2301), Expect = 0.0, Method: Composition-based stats. Identities = 202/641 (31%), Positives = 325/641 (50%), Gaps = 8/641 (1%) Query: 24 TESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSL-TVDESDLSVHLVGR 82 ++S + E PD +++ + AA R M + + L +H +G Sbjct: 624 GDTSHASYSTYLELIHPDDRAKINRQMAAVTRGMQDRFEADHRIICHKSGELLHIHALGI 683 Query: 83 KINK-REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCE 141 R + GL A+ + A AIVI D++G+I N + Sbjct: 684 VSRDSRGVPSQMVGTLQDVTRRKMAEEGLVLAKMIFDNAGEAIVITDAQGDITDVNPAYQ 743 Query: 142 DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 G +++GQ+ L R + + G ++ E+W G+ + Sbjct: 744 RIMGYTRDEIVGQNPSILKSGRHDEQFYEQMWNEMLSEG-HWQGEIWDRRKSGEIFPKWL 802 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH 261 + DIT+++ +E+L LA D +T LPNR +D ++ + Sbjct: 803 TIDAIRDEQGVISNFVGLFMDITQQKETEEQLEKLAYYDPLTELPNRALFRDRLEQEMRL 862 Query: 262 ADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL 319 + +G+ ++DLD FK VND+ GH GD LL V+ I L +AR GGDEF Sbjct: 863 SARGGKSLGLFFIDLDRFKYVNDSLGHDKGDDLLIQVAGRIKHHLRTSDTVARLGGDEFT 922 Query: 320 VLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHAD 378 V+ Q + + +A I+ L F + EV+ S+GIA+ P+ G D + +HAD Sbjct: 923 VILPGIEQTNDVARIAGAIVKSLGEVFVLQGHEVFIGGSIGIAMHPDDGEDYETLTKHAD 982 Query: 379 TAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVR 437 TAMY AKE GRG + FT +MN+ L L+ LR+A+E +QL +HYQPK+ + + Sbjct: 983 TAMYRAKEEGRGTYKFFTSDMNEINGRRLSLERALRQAVECNQLTLHYQPKVDVKQCRIT 1042 Query: 438 SLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW-RDKGINLRVA 496 +EALVRW PE+GL+ P+DFI AEE+GLI+ +G WV+ + R L+VA Sbjct: 1043 GMEALVRWNHPEQGLVSPVDFIPIAEETGLIITIGEWVMQQACMDAKRLARSSRHPLQVA 1102 Query: 497 VNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQ 556 +N+SA+Q D + L++ LQ+ ++VE+TES + + + I + LG + Sbjct: 1103 INLSAKQFQDALLVAKLERSLQQSGLAPELLEVEITESLAMGDVNRTIEQIGELRALGVK 1162 Query: 557 VHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIA 616 V +DDFGTGYSSLS L + P++A+K+D+ F++D++ ++V +I+++A AL L V+A Sbjct: 1163 VSIDDFGTGYSSLSYLKKLPLNALKIDKSFIQDLYLDSDDTAIVSSILSMASALGLSVVA 1222 Query: 617 EGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 EGVE+ + FL + QG+ F+KP+P AFE++ + Sbjct: 1223 EGVENQAQIHFLCEKECPTIQGYFFSKPLPFEAFEKFLLDW 1263 >UniRef50_B2T9B2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderiales RepID=B2T9B2_BURPP Length = 1037 Score = 890 bits (2300), Expect = 0.0, Method: Composition-based stats. Identities = 197/661 (29%), Positives = 311/661 (47%), Gaps = 20/661 (3%) Query: 5 RESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSL 64 R + + + L P +++ E ++ + Sbjct: 373 RWINSAVEAYIGYTVDECMA-----LPDFAGTVIYPADIPRVAPEFQKALQGLRGDDLEF 427 Query: 65 M-MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 + LS V +K E+ G ++ D + + L A Sbjct: 428 RCVRKDGSLMWLSASWVPITDSKGEFIGFRTSGRD-ITERKQVEAELRIAAVAFDSM-EP 485 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 ++I D+ I R N + TG +++GQ+ L R + A + +G + Sbjct: 486 MMITDASATILRVNSAFTECTGYTAEEIVGQTPRVLRSGRHDDAFFQEMWEEIHSAGG-W 544 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 + E+W G+ + + + DITE + A+ER++ LA D++T Sbjct: 545 QGEVWDRRKNGEVYPKWLTISAVMSDNGTVSHYVGTHHDITERKIAEERIKELAFFDALT 604 Query: 244 GLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 LPNR + D + AI + N+ ++++DLD+FK +ND GH GD LL+ V+ + Sbjct: 605 RLPNRTLLLDRLRQAITASARNEACGALLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLA 664 Query: 302 SCLEHDQVLARPGGDEFLVLASNTS------QSALEAMASRILTRLRLPFRIGLIEVYTS 355 + +AR GGDEF+V+ N + EA+ RIL L P+ +G IE TS Sbjct: 665 DSVLESDTVARVGGDEFVVVLGNLHKNRQEAANQTEAVGERILAVLGSPYHLGKIEYRTS 724 Query: 356 CSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRK 415 S+G + H + +++ AD AMY +KE GR F P+M V + L+ LR Sbjct: 725 ASIGATVFRGHQASIDELLKQADLAMYKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRN 784 Query: 416 ALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWV 475 A+E++Q ++HYQ ++ V EALVRWQ P+RG++PP +FI AEE+GLIV LG WV Sbjct: 785 AIEDNQFLLHYQAQVVGT-RVTGAEALVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWV 843 Query: 476 ILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTE 533 + Q+A+W R +L +AVN+S +Q + ++ + +ELTE Sbjct: 844 LEAACAQLARWAARPDMAHLTIAVNVSVQQFRKADFVDNVLTIIGRTGARPDRLKLELTE 903 Query: 534 SCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQ 593 S L++N + + + G LDDFG GYSSLS L R P+D +K+D+ FVRD+ Sbjct: 904 SVLVDNVQDIIEKMSALKAKGIVFALDDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVD 963 Query: 594 PVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 + R IVA+A++L L VIAEGVE+ + FL G QG+ F +P+P FE Sbjct: 964 SNDAVIARTIVALARSLGLGVIAEGVETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFEAL 1023 Query: 654 Y 654 Sbjct: 1024 L 1024 Score = 69.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 55/176 (31%), Gaps = 15/176 (8%) Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 +L + + + L+ + G A A+ ++L + + + Sbjct: 306 ALPIASTGTGLSLLLALLTWLMMTGRGRAMRLASAMTKELRENEEKFRAIADCTVNWEIW 365 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQS--------VFKLFMSRREAAASRRNNRVFFR 178 + G + N E Y G + + + R A ++ + Sbjct: 366 WGTDGKPRWINSAVEAYIGYTVDECMALPDFAGTVIYPADI---PRVAPEFQKALQGLRG 422 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 ++E G ++L + + S I SG DITE ++ + LR Sbjct: 423 D----DLEFRCVRKDGSLMWLSASWVPITDSKGEFIGFRTSGRDITERKQVEAELR 474 >UniRef50_Q0AIX2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Proteobacteria RepID=Q0AIX2_NITEC Length = 791 Score = 889 bits (2299), Expect = 0.0, Method: Composition-based stats. Identities = 191/583 (32%), Positives = 307/583 (52%), Gaps = 12/583 (2%) Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 E +++ + L + V + +VI D I NR TG Sbjct: 205 DLELIREFASFTALAVQKVRATEALRLSATVFASIREGVVITDLEPRIVAVNRAYMRITG 264 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 E V+G++ + + + ++ + E+W G+ + Sbjct: 265 YSEEQVLGKNPKIIKSGLHD-KTFYQAMWATLKATGHWSGEVWNRRKNGEIYPQWLTINA 323 Query: 206 HS-----GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 N + TDI++ ++++ +L LA+ D +TGLPNR Q + AI Sbjct: 324 VCIDSSCCDESNSCNYVGVFTDISQIKQSEAQLAQLAHYDPLTGLPNRLLAQSQLHQAIE 383 Query: 261 HADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 A + VGV+Y+DLD FK VND+ GH GD+LL ++ + + + LAR GGDEF Sbjct: 384 RAQRHGRLVGVLYIDLDRFKNVNDSLGHPVGDELLIKLAERMKKRVREEDTLARLGGDEF 443 Query: 319 LVLASNTSQ-SALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRH 376 L++ + +A ++ L PF + E++ + S+GI+L PE S++T +I+H Sbjct: 444 LLVLEDVRDLGDPAFVAQSLINLLTSPFVLPSGHEIFINASIGISLFPEDASNATELIQH 503 Query: 377 ADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGE 435 +D AMY AK+ GR + T ++ E L ++ LR AL ++L++HYQP + G Sbjct: 504 SDMAMYQAKKEGRNTYRYHTEALSVAANERLIMENRLRYALSAEELILHYQPLVDARTGY 563 Query: 436 VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLR 494 V +EALVRWQ P + ++PP FI AEE+GLIVPLG WV+ +Q W D G+ L Sbjct: 564 VVGVEALVRWQPPGKAMVPPGKFIPIAEETGLIVPLGEWVLRTACKQARAWIDAGLSPLV 623 Query: 495 VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLG 554 +AVN+S RQ + + ++++L+E +++ELTES +E+ E ++ + + LG Sbjct: 624 MAVNLSVRQFQSENLVGMVQRILEETQLPADYLELELTESMFMEHVEQSIETLNKLKTLG 683 Query: 555 AQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQV 614 + +DDFGTGYSSL L RFPID +K+DQ FVRD+ + + I+A+A+ L L V Sbjct: 684 VHLAIDDFGTGYSSLIYLKRFPIDKLKIDQRFVRDLADDHNDREIAATIIAMARGLKLGV 743 Query: 615 IAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 +AEG+ES ++ AFL + + QG+LF +P+PA+ E W + + Sbjct: 744 LAEGIESEEQLAFLRQQDCDYYQGYLFHRPVPAIELEAWLREH 786 Score = 45.6 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 2/64 (3%) Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + S + G+ ++L + +G ++ + DI+E +R + L Sbjct: 4 QSILISEGQLVHDYRFYHRDGRIVWLLDQLQLIRDAGDRPYEVVGTCLDISERKRTE--L 61 Query: 234 RILA 237 A Sbjct: 62 IRQA 65 >UniRef50_A0L8P4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L8P4_MAGSM Length = 754 Score = 888 bits (2296), Expect = 0.0, Method: Composition-based stats. Identities = 207/653 (31%), Positives = 337/653 (51%), Gaps = 15/653 (2%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMS 67 + + +P ++R + + AE AR +E+ + + Sbjct: 93 AGAIDLIHKEDPKEVF-----LMRVAAMGRFIETQNAHREAEAHARQKELQA--AEQLRR 145 Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL 127 + V + E + + AV GL +V AI++ Sbjct: 146 IEEQARQQLEQRV--RERTLELTQSNERLSNEVAVRMRAESGLRLIHKVFENTSEAIILT 203 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 D +G I N + TG + +G + R + A N ++ E+ Sbjct: 204 DPQGMILDINPAFTEITGFSREEALGHNPRSFKSDRHD-ATFYTNMWRKIAEEGFWQGEI 262 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPN 247 W G+ I +DI+E + + +L LA D++T LPN Sbjct: 263 WDRRKNGEIYPKRLTINAVRNQAGEVENYIGIFSDISESKATELKLERLAYYDALTQLPN 322 Query: 248 RNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLE 305 R D ++H +A + +V V ++DLD FK+VND GH GD+LL+ V+ + C+ Sbjct: 323 RMLFHDRLEHEFYNAQRHRKQVAVFFIDLDRFKQVNDTLGHSAGDELLQHVAQRLEGCVR 382 Query: 306 HDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSP 364 +AR GGDEF V+ ++ S + + +A ++L L+ I +++ S+GIAL P Sbjct: 383 AADTVARMGGDEFTVILADISDNESVARVARKVLEELQKSISIKGHDIFVGASIGIALYP 442 Query: 365 EHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVI 424 ++G+D + ++AD AMY AKE GRG + F+ EMN + L L++ L A+ + L + Sbjct: 443 DNGNDVETLTKNADMAMYRAKESGRGNYKFFSEEMNVSTSQRLSLESQLHHAVNANLLEV 502 Query: 425 HYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQV 483 +YQPK+ G + +EALVRW + +IPP+ FI AEE+GLIVPLGR V+ + Sbjct: 503 YYQPKLNMQSGIMVGMEALVRWPQADGSMIPPIQFIPVAEETGLIVPLGRLVMRQAMLDC 562 Query: 484 AKW-RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDEL 542 A+W R+ G+NLRVAVN+SAR+ + ++Q L E + +VE+TES ++ + E Sbjct: 563 ARWVRETGMNLRVAVNLSAREFQSPGLVVEIEQTLAECGLDARHFEVEITESLMMHDVEN 622 Query: 543 ALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRA 602 A++ ++Q S+LG + +DDFGTGYSSLS L +FPI ++K+D+ FV+DI P +V A Sbjct: 623 AIATLEQISRLGIHIAMDDFGTGYSSLSYLKKFPIHSLKVDRSFVKDIPDDPNDIEIVAA 682 Query: 603 IVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 I+++A+ LNL+V+AEGVE+ ++ +FL +N +E QG+ F+KP+ AV F + Sbjct: 683 ILSLAKVLNLKVVAEGVETQEQLSFLRQNLCDECQGYSFSKPLSAVDFTAFLA 735 >UniRef50_C6NZD9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZD9_9PROT Length = 1149 Score = 888 bits (2296), Expect = 0.0, Method: Composition-based stats. Identities = 195/571 (34%), Positives = 311/571 (54%), Gaps = 5/571 (0%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A D + +S L V ++ ++IVI D NI+ N TG +V+ Sbjct: 580 ALERFDAETERKKMSETLLKLSLAVEQSPNSIVITDLDANIEYANSNFTKVTGYSLDEVL 639 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G++ S + A+ + G ++ EL+ G S Sbjct: 640 GKNPR-FMQSGKTPKATYEDMWAHLTRGEPWKGELFNRRKDGTEYIESVLISPVSQVDGR 698 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVV 270 + + DITE+R +ER+ L + D +TGLPNR + + +A++ A + ++ V+ Sbjct: 699 VMNYLAIKEDITEKRLTEERIEKLEHFDHLTGLPNRTQLNERFKYALSLAQRSGEQMTVM 758 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL 330 +LDLD+FK +ND GH GDQLL DV+ + L + ++R GGDEF+++ T ++ Sbjct: 759 FLDLDHFKDINDTLGHSIGDQLLMDVAKRLKETLRDEDTVSRQGGDEFILILPGTDENGA 818 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 +A++++ + F+ E+ +CS+GIA+ P G + + ++ADTAMY K GR Sbjct: 819 AHVAAKLMEAVSQAFQFEQHELVATCSIGIAIYPHDGENFETLSKNADTAMYRVKHDGRN 878 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPE 449 FC FT EM L L LR AL QL +HYQP+I+ G V EAL+RWQ PE Sbjct: 879 GFCFFTSEMQAHSARTLQLGNALRHALTRGQLHLHYQPQISTQDGHVVGAEALLRWQHPE 938 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQT 508 G I P +FI AE++G I+P+G WV+ ++Q+ W D G+ + +AVN+SA Q Sbjct: 939 LGSISPAEFIPIAEDNGQIIPIGEWVLRTAIKQLKDWMDSGLPPMIMAVNLSAAQFRQSN 998 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + + +L E + +++ELTE+ +++ +LA+ V+ + G ++ +DDFGTGYSS Sbjct: 999 LMELVTSILDESKVPHRYLELELTEAVAMDDPQLAIGVMDKLHTGGIKMSIDDFGTGYSS 1058 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 LS L RF + +K+DQ FV DI P +++V AI+ +A +L +Q IAEGVE+A + +FL Sbjct: 1059 LSYLKRFKVYKLKIDQSFVHDITDDPDDKAIVAAIINMASSLGMQTIAEGVETAGQLSFL 1118 Query: 629 TKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 G NE QG+ F+KP+PA F + ++ + Sbjct: 1119 RLQGCNEVQGYYFSKPLPAEQFVSYLQKQGQ 1149 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/178 (8%), Positives = 38/178 (21%), Gaps = 29/178 (16%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 + L+ S + + + G+ ++ D IG+ Sbjct: 280 RKQIRLRTQQLADSSSQLRATLDAIPDLLFEIGLDGHFYSYHSSRNDLLTAPATSFIGKK 339 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRL---------FLFRNKFVH 206 + + G+ + + Sbjct: 340 IGDVLPPDAADICMSALQEANMTG-----------RSNGKTYALSLPQGESWFELSISKK 388 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN 264 + I D+T+ + + + +T L A + AI N Sbjct: 389 QDAKNQAPRFIVLVRDVTQRKVNETHILR------LTKL---YAALSQCNQAIVRCSN 437 >UniRef50_C5JAR6 Conserved uncharacterized protein n=1 Tax=uncultured bacterium RepID=C5JAR6_9BACT Length = 922 Score = 888 bits (2295), Expect = 0.0, Method: Composition-based stats. Identities = 206/666 (30%), Positives = 328/666 (49%), Gaps = 18/666 (2%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + V + + L S P+R ++A R+ + Sbjct: 262 RIVSWNEGA-EAVYGFRQDEILG--------SPLSRLIPERYHAINAAWVKRMAKDRGRH 312 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAW----HDTPAVARDLSHGLSFAEQVV 117 + + S + + W + + + L Q V Sbjct: 313 NFTGKPIEAHGLRKSGEEFPVEYSVGRWREAGRNFFSVAARDISKRKQSEEKLRHLSQAV 372 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 ++ + +VI ++ G IQ N TG +VIG+ L S R AA + Sbjct: 373 EQSPADVVITNAEGIIQYVNPRFSQVTGYASKEVIGKKPSIL-KSGRTPAALYDSLWETI 431 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 +G + EL G + + I DI+ + +ERL A Sbjct: 432 SAGKEWRGELMNRKKDGSLFWQHAIISPIRDNSGVITHYISVKEDISIRKEYEERLVRQA 491 Query: 238 NTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRD 295 N D++TGLPNR D + AI A KV ++ LDLD+FKKVND GH GD LL++ Sbjct: 492 NYDALTGLPNRILAMDRLKQAIAQAQRYNRKVALMLLDLDDFKKVNDTLGHAAGDLLLKE 551 Query: 296 VSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYT 354 +L ++ CL +AR GGDEF++L + S+ E +A +IL PF +G E Y Sbjct: 552 AALRLVDCLREGDTVARLGGDEFVLLLPDLTDTSSAEVVAEKILAACNQPFDVGGHEAYI 611 Query: 355 SCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLR 414 + S+GIA+ P+ D ++R+AD AMY +K G+G F FTPEMN R E++ +++ LR Sbjct: 612 AGSIGIAIFPDDERDPILLMRNADAAMYRSKREGKGVFRYFTPEMNARALEHMRMESQLR 671 Query: 415 KALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGR 473 A+E +++ +HYQP + G + EAL+RW +P G + P FI AEE+GLI+ +G Sbjct: 672 HAIERNEMKVHYQPLVDSGTGRLVGAEALLRWSNPVLGEVSPEQFIPLAEETGLILSIGA 731 Query: 474 WVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTE 533 WV+ R A W+ + VAVNIS +Q +T+ ++ L E +++ELTE Sbjct: 732 WVLRTACRDAASWQRPDHEIFVAVNISGKQFQKRTLVEIVRSSLNESGLPPACLELELTE 791 Query: 534 SCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQ 593 S L+E+ + LS+IQ+ LG +DDFGTG+SS+S L RFP D +K+D+ F++D+ Sbjct: 792 SVLLEHTQETLSIIQELESLGVGFAIDDFGTGFSSISYLRRFPFDTLKIDRSFIKDLGDN 851 Query: 594 PVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 LV++I+A+A +++L+V+ EGVE+ + FL +G + QG+L+++P+P F+ Sbjct: 852 EGDADLVKSIIAMANSMSLKVVGEGVETHGQREFLRLSGCHIAQGWLYSRPIPGKDFQEL 911 Query: 654 YKRYLK 659 + Sbjct: 912 IDGWTH 917 Score = 95.3 bits (237), Expect = 7e-18, Method: Composition-based stats. Identities = 34/244 (13%), Positives = 72/244 (29%), Gaps = 20/244 (8%) Query: 3 TVRESTTLYNFLGSH-NPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 T+ + + P + S + R L+ + Sbjct: 137 TIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPACHDLVAKRLKLLA--------RGEQLP 188 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVV---- 117 M + +D + V S W D + + A+ Sbjct: 189 LVEMRLVRLDGGQVEVESTMGMTTYGGHRAMQSVWRD-ISARKQAEAASQAAKDHFLAFA 247 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 A++ D G I +N E G ++ +++G + +L R A + R+ Sbjct: 248 RSTPDALIAFDEEGRIVSWNEGAEAVYGFRQDEILGSPLSRLIPERYHAINAAWVKRMAK 307 Query: 178 RSGNA-YEV---ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 G + E G+ + + F + DI++ ++++E+L Sbjct: 308 DRGRHNFTGKPIEAHGLRKSGEEFPVEYSVGRWR-EAGRNFFSVA-ARDISKRKQSEEKL 365 Query: 234 RILA 237 R L+ Sbjct: 366 RHLS 369 Score = 70.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 69/240 (28%), Gaps = 14/240 (5%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 T + L P + + E R+ + + Sbjct: 14 YFNTQFLKLYKFPPGLAQPGTPFETFIRYNAEHGEYGDCDIETEVRFRVERARKFEAHTV 73 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 T D L + + + + L ++V A AI+ Sbjct: 74 ERTTPDGRVLEIQGSPLPGG--GFITTYTDISERRNAEVRLRESEERFRRLVELAPDAIL 131 Query: 126 ILDSRGNIQRFNRLCEDYTGL-KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 + G I NR + G D+IG+S+ ++ ++R G Sbjct: 132 VH-QGGTIVYANRQAQIMMGAPTPTDLIGRSIIEIIDPACHDLVAKRL--KLLARGEQLP 188 Query: 185 -VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ-----ERLRILAN 238 VE+ + G ++ + + + G + + DI+ ++A+ + LA Sbjct: 189 LVEMRLVRLDGGQVEVESTMGMTTYGGHRAMQSVW--RDISARKQAEAASQAAKDHFLAF 246 >UniRef50_A1KAZ1 Hypothetical signaling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KAZ1_AZOSB Length = 952 Score = 887 bits (2293), Expect = 0.0, Method: Composition-based stats. Identities = 207/657 (31%), Positives = 320/657 (48%), Gaps = 14/657 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + + + L + + R ++ E + E + + Sbjct: 302 WMSHNLTRMTGFSVAEALAQGWWARTVHPDDLERASRAVRAVEEDGHYVHEYRIRCADGG 361 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + D L + A W D R + L V+ H +V Sbjct: 362 VRWIRD------ELRAVRDEGGRVVRVAGVWID-ITEQRQATELLRLNSAVIESTHDGVV 414 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 + D G I NR + TG +V+GQ+ L R + + + ++ Sbjct: 415 LTDLDGAIVAVNRAFTEVTGYSRDEVVGQNPRFLQSGRHD-RGFYLSMWAALKEAGHWQG 473 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 ELW G+ + + + TDI++ ++ ++RL LA+ D +T L Sbjct: 474 ELWNRRKNGELFPEWLTLNAVRNEVGHVTHYVGVFTDISKLKQTEDRLDYLAHHDPLTDL 533 Query: 246 PNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR + ++HA++ A +V V++LDLD FK VND+ GH GD+LLR V+ + Sbjct: 534 PNRLLVLSRLEHALDGAQRRGCRVAVMFLDLDRFKTVNDSLGHAAGDELLRAVAARLRGA 593 Query: 304 LEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIA 361 L + L R GGDEF+VL + +A ++ L PF + EV+ S+GI+ Sbjct: 594 LREEDTLGRLGGDEFMVLLEHVEAPADAAVVAKNLVEVLAAPFALSNGHEVFIRASIGIS 653 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 P+ G D ++R+AD AMY AK GR + +T ++ + E L L+T LR+ALE+D+ Sbjct: 654 FYPDDGDDFMTLVRNADAAMYRAKAQGRNTYGFYTEDLIRSATERLALETRLRRALEHDE 713 Query: 422 LVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 V++YQP + G + EALVRW+ ++ P FI AEE+GLIV LG WV+ D Sbjct: 714 FVVYYQPVLGVKDGRLLGAEALVRWKPQGEPMVSPAAFIPVAEETGLIVALGEWVLRDAC 773 Query: 481 RQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 RQV +W D G +VAVN+SA Q Q + L VL E +++E+TES L+E Sbjct: 774 RQVREWIDAGYAFGQVAVNLSAEQFRRQDVSAMLATVLAETGLPATQLELEITESSLLEA 833 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 E A+ ++++ Q G + +DDFGTGYSSL+ L RF ID +K+D+ FV+DI ++ Sbjct: 834 GEHAVGLLERLKQQGVGLAIDDFGTGYSSLAYLKRFSIDKLKIDRSFVQDIADDSNDLAI 893 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 AIVA+A+AL++ V AEGVE + L G QG+L + P+PA FE + R Sbjct: 894 ASAIVAMARALDMAVQAEGVEGEAQLELLRGLGCGSYQGYLCSPPLPADEFEARFLR 950 >UniRef50_B9Z8G8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8G8_9NEIS Length = 887 Score = 885 bits (2289), Expect = 0.0, Method: Composition-based stats. Identities = 206/662 (31%), Positives = 325/662 (49%), Gaps = 27/662 (4%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVL--------RFSTTETTEPDRTLQLSAEQAARIREM 57 + ++ L + + T S E+ R R Sbjct: 231 RVNQRLCDILGYSREELLRLTLQDITHPADQDSDLVMTRRLLSGEIPSFSIEKRYRQRRG 290 Query: 58 TVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVV 117 ++ ++L +L DE + + + + + A V Sbjct: 291 QLVWANLTAALMRDEGGRPEYFIL--------------VVEDISARKQSEEAQQLALTVF 336 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 ++I D I N + T ++G++ + ++AA RR R Sbjct: 337 DSMLEGVIITDHHRRILAVNAAFGEITRYPVEALLGRTPPLWRTAHQDAAFYRRIWRQLL 396 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 SG +E ELW G L+ + + DI++ + +QE+L LA Sbjct: 397 ASGR-WEGELWHRKRDGTPFPLWLSISCVRDEQGRPRQYVFVFNDISQLKDSQEQLERLA 455 Query: 238 NTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRD 295 + D +TGLPNR+ ++HA+ A + + V+++DLD FK +ND+ GH GD+LL Sbjct: 456 HYDPLTGLPNRHLALARLEHALERARRHAFPLAVMFIDLDRFKTINDSLGHQAGDELLVA 515 Query: 296 VSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRI-GLIEVYT 354 ++ + L + LAR GGDEFLV+ + ++A +L + PF G E Y Sbjct: 516 IAQRLHQRLRQEDTLARLGGDEFLVVIEEAPVQQVASIAHALLKVVDQPFGFSGGGEAYV 575 Query: 355 SCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLR 414 S+GI+L P G ++ +IR+AD AMY AK G + +T + + E L ++T+LR Sbjct: 576 GASIGISLYPGDGRSASELIRNADAAMYLAKAQGSNAYRFYTESLTRAANERLSMETSLR 635 Query: 415 KALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGR 473 +AL ++ V+HYQP + G V E LVRWQ P L+PP FI AEE+GLIVPLG Sbjct: 636 RALRCEEFVLHYQPLVELASGRVLGAEVLVRWQPPGEALVPPSRFIPLAEETGLIVPLGD 695 Query: 474 WVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTE 533 WV+ + RQ W D G+ L +AVN+S RQ + +++ LQ +++ELTE Sbjct: 696 WVLHEACRQGKAWLDAGLPLLLAVNLSPRQFLRHDLVGQVRKALQGSGLPPAQLELELTE 755 Query: 534 SCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQ 593 L+E E A+ + +LG + +DDFGTGYSSL+ L RFP+D +K+D+ FVRD+ + Sbjct: 756 GALMEQAEQAVKTLHALKRLGVSLAIDDFGTGYSSLAYLKRFPLDKLKIDRSFVRDLPRD 815 Query: 594 PVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 +V I+A+ + L L+ +AEGVE+ ++ AFL + G + QG+LF+ P+PA AFERW Sbjct: 816 SSDAEIVTTIIAMVRNLKLEALAEGVETPQQLAFLRQLGCDSGQGYLFSPPLPAEAFERW 875 Query: 654 YK 655 + Sbjct: 876 LR 877 Score = 109 bits (273), Expect = 5e-22, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 13/226 (5%) Query: 24 TESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM--------SLTVDESDL 75 + +L +ET TL R R TV+ + L + + Sbjct: 108 GAARQLLGLPASETRTERGTLLQRVAAGDRARVATVLDAMLAEGSGSVEFCRAGTGAAPV 167 Query: 76 SVHLVGRKINKREWAGNASAWHDTPAVARD----LSHGLSFAEQVVSEAHSAIVILDSRG 131 + L + E G +V + L +A I L G Sbjct: 168 WLRLHYQVHLDEEAPGLVLGVLQDISVQKAQDDALREREQLFRGTFEQAAVGIAHLGLDG 227 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 + R N+ D G +++ ++ + + + R+ ++ +E Sbjct: 228 HWIRVNQRLCDILGYSREELLRLTLQDITHPADQDSDLVMTRRLLSGEIPSFSIEKRYRQ 287 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 +GQ ++ + G + I DI+ ++++E + LA Sbjct: 288 RRGQLVWANLTAALMRDEGGRPEYFILVVEDISARKQSEEA-QQLA 332 >UniRef50_A6SVJ0 Uncharacterized conserved protein n=4 Tax=Proteobacteria RepID=A6SVJ0_JANMA Length = 956 Score = 885 bits (2288), Expect = 0.0, Method: Composition-based stats. Identities = 197/656 (30%), Positives = 334/656 (50%), Gaps = 14/656 (2%) Query: 12 NFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVD 71 + + ++ ++ + + + + L A + + S++ + L VD Sbjct: 297 QPEPYDHVFDVAGKTWSMVVSTPSMLFLKNSSSALWAFLVGL---LLSVVSAIYVQLIVD 353 Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS-- 129 S + + A + H L E+ + + +AI+I + Sbjct: 354 RSRR--IQLLVDDRTAQLRTVNDDLIADIAARKHAEHELQLRERAIEASANAIIIARAVA 411 Query: 130 -RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW 188 ++ N TG + +G+++ L+ E R L Sbjct: 412 PDYPLEYVNPAFTRITGYSPEEALGRNIGFLWGKDWEQPGI-EELRSIALEKREGHAVLR 470 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 G + + + DIT +R + L N D++TGL NR Sbjct: 471 NYRKDGALFWSDLYIAPVKDDTGEVSHFVVALYDITATKRYESELEFQTNRDALTGLANR 530 Query: 249 NAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 + ++D + AI++A + + + ++DLD FK VND GH GD LL+ ++ + + Sbjct: 531 SLLRDRLSQAISYAHRYNHPIWIAFVDLDRFKFVNDTLGHQAGDLLLKAIAERLQHAVRD 590 Query: 307 DQVLARPGGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPE 365 ++R GGDEF+++ + L + RI+ + P I E + S S+G+A+ P Sbjct: 591 TDTVSRMGGDEFVLILPERVDAGLSTGIVQRIMDGIAQPLTIEGHEFFISSSIGVAVYPN 650 Query: 366 HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIH 425 G +I+HAD AMY AKE GR F +T MN+R E L L+ +LR A+E + ++H Sbjct: 651 DGVTPEELIKHADIAMYRAKETGRNNFQFYTSSMNERALERLRLEGDLRNAMERGEFILH 710 Query: 426 YQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 YQP++ G++ +EAL+RWQ PE G+IPP+ FI AEE+GLIVP+G WVI + RQ Sbjct: 711 YQPQLDLRTGKIVGVEALIRWQHPELGMIPPMRFIGLAEETGLIVPIGAWVIREACRQNK 770 Query: 485 KWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 W++ G+ +LR++VN+SARQ A Q + ++ L+E +++ELTES ++ + + A Sbjct: 771 VWQEHGLGSLRMSVNLSARQFAQQDLLESIALALEETQLPPQCLEIELTESLVMADVDHA 830 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 + ++++ LG Q+ +DDFGTGYSSLS L RFPID +K+D+ FV DI P ++V +I Sbjct: 831 IGILRELKALGVQLSIDDFGTGYSSLSYLKRFPIDVLKIDRSFVNDITTDPDDAAIVASI 890 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 +++A +L L VIAEGVE+ ++ A+L ++ ++ QG+ F++P+ A A E K + Sbjct: 891 ISLAHSLRLTVIAEGVETEEQLAYLQQHDCDQIQGYFFSRPITADAMEVMLKDDKR 946 >UniRef50_A5GBG4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Geobacter RepID=A5GBG4_GEOUR Length = 709 Score = 884 bits (2286), Expect = 0.0, Method: Composition-based stats. Identities = 198/640 (30%), Positives = 326/640 (50%), Gaps = 11/640 (1%) Query: 25 ESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSV-HLVGRK 83 + D++ T+ +Q + ++ VI++ +D D+ + H V + Sbjct: 55 HAPDIVLTDMQMPVMDGITMAKEIKQLNKEAKIIVISAHNDTGHIIDAIDIGINHYVLKP 114 Query: 84 INKREWAGNASAWHDTPAVARDLSHGL---SFAEQVVSEAHSAIVILDSRGNIQRFNRLC 140 IN + + R + + V ++ AI+I D+ G I+ N Sbjct: 115 INHNKLRAVIGQCMTSIKWERQIREQEKFIRKLSRAVEQSPVAIIITDTSGTIEYVNPRF 174 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 TG + IG+ L R G + E G+ + Sbjct: 175 TQLTGYTSAETIGKKPHILKSGE-TPPEEYRKLWEIISGGGEWWGEFHNRKKNGELYWAS 233 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 + + + I DITE ++A+E ++ +A D++TGLPNR+ +L+ A+ Sbjct: 234 ASISPITNGNEQITHFIAFQEDITERKQAEETIKQMAYYDTLTGLPNRHLFNELMHLALA 293 Query: 261 HADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHD-QVLARPGGDE 317 A + + V++LDLD FK +ND GH GDQLL+ + + C D +AR GGDE Sbjct: 294 QAHRHNRLLAVLFLDLDRFKHINDTLGHTVGDQLLQASAHRLKECCRRDRDTVARRGGDE 353 Query: 318 FLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRH 376 F++L + +A +I+ F + IE++ S +GI++ P G D+ +I++ Sbjct: 354 FIILLPDIDDVQEAVRVAQKIIDAFTQVFVLPDIELFISTCIGISIFPNDGRDTETLIKN 413 Query: 377 ADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGE 435 AD AMY AKE GR ++ ++T M+++ F L ++ +LRKAL+ ++ ++YQPK+ G+ Sbjct: 414 ADMAMYRAKEQGRSRYHLYTSSMDEQAFRRLTMENSLRKALQREEFSLYYQPKVNIKTGQ 473 Query: 436 VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LR 494 + LEALVRWQ+PE GLI P FI AE++GLI+PLG WV+ Q W+ +R Sbjct: 474 IVCLEALVRWQNPEMGLILPNQFIPLAEDTGLIIPLGEWVLRTACAQNKTWQLLNYPPMR 533 Query: 495 VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLG 554 VAVN S RQ + ++Q+L E + C +++ELTE+ +++N E + + + S LG Sbjct: 534 VAVNFSPRQFQQPRLTDMVEQILGEADLAPCWLELELTENVMLQNVEKTVQTLNRLSNLG 593 Query: 555 AQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQV 614 + +DDFGTGYSSLS + + PI +K+D+ FV DI+ ++ A++ +AQ+L L V Sbjct: 594 IHISIDDFGTGYSSLSYIKKLPIQTLKIDRSFVHDINTNADDAAIAIAVITMAQSLRLNV 653 Query: 615 IAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 IAEGVE+ ++ L E QG+LF+KP+P Sbjct: 654 IAEGVETLEQMKLLDGLNCPEMQGYLFSKPLPVAEMTTLL 693 >UniRef50_C7RS22 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RS22_9PROT Length = 1006 Score = 884 bits (2286), Expect = 0.0, Method: Composition-based stats. Identities = 194/650 (29%), Positives = 297/650 (45%), Gaps = 20/650 (3%) Query: 25 ESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTV-------DESDLSV 77 S T + D + E R++ + T+ + D S + Sbjct: 359 PSYGQFFGDTRDLRGSDSFADVHPEDRERVKRVFRQTTETGRGQEIEYRLVRNDGSVRHM 418 Query: 78 HLVGRKINKREW-AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF 136 GR + R+ A + A + + I D+ I R Sbjct: 419 ASAGRVLGDRQGEAARVVVVSRDVTERKQAEQWERIAATAFE-SQQGMFITDANAVILRV 477 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR 196 N+ D TG + IGQ+ KL S R A+ R ++ E+W G Sbjct: 478 NQAFTDITGYAADECIGQTP-KLLSSGRHDASFYAAMRESIERNGVWQGEIWNRRKNGDV 536 Query: 197 LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLID 256 + + + TD++ + AQE +R LA D++TGLPNR + D + Sbjct: 537 FPEWLTISSVRDGDGVVTHYVSALTDMSAHKAAQEEIRHLAFYDALTGLPNRRLLHDRLR 596 Query: 257 HAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPG 314 AI + + ++++DLDNFK +ND GH GD+LL+ V + S + +AR G Sbjct: 597 VAIASSVRSERQGALLFIDLDNFKTLNDTLGHDMGDRLLQQVGQRLSSSVREGDTVARLG 656 Query: 315 GDEFLVLASNTSQ--SALEA----MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGS 368 GDEF+V+ N + + +I+ L P+ + + + + SVGI L Sbjct: 657 GDEFVVMLENLGERPEEAAGQSRIVGEKIIKLLNRPYDLSGHDYHNTPSVGITLFGGQQV 716 Query: 369 DSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQP 428 +++ AD AMY AK GR F P M V ++ +LR A+ + YQP Sbjct: 717 GIDELMKRADLAMYEAKASGRNALRFFDPRMQAVVTARADIEKDLRAAVGRQSFFLAYQP 776 Query: 429 KITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD 488 ++ G+V EAL+RWQ +RG + P +FI AEE+GLI+PLG WV+ Q A W Sbjct: 777 QVDASGQVIGAEALLRWQHQQRGTVSPAEFIPVAEETGLILPLGLWVLETACAQAALWAA 836 Query: 489 KG--INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSV 546 + V+VN+SARQ + VL + +ELTES L++N + ++ Sbjct: 837 RPGRERFTVSVNVSARQFRQANFVDQVLAVLARSGAHPRNLKLELTESMLLDNVQDIIAK 896 Query: 547 IQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAV 606 + G LDDFGTGYSSLS L + P+D +K+DQ FVRD+ P + + R I+A+ Sbjct: 897 MSALKARGVGFSLDDFGTGYSSLSYLKQLPLDQLKIDQSFVRDLLTDPNDEVIARTIIAL 956 Query: 607 AQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 A+ L L VIAEGVES ++ L G QG+LF++P+ FE + +R Sbjct: 957 ARTLGLSVIAEGVESVEQQDALAAQGCLAYQGYLFSRPLALADFEAFLRR 1006 Score = 72.2 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 44/148 (29%), Gaps = 8/148 (5%) Query: 97 HDTPAVARDLSHGLSFAEQVV----SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 + L L ++ I +LD +G + + G + Sbjct: 314 TQDITARKQLEASLREQKEFFRLISESIGEHIAVLDLQGQRLYNSPSYGQFFGDTRD-LR 372 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G F + +R R +G E+E + G + V Sbjct: 373 GSDSFADVHPE-DRERVKRVFRQTTETGRGQEIEYRLVRNDGSVRHMASAGRVLGDRQGE 431 Query: 213 EIFLICSGTDITEERRAQ--ERLRILAN 238 ++ D+TE ++A+ ER+ A Sbjct: 432 AARVVVVSRDVTERKQAEQWERIAATAF 459 Score = 52.6 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 9/156 (5%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS-RGNIQRFNRLCE 141 + + AS A + L+ A+ V A+ + D G I + Sbjct: 182 QSRIDDVRRLASDLAQRTAELQAREADLNRAQAV---ANVGSWVYDLVSGRI-DMSAETC 237 Query: 142 DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR-LFLF 200 GL V G + + + + G ++ EL + G+ ++ Sbjct: 238 RILGLPTGTV-GSLDAFMARVHPDDRDTLQQAAAAALRGEPFDNELRLVF--GETTRWIT 294 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 + V + + + DIT ++ + LR Sbjct: 295 QRAEVEFDEEGKPLRSLGTTQDITARKQLEASLREQ 330 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 883 bits (2284), Expect = 0.0, Method: Composition-based stats. Identities = 187/651 (28%), Positives = 306/651 (47%), Gaps = 17/651 (2%) Query: 15 GSHNPYWRLTESSDVLRFS---TTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVD 71 S L + L + + D + + T + D Sbjct: 311 YSKRWKEMLGYDENELLPTNQEWADRVHHDDVAYVKQTMQDYLEGKTALYVVEYRLKCKD 370 Query: 72 ESDLSVHLVGRKINKREWA--GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS 129 + G +++ + H + + L A + IV+ + Sbjct: 371 NRYKWILGRGMIVSRDDQGNPLRMIGTHTDITERKKIEQQLRIAATAFE-SQEGIVVTNE 429 Query: 130 RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWI 189 NI R N+ D TG + + G+ L R+ RN R ++ E+ Sbjct: 430 NFNILRVNQAFIDITGYEAEEATGKKPNILKSGRQSGE-FYRNIYTSLRETGSWSGEIIN 488 Query: 190 PTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRN 249 G+ + + TDI+ + A ER+ LA D +T LPNR Sbjct: 489 RRKNGEIYPEHLTITAVKDADGQTTNYVGMFTDISVAKAASERIENLAFFDPLTNLPNRR 548 Query: 250 AMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHD 307 D + A+ ++ N +V+LDLD+FK +ND GH +GD LL+ V+L + +C+ Sbjct: 549 LFSDRLTQALVNSTRSGNYGALVFLDLDHFKSLNDTLGHDYGDMLLKQVALRLSNCVREG 608 Query: 308 QVLARPGGDEFLVLASNTSQSALEA------MASRILTRLRLPFRIGLIEVYTSCSVGIA 361 +AR GGDEF++L N S + +EA + +IL L P+++ E ++ S+GI+ Sbjct: 609 DSVARLGGDEFVLLVENLSANDVEAAHQIEAIGDKILMSLNQPYQLQSHEYLSTPSIGIS 668 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 L H S +++HAD AMY AK+ GR F P M + + + L+ L+KA+E Q Sbjct: 669 LFNGHQESSEDLLKHADIAMYQAKKAGRNTLRFFDPLMQETINMRVDLERELKKAIEQKQ 728 Query: 422 LVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 ++YQ ++ G+ EAL+RW+ PERG+I P+ FI AEE+GLI +G WV+ Sbjct: 729 FELYYQVQMNSAGQPSGAEALIRWRHPERGIISPIQFIPVAEETGLITQIGEWVLNQACL 788 Query: 482 QVAKWR--DKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 Q+ W+ + +A+N+SA+Q +K ++ + + + +ELTES LI+N Sbjct: 789 QLQAWQLDQASKDFSLAINVSAKQFLQPDFANQVKNSIRSFHIDNTKLKLELTESMLIDN 848 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 E + + ++G Q LDDFGTGYSSL L P+ +K+DQ FVRD+ ++++ Sbjct: 849 IEYVIHTMNTLGEIGIQFSLDDFGTGYSSLQYLKMLPLSQLKIDQSFVRDLATDNSNKTI 908 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 V I+ +A +L L VIAEGVE+ ++ L +G QG+ F++P+ F Sbjct: 909 VLTIITMAHSLGLNVIAEGVETDEQLQLLNAHGCGNYQGYYFSEPLSINEF 959 >UniRef50_Q21R50 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Rhodoferax ferrireducens T118 RepID=Q21R50_RHOFD Length = 1052 Score = 883 bits (2283), Expect = 0.0, Method: Composition-based stats. Identities = 190/665 (28%), Positives = 311/665 (46%), Gaps = 21/665 (3%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 + ++ L + + L T L L + + + Sbjct: 396 ITKANQRMATLFGYPLHELQGMEYVALVHPAQRETGRKNMLALLDSALQSVDLERLYWRA 455 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 D+++ HL G++ R L A + Sbjct: 456 -------DQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQRRQTEAELRIAAIAFE-SEQ 507 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 + I D +G + R NR TG + +GQ+ L S R AA A Sbjct: 508 GMAITDPQGVMLRVNRAFSAITGYSAPEAVGQNPR-LLSSGRHDAAFYAAMWDSLVREGA 566 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 ++ E+W G+ + + + TD++ + A+++++ LA D++ Sbjct: 567 WQGEIWNRRKNGEVFPEWLTISAVKDPAGQATHYVATFTDLSTRKSAEDQIKSLAFYDTL 626 Query: 243 TGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 TGLPNR + D + A+ + ++Y+DLD+FK +N+ YGH GDQLL++V+ + Sbjct: 627 TGLPNRRLLLDRLKQALASGARHRRQGALLYIDLDDFKTLNNTYGHDVGDQLLQEVAQRL 686 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTS------QSALEAMASRILTRLRLPFRIGLIEVYT 354 L +ARPGGD F+VL S + E +I L P++I + Sbjct: 687 SHYLRAGDTVARPGGDSFVVLLEALSTNSVEAATEAENTGEKIRLALSQPYQIADHAHRS 746 Query: 355 SCSVGIALSPE-HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNL 413 + S+G+ L + ++ A+ AMY AK GR F P+M V L+ +L Sbjct: 747 TASIGVTLFDDRQQEGIDEPLKRAELAMYQAKTAGRNTLRFFDPQMQTAVMAMAALEADL 806 Query: 414 RKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGR 473 R+A+ ++Q +++YQ +++ +V +EALVRWQ P RGL+PP +FI AE++GLI+PLG+ Sbjct: 807 REAVRSNQFLLYYQAQVSGERQVAGVEALVRWQHPVRGLVPPAEFIPLAEQTGLILPLGQ 866 Query: 474 WVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVEL 531 WV+ Q+A W + + +L VAVN+SA Q + L+ + +EL Sbjct: 867 WVLETACAQLAAWASQPERAHLTVAVNVSALQFHQADFVAQVLAALKRAGANPQRLKLEL 926 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TES L+ + E ++ + + G LDDFGTGYSSLS L R P++ +K+DQ FVRDI Sbjct: 927 TESLLVHDAEDVIAKMITLKEQGVGFSLDDFGTGYSSLSYLKRLPLNQLKIDQGFVRDIL 986 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 ++ + +VA+A L L VIAEGVE+ + FL G + QG L+++ +P AFE Sbjct: 987 HDANDAAIAKMVVALADTLGLSVIAEGVETEAQRDFLAAQGCHAYQGHLYSRALPIDAFE 1046 Query: 652 RWYKR 656 + ++ Sbjct: 1047 AFMRQ 1051 Score = 91.1 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 52/181 (28%), Gaps = 3/181 (1%) Query: 54 IREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA 113 I+ + L + + E ++ Sbjct: 320 IKRQLAPLLATARRLAAMADEKQALRALPVTHPDEIGQVVKGFNRLLGTLGQREA---LL 376 Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN 173 +Q++ + AI ++D +G I + N+ G H++ G L + + Sbjct: 377 QQILDTSSVAIFLVDRQGRITKANQRMATLFGYPLHELQGMEYVALVHPAQRETGRKNML 436 Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + + + ++E + E L+ DIT+ R+ + L Sbjct: 437 ALLDSALQSVDLERLYWRADQTEFWGHLTGQRFVDGNGEEQGLVGVIADITQRRQTEAEL 496 Query: 234 R 234 R Sbjct: 497 R 497 >UniRef50_Q3SIW6 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q3SIW6_THIDA Length = 1212 Score = 883 bits (2283), Expect = 0.0, Method: Composition-based stats. Identities = 205/597 (34%), Positives = 311/597 (52%), Gaps = 7/597 (1%) Query: 68 LTVDESDLSVHLVGRKINKREWAGNAS-AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 L D +H G + AS + L + + AI+I Sbjct: 615 LLPDGRVKWLHGRGETRYGKNGDPIASCGTVQDITARKKQEDALRLYASIFEHSGEAILI 674 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D +I N + TG D+ G+ L + + S R+ ++ E Sbjct: 675 ADQARHIIAVNPAFTNLTGYALDDIRGEEPTIL-AGGQASEESYRSTWASLEQTGYWQGE 733 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 + G + V + + S TDITE + A+ +++ LA D +TGL Sbjct: 734 IIDRRKDGTLYPKWMAVSVVRDADGVLTHYVASFTDITERKLAEAQIKHLAYHDPLTGLS 793 Query: 247 NRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR ++Q +D + A + + VV+LDLD FK +ND+ GH GDQLL +V+ + + Sbjct: 794 NRFSLQTQLDQTLALARREQRTLAVVFLDLDRFKSINDSLGHALGDQLLVEVARRLRDNV 853 Query: 305 EHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 ++AR GGDEF+V+ + +A +A ++L L +RIG ++T+ S+GI+L Sbjct: 854 RDSDIVARLGGDEFVVVLTEVGDAAGAARVADKLLGALVPRYRIGGHALHTTASIGISLY 913 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P G D+ A++++ADTAMY AK GR FTPEMNQ V + L D +LR A+E Q Sbjct: 914 PHDGDDADALMKNADTAMYHAKSQGRDNVQFFTPEMNQSVLKRLQFDHDLRVAVEAGQFE 973 Query: 424 IHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 +HYQP+I G V +EALVRWQ P GL+ P +FI AEE+GLI+PLG WV+ + RQ Sbjct: 974 LHYQPQINSTSGRVVKVEALVRWQHPREGLVSPAEFIPIAEETGLILPLGEWVLNEACRQ 1033 Query: 483 VAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 + WRD GI +L VAVN+SA QL + + + L E + +E+TES + + Sbjct: 1034 LRLWRDAGITDLTVAVNLSAHQLHSPALIPMVARTLGNHGLEGADLCLEITESVAMRDTT 1093 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 +++ +Q LG + +DDFGTGYSSLS L PID +KLDQ FV +I P ++ Sbjct: 1094 ASIAQLQALRDLGIHLSIDDFGTGYSSLSYLKLLPIDTLKLDQSFVCEIEFNPSDVAICA 1153 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 A +A+A +L L+V+AEG+E+ + L + + QG+LF+ P+PA + + Sbjct: 1154 ATIALAHSLGLEVVAEGIETETQRRLLASHRCDFMQGYLFSAPLPAERALAYIREQQ 1210 Score = 82.2 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 61/192 (31%), Gaps = 4/192 (2%) Query: 47 SAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDL 106 +A + L + D D L + + + R Sbjct: 340 RPIRAMTRVADQIAAGDLRQRVPQDGGDELGRLAAAFNRMADTLAASYDNLEAEVEKRSR 399 Query: 107 SHGL--SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 + ++ A + +V+LD G I+RFNR CE T +V G+ V+ Sbjct: 400 ELRELSALQGAILEHAGALVVVLDREGRIRRFNRACEALTQYSFSEVEGRQVWDFIPPEE 459 Query: 165 EAAASRRNNRVFFRSGNAYEVELWI--PTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 V F L G R + + V + F++ G D Sbjct: 460 RRIVQDEAFAVLFNDPEQSRSTLTNHWVARDGGRRLIEWSNSVLHDAQGKVEFVVAVGND 519 Query: 223 ITEERRAQERLR 234 +T++ RA+ L+ Sbjct: 520 VTDKMRAEAALK 531 Score = 48.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 27/237 (11%), Positives = 61/237 (25%), Gaps = 11/237 (4%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLS---AEQAARIREMTVI 60 +R L ++ D + EQ+ + Sbjct: 428 IRRFNRACEALTQYSFSEVEGRQVWDFIPPEERRIVQDEAFAVLFNDPEQSRSTLTNHWV 487 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 L + + G+ + + A ++ L A+++ A Sbjct: 488 ARDGGRRLIEWSNSVLHDAQGKVEFVVAVGNDVTDKMRAEAALKESESRLKEAQRI---A 544 Query: 121 HSAIVILDS-RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR--RNNRVFF 177 LD G + + + + GQS + + Sbjct: 545 QVGSWALDLVTGKLIWSDEMF-RIFE-TDEAAFGQSYEAFLDALHPEDREHVNKAYMHSV 602 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + Y++ + G+ +L G + I + DIT ++ ++ LR Sbjct: 603 TNHTPYDLVHRLLLPDGRVKWLHGRGETRYGKNGDPIASCGTVQDITARKKQEDALR 659 >UniRef50_Q478F7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q478F7_DECAR Length = 739 Score = 883 bits (2282), Expect = 0.0, Method: Composition-based stats. Identities = 184/671 (27%), Positives = 302/671 (45%), Gaps = 22/671 (3%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAE--------QAARIR 55 + + + P + + +L E + R + Sbjct: 51 ISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACARLYSCEPDGTPPAGFGVFISRL 110 Query: 56 EMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNAS-AWHDTPAVARDLSHGLSFAE 114 ++ + + + D S L V L + + + R + H L A Sbjct: 111 KLKIRDEADWTYVRKDGSHLPVSLAVSVLRDAKGGVQGYLGIASDISERRRMEHDLRIAA 170 Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 + +AI++ D I R N+ TG + IGQ+ L R++A Sbjct: 171 IAFE-SQAAIMVTDVNQRILRVNQAFTKLTGYSAEEAIGQTPGMLKSGRQDAD-FYAAMW 228 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 ++ E+W G+ + + + +DI+ + A+ + Sbjct: 229 CSLGQCGHWQGEIWNRRKNGEIFPEWLTISGVRDGRGKVTHYVSTFSDISNLKVAESEIH 288 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQL 292 LA D +T +PNR + + +D A A + ++ +D+D+FK +ND GH GD L Sbjct: 289 HLAFYDPLTAMPNRRLLLNRLDQACVSAKRSGQFGALLIIDIDHFKTLNDTLGHDVGDHL 348 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA------LEAMASRILTRLRLPFR 346 L +V+ + +C+ AR GGDEF+V+ E +A +I L P+ Sbjct: 349 LVEVARRLSACIREGDTAARQGGDEFVVMLEELGSEQEGAAVQAEIVAEKIRLELARPYL 408 Query: 347 IGL-IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 + E + S S+GI+L +++ AD A+Y AK+ GR F M + E Sbjct: 409 LNGDTEYFRSASIGISLFFGQEKTIDILLKQADIALYKAKDAGRNAIRFFDTAMQTTLDE 468 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEES 465 L+ LR+AL D+ V++ QP++ + EAL+RWQ P R ++ P DFI AEE+ Sbjct: 469 RAELEAGLRRALVRDEFVLYVQPQVDAVRRLIGAEALLRWQPPGRAMVAPNDFIPLAEET 528 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGIN--LRVAVNISARQLADQTIFTALKQVLQELNFE 523 GLIVP+G WV+ ++ +W D + L ++VN+SARQ + L Sbjct: 529 GLIVPIGIWVLDQACAELRRWADDPRSASLFLSVNVSARQFRQADFVAQVADALARHGAN 588 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 + +ELTES L++N E + +Q +G + LDDFGTGY+SLS L RFP + +K+D Sbjct: 589 PRLLKLELTESLLLDNVEEVIEKMQALRTIGVRFSLDDFGTGYASLSYLKRFPFEQLKVD 648 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 + F+RDI+ P ++VRAI+A+ L L V+AEGVE + A+L K+ + QG+LF + Sbjct: 649 RSFIRDININPDDAAIVRAIIAMGNTLRLSVVAEGVEDDLQHAYLVKHECSLFQGYLFGR 708 Query: 644 PMPAVAFERWY 654 PM F Sbjct: 709 PMSFDDFRASL 719 Score = 96.5 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 40/139 (28%), Gaps = 23/139 (16%) Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF-------------- 160 + A AI++ + G I FNR + G +V+G+ LF Sbjct: 33 SIFEHAGRAIILTNPDGLISYFNRAAQQMLGYTPEEVVGRETPLLFHLADEISACARLYS 92 Query: 161 --MSRREAAASRRNNRVF---FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 A R + G L + V + Sbjct: 93 CEPDGTPPAGFGVFISRLKLKIRDEADW----TYVRKDGSHLPVSLAVSVLRDAKGGVQG 148 Query: 216 LICSGTDITEERRAQERLR 234 + +DI+E RR + LR Sbjct: 149 YLGIASDISERRRMEHDLR 167 >UniRef50_A0L2H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=12 Tax=Bacteria RepID=A0L2H7_SHESA Length = 1228 Score = 883 bits (2282), Expect = 0.0, Method: Composition-based stats. Identities = 197/655 (30%), Positives = 327/655 (49%), Gaps = 13/655 (1%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + + + L P R EQ R+++ Sbjct: 582 INQAFMEITGYTLEELQAIDPWEL--------TPIRYQSSETEQLERLKQTRRYGPYQKH 633 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 D ++V L G + + ++ QV ++ I I Sbjct: 634 YRHKDGQLVAVRLNGSLVTAANGEQLILFIVEDITEQERTVARVNLLAQVFQQSGEGITI 693 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 +D+ I N TG ++IG++ L R + R ++ E Sbjct: 694 MDANDIIVDVNSAFTQITGYSRDEIIGKNCRFLEA-ERTDRSIDAQVRAALEQTGFWQGE 752 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 +W +G + + I S TDI+E + +ER+ LA+ DS+T LP Sbjct: 753 VWDRHKEGFDFPKWLMMSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLP 812 Query: 247 NRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR ++Q ++ A ++ V+++D+D+FK +ND GH GD LL +V+ + + + Sbjct: 813 NRLSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIM 872 Query: 305 EHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSP 364 +D ++AR GGDEF+V+ S+T + +A + + L + I +++S S+GI+L P Sbjct: 873 GNDDIVARLGGDEFVVVLSDTDHDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFP 932 Query: 365 EHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVI 424 G A++++AD AMY AK GR + FT MN V E ++T LR+A+ ++L++ Sbjct: 933 TDGDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLL 992 Query: 425 HYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQV 483 +YQP++ G+V +EAL+RWQ PE GL+ P FI AEE +I+P+G+WV+ + + Q+ Sbjct: 993 YYQPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQL 1052 Query: 484 AKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDEL 542 A+WRDKG LR+AVN+SA QL TI + VL + +++E+TES ++ E Sbjct: 1053 AEWRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQ 1112 Query: 543 ALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRA 602 ++ + Q G ++ +DDFGTGYSSLS L P+D +KLD+ FV+DI P ++ A Sbjct: 1113 NAKLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAA 1172 Query: 603 IVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 +++A L L V+AEGVE+ + L+ G + QG+ F+KP+ A R+ +R Sbjct: 1173 TISMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPLAADDCFRFIERN 1227 Score = 76.5 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 45/131 (34%), Gaps = 3/131 (2%) Query: 108 HGLSFAEQVVSEAHSAIVILDS-RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 + +A + G N+ + TG ++ ++L R ++ Sbjct: 553 ESEQRYRTLFDKAPVGHALKRLEDGQFVAINQAFMEITGYTLEELQAIDPWELTPIRYQS 612 Query: 167 AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEE 226 + + + ++ + GQ + + N + + + ++ DITE+ Sbjct: 613 SETEQ-LERLKQTRRYGPYQKHYRHKDGQLVAVRLNGSLVTAANGE-QLILFIVEDITEQ 670 Query: 227 RRAQERLRILA 237 R R+ +LA Sbjct: 671 ERTVARVNLLA 681 >UniRef50_A1STH5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Psychromonas ingrahamii 37 RepID=A1STH5_PSYIN Length = 962 Score = 881 bits (2279), Expect = 0.0, Method: Composition-based stats. Identities = 192/658 (29%), Positives = 329/658 (50%), Gaps = 15/658 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 S+ + + L + + + L + + D L+ + + + Sbjct: 296 SSEILDELFGIDQSYNHSTEGWTLIVHPDDRIKMDDYLKNEV-----LAKGKPFDKEYRI 350 Query: 67 SLTVDESDLSVHLVGR-KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 D+S +H +G+ + + + S L V ++ ++IV Sbjct: 351 VRQTDQSIRWLHGLGKLEFDNDGLPVKMVGTVQDITEQKRASDSLLKLSLAVEQSPNSIV 410 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I D G I+ N + TG +V+GQ+ L + + G+ + Sbjct: 411 ITDLDGKIEYVNNMFIKVTGYSRDEVLGQNPRILKSGKTPQTTF-KEMWAHLTRGDIWHG 469 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+ + + DITE+++A+ LA D +TGL Sbjct: 470 EIINRRKDKSIYIESATITPVKQADGKITNYVAIKEDITEKKKAEAYTENLAYFDQLTGL 529 Query: 246 PNRNAMQD----LIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 PNR +Q ++ + +++ + V++LDLDNFK +ND+ GH GDQ+L ++ I Sbjct: 530 PNRRMLQAQVKYRLN--MAQSNHQPLTVMFLDLDNFKNINDSLGHTVGDQVLIKIAKRIK 587 Query: 302 SCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 + ++R GGDEF++L NT +A +A+ ++ + + E+ + S+GIA Sbjct: 588 KAIREVDTVSRLGGDEFIMLFPNTDANAAMHIATTLIQEISKASVVEHNELTITPSIGIA 647 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 + P G+D ++++A+TAMY K R F TPEM L L+ LR AL+ ++ Sbjct: 648 IYPNDGNDFKTLLKNAETAMYRVKNDSRNGFHFVTPEMQLSASRNLQLENALRHALKRNE 707 Query: 422 LVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 L ++YQP+I+ G++ EAL+RW PE G+I P +FI AE SG I+ +G WV+ + Sbjct: 708 LQLYYQPQISTSNGQIIGAEALLRWHHPELGMISPAEFIPIAESSGQIIEIGEWVLRTAI 767 Query: 481 RQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 RQ W D G + +AVN+S Q + + T + +L E+ +++ELTE+ + + Sbjct: 768 RQTKNWMDDGFTPMIIAVNLSVVQFRQKNLLTLITDILAEVQLPNEYLELELTEAVTMHD 827 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 E ++V+ F + G ++ +DDFGTGYSSLS L +F + +K+DQ F+RDI P +++ Sbjct: 828 PESVINVMNTFHEQGIRMSIDDFGTGYSSLSYLKKFKVYKLKIDQSFIRDISNDPDDRAI 887 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 V AI+ +A L LQ IAEGVE+A++ AFL +G +E QG+ F+KP+P+V FE++ + Sbjct: 888 VSAIIDMASNLGLQTIAEGVETAEQLAFLRLHGCHEVQGYYFSKPLPSVEFEQFRHNH 945 >UniRef50_C5V7A4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Gallionellaceae RepID=C5V7A4_9PROT Length = 1013 Score = 881 bits (2278), Expect = 0.0, Method: Composition-based stats. Identities = 192/596 (32%), Positives = 300/596 (50%), Gaps = 13/596 (2%) Query: 71 DESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR 130 L + V + G + + L A A ++I D Sbjct: 421 RAHLLEMTRVRLHDSANNVTGLI-GLAADITERQKVESELRIAAAAFE-AQEGMLITDRH 478 Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIP 190 I R N+ TG +V+G++ L R + A ++ +E E+W Sbjct: 479 NVIMRVNQAFTSITGYLAEEVLGKNPCFLASGRHD-AGFYQSMWEGLNEKGKWEGEVWNR 537 Query: 191 TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNA 250 G+ + + + DIT + A+ ++ LA D +T LPNR Sbjct: 538 RKDGEIYPEYLLISAVKDIKNEVANYVATFRDITANKAAESEIKKLAFYDPLTLLPNRRL 597 Query: 251 MQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQ 308 + D ++HA+ + N+ ++++DLDNFK +ND GH GD LL+ V+L + SC+ D Sbjct: 598 LTDRLNHALASSARNRNIGALLFIDLDNFKTLNDTLGHDMGDALLKQVALRLKSCIREDD 657 Query: 309 VLARPGGDEFLVLASNTSQ------SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 LAR GGDEF+V+ N S+ + E + +IL L + + E + + S+G+ L Sbjct: 658 TLARLGGDEFVVILENLSELAMDAATKAELIGEKILAALNQVYPLASQEYHGAASIGVTL 717 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 H +++ AD AMY +K+ GR F + + + E L+ LRKA++ QL Sbjct: 718 FAGHALSIDELMKQADIAMYQSKKSGRNTLRFFDLDTQKIINERAELEIELRKAVDKKQL 777 Query: 423 VIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 +HYQ ++ G S EAL+RW P RGLI P FI AE++GLI+P+G+WV+ Q Sbjct: 778 HLHYQIQLNSVGTPLSAEALIRWVHPVRGLISPAHFIPLAEDTGLILPIGQWVLDTACAQ 837 Query: 483 VAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 + W+D+ +L +AVN+SA+Q + +K+ +Q + +ELTES L+EN Sbjct: 838 LHSWQDERFTQDLTLAVNVSAKQFHQKNFVALVKETVQRHAINPKLLKLELTESMLVENI 897 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 E + + ++G Q LDDFGTGYSSL L R P++ +K+DQ FVR++ +++V Sbjct: 898 EDIIVTMNALREMGIQFSLDDFGTGYSSLQYLKRLPLNQLKIDQSFVRELSSSSSDRAIV 957 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 R IVA+A++LNL VIAEGVE+ ++ L G N QG+LF KPMP + R Sbjct: 958 RTIVAMAESLNLNVIAEGVETEEQHTLLQDIGCNYYQGYLFGKPMPIEQLDAILAR 1013 Score = 75.3 bits (185), Expect = 8e-12, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 72/239 (30%), Gaps = 16/239 (6%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 + + L L + P T L+ ++ + + + Sbjct: 231 VITYCNARFAELIGCPVAQVNGLD---LYNLSDNAVLPALTAALAGDRGYFEGQYQAVFN 287 Query: 63 SLMMSLTV------DESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQV 116 +++T + + + I++R+ A A A + + + + Sbjct: 288 DGWIAMTCAASCDARGNVIGGIAIVESIHERKMAEMALALSN-----QKHDEERKLFQTI 342 Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ-SVFKLFMSRREAAASRRNNRV 175 + + +L G I+ N + G+ HD L + Sbjct: 343 LDNLPLGMWMLGVDGKIKFVNETFCNALGIAAHDFFDAGHYSDLLPLSIADKCKESDRAC 402 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 F + Y E W+P G+ L + S N LI DITE ++ + LR Sbjct: 403 FMQGEPHYSTE-WLPFTDGRAHLLEMTRVRLHDSANNVTGLIGLAADITERQKVESELR 460 Score = 66.4 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 7/157 (4%) Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 L +V ++ R N H+ ++ +++ + I D I Sbjct: 173 YLGFLMVSLRLINRNLIENIRMRHEGELREAAMNVSKERYRLLLAHSPVGIFHYDLNFVI 232 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 N + G V G ++ L + A +E + Sbjct: 233 TYCNARFAELIGCPVAQVNGLDLYNLS----DNAVLPALTAALAGDRGYFEGQYQAVFND 288 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 G ++ + N I I I E + A+ Sbjct: 289 G---WIAMTCAASCDARGNVIGGIAIVESIHERKMAE 322 >UniRef50_Q7P0M4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7P0M4_CHRVO Length = 633 Score = 879 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 203/599 (33%), Positives = 317/599 (52%), Gaps = 8/599 (1%) Query: 69 TVDESDLSVHLVGRKINKREWAGNAS--AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 T D S + +N+ + G+A A + R L A QV ++ AI+I Sbjct: 31 TQDGEGESERYLEVTVNQLNYQGDAYLCATARDISGRRQTERQLRLAAQVFESSNEAILI 90 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D I NR TG E +V G LF R E A ++ + + E Sbjct: 91 SDPDNRILTVNRAFGHITGYGEAEVRGSKASMLFSDRHEPAFFQQ-MWQTLQQRGQWSGE 149 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 +W G+ + N V + TDI+E + + R++ +A D++T LP Sbjct: 150 IWNRRKSGEHFPCWVNISVLQDGQGEISHFVALFTDISERKEQEARVQHMAEYDALTDLP 209 Query: 247 NRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR + D + AI A +N++ V+++DLD+FK +ND GH GD+LL++V+ + + Sbjct: 210 NRVLVNDRLHQAIRQAELQHNQLAVLFVDLDHFKNINDTLGHCAGDELLKEVARRLAGAV 269 Query: 305 EHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 + R GGDEF+++ + +Q +A RIL ++ PF+IG + CS+GI+L Sbjct: 270 RGLDTVGRTGGDEFVLILPSINQPGEAAQIAERILRTIQQPFQIGEHSLVVGCSIGISLM 329 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P+ GSD ++ +AD AMY AK GR F +T EMN +V E L ++ LR+A+E +QL Sbjct: 330 PDDGSDIQTLLMNADLAMYHAKAHGRNTFRFYTREMNTQVAERLLMENRLRRAMEQEQLY 389 Query: 424 IHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 + YQP+ G + EAL+RW+ P+ GLI P FI AE++GLIVPLGRWV+ RQ Sbjct: 390 LVYQPQYDMAGQRLLGCEALLRWRDPDEGLIMPGRFIPVAEDTGLIVPLGRWVLDQACRQ 449 Query: 483 VAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 + W G+ +RVAVN+SA QL +++ LQ +++E+TES L+ + + Sbjct: 450 ASLWLRAGLEPMRVAVNVSAHQLMRHDFIDDVREALQRHALPGHCLELEVTESTLMADAD 509 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 LA + +G ++ +DDFGTGYSSL+ L RF D +K+D+ F+ D+ + ++V Sbjct: 510 LASRQLAVIKAMGVRLAIDDFGTGYSSLAYLKRFAPDLVKIDRSFISDLPGDEENAAIVS 569 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 AIV +A AL ++ +AEGVE+ + FL G QG+L P+ R ++ +R Sbjct: 570 AIVHLAGALGMETLAEGVENENQQRFLQTLGCEAMQGYLLGSPLAEEMMTRRLEQQQRR 628 >UniRef50_C4K931 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4K931_THASP Length = 855 Score = 879 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 197/583 (33%), Positives = 306/583 (52%), Gaps = 6/583 (1%) Query: 73 SDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGN 132 +S + + A L AE+V+ + +++ D+ Sbjct: 266 DLVSFKDILSGMELAYVHELHDALRARDLALSASQRDLYLAEKVIESSLEGVMVTDAHAR 325 Query: 133 IQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTC 192 I N TG +V+G + L R+ A R G ++ E+W Sbjct: 326 ILSVNPAFTRMTGYAPEEVVGLNPSVLNSGRQSPAFYARMWDGLLGDGQ-WQGEVWNRRK 384 Query: 193 KGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQ 252 G+ + TDI+ + + R+R LA D +TGLPNR + Sbjct: 385 TGEVYPQLLHITAIRDREGVLTHYAALFTDISRLKETEARIRDLAYYDPLTGLPNRRLLD 444 Query: 253 DLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVL 310 D + + HA ++ V+++DLD FK++ND+ GH GD+LL +++ + + L D + Sbjct: 445 DRLQVELAHAARLRCRLAVMFVDLDRFKRINDSLGHAVGDKLLVEIAARLRASLRDDDTV 504 Query: 311 ARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSD 369 AR GGDEFLV+ +N S MA R++ LR P + E+ + SVG+A+ P+ D Sbjct: 505 ARMGGDEFLVVLNNLSGPDEAATMARRMVAELRRPVNVEGRELVVTTSVGVAVYPDDSRD 564 Query: 370 STAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK 429 + +++HAD AMY AK+ GR F +F P MN R E L L+T L +AL D+L +++QP Sbjct: 565 ADTLVKHADVAMYRAKDEGRNSFQLFEPAMNARSLERLALETALHRALPRDELQLYFQPV 624 Query: 430 ITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD 488 + G E+ ++EAL+RW+ P+ GL+ P DFI AE++GLIVP+G WV+ +W + Sbjct: 625 MKAEGGELVAVEALLRWRHPDLGLVSPADFIPLAEDTGLIVPIGEWVLRSACEHHRRWCE 684 Query: 489 KG-INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVI 547 G L + VNISARQ ++ + VL E + +ELTES L+++ + AL+ + Sbjct: 685 AGGAPLHMMVNISARQFREEGFAAMVGSVLAETGMTPGDLTLELTESMLMDDTDRALARL 744 Query: 548 QQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVA 607 LG + +DDFGTGYSSL+ L RFPID +K+D++FVR I + +LV AIV++ Sbjct: 745 DHLRALGVCLAIDDFGTGYSSLAYLKRFPIDELKIDRLFVRGIDRNTRDAALVSAIVSLG 804 Query: 608 QALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 +L L+V+AEGVE+A L + G + QGF F+ P+P F Sbjct: 805 HSLGLRVVAEGVETAAHLDVLRRQGCDLAQGFHFSPPLPWEEF 847 >UniRef50_C6WVK9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVK9_METML Length = 1329 Score = 879 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 181/588 (30%), Positives = 313/588 (53%), Gaps = 6/588 (1%) Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 + L + N + AW D L +V + IVI D I Sbjct: 744 WIEDQLTLTRDNNGKPLEIVGAWLD-ITDRLSAEEKLRLNAKVFESSRDGIVITDKNNKI 802 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 N TG + +V+G++ L + E + ++ E+ Sbjct: 803 ISVNNAFTTITGYEAKEVVGKNPHMLASEKLE-ESFYSAMWDSIGVMGYWQGEVINQRKN 861 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G+ + + + I +DI+E + A+ER++ L+N D +T LPN+N + D Sbjct: 862 GEIYTQWLSISTIKDADGKISQHIGIISDISERKVAEERIQFLSNFDPLTNLPNKNLLND 921 Query: 254 LIDHAINHADNNKVGV--VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 A+ A K V +++DLD FK +N++ G GDQ++++++ ++ + + + Sbjct: 922 RTKLALATAKRLKTAVTLMFVDLDRFKFINESLGPSIGDQVVKELAERFVAYMRPEDTVC 981 Query: 312 RPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDST 371 R GGDEF++L NT +A ++L + PF ++ + S+GI+ P+ G Sbjct: 982 RQGGDEFILLLPNTDAEGAAHVAKKLLDIVAQPFNFHGQKIVLTASIGISAYPQDGESFE 1041 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 + + AD A+Y AK GR F F +M+++ + L L++ LR A+E+++ +++YQP+ Sbjct: 1042 QLAQSADAALYRAKYEGRNNFQFFARQMHEQAHDILLLESELRSAIEHEEFLLYYQPQYD 1101 Query: 432 W-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 ++ LEAL+RWQ PE+GL+ P FI AEESGLI +G WV+ V+Q+A W++ G Sbjct: 1102 SKTSKIIGLEALIRWQHPEKGLVSPAVFIPIAEESGLIAEIGDWVLRTAVKQLASWQEAG 1161 Query: 491 IN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 + + VAVN+S Q T++ ++ Q+L++ + +++ELTE +E+ E L+V+ Q Sbjct: 1162 LGAVPVAVNLSVVQFHQDTLYGSVCQILRDTKVDPSMLELELTEGIAMEDSERTLNVLNQ 1221 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 + LG ++ +DDFGTGYSSLS L +F ID +K+DQ FVR I P +++ AI+++A++ Sbjct: 1222 LNSLGVRLSIDDFGTGYSSLSYLKKFKIDKLKIDQSFVRGIGSHPQDAAIITAIISMAKS 1281 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 L+ + IAEGVE+ ++ FL N +E QG+ F+KP+P+ + Sbjct: 1282 LSFKTIAEGVETLEQLNFLIANSCDEIQGYYFSKPLPSTEVTKLLANQ 1329 Score = 93.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 47/134 (35%), Gaps = 12/134 (8%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG-QSVFKLFMS 162 R L+ +++ +A +++LD + N + G ++ +++G + L + Sbjct: 348 RQLAES--RYQKLFDQASDGVLVLDHQHQFIAANLAATNMLGYQQGELLGMRLPDVLINN 405 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 + N + + ++ G R N + + D Sbjct: 406 VTKHPEFNTNLISDIPTKDEWQY----RRKDGSRFIAEVNCRKLDKN-----YYFTIIRD 456 Query: 223 ITEERRAQERLRIL 236 +TE + A+ R+ L Sbjct: 457 LTERKLAENRILHL 470 Score = 55.3 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 9/153 (5%) Query: 93 ASAWHDTPAVARDLSHGL----SFAEQVVSEAHSAIVIL--DSRGNIQ--RFNRLCEDYT 144 A D + L L Q+V+ + + I L ++ G + T Sbjct: 632 ALDNFDREQKKQKLMSELDYANKRINQIVNLSPAVIYTLKPNAEGIFHSDFISENIYQIT 691 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G + + + + F L E A+ +++ + + G +++ Sbjct: 692 GYAKDEWL-KDNFWLDHIHTEDLAAALDSKKILFETGSLNHQYRFMHANGGYIWIEDQLT 750 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + + + ++ + DIT+ A+E+LR+ A Sbjct: 751 LTRDNNGKPLEIVGAWLDITDRLSAEEKLRLNA 783 >UniRef50_Q5P4W8 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q5P4W8_AZOSE Length = 1039 Score = 877 bits (2268), Expect = 0.0, Method: Composition-based stats. Identities = 204/657 (31%), Positives = 317/657 (48%), Gaps = 19/657 (2%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 + E+ ++P + + E R + A + R + Sbjct: 382 IVEANAKACEYYGYDPVSLTRMKIEDINVPGREPL---RFEMVQARKPDTFRCCHRLAGG 438 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 + + V S + + + + + A V + Sbjct: 439 QLRDVEVASSPIEI----------AGRKLLYSIVRDVTERKRFEERMRQAMVVFKASSQG 488 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 I+ D++G I N TG +VIG+ R EA ++ Sbjct: 489 IMTTDAQGVITSVNPAFCTITGYLAAEVIGRKSSMFKPERHEATFF-DAMWTSIVESGSW 547 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E+W G R + + + +DITE ++ + + AN D +T Sbjct: 548 AGEVWSRRSDGDRYPQWVTITAVRDTDGRIAEYVTLFSDITERKQQEVAMWRQANFDPLT 607 Query: 244 GLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 GL NR+ +QD +D A+ HA + KVG+++LDLD FK +ND+ GH GD+LL DV+ + Sbjct: 608 GLANRSLLQDRLDRALAHARRHGCKVGLLFLDLDGFKWINDSLGHDVGDELLVDVARRLN 667 Query: 302 SCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 SC+ + +AR GGDEF V+ + ++ L A+A +++ LR PF + + S SVGI Sbjct: 668 SCVRDEDTVARLGGDEFTVVVHDLADRADLGAIADKLVAVLREPFALRGARHHISGSVGI 727 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 + P+ G D ++R+AD AMY AK+ G+ + + P M + L+ +LR A+E Sbjct: 728 TVFPDDGDDVQTLLRNADIAMYKAKQAGKNRAQPYAPHMQADALARVHLEADLRMAVEQR 787 Query: 421 QLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 +HYQP + G + EAL+RW+ PERG+I PL+FI AEE GLIVP+G WV+ +V Sbjct: 788 AFELHYQPIVDCASGALVGAEALIRWKHPERGMISPLEFIPVAEECGLIVPIGEWVLREV 847 Query: 480 VRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 VRQ W +G LR+ +N+S Q + + ++ +L E + E+TES L+ Sbjct: 848 VRQRRDWLARGHPPLRLTLNVSGVQFREAGLPELVRTLLAEFGTARSSLVFEITESVLMG 907 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 E + + + G LDDFGTG+SSLS L RFP+D +K+D+ FVRD + Sbjct: 908 GSENVEARMCDIKEQGICFALDDFGTGFSSLSYLKRFPVDIVKIDRSFVRDCPDDRNDAT 967 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 LV AI+ +A +L L+V AEGVESA++ FL G + QG+L KP+ A AFE Sbjct: 968 LVEAIINMAHSLGLRVTAEGVESAEQREFLRALGCDYLQGYLIGKPLAADAFEALMA 1024 Score = 168 bits (426), Expect = 9e-40, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 69/230 (30%), Gaps = 5/230 (2%) Query: 5 RESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSL 64 + + S VL + L L+A + ++ Sbjct: 6 EYVRQRRPLVVGIVVFLVAAMVSGVLVLGL-GHPGDNLGLSLNAAVVLLFSLLLGGLANQ 64 Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 M L +DL + R E + +VA L + + ++I Sbjct: 65 MAQLRAHRADLQRLVAAR---SAEVRAREAELDRAQSVAHVGEQQLRKLSTAIECSPASI 121 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 VI D G I+ N E TG +V+G++ L R +A G+ + Sbjct: 122 VITDRSGTIEYVNPQFERSTGYTAQEVVGKNPRILKSGNR-SADEYAAMWATITHGHVWR 180 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 E G + + + DIT ++RA+ LR Sbjct: 181 GEFENVRKDGAHYWERASIAPIRADDGMISGFVAVKEDITLQKRAERELR 230 Score = 78.8 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 64/233 (27%), Gaps = 11/233 (4%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + +P LT L T P ++L + Sbjct: 252 QNRCIAEFHAPDPGLLLTPPECFLGRPYARTLPPAVVVKLDEALEEISATGGAKQVEYTL 311 Query: 67 SLTVDESDLSV---HLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 L S L G + + + + + L ++ + + Sbjct: 312 DLPRGRHHFSASVSRLAGSGLVPEGFIVLVRDLTERVRMEQALIESELRYRELFANSRVV 371 Query: 124 IVILDS-RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 ++++D G I N +Y G + + + + RE ++ Sbjct: 372 MLVIDPVDGRIVEANAKACEYYGYDPVSLTRMKIEDINVPGREPLRF-----EMVQARKP 426 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 GQ + +G+ ++ D+TE +R +ER+R Sbjct: 427 DTFRCCHRLAGGQLRDVEVASSPIEIAGRKLLY--SIVRDVTERKRFEERMRQ 477 Score = 59.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 25/232 (10%), Positives = 63/232 (27%), Gaps = 7/232 (3%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQ-AARIREMTVIT 61 T+ + + + ++ +L + D + A + Sbjct: 129 TIEYVNPQFERSTGYTAQEVVGKNPRIL---KSGNRSADEYAAMWATITHGHVWRGEFEN 185 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 + + + ++ + + R+L +++ Sbjct: 186 VRKDGAHYWERASIA-PIRADDGMISGFVAVKEDITLQKRAERELRDREMKLAALIASLP 244 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 + ++D I F+ +G+ + +G Sbjct: 245 DLMFVVDQNRCIAEFHAPDPGLLLTPPECFLGRPYARTLPPAVVVK-LDEALEEISATGG 303 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 A +VE + +G+ F + +GSG I D+TE R ++ L Sbjct: 304 AKQVEYTLDLPRGRHHF-SASVSRLAGSGLVPEGFIVLVRDLTERVRMEQAL 354 >UniRef50_C6WUG6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUG6_METML Length = 836 Score = 877 bits (2267), Expect = 0.0, Method: Composition-based stats. Identities = 180/638 (28%), Positives = 298/638 (46%), Gaps = 15/638 (2%) Query: 26 SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKIN 85 S D L RTL+ S + E + +++ D+ + + I Sbjct: 196 SVDDLVQIDEGKYFSARTLEKSRSVDKSVIERGEDACEEIEAVSDDDKKRTFLQIKTPIY 255 Query: 86 KREWAGNASA---WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 + E ++ L A + I+I D+ +I + N Sbjct: 256 ENEADRKIWGLCGISTDITALKNAETSLRIAATAFESS-DGILITDAGCSILQVNSAFTT 314 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 TG DV+G++ L R + + + + E+W G Sbjct: 315 ITGYSAEDVVGKNPRILSSGRHD-QLFYQALWDRVNTTGTWCGEIWNRRKNGDIYPERIT 373 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA 262 + TDI+E + + E++ LA D +T LPNR + D + A + + Sbjct: 374 ISEVKDKDGKVTNYVSVFTDISESKASSEQIEHLAFYDPLTNLPNRLLLLDRVRQAFSSS 433 Query: 263 DNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV 320 K ++++DLD+FK +ND GH GD LL+ + + C+ +AR GGDEF+V Sbjct: 434 SRTGKKGALLFVDLDHFKVLNDTLGHSTGDLLLKLQAERLSHCVRAGDTVARFGGDEFVV 493 Query: 321 LASNTSQS--ALEAMAS----RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAII 374 + + ++ A+A +IL+ L P + G + ++ S+GI L + ++ Sbjct: 494 VLEDLDRNATEAAAIAEQIGNKILSTLHEPCQFGTHQYQSTSSIGITLFSGDEHEIEDLL 553 Query: 375 RHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG 434 + AD +MY AK+ GR F P M +++ L++ LR A+E QL ++YQ ++ Sbjct: 554 KQADISMYQAKKAGRNTLRFFDPAMQEKLSVRASLESELRYAIEKQQLALYYQVQVDDNQ 613 Query: 435 EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD--KGIN 492 + EAL+RW PERG + P++FI AEES LI+ +G WVI Q+A+W + + Sbjct: 614 RMVGAEALIRWIHPERGTVSPIEFIPIAEESALILDVGHWVINTACMQLAEWAKSVEKKH 673 Query: 493 LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQ 552 L +AVN+SA Q + +Q + + + +ELTES ++E+ + ++ + Sbjct: 674 LMIAVNVSAHQFRALDFVQSTQQAIDLHKIDASRLKLELTESVILEDVDDVIAKMHALKA 733 Query: 553 LGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNL 612 LG ++ LDDFGTGYSSLS L + P+D +K+DQ FVRD+ P +V+ I+ +A + Sbjct: 734 LGVKLSLDDFGTGYSSLSYLKKLPLDQVKIDQSFVRDLAYDPNDAIMVKTIIDLANNFRI 793 Query: 613 QVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 VIAEGVE+ E L G QG+LF +P+P Sbjct: 794 NVIAEGVETELELDILKGYGCRLYQGYLFGRPVPIEQL 831 Score = 57.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 11/190 (5%) Query: 51 AARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGL 110 + T + +M L + V + R A + A + Sbjct: 100 TGVVSFATAVAVWWIMPLALKAPSAQSLQVLNQALARSHAELETRVQQRTAELTSALNQS 159 Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI----GQSVFKLFMSRREA 166 + + + + I D G NR+ D+ D++ G+ + S R Sbjct: 160 HRLSEALDHIPAFVYIKDINGKYVYANRMTLDFFKCSVDDLVQIDEGK-----YFSARTL 214 Query: 167 AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS--GSGKNEIFLICSGTDIT 224 SR ++ G E+ + ++ + K + + L TDIT Sbjct: 215 EKSRSVDKSVIERGEDACEEIEAVSDDDKKRTFLQIKTPIYENEADRKIWGLCGISTDIT 274 Query: 225 EERRAQERLR 234 + A+ LR Sbjct: 275 ALKNAETSLR 284 >UniRef50_C7RK65 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK65_9PROT Length = 1327 Score = 877 bits (2267), Expect = 0.0, Method: Composition-based stats. Identities = 193/655 (29%), Positives = 317/655 (48%), Gaps = 16/655 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + L + + + + + DR E AR+ + + + ++ Sbjct: 680 CNQAFLELIGKSRDEVVGATVYDVAPADLA----DRYKAADDELLARL--GSQVYEARVL 733 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 D+ H G D + + L A V + I I Sbjct: 734 DADGHYRDVIFHKATYGKPGENGGGLVGVMLD-ITERKRMEARLLQAATVFDSSAEGITI 792 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 GNI NR + TG E +VIG++ L ++ + + + E Sbjct: 793 TAPDGNIIAVNRAFTEITGYTEDEVIGRNPRMLQSGFQDRR-FYLDMWQALGTQGRWRGE 851 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 LW GQ + + +DITE RRA ++L A+ D +TGLP Sbjct: 852 LWNRRKDGQTFLESLTISAVKDAQGKVAHYVGVFSDITELRRAHDQLDHQAHHDPLTGLP 911 Query: 247 NRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR + D + A+ A + V ++DLD FK +ND GH GD++L +V+ + + Sbjct: 912 NRLLLGDRLHKALQRAHRDETGLAVFFIDLDRFKNINDTLGHQVGDRVLCEVAWRLGRLM 971 Query: 305 EHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRL-RLPFRIGLIEVYTSCSVGIAL 362 + R GGDEFL++ + + A+ +A +IL L P + E + S+GI++ Sbjct: 972 RESDTVGRLGGDEFLIVIEDVGEPTAVSHIAEKILNVLQASPVTVE-HEFFVGASIGISV 1030 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 P+ G+D+ ++++AD AMY AKE GR + FT ++ Q L ++T+LR+A+E +L Sbjct: 1031 FPQDGADAETLMKNADVAMYRAKERGRNTYEFFTKDLTQTSLARLQMETDLRRAIERGEL 1090 Query: 423 VIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 ++ QP+ + G+V EALVRW P++GL+ P +FI AEESGLIVP+G WV Sbjct: 1091 RVYLQPQFSLATGKVVGAEALVRWLRPQQGLVLPGEFIKLAEESGLIVPIGEWVQGTAAC 1150 Query: 482 QVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Q A W G+ ++VN+S + A I ++ L+ +++E+TES ++ + Sbjct: 1151 QWATWVAAGLAPGVLSVNVSGVEFARGRIQQTARRTLELSGLPARFLELEITESAIMSHA 1210 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 E ++ V+ +G + +DDFGTGYSSL+ L R P++ +K+DQ FVR + ++ Sbjct: 1211 ENSVQVLDNLRAMGISLVIDDFGTGYSSLAYLKRLPLNKLKVDQSFVRGLPNDTEDCAIA 1270 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF-ERWY 654 RA++A+ +L L VIAEGVE+ + FLT G +E QG+L +PMP + R+ Sbjct: 1271 RAVIALGHSLQLTVIAEGVETEAQREFLTGEGCDEMQGYLRGRPMPFDDYHARFL 1325 Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 62/232 (26%), Gaps = 5/232 (2%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + ++ + ++P + +S+ S E QL ++ Sbjct: 281 RIIQRCNPSLERIFGYSPGQLIGQSTRCFFASEEAWREKGERAQLLIDECGSFVGEVQYC 340 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 S + + ++ L + R + L + A Sbjct: 341 KSDGLPIWCR---VTGSLANPGEPGDGLVWLFEDVTEKRQADRAMEALLREQALIFERAP 397 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 + I L IQR N E G ++GQS F S + Sbjct: 398 TGIAFL-RDRVIQRCNPSFERIFGYAPGQLLGQSTRVCFASEAAWREAGERAYAVADESG 456 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + EL G ++ + + D+T R A+E L Sbjct: 457 KFIGELEYCRADGTPIWCQVTGSLL-NPANPAEGYVWLFEDVTARRAAEEAL 507 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 79/238 (33%), Gaps = 13/238 (5%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + ++ + + + P L +S+ V S E A+++ + Sbjct: 406 RVIQRCNPSFERIFGYAPGQLLGQSTRVCFASEAAWREAGERAYAVADESGKFIGELEYC 465 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGL--SFAEQ--VV 117 + D + + + G +N A + R L S EQ + Sbjct: 466 RA-------DGTPIWCQVTGSLLNPANPAEGYVWLFEDVTARRAAEEALVESLWEQQLIF 518 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 A I I R NR CE+ G E + GQ LF S A R Sbjct: 519 DNAMIGI-SYHRNRMILRCNRRCEEIFGYLEGGLAGQPTRVLFASDEAWEAVGRQVYGES 577 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 SG ++ EL G +++ S +E I + D+T +R A++ LR Sbjct: 578 ASGETFDGELLYQRRDGTPIWVHAIGRTIGESADSET-WIWAYADVTAQRAAEQALRQ 634 Score = 109 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 73/240 (30%), Gaps = 9/240 (3%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + ++ + L + + +S+ + S E R + + T+ Sbjct: 156 RIIQRCNRRFAELLGYAADELVGQSTRLYYPSEEAWLETGRRAYAAIAETGIYHGDTIFR 215 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 S ++ ++ R + + A A + L + A Sbjct: 216 RRNGESFCC---HITGSMMNRANPDEGYVWLYEDVSEKRASAAAMDALLREQTLIFEAAP 272 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 I + IQR N E G +IGQS F S ++ Sbjct: 273 IGIAFV-RDRIIQRCNPSLERIFGYSPGQLIGQSTRCFFASEEAWREKGERAQLLIDECG 331 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA----QERLRILA 237 ++ E+ G ++ + G+ L+ D+TE+R+A + LR A Sbjct: 332 SFVGEVQYCKSDGLPIWCRVTGS-LANPGEPGDGLVWLFEDVTEKRQADRAMEALLREQA 390 Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 78/256 (30%), Gaps = 17/256 (6%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTL--------QLSAEQAAR 53 + + + + + + VL S R + E + Sbjct: 531 RMILRCNRRCEEIFGYLEGGLAGQPTRVLFASDEAWEAVGRQVYGESASGETFDGELLYQ 590 Query: 54 IREMTVITSSLMMSLTVDESDLS------VHLVGRKINKREWAGNASAWHDTPAVAR-DL 106 R+ T I + + +D + ++ ++ + A +L Sbjct: 591 RRDGTPIWVHAIGRTIGESADSETWIWAYADVTAQRAAEQALRQSHLELEQRVADRTLEL 650 Query: 107 SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 S L F Q++ + G N+ + G +V+G +V+ + + Sbjct: 651 SQQLHFMRQLIEAIPGPVFYKSQEGRYLGCNQAFLELIGKSRDEVVGATVYDVAPADLAD 710 Query: 167 AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEE 226 + + + E + G + +K + G+N L+ DITE Sbjct: 711 R-YKAADDELLARLGSQVYEARVLDADGHYRDVIFHKATYGKPGENGGGLVGVMLDITER 769 Query: 227 RRAQERLRILAN-TDS 241 +R + RL A DS Sbjct: 770 KRMEARLLQAATVFDS 785 Score = 100 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/239 (14%), Positives = 62/239 (25%), Gaps = 13/239 (5%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTT---ETTEPDRT-LQLSAEQAARIREM 57 + V L + + V R L++ R Sbjct: 31 RLVYRCNPRAEELFGWPAGTLVGQLDAVFLPDDASCDALRGTVRPQLRVGKIVDLETRLA 90 Query: 58 TVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVV 117 S+ + L D + +G R+ + L + Sbjct: 91 RRDGSTFVAHLIARAIDPAAPRLGTVWIVRDVTQEV--LTRDTSARLLREQQL-----IF 143 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 A + IVIL IQR NR + G +++GQS + S + R Sbjct: 144 ENAETGIVIL-RERIIQRCNRRFAELLGYAADELVGQSTRLYYPSEEAWLETGRRAYAAI 202 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 Y + G+ + + D++E+R + + L Sbjct: 203 AETGIYHGDTIFRRRNGESFCCHITGS-MMNRANPDEGYVWLYEDVSEKRASAAAMDAL 260 >UniRef50_C5UZT1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZT1_9PROT Length = 1301 Score = 876 bits (2266), Expect = 0.0, Method: Composition-based stats. Identities = 194/562 (34%), Positives = 301/562 (53%), Gaps = 5/562 (0%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 L+ Q V ++ ++IVI D NI+ N TG +V+G++ L Sbjct: 739 ERAQTGAWLNKLSQAVEQSPNSIVITDLNANIEYANDAFVKTTGYTLPEVMGKNPRIL-H 797 Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 S + + SG + EL G + + Sbjct: 798 SGKTTVETYAAMWTQLNSGQMWRGELINRRKDGTEYVELARISPLRHTDGRVTNYLSIKE 857 Query: 222 DITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKK 279 DITE+++ + R+R LA+ D +TGLPN+ ++D A+ A + + V++LD+D+FK Sbjct: 858 DITEQKQVEARIRQLAHFDLLTGLPNQTLLKDRAGFAMQMAQRSAHHLAVLFLDIDHFKN 917 Query: 280 VNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILT 339 +ND GH GD+LL ++ + L + L+R GGDEF+++ +T +A +IL Sbjct: 918 INDTLGHRIGDELLVHLAKRMKLLLRDEDTLSRFGGDEFILVLPDTDADGAAHVAEKILE 977 Query: 340 RLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEM 399 + I E+ + S+GIA+ P G D + + AD AMY AK+ GR F FT EM Sbjct: 978 TVAKTCYIEQHELVVTPSIGIAMYPSDGMDFDKLYQSADVAMYRAKQDGRNNFRFFTSEM 1037 Query: 400 NQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDF 458 R L L+ LR+AL +Q +HYQP+I+ G++ EAL+RW PE G I P +F Sbjct: 1038 QARSARRLLLENALRQALSRNQFELHYQPQISMQDGKIVGAEALLRWYHPELGSISPAEF 1097 Query: 459 ISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVL 517 I AEESGLI+ +G WV+ V+QV +W+D G + VA+N+SA Q + + Q+L Sbjct: 1098 IPVAEESGLILSIGEWVLRTAVQQVKRWQDAGHPPVTVAINLSAVQFRQARLSELVMQIL 1157 Query: 518 QELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPI 577 E N I++ELTES ++N +A+ V+ G ++ +DDFGTGYSSLS L +F + Sbjct: 1158 HEANLAPHWIELELTESVAMDNPLVAIGVMNDLHGCGIRMSIDDFGTGYSSLSYLRKFKV 1217 Query: 578 DAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQ 637 + +K+DQ FVRD+ S+++V AI+ +A ++ Q IAEGVE+A + AFL G NE Q Sbjct: 1218 NKLKIDQSFVRDLADDIESRAIVTAIITLASSMGFQTIAEGVETAGQLAFLRLQGCNEVQ 1277 Query: 638 GFLFAKPMPAVAFERWYKRYLK 659 G+ F++P+ FE + + + Sbjct: 1278 GYYFSRPLTVALFEAFVLGHAE 1299 Score = 92.6 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 62/196 (31%), Gaps = 14/196 (7%) Query: 73 SDLSVHLVGRKINKREWAGNASAWHDTPAVARDL-----SHGLSFAEQVVSEAHSAIVIL 127 D + L ++K A+ ++ ++ H S +V I + Sbjct: 234 DDAGLVLGMVTLHKLMARIAATVMNEETLRRQESLEHSMHHAESQLRLIVKTIPDLIWLK 293 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 D G N + E + G E D++G++ + + + + E Sbjct: 294 DVEGVYLSCNPMFERFFGAIEADIVGKTDYDFVSREQADFFRAHDRAAMLADKPSINEEW 353 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPN 247 G R L K + I ++ DITE A +++ +T L N Sbjct: 354 VTFADDGHRACLETTKSPMFNAVGQLIGVLGIAHDITERLAAAKKIER------LTQLYN 407 Query: 248 RNAMQDLIDHAINHAD 263 + AI H+ Sbjct: 408 ---ALSQCNQAIVHSS 420 >UniRef50_C6P5X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5X9_9PROT Length = 927 Score = 876 bits (2265), Expect = 0.0, Method: Composition-based stats. Identities = 200/656 (30%), Positives = 306/656 (46%), Gaps = 19/656 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 E Y L ++ + S L + S ARI E+ L Sbjct: 282 EVNDAYARLSGYSREELIGMSIPELDA-----------IDNSELVRARIEEIIRNGGYLE 330 Query: 66 MSLTVDESDLSVHLVGRKINKREWAG-NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 D S+ V +G + + L A V + AI Sbjct: 331 FDTMHKRKDGSLWPVHISTTYSSVSGGRCFVFSTDLTEQKRAEESLRLAAMVYENSSEAI 390 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 ++ D+ I N E TG +V+G++ R + A + + + + Sbjct: 391 LVTDADNLIIAVNPAFEQMTGYAAAEVLGKNPRIFKSGRHD-RAFYHSMWLALDTEGYWH 449 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ V + TDITE ++ +E + AN DS+T Sbjct: 450 GEVWDKRKNGEEYIKLLTINVIRDDDGAIYRHVALFTDITERKKVEELIWRQANYDSLTK 509 Query: 245 LPNRNAMQDLIDHAINHADNNKV--GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR D ++ A + ++ +DLD FK+VND GH GD LL + + I + Sbjct: 510 LPNRQMFHDRLEQEAKKAHRAGLSMALLLIDLDRFKEVNDTLGHDKGDILLIEAARRISA 569 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 C+ +AR GGDEF+V+ S A ++ +A IL L PF++ Y S S+GI+ Sbjct: 570 CVRESDTVARLGGDEFIVILSELEDMASIDRVAQDILGSLAEPFKLDAEPAYISASIGIS 629 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 L P ++ + +HAD AMY AK GR +F FT +M + + L +LR A+ Q Sbjct: 630 LYPNDATELDVLFKHADQAMYVAKYAGRNRFNYFTKDMQEAAQARMHLANDLRIAVAAGQ 689 Query: 422 LVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 ++YQP + G++ EAL+RWQ P RG++ P +FI AEE+GLIVP+G WV V Sbjct: 690 FRVYYQPIVEMSSGQIYKAEALIRWQHPVRGMVSPAEFIPLAEETGLIVPIGEWVFRQAV 749 Query: 481 RQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 +QV +WR K +++VN S Q + + L++ + I VE+TE L++ Sbjct: 750 QQVVQWRRKFHRSFQISVNKSPVQFRHAESL-SWPEYLEQQHVSGDSIIVEITEGLLLDA 808 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 + + +F G QV +DDFGTGYSSLS L F ID +K+DQ FVR++ +L Sbjct: 809 EVEVNKKLLRFRDAGIQVAIDDFGTGYSSLSYLKEFDIDYLKIDQSFVRNLGPGTSDLAL 868 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 AI+ +A L +VIAEGVE++ + L G + QG+L+++P+P FER Sbjct: 869 CEAIIVMAHKLGFKVIAEGVETSTQHELLAAAGCDYGQGYLYSRPLPPEEFERQLA 924 Score = 128 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 80/239 (33%), Gaps = 15/239 (6%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 T++ + + L + P + + ++ +++ +A++ R E + S Sbjct: 152 TIQYTNRQFETLFGYAPGELIGKHISIINAP------GNKSQMETAQEINRQLEKEGVWS 205 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLS----HGLSFAEQVVS 118 + + D + ++ L E + + S + Sbjct: 206 GEVFNRRKDGTTINTFLNASSFQHPELGDLWIGYQRDITKRKLTEAVMLEKESQYRAAID 265 Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 A ++D +G + N +G ++IG S+ +L + R R Sbjct: 266 TAADGFWLVDMQGRLLEVNDAYARLSGYSREELIGMSIPELDA-IDNSELVRARIEEIIR 324 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 +G E + G + + S SG TD+TE++RA+E L LA Sbjct: 325 NGGYLEFDTMHKRKDGSLWPVHISTTYSSVSGGRCFVF---STDLTEQKRAEESL-RLA 379 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 62/215 (28%), Gaps = 10/215 (4%) Query: 20 YWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHL 79 + L + F + +R + E A +++ L + + + Sbjct: 44 FDVLGGTDGSQFFPPE---QIERFREKDREVIAGGKQIEYEAPFWNAKLKENR--IGFFI 98 Query: 80 VGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV-ILDSRGNIQRFNR 138 + + + L Q+V A IV I S IQ NR Sbjct: 99 KNPTFDAEGKLLFLVCITFDVTEDKKAAAALRLQSQIVENAVEGIVLIKASDSTIQYTNR 158 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAA-ASRRNNRVFFRSGNAYEVELWIPTCKGQRL 197 E G ++IG+ + + ++ + + + E++ G + Sbjct: 159 QFETLFGYAPGELIGKHISIINAPGNKSQMETAQEINRQLEKEGVWSGEVFNRRKDGTTI 218 Query: 198 FLFRNKFVHSGSG-KNEIFLICSGTDITEERRAQE 231 F N + I DIT+ + + Sbjct: 219 NTFLNASSFQHPELGDL--WIGYQRDITKRKLTEA 251 Score = 64.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 4/129 (3%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 + +V +A I D+ G I N CE+ G+ V+G + F + R Sbjct: 7 KQVQDIVDSIPAATFIKDAGGRIVYMNHACEEQWGITFD-VLGGTDGSQFFPPEQIERFR 65 Query: 171 RNNRVFFRSGNAYEVE--LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 +R G E E W + F K + +FL+C D+TE+++ Sbjct: 66 EKDREVIAGGKQIEYEAPFWN-AKLKENRIGFFIKNPTFDAEGKLLFLVCITFDVTEDKK 124 Query: 229 AQERLRILA 237 A LR+ + Sbjct: 125 AAAALRLQS 133 >UniRef50_C7RMB6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMB6_9PROT Length = 922 Score = 875 bits (2262), Expect = 0.0, Method: Composition-based stats. Identities = 194/619 (31%), Positives = 311/619 (50%), Gaps = 24/619 (3%) Query: 55 REMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAE 114 R + + M + L ++ R + A L A Sbjct: 300 RGVMDRGLAEEMRIRELNEQLEQRVLER---TARLESANQELNREIAERSRAEAELRIAA 356 Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 + +++ D+ G I R NR + TG DV+G+ + S RE AA Sbjct: 357 IAFD-SQEGMMVTDAHGVILRVNRAFVEETGYSAEDVVGRK-RTMLTSGREDAALDDAMW 414 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + A++ E+W G+ ++ G G + + DIT+ + +++L Sbjct: 415 ETVQRCGAWQGEVWDRRKNGEVYPVWLTISAVKGQGGLVTHYVATHIDITQRKAVEDQLH 474 Query: 235 ILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQL 292 LA D +T LPNR + D + H + N+ ++++DLDNFK +ND GH GD+L Sbjct: 475 KLAFYDPLTQLPNRRLLLDRLGHVLAGSTRSRNQGAIMFIDLDNFKALNDTQGHDVGDRL 534 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-----ALEAMASRILTRLRLPFRI 347 L +V+ + S + +AR GGDEF+V+ + + +EA+A +IL L P+R+ Sbjct: 535 LAEVAQRLKSSVRQCDTVARLGGDEFVVMVQDLAADSMVVAQVEAVAGKILAALDCPYRL 594 Query: 348 ---------GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPE 398 + + + S+GI L H ++ +++ AD AMY AK+ GR F PE Sbjct: 595 VFDAELGRRNALNYHCTASIGITLFGAHSTNVDELLKQADLAMYQAKDSGRNAIRFFDPE 654 Query: 399 MNQRVFEYLWLDTNLRKALENDQLVIHYQPKI-TWRGEVRSLEALVRWQSPERGLIPPLD 457 M + + L+ +LR+A+E Q ++YQP++ + EAL+RW RG++PP + Sbjct: 655 MQAAITSRVALEADLREAVEAGQFQLYYQPQVVGESHRLTGAEALLRWHHSRRGMVPPSE 714 Query: 458 FISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQ 515 FI AEE+GLI+PLG+WV+ Q+A W + + L VAVN+SA Q+ + Sbjct: 715 FIPLAEETGLILPLGQWVLETACAQLATWASQPEMAQLTVAVNVSAHQIRQTDFVDQVLA 774 Query: 516 VLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARF 575 VL + + +ELTES L+ N E ++ + G LDDFGTGYSSLS L R Sbjct: 775 VLADAGANPQRLKLELTESLLVSNVEDIIAKMTLLKSRGVGFSLDDFGTGYSSLSYLKRL 834 Query: 576 PIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINE 635 P+D +K+DQ FV ++ ++ + IVA+A++L L VIAEGVE+ ++ FL ++G + Sbjct: 835 PLDQLKIDQSFVNEVLTDANDAAIAKMIVALAESLGLAVIAEGVETEEQRNFLAESGCHA 894 Query: 636 RQGFLFAKPMPAVAFERWY 654 QG+LF+KP+P FE+W Sbjct: 895 YQGYLFSKPLPLAGFEQWI 913 >UniRef50_C5V5K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K2_9PROT Length = 925 Score = 875 bits (2262), Expect = 0.0, Method: Composition-based stats. Identities = 202/656 (30%), Positives = 319/656 (48%), Gaps = 15/656 (2%) Query: 12 NFLGSHNPYWRLTESSDVLRFS--TTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLT 69 +G H +T S T R + A + + V+ L Sbjct: 262 QHIGGHTQGQFMTADGLWTFASIYPASITPSKRVAYSADFNATQNLDWKVVRHIPRAQLL 321 Query: 70 VDESDLSVHLVGRKINKREWAGNASAWHDTPAVARD-LSHGLSFAEQVVSEAHSAIVILD 128 L L+ +S H V L A + +++I D Sbjct: 322 SRTKVLGERLIPVSTLLLGLIFFSSLKHARTHVRAQLAETDLRIAATAFE-SEESMIITD 380 Query: 129 SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW 188 SRG I + N++ TG + +G++ L + R +A + ++ E+W Sbjct: 381 SRGIILKVNQVFTATTGYTSEEAVGKTPS-LLKTDRHSAEFYHEMWRQIKQTGKWQGEIW 439 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 G+ N + + S TD+TE + A+E++ LA D++TGLPNR Sbjct: 440 DKRKNGEIYPKLLNIYAVKSKNGVVTHYVGSYTDLTERKMAEEKIISLAFYDTLTGLPNR 499 Query: 249 NAMQDLIDHAINH--ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 + D +++A+ ++++DLD FK +ND GH GD LL+ V+ + +C+ Sbjct: 500 RLLLDRLNYALASGLRTGKNGALLFIDLDKFKTLNDTLGHDIGDLLLKQVAHRLKACVRE 559 Query: 307 DQVLARPGGDEFLVLASNTSQSALEAMAS------RILTRLRLPFRIGLIEVYTSCSVGI 360 +AR GGDEF+V+ + + ++EA A +IL LR+P+++ E ++S S+GI Sbjct: 560 IDTVARIGGDEFVVMLEDLNIESVEAAAQTEVIGEKILAALRMPYQLLTNEFHSSVSIGI 619 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 +L +G ++ AD AMY AK+ GR + F M + L+ LRKAL N+ Sbjct: 620 SLFSNNGQSQDEPLKQADIAMYQAKKSGRNKLRFFDQRMQDTISSRANLEAELRKALANE 679 Query: 421 QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 QL +HYQ ++ + E L+RW P G+I P F+ AEE+GLI+P+G WV+ Sbjct: 680 QLQLHYQIQVDSAHQTIGAEVLLRWIHPVNGIISPAQFVPVAEETGLILPIGLWVLETAC 739 Query: 481 RQVAKWRD--KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 Q+ KW+D L +A+N+SARQ T ++ V++ + + +ELTE L+ Sbjct: 740 AQLKKWQDNPATAQLILAINVSARQFHQNGFATEVRSVIERHDINPALLKLELTEGMLLN 799 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 N + ++ ++ + G Q LDDFGTGYSSL L R P+ +K+DQ FVRD+ Q+ Sbjct: 800 NLDDTIATMRSLQEFGVQFSLDDFGTGYSSLQYLKRLPLAQLKIDQSFVRDLATGYNDQA 859 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 +VR I+A+A +LNL VIAEGVE+ + L KN + QG+LF KPMP FE Sbjct: 860 IVRTIIAMAHSLNLNVIAEGVETEIQRQILLKNQCSHFQGYLFGKPMPIEQFESLL 915 >UniRef50_Q2W1Z2 Hypothetical 1041 kDa protein in hypE 3'region n=2 Tax=Proteobacteria RepID=Q2W1Z2_MAGSA Length = 1510 Score = 873 bits (2258), Expect = 0.0, Method: Composition-based stats. Identities = 203/660 (30%), Positives = 324/660 (49%), Gaps = 15/660 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + L + + ++ L R L++ + +A + Sbjct: 855 INMRFEELFGLSAEEVIGKTDQQLFSRDIAQLLRSRDLEVMGQLSA---------IQHLE 905 Query: 67 SLTVDESDLSVHLVGRKINKRE-WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + S + + V I + + L A +V A AI Sbjct: 906 EMVFPTSKVWLDSVRFPIFDSNGVVRAVCSQSTDVTMKHHAEEQLRLAAKVFDRAGEAIT 965 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I DS GNI N TG +VIG++ L + R G ++ Sbjct: 966 ITDSSGNIITVNDSFCRITGYSHQEVIGKNPRFLQSGKHGKDFYDAMWRSLIEQG-CWQG 1024 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E++ G+ + + + + +DI+ + +Q R+ LA D +TG+ Sbjct: 1025 EIFNRRKNGEIYPEWLTVNSVRDENGSVVNYVAIFSDISAIKSSQRRIEFLATHDELTGI 1084 Query: 246 PNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR+ + D + HA+ A K + V+++DLDNFK +ND+ GH GDQLL+ + + C Sbjct: 1085 PNRSLLMDRLKHAVAQAKRQKTKLAVLFIDLDNFKVINDSLGHDVGDQLLKQATERLKHC 1144 Query: 304 LEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 + LAR GGDEF+ + ++ S + ++A+RI+ L F I ++ S S+GI++ Sbjct: 1145 VRDSDTLARLGGDEFVAVLTDVSLEKVNSVAARIVDFLGASFSINDKSLFVSASIGISVF 1204 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P+ G DS +++HADTAMY AKE GR Q+ F EM + L L+T LR ALE Sbjct: 1205 PDDGQDSLTLLKHADTAMYRAKERGRNQYQFFADEMKVIALQRLTLETGLRLALETKSFR 1264 Query: 424 IHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 + YQP++ GEV EAL+RW+ P G + P FI AE GLI +G V V+ Q Sbjct: 1265 MCYQPQVDIHTGEVVGAEALLRWRDPTLGEVSPAHFIPIAESCGLIGAIGETVFTMVLEQ 1324 Query: 483 VAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 +A WR+KG+ + R+A+N+SA QL D + L I +ELTES L+E + Sbjct: 1325 IAYWREKGLTVPRIAINVSAHQLRDAGFAAKVGSWLDSSGISSELIGIELTESALMERID 1384 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 + ++ F +G +V +DDFGTGYSSLS L + PI +K+D+ FV I + +S+ + Sbjct: 1385 MVKEMLTSFDGMGMKVSIDDFGTGYSSLSYLKKLPIHELKIDRSFVDGIALERDDRSIAK 1444 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 AI+ +++AL ++V+AEGVES ++ L + G + QG+LF +P+ AF + + K + Sbjct: 1445 AIIDMSRALGMRVVAEGVESEEQLGVLKEEGCDMVQGYLFHRPLSPEAFAKVIETGGKSS 1504 Score = 76.1 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 56/155 (36%), Gaps = 7/155 (4%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + D + +++ + SA+ + D+ G + N E+ Sbjct: 804 TPQSVVLVVVDHTDLVEAQEQIRESQERLLSIMNHSTSAVSLKDAAGRYEFINMRFEELF 863 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVF--FRSGNAYEVELWIPTCKGQRLFLFRN 202 GL +VIG++ +LF R+ V + E ++ + ++L Sbjct: 864 GLSAEEVIGKTDQQLFSRDIAQLLRSRDLEVMGQLSAIQHLEEMVFPTSK----VWLDSV 919 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 +F S + TD+T + A+E+L LA Sbjct: 920 RFPIFDSNGVVRAVCSQSTDVTMKHHAEEQL-RLA 953 >UniRef50_B4B341 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B341_9CHRO Length = 1342 Score = 873 bits (2258), Expect = 0.0, Method: Composition-based stats. Identities = 199/649 (30%), Positives = 323/649 (49%), Gaps = 18/649 (2%) Query: 24 TESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDE-SDLSVHLVGR 82 T + +L + +AE ++ ++ L + + V+ S++ + Sbjct: 686 TNPNGLLILDLQGKV---LFVNPAAEILFGRKQEDLMGQILGIPIIVNNYSEIEILQPSG 742 Query: 83 KINKREWAGNASAWHD---------TPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 K+ W + + L Q ++ ++VI D+ G I Sbjct: 743 KLIIVRMRLVKIIWQEKNAFLASLVDVTDIQQAQEQLKILYQATEQSPVSVVITDAEGTI 802 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 + N E TG + +VIGQ+ L ++ SG + E Sbjct: 803 EYVNPKFEKITGYQRAEVIGQNPRILKSGETTTEEYKQ-IWKTITSGQEWHGEFHNKKKN 861 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G+ + + + + DITE + Q L AN D++TGLPNR D Sbjct: 862 GELFWEAASISPIKNAEGIITHFVAVKEDITERKAQQTTLTYQANYDALTGLPNRFLAID 921 Query: 254 LIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 + AI AD +V V+++DLD+FK VND GH +GD LL+ VS + CL +A Sbjct: 922 RLKQAILQADRQKKRVAVMFIDLDHFKDVNDTLGHEYGDLLLQKVSQRLKQCLRKSDTVA 981 Query: 312 RPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDS 370 R GGDEFL++ N ++ + +AS+IL+ L PF + E + S S+GI L P+ G+D Sbjct: 982 RLGGDEFLIILPNLRETHHCKLIASKILSSLEKPFNLLTEEAFISASIGITLYPDDGNDV 1041 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 + ++R+AD AMY K GGR F +T MN+ L ++ LR AL+ ++ + YQP I Sbjct: 1042 SVLMRNADAAMYLGKRGGRNDFKFYTMGMNEEAQSRLRIEKLLRYALKKNEFYLVYQPII 1101 Query: 431 TWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 R + V EAL+RW +PE G + P FIS AEE+GLI LG WVI ++V W+ + Sbjct: 1102 DLRFQTVIGAEALLRWNNPELGRVSPDQFISIAEETGLISELGAWVISQACQEVVNWQTQ 1161 Query: 490 GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 G + VAVN+S RQ + + + + +++E+TE L+E+ + +I+Q Sbjct: 1162 GSPIWVAVNLSPRQFRESKLLEIISNAITLNGITNHYLELEITEKLLLEDFPGSKGIIEQ 1221 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 ++ ++ +DDFGTGYS+LS L +FP + +K+D+ F+ DI +LV+ I+A+ Sbjct: 1222 LHEMDFRLSIDDFGTGYSALSYLIKFPFNRLKIDRSFIADIPHNQEVLALVKTIIAMGHG 1281 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 L LQVIAEGVE+ ++ L G + QG+ F++P+ + F R+ + + Sbjct: 1282 LKLQVIAEGVETTEQANILEAEGCDYAQGYFFSRPLLSEEFRRYLQSHQ 1330 Score = 97.6 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 27/202 (13%), Positives = 64/202 (31%), Gaps = 16/202 (7%) Query: 45 QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVAR 104 Q E A+ ++ ++ + + +L +E++++++++ Sbjct: 376 QWIGELIAKKKDKSLFKAQVSANLVKNEANIAIYIMIS----------VMDVSQQQGTEE 425 Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 L L + A I D G N +G+ IG + Sbjct: 426 SLQKLLRLYTNLTQAAPVGIFRADESGKWLYANEKALLISGISLDKAIGMGWANYVHNDD 485 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 A ++ ++ E G ++ + + + TDIT Sbjct: 486 RARVFNE-WIKSIQTQTSWRTEYRYRHSDGNNTWVLVQAIPEMDEQGKIVGYLGTLTDIT 544 Query: 225 EERRAQE---RL--RILANTDS 241 E + A+E ++ ++ A D+ Sbjct: 545 ERKNAEEATNKINAQMQAIFDA 566 Score = 81.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 72/232 (31%), Gaps = 25/232 (10%) Query: 25 ESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKI 84 ++ L F E L+ EQ +R + + + +++ R Sbjct: 204 NQAEALIFLQKEMKRKLLWLKTQIEQFSRSNQEENKCKIFIKT-QLEQQRFEAKFTRRAE 262 Query: 85 NKREWAGNASAWHDTPAVARDLSHGLS-------------------FAEQVVSEAHSAIV 125 D+ + L L E ++ + SAI Sbjct: 263 GTAVTLTRLFDLPDSQTNVQQLEKRLKPEVTPKDNPHNPPSENRISIKEFAITSSISAIA 322 Query: 126 ILDSRGNIQRFNRLCEDYTGLK-EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 I D +GN+ N+ + + +V+G+ + ++ + R+ + Sbjct: 323 IGDLQGNLTYVNQAFLEMWRYDNDDEVLGKPFLNFWQIDQQGETLIQ----TIRTRGQWI 378 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 EL + + I+++ S D+++++ +E L+ L Sbjct: 379 GELIAKKKDKSLFKAQVSANLVKNEANIAIYIMISVMDVSQQQGTEESLQKL 430 Score = 70.3 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 74/223 (33%), Gaps = 32/223 (14%) Query: 18 NPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSV 77 +P + + + + + + + +++ + + + + Sbjct: 594 SPQEFIGRTVQEVLPESVGNLLYEGVQK-------ALVSGEIVSIEYFLIIALQKRFFDA 646 Query: 78 HLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFN 137 +V +++ E D L + ++S + ++ILD +G + N Sbjct: 647 RIV--RLSPVETIAVVRDISDRKQTELALRESEERLKTIISTNPNGLLILDLQGKVLFVN 704 Query: 138 RLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRL 197 E G K+ D++GQ + + + E+ I G+ + Sbjct: 705 PAAEILFGRKQEDLMGQILGIPIIVNNYS-------------------EIEILQPSGKLI 745 Query: 198 FLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR--ILAN 238 + KN + S D+T+ ++AQE+L+ A Sbjct: 746 IVRMRLVKIIWQEKNA--FLASLVDVTDIQQAQEQLKILYQAT 786 Score = 46.0 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 19/168 (11%), Positives = 52/168 (30%), Gaps = 12/168 (7%) Query: 71 DESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLS----FAEQVVSEAHSAIVI 126 + + + V + + + G D ++ + + + + Sbjct: 515 NNTWVLVQAIPEMDEQGKIVGYLGTLTD-ITERKNAEEATNKINAQMQAIFDAFPDILFR 573 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 +D +G I + + IG++V ++ + SG +E Sbjct: 574 IDQQGTILDYKTQDHHSLYCSPQEFIGRTVQEVLP-ESVGNLLYEGVQKALVSGEIVSIE 632 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 ++ + L + F + + I DI++ ++ + LR Sbjct: 633 YFL------IIALQKRFFDARIVRLSPVETIAVVRDISDRKQTELALR 674 >UniRef50_A0L8C6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Bacteria RepID=A0L8C6_MAGSM Length = 720 Score = 871 bits (2253), Expect = 0.0, Method: Composition-based stats. Identities = 191/672 (28%), Positives = 324/672 (48%), Gaps = 19/672 (2%) Query: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI 60 MK + S + + + + + D E RI+E V Sbjct: 51 MKKIGWS--YVTAMHGQEAIDLIPKCQPDVILMDAKMPVLDGF-----EACKRIKENPVT 103 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVA-----RDLSHGLSFAEQ 115 ++ +T E D S++ V L + Sbjct: 104 AHIQVLIITSLEDDESINHAYEVGASDYVPKPIHWVSLQNRVQFLYKMMVAERQLMLTAK 163 Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 V IV+ DS I N E TG V+GQ++ L R + + + Sbjct: 164 VFENTTEGIVVTDSTACITNVNPSFEAITGYDRGSVLGQNISILQSGRHDRRFYGKMWQT 223 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 +G ++ E+W G+ + N + TD+T + ++E L Sbjct: 224 LLTAGK-WQGEVWNRRKNGEIYPQWVNISAIRTGDGQTESYVGVFTDLTRIKESEENLLY 282 Query: 236 LANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLL 293 L+ D++T LPNR D ++ + + + V V+ +DLD FK +ND+ GH GD LL Sbjct: 283 LSGHDALTELPNRLLFHDRLNQTLVESADSGSIVAVLIVDLDRFKVINDSMGHEVGDSLL 342 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEV 352 +V+ + + LAR GGDEF ++ N +Q+ +A +LTR+ P I +E Sbjct: 343 CEVATRLRAICPAKATLARLGGDEFGIVLPNMTQNRDAALLAQEVLTRVAQPITISEVEF 402 Query: 353 YTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTN 412 S+G+ + P G + ++R+A++AMY AK+ GR F + E+N + L++ Sbjct: 403 AVGASIGMTVYPLDGEKPSVLMRNAESAMYHAKQSGRNNFQFYRSELNTASLARILLESG 462 Query: 413 LRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPL 471 LR A++ + ++ YQP++ G++ +EAL+RWQ PE+G++ P +FI AEE+GL++P+ Sbjct: 463 LRNAVDRQEFLLFYQPQMELATGKLIGMEALIRWQHPEQGMVSPGEFIPLAEETGLVIPM 522 Query: 472 GRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVE 530 G+W + + RQ W D+ G+ LR++VN+S Q + + + E +++E Sbjct: 523 GQWALKEACRQSKVWMDQTGVPLRISVNLSGIQFRLPDFTEMVMRTVGESGLPPHCLELE 582 Query: 531 LTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI 590 LTES + + E L + S+ G + +DDFGTG+SSLS L +FPID +K+DQ FVR+ Sbjct: 583 LTESIAMGDVEETLEKLTILSRFGVLLAIDDFGTGFSSLSYLKKFPIDTLKIDQSFVRNC 642 Query: 591 HKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 + P +++RA + +A +LNL+VIAEGVE ++ FL + +E QG+ + +P+ F Sbjct: 643 TRDPEDAAIIRAFINLAHSLNLEVIAEGVEHLEQLEFLAQESCDEIQGYFYGRPLSGDKF 702 Query: 651 ERW-YKRYLKRA 661 E + + K+A Sbjct: 703 EMFMLDAFAKKA 714 >UniRef50_A4G4R7 Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G4R7_HERAR Length = 859 Score = 870 bits (2249), Expect = 0.0, Method: Composition-based stats. Identities = 195/576 (33%), Positives = 314/576 (54%), Gaps = 5/576 (0%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 + + A+ + + + Q V ++ +AI+I D G I+ N Sbjct: 279 SESDLQLLETATHFLAIAIERKQSEVFMRKLSQAVEQSSNAIIITDLNGTIEYANTTFST 338 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 TG HD+IG+ S + + A+ + G +++ E G+ Sbjct: 339 NTGYALHDIIGKKPNM-HKSGKTSRATYADMWAHLGRGESWQGEFINRRHNGEERIDLVR 397 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA 262 + + DIT ++ AQ R+ LA+ D +TGLPNR + + A+ A Sbjct: 398 VSPVREADGRITHYLAIEEDITNQKNAQARIESLAHFDVLTGLPNRALLDERAQRALRLA 457 Query: 263 DNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV 320 + ++ + V++LDLD+FK +ND GH GD LL +++ + + L D L+R GGDEF++ Sbjct: 458 EEDQATLAVMFLDLDHFKNINDTLGHNLGDTLLVELAQRLRAVLRRDDTLSRLGGDEFVL 517 Query: 321 LASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 L ++ + + +A ++ + P+RIG E+ S+GIA+ P G D + ++AD A Sbjct: 518 LLPGANRESAKKIAQELMRAINEPYRIGSHELNVMASIGIAVYPADGMDFETLCKNADVA 577 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSL 439 MY AK+ GR + FT EM YL + LR+A+ +QL +HYQP+I+ G+V Sbjct: 578 MYRAKQEGRNAYRSFTQEMQAYSTRYLQVLNALRQAIAQEQLHVHYQPQISLISGDVIGA 637 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVN 498 EAL+RW PE G I P +FI AEESGLI+ +G WV+ V Q KW G++ L +AVN Sbjct: 638 EALLRWHHPELGNISPAEFIPIAEESGLILQIGEWVLRVAVAQAKKWHQLGLDKLIIAVN 697 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 +SA Q + + Q+L+E +F +++ELTE + + + A++++ + G ++ Sbjct: 698 LSAVQFRHAGLPNLVMQILKEEDFPPQYLELELTEGVAMHDPQGAIAMMNSLHERGVRMS 757 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 +DDFGTGYSSLS L +F +K+DQ FVRDI +++V AI+ +A+ L LQ IAEG Sbjct: 758 IDDFGTGYSSLSYLKQFKAYKLKIDQSFVRDISTDAEDKAIVSAIIGMAKNLGLQTIAEG 817 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 VE+A++ AFL + G +E QG+ ++KP+PA FE + Sbjct: 818 VETAEQQAFLREEGCHEAQGYHYSKPLPAADFETFI 853 >UniRef50_Q608F9 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q608F9_METCA Length = 965 Score = 869 bits (2248), Expect = 0.0, Method: Composition-based stats. Identities = 199/626 (31%), Positives = 319/626 (50%), Gaps = 8/626 (1%) Query: 37 TTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDL--SVHLVGRKINKREWAGNAS 94 P + E R + + +LV K E Sbjct: 334 ELYPSDARFIFEEVVRTRRPFEAVARPFTFPDQPERGVTYWDWNLVPVLDGKGEVEYLLF 393 Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 + D + + L E A++I D+R I R N E TG +V+G+ Sbjct: 394 SLVDV-TDRQKATAQLRLIETAFQHTRDAVLITDARARILRVNPAFETITGYSAGEVVGR 452 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 + L R + A RR R + + E+W G +++ G + Sbjct: 453 TPRMLQSGRHDGAFYRRFWRA-LETEGHWSGEIWNRHRDGHIFPAWQSVSAVKGPDGSTT 511 Query: 215 FLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYL 272 + TDI+E +RA+ ++R L+ D +TGLPNR Q +D I A D ++ +V L Sbjct: 512 HYVSIFTDISEFKRAEAQIRYLSYHDDLTGLPNRAYFQARLDQLIEAAARDRKQIALVVL 571 Query: 273 DLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA 332 DLD FK +ND+ GH GD+LL V+ I C +AR GGDEF+V+ +++ Sbjct: 572 DLDRFKTINDSLGHSVGDELLCQVAERIQDCTGQGDFVARQGGDEFVVILADSDAVRAAR 631 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 +A+ +++ + P G + + S+GI+L P DS ++I+ AD AMY AK GR + Sbjct: 632 VANAMISAIAKPAVAGGRTLIVTPSLGISLYPHDAGDSESLIKSADAAMYHAKSLGRNTY 691 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG 451 F+ EM+ E L L+ L +AL N + ++YQP+I + LEAL+RW+ PE G Sbjct: 692 QFFSAEMSAVATERLALENALHQALSNGEFRLYYQPQIEVCSRRLIGLEALIRWRHPEVG 751 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIF 510 +PPL FI AEE+G+I +GRWV+ + RQ +W+ G+ + VAVN+S QL Sbjct: 752 WVPPLRFIPLAEETGIIHRIGRWVLEEACRQQREWQAAGLCIVPVAVNLSPLQLQKDDFP 811 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 ++ +L +++ELTE+ ++ + ++++ + G + +DDFGTGYSSL Sbjct: 812 EQVEALLSGCRLAPGLLELELTETAVMRDVGRMSDMLRKLKERGTRFSIDDFGTGYSSLG 871 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L RFP+D +K+DQ F+RD+ ++ ++ RAI+A+A+ L+L+V+AEGVE+A++ FL + Sbjct: 872 YLNRFPVDKLKIDQSFIRDVTRREDHAAITRAIIALAKQLHLKVVAEGVETAEQLEFLER 931 Query: 631 NGINERQGFLFAKPMPAVAFERWYKR 656 G + QGF F++P+PA W R Sbjct: 932 AGCDGAQGFYFSRPVPADEIAGWLSR 957 Score = 112 bits (282), Expect = 4e-23, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 61/218 (27%), Gaps = 12/218 (5%) Query: 26 SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRK-- 83 + S AA R + S ++ + H+ R Sbjct: 73 DPERFEASYEAFLALVHPDDRERVDAAYRRSIADRGSYEIVHRLLMPDGRVKHVRERCQT 132 Query: 84 ---INKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLC 140 + R + W + L +V +++ D +G I+ +N+ Sbjct: 133 FYSEDGRPLRSVGTVW--DVTSFHETEEKLHRLAAIVESTGDTVIVSDLQGRIRTWNKGA 190 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 E G ++IGQ V L ++ + R E G+ + Sbjct: 191 ERMWGYAAEEIIGQPVTVLPPLAKQGEP-GQILRRVIDEHEVVRFESRGLHKDGRDFPIS 249 Query: 201 RNKFVHSGSGKNEIFLICSGTDITE---ERRA-QERLR 234 + + DITE + QERL+ Sbjct: 250 LTVSPLFDAENRLTGVSAIIRDITEMERLKATLQERLK 287 Score = 81.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 14/236 (5%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 +R + + + + VL + EP + L+ ++ +R + Sbjct: 183 IRTWNKGAERMWGYAAEEIIGQPVTVL-PPLAKQGEPGQILRRVIDEHEVVRFESRG--- 238 Query: 64 LMMSLTVDESDLSVHLVGRKINKRE-----WAGNASAWHDTPAVARDLSHGLSFAEQVVS 118 L D D + L + E + + + L L E V Sbjct: 239 ----LHKDGRDFPISLTVSPLFDAENRLTGVSAIIRDITEMERLKATLQERLKLVEMVFQ 294 Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 + S +V+LD + N R N + G++ F+L+ S Sbjct: 295 YSVSCLVVLDPQFNFIRVNPAYARACRRDVAEFEGRNHFELYPSDARFIFEEVVRTRRPF 354 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 A +G + + N +L+ S D+T+ ++A +LR Sbjct: 355 EAVARPFTFPDQPERGVTYWDW-NLVPVLDGKGEVEYLLFSLVDVTDRQKATAQLR 409 Score = 42.6 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 8/144 (5%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS-RGNIQRFNRLCEDYTGLKEH--DVIG 153 A R + L A+QV A+ LD +G ++ +++ + + Sbjct: 26 KRAEAALRRSAFHLREAQQV---ANLGSWELDLVQGRLEWSDQVF-RIFEIDPERFEASY 81 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 ++ L + R +YE+ + G+ + Sbjct: 82 EAFLALVHP-DDRERVDAAYRRSIADRGSYEIVHRLLMPDGRVKHVRERCQTFYSEDGRP 140 Query: 214 IFLICSGTDITEERRAQERLRILA 237 + + + D+T +E+L LA Sbjct: 141 LRSVGTVWDVTSFHETEEKLHRLA 164 >UniRef50_Q1NRJ4 PAS:GGDEF:EAL:GAF n=5 Tax=Deltaproteobacteria RepID=Q1NRJ4_9DELT Length = 1052 Score = 869 bits (2247), Expect = 0.0, Method: Composition-based stats. Identities = 188/654 (28%), Positives = 309/654 (47%), Gaps = 16/654 (2%) Query: 12 NFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVD 71 L + L P + ++RE + + Sbjct: 405 QRLFGYTAQEASHRPLSFL-------LAPHELDFYQGQVLPQLRERLSYQIEIEVQTKHG 457 Query: 72 ESDLSVHLVGR--KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS 129 + + + + G + + + + + + + + A+VI D+ Sbjct: 458 DRRFADFSLTQFSPEGGGSTRGGIICYARDITERQKREERMRLSSRFLEDTNEAVVITDA 517 Query: 130 RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWI 189 I NR E TG + IGQ+ L S A R + +E ELW Sbjct: 518 DARIIEVNRAFEKLTGYSRQEAIGQNPRIL-QSGHYDADFYREMWDTLLTTGHWEGELWS 576 Query: 190 PTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRN 249 + + + + D+T ++ QE+L L + D +T LPN Sbjct: 577 RRKNNELHPKWLSISAVYDQRGRITHYVGISNDLTATKQTQEKLEELTHYDQLTSLPNIL 636 Query: 250 AMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHD 307 +D + A+ A +KV ++ DLD FK+VND+ GH GD +L +V+ + L Sbjct: 637 LFRDRLQQAMARARREEHKVALLIFDLDRFKEVNDSLGHSVGDLVLTEVAQRLRQQLSLA 696 Query: 308 QVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEH 366 + RPGGDEF +L + A +L PF+ ++Y + S+GI L P+ Sbjct: 697 DTICRPGGDEFYLLLGRLTDIDTAVQAAQNVLELFSKPFQAADHQLYLTPSIGITLFPDD 756 Query: 367 GSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHY 426 G + ++I+ +TAMY AK+ G F F M + + LR+A+E ++ ++Y Sbjct: 757 GEEVESLIQSVETAMYHAKKDGGNSFQFFQETMFTAALGRMTMKNRLRRAVELEEFELYY 816 Query: 427 QPKITWRGE-VRSLEALVRWQSPERG-LIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 QPKI G V EAL+RW PERG + P +FI AEE+GLI+P+G WV+ RQ Sbjct: 817 QPKIAADGRTVVGAEALIRWVQPERGGPVSPAEFIPLAEETGLIIPIGEWVLRQACRQSL 876 Query: 485 KWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 W+ G+ LR+AVN+SA Q + + +LQE+ +++E+TES L+E+ A Sbjct: 877 LWQQAGLPPLRIAVNLSAVQFKQPGLDDEINWILQEIGLPAELLELEITESLLMEDVTTA 936 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 + + + +G + LDDFGTGYSSLS L FP+D +K+D+ FVRD+ ++++ I Sbjct: 937 NATLWKLKDMGIHLALDDFGTGYSSLSYLKNFPLDTLKIDREFVRDLSTDDEDRAVIITI 996 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 + +A +L ++V+AEGVE A + AFL + G + QG+ F++P+PA FE++ + Sbjct: 997 ITLAHSLKMEVVAEGVEDADQVAFLRQRGCDVFQGYHFSRPLPAKEFEQFLRSQ 1050 Score = 95.0 bits (236), Expect = 8e-18, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 7/185 (3%) Query: 56 EMTVITSSLMMSLTVDESDLSVHLVGRKIN-KREWAGNASAWHDTPA---VARDLSHGLS 111 + + L V + V + + + + ++ D A + + L Sbjct: 316 KANGLQGMAGQPLEVAGKVVGVLALFTRYRLPASISDSLASLADLIALGLERKQNENRLL 375 Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 ++V + AI+ D G I +N+ + G + + + L E + Sbjct: 376 TQARIVDQIRDAIITTDPAGLIMTWNQGAQRLFGYTAQEASHRPLSFLLAP-HELDFYQG 434 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI--FLICSGTDITEERRA 229 R +Y++E+ + T G R F + S G +IC DITE ++ Sbjct: 435 QVLPQLRERLSYQIEIEVQTKHGDRRFADFSLTQFSPEGGGSTRGGIICYARDITERQKR 494 Query: 230 QERLR 234 +ER+R Sbjct: 495 EERMR 499 Score = 47.6 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 27/73 (36%) Query: 162 SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGT 221 + + R G Y++ I G+ + + + ++ + Sbjct: 135 PEDDRRQVQEAVAHTQREGVPYDITHRIRLPNGREKIIHERGELIRDEQGRPVKMMGTAQ 194 Query: 222 DITEERRAQERLR 234 D+T +++A+E L+ Sbjct: 195 DVTAQKQAEEELQ 207 >UniRef50_Q47BF2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BF2_DECAR Length = 1038 Score = 869 bits (2246), Expect = 0.0, Method: Composition-based stats. Identities = 181/657 (27%), Positives = 302/657 (45%), Gaps = 16/657 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + + + Q R + Sbjct: 378 INPKALEMLGWTADEVIGSDQHARFHHHRPDGSIYPSADCPVYQTLRDGQRRQGEEWF-- 435 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 D V I+++E A + AR + A A+++ Sbjct: 436 -FNKDGRGFPVQYSVTPISRQEDKEGAVVTFRDISEARKADELMRIAAIAFE-TQEAMLV 493 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D++ I R NR + TG + IGQ+ L S + ++ + + E Sbjct: 494 TDAKSQILRVNRAFTEVTGYSAAEAIGQTPA-LLKSGYHEDSFYKDLWTSLKENGLWRGE 552 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 +W G+ + G + S DIT+ + A+E+++ LA D +T LP Sbjct: 553 IWNRRKNGEIYPEWLTISAVRGQHGEITHFVSSFLDITKRKEAEEQIQFLALYDPLTHLP 612 Query: 247 NRNAMQDLIDHAINH--ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR + + + A+ ++++DLDNFK +ND+ GH GD LLR V+L + + Sbjct: 613 NRRLLNERLSKALTSSGRQRRHAALLFIDLDNFKMINDSMGHDIGDLLLRQVALRLRESV 672 Query: 305 EHDQVLARPGGDEFLVLASNTSQS------ALEAMASRILTRLRLPFRIGLIEVYTSCSV 358 + ++R GGDEF++L S + +E +A ++L L P++ G + + S+ Sbjct: 673 RSNDTVSRLGGDEFVILLEELSPNIHDATTQIEHIAQKMLDSLVQPYKFGEFSHHCTASI 732 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 G + ++++ AD AMY AK G+ + F P M V L+ +LR+A Sbjct: 733 GAIPFMDATETIESLLKSADMAMYKAKAAGKNRLFFFDPAMQTEVEARAALERDLRQAQR 792 Query: 419 NDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 Q V++ QP++ G V EAL+RWQ P GLI P +F AEE+ LI+P+G+WV+ + Sbjct: 793 EKQFVLYLQPQVDQSGHVSGAEALIRWQHPTHGLILPGEFTHVAEETRLILPIGQWVLEE 852 Query: 479 VVRQVAKWRDKG--INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 +Q+ W+ +L +A+N+SA Q + + + + E + +E+TES L Sbjct: 853 ACKQLVIWQKNPDTAHLTLAINVSALQFRNPDFVDDVARAIHESGALASRLKLEITESLL 912 Query: 537 IENDELALSVIQQFS-QLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPV 595 +E+ + + +Q QLG + LDDFGTGYSSLS L + P+D IK+D+ FV+DIH P Sbjct: 913 LEDIDGTIERMQVLKNQLGVGLSLDDFGTGYSSLSYLKQLPLDQIKIDRSFVKDIHCNPN 972 Query: 596 SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 ++ A++A+ ++ +L VIAEGVE+ ++ L G QG+LF +P P AF Sbjct: 973 DAAIAEAVIALGRSFSLNVIAEGVETIEQRDALIARGCLTFQGYLFGRPGPIDAFPA 1029 Score = 85.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 44/145 (30%), Gaps = 7/145 (4%) Query: 100 PAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 R + L ++ + +D G N + G +VIG Sbjct: 342 IRSKRLVGAALRERASLLDSLGEGVYGIDQNGQCTFINPKALEMLGWTADEVIGSDQHAR 401 Query: 160 FMSRREAAASRRN----NRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 F R + + R G + E W G+ + + S Sbjct: 402 FHHHRPDGSIYPSADCPVYQTLRDGQRRQGEEWFFNKDGRGFPVQYSVTPISRQEDK-EG 460 Query: 216 LICSGTDITEERRAQE--RLRILAN 238 + + DI+E R+A E R+ +A Sbjct: 461 AVVTFRDISEARKADELMRIAAIAF 485 >UniRef50_Q3JAR2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Nitrosococcus oceani RepID=Q3JAR2_NITOC Length = 944 Score = 869 bits (2246), Expect = 0.0, Method: Composition-based stats. Identities = 194/639 (30%), Positives = 327/639 (51%), Gaps = 18/639 (2%) Query: 35 TETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWA---- 90 ++ + A + + I L + S L + + + + + Sbjct: 301 QGKVIIANDIRHDSWAAGMLSHDSQIKRFLALPFYHHNSLLGIIGIANRDKPYDKSLINY 360 Query: 91 --------GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 G+ + ++ L +V ++I D++ + N Sbjct: 361 LNPLLSTCGSILDAYHNDQRRKNAESRLRLTAKVFESTVEGVIITDTKAYVVDVNEAFTH 420 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 TG+ +++G+ + L +++E S + R +S ++ ELW G+ L+ Sbjct: 421 ITGIARSEIMGRHLSTL-QTKQEKPISFQRVRHAIKSTGQWQGELWSQRKNGEIYPLWVT 479 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA 262 S + + +DIT ++ ++RL LA+ D++TGLPNR+ D ++HAI+HA Sbjct: 480 ANAVRNSKEEITHFVAIFSDITLRKQTEQRLYYLAHHDALTGLPNRSLFLDRLEHAIHHA 539 Query: 263 DNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV 320 + + V+++DLD FK +ND GH GD LL+ V+ + + + +AR GGDEF V Sbjct: 540 QRHHHRIAVLFIDLDRFKFINDTLGHPIGDILLKQVAERMRLNIRAEDTIARLGGDEFTV 599 Query: 321 LASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADT 379 + N T SA+ + +I++ PF I E++ S S+G++L PE G +++ +++ AD Sbjct: 600 IIENFTDTSAISLITQKIISACEKPFNIKGNELFVSASIGVSLYPEDGHEASMLLQRADA 659 Query: 380 AMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRS 438 AMY AK+ G+ FT E+N E L L LR+AL + ++YQP I G + S Sbjct: 660 AMYQAKKRGKSCCQFFTTEINTAATEQLALKNLLRRALARKEFQLYYQPIINMESGAIVS 719 Query: 439 LEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW-RDKGINLRVAV 497 +EAL+RW PE GLI P FI AEE+GLI+PLG WV+ Q W + +R+A+ Sbjct: 720 VEALIRWVDPELGLISPNTFIPLAEENGLILPLGEWVLQTACTQAKIWNQSNPYPVRIAI 779 Query: 498 NISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQV 557 N+SARQL + ++L++ F +++ELTES LI E +L + ++G ++ Sbjct: 780 NLSARQLEQTDFSERVSEILKKTPFPTDHLELELTESMLINRMESSLKTLNTLKKMGCRL 839 Query: 558 HLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAE 617 LDDFGTGYS L+ L RFPID +K+D+ FV+ I P ++ A+ +A +L VIA+ Sbjct: 840 SLDDFGTGYSPLAYLKRFPIDTVKIDRSFVQGISIDPDDAAITTAVTTMAHSLKRAVIAK 899 Query: 618 GVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 GVE+ ++ FL + ++E QG+ + P+PA + + Sbjct: 900 GVETREQLNFLNEIKVDEAQGYFISYPVPAEELTQKLRE 938 >UniRef50_B7V0E6 Motility regulator n=25 Tax=Pseudomonas RepID=B7V0E6_PSEA8 Length = 1415 Score = 868 bits (2245), Expect = 0.0, Method: Composition-based stats. Identities = 208/669 (31%), Positives = 338/669 (50%), Gaps = 17/669 (2%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 + + ++P W L + + + L+ +++ + Sbjct: 738 NASYVSPSVQHVFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRE 797 Query: 63 SLMMSL------TVDESDLSVHLVGRKINKREWA-GNASAWHDTPAVARDLSHGLSFAEQ 115 + L D + + L + + R L A Sbjct: 798 NPGQHLFALDCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAAT 857 Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 V + +AI++ D G I + N TG DV+ Q L R+EA + Sbjct: 858 VFEHSTAAIMVTDPAGYIVQVNDSFSRLTGYSPADVLDQQPRLLTADRQEANQLKHVL-A 916 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + ++E E+ G+ + + + +C +DI+E + ++ R+ Sbjct: 917 SLQHSGSWEGEILQKRKTGELYPSWVGITAVRDEEGDLVSFVCFFSDISERKASERRIHR 976 Query: 236 LANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLL 293 LA D++T LPNR QD + A+ A+ N V +++LDLD FK +ND+ GH GD++L Sbjct: 977 LAYYDALTHLPNRTLFQDRLHTALQQAERNGQWVVLMFLDLDRFKPINDSLGHAAGDRML 1036 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE-----AMASRILTRLRLPFRIG 348 ++V+ + +C+ D +AR GGDEF +L + + +A IL RL PF + Sbjct: 1037 QEVATRLSACVSQDDTVARMGGDEFTLLLPSQGDREIALKRAIQVAELILGRLARPFTLE 1096 Query: 349 LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLW 408 E + + S+G+ALSP+ G++ + ++++ADTAMY AKE G+ F + EMN R E L Sbjct: 1097 GREFFVTASIGVALSPQDGAELSLLMKNADTAMYHAKEMGKNNFQFYQAEMNARALERLE 1156 Query: 409 LDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGL 467 L+++LR+ALE + V+HYQP+ T G + EAL+RWQ P RGL+PP +FI EE GL Sbjct: 1157 LESDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGL 1216 Query: 468 IVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCP 526 + +G W++ + +Q+ W + + V+VN+SARQ AD + + +L E Sbjct: 1217 VAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPAC 1276 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 +++ELTES L+ + A+ ++ +LG + +DDFGTGYSSL+ L +FPID +K+D+ F Sbjct: 1277 LELELTESILMSDVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSF 1336 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 V + + RAI+A+A +LNL VIAEGVES + FL ++G +E QG+LF +PMP Sbjct: 1337 VDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMP 1396 Query: 647 AVAFERWYK 655 A F Y Sbjct: 1397 AEQFGMLYA 1405 Score = 78.8 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 28/240 (11%), Positives = 57/240 (23%), Gaps = 16/240 (6%) Query: 15 GSHNPYWR--LTESSDVLRFSTTETTEPDRTLQLSAEQA-ARIREMTVITSSLMMSLTVD 71 +N + E+ + R L + + + Sbjct: 618 LGYNQEELARMGENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWF 677 Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 + R G A T L + I D+ Sbjct: 678 DIREQAFSRDRSGRVARLIGVAKDITFTVEANNALRENGRRYRMLAENISDVIFSTDAEL 737 Query: 132 NIQRFNRLCEDYTGLKEHDVI-------GQSVFK------LFMSRREAAASRRNNRVFFR 178 N + + G + + + L R A R+ Sbjct: 738 NASYVSPSVQHVFGYSPEWALLNGLHQTATNPRQLGRLNGLLRRVRHAIGDRQKLAELRE 797 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 + + L G+++ + + L+ DI+++RRA+ LR+ A Sbjct: 798 NPGQHLFALDCLRADGRKIPIELRIVLMWDEHDRFEGLLGIARDISQQRRAERELRMAAT 857 Score = 62.6 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 53/200 (26%), Gaps = 7/200 (3%) Query: 32 FSTTETTEPDRTLQLSAEQAARIREMTVITSSLM-MSLTVDESDLSVHLVGRKINKREWA 90 +PD E R + + ++L T L + L Sbjct: 504 LLDHGPLQPDSLRLQVIEALIERRPVLELEATLRCGKSTPRHLWLQLRLPENPGEWHAVT 563 Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR-GNIQRFNRLCEDYTGLKEH 149 + S V L F V + I D + N G + Sbjct: 564 LSLSDVTSRKEVELSLIEREKFWSDAVQAVPDTLYIHDLHARRVIFSNHHLGQQLGYNQE 623 Query: 150 DV--IGQSVFKLFMSRREAAASR--RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 ++ +G++ ++ + + RN + G + +L G+ + + Sbjct: 624 ELARMGENFWETLLHPDDQEYYWRIRNLQHVVGDGLLLDSQLRWRHRDGRWHWFDIREQA 683 Query: 206 H-SGSGKNEIFLICSGTDIT 224 LI DIT Sbjct: 684 FSRDRSGRVARLIGVAKDIT 703 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/193 (11%), Positives = 49/193 (25%), Gaps = 26/193 (13%) Query: 53 RIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF 112 ++R + T + L +L++ L+ + A+ L Sbjct: 234 QLRGLYDSTRVRLGLLPGIGGELAIFLLLVGVTVYMLLRLHREQQGLRAMTLASQRSLRQ 293 Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 A ++ +++ + G + N E G+ + L Sbjct: 294 AATALAAIDERVLVTRADGRLSYLNPQAERLFGISSAQARQHHLLGLLPDLEPG------ 347 Query: 173 NRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG----------------SGKNEIFL 216 EL +G+ ++ + G Sbjct: 348 WLTDAGGDGETRSELLPLRVRGEPRTFTLSRHPLASYPALADQAWTLREQILQGGQ---- 403 Query: 217 ICSGTDITEERRA 229 + D+TEE+ A Sbjct: 404 VWVLRDVTEEQHA 416 >UniRef50_C6P1Y8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1Y8_9PROT Length = 812 Score = 868 bits (2244), Expect = 0.0, Method: Composition-based stats. Identities = 187/618 (30%), Positives = 305/618 (49%), Gaps = 12/618 (1%) Query: 55 REMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAE 114 R + + S++ + V + + + E A++ + + A Sbjct: 195 RPIVKLQSTMESMQLSGSMEQFVPVKLEQGEQDEIGKLGLAFNQMSEALSNSERSMKLAA 254 Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 + AI++ D I N TG +V G++ + + + R + Sbjct: 255 SIYQSNADAIMVTDENNLIVDVNPAFTRITGYTLDEVRGKNPRIMQSGKHDNEFYRHMWQ 314 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 G ++ E+W G+ + + S + +DITE+++ E + Sbjct: 315 AILNEG-HWQGEIWDKRKTGEIYAKLAHISILRRSDGGVYRHVAQFSDITEKKQKDELIF 373 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQL 292 AN D++T LPNR + D + HA+ N+ +++LDLD FK +ND GH +GD L Sbjct: 374 WQANYDALTCLPNRRLLNDRLAHALAANKRNEDCGALMFLDLDKFKTLNDTLGHAYGDML 433 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS------ALEAMASRILTRLRLPFR 346 L +V+ I SC+ +AR GGDEF+VL N A +A +I L P++ Sbjct: 434 LVEVARRIKSCVREVDTVARIGGDEFVVLLENLGADIKDATQAAAHIAEKIRASLSTPYQ 493 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 + ++S S+G++L +G + +I+ AD AMY AKE GR F P+M Q V Sbjct: 494 LHDKMHHSSPSIGVSLIHCNGESAEELIKQADMAMYQAKEAGRNAVRFFDPQMQQSVETI 553 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 L+++LR A+ QL + YQ ++ EAL+RW P RG++ P FI +AEES Sbjct: 554 AALESDLRHAVHERQLQLFYQIQLDHTHHPVGAEALLRWIHPVRGMVSPAQFIPFAEESS 613 Query: 467 LIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEY 524 LI+ +G WV+ + RQ+A W +++ +L +AVNISARQ + ++++ + Sbjct: 614 LILDIGHWVLDEACRQIAAWSHQERTRDLVLAVNISARQFKQPDFVEQVGAMIRKHAIQP 673 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQ-LGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 + +ELTES +E ++ ++ + LG + LDDFGTGYSSLS L R P+D IK+D Sbjct: 674 ARLKLELTESIALEELDVIITKMHALRNGLGISLSLDDFGTGYSSLSYLKRLPLDQIKID 733 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 Q FVRD+ +V+ I+ +A ++VIAEGVE+A + L + G QG+LF + Sbjct: 734 QSFVRDMTVDSGDAVMVKTIIDMAHNFGIEVIAEGVETAGQFFLLKQYGCLLFQGYLFGR 793 Query: 644 PMPAVAFERWYKRYLKRA 661 P+P FE ++ A Sbjct: 794 PVPLREFEALLQQTGSSA 811 >UniRef50_A1K5Q6 GGDEF/EAL/PAC/PAS-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K5Q6_AZOSB Length = 828 Score = 868 bits (2243), Expect = 0.0, Method: Composition-based stats. Identities = 202/661 (30%), Positives = 305/661 (46%), Gaps = 16/661 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTE----PDRTLQLSAEQAARIREMTVITS 62 + L + L E R +L +Q + + ++ Sbjct: 155 TNGAAQALFGLAERDWFGRTDLELGSEDPARAEVHAVCARNDELVWQQGGMRQMLEIVED 214 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 L + + + + + R L A V Sbjct: 215 GQGRRLVFEATRIPL------FDSVGQRKGIVVVGRDITERRAAEERLRQAATVFDNTVE 268 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 I I D G IQ N TG E +VIG L R A R Sbjct: 269 GISITDRDGIIQSVNPAFSRITGYAEAEVIGCHTRILQSGRH-GADYYRAMWRTLARTGQ 327 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 ++ E+W G+ + + +DI++ + AQ +L LA+ D + Sbjct: 328 WQGEIWNRRKTGEVYPQWLTIGTVRDDEGEVSNYVAVFSDISQIKDAQSQLERLAHYDPL 387 Query: 243 TGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 TGLPNR + D + HAI+ A V V++LDLD FK VND+ GH GD+LL+ ++ + Sbjct: 388 TGLPNRALLGDRLAHAISRARRAGTSVAVLFLDLDGFKNVNDSLGHPAGDRLLQIIAERL 447 Query: 301 LSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 L + ++R GGDEF V+ + A+ +A ++ + P + + S S+G Sbjct: 448 CGALRSEGSVSRFGGDEFAVVLEDVVRGEAVSEVAEHLIAEIARPLDLDGHGAHVSASIG 507 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 IAL P G D+T +I+ ADTAMY +K GR F +M Q L L+ LR+ALE Sbjct: 508 IALFPRDGDDATTLIKAADTAMYRSKALGRNTFSFHHEDMAQAAHRRLSLEHGLRQALEQ 567 Query: 420 DQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 + + YQP+I G + EAL+RW+ PERGL+ P +F+ AEE+GLI+P+G WV+ + Sbjct: 568 GRFELWYQPQIDLRTGVLAGAEALLRWRDPERGLVSPAEFVPLAEETGLILPIGLWVLEE 627 Query: 479 VVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 R W D G+ R+AVN++A Q+ A+ +VL ++VE+TE L+ Sbjct: 628 ACRAGRAWLDVGLAPGRIAVNVAAPQIERGGFDQAVARVLSASGLPPAALEVEITEGSLL 687 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 + E A + LG V +DDFGTGYSSL+ L + +K+D+ FVRD+ + Sbjct: 688 RSAENARLAVAALRALGVGVAIDDFGTGYSSLAYLKNLAVQTLKIDREFVRDLPHDAGNL 747 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 ++ RAI+A+ ++L V+AEGVE + AFL G QG+LFAKPMP F W + Y Sbjct: 748 AITRAIIAMCRSLGFGVVAEGVEEPAQAAFLVSEGCTLAQGYLFAKPMPGAEFAEWLRTY 807 Query: 658 L 658 Sbjct: 808 R 808 Score = 81.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 75/242 (30%), Gaps = 14/242 (5%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 T + + L +S V S + + + + + Sbjct: 29 CNTAFLDFLGYTADRILGKS--VFELSPPDLAARYHAQDQALFD----NPGEQVYEAQVQ 82 Query: 67 SLTVDESDLSVHLVG---RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 + + ++ + + G D R + ++ A Sbjct: 83 NARGERREVVFYKATFHDTEGKVAGLVGTILDITDRKQAERRVRESEERLGALIQALPDA 142 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR----RNNRVFFRS 179 + + D G N + GL E D G++ +L A RN+ + ++ Sbjct: 143 VFLKDGEGRWLVTNGAAQALFGLAERDWFGRTDLELGSEDPARAEVHAVCARNDELVWQQ 202 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN- 238 G ++ + +G+RL + S ++ G DITE R A+ERLR A Sbjct: 203 GGMRQMLEIVEDGQGRRLVFEATRIPLFDSVGQRKGIVVVGRDITERRAAEERLRQAATV 262 Query: 239 TD 240 D Sbjct: 263 FD 264 Score = 79.2 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 1/118 (0%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 F + V+ + + D+ G N D+ G ++G+SVF+L AA Sbjct: 5 FLQNVLDAIPAPVFFKDAAGRYLGCNTAFLDFLGYTADRILGKSVFEL-SPPDLAARYHA 63 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 ++ F + E + +G+R + K + L+ + DIT+ ++A Sbjct: 64 QDQALFDNPGEQVYEAQVQNARGERREVVFYKATFHDTEGKVAGLVGTILDITDRKQA 121 >UniRef50_Q3A4W5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A4W5_PELCD Length = 1274 Score = 867 bits (2242), Expect = 0.0, Method: Composition-based stats. Identities = 200/655 (30%), Positives = 328/655 (50%), Gaps = 15/655 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + + P + + + + S E+ +++ + + Sbjct: 589 YMAPQVERIFGYKPEDWIDNQFWL------DRVHEADWGKASREELSKLNQQEAHSIEY- 641 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 D S + V + R + E ++ L + + ++ ++V Sbjct: 642 RFYKKDGSIVWVRDIIRIESDAENKLCLHGLLIDITDSKQSESQLKKLSRAIEQSPVSVV 701 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I D G I+ N TG +VI Q+ L S + + SG + Sbjct: 702 ITDPEGRIEYVNPKFTQLTGYTLEEVIAQNPRIL-KSGNLLPSVYDSLWKTITSGKEWYG 760 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 EL G + + I I DIT+ + ++RL +A D +TGL Sbjct: 761 ELENKRKDGSIFWESASISPLFDESGKIINFIGVKEDITQRKLNEKRLEYMATHDGLTGL 820 Query: 246 PNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 NR + D ++ A++ + +K V V+ LDLD FK +ND+ GHL GDQ+L+ V + Sbjct: 821 ANRTLLYDHLEIALHQSQRSKKLVAVILLDLDRFKVINDSLGHLVGDQVLKAVGQRLKQY 880 Query: 304 LEHDQVLARPGGDEFLVLASNTSQSALE-AMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 + +AR GGDEF+VL ++ + +A +L +L PF + E+Y S S GI L Sbjct: 881 VRSTDTVARLGGDEFVVLLTDVRDTTAAGKIAHNLLRKLNEPFFLHGRELYVSASFGICL 940 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 S D T ++R+AD AMY AK G G + ++ EMN+ + + L ++ +LR+ALE ++ Sbjct: 941 SETDNVDGTILLRNADIAMYKAKAEGCGLY-FYSHEMNEHLIKTLEMENSLRQALEKNEF 999 Query: 423 VIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 ++YQPK+ G + EAL+RW+ P+RG+IPP +FI AEE+GLIV +G WV+ + R Sbjct: 1000 QLYYQPKVEHATGRIIGCEALLRWRHPQRGMIPPSEFIPLAEETGLIVQIGHWVLAEACR 1059 Query: 482 QVAKWRDKGIN-LRVAVNISARQLADQ-TIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 Q W +G+ L +AVNISARQ + A+K L+ +++ELTES ++++ Sbjct: 1060 QSKIWETEGLPPLTMAVNISARQFYQGENLIQAVKSTLERSQLVPSQLELELTESMVMKD 1119 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 A +++ QLG + LDDFGTGYSSL+ L FP+D++K+D+ F+ DI S ++ Sbjct: 1120 AVNAERTMRKIKQLGVSLSLDDFGTGYSSLNYLRSFPVDSLKIDRSFILDIASDASSAAI 1179 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 + +I+A+A L LQ +AEGVE+ + A + G N QG+LF++P+P F + Sbjct: 1180 LNSIIAIAHTLGLQTVAEGVENNDQLALVANCGCNYIQGYLFSRPLPPEDFVALF 1234 Score = 68.8 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 55/180 (30%), Gaps = 14/180 (7%) Query: 79 LVGRKINKREWAGNASAWHDTPAVARD---LSHGLSFAEQVVSEAHSAIVILDSR--GNI 133 +V RE + D V +D L L A +V + + + + I Sbjct: 105 IVKSPEAIRELPHRVARVLDHWRVRQDNTLLEMELCQANLIVDNSPAVLFHWKAEDGWPI 164 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVF--KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 ++ G + +++ L + R ++ E I T Sbjct: 165 VSVSKNISQ-FGYAQEELMSGDFSYATLVHPKDLDRLEEELQAQINRGERIFQTEYRIIT 223 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE------RLRILANTDSITGL 245 + + ++ FV + DI E +R + RL LA +++ L Sbjct: 224 KQKEVRWVDERTFVERDAAGKVSHYQGFIIDIDERKRTELVMAARMRLLQLATNNTLAQL 283 Score = 61.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 45/159 (28%), Gaps = 11/159 (6%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQ----VVSEAHSAIVILDSRGNIQRFNRLC 140 E A + + T + L +EQ +V A I G + N Sbjct: 404 RDAEAASLLADFAWTTLERKLTEESLQVSEQKYRHIVDHAPFGITRTTRDGKLISANPAM 463 Query: 141 EDYTGLKEH----DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE-LWIPTCKGQ 195 + + IG+ L A R + N++ + L + G Sbjct: 464 ANILKYDSSQELLETIGR--SSLQEVIFSNPADREDMVDKVIISNSWCLHNLSLRCKDGS 521 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + S G DITE+ Q+ L+ Sbjct: 522 LATCRVHSRRLSEKGSQNWEYENFLEDITEQLETQQTLQ 560 Score = 58.4 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 46/151 (30%), Gaps = 2/151 (1%) Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD-SRGNIQRFNRLCEDYTGL 146 E+ + + L +Q+ + + + S E G Sbjct: 541 EYENFLEDITEQLETQQTLQKNKKNIQQLAENTEAVLYEYNLSDNKWTYMAPQVERIFGY 600 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 K D I + + + + R A+ +E G +++ + Sbjct: 601 KPEDWIDNQFWLDRVHEADWGKASREELSKLNQQEAHSIEYRFYKKDGSIVWVRDIIRIE 660 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILA 237 S + DIT+ ++++ +L+ L+ Sbjct: 661 SDAENKLCLH-GLLIDITDSKQSESQLKKLS 690 >UniRef50_A8FYM5 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FYM5_SHESH Length = 1055 Score = 867 bits (2242), Expect = 0.0, Method: Composition-based stats. Identities = 202/572 (35%), Positives = 316/572 (55%), Gaps = 9/572 (1%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 +A + + +++ A V E+ AIVI DS I R N TG + Sbjct: 478 FANRVALELQRQSTHKEME----MAASVFKESAEAIVICDSEDKILRVNPAFYKITGYSQ 533 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 +V+GQS +L S R + N + + ++ E+ G+ ++ Sbjct: 534 IEVVGQSP-QLLQSDRPIQSMLHNREAALKKNDIWQCEVSGYRKNGEHFLSWQTVIPVKD 592 Query: 209 SGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--K 266 + +I +DITE + +E + LA+ DS+T LPNR A Q ++ A+ A + + Sbjct: 593 ENGDTQQIIYIFSDITERKLFEEHIYNLAHHDSLTQLPNRVAFQLQMNTALERAKRSKTQ 652 Query: 267 VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS 326 + V+++DLD+FK +ND GH GD LL+ V+ L + V++R GGDEF VL SNT Sbjct: 653 MAVMFIDLDHFKMINDTSGHPVGDLLLQQVAERFKRALRKEDVISRFGGDEFTVLLSNTR 712 Query: 327 QSALEAM-ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAK 385 + A ++L PF++ EV S S+GI + P++G +++ +AD+AMY AK Sbjct: 713 TDNATTVVARKLLACFYEPFKLPSSEVVISASIGIGVFPDNGDSVDSLMMNADSAMYRAK 772 Query: 386 EGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRW 445 E GR F +T EMNQ E L L+ +LRKALE D+ V+HYQP+ G + EAL+RW Sbjct: 773 EKGRNCFQFYTKEMNQYAQERLELELDLRKALERDEFVLHYQPQFDPNGRIIGCEALIRW 832 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQL 504 Q P++GL+ P +FI+ AE +GLIVP+G+WVI Q W +G L ++VN+S RQ Sbjct: 833 QHPDKGLLSPGEFINMAEITGLIVPIGKWVIDTACMQHKMWLSQGYPALNISVNLSGRQF 892 Query: 505 ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGT 564 + +K + +++ELTES ++ N E + + S LG + +DDFGT Sbjct: 893 LHHDLLETVKNAITTSGITPSCLELELTESIMMVNVEETIRTLNAISSLGIHMSIDDFGT 952 Query: 565 GYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE 624 GYSS+S L RFP++ +K+DQ FVR + + ++V++I+ +A ALNL VIAEGVE+ ++ Sbjct: 953 GYSSMSCLKRFPVNKLKIDQSFVRGLPQDKEDVAIVKSIIVMAHALNLTVIAEGVETLEQ 1012 Query: 625 DAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 FL + E QG+ F++P+ A E++ + Sbjct: 1013 LEFLKSSRCEEFQGYYFSRPILAADIEQYLQA 1044 >UniRef50_Q7NZ89 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NZ89_CHRVO Length = 936 Score = 867 bits (2241), Expect = 0.0, Method: Composition-based stats. Identities = 196/605 (32%), Positives = 308/605 (50%), Gaps = 29/605 (4%) Query: 70 VDESDLSVHLVGRKINKREWAGNASA---WHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 ++ D V + + + R+ G +A + R + A +V I+I Sbjct: 336 LNRFDNQVPVSVKTVAMRDAFGRINAVWRMVRDISEKRAAEERVQLAAKVFENTVEGIMI 395 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D+ I+ NR + TG +H+V+GQ L R + +++ E Sbjct: 396 TDADRRIRSVNRAFTEITGYTQHEVLGQKTSILSSGRHDEP-FYEQMWQSIAEHGSWQGE 454 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 LW G+ + S + +D+TE + A ER++ LA+ D +T LP Sbjct: 455 LWNRRKNGEVYPEWLAINAVRNSLGEITHYVAIFSDLTERKAADERIQFLAHFDVLTSLP 514 Query: 247 NRNAMQDLIDHAINHADNNKVGVVYLDLD------------NFKKVNDAYGHLFGDQLLR 294 NR MQD ++ AI++A D FK VN++ GH GD LL+ Sbjct: 515 NRIHMQDRVELAIHNAVR----------DNQRLALLLLDLDRFKTVNESLGHSAGDTLLQ 564 Query: 295 DVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVY 353 + I S + ++LAR GGDEF++L S A R+ P + + Sbjct: 565 VAADRIKSVMAPGEMLARQGGDEFIILLPVISDPGEAALAAERVRDVFANPIELHNHVLT 624 Query: 354 TSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNL 413 + S+GI++ P+ G D ++R+AD AMY AK GR + +T ++N R E L +++ L Sbjct: 625 ITPSIGISVYPDDGRDYETLVRNADAAMYHAKSSGRNSYKFYTADLNARAREILAIESQL 684 Query: 414 RKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLG 472 R ALE D+ V+HYQP++ G + EAL+RW P GL+ P+ FI AEE G IV +G Sbjct: 685 RFALERDEFVLHYQPQVEMESGRIVGAEALIRWNHPSLGLLGPVRFIQVAEERGFIVQIG 744 Query: 473 RWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVEL 531 WVI + RQ+ +WR G+ L +A+N+SA Q + +KQ L+ +D+E+ Sbjct: 745 NWVIAEATRQLVEWRRAGLPELTLAINLSALQFRQPDLALQVKQALESSGLPGHALDIEV 804 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TES ++E+ + + I +G ++ +DDFGTGYSSLS L RF D +K+D+ FVRDI Sbjct: 805 TESIIMEDAQATIQTIDNMKNMGLRLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIP 864 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 + ++ RAI+ +A+ LN+QV+AEGVE+ ++ FL + G + QG+L AKP+PA F Sbjct: 865 QDADDSAIARAIINMAKNLNMQVVAEGVETMEQWQFLEQEGCDFVQGYLIAKPLPADDFA 924 Query: 652 RWYKR 656 + Sbjct: 925 ELLHK 929 Score = 85.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 61/210 (29%), Gaps = 4/210 (1%) Query: 29 VLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKRE 88 ++ + P + L A A ++ + S L + L K E Sbjct: 171 IMSILHSRFLSPMKLLTEQARLLAELKLDSPFEWSRRDELGRLGTHLEWTRSELKRLVDE 230 Query: 89 WAGNASAWHDTPAVARDLSHGLSF----AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 A A R++ L ++ IVI G + N + Sbjct: 231 LRAKTLALEADIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLM 290 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 + Q+ + L EA + R G E E ++ + Sbjct: 291 CYSLDQLKQQNFWSLVAEESEALERFNLDNKVLRFGYCDEFEATYLNRFDNQVPVSVKTV 350 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLR 234 + + DI+E+R A+ER++ Sbjct: 351 AMRDAFGRINAVWRMVRDISEKRAAEERVQ 380 >UniRef50_Q21WS3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WS3_RHOFD Length = 1034 Score = 864 bits (2235), Expect = 0.0, Method: Composition-based stats. Identities = 187/644 (29%), Positives = 300/644 (46%), Gaps = 16/644 (2%) Query: 21 WRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLV 80 + + + L PD ++A A R +T + D + + Sbjct: 394 EAVAQDAAPLF----ALMHPDDAAGVAASIQASSRALTPWVDEYRVKFG-DGTVRWLSSK 448 Query: 81 GRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLC 140 + + + + L V ++ +IVI D RG I+ N + Sbjct: 449 AAPQKLDDGSVLWHGFVSDVTAHKQAEESLITLSAAVEQSPVSIVISDPRGLIEYVNPMF 508 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 E +G + +V+GQ+ L S ++ R +G+ + E G + Sbjct: 509 EQVSGYRRAEVMGQNPRIL-SSHEKSEDEYREMWATLLAGDIWHGEFHSRRKDGSLFWEQ 567 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 I + DIT+ + A+ + LA D +TGLPNR + D + + Sbjct: 568 AAIAPIFDDHGRPIHYLAIKEDITKRKAAEAEIEHLAFYDLLTGLPNRRLLNDRLQQVLA 627 Query: 261 --HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 ++++DLDNFK +ND GH GD LL+ V+ + C+ +AR GGD+F Sbjct: 628 VGTRSRRHGALLFIDLDNFKNLNDTQGHEQGDVLLQQVAQRLNFCVRECDTVARLGGDDF 687 Query: 319 LVLASNTSQSA------LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTA 372 +V+ + S+ E + +IL L P+ G + S SVG+AL Sbjct: 688 VVMLQDLSEQQTEAATQAEGVGQKILDALHQPYPFGHFTHHGSASVGVALFNASQDTVEE 747 Query: 373 IIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW 432 +++ AD A+Y AK+ GR F P+M + ++ ++R L+ +Q +++YQP++ Sbjct: 748 LLKRADLALYQAKDAGRNTLRFFDPDMQAVISARAEMEADMRLGLQENQFLLYYQPQVNH 807 Query: 433 RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI- 491 G + +EALVRWQ P RGL+ P FI AE++GLI+PLG+WV+ RQ+ WR + Sbjct: 808 AGRLIGVEALVRWQHPLRGLVAPAHFIPLAEDTGLILPLGQWVMEAACRQLQLWRTQAHT 867 Query: 492 -NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQF 550 L +AVN+SA Q ++ + + L + +ELTES L+++ + ++ + Sbjct: 868 AQLTIAVNVSALQFHGESFVSDVLATLARTGAPADRLKLELTESLLVKDVDGVIAKMVAL 927 Query: 551 SQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQAL 610 G LDDFGTGYSSLS L R P+D IK+DQ FV D P +LVRA VA+ + L Sbjct: 928 KAHGVGFSLDDFGTGYSSLSYLKRLPLDQIKIDQSFVSDALSNPKDAALVRATVAMGRGL 987 Query: 611 NLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 + VIAEGVE+ + FL G QG+ F +P+P + Sbjct: 988 GMMVIAEGVETQMQRDFLEGEGCLNFQGYFFGRPVPVAELACFL 1031 >UniRef50_B9Z192 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z192_9NEIS Length = 943 Score = 864 bits (2234), Expect = 0.0, Method: Composition-based stats. Identities = 200/598 (33%), Positives = 311/598 (52%), Gaps = 29/598 (4%) Query: 77 VHLVGRKINKREWAGNASA---WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 V + + + R+ G +A + R + A +V I+I D+ I Sbjct: 345 VPVSVKTVAMRDSFGRINAVWRMVRDISEKRVAEERMQLAAKVFENTVEGIMITDADKRI 404 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 + NR TG + +V+GQ L R + +++ ELW Sbjct: 405 RSVNRAFSQITGFGQQEVLGQKPDMLSSGRHD-ETFYEAMWSAINEHGSWQGELWNRRKN 463 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G+ + + + +D++E + A ER++ LA+ D +TGLPNR +QD Sbjct: 464 GEVYPEWLAISAVRNAVGEITHYVAIFSDLSERKAADERIQFLAHFDVLTGLPNRAHIQD 523 Query: 254 LIDHAINHADNNKVGVVYLDLD------------NFKKVNDAYGHLFGDQLLRDVSLAIL 301 ++ AI +A D FK +N++ GH GD LL+ ++ I Sbjct: 524 RVELAIQNATR----------DNERLALLLLDLDRFKTINESLGHSAGDALLQVLAERIR 573 Query: 302 SCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 S L +V+AR GGDEF+VL + A RI L P + + + S+GI Sbjct: 574 STLLTGEVVARQGGDEFIVLLPLIADPGSAALAAERIREVLEPPVELFNHSISITPSIGI 633 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 ++ P+ G D ++R+AD AMY AK GR + +T ++N R E L +++ LR AL+ D Sbjct: 634 SVFPDDGRDFETLVRNADAAMYHAKSAGRNSYKFYTADLNARAREILEIESQLRYALDRD 693 Query: 421 QLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 + V+HYQP++ GE+ EAL+RWQ PE GL+ P+ FI AEE G IV +G WVI + Sbjct: 694 EFVLHYQPQVDLKTGEIIGAEALIRWQHPELGLLGPVRFIEVAEERGFIVQIGNWVIQEA 753 Query: 480 VRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 RQ+A+WR +G+ + +AVN+S Q Q + L++ L +DVE+TES +++ Sbjct: 754 CRQLAQWRRQGLPRISLAVNLSTLQFRQQDLAVHLQRALSAHGLVGSDLDVEVTESVIMD 813 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 + E + I + +G Q+ +DDFGTGYSSLS L RF D +K+D+ FVRDI + Sbjct: 814 DVETTIHTIDRIKSMGLQLSIDDFGTGYSSLSYLKRFKADKLKIDRSFVRDIPMDADDSA 873 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 + RAI+ +A+ LN+ VIAEGVE+ ++ FL + G + QG+L AKP+PA FER ++ Sbjct: 874 IARAIINMAKNLNMTVIAEGVETIEQWKFLDREGCHAAQGYLLAKPVPAKEFERLLEK 931 Score = 89.9 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 59/210 (28%), Gaps = 4/210 (1%) Query: 29 VLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKRE 88 ++ + +P RTL A A + T + L K E Sbjct: 173 IVGILHSRFLKPMRTLTEQATHLAELHLDTPFLWERKDEIGRLGRHLEWTRAELKRLIDE 232 Query: 89 WAGNASAWHDTPAVARDLSHGLSF----AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 A A R++ L ++ IVI G + N + Sbjct: 233 LRAKTLALESDIARRREVEDALRRSENKYRELFWSNLDGIVISSLDGQVIDANPAFLNLM 292 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 + Q+ + L E + R G E E G + + Sbjct: 293 CYSLDQLKLQNFWSLIAPESEGMERFNLDNKVLRFGYCDEFEASYINRFGNVVPVSVKTV 352 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLR 234 S + DI+E+R A+ER++ Sbjct: 353 AMRDSFGRINAVWRMVRDISEKRVAEERMQ 382 >UniRef50_B1XZA8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Bacteria RepID=B1XZA8_LEPCP Length = 1147 Score = 863 bits (2231), Expect = 0.0, Method: Composition-based stats. Identities = 214/631 (33%), Positives = 315/631 (49%), Gaps = 9/631 (1%) Query: 35 TETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWA-GNA 93 E PD + A I T ++ M D G Sbjct: 515 RERLHPDDRDRSIAAVRNSIEYGTPFVATYRMR-CFDGEYRWFQGRGMCHRDAHGTPQRF 573 Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 S L A QV ++I D+R I NR G E +V+G Sbjct: 574 SGVLTDLTDRLQAEERLRLAAQVFDSTQEGVMITDARRRIVSVNRAFTTLLGYTETEVLG 633 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 Q+ L R + + ++ E+W G + + Sbjct: 634 QTPRMLSSGRHD-RDFYEAMQAQLDHTGLWQGEIWNRHKDGSPVPELLSISAVRDPHGQV 692 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVY 271 + TDIT + ++ RL LA+ D +T LPNR + +D A++ A+ ++ V+ Sbjct: 693 THYVGVFTDITHLKESEARLEFLAHHDPLTHLPNRLLFNNRLDQALHQAEREGRRLAVLL 752 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSAL 330 LDLD FK +ND+YGHL GD+LL+ V+ + L LAR GGDEF +L + Sbjct: 753 LDLDRFKDINDSYGHLAGDELLKYVAQRLTQRLRQSDTLARLGGDEFALLMHDLRHDDDA 812 Query: 331 EAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 +AS +L+ L P+R +EV S+GI + P+HG +++ AD A+Y AK GR Sbjct: 813 ARLASELLSGLSEPWRSSEGVEVSVGVSIGICIYPDHGRTPQTLLQGADAALYRAKGDGR 872 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSP 448 G + + EM + E L ++ LR+AL + QL++HYQP++ G + EALVRWQ P Sbjct: 873 GVYRYYADEMTRIARERLHIEARLRRALADGQLLLHYQPQVDLRSGRIIGAEALVRWQDP 932 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQ 507 E+GLIPP+ FI AE +GLI +G WV+ + RQ W D G+ L VAVN+S RQ Sbjct: 933 EQGLIPPVRFIPVAEATGLIGEIGAWVLGEACRQARAWLDAGLPALTVAVNVSPRQFHQA 992 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 + T + QVL E +++ELTE L+E + AL V+Q+ LG V +DDFGTGYS Sbjct: 993 DLATQVMQVLVETGLPPTHLELELTEGALMEREAEALQVLQRLRGLGVGVAIDDFGTGYS 1052 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SL+ L RFPID +K+D+ F+ DI P + AI+A+ +L + V+AEGVE+A++ AF Sbjct: 1053 SLASLKRFPIDVLKIDRSFITDIPDDPDDMEIAAAIIAMGHSLGILVLAEGVETAEQLAF 1112 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 L + + QGFL ++P+PA AFE+ + Sbjct: 1113 LQQRNCDRYQGFLRSRPLPAQAFEQLLREQA 1143 Score = 85.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 33/241 (13%), Positives = 63/241 (26%), Gaps = 20/241 (8%) Query: 6 ESTTLYNFLGSHNPYW--------RLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREM 57 E + + R + E+ + Sbjct: 84 EVNRRFAEIVGRTVEETQRLRFQDITHPDDLAADLDKVADLLAGRIDRYRMEKRYLRPDS 143 Query: 58 TVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVV 117 + I +L +SL R++ DL +Q++ Sbjct: 144 STIWVTLTVSLARGAD----------GQPRQFISVVQDITAVKQAEGDLLRQRRQLQQII 193 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 + + D G N E GL E ++ G+++ +++ A RR +R+ Sbjct: 194 QSIPDCVAVRDLDGRYLLANPAAERLIGLSEAEICGRTLEQIYPEPEAGQA-RRADRLAL 252 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 E G + G +I G D++ R RL A Sbjct: 253 SQNGLVRREASYTAADGSVATVDLAISPLLGIDGRATGIISVGRDVS-RERHNLRLLEQA 311 Query: 238 N 238 + Sbjct: 312 H 312 Score = 76.1 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 37/135 (27%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 VV++A I + G + NR + G + Sbjct: 45 IRRAARAQEQAEQAHKRVADVVADAAVGISLTALDGRLTEVNRRFAEIVGRTVEETQRLR 104 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 + AA + + + Y +E +++ + G+ Sbjct: 105 FQDITHPDDLAADLDKVADLLAGRIDRYRMEKRYLRPDSSTIWVTLTVSLARGADGQPRQ 164 Query: 216 LICSGTDITEERRAQ 230 I DIT ++A+ Sbjct: 165 FISVVQDITAVKQAE 179 Score = 52.2 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 73/261 (27%), Gaps = 41/261 (15%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS---- 63 L + + + + E + R +L+ Q +R T++ Sbjct: 213 NPAAERLIGLSEAEICGRTLEQIYPEP-EAGQARRADRLALSQNGLVRREASYTAADGSV 271 Query: 64 ------LMMSLTVDESDLSVHLVGRKI-NKREWAGNASAWHDTPAV-------------- 102 + L +D + VGR + +R H Sbjct: 272 ATVDLAISPLLGIDGRATGIISVGRDVSRERHNLRLLEQAHRRNHELLAEAERSRLALLS 331 Query: 103 --------ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 + L+ VV+ I + D+ G I +D + VIG+ Sbjct: 332 LLEDQQLGQQALAASERHLRAVVAALPDLIFLFDADGVIVDLWASQQDKLLMPREQVIGR 391 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 ++ L A A RV E +P G+ F + Sbjct: 392 AIADLLPPSLTATALHHIARVLAEDAAQI-FEYTLPLPDGEHGFEM------RMARAGSR 444 Query: 215 FLICSGTDITEERRAQERLRI 235 ++ DIT ER A+ L+ Sbjct: 445 EVLAIARDITAERDARAALQR 465 >UniRef50_B3PKJ2 EAL domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKJ2_CELJU Length = 798 Score = 861 bits (2227), Expect = 0.0, Method: Composition-based stats. Identities = 210/655 (32%), Positives = 344/655 (52%), Gaps = 13/655 (1%) Query: 17 HNPYWRLTESSDVLRFSTTETTEPDR------TLQLSAEQAARIREMTVITSSLMMSLTV 70 H L F E ++A RI M+ Sbjct: 135 HREGAVLDMQVGSYVFDMGEWLHSAEDGSYHLPSDIAALIGTRIDAALRGKGMQMLEFQW 194 Query: 71 DESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR 130 + V +I R+ R + L +V ++ AI+I D+ Sbjct: 195 SRDPMCVRHWEARIVPRD-RQEVLLVVREITQRRQQENQLRLWAKVFEASNEAILITDAN 253 Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIP 190 I NR E G +E DV+G + ++ + + RN + ++ EL Sbjct: 254 FRIISVNRAYETIMGYREQDVLGVDTLE-VGAKLQTYSFYRNLVSLLKERGHWQGELINQ 312 Query: 191 TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNA 250 G+ + + + S I DITE + ++ ++ LA+ D++TGLPNR Sbjct: 313 RKSGEEFPSWFSVTQVTNSRGEPEHYIAIFNDITEHKNSRAQIEFLAHHDALTGLPNRIL 372 Query: 251 MQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQ 308 + D ++ AI K+G++++DLD FK VND+ GH GDQ+L++ + + + + Sbjct: 373 LNDRLEMAITQVRRQGEKLGILFIDLDRFKNVNDSLGHGVGDQILQEAAKRLTANVRTGD 432 Query: 309 VLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHG 367 ++R GGDEF+VL L + ++ +L+LP+ + I ++ + S+GIA+ P+ G Sbjct: 433 TVSRLGGDEFVVLFPRVRTEGNLADLTIKLREQLQLPYTVDGISLHITPSIGIAVYPDDG 492 Query: 368 SDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQ 427 D +I++AD AMY AKE GR + +TP +N + + L L+++LR A++ +HYQ Sbjct: 493 EDPNTLIKNADAAMYLAKEKGRNNYQFYTPTLNAKTLDRLKLESDLRSAIDAGDFELHYQ 552 Query: 428 PKI-TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW 486 P+I G++ LEAL+RW+ ERGLI P +FI AEE+GLIV LG WV++ V+Q+A+W Sbjct: 553 PQIIGSSGQLWGLEALIRWRHRERGLISPAEFIPLAEETGLIVGLGDWVLVQAVKQLAEW 612 Query: 487 RDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALS 545 R +G +L V+VNISA Q +K +LQE I++ELTE+ L+++ + A+ Sbjct: 613 RRQGHNHLVVSVNISALQFRQGDFLDRVKHILQEAQLVPDAIELELTETMLMQDVQSAIQ 672 Query: 546 VIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVA 605 ++ +LG ++ +DDFGTG+SSL+ L PI+ +K+DQ FVR++ ++P S ++V +I+A Sbjct: 673 TLKGLRELGFRIAIDDFGTGFSSLNYLRHLPINVLKIDQSFVREMLQEPESLAIVESIIA 732 Query: 606 VAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 +AQAL + IAEGVE+ E L G QG+ FA+PMP V F++WY++ + Sbjct: 733 LAQALGKETIAEGVETRAEFDVLQARGCRLMQGYFFARPMPPVIFDQWYQQQTQS 787 >UniRef50_Q1H367 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H367_METFK Length = 1070 Score = 861 bits (2227), Expect = 0.0, Method: Composition-based stats. Identities = 196/593 (33%), Positives = 320/593 (53%), Gaps = 10/593 (1%) Query: 69 TVDESDLSVHLVGRKINKR-EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL 127 D + + + R I R + L+ ++QV AI+I Sbjct: 455 AADGRTVWLQDIVRVIPDRFGKPQELFGVMLDITDRKAAEESLNLSKQVFDNTSEAILIA 514 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 D NI N+ D TG D +G + L E A + + + EL Sbjct: 515 DRDRNILEVNQAYLDMTGYGREDCVGTYLALL----DEPAGGGQLIGNLVQQHGKWMGEL 570 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPN 247 G+ + + + + + TDI++ ++A+ERL+ LA D +TGLPN Sbjct: 571 LAQKRSGEYYPAWVSISTVHDNHGSLQNYVVVLTDISQRKQAEERLQFLATHDGLTGLPN 630 Query: 248 RNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLE 305 R +Q+ ++ A+ A + VGV+++DLD FK +ND GH GD LL++V+ + CL Sbjct: 631 RTLLQERMELAVLRAQRYQQCVGVLFIDLDRFKIINDTLGHQAGDVLLQEVAGRLGECLR 690 Query: 306 HDQVLARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSP 364 +AR GGDEF+VL + Q L +A +I+ L PF + E+Y S S+GI++ P Sbjct: 691 QTDTIARQGGDEFVVLVEDFIEQQYLVNVARKIMHALAQPFILMQQELYISASIGISVYP 750 Query: 365 EHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVI 424 + G D ++++++AD AMY AK+ G+ F ++ + N L L+ +LR+ALE ++ + Sbjct: 751 DDGVDISSLLKNADMAMYRAKDDGKNTFHFYSADGNANSVSRLTLENSLRRALERNEFSL 810 Query: 425 HYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQV 483 YQ K+ + + EAL+RW S E G++ P DFI AEE+G+I+ +G WV+ R Sbjct: 811 LYQAKLDLAEQNIIGAEALIRWHSAELGMVSPQDFIPVAEETGMIIEIGEWVLQQACRDA 870 Query: 484 AKWRD-KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDEL 542 W++ G +RV VNISARQ + +++ A+ L+E +++E+TES +++N E Sbjct: 871 CHWQEVAGRPIRVGVNISARQFREDSLYQAISNALEESGLTPNCLELEITESMIMQNAER 930 Query: 543 ALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRA 602 A ++Q F LG+ V +DDFGTGYSSL L FPID++K+D+ FVRDI + ++ +A Sbjct: 931 ASQMLQHFRNLGSYVLIDDFGTGYSSLGYLKHFPIDSLKIDRSFVRDIPQDSDDMAITQA 990 Query: 603 IVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 I+A+A +L + V+AEGVE+ + FL G ++ QG++F++P+ F + Sbjct: 991 IIAMAHSLKINVVAEGVETQAQLEFLRGQGCDQLQGYIFSRPLVVEDFVGLLR 1043 Score = 70.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 27/233 (11%), Positives = 65/233 (27%), Gaps = 13/233 (5%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + +G ++ S S ++ +R Q + RIR + Sbjct: 273 YANEAVRKIGGYDARDI---SMGSSFLSLIHPSDRERVAQHYKQ---RIRGEYTPSRYEA 326 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF----AEQVVSEAH 121 ++++ + + + N R+ + + + L ++V Sbjct: 327 LAISKLGKPIPIEVAA--ANYRDGSERIVVLIIDISSRKQAEEALLQSRAEYRKLVESVK 384 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 + + ++ E G + + F + + + Sbjct: 385 AVVWRATPEAAFTFVSQEAESLLGYPVREWTSNTSFWVDKLHPDDRPWVVDFCARETRQL 444 Query: 182 AYEV-ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 V E + G+ ++L V L DIT+ + A+E L Sbjct: 445 KDHVLEYRMRAADGRTVWLQDIVRVIPDRFGKPQELFGVMLDITDRKAAEESL 497 Score = 64.9 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 39/141 (27%), Gaps = 12/141 (8%) Query: 103 ARDLSHGLSFAEQVVSE-------AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV-IGQ 154 L + + A ++++ G I N G D+ +G Sbjct: 235 RLQADERLRQQLGLYNALSNAQSDAGEGVMVI-EDGKIIYANEAVRKIGGYDARDISMGS 293 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 S L ++ + E + G+ + + + + Sbjct: 294 SFLSLIHPSDRERVAQHYKQRIRGEYTPSRYEALAISKLGKPIPIEVAAANYRDGSERI- 352 Query: 215 FLICSGTDITEERRAQERLRI 235 + DI+ ++A+E L Sbjct: 353 --VVLIIDISSRKQAEEALLQ 371 >UniRef50_B9YY70 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YY70_9NEIS Length = 1054 Score = 861 bits (2225), Expect = 0.0, Method: Composition-based stats. Identities = 206/614 (33%), Positives = 316/614 (51%), Gaps = 8/614 (1%) Query: 48 AEQAARIREMTVITSSLMMSLTVDE--SDLSVHLVGRKINKREWAGNASAWHDTPAVARD 105 Q + S + LT + D+ + + ++ A + D + + Sbjct: 436 PAQRGPRLAALLPPSDQPLPLTYETVLDDVPFEVSLTSMQYQDHAYRSLRARDM-SRRQQ 494 Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 A ++ + AIVI D+ +I NR D TG + IG+ L S R+ Sbjct: 495 AEQQQRLAAKIFDTSSQAIVISDASNHIVMVNRAFTDITGYSAQEAIGRQPS-LLSSGRQ 553 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 A + + E+W G + + + + +DI+E Sbjct: 554 PPAFYQKMWQQLAQRGHWAGEIWNRRKDGTIYPEWLSISLLRDEAGQVSHHVALFSDISE 613 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDA 283 + + +R +A D +T LPNR + D + AI A N++ V++LDLD+FK +ND Sbjct: 614 RKEQEAHIRHMAEHDFLTDLPNRALIHDRLAQAIRAAARQKNRLAVLFLDLDHFKNINDT 673 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLR 342 GH GD+LL+ V+ + + + R GGDEF+++ S + +A R+L LR Sbjct: 674 LGHAHGDELLKQVAQRLQHTVRGSDTVGRNGGDEFVLIVPELASPAEAAQLAQRLLDDLR 733 Query: 343 LPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQR 402 PF+I + S S+GI+L P++GS+ ++ AD AMY AK GR ++ FTPE+N + Sbjct: 734 RPFQIDGQALAISTSIGISLFPDNGSELQELLVSADLAMYHAKAQGRNRYQFFTPELNAQ 793 Query: 403 VFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISY 461 V E L L+ +LR+ALE QL + YQP+ + EAL+RWQ PE+GLI P FI Sbjct: 794 VAERLTLENHLRQALERQQLYLVYQPQFAIDNRRLVGCEALLRWQHPEQGLISPARFIPL 853 Query: 462 AEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELN 521 AEE+GLIV +GRWV+ + RQ A W G LRVAVN+SARQL + ++ L Sbjct: 854 AEETGLIVEIGRWVLDEACRQAAAWLAAGTPLRVAVNVSARQLGQPDLLAEVEAALARHR 913 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 C +++E+TES L+E+ E A+ +Q F + G + +DDFGTGYSSL+ L RF D IK Sbjct: 914 LPSCWLELEVTESTLMEDAEQAVRHLQAFKERGIHLAVDDFGTGYSSLTYLKRFSPDLIK 973 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ FV ++ ++V AIV +A+AL +Q +AEGVES ++ FL + G + QG+L Sbjct: 974 IDRAFVMNLPDNRDDAAIVSAIVQLAEALGMQTLAEGVESEEQLDFLAQAGCDVVQGYLT 1033 Query: 642 AKPMPAVAFERWYK 655 +P A Sbjct: 1034 GRPQSAGELTAQLA 1047 >UniRef50_B8DLV2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DLV2_DESVM Length = 896 Score = 860 bits (2224), Expect = 0.0, Method: Composition-based stats. Identities = 187/570 (32%), Positives = 289/570 (50%), Gaps = 6/570 (1%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 A + R E+V A I I D G I N TG D Sbjct: 314 TALVVVHDISGRRTAERQARLFERVFRNALEGICITDPEGIIVAVNPAFTTITGYPADDA 373 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 +GQS L S +A + +E E+W G+ + + G Sbjct: 374 VGQSPR-LLKSHHHDSAFYEDMWRALVEEGRWEDEIWNRRRNGEVYPEWLSISAIPGPTG 432 Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGV 269 + + DITE + + +++ A+ D++TGLPNR ++D + AIN A KV V Sbjct: 433 RTEYYVAVFHDITELKAKESQIQHQAHHDALTGLPNRALLRDRLGMAINGARREDRKVAV 492 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQS 328 + +DLDNFK+VND+ GH+ GD L+ + + + LAR GGDEF+V+ + + Sbjct: 493 LSVDLDNFKQVNDSLGHMVGDIYLQQAAEQMRQMVRPQDTLARVGGDEFVVVLQDVEGER 552 Query: 329 ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 +A R+L R P R+ E++ SVGIAL P+ G D ++R+AD AM AKE G Sbjct: 553 DAAQVAERLLARFTDPVRVQEHELFVGASVGIALFPDDGDDPDTLVRNADIAMSRAKEQG 612 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQS 447 + ++ +FTP MN R L L+ +L +AL + HYQP++ G + +EAL RW Sbjct: 613 KRRYHLFTPAMNDRAVRRLSLEGDLHRALAAGDITAHYQPRVDLNTGLITGMEALARWIR 672 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLAD 506 + P +FI AE +GLIVPLG ++ + D G +L VAVN+S Q Sbjct: 673 ADGSQEHPAEFIPLAESTGLIVPLGEHMLRLACAKTRALCDAGHADLHVAVNLSVHQFRH 732 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 + + + VL E +++E+TES ++ + + + + Q +++G + +DDFGTGY Sbjct: 733 RNLVGMVADVLAETGLPPHLLELEITESTIVTDVDHTIRKLNQLAEMGIALSVDDFGTGY 792 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSL QL P+ ++K+D+ F+RDI P ++ I+ +A L L+V+AEGVE+ ++ Sbjct: 793 SSLYQLKNLPLTSLKIDRSFIRDIPDDPNDAAIAATIITMADRLGLRVVAEGVETPEQLN 852 Query: 627 FLTKNGINERQGFLFAKPMPAVAFERWYKR 656 FL G +E QGFLF++P+P F R Sbjct: 853 FLLLEGCHEVQGFLFSRPLPPDEFTALLAR 882 Score = 54.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 42/161 (26%), Gaps = 5/161 (3%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFST--TETTEPDRTLQLSAEQAARIREMTVITSSLM 65 LY L + S + + + DR + + R + + + Sbjct: 75 NHLYADLAGVPGKDVVGLSPRDIFPHAVASALLDEDRRVAEDSTPLLCERMLPADEAERV 134 Query: 66 MSLTVDESDLSVHLVGRKINKR-EWAGNASAWHDTPAVAR--DLSHGLSFAEQVVSEAHS 122 + V G + + A + R L+ + + A Sbjct: 135 FRVAKLPLPPEVAGPGAVLGLAFDVTALVEAEIEEEVRQRTAALAESTARFRALFELAPD 194 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 A+ + G I NR E +G ++ L Sbjct: 195 AVYVRGEGGRIVDCNRAAERMSGHPRETLLSLRTADLLPPD 235 >UniRef50_Q20JY5 Sensory box/GGDEF family protein n=1 Tax=uncultured bacterium RepID=Q20JY5_9BACT Length = 874 Score = 860 bits (2224), Expect = 0.0, Method: Composition-based stats. Identities = 196/668 (29%), Positives = 326/668 (48%), Gaps = 25/668 (3%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + + + + L + + E +P TL+ E IRE I Sbjct: 213 RKIIYMNPAGAEMHGYQVEELLGQDVSMFV--PPEHRKP-LTLERIKEWKGLIRESVNIR 269 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 L S++ + G + + R V+ A Sbjct: 270 KDGTTFLVWLMSEIVKNAKGEPFAIVTSCEDITERKQAEEALRKSEERYRI---VLESAP 326 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 +V+ D+ G + FN G + IG+++ L E + G Sbjct: 327 DPVVVYDTEGKVAYFNPAFSRVFGWTLDESIGRNIDFL---PVENVPENKLIFEKINCGK 383 Query: 182 AYEV-ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 E + T G+++ + + + I + DITE ++ +E ++ LA D Sbjct: 384 TLSGIETYCLTKDGKKVGVNISGAGFFDNHDKLQGSIITLQDITERKKTEEEIKFLAYHD 443 Query: 241 SITGLPNRNAMQDLIDHAINHA----------DNNKVGVVYLDLDNFKKVNDAYGHLFGD 290 +TGL NR + ++ + + +K + +LD+D FK VND GH GD Sbjct: 444 VLTGLLNRKSFYTRLEDELIRSYSYDGDRRRIKGHKWALFFLDVDRFKYVNDTLGHDVGD 503 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGL 349 +LL+ V++ + +CL + R GGDEF ++ ++ + + +A +I + P RI Sbjct: 504 ELLKVVAVRLKNCLRKSDYIFRLGGDEFTIILNDLTDDTDMAKVAQKIRKAIARPCRIKD 563 Query: 350 IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG-QFCVFTPEMNQRVFEYLW 408 E+Y + S+GI++ P+ G D ++++AD AMY AKE + F EMN++ E + Sbjct: 564 HELYITVSIGISIYPDDGDDVETLVKNADIAMYAAKEE--NQGYRFFIEEMNRKTLERMM 621 Query: 409 LDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 L+ NLR AL++DQL+I+YQP + ++ +EAL+RW PE GLI P FI AEE+GLI Sbjct: 622 LENNLRNALQHDQLIIYYQPLVDSTNQIVGMEALLRWHHPELGLISPSQFIPLAEETGLI 681 Query: 469 VPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPI 527 VP+G+WV+ +Q KW + G VAVN+S RQ + + ++Q+L+ + + Sbjct: 682 VPIGKWVLRCACQQARKWHEMGYTRFYVAVNLSVRQFREPDLVETIEQILEATDLPPDCL 741 Query: 528 DVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFV 587 +E+TES ++E+ E A++ ++ G +DDFGTGYSSLS L RFPID +K+D+ FV Sbjct: 742 KLEVTESGIMEHPEQAIAKMKMLRAKGIHFSIDDFGTGYSSLSYLKRFPIDTLKIDRSFV 801 Query: 588 RDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 D Q +++ I+A+A+ L + +AEGVE+ ++ FL +G + QG+ F +PMPA Sbjct: 802 IDSTTNKDDQEIIKTIIAMARNLGMDTVAEGVEAKEQQDFLIHHGCHMMQGYYFGRPMPA 861 Query: 648 VAFERWYK 655 FE + Sbjct: 862 EKFEDMLQ 869 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 41/135 (30%), Gaps = 10/135 (7%) Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + L +Q V I I D I N + G + +++GQ V Sbjct: 185 RKRAEKHLRQLKQAVETMQLGITITDLDRKIIYMNPAGAEMHGYQVEELLGQDVSMFVPP 244 Query: 163 RREAAASRRNNRVFFRSGNAYEV---ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 ++ E G ++ + + ++ S Sbjct: 245 EHRKPL-------TLERIKEWKGLIRESVNIRKDGTTFLVWLMSEIVKNAKGEPFAIVTS 297 Query: 220 GTDITEERRAQERLR 234 DITE ++A+E LR Sbjct: 298 CEDITERKQAEEALR 312 >UniRef50_A0LAF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LAF7_MAGSM Length = 951 Score = 859 bits (2222), Expect = 0.0, Method: Composition-based stats. Identities = 188/567 (33%), Positives = 311/567 (54%), Gaps = 6/567 (1%) Query: 100 PAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 AR+ L A+QVV A AIVI + + I N E TG H+V+G++ Sbjct: 373 IHEARETEQQLLLAKQVVQTASEAIVITNHKNQIMDVNPAYERITGFMRHEVLGRNPKIT 432 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 R +A+ + G + E+W G+ + + Sbjct: 433 QSGRHDASFYATMWKHLVGEG-HWSGEIWDRRRNGEIFPKWLAISAIRNRQGVISHFVGV 491 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNF 277 DI+ ++ +++L L D +T LPNR +D + H + A+ + + ++ +DLD F Sbjct: 492 FNDISRQKSTEQQLERLVFYDPLTQLPNRVLFRDRLIHEVGVAERSNKLMSLLLVDLDRF 551 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASR 336 K +ND GH GD+LL VS +++ + +AR GGDEF ++ +A Sbjct: 552 KIINDTLGHGVGDELLLQVSKRLIASVRKSDTVARLGGDEFAIILPGMERAEDAAHVAET 611 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 I+ +L++PF I E++ S+GIA+ + G D ++ +AD AM+ AKE G+G + FT Sbjct: 612 IINQLQVPFSIEENELFVGASIGIAVHGQDGDDYDSLTMNADAAMFKAKESGKGTYKFFT 671 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPP 455 P+MN + + L ++ LR+A++N +L++HYQPK+ + +EALVRW P RG+IPP Sbjct: 672 PDMNIQNAKRLVMEAELRRAVDNQELMLHYQPKVDAESRQIVGMEALVRWVHPTRGVIPP 731 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALK 514 +FI AEE+GLIVPLG V+ QV +W D G+ ++VAVN+S RQ + + + Sbjct: 732 GEFIPLAEETGLIVPLGELVLTRACAQVKQWWDMGLPQVQVAVNLSPRQFQEPNLIEKVS 791 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 ++L++ F +++E+TES + + + + +++ LG ++ +DDFGTGYSSLS L + Sbjct: 792 EILRKTGFPATGLELEITESIAMHDVDNTIETVKKLKDLGVRISIDDFGTGYSSLSYLKK 851 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 FP+ A+K+DQ FVRD+ S++ +I+++A+A+ L V+AEGVE+A++ FL Sbjct: 852 FPLHALKIDQSFVRDLGGDDDGASIISSIISMAKAMALGVVAEGVETAQQMEFLRGQECQ 911 Query: 635 ERQGFLFAKPMPAVAFERWYKRYLKRA 661 + QGF +KP+P F +R + Sbjct: 912 QVQGFFLSKPLPPSDFLALLERQQETG 938 >UniRef50_A1SZA9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Psychromonas ingrahamii 37 RepID=A1SZA9_PSYIN Length = 777 Score = 859 bits (2221), Expect = 0.0, Method: Composition-based stats. Identities = 193/624 (30%), Positives = 313/624 (50%), Gaps = 13/624 (2%) Query: 43 TLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAV 102 L + A + + DE L + K N + Sbjct: 156 WLNIEANLGITETDCLAAVIDITDRKRADEELLFQNDEKGKRTDELVIANKELFFQNAEK 215 Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMS 162 + + L A V + + D+ I R N+ + +G +VIGQS KLF S Sbjct: 216 EKRVGE-LRVAATVFE-TQEGMFVTDANLCILRVNKAFTNISGYSGEEVIGQSP-KLFNS 272 Query: 163 RREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 R+ A + + +A+ E+ + G + + D Sbjct: 273 GRQDKAFYKEMWNSINTTDAWRGEVSNRSKSGDIYAKNLTITAVRDGKGVVSNYVATFRD 332 Query: 223 ITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA--INHADNNKVGVVYLDLDNFKKV 280 IT + A E++ LA D +T LPNR + D + H I+ N +++LDLDNFK + Sbjct: 333 ITTSKAASEKINNLAYFDPLTQLPNRRMLLDSLRHVLTISARSNQHCALLFLDLDNFKTL 392 Query: 281 NDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASR---- 336 ND GH GD LL+ V+ + C+ ++AR GGDEF+VL N S A+EA Sbjct: 393 NDTLGHDVGDLLLQQVATRLTDCVREGDIVARLGGDEFVVLLENLSLQAIEAANKAKKVA 452 Query: 337 --ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 I+ L +++ + +++ S+G+ + + + +++ AD AMY +K GR + Sbjct: 453 KKIIFELAQYYQLNMHRYHSTTSIGVTIFSGNETGIEELLKQADIAMYQSKAAGRNTWHF 512 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIP 454 F M + + ++ +LRKA+E++Q +HYQ +++ G+ EAL+RWQ PERG + Sbjct: 513 FNKTMQESIIARADMERDLRKAIEDNQFQLHYQAQVSSSGQTLGAEALIRWQHPERGQVS 572 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTA 512 P +FI AEE+GLI+P+G+WV+ Q+ W+ + +L +AVNISA+QL + Sbjct: 573 PFNFIPLAEETGLILPIGQWVLDSACAQLKAWQKNPLTQDLVLAVNISAKQLHQEDFVEQ 632 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 +K L+ + + +ELTES L+EN ++ + S++G LDDFGTGYSSL L Sbjct: 633 VKATLKRHDINPARLKLELTESMLVENISDIITKMNILSKIGISFSLDDFGTGYSSLQYL 692 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 + P++ IK+DQ FVRD+ +++VR I+ ++ +L++ VIAEGVE+ +E +L NG Sbjct: 693 KKLPLNQIKIDQSFVRDLITDASDRAIVRTIITMSHSLDISVIAEGVETVEERQYLLDNG 752 Query: 633 INERQGFLFAKPMPAVAFERWYKR 656 QG+LF+KP+P FE K+ Sbjct: 753 CTHYQGYLFSKPVPINEFEVLLKK 776 Score = 46.0 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 27/201 (13%), Positives = 64/201 (31%), Gaps = 18/201 (8%) Query: 40 PDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDT 99 P ++ +LS++ R E + L + ++ S + + I++ + + Sbjct: 4 PAKSTKLSSKTLRRRAE-----AQLKTQTEIKQTIPSDYAAKKMIHELQVHQIELEMQNE 58 Query: 100 PAVARDLSHGLS-FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 ++ L ++ A + +G I + N ++ +++G+ Sbjct: 59 ELKQARIAEKLHYRYTELFEFAPIGYFSFNLKGVINQVNLRGASLLDIERANLVGKQFSN 118 Query: 159 LFMSRREAAASRRNNRVFFRSGNAYEVELW---IPTCKGQRLFLFRNKFVHSGSGKNEIF 215 + ++ R F E+ + N G E Sbjct: 119 CLTA-QDRNKFNRCLAKAFAGDGIQSFEVLAQVGKHK------CWLNIEA--NLGITETD 169 Query: 216 LICSGTDITEERRAQERLRIL 236 + + DIT+ +RA E L Sbjct: 170 CLAAVIDITDRKRADEELLFQ 190 >UniRef50_B9Z1R5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z1R5_9NEIS Length = 1086 Score = 859 bits (2220), Expect = 0.0, Method: Composition-based stats. Identities = 196/657 (29%), Positives = 322/657 (49%), Gaps = 17/657 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + + E + + + +L + R+ E I Sbjct: 428 YVNDKLAEMLGYPGEELQGERIETV-------LAHEERQRLRQQITQRLSENISIMHFSA 480 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + D L V + R R + D + A +V A I+ Sbjct: 481 RLVRKDGQLLDVEIHSRLFEYRGRSAIIGVVVD-ISDRVQADANQKLASKVFENAAEGIL 539 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I + I N+ TG VIG+ R+ + ++ Sbjct: 540 ITGADYRIIAVNQAFTRITGYPPELVIGRVSRIF----RDNTSWSVAMLDGLARHGHWQG 595 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+ + + + DIT ++A+ERL+ LAN D +T L Sbjct: 596 EMLDRRRSHEWYPAELSISAVRDDAGAITNYVGVFADITVRKQAEERLQFLANHDPLTRL 655 Query: 246 PNRNAMQDLIDHAINH--ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR+ + ++ I + +V V++LDLD FK +ND++GH GD+LLR+ + + Sbjct: 656 PNRSWLIACLEDRIQQIASSGQQVAVMFLDLDRFKLINDSFGHQTGDELLRETASRLEQV 715 Query: 304 LEHDQVLARPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 + +AR GGDEF +L S+ SQ+ L +A IL L P + E+ + S+GI++ Sbjct: 716 VGGRGQIARLGGDEFTLLVSHFASQATLSTLAEDILAVLAQPLWLEGQELIVTGSLGISV 775 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 P GSD+ ++++AD AMY AKE G+ + F EMN + E L L+ LR+ALE + Sbjct: 776 YPHDGSDARTLLKNADVAMYRAKEAGKNTYQFFAAEMNAQAIERLQLERGLRQALERGEF 835 Query: 423 VIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 +H+QP + + +LE L+RW+ PE GL+ P+ FI AEE+GLI P+G WVI R Sbjct: 836 ELHFQPIVAAATYRLEALEVLLRWRHPELGLVSPVRFIPLAEETGLIRPIGDWVIRQACR 895 Query: 482 QVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Q+A+W G+++ R+A+N+SARQ Q + + L E +++E+TES +++N Sbjct: 896 QLAEWDCLGLHVPRLAINLSARQFEQQGLIMQVAGALAEAGIAAGRLELEMTESMVMQNP 955 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 A+S++ + LG ++ +DDFGTGYSSLS L RFP+D +K+D+ F+ + + ++ Sbjct: 956 SEAVSLLGELKALGVRLSIDDFGTGYSSLSYLKRFPLDTLKIDRSFIEGLPGDGDNAAIA 1015 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 AI+A+A+ L+ V+AEGVE+ + AFL G QG+LF++P+PA + ++ Sbjct: 1016 EAILAMARKLSFSVVAEGVETEAQAAFLCAKGCQLLQGYLFSRPLPAAELPAFLQQR 1072 Score = 89.2 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 59/225 (26%), Gaps = 7/225 (3%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 Y+ P + + S ++ Q+ + +R E T+ L Sbjct: 305 VNRAYSRALGKAPAELIGKKSADFLPPEEARATAEQDRQVLSALESRQYEQTLTLDGLPG 364 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 V L A+ + + ++ ++ I I Sbjct: 365 DFLV----TKFPLFDADGLPAGIGCIATDITQNKRERQAKQEAENRYHALIEQSLVGIYI 420 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 L + N + G ++ G+ + + ++ + + + Sbjct: 421 L-QDECLAYVNDKLAEMLGYPGEELQGERIETVLAHEERQRLRQQITQRLSENISIMHFS 479 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 + GQ L + + +I DI++ +A Sbjct: 480 ARLVRKDGQLLDVEIH-SRLFEYRGR-SAIIGVVVDISDRVQADA 522 Score = 74.5 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 60/181 (33%), Gaps = 13/181 (7%) Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 S + L + L++ LV + A+ R L L+ E + + Sbjct: 237 SFQPVPLPANGIVLNLALVLSAQLVATQSEAAARRI------RQLQDSLARFEAWLRNSP 290 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 + + + D G NR G ++IG+ EA A+ +R + Sbjct: 291 NVMSLKDLEGRYLLVNRAYSRALGKAPAELIGKKSADFLPPE-EARATAEQDRQVLSALE 349 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR-----AQERLRIL 236 + + E + T G KF + + C TDIT+ +R + R Sbjct: 350 SRQYEQTL-TLDGLPGDFLVTKFPLFDADGLPAGIGCIATDITQNKRERQAKQEAENRYH 408 Query: 237 A 237 A Sbjct: 409 A 409 >UniRef50_Q1K2Z8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2Z8_DESAC Length = 1288 Score = 858 bits (2219), Expect = 0.0, Method: Composition-based stats. Identities = 201/628 (32%), Positives = 322/628 (51%), Gaps = 12/628 (1%) Query: 42 RTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNAS---AWHD 98 R Q S QA + ++ + + + + + E + + H+ Sbjct: 661 RLYQRSPFQAVASFPIQPKQAAGALLVVYTQDKKLLEQDDEQQLLDELVQDVAFALDVHE 720 Query: 99 TPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 L A V + IV+ D I NR D TG ++ +V+GQ+ Sbjct: 721 HEQQQAFSMKQLQLAATVFDNSREGIVLTDKNEKIVSVNRAFSDITGYRDDEVLGQTPRI 780 Query: 159 LFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLIC 218 L +R +N ++ E+W GQ + + I Sbjct: 781 LKSNRH-GRDFYQNMWHCLAEHGCWQGEIWNRRKDGQVYPELMSMSAVCDDQQEVSHYIA 839 Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDN 276 TDI++ + +QE+L L+ D +T LPNR+ +D A+ HA+ + V+ DLD+ Sbjct: 840 VFTDISQAKESQEKLDYLSWHDPLTDLPNRSLFCTHLDQAVKHAERKHHSFAVLCFDLDH 899 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMAS 335 FK VND++GHL GD LLR ++ + SCL +LAR GGDEF++L + + S + MA Sbjct: 900 FKDVNDSFGHLVGDALLRKIADRLRSCLRESDMLARLGGDEFVLLLEDVADSHRVTMMAE 959 Query: 336 RILTRLRLPFRIGLI--EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 IL +L+ P + EV S SVGIA+ PEHG D+ +++ AD+A+Y AK+ GR +F Sbjct: 960 EILHQLQQPICLTETDLEVQVSVSVGIAVYPEHGRDALELLQRADSALYRAKQHGRARFA 1019 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGL 452 + EM ++ E + L +LR+ALE + ++YQP++ G++ EAL+RW SPE GL Sbjct: 1020 YYNEEMTEQAQERVQLSFHLRQALEKKEFAVYYQPQVDLGTGQIVGAEALMRWNSPELGL 1079 Query: 453 IPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFT 511 + P FI AEE G I +G W++ V Q W D G L +AVN+SA Q A++ I Sbjct: 1080 VTPDRFIPLAEEIGCICSMGTWILRQVCEQGKAWLDAGYPPLTLAVNLSAVQFAEEDIAC 1139 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 LK+ LQE + +++E+TES L+ ++ + +++ ++LG ++ LDDFGTGYSSL+ Sbjct: 1140 RLKETLQETGYPAEYLELEVTESTLMHKEQQTIDLLKSLNELGVRLALDDFGTGYSSLAY 1199 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L FP+ +K+D+ F+ D+ +V AIV + L ++AEGVE+ + L + Sbjct: 1200 LKYFPLHLLKVDKSFIDDLPADANDCKMVTAIVQMGHGLGFDLLAEGVETVAQRDCLAQL 1259 Query: 632 GINERQGFLFAKPMPAVAFERWYKRYLK 659 G + QG+ + P+PA F ++ K Sbjct: 1260 GCDYYQGYYCSPPVPACEFAA-LRQSQK 1286 Score = 52.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 21/218 (9%), Positives = 61/218 (27%), Gaps = 18/218 (8%) Query: 37 TTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAW 96 + R + L ++ I+++ + ++ + + ++ + ++ + Sbjct: 347 WQDTQRKIALQGHLSSEIKQLEEGFNHMLQVVDLQRDKIAEKVETLRLQTQRLESEVQTR 406 Query: 97 HDTPAVA----RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL--KEHD 150 + + I D + N+ Sbjct: 407 QQAQQQLHIASERHQETARLLQHICDNVPDLIWAKDIEHHYIFTNKSNCRTLLCVDSTDI 466 Query: 151 VIGQS-----VFKLFMSRREAAASR------RNNRVFFRSGNAYEVELWIPTCKGQRLFL 199 IG++ L + A + +++ R+ + + G + L Sbjct: 467 AIGKNHEFFSDKILKEFPEDPLAYQFSELCCQSDSEVLRTRQSMRFQEVGHVK-GTLICL 525 Query: 200 FRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 K G+ I + S IT E++ ++ L+ Sbjct: 526 DVYKAPFYGADGELIGTVGSARIITREKQLEQETMRLS 563 >UniRef50_Q2W4Z4 Predicted signal transduction protein containing a membrane domain n=4 Tax=Magnetospirillum RepID=Q2W4Z4_MAGSA Length = 831 Score = 858 bits (2219), Expect = 0.0, Method: Composition-based stats. Identities = 199/560 (35%), Positives = 304/560 (54%), Gaps = 5/560 (0%) Query: 99 TPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 A V S A A +I D +G I R N + + TG E +V+G + Sbjct: 261 RLTEKALADEETRLAAHVFSNALEATLITDPKGRILRINPMFTELTGYGEAEVVGGNPRI 320 Query: 159 LFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLIC 218 + + +A + FR G ++ E+W GQ + + + I Sbjct: 321 IRSNHHDADFYAEIWQAIFRDGR-WQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIG 379 Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDN 276 S DITE+ AQ + LA+ D +T LPNR QD ++ A+ HA + + +++LDLD Sbjct: 380 SFRDITEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDG 439 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMAS 335 FKKVND GH GD LL++V++ + C+ +AR GGDEF V+ S + +A Sbjct: 440 FKKVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVAD 499 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 +IL L P I +V+ S+GI+L P G+ +++HADTAMY AK G+G+F + Sbjct: 500 KILASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFY 559 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIP 454 + EM +R L L+T LR+A+E Q +HYQP+ V EALVRWQ P G+I Sbjct: 560 SAEMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMIS 619 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALK 514 P+DFI AEE LI + +V+ R+ +WRD+G ++ +AVN+S + + ++ Sbjct: 620 PVDFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQGYDICMAVNLSGVNFSRDDLPEQVR 679 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 QVL++ F +++E+TES +I+ + V+Q+ LG ++ +DDFGTGYSSLS L R Sbjct: 680 QVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLKR 739 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 P++ +K+D+ FVRDI + LV +I+ +A +L L+V+AEG+E + A L + Sbjct: 740 LPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQECD 799 Query: 635 ERQGFLFAKPMPAVAFERWY 654 E QG+L AKPMPA + Sbjct: 800 EIQGYLIAKPMPAEQAGIFL 819 >UniRef50_C5V280 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V280_9PROT Length = 725 Score = 858 bits (2217), Expect = 0.0, Method: Composition-based stats. Identities = 193/597 (32%), Positives = 304/597 (50%), Gaps = 13/597 (2%) Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 V L K+ + + S + R+ L + A I+I DS+G Sbjct: 119 RKKSEVELAEIKLAHSQVSTLNSELDEMLHKQRETEQELLISATAFE-AQDGIMITDSKG 177 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 I R N+ D TG + +GQ+ L R +A ++ + E+W Sbjct: 178 VILRVNQAFTDITGYSSEEAVGQTPRLLKSGRHDAD-FYAAMWQCIKNTGQWSGEIWDRR 236 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G+ + + + + S DIT + +++R+ LA D +T LPNR + Sbjct: 237 KNGEIYPKWLTITEVKSFDGSVVHYVSSQVDITARKASEDRIHNLAFYDPLTQLPNRRLL 296 Query: 252 QDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 D + H+++ D V ++++DLD FKK+ND GH GD LL+ V+ L+C+ Sbjct: 297 LDRLRHSVSFSLRDGRHVALMFIDLDKFKKINDTLGHDIGDLLLKQVAERTLTCVRTCDT 356 Query: 310 LARPGGDEFLVLASNTS------QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 +AR GGDEF+VL + + + + +I+ L + + E + S+GIAL Sbjct: 357 VARLGGDEFVVLLDGLAGNLHEAAAQAKQIGRKIIDTLNQSYDLAGHEYQSGASIGIALF 416 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 EH + +++ AD AMY AK+ GR F PEM + + L+ + + AL +Q Sbjct: 417 DEHCQTAEDLLKQADIAMYQAKKAGRNTLRFFDPEMQASILARVALEKDFKDALLQEQFY 476 Query: 424 IHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQV 483 I YQP I+ G V EALVRW+ RG++ P DFI AEE+GLIVPLG WV+ RQ+ Sbjct: 477 ICYQPVISREGRVAGAEALVRWRHSIRGIVSPADFIPLAEETGLIVPLGNWVLKTACRQL 536 Query: 484 AKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 + W RD +L +AVN+SARQL + T + +++E + +ELTES L+ + E Sbjct: 537 SDWSSRDDTRDLTIAVNVSARQLKQEDFVTTVMGLIEETGANPRRLKLELTESMLVSDAE 596 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 + + + G LDDFGTGYSSL+ L+R P+D +K+DQ FVR+I + + + Sbjct: 597 SIIVKMNLLKEAGITFALDDFGTGYSSLAYLSRLPLDQLKVDQSFVRNIETEDSAVVICA 656 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTK-NGINERQGFLFAKPMPAVAFERWYKRY 657 A + +A L L+V+AEGVE+ + FL+ + + QG+LF+KP+ FE + + Sbjct: 657 ATINLAHNLKLKVVAEGVENEAQRYFLSSVHQCDFLQGYLFSKPVAIDEFECFIRNN 713 >UniRef50_Q1JY96 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY96_DESAC Length = 904 Score = 858 bits (2217), Expect = 0.0, Method: Composition-based stats. Identities = 185/604 (30%), Positives = 316/604 (52%), Gaps = 7/604 (1%) Query: 55 REMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAE 114 R +T + + ++ +T + + E+ + D ++ L + Sbjct: 299 RYLTQRSLNTVLQMTEAAFRNTEPARYKPTLVSEFNILGHSIVDLDHQRKESEKQLLLSS 358 Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 V A IVI + G I++ N CE +G + ++IG++ +A ++ + Sbjct: 359 SVFDNAVEGIVITNLDGIIEQVNPACEAMSGYRLKELIGENPRIFRSDHHNSAFYQQMWQ 418 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 G +E E+W G+ L + + S + DI+E +R++E+L+ Sbjct: 419 SLIEEGR-WEGEVWNRRKNGEVYPLNVSISRCTNSAGIPSHYVAIFHDISEIKRSEEKLQ 477 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQL 292 A D++T LPNR D + A+ HA +K + V+YLD+DNFK +ND+ GH +GD+L Sbjct: 478 HQAYHDALTNLPNRKLFHDRLSVAVAHARQHKTKLAVIYLDIDNFKYINDSLGHHYGDKL 537 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM-ASRILTRLRLPFRIGLIE 351 L+ +S +LSC + AR GGDEF++L + RIL +L LP + + Sbjct: 538 LQQISERLLSCTRQEDTTARLGGDEFIILMPEIEDPHDITVLCRRILKQLELPHALSGRD 597 Query: 352 VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDT 411 + S+G+ + P+ +I++AD AMY AKE G+ + +FT M Q + + + L+ Sbjct: 598 YTVNVSMGVTVFPDDADTPEDLIKNADIAMYRAKEAGKNGYQLFTAAMQQTIMQRIELEA 657 Query: 412 NLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 L AL ++ V+ YQP++ V EAL+RWQ P+ L+ P +FI AEE GLI Sbjct: 658 RLSDALCRNEFVLFYQPQVDLESEHVIGAEALIRWQKPDGQLVYPDEFIPIAEECGLITQ 717 Query: 471 LGRWVILDVVRQVAKWRDK-GINLRVAVNISARQL-ADQTIFTALKQVLQELNFEYCPID 528 + WV+ RQ KWR++ G N +++VN+S+ Q DQ + +K VL + + Sbjct: 718 IDHWVLKAACRQANKWREQSGRNFKMSVNLSSEQFAKDQELVQRVKNVLNKTGLPAECLT 777 Query: 529 VELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVR 588 +E+TE+ ++ + E A++++ Q + LG + +DDFGTGYSSLS + FP +K+D+ FV+ Sbjct: 778 LEVTENAVMSDTESAIAIMTQLTALGVSIAIDDFGTGYSSLSYVKNFPARYLKIDRSFVK 837 Query: 589 DIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAV 648 DI ++ +I+++ + LN++VIAEGVE + FL ++ + QG+ + KP A Sbjct: 838 DIPGDSDDMAIAASIISLGRNLNMEVIAEGVEEQTQIDFLKQHRCQQVQGYFYGKPCAAE 897 Query: 649 AFER 652 F + Sbjct: 898 FFSQ 901 >UniRef50_C7LTY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTY3_DESBD Length = 1075 Score = 856 bits (2213), Expect = 0.0, Method: Composition-based stats. Identities = 198/660 (30%), Positives = 317/660 (48%), Gaps = 14/660 (2%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + + ++ L ++ T S + PD + + + Sbjct: 416 RRFIKVNRKFSDLMGYSAAELGT-------LSPRDLVHPDDWQASEEAMKSLVTKEQKEI 468 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKR-EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 + + + + E + A VA+ L A +V Sbjct: 469 TLEKRYVRKGGGVFWGLATISPLWDQGEHPESYLAVVRDITVAKKAEEKLLLAAKVFENT 528 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 IV+ ++ G I++ N TG + +G + L R A + Sbjct: 529 VEGIVVTNTEGTIEQVNPGFTVITGYSADEAVGSNPRILKSDRH-AQHFYQEMWTKLTQD 587 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD 240 + E+W G+ + + DITE +R Q+ L A D Sbjct: 588 GHWAGEIWNRRKDGESYPEWLTISAVKNEAGQTTNYVSIFHDITELKRQQDALEYQAQHD 647 Query: 241 SITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSL 298 ++TG+PNR + D + A+ + K+ +++ DLDNFK +ND GH GD+LL D+S Sbjct: 648 ALTGMPNRILLGDRLRMALAQLARSGGKLALLFFDLDNFKTINDGLGHGVGDELLVDLSR 707 Query: 299 AILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCS 357 + L LAR GGDEFL+L S A +A+R+L L+ PF G +E + + S Sbjct: 708 RLERLLRSGDTLARLGGDEFLILLPEIESVDAASHIATRMLDALKAPFHHGDVEYFVTAS 767 Query: 358 VGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKAL 417 +G+ ++P+ G+++ +I++AD AMY AK GR + FTPEM+ + ++ LRKA+ Sbjct: 768 IGLTIAPDDGNEAPKLIKNADMAMYRAKSMGRNNYQYFTPEMDVAAHRRISMEYKLRKAI 827 Query: 418 ENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVI 476 E + + YQP + G + EAL+RW+ E LI P +FI AEES LI+PLG WV+ Sbjct: 828 EAQEFELFYQPLVHIQSGHILGAEALIRWRC-EGKLISPAEFIPLAEESALILPLGDWVL 886 Query: 477 LDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 Q W+D G +L ++VNIS+RQ + + L++VL + + E+TES L Sbjct: 887 RTAAHQAKLWQDAGHDLTMSVNISSRQFSGADLAVTLREVLLDTELRPGRLYFEITESML 946 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 + + A + + + G LDDFGTGYSSLS L R PID +K+D+ F++DI S Sbjct: 947 MGDVSKAETTLLNLREAGGTFFLDDFGTGYSSLSYLKRLPIDGLKIDRSFIKDITDDSDS 1006 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 +++V AIV++A+ LNL+++AEGVE+ + L G QG+L ++P+PA FE R Sbjct: 1007 RAIVAAIVSMARTLNLRIVAEGVETQAQRGLLASMGPIVLQGYLASRPVPAQDFEALLSR 1066 >UniRef50_A1WEV3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WEV3_VEREI Length = 981 Score = 856 bits (2213), Expect = 0.0, Method: Composition-based stats. Identities = 211/656 (32%), Positives = 323/656 (49%), Gaps = 6/656 (0%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 Y + S + + ++ + TE L + + + +M+ Sbjct: 324 QDGRYCSVHSQRAELLMGPAEQLIGRNVTEVLPTLAALSVLDVLHEAQAQGWSVGRQIML 383 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 L RK + L QV ++ AIVI Sbjct: 384 DLPDLGPTWFELSAARKPQAAGAKPRIILLSRDITERKRSQEQLQLTAQVFDQSSEAIVI 443 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D+ I R NR TG +E + +GQSV L M+ + +E E Sbjct: 444 ADASHRIVRINRAFSRITGYQESEAVGQSVRLLTMAEAGPDCNADAVYARLARQERWEGE 503 Query: 187 LWIPTCKGQRLFLFRNKFVHSG--SGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 W G + + + I DI+ +R AQER++ LA+ D +T Sbjct: 504 SWGRRKDGSGYPQWLSVSSVRDGDANGPITHSITLFRDISLQREAQERIQRLAHFDPLTD 563 Query: 245 LPNRNAMQDLIDHAINH--ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR + + I A ++ +++LDLD+FK VND+ GH GD LL V+ + S Sbjct: 564 LPNRVLLAERTQRQIAQEQARGGQLALLFLDLDHFKNVNDSLGHRIGDILLVAVARRLQS 623 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 + ++R GGDEFL+L TS + +AS +LT + PF+I E+ T+ SVGIA+ Sbjct: 624 LIGPQDTVSRLGGDEFLLLLPATSAAHAAKVASALLTAVAQPFQIDPYELSTTLSVGIAM 683 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 P G + + AD AMY+AK+ GR ++ FT ++ R L ++ LR+ALE Q Sbjct: 684 CPADGESFDTLYQRADAAMYSAKQSGRNRYGFFTADLQARTARALQIENALRRALERQQF 743 Query: 423 VIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 +HYQP+++ G+V EAL+RW PE G++ P +FI AE SG IV LG WV+ R Sbjct: 744 ELHYQPQVSLGTGQVVGAEALLRWHHPELGVVAPAEFIPVAENSGQIVALGEWVLHTAAR 803 Query: 482 QVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 +W D + LR V+VN+SA Q + + + LQ+ +++ELTE +++ Sbjct: 804 DAKRWLDMQLPLRAVSVNLSAVQFRHPQLPEMVTRCLQQAGLPARRLELELTEGAAVDDP 863 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 AL+++ Q G ++ +DDFGTGYSSLS L RF I +K+DQ FVRD+ +++V Sbjct: 864 VAALAMMDQLHDRGVRLSMDDFGTGYSSLSCLKRFQIYKLKIDQSFVRDLDDDANDRAIV 923 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 AI+ +AQAL +Q AEGVE+ + FL G +E QG+LF++P+PA AFE + + Sbjct: 924 SAIIRMAQALGMQTTAEGVETDGQLQFLRAQGCDEGQGYLFSRPLPADAFEAYLRA 979 Score = 59.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 48/146 (32%), Gaps = 6/146 (4%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF-NRLCEDYTGLKE 148 G A + + L + + +D G ++ E G Sbjct: 288 RGLADQVAQRISEIQATQQQLR---ATIDAIPDPLFEIDQDGRYCSVHSQRAELLMG-PA 343 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 +IG++V ++ + A + G + ++ + + + Sbjct: 344 EQLIGRNVTEVLPTL-AALSVLDVLHEAQAQGWSVGRQIMLDLPDLGPTWFELSAARKPQ 402 Query: 209 SGKNEIFLICSGTDITEERRAQERLR 234 + + +I DITE +R+QE+L+ Sbjct: 403 AAGAKPRIILLSRDITERKRSQEQLQ 428 >UniRef50_A0L9S8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9S8_MAGSM Length = 971 Score = 855 bits (2211), Expect = 0.0, Method: Composition-based stats. Identities = 197/647 (30%), Positives = 325/647 (50%), Gaps = 10/647 (1%) Query: 20 YWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDE-SDLSVH 78 Y L L P+ Q+ A AA + + L +E Sbjct: 321 YRILQSGLKSLVLKP--LVNPEDLPQMEALLAAGGDASRWVKLEFRLCLGSEEPRWFECC 378 Query: 79 LVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNR 138 ++ K + E HD R H L A+ + + A++I I+ N Sbjct: 379 VLPIKDDHAEVVQYHGVLHD-ITERRKGEHDLRLAQVLFRTTNEALMISSRDNKIEMVNP 437 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF 198 TG + +V+G+ L R +A + A+E E+W G+ Sbjct: 438 AFSRITGYQLDEVLGKGPDLLQSGRHDAP-FYTQMWHALQQDGAWEGEIWNRRKSGETYP 496 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 + + + + + + +DIT+ ++A+E + AN D +T LPNRN D + Sbjct: 497 EWLSIATVTNDKGETVQYVAAFSDITKRKQAEETILHQANYDFLTDLPNRNLFHDRLQTE 556 Query: 259 INHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGD 316 + + +V ++++DLD FK VND GH GDQLLR+V++ + C+ +AR GGD Sbjct: 557 LKRSQRSGQQVALLFIDLDRFKFVNDTLGHNVGDQLLREVAIRLGHCVRESDTIARLGGD 616 Query: 317 EFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIR 375 EF V+ + +A ++ +L + I E++ S S+GI + PE + +++ Sbjct: 617 EFTVILPELHGPEGVARLAQGMIDKLEERYCIQDHELFISASIGITIYPEDADNMMDLVK 676 Query: 376 HADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRG 434 +AD AMY AKE GRG FC +T EMN + ++ LR ALE Q IHYQP + G Sbjct: 677 NADVAMYRAKENGRGSFCFYTAEMNADARQLHKIEQALRVALEEGQFWIHYQPYVQQSSG 736 Query: 435 EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-L 493 + +EAL+RW++ ++ P FI AEE+GLIVP+G WV+ V+ +A+W+ +G + Sbjct: 737 LITGVEALIRWRNSAGEIVYPDQFIPVAEETGLIVPIGLWVLRSVIGVIAQWQREGHPDI 796 Query: 494 RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQL 553 +VN+SARQ + + +K LQE + +E+TES +I + E L+++++ L Sbjct: 797 TFSVNVSARQFQEGHLVGQIKAALQENQINPQSLMLEITESLMIRDPEHTLNMLKEIKAL 856 Query: 554 GAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQ 613 G +V LDDFGTGYSSL L +FPID +K+D+ F+ I +++V AIV++A +L + Sbjct: 857 GVRVALDDFGTGYSSLGYLKQFPIDLLKIDRSFINGIANSQDDETMVSAIVSMAHSLGVG 916 Query: 614 VIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 VI EG+E+ ++ + + + QGF +++PMP +++ Y K Sbjct: 917 VIGEGIENDQQLQRVNLHACDYVQGFFYSRPMPYDELALFFEGYQKS 963 Score = 57.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 22/192 (11%), Positives = 57/192 (29%), Gaps = 16/192 (8%) Query: 53 RIREMTVITSSLMMSLT-VDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLS 111 R + + L + L +D S+L ++ + ++A N + + + Sbjct: 230 RQAMLRLANGDLDVPLEDMDRSELGDLSQALRVFRDQFAINEGLRLEREESLKQAAEKRE 289 Query: 112 FAEQVVSEAHSAIVIL--DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 +++ +H+ ++ D ++ + C + L + Sbjct: 290 ELARIIEISHTVVLSWENDEEWSLSYVSENCYRILQ--------SGLKSLVLKPLVNPED 341 Query: 170 RRNNRVFFRSGN---AY-EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 +G + ++E + + + + DITE Sbjct: 342 LPQMEALLAAGGDASRWVKLEFRLCLGSEEPRWFECCVLPIKDDHAEVVQYHGVLHDITE 401 Query: 226 ERRAQERLRILA 237 R+ + L LA Sbjct: 402 RRKGEHDL-RLA 412 >UniRef50_B3E661 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=B3E661_GEOLS Length = 1027 Score = 854 bits (2209), Expect = 0.0, Method: Composition-based stats. Identities = 185/661 (27%), Positives = 312/661 (47%), Gaps = 13/661 (1%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAAR-------IREMTVI 60 + L + L + A R V+ Sbjct: 363 NRAIEKMSGVPKEEMLGKGDHEYSIPFYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVL 422 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSE 119 + D V G + A + + L + Sbjct: 423 DAETFCPALHDGKGAYVWATGVPLYNAAGERIGAIEAIRDISDRKQSELFLKKLTHGIEN 482 Query: 120 AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRS 179 + SA+VI D++G I+ N+ TG + +G++ L + S Sbjct: 483 SASAVVITDTQGVIEYVNKKFIQLTGFSLEEAVGKNPRILKSEATPPEVFVDLWKTIL-S 541 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANT 239 G + EL G+ + + I + DI E + A+ + LA Sbjct: 542 GREWRGELLNRRKNGEVYWSITSISPLRNDSGEITHFIANVEDINERKNAEATIEHLAYF 601 Query: 240 DSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVS 297 D +T LPNR +QD ++ A+ + + V ++YLDLD+FK VND+ GH GD LL++++ Sbjct: 602 DPLTDLPNRRMLQDRLELALRRSRRHGSNVALMYLDLDSFKHVNDSMGHPAGDLLLKEMA 661 Query: 298 LAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSC 356 + D V+ R GGDEF ++ + + +A +++ + P + EV + Sbjct: 662 GRFSGVVRDDDVVCRLGGDEFALILHDIHQDQDVVPIAQKLIEAVAQPVPLDGREVVVTA 721 Query: 357 SVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKA 416 S+GIAL P G D + +HAD A+Y AKE G+ F + E+N + + L+ LR A Sbjct: 722 SIGIALFPRDGGDVKNLEKHADIALYHAKEEGKNTFRFYLEELNSTISTRIALEQGLRYA 781 Query: 417 LENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWV 475 E +L +HYQPK+ G+V +EAL+RW SP+ GL+ P+ FI AE++ LI+P+G WV Sbjct: 782 KERQELELHYQPKVCVASGKVSGVEALLRWHSPDFGLVSPIRFIPLAEQTRLIIPIGEWV 841 Query: 476 ILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESC 535 + Q +WR++G+ L +AVN+SA QL + + ++ E + +++ELTES Sbjct: 842 LRTACLQQVQWREQGLLLNMAVNLSAIQLKSPGLVERVAAIIDETGIQPEHLELELTESA 901 Query: 536 LIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPV 595 L+ N + + ++++ LG + +DDFGTGYSSLS L FP+ +K+D+ FVRD+ Sbjct: 902 LVNNPDEVVQLLERLRTLGCSISIDDFGTGYSSLSYLKSFPVTILKIDRSFVRDLAHNSG 961 Query: 596 SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +++ R++V +A L+++ +AEGVES ++ L + G QGF++++P+ A + Sbjct: 962 DRAIARSVVDLANNLDMKTVAEGVESEEQLTILQQIGCTYIQGFIYSRPVQADQVSAVVR 1021 Query: 656 R 656 R Sbjct: 1022 R 1022 Score = 66.8 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 20/161 (12%) Query: 97 HDTPAVARDLSHGL----SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 + A AR + L ++ A+ ++D + +NR E +G+ + +++ Sbjct: 319 REQLAKARAVEQALLDARQQLNDIIDFFPDAVFVIDRNKRVTIWNRAIEKMSGVPKEEML 378 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRL--------------- 197 G+ + + + + + G+ L Sbjct: 379 GKGDHE-YSIPFYGQRRTQLLDLLDLDDAELAAKYSNIRRVGEVLDAETFCPALHDGKGA 437 Query: 198 FLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 +++ + I I + DI++ ++++ L+ L + Sbjct: 438 YVWATGVPLYNAAGERIGAIEAIRDISDRKQSELFLKKLTH 478 >UniRef50_D1U882 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U882_9DELT Length = 958 Score = 854 bits (2207), Expect = 0.0, Method: Composition-based stats. Identities = 171/588 (29%), Positives = 295/588 (50%), Gaps = 6/588 (1%) Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 ++ + L E+V A I I D G Sbjct: 361 RGEMGSLSMHFNRYMDRLVDFRDELRAEIDERTRAEQRLRLYEKVFENALEGISITDKSG 420 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 + N TG +VIG++ L ++ ++ E+W Sbjct: 421 VMVAVNPAFTTITGFTSEEVIGKNPRVLKSDMH-GEEFYGEMWTTLKARGSWHGEIWNRR 479 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G+ + + DI++ + +E+L D +TGLPNR + Sbjct: 480 KNGESYPEILSISSIRDDDGEIANYVAVFHDISDMKHKEEQLAHHLYHDGLTGLPNRVLV 539 Query: 252 QDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 D + A++HA+ KV V++LDLDNFKK+ND++GH GD LL+ V+ +++ + Sbjct: 540 LDRLSMALSHANRTGTKVAVLFLDLDNFKKINDSFGHAQGDTLLKAVAERLVALYRDEDT 599 Query: 310 LARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGS 368 +AR GGDEFLV+ + + + +A + PF I EV+ + S+G+ L P+ G Sbjct: 600 VARQGGDEFLVVVVDVHEEREVVDLAEGLQRVFEEPFVIKGQEVFITPSIGVTLYPDDGQ 659 Query: 369 DSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQP 428 D +++++AD AMY +K GR + +FT +M++R+ + L L++++R+AL+ + +++QP Sbjct: 660 DPASLVKNADMAMYQSKAKGRNSYFLFTQQMSERIAQRLTLESDMRRALKEREFTVYFQP 719 Query: 429 KITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR 487 K+ GEV LEALVRW P+ ++ P DFI AEE+GLIVPLG +V+ + + + Sbjct: 720 KVDLASGEVSGLEALVRWVKPDGIIVSPEDFIPMAEETGLIVPLGEFVLDASCKAMQVLQ 779 Query: 488 DKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSV 546 G + L VAVN+S Q + + + L+ +++E+TES L+ + + +++ Sbjct: 780 GVGCSALTVAVNLSPIQFGQEDLVEMVVANLERNGLPASRLELEITESTLMTDVQSSVAQ 839 Query: 547 IQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAV 606 + + +LG + +DDFGTGYSSL L FPI +K+D+ F+RDI +V +V + Sbjct: 840 LNRLVELGITISIDDFGTGYSSLYYLKNFPISTLKIDRSFIRDITIDDSDAKIVETVVLM 899 Query: 607 AQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 A+ + + V+AEGVE+ ++ L G QG+ +++P+P + Sbjct: 900 ARTMGIGVVAEGVETKEQLDLLATFGCATVQGYYYSRPLPLEKIIEFL 947 >UniRef50_Q3A1G1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1G1_PELCD Length = 1061 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 194/679 (28%), Positives = 337/679 (49%), Gaps = 41/679 (6%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMS 67 + ++ + + + + + + A R + + + Sbjct: 395 NRGAEKMLGYSAEEMVGRETPTVF-----HLASELQTRYTELGADRGTPIKDFADYMAHA 449 Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWH-------------DTPAVARDLSHGLSFAE 114 T D ++ + +A + + L Sbjct: 450 TTADAEHREWTYTSKQGEHISVSLVITAMRSPAHGIVGYLGIAQDITERKRQENTLRKLS 509 Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 QVV ++ +A+++ D +GNI+ N TG +V G++ L S +A R+ Sbjct: 510 QVVEQSPTAVILTDPQGNIEYANPKFTQITGYSLTEVHGKNPR-LLKSGETSAEEYRDLW 568 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 +G + E G + + + + DIT+ +R +E+L+ Sbjct: 569 TTITAGREWHGEFHNKRKDGSLFWEHASISPVRNDAGDISHFLAIKEDITDRKRYEEQLQ 628 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHADNNK----------VGVVYLDLDNFKKVNDAY 284 LA D++TGL NR +QD ++ +I A + FK +ND+ Sbjct: 629 HLATHDNLTGLANRALLQDRLEQSILFAKRSGRLVAALLLDLD--------RFKIINDSL 680 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRL 343 GH FGD+LL+ + + + +AR GGDEF++L + ++ + +A +IL R+ Sbjct: 681 GHSFGDRLLQIAADRLRESVRGADTVARLGGDEFVILLAEVANEEDVGKVAKKILDRITA 740 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 PF+I E+ + S+GI++ P+ G D +IR+AD AMY AKE G F ++ PEMN V Sbjct: 741 PFQIADREITVTASLGISIYPQDGEDEETLIRNADIAMYQAKEEG-NAFRLYAPEMNIVV 799 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYA 462 E + ++T+LR+AL+ +L++HYQPKI G++ EALVRWQ P RG+I P FI A Sbjct: 800 HEAMEMETDLRRALDRGELLLHYQPKIDLDSGKITGAEALVRWQHPVRGMIAPGMFIPLA 859 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELN 521 EE+GLI+P+G WV+ ++ Q+ W+ +G L +A N+SARQ + + ++++LQ+ Sbjct: 860 EETGLILPIGEWVLENICLQIKSWQTQGFPLVPIAANLSARQFRNDELIATIQRILQDTG 919 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 +++ELTES ++ N + A +Q+ + LG + LDDFGTGYSSL+ L RFP+D +K Sbjct: 920 LPPHLLELELTESMIMRNVQTAAETMQELNALGVSLALDDFGTGYSSLNYLRRFPVDCLK 979 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ F+ D+ P + ++ +I+A+A +L LQ +AEGVE+ ++ FL + + QG+L+ Sbjct: 980 IDRSFISDVADDPSAAAVATSIIAIAHSLGLQAVAEGVETEEQLEFLRQCACDSYQGYLY 1039 Query: 642 AKPMPAVAFERWYKRYLKR 660 + P+ F ++ R Sbjct: 1040 SAPLAVEEFTAMLRQESTR 1058 Score = 91.9 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 68/210 (32%), Gaps = 18/210 (8%) Query: 46 LSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASA---WHDTPAV 102 + + + M S + +E + + + + + Sbjct: 300 VERDTHGQPLRMLGTFSDITERRQSEEQTRKAEREKADLLEEAQQARLTLQRLFEEQTLA 359 Query: 103 ARDLSHGLSFAEQVVSEAHS-AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ---SVFK 158 + ++ +V++ A +I+ D RG I FNR E G +++G+ +VF Sbjct: 360 SAEIERTSRLLAEVLNAASEVSIIATDPRGIITVFNRGAEKMLGYSAEEMVGRETPTVFH 419 Query: 159 LFMSRREAAASRRNNR-----------VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 L + +R + +A E + +G+ + + Sbjct: 420 LASELQTRYTELGADRGTPIKDFADYMAHATTADAEHREWTYTSKQGEHISVSLVITAMR 479 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILA 237 + + DITE +R + LR L+ Sbjct: 480 SPAHGIVGYLGIAQDITERKRQENTLRKLS 509 >UniRef50_A6T1A8 Sensory box/GGDEF family protein n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T1A8_JANMA Length = 910 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 204/596 (34%), Positives = 308/596 (51%), Gaps = 16/596 (2%) Query: 69 TVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD 128 D ++++ + + E H + L E+ + + +A++I Sbjct: 311 AFDAQEVALLVSLAQRVTVEIRA-----HRDRHGRQAAEAALRLRERAIECSANAVIISS 365 Query: 129 S---RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 + I+ N E TG + IG+S L + E A R + Sbjct: 366 AQVPEFAIEYVNPAFERITGYTAAEAIGRSSSFLLRNDHEQAGLYE-IRAALAEKREGKA 424 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 L G + + + +DIT ++ + L LA+ D +TGL Sbjct: 425 VLRNYRKNGSLFWNDLYIAPVKDDEGKTTHFVAAMSDITPMKQYETTLHRLASHDVLTGL 484 Query: 246 PNRNAMQDLIDHAINHADNNKVGV--VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR +QD +++AI ++ N V V +DLD FK VND GH GD LL+ +S + + Sbjct: 485 PNRALLQDRLENAIAYSARNGHAVWVVLVDLDRFKFVNDTMGHQAGDVLLKIISDRLQAS 544 Query: 304 LEHDQVLARPGGDEFLVLASNTSQSAL---EAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 + +AR GGDEF+++ + RI+ + P I E + SCS+GI Sbjct: 545 VRESDTVARLGGDEFVLVLPECGDGPSGYSSDVIQRIMEAVVKPLTIQGSEFFLSCSMGI 604 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 A+ P G+D T ++ HAD AMY +KE GR F +TP MN + E L ++ LR A+E + Sbjct: 605 AVYPNDGADPTTLLAHADVAMYRSKELGRNNFQFYTPAMNDQALERLRIEGELRHAIELN 664 Query: 421 QLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 +LV+HYQP++ G + LEALVRW P G++ P FIS AEE+GLI+P+G WV+ Sbjct: 665 ELVLHYQPQVDLHTGAIVGLEALVRWNHPILGMVQPGSFISLAEETGLIIPIGAWVLQTA 724 Query: 480 VRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 RQ W+D G LR+AVN+SARQ ++ ++K LQE E +++ELTES ++ Sbjct: 725 CRQAKAWQDMGFTQLRIAVNLSARQFTQASLLESIKDTLQETGLEARFLEIELTESSVMA 784 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 + E + ++ LG Q+ +DDFGTG+SSL+ L RFPID +K+D+ FVRDI S Sbjct: 785 DIERNILTLRDLKSLGVQLSVDDFGTGHSSLAYLKRFPIDTLKIDRSFVRDIAINQDDAS 844 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 +V +I+++A L L VIAEGVE+A + L G NE QG+ F KP+P+ E Sbjct: 845 IVSSIISLAHNLKLNVIAEGVETASQMDILRAQGCNEIQGYYFCKPLPSDQIETLL 900 >UniRef50_Q2W154 Putative uncharacterized protein n=2 Tax=Magnetospirillum RepID=Q2W154_MAGSA Length = 802 Score = 853 bits (2205), Expect = 0.0, Method: Composition-based stats. Identities = 200/591 (33%), Positives = 323/591 (54%), Gaps = 9/591 (1%) Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 D+ +HLV + +R+ + + + L E + +A +++I DS G I Sbjct: 214 DVHMHLVADSVGQRD---RVAIFSRDVTQSHQRRQQLRKLETALEQAPVSVMITDSHGAI 270 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 + NR +G E +V+G++ L S A+ R+ SG ++ EL Sbjct: 271 EYVNRAFVLVSGYSEDEVLGRNPR-LLKSGETVASLYRDMWHCLASGATWQGELCNRAKD 329 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G + + + +IT+ + +++L A D++TGLPNR ++D Sbjct: 330 GSLFWEYATISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTLTGLPNRLLLED 389 Query: 254 LIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 + HAI A ++G+++LDLD FK VND+ GH+ GD+LL+ VS + L +A Sbjct: 390 RVHHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVA 449 Query: 312 RPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDS 370 R GGDEF+V+ ++ S + L +A +I L P + +V+ S+GIA+ P+ G + Sbjct: 450 RLGGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIGIAIYPDDGDNF 509 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 A+++ ADTAMY AK+ GR FC + MN + L L+ LR+AL + + YQP++ Sbjct: 510 NALMKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVRGEFQLFYQPQV 569 Query: 431 TW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 G +EAL+RW SPERG + P FI AEES LI +G WV+ + RQ+A WR+ Sbjct: 570 DLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEESCRQIAAWREA 629 Query: 490 GIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQ 548 G+ ++VAVN+S RQ + + + ++ + +++ELTES ++ + A+ + Sbjct: 630 GLTGIKVAVNVSGRQFLNHALVECISDLMAQYAVLPSQLEIELTESTVMAEPDRAIEQLT 689 Query: 549 QFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQ 608 + ++G QV +DDFGTGYSSLS L R P+ IK+D+ FVRD++ Q + ++V AI+ +A Sbjct: 690 RLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDNAAIVSAILGLAD 749 Query: 609 ALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 AL++ ++AEGVE+ E+ L G + QGF +AKPMPA W R + Sbjct: 750 ALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAAWMLRQGR 800 Score = 75.3 bits (185), Expect = 7e-12, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 72/235 (30%), Gaps = 23/235 (9%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQA-ARIREMTVITSSLM 65 + + P + S+ + E R L+ + E A A ++ V SS Sbjct: 34 VNRRFCQITGMTPEQCIGHSARRHFADDDQRLEVVRQLKEAGEIADADVKFFRVDGSSFW 93 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLS----FAEQVVSEAH 121 LT+ + L+ V AW + + + ++ + Sbjct: 94 SVLTIRSATLNGEAV------------NLAWLYDVSKRKQAEQAILDGKTLIRAMLDSST 141 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 IV++++ G I N D+ G++++ A RR Sbjct: 142 DGIVLVNAEGTILAVNAAASAIFEKNSDDLPGKAIWDHLPDSVVAP-MRRGIDRVLDRRE 200 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 E I + + + S + D+T+ + +++LR L Sbjct: 201 TVESHHAIGAK---LFDVHMHL--VADSVGQRDRVAIFSRDVTQSHQRRQQLRKL 250 Score = 65.7 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 40/119 (33%), Gaps = 6/119 (5%) Query: 116 VVSEAHSAIVILDS-RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 ++ E+ + + G + NR TG+ IG S + F + R Sbjct: 13 ILDESPVGVSVSRRRDGLVLFVNRRFCQITGMTPEQCIGHSARRHFA---DDDQRLEVVR 69 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 +G + ++ G + + + L D+++ ++A++ + Sbjct: 70 QLKEAGEIADADVKFFRVDGSSFWSVLTIRSAT-LNGEAVNLAWLY-DVSKRKQAEQAI 126 >UniRef50_C4L987 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L987_TOLAT Length = 1098 Score = 853 bits (2204), Expect = 0.0, Method: Composition-based stats. Identities = 205/637 (32%), Positives = 324/637 (50%), Gaps = 16/637 (2%) Query: 32 FSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVH-----LVGRKINK 86 + ++ P+ ++ AE I T L V RK Sbjct: 448 LTMSDLLHPEDLQRVWAEVIHHIETRHKEYILECRVRTAAGEYLWVENHVTTSFDRKGKP 507 Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 + + G + ++ L A V IVI D+ NI + NR D G Sbjct: 508 QRFTGVMTDITQ----QKNNELQLRQAAIVFESTREGIVITDAERNIIKVNRALIDLFGY 563 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 E++++GQ + + ++ + + E+W G+ L + + Sbjct: 564 PENELLGQRPRIFHSGKHDGHFYQQMLQA-LDEHGFWRGEMWNRRQNGELLPMMTSINPV 622 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DN 264 S ++ I TDI++ + ++ RL +A D +TGLPNR + +D A+ HA ++ Sbjct: 623 CDSNGEILYYISIYTDISQLKDSEARLEHMALHDPLTGLPNRAMLGQKLDSALQHAMLNS 682 Query: 265 NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA-S 323 +V ++ LDLD+FK VND++GH FGD+LL VS + L V+ R GGDEF VL + Sbjct: 683 TRVALLMLDLDHFKNVNDSFGHHFGDELLHQVSARLKQQLRESDVVCRLGGDEFTVLLQN 742 Query: 324 NTSQSALEAMASRILTRLRLPFRIGL-IEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 N S + +A RI+ L PF + EV S+GI+L PEHGS + +++ ADTAMY Sbjct: 743 NPSPDDVSLLAERIIHALHQPFLLSNAREVMIGTSIGISLYPEHGSTAEELMQQADTAMY 802 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEA 441 AK GR + F+ E+ + L L+ L +A+ + + YQP+I+ ++ EA Sbjct: 803 RAKHDGRDGYRYFSEELFLKAKARLELEQRLHRAITGQEFKVFYQPQISIKTNQIIGAEA 862 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNIS 500 L+RW PE GLIPP +FIS AEE+GLI +G WV+ + RQ W D+ + + +AVN+S Sbjct: 863 LLRWDDPEYGLIPPSEFISVAEETGLIQNIGEWVLYETCRQGRDWLDQHLPPINLAVNLS 922 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 QL + + +L F +++ELTES L+E E + ++Q Q G ++ +D Sbjct: 923 PLQLHHGDVRQLIGTILHNSGFPAHHLELELTESALMEQQEETVKILQGLRQQGIRIAID 982 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFGTGYSSL+ L +FP+D +K+D+ FV DI + + IVA+ +L L V+AEGVE Sbjct: 983 DFGTGYSSLAYLKQFPLDVLKIDKRFVEDIPHERDDMEIAATIVAMGHSLRLTVLAEGVE 1042 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 + + FL + G + QG+L++ P+PA F + + Sbjct: 1043 TKAQLEFLEQQGCDYYQGYLYSMPLPAEEFAQLLSQQ 1079 Score = 67.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 51/178 (28%), Gaps = 12/178 (6%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL-DSRGNIQRFNRLCEDYTGLKEHD 150 A++R ++ + I ++ G+ RFN L + Sbjct: 73 RQHYMQHRQALSRRVAEKDRLLHHFFDLPLLGMAITTNANGSWLRFNDHLSTLFNLSRDE 132 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 + ++ L + R+ Y E G LF + Sbjct: 133 LAELNLLALTHPDDRPYDRQEWMRMQDGESQGYRREKRFVRPDGSMLFALVDTRCIRHPD 192 Query: 211 KNEIFLICSGTDITEERRAQERLRILAN-TDSITGLPNRNAMQDLIDHAINHADNNKV 267 + +I DI+ + ++ RL N D + L N AI + + V Sbjct: 193 GSIDCMINVIEDISARKNSELRLIRQNNLYDML-SLTN---------QAIVRSQDRLV 240 >UniRef50_C4L9X9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L9X9_TOLAT Length = 1101 Score = 853 bits (2204), Expect = 0.0, Method: Composition-based stats. Identities = 193/662 (29%), Positives = 327/662 (49%), Gaps = 13/662 (1%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + L ++ + L + + + Q++ + + Sbjct: 445 RFNHQLSDLLGYSHSEMAEHTLLSLTANEYQEADIAAMYQMTQDLCDGYLCEKQLRRKDG 504 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + V+ V R I + + + ++ L + V I+ Sbjct: 505 QLIYVNVDTRCVRTADRNI------AFIISVIEDISSQKENEAILRQSATVFDNTREGIM 558 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I D I R N + G +H++ G++ +F S + ++ R + + Sbjct: 559 ITDKNAQIIRVNPAFAELFGFSQHELQGKTP-VIFKSGKHTHEFYQHIRDSLNTSAFWRG 617 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+W + L + + + +DI++ + ++ +L LA+ D +T L Sbjct: 618 EIWNRRKDNHIIPLICSISAVRNDKQQLTHYVSVYSDISKLKASEAKLAHLAHHDPLTQL 677 Query: 246 PNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR + + HAI+ A +++ ++ LDLD FK VND++GH GD LL++V+ + Sbjct: 678 PNRTLLTINLSHAIDLAVRNHHRIALLMLDLDRFKDVNDSFGHQIGDALLQEVARRLRRR 737 Query: 304 LEHDQVLARPGGDEFLVLAS-NTSQSALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIA 361 + + R GGDEF VL N + +E A IL L+ PF + EV S+GI+ Sbjct: 738 VRISDTICRLGGDEFTVLIEGNPALHDVEHFAEDILQLLKDPFSLPNGREVIIGASIGIS 797 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 L PEHG +++ AD AMY AK GR F F+ E+ + + L L+ L++AL ++ Sbjct: 798 LYPEHGQTPKELLQQADAAMYRAKAHGRSCFRYFSDELTRAAEQRLDLEVRLQRALRLNE 857 Query: 422 LVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 L +++QP+I + EALVRWQ P GLI P FI AEE+GLI LG WV+L+ Sbjct: 858 LCLYFQPQIDISSNRIIGAEALVRWQDPAHGLISPAQFIPVAEETGLIKQLGEWVLLEAC 917 Query: 481 RQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 RQ +W+ KG+ + +AVNIS Q + I ++ L++ + +++ELTES L+ + Sbjct: 918 RQGKEWQQKGLPAINLAVNISPVQFRNSNILESVFNALKQTGYPASLLELELTESALMTH 977 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 + A+ ++ + G ++ +DDFGTGYSSL+ L RFP+D +K+D+ FV DI + + Sbjct: 978 ENEAVEILSALRKYGIRLAIDDFGTGYSSLAYLKRFPLDVLKIDKSFVDDIPHKKDDMEI 1037 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 AIVA+A L L+V+AEGVE+ ++ FL + G + QG+L + P+PA FE+ + + Sbjct: 1038 AAAIVAMAHTLRLKVLAEGVETEEQLTFLKEQGCDCYQGYLMSPPVPADQFEQLLRAQAE 1097 Query: 660 RA 661 + Sbjct: 1098 DS 1099 Score = 78.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 2/151 (1%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR-GNIQRFNRLCEDYTGLKEHD 150 + + + R S + + I + G+ RFN D G + Sbjct: 401 RQQQYTNQLELQRQTSEKDRLLKHFFELPLFGMAITHGQTGHWIRFNHQLSDLLGYSHSE 460 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 + ++ L + + A ++ + Y E + GQ +++ + + Sbjct: 461 MAEHTLLSLTANEYQEADIAAMYQMTQDLCDGYLCEKQLRRKDGQLIYVNVDTRCVRTAD 520 Query: 211 KNEIFLICSGTDITEERRAQERLRILAN-TD 240 +N F+I DI+ ++ + LR A D Sbjct: 521 RNIAFIISVIEDISSQKENEAILRQSATVFD 551 >UniRef50_A1ALY4 Diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALY4_PELPD Length = 1238 Score = 852 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 191/624 (30%), Positives = 324/624 (51%), Gaps = 11/624 (1%) Query: 37 TTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAW 96 PD+ ++ + R + + E L + + Sbjct: 610 HFPPDQREKIRSMVQGGFRRGAAEAEVSLQGSSSREIYLLTSRLFLLGGEDCLITVGIDI 669 Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 + R L +V +I+I D+ I N+ TG + ++IGQS Sbjct: 670 ----SARRRAEATLELWGRVFECTSESIMITDAAQRIVSVNQAFCATTGYRAEEIIGQSS 725 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 L + R+ R R +++ E W G+ + Sbjct: 726 LALRSDVHDGIYFRQLWRG-IRKRGSWQGEFWCRHKNGEVSPQWMVVNTVHDRQGTVTNY 784 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDL 274 I TDI+ ++ ++R++ +A+ D++T LPNR + + A+ A V V+++DL Sbjct: 785 IALFTDISAQKSQEQRIQHIAHHDALTNLPNRLLCMERLILALQQAHRNGRHVAVIFIDL 844 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA--LEA 332 D+FK +ND+ GH GD +L + + + ++R GGDEF+++ ++ S E Sbjct: 845 DHFKNINDSLGHHVGDCVLVTAANRLSMGVRDGDTVSRLGGDEFVIILADIEDSHQIEEI 904 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 M R+L +R P+ G E++ SCS+GI++ PE G D ++R+ADTAMY AKE GR + Sbjct: 905 MKHRLLPLMRQPYDAGGYELHCSCSIGISIFPEDGLDKDTLLRNADTAMYRAKEVGRNNY 964 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG 451 +T E+N R + L ++T+LRK +E ++L++HYQPK+ G+ LEAL+RWQ P+ G Sbjct: 965 HFYTEELNSRAMQRLSIETSLRKGIERNELLLHYQPKLDLHTGKPYGLEALLRWQHPDHG 1024 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIF 510 +I P++FI AEE+GLI+P+G+ VI + RQ+++W G+ ++ +++N+SA Q D+ Sbjct: 1025 MISPMEFIPIAEETGLIIPIGKQVIRNACRQLSRWSSVGMSHICLSLNVSAVQFRDRRFV 1084 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 L Q+++E I++ELTE+ L+E+ + V++ G +DDFGTGYSSL+ Sbjct: 1085 EDLVQLVREEGVSPHRIELELTETMLMEDAVRTIRVMETLKDEGFLFSIDDFGTGYSSLN 1144 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L RFPID +K+D+ F+R + ++P ++++AI+ + L++QVIAEGVE E L Sbjct: 1145 YLHRFPIDCLKIDRSFIRGMLERPADLAIIKAIIGLGHTLDMQVIAEGVEKEDEYRALRA 1204 Query: 631 NGINERQGFLFAKPMPAVAFERWY 654 G + QG+ A+P+ W Sbjct: 1205 AGCDGIQGYFVARPLTPEQVPEWL 1228 >UniRef50_Q2BQI6 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQI6_9GAMM Length = 955 Score = 852 bits (2202), Expect = 0.0, Method: Composition-based stats. Identities = 198/661 (29%), Positives = 326/661 (49%), Gaps = 12/661 (1%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 T+ + + + + S + EP + A ++ T Sbjct: 298 TMLYLSDRCEEIFGYTAESLIKSR----YCSYAQLIEPGYREYVWAAVQNSLKTQTPYKV 353 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 + + ES + GR ++ + + + + L+ A V Sbjct: 354 LYKLKHSSGESR-WMEEQGRGVSTDSTGLTIEGYIEDVTERIEAENRLNQAAAVFRSTGE 412 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 + I D G I N TG +VIG++ L + + A N + Sbjct: 413 GVAITDQNGTIVDVNEAFTKITGFDRDEVIGKNTRILQSGKHDIA-FYENMWEQIQKHGH 471 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKN-EIFLICSGTDITEERRAQERLRILANTDS 241 + E+W G + DIT + + RL LA+ D+ Sbjct: 472 WRGEVWNRAKSGTIYPEILTISAIDFKKGQQPSGYVGVFADITSLKETEARLDHLAHYDA 531 Query: 242 ITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +T LPNR ++ + H++ ++ KV V++LDLD FK +ND GH GD LL +++ Sbjct: 532 LTELPNRLLFRERLIHSLLMSERKKTKVAVLFLDLDRFKNINDTLGHGVGDILLAEIASR 591 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSV 358 + + + R GDEF ++ + + + + +IL+ +I + S S+ Sbjct: 592 LRHVVRMGDTVGRISGDEFCLILEDIQDVTDVVPIVEKILSVFSQTIQINSHMLQISASI 651 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 G+A+SP++ +D+ A++ +D+AMY AKE GR + +T EM Q+ E+ ++ + LR ALE Sbjct: 652 GVAISPDNSNDADALLSFSDSAMYEAKEAGRNTYKFYTAEMTQQALEHSFVQSALRDALE 711 Query: 419 NDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 Q + YQP++ + + +EALVRWQ PERGLIPP FI AE SGLI LG W++ Sbjct: 712 QSQFFVTYQPQLRIKDYSMVGVEALVRWQHPERGLIPPDSFIPIAENSGLIRELGAWILR 771 Query: 478 DVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 Q +W ++ +N R+ VN+SA QL D++ A+ L+E F + +E+TES + Sbjct: 772 TACEQGVQWLNEQVNFGRIYVNVSATQLHDESFTEAVIMCLKETGFPAEKLGLEVTESFI 831 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 +++ + A++V+ F ++G ++ +DDFGTGYSSLS L + PID +K+DQ F+RDI P Sbjct: 832 MKDPQHAINVLSSFKEIGIELAIDDFGTGYSSLSYLKQLPIDKLKIDQSFIRDIPDDPND 891 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 ++ A++A+ +ALNL+VIAEGVES + FL E QG+L+A P+ A AF W K+ Sbjct: 892 MAIAEAVIAMGKALNLEVIAEGVESQIQADFLLDKECTEVQGYLYAHPLTADAFSEWEKQ 951 Query: 657 Y 657 Sbjct: 952 R 952 Score = 77.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 34/143 (23%), Gaps = 1/143 (0%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 A D + L VV + I G I N+ G D+ Sbjct: 130 QAIDKTDKAIAEKALRESEQRYRGVVEDFPIMICTYKPGGEIIFVNQSYCKLFGRTSEDL 189 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 +G + L + A N S + E + + Sbjct: 190 VGSNFLDLIPEG-DRPALISNISGLNTSKPTFVNEHRVILPGDNIGWQRWTNRAIFNRQG 248 Query: 212 NEIFLICSGTDITEERRAQERLR 234 G DIT+ + L Sbjct: 249 EIESYQSIGEDITQRMIQERALE 271 Score = 59.5 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 65/238 (27%), Gaps = 30/238 (12%) Query: 23 LTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGR 82 + +S L T+E L L E + S L S ++ V L G Sbjct: 174 VNQSYCKLFGRTSEDLVGSNFLDLIPE--GDRPALISNISGLNTSKPTFVNEHRVILPGD 231 Query: 83 KINKREWAGNAS---------------AWHDTPAVARDLSHGLSFAEQVVSEAHSAIV-- 125 I + W A R L + ++ + Sbjct: 232 NIGWQRWTNRAIFNRQGEIESYQSIGEDITQRMIQERALESSEAQLSTLIGNLP-GVAFQ 290 Query: 126 -ILDSRGNIQRFNRLCEDYTGLKEHDVIGQ---SVFKLFMSRREAAASRRNNRVFFRSGN 181 + + + + CE+ G +I S +L + ++ Sbjct: 291 CLNNRNWTMLYLSDRCEEIFGYTAESLIKSRYCSYAQLIEPGYREYVW-AAVQNSLKTQT 349 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVH-SGSGK-NEIFLICSGTDITEERRAQERLRILA 237 Y+V + G+ ++ + S I D+TE A+ RL A Sbjct: 350 PYKVLYKLKHSSGESRWMEEQGRGVSTDSTGLTIEGYI---EDVTERIEAENRLNQAA 404 Score = 56.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 39/150 (26%), Gaps = 17/150 (11%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 + L + E V + IL+ G + N++ G D +G+ Sbjct: 3 QMTNDSKFLEKLKNSSDLFEIVFDHQFQFMAILEPDGRVISVNQVALSQQGYTREDFVGR 62 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTC----------KGQRLFLFRNKF 204 ++ S R + ++ + G Sbjct: 63 YFWE-SASWRHLPDWEAIWKKRLKAA------YENRSPIFTDDVYEAHDGSIRHADAVTI 115 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLR 234 S + D T++ A++ LR Sbjct: 116 ALFDSDGKLNGYLIQAIDKTDKAIAEKALR 145 >UniRef50_Q47IR9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IR9_DECAR Length = 952 Score = 852 bits (2202), Expect = 0.0, Method: Composition-based stats. Identities = 193/662 (29%), Positives = 302/662 (45%), Gaps = 19/662 (2%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 + L L ++ + + R +A A R +++ Sbjct: 297 VFMSCNKAFERLLGAPEKSILGKTDYDFF--DKDLADFFREKDRAATAAGR-----PLSN 349 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 + D + A + + L A + + Sbjct: 350 EEWLEFAADGYSGLFETTKTPLYLDGQAIGTLGIAHDITRRKRIEADLRLAAAAFE-SQT 408 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 A+++ D+ G I R N+ TG + +GQ+ L R + A + RS Sbjct: 409 AMLVTDANGVILRVNQAFLRDTGYAVEECVGQTPRILRSGRHDPA-FYQKMWESIRSSGV 467 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 ++ E+W G + G I D++E + A+ R+ LA D + Sbjct: 468 WQGEIWDRRKDGSIYPKWLTISAVLGDSGEVTHYIGLHQDVSERKLAESRIHQLAYYDQV 527 Query: 243 TGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 TGLPNR +Q+ + + A +N ++++DLDNFK +ND GH GD LL+ V + Sbjct: 528 TGLPNRILLQERLSQVMAKCRASSNYGVLLFVDLDNFKTLNDTLGHNVGDLLLKQVGEVL 587 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQS------ALEAMASRILTRLRLPFRIGLIEVYT 354 C +AR GGDEF V+ S EA A +L+ L F++G + Sbjct: 588 RRCSRESDTVARLGGDEFAVIMSELGTDPSAAMQGAEAAARYLLSELGRTFQLGNVIHRN 647 Query: 355 SCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLR 414 + S+G L +++R D A+Y AK GR F P M + E ++ LR Sbjct: 648 TVSIGATLFKGEQESIESLMRQIDLAIYQAKGAGRNTVRFFDPSMEIALRERAAIEEALR 707 Query: 415 KALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRW 474 A+E +Q ++HYQ +I G + E L+RWQ PERG++ P FI AEE+G IV LG W Sbjct: 708 YAIEEEQFLLHYQAQIGEDGRIEGAEVLLRWQHPERGMVSPAIFIPLAEETGDIVLLGSW 767 Query: 475 VILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELT 532 V+ Q+A+W + + L +AVN+SA QL + VL+E + + +ELT Sbjct: 768 VLKQAAAQLARWAESPVMAGLVLAVNVSAVQLRQPDFVEQVTTVLREAGADPGRLKLELT 827 Query: 533 ESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHK 592 ES L+ + E ++ +Q +G LDDFGTGYSSLS L R P+ +K+DQ FVRD+ Sbjct: 828 ESMLVNDVEATIAKMQSLKAIGIGFSLDDFGTGYSSLSYLKRLPLSQLKIDQSFVRDVLV 887 Query: 593 QPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 ++ ++VA+A++L L VIAEGVE+ + L G + QG+LF++P+P FER Sbjct: 888 DANDVAIASSVVALAKSLGLGVIAEGVETEAQRELLAGIGCHCYQGYLFSRPLPIGDFER 947 Query: 653 WY 654 Sbjct: 948 LV 949 Score = 79.5 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 4/135 (2%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 R++ S + ++S + + ++ G N+ E G E ++G++ + F + Sbjct: 269 REMKLERSRLQALLSAIPDPVFVKNANGVFMSCNKAFERLLGAPEKSILGKTDYDFF-DK 327 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIP-TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 A R +R +G E W+ G K I + D Sbjct: 328 DLADFFREKDRAATAAGRPLSNEEWLEFAADGYSGLFETTKTPLY-LDGQAIGTLGIAHD 386 Query: 223 ITEERRAQERLRILA 237 IT +R + L LA Sbjct: 387 ITRRKRIEADL-RLA 400 >UniRef50_B2JN77 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Burkholderia RepID=B2JN77_BURP8 Length = 915 Score = 851 bits (2201), Expect = 0.0, Method: Composition-based stats. Identities = 203/572 (35%), Positives = 306/572 (53%), Gaps = 12/572 (2%) Query: 99 TPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFK 158 A R+ L A + +++ D+ G I R N TG DVIG++ Sbjct: 339 MTAEVRESEAELRIAAVAFD-SLEGMMVTDADGTILRVNSAFTKCTGYTADDVIGRNPRL 397 Query: 159 LFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLIC 218 L R +AA R R G ++ E+W G+ + N + Sbjct: 398 LSSGRHDAAFFRDMWETIHRVGG-WQGEIWDRRKNGEIYPKWLTITAVKAVDGNVTHYVG 456 Query: 219 SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN-HADNN-KVGVVYLDLDN 276 + DITE + A+E+++ LA D++T LPNR ++D + I A N+ ++++DLDN Sbjct: 457 THYDITERKLAEEQIKELAFFDALTHLPNRTLLRDRLKQVIALSAQNHTHGALLFVDLDN 516 Query: 277 FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAM--- 333 FK +ND GH GD LL V++ +L + +AR GGDEF+++ S+ S++ EA Sbjct: 517 FKTLNDTLGHDKGDLLLGQVAVRLLGSVREGDTVARMGGDEFVIVLSDLSRNRDEAASET 576 Query: 334 ---ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 A ++LT L P+ + E T+ S+G L H + +++ +D AMY +KE GR Sbjct: 577 EGAAEKVLTALSRPYYLAGTEFRTTASIGATLFTGHETSIDELLKQSDLAMYKSKESGRN 636 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPER 450 C F P M V E L+ LR+A++ DQL++HYQ ++ V EALVRWQ P+ Sbjct: 637 AICFFDPAMQTVVMERAALEAALRRAIDEDQLLVHYQAQVLNGNRVTGAEALVRWQHPQH 696 Query: 451 GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQT 508 GL+PP +FI AEE+GLI+ LG V+ RQ+A+W R +L +AVN+SA+QL + + Sbjct: 697 GLVPPAEFIPLAEETGLILALGDRVLDTACRQLAQWSLRPDRAHLSIAVNVSAQQLRENS 756 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 T++ + L + + +ELTES L++N E + + G LDDFG GYSS Sbjct: 757 FVTSVLEALARTGADPSRLKLELTESVLVDNVEDIIRKMTLLRTKGVVFSLDDFGVGYSS 816 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 LS L R P+ +K+D+ FVRD+ P + RAIVA+AQ+L L VIAEGVE+ + FL Sbjct: 817 LSYLKRLPLGQLKIDRSFVRDVLDDPNDAVIARAIVALAQSLGLGVIAEGVETQAQRQFL 876 Query: 629 TKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 G + QG+LF +P+P FE + + R Sbjct: 877 ADAGCHAYQGYLFCRPLPIEDFEAFADTFDSR 908 >UniRef50_B7KEH4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KEH4_CYAP7 Length = 1027 Score = 851 bits (2200), Expect = 0.0, Method: Composition-based stats. Identities = 197/666 (29%), Positives = 326/666 (48%), Gaps = 25/666 (3%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 +RES + + S NP + +L + +AE + ++ Sbjct: 366 LRESEERLSTIISTNP-------NGLLILDREGKV---LFVNPAAEILFGRPKKDLMGQI 415 Query: 64 LMMSLTVDE-SDLSVHLVGRKINKREWAGNASAWHD---------TPAVARDLSHGLSFA 113 L + + V+ S++ + K+ W + + L Sbjct: 416 LGLPIIVNNYSEIEILQPTGKMVIARIRQVKILWEEKEAFLASLVDVTDLKGAQKQLKIL 475 Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN 173 +Q ++ +++I D+ G+I+ NR E TG +VIG++ L S + + + Sbjct: 476 KQATEQSPVSVIITDAEGHIEYVNRKFEKLTGYTRQEVIGKNPR-LLKSGKISQDQYKQL 534 Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 SG + E G+ + + I DIT + L Sbjct: 535 WRTLTSGQEWHGEFHNQKKNGELFWESASISPIKNEEGVITHFIAIKEDITRRKAQDRIL 594 Query: 234 RILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQ 291 AN D++TGLPNR D + AI A+ +V V+++DLD FK VND GH +GD Sbjct: 595 AYQANYDALTGLPNRFLAIDRLKLAILQAERQEQRVAVMFIDLDRFKNVNDTLGHEYGDL 654 Query: 292 LLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLI 350 LL+ V+ + CL +AR GGDEFL++ N Q + +A +IL+ L PF + Sbjct: 655 LLKQVAERLKKCLRKSDTVARLGGDEFLIIIPNLKQPSHCKGIAKKILSSLEKPFNLLEE 714 Query: 351 EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLD 410 E + S S+GI L P+ G D A++R+ADTAMY K GGR F +T MN+ + ++ Sbjct: 715 EAFISASIGITLYPDDGDDVNALMRNADTAMYLGKRGGRNDFKFYTLGMNETNRTRIIIE 774 Query: 411 TNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIV 469 L +AL+ ++ + YQP + + +V EAL+RW +P+ G + P FI AEE+GLI Sbjct: 775 NLLHQALKKKEIYLVYQPIMELKTEKVIGAEALLRWNNPQLGQVSPDQFIPIAEETGLIN 834 Query: 470 PLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDV 529 LG WVI ++V +W+ +G + VAVN+S RQ D + + + +++ Sbjct: 835 QLGAWVISQACQEVVQWKAQGTPISVAVNLSPRQFRDSKLLKIITDAIAVNGITNHDLEL 894 Query: 530 ELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRD 589 E+TE L+E+ + ++ Q Q+ + +DDFGTGYS+LS L +FP + +K+D+ F+ D Sbjct: 895 EITEKLLLEDSPGSQGILSQLHQMNFPLSIDDFGTGYSALSYLIKFPFNRLKIDRSFITD 954 Query: 590 IHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVA 649 + + LV+ I+A++ LNLQVIAEGVE++++ L G + QG+ F++P+ Sbjct: 955 MTHSQKAMGLVKTIIAMSHGLNLQVIAEGVETSEQLNSLKSQGCDYAQGYFFSRPLTGEE 1014 Query: 650 FERWYK 655 F + + Sbjct: 1015 FRYYLQ 1020 Score = 72.2 bits (177), Expect = 6e-11, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 71/225 (31%), Gaps = 30/225 (13%) Query: 12 NFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVD 71 L S P + +S + + Q+ +T SL SL ++ Sbjct: 281 QQLLSTAPEEVIGKSIQEVFPEPIGNQLYEGIQQVL---------LTRQPLSLEYSLNIE 331 Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 + ++N+ E L ++S + ++ILD G Sbjct: 332 DKKRFFEARIVQLNQTEIIAVIRDISARKHTELALRESEERLSTIISTNPNGLLILDREG 391 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 + N E G + D++GQ L + S E+ I Sbjct: 392 KVLFVNPAAEILFGRPKKDLMGQ---ILGLPIIVNNYS----------------EIEILQ 432 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 G+ + + K + S D+T+ + AQ++L+IL Sbjct: 433 PTGKMVIARIRQVKILWEEKEA--FLASLVDVTDLKGAQKQLKIL 475 Score = 44.9 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 20/166 (12%), Positives = 53/166 (31%), Gaps = 14/166 (8%) Query: 76 SVHLVGRKINKREWAGNASAWH---DTPAVARDLSHGL----SFAEQVVSEAHSAIVILD 128 + + + I ++E +G + + ++ + + + ++ Sbjct: 209 RIRRLNQSITEKELSGKSIGYLNNLTDMTEQKNAEEVTTHINQEIQALFDAFPDILFRIN 268 Query: 129 SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW 188 +G I + + +VIG+S+ ++F + + +E Sbjct: 269 DQGIILDYKLQEQQLLSTAPEEVIGKSIQEVFPEPIGNQ-LYEGIQQVLLTRQPLSLEYS 327 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + +R F R N+ +I DI+ + + LR Sbjct: 328 LNIEDKKRFFEARIV------QLNQTEIIAVIRDISARKHTELALR 367 >UniRef50_C6X9G9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X9G9_METSD Length = 984 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 190/602 (31%), Positives = 308/602 (51%), Gaps = 9/602 (1%) Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 + + ++ + + +++ G + H L A+ Sbjct: 382 AHWWGVIMIERDHAASTVTSQELGALMSIGRSFGVA---IQRESSDHRLHQAKIAFESTA 438 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 I I D N+ D TG E DV+G L ++ R + R G Sbjct: 439 EGIFITDDELRTIAINQGFTDITGYTEDDVLGNIPNVLEADLKKPEPHREIWKALTREGR 498 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 + E W ++ + + I + DI+E + +Q RL L N D Sbjct: 499 -WRGEFWNQRKNNEQYAEWVTLTAVNNEEGKVINYVGVFADISEIKHSQSRLNELVNRDP 557 Query: 242 ITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +TGLPNR M +L+DHAI +A+ + + ++++DLD FK +ND GH GD+LL +VS Sbjct: 558 LTGLPNRRLMHELLDHAIKYAEREQNEIALLFVDLDRFKAINDTLGHQMGDKLLFEVSQR 617 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSV 358 I + + +AR GGDEF+V+ + +A +I++ L+ F I E++ S SV Sbjct: 618 IRAAVRDSDAVARLGGDEFIVMMDVLREREDAAKVAKKIISSLQNEFLIDGRELFISASV 677 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 GI++ P+ D +I+ AD AMY K G+ C ++ +++Q E L+ LR+AL Sbjct: 678 GISVYPDDSLDVDGLIKAADIAMYQVKNKGKNNHCFYSADLSQNAVERFTLENQLRRALA 737 Query: 419 NDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 DQ ++YQ +++ G + E+L+RW PE G++ P FI AEE+GLI+P+G WV+ Sbjct: 738 RDQFEVYYQAQVSLETGRIIGAESLIRWIHPELGVVSPAKFIPLAEETGLIIPIGEWVLR 797 Query: 478 DVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 QV +W D+G ++ V+VN+S Q+ + +L E + E +++E+TES + Sbjct: 798 QSAMQVKEWHDQGFDIDWVSVNVSGVQIQRSNFADTVYGILVETDCESHLLELEITESTV 857 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 + N E + V + LG ++ +DDFGTGYSSLS L R P+D IK+DQ FVRD+ Sbjct: 858 MHNTEYVIDVFDRIKHLGVRLAIDDFGTGYSSLSHLKRLPLDKIKIDQSFVRDLPNNSDD 917 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 ++ AI A+AQ+L VIAEGVE+ ++ +FL K G + QG+L+++P+ A F + Sbjct: 918 AAIATAINAMAQSLGFTVIAEGVETRQQASFLKKIGCQQGQGYLYSRPVTASEFTALLRA 977 Query: 657 YL 658 Sbjct: 978 EQ 979 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 55/166 (33%), Gaps = 6/166 (3%) Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQ 134 + + + ++ + A +L L+ +++ + I + D G Sbjct: 88 VQIATLEPATAGADYVLYMQDVTERFASEYELRSMLNLLRKLIDASPDYICLKDGAGRWL 147 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA-AASRRNNRVF----FRSGNAYEVELWI 189 N L + G++ +L ++ + + +G E + Sbjct: 148 HANTSGLSLLHLNGVNTQGKTDRELADLTHPNLRDFMQHWQAADEYVWETGQLLREEETV 207 Query: 190 PTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 P G R+ L K + ++ G DIT+ ++ + +LR Sbjct: 208 PLPGGDRV-LDVIKVPLFHDDGSRHGIVTLGRDITDRKQVESQLRQ 252 >UniRef50_Q2BHU8 PAS:GGDEF protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHU8_9GAMM Length = 892 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 191/656 (29%), Positives = 322/656 (49%), Gaps = 17/656 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 Y + +P + + +++ S + D + +A R ++ I+ + Sbjct: 229 IEGRYLACHASDPDDLVAKPEELIGKSVFDFIPLDEAQIIV--EAIREADLKGISKGRQV 286 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNA-SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 +L V L + + E + + + L A + ++ Sbjct: 287 TLQVGRGLREFELSVSRKHDDESSEHHFIVLSRDITERKRHERELHIAATAFD-SQEGML 345 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I D+ I R N TG + + IG + L + + + N ++ Sbjct: 346 ITDAEHRILRVNNAFTRVTGYEAEEAIGNTPAFLQSGKH-SEDFYQTMMESLSKNNYWQG 404 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+W G+ S + + TDIT+ ++ + + LA DS+TGL Sbjct: 405 EVWNQRKSGEIYPQHLTITAVQTSAGEITNYVGAFTDITQRKQDEADIHQLAFYDSLTGL 464 Query: 246 PNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR ++Q+ +D A++ V ++DLDNFK +ND GH GD+LL +V+ + SC Sbjct: 465 PNRRSLQERLDSALSSCRHTRQLGAVFFIDLDNFKNLNDTAGHDQGDKLLVEVANRLNSC 524 Query: 304 LEHDQVLARPGGDEFLVLASNTSQSALEAMAS------RILTRLRLPFRIGLIEVYTSCS 357 + + ++AR GGDEF+V+ N +A +++ ++ P IG + +CS Sbjct: 525 VRNADMVARLGGDEFIVILENLGVDESNVLAQVKDIVAKVILTIQAPLTIGTQAYHPTCS 584 Query: 358 VGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKAL 417 +GIAL E +++ +D AMY AK G+ + F P + + +D +LR AL Sbjct: 585 IGIALFSEKDFS-DEVMKRSDMAMYQAKSSGKNTYRFFDPVAEEALCSLARMDADLRFAL 643 Query: 418 ENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 N QL +HYQP+ + + EAL+RW+ P+RG++ P +FI AE++GLI+P+G WVI Sbjct: 644 SNQQLELHYQPQYRCQT-LIGAEALLRWKHPDRGMVSPAEFIPLAEDTGLILPIGEWVIR 702 Query: 478 DVVRQVAKWRDKG--INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESC 535 +Q+ +W+++ L +AVN+SARQ +++Q+L + +ELTES Sbjct: 703 QACKQLQQWQERPETAELFIAVNVSARQFCQDNFVESVRQLLNTYGVSAEKLKLELTESL 762 Query: 536 LIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPV 595 ++ + E + +Q G + LDDFGTGYSSLS L R P+D IK+D+ F+RD+ + Sbjct: 763 VLMDVEDTIQKMQALRSYGIRFALDDFGTGYSSLSHLKRLPLDQIKIDRSFIRDVPEDQD 822 Query: 596 SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 +V+AI+A+ Q L L V+AEGVE+ ++ AFLT+ + QGFL +P FE Sbjct: 823 DSEIVQAIIAMGQNLGLNVLAEGVETDEQLAFLTELDCLDIQGFLLGRPSSIDKFE 878 >UniRef50_Q5P4Q9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4Q9_AZOSE Length = 813 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 199/672 (29%), Positives = 323/672 (48%), Gaps = 26/672 (3%) Query: 7 STTLYNFLGSHNPYWRLTESSDV----LRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 + L P+ + + P ++ A AR + Sbjct: 151 CNEEFKRLLDFPPHLFAGSLPSLETLFRYNAARGEYGPGDPDEVVASLLAR--------A 202 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 + + ++ + G + + D + L A++V + Sbjct: 203 LHPAPHSFERRRRDGTVLLIQGRPLPQGGFVTTYTD-ITARKRDKERLQLADKVFENSRE 261 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR-------RNNRV 175 AIVI D I N + TG+ G R Sbjct: 262 AIVITDLGHRIVSVNPAYTEITGIAATAAQGTCFRPGSDDGDSGEEGEGAGGPDSRTVWA 321 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG-SGKNEIFLICSGTDITEERRAQERLR 234 ++ E C GQR + I +DIT +RA+ ++ Sbjct: 322 IVGEHGSWSGETTGVRCGGQRYPRTLMINGVRDPETREITHFIAIFSDITARKRAEADIQ 381 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQL 292 LA D++TGL NR ++ + ++ A N ++ V++LDLD FK +ND+ GH GD+L Sbjct: 382 HLAYHDTLTGLANRFSLTARLQLSVAEARRNGQRLAVMFLDLDRFKHINDSLGHPVGDEL 441 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIE 351 L+ V+ + + +AR GGDEF+V+ + +A+++L +L P+ + E Sbjct: 442 LKQVARRLRDAVRETDTVARLGGDEFVVVLQGIGGAHDVTHVAAKLLAQLSAPYCVDTTE 501 Query: 352 VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDT 411 ++T+ S+GI+L P+ +D A++R+ADTAMY AK GR +F +T EMN+ L L+ Sbjct: 502 LHTTASIGISLFPDDSADPAALMRNADTAMYHAKAAGRAKFQFYTDEMNRAATARLDLER 561 Query: 412 NLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 LR A+ + + YQP+ R G + LEALVRW+ P+ GLI PL FI AEE+G+IV Sbjct: 562 KLRGAVARGEFELWYQPQFDSRHGHLTGLEALVRWRHPQDGLIAPLRFIPLAEETGVIVE 621 Query: 471 LGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDV 529 +G WV+ + RQ +W D G+ LR++VN+S RQL ++ + + L +++ Sbjct: 622 IGTWVLREACRQARQWLDAGLPELRISVNLSVRQLREKCLVDTVWTTLAASGLRPGLLEL 681 Query: 530 ELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRD 589 E+TES +++N + A++++Q LG ++ +DDFGTG+SSLS L FP+D +K+D+ F+ D Sbjct: 682 EITESAVMDNPDEAVALLQALKNLGVRIAIDDFGTGHSSLSYLKLFPLDHLKIDRSFISD 741 Query: 590 IHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVA 649 I +V A V++A L L VIAEGVESA + A L + G +E QGF F++P+ A Sbjct: 742 IEHDANDTMIVAAAVSLAHNLGLSVIAEGVESAVQVARLRELGCDELQGFHFSRPVTADV 801 Query: 650 FERWYKRYLKRA 661 E + + A Sbjct: 802 VENLLRSVWRTA 813 Score = 42.6 bits (100), Expect = 0.056, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 37/140 (26%), Gaps = 25/140 (17%) Query: 108 HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFK--LFM---- 161 + E ++ A+ ++D + N + H G LF Sbjct: 123 QRAAMLETILDSIPCAVSLVDRELQLVACNEEFKRLLDFPPHLFAGSLPSLETLFRYNAA 182 Query: 162 ----SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI--- 214 + + + E G L + + Sbjct: 183 RGEYGPGDPDEVVASLLARALHPAPHSFE--RRRRDGTVLLI----------QGRPLPQG 230 Query: 215 FLICSGTDITEERRAQERLR 234 + + TDIT +R +ERL+ Sbjct: 231 GFVTTYTDITARKRDKERLQ 250 >UniRef50_Q7NYX4 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NYX4_CHRVO Length = 795 Score = 850 bits (2197), Expect = 0.0, Method: Composition-based stats. Identities = 202/661 (30%), Positives = 330/661 (49%), Gaps = 17/661 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + + P + L P +L + R R+ + Sbjct: 144 YVNPKLAEIMGYQPEEMEGMTMPQL-------LVPGEAERLRQQLLRRFRDNISVMHYAT 196 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 L D + + V ++ + + L A +V + I+ Sbjct: 197 RGLRKDGVLVDME-VHSRLFELNGRKAVIGVVMDISERLLADTNLRLAAKVFENSAEGIL 255 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 ILD+ I N TG E + +G++ ++ AA ++ ++ Sbjct: 256 ILDAGARIIAVNDAFTRITGYAEEEALGKASRIFSAEQQARAAMQQALADC----GHWQG 311 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+ GQ + + +DIT+ + A+ERL+ LAN D +T L Sbjct: 312 EMLDRRKGGQWYPAELSISALRDEDGLLSNYVAVFSDITQRKEAEERLQFLANHDPLTRL 371 Query: 246 PNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR+ + +D A+ D ++ V+++DLD FK +ND++GH GDQLL ++++ + Sbjct: 372 PNRSRLTASLDEALTRMDGEDGRLAVMFIDLDRFKLINDSFGHQVGDQLLCEIAIRLSRV 431 Query: 304 LEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 + +LAR GGDEF +L S L MAS IL L P + EV+ + S+GI++ Sbjct: 432 VGERGMLARLGGDEFTLLMSGFDSHHQLADMASDILAALGKPLCLEAHEVFITGSIGISV 491 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 P G D+ ++++AD AMY AKE G+ + F MN + FE L L+ LR ALE + Sbjct: 492 FPHDGRDARTLLKNADVAMYRAKEAGKNTYQFFDIGMNTQTFERLLLENGLRMALERHEF 551 Query: 423 VIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 +HYQP+++ + EAL+RW+ P+ GL+PP FI+ AEE+GLI P+G WV+ + R Sbjct: 552 ELHYQPQLSAGERALAGAEALLRWRHPQLGLVPPARFIALAEETGLIKPIGDWVLREACR 611 Query: 482 QVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Q+A W +G+ + R+AVN+S RQ ++ + LQ +++E+TES ++++ Sbjct: 612 QLAAWDAQGLRVPRLAVNLSPRQFGQPSLPAKVAGALQAAGLAAGRLELEITESMIMQSP 671 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 A+S++ + LG + +DDFGTGYSSLS L RFP+D +K+DQ FV + + ++ Sbjct: 672 TEAVSLLSELKSLGVWLSIDDFGTGYSSLSHLKRFPLDTLKIDQSFVEGLPDDDDNAAIA 731 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 AI+A+A+ L QV+AEGVES ++ AFL G + QG+ F +P+PA F + + Sbjct: 732 EAILAMAKKLKFQVVAEGVESEEQAAFLEGKGCHVLQGYHFGRPLPAGEFAALAAGWRRE 791 Query: 661 A 661 A Sbjct: 792 A 792 Score = 77.2 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 23/228 (10%), Positives = 61/228 (26%), Gaps = 7/228 (3%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 Y + L + + + ++ Q+ + R + + + + Sbjct: 21 VNAAYARRVGVSAESLLGRRPEDVFDAEDARQIREQDQQVLNLLSPRQFDEHFVLNGVET 80 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 L + L + + +V ++ I I Sbjct: 81 YLLASK----FPLFDADGRPAGVGSVDTDITQARQEQKAKREAEDRYLALVEQSLVGIYI 136 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 + + N + G + ++ G ++ +L + ++ R F + + Sbjct: 137 M-QDEKLAYVNPKLAEIMGYQPEEMEGMTMPQLLVPGEAERLRQQLLRRFRDNISVMHYA 195 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 G + + + + +I DI+E A LR Sbjct: 196 TRGLRKDGVLVDMEVH-SRLFELNGRKA-VIGVVMDISERLLADTNLR 241 Score = 57.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 7/126 (5%) Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 V+ + + + + D G N G+ ++G+ +F + +A R ++ Sbjct: 2 VNHSPTMMSLKDMDGRYLLVNAAYARRVGVSAESLLGRRPEDVFDAE-DARQIREQDQQV 60 Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR-----AQE 231 + + + G +L +KF + + TDIT+ R+ + Sbjct: 61 LNLLSPRQFDEHFVL-NGVETYLLASKFPLFDADGRPAGVGSVDTDITQARQEQKAKREA 119 Query: 232 RLRILA 237 R LA Sbjct: 120 EDRYLA 125 >UniRef50_C6P3H7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P3H7_9PROT Length = 912 Score = 850 bits (2197), Expect = 0.0, Method: Composition-based stats. Identities = 188/563 (33%), Positives = 286/563 (50%), Gaps = 7/563 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 D + L A + + ++I D+ I N TG DVIG++ Sbjct: 342 DREVQRKAAEQSLQLAASIYENSSEGMMITDADNLIMAINPAFTRITGYAMEDVIGKNPG 401 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 L R + + +G + E+W G+ + I Sbjct: 402 ILKSGRHDMDFYQAMWNEILGTGK-WIGEIWDRRKSGEVYPKWLTINTVFNDDGKVHHRI 460 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLD 275 TDI++++ ++E + AN D +TGLPN D ++ I + + VV+LDLD Sbjct: 461 ALFTDISQKKESEELIWRQANFDHLTGLPNWRMFHDRLEQEIKKSRRVELPLAVVFLDLD 520 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMA 334 +FK+VND GH GD LL++ +L + SC+ +AR GGDEF +L S +E + Sbjct: 521 HFKEVNDTMGHATGDLLLKEAALRLSSCVRESDTVARLGGDEFALLLGELSDQDSIERVN 580 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 IL + PF++G Y S S+G+ + P ++ A++R+AD AMY AK GR + C Sbjct: 581 ECILNKFSAPFQLGNELAYISVSIGVTIYPSDATEIEALLRNADQAMYAAKNSGRNRSCY 640 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 +T M + L +L KAL DQ + YQP + G + EAL+RWQ P RGL+ Sbjct: 641 YTQAMQSVAQNRMSLSNDLHKALAQDQFRLVYQPIVELETGSIHKAEALIRWQHPNRGLV 700 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLA-DQTIFT 511 P DFI AE+SGLI+ +G WV QV WR G ++++++N S Q D Sbjct: 701 SPADFIPIAEQSGLIIQIGDWVFRQAANQVKHWRGAYGKDIQISINKSPVQFKSDSNTHL 760 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 A + L+EL+ +E+TES L++ + +S + F +G QV LDDFGTGYSSLS Sbjct: 761 AWFEHLKELDLSGGCFAIEITESLLMDASDTIVSKLMAFGNIGMQVALDDFGTGYSSLSY 820 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L +F ID IK+DQ FVR++ +L A++ +A L ++VIAEGVE++++ L Sbjct: 821 LKKFDIDYIKIDQSFVRNLAPDSSDLALCEAMIMMAHKLGIKVIAEGVETSEQRDLLRTA 880 Query: 632 GINERQGFLFAKPMPAVAFERWY 654 G + QG+LF++P+ FE Sbjct: 881 GCDYGQGYLFSRPLSTEDFEGLV 903 >UniRef50_B0TF94 Predicted signal transduction domain protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF94_HELMI Length = 853 Score = 850 bits (2197), Expect = 0.0, Method: Composition-based stats. Identities = 192/651 (29%), Positives = 321/651 (49%), Gaps = 9/651 (1%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMS 67 L + L + + + +P + E Sbjct: 163 NPEAERLLGWSLPELLGKKIHSIIHNRRPEGDPIAEADCLVLKTIGAGETYRSDEEYFTR 222 Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL 127 +S+ ++N R G +A+HD + + + L A +V+ I+I Sbjct: 223 KDGALFPVSLVSTPLRVNDR-ITGAVTAFHD-ISDRKKVEERLLLAAKVIETTTEGIMIT 280 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 D+ G I+ N TG E + IG S L R + R+ + +G ++ E+ Sbjct: 281 DAGGVIESVNPAFCRSTGYSESEAIGNSPRILKSGRHDGEFYRKMWKALLETGQ-WQGEI 339 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPN 247 W G+ + S +DITE++R QER++ A D++T LPN Sbjct: 340 WNRRKSGELYAAWLTISAIKDSHGRTTQYAAIFSDITEDKRNQERIKHQAYHDALTDLPN 399 Query: 248 RNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLE 305 R D + AI A N + V++LDLD FK++ND YGH GD LL+ V+ + + Sbjct: 400 RLLFIDRLTQAIAQATRNCYMLAVLFLDLDRFKQINDTYGHALGDLLLQGVAGRLRRAVR 459 Query: 306 HDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLI-EVYTSCSVGIALS 363 +AR GGDEF +L +A +IL LR P+ I + S+GIA+ Sbjct: 460 DSDTVARLGGDEFTILLPQIGSVEDAAKVAQKILASLRQPWSFEGIPSFCITTSIGIAVC 519 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P G ++ ++ +AD AMY AK GR + ++TPE+N FE L ++T LR+AL+ + V Sbjct: 520 PTDGEEAETLMHNADAAMYRAKAQGRNHYQLYTPELNAWAFERLAMETRLRRALDQGEFV 579 Query: 424 IHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 ++YQPK+ G ++EAL+RWQ P+ GL+ P +F+ AE++GLIVP+G W + + + Sbjct: 580 LYYQPKVEAATGNWCAVEALIRWQHPDLGLVSPTEFLRLAEDTGLIVPIGEWCLEEACVR 639 Query: 483 VAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 W+D G+ +R+AVN+SARQ + A+++ LQ+ +++E++E ++ + Sbjct: 640 NKAWQDAGLPPVRMAVNLSARQFQHPNLLAAVEKALQKSGLPPAWLELEISEEVILRFAD 699 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 LA V+ LG + +D +G S ++ L + PID +K+ V D+ ++ V+ Sbjct: 700 LAPIVLGDLKSLGLSLTMDQYGKRDSRITLLQKLPIDRVKIAASQVIDLSACHDARKSVK 759 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 A++A+A++L+L V A+GV + ++ FLT G +E QG LF+ P+ A R Sbjct: 760 ALIALARSLDLHVAADGVGTREQCDFLTAAGCDEIQGHLFSDPLSAEEMGR 810 Score = 97.3 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 51/159 (32%), Gaps = 6/159 (3%) Query: 80 VGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRL 139 + + I + L + V S +++LD+ G + N Sbjct: 106 ITKPIQWAVLRQRVRRLLQAQHTEKALKARETQLSAVASALGEGLIVLDAEGRLTFMNPE 165 Query: 140 CEDYTGLKEHDVIGQSVFKLFMSRREA----AASRRNNRVFFRSGNAYEV-ELWIPTCKG 194 E G +++G+ + + +RR A + +G Y E + G Sbjct: 166 AERLLGWSLPELLGKKIHSIIHNRRPEGDPIAEADCLVLKTIGAGETYRSDEEYFTRKDG 225 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + + + + DI++ ++ +ERL Sbjct: 226 ALFPVSLVSTPLRVND-RITGAVTAFHDISDRKKVEERL 263 >UniRef50_Q2BR92 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR92_9GAMM Length = 944 Score = 849 bits (2195), Expect = 0.0, Method: Composition-based stats. Identities = 181/570 (31%), Positives = 300/570 (52%), Gaps = 12/570 (2%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 + +H + LS A QV A I++ S + N D TG Sbjct: 376 LNRKFTEYHREIESKQRA---LSLASQVFDNASEGIMVTGSDNRLLTVNDAFVDITGYSA 432 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 +V+G++ L R + R+ + + E+W G+ + + + Sbjct: 433 DEVVGKNPKFLQSGRHD-ETFYRSMWQMINTSGYWRGEIWNRRKNGEVFPQWLSIQAVTD 491 Query: 209 SGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--- 265 S I S TD+TE ++ +E+LR L++ D +T LPNR + +D ++ + Sbjct: 492 SAGMARNYIASITDLTERKQVEEKLRYLSDFDPLTNLPNRRLLGYRVDQTLSLSRRQPDQ 551 Query: 266 KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT 325 + ++Y+DLD+FK +ND+ GH FGD++L+ V+ I + ++R GGDEF++L Sbjct: 552 QFALLYIDLDHFKNINDSLGHRFGDEILQKVAKRITELVREGDTVSRLGGDEFMILMPEL 611 Query: 326 SQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 + +A RIL + P + + SVGIA+ P G ++R+AD A++ A Sbjct: 612 HKLEQAANLAERILHNIAQPLENDSH-LMITPSVGIAVYPNDGDSFDKLLRNADAAVHFA 670 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALV 443 K GR + +T EMNQR E L ++ +LRKA+EN + + YQP++ R G + +EAL+ Sbjct: 671 KRQGRNNYQFYTAEMNQRASERLQVEISLRKAVENQEFELFYQPQLNLRDGSLAGVEALI 730 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISAR 502 RW+ P GL+PP FI AEE+GLI+ +G WV+++ RQ A+W K ++VN+S R Sbjct: 731 RWRHPNEGLVPPNRFIPLAEETGLILQIGSWVLVEACRQGAEWAAKSTEPFTMSVNVSVR 790 Query: 503 QLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDF 562 Q + ++ L + +E+TES L++++E L+++ + +LG Q+ LDDF Sbjct: 791 QFR-PELVEEVRSALLTSGLSPKSLVIEITESTLMQDEEKTLTLLHELKELGVQLSLDDF 849 Query: 563 GTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESA 622 GTGYSS++ L RF +D +K+D+ F+ D+ + P ++ AI+ VA L +AEG+E Sbjct: 850 GTGYSSMAYLKRFNLDQLKIDRAFISDLPQNPDDAAITSAIIDVASHFGLVTVAEGIEKP 909 Query: 623 KEDAFLTKNGINERQGFLFAKPMPAVAFER 652 ++ FL G E QG+ + KP+PA Sbjct: 910 EQAEFLASVGCIEGQGYYYEKPIPANDLTE 939 >UniRef50_Q47HF3 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Proteobacteria RepID=Q47HF3_DECAR Length = 994 Score = 848 bits (2193), Expect = 0.0, Method: Composition-based stats. Identities = 193/657 (29%), Positives = 322/657 (49%), Gaps = 16/657 (2%) Query: 5 RESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSL 64 R S L LG +L ES +++ P+ + A+ A +R+ I Sbjct: 196 RWSEGLRQMLGYEQEPEQLAESMNLI--------HPEDRPAVEAQVTASLRDRNSILIGE 247 Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHD--TPAVARDLSHGLSFAEQVVSEAHS 122 D V GR + E + A+ V + Sbjct: 248 FRIRHHDGGWRWVESRGRIVEFDEAGQPTLMIGTMLDITERKLAEAEHRLADLVFTGIGE 307 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 I I D++ NI R N TG + +++GQ+ L S + A Sbjct: 308 GICITDAKRNILRINDAFSTITGYQADEIVGQNPR-LLKSGVHSPAFYAEIWKTIDQYGN 366 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 ++ E+ G + + + + I +D++E + A ER++ L++ D++ Sbjct: 367 WQGEITNRHKDGSLVTEWLSISSLRDTTGTASHYIGIFSDLSERQAAAERIQYLSSYDTL 426 Query: 243 TGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 T LPNR+ D ++ A+ A ++ LDL+ F+ +ND G GD++L +V+ + Sbjct: 427 TELPNRHLFDDRLNQALLTARRFERGTALILLDLNRFRLINDTLGPPAGDEILVEVTRRL 486 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 + + R G+EF + +N S A+A R+L + +PF + V + S+G Sbjct: 487 KLQVREGDTVGRRAGNEFGFVMANLSHERDALALAQRMLDAISVPFSVAGQSVAITASIG 546 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 I++ P++G + A++R AD A+ AK+ GR F ++PEM+ L +++ LR AL Sbjct: 547 ISVFPKNGENGEAMLRSADAALLRAKQSGRNTFSFYSPEMDADAARRLSIESALRDALAR 606 Query: 420 DQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 D+ +HYQP+++ G + +EAL+RW S G I P++FI AEE+GLI+ +G WV+ Sbjct: 607 DEFCVHYQPQVSLDSGHMIGMEALLRWNSALLGPISPVEFIPIAEETGLIMQIGDWVLRT 666 Query: 479 VVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 Q W D G+ L VAVN+S RQ + + L E +++E+TES I Sbjct: 667 ACHQTKAWLDLGLLPLHVAVNLSPRQFRQADLPAQVAHALAESGLPAGALELEITESAFI 726 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 ++ + A+++ + LG ++ LDDFGTGYSSL+ ++RFP D IK+DQ FVRDI PV+ Sbjct: 727 DDIDDAVAMCSKLKSLGIKLSLDDFGTGYSSLAYVSRFPFDKIKIDQSFVRDIVNNPVNA 786 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 ++ A + + ++LNL V+AEGVE+ + AFL + QG+LF++P+P F Sbjct: 787 AIASAAIVMGRSLNLSVLAEGVETEAQAAFLRSRRCDAIQGYLFSRPLPPEEFAPLL 843 Score = 78.8 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 62/198 (31%), Gaps = 8/198 (4%) Query: 44 LQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVA 103 L +E+ IRE S + ++V + + HL R+ N AW + Sbjct: 105 LDDQSEEERGIREGAADYVSKPVKMSVLIARIRAHLEVRRAQW--LLANQKAWLEQEVER 162 Query: 104 RDLSHGL--SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH-DVIGQSVFKLF 160 R + + + I D N R++ G ++ + + +S+ L Sbjct: 163 RIAENTQLDRHLTLALERSGFGIWEHDPVRNRNRWSEGLRQMLGYEQEPEQLAESMN-LI 221 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH-SGSGKNEIFLICS 219 A + + E I G ++ + +I + Sbjct: 222 HPEDRPAVEAQVTASLRDRNSILIGEFRIRHHDGGWRWVESRGRIVEFDEAGQPTLMIGT 281 Query: 220 GTDITEERRAQERLRILA 237 DITE + A+ LA Sbjct: 282 MLDITERKLAEAE-HRLA 298 >UniRef50_C6BWZ0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWZ0_DESAD Length = 716 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 170/678 (25%), Positives = 321/678 (47%), Gaps = 32/678 (4%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 P + S + P+ + + ++ + S + Sbjct: 44 YVNPSAQKYFGLPPEKCVG-------LSIFDFIHPEDKETTAQDFNKWQKDPSTNFSYIN 96 Query: 66 MSLTVDESDLSVHLVGRKINKRE--------WAGNASAWHDTPAVARDLS---------- 107 + ++ S + + E + ++ +T R Sbjct: 97 RQMHLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSHKETEEELRKAKDQLKITVDQQ 156 Query: 108 -HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 L A V + + I DS NI+ N TG E +VIGQ+ L +R Sbjct: 157 TEQLKLATAVFKHSSEGVTITDSNNNIRYINDAFTHITGYSEEEVIGQNPSILKSNRH-K 215 Query: 167 AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEE 226 + + ++ +E E+W G+ + + + + I DI+E Sbjct: 216 PSFYKGVWKSIKTNGMWEGEIWNRRKNGEVFPEWISIKAITDVKGEVVNYIAVFRDISEA 275 Query: 227 RRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAY 284 + +Q +++ A D++TGLPNR + D I AI +++ K + ++++DLDNFK +ND+ Sbjct: 276 KASQRKIQHQAYHDALTGLPNRTLLIDRIRKAIASSNDRKSCIALLFIDLDNFKNINDSL 335 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRL 343 G++ GD +L+ + I ++ ++R GGDEF+++ + + MA I+ Sbjct: 336 GYVIGDSVLQQAAARIREFIDEKDTVSRIGGDEFVIMLKDLQDKHDAAVMADTIINLFAQ 395 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 + + + S+GIAL PE G +++R+ADTAM AK+ GR ++ +FTP + + Sbjct: 396 ALTVESHQFTITPSIGIALYPEDGKTPYSLVRNADTAMNKAKQEGRNRYHLFTPGLTESA 455 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYA 462 + ++ LR+ ++ ++YQPK+ + +EAL+RW P+ +I P +FI A Sbjct: 456 LRRISMENQLRQTASDNGFTVYYQPKVNLHDNTIVGMEALIRWIQPDGTIISPAEFIPLA 515 Query: 463 EESGLIVPLGRWVILDVVRQVAKW-RDKGINLRVAVNISARQLADQTIFTALKQVLQELN 521 EE+GLIVP+G V+ + + G NL+V+VN+S RQ + + + ++ Sbjct: 516 EETGLIVPIGEQVLEAACLDTVELNQRFGTNLKVSVNLSLRQFKQEQLMKNIMDIIAMTA 575 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 +++E+TES ++++ E +++++ +LG + +DDFGTGYSSLS L P+ +K Sbjct: 576 ICPSCLELEITESTVMDDIEQTKTILEKMDKLGITLSIDDFGTGYSSLSHLKNMPMHTLK 635 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +DQ FV + Q LV+AI+++A++ +L +AEG+E+ ++ ++ + G QG+ + Sbjct: 636 IDQSFVAGLPHNKSDQKLVKAIMSLARSFDLSTVAEGIETPEQYNYMRELGCEVMQGYYY 695 Query: 642 AKPMPAVAFERWYKRYLK 659 + P+P F + LK Sbjct: 696 SPPVPLEEFAALIEASLK 713 Score = 76.8 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 40/120 (33%), Gaps = 4/120 (3%) Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 + +D+ G N + Y GL +G S+F + ++ N+ Sbjct: 26 IENTDDLFTQVDTDGRFLYVNPSAQKYFGLPPEKCVGLSIFDFIHPEDKETTAQDFNK-- 83 Query: 177 FRSGNAYEVELWIP--TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 ++ + G ++ S + ++ C G DIT + +E LR Sbjct: 84 WQKDPSTNFSYINRQMHLNGSFYYMLWTITAVKDSEQKILWFNCIGRDITSHKETEEELR 143 >UniRef50_A6WKV6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=6 Tax=Shewanella RepID=A6WKV6_SHEB8 Length = 921 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 180/656 (27%), Positives = 315/656 (48%), Gaps = 17/656 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTE--TTEPDRTLQLSAEQAARIREMTVITSSL 64 + +S L + E DR S ++ L Sbjct: 274 CNRSVEKAWEMPRSEIVGKSDVELFGAEIANIFLEGDRLAIESGM-------PIIVAECL 326 Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 + + L + + E+ G + +++ L+ A V + + Sbjct: 327 DGNEAKNHLWLETLKLPTLNPQGEFVG-VIGMTRNISKHKEVEEQLTLATNVFKNSVEGV 385 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 V+ D GNI N + TG +++GQ+ R + A + +G + Sbjct: 386 VVTDRHGNITDVNGAFFEITGYVREELLGQNPRIFSSGRHDKAFFDKLWNALLANGK-WN 444 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G + + + DI+ ++ + +L LA D +T Sbjct: 445 GEIWNRRKNGTIFPQNITISTIYDEVGDVRYFVAVFADISAQKENEAQLTHLAYFDPLTH 504 Query: 245 LPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR + + A ++ V +D+D FK +ND++GH GD++L +++ + S Sbjct: 505 LPNRMKFMMQLKQEVRQAKRLNLQLATVMIDVDLFKHINDSFGHSIGDEMLVELAKRLRS 564 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQSALEAMA-SRILTRLRLPFRIG-LIEVYTSCSVGI 360 + VL+R GGDEF+ L S + +A +++ PF + + + S+G+ Sbjct: 565 QVGDQDVLSRIGGDEFVALISGIDNNEDATVAINQLRQVFEQPFIVSTGDHLRLTASMGV 624 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 +L P G+D+ ++R+AD AMY AK GR + +T + Q+ FE+L L + L A+E + Sbjct: 625 SLYPNDGTDADTLLRNADAAMYRAKNDGRNNYAFYTESLTQQSFEHLKLQSALYGAIEQN 684 Query: 421 QLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 L + YQPK+ + EAL+RW P+ GLI P FI AE+ GLI +G WV+ Sbjct: 685 ALYLMYQPKLDLVSRKTVGFEALLRWHDPQLGLISPAVFIPVAEKIGLIHEIGLWVLETA 744 Query: 480 VRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 RQ +W +G + R+AVN++ +QL + +K+VL E +++E+TES +++ Sbjct: 745 CRQGMRWLREGKHFGRIAVNVAGQQLQRSSFVDDVKRVLAETGLPAKHLELEVTESVMMQ 804 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 N +LA+ +++ LG ++ +DDFGTGYSSL+ L + PI +K+DQ FVRDI + + Sbjct: 805 NPDLAIRDLKRLGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTA 864 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 + +A++A+ AL L +IAEGVE+ ++ FL +N ++ QG+LF++P + + Sbjct: 865 IAKAVIALGHALKLDIIAEGVETKEQADFLQQNQCDQAQGYLFSRPQLPEDLDAFL 920 Score = 50.3 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 69/236 (29%), Gaps = 30/236 (12%) Query: 28 DVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTV-DESDLSVHLV------ 80 +L S L + Q + R + I S + +SL ++ Sbjct: 145 SLLFVSELTELVSQSQLIIDTRQHSDWRTCSAIGSVICLSLAWPSGANFGFLCFYHNEAH 204 Query: 81 GRKINKREWAGNASAWHDT----PAVARDLSHGLSF----------AEQVVSEAHSAIVI 126 G + A S + LS + + I + Sbjct: 205 GVDSKTLQLAKLISDSIQRQLGEILSQHSAAEALSRGAPTCVDTVDLQTFIDSFEEHIWM 264 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 + G NR E + +++G+S +LF A +R+ SG Sbjct: 265 KNVAGIYTLCNRSVEKAWEMPRSEIVGKSDVELF-GAEIANIFLEGDRLAIESGMPI--- 320 Query: 187 LWIPTCKGQR----LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 + G L+L K + +I +I++ + +E+L LA Sbjct: 321 IVAECLDGNEAKNHLWLETLKLPTLNPQGEFVGVIGMTRNISKHKEVEEQLT-LAT 375 >UniRef50_A1RPJ9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=16 Tax=Proteobacteria RepID=A1RPJ9_SHESW Length = 1511 Score = 846 bits (2188), Expect = 0.0, Method: Composition-based stats. Identities = 193/632 (30%), Positives = 324/632 (51%), Gaps = 10/632 (1%) Query: 36 ETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAG--NA 93 E P+ + E A ++ T + + G+ + Sbjct: 880 ENMHPEDREKFKYELAEHLQGRTPFFEIEYRIEGAFGKWIWILDRGKVVETDAHMQPMRM 939 Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 + + + + + L + QV++ + A+V+ I+ N TG E + Sbjct: 940 TGTNRNITSRKLIENELVLSSQVLNSMNEAVVVAGLDYKIRSVNPAFSAITGYSERQITD 999 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 + + L ++ + + E+WI + + + ++ Sbjct: 1000 KYLVHLAY--KQQRELFNSIEQQLLRHKHWVGEIWIRNKQRKAILVWLEINQVIDIKGET 1057 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVY 271 + TDITE ++A++ LR LA+ D++TGLPNR QD ++HAI A N V +++ Sbjct: 1058 SHFVAVFTDITERKKAEQDLRFLASFDTLTGLPNRTLFQDRLNHAITQAHRANNIVALLF 1117 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE 331 LDLD FK +ND+ GH GD LL+ + + + + +AR GGDEF ++ +++ Sbjct: 1118 LDLDRFKHINDSMGHHVGDLLLKAAAKRLQNAVREGDTVARLGGDEFTIILEGVAKTKAA 1177 Query: 332 A-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 ++ ++L + PF + + S S+GI+L P ++ ++I+ ADTAMY AK GR Sbjct: 1178 TLISEKVLRAFQTPFLLEDKSLTISTSIGISLYPNDADNADSLIKFADTAMYHAKSLGRN 1237 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPE 449 F +T ++N+ ++ L+ L++A+ ++L + YQPK + R G + LEAL+RW E Sbjct: 1238 NFQFYTHKLNEIATRHVLLEAGLKQAIHRNELSLVYQPKFSLRDGSLTGLEALLRWHHTE 1297 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQT 508 G I P++FI AEE+G+I +G WVI +Q+A+W G N + +AVN+SARQL Sbjct: 1298 LGPISPVEFIPLAEETGIINQIGHWVINHACQQLAEWNALGFNNISMAVNLSARQLK-AD 1356 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 I + ++ L +++ELTES ++ N + ++S++ + LG + +DDFGTGYSS Sbjct: 1357 IISTIEVALAVSGLPAQSLELELTESMIMGNPQDSVSILSKLKALGLTIAIDDFGTGYSS 1416 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 LS L RFPID +K+D+ FVRDI P ++ AI+A+A +L L V+AEGVE+ + FL Sbjct: 1417 LSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQAQLNFL 1476 Query: 629 TKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 G +E QGFL +KP+ A K+ Sbjct: 1477 GLQGCDEVQGFLLSKPLSAKDCLTLLGNQSKQ 1508 >UniRef50_Q47FU0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47FU0_DECAR Length = 1006 Score = 846 bits (2186), Expect = 0.0, Method: Composition-based stats. Identities = 187/646 (28%), Positives = 315/646 (48%), Gaps = 6/646 (0%) Query: 17 HNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLS 76 + + + P+ + I + + + Sbjct: 360 YRIFEFTKRETGYQYQDFLAKIHPEDRSVVDKTLHESIASRQPASLKHRLLMPDGRVKYV 419 Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF 136 + + + +++ + V + AI+I D + I Sbjct: 420 LESCETEYGRDGTPLRVIGTSQEVTAQQEMLAQMQLLASAVQYSGEAILITDVKNKILTV 479 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR 196 N TG + +G+ L R R ++ E+W G Sbjct: 480 NPAFTRLTGYTSEEAVGRDPSFLSAGRTMPEEYER-MWNGIAERGFWQGEIWDRRKDGGI 538 Query: 197 LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLID 256 + + V G + + TD++ ER A+ERL +A+ D +TGL NR +++ +D Sbjct: 539 YPKWMSISVIRGEDGMIRYHVAHFTDVSSERAAEERLHHMAHHDVLTGLLNRLSLKGRLD 598 Query: 257 HAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPG 314 A+ A ++V V+++DLD FK +ND GH GD+LL +V+ + + V+AR G Sbjct: 599 QALAAARRDGSRVAVLFVDLDRFKVINDTLGHHVGDELLIEVANRLRDGVRDSDVVARVG 658 Query: 315 GDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAI 373 GDEF+++ S SA+ +A +++ + ++IG ++Y++ S+GIA+ P G D + Sbjct: 659 GDEFVIMLSGVEHTSAVAMVAEKLVFSVGQSYQIGGYDLYSTPSIGIAIYPTDGEDGDIL 718 Query: 374 IRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW- 432 +++AD AMY AK GR F F +MN+ E L + LR+AL N + ++YQP I Sbjct: 719 MKNADAAMYHAKMAGRNNFQFFDAKMNEAALERLNTEHALRRALANQEFCLYYQPVIDLA 778 Query: 433 RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN 492 V SLEAL+RW PE+GL+ P FI AEE+GLI PLG WV+ RQ+A + GI+ Sbjct: 779 SNRVASLEALIRWNHPEKGLLLPGKFIGIAEETGLIQPLGEWVLWAACRQLADFAAAGIS 838 Query: 493 -LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFS 551 +++ VNISA Q+ + + + V++ + + + E+TES +E + ++ + Sbjct: 839 GIKMGVNISAIQMRNGNLPLLARGVIEAYDIDPRNLIFEITESVAMEQPTETVRILDLLN 898 Query: 552 QLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALN 611 +G V +DDFGTGYSSLS L FPI+ +KLD+ FV I ++ + A + +A +L Sbjct: 899 AMGVSVAIDDFGTGYSSLSYLRMFPINHLKLDRSFVEQIGEEIDGCVICDATIGLAHSLE 958 Query: 612 LQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 L+V+AEGVE+ + +L G + QGFLF++P+PA + ++Y Sbjct: 959 LKVVAEGVETQAQLDYLRSRGCDMVQGFLFSRPVPADEVLAFIRQY 1004 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 845 bits (2185), Expect = 0.0, Method: Composition-based stats. Identities = 172/583 (29%), Positives = 292/583 (50%), Gaps = 11/583 (1%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 +E+ L A ++ + + D+ I + N + TG Sbjct: 194 QEFNAMLDTLQQREQELVQSRDALRIAATAFE-SNDVMFVCDADWRILQVNSAFQRVTGY 252 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 + IG++ L S + RS +++ E+W G+ + Sbjct: 253 LPEEAIGKAPRDLMGSGIQTQEFYEVMNESIRSNGSWQGEVWDRRKNGETYPAWTTITAV 312 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA--DN 264 + + + +D + + A+ ++ L DS+T LPNR + ++ A++ A Sbjct: 313 RSESGDVTHYVANLSDFSARKAAENEIKTLVYFDSLTMLPNRRMLMGRLETAMHAALSTG 372 Query: 265 NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN 324 + ++++DLD+FK +ND GH GD LL+ V+ + SC+ +AR GGDEF+V+ Sbjct: 373 HLGALLFVDLDDFKTLNDTLGHHQGDILLQQVANRLQSCVREADTVARLGGDEFVVMLEG 432 Query: 325 TSQS------ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHAD 378 S+ EA+A +++ L P+ +G + ++ SVGI + + ++ AD Sbjct: 433 LSKDVAEASTQAEAVAGKVMQALNQPYDLGTLTRSSTPSVGITVFGKQQESLDEPLKRAD 492 Query: 379 TAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRS 438 AMY AK GR +F P+ V L+ LR ALE +Q V++ QP+I+ V Sbjct: 493 LAMYQAKAAGRNTSRLFDPKTQAAVTLRADLEAALRTALEEEQFVLYLQPQISEDVRVTG 552 Query: 439 LEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVA 496 EAL+RWQ P RGL+ P +FI+ AE+ G+IVP+G WV+ +Q+A W + ++ +A Sbjct: 553 AEALIRWQHPTRGLVMPGEFIAVAEDCGMIVPIGNWVLNTACKQLALWATQPAFAHMTIA 612 Query: 497 VNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQ 556 VN+SA+Q + L + + +E+TES LI N + + +++ G Sbjct: 613 VNVSAKQFHQHDFVEQVLDALSRHGAQASGLKIEITESMLIANVDDVIVRMEELQHHGVG 672 Query: 557 VHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIA 616 +DDFGTGYSSL+ L R P+D +K+DQ FVRD+ ++ IVA+A ++ L VIA Sbjct: 673 FAMDDFGTGYSSLTYLKRLPLDVLKIDQSFVRDVLVDTNDAAIANMIVALANSMGLSVIA 732 Query: 617 EGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 EGVE+ ++ +L ++G + QG+LF++P+P FE +L+ Sbjct: 733 EGVETVEQMQYLARHGCHAYQGYLFSRPVPVERFETSLADFLR 775 >UniRef50_B5VXY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Arthrospira RepID=B5VXY3_SPIMA Length = 1092 Score = 845 bits (2184), Expect = 0.0, Method: Composition-based stats. Identities = 202/661 (30%), Positives = 321/661 (48%), Gaps = 10/661 (1%) Query: 4 VRESTTLYNFLGSHNP--YWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 +RES + S + + L + R + I +T + Sbjct: 434 LRESEARLRTIISTSTNGLVVVNRKGRALFINPAAEALFGRPASQLEGELIGIPLVTKES 493 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 + L + L D V + +I+ + ++ D + L + ++ Sbjct: 494 TELEI-LRQDGQLKIVRMRVVEISWEQETAYLASLTDV-TDFKKTEDQLKMFSRACDQSP 551 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 +IVI DS G+IQ N E+ TG K +VIGQ+ L SG Sbjct: 552 VSIVITDSEGDIQYVNPKFEEITGYKAGEVIGQNPRILKSGYTTEPE-YDVLWRQITSGK 610 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 + E G+ + + I DIT+++ +E L AN D+ Sbjct: 611 QWSGEFHNKKKNGELFWEHASICPMRDEEGYITHFIAVKEDITQQKHNEEILAHQANYDA 670 Query: 242 ITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +T LPNR + D + AI A + V V+++DLD+FK +ND GH GD LL++ + Sbjct: 671 LTDLPNRTLIFDRLRQAITEAQVHHSNVAVMFIDLDHFKNINDTLGHELGDFLLKEAGMR 730 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSV 358 + C+ + R GGDEFL++ E +A+++L L PF + E + S S+ Sbjct: 731 LRGCIRKTDTVGRLGGDEFLLIIPKLDDLVQAEYIANQVLDVLGEPFNLCGEEAFISASI 790 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 GIA P+ G + + ++R+ADTAMY AK+ GR F FT MN + ++ LR A+ Sbjct: 791 GIASYPQDGKNVSTLVRNADTAMYAAKQEGRNVFAFFTQNMNDEAQSRIIIENQLRHAIS 850 Query: 419 NDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 ++L + YQP I ++ EAL+RW +PE G I P FI+ AEES LIV LG W++ Sbjct: 851 RNELSVVYQPFIHLNTSQIVGAEALMRWYNPELGNIRPDQFIAIAEESRLIVDLGEWILS 910 Query: 478 DVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 ++VA W +G N L VAVN+S RQL + + + + +++E+TE L Sbjct: 911 QACQEVANWHQQGNNGLWVAVNMSPRQLRTPNLVNVIIEAIANNGLSSDCLELEITERSL 970 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 +E S+I+Q + L ++ +DDFGTGYSSLS L RFP +K+D+ F+ D+ + Sbjct: 971 VEEVPGVQSLIKQLNHLKIRLAIDDFGTGYSSLSYLKRFPFSVLKIDKSFISDLPDDQDA 1030 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 +LV+ ++ +A L L V+AEG+E+ + FL G + QG+LF+KP+P F + +R Sbjct: 1031 IALVKTMITMAHGLGLVVVAEGIETTAQLDFLCNQGCDYGQGYLFSKPLPPAQFRAYLQR 1090 Query: 657 Y 657 Sbjct: 1091 N 1091 Score = 60.7 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 45/135 (33%), Gaps = 21/135 (15%) Query: 100 PAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 L + ++S + + +V+++ +G N E G + G Sbjct: 428 ITAEAALRESEARLRTIISTSTNGLVVVNRKGRALFINPAAEALFGRPASQLEG------ 481 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 + + + E+E+ GQ + S E + S Sbjct: 482 -----------ELIGIPLVTKESTELEI--LRQDGQLKIVRMRVVEISWE--QETAYLAS 526 Query: 220 GTDITEERRAQERLR 234 TD+T+ ++ +++L+ Sbjct: 527 LTDVTDFKKTEDQLK 541 >UniRef50_Q607T2 Sensory box protein/GGDEF domain protein n=2 Tax=cellular organisms RepID=Q607T2_METCA Length = 1346 Score = 844 bits (2183), Expect = 0.0, Method: Composition-based stats. Identities = 192/635 (30%), Positives = 302/635 (47%), Gaps = 12/635 (1%) Query: 35 TETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKR-----EW 89 E S A + + D + K R E+ Sbjct: 706 DGWLEGMHPEDRSRWICAY-SAAFDARKPFEIEYRLRRRDGEYRTILGKATPRFDAGGEF 764 Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH 149 G + D + + L A +V +I++ D+ I N D TG Sbjct: 765 IGYIGSCID-ISDRKKGDESLLLAGKVFEAVRESIIVTDANRVIVAVNPAFSDMTGYSPE 823 Query: 150 DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS 209 + +G++ L R +++ E W G+ + Sbjct: 824 EAVGRTPAFLQSGRH-GKEYYAAMWRAVDQEGSWQGEFWNRRKNGELFAVLETIVTVRDE 882 Query: 210 GKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--V 267 + I DI+ + A+E + LA D ++ LPNR + + ++A+ A+ K + Sbjct: 883 TGAMVNYIGVAADISSLKEAEEHIHHLAYYDPLSALPNRRYLMERAEYALALAERRKEEL 942 Query: 268 GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ 327 VV+LD+D+FK VND+ GH GD+LL V+ I +AR GGDEF +L + + Sbjct: 943 AVVFLDVDHFKDVNDSLGHQVGDELLVRVATQIKEFTRETDTVARLGGDEFALLLPDLGR 1002 Query: 328 SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEG 387 A+ +A +IL LR PF + S+GI+L P G+D ++R+ADTAMY AK+ Sbjct: 1003 DAVSQVADKILAALRKPFEHSGQTFAVTGSIGISLYPHDGTDFETLLRNADTAMYHAKQQ 1062 Query: 388 GRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQ 446 GR QF + P MN + L + + LR+A+ +L +QP+I G + EALVRWQ Sbjct: 1063 GRNQFRFYDPGMNVDILARLTVLSELREAIPAGELRTFFQPEIDLANGTLVGAEALVRWQ 1122 Query: 447 SPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLA 505 P RGL+ P FI AE + LI+ + WV+ D R +A+W+ + V VN++AR Sbjct: 1123 HPTRGLLSPDQFIPVAESNDLIIAISDWVLEDTCRHLAQWKKADQAPITVGVNLAARHFR 1182 Query: 506 DQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTG 565 D + +K +L + +ELTES L++ D + V+Q+ LG + +DDFGTG Sbjct: 1183 DPRLVPRVKSLLCRYGVPGSSLQLELTESTLLDADAQTMIVLQELIALGCSLSIDDFGTG 1242 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YSSLS L PI +K+DQ FVRDI +++ +VA+ +L L+VIAEGVE+ ++ Sbjct: 1243 YSSLSYLKNLPIATLKIDQSFVRDIAFDADDRTISGTVVALGHSLGLKVIAEGVETEEQR 1302 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 L + G + QG+LF++P+ + F +W + R Sbjct: 1303 RILLEQGCDFGQGYLFSRPLSSKEFIKWRMEHALR 1337 Score = 95.3 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 4/141 (2%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 ++ + E V A+ AI++ D I N D G ++ G + Sbjct: 344 MQAALEAEKERADLSRRFEYFVRYANDAILLADRDHRIVDVNDRALDLYGYSREELAGMT 403 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 + + E R + R G + E G + + + S G + + Sbjct: 404 LADVVAGDVEGVEHGRLDEALARGGGVW--ESVHTRKDGVPVPVELSVRSISVEGSDFVQ 461 Query: 216 LICSGTDITEERRAQERLRIL 236 D+TE +R + L Sbjct: 462 --AIVRDVTERKRIELALARQ 480 Score = 69.9 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 6/199 (3%) Query: 39 EPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHD 98 E + A A IR + ++ + + S +V A Sbjct: 588 EAGLAAGVRASGAFPIRRFGKVVGAINL-YAGERGFFSEDIVAVLDTMAMDVSFALDILA 646 Query: 99 TPAVARDLS----HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 A + A I + D+ FN + ++TG +G Sbjct: 647 RDAERERSEMRLRESEERFRLAANSAPVLIWMGDTARGCTFFNDMWLNFTGRSLEYELGD 706 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 + + + F + +E+E + G+ + +G I Sbjct: 707 GWLEGMHPEDRSRWICAYS-AAFDARKPFEIEYRLRRRDGEYRTILGKATPRFDAGGEFI 765 Query: 215 FLICSGTDITEERRAQERL 233 I S DI++ ++ E L Sbjct: 766 GYIGSCIDISDRKKGDESL 784 >UniRef50_C6XBJ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBJ6_METSD Length = 1150 Score = 844 bits (2182), Expect = 0.0, Method: Composition-based stats. Identities = 193/657 (29%), Positives = 301/657 (45%), Gaps = 17/657 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + + H L + + E L+ E R+ E + Sbjct: 501 CSNQWQEEFGHQQGSLLGLNHYDVHPDIPEKWRQAHQRALAGE---RLEEEEDLW----- 552 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWH-DTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + D L + + + + L A V + A++ Sbjct: 553 -IRADGQHLWTRWMITPWMDDSQTIQGIIISSENISARKQAEEELRLAHTVFEHSSEAML 611 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 + D+ NI N + TG +VIG++ L S R+ + + + Sbjct: 612 VTDADNNIITINPAFSEMTGYSLEEVIGKNPKIL-SSGRQGKEFYQELWNTLETSGEWRG 670 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+W G+ + + +DITE++RA + AN D +T L Sbjct: 671 EIWNRRKSGEEYAEWLAINNIYSEDGKLFRRVALFSDITEKKRADALIWNQANYDLLTQL 730 Query: 246 PNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR D + I + + ++ ++++DLD FK+VND GH GD LL + S I Sbjct: 731 PNRRLFSDRLQQEIKKSQHDHSQFALLFIDLDRFKEVNDTLGHSHGDYLLIEASHRIQRH 790 Query: 304 LEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 L+ + R GGDEF V+ +N ++ +A R+L L P+ + VY S S+GI + Sbjct: 791 LKETDTVGRLGGDEFTVIIANLPDPSVMTLIAQRVLDALAAPYDLEGEIVYLSASIGITV 850 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 PE + S ++++AD AMY AK+ GR +F FTP M + + +LR AL +Q Sbjct: 851 FPEDATTSAELLKNADQAMYEAKKNGRNRFSFFTPMMQAMAQARMRMMRDLRNALGLNQF 910 Query: 423 VIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 +++QP + + EAL+RWQ PE G I P +FI AEE+GLI +G WV + Sbjct: 911 TVYFQPIVDLSSQRIHKAEALIRWQHPELGFISPAEFIPLAEETGLIHEIGDWVFQQSAQ 970 Query: 482 QVAKWRD-KGINLRVAVNISARQLADQTIF-TALKQVLQELNFEYCPIDVELTESCLIEN 539 V + G + +V+VN S Q D+T + L L I VE+TE L+ Sbjct: 971 LVKQCIPIVGDDFQVSVNKSPVQFRDRTQAHQDWMEYLSGLGLSGHNIVVEITEGLLLNA 1030 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 D + F G QV +DDFGTGYSSLS L +F ID +K+DQ FVR++ + +L Sbjct: 1031 DSGISDKLLHFRDAGMQVAIDDFGTGYSSLSYLKKFDIDYLKIDQSFVRNLSGEGEDLAL 1090 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 AI +A L+L+VIAEGVE+ + L + G + QG+LF++P+PA F + +R Sbjct: 1091 CEAIATMAHKLDLRVIAEGVETTAQRDLLAQIGCDYGQGYLFSRPVPAEEFMQLLER 1147 Score = 80.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 76/238 (31%), Gaps = 13/238 (5%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + + + P ++D S PD QL A +R T +S Sbjct: 370 VNPRWAEMLGYTPDELEPCTAD----SCRALCHPDDLEQLVQALEAHLRGETDYFASESR 425 Query: 67 SLTVDESDLSVHLVGR--KINKREWAGNASAWHDTPAVARDLSHGLSFA----EQVVSEA 120 + + V GR + + + A S + L A + + +A Sbjct: 426 RRHKNGHWIWVADRGRVTRRSPQGEALTMSGTRLEITKLKLAETTLKQAVEQQKMFIQQA 485 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 + + D + ++ G ++ ++G + + + R+ ++ Sbjct: 486 PICVAMFDRDMRYLACSNQWQEEFGHQQGSLLGLNHYDVHP--DIPEKWRQAHQRALAGE 543 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 E E GQ L+ + +I S +I+ ++A+E L LA+ Sbjct: 544 RLEEEEDLWIRADGQHLWTRWMITPWMDDSQTIQGIIISSENISARKQAEEEL-RLAH 600 Score = 58.4 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 16/175 (9%), Positives = 43/175 (24%), Gaps = 4/175 (2%) Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 + L + + +L++ +Q++ + Sbjct: 299 PVLLPYSRYIAPALGLLSLVGAIVLLWILLLRRSVKTKTAELANQHQRLQQIIDGTAAGT 358 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDV---IGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 D R N + G ++ S L + + Sbjct: 359 WEWDIRSGDCIVNPRWAEMLGYTPDELEPCTADSCRALCHPDDLEQLVQALEAHLRGETD 418 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVH-SGSGKNEIFLICSGTDITEERRAQERLRI 235 + E G +++ V + + + +IT+ + A+ L+ Sbjct: 419 YFASESRRRHKNGHWIWVADRGRVTRRSPQGEALTMSGTRLEITKLKLAETTLKQ 473 >UniRef50_Q2RPL3 Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPL3_RHORT Length = 855 Score = 844 bits (2181), Expect = 0.0, Method: Composition-based stats. Identities = 204/655 (31%), Positives = 329/655 (50%), Gaps = 14/655 (2%) Query: 7 STTLYNFLGSH-NPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + + +P + +D+ + T+ +L E + Sbjct: 189 VNPALARIYGYASPAELIAHFTDIASQLYVDGTKRGEFQRLMRETGEVRDFTAEVW---- 244 Query: 66 MSLTVDESDLSVHLVGRKIN-KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 D + + R + + R + +V + I Sbjct: 245 ---RCDGHTIWITENARCVRGPDNEVLYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGI 301 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 V+L+ ++ N E TGL D+ G+ +LF S + Sbjct: 302 VLLERDLTVRTVNPAFEAMTGLLRQDMEGR-PARLFASGLHENDFLATVAAEVDRAGLWR 360 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W +G + + TDIT+ +R +E +R AN D +T Sbjct: 361 GEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTH 420 Query: 245 LPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR+ + D ++ A++ A +V V++LDLD FK++ND+YGH GD++L+ + + + Sbjct: 421 LPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRN 480 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIA 361 C+ + R GGDEF+V+ SN A +A +IL L PF IG EV+ SVGI Sbjct: 481 CVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGIT 540 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 P+HG + ++R+AD AMY AK+GG ++ +FTP+M +R L ++++LR AL D+ Sbjct: 541 YFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDE 600 Query: 422 LVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 +H+QPK+ + EAL+RW+ PE+GLI P DFI AEESGLI+P+GRW + + Sbjct: 601 FELHFQPKVRADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACD 660 Query: 482 QVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 +V WR +G+ + V+VN+S RQ DQT+ ++Q+L E E +D+E+TE+ + + Sbjct: 661 RVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDV 720 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 E A+ ++ LG + +DDFGTGYSSL+ L FPID +K+DQ FVRD+ ++V Sbjct: 721 EHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIV 780 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 I+A+A+ L V+AEGVE ++ FL QGFL+++P+P F + + Sbjct: 781 STIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLR 835 Score = 96.1 bits (239), Expect = 4e-18, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 63/223 (28%), Gaps = 12/223 (5%) Query: 23 LTESSDVLRFST-TETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVG 81 + E+ D L S T P L + I + + + V+ + Sbjct: 71 IGETIDTLIGSPLTSYLTPADALAVQKVVEGAIALHGGVPVRRIAHIRHISGSERVYSLR 130 Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLS----FAEQVVSEAHSAIVILDSRGNIQRFN 137 + L + A I G N Sbjct: 131 FSPLDNGPHPLLVVITRDMTAQVAAENALRAAEGKYRAIFENAVEGIYQSTPDGTYLDVN 190 Query: 138 RLCEDYTGL-KEHDVIGQ---SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 G ++I +L++ + +R R + E+W C Sbjct: 191 PALARIYGYASPAELIAHFTDIASQLYVDGTKRGEFQRLMRET-GEVRDFTAEVW--RCD 247 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 G +++ N G ++ + DIT +R++QE +R+L Sbjct: 248 GHTIWITENARCVRGPDNEVLYYEGTVEDITAQRQSQETMRLL 290 >UniRef50_B9LZ98 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZ98_GEOSF Length = 912 Score = 843 bits (2180), Expect = 0.0, Method: Composition-based stats. Identities = 201/672 (29%), Positives = 336/672 (50%), Gaps = 21/672 (3%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSA--------EQAAR 53 + R TL +F W L S ++ T + + A Sbjct: 237 RNSRRIETLSSFKHLKTTDWILAASYPIVEAYAPLKTNRIYFITVMAVGTSVTLLFVWFL 296 Query: 54 IREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA 113 ++ +T S + + +H + K E +A++ + L + Sbjct: 297 MQRLTSPLSLITRHVEAIPDKSGLHNLINLERKDELGTLINAFNSMILSLDQHQNALRES 356 Query: 114 EQVV----SEAHSAI-VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 E A+ + +I DS ++ N+ + G +++ ++ + Sbjct: 357 ESNFRALADNANDGLQIITDSS-HLAYVNKRAAEIVGYSVEEMLLTTIETIIHPDHLQMI 415 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 R + + E+ + G + + GK + DIT+ ++ Sbjct: 416 IERKAKTDAGEFVPKQFEIMLAHRNGSCVPVEVTTARTIWQGKQVE--LAIVRDITDRKK 473 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGH 286 A++ ++ LA D++TGLPNR+ +QD + I A KV +++LDLD FK +ND GH Sbjct: 474 AEDEIQQLAYYDTLTGLPNRSLLQDRLGQGIVQAVRDNRKVAIMFLDLDRFKSINDTLGH 533 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPF 345 + GD LL V+ + C+ +AR GGDEF+++ S L +A +IL + P Sbjct: 534 VAGDSLLATVAERLTECVRETDTVARIGGDEFVIIISAIEHAEDLNKIAEKILAAISKPL 593 Query: 346 RIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 + E++ + S+GIA+ PE G+D ++++AD AMY AK+ G+ F F+ EMN + E Sbjct: 594 VLNDQEIFITASIGIAIYPEDGTDVQGLLKNADLAMYKAKDQGKNAFQYFSREMNVQALE 653 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 +L L+ +LR+ALE ++ VI YQP++ G + +EAL+RWQ P+ GL+PP FI AEE Sbjct: 654 HLILENSLRRALERNEFVIFYQPQMDLKSGRLVGMEALIRWQHPDLGLLPPSRFIPMAEE 713 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFE 523 +GLI+P+G W + + W D G LRVAVN+ Q + ++ VL++ Sbjct: 714 TGLILPIGEWALQTACAKNRAWMDAGFMPLRVAVNLCGIQFRQKKFIELIEAVLKKTGLA 773 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 +++ELTES L+ E + +V+ + ++G + +DDFGTGYSSLS L FPI+ +K+D Sbjct: 774 PSQLELELTESMLMSKAEESTTVLHKLKEMGVSLAIDDFGTGYSSLSYLKNFPINRVKID 833 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 + F+RD+ P ++V AI+A+A LNL+V AEGVE+ + FL+ NE QG+L + Sbjct: 834 RSFIRDVPNNPDDTAIVSAIIAMAHNLNLKVTAEGVENHSQLEFLSTRNCNEIQGYLLSS 893 Query: 644 PMPAVAFERWYK 655 P+P F R+ + Sbjct: 894 PLPEAEFTRFLR 905 >UniRef50_A7K0U5 Sensory box/GGDEF family protein n=14 Tax=Vibrio RepID=A7K0U5_VIBSE Length = 815 Score = 843 bits (2179), Expect = 0.0, Method: Composition-based stats. Identities = 180/640 (28%), Positives = 314/640 (49%), Gaps = 17/640 (2%) Query: 21 WRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLV 80 + + L +R + + T+ + + + + + Sbjct: 185 EIIGKDDFALF-------SHERAEKFIEADNLVVATGTLNIVEECRQIDENNNPTWLETI 237 Query: 81 GRKINKREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRL 139 + + + + LS A ++ + + +VI D NI N Sbjct: 238 KSPVRDNDGNLIGILGMTRNITRRKMVETQLSLASKIFNNSQEGMVITDRNANIIDVNTA 297 Query: 140 CEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFL 199 TG + +VIG++ L + + ++ E G Sbjct: 298 FTQITGYRSEEVIGKNPRILRS-GHHDQGFYKQLWHQLETKGQWKGEFINRKKDGSIYPQ 356 Query: 200 FRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAI 259 + I IC DI+ + +E+L+ +A D +T LPNR + L++ I Sbjct: 357 LATISAVMDDKNHLINYICVFEDISVRKAHEEKLQRMAFYDPLTNLPNRTHLLSLLEQHI 416 Query: 260 NHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDE 317 N+ ++LD+D+FK +ND+ GH GDQLL +++ + L + +AR GGDE Sbjct: 417 ETGHKNQQTFATLFLDIDHFKHINDSMGHFCGDQLLSKLAIRLQDILHLNAHVARIGGDE 476 Query: 318 FLVLASNTSQSAL--EAMASRILTRLRLPFRIGLIE-VYTSCSVGIALSPEHGSDSTAII 374 F+++ + E + IL+ + PF + + + S S+GIAL P G DS ++ Sbjct: 477 FVIILPDVHSDVALLETVGD-ILSVFQQPFDLANHDSLRVSTSIGIALYPRDGQDSETLL 535 Query: 375 RHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG 434 ++ADTAMY AK+ GR + ++P++ + ++ + + L +A+E QL + +QP+ Sbjct: 536 KNADTAMYLAKKNGRNGYAFYSPDLTDKSVSHVRIQSALHQAIEKQQLRLEFQPQYNLEQ 595 Query: 435 E-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL 493 + +E L+RWQ PE GL+PP DFI AE++GLI +G WV+L +Q W ++G+ Sbjct: 596 HAIVGVETLLRWQHPEFGLVPPADFIPIAEKTGLIQSIGEWVLLHACQQGNAWLEQGVEF 655 Query: 494 -RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQ 552 R+AVN+SA QL L +L + F +D+E+TES L+ + + A++ + Q + Sbjct: 656 GRIAVNVSALQLQQSNFIQRLSDILNQTGFPAQRLDLEITESFLLIDPQQAIASLNQLRE 715 Query: 553 LGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNL 612 LG ++ LDDFGTGYSSLS L PI+ +K+D+ FV D+ S ++V AI+A+ + L+L Sbjct: 716 LGIEISLDDFGTGYSSLSYLKGLPINKLKIDRSFVSDVPSNSDSNAIVNAIIAMGKTLSL 775 Query: 613 QVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 +V+AEG+E+ ++ +L + G QG+LF++P+ A R Sbjct: 776 KVVAEGIETQEQADYLFEKGCVYGQGYLFSRPVSAEKLFR 815 Score = 60.3 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 2/171 (1%) Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHG--LSFAEQVVSEAHS 122 +++LT + ++V + + S+ + + L ++ + Sbjct: 98 VLALTHPDDQITVVSAWLSALVGRMSFDVSSHYQQERTRHQTAATTPLPTLQEFIDCLED 157 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 I I G NR E+ ++IG+ F LF R +N V Sbjct: 158 HIWIKGMDGLYSMTNRSVENAWQKTNSEIIGKDDFALFSHERAEKFIEADNLVVATGTLN 217 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 E +L K + N I ++ +IT + + +L Sbjct: 218 IVEECRQIDENNNPTWLETIKSPVRDNDGNLIGILGMTRNITRRKMVETQL 268 >UniRef50_B2JCW5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=Bacteria RepID=B2JCW5_BURP8 Length = 1040 Score = 843 bits (2179), Expect = 0.0, Method: Composition-based stats. Identities = 218/647 (33%), Positives = 330/647 (51%), Gaps = 20/647 (3%) Query: 32 FSTTETTEPDRTLQLS----AEQAARIREMTVITSSLMMSLTVDESDLSVHL------VG 81 + E R + AE R +++ M+ D VH + Sbjct: 388 LAYPEQVIGKRDEDMPWRAFAEALGRQDTDVMLSGVPKMNYETDLVIDGVHRTTVTSKLP 447 Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR---GNIQRFNR 138 + G ++ D + L + + + +AI+I + I+ N Sbjct: 448 FTDSDGRVIGVLGSYTD-ITERKRADLALRLQSRALDASVNAILITEPSKEGNLIEYVNP 506 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF 198 + TG +VIGQ L R+ R + L G + Sbjct: 507 AFKRITGYDPQEVIGQDCRLLQRDDRDQEGI-AAIRQALAANREVSAVLRNYRKDGALFW 565 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 + I D+T R QE+L AN DS+T LPNRN ++D + HA Sbjct: 566 NQLYIAPVPDADGQTTHHIAVINDVTALIRYQEQLEYQANYDSLTRLPNRNLLRDRLQHA 625 Query: 259 INHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGD 316 + A + V VV++DLD FK VND+ GH GD+LL V+ + C +AR GGD Sbjct: 626 LIVAQRHHKGVAVVFIDLDGFKNVNDSLGHSVGDRLLSVVADRLARCARASDTVARHGGD 685 Query: 317 EFLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIR 375 EF+++ ++ + +L A R+ + P + E+Y CS+G +L P+ G D+ +++ Sbjct: 686 EFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGDDAETLMK 745 Query: 376 HADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RG 434 AD AMY AK+ GR F + PEMN L L+ LR+AL +++ ++HYQP++ G Sbjct: 746 KADLAMYRAKDMGRNTFQFYQPEMNVSAGARLNLERRLRRALRDNEFLLHYQPQVDIETG 805 Query: 435 EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL- 493 +V +EALVRW PE GLIPP FI AEESGLI PL WV+ + RQ W+D+G+ Sbjct: 806 QVVGMEALVRWHDPEVGLIPPSQFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPPA 865 Query: 494 RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQL 553 RV+VN+SARQ + I + QVL+E + +++ELTES ++ N E A+S++ + L Sbjct: 866 RVSVNLSARQFQQRDIAKLVMQVLEETGLDPQYLELELTESTIMRNAEEAVSMLNELHAL 925 Query: 554 GAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQ 613 G + +DDFGTGYSSLS L RFP+D +K+D+ FV DI + +++ AI+A+A +LNLQ Sbjct: 926 GIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGESSDDETITSAIIALAHSLNLQ 985 Query: 614 VIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 VIAEGVE++ + FL + +E QG+ FAKP+P A +R + Sbjct: 986 VIAEGVETSTQLDFLKERACDEMQGYFFAKPLPHHAIPGMLQRGSQS 1032 Score = 70.7 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 66/224 (29%), Gaps = 4/224 (1%) Query: 15 GSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESD 74 ++ L + +R +E + LQ S R M + + +D Sbjct: 259 YGYSESEFLAMTVRAIR-PHSEVARLETHLQRSDVTPGGPRTMAGVWHHRRKDGSQISAD 317 Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQ 134 +S H + + A + + E V+ I D Sbjct: 318 ISYHAMTFMGRPALFV-LADDVTEQINAEAEAQRSNQMLETVIDNIPQRIFWKDKELRYL 376 Query: 135 RFNRLCEDYTGLK-EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 N GL VIG+ + A R++ V E Sbjct: 377 GCNMAFARDAGLAYPEQVIGKRDEDMPWRAFAEALGRQDTDVMLSGVPKMNYE-TDLVID 435 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 G +K + S I ++ S TDITE +RA LR+ + Sbjct: 436 GVHRTTVTSKLPFTDSDGRVIGVLGSYTDITERKRADLALRLQS 479 Score = 65.3 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 56/221 (25%), Gaps = 16/221 (7%) Query: 18 NPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSV 77 Y RL D L + E L A A +R+ L++++ L Sbjct: 143 QTYTRLGMEVDRLE-AHMEQLRAQEDRALKAALDASMRDSRYAMLFLVVTMLAGSGLLIY 201 Query: 78 HLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG-NIQRF 136 R+ RE A H + + + + I D Sbjct: 202 TFGARENVAREKLRVARTLHRSDE----------RFRGLFEQHPVPMYIFDRDTLRFLAV 251 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE--VELWIPTCKG 194 N G E + + +V + A R G G Sbjct: 252 NAAAVQQYGYSESEFLAMTVRAIRPHSEVARLETHLQRSDVTPGGPRTMAGVWHHRRKDG 311 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 ++ + + + D+TE+ A+ + Sbjct: 312 SQISADISYHAMT-FMGRPALFV-LADDVTEQINAEAEAQR 350 >UniRef50_Q47A14 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47A14_DECAR Length = 827 Score = 843 bits (2178), Expect = 0.0, Method: Composition-based stats. Identities = 182/593 (30%), Positives = 311/593 (52%), Gaps = 9/593 (1%) Query: 71 DESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR 130 + + + + + G + + D + R + A++V S + I+ D + Sbjct: 234 ERTRPNGKTLEVRGVPLAEGGFVTVYTD-ISERRASAEREQLAQKVYSHTPAGIIFTDDQ 292 Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIP 190 I N + TG + ++IGQ+VF L + S+++ + ++ EL + Sbjct: 293 HRILSINPATTEMTGYEPFELIGQTVFGLIS--LDEGISQKDFQEQISMRGSWSSELEVT 350 Query: 191 TCKGQRLFLFRNKFVHSGSG-KNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRN 249 G + DITE ++A++R+R +A D++TGLPNR Sbjct: 351 QKNGSNFPAGARINRVDDPQSGLPAHYVWILADITERKQAEDRMRHIAQHDALTGLPNRL 410 Query: 250 AMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHD 307 A+ + + A + V V+++DLD FK +ND GH GD++LR+V+ + + L Sbjct: 411 ALLMRLAQLLPEARRHGWTVAVMFIDLDRFKIINDTLGHQVGDEMLREVACRLSNLLRET 470 Query: 308 QVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEH 366 +AR GGDEF+++ + S ++ +I++ L E++TS S+GI++ P+ Sbjct: 471 DFVARLGGDEFVIILPSISSPADAAIVSGKIISALSTAIEAEGHELHTSPSIGISIFPDD 530 Query: 367 GSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHY 426 G D ++++ADTAMY AK GR + F +MN+ E L ++ LR A+ ++L + + Sbjct: 531 GPDGDIVLKNADTAMYHAKAAGRNNYQFFAADMNRTAAERLNIERKLRHAIARNELSLVF 590 Query: 427 QPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAK 485 QP+ +EAL+RW P G+I P FI AEE+G+IV +G WV+ ++A+ Sbjct: 591 QPQFRAEDTTPTGVEALLRWHHPTDGMISPARFIPVAEETGMIVEIGDWVLATACHEMAR 650 Query: 486 WRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELAL 544 W + G+ LR+AVN+SARQL + + L +++E+TES ++EN + A+ Sbjct: 651 WINAGLKPLRIAVNVSARQLRRRDFCETVANALTTSGLPAELLELEITESSVMENPQEAI 710 Query: 545 SVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIV 604 ++++ ++G + +DDFGTGYSSL+ L FPID +K+D+ FV DI +++ + Sbjct: 711 HILERLGRMGVTLAIDDFGTGYSSLAYLKLFPIDHLKIDRSFVADIEHDLNDRAIAFGTI 770 Query: 605 AVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 A+A +L L VIAEGVE+ + L NG +E QGFLF+KP+ A + Sbjct: 771 ALAHSLGLNVIAEGVETEDQHELLRANGCDEVQGFLFSKPLTGAAAFAFLHAR 823 Score = 53.4 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 45/166 (27%), Gaps = 26/166 (15%) Query: 86 KREWAGNASAWHDTPAVARDLSHGLS----FAEQVVSEAHSAIVILDSRGNIQRFNRLCE 141 ++ G + + D + L + V+ SA+ + DS GN+ FN Sbjct: 122 DQQLVGFITTYTD-ITDRKAAETALRTQHNQLQTVIESIPSAVSLFDSAGNLVLFNTAFP 180 Query: 142 DYTGLKEHDVI-GQSVFKLFM---------SRREAAASRRNNRVFFRSGNAYEVELWIPT 191 + G S+ LF + Y Sbjct: 181 RLLDVPAELAKPGVSMETLFRFNAMRGEYGPGDPEKIVATLMERAKNPSHHY---FERTR 237 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 G+ + + TDI+E R + ER LA Sbjct: 238 PNGKT----LEVRGVPLAEG---GFVTVYTDISERRASAER-EQLA 275 Score = 47.6 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 20/141 (14%) Query: 108 HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI-GQSVFKLFM----- 161 L++ + VVS I + D + ++ +N+ + L V G +L Sbjct: 16 RQLAYLQAVVSNMPQGISVFDEQLRLRVWNQGFINVLNLPPEIVYEGVHFSELVRVPAQR 75 Query: 162 ---SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF---RNKFVHSGSGKNEIF 215 E A A+ E G + + + Sbjct: 76 GEYGPGEPEAHVERITALANKFEAHSFE--RTRPNGNTHLVQGEPLFI------DQQLVG 127 Query: 216 LICSGTDITEERRAQERLRIL 236 I + TDIT+ + A+ LR Sbjct: 128 FITTYTDITDRKAAETALRTQ 148 >UniRef50_C6XCZ6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XCZ6_METSD Length = 869 Score = 843 bits (2178), Expect = 0.0, Method: Composition-based stats. Identities = 193/621 (31%), Positives = 307/621 (49%), Gaps = 10/621 (1%) Query: 44 LQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWH---DTP 100 + + A I++ + L + + V G Sbjct: 249 AESREKIEAAIQQAIDHGKPYDLELELVTARGIRKWVRTVCTPHIIDGRVLKLQGSFQDI 308 Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 + + + A V + AI+++D+ I N + TG +V+G++ L Sbjct: 309 SDRKVAEDKMRLATLVFENSSEAIMVVDAESQILSVNPAFTEMTGYTAQEVVGKTPKILA 368 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 +++ S ++ E+W G+ + I + Sbjct: 369 SGKQDRK-FYEEMWHLLDSNGKWQGEVWNRRKNGESYAEWLTIDTIYNEHGEVIRRVALF 427 Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFK 278 +DIT+ ++ QE + AN D +TGLPNR + D ++ I AD N + V++LDLD FK Sbjct: 428 SDITKNKQNQEVIWRQANFDQLTGLPNRRMLHDRLNQEILKADRNHQMLAVLFLDLDRFK 487 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRI 337 +VND YGHL GDQLL++ + +L + +AR GGDEF+V+ S + +A I Sbjct: 488 EVNDTYGHLMGDQLLQESAHRLLHSVRECDTVARLGGDEFVVILSGLQDKDVVQDIAQSI 547 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTP 397 L + PF++ + S S+GI + PE G+ + ++AD AMY AK GR ++ FT Sbjct: 548 LKKFDTPFQLDNDLTHVSVSIGITIYPEDGNAGEVLFKNADQAMYVAKNNGRNRYSYFTA 607 Query: 398 EMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPL 456 M + L +L AL Q ++YQP + G+V EAL+RWQ P RG+IPP Sbjct: 608 SMQAHAQNRMRLSNDLHLALPGQQFELYYQPIVELATGQVHKAEALLRWQHPTRGMIPPD 667 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQ-TIFTALK 514 +FI AEE+GLIV +G WV + RQV + + + ++++N S Q ++ A Sbjct: 668 NFIPLAEETGLIVDIGNWVFYEAARQVKRLQSLHHASFQISINKSPVQFHNETHGHEAWI 727 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 L + I VE+TE L+ DE + + F G QV LDDFGTGYSSLS L + Sbjct: 728 SFLLMNDLPRQSIVVEITEGLLMHTDESISAQLLGFRDAGVQVALDDFGTGYSSLSYLKK 787 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 F ID +K+D++FVR++ + +L AIV +A L+++VIAEG+E+ ++ L + G + Sbjct: 788 FDIDYLKIDRIFVRNLSRNSSDMALCEAIVMMAHKLDIKVIAEGIETEEQRELLQQIGCD 847 Query: 635 ERQGFLFAKPMPAVAFERWYK 655 QG+LF+ P+PA AFE + + Sbjct: 848 FGQGYLFSPPLPAPAFEAYLR 868 Score = 61.1 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 44/159 (27%), Gaps = 30/159 (18%) Query: 108 HGLSFAEQVVS----EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 H + A+ +I++ D +G + N G + +L Sbjct: 68 HRQQLLASRYNSLTVHANDSILLFDHQGKLVDANDRALRMYGYTRDQMQHIHARQLLPDA 127 Query: 164 REAAASRRNNRVFFRSGNAYEV---ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 + R F + + E G + + + ++ Sbjct: 128 ------ASDWRSCFLAEAQHNGIIFESEHKHADGSTFSVEVSACLLK--IGGSDYIQAIV 179 Query: 221 TDITEE-------RRAQERLRIL---AN-----TDSITG 244 DITE R +++ L + A+ D TG Sbjct: 180 RDITERLRVVEKLRESEQLLAHMSAIAHIGGWEFDVETG 218 >UniRef50_B8GLY5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLY5_THISH Length = 1082 Score = 842 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 201/589 (34%), Positives = 307/589 (52%), Gaps = 6/589 (1%) Query: 71 DESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR 130 D L V R I + + + L QV A ++I D+R Sbjct: 483 DGRVLVVDYAFRPILEGGQVRGGVFSCRDITGRKRIEESLRLHAQVFDTATEGVMIADAR 542 Query: 131 GNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIP 190 G I NR E TG +V+G++ L S R+ A R + + E+W Sbjct: 543 GRILSVNRAFEQVTGYSAEEVVGRNPSIL-SSGRQDKAFYRRMWDTIKGEGIWSGEIWNR 601 Query: 191 TCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNA 250 G+ + +G + +DIT ++R+++ + LAN D +TGL NRN Sbjct: 602 RKDGEIYPEWLTISSIAGPNGEASHFVAVFSDITAQKRSEQEIDFLANHDPLTGLANRNL 661 Query: 251 MQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQ 308 +D + HAI+ A N VG++ +DLD F+ +ND GH GD LLR+ + C+ Sbjct: 662 FEDRLAHAISMAGRNGQHVGLLLVDLDRFRLINDGMGHGPGDALLRETGRRLGHCVRDSD 721 Query: 309 VLARPGGDEFLVLASNTSQSALEAM-ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHG 367 +AR GGDEF ++ + +A M A RIL +R P R+G E++ + S+GIA+ P G Sbjct: 722 TVARLGGDEFGIILEGLADAADAGMQAERILEAMRAPLRLGGQELFCTVSIGIAVFPADG 781 Query: 368 SDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQ 427 +D+ ++RHADTAM AK GR F +T + + VF L ++T LR ALE D+L +HYQ Sbjct: 782 TDAATLLRHADTAMALAKREGRNNFQFYTHALTEAVFSRLNIETGLRHALERDELRLHYQ 841 Query: 428 PKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW 486 P + G + ++E+L+RWQ PERGL+ P FI AE+S LI+ LGRW ++ QV W Sbjct: 842 PILDAASGRIAAMESLMRWQHPERGLVSPGVFIPVAEQSDLILALGRWALVSACAQVRAW 901 Query: 487 RDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALS 545 D G+ + V+VNI A + V++E + + +ELTES L+E LA Sbjct: 902 SDAGLEPVPVSVNIPACHFRQPGFVEEVLGVVRETGVQPQSLIIELTESALMEPVSLAEE 961 Query: 546 VIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVA 605 I++ G V +DDFGTGYSSL L RF ++ +K+D+ FV + ++++ A++ Sbjct: 962 RIRRLRDTGVVVAIDDFGTGYSSLGYLQRFHVNYLKVDRSFVSGLPGDENARAITEAVIG 1021 Query: 606 VAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 V+ +L LQV+AEGVE+ + L G ++ QG+L +P+ A Sbjct: 1022 VSHSLGLQVVAEGVETQAQLDHLRATGCDKVQGYLTGRPVTAEVAATLL 1070 Score = 71.8 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 30/194 (15%), Positives = 55/194 (28%), Gaps = 15/194 (7%) Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGL----SFAEQV 116 L L L + ++ + R + QV Sbjct: 344 GQRLNRRLAEAGRLLQSRV---EMRTEHLNVANRSLQREVEQRRQAEAEVLAQSRRQAQV 400 Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF-KLFMSRREAAASRRNNRV 175 + AI LD+ ++ N E G + GQ + L + + ++ + Sbjct: 401 LEAVDEAIFGLDADCRVEFANPAAEALAGCSIGQMRGQRLSGVLQIRDDQGRSAWEPDGD 460 Query: 176 FFRSGN-----AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 + + G+ L + G + S DIT +R + Sbjct: 461 CLAEDPMPVSIRRAFDQTLYHRDGRVLVVDYAFRPIL-EGGQVRGGVFSCRDITGRKRIE 519 Query: 231 ERLRILAN-TDSIT 243 E LR+ A D+ T Sbjct: 520 ESLRLHAQVFDTAT 533 >UniRef50_C7RVM5 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RVM5_9PROT Length = 708 Score = 842 bits (2176), Expect = 0.0, Method: Composition-based stats. Identities = 189/648 (29%), Positives = 313/648 (48%), Gaps = 17/648 (2%) Query: 25 ESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSL---MMSLTVDESDLSVHLVG 81 E+ L+ P L ++ + R + + + +++ + +S + + Sbjct: 65 ETCRRLKADPRSQAIPVFFLTALSDGESEARGLALGAADYITKPINVAIARQRIS-NFLE 123 Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCE 141 R+ ++E A LS A + + +VI D +G I R N+ Sbjct: 124 REGLRKEVEAQRDRLATLVAELERAEGELSIAAVAF-ASQNGMVITDPKGVILRVNQSFT 182 Query: 142 DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 TG + IG++ L R + + ++ E+W GQ Sbjct: 183 RLTGYSAAEAIGRTPAVLKSGRHDDP-FYQRMWNSLVEKGYWQGEIWNKRKSGQIYAELL 241 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH 261 SG + S +DITE+++A+ + LA D++T LPNR +QD + A+ Sbjct: 242 TITAIVASGGITTHYVASFSDITEDKQAEAEIHRLAYYDALTRLPNRRLLQDRLGQALAA 301 Query: 262 ADNNKV--GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL 319 A + + + ++ LDNFK +ND GH GD LL +V+ + + + +AR GGDEF+ Sbjct: 302 AARHGLYGALFFIGLDNFKTLNDTRGHDVGDLLLVEVAQCLRAQVREGDTVARLGGDEFV 361 Query: 320 VLASNTS--QSALEAMA----SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAI 373 +L S A+A ++ PF + E S+G++L + Sbjct: 362 LLLDGVSGNADEAAAVAKEVGDKLREATSRPFSLDGQEYRCKLSIGVSLF-AALDTVEEL 420 Query: 374 IRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR 433 + AD A+Y AK GR + F P M + L+++L +AL DQL +HYQP+I Sbjct: 421 FKRADLALYQAKNAGRDRLRFFDPAMQAAMDLRGALESDLHQALALDQLRLHYQPQIDTA 480 Query: 434 GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG--I 491 G V +EAL+RW P+RGL+ P +F+ AE +GLI+P+GRW++ + W Sbjct: 481 GRVIGVEALLRWWHPQRGLVSPNEFVPLAESTGLILPIGRWILETSCVLIKNWESDACTR 540 Query: 492 NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFS 551 +L+VAVN+SARQ +K+ L+ + +ELTES L++N E ++ + Sbjct: 541 SLQVAVNVSARQFRQADFVEQVKRSLKASGANPARLKLELTESVLLKNVEDTIAKMLAIK 600 Query: 552 QLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALN 611 +LG LDDFGTGYSSLS LA+ P+D +K+DQ FVR + +++ R I+ + + L+ Sbjct: 601 RLGVAFSLDDFGTGYSSLSYLAQLPLDQLKIDQSFVRKLPGARKEETIARTIITMGRELD 660 Query: 612 LQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 + VIAEGVES + FL +G + QG+LF++P+P + + + Sbjct: 661 MNVIAEGVESEAQRQFLEAHGCHAFQGYLFSRPLPVEHLTVFLQEADR 708 >UniRef50_A4U4T7 Two-component sensory box protein n=3 Tax=Magnetospirillum RepID=A4U4T7_9PROT Length = 828 Score = 841 bits (2175), Expect = 0.0, Method: Composition-based stats. Identities = 186/655 (28%), Positives = 311/655 (47%), Gaps = 14/655 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 E+ + + + E + T + L AE R+ +T Sbjct: 167 EANPAFLSMVGYGEVELRGEKFRDI----THPDDIGLNDTLRAEVLDGSRDGFQLTKRY- 221 Query: 66 MSLTVDESDLSVHLVGRKINKREWAG-NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 + D + L + + + + + L + A V + + Sbjct: 222 --IAKDGRIIWAKLTCTVMREADGQQPFTVTVVEDITERKRLEDNMRLAATVFENSGDGL 279 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 + D+ I N TG +V+G++ L R + + V R G ++ Sbjct: 280 FVTDAENRIIHVNPAFTRITGFTADEVLGRNPRLLASGRHDHDFFIQLWTVLLRDGK-WQ 338 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ ++N V + + +DIT ++ +ERL AN D +T Sbjct: 339 GEIWDRRKDGEMFAGWQNIAVVRDTDGKVQNFVAVISDITTRKQVEERLSYAANHDPLTR 398 Query: 245 LPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR Q+ + AI A N V ++++DLD FK+VND GHL GD LL+ V+ + S Sbjct: 399 LPNRTLFQERLTRAIARASRNHNLVALLFIDLDRFKQVNDTMGHLAGDMLLQQVAERLSS 458 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 C+ +AR GDEF ++ + + ++L L+ P + E + S S+G++ Sbjct: 459 CIRQGDTVARLSGDEFTIILEDVQDPRDAAVVGHKVLRLLQEPVALTGGEAHISSSIGVS 518 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 L P D +++ AD AMY AK GR + +N FE L L+ LR A++ Q Sbjct: 519 LYPTDAGDPQTLLKLADAAMYRAKHLGRNSCQFHSEAVNAEAFERLALENALRGAVDQGQ 578 Query: 422 LVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 ++HYQP G ++EAL+RW+ PE G++ P F++ AEE+G+IVP+GRWV Sbjct: 579 FLLHYQPIFDVKSGRAVAVEALLRWRHPEVGVVAPNQFLALAEETGMIVPIGRWVFDQAC 638 Query: 481 RQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 RQ WRD G +LR+ +N+S RQL + + L+ + +E+ E+C+I+ Sbjct: 639 RQAKLWRDAGHVDLRLHINLSPRQLRQPDLIEMVAAALEVSQLPPQALVLEVMETCVIDK 698 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 ++ +F+ LG + +D+FG+GYSS + L R P+ +K+ Q FVR++ + Sbjct: 699 AFDPSALFARFAALGVGLAIDEFGSGYSSFAFLRRLPVTILKVAQSFVRNLSSSEDESEI 758 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 V AIVA+A+ L++ V+A G+E+ + FLT G ++ QGFL +KP+P + Sbjct: 759 VTAIVALARGLHMTVVAPGIENKAQLDFLTGFGCDKVQGFLLSKPLPGTEMTEFL 813 Score = 91.5 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 68/213 (31%) Query: 26 SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKIN 85 +L S ++ D +L A + T+ ++L +LV + + Sbjct: 58 DVVLLDLSLPDSFGMDTLDRLRAAHPLVPVVVLTGTNDEALALQALRQGAQDYLVKGQGD 117 Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 + A L + + A +V+ D+ G + N G Sbjct: 118 GNLVRRAIFYAIERSHAASALKRSEGRFRALFANAGLGVVLADAHGRMVEANPAFLSMVG 177 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 E ++ G+ + V S + +++ G+ ++ V Sbjct: 178 YGEVELRGEKFRDITHPDDIGLNDTLRAEVLDGSRDGFQLTKRYIAKDGRIIWAKLTCTV 237 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 + + F + DITE +R ++ +R+ A Sbjct: 238 MREADGQQPFTVTVVEDITERKRLEDNMRLAAT 270 >UniRef50_C7RN47 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN47_9PROT Length = 1542 Score = 841 bits (2174), Expect = 0.0, Method: Composition-based stats. Identities = 190/661 (28%), Positives = 315/661 (47%), Gaps = 15/661 (2%) Query: 5 RESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSL 64 + + + + ++ L + IR I Sbjct: 886 QFANPKFEQTFGFATGEVIGKTDLQLFPEAVSDL-------FRESELEAIRLRKGIEREE 938 Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 + L E V + G D + L A V A + Sbjct: 939 SLPLAAGERHFLVVRFPLFDDDGAITGLCFQATD-ITARKRAEEQLRLAALVFDRASEGV 997 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 ++ D+ I N TG +V+G++ L S R ++ Sbjct: 998 MVTDTEQRILTINDSFSTLTGYTRQEVVGKTPR-LLRSDRMPREFYAEMWDKVTRLGVWQ 1056 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ + + + + +DIT+ R +Q+R+ LA D +TG Sbjct: 1057 GEIWNRRKNGEPYLEWLSINTVKDKNGKVVNYVGMFSDITKVRESQQRIEYLATHDELTG 1116 Query: 245 LPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR D ++ A+ HA+ ++ VGVV++DLDNFK VND GH GD+LL+ ++ +L Sbjct: 1117 LPNRALFNDRLNLALAHAERSRESVGVVFIDLDNFKVVNDTLGHETGDKLLKQAAMRLLE 1176 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 C+ + +AR GGDEF+VL N + A R+LT L + G E + S S+G+++ Sbjct: 1177 CVRAEDTVARLGGDEFVVLLVNADRQQATLTAERLLTGLSTSYHFGEHECFISASIGLSM 1236 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 PE SD+ +++R+AD+AMY AK+ G+ F F+ ++ + + L L+T LR+A+EN +L Sbjct: 1237 FPEDASDANSLMRNADSAMYRAKDHGKNGFRFFSADLASQASKRLALETGLRRAIENGEL 1296 Query: 423 VIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 +HYQP++ V EALVRW+ +I P+ FI AE+S LI + WV+ + R Sbjct: 1297 FVHYQPQVRLECDTVVGAEALVRWRY-NGEVIDPVVFIPIAEQSHLIFAIDDWVLGEACR 1355 Query: 482 QVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Q+ +W G+ LR++VNISAR + L ++ + +E+TE L+ + Sbjct: 1356 QIIEWDRAGLPPLRISVNISARHFRKDGMAADLMDIVSAHGVSPQRLCIEITEGVLM-DV 1414 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 + A ++ + + G ++ +DDFGTG+SSLS L RFPI +K+ + FV I +++ Sbjct: 1415 DRAQRMLAELVESGLRISIDDFGTGFSSLSYLKRFPIHELKIARSFVDGISTDADDRAIA 1474 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 I+++A+ L + V+ EG+E + A L G + QGFL+A+P+ AF W + Sbjct: 1475 SVIISLARQLGMSVVGEGIERTGQHAELEAFGCHRGQGFLYAQPLAPDAFADWVLARTAK 1534 Query: 661 A 661 A Sbjct: 1535 A 1535 Score = 93.0 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 76/238 (31%), Gaps = 17/238 (7%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 +++ + L L + Q AR R++ Sbjct: 763 SLQRFNSAAARLFKLGAAQ-TGRHLRDLPLPPDMPDLLADVQHVIDTQNARDRQI----- 816 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPA---VARDLSHGLSFAEQVVSE 119 + + ++H+ + + AG + D + V R + V++ Sbjct: 817 -----VNANRRHYALHIAPLLRDTQRIAGVILLFADNTSLYEVERSARETQVRLQAVMNN 871 Query: 120 AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRS 179 + S + + D+ G Q N E G +VIG++ +LF Sbjct: 872 SVSLMAVKDAPGRYQFANPKFEQTFGFATGEVIGKTDLQLFPEAVSDLFRESELEAIRLR 931 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 E E +P G+R FL F L TDIT +RA+E+L LA Sbjct: 932 KGI-EREESLPLAAGERHFLVVR-FPLFDDDGAITGLCFQATDITARKRAEEQL-RLA 986 >UniRef50_A1K5K2 Conserved hypothetical signaling protein n=2 Tax=Proteobacteria RepID=A1K5K2_AZOSB Length = 1089 Score = 841 bits (2174), Expect = 0.0, Method: Composition-based stats. Identities = 216/656 (32%), Positives = 332/656 (50%), Gaps = 23/656 (3%) Query: 26 SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGR--- 82 + + S D ++ RI ++ + L D V + Sbjct: 428 PAGLAVRSGAPQVVHDIHRHPQLQRWRRIAAERGFKAAAALPLRSDGETYGVLCLVSVDP 487 Query: 83 KINKREWAGNASAWHDTPA----------VARDLSHGLSFAEQVVSEAHSAIVI--LD-- 128 + + + D A + L+ L + + E+ +AIVI D Sbjct: 488 QAFDADEVELLAELADDIAFGIRTLRARVEQQQLAATLELRNRAIEESTNAIVISHADRA 547 Query: 129 SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW 188 + I N TG +V+G++ L + + A R R R G V L Sbjct: 548 ADNPIIYVNPAFTVTTGYGADEVLGRNARFLIDNDWDQPAVER-LREAVREGGDARVTLR 606 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNR 248 GQ L+ + + I D+TE R + L A D++TGL NR Sbjct: 607 TYHKDGQLLWNEISLASIRDAQGEVSHFIAIFNDVTERVRYEAELEQQATHDALTGLANR 666 Query: 249 NAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEH 306 N + D + AI A + V V+ LDLD FK +ND+ GH GD LL++ + + + + Sbjct: 667 NLLNDRMQRAIIRAARDGHAVAVMLLDLDRFKLINDSLGHAAGDALLQETARRLSASVRR 726 Query: 307 DQVLARPGGDEFLVLASNTSQSALEAMAS-RILTRLRLPFRIGLIEVYTSCSVGIALSPE 365 +AR GGDEF+V+ S+ S A + ++L L P + E+ + S+G++L P Sbjct: 727 GDTVARLGGDEFMVVMSDMSAEDAAAALAAKVLESLAEPMLLNGREIVATGSIGVSLYPR 786 Query: 366 HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIH 425 G + +++HAD AMY AKE GR +F + PEMN+R+ E L L+ +LR+ALEND+L +H Sbjct: 787 DGEAAATLLKHADVAMYRAKELGRNRFQFYAPEMNERILERLELENSLRRALENDELELH 846 Query: 426 YQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 YQPK++ R G V EAL+RW+ P+ G++ P DFI AEE+GLIVP+G WV+ RQ+ Sbjct: 847 YQPKVSLRDGRVIGAEALIRWRHPQLGMVSPADFIPLAEETGLIVPIGEWVVDHACRQLR 906 Query: 485 KWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 W D G+ + VAVN+SARQ + + L + L + VE+TES ++ E Sbjct: 907 AWLDAGLPQISVAVNVSARQFQHEQLTHVLARALAAHRLPPGQLHVEVTESAVMCEPERT 966 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 + +++ +G ++ LDDFGTGY SL+ L RFPID+IK+D+ FV D+ ++ I Sbjct: 967 IFTLRELKNIGVRISLDDFGTGYCSLNYLKRFPIDSIKIDRCFVTDLATSAEDAAIALMI 1026 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 V++A +LN VIAEGVE+ + FL ++G +E QGFLF++P+PA F R + Sbjct: 1027 VSLAHSLNQTVIAEGVENEAQLDFLRRHGCDEMQGFLFSRPLPAAEFARLLAAGTR 1082 >UniRef50_A0KRF8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=12 Tax=Shewanella RepID=A0KRF8_SHESA Length = 1077 Score = 839 bits (2170), Expect = 0.0, Method: Composition-based stats. Identities = 200/610 (32%), Positives = 320/610 (52%), Gaps = 8/610 (1%) Query: 54 IREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA 113 IR V + + + +D +++ E A A A + + + +H LS A Sbjct: 452 IRSFMVKITKIANDMQQMAADPQLNINIDASGTDELARMAQAMNRMISERQKANHALSRA 511 Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN 173 V + + I++ D+ +I+ N TG +V G+S L S R Sbjct: 512 AAVFNYSAEGIMVTDADNHIELINPAFSQITGYSLEEVKGRSPSIL-SSNRHPHHYYTAM 570 Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 +E E+W GQ + V I I DI++ ++ ++ L Sbjct: 571 WEALHKEGKWEGEIWNKRKDGQVYPEYLAITVVRNEQGEIIQHIGLFMDISKRKQYEQDL 630 Query: 234 RILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQ 291 AN D++TGLPNR + + H I A + K+ ++ +DLD FK +ND GH GD Sbjct: 631 WYQANFDTLTGLPNRKLFNERLQHEIQLAQHDSRKLAILLIDLDQFKYINDVQGHATGDL 690 Query: 292 LLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLI 350 LL+DV+ + + + +AR GGDEF+++ + A+E MASRI+ L PF + Sbjct: 691 LLQDVAKRLENIAGKNDFVARIGGDEFVLILPRVTNEFAIEHMASRIIETLATPFNLNER 750 Query: 351 EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLD 410 E+ S S GI + PE G D +++ R+ + AMY AK+ GR F FT MNQ +F + L+ Sbjct: 751 EIQISASFGIGVYPEDGLDVSSLTRNTEMAMYQAKDAGRNNFKYFTSGMNQAMFARMELE 810 Query: 411 TNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIV 469 LR+A+ D+ + YQP + G++ S+EAL+RWQ P+ GLIPP FI+ AEE+GLI Sbjct: 811 QRLRRAVAQDEFTLFYQPIVDMKTGQICSVEALIRWQDPDLGLIPPDQFIAIAEETGLIE 870 Query: 470 PLGRWVILDVVRQVAKWRDKGINLRVAVNISARQL---ADQTIFTALKQVLQELNFEYCP 526 P+G WV+ + + +W+ G+NL VA+N+S+RQ L++ + Sbjct: 871 PMGEWVLNQAMHDLRQWQHMGLNLNVAINVSSRQCINTRGIGFDQVLQECFNRHHINPRN 930 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 + +E+TES L+ + LS ++ LG+Q+++DDFGTGYSSLS L +FPI IK+D+ F Sbjct: 931 VHIEITESMLMGDASHCLSTLESIRHLGSQIYIDDFGTGYSSLSYLKKFPISVIKIDRSF 990 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 V + + +LV+AIV + Q+L ++++AEG+E+ + FL G + QG+L +KP+P Sbjct: 991 VEHALENCSNANLVKAIVMMGQSLEMELVAEGIETEAQWQFLRDLGCHYAQGYLLSKPLP 1050 Query: 647 AVAFERWYKR 656 + Sbjct: 1051 FDEITPLLGQ 1060 >UniRef50_C6WZ79 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WZ79_METML Length = 1250 Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats. Identities = 190/670 (28%), Positives = 312/670 (46%), Gaps = 35/670 (5%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMS 67 Y L + P + + + E A++ I L+ Sbjct: 593 NKRYTELINCPPDAVMGRNPKLYYAHAEEY----------DALLAQVNSGHAINDKLIQL 642 Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS----- 122 + + + R ++ E W R L +E + ++ Sbjct: 643 IVEGKGPVWAMASYRPVH-YEGTAAILGWFYDVTDLRRAQDALLLSEALAKQSLEELKYQ 701 Query: 123 -------AIV-ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 AIV + D +G I N + +G +++GQ L + Sbjct: 702 KYALDKHAIVAVTDVKGRITYANDKFSEISGYSIEELLGQDHAILNSGYH-PKGYFKEMY 760 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 +G + E+ G ++ G I TDIT+ + A+++ Sbjct: 761 RTVANGQVWHDEICNRAKDGSLYWVDTTIAPFIGDDGKPQSYISIRTDITQRKAAEDKSN 820 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQL 292 LA D +T LPNR + D + HA+ A +++LDLD+FK +ND GH GD L Sbjct: 821 YLALYDPLTNLPNRRLLLDRLTHALASAMRTGRGGALLFLDLDHFKTLNDTLGHDVGDLL 880 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMAS------RILTRLRLPFR 346 L+ V+ + +C+ +AR GGDEF+V+ S+ +EA A +IL + P++ Sbjct: 881 LQQVAECLTACVREGDTVARLGGDEFVVILEGLSEQEVEAAAQAEVVGEKILNKFIEPYQ 940 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 E + + SVGI L ++ S +++ AD AMY AK+ GR F P+M + + Sbjct: 941 FKGYEYHITSSVGITLFGKNNLKSDELLKQADIAMYQAKKLGRNALSFFDPKMQEGIQAR 1000 Query: 407 LWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 + ++ LRKAL+ ++ + YQ ++ EAL+RW PERGLIPP +F+S AE+ G Sbjct: 1001 VDMEHELRKALDKNEFQLFYQMQVGLSDRAVGAEALIRWIHPERGLIPPNEFVSIAEDCG 1060 Query: 467 LIVPLGRWVILDVVRQVAKWR--DKGINLRVAVNISARQLADQTIFTALKQVLQELNFEY 524 +I+ +G WVI Q+ +W ++ +L ++VN+SA+Q + + Sbjct: 1061 MILSIGAWVIDTACAQLKRWEQSERTRSLTLSVNVSAKQFRQADFVEQVTTAIARHGINP 1120 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 + +ELTES L+++ E A++++ +G + LDDFGTGYSSL L P+ +K+D+ Sbjct: 1121 MLLKLELTESALLDHIEDAVAIMNALKDIGIRFSLDDFGTGYSSLQYLRLLPLYQLKIDR 1180 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 FVRDI +Q++VR I+A+A LNL VIAEGVE+ + L +G QG+LF++P Sbjct: 1181 SFVRDIASSIGNQAIVRTIIAMAHTLNLNVIAEGVETQVQQGILLDSGCMHYQGYLFSEP 1240 Query: 645 MPAVAFERWY 654 +P AFE Sbjct: 1241 VPIDAFEALL 1250 Score = 56.0 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 8/169 (4%) Query: 68 LTVDESDLSVHLVGRKI-----NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 L D S VH G N G + + S+ +++ Sbjct: 390 LLADGSVKWVHERGTSDYDAAGNPTYSRGTVQDVTERQNSEALIRKTESYLTNILNSVEE 449 Query: 123 AIVILDS-RGNIQRFNRLCEDYTGLKEHDVIGQ-SVFKLFMSRREAAASRRNNRVFFRSG 180 I + + N E GL + +I V+ + + A ++ + F Sbjct: 450 VIWTASAPDFRVNHVNAAIEKLCGLSQQALIDDIEVWINLIHPDDCAQAKLAMKAVFEQS 509 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 + +E I G ++ ++ V G L+C D+T +R A Sbjct: 510 SV-ALEYRIVLADGTVRWVSDSRHVVYGESGESAELVCVIHDVTAKRLA 557 Score = 43.7 bits (103), Expect = 0.023, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 69/233 (29%), Gaps = 12/233 (5%) Query: 4 VRESTTLYNFLGSHNPYWRLTE-SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 V L + + + + + + ++ EQ++ E ++ + Sbjct: 461 VNHVNAAIEKLCGLSQQALIDDIEVWINLIHPDDCAQAKLAMKAVFEQSSVALEYRIVLA 520 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 + D + + G E A Q++ + Sbjct: 521 DGTVRWVSDSRHV---VYGESGESAELVCVIHDVTAKRLAADADRESKERVIQMLETSPI 577 Query: 123 AIVILDSRG-NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 A+ I S G + N+ + V+G++ A SG+ Sbjct: 578 AVRIATSSGDKVLFANKRYTELINCPPDAVMGRNPKL----YYAHAEEYDALLAQVNSGH 633 Query: 182 AYEVELWIPTCKGQ-RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 A +L +G+ ++ + G ++ D+T+ RRAQ+ L Sbjct: 634 AINDKLIQLIVEGKGPVWAMASYRPVHYEG--TAAILGWFYDVTDLRRAQDAL 684 >UniRef50_Q21XK7 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21XK7_RHOFD Length = 716 Score = 838 bits (2167), Expect = 0.0, Method: Composition-based stats. Identities = 201/625 (32%), Positives = 316/625 (50%), Gaps = 13/625 (2%) Query: 49 EQAARIREMTVITSSLMMSLTVDESD----LSVHLVGRKINKREWAGNASAWHDTPAVAR 104 E R+R+ + ++ L+ D S+ +HL + + N + R Sbjct: 73 EVLRRMRDDPHTSDIPVILLSADASEQSEIAGLHLGANDYLVKPVSTNVLIVRVRNLIQR 132 Query: 105 DLSH-GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 + L A V + AI+I D I N TG + +V+ ++ L S Sbjct: 133 NADRIQLRLAAHVFEYSGEAIMITDRDNQIVDVNAAFTTLTGYHKSEVLSKNPKFL-SSG 191 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 R + R+G ++ E W G V + F + + D+ Sbjct: 192 RTTRKEYQAMWAAIRTGGFWQGEFWDRRKDGSVFPKMMTVSVVLDRAGDIDFYLANFVDV 251 Query: 224 TEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVN 281 + + + R+ LA+ D++TGLPNR +Q ++ +I A ++ VV+LDLD FK +N Sbjct: 252 SHYKETERRIEHLAHHDTLTGLPNRLHLQVFLEQSILIAKRMSEQLAVVFLDLDRFKTIN 311 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE-AMASRILTR 340 D GH GD LL V+ + + + ++AR GGDEF+++ ++ A+A +I Sbjct: 312 DTLGHPVGDDLLIQVADRLKTSVRQYDMVARLGGDEFVMILRGHDMPSVASAVAEKIRLH 371 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 L PF+IG + T+ S+GIAL P +G +++HADTAMY K G FC F+ +MN Sbjct: 372 LNQPFQIGQHTLRTATSIGIALYPGNGERMDDLMKHADTAMYFTKSEGGNGFCFFSSDMN 431 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFI 459 E L L+ L ALEN Q ++YQP+++ +V E L+RW PE+G I P FI Sbjct: 432 LHAHEKLELENLLHGALENQQFELYYQPQLSLPEQQVIGAEVLLRWHHPEKGFISPAVFI 491 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQ 518 AE + I +G WV+ + RQ ++W G+ L R+ VN+S RQ D+ +FT +K+VL Sbjct: 492 PLAEATNQIGAIGEWVLENACRQASQWLRDGLPLPRIGVNVSGRQFQDKNLFTLVKRVLA 551 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 E +++E+TE+ + + + A ++Q + G V LDDFG GYSSL QL PID Sbjct: 552 ETGLPADRLELEITETAVTASPDEAARLLQSLRECGIMVALDDFGQGYSSLGQLRDLPID 611 Query: 579 AIKLDQVFVRDIHKQPV--SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINER 636 +K+D FVRDI +P ++ A + + L VIAEGVE+ + +FL +G +E Sbjct: 612 RLKIDAAFVRDITDEPGHPGGAIAAATIGLGHNLGFSVIAEGVETQAQLSFLMAHGCDEV 671 Query: 637 QGFLFAKPMPAVAFERWYKRYLKRA 661 QG+ FAKPMP FE + + ++ Sbjct: 672 QGYYFAKPMPREQFEAFLRARMEAG 696 >UniRef50_B8KF61 Ggef/eal/pas/pac-domain containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KF61_9GAMM Length = 810 Score = 838 bits (2167), Expect = 0.0, Method: Composition-based stats. Identities = 186/662 (28%), Positives = 314/662 (47%), Gaps = 20/662 (3%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 ++ + + + + P + ++ L + A ++ ++ + Sbjct: 160 IKLANSAWELALGYTPEELIGKNFLELV-----------HEEDRAVTVKEMQNLSKGLKT 208 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 L + S ++ + A + GL A V + Sbjct: 209 LYFENRYRHKNGSYRVIAWSAAAADQDSIICAVGRDISKENAAKQGLFQAAAVFKNSGEG 268 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 I+I D +G I+ N TG + IGQ+ L R + A + + + Sbjct: 269 ILISDEKGLIRDVNAAFSQITGYSRDEAIGQATSLLRSGRHD-AEFYKKMWHALKETGTW 327 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E+W G + TDIT+ + +E+L+ LA+ D +T Sbjct: 328 RGEIWNRRKSGAVFPELLTISKI---DGQNSGFVAIFTDITQLKETEEQLQKLAHYDPLT 384 Query: 244 GLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 LPNR + + + +I A ++ V +LD+D+FK +ND+ GHL GD+LL + + Sbjct: 385 ELPNRYLINERLQQSIRRAQRRSERLAVFFLDIDSFKNINDSLGHLAGDKLLAMTANRLR 444 Query: 302 SCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGI 360 L D + R GGDEFL+L + + + +A +I+ LR P + V S SVGI Sbjct: 445 ELLRDDDTVGRIGGDEFLMLLEDINSPDVATNIAEKIIGALRKPTILEGRSVSVSASVGI 504 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 ++ P+ G + ++ +AD AMY+AKE GR F ++ + + F+ + +D+ LR+A + Sbjct: 505 SIYPDDGQTAETLMSNADAAMYSAKEQGRNTFRFYSENLTRAAFQNVLIDSALREAKSRN 564 Query: 421 QLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 + + +QP+I + LE L+RW P G + P FI AE +GLI +G+WV+ Sbjct: 565 EFRLAFQPQIDIVTNSLLGLEVLLRWHHPTLGTVSPAQFIPQAERTGLIRDIGQWVLEQA 624 Query: 480 VRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 Q KW +G+ R+AVN+SA Q + ++QVL+ NF +++ELTES L++ Sbjct: 625 CLQGNKWLAEGLPFGRLAVNVSAPQFRAEDFVDQVRQVLEYANFPPNRLELELTESVLVQ 684 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 + E + + + +G Q +DDFGTGYSSLS L + PID +KLD+ FV +I + Sbjct: 685 DTEQLIGNMDELRAMGIQFAIDDFGTGYSSLSYLKKMPIDRLKLDKSFVDNISTDDNDRI 744 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 + A+VA+ QA+ L+VIAEG+E ++ L G + QGFL+ PM E ++ Sbjct: 745 IAEAVVALGQAMGLEVIAEGIEYEEQARALRDIGCTQFQGFLYGMPMYTSRIEGVLRKEA 804 Query: 659 KR 660 +R Sbjct: 805 QR 806 Score = 58.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 60/204 (29%), Gaps = 10/204 (4%) Query: 36 ETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVD-ESDLSVHLVGRKINKREWAGNAS 94 + A A I E + +D +GR E + Sbjct: 64 GQVVNEDVAGFEAAMARLITEPEGKAQEVDFRADLDSGEQRWFRAIGRSYANSEQTVTHA 123 Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAI-VILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 A A+ + + + + + ++ G+I+ N E G ++IG Sbjct: 124 AGVLLDVTAQQSAQQY--YDTFFQQ-PNGMHLLASIEGDIKLANSAWELALGYTPEELIG 180 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 ++ +L + A + + + + E G + + + Sbjct: 181 KNFLELVHEE-DRAVTVKEMQNLSKGLKTLYFENRYRHKNGSYRVIAWSAAA-ADQDSII 238 Query: 214 IFLICSGTDITEERRAQERLRILA 237 G DI++E A++ L A Sbjct: 239 C---AVGRDISKENAAKQGLFQAA 259 >UniRef50_C7RQ11 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RQ11_9PROT Length = 978 Score = 838 bits (2167), Expect = 0.0, Method: Composition-based stats. Identities = 195/657 (29%), Positives = 313/657 (47%), Gaps = 14/657 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + + +P L V + T + ++E + Sbjct: 183 WVSDNITRVLHFSPAECLAPDWWVSHVHDADRAHVLETWPRLLADGSLLQEYRFRDGQGV 242 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + D L + + D L+ + ++ Sbjct: 243 VRWLRDHKRLLFDANHQPL-------AVVGNWDDVTAGHALAERQRLHATALESTRDGVL 295 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I D G I N + TG + IG++ L R + A + ++ Sbjct: 296 IADLTGRIISVNPAFSEMTGYTAAEAIGRNPRLLQSGRHD-RAFYQAMWASLTQAGHWQG 354 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 ELW G+ + V + TD+++ + +E L LA+ D +T L Sbjct: 355 ELWNRRADGEIYPQWATLSVVKDEHGQPTHYLAVFTDLSKLKHREEELEHLAHYDPLTDL 414 Query: 246 PNRNAMQDLIDHAINHADNNKV--GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR ++ L+ HA+ A V+ ++LD FK VND+ GH GD+LL V+ + + Sbjct: 415 PNRLLLRSLLQHALERAQRQGGKSAVLVINLDQFKNVNDSLGHALGDELLLGVTARLKAR 474 Query: 304 LEHDQVLARPGGDEFLVLAS-NTSQSALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIA 361 L H+ V+ R G DEF+ + + ++A +L L PF + E Y S+GI+ Sbjct: 475 LRHEDVVGRLGADEFVAILEASQDAENAGSIAGDLLAALAPPFVLADGHETYARASIGIS 534 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 + P+ G + ++R AD AM+ AK+ G Q+ +T E+ + L ++T LR+AL + Sbjct: 535 VFPQDGKGANDLLRSADVAMHRAKQRGGNQYAFYTGELGHGALQRLEMETALRRALIQGE 594 Query: 422 LVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 LV+HYQPK+ G + EAL+RWQ P GL+PP FI AEE+GLIVP+G WVI + Sbjct: 595 LVLHYQPKLDLASGVIVGGEALLRWQRPGFGLVPPYRFIPLAEETGLIVPIGAWVINETC 654 Query: 481 RQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 RQ+ W + G + VAVN+SARQ A + L L++ + + +ELTES L+ Sbjct: 655 RQIRAWAEAGQPSVMVAVNVSARQFAGGELEAVLATALRKHAVDPRMLGLELTESMLMAA 714 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 E A + ++G V LDDFGTGYSSLS L+RFP+D +K+D+ F+ I P + ++ Sbjct: 715 PEQATERLDALRRVGVAVALDDFGTGYSSLSYLSRFPVDELKIDRSFITHIVSDPKAANI 774 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 A++A+A + L+V+AEGVE+ + ++L KN ++ QG+LF+ P+PA F + Sbjct: 775 ATAVIALAHRMALKVVAEGVETETQLSYLRKNRCDQIQGYLFSAPVPADEFATLVSQ 831 >UniRef50_Q88QU8 Sensory box protein n=22 Tax=Gammaproteobacteria RepID=Q88QU8_PSEPK Length = 1247 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 180/658 (27%), Positives = 316/658 (48%), Gaps = 20/658 (3%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 E + L ++ + ++S L + E R + I Sbjct: 586 EVNEGFCRLTGYDLNPTIDQTSLDLGI-WVDLNERKRLVDQLNRDGFVRDFTCHI----- 639 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGN--ASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 SD + L G + L A V Sbjct: 640 -----RRSDGQIRLCELSARPLPITGVDCMLTIARDITERHLMQEKLQLAATVFENTAEG 694 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 ++I D I NR + TG E + +GQ+ L + ++A + + Sbjct: 695 VLITDIDQRISAVNRAFSEITGYSEIEALGQTPRLLASGQHDSA-FYLAMWHQLTAEGHW 753 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 + E++ G+ + S + + DI+ + AQ +L A+ D +T Sbjct: 754 QGEIYNKRKNGELYPSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLT 813 Query: 244 GLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 GLPNR ++ + + A N + V++LDLD FK +ND+ GH GD LL+ ++ + Sbjct: 814 GLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLK 873 Query: 302 SCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 + +AR GGDEF++L + +A+++L PF+ G E +TS S+GI Sbjct: 874 EQVRDVDTVARLGGDEFIILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGI 933 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 +L P+ G+D + +IR+AD AMY +K GR + +T ++ + E + L+ LR+A+E + Sbjct: 934 SLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQASERIALEHELRRAVERN 993 Query: 421 QLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 ++ + +QPK++ + + + EAL+RW P G +PP FI AEE+G I+ LG WV+ Sbjct: 994 EMSLCFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAEENGTILQLGDWVLEQA 1053 Query: 480 VRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 RQ+ W+ +++N++ QL + ++Q+L+ + + +E+TE+ ++ Sbjct: 1054 CRQMQAWKQHYQPFGPLSINLAGAQLRHPHLARRIEQLLKHHQLKAGDLQLEITENFIMS 1113 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 E AL+V+ Q +LG Q+ +DDFGTGYSSLS L R P+D +K+D+ F+R + P + Sbjct: 1114 QAEEALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDILKIDKSFIRGLPDDPHDAA 1173 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF-ERWYK 655 + RAI+A+ +++ L +IAEGVE+ + FL G + QG++ + P+P F + + Sbjct: 1174 IARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGYIVSLPLPPEEFAAAFLR 1231 Score = 83.8 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 63/240 (26%), Gaps = 22/240 (9%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRF---STTETTEPDRTLQ---LSAEQAARIREMTV 59 E + P + ++ L + +R Q + E + R + Sbjct: 462 EVNEAFEEQIGLPPDQVIGRTATDLDLWGVEGSGPLLLERLHQGGIRNLEMSFRRSNGQL 521 Query: 60 ITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSE 119 T L+ + L + Sbjct: 522 FTG------------LTSAETFELDGTPALVVAVRDISQLKETQQQLQTSEEKFAKAFHA 569 Query: 120 AHSAIVILD-SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 + +++ S G + N TG + I Q+ L + + +R R Sbjct: 570 SPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQTSLDLGIW-VDLNERKRLVDQLNR 628 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 G + I GQ + +G ++ DITE QE+L++ A Sbjct: 629 DGFVRDFTCHIRRSDGQIRLCELSARPLPITG--VDCMLTIARDITERHLMQEKLQLAAT 686 Score = 82.6 bits (204), Expect = 5e-14, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 61/237 (25%), Gaps = 17/237 (7%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 T + L + L + +E AA Sbjct: 333 TYSYVSPHAEDLLGYPLSDWLRPGFWRSILHPEDALWAQAYCD--SETAAGRDHSLDYRV 390 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF----AEQVVS 118 + D L V + I D + + L V Sbjct: 391 -----IRADGQPLWVRNIVSMIEHGHQPVMRGLMID-ISETKRTEDALRLSEQKFASVFQ 444 Query: 119 EAHSAIVILD-SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 + ++I S G + N E+ GL VIG++ L + E + Sbjct: 445 QCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDLWGVEGSG--PLLLERL 502 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 G +E+ GQ + ++ DI++ + Q++L+ Sbjct: 503 HQGGIRNLEMSFRRSNGQLFTGLTSAETF-ELDGTPALVVAV-RDISQLKETQQQLQ 557 Score = 53.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/221 (11%), Positives = 62/221 (28%), Gaps = 7/221 (3%) Query: 17 HNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLS 76 + + VL + + ++S Q + + L + Sbjct: 217 YQLAMAVPRDKSVLVGILDKVMADMSSSEISQIQQHWVGNVVDQRMFWSDLLVYGLPTVL 276 Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS-RGNIQR 135 + + + R +S A+ ++L +V + D+ Sbjct: 277 LLMAVLAVVIRINRRLSSEISRRIALEQELRSSEYHYRGLVESLSAIAWEADANDFTYSY 336 Query: 136 FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN--RVFFRSGNAYEVELWIPTCK 193 + ED G D + A +G + ++ + Sbjct: 337 VSPHAEDLLGYPLSDWL--RPGFWRSILHPEDALWAQAYCDSETAAGRDHSLDYRVIRAD 394 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 GQ L++ + ++ + DI+E +R ++ LR Sbjct: 395 GQPLWVRNIVSMI--EHGHQPVMRGLMIDISETKRTEDALR 433 >UniRef50_C5D2J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacillus sp. WCH70 RepID=C5D2J8_GEOSW Length = 568 Score = 838 bits (2165), Expect = 0.0, Method: Composition-based stats. Identities = 167/552 (30%), Positives = 292/552 (52%), Gaps = 5/552 (0%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 A+ + ++ +I+I D++ I N E TG +VIG++ L + + Sbjct: 17 IAKNIFEYSNESIIITDAQNRILFVNPAFEIVTGYSAEEVIGKNPRILQSGMHDKQ-FYK 75 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 + ++ E+W G+ + V N + +DITE +R E Sbjct: 76 KMWNDIKQHGVWKGEIWNKRKDGELYLEWLTISVVKDQKGNMTNYVAMFSDITEHKRNVE 135 Query: 232 RLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFG 289 +L LA D++T +PNR ++ ++ I + + +++LDLD FK +ND GH G Sbjct: 136 QLTRLALYDTLTNVPNRYLLEKRLESIIRMSKKHNQSFALLFLDLDRFKNINDTLGHRVG 195 Query: 290 DQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIG 348 D LL++ + + L +AR GGDEF+++ N MA +I+ L+ PF Sbjct: 196 DMLLKETAQRLKRMLRKQDTIARFGGDEFVIILPNLKHIREAAYMAEKIVESLKRPFCFN 255 Query: 349 LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLW 408 E+Y S S+GI++ P G+D +IR AD AMY AK+ GR Q+ ++ M+ + Sbjct: 256 HQEIYISTSIGISVYPYDGTDKETLIRMADRAMYQAKKNGRNQYALYHAGMHGNGKQLFQ 315 Query: 409 LDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGL 467 L+T LRKALE + ++YQP++ ++R++EAL+RW PE+G I P FI AEESGL Sbjct: 316 LETALRKALERGEFELYYQPQLDIKTKQIRAVEALIRWNHPEKGFISPGMFIPLAEESGL 375 Query: 468 IVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPI 527 I P+ W+++ + + + + +++++NIS L++ ++ +N I Sbjct: 376 ITPISDWIMMQACEHLKQLQLRFPYVKMSINISPIYFQQIDFLKKLQKTIESVNVNPRLI 435 Query: 528 DVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFV 587 ++ELTES ++ + E ++ + + +G + +DDFGTG+SSLS L RFPID +K+D+ F Sbjct: 436 ELELTESAVMPHAEQSVERLTKLKTMGMSIAIDDFGTGFSSLSYLHRFPIDILKIDRSFT 495 Query: 588 RDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPA 647 + + + ++V+AI+ +A +L ++V+AEGVE+ K+ L K + QG+ +KP+ Sbjct: 496 KQLSRYQQDSAIVKAIIMMAHSLQIRVVAEGVETKKQYQILEKQSCDFVQGYYVSKPLSI 555 Query: 648 VAFERWYKRYLK 659 + + Sbjct: 556 SELYEFLDMWNH 567 >UniRef50_A0LD38 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD38_MAGSM Length = 834 Score = 838 bits (2165), Expect = 0.0, Method: Composition-based stats. Identities = 184/630 (29%), Positives = 307/630 (48%), Gaps = 8/630 (1%) Query: 31 RFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWA 90 ++A + ++ + + + ES + + Sbjct: 180 DLYHDNPFILVSIYNINAHKLLERELADAKQAAELANHALLESHDKLEATVAQ-RTAALK 238 Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 + H L V AI+I D+ + N TG + Sbjct: 239 TSNEQLKQQMIEREQAQHRLRLTAGVFENTSEAIIITDAANRVMEVNPAFVRITGYPADE 298 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 VIG+ + R + +++G ++ E+W G+ + Sbjct: 299 VIGRDPGFMKSHRHTHEFYAEMWKKIWQTGQ-WQGEIWDRRHNGEIYPKWLTINAVYDER 357 Query: 211 KNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VG 268 + + I +DI+ + +ERL LA D +T LPNR Q +DHA+ A+ + VG Sbjct: 358 GHLVNCIGIFSDISRLKATEERLEQLAFFDCLTKLPNRAHFQSRLDHALTAANRRQNKVG 417 Query: 269 VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS 328 ++++DLD+FK +ND+ GH GDQLL + + I SC+ + +AR GGDEF ++ ++ + + Sbjct: 418 LIFIDLDHFKHINDSMGHNAGDQLLIEAAKRIQSCVREEDTVARMGGDEFTIILADLTDT 477 Query: 329 A--LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKE 386 A + +A IL P + +++ CS+G+A+ P+ ++ +I+HADTAMY AKE Sbjct: 478 AKVMTNVALTILESFTHPIVLEDKKLFIGCSLGMAIYPDDSGNAALLIKHADTAMYRAKE 537 Query: 387 GGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRW 445 GR ++ +T EMN + + L++ LR A+++ ++YQPK+ E+ EAL+RW Sbjct: 538 SGRNRYSFYTAEMNAQAQSRISLESELRYAIDHKAFELYYQPKVDAHSSEIVGFEALLRW 597 Query: 446 QSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW-RDKGINLRVAVNISARQL 504 P G+I P FI AEESGLI +G V+ + + + R L VA+N+S RQL Sbjct: 598 IHPTEGVISPNQFIPIAEESGLIAAIGNQVVEMACQGLQRINRCTPKPLPVAINLSVRQL 657 Query: 505 ADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGT 564 + Q L E +++E+TES L + E + +++Q QLG ++ +DDFGT Sbjct: 658 RQDNLVNYFSQTLANYGIEAEQLELEVTESFLAKPIEKSAALLQALHQLGYKIAIDDFGT 717 Query: 565 GYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE 624 GYSSLS L FPI +K+D+ FV ++ S+++V+AI+++A AL ++AEGVE+A + Sbjct: 718 GYSSLSYLKNFPIHTLKIDRSFVMEVAHNQESRTIVQAIISMAHALGYDLVAEGVETAAQ 777 Query: 625 DAFLTKNGINERQGFLFAKPMPAVAFERWY 654 L G QGF +A+P P Sbjct: 778 VNVLQGLGCGIMQGFHYARPAPLHEILEIL 807 Score = 64.5 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 73/247 (29%), Gaps = 35/247 (14%) Query: 33 STTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGN 92 + +E + L L EQ + + + + DL+VH + +I +E Sbjct: 5 NKSELRKRAEELMLRQEQIHTKWDRDNVNALI--------HDLNVHQIELEIQNQELRE- 55 Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 + + L+ E + + A +++D G + N + G K D+I Sbjct: 56 --SQLRLEKAKQVQESALARFEALFNSAPEGFILIDVSGMVLECNHTTLEMLGCKREDLI 113 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWI-------PTCKGQRLFLFRNKFV 205 + F F+ + + FF+S +E+ + + Sbjct: 114 -RKPFSAFVHIEDQPKFYASYPSFFKSTYPKPIEIRLIHKGSAFKHKDHSFIAELTGCST 172 Query: 206 HSGS------GKNEIFLICSGTDITEERRAQERL--RILANTDSITGLPNRNAM--QDLI 255 N L+ I + + L A L N + D + Sbjct: 173 LKQDLFKDLYHDNPFILVSIYN-INAHKLLERELADAKQAA-----ELANHALLESHDKL 226 Query: 256 DHAINHA 262 + + Sbjct: 227 EATVAQR 233 >UniRef50_A4Y0E0 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=23 Tax=Pseudomonas RepID=A4Y0E0_PSEMY Length = 766 Score = 838 bits (2165), Expect = 0.0, Method: Composition-based stats. Identities = 196/648 (30%), Positives = 317/648 (48%), Gaps = 14/648 (2%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMS 67 + Y L P L ++ D + E P+ ++ QA + + ++ Sbjct: 107 SPSYAALLGLTP-QALGDTRD----AWAERLHPEDRERVL--QALALDQQYDSYDNVYRL 159 Query: 68 LTVDESDLSVHLVGRKINKREWA-GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 D + H GR + R L A V +++ Sbjct: 160 RHADGTYRWFHSRGRLLRDEGGRPQRFIGIASDITQQRANDESLRQAAAVFDATQEGVLV 219 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D I N TG +V+GQ L R +AA ++ + +A+ E Sbjct: 220 TDPEQRIVHVNPAFSRITGYSAEEVLGQHPTLLKSGRHDAA-FYQSLWQALHNRDAWSGE 278 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 +W G+ ++ V + +DIT +R+Q L LA+ D ++ LP Sbjct: 279 VWNRRKSGEIYPQWQCIRVIHDEHGRISHYVAVFSDITALKRSQRELDYLAHHDPLSNLP 338 Query: 247 NRNAMQDLIDHAINHADNNKV--GVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR + I HA+ + + ++ V+ +DLD+FK +N++ GH GD LL+ V + L Sbjct: 339 NRLLFTERIAHALERSKSEQLRGAVLLIDLDHFKHINESLGHNVGDLLLKSVGERLQQDL 398 Query: 305 EHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 LAR GGDEF +L+ +A +L L PFR+ E+Y S+GI+L Sbjct: 399 PGGCTLARLGGDEFGLLSETCADAPQAAELAQNLLRCLEAPFRLDEHELYIGASIGISLF 458 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P+ ++R+AD+A++ AK GR + + E+ + + L ++LR AL+N +L Sbjct: 459 PDDADSVEQVLRNADSALFKAKSSGREGYAFYVQELTDYARQRVELASSLRHALDNHELR 518 Query: 424 IHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 + YQP G +EALVRWQ P+RGLIPP +FI AE++G+I P+ WV+ Q Sbjct: 519 VFYQPLHDLENGNPVGMEALVRWQHPQRGLIPPAEFIPIAEDNGMIGPIDAWVLEQACGQ 578 Query: 483 VAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 + +W +G LR VAVN+S+R + + + QVL E +++E+TES ++E+ + Sbjct: 579 MMRWNAEGSALRFVAVNVSSRLFSRGELDLKVAQVLAETGLSPQQLELEVTESAIMEDPD 638 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 ALS++ + LG ++ +DDFGTGYSSL++L R P+D +KLDQ FVR + ++ R Sbjct: 639 AALSLLTRLRALGVRLAIDDFGTGYSSLARLKRLPVDKLKLDQSFVRGLPDDIEDAAIAR 698 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVA 649 A++A+ +L L V+AEG+ES + FL G + QG+ F +P P A Sbjct: 699 AVIALGHSLGLNVLAEGIESPAQVDFLRALGCDYGQGYHFGRPAPVTA 746 >UniRef50_Q47Y83 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y83_COLP3 Length = 1071 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 193/612 (31%), Positives = 324/612 (52%), Gaps = 9/612 (1%) Query: 53 RIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF 112 +R + + ++T E + + + K E + A++ A Sbjct: 452 AVRRIVAKIKYISTAMTTMEVEHKFNQPLKVKGKDEISDMVIAFNQMLAERIKSEGEQRI 511 Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRN 172 + V A AI+I ++ I+ N +G +V+G+S L + + + Sbjct: 512 SAAVFKYASEAIMITNAENRIETVNPAFCHISGFSIEEVLGKSPNILNSGKHDNH-FYQK 570 Query: 173 NRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQER 232 N+++ E+W G+ F V K + I +DIT+ ++ +E Sbjct: 571 MWQSLEQDNSWQGEIWNKRKNGEIYPEFLAISVVRDQDKKPLQYISLFSDITKHKKYEED 630 Query: 233 LRILANTDSITGLPNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGD 290 + + AN DS+TGLPNR + + + + A++++V ++++DLD FK VND +GH GD Sbjct: 631 IWLQANYDSLTGLPNRGLCVERLHNKLKGDKAEDSEVALLFIDLDRFKFVNDTWGHSSGD 690 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRI-G 348 +LL+ ++ + +C+ +AR GGDEF+VL S A+E + ILT L +PF + Sbjct: 691 ELLKLAAIRLRNCIREKDTVARFGGDEFVVLLVGLSNRFAIERVVKNILTSLSMPFHLRN 750 Query: 349 LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLW 408 E S S+G+ + P G + ++++ADTAMY AK GR F FT MN+ V + Sbjct: 751 NNEAVVSASIGVTIGPVDGDNVELLLKNADTAMYQAKAAGRNTFQFFTKSMNETVSRRMH 810 Query: 409 LDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGL 467 ++ LR+A++ + V+HYQP ++ GE+ EAL+RWQ P++GLI P FI AEE+GL Sbjct: 811 IEQALRQAIKRQEFVLHYQPVVSLDTGEIIGAEALIRWQHPDKGLIYPDSFIEIAEEAGL 870 Query: 468 IVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT---IFTALKQVLQELNFEY 524 I P+G+WVI + W D G+ ++VAVN+S+RQ + I +K+ L+ N Sbjct: 871 IEPIGQWVIEQACTDLRYWHDLGLKIQVAVNVSSRQCKQTSQTPIKDIIKKALKVNNISP 930 Query: 525 CPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQ 584 + VE+TES L++N E ++ +Q LG +++DDFGTGYSSLS L FPID +K+D+ Sbjct: 931 SSLKVEITESSLMDNSEEMMTTLQDIRSLGVAIYMDDFGTGYSSLSYLKHFPIDVMKIDR 990 Query: 585 VFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKP 644 F+ SLV A+V + +L+L+++ EG+E+ + +L G + QG+ +KP Sbjct: 991 SFIAGSIDDKTDASLVEAVVLIGHSLSLKLVGEGIETKQHYDYLRSLGCDYGQGYFISKP 1050 Query: 645 MPAVAFERWYKR 656 + + A ++ Sbjct: 1051 IASKALITLCQQ 1062 >UniRef50_Q2BPN3 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) withPAS/PAC sensor n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPN3_9GAMM Length = 878 Score = 837 bits (2163), Expect = 0.0, Method: Composition-based stats. Identities = 197/633 (31%), Positives = 325/633 (51%), Gaps = 8/633 (1%) Query: 35 TETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESD-LSVHLVGRKINKREWAGNA 93 E PD L A + + + + + + K+ +E Sbjct: 248 WEQVHPDDRSGLWASIVHTGKHGLAWSHEFRVFHKNGQMHWVRGSALPSKLGSQEGLLWN 307 Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 D + L A S + I+I D R I NR + +G ++IG Sbjct: 308 GIILDITPE-KASIEQLRLAGIAFSSTNEGIMITDKRNRIIDINRAYMNISGYGRDELIG 366 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG-KN 212 ++ L + ++ ++ E+W G+ + + N Sbjct: 367 KNPSILRS-EHHSNEFYQSIWKSLEEERHWQGEIWNRLKNGEVVPHWVNINAVHDPNTDA 425 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVY- 271 + DI+ + ++E+L LA+ D++T LPNR +DHA+ H + ++ V++ Sbjct: 426 LTHFVSVIADISNIKASEEKLSHLAHHDALTNLPNRLLFSARLDHALTHREASEKIVMFH 485 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SAL 330 LDLD FK +ND+ GH +GDQLL V+ + L LAR GGDEF +L S Sbjct: 486 LDLDRFKHINDSLGHKYGDQLLLQVTERLKGVLSDKDTLARVGGDEFAILVEELEHVSDA 545 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 E++A R++ + PF + + +T+ S+G+AL+P+HG D + +HAD A+ AK+ GR Sbjct: 546 ESIADRLVEAMEQPFTLDGKDYFTTASIGLALAPDHGDDIDTLTKHADIALNQAKDSGRN 605 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPE 449 F F PE+++ V E++ L+ LRKAL +Q +HYQP++ G + EAL+RW PE Sbjct: 606 NFAFFQPELSETVQEWIKLEPELRKALAENQFQLHYQPQVDSTGTAIVGAEALIRWHHPE 665 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQT 508 G+IPP F+ AEE GL+ +G WV+ + Q++ WR +G+ R+A+N++ Q+ Q Sbjct: 666 MGIIPPNQFLPIAEEIGLMNKIGEWVMNTALEQLSFWRSRGLIGFRLAINLAGDQITKQN 725 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + + Q L+ +++E+ E+ L+E++E A S +Q +LG + LDDFGTGYS+ Sbjct: 726 LPMVVMQALEHFQIPAEMLELEILETFLMEHEEEATSTFKQLRELGVHLSLDDFGTGYSA 785 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 LS L + PI +K+DQ VRDI + P +++ +A++ +A L+L V AEGVE+ + FL Sbjct: 786 LSYLKKLPITKVKIDQSLVRDIPEDPNDEAIAKAVILLAHTLDLTVCAEGVETRAQREFL 845 Query: 629 TKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 ++ QG+LF+KP+ A AF K++ K A Sbjct: 846 ESENCDQLQGYLFSKPIEANAFTNLLKKHNKLA 878 >UniRef50_Q1GXZ6 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=2 Tax=Proteobacteria RepID=Q1GXZ6_METFK Length = 1238 Score = 835 bits (2159), Expect = 0.0, Method: Composition-based stats. Identities = 198/623 (31%), Positives = 313/623 (50%), Gaps = 25/623 (4%) Query: 53 RIREMTVITSSLMMSLTVDESDLSVHLVGRKI------NKREWAGNASAWHDTPAVARDL 106 R S+ + L+ ++ L V + + E S Sbjct: 611 ARRFGLRACWSMPI-LSSNQQVLGTFAVYSREVRVPEQREMELVSACSHIAGIAIERHHS 669 Query: 107 SHGLSFAEQVVSEAHSAIVIL--DSRG----NIQRFNRLCEDYTGLKEHDVIGQSVFKLF 160 L E ++ + ++I DS G I N+ E G +V+G+ L Sbjct: 670 EEQLKLLETSIARLNDIVLIAEADSEGKQNPRIIFVNKAFERLMGYTAEEVLGKDPGFLD 729 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 + R + + G + EL G+ ++L + + S + Sbjct: 730 GPNTQMEELWR-VKALLKQGESVRTELVNYRKNGEEIWLEMDILPIANSAGVFTHWVSVQ 788 Query: 221 TDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFK 278 DITE + A+ R++ LA D +T LPNR + D ++ A+ ++ +++LDLDNFK Sbjct: 789 RDITERKAAESRIQHLAFYDMLTNLPNRLLLLDRLEQALLNSMRLKRSGALLFLDLDNFK 848 Query: 279 KVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS------ALEA 332 +ND +GH FGD LL V+ +L+ + +AR GGDEF+V+ N S+ Sbjct: 849 TLNDTHGHDFGDMLLEQVAQRLLNSVRITDTVARLGGDEFVVVVENLSEQGCNAAQEASL 908 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGS-DSTAIIRHADTAMYTAKEGGRGQ 391 +A +IL L PFR+ E Y+SCS+G+AL +++ AD AMY AK GR Sbjct: 909 VADKILLALSQPFRLSGYEHYSSCSIGVALFCNEQQVTVDELLKRADLAMYEAKAAGRNT 968 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERG 451 F F P M + + ++ +LR+AL D++ ++YQP++ +G + EALVRW+ P++G Sbjct: 969 FRFFDPAMQALITKRAAMEEDLRQALRRDEMRLYYQPQVDSQGSLLGAEALVRWEHPQQG 1028 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTI 509 L+ P FI AEE+GLI+P+G WV+ Q+ W R + L ++VN+SARQL Sbjct: 1029 LLSPAAFIELAEETGLILPIGEWVLRTACMQLVAWAGRPETAGLVLSVNVSARQLHQHDF 1088 Query: 510 FTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSL 569 + +L+E + +ELTES L+EN E ++ + +G +DDFGTGYSSL Sbjct: 1089 IDRVFSILKETGANPQSLKLELTESTLVENIEEMITKMNILKAMGVGFSMDDFGTGYSSL 1148 Query: 570 SQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLT 629 + L R P+ +K+D+ FVRD+ S+V+ I+A+ L ++V+AEGVES ++ FL Sbjct: 1149 AYLKRLPLSQLKIDRSFVRDVLVDSNDASIVQTIIALGHGLGIEVVAEGVESWEQQQFLE 1208 Query: 630 KNGINERQGFLFAKPMPAVAFER 652 K+G E QG+LF +P PA ER Sbjct: 1209 KHGCLEYQGYLFGRPQPAEQLER 1231 Score = 95.7 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 51/171 (29%), Gaps = 4/171 (2%) Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLS----FAEQVVSE 119 M + L+ +R A H+ R + L Sbjct: 335 FMAGALFTGIVAGLVLLWNLQIRRRVRERTQALHEEVRQRRMVEMELQSSQEQVRLTFHS 394 Query: 120 AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRS 179 A + I + G N + G E ++ L R E A + + Sbjct: 395 ASAGIAMTSVDGQFLLVNPAFCEIVGYSEDELKKMHCRDLNDGRNELDAWKNRQWLLEGK 454 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 + VE T G+ +++ + + G + LI +I +++R + Sbjct: 455 IDRSVVEKRYTTKSGRSVWVRISASLIKGPDGSPRNLIKVVENIEQQKRQE 505 >UniRef50_C9P6X4 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P6X4_VIBME Length = 919 Score = 835 bits (2158), Expect = 0.0, Method: Composition-based stats. Identities = 182/569 (31%), Positives = 302/569 (53%), Gaps = 13/569 (2%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 ++ + + L A V A +V+ D + +I R N+ D TG + DV+ Sbjct: 338 IYEYNQVGDAMQHMVENLKIAATVFESA-EGMVVTDEKKHILRVNQAFTDITGYQPKDVL 396 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH-SGSGK 211 G + + R + + ++ +++ E++ G+ + S Sbjct: 397 GHHIKVIRSGRH-NQSFYDELELQLKTQGSWQGEIFNKRKNGEEYLQWTMITAVISDHED 455 Query: 212 NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGV 269 I + + DIT+ + A+ +++ LA D +TGLPNR + + ++ A ++ N + Sbjct: 456 EIINYVITLIDITQRKAAESKIKQLAFYDQLTGLPNRQLLMERLESARLNSQRNGQYGAI 515 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS- 328 +YLDLD+FK +ND GH GD+ L VS +L C+ +AR GGDEF+++ Sbjct: 516 LYLDLDDFKTLNDTRGHDTGDKFLTLVSQRLLDCVRRTDTVARIGGDEFVIILEQLDSDL 575 Query: 329 -----ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 + + +IL L P+ I IE +++ S+G+ L +++HAD AMY Sbjct: 576 DIASKRADLLCRKILDTLSKPYYIDNIEHFSTLSIGVTLFLGETKGIDELLKHADLAMYQ 635 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALV 443 AK GR F PEM +V E+ + ++R AL ++ ++YQP++T G++ EAL+ Sbjct: 636 AKGAGRNTHRFFNPEMQAKVLEHAAMANDIRHALTRNEFTLYYQPQVTHDGQLTGAEALI 695 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN--LRVAVNISA 501 RWQ P++G I P++FI AEE+GLI+PLG WV+ + +A W++ + L +A+NISA Sbjct: 696 RWQHPKQGTISPIEFIPIAEETGLILPLGEWVLDQACQVLAVWQNSPLTDSLVLAINISA 755 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 +Q + + LQ + +ELTES L E+ E ++ + Q + G LDD Sbjct: 756 KQFHQTGFVQQVLEALQRYRANPDRLKLELTESMLHEDLEDTITKMSQLKKYGVSFSLDD 815 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSL+ L R P+D +K+D+ FVRD+ + R IV++A+++NL VIAEGVE+ Sbjct: 816 FGTGYSSLNYLKRLPLDQLKIDKSFVRDLLTNSHDADIARTIVSLAKSMNLAVIAEGVET 875 Query: 622 AKEDAFLTKNGINERQGFLFAKPMPAVAF 650 ++ L G + QG+LF++P+P AF Sbjct: 876 QEQRLALASYGCLDFQGYLFSRPVPLEAF 904 >UniRef50_Q21SH7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=Q21SH7_RHOFD Length = 658 Score = 833 bits (2154), Expect = 0.0, Method: Composition-based stats. Identities = 189/635 (29%), Positives = 318/635 (50%), Gaps = 19/635 (2%) Query: 36 ETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRK-INKREWAGNAS 94 + SAE+ ++ L + + E+ ++L+ I E Sbjct: 23 DQRGVVLYANESAERLFER--GELVGKDLAVPIHSGETRQDINLIRPSGIGWAELRSAPI 80 Query: 95 AWH---------DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 W + GL A+ V +++ DS I R N + TG Sbjct: 81 TWDKQPAFVICVRDITERKTSDLGLHLADTVFDSTREGLMVTDSAQRIVRINPAFSEITG 140 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 DV+ Q+ L R ++A ++ E+W + + V Sbjct: 141 YSAADVLDQTPALLRSGRHDSA-FYAAMWDSINVSGHWQGEVWNRRKNSEIYPQLISIDV 199 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN- 264 + TD+++ R +Q L LA+ D +T LPNR + + H I A Sbjct: 200 IRDHTGRVCNYVAVLTDLSKLRSSQLELDFLAHHDPLTRLPNRLLLLSRLQHGIELAQRD 259 Query: 265 -NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 + ++ LDLD FK +ND++GHL GD+LL+ V+ ++ + + R GGDEF VL Sbjct: 260 GTHLALLMLDLDRFKDINDSFGHLVGDELLQLVATRLVKQVRTIDTVGRFGGDEFSVLME 319 Query: 324 NT-SQSALEAMASRILTRLRLPFRIG-LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 + +A+ I+ L P+ + +EV SVGI++ P++G +++ AD+A+ Sbjct: 320 DVAGAEQAARVANDIIRVLSEPYGLSSGVEVRIGASVGISIYPDNGLTPELMLQQADSAL 379 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLE 440 Y AK GRG+F F+ + Q + ++ LR+A+ +L ++YQP++ G + E Sbjct: 380 YQAKIEGRGRFAYFSESLTQAARARIDIEVRLRRAITQGELRVYYQPQVDIPSGRIVGAE 439 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNI 499 ALVRWQ P GL+PP FI+ AE +GLI + WV+ + +Q +WR G+ L +AVN+ Sbjct: 440 ALVRWQCPIEGLVPPARFITIAEATGLIGEIDDWVLRETCQQGQRWRAAGLPTLTLAVNL 499 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 SA Q I + QVL++ + +++ELTES L++ + A+ ++ + LG ++ + Sbjct: 500 SAYQFLQGDISQTVAQVLRDTGYPAAFLELELTESALMQREAQAIQMLDRLKALGVRLAI 559 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSL+ L FP+D +K+D+ F+ DI +V AI+A+A +L L+V+AEGV Sbjct: 560 DDFGTGYSSLAYLKLFPLDVLKIDKRFIDDIPAHRDDMEIVTAIIAMAHSLRLKVLAEGV 619 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 E+ ++ A+L G ++ QG+L ++P+PA FE+ + Sbjct: 620 ENKEQLAYLQTQGCDQFQGYLTSRPVPAAEFEKLF 654 Score = 51.0 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 39/130 (30%), Gaps = 24/130 (18%) Query: 108 HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAA 167 L + +++ IV++D RG + N E + +++G+ + S Sbjct: 3 ENLINFQLILTTISDGIVVVDQRGVVLYANESAERLF--ERGELVGKDLAVPIHSGETRQ 60 Query: 168 ASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEER 227 + + G + + + + DITE + Sbjct: 61 D------------------INLIRPSG-IGWAELRSAPITWDKQPA--FVICVRDITERK 99 Query: 228 RAQERLRILA 237 + L LA Sbjct: 100 TSDLGL-HLA 108 >UniRef50_Q1PY13 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY13_9BACT Length = 857 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 182/688 (26%), Positives = 332/688 (48%), Gaps = 46/688 (6%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDES 73 + + P + + L + + ++ +E + + + T Sbjct: 169 VFGYEPDELIGKHFSELI--HPDDLKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTGQRK 226 Query: 74 DLSVHLVGRKI-------------------------------------NKREWAGNASAW 96 + + + N + + G Sbjct: 227 TTGLQIRVKSKKSPEYMEYTIQIIKWPKKHEKIIEVAATGHYDSDIMKNDKRFVGTVGVI 286 Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 D + + V ++ + I + D+ G I N TG + +V+G+++ Sbjct: 287 RDITGS-KHAEEMICTLSLAVEQSPAMIAVTDTDGRIDYINPKFCKVTGFEPEEVLGKNL 345 Query: 157 -FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 + + + + S ++ G+ + + + Sbjct: 346 IDIIQPGGESLSMADKTLWKAITSKGEWKEAFSSRKKHGELFWTSLSLSAIKSNEGFISH 405 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLD 273 + DITE ++A+ER+ LA DS+T LPNR D ++ AI HA + V ++D Sbjct: 406 YLAIMEDITEHKQAEERIHYLAYYDSLTALPNRELFHDRLNMAIIHAHRKQQMLAVAFID 465 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEA 332 +D FKKVND GH GD+LL+ ++ + SC+ + ++R GGDEF++L + S+ Sbjct: 466 IDRFKKVNDTLGHSTGDRLLKIIADRLKSCIREEDTVSRQGGDEFVLLLTEISRMEDAND 525 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 + RIL +L+ P I ++ S S+GIAL P G+ + A++++AD+AMY +KE GR + Sbjct: 526 VTQRILKKLKEPVIIDDHDLCISASIGIALYPGDGTTAEALLKNADSAMYISKESGRDNY 585 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG 451 ++ + ++ +E L + LR+ALEN +LV++YQP++ G + +EAL+RW+ P++G Sbjct: 586 HFYSSTVQEKAYEQLLEEMYLRRALENRELVLYYQPQVNIATGRLVGMEALLRWKHPKKG 645 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIF 510 LI P +FI AE++G IVP+ WV+ +Q W+ G+ + +AVNIS + + Sbjct: 646 LISPAEFIPLAEDTGQIVPIDFWVLHTACKQNMAWQRAGLPSVPIAVNISGHTFGRENLI 705 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 + VL + +D+E+TE I+N + + + + LG Q+ +DDFGTG+SSLS Sbjct: 706 DFVNNVLHDTRMSPDALDLEITEGIAIQNLQTTIYKLNKLKSLGIQITIDDFGTGFSSLS 765 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L++FPI +K+ F+ ++HK P + ++V+A++A+A++L L VIAEGVE+ ++ FL Sbjct: 766 YLSKFPIQKLKIGMTFIHNLHKDPTNSAIVKAVIAMAKSLQLTVIAEGVETDEQFEFLQG 825 Query: 631 NGINERQGFLFAKPMPAVAFERWYKRYL 658 +E QG+L +K + + R+ + Sbjct: 826 LQCDEFQGYLCSKAVTSEEMGRFLAKNA 853 Score = 59.9 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 64/229 (27%), Gaps = 43/229 (18%) Query: 47 SAEQAARIREMTVITSSLMMSLTVDESDLSV--HLVGRKINKREWAGNASAWHDTPAVAR 104 S + A + V++ + V+ +L+ KI+ A + + Sbjct: 72 SIQAHASRTPIVVLSGLGDEEVAVEALKKGAQDYLIKGKIDGDSLARTMRYSMERKQIEL 131 Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 +L G +++V I +D+ G N G + ++IG+ +L Sbjct: 132 ELQDGKQRYKRLVEILPDIIYRIDANGYFTFINEA-VQVFGYEPDELIGKHFSELIHPDD 190 Query: 165 EAAAS--------------RRNNRVFFRSGNAYE-----VELWIPTCKGQRLFL------ 199 S + F + +++ + + K Sbjct: 191 LKKVSRSEVLSEYSGKTSDYKTTPKLFDERRTGQRKTTGLQIRVKSKKSPEYMEYTIQII 250 Query: 200 ----------FRNKFVHSGS-----GKNEIFLICSGTDITEERRAQERL 233 H S K + + DIT + A+E + Sbjct: 251 KWPKKHEKIIEVAATGHYDSDIMKNDKRFVGTVGVIRDITGSKHAEEMI 299 >UniRef50_Q60BD0 Sensory box protein n=1 Tax=Methylococcus capsulatus RepID=Q60BD0_METCA Length = 1214 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 197/669 (29%), Positives = 319/669 (47%), Gaps = 21/669 (3%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 V + + + S+ +L P+ L+ + + + Sbjct: 557 IVSRWNPAAERIFGYGADRMIGRSAGILF--------PEDVLEQAEAIWREVSGGSG-NR 607 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 + ++T D + + + ++ D + L A Sbjct: 608 VVTANVTADGRTIRCEWYNTPLTTPDGTVIGVASLVDDITRREAVEAELRLAATTFE-TD 666 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 AI+I + G I R N TG ++ DV+G++ LF S A R Sbjct: 667 EAILIAGADGRILRVNAAFSRITGYRQEDVVGRNPR-LFKSGLHGAEFYREVWRSLEQTG 725 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 ++ E+W G+ + + + + +DI+E +R +E++R LA DS Sbjct: 726 RWQGEIWNRRKNGEVYPERKTITAVRSANGDITHYVAISSDISELKRTEEKIRQLAYYDS 785 Query: 242 ITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +TGLPNR+ + + + + A ++++DLD FK +ND+ GH GD+LL V+ Sbjct: 786 LTGLPNRSLIFERLTQQMKAARREGTYGALLFMDLDYFKTLNDSLGHHMGDRLLVQVAER 845 Query: 300 ILSCLEHDQVLARPGGDEFLVLAS------NTSQSALEAMASRILTRLRLPFRIGLIEVY 353 + +CLE ++ AR GGDEF+VL + + + A R+ L PF++ Y Sbjct: 846 LKNCLEDEEAAARLGGDEFVVLLAPAKPSASVAAGQAIVHARRVRELLSAPFQLDDYVHY 905 Query: 354 TSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNL 413 S S+GIAL P+ + + +++ ADTAMY AK GR + M V L L+ L Sbjct: 906 ISVSIGIALFPDGANTAEDVLKQADTAMYVAKNEGRDGVRFYESAMEAVVRGRLELEKAL 965 Query: 414 RKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGR 473 RKAL ND+ ++YQP++ G V EAL+RW PERG I P FI E++G+I+ +G Sbjct: 966 RKALANDEFEVYYQPQMLGDGRVVGAEALIRWFHPERGAISPDQFIPVCEQNGMILRVGA 1025 Query: 474 WVILDVVRQVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELT 532 V+ +A+ R +G+ L ++VN+S RQ + T L+Q E + +ELT Sbjct: 1026 IVLRRACACLAEIRARGLALPKLSVNVSPRQFMRSDLMTQLEQFCLENGVSPTDLCLELT 1085 Query: 533 ESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHK 592 E L+ + ELA++ I + LG +DDFGTGYSSL+ L P+D +K+ FVRD+ + Sbjct: 1086 EGVLLNHTELAVAQIGRLKNLGVSFSIDDFGTGYSSLAYLKHLPLDDLKIASAFVRDLEQ 1145 Query: 593 QPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 ++V IV++A+ L L VIAEGVE+ + L + G + QG FA+P+P F R Sbjct: 1146 DSSDAAIVETIVSMARHLGLDVIAEGVETRTQVEILERYGCHRFQGNYFARPLPKDDFIR 1205 Query: 653 WYKRYLKRA 661 + +RA Sbjct: 1206 FVAERQRRA 1214 Score = 91.5 bits (227), Expect = 9e-17, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 58/224 (25%), Gaps = 12/224 (5%) Query: 15 GSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESD 74 + + L D D L + R + V + + L D Sbjct: 450 HRYQEFAALFVPEDRELIEAALRGGRDDLLGVERPLCVRRADGAVRQVNFKVELQGRRGD 509 Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQ 134 L G + + + R L V A++ D + Sbjct: 510 SGPVLQGT-------LQDVTERWEAERALRQSEERLRLH---VEHLPLAVIEWDLDFIVS 559 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 R+N E G +IG+S LF + G+ V T G Sbjct: 560 RWNPAAERIFGYGADRMIGRSAGILFPE--DVLEQAEAIWREVSGGSGNRVVTANVTADG 617 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 + + + I + DIT + LR+ A Sbjct: 618 RTIRCEWYNTPLTTPDGTVIGVASLVDDITRREAVEAELRLAAT 661 >UniRef50_B3EBJ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Proteobacteria RepID=B3EBJ5_GEOLS Length = 965 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 208/658 (31%), Positives = 337/658 (51%), Gaps = 16/658 (2%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 + + L + S E P LQ + + S Sbjct: 305 IVDVNELAASSLGRTREEMIGTSCHRFICPNEEGRCPITDLQQELDN-EERDLIRADGSR 363 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 L + TV L + + V L +V Sbjct: 364 LPVIKTVSRVVL--------DGREHLLESFVDISRRKQVENSLKESEERYRMLVENQADL 415 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 ++ D GN+ + G E ++G+++ + M + A + ++ + Y Sbjct: 416 VIKTDMTGNLLFVSPSFCKLFGQTEEKLLGKALLPVIMLPEQLATAAGMEQMICSDTSYY 475 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E PT +G+R + +I G DIT+ + A+ + LA D +T Sbjct: 476 R-EYLSPTREGKRWIGWA-LRCIFNQSGQAEAIIGMGRDITDRKTAESTIEQLAYHDPVT 533 Query: 244 GLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 GLPNR + D + AIN A+ V +++LDLD FK +ND+ GH GDQLLR V +L Sbjct: 534 GLPNRTLLHDRLQLAINRAERDSQGVAILFLDLDRFKAINDSLGHAMGDQLLRLVGNRLL 593 Query: 302 SCLEHDQVLARPGGDEFLVLASNTSQSAL-EAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 C+ +AR GGDEF+VL S ++ +IL +L P++I EVYTS S+GI Sbjct: 594 DCVRSSDTVARLGGDEFVVLISALDNDHAVGSVVMKILEQLCEPYQIDDHEVYTSSSIGI 653 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 +L P G D+ ++++AD AMY AKE GR F+PE+N R E L L++ +R+ALE + Sbjct: 654 SLFPRDGRDAEELLKNADMAMYQAKEAGRNTCHFFSPELNMRATERLLLESTMRRALERE 713 Query: 421 QLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 + + YQP++ G + +EAL+RW+ P+ G++PP +FI AEE+GLIVPLG WV+ + Sbjct: 714 EFFLVYQPQMELRSGHIAGIEALLRWRHPDLGVVPPNNFIPIAEETGLIVPLGEWVLAEA 773 Query: 480 VRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 RQ +W+ +G LR+AVN+SARQ + + ++++L E + +++ELTES ++E Sbjct: 774 CRQAVRWQQEGQPPLRMAVNVSARQFRQRNLGLRIEKILMETGLDPALLELELTESAVME 833 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 N E A+ ++Q ++G + +DDFGTGYSSLS L FPID +K+D+ FV+ + + + Sbjct: 834 NPEEAILTLRQLKKMGITLSIDDFGTGYSSLSHLKHFPIDRLKIDRSFVKHVTRDHNDAT 893 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 + AI+A+A ++ L V+AEG+E +++ F+ + + QG+ ++P+ A F + KR Sbjct: 894 IAEAIIALAHSMKLTVVAEGIEHSEQMEFMHQRHCDTMQGYYLSRPVTAEEFGTFLKR 951 Score = 78.0 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 53/147 (36%), Gaps = 8/147 (5%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG-NIQRFNRLCEDYTGLK 147 +A A++ + R L + + +V H+ I+++D I N L G Sbjct: 260 FAVRAASELERRQAERVLKETEARLKTIVDSVHTGILVIDPENHRIVDVNELAASSLGRT 319 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 ++IG S + E + + + E + G RL + + Sbjct: 320 REEMIGTSCHRFICPNEEGRCPITDLQQELDNE-----ERDLIRADGSRLPVIKTVSRVV 374 Query: 208 GSGKNEIFLICSGTDITEERRAQERLR 234 G+ L+ S DI+ ++ + L+ Sbjct: 375 LDGRE--HLLESFVDISRRKQVENSLK 399 >UniRef50_C6CKZ2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Dickeya RepID=C6CKZ2_DICZE Length = 689 Score = 832 bits (2150), Expect = 0.0, Method: Composition-based stats. Identities = 196/657 (29%), Positives = 306/657 (46%), Gaps = 23/657 (3%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 Y + + S ++ + AR R+ +L Sbjct: 35 VNPAYGAIYGYTQEEMAGRSFTMVFPESA-----------RDSVLARHRQFLDEGGTLGG 83 Query: 67 SLTVDESD---LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 TV D L++ + + + + + A V A Sbjct: 84 EWTVMRRDGVILTIWSESVPFAQHGHRADRLVYVLDITERQKAREQMKIAAAVYESTQEA 143 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 I+++++ +I N TG DV+GQ +F S R A + Sbjct: 144 IIVINTSRSIISINPAFTRLTGYSAADVVGQ-PSYIFRSDRHDADFYTAMWRTVDEDGVW 202 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E+W G V + I + +DIT+ ++ + + AN D++T Sbjct: 203 VGEMWDRKKDGSDYLKEITINVIKDAAGTPINYVGVFSDITQRKKQEALIWRQANYDAVT 262 Query: 244 GLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 LPNR+ QD ++ A+ HA + ++ +DLD+FK VND+ GH GD LL VS + Sbjct: 263 TLPNRHHFQDKLERAVEHAKQSGRPMALMLIDLDHFKSVNDSLGHRAGDALLLAVSNRLT 322 Query: 302 SCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGI 360 C++ +AR GGDEF ++ ++ Q+ +A +L +L PF I + S S+GI Sbjct: 323 DCVQGADTIARLGGDEFAIILTDLHQNGDSGCLARTLLAQLAQPFNIDGESMLVSASIGI 382 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 AL P + ++AD AMY AK GR F +TP ++Q L L +LR A++ Sbjct: 383 ALFPNDSDTLEELFKNADQAMYAAKSAGRNCFNYYTPALHQAARARLRLTNDLRTAIQCG 442 Query: 421 QLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 Q ++YQP I +V EALVRW+ P RG+I P +FI AE++GLIVPLG WV Sbjct: 443 QFEVYYQPIIELSTNKVVKAEALVRWRHPIRGMISPAEFIPLAEDTGLIVPLGDWVARQA 502 Query: 480 VRQVAKWRDKG-INLRVAVNISARQLADQTIFTA-LKQVLQELNFEYCPIDVELTESCLI 537 + Q+A+WR + +VA+N S QL + Q L + E + +E+TE L+ Sbjct: 503 ITQLAQWRKIFDPHFQVAINQSPVQLRSKDFTEMTWVQELAQHGLEGNAVIIEITEGLLL 562 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 + + F G Q+ +DDFGTGYSSL+ L +F ID +K+D+ FV D+ V Sbjct: 563 NAESRVNDNLHLFRDTGIQIAIDDFGTGYSSLAYLRKFDIDCLKIDRSFVEDL--DGVGF 620 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 L AI+A+A +L L+V+AEGVE+ ++ L + G + QGFLF++P+PA Sbjct: 621 ELCVAIIAMAHSLGLKVVAEGVETQQQCDTLARIGCDYAQGFLFSRPVPAPELTILL 677 Score = 82.2 bits (203), Expect = 6e-14, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 2/126 (1%) Query: 109 GLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAA 168 S + ++ I +++ G+ N G + ++ G+S +F + Sbjct: 8 SESLFQAILDRCPVGIAVINYDGHYVTVNPAYGAIYGYTQEEMAGRSFTMVFPESARDSV 67 Query: 169 SRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 R+ R F G E + G L ++ + G L+ DITE ++ Sbjct: 68 LARH-RQFLDEGGTLGGEWTVMRRDGVILTIWSESVPFAQHGHRADRLVYVL-DITERQK 125 Query: 229 AQERLR 234 A+E+++ Sbjct: 126 AREQMK 131 >UniRef50_Q47X88 Sensory box sensor/GGDEF/EAL domain protein n=2 Tax=Colwellia psychrerythraea 34H RepID=Q47X88_COLP3 Length = 1086 Score = 829 bits (2144), Expect = 0.0, Method: Composition-based stats. Identities = 188/587 (32%), Positives = 301/587 (51%), Gaps = 7/587 (1%) Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 L + V K + E G R L A+ V + A++I DS+ I Sbjct: 486 ILEITKVKLKNAQGEVVGLI-GISKDITNKRQQEEDLKLADIVYQNSSEAMMITDSKNEI 544 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 N + TG ++IG++ F S ++ + + ++ E+W Sbjct: 545 IAINPALSEITGYSSSELIGKNPNV-FSSGKQNPEFYQLMWEEIKLTGTWQGEIWNTKKN 603 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G+ + + N I +DITE+++ + A DS+T LPNR D Sbjct: 604 GKEYPEWLSISTIYDDYGNVFRRIALFSDITEKKKKDALILRQAKYDSLTNLPNRIMFID 663 Query: 254 LIDHAI--NHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 ++ I +H N K ++++DLDNFKK+ND GH++GD LL + I C+ +A Sbjct: 664 RLEQEIKVSHRKNQKFALIFIDLDNFKKINDTRGHVYGDALLIEAGKRITHCIREVDTVA 723 Query: 312 RPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDS 370 R GGDEF +L S+ + +E++ ++L L PF I + Y S S+G+ + P S + Sbjct: 724 RLGGDEFTILLSDIADIHNVESICQKVLQTLSEPFFISKMYTYISASLGVTIYPNDASST 783 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 ++++AD AMY AK GR +FC FT M + ++L L +LRKA+ +QL + YQP + Sbjct: 784 LELLKNADQAMYLAKNLGRNRFCYFTASMQEEALDHLELINDLRKAISLNQLEVFYQPIV 843 Query: 431 TW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 G +R EAL+RW+ P RG++ P +FI AEESGLI+ +G WV V+ + +D+ Sbjct: 844 ELQTGVIRKAEALLRWKHPVRGMVSPAEFIPLAEESGLIIEIGDWVFKQTVQHINTCKDQ 903 Query: 490 -GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQ 548 G++++++VN S Q + L E I +E+TE L+ N+ + + Sbjct: 904 LGLDIQISVNKSPVQFRESIDQLDWLAYLAENQLPGENIVIEITEGLLMNNNTSTMERLS 963 Query: 549 QFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQ 608 +F G + +DDFGTGYSSLS L +F +D +K+DQ F R+I L AI+ +AQ Sbjct: 964 KFRSAGIGLSMDDFGTGYSSLSYLKKFALDYLKIDQSFTRNIAPGSEDMILSEAIITMAQ 1023 Query: 609 ALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 L L+VIAEG+E+ ++ L G + QG+ F++P+PA F + Sbjct: 1024 KLGLKVIAEGIETKEQMELLIGAGCDYGQGYYFSRPIPAEDFLQLLA 1070 Score = 78.8 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 9/169 (5%) Query: 76 SVHLVGRKINKREWAGNASAWHDTPAVARDL----SHGLSFAEQVVSEAHSAIVILDSRG 131 + E A +++ ++L S ++ + I G Sbjct: 358 DLDARVTLDTHDELNNIALGFNEMATSFQNLMIDKEEISSRLRAIIDNSPIGIWFTGIDG 417 Query: 132 NIQRFNRLCEDYTGLKEHDVIG---QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELW 188 N+ + G+KE D++ ++ +L + + E Sbjct: 418 RYHFVNKTFCNLAGIKEEDMLNTPSSNLAELLGDEIAHHCLDSDKAALAQDSPHVSFE-T 476 Query: 189 IPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 IP + L K + + LI DIT +R+ +E L+ LA Sbjct: 477 IPRSNAKPYILEITKVKLKNAQGEVVGLIGISKDITNKRQQEEDLK-LA 524 >UniRef50_C5S8G6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S8G6_CHRVI Length = 861 Score = 828 bits (2141), Expect = 0.0, Method: Composition-based stats. Identities = 179/601 (29%), Positives = 299/601 (49%), Gaps = 7/601 (1%) Query: 65 MMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 +M L E L++ + + D + + L V + I Sbjct: 127 VMPLQGTERYLAIDAGPVRDSSGRIIAVVETLRDRTS-HKLAELRLRQMASVFEHSQEGI 185 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 +I D I N TG + +G++ L ++AA R R + Sbjct: 186 MITDPATRILDVNASFVRVTGYSREEALGRTPTLLKSGLQDAAFYRALWRD-LNETGRWH 244 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ + I DIT+ + +Q RL LA+ D +TG Sbjct: 245 GEIWNRKKSGELYPEILHINAVQDPSGRVTHYIGMFIDITDLKNSQSRLENLAHYDVLTG 304 Query: 245 LPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR + + A++ A ++ V +LDLDNFK VND +GH GD+LL D+ + Sbjct: 305 LPNRLLLGYRLRQALDDAQRHERLAAVCFLDLDNFKLVNDHHGHETGDRLLIDIGRRLRD 364 Query: 303 CLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 L + +AR GGDEF++L ++ +Q L+ + R+L + P RI +++ + SVG+ Sbjct: 365 TLRSNDTVARLGGDEFVILLNDLRNQEELDNVLVRLLDGVAHPVRIDALQIVITVSVGVT 424 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 + P D ++RHAD AMY AK+ GR ++ +F PE + +R+AL++ + Sbjct: 425 IYPLDDHDPDTLLRHADQAMYQAKQMGRNRYQLFDPEAANAMQSRHRELERIRQALQHGE 484 Query: 422 LVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 ++YQPK+ R G+V +EAL+RW+ PERGL+PPL F+ E S LIV +G WV+ + + Sbjct: 485 FQLYYQPKVDMRLGQVVGMEALIRWRHPERGLVPPLQFLPLIEASPLIVEVGEWVLHEAL 544 Query: 481 RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQEL-NFEYCPIDVELTESCLIEN 539 Q+ +W +G L ++VNI+A + L+ +L E +++E+ ES +E+ Sbjct: 545 GQIRQWCAEGRPLTISVNIAAHHFQQRDFVLRLQTILAEHPEATPRLLELEILESAALED 604 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 + ++ +G + LDDFGTGYSSLS L + P + +K+DQ FVR++ + ++ Sbjct: 605 IQSVRGIMTACQAMGVRFALDDFGTGYSSLSYLKQLPAETLKIDQSFVRNMLEDSEDLAI 664 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 + ++ +A+ +VIAEGVE+ ++ L + G + QG+ +PMPA W + Sbjct: 665 IEGVIGLAKVFRKEVIAEGVETPEQGLLLMRFGCDHAQGYGIGRPMPAEQIPAWMDEFAT 724 Query: 660 R 660 Sbjct: 725 N 725 Score = 67.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 16/142 (11%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF-------------- 157 FA +++ + +LD+ G + +NR CE+ TG+ V+G Sbjct: 34 FAAELLEQLVVPTFVLDATGRVIVWNRACENLTGMPASRVLGSQDHWRAFYPECRPCLAD 93 Query: 158 -KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTC-KGQRLFLFRNKFVHSGSGKNEIF 215 L E R+G E W +G +L + S I Sbjct: 94 LVLHNRLDEIDHFYTEYDQLLRTGCEIHAENWCVMPLQGTERYLAIDAGPVRDSSGRIIA 153 Query: 216 LICSGTDITEERRAQERLRILA 237 ++ + D T + A+ RLR +A Sbjct: 154 VVETLRDRTSHKLAELRLRQMA 175 >UniRef50_C1DCZ4 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCZ4_LARHH Length = 759 Score = 828 bits (2140), Expect = 0.0, Method: Composition-based stats. Identities = 196/644 (30%), Positives = 321/644 (49%), Gaps = 5/644 (0%) Query: 21 WRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLV 80 L + L + P E R + ++ L + Sbjct: 112 EMLGYPAGALAGKSLVDLMPPGVAHEIGESVRRRHRDNITEQHYVLPLIHRNGHRLSVEL 171 Query: 81 GRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLC 140 ++ + + + L A V + I++ D+ G + N Sbjct: 172 HSRLTEFRGERVIVGVGLDISARLETERTLQLAATVFENSSEGILLTDADGTLITVNPAF 231 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 TG E +G+ A + + + ++ E++ G+ ++ Sbjct: 232 TRITGYTEEQALGRRSRMFRTDHVGQATNMQMMQ-SLAEHGHWQGEMFDRHRDGRLYPVW 290 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 + + TDI+ + A++RL LA+ D +T L NR+A+ ++ Sbjct: 291 LSLSAVYDED-RVSNYVGVFTDISRRKAAEDRLVFLASHDPLTRLLNRDALFRKLEDICL 349 Query: 261 HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLV 320 V+++DLD FK +ND++GH GD LLR V+ + + + +LAR GGDEF + Sbjct: 350 SGIEQSFAVLFIDLDRFKLINDSFGHATGDNLLRIVAARLSFVVGSNALLARQGGDEFTL 409 Query: 321 LASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADT 379 L +T Q +A+ MA+R+L L P + E++ + S+GIAL+PEHG D+ ++RHADT Sbjct: 410 LLEDTGQRTAVIDMANRLLDELSQPITLENQELHITASIGIALAPEHGKDAATLLRHADT 469 Query: 380 AMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRS 438 A+Y AK+ G+ F FT ++ + L L+ LR AL +QL + YQP+I R + Sbjct: 470 ALYRAKDAGKNTFAFFTHTLHGLSNQRLALENALRHALPRNQLTLAYQPQIDPHRQRLVG 529 Query: 439 LEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAV 497 +E L+RW PE G + P FI AEE+GLI+P+GRWV+ RQ+A W G ++ VAV Sbjct: 530 VEVLLRWHHPELGQVSPATFIPLAEETGLILPIGRWVLETACRQLAAWDTAGFSVGHVAV 589 Query: 498 NISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQV 557 N+SA Q D + LK VL + +++E+TES LI N A++++ + +LG ++ Sbjct: 590 NLSAHQFNDPGLTHHLKAVLSDSGLAARRLELEVTESTLINNPTAAIALMTELKELGVRL 649 Query: 558 HLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAE 617 +DDFGTGYSSL+QL RFP+D +K+D+ FV I ++ AI+A+A+ L+L V+AE Sbjct: 650 SIDDFGTGYSSLAQLKRFPLDTLKIDRTFVSGIPADASDLAITEAIIAMAKKLSLSVVAE 709 Query: 618 GVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 GVE+A + FL + G QG+ ++ P+ A A + + + A Sbjct: 710 GVETADQRDFLARCGSELIQGYFYSPPLAAEALHSFSRMFDSDA 753 Score = 65.3 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 6/152 (3%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 W + + RDL + ++ ++ I IL + N+ + G Sbjct: 61 HYWRRREHLYRSQRSELRDLRAQ---YDALIEQSLVGIYIL-KEHTLIYANQRASEMLGY 116 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 + G+S+ L R + L + G RL + + Sbjct: 117 PAGALAGKSLVDLMPPGVAHEIGESVRRRHRDNITEQHYVLPLIHRNGHRLSVELH-SRL 175 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILAN 238 + + ++ G DI+ + L++ A Sbjct: 176 TEFRGERV-IVGVGLDISARLETERTLQLAAT 206 >UniRef50_Q2SFI2 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI2_HAHCH Length = 913 Score = 828 bits (2140), Expect = 0.0, Method: Composition-based stats. Identities = 204/649 (31%), Positives = 333/649 (51%), Gaps = 17/649 (2%) Query: 15 GSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESD 74 ++ + + V+ + +QL ++ ++++ +++ + D Sbjct: 252 LGYSRSELVGK---VMFCD----LLSEDCVQLCWDKLGQLKKGGALSNLELNIRCKDGRL 304 Query: 75 LSVHLVGRKINKREWAGNASA-WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 V L + + S R L A V A++I D NI Sbjct: 305 FCVLLTSTALQSEDGEFRGSRCILVDYTERRRHEKELQQAAVVFDAIREAVIITDDARNI 364 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 N D TG DV G++ L S R R+ ++ E+ Sbjct: 365 VAVNNAFTDITGYTLDDVYGRNPR-LQQSGRHDKTFYRSLWRSITEHGHWQGEIENKRRN 423 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G+ ++N V N + +DI+ + +++LR LAN DS+TGLPNR + Sbjct: 424 GEIYPAWQNINVVYDKNGNVANYVSVFSDISVIKEKEKQLRHLANHDSLTGLPNRLLFFN 483 Query: 254 LIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 +++++ A + V ++++DLD FK +ND GH GD LL+ V+ +L + + ++A Sbjct: 484 SLENSLERARRRRMEVALMFIDLDRFKIINDTMGHEAGDILLKTVARRLLEAVRGEDMVA 543 Query: 312 RPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDS 370 R GGDEF + S A A +++ +R P IG E+ S S+GIA+ P ++ Sbjct: 544 RLGGDEFTISLEELSNTEDAAAKAGKLIETIRQPVHIGGHEIVCSASIGIAIFPHDADNA 603 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 + R AD AMY AKE R F +T E+ +R E+L L + +R+ALE ++ ++YQP+ Sbjct: 604 QNLARAADAAMYRAKELHRNTFEFYTSELTERAIEHLTLSSEMRQALERNEFELYYQPQF 663 Query: 431 TWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 G + E L+RW+ P RGLI P FI+ AE+S LI P+G WVI + R VA W Sbjct: 664 NLTSGRLVGAETLLRWRHPTRGLITPYCFINIAEDSALIDPIGGWVINQLCRDVAGWLKG 723 Query: 490 GINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPI--DVELTESCLIENDELALSV 546 G+ L R+A N+S++QL + ++ LQ E + ++E+TE L +++E ++ V Sbjct: 724 GLKLPRIAFNVSSKQLEHYDVKGRIEHALQRWGLEPSDLDLELEVTEGAL-QHEERSVEV 782 Query: 547 IQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAV 606 ++Q LG V +DDFGTGYSSLS+L PID +K+D++F+RD+ P +Q+L I+ + Sbjct: 783 LRQVRLLGLSVAIDDFGTGYSSLSRLKHMPIDTLKIDRMFIRDLPDDPNNQALASGIILL 842 Query: 607 AQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +AL L+V+AEGVE+ ++ FL + +E QGFL +KP+P AFE+ K Sbjct: 843 GRALGLKVVAEGVENVEQLRFLQERNCDEAQGFLLSKPLPKAAFEKMLK 891 Score = 84.2 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 46/155 (29%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 + N + G + + + + A LD RG I N Sbjct: 191 QGNPVQMHGTIQDITERKRDENRKNEYAHLIYDLYNNAPCGYHSLDPRGVIVDINETALR 250 Query: 143 YTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRN 202 + G +++G+ +F +S + G +EL I G+ + Sbjct: 251 WLGYSRSELVGKVMFCDLLSEDCVQLCWDKLGQLKKGGALSNLELNIRCKDGRLFCVLLT 310 Query: 203 KFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 C D TE RR ++ L+ A Sbjct: 311 STALQSEDGEFRGSRCILVDYTERRRHEKELQQAA 345 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 6/155 (3%) Query: 89 WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKE 148 A +A R+ + L A+Q+ A + D + N ++ GL Sbjct: 72 VAWVLTANEARNKALRESRNNLDKAQQI---ARLGNWVWDLKRNEVYWSDQVYRNLGLSL 128 Query: 149 HDVIGQSVFKLF-MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 HD L + + A + + Y +E + G+ + V Sbjct: 129 HDNKASYEKFLECVHPDDRARIVKLVDEALENKQVYGIEHRVIWPDGEERIVCGAGEVIF 188 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILAN--TD 240 N + + + DITE +R + R A+ D Sbjct: 189 DVQGNPVQMHGTIQDITERKRDENRKNEYAHLIYD 223 >UniRef50_P72843 Regulatory components of sensory transduction system n=1 Tax=Synechocystis sp. PCC 6803 RepID=P72843_SYNY3 Length = 840 Score = 827 bits (2139), Expect = 0.0, Method: Composition-based stats. Identities = 199/658 (30%), Positives = 308/658 (46%), Gaps = 15/658 (2%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 + + + + S F E L + + + Sbjct: 182 IMDVNQPFCQFFGLTKQELVGVSRQQFYFWVDEQQRQSFLRDLL------LWQKDGLVKF 235 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGN--ASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 + V + + V + E+ R L Q ++ Sbjct: 236 ENREIEVYDQEKQVRTMLLSGEPMEFNRVDCLLFVMRDITERRKAEKQLKILSQACEQSP 295 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 ++IVI D +GNI N E+ +G K +V+G++ L + SG Sbjct: 296 ASIVITDVQGNITYVNPKFEEISGYKSAEVLGRNPRILKSGNKTQED-YELMWKTLASGR 354 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 + E G+ + + S + DIT+E++ E L A+ D Sbjct: 355 NWHGEFHNRRKNGELYWERASISPISNQQGIVTHYVAVKEDITKEKQQAEALFHQAHYDH 414 Query: 242 ITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +TGLPNR +D + AI A K G+++LDLDNFKKVND GH GDQLL +VS Sbjct: 415 LTGLPNRILAKDRLQQAIESALRQKHIFGLMFLDLDNFKKVNDTLGHDAGDQLLVEVSER 474 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSV 358 + L +AR GGDEFL++ S S L A+A R+L +R P + +E + S+ Sbjct: 475 LQRALRQTDTVARLGGDEFLIILDQVSHSRKLMAIAQRLLRVMRQPVNLQGLEFFVHGSI 534 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 GI + P+ G + ++R+ADTAMY AK GR F FTP MNQ + + +++ LR+ L Sbjct: 535 GITVFPDDGFHADVLLRNADTAMYAAKLAGRNMFRFFTPHMNQAAQQRMAIESELRQGLS 594 Query: 419 NDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 + I YQP ++ G++ EAL+RW + G +PP FI AEE GLIV LG W++ Sbjct: 595 RQEFQILYQPIVSLESGQIVGAEALMRWHNRLLGTVPPDQFIPIAEEVGLIVELGEWLLD 654 Query: 478 DVVRQVAKWRDK--GINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESC 535 +V Q A W V+VN+S RQL D L+ LQ +++E+TE+ Sbjct: 655 NVCCQAAHWHSALGEQTFWVSVNVSPRQLKDSYFVAILQGFLQRYQVRPEWLELEITENL 714 Query: 536 LIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPV 595 ++E + L + + + LDDFGTGYSSL+ L +F +++K+D+ FV + Sbjct: 715 ILEENGDLLKNLSDLEEENIALSLDDFGTGYSSLNYLRKFNFNSLKIDRSFVELLPHDNN 774 Query: 596 SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 + LVRAI+A+A L L+VIAEG+E+ ++ FL G + QG+LF+ + +E Sbjct: 775 TVGLVRAIIAMAHHLELKVIAEGIETPEQWNFLRLQGCDYGQGYLFSPAIAVEEWESL 832 Score = 65.7 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 80/223 (35%), Gaps = 17/223 (7%) Query: 28 DVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKR 87 L+ + P L +Q + ++ + + + E ++ + K+++ Sbjct: 70 RRLKAAPATAEIPIIFLSALTDQKSIVKGLELGAVDYIHKPFQQEEIITRLQLQLKLHQT 129 Query: 88 EWAGNASAWHDTPAVARDLSHGLSF------AEQVVSEAHSAIVILDSR-GNIQRFNRLC 140 A + + + +++ I I G I N+ Sbjct: 130 NQALLQKNQQLEEQIEKTARTQAALMQSEINFAVAFNQSPDPIFIYGRNSGCIMDVNQPF 189 Query: 141 EDYTGLKEHDVIG--QSVFKLFMSRREAAASRRNNRVFFRSG----NAYEVELWIPTCKG 194 + GL + +++G + F ++ ++ + R+ ++ + G E+E++ Sbjct: 190 CQFFGLTKQELVGVSRQQFYFWVDEQQRQSFLRDLLLWQKDGLVKFENREIEVYDQEK-- 247 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 Q + + L+ DITE R+A+++L+IL+ Sbjct: 248 QVRTMLLSGEPM--EFNRVDCLLFVMRDITERRKAEKQLKILS 288 >UniRef50_B1Y3M1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y3M1_LEPCP Length = 745 Score = 826 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 178/643 (27%), Positives = 300/643 (46%), Gaps = 13/643 (2%) Query: 22 RLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVG 81 L E+ L E A + ++ + L G Sbjct: 101 LLGEARAKLVGRRFERYIAPVDRDRWHRHALSLSRRGEPGRIELLVQGAGGRSIHAQLDG 160 Query: 82 RKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCE 141 A + + L A A ++I D+ G I+R N+ Sbjct: 161 LMARANHDAPLLRIALTDISERKHAESELRLAATAFE-AQEGMMITDAHGVIERVNKAFT 219 Query: 142 DYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 TG + IGQ+ L R + A + ++ E+W G+ + Sbjct: 220 QMTGYSAAEAIGQTARLLHSGRHDPA-FYAAMWDSLQRTGTWQGEVWNRRKCGEVYAEWL 278 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH 261 + + + DI++ + +E + LA D +TGLPNR ++D ++ A+ Sbjct: 279 TITAVQDEHRTVTRYVGTMLDISQRKAREEEIAQLAFYDPLTGLPNRRLLKDRLNQAMAI 338 Query: 262 ADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL 319 + ++ ++++DLD+FK +ND GH GD LL++V+ + C+ +AR GGDEF+ Sbjct: 339 SARSQREGALLFIDLDHFKDINDTRGHDKGDLLLQNVAQRLSGCVREGDTVARIGGDEFV 398 Query: 320 VLA-------SNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTA 372 V+ ++ + S ++A +IL L LP+ + V+ S S+G+AL +H Sbjct: 399 VMLGADLSTATDEAASHARSVAEKILAALNLPYLMSGEFVHCSASLGVALFNDHHDTVDE 458 Query: 373 IIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW 432 +++ AD AMY AK GGR F + Q + L+ LR A++ D+LV+ YQP I Sbjct: 459 LLKRADQAMYQAKAGGRNTLRFFDTAVQQTMMLRAALEAELRLAVQRDELVLCYQPVIDH 518 Query: 433 RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD--KG 490 + + EALVRW+ P RGL+ P +FI AE+ GLI +GRWV+ Q+A W Sbjct: 519 QNRLLGAEALVRWKHPRRGLVSPAEFIPIAEDRGLIQAIGRWVLETACTQLATWAADPAT 578 Query: 491 INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQF 550 +L ++VN+SAR+L + + ++L + +ELTE+ ++++ + +++ +++ Sbjct: 579 ADLVLSVNVSARELHEPQFVERVIEILACTGARPARLKIELTENAVLDHVDDSIAKMKRL 638 Query: 551 SQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQAL 610 G ++ LDDFGTG+ SLS L R P+D +K+D+ FV+D+ ++ R I A+ L Sbjct: 639 KAHGIRLALDDFGTGHGSLSLLKRLPLDELKIDRTFVQDLLTDTHDAAIARTIAALGLNL 698 Query: 611 NLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 + V+AEGVE+ + L G QG LF P A R Sbjct: 699 GISVVAEGVETPAQRDLLIACGCRIFQGDLFGPPAALEALARM 741 Score = 54.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS-----------AIVILDSRGNIQ 134 +R A + L A+ + A LD+ G I Sbjct: 33 ERRAEAMAHELQVHRIELEMQNDELRRAQIALETARDRYIDLYDFAPVGYFTLDTNGLIT 92 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 N D G ++G+ + R R G +EL + G Sbjct: 93 EANLTGADLLGEARAKLVGRRFERYIAPVDRDRWHRHAL-SLSRRGEPGRIELLVQGAGG 151 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 + + + + + + I TDI+E + A+ LR+ A Sbjct: 152 RSIHAQLDGLMARANHDAPLLRIAL-TDISERKHAESELRLAAT 194 >UniRef50_A1S1U8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S1U8_SHEAM Length = 1069 Score = 826 bits (2135), Expect = 0.0, Method: Composition-based stats. Identities = 197/604 (32%), Positives = 311/604 (51%), Gaps = 7/604 (1%) Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 S+ + D + L + E A A A + + L A V + Sbjct: 457 SIASDMQKMADDPKLELTIKTKGSDEIAAMAEAMNKMLKERKKYRQALVRAAAVFEYSAE 516 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 I++ D+ +I+ N TG +V G++ L S R RS Sbjct: 517 GIMVTDADNHIELINPAFSQITGYSIEEVKGRNPSIL-SSHRNPPHLYDAMWESLRSTGK 575 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 +E E+W G+ + + + I DI+ ++ ++ + AN D++ Sbjct: 576 WEGEIWNRRKDGEVYPEYLAITLVRDDEGQIVHHIGLFMDISRRKQYEQDIWYKANFDTL 635 Query: 243 TGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 T LPNR + + + H + A++ K+ V+ LDLD FK +ND GH GD LL+ V+ + Sbjct: 636 TDLPNRKLLSERLGHELKMAEHDGRKLAVMVLDLDRFKYINDTQGHDCGDLLLKAVAKRL 695 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQSAL-EAMASRILTRLRLPFRIGLIEVYTSCSVG 359 + + +AR GGDEF+++ +Q E A R+L + PF++ + S S+G Sbjct: 696 QTVMGSTDFIARLGGDEFVIVLPRLAQEHAVEQYAKRLLQSMGDPFKVEQGSMSVSASLG 755 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 I L P+ G D ++ +A+TAMY AK+ GR F FT EMN + E L ++ +LR+A+ N Sbjct: 756 IGLYPQDGLDVETLLSNAETAMYGAKDEGRNHFKYFTQEMNLALIERLGMERDLRRAVAN 815 Query: 420 DQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 D+ + YQP + GEV SLEAL+RWQ PE+GL+ P+ FI AE+ GL+ LG+WV+ Sbjct: 816 DEFCLFYQPVVDMESGEVTSLEALLRWQDPEQGLVSPVRFIPVAEDMGLMGELGQWVMDK 875 Query: 479 VVRQVAKWRDKGINLRVAVNISARQLA--DQTIFTALKQVLQELNFEYCPIDVELTESCL 536 + +A+ G L +A+N+SA Q Q++ L+ L + VE+TES L Sbjct: 876 ALADLARLHTLGFGLSMAINVSACQCHCKRQSLDEQLRSALSRHGIAPRHLHVEITESLL 935 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 ++N L + LG ++LDDFGTGYSSLS L +FPI AIK+D+ FV + Sbjct: 936 LDNSHHCLDTLNNIRDLGCAIYLDDFGTGYSSLSYLKKFPISAIKIDKSFVEQLPGCESD 995 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 SLVRAIV ++++L ++++AEG+ES + AFL G QG+L+++P+P W +R Sbjct: 996 ASLVRAIVNMSKSLGMKLVAEGIESKDQQAFLQALGSQFGQGYLYSRPLPFEELLPWLER 1055 Query: 657 YLKR 660 + Sbjct: 1056 HQHS 1059 >UniRef50_Q12GF0 Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=3 Tax=Polaromonas RepID=Q12GF0_POLSJ Length = 989 Score = 826 bits (2134), Expect = 0.0, Method: Composition-based stats. Identities = 188/647 (29%), Positives = 314/647 (48%), Gaps = 18/647 (2%) Query: 25 ESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKI 84 ES +L+ ST E + E + R+R+ + + + D + ++ Sbjct: 341 ESERLLQRSTAELLGQEIWQDFGEEVSGRLRQHIQRALATNRQVEFEYFDAPL-GKWLEV 399 Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGN------IQRFNR 138 +A + + + R+ L E ++ + +VI+++ + I N Sbjct: 400 RAYPFAEGLAVYFRDVSERRNSQEQLMLLETGIARLNDIVVIVEASPHHGSGPQIVFVND 459 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF 198 E +TG +V+ + L R + EL I G + Sbjct: 460 AFERHTGYTRDEVLSRMPGMLQGPGTRQDELARIF-SALQQWKQARGELVIYRKDGGSFW 518 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 + + + + G DIT+ + A E++ LA D +T LPNR + D ++ A Sbjct: 519 VDLEIVSVAAQNGDLTHWVAVGRDITQRKAADEKIHHLAFYDPLTELPNRQLLLDRLEQA 578 Query: 259 INHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGD 316 + + ++++DLDNFK +ND GH GD LL+ V++ + C+ +AR GGD Sbjct: 579 LADCTITRQEGVLMFIDLDNFKILNDTVGHSKGDLLLQKVAVRLKGCVRKLDTVARLGGD 638 Query: 317 EFLVLASNTS-QSALEA-----MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDS 370 EF+V+ + Q +A ++L LR P+ + + Y++ S+G+ Sbjct: 639 EFVVMLQDLGTQPEAATRKAQIVAEKVLATLREPYDLAGYQHYSTSSIGVTPFNARQGSV 698 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 + +++ AD AMY AK GR C F P+M V L T+LR L Q ++HYQP++ Sbjct: 699 SELLKQADLAMYQAKTMGRNTVCFFDPDMQASVSANAALSTDLRAGLREHQFLVHYQPQV 758 Query: 431 TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 + +EAL+RW+ P+RG++ P +FI AEE+GLI+PLG+WV+ Q+A W+ + Sbjct: 759 DREQRITGVEALLRWKHPQRGMVSPAEFIPVAEETGLILPLGQWVLEQACLQLAVWQKRP 818 Query: 491 --INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQ 548 L +AVN+S RQ + ++ + + +ELTES L + E+A++ + Sbjct: 819 ETAGLSIAVNVSVRQFRHPDFVDMVMAAIKHTGIQPHNLKLELTESLLADRMEIAIAKMG 878 Query: 549 QFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQ 608 LG + LDDFG GYSSLS L R P+D +K+D+ F+ D+ P ++ AI+++AQ Sbjct: 879 TLKALGVTLALDDFGMGYSSLSYLKRLPLDQLKIDKSFIADVFSDPNDAAICSAIISLAQ 938 Query: 609 ALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +L L VIAEGVE+ + +FL G QGFLF P+P FE + + Sbjct: 939 SLGLDVIAEGVETEAQRSFLAGLGCGYYQGFLFCPPLPIAEFEAFMQ 985 Score = 75.7 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 68/209 (32%), Gaps = 22/209 (10%) Query: 37 TTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVD---------ESDLSVHLVGRKINKR 87 T + L +AE R+R + + + + + + + Sbjct: 227 QTLEELLLHYAAESRGRLRHVISECARKGTPFDEEAQMLTAQDGRRWVRIIGEVVRDGQG 286 Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQV---VSEAHSAIVILDSRGNIQRFNRLCEDYT 144 A D A + L A ++ ++ A V LD G N+ E Sbjct: 287 AITRIQGALQDINARKQAQEETLRLAMRLTTTLASITEAFVTLDREGRFTYLNQESERLL 346 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 +++GQ +++ F + R++ + + E E + L + Sbjct: 347 QRSTAELLGQEIWQDF-GEEVSGRLRQHIQRALATNRQVEFEYFD-----APLGKWLEVR 400 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERL 233 + + ++ D++E R +QE+L Sbjct: 401 AYPFAEGLAVY----FRDVSERRNSQEQL 425 Score = 46.8 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 56/177 (31%), Gaps = 14/177 (7%) Query: 71 DESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQ------VVSEAHSAI 124 D +++++GR++ + + + R+ + + A Sbjct: 140 DGDLDALNILGRQVVAQLDLRRQHKFLADRSAEREQQSRMRLQHSENRLHIAMRTAQMGN 199 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRS----G 180 L+ + + G + Q++ +L AA SR R G Sbjct: 200 WSLNLADDSLTLSSEFPAILGTSA--AMPQTLEELL--LHYAAESRGRLRHVISECARKG 255 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 ++ E + T + R ++ V + + DI ++AQE LA Sbjct: 256 TPFDEEAQMLTAQDGRRWVRIIGEVVRDGQGAITRIQGALQDINARKQAQEETLRLA 312 >UniRef50_A9D5G8 Sensory box protein n=1 Tax=Shewanella benthica KT99 RepID=A9D5G8_9GAMM Length = 1066 Score = 825 bits (2132), Expect = 0.0, Method: Composition-based stats. Identities = 184/613 (30%), Positives = 315/613 (51%), Gaps = 8/613 (1%) Query: 54 IREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA 113 I + S + + D S+ L K E A + + + + L A Sbjct: 450 ISNLVDSISLIAKDMQKMTLDPSLELKVPVRGKDEIAQLSHSLNLMLEERSKANRQLKLA 509 Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN 173 V + I++ D+ +I+ N TG DV G+S L +++ Sbjct: 510 AAVFESSSEGILVTDADNHIELVNPAFTQITGYSLEDVKGRSPSVLNS-QQQTRHFYDEM 568 Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 ++ ++ E+W GQ + V I I DI+ ++ ++ + Sbjct: 569 WQSLQTEGKWQGEIWNKRKNGQVYPEYLAITVVKDDAGQIIQHIGLFLDISNRKQYEQNI 628 Query: 234 RILANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQ 291 + D +T LPNR+ + + A N +V +++++LD FK ND YGH G++ Sbjct: 629 WYKTHYDLLTKLPNRSLYTIKVQQEMTMAQENNRQVAILFINLDRFKYTNDIYGHEVGNK 688 Query: 292 LLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLI 350 LLR V+ + S + +AR GGDEF+++ + ++A+A ++ RL PF + Sbjct: 689 LLRQVASRLKSLVNKHDFVARLGGDEFIIILPRIRRQHQVQAIADKVNARLASPFGVDGD 748 Query: 351 EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLD 410 ++ S S+GI+L PE+GS + R+A+TAMY AK GR + ++ EMN+ + E + L+ Sbjct: 749 DLMISASIGISLFPENGSSEELLTRNAETAMYQAKNDGRNNYRYYSSEMNEHILERIQLE 808 Query: 411 TNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIV 469 LR+A+ + +HYQP + + +EAL+RWQ P+ G+I P FI AEE+GLI Sbjct: 809 QRLRQAVIRQEFCLHYQPIVNLDDRTITGVEALIRWQDPKFGMIAPDMFIPIAEETGLIE 868 Query: 470 PLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT---IFTALKQVLQELNFEYCP 526 P+G WV+ + +A W G + +A+N+S RQL Q LK +L++ + E Sbjct: 869 PIGEWVLQQALTDLAHWHRLGFKISMAINVSGRQLLGQNKTSFKCLLKALLKKNDIEPQY 928 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 + +E+TES L+++ E ++V++ LG +++DDFGTGYSSLS L RFPI IK+D+ F Sbjct: 929 LHIEITESMLMDDTEQCMTVLESIRSLGLDIYIDDFGTGYSSLSYLKRFPIAVIKIDKSF 988 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 + ++ + L++AIV + Q+L L+++AEG+E+ + L G + QG+LF+ P+P Sbjct: 989 IDNMLESESDAKLIKAIVMMGQSLELKLVAEGIETHAQWQMLQALGCDFGQGYLFSHPLP 1048 Query: 647 AVAFERWYKRYLK 659 A + + + Sbjct: 1049 AQELASFLHQQAQ 1061 >UniRef50_D1T5E1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T5E1_9BURK Length = 1055 Score = 824 bits (2131), Expect = 0.0, Method: Composition-based stats. Identities = 208/647 (32%), Positives = 316/647 (48%), Gaps = 20/647 (3%) Query: 19 PYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDE--SDLS 76 P + +S L + L E + V + + +D Sbjct: 409 PEQVVGKSDTDLPW--------RAFADLLNEHDREVASTGVPKMNFEVDFVIDGVHRTRV 460 Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSR---GNI 133 + + G ++ D + L + + + +AI+I I Sbjct: 461 TSKLPFTDGDGQVIGVLGSYTD-ITEQKRADLALRLQSRALDASVNAILITAPSPSGNLI 519 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 + N TG +VIG L R+ R + + Sbjct: 520 EYVNPAFMRITGYDLDEVIGHDCRVLQRDDRDQEGV-ALIREALAANREVSAVVRNYRKD 578 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G + + I D+TE R QE+L AN D +T LPNRN ++D Sbjct: 579 GALFWNQLFIAPVPNAEGVITHHIGVINDVTELIRYQEQLEYQANYDGLTRLPNRNLLRD 638 Query: 254 LIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 ++HA+ A + V VV+LDLD FK VND+ GH GD+LL V+ + C +A Sbjct: 639 RLEHALVVAQRHHTGVAVVFLDLDGFKNVNDSLGHSVGDRLLGVVAERLARCSRTSDTVA 698 Query: 312 RPGGDEFLVLASN-TSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDS 370 R GGDEF+++ ++ + +L R+ + P + E+Y CS+G +L P+ G D+ Sbjct: 699 RHGGDEFVIVMTDTVDEQSLITWMERVRASIAEPVWLDGTELYVGCSMGASLFPQDGDDA 758 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 +++ AD AMY AK+ GR F + PEMN L L+ LR+AL +++ ++HYQP++ Sbjct: 759 ETLMKKADVAMYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQV 818 Query: 431 TW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK 489 G++ +EALVRW PE GL+PP FI AEESGLI PL WV+ + RQ W+D+ Sbjct: 819 DIVSGQIVGIEALVRWHDPEAGLVPPSSFIPLAEESGLIGPLSEWVLREACRQNKAWQDQ 878 Query: 490 GINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQ 548 G+ RV+VN+SAR + I + QVL E E +++ELTES ++ N E A+ ++ Sbjct: 879 GLPPARVSVNLSARVFQQRNIAKLVMQVLAETGLEPRYLELELTESTIMRNAEEAVLMLN 938 Query: 549 QFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQ 608 + LG + +DDFGTGYSSLS L RFP+D +K+D+ FV DI +++ AI+A+A Sbjct: 939 ELHALGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAH 998 Query: 609 ALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +L LQVIAEGVE++ + FL + +E QGF FAKP+ Sbjct: 999 SLKLQVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTEGISELLH 1045 Score = 68.8 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 78/238 (32%), Gaps = 17/238 (7%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 T + L + +R T+E +R L SA+ + + + Sbjct: 270 VNTAAIEQYGYTESEFLGMTIRAIR-PTSEVARLERHLARSADL-----RQSHTMAGIWR 323 Query: 67 SLTVDESDLSVHLVGRKIN---KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 D S +SV++ +N + A D + E V+ Sbjct: 324 HRRKDGSIISVNVSYHALNFMGRDASFVLADDVTDQINAEAEALRSNQMLEAVIDNIPQR 383 Query: 124 IVILDSRGNIQRFNRLCEDYTGLK-EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 I D N GL V+G+S L R A ++R +G Sbjct: 384 IFWKDLNSRYLGCNMAFARDAGLAYPEQVVGKSDTDL-PWRAFADLLNEHDREVASTGVP 442 Query: 183 ---YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 +EV+ I G +K + I ++ S TDITE++RA LR+ + Sbjct: 443 KMNFEVDFVI---DGVHRTRVTSKLPFTDGDGQVIGVLGSYTDITEQKRADLALRLQS 497 Score = 64.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 40/140 (28%), Gaps = 4/140 (2%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG-NIQRFNRLCEDYTGLKEHDVIG 153 + + AR L+ + + + I D N + G E + +G Sbjct: 228 SVREKLRSARALARNDERFRSLFDDHTVPMYIFDRDTLRFLAVNTAAIEQYGYTESEFLG 287 Query: 154 QSVFKLFMSRREAAASRRNNRVF-FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 ++ + + A R R R + G + + + Sbjct: 288 MTIRAIRPTSEVARLERHLARSADLRQSHTMAGIWRHRRKDGSIISVNVSYHAL-NFMGR 346 Query: 213 EIFLICSGTDITEERRAQER 232 + + D+T++ A+ Sbjct: 347 DASFV-LADDVTDQINAEAE 365 >UniRef50_B1Y791 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y791_LEPCP Length = 1066 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 185/568 (32%), Positives = 288/568 (50%), Gaps = 6/568 (1%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A A A ++ + +++ D R I NR + TG E + + Sbjct: 485 ALAQFTREAQWQESLARTRLHAAALESTQDGVMVTDLRPRIVSVNRAFTEITGYSETEAV 544 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G S L R E A R G ++ E+ G+ + + Sbjct: 545 GMSPRLLQSGRHEPAFFTRLWNQLLTHGR-WQGEVQNRRKNGELYTQWMSVSTVRDEHDQ 603 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVV 270 + TDIT ++ A++RL+ LA+ D +T LPNR + ++HAI A +V V+ Sbjct: 604 PTHYVSVFTDITPQKEAEQRLQHLAHFDPLTQLPNRLMVLSRLEHAIASAARAERRVAVL 663 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-A 329 ++DLDNFK VND+ GH GD LLR V+ + + + L R GGDEF+++ + + Sbjct: 664 FIDLDNFKTVNDSLGHSAGDDLLRAVADRLGTRTRREDTLGRLGGDEFILMLEHLREPQD 723 Query: 330 LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 +A ++ L PFR+ EVY S+GI+L P+ G + ++R AD AMY AK GR Sbjct: 724 AAQVAQELIGLLETPFRVAGQEVYVQASIGISLYPDDGLEVGELVRDADAAMYQAKRAGR 783 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLEALVRWQSP 448 G + +T + L LDT LR+ALEN + V+ YQP + LEALVR P Sbjct: 784 GVYRFYTESLTTAAQSRLALDTRLRRALENKEFVLWYQPLYRLADRCLIGLEALVRLNQP 843 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQ 507 I P +FI EE+G I LG WV + RQ W D+G++ R+A+N+S +++ Sbjct: 844 GLPPIGPAEFIPLLEETGQITTLGAWVTQEACRQGRAWLDEGLDFGRIAINLSPQEIRRG 903 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 +++ L+ +++ELTES L+E E A + + + LG ++ +DDFGTGYS Sbjct: 904 QTDERVREALERSGLPAERLELELTESGLMEQGERAEAFLHRLRALGVRLAIDDFGTGYS 963 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SL+ L RFP+ +K+D+ FVRD+ LV+ +V++ + L + V+AEGVE+ + + Sbjct: 964 SLAYLKRFPVSKLKIDRSFVRDLPADANDAQLVQTMVSMGRNLGISVLAEGVETEAQFDY 1023 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYK 655 L G + QG+ F+ P PA W + Sbjct: 1024 LRSLGCDAAQGYFFSPPRPADEARHWLR 1051 Score = 46.8 bits (111), Expect = 0.003, Method: Composition-based stats. Identities = 25/197 (12%), Positives = 49/197 (24%), Gaps = 35/197 (17%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF-NRL------CEDYTGLKEH 149 L+ + + + D G E G + Sbjct: 202 RQRNESDAALAASEAHLRTFMRAMPDVSFLFDRDGRYLDVFGPAEKLAEPVERMLGRRIA 261 Query: 150 DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS 209 DV R R+ + E + +G R + Sbjct: 262 DV---------HGERHVELFMSVIRLALETREPQRCEFALEVQQGTR-WFEARVCAVPDR 311 Query: 210 GKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGV 269 ++ DI+E R A+ R+ +T L + ++ A + Sbjct: 312 E----QVVWVSWDISERRAAELRVT------ELTRL---YSFISQVNQAFVWTRSE--AE 356 Query: 270 VYLDLDNFKKVNDAYGH 286 ++ D V ++GH Sbjct: 357 LF---DRICNVAISHGH 370 >UniRef50_A1TX84 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TX84_MARAV Length = 890 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 205/580 (35%), Positives = 311/580 (53%), Gaps = 10/580 (1%) Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL----DSRGNIQRFNRLC 140 + AG + L ++ + E+ + IVI + NR Sbjct: 309 SHAAMAGRVYENRSLYLQLESRARKLQLYDRAIEESSNGIVICLADKTRDNPVIYANRAF 368 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 TG ++IG S L + R R R G + L G + Sbjct: 369 SIMTGYSHDEIIGLSPRFLLANDLAQPGLER-LRNCMRHGGSARAILRNYRKDGSLFWNE 427 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 I D+T+ +R + L AN D +TGLPNRN ++D ++HAI Sbjct: 428 VALAAVHNEHGEIAHFISVFNDVTDRKRYEAALEYQANHDDLTGLPNRNLLRDRLEHAIT 487 Query: 261 HADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 A + V+ LDLD FK+VND GH GD L++ V+ + C+ +AR GGDEF Sbjct: 488 KATREHTKLAVLLLDLDQFKRVNDGLGHKIGDTLIQRVASRMSQCVRDSDTVARLGGDEF 547 Query: 319 LVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 ++L+++ A +A ++L + R I E+ S S+GIA+ P+ G + + R+A Sbjct: 548 MILSTDIRDERAAATLAQKLLRQFRQKVAINGHEIIASASIGIAMFPKDGDNGDELFRNA 607 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEV 436 DTAMY AK+ GR F ++ EMN R+ E L+L+ +LR A+ QL + YQPK+ G V Sbjct: 608 DTAMYRAKDVGRNGFQFYSAEMNNRMRERLYLEQSLRNAIGLHQLSLWYQPKLDLASGSV 667 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRV 495 +S EAL+RW+ P+ G+I P DFI AEE+GLI+P+G WVI + RQ+AKWRD+ ++RV Sbjct: 668 KSAEALIRWRHPQLGMISPGDFIPIAEETGLILPIGAWVIEEASRQLAKWRDQENQDIRV 727 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 A+NISA QL+ + + Q L L + + +E+TE+ ++ + A+ +Q ++G Sbjct: 728 AINISAYQLSHGKLTDQVIQALDSLGLDPQSLTIEVTETAIMPQMDKAVCELQSLREMGI 787 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 +V LDDFGTGYSSL+ L RFPID +K+D+ FV DI S ++V+ I+ +A LN+ V+ Sbjct: 788 RVALDDFGTGYSSLTYLKRFPIDILKIDRSFVSDIADDEESGAIVKTIINLAHNLNMTVV 847 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 AEGVE+ + FL NG +E QG+ F KP+P+ + + Sbjct: 848 AEGVETEAQLEFLRTNGCDEVQGYYFCKPLPSEECLEFLR 887 >UniRef50_A1TZQ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Gammaproteobacteria RepID=A1TZQ7_MARAV Length = 819 Score = 822 bits (2126), Expect = 0.0, Method: Composition-based stats. Identities = 191/621 (30%), Positives = 322/621 (51%), Gaps = 11/621 (1%) Query: 48 AEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRK-INKREWAGNASAWHDTPAVARDL 106 A+ A R++++ +L L +D D + + D Sbjct: 197 ADMADYTRDLSL--RNLSRPLELDRPDTPAYQRDELGMVTEAINQMRERLIDDVTRRERD 254 Query: 107 SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 + + + ++ S+++I D + I+ NR TG ++IG+ L ++ Sbjct: 255 EAEIRKFSKAIDQSPSSVLICDRQWRIEYANRKFSQLTGNSPSEIIGKHPSSLIDPGVDS 314 Query: 167 AASRRNN---RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 +R+ R+ + ++ E+ G+R + + + G DI Sbjct: 315 HEARQLWKSIRLQVQRVGVWQGEVNSTRKNGERYWEQLVVTPIKDNNGESTGYLILGEDI 374 Query: 224 TEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVN 281 + +R +++L AN D +TGLPNR D + A+ A +KVGV++LDLDNFK +N Sbjct: 375 SIRKRYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRDESKVGVMFLDLDNFKHIN 434 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE-AMASRILTR 340 D GH GD LL + + I SCL +AR GGDEFLV+ + +A RIL Sbjct: 435 DTLGHDAGDTLLIEAARRISSCLRGTSTVARLGGDEFLVVLPGLNGPDASSQVAERILKT 494 Query: 341 LRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMN 400 PF + EV+ + S+GIA P+ +S +++HAD AMY AK G+ + FTPEM+ Sbjct: 495 FAPPFMLSGQEVFVTTSIGIATFPDDSDNSGTLLQHADAAMYEAKHKGKSAYARFTPEMS 554 Query: 401 QRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDFI 459 + E L +++++RKALE + +++QP + G + + EAL+RW +P G++ P FI Sbjct: 555 EVSHERLQMESHMRKALELGEFELYFQPIVDTASGGLVAAEALLRWNNPAMGMVMPDRFI 614 Query: 460 SYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQTIFTALKQVLQ 518 AEE+GLI+P+G WV+ + + W+ G + +AVN+S RQ D A+ + L Sbjct: 615 PLAEETGLIIPIGEWVVKEACQAAYCWQAMTGREISIAVNVSPRQFRDPGFTDAIMRALN 674 Query: 519 ELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPID 578 + N +++E+TE +++N +++Q ++G ++ +DDFGTGYS+LS L +P D Sbjct: 675 DSNLRPELLELEITERLILDNSIETADILKQLDKVGIRLSVDDFGTGYSALSYLKSYPFD 734 Query: 579 AIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQG 638 +K+D+ FV+D+ K+ SLVRAI+ +A +L L+V+AEGVE FL + QG Sbjct: 735 TLKIDKSFVQDVLKENEDASLVRAIINMAHSLGLKVVAEGVEEEDLTHFLKAEHCDYSQG 794 Query: 639 FLFAKPMPAVAFERWYKRYLK 659 + +++P+P F W + + Sbjct: 795 YFYSRPLPEQDFIHWLETNER 815 >UniRef50_C1DB08 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DB08_LARHH Length = 1092 Score = 822 bits (2126), Expect = 0.0, Method: Composition-based stats. Identities = 191/631 (30%), Positives = 324/631 (51%), Gaps = 13/631 (2%) Query: 32 FSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAG 91 F + R L+ + + L+ V + + + + Sbjct: 461 FDEATFKKAGRLLEAFRHSHSVATHEIHFDAVLVTPHGVRRRLALSARTLQVVGQGHY-- 518 Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 + R L + QV A+ I D+ I R N E TG +V Sbjct: 519 -VTGSVQDVTSLRRAERELMLSAQVFEHGSEAVFITDASHRILRVNPAFEAITGYAAGEV 577 Query: 152 IGQSV--FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS 209 +G + + + + R ++ E+ G+ + + V + Sbjct: 578 LGLTPDFRCVSSPGGTSISQR---WELAEQTGRWQGEIVCRRRSGEHYYEWSALSVVRHA 634 Query: 210 GKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGV 269 + ++ I +DI+ + A+ R LA D +TGLPNR+ + D + +N + + V Sbjct: 635 NGSVLYFIGQFSDISAVKAAEARALRLACFDPLTGLPNRSLLFDRLQEVLNR-EPHNGAV 693 Query: 270 VYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA 329 ++ DLD FK +ND+ GH GD +L++V+ +++ + + R GGDEF+++ S Sbjct: 694 LFCDLDRFKNINDSLGHTLGDAVLKEVARRLVARVRPGDTVCRYGGDEFVLVLPGLSDCV 753 Query: 330 L-EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 + E +A ++L + P + +++ + S+G+A+ P G+D A++RHAD A+Y AK G Sbjct: 754 VLEQLAEQLLADVSSPILLDGLDLRVTPSLGVAVFPRDGNDCDALLRHADAALYHAKSRG 813 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQS 447 R + FT E++ RV EYL ++ LR ALE + +HYQP++ G V +EAL+RW+ Sbjct: 814 RNTYRFFTREIDDRVSEYLHIEHGLRSALERGEFELHYQPQVDMAFGRVVGVEALLRWKH 873 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLAD 506 PE+G+I P+ F+ AEE+GLIVP+G WVI + RQ WR G+ + +AVN+S RQ + Sbjct: 874 PEQGMISPVRFVPIAEETGLIVPIGMWVIREACRQAMLWRRAGLRPMTMAVNLSGRQFSR 933 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 + A+ + L + + + VE+TES ++E+ + A +V++ G V +DDFGTGY Sbjct: 934 S-VIEAIDEALADSGLDPRWLQVEVTESVIMEDTQEAYTVLEALRARGLTVAVDDFGTGY 992 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSL+ L RFPID +K+D+ F+RDI + +V AI+ +A L ++V+AEGVE+ + Sbjct: 993 SSLAYLKRFPIDKLKIDRSFIRDIDLDEDNPVIVDAIIGMAHNLRIKVLAEGVETRAQWD 1052 Query: 627 FLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 +L + G +E QG+L ++P PA A +W Sbjct: 1053 YLRQQGCDEVQGYLVSRPQPAAALGQWMLER 1083 Score = 74.9 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 65/210 (30%), Gaps = 7/210 (3%) Query: 23 LTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGR 82 L D E +P + A A ++ T S L L V GR Sbjct: 201 LGRMPDDHYQDWLERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGDWLHVFERGR 260 Query: 83 KINKREWAGNASAWHDTP---AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRL 139 + +R+ G H + E +V+ + A+ +D+ G + + Sbjct: 261 -VYQRDADGKPLRMHGVIIDLSRQLHAEEAQRRLEGIVAASSDAMAFIDTEGLVGFASPA 319 Query: 140 CEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFL 199 + +V G+ + +L + + G ++ W+ G L Sbjct: 320 LCHLLSIGTQEVRGRQLEELLAAYANRRELMQGIEGALA-GRNLRMQTWLTLPGGGVRCL 378 Query: 200 FRNKFVHSGSGKNEIFLICSGTDITE--ER 227 + + + + +C D+T+ + Sbjct: 379 ESSFDPYRNTEGQVVGAVCVLRDMTDNARK 408 Score = 48.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 42/162 (25%), Gaps = 17/162 (10%) Query: 86 KREWAGNASAWHDTPAVARDLS---HGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCED 142 ++E G + D + + + + + D Sbjct: 138 QQEPVGAVVTFVDITRERQRQESLQRMEARWQALFETSGDVAYDFDVATRRLELAPAWMQ 197 Query: 143 YTGLKEHDVIGQSVFKLFMS--RREAAASRRNNRVFF-----RSGNAYEVELWIPTCKGQ 195 G +G+ + R R + Y VE + G Sbjct: 198 MLG------LGRMPDDHYQDWLERVDPQVRDDVEAALCAHLQGETADYSVEYPLLHESGD 251 Query: 196 RLFLFRNKFVH-SGSGKNEIFLICSGTDITEERRAQERLRIL 236 L +F V+ + + + D++ + A+E R L Sbjct: 252 WLHVFERGRVYQRDADGKPLRMHGVIIDLSRQLHAEEAQRRL 293 >UniRef50_Q2YCL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=2 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCL1_NITMU Length = 1054 Score = 822 bits (2126), Expect = 0.0, Method: Composition-based stats. Identities = 192/676 (28%), Positives = 324/676 (47%), Gaps = 26/676 (3%) Query: 1 MKTVRESTTLYNFLGSHNPYWR---LTESSDVLRFSTTETTEPDRTLQLSAEQAA----- 52 ++T R ++ + + + WR + + ++ L E + E A Sbjct: 377 LRTERILESITDAFYTLDREWRFTYVNKEAENLLQRNREDLLGRVCWEEFKETAGTTFDR 436 Query: 53 --RIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGL 110 M T + + VH + + + + ++ ++ + Sbjct: 437 EYHRALMENRTVTFEEFYVPLDEWFEVHAYPSEEGLTVYFRDITERKESEQARQEAHVRI 496 Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 ++ +A AI++ I+ +N+ E G +V+G+ V L+ A Sbjct: 497 RQQASLLDKATDAIIVFGMDNCIEFWNQGAERLYGWTSEEVMGREVEMLY---DNVAVFD 553 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 NR SG + EL L + + + + TDIT+ + A+ Sbjct: 554 EANRALLSSGE-WRGELAQRRRDQSMLNVEAHWTLVRNDDGEPQAIFAINTDITQRKSAE 612 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLF 288 + LA DS+TGLPNR + D + HA+ + N+ ++++DLDNFK +ND GH Sbjct: 613 NEILHLALYDSLTGLPNRRLLLDRLGHALAVSARNQRMGALLFIDLDNFKLLNDTLGHDM 672 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA-------SNTSQSALEAMASRILTRL 341 GD LLR V+ + SC+ +AR GGDEF+V+ + + + + + RI + Sbjct: 673 GDLLLRQVAPRLSSCVRESDTVARLGGDEFVVILMGDFGEDHDEALTQISTICERIRSAF 732 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 PF + + + S+GIAL + + +++ AD AMY AK GR F P+M Sbjct: 733 IQPFNLDPYIHHITPSIGIALFNDQSQTTNELLKRADLAMYQAKASGRNAMRFFDPDMQA 792 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISY 461 + L++ L K+ E ++ ++HYQ ++ RG + EALVRWQ P RGL+PP +FI Sbjct: 793 AMNARAILESELYKSWERNEFILHYQLQVDSRG-IIGAEALVRWQHPRRGLLPPSEFIPQ 851 Query: 462 AEESGLIVPLGRWVILDVVRQVAKW--RDKGINLRVAVNISARQLADQTIFTALKQVLQE 519 AEE+GLI+PLG WV+ Q+A W + + + L ++VN+S+ Q + +L Sbjct: 852 AEETGLILPLGEWVLETACNQLASWALQPETVQLNLSVNVSSLQFCQPDFVEQVISILDR 911 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 + +ELTES L+ + + ++ + G LDDFG GYSSL L R P+D Sbjct: 912 TGANPQRLKLELTESILVHDMDDTIAKMMTLKARGVGFALDDFGIGYSSLYYLKRLPLDW 971 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ FVRD+ ++VR I+ +A+++ L VIAEGVE+ + FL +G QG+ Sbjct: 972 VKIDRSFVRDVLTDNNDATIVRTILLLAKSMGLAVIAEGVETGAQKDFLASHGCTAYQGY 1031 Query: 640 LFAKPMPAVAFERWYK 655 LF++P+P FER+ + Sbjct: 1032 LFSRPLPLEQFERFVQ 1047 Score = 68.0 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 51/150 (34%), Gaps = 17/150 (11%) Query: 95 AWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ 154 A + A R+LS+ E+++ A LD N+ E+ D++G+ Sbjct: 361 AMEEQQATTRELSNAKLRTERILESITDAFYTLDREWRFTYVNKEAENLLQRNREDLLGR 420 Query: 155 SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEI 214 ++ F R +R + E ++ L + + + Sbjct: 421 VCWEEFKETAGTTFDREYHRALMENRTVTFEEFYV------PLDEWFEVHAYPSEEGLTV 474 Query: 215 FLICSGTDITEERRAQE-------RLRILA 237 + DITE + +++ R+R A Sbjct: 475 Y----FRDITERKESEQARQEAHVRIRQQA 500 >UniRef50_Q087W4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q087W4_SHEFN Length = 1144 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 184/658 (27%), Positives = 319/658 (48%), Gaps = 12/658 (1%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMS 67 L + L + + L + A I E I + ++ Sbjct: 483 NQASEKLYGYTKEQALGKKLEDLIIPPPYREHVINNVN------AWINEGVPILAEELLL 536 Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL 127 D S+++V+ IN + + + Q + ++ ++++ Sbjct: 537 QRADGSNVAVYSSHTLINNTDNEAEMYCIDIDLSAQKKAEEQALTLSQAIEQSPISMILT 596 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 + I+ N E +G +VIGQS L S + + +G+A++ EL Sbjct: 597 NIDSKIEYVNSAFEKISGYAASEVIGQSASML-KSGLTPKSLYKQLWDAISTGHAWQGEL 655 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPN 247 G + + + + D+T+ ++ +E++ A+ DS+TGLPN Sbjct: 656 QNRKKNGDIFWEHAHIAPIFDNAGVTKHYLALKQDVTQYKQQEEKILHQAHYDSLTGLPN 715 Query: 248 RNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLE 305 R D + + A N V V++LDLD+FKKVND GH GD+LL ++ + + + Sbjct: 716 RLLSLDRLSQMLKDAHRAKNNVAVLFLDLDDFKKVNDTMGHSVGDELLIQAAVRLKNTIR 775 Query: 306 HDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSP 364 V+ R GGDEF+++ SN ++ +E +AS++L + PFR+ E+ ++ S+GIAL P Sbjct: 776 ESDVVGRLGGDEFIIILSNINEPIEVEIIASKLLEQFYQPFRLENRELVSTISIGIALYP 835 Query: 365 EHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVI 424 D ++R AD+AMY +K+ GR + +T +MN + L ++ LR AL+ + + Sbjct: 836 LDSEDPKELLRQADSAMYHSKDRGRNTYNFYTHQMNHDMDRRLKIEEQLRSALKQKEFEV 895 Query: 425 HYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQV 483 ++QP + + + EAL+RW + G + P +FI AE++GLIV +G++VI Sbjct: 896 YFQPFVDIKSRKIIGAEALLRWNNALLGQVTPDEFIPIAEQTGLIVSIGQYVIEVAFATA 955 Query: 484 AKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDEL 542 KW+ ++A+N+S +Q + T L L + I++E+TE L+ +D + Sbjct: 956 KKWQQTYNPYFKIAINVSPKQFRENTFVDMLNIQLDKHQIHASTIELEITEGVLLSSDAV 1015 Query: 543 ALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRA 602 S + + +G + +DDFGTGYSSLS L +P + +K+D+ F+ DI P LV A Sbjct: 1016 IDSNLISINDIGVSISMDDFGTGYSSLSYLRSYPFNTLKVDKSFINDITVDPGDLELVGA 1075 Query: 603 IVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 +A+ LNL V+AEGVE+ ++ L + QG+LF+KP+P AFE + K Sbjct: 1076 AIAMGHGLNLTVVAEGVETEEQYHLLNALKCDYGQGYLFSKPLPQAAFEALLLKQAKN 1133 Score = 84.2 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 29/260 (11%), Positives = 76/260 (29%), Gaps = 31/260 (11%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 ES + + + + + S ++A+Q I + L Sbjct: 358 ESNQSFADMTGYTLDELFNKPIGDIETSENHQFSTQNI--ITAKQVKAIHYTSQHKHKLG 415 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + V++ + + + L S + +I Sbjct: 416 YLF-----HVEVNISFWDGDDGMFFCFIKDISQRINAEQKLLLSESKFRHIFENIP-SIS 469 Query: 126 I--LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 + D ++ +N+ E G + +G+ + L + N + G Sbjct: 470 VQGYDKNRSVIFWNQASEKLYGYTKEQALGKKLEDLIIPPPYREHVINNVNAWINEGVPI 529 Query: 184 -EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 EL + G + ++ + + + + C D++ +++A+E+ ++ Sbjct: 530 LAEELLLQRADGSNVAVYSSHTLINNTDNEAEMY-CIDIDLSAQKKAEEQ--------AL 580 Query: 243 TGLPNRNAMQDLIDHAINHA 262 T + AI + Sbjct: 581 T-----------LSQAIEQS 589 Score = 83.4 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 1/130 (0%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 L + + ++ I + G N+ + L D+ ++ + LF R++ Sbjct: 203 LETEKNLLQSIIDGIPDIIFYKSADGVYLGCNKAFSEALKLNPEDIKHKTDYDLF-DRQQ 261 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 A + + +R + + E WI T G +K S + ++ D+ + Sbjct: 262 ADSFIKADRFVLQENQPWMDEEWITTPDGIAHIFKTHKTPFVDSSGDIQGIVGVSRDMAD 321 Query: 226 ERRAQERLRI 235 + +E+LR Sbjct: 322 RKLIEEQLRR 331 Score = 82.6 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 45/147 (30%), Gaps = 5/147 (3%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 + G + D + L S ++S A VI+ G I N+ D TG Sbjct: 310 QGIVGVSRDMADRKLIEEQLRRSESTYRNIISTAQDGFVIVSVDGKIIESNQSFADMTGY 369 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 ++ + + + S N + + A G + N Sbjct: 370 TLDELFNKPIGDIETSENHQ--FSTQNIITAKQVKAIHYTSQHKHKLGYLFHVEVNISFW 427 Query: 207 SGSGKNEIFLICSGTDITEERRAQERL 233 G C DI++ A+++L Sbjct: 428 DGDDGM---FFCFIKDISQRINAEQKL 451 >UniRef50_Q1LBF7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=Q1LBF7_RALME Length = 839 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 183/575 (31%), Positives = 290/575 (50%), Gaps = 6/575 (1%) Query: 84 INKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDY 143 I +A H+ R ++ L A++V +++ D G I++ N Sbjct: 254 IEHEYVHELRTALHERDEALRRSNYHLRLADRVFESTLDGVMVTDLNGVIEQVNPAFTQL 313 Query: 144 TGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNK 203 TG + IG++ L S R+ + + R+ ++ E+W G+ + Sbjct: 314 TGYTLDEAIGRTPRML-SSGRQGPSFYQEMWSQLRAQGHWKGEIWNRRKNGELYLEHLSV 372 Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD 263 +DIT R A+ERL LA D +T LPNR + + AI A Sbjct: 373 SSICNQAGECTHYAAIFSDITHRRIAEERLNHLAMHDPLTDLPNRTLFSERLKQAIIRAR 432 Query: 264 NNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVL 321 VGV++LDLD FK +ND GH GD LR +++ + + +AR GGDEF ++ Sbjct: 433 RASRRVGVLFLDLDRFKMINDTMGHGTGDDALRVIAMRLKHAVRESDTVARLGGDEFTIV 492 Query: 322 ASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 + +A +L + P V+ + S+GI++ P+ G+D ++ AD A Sbjct: 493 VEEIEDIRHVAHIAQVLLDVVGQPIDAAGRSVFVTPSIGISIYPDDGTDQQQLLMQADRA 552 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSL 439 MY AK+ G+ F F +M E + L+ LR+AL + +HYQP G + S+ Sbjct: 553 MYEAKQEGKNTFRFFATQMTSSAMESMALECELRRALTRREFRLHYQPIYDLGSGRIVSV 612 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVN 498 EAL+RWQ P RGL+ P FI AEES L+VP+G WV+ + RQ A W G R++VN Sbjct: 613 EALLRWQHPTRGLLSPGAFIDVAEESALVVPIGAWVLREACRQGAAWLRSGFEFGRMSVN 672 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 +SARQ+ + + VL + + + +EL ES + + + V+ + ++ G + Sbjct: 673 LSARQIRHEHFLHDVSDVLSDAGMQPEHLQLELVESMAMTGNGVTELVLGELARRGVGLA 732 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 +DDFGTGYSS + L P+D +K+D+ F+ + ++ +++RAIVA+A+AL L V+AEG Sbjct: 733 IDDFGTGYSSFTYLQTLPVDTVKVDRSFLTAVIERERDGAILRAIVAMARALGLTVVAEG 792 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 VE+ + FL + G + QGFL A+P PA A Sbjct: 793 VENIAQLQFLREIGCDRAQGFLLARPGPAEALTAL 827 >UniRef50_Q31M30 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31M30_SYNE7 Length = 917 Score = 821 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 213/670 (31%), Positives = 329/670 (49%), Gaps = 26/670 (3%) Query: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI 60 + V++S T + L NP + +L AEQ + Sbjct: 250 LSLVQDSETRFQVLIESNP-------NGILVLDEQGAV---LFANHVAEQVFDQSLSELQ 299 Query: 61 TSSLMMSLTVD--------ESDLSVHLVGRKINKREWAGNAS--AWHDTPAVARDLSHGL 110 L + LT++ + D S+ V I W + + A + L Sbjct: 300 GKYLGLPLTLNVTVQLDLVQPDGSLRYVEVSIVPIPWQQSKAYLALLTDITSLQQTQQRL 359 Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 ++ + ++I+I + G I+ N E TG +VIG++ L S + + Sbjct: 360 KLLQEATENSPASILITSAEGIIEYVNPAFELMTGYGADEVIGKNPRFL-KSGLMSPSFY 418 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 ++ +G + EL+ G+ + + I + DITE++R + Sbjct: 419 QDLWETITAGETWRGELYNRRKTGELFWDRTSISPVKDLAGQIIHFVAVKEDITEQKRNR 478 Query: 231 ERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLF 288 E L AN DS+T LPNR+ D + A ++ + V V+ LDLD FK +ND GH + Sbjct: 479 ELLDHQANYDSLTDLPNRSLALDRLRQATALSERSNDTVIVMLLDLDRFKNINDTLGHSY 538 Query: 289 GDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRI 347 GD LL++++ + L + ++R GGDEFL++ ++ LE ++ ++L + P I Sbjct: 539 GDCLLQEIAKRLRYHLPREITISRLGGDEFLIICPAVKENIHLEKLSQQLLKIISQPITI 598 Query: 348 GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYL 407 E+ + S+G+A P G ++R+ADTAMY+AK G F +F P MN + Sbjct: 599 EAEELVITASIGVACYPNDGVTPEVLMRNADTAMYSAKRNGGNDFQLFMPTMNAEAHARI 658 Query: 408 WLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESG 466 L+T+LR ALE QL + YQP I+ V LEAL RW PE G IPP FI AEE+G Sbjct: 659 QLETHLRHALEQYQLKVFYQPIISLQDNHVVGLEALARWHDPELGNIPPDRFIPIAEETG 718 Query: 467 LIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 LI+PLG VI + VA W+ K VAVN+S RQL ++LQ NF Sbjct: 719 LIIPLGYRVIEQACQDVAIWQQKYNYPFWVAVNLSPRQLRSNRFTQITAKILQRHNFRPN 778 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 + +E+TE L++N ++ + G + LDDFGTGYS+LS L R+P ++K+DQ Sbjct: 779 YLKLEVTEQMLLDNTSTIAQMLDTLHRKGIALALDDFGTGYSALSYLRRYPFQSLKVDQS 838 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 F+RDI S +LV+ IVA+A L +Q +AEGVE+A++ FL G QG+ F++P+ Sbjct: 839 FLRDIPHSTESCALVKTIVAMAHGLGMQAVAEGVETAEQVEFLKAIGCEYGQGYWFSRPL 898 Query: 646 PAVAFERWYK 655 PAV + + Sbjct: 899 PAVEIDSFLA 908 Score = 63.4 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 22/178 (12%), Positives = 50/178 (28%), Gaps = 24/178 (13%) Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDL---SHGLSFAEQVVS 118 + + H + E D L + + ++ Sbjct: 206 WDFPVKTAHSDRWFECHCLLHHDETGELLSLVGNIRDITEEHHILSLVQDSETRFQVLIE 265 Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 + I++LD +G + N + E ++ G+ + Sbjct: 266 SNPNGILVLDEQGAVLFANHVAEQVFDQSLSELQGK---------------YLGLPLTLN 310 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 V+L + G ++ + + TDIT ++ Q+RL++L Sbjct: 311 VT----VQLDLVQPDGSLRYVEVSIVPIPWQQSKA--YLALLTDITSLQQTQQRLKLL 362 >UniRef50_B9ZJP5 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJP5_9GAMM Length = 1092 Score = 820 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 188/664 (28%), Positives = 313/664 (47%), Gaps = 16/664 (2%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + + ++P + D L E + L +A QA ++ Sbjct: 429 RGWERVNPFLAQMLGYSPEELVRTDWDRLAVP--EDRSCEAPLD-AAMQAGERDGYSIEK 485 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 L V +D+ V + A + R+ A V Sbjct: 486 RLLRRDGRVLVADIDVKCTRTADGAID---RVVATIEDITERREQEERRRLASVVFENTR 542 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 +VI D+ +I NR + G + +V+G++ R + A N R + Sbjct: 543 EGVVITDATAHILSVNRAFTELMGYTQDEVVGRTPKMFQSGRHDQA-FYANMRRQLETEG 601 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDS 241 ++ E+W G+ ++ + DI+ + ++ L LA+ D Sbjct: 602 HWQGEIWNRRKTGEIFPELQSITAVRDDQGRLTHYVSVFADISRLKASEAELDFLAHHDP 661 Query: 242 ITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLA 299 +T LPNR ++ + AI + ++ +D+D FK +ND+ GH GD+LL+ V+ Sbjct: 662 LTELPNRRLLRARLAQAIALMRRRNGLLAILIIDVDRFKDINDSRGHAAGDRLLKIVADR 721 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRI-GLIEVYTSCS 357 + + +AR DEF VLA N + +A IL + P + +E + + Sbjct: 722 LQAGQRGTDTVARLASDEFAVLADNLAHVDDAALVAEDILREVGRPVDLGDGVEFEIAAT 781 Query: 358 VGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKAL 417 +GIA+ P+HG+D+ +++ A TA+ AKE GRG + ++ + E + L+ LR+A+ Sbjct: 782 IGIAVFPDHGADAETLLQQAGTALSRAKEDGRGGYRYYSDAFTEAARERIDLNARLRRAI 841 Query: 418 ENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVI 476 E D L +HYQP+ G + EAL+RW PE G + P FI AE++GLIV LG WV+ Sbjct: 842 EQDSLEVHYQPQYRVSDGVLIGAEALLRWTDPELGPVSPGRFIPVAEQTGLIVELGDWVL 901 Query: 477 LDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESC 535 V+ Q WRD G +R+AVN+SA Q I + +L+ + +++E+TES Sbjct: 902 RRVLAQGQAWRDAGYPAVRLAVNVSALQFQRVAIDHQVADLLEGHGYPAKYLELEITESA 961 Query: 536 LIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI---HK 592 L+ + E A ++Q+ + G +DDFGTGYSS++QL RFP+D +K+D+ FV + Sbjct: 962 LMSDPERARRILQRLRERGVSFAVDDFGTGYSSMAQLKRFPVDTLKVDKSFVDGLAAGAH 1021 Query: 593 QPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 +S+ RAIVA+ L L V+AEGVE+ ++ L + G + QG+L ++P+PA F Sbjct: 1022 DADDRSIARAIVALGHGLGLSVLAEGVETREQLGALRELGCDHYQGYLASRPLPAEHFAA 1081 Query: 653 WYKR 656 Sbjct: 1082 LLAE 1085 >UniRef50_A6T0F0 Sensory box/GGDEF family protein n=2 Tax=Oxalobacteraceae RepID=A6T0F0_JANMA Length = 699 Score = 820 bits (2120), Expect = 0.0, Method: Composition-based stats. Identities = 199/654 (30%), Positives = 316/654 (48%), Gaps = 16/654 (2%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDES 73 L + L S S + T PD + +R + + D S Sbjct: 51 LTGYTEEDLLFNSR----VSYDQITHPDDRRHVRDTILEAVRNNRRFDIEYRI-VRADGS 105 Query: 74 DLSVHLVGRKINKRE-----WAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD 128 V G I+ G + L + A I Sbjct: 106 IRHVWERGTNISHDNKAWDILEGFIQDVTERKQADEALREAERRYRSIFENAIEGIYQST 165 Query: 129 SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL-FMSRREAAASRRNNRVFFRSGNAYEVEL 187 N G + ++ + + R+ + G E Sbjct: 166 PSDGYLAVNPALARMYGYDSPQALISTLRDIDNQVYVDPQRRLEFKRLMAKHGVVTNFES 225 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPN 247 + G+ +++ N S +F + ITE + + ++ A D++TGLPN Sbjct: 226 RVHRRNGEVIWISENARSVYNSDGTLLFFEGTVEAITERKLHEAEIQFQATHDALTGLPN 285 Query: 248 RNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLE 305 R + D + A+ H++ + +LDLD FK +ND+ GH GD+LL+ + + SCL Sbjct: 286 RTLLYDRMQQAVLHSERYGKLTAIAFLDLDQFKFINDSLGHQVGDELLKITAQRLTSCLR 345 Query: 306 HDQVLARPGGDEFLVLASNTSQSAL-EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSP 364 +AR GGDEF++L ++ R+L + P++ +E +CS+G+ L P Sbjct: 346 ESDTVARQGGDEFVLLLTDQPNEEAITHTMQRVLHEVSQPWKANDLEFQITCSIGLTLCP 405 Query: 365 EHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVI 424 + G D+ ++++AD+AMY AKE GR F F+ EMN V + L L LR+A+ N+ V+ Sbjct: 406 DDGRDAETLLKNADSAMYKAKELGRNNFQYFSAEMNSSVTDRLELLNRLRQAITNEDFVL 465 Query: 425 HYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQV 483 HYQPK++ ++ EALVRW S G++ P FI AEE+GLI+PLG WV+ RQ Sbjct: 466 HYQPKVSLASHQIIGAEALVRWNSAHSGMVSPASFIPLAEETGLIIPLGEWVLRTACRQN 525 Query: 484 AKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDEL 542 W+D G + ++VN+S RQLA I ++++L E E +++E+TES + + E Sbjct: 526 RAWQDAGYPPIPISVNLSPRQLARGDIVEVVERILTETGLEAQHLELEITESVMTTDVEK 585 Query: 543 ALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRA 602 + +++ Q LG ++ LDDFGTGYSSLS L RFP+D +K+DQ FVRDI S ++V+A Sbjct: 586 SFALLTQLRSLGVKISLDDFGTGYSSLSYLKRFPVDTLKIDQSFVRDIATDQDSAAIVKA 645 Query: 603 IVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 I+++ + LNL V+AEG+E+ + FL NG +E QG+L +KP+P F + Sbjct: 646 IISLGRNLNLTVLAEGIETEDQFQFLLANGCDEGQGYLMSKPVPNKNFVDLLTQ 699 Score = 60.3 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 6/131 (4%) Query: 109 GLSFAEQVVSEAHSAIVI---LDSRGNIQRFNRLCEDYTGLKEHDVI--GQSVFKLFMSR 163 +++ +V LD+ ++ + C TG E D++ + + Sbjct: 15 QARLLSTLLANL-EGMVYRCRLDAHWTMEFVSEGCFALTGYTEEDLLFNSRVSYDQITHP 73 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 + R R+ +++E I G ++ S K L D+ Sbjct: 74 DDRRHVRDTILEAVRNNRRFDIEYRIVRADGSIRHVWERGTNISHDNKAWDILEGFIQDV 133 Query: 224 TEERRAQERLR 234 TE ++A E LR Sbjct: 134 TERKQADEALR 144 >UniRef50_Q0ACK6 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACK6_ALHEH Length = 857 Score = 819 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 187/610 (30%), Positives = 305/610 (50%), Gaps = 11/610 (1%) Query: 59 VITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHD-------TPAVARDLSHGLS 111 + S + + + ++ L RE + A T L Sbjct: 242 AVESYFGVPIRRADGTITGLLALMHDQPREISATERAVIALFAARAGTELARHQAEEQLQ 301 Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 +QV + AI+I D++ I + N E +G +E +++G++ L S + R Sbjct: 302 LIDQVFEGSRDAIIITDAQTRILQVNPAFEAISGYREEELVGRTPR-LLQSGHQGPRFYR 360 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 +S ++ ELW G+ + + I +DIT + A++ Sbjct: 361 EMWEALKSRGHWQGELWNRRADGETYPSLLSVSAVTNDNDEVTHYIGIASDITSHKAAEQ 420 Query: 232 RLRILANTDSITGLPNRNAMQDLIDHAINHADN-NKVGVVYLDLDNFKKVNDAYGHLFGD 290 + LA+ D++TGL NR +++ ++ + +A + +LDLD FK +ND GH GD Sbjct: 421 HIDYLAHYDTLTGLGNRRLLEEELERMLRNARGGRPFALFFLDLDRFKNINDTLGHESGD 480 Query: 291 QLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLI 350 +LL +V+ + L R GGDEF +LA S +A +++ + P+ I Sbjct: 481 RLLEEVADRLRDLAGPQATLCRIGGDEFAILAPGLSHRQTAGIARQLVEGISRPYEITER 540 Query: 351 EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLD 410 + +CSVG+A+ P G+ A+I ADTA++ K G + P M E L L+ Sbjct: 541 PLVVTCSVGVAVHPRDGTRREALISAADTALHYVKAHGSNHYQFHEPGMTAAAAERLHLE 600 Query: 411 TNLRKALENDQLVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIV 469 +LR+AL + ++YQP + V EAL+RW PE GLIPP FI AEE+GLI Sbjct: 601 NDLREALLRGEFELYYQPVLDTERLTVCGAEALLRWHHPEAGLIPPDRFIPLAEETGLIR 660 Query: 470 PLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPID 528 P+G WV+ + Q A+WR G+ + V+VN+S Q + A++Q L+ + Sbjct: 661 PIGTWVLREACAQAARWRRLGLTGMTVSVNVSGEQFWRDELPQAVRQALEAQALAPDALV 720 Query: 529 VELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVR 588 +E+TES L+ + +++ +G + LDDFGTGYSSLS L RFPID +K+D+ FVR Sbjct: 721 LEITESVLMHGSANTETRLRELKAMGVGLSLDDFGTGYSSLSYLKRFPIDTLKIDKSFVR 780 Query: 589 DIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAV 648 D+ + ++L + ++A+ L LQV+AEGVESA+ L + + QG+ F++P+PA Sbjct: 781 DMVRDEHDRTLAQTVIAMGHGLGLQVVAEGVESAEHLPLLRRARCDRVQGYHFSRPLPAR 840 Query: 649 AFERWYKRYL 658 A RW +++ Sbjct: 841 ALSRWIQQHQ 850 Score = 48.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 10/136 (7%) Query: 113 AEQVVSEAHSAIVILDSRG---NIQRFNRLCEDYTGLKEHDVIG--QSVFKLFMSRREAA 167 +V+ + + L G + E+ G D + Q + Sbjct: 21 LHRVLEASPAVTYALTRDGQSLRPVYISAHIEELLGYPVADWMADPQFWRQCLHPDDRER 80 Query: 168 ASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEER 227 ++ R + E + G ++ + + DIT Sbjct: 81 VLAQSARHLPE--GLVDHEYRVRHRDGSYRWVHDRLRLMPARDGRPAMAVGVWQDITHRA 138 Query: 228 RAQERLRILANTDSIT 243 RA LR L++ +T Sbjct: 139 RADRLLRTLSH---LT 151 >UniRef50_C5V122 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V122_9PROT Length = 995 Score = 818 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 186/643 (28%), Positives = 294/643 (45%), Gaps = 58/643 (9%) Query: 47 SAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDL 106 S E + +T +L S E + +++ + RD Sbjct: 375 SDEIGTLAQNFNRMTENLQFSYRSLEGRVDERTRELQVSNEQLQEEIIEREHIEKALRDA 434 Query: 107 SHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREA 166 L A H AI+I D+R NI R N+ +D TG +V+G++ L +++ Sbjct: 435 QEYLRIAATTFE-THEAILITDARANIIRVNQAFQDTTGYCAEEVLGKNPRFLSSGCQDS 493 Query: 167 AASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEE 226 A + +G + ELW G + +DI+E Sbjct: 494 AFYVEMWQQLVANG-TWSGELWDRHKDGHIYPKNLTITAVKNILGETTEYVSIFSDISER 552 Query: 227 RRAQERLRILANTDSITGLPNRNAMQDLIDH---------------AINHADNNKVGVVY 271 +RA+E +R LA D +T +++ + V++ Sbjct: 553 KRAEEEIRNLAFYDVLT-------------QLPNRRLLLDRLHLALSVSARSGSYGAVLF 599 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-- 329 LD+D FK++ND GH GD LL +V+ I C+ +AR GGDEF++L ++A Sbjct: 600 LDMDRFKRLNDTLGHGCGDLLLIEVAERIRFCVREVDTVARFGGDEFVILLEEVGKNADE 659 Query: 330 ----LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAK 385 +A +I L +P++I E ++S S+G+ L +G+ +++HAD AMY AK Sbjct: 660 ASKKAALIAEKIRAALSVPYKIKEHEYHSSPSIGVNLYCGNGNAVEDLLKHADMAMYEAK 719 Query: 386 EGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQP----------KITWRGE 435 E GR F P M V E L+ +L +A+ P ++ Sbjct: 720 ESGRNAVRFFDPVMQHSVSERASLEADLHRAV----------PDQQLQLYYQIQVDSNQR 769 Query: 436 VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NL 493 EAL+RW P RG++ P FI AEES LI+ LG WV+ RQ+A W + + +L Sbjct: 770 SLGAEALLRWIHPTRGMVSPAQFIPLAEESILILELGDWVLDAACRQLAIWSEADLMRHL 829 Query: 494 RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQL 553 +AVN+S +Q + + ++LQ + + +ELTES ++ + +S +Q L Sbjct: 830 TLAVNVSGKQFKQRDFVEKVARILQVHQVDASRLKLELTESVVLNDVTDVISKMQALKAL 889 Query: 554 GAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQ 613 ++ +DDFGTGYSSLS L + P+D IK+DQ FVRD+ +V+ I+ +A+ L Sbjct: 890 RVRLSMDDFGTGYSSLSYLKQLPLDQIKIDQSFVRDMTFDQNDAVMVQTIIDMAKNFGLN 949 Query: 614 VIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 VIAEGVE+ + L + G QG+LF+KP+P FE K Sbjct: 950 VIAEGVETEAQKLLLEQLGCLNYQGYLFSKPLPIAQFEALLKE 992 >UniRef50_Q2RRN9 Sensor protein n=3 Tax=Proteobacteria RepID=Q2RRN9_RHORT Length = 1301 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 205/657 (31%), Positives = 325/657 (49%), Gaps = 15/657 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + + P LT S + T PD + A + + Sbjct: 651 RVNHKLCDIVGYPPDELLT-------LSFQDITHPDDLRADLRQMEALLAGQIDTYTIEK 703 Query: 66 MSLTVDESDLSVHLVGRKINK-REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 + L ++L + + + ++ L A V S + I Sbjct: 704 RYIRKTGESLWINLTVSLVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGI 763 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 + D +G+I N T + +V+G++ L R+ + + ++ Sbjct: 764 FVTDLKGSILAVNPAFSQITLYEAAEVLGRNARILQSGRQNREFYVALWQDVL-TIGSWR 822 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ + + I +D++ + ++ + LA+ D +TG Sbjct: 823 GEIWNRRRDGEVFPEWLSISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTG 882 Query: 245 LPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR ++ +DHAI A + V++LDLD FK +ND+ GH GD LLR + + + Sbjct: 883 LPNRLLLRSRLDHAIERARRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTA 942 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRI-GLIEVYTSCSVGI 360 CL LAR GGDEF+ + + A+ +A +L RLR P R+ EV SVGI Sbjct: 943 CLGDTGTLARLGGDEFVAVIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGI 1002 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 +L PE G + +++HADTA+ K G G + +T + +R+ L L+ LR ALE Sbjct: 1003 SLFPEDGDNPDTLLQHADTALGQVKGAGGGAYGFYTRTLTERISARLGLEAGLRHALEQG 1062 Query: 421 QLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 ++HYQP I GEV +EALVRW + LIPP FI AE++GLIVPLG WV+ + Sbjct: 1063 DFLLHYQPLIALGTGEVEGVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEA 1122 Query: 480 VRQVAKWRDKGINLRV-AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 R + +WR +G+ L V AVN+S RQ D I +++VL++ +++E+TES ++E Sbjct: 1123 CRTMQRWRSQGMPLTVLAVNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIME 1182 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 A + + LG ++ +DDFGTGYSSL+ L RFPID IK+DQ FVRDI + ++ Sbjct: 1183 QGAAAEAQMTGLKHLGVRLAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEE 1242 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 + I+A+ + L L V+AEGVE+ + FL++ + QG+LF++P+ A A E+W Sbjct: 1243 ITATIIAMGRTLKLHVLAEGVETTDQLDFLSRKQCDSAQGYLFSRPITAAALEKWLA 1299 Score = 98.8 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 49/172 (28%) Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 + M + + +L A D L + +A Sbjct: 578 ADEAMRARMLRGVVQDYLFKPFSRLELLARADGLIADHRRKQMVLRESEARFRATFEQAA 637 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 I LD G+ R N D G +++ S + A R+ + + Sbjct: 638 VGIAHLDPDGHWLRVNHKLCDIVGYPPDELLTLSFQDITHPDDLRADLRQMEALLAGQID 697 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 Y +E G+ L++ + + I +I + A+ +L Sbjct: 698 TYTIEKRYIRKTGESLWINLTVSLVRDIHNAPAYFISVVENIQSRKEAELQL 749 Score = 43.0 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 16/128 (12%) Query: 113 AEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR-- 170 E + +ILD+ I N T + +++G+ +F++F S Sbjct: 28 FEAIFRALPGPHLILDADLKIAAVNDAYLQATLTRRGEILGRGIFEVFPDNPNDPVSEGV 87 Query: 171 RNNRVFF------RSGNAYEVELWIPTCKGQ-------RLFLFRNKFVHSGSGKNEIFLI 217 RN R R+ + ++ + G R + N G+ ++++ Sbjct: 88 RNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGAGDFELRYWSPIN-TPVLGADGAVVYIV 146 Query: 218 CSGTDITE 225 D+TE Sbjct: 147 HYAQDLTE 154 >UniRef50_C6CDP3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dickeya dadantii Ech703 RepID=C6CDP3_DICDC Length = 685 Score = 818 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 193/655 (29%), Positives = 303/655 (46%), Gaps = 18/655 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 Y + + L S ++ + + +R + E + + Sbjct: 35 VNPAYCNIYGYTQQEMLHRSFTMVFPPEAQGSVLERHQRFLDE-------GGKLGGEWTV 87 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 + D + L+V + + + + + A V +H AI + Sbjct: 88 T-RRDGTLLTVWSESVPFAQAGHKADRLVYVLDISERKKTHEQQQIAAAVYDASHEAIFV 146 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D+ NI N TG DV G++ SR + + E Sbjct: 147 TDADNNIISVNPAFSRLTGYHFDDVNGKNPRMFKSSRH-PPSFYAEMWHALHEKGLWIGE 205 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 +W G V + + I + +DIT ++ +E + AN D+IT LP Sbjct: 206 VWDRHKNGHDYLKELTVTVIRDAAGHIINHVGMFSDITLRKKQEELIWRQANYDAITDLP 265 Query: 247 NRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR+ Q ++ A HA N + ++ +DLD+FK VND+ GH GD LL VS ++ + Sbjct: 266 NRHLFQSKLEQAAQHARRTGNLMALMLIDLDHFKAVNDSMGHRAGDMLLTRVSQRLIDSV 325 Query: 305 EHDQVL-ARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 +H + AR GGDEF V+ S+ +A+A +L L PF I ++ S S+GIA Sbjct: 326 QHADTIIARLGGDEFAVIISDLFQPHDCDALAKALLENLSHPFNIDGENMFVSASIGIAC 385 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 P + A+ ++AD AMY AK GR F ++P ++ L + +LRKA+ +Q Sbjct: 386 FPTDSDNLEALFKNADQAMYAAKNAGRNGFSYYSPALHDAARTRLRMTNDLRKAIREEQF 445 Query: 423 VIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 ++YQP + G + EALVRW P GL+ P +FI AEE+G+I+PLG WV + Sbjct: 446 EVYYQPIVALDTGHITKAEALVRWHHPTHGLVSPAEFIPLAEETGIIIPLGNWVARQAIA 505 Query: 482 QVAKWRDKGIN-LRVAVNISARQLADQTIFTA-LKQVLQELNFEYCPIDVELTESCLIEN 539 Q+A+WR ++ +N+S QL Q + L I +E+TE L+ Sbjct: 506 QLARWRQFCDPRFQMTINLSPIQLRSQDFADMDWLRELDRHGLSGDAIAIEITEGLLLNA 565 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 + + F G Q+ +DDFGTGYSSL+ L RF ID +K+D+ F+ D+ V L Sbjct: 566 EPRVNRNLHMFRDAGIQIAIDDFGTGYSSLAYLRRFNIDYLKIDRSFIEDM--DGVGHEL 623 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 AIVA+A +L LQV+AEGVE+ ++ A L + G + QGFLF++P A + Sbjct: 624 CVAIVAMAHSLGLQVVAEGVETLQQSAMLKRIGCDYAQGFLFSRPQSAADITQLL 678 Score = 84.9 bits (210), Expect = 1e-14, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 52/133 (39%), Gaps = 5/133 (3%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 S + ++ I ++D GN N + G + +++ +S +F + + Sbjct: 10 SLFQAILDRCPVGIAVIDYSGNYLTVNPAYCNIYGYTQQEMLHRSFTMVFPPEAQGSVLE 69 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 R+ + F G E + G L ++ + +G L+ DI+E ++ Sbjct: 70 RH-QRFLDEGGKLGGEWTVTRRDGTLLTVWSESVPFAQAGHKADRLVYVL-DISERKKTH 127 Query: 231 ERLRILAN--TDS 241 E+ + +A D+ Sbjct: 128 EQ-QQIAAAVYDA 139 >UniRef50_C5V294 Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V294_9PROT Length = 1157 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 178/561 (31%), Positives = 283/561 (50%), Gaps = 12/561 (2%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 + L + A + + D+ G IQR N TG +VIGQ+ L S + Sbjct: 588 RAAADLRVSATAFD-AQEGMFVTDAEGVIQRVNNAFTQLTGYSASEVIGQTPR-LLSSGQ 645 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 A + E+W G+ + + + DI+ Sbjct: 646 HDAVFYALMWQSINETGKWAGEIWNRRKNGEIYPEYLAITAVKDESGVVNNYVATFNDIS 705 Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVND 282 + + A +++LA D++TGLPNR + D + A+ + ++ +DLDNFK +N+ Sbjct: 706 DSKAATNEIQLLAFYDALTGLPNRRLLLDRLLQALASSVRSNRMGALLLIDLDNFKTLNE 765 Query: 283 AYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL------EAMASR 336 GH GD LLR V+ + +C+ + +AR GGDEF+V+ + +A + Sbjct: 766 TMGHDIGDLLLRQVAERLTACVRNGDTVARLGGDEFIVMLEEIGAQTVDSVTHTTTIAEK 825 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 IL L LP+R+ E +++ S+G L + +++ D AMY AK+ GR F Sbjct: 826 ILNSLNLPYRLEKHECHSTPSIGATLFSGTQQSADELMKQVDIAMYQAKQAGRNGLRFFD 885 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPL 456 +M + L+ +LR AL N + +HYQ ++ G E L+RW P+RG++ P Sbjct: 886 SKMQDAISARASLEADLRVALINSEFQLHYQIQVNSLGAALGAEVLIRWMHPQRGMVSPA 945 Query: 457 DFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALK 514 FI AEESGLI+P+G WV+ Q+ W+D + L +AVN+S++Q +K Sbjct: 946 QFIPLAEESGLILPVGEWVLKTACHQLKVWQDNALTRELTLAVNVSSKQFRQAEFVELVK 1005 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 + LQ + +ELTES L+EN + ++ + + +G +DDFGTGYSSL + R Sbjct: 1006 KTLQSSGANPSLLKLELTESLLLENIDEIIAKMNELKLMGIHFSIDDFGTGYSSLQYIKR 1065 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 P+D +K+DQ FVRDI ++V+ I+A++ AL L VIAEGVE+ ++ AFL +G + Sbjct: 1066 LPLDQLKIDQSFVRDIMDDNNDAAIVQTIIAMSDALGLNVIAEGVETREQRAFLDSHGCH 1125 Query: 635 ERQGFLFAKPMPAVAFERWYK 655 QG+LF+KP+P FE Sbjct: 1126 TFQGYLFSKPIPLEQFEILLA 1146 >UniRef50_A4G3M6 Putative two-component response regulator n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G3M6_HERAR Length = 818 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 210/632 (33%), Positives = 328/632 (51%), Gaps = 17/632 (2%) Query: 35 TETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESD---LSVHLVGRKINKREWAG 91 TE + +L +A ++ T + +MS+ S LVG + + G Sbjct: 185 TELVPLEVAYKLREMEARVLKAGTALQELEVMSMPSGASYWLSTKFPLVGENSDSQHVGG 244 Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD---SRGNIQRFNRLCEDYTGLKE 148 A + L + + + IVI+D + N E TG Sbjct: 245 IAIDI----TERMKVEQDLLLRTRAIEACVNPIVIVDTATPGMPLIYVNGAFETITGYSS 300 Query: 149 HDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSG 208 + IG++ L R R V L G S Sbjct: 301 EEAIGRNCKFL-QGMDTDQPELGKLRAAIREQRPASVLLRNYHKDGSMFLNELYIAPVSD 359 Query: 209 -SGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK- 266 SG + D+T+ +R QE L AN D++TGL NRN + + A+ A + Sbjct: 360 TSGGAVGHFVGVLYDVTQIKRYQEDLEHQANYDTLTGLANRNLLNERTQQALLQARRHDH 419 Query: 267 -VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT 325 + +V++DLDNFK VND+ GH GD+L+ +V + +C+ +AR GGDEF++L +N Sbjct: 420 FLSLVFIDLDNFKLVNDSMGHGAGDELIANVGSRLQTCVRDGDTVARIGGDEFVLLLTNQ 479 Query: 326 SQSAL-EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 S S + RI L P I E+ +CS+G+A PE G DS +++ +ADTAMY A Sbjct: 480 SVSDSNAGVMQRIQAELIKPMWIRGQEIVVTCSMGVARFPEDGEDSESLLANADTAMYRA 539 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALV 443 K GR F +T EMN E L L+++L AL+ND+L + YQP+I R G V +EAL+ Sbjct: 540 KSSGRNNFQFYTKEMNATSGERLSLESDLWHALKNDELFLVYQPQIDLRDGTVIGMEALI 599 Query: 444 RWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISAR 502 RWQ P+RGLI P+DFI AE +GLI+P+G WV+ R + + +G+ +RVA+N+SAR Sbjct: 600 RWQHPKRGLIAPMDFIPMAECNGLIIPIGIWVLETACRHNLQLQKEGLPPIRVAINLSAR 659 Query: 503 QLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDF 562 QL+D+ +++ V++ + + +++E+TES ++ N E + + +++G Q+ LDDF Sbjct: 660 QLSDRNFVESVQSVIEAIGLDPHYLELEVTESMVMHNVEDVVVTLNDLNKMGIQLSLDDF 719 Query: 563 GTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESA 622 GTG+SSL+ L RFPID +K+DQ F+ + P + + I+A+A L ++VIAEGVE + Sbjct: 720 GTGFSSLAYLKRFPIDRLKIDQSFIFNCDSDPGDAIIAQTIIALAHGLKIKVIAEGVEKS 779 Query: 623 KEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 + +FL KNG +E QG+ ++P+ + Sbjct: 780 EHLSFLKKNGCDEGQGYFISRPLTFDDLRMFL 811 Score = 53.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 42/150 (28%), Gaps = 14/150 (9%) Query: 92 NASAWHDTPAVARDLSHGLS----FAEQVVSEAHSAIVILDSRGNIQRFN----RLCEDY 143 A + R + L + A I D G N + Sbjct: 116 RAMEHVEQRDARRRIETELLESNLMFRTFMENLPGAAFIKDQDGRYLYCNHGLDKAFNVE 175 Query: 144 TGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNK 203 G IG+ +L A R ++G A + + G +L K Sbjct: 176 KGCS----IGKLDTELVPLE-VAYKLREMEARVLKAGTALQELEVMSMPSGASYWLS-TK 229 Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERL 233 F G + + DITE + ++ L Sbjct: 230 FPLVGENSDSQHVGGIAIDITERMKVEQDL 259 >UniRef50_A4ACX6 Sensory box/GGDEF/EAL family protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACX6_9GAMM Length = 793 Score = 816 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 182/662 (27%), Positives = 307/662 (46%), Gaps = 20/662 (3%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 +R + + + + H ++ L P+ AE +++ + Sbjct: 145 IRLTNSAWQLVLGHGDAELQGQNLLDL-------VHPEDREATLAEMG----KLSQGMYT 193 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 L D S ++ E A + GL A V + Sbjct: 194 LYFENRYRHRDGSYRVIAWSAATAERESVICAVGRDISQEHAARRGLFQAAAVFKNSGEG 253 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 I+I D G I+ N TG D IGQ L R + + + + Sbjct: 254 ILISDKDGRIRDVNAAFSRITGYSREDAIGQPTSLLRSGRHDGD-FYADMWQTLQRDGVW 312 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E+W G G + TDI++ + +E+L+ LA+ D +T Sbjct: 313 RGEIWNRRKSGTVFPELLTISKIDGPDG---GFMAIFTDISQLKETEEQLQKLAHYDPLT 369 Query: 244 GLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 LPNR + + ++H+I A + V +LD+D+FK +ND+ GH GD+LL+ + + Sbjct: 370 NLPNRFLVNECLEHSIRRAQRRSDHLAVFFLDIDSFKNINDSLGHFAGDKLLKTTANRLK 429 Query: 302 SCLEHDQVLARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI 360 + L D + R GGDEFL++ + S +A +I+ LR P + + S S+GI Sbjct: 430 ALLRDDDSVGRIGGDEFLMVLDDISTPDDATHIAEKIIGALRKPMILEGRSISVSASIGI 489 Query: 361 ALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND 420 ++ PE G + ++ +AD AMY AK+ GR F ++ + ++ F+ + +D+ LR+A+ Sbjct: 490 SIYPEDGQTAETLMSNADAAMYNAKDQGRDTFRFYSEHLTRQAFQNVLIDSALREAVSRQ 549 Query: 421 QLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDV 479 + + +QP++ G + LE L+RW G + P FI AE +GLI +G WV+ Sbjct: 550 EFRLAFQPQVNTDNGSLLGLEVLLRWHHLTLGTVSPSQFIPQAERTGLIRDIGHWVLEQS 609 Query: 480 VRQVAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIE 538 Q ++W +G+ +AVN+SA Q + +++VL + F +++ELTES L+ Sbjct: 610 CLQGSRWIAEGLQFGHLAVNVSAPQFRAEDFVAQVRKVLADTEFPPEKLELELTESVLVH 669 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 + E + + + LG +DDFGTGYSSLS L R PID +KLD+ FV I + Sbjct: 670 DTEKLIENMHELRALGVMFAIDDFGTGYSSLSYLKRMPIDRLKLDKSFVDHIVSDDSDRI 729 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 + A++A+ +A+ L VIAEG+E + L G QG+L+ +PM E + +L Sbjct: 730 IAGAVLALGKAMGLPVIAEGIEQEAQARVLQSLGCKHFQGYLYGRPMYGPRIEVVLRAHL 789 Query: 659 KR 660 ++ Sbjct: 790 EK 791 Score = 48.7 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 11/174 (6%) Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI- 124 +L D +GR + + +A + + + + + + Sbjct: 80 RALLDDGDIRWYRAIGRSYASPDASVTHAAGVLLDVTTQRSAEQY--YDAFFQQ-PNGMH 136 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 ++ G I+ N + G + ++ GQ++ L A ++ Y Sbjct: 137 LVASIDGEIRLTNSAWQLVLGHGDAELQGQNLLDLVHPEDREATLAEMGKLSQGMYTLY- 195 Query: 185 VELWIPTCKGQ-RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 E G R+ + S + G DI++E A+ L A Sbjct: 196 FENRYRHRDGSYRVIAWSAATAERESV-----ICAVGRDISQEHAARRGLFQAA 244 >UniRef50_A3Q8W6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Shewanella RepID=A3Q8W6_SHELP Length = 1094 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 196/614 (31%), Positives = 318/614 (51%), Gaps = 8/614 (1%) Query: 54 IREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA 113 + + ++ + + + L + E A A A + + ++ + LS A Sbjct: 476 VNNLVTRIGTIASLMQRMAQNTQLQLSVPVDGRDEVAKMAMALNAMLSERQEANRELSLA 535 Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN 173 V IV+ D I+ N TG +V G+S L ++ Sbjct: 536 SAVFEYCAEGIVVTDKDNLIEAVNPAFTQITGYTLEEVKGRSPAVLNS-HQQPHHFYEQM 594 Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + ++ E+W GQ + V + I DI+ ++ ++ + Sbjct: 595 WQSLKQYGKWQGEIWNKRKNGQIFPEYLAITVVKDDKGRVVQHIGLFLDISNRKKYEQDI 654 Query: 234 RILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQ 291 +N D++T LPNR + + A+ V V+++DLD FK +ND YGH GD+ Sbjct: 655 WYKSNYDALTNLPNRQLYTSRLSQMLQLAEQRCCSVAVLFIDLDRFKYINDIYGHAVGDE 714 Query: 292 LLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLI 350 LL+ + + + LE +AR GDEF+V+ +T +E A IL L PF I Sbjct: 715 LLQVAAARLEALLEQHDFVARLSGDEFVVVMGHTKHQGEIEQRAQNILQHLSSPFGINRN 774 Query: 351 EVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLD 410 E+ S SVGI+ P +G+ + R+A+TAMY AK+ GR F F+P+MN + + L+ Sbjct: 775 ELLISASVGISCYPSNGTSVEVLTRNAETAMYQAKQDGRNCFGYFSPDMNNNMLARITLE 834 Query: 411 TNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIV 469 +LR A+ + +HYQP + GE +LEAL+RW+ P+RGL+PP +FI AEE+GLI Sbjct: 835 QSLRSAVLQHEFCLHYQPIVDTSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEETGLIE 894 Query: 470 PLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT---IFTALKQVLQELNFEYCP 526 P+G WVI +R + + +GI + +A+N+S RQLA L +LQ+ + Sbjct: 895 PIGEWVIQQALRDLRQCHSQGIMINMAINVSGRQLAHGDPSHFACMLNGLLQKYDVAPQY 954 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 + +E+TES L+ + EL+L + LG +++LDDFGTGYSSLS L +FPI IK+D+ F Sbjct: 955 VHIEITESILMADTELSLKALTAIRHLGVEIYLDDFGTGYSSLSYLKQFPISVIKIDKSF 1014 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 V ++ + +L++AI+ + Q+L+++++AEGVES + +FL G + QG+L AKPMP Sbjct: 1015 VDNMLEDRADANLIKAIITMGQSLDMRLVAEGVESEPQRSFLQGLGCDFVQGYLVAKPMP 1074 Query: 647 AVAFERWYKRYLKR 660 E +R ++ Sbjct: 1075 LKELEPLLRRIVRE 1088 >UniRef50_Q21WZ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21WZ5_RHOFD Length = 1353 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 187/671 (27%), Positives = 308/671 (45%), Gaps = 23/671 (3%) Query: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVI 60 ++ + + G+ + ++ L + AR+R +T Sbjct: 678 LRIIYLNPAAIAMFGARTAQELVGKALLDLIHPDSHQVAT-----------ARVRHITNT 726 Query: 61 TSSLMM----SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQV 116 + + L +D + + V + I A +A+ D + + L A V Sbjct: 727 GHAAPLIDEKYLRLDGTPIDVEVQSTSIIYEGLAAIRTAFRD-ISERKLAHDKLQLAANV 785 Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 S A I I D+R I N TG +V+GQ+ L R++ A Sbjct: 786 FSHAREGIAITDARATIIDVNEAFCRITGYSRDEVLGQNPRVLGSGRQDKA-FYAAMWHD 844 Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 + E+W G+ + +DI+ + Q L + Sbjct: 845 LGEQGHWYGEIWNRRKNGELYPEMLTISAVRTDQGQVQNYVALFSDISAIKAHQHELEHI 904 Query: 237 ANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLR 294 A+ D++T LPNR + D + A+ A + + YLDLD FK +ND +GH GD LL Sbjct: 905 AHFDALTNLPNRVLLADRLQQAMAQAQRRGQMLALAYLDLDGFKAINDRHGHEAGDLLLM 964 Query: 295 DVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASRILTRLRLPFRIGLIEVY 353 V+ + L LAR GGDEF+ + + S S A M SR+L P R+G + + Sbjct: 965 TVATRMKQTLREGDTLARIGGDEFVAVLLDLSDSKASAPMLSRLLAAAAEPVRLGDLALQ 1024 Query: 354 TSCSVGIALSPE-HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTN 412 S S+G+ P+ ++ ++R AD AMY AK G+ ++ F ++ + Sbjct: 1025 VSASLGVTFYPQVDEMEADQLLRQADQAMYQAKLAGKNRYHFFDAAQDRSARGHHESLER 1084 Query: 413 LRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPL 471 +R+AL+ + V++YQPK+ G V EAL+RWQ PE+GL+ P F+ E+ L V + Sbjct: 1085 IRQALDRREFVLYYQPKVNMRTGAVIGAEALIRWQHPEKGLLAPALFLPVIEDHPLAVDI 1144 Query: 472 GRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQEL-NFEYCPIDVE 530 G WVI + Q W+ G+++ ++VN+ ARQL L+++L + +++E Sbjct: 1145 GEWVIATALIQNELWQADGLDMPISVNVGARQLQQADFVPRLRELLAAQPGVKPFQLEIE 1204 Query: 531 LTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI 590 + E+ +E+ I++ ++G LDDFGTGYSSL+ L R +D +K+DQ FVRD+ Sbjct: 1205 VLETSALEDWVGVSQSIEECREMGVLFALDDFGTGYSSLTYLKRLQVDLLKIDQSFVRDM 1264 Query: 591 HKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 P ++++ ++ +A A VIAEGVE+ L + G + QGF A+PMPA F Sbjct: 1265 LDDPDDMAILQGVIGLAGAFRRNVIAEGVETIAHGTLLLQLGCDLGQGFGIARPMPADLF 1324 Query: 651 ERWYKRYLKRA 661 W + + A Sbjct: 1325 PAWAASWQRDA 1335 Score = 73.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 43/122 (35%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 L + +Q++ + +AI ++DS+G I + N+ + G +IG L Sbjct: 360 HLHQRETLLKQILDTSSAAIFVIDSQGRITQANQRMAEMFGCPLDTLIGHDYVSLVHPAE 419 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 + + ++ ++E + + ++ + TDIT Sbjct: 420 RNVGQQNMLALLANKVSSSDLERLYWRADESEFWGHLACRGFHDASTHQHCFVGVITDIT 479 Query: 225 EE 226 E Sbjct: 480 ER 481 Score = 73.4 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 69/215 (32%), Gaps = 7/215 (3%) Query: 28 DVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESD---LSVHLVGRKI 84 V+ R +L+A I SSL L S Sbjct: 573 RVIVSDIATHVYWQRYKELAARADLGACWSQPILSSLGQVLGTFASYHHTTHTPTSAEIA 632 Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + +A A+ + A A+ + ++ E+ +AI++ I N Sbjct: 633 SVERFARIAAIVIEGQAAAKKMRDSEERFRTLIEESPAAILVH-RELRIIYLNPAAIAMF 691 Query: 145 G-LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNK 203 G +++G+++ L A+ R + A ++ G + + Sbjct: 692 GARTAQELVGKALLDLIHPDSHQVATARVRHITNTGHAAPLIDEKYLRLDGTPIDVEVQS 751 Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 G I + DI+E + A ++L++ AN Sbjct: 752 TSIIYEGLAAIR--TAFRDISERKLAHDKLQLAAN 784 >UniRef50_Q21WZ6 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=Q21WZ6_RHOFD Length = 1355 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 181/660 (27%), Positives = 318/660 (48%), Gaps = 6/660 (0%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 + L + ++ ++ + + A AA + + Sbjct: 420 FTYVSPSVEKLRGFTSAEVMQQTLAQTLCPSSIPVATEALGKSMASMAAGLPFIGFRGEL 479 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 + G + + ++ G + L A QV ++ Sbjct: 480 EQPCKDGSTVWTEISTNGMRNEQGDFVGIV-GVSRNITERKAQQQQLQLAAQVFAQGREG 538 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 I + D+RG+I NR + TG + +V+GQ+ L S R++ + + + Sbjct: 539 ITVTDARGHIIMVNRAFSEITGYTQAEVLGQNPRIL-KSERQSPEFYLDMWTALTTSGHW 597 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E+W G + S + S +D++ + A+ R++ L+ D++T Sbjct: 598 AGEMWNRKKDGTVYPEWMAISALRDSQGLTTHYVASFSDLSTAKAAESRIQWLSQFDTLT 657 Query: 244 GLPNRNAMQDL--IDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 GLPNR +QD + ++ + ++ + +D+F VND GH GD+LL +++ + Sbjct: 658 GLPNRTLLQDRTALALSMVQRAREPLTMLLVAIDHFGAVNDTLGHQLGDELLVEMARRLS 717 Query: 302 SCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 + ++R GG EF+++ T +A+ +L +L P +G+ E+ + S+GIA Sbjct: 718 DSVREQDTVSRMGGKEFVLVLPGTPAMGAAHLATELLWKLSRPCSLGMHELTLTASIGIA 777 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 P++G+D + + + AM+ A+ GR + ++ +M ++V + L LR+A+ DQ Sbjct: 778 SFPDNGADFDTLFKAVEIAMHRAQLKGRDTYQFYSDDMYEQVLAHDRLIKALRQAIVLDQ 837 Query: 422 LVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 L + YQP++ G++ +EAL+RWQ PE G + P FI AEESGLI+ +G WV+ Sbjct: 838 LQLVYQPQVDLQTGQICGVEALLRWQHPELGAVSPGQFIPLAEESGLIIGIGEWVLRRAC 897 Query: 481 RQVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 + + +W D GI + VA+N S Q D + +K L E + I +E+TES L+++ Sbjct: 898 QDIRRWLDHGIKVPHVAINASPLQFRDNNLVLQVKAALTESQIDPALIYIEVTESALMDD 957 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 ++++ LG ++ LDDFGTGYSSLS L RFP D +K+DQ FVRDI L Sbjct: 958 VPRNEAMLKALKDLGIKLSLDDFGTGYSSLSYLKRFPFDQVKIDQSFVRDIATSQSDSLL 1017 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 V+ IV++A L ++VIAEGVE+ + + + +E QG+ F KP+ A A E + + Sbjct: 1018 VKVIVSMAHGLGMKVIAEGVETEAQCEIMRTSICDEIQGYFFCKPISAQAIEELFSEGRQ 1077 Score = 87.6 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 58/203 (28%), Gaps = 5/203 (2%) Query: 30 LRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREW 89 + + + L Q R+ + VI L+ + + + R Sbjct: 317 VVINDYASVMGKHGLPEGHAQLDRLINVPVIDGGLVRMMAGVGNKPEPYTEADVETVRLI 376 Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEH 149 A L + A I +D +G + E G Sbjct: 377 ADAVWRIVRQRRAETALHESEQRHRLLADNASDVIWTMDLKGRFTYVSPSVEKLRGFTSA 436 Query: 150 DVIGQSVFKLF--MSRREAAASRRNNRVFFRSGNA---YEVELWIPTCKGQRLFLFRNKF 204 +V+ Q++ + S A + + +G + EL P G ++ + Sbjct: 437 EVMQQTLAQTLCPSSIPVATEALGKSMASMAAGLPFIGFRGELEQPCKDGSTVWTEISTN 496 Query: 205 VHSGSGKNEIFLICSGTDITEER 227 + + ++ +ITE + Sbjct: 497 GMRNEQGDFVGIVGVSRNITERK 519 Score = 84.2 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 42/136 (30%), Gaps = 2/136 (1%) Query: 98 DTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVF 157 + ++ + AI D G FN G +G Sbjct: 90 REQEAQAENHRSQQLLTALIDSSTDAIFAKDLAGRYLLFNHETTRVMGTTPERALGHDDT 149 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 LF + A R N++ E + T G+R+F K S I L Sbjct: 150 ALFPPEQ-AELIRANDQRVLALNRTTSYEETLETVDGERVF-LATKGPLRDSNGQVIGLF 207 Query: 218 CSGTDITEERRAQERL 233 DIT+ +R + RL Sbjct: 208 GISRDITDRKRDETRL 223 >UniRef50_B7GKR7 Multidomain signal transduction protein (Contains PAS, GGDEF and EAL domains) n=2 Tax=Bacillaceae RepID=B7GKR7_ANOFW Length = 594 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 175/552 (31%), Positives = 291/552 (52%), Gaps = 6/552 (1%) Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAAS 169 LS A ++ EA I++ DS G+I N E TG + +V+G+ L + Sbjct: 38 LSIAHTIIQEADEGIIVTDSEGHILLANPAFETVTGYTQEEVLGKKPNILRSGLHDRK-F 96 Query: 170 RRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA 229 N R ++ E+W G+ + N + +D+T+ +R Sbjct: 97 YENMWETIRDHGVWKGEIWNKRKNGELFVEWLTIKAVYDVAGNPTHYVAIFSDVTQHKRT 156 Query: 230 QERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHL 287 E+L L+N D +T +PNR + H ++ A ++ +++LDLD FK +ND GH Sbjct: 157 MEQLARLSNYDLLTNVPNRQLFTKRLQHLLDTARRYNQQLAILFLDLDRFKYINDELGHY 216 Query: 288 FGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFR 346 GD LL+ V+ + L LAR GGDEF+V+ ++A +I+ L+ PF Sbjct: 217 SGDILLQKVANRLKKLLRTKDTLARIGGDEFVVILPKLKDIQEAVSIAEQIIESLQAPFL 276 Query: 347 IGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEY 406 + ++Y S S+GI++ P G D ++R AD AM AKE GR +F ++T +++ + E Sbjct: 277 LHHKDIYISASIGISVYPNDGDDGEMLLRRADRAMQKAKESGRNRFELYTAKLDYQS-EV 335 Query: 407 LWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEES 465 + L+ LRKA+E ++L + YQP + ++ +LEAL+RW+ P G + P FI AEE+ Sbjct: 336 VTLENYLRKAIERNELFVCYQPIVNIKTKKIEALEALMRWKQPNIGFVSPAQFIPLAEET 395 Query: 466 GLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYC 525 GLIVP+ +W+ + ++++ +NISA L ++++ + Sbjct: 396 GLIVPMTKWLFEQACVHIKAIHQFAPHVKIGINISAVHFQQDDFVQQLSTIVKKHDVHPR 455 Query: 526 PIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQV 585 +ELTES ++ N E ++ + Q Q G ++ +DDFGTG+SSLS L RFPID +K+DQ Sbjct: 456 FFKLELTESTIMPNAEESVQKLVQLKQCGFKLAIDDFGTGFSSLSYLHRFPIDILKIDQS 515 Query: 586 FVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPM 645 F+R + ++V I+ +A L+L V+AEGVE+ ++ FL K + QG+ AKPM Sbjct: 516 FIRRLSLYSDDATIVSTIIMMAHHLHLSVVAEGVETEQQYEFLNKQQCDMAQGYYIAKPM 575 Query: 646 PAVAFERWYKRY 657 P +++ + + Sbjct: 576 PIDEVQQFVQEW 587 >UniRef50_B8GM77 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GM77_THISH Length = 759 Score = 814 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 199/642 (30%), Positives = 323/642 (50%), Gaps = 7/642 (1%) Query: 25 ESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKI 84 ++ + L R L I++ + ++ VD L + + Sbjct: 105 QAREWLFGDLDAQMLIGRPLAELCPCDREIQQQVMSGRGRGQTIEVDGRHLQIIVSDITD 164 Query: 85 NKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + D + L +V I I DSR + N T Sbjct: 165 AHQNSIKKVVICFDVTQ-QKKTEASLGLYGKVFESTAEGIAITDSRMRFLQVNEAYCRIT 223 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G + +++G++ L S AA + + E+ T G+ + L + Sbjct: 224 GYSDGELLGRTPRML-KSGHHDAAFYADISKTLEVRGHWRGEILDRTRDGRVIPLLQTIS 282 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN 264 V + I TDI+ + Q RL LA+ D +T LPNR ++HAI+ A Sbjct: 283 VVRDTQGAVSHYITIVTDISSIKETQSRLDFLAHHDPLTELPNRLLFTARLEHAIDWAVR 342 Query: 265 NK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 N+ G++++DLD FK +ND+ GH GD+LL V+ + + +AR GGDEF+VL Sbjct: 343 NQAHFGLLFIDLDRFKTINDSLGHQLGDRLLVQVARRLRGLVRKSDTIARLGGDEFVVLV 402 Query: 323 SNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 + E +A +++ +R PF + E++ CS+GI L PE G D ++++AD AM Sbjct: 403 EGIHNAGEAELLAEKLVHAMRQPFFLEETELHIGCSIGITLYPEDGEDPVTLLKNADAAM 462 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLE 440 Y K+ GR FC F+ ++ + V E L L+T LR+AL +QL +HYQP I +G + ++E Sbjct: 463 YRVKDFGRDGFCKFSQDLAEAVDERLALETALRQALRENQLQVHYQPVIDLAQGRMVAVE 522 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNI 499 AL RW+ ERG I P FI AEE+ LI+PLG W+ + Q WR++G+ L V++N Sbjct: 523 ALARWRHAERGEIAPCSFIRLAEETKLILPLGGWMARTAIGQFRLWRERGMELDYVSINT 582 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 S +L D L + L E E + +ELTE+ L+++ E V+ + Q G ++ + Sbjct: 583 SGIELFDPGFVDGLFEALDEHGLEGRHLQIELTENVLMQDYEACRRVLLRLRQQGVRIAI 642 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSL+ L + PID +K+D+ F++D+ P ++V I+A+A L L +AEGV Sbjct: 643 DDFGTGYSSLAYLKQLPIDMLKIDRSFIKDVPGDPGDCAIVETIIAMAHRLGLATVAEGV 702 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 E+ +++ +L G QG+ +A+P+ V+ ER + +++A Sbjct: 703 ETEEQEDYLLAIGCERLQGYRYARPLDPVSLERLHADSVRQA 744 Score = 52.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 17/186 (9%) Query: 50 QAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHG 109 A+I +M + +L + + + L I + S HDT Sbjct: 19 IRAKIDQMLTLIGTLPLRPEELDDRTLIDLDPIGIVSDAFGQILSHLHDTNQKLDVARQE 78 Query: 110 LSFAEQVVSEAHSAIVILDSRGNIQRFNR-LCEDYTG-LKEHDVIGQSVFKLFMSRREAA 167 + + +A+V+++ G+I NR E G L +IG+ + +L RE Sbjct: 79 IR---AIFDSMDAAVVVVNHDGSIDDCNRQAREWLFGDLDAQMLIGRPLAELCPCDREIQ 135 Query: 168 ASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEER 227 +V G +E+ L + + +N I + D+T+++ Sbjct: 136 Q-----QVMSGRGRGQTIEVDGRH-------LQIIVSDITDAHQNSIKKVVICFDVTQQK 183 Query: 228 RAQERL 233 + + L Sbjct: 184 KTEASL 189 >UniRef50_A1S8A3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8A3_SHEAM Length = 751 Score = 814 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 188/636 (29%), Positives = 313/636 (49%), Gaps = 7/636 (1%) Query: 26 SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKIN 85 S + PDR + + ++E I + + ++D+ ++ + + + Sbjct: 115 SPAQILSRKDAEVFPDRVSEYTDTDLKAVKEGHPIVVAECIDRSLDKGNIWLETIKAPMY 174 Query: 86 KREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYT 144 + A + L +V A ++I DS G I N E T Sbjct: 175 DMDGRLLGVIGTTRDIARYKAAEEQLFLTSKVFENAIEGVMITDSNGIITEINGAFETIT 234 Query: 145 GLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 G +VIG++ L R E N ++ + E+W G + Sbjct: 235 GYSRDEVIGKTPKLLNSGRHERDFF-ENLWRALKTQGHWHGEIWNRRKNGTLFAEQTSIS 293 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN 264 G + +DI+ ++ + + LA D +T LPNR+ + + I A N Sbjct: 294 AVYGEDGQVRCFVAVFSDISLLKQTEAEVAQLAWHDPLTRLPNRSKLTTISQQQIKLAAN 353 Query: 265 N--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 ++ ++ +D+D FK +ND++GHL GD++L +S + + L + LAR GGDEF++L Sbjct: 354 RKTRLALLLIDVDLFKHINDSFGHLAGDKVLLSLSERLAALLGAEDTLARIGGDEFVLLT 413 Query: 323 SNTSQSALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAM 381 + + + S I F V S S+GIA+ P+ G + ++++AD AM Sbjct: 414 QVRRRDDIPVILSAIQRAFDTSFDTSEGESVRLSASIGIAVYPDDGDNPDTLLKNADAAM 473 Query: 382 YTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGE-VRSLE 440 Y AK+ GR + +T +M Q + L L T LR A++N L + YQPKI R + +E Sbjct: 474 YRAKQQGRNRHAFYTEQMTQSSMQQLRLQTALRGAVKNSALSLVYQPKINLRTRKLIGVE 533 Query: 441 ALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNI 499 AL RW E G++ P +FI AE GL+ +G WV+ + RQ WRD+G+ R+AVN+ Sbjct: 534 ALCRWTDHELGVVSPAEFIPVAESIGLMPEIGLWVLKEACRQARIWRDQGLNPGRMAVNV 593 Query: 500 SARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHL 559 S QL ++ +VL + +++E+TES +++N A+ + + +G + L Sbjct: 594 SGSQLTGDNFADSVARVLTQTGLSPDALELEITESVVLDNPASAIDTMDKLRGMGVSLAL 653 Query: 560 DDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGV 619 DDFGTGYSSLS L + P++ +K+DQ FVR++ S ++ AI+A+ +AL L VIAEGV Sbjct: 654 DDFGTGYSSLSYLRKLPLNKLKIDQSFVRELPTDQDSGAIAMAIIAMGEALKLGVIAEGV 713 Query: 620 ESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 E+ + FL + G E QG+LFA+P+ A ++ + Sbjct: 714 ENETQAEFLLRLGCTEAQGYLFARPLLASELKQLLQ 749 Score = 57.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 40/122 (32%), Gaps = 1/122 (0%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 + + I I D+ G + N+ L ++ + ++F R + + Sbjct: 80 LLQSFMDAFDEHIWIKDAEGRYRFINQSTLVSWDLSPAQILSRKDAEVFP-DRVSEYTDT 138 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 + + E + ++L K + +I + DI + A+E Sbjct: 139 DLKAVKEGHPIVVAECIDRSLDKGNIWLETIKAPMYDMDGRLLGVIGTTRDIARYKAAEE 198 Query: 232 RL 233 +L Sbjct: 199 QL 200 >UniRef50_Q2SF23 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF23_HAHCH Length = 637 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 184/607 (30%), Positives = 330/607 (54%), Gaps = 13/607 (2%) Query: 56 EMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQ 115 E ++ ++ +L++ + + + R+ A A H+ + L Sbjct: 33 EGESLSWPILTTLSI-AVIFAFLSLIQIRLNRQLAAKVKALHERDFKLKKL-------SS 84 Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 V+ + +I+I D G I+ N + TG + + G+ + L +A + Sbjct: 85 AVTNSGCSIIITDRLGRIEFVNNKFVNVTGYGQEEARGRFLDILNPKDMDAEKPQEQIWE 144 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + +E E+ G + S + SG D++E + A +++ Sbjct: 145 SDILYDGWEGEVLSRRRDGYDFWWAVTVSTVCDSDNTVTNYVISGVDVSELKEANRKMQQ 204 Query: 236 LANTDSITGLPNRNAMQDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLL 293 +A DS+TGL NR D ++ A+ A D ++ +++LDLD FK++ND GH GD LL Sbjct: 205 MALYDSLTGLANRRLFVDRLEQAVKAASRDRKQIALLFLDLDQFKRINDTLGHDAGDSLL 264 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEV 352 + V+ + +C+ +AR GGDEF VL ++ + ++ +A++IL L+ P ++ EV Sbjct: 265 QTVAQRLKNCVRAKDTVARLGGDEFTVLLTDIVDTFSVTPVATQILKALKEPIKLKKHEV 324 Query: 353 YTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTN 412 S S+G+ L+P G+++ ++++AD A+Y AKE GR ++ +T E+N + L ++ Sbjct: 325 IVSTSIGVTLAPTDGANADVLMKNADLALYRAKEHGRDRYHFYTEELNAHALKQLLMEQE 384 Query: 413 LRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPL 471 LR AL+ ++ + +QP++ G++ S+EAL+RW P +GL+ P FIS AEE+GLI P+ Sbjct: 385 LRHALQFEEFTLGFQPQVNLTTGKIVSVEALIRWHHPSKGLVMPDSFISVAEETGLINPI 444 Query: 472 GRWVILDVVRQVAKWRD-KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVE 530 GRWV+ + Q+ +D G +++AVN+SARQ D + ++++ L E E +++E Sbjct: 445 GRWVLKNACMQMKMLQDLTGSAIKIAVNLSARQFDDPKLEQSIEEALNETGLEPEWLELE 504 Query: 531 LTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI 590 +TES L+ + + + +++ Q G + +DDFG+GYSSLS L + P++A+K+D+ FVRDI Sbjct: 505 VTESMLMGDIQAVTNKLKRLRQTGVSLAIDDFGSGYSSLSYLKKLPVNALKVDREFVRDI 564 Query: 591 HKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 + + AI+AVA L L+V+AEGVE+A++ +L N + QG+ F+KP+ Sbjct: 565 PEDSNDMEITSAIIAVAHKLQLKVVAEGVETAEQKEYLLANQCDFAQGYFFSKPLSFEDL 624 Query: 651 ERWYKRY 657 + + Sbjct: 625 YIYLNEH 631 >UniRef50_A0LA87 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA87_MAGSM Length = 1070 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 186/656 (28%), Positives = 313/656 (47%), Gaps = 13/656 (1%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 S +Y L R S + PD ++ A ++E + Sbjct: 403 WSEEIYRMLH------RPRAHVSASFESYMDHVHPDDRQRVRDMVARVLKEPDLFFRVEH 456 Query: 66 MSLTVDESDLSVHLVGRKINKREWA-GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 + D + +V +G + + L A+ ++ A+ Sbjct: 457 RIVRSDGNVRTVLQLGDVERSASGEPVRMTGTVQDITDLKRTQENLDLAKYILDTTSDAV 516 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 +I D I N TG +V+GQ+ + + A R + + G + Sbjct: 517 IITDVNNRIIDVNHAYTKITGFSRDEVMGQNPQVVHNEEQGEAFYSRIWQSLLQEGR-WS 575 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W G+ + F + DI+ ++ +E++ LA D +T Sbjct: 576 GEVWERRKNGELYPKWMTMRRMLNQYGETAFFVGVFVDISTQKATEEQMERLAYYDPLTK 635 Query: 245 LPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR + + +I A VGVV LDL+ FK +N++YG+ GD LL V+ I+ Sbjct: 636 LPNRALFHERLTQSITTAKRYKRHVGVVMLDLNRFKLINESYGYGVGDGLLIQVAERIVE 695 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 L ++AR G D F + + Q + +A+ +L + +PF + E+ ++GI Sbjct: 696 RLRESDIVARIGADTFAITLVDLKQEGEITGVANNLLKQFVMPFLVNGHELMLRTAMGIV 755 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 L P G D+ ++RH + A+ AK+ G + ++ EM+ + L L+ + ALE Sbjct: 756 LYPTDGQDAETLLRHVENALGQAKQQGVNNYRFYSEEMSNISNKRLALEQEMHTALEQRD 815 Query: 422 LVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 V++YQPK+ RG V +E+L+RWQ ++G+I P++FI AEE+GLIVP+G W++ Sbjct: 816 FVLYYQPKVNLQRGVVSGVESLIRWQHKQKGMISPVEFIPVAEETGLIVPMGLWILETAC 875 Query: 481 RQVAKWRD-KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 + + D G VAVN+SARQ + + ++ + L + ++ E+TES ++ N Sbjct: 876 AEAKRITDYLGQPFTVAVNLSARQFQSRNLLESISETLNNSAIDPSMLEFEITESMMMGN 935 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 E ++ + +G + +DDFGTGYSSLS L RFPI+ +K+DQ F+RD+ ++ Sbjct: 936 VEKSIETLVAIRNMGVTLAIDDFGTGYSSLSYLKRFPINTLKIDQSFIRDLGVDSDDAAI 995 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 V AI+++AQ LNL V+AEG E A++ FL + G QG+ F++P+P ER K Sbjct: 996 VSAIISMAQDLNLHVVAEGAEKAEQVLFLKERGCETVQGYYFSRPLPQTDLERLLK 1051 >UniRef50_Q0A572 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Gammaproteobacteria RepID=Q0A572_ALHEH Length = 840 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 200/637 (31%), Positives = 311/637 (48%), Gaps = 14/637 (2%) Query: 33 STTETTEPDRTLQLSA-EQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKI----NKR 87 + L ++A + R R+M + +++ D + L + + + Sbjct: 197 TPIGHLASRPLLTVAANDMLIRARDMLMDHQVRHLAVLDDRGQVVGLLGFQDLLAGAEQS 256 Query: 88 EWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLK 147 A L AE+V+ + IVI D+ I+ N TG Sbjct: 257 YLKDLRRALEQRDKALAQSRKHLQLAERVIDSSLEGIVITDAHARIEFVNPAFTHLTGYS 316 Query: 148 EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 +V G++ L S R + R + + E+W G + Sbjct: 317 LEEVAGRTPAVL-SSGRHPPSFYREMWQALQEQGYWRGEIWNRRKSGALYLELLTITAIT 375 Query: 208 GSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN-- 265 + TDIT R + ++R LA D +T LPNR + D + AI HA + Sbjct: 376 NDDGDTTHYAGLFTDITHIRENERQIRQLAYYDPLTRLPNRRLLDDRLSLAIKHAHRHRQ 435 Query: 266 KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT 325 ++ V+++DLD+FK+VND GH GD+LL VS + L D LAR GGDEFL L + Sbjct: 436 RLAVMFIDLDHFKQVNDTLGHAVGDELLLRVSERLREHLREDDTLARLGGDEFLALLPDL 495 Query: 326 SQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTA 384 + + R++ + P+ IG + CS+G++L P+ G A+IR+AD AMY + Sbjct: 496 QEVDEAIRVTQRLIEAISQPYTIGDHDFRVGCSIGLSLYPDDGESPDALIRNADGAMYRS 555 Query: 385 KEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ-LVIHYQPKITW-RGEVRSLEAL 442 K GR + ++ PEM+ R L L+T LR E + L IHYQP W G + S EAL Sbjct: 556 KTEGRNTYRLYAPEMDTRAKNQLALETALRDTAETGEGLSIHYQPIFDWRTGALHSAEAL 615 Query: 443 VRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISA 501 +RW P RG + P +FI AE SGLI+PLG+ V+ V Q+ +W+ G+ + VA+N+SA Sbjct: 616 LRWHHPTRGAVAPGEFIPLAERSGLIIPLGQAVMRMVCTQLKRWQAAGLRPVPVAINLSA 675 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 +Q + ++++LQ + + ELTES L+ + E L + +G V +DD Sbjct: 676 KQFWQDELPGFIRKMLQRCDLNPGLMGFELTESTLMHDIERGLDTLAALRGMGCSVAIDD 735 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQP-VSQSLVRAIVAVAQALNLQVIAEGVE 620 FGTGYSSL+ L R P+ +K+D+ FV D+ ++V A+ +A+ L LQV+AEGVE Sbjct: 736 FGTGYSSLTYLQRLPVTTLKIDRSFVSDLGTCRKGGCAIVAAVTGLARELELQVVAEGVE 795 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPAVAF-ERWYKR 656 + + L + + QGF +P+PA AF E + + Sbjct: 796 TEAQLRALDRYQVALVQGFKTGRPVPADAFSEAYLRA 832 >UniRef50_Q478L4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=5 Tax=Proteobacteria RepID=Q478L4_DECAR Length = 1665 Score = 812 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 190/644 (29%), Positives = 301/644 (46%), Gaps = 9/644 (1%) Query: 21 WRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLV 80 L + L+ T P+ Q++ E I ++ S + + + + Sbjct: 888 EDLGYGQNTLKGKTIAAVHPENLRQIAEEVTVDI--ISGRRYSCPLPILCASGEQIMVET 945 Query: 81 GRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLC 140 + + A V AH I+I D +GNI N Sbjct: 946 RVVNGYWDGQPALIGISQDISERLMAEERQQLAASVFDNAHEGIMITDPKGNILEVNATF 1005 Query: 141 EDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLF 200 + TG + +G + L S A R + E+W G+ Sbjct: 1006 TELTGYSRAEALGNTPDML-KSGHHDPAFYEEMWQKIRDDGYWRGEIWNRKKSGEIFVEQ 1064 Query: 201 RNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN 260 + +DIT ++ Q+RL LA+ D++T LPNR + D + A Sbjct: 1065 LTISSVRNRDGALSNFVAIFSDITLLKQHQQRLEHLAHFDALTQLPNRMLLSDRMQLAKA 1124 Query: 261 HADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 A+ + + V YLDLDNFK +ND YGH GD LL +V+ + +C+ +AR GGDEF Sbjct: 1125 QAERSGKTLAVCYLDLDNFKPINDRYGHSVGDFLLIEVAQRLKTCVRAGDTVARLGGDEF 1184 Query: 319 LVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 ++L +N + + +R+++ L PFR+ V S S+G+ L P GSDS ++RHA Sbjct: 1185 VLLITNLDDLNECDHAMTRVISALSQPFRVSAQFVTVSASIGVTLYPHDGSDSDTLLRHA 1244 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEV 436 D +MY AK+ GR ++ +F PE ++R +R+ L N + ++YQPK+ R G Sbjct: 1245 DQSMYAAKQEGRNRYHLFDPENDRRARLRREEIGQIREGLANGEFKLYYQPKVNMREGSF 1304 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRV 495 EAL+RWQ PERGL+ P F+ E S L + +G WVI + ++Q+ W +GI+L V Sbjct: 1305 IGAEALIRWQHPERGLLLPDSFLPALEGSELAIDIGDWVIQEALKQIDAWHRTQGIDLSV 1364 Query: 496 AVNISARQLADQTIFTALKQVLQEL-NFEYCPIDVELTESCLIENDELALSVIQQFSQLG 554 ++NI+ L L ++L N I++E+ E+ +E+ + + + LG Sbjct: 1365 SINIAGIHLQHPGFSRRLGELLAAYPNVTPGQIELEVLETAALEDIQTTAELFAECRNLG 1424 Query: 555 AQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQV 614 LDDFGTGYSSL+ R P D +K+DQ F+R++ ++V ++ + A QV Sbjct: 1425 VTFALDDFGTGYSSLTYFRRLPADMLKIDQSFIRNMLDDTDDLAIVEGVIGLTHAFKRQV 1484 Query: 615 IAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 IAEGVE+ + L G + QGF A+PMP W + + Sbjct: 1485 IAEGVETVEHGLVLLLLGCDMAQGFGIARPMPPEQLPDWIRHFQ 1528 Score = 80.7 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 68/186 (36%), Gaps = 7/186 (3%) Query: 54 IREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA 113 IR +TV+ S ++ + E L L I+ A A A+ + + + Sbjct: 223 IRHLTVVDSDGNLAGLLSEHTLMSPLKLGLIDDALIDRQALA-RAREAMLDETARNERYQ 281 Query: 114 EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNN 173 ++ + + D+ + NR G VIG++ +L+ +A + Sbjct: 282 RALLDNFPFLVWLKDTESRLLTANRAMAKAAG--SDSVIGKTDRELWPPELASAYRADDL 339 Query: 174 RVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE-- 231 V N VE I GQ ++ K + + DI+E +RA+E Sbjct: 340 AVMASRQNKIVVEPIIV--DGQTVWHETYKAPVIADDGTLLGTVGFARDISERKRAEEAM 397 Query: 232 RLRILA 237 +LR A Sbjct: 398 QLRNQA 403 Score = 77.6 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 54/188 (28%), Gaps = 26/188 (13%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS 155 + ++DL L+ + A+ I N E GL +IGQ+ Sbjct: 553 VIERQNSSQDLERSLATFRGIFDSIGEALFIQGEDRRFLDVNTSAEQMFGLSRASLIGQT 612 Query: 156 VFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIF 215 L + +G E + + + S G+ Sbjct: 613 HESLIAPGMLDLEAIDQAISTALAGTPQAFETLARSSTERIFPIEVRLHTASYFGRPV-- 670 Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAIN---HADNNKVGVV-- 270 LI S DI+E + A+ RL D + A+ D ++ Sbjct: 671 LIASAVDISERKNAELRLE--VEHD--------------LAQALASGMQRDEVLGALLKA 714 Query: 271 ---YLDLD 275 + DLD Sbjct: 715 IQRFPDLD 722 Score = 64.9 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 5/170 (2%) Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL 127 LT+ S L ++ + +G S A + + I IL Sbjct: 814 LTLGSRQASGVLPSTLLSLEKLSGQFSQALHRLAAQEEARRLQENLSGLFDTLTDFIFIL 873 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 D G I +NR + G ++ + G+++ + V SG Y L Sbjct: 874 DQAGRILHYNRAVAEDLGYGQNTLKGKTIAAVHPE--NLRQIAEEVTVDIISGRRYSCPL 931 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 I G+++ + LI DI+E A+ER + LA Sbjct: 932 PILCASGEQIMVETRVVNGYW-DGQPA-LIGISQDISERLMAEER-QQLA 978 >UniRef50_B1Y6A9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6A9_LEPCP Length = 898 Score = 812 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 193/597 (32%), Positives = 296/597 (49%), Gaps = 7/597 (1%) Query: 68 LTVDESDLSVHLVGRKINKREWA-GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 +T VHL + + + R + A V + +AI+I Sbjct: 300 VTSGGKMKWVHLRSTTFHGDDGRPLRSVGTVQDITERRQAEDEMRLAASVFDNSLNAILI 359 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D+ G I++ NR TG + +G + L S + ++ ++ E Sbjct: 360 ADANGRIRKVNRAFTAITGYTAEEAVGDTPR-LMKSGLHSPGFYGEMWAELQACGKWDGE 418 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 L G+ + + + + I DITE++ + +R+ LA D +TGLP Sbjct: 419 LMNQCKDGRIISVRESIAAVHDPAGAVAYYIGIFHDITEQKASAQRIHQLAYYDVLTGLP 478 Query: 247 NRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR + D H + A ++ V++LDLD FK +ND+ GH GD LLR V+ + L Sbjct: 479 NRALLMDRCQHELARAMRDGKRLAVLFLDLDRFKHINDSLGHPVGDGLLRAVAQRLQGTL 538 Query: 305 EHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 +AR GGDEF+VL + SA +E A RIL R PF++ + SVGI+L Sbjct: 539 RDSDTIARLGGDEFIVLLEHVETSAGVELAARRILDAFRDPFQLEEHRLSVGASVGISLF 598 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P+H SD T++ ++AD A+Y AK GRG F F P N + + L+ LR+ALE +QL Sbjct: 599 PDHASDITSLFKYADLALYQAKAAGRGDFRFFEPRFNDAAKDRMRLERELRQALERNQLS 658 Query: 424 IHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 + YQP G + EAL+RW P G + P FI AE+SGLIVP+G WV+ RQ Sbjct: 659 LQYQPVFALPDGRLAGAEALLRWTHPALGSVSPATFIPIAEDSGLIVPIGAWVLEQACRQ 718 Query: 483 VAKWRDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 +W D G++ +AVN+S Q+ + + VL C +++E++ES + + E Sbjct: 719 ARQWLDAGLDPGVIAVNLSGMQIQRNDLVDTVSSVLARTGLPACHLELEISESYITRHAE 778 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 L + Q LG + +DDFGTG +SL L R P+ +K+D+ F+ DI + ++ R Sbjct: 779 SDLQRLGQLRALGVSMAIDDFGTGQTSLGHLRRLPVSKLKIDRSFMADIEHDAAAAAVTR 838 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 AI+ + L L V+AEGVESA +++ L + QGF +A+P+ A F R Sbjct: 839 AIIGLGHGLGLTVVAEGVESAAQESALVAQHCDLVQGFRYARPLDAPVFAALCARPQ 895 Score = 45.6 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 63/203 (31%), Gaps = 17/203 (8%) Query: 46 LSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARD 105 L A AA ++L + + + + RD Sbjct: 8 LPAPTAATRCAPLDEAAALRLEIEALRLANAALESQLLAGSEQAESMFVQLERQRNALRD 67 Query: 106 LSHGLS----FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFM 161 FA++V+ ++ LD +G +++ NR C++ G SV L Sbjct: 68 AHGREQALSAFAQRVMDTVGGVVIALDPQGRLRQRNRHCQNDLAPLPE---GSSVDLLLH 124 Query: 162 SRREAAASRRN----NR------VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 + AA + R Y E G + + + Sbjct: 125 PQDLAALEAALPHLPWQVHSVLFETVRRQGGYRAEHQFAMRDGSYRYHLVEAAMLYSAQN 184 Query: 212 NEIFLICSGTDITEERRAQERLR 234 E + SGTDI+E +R ++ LR Sbjct: 185 KEEGAVLSGTDISELKRQEQHLR 207 >UniRef50_C5V2W0 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2W0_9PROT Length = 1275 Score = 812 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 175/566 (30%), Positives = 301/566 (53%), Gaps = 8/566 (1%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 + R L AEQV S + A++I + NI R N+ + TG +VIG++ Sbjct: 574 IHINTIKRQQETELKLAEQVFSRSADAMIITNPDNNIVRVNQAFCEITGYTSEEVIGKNP 633 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 L +++ R+ +++ E+W G+ + + + + Sbjct: 634 RILKSEKQDHDFF-RSLWRSLELQGSWQGEIWNRRKNGEIYPEWSSINAVKDASGRVVNY 692 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDL 274 +D+ +++A L L + D++T LPNR ++D I+ +I HA +GV++L+L Sbjct: 693 FAVFSDL-LQKKALAELDHLKHYDALTDLPNRALLEDRIESSITHARQYERFIGVIFLNL 751 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTS-QSALEAM 333 D+F VND H GDQ+L + ++ ++R D F++ + + + Sbjct: 752 DHFHTVNDMLSHAGGDQVLIATAKRLMDAAPAQASISRLSADTFVIALPDLNTSEEINRT 811 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG-RGQF 392 A I ++ P + V S +GI++ P G+D+T +++HAD A+ AK+ G R F Sbjct: 812 AELIAQKIYQPLTVADQSVQLSARMGISVYPIDGNDATTLMKHADAALADAKQCGVRNSF 871 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG 451 ++ MN+ + L + LR A+ ++LV+HYQP++ G++ EAL+R PERG Sbjct: 872 RFYSSSMNEHAHKLLTMGAELRNAISQNRLVLHYQPQVDIITGQIIGAEALIRINHPERG 931 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR-DKGINLRVAVNISARQLADQTIF 510 +I P +FIS AEE+GLI+P+G WVI + RQ+ +W DK I L +A+N+S QL + Sbjct: 932 IISPGEFISVAEETGLIIPMGTWVIREACRQMQQWHLDKNIELTIAINLSPLQLHQSDLP 991 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 + L + +++E TES +++N ++++ +F +G + +DDFGTGYSSLS Sbjct: 992 EIVSLALHDSGLNARYLELEFTESAIMKNVRETVAIMNKFKAMGLHLSIDDFGTGYSSLS 1051 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L +FP+D +K+DQ FV +I + P ++V+AI+A+ + L + IAEGVE+ + +L Sbjct: 1052 YLKQFPVDKLKIDQSFVSNITQDPNDAAIVQAIIALGRTLGMTTIAEGVETEAQLGYLRS 1111 Query: 631 NGINERQGFLFAKPMPAVAFERWYKR 656 E QG+L++ P+PA F R Sbjct: 1112 VNCKEMQGYLYSAPLPAEEFAALLVR 1137 Score = 53.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 77/238 (32%), Gaps = 9/238 (3%) Query: 7 STTLYNFLGS-HNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + L +P L E T+ + ++ R + ++ Sbjct: 176 TERDIVRLFGQDDPRRVLREVMSKPVAKVARQTQLKDAAKKMQDEGIRRLVVEDDAGQVI 235 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVA--RDLSHGLSFAEQ----VVSE 119 LT + + I + + + A R L+ + ++ ++ Sbjct: 236 GVLTEHDVVKPLEEDYVDILQAIIDSQSIKLNQLQADMLNRQLAESIMAWKRPFLDLLDN 295 Query: 120 AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRS 179 + I D+R N N+ D G+++ ++ G+S + + A R ++ S Sbjct: 296 LPLKVFIKDTRSNYIACNKSYADDLGIQQSEIAGKSDLDFYPASL-AQHYREDDARVIES 354 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + + ++ ++ +K + +I D+T E + + L+ A Sbjct: 355 DQTITM-VGPYLAGSRQTWVQISKSPWHDGRGDIGGVIGIFQDVTHEYQMNKALQRKA 411 >UniRef50_Q47ZI3 Sensory box/GGDEF/EAL/CBS domain protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47ZI3_COLP3 Length = 858 Score = 812 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 187/589 (31%), Positives = 300/589 (50%), Gaps = 6/589 (1%) Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQ 134 LS+ + I R+ L AE+++ + I+I D +G I Sbjct: 260 LSMDNIMSDIELAYVEELHQIVQQRDIALRESKKHLLVAEKIIEASLDGIMITDEQGTII 319 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 N TG KE +V+G + L R + + + ++ E+W Sbjct: 320 SVNPAFTRVTGYKEAEVLGLNSKILSSGRHTSD-FYQQLWLCILEQGVWQGEIWNKRKNS 378 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDL 254 + + S N +DI+E + A++R+ LA D +T LPNR D Sbjct: 379 EIYPQWLTIIEISEGVDNNKVFAAIFSDISERKLAEKRIENLAFYDELTQLPNRRLFFDR 438 Query: 255 IDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLAR 312 +D A+ A NK+ + ++DLD FK+VND YGH GD LLR + + + +AR Sbjct: 439 VDMALAIAHRKNNKMALFFIDLDYFKEVNDNYGHRIGDLLLRSFAKRLTESSKEGDTVAR 498 Query: 313 PGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDST 371 GGDEF +L ++ + + +RI+ +LR P+ I + + S+GIA+ PE G++ Sbjct: 499 IGGDEFTLLLTDMREVDHICKACNRIVEKLRQPYHIEGHALNITTSIGIAVYPEDGTNEE 558 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 ++++AD AMY AK+ GR F +FTP MN E + ++LR AL +++L ++YQ +I Sbjct: 559 ELMKNADIAMYRAKDIGRNSFQLFTPAMNAHSQERSLIQSHLRLALVHNELELNYQAQIH 618 Query: 432 -WRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 G+V +EAL+RW +P G + P FI AEE G I + WV+ +Q W D+G Sbjct: 619 GVTGKVMGVEALLRWYNPILGQVSPAQFIPMAEELGFIAEIDHWVLEHACKQRKLWLDQG 678 Query: 491 INL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 ++ R+AVNISA + +++ VL + ++VE+TE C I+ + A S+++Q Sbjct: 679 LDCGRIAVNISALHFHQGNLVASVESVLAQSQLPAELLEVEITEGCFIKQMDKATSILKQ 738 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 ++G +V LDDFGTG+SSLS L PID +K+D F+ + + AI+ +AQ Sbjct: 739 LKKMGVKVALDDFGTGFSSLSYLTSLPIDTLKIDASFIAKLPHNFRESQITSAIITLAQN 798 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 LNL ++AEGVE+ + FL + G QG+ + KP+ A R + Sbjct: 799 LNLDIVAEGVETEAQKIFLIERGCEIMQGYFYNKPVCAKNLPRVIQSSQ 847 >UniRef50_C5V0L7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0L7_9PROT Length = 951 Score = 811 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 171/601 (28%), Positives = 276/601 (45%), Gaps = 14/601 (2%) Query: 68 LTVDESDLSVHLVGRKINKREWAGNASA-WHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 + D V G E SA + + L A AI++ Sbjct: 339 IMADGRVKWVEARGSNYFDPEGRAIRSAGTVQDVTFREEAATQLRIAAVAFD-TQEAIMV 397 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D NI + N E TG E +V+G++ L R ++ ++ E Sbjct: 398 TDKEANIIKVNHSFELTTGFSEQEVLGKNPRLLGSGRHNQD-FYKSMWEVLNRVGSWSGE 456 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 LW G+ + + DITE ++A+E + LA D +T LP Sbjct: 457 LWDRRKNGEIYPKWLTITAVKNRD-EISHYVGVFVDITERKKAEEEIHNLAFFDPLTQLP 515 Query: 247 NRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR + D + A+ + +K ++++DLD+FK +ND GH +GD++L +VS + L Sbjct: 516 NRRLLLDRMRLALGLSARSKNFGALMFIDLDHFKVLNDTKGHEYGDKMLIEVSHRLTQSL 575 Query: 305 EHDQVLARPGGDEFLVLAS------NTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSV 358 +AR GGDEF+VL + + + ++A ++ L + I ++ S+ Sbjct: 576 RDTDSVARFGGDEFVVLLESLSVNQDIAVAQAGSIAEKMRESLSQTYIIESYAHESTPSI 635 Query: 359 GIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALE 418 G+ L + +++ AD AMY AKE GR F M + ++ LR+AL Sbjct: 636 GVVLFNGDAIEIDELLKRADLAMYQAKESGRNTVRFFESAMQATLESRTLMERALRQALS 695 Query: 419 NDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 N + ++YQ + E+ E L+RW S G I P FI AE++ LI+P+G WV+ + Sbjct: 696 NSEFELYYQVQTNQANELLGAEVLLRWHSQSLGPISPAQFIPLAEQTKLILPIGEWVLEN 755 Query: 479 VVRQVAKWRDKG--INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCL 536 ++ W LR+AVNIS Q ++ L + +++ELTE+ + Sbjct: 756 ACARLKAWETHPTLSKLRLAVNISPVQFHQPDFVRQVQAALTDSGVNPRRLELELTENLV 815 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 +E+ + A+ + LG + +DDFGTGYSSL + R PID +K+DQ FVRDI P Sbjct: 816 LEDVDEAIQKMSALKALGVRFSMDDFGTGYSSLQYIKRLPIDQLKIDQSFVRDILTDPGD 875 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 +V+ I +A+ +VIAEGVE + L + G N QG+ F++P+ FE Sbjct: 876 AMMVQTIAGMARNFGYEVIAEGVEEHAQLLPLIERGCNTFQGYFFSRPVALAEFEHLINH 935 Query: 657 Y 657 + Sbjct: 936 W 936 >UniRef50_C6X7I8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7I8_METSD Length = 821 Score = 811 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 204/649 (31%), Positives = 323/649 (49%), Gaps = 18/649 (2%) Query: 20 YWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHL 79 + + +L P ++ A + + + I L D + Sbjct: 177 EQIIGKHDTLLFP-------PQLAQEMRAAEQQTLAQGEAIQHVRQFPLADDVKLWLLTT 229 Query: 80 VGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD---SRGNIQRF 136 + + R L + + + I+I+D + Sbjct: 230 FPVQDMDGNFNH-IGGIGIDITEQRKAEEALLLRNHAIEASATPILIVDVTQPAMPLIYV 288 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR 196 NR E TG + +G++ L RE + R R L G Sbjct: 289 NRAFELVTGYSSQEAVGRNCRFLQGHDREQPELEK-IRTAIRERCPGYAILRNYRKDGSL 347 Query: 197 LFLFRNKFVHSGSGK-NEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLI 255 + + + DITE R+ QE L AN D++TGL NRN +++ + Sbjct: 348 FWNELYVAPVPDPHGGEPRYFVGVQKDITEIRQYQEALERQANYDTLTGLANRNLLKERM 407 Query: 256 DHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 AI+ A + V ++D+DNFK+VND+ GH GD+L+R + + SCL +AR Sbjct: 408 QQAISEARRHNWTFSVAFIDIDNFKRVNDSMGHSAGDELIRLLGQRLQSCLRDGDTVARL 467 Query: 314 GGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTA 372 GGDEF++L ++ S ++ + RI + PF I ++ +CS+G+A P G ++ Sbjct: 468 GGDEFVLLLTSQSLDESIHTVVQRIRNTIINPFIITGRQLTVTCSIGLANFPHDGRNADT 527 Query: 373 IIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW 432 ++ +AD+AMY AK G F + EMN + L L+ +L ALEN QLV+HYQP++ Sbjct: 528 LLSNADSAMYQAKASGSNNFRFYAKEMNAELGHRLSLENDLWHALENQQLVLHYQPQVCM 587 Query: 433 RG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI 491 R ++ +EAL+RWQ P+ G+IPPL FI +E+ GLIVP+G WV+ Q + + G Sbjct: 588 RNSQIIGMEALIRWQHPKLGMIPPLQFIPLSEDDGLIVPIGIWVMETAAHQNRQLQLAGY 647 Query: 492 N-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQF 550 +RVAVN+S RQL + + +++ LQ + +++E+TES L+ N E ++ + + Sbjct: 648 PPIRVAVNLSVRQLEQKDLVHCIEKTLQHSGLDPQCLELEITESMLMHNIEESIITLNRI 707 Query: 551 SQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQAL 610 S LG Q+ LDDFGTGYSSLS L R PI+ +K+D+ F+ DI + R+I+A+A +L Sbjct: 708 SDLGVQLSLDDFGTGYSSLSYLKRLPINRLKIDKSFINDITTTYNDAIIARSIIALAHSL 767 Query: 611 NLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 +QVIAEGVESA + AFL +NG +E QG+L ++P P E + + Sbjct: 768 EIQVIAEGVESADQYAFLLENGCDEVQGYLLSRPRPFEEMEALLRDGGR 816 Score = 65.7 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 2/143 (1%) Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 A + R+L + + + I D +G N D L Sbjct: 119 ERAEEKIMHKRMERELENSNRLFRVFMQNLPAIAFIKDQQGQYIFANASTVDALQLPHEQ 178 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 +IG+ LF + A R + G A + P +L+ F Sbjct: 179 IIGKHDTLLFPP-QLAQEMRAAEQQTLAQGEAIQHVRQFPLADDVKLW-LLTTFPVQDMD 236 Query: 211 KNEIFLICSGTDITEERRAQERL 233 N + G DITE+R+A+E L Sbjct: 237 GNFNHIGGIGIDITEQRKAEEAL 259 >UniRef50_Q47AR1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47AR1_DECAR Length = 655 Score = 811 bits (2097), Expect = 0.0, Method: Composition-based stats. Identities = 202/562 (35%), Positives = 309/562 (54%), Gaps = 6/562 (1%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 A+ A R + GL+ +V A A+++ DS I N E TG DV G Sbjct: 81 QAYRQLLATKRQVEAGLALQRLIVDHASEAMMLTDSAQRILSVNSAFEQITGYAGKDVFG 140 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 ++ L + + AS RN F ++E E+W G G Sbjct: 141 KTPTML-SAGHQGLASHRNVWDFVAENGSWEGEIWDRRKDGTIYPKQMRITAICEDGVQL 199 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVY 271 + +DI+E R ERL LA D +T LPNR A+ +D + A N++ ++ Sbjct: 200 SHFVAVFSDISESRAQAERLEYLARHDPLTNLPNRLALDAHLDTLLEGATPGINRLALLI 259 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN-TSQSAL 330 +DLDNFK +ND+ GH GD+LL +++ + + ++ + L R GGDEF+V+ ++ A+ Sbjct: 260 IDLDNFKTINDSLGHHAGDRLLSELARRLGAQMDLTKRLFRLGGDEFVVVVDQLINEEAV 319 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 + ++ + P I ++ + S+GI+L PE G D+ A+IR+ADTAMY AK GR Sbjct: 320 IELVQQLAGGIGDPCNIDGHVLHCTSSIGISLYPEDGRDAQALIRNADTAMYYAKANGRN 379 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPE 449 FT MN + L L++ L AL +QLV++YQP+I G+V +EALVRW+ P Sbjct: 380 NHKFFTEPMNAAANKRLHLESELWCALAENQLVLYYQPQIDLLSGKVVGVEALVRWRHPL 439 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RVAVNISARQLADQT 508 RGLIPP +FI AEE GLI+PLG WV+L RQ +W D GI++ +AVNISA Q Sbjct: 440 RGLIPPAEFIPVAEECGLILPLGHWVLLTACRQAREWLDAGIDMGEMAVNISAHQFRQPE 499 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 ++++ +L E +++E+TES ++ + A+ + Q +G ++ +DDFGTGYSS Sbjct: 500 FISSVQAILAETGLPTGRLELEITESTIMHEVDAAIQTLAQLRAMGIKLAIDDFGTGYSS 559 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 L+ L RFP+D +K+D+ F+ D+ P + SLV +IV + ++L LQ++AEGVE+ + FL Sbjct: 560 LAYLRRFPLDRLKIDRSFLADVETDPDAASLVTSIVLLGRSLGLQLVAEGVENFAQAEFL 619 Query: 629 TKNGINERQGFLFAKPMPAVAF 650 QGF F +P+ A Sbjct: 620 RTLECERVQGFHFYQPVCAEEV 641 >UniRef50_B3PHI4 Sensory box/GGDEF family protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PHI4_CELJU Length = 595 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 191/558 (34%), Positives = 303/558 (54%), Gaps = 9/558 (1%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL-KEHDVIGQSVFKLFMSRREAAASR 170 + + I D+RG N+ G DV+G++ F A Sbjct: 27 LLAALADNSPDLIYAKDTRGRFIFLNKTLMAVMGAQDLQDVLGKTDFDFNTP-DNAQNYY 85 Query: 171 RNNRVFFRSGNAY--EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 ++++ +SG E + G+ +L +KF I L+ G DITE ++ Sbjct: 86 QDDQTVIQSGQPLINREEPVVDRQSGRIRWLLTSKFPVFNDTGKTIGLVGIGRDITERKQ 145 Query: 229 AQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGH 286 ++E+++ LA DS+T LPNR L+ AI A ++ + V+++DLD FK +ND GH Sbjct: 146 SEEQIQYLATHDSLTALPNRFMFSKLLAVAIESARRHQRQLAVLFIDLDRFKNINDTLGH 205 Query: 287 LFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPF 345 GDQLL ++ +CL ++ R GGDEF++L S +A +IL+ P Sbjct: 206 DAGDQLLITMANRFRTCLRTSDIVGRLGGDEFVILLPELESHDQAARVAQKILSAAIQPL 265 Query: 346 RIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFE 405 + E + S+GI L PE D A++++AD AMY AKE G+ + ++P++ R E Sbjct: 266 DVHGQECRVTASIGICLYPEDAEDEQALMKNADIAMYRAKEEGKNNYQFYSPDLKVRSLE 325 Query: 406 YLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEE 464 L L+ NLRKALE + +HYQ K G++ +EALVRWQ PE G I P FI AEE Sbjct: 326 RLMLENNLRKALERHEFFLHYQAKRNLKTGKIAGVEALVRWQHPELGTISPAHFIPLAEE 385 Query: 465 SGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFE 523 +GLIV LGRWV+ Q W+ +G+ + +AVN+SARQ D + + L+E Sbjct: 386 TGLIVHLGRWVLRAACTQGVIWQQQGLPPICIAVNLSARQFFDDNLINDIANALRESGLA 445 Query: 524 YCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLD 583 +++E+TE ++++ E A+ ++ LG ++ +DDFG GYSSL+ + RFPID +K+D Sbjct: 446 PELLEMEITEGMIMQDAERAIRILTGIKALGVRLAIDDFGVGYSSLAHIKRFPIDTLKVD 505 Query: 584 QVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAK 643 F+RDI +++ AI+A+ + L+L VIAEGVE+ +++ FL + ++ QG+ F+K Sbjct: 506 SSFIRDIPANREDRAITEAIIAMGKTLSLTVIAEGVETQEQENFLRDSACDQTQGYYFSK 565 Query: 644 PMPAVAFERWYKRYLKRA 661 P+ F R+ ++ A Sbjct: 566 PVSPEEFTRFMLAHMVEA 583 >UniRef50_Q47ED8 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47ED8_DECAR Length = 827 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 203/661 (30%), Positives = 328/661 (49%), Gaps = 19/661 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDV-LRFSTTETTEPDRTLQLSAEQAARI--REMTVITS 62 + Y+ + N L + + + + + E + R + S Sbjct: 163 YTNAAYHKISGLNLEQTLGTNWSMAIHPDDRQRVLLEWRAAALGEATFQTEARFLRADGS 222 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 + L +HL R + L A+ ++ Sbjct: 223 IVWARLNAAAMLDGLHL-------RGHVQTVEDISERKITEDALFEEKERAQVTLNSIGD 275 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV----FKLFMSRREAAASRRNNRVFFR 178 A++ + +G++ N + E TG IGQ + L + RE A + + Sbjct: 276 AVLTTNLKGDVTYLNLVAEMMTGWPREAAIGQPLSEVFRILNGTTREVAPNPAQLAIREN 335 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 + + G + + + D++E R ++ LA Sbjct: 336 RTVGLAADSILIHRDGLEAAIEDSAAPIHNRDGQVAGAVIVFHDVSESRAMALKMAHLAQ 395 Query: 239 TDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDV 296 D +TGLPNR + + + AI A + +VG+++LDLD FK +ND+ GH GDQLL+ V Sbjct: 396 HDFLTGLPNRALLTERLSRAIGQARRHNKRVGMLFLDLDYFKHINDSLGHAVGDQLLQQV 455 Query: 297 SLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEVYTS 355 + ++ C+ + R GGDEF++L + Q+ +A ++L P I E++ S Sbjct: 456 AERLIVCIRDTDTVCRQGGDEFVILLAEIEQARDAAPIAEKLLAAFAEPCLIAGNELHVS 515 Query: 356 CSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRK 415 S+GI++ P+ G D+ ++++ADTAMY AK GR + FT EMN R L+++ NLR+ Sbjct: 516 LSIGISIYPDDGMDADTVMKNADTAMYHAKANGRNNYQFFTTEMNTRAVRRLFIEGNLRR 575 Query: 416 ALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRW 474 AL + +++YQPKI G + EAL+RWQ PE GL+ P F+ AEESGLIVP+G W Sbjct: 576 ALRQGEFMLYYQPKIDLASGMMIGSEALIRWQDPEHGLVYPKQFVPIAEESGLIVPIGSW 635 Query: 475 VILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTE 533 V+ + RQV W++ G+ + V+VNISA + + + +L+E +++ELTE Sbjct: 636 VLREACRQVRAWQESGLVAVPVSVNISAVEFRHKDFLEGVALILKETGMLPSYLELELTE 695 Query: 534 SCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQ 593 S L+ + E + +V++ +G Q+ +DDFGTGYSSLS L RFPI+ +K+DQ FV DI Sbjct: 696 SILMHDAESSATVLEALKTMGMQLAIDDFGTGYSSLSYLKRFPINTLKIDQSFVHDIAID 755 Query: 594 PVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 P S+V A++ + + L +V+AEGVE+ ++ AFL +E QGFLF +P+PA F R Sbjct: 756 PDDASIVGAMIGMGKNLKQRVVAEGVETEEQLAFLRTLHCDEGQGFLFGRPLPADEFARL 815 Query: 654 Y 654 Sbjct: 816 L 816 Score = 83.0 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 57/208 (27%), Gaps = 2/208 (0%) Query: 26 SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKIN 85 +L S + Q+S A + + ++ ++ +LV ++ Sbjct: 54 DIVLLDLSLPDGQGIAVFEQVSRLAANALILILSSADDEEVARLAVQNGADDYLVKGLVD 113 Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 + + L+ + + + I + D G N +G Sbjct: 114 AHWLPRTLRYLIERKTTRQALTLSEARFRAMSDASPLGIFVSDIHGECVYTNAAYHKISG 173 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 L +G + R ++ E G ++ N Sbjct: 174 LNLEQTLGTNWSMAIHPDDRQRVLLE-WRAAALGEATFQTEARFLRADGSIVWARLNAAA 232 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERL 233 G + + + DI+E + ++ L Sbjct: 233 MLD-GLHLRGHVQTVEDISERKITEDAL 259 >UniRef50_C1DD31 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DD31_LARHH Length = 910 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 192/663 (28%), Positives = 323/663 (48%), Gaps = 15/663 (2%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSS 63 V+E + + + + + + + L E + S Sbjct: 246 VQEWNRAAERMFGFSREEAIGQHAFFI-------LPSEVRATLDREVLQSLMRQEGGWHS 298 Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 + ++ T D + + + ++ + L A QV ++ Sbjct: 299 VNVNQTRDGALIQCEWFNTTLVDSNGKSLGVTSLVLDITEKQAREDELRVAAQVYEQSRE 358 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 I+I D++ I N C + TG + +V+G + +F + + Sbjct: 359 GILITDAQHRIVMLNSRCCELTGYTQGEVVGTTPEWMFSESQVSTPGFVELCRHLDEQGG 418 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 + EL + GQ + + +C D+++ + A+ R++ LA D++ Sbjct: 419 WAGELLLRQRNGQLFLAWLTLRTVR--LGTSTYHVCMFGDLSDRQAAERRIQYLAYFDTL 476 Query: 243 TGLPNRNAMQDLIDHAINHADNNKVGVVYL---DLDNFKKVNDAYGHLFGDQLLRDVSLA 299 TGLPNR + D + A+ + + + L D+D+FK +ND GH GDQLL+ V+ Sbjct: 477 TGLPNRALLTDRANMALRGVEGDAAPALALLLLDIDHFKHINDTLGHSTGDQLLQSVAKR 536 Query: 300 ILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 + + + ++R GGDEF+VL + + S ++A IL RL RIG ++ S S+G Sbjct: 537 LQATVREGDTVSRQGGDEFVVLLPDANASRAASVAQEILRRLGFVCRIGEHDISVSVSIG 596 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 IA++P+ G+D + + A+ AMY AK+ GR F PEM +R ++ L LR A+E Sbjct: 597 IAMAPDDGTDFATLSKCAEIAMYRAKQEGRNTLRFFFPEMQERTLRHVQLTGALRGAVER 656 Query: 420 DQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 ++ +HYQP++ GE+ +EAL+RW P G + P +FI AEESGLI+P+G WV+ Sbjct: 657 GEMQLHYQPQVDLQTGELSGVEALLRWTHPLFGAVSPGEFIPLAEESGLIIPIGDWVLRT 716 Query: 479 VVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 RQ+A W G+ + +AVN+S Q + + +L E +VELTES + Sbjct: 717 AARQLADWLRDGLPPMVMAVNLSVLQFNLPGLAQQIASILSEAGVPPALFEVELTESMAM 776 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 E A++ I + +G QV LDDFGTGYSSL+ L RF +D +K+D FVRD P + Sbjct: 777 TEPEAAIATIDELHSVGVQVSLDDFGTGYSSLAYLKRFRLDRLKIDGSFVRDADSDPEDR 836 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 ++V AIV +A++L L +AEGVE++ + + G + QG+ ++P+PA W + + Sbjct: 837 AIVDAIVGMAESLGLATVAEGVETSGQLEVIRALGGDAVQGYWISRPLPAAGLVAWLEGW 896 Query: 658 LKR 660 +R Sbjct: 897 QQR 899 Score = 81.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 32/228 (14%), Positives = 61/228 (26%), Gaps = 7/228 (3%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 ++ + + T P + + A + Sbjct: 127 CNRHFDTMMGLSEEAVHG-------LDLTAMPVPGFSRAVRQALAGDVGHFFGEIPVAGG 179 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 + + + L D P +L G + + ++ A + Sbjct: 180 TRQLGVRAVFAPLRTPSGQVPRGVAILEDALDNPRWQDELLAGRRRRQLFLDQSVLAAIE 239 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 D +Q +NR E G + IGQ F + S A R + R + Sbjct: 240 WDDGFCVQEWNRAAERMFGFSREEAIGQHAFFILPSEVRATLDREVLQSLMRQEGGWHSV 299 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 T G + S + + DITE++ ++ LR Sbjct: 300 NVNQTRDGALIQCEWFNTTLVDSNGKSLGVTSLVLDITEKQAREDELR 347 Score = 44.1 bits (104), Expect = 0.017, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 28/114 (24%), Gaps = 11/114 (9%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 +++ D G + NR + GL E V G + + + SR Sbjct: 103 RFRYCFEHLPFGLLVFDQTGRVMVCNRHFDTMMGLSEEAVHGLDLTAMPVPG----FSRA 158 Query: 172 NNRVFFRSGNAYEVELWI---PTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 + + E+ + G + + D Sbjct: 159 VRQALAGDVGHFFGEIPVAGGTRQLG----VRAVFAPLRTPSGQVPRGVAILED 208 >UniRef50_Q602I2 Sensory box protein/response regulator n=1 Tax=Methylococcus capsulatus RepID=Q602I2_METCA Length = 710 Score = 809 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 190/592 (32%), Positives = 294/592 (49%), Gaps = 11/592 (1%) Query: 79 LVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNR 138 + R N A + L A V S + ++++++ I N Sbjct: 118 VKARLRNHARLVMQERRLQREIAEHKAAREQLQVAGMVFSASSEGMLLVNADNRIVAVNP 177 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF 198 TG DV+G+ KL S R A + + + E+W G+ Sbjct: 178 AFVALTGYGPEDVVGKDP-KLLQSGRHGPAFYQAMWAALEATGTWRGEIWNRRRNGEEYA 236 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 + +DITE++ ++ + + D++T LPNR + + + A Sbjct: 237 EHLTINTIYDEAGKVHLRVALFSDITEKKASEALIEFQSCYDALTRLPNRRLLAERLALA 296 Query: 259 INHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVL--ARPG 314 A ++ V ++Y+DLD+FK+VND GH GD LL V+ + C+ + + AR G Sbjct: 297 SERAHRDRGRVALLYIDLDHFKEVNDTLGHHQGDALLVQVAHRVRRCVRESETVTVARLG 356 Query: 315 GDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAI 373 GDEF V+ + +E +A I+ L PFR+G + S S+GI + P+ +D+ + Sbjct: 357 GDEFTVIVPDFEGMDEVERLARAIIDSLSEPFRLGDQLAHVSASIGITVFPDDAADTDGL 416 Query: 374 IRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW- 432 +R+AD AMY AK GR + F PEM + + + L LR A++ QL +HYQP + Sbjct: 417 LRNADQAMYAAKRAGRNGYQAFNPEMQRAMSMRVRLSQALRDAVQAGQLRLHYQPIVELA 476 Query: 433 RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GI 491 G VR EAL+RW+ PE G + P FI AE+ G I +G WV Q A+WR + G Sbjct: 477 SGRVRKAEALLRWEHPEFGEVSPAAFIPIAEDCGSIHCIGDWVFERAACQAARWRSRFGT 536 Query: 492 NLRVAVNISARQLADQ--TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 + +V++N+S RQ + L EL + + +E+TE+ L++ D+ + Q Sbjct: 537 DFQVSINVSPRQFQAGGRDF-GRWLERLGELGLDGSMLALEITETLLMDTDQAIADKLAQ 595 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 F G Q+ LDDFGTGYSSL+ L F ID +K+D+ FVRD+ S L AIV +A Sbjct: 596 FRAAGVQIALDDFGTGYSSLAYLKEFRIDYLKIDRTFVRDMTPDSKSFLLSEAIVTMAHR 655 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 L L+VIAEGVE+ ++ A L + G + QG+LF++P+P AFE + A Sbjct: 656 LGLKVIAEGVETPQQYALLERIGCDYFQGYLFSRPLPEDAFEGLLRSASCEA 707 >UniRef50_A4Y0Z3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Pseudomonas RepID=A4Y0Z3_PSEMY Length = 960 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 210/654 (32%), Positives = 329/654 (50%), Gaps = 15/654 (2%) Query: 13 FLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDE 72 L P V+ T PD +L ++ + VD Sbjct: 309 ELFGLEPEQV-----QVMLRDLTPRLHPDDLPRLRRALVEHMKGRSEDYQIEYRVRHVDG 363 Query: 73 SDLSVHLVGRKINKREWAGNASAW---HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS 129 + V GR + +R+ AG + R A V A I ILD Sbjct: 364 HWVWVEDRGRAV-ERDAAGRVRRMLGTRRDVSARRQQEQEQRLAATVFEAASEGIFILDP 422 Query: 130 RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWI 189 + NR TG +V+G++V L SR + R +++ EL Sbjct: 423 DYRVLAVNRAFSAVTGYSREEVVGRTVTSLIGSREMRRQ-YQMIRQELDGSGSWQGELIE 481 Query: 190 PTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRN 249 G+ + + + ++ D+T R A+ERLR L++ D +TGL NR+ Sbjct: 482 TRKSGELYPQWLQLNLVRDASGRPSHIVGFFADLTARREAEERLRYLSHYDELTGLANRS 541 Query: 250 AMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHD 307 ++ + A A + +V++DLD FK +ND+ GH DQLLR +S + + Sbjct: 542 LFKERLHEASQRARQSGRSIALVHIDLDRFKLLNDSLGHEVADQLLRQMSRRLTQAVPEA 601 Query: 308 QVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEH 366 +AR GDEF +L S+L +ASR+L +LRLP +G E+ S S+GI+L P++ Sbjct: 602 DCIARLSGDEFAILLDAYGSLSSLARVASRLLAKLRLPMDVGGHELVVSASLGISLLPDY 661 Query: 367 GSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHY 426 + A+I A+ A+ AK G F FT + E L L+ LRKA+E QL + Y Sbjct: 662 AREIGALISQANMAVQHAKHLGGNTFQFFTDNLQACTLERLQLENQLRKAIEEGQLEVFY 721 Query: 427 QPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAK 485 QPK+ ++ + EALVRW+ P++GL+ P +FI AEE+GLI P+G +V+ RQ + Sbjct: 722 QPKLNLADDQLNAAEALVRWRHPQQGLVAPGEFIGLAEETGLIAPIGEFVLRQACRQARQ 781 Query: 486 WRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELAL 544 W+ +G+ +RV+VNIS QL + + ++QVL+E +++ELTES L++N + + Sbjct: 782 WQQQGLAEIRVSVNISVYQLRQGNLTSLVRQVLEETGLAPQYLELELTESQLLDNVDSVV 841 Query: 545 SVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIV 604 +Q +LG ++ +DDFGTGYSSLS L RFP+ +K+DQ F+RD+ ++ RAI+ Sbjct: 842 VTFRQLRELGVKLAIDDFGTGYSSLSYLKRFPVHYVKIDQTFIRDLSPGGEDAAITRAII 901 Query: 605 AVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 A+A +L L+V+AEGVE+ + FL +E QG+L ++P+ A AF + Sbjct: 902 AMAHSLELKVVAEGVETQAQMDFLKSQNCDEIQGYLISRPVEAAAFAELLRAQR 955 >UniRef50_Q47Z22 Sensory box/GGDEF/GAF/EAL domain protein n=5 Tax=Gammaproteobacteria RepID=Q47Z22_COLP3 Length = 1206 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 182/660 (27%), Positives = 305/660 (46%), Gaps = 17/660 (2%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMS 67 + + + ++ + + + + + S Sbjct: 546 NERWATMLGYTHKELKHSTNQ-----WADFVHQEDREKAWQSINDVLEGRSKSHSLEYRM 600 Query: 68 LTVDESDLSVHLVGR--KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 LT + VH + + S H + + A V S A I+ Sbjct: 601 LTKEGGYRWVHDQANVMQRHSNGKPLRMSGTHSDITNRKLAEEKIKLAASVFSHAGEGII 660 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I D + I N + TG + IG++ L R+ + ++ + Sbjct: 661 ITDDKATIIDINDAFTNITGFSREEAIGKNPRILQSGRQTPE-FYADMWQALQNEGYWSG 719 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+W G+ + + + G DIT + Q +L +A+ D +T L Sbjct: 720 EVWNRRKNGEVYAVMQTISAVRDVHGIATHYVSLGNDITLMKEHQNQLEHIAHFDILTNL 779 Query: 246 PNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR + D + A+ +K + VV+LDLD FK VND +GH GD+LL +S+ + Sbjct: 780 PNRVLLADRLSQAMLQCSRHKQSLAVVFLDLDGFKHVNDTHGHDIGDELLIALSVRMKEA 839 Query: 304 LEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 L + LAR GGDEF+ + ++ + E + R+L P I + S S+G+ L Sbjct: 840 LRENDSLARIGGDEFVAVLADLTTVEDCEPVLERLLLAASEPVIFDNIVLNISASIGVTL 899 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV-FEYLWLDTNLRKALENDQ 421 P+ + ++RHAD AMY AKE G+ ++ +F + V + L+ +R AL+N Q Sbjct: 900 YPQDNVGADLLMRHADQAMYVAKESGKNRYHLFDTAQDDAVKVQRESLE-AIRSALDNHQ 958 Query: 422 LVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 V+HYQPK+ R G V +EAL+RWQ P+RGL+ P++F+ E + + + +G WVI + Sbjct: 959 FVLHYQPKVNMRKGIVTGVEALIRWQHPKRGLLNPIEFLPVIENNPMSIEMGEWVIDTAL 1018 Query: 481 RQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQEL-NFEYCPIDVELTESCLI 537 Q+++W+ G+ + ++VNI+A QL L +L + E +++E+ E+ + Sbjct: 1019 TQISQWQKLGLNFPVSISVNIAALQLQQPDFTDRLMILLAAHPDVEPHYLELEVLETSAL 1078 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 E+ +++ LG LDDFGTGYSSL+ L R P + IK+DQ FVRD+ Sbjct: 1079 EDVYNVSTIMNACMALGVNFALDDFGTGYSSLTYLRRLPANLIKIDQSFVRDMLHDSDDL 1138 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 ++V ++A+A++ VIAEGVE+ + L + G QG+ A+PMPA W + Sbjct: 1139 AIVEGVIALAKSFKRDVIAEGVETIEHGTALLQLGCELAQGYGIARPMPASEIPTWISDW 1198 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 3/100 (3%) Query: 136 FNRLCEDYTGLKEHDVIGQ-SVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 N GL D+ S + + + ++ + SG Y VE + G Sbjct: 249 VNDEWLSILGLSRQDITNHISDWDGLIHPNDDQFMKKTVQTHILSGKNYVVEFRMKHADG 308 Query: 195 QRLFLFRNKFVH-SGSG-KNEIFLICSGTDITEERRAQER 232 + +++ + V + L + DIT + A+ R Sbjct: 309 RWVWIQGSGSVIEYDENTHEPVRLCGTHQDITVRKLAELR 348 >UniRef50_Q607V4 Sensory box protein/GGDEF domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607V4_METCA Length = 819 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 173/652 (26%), Positives = 296/652 (45%), Gaps = 17/652 (2%) Query: 12 NFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVD 71 + + + + L + +R + A + I ++ L Sbjct: 177 QMIEAESIEEVRGKPITSLVAPQ----DVERFKAFNQRVLA---GESGILEFQIIGLKGG 229 Query: 72 ESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG 131 L H V A + + A + AI+I D+ G Sbjct: 230 RRWLESHAVPFASRP-GAPDAVLAVTRDVTERKLAEEAVRLAATAFETS-EAIMITDAAG 287 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 +QR N TG +++G L E S R + + ++ EL Sbjct: 288 IVQRVNSGYSAITGYTSDEIVGTPSEFLHPGGEEGKTSPRAILEALKGTDCWKGELTARR 347 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G ++ + + + + DI+E +RAQ+ + LA D +TGLPNR Sbjct: 348 KNGDVCPVWLSIKAVRNDEQILTHYVVTFVDISERKRAQQEIEQLAYFDPLTGLPNRRLF 407 Query: 252 QDLIDHAINHA--DNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 + ++ AI + + ++ ++++DLD FK +NDA GH GDQLLR V+ + + + Sbjct: 408 LERLNQAIGESCVNGSRCSLLFVDLDRFKHLNDARGHTVGDQLLRKVAERLSEGVGRGGM 467 Query: 310 LARPGGDEFLVLASNTSQS------ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 +AR GGDEF++L + + +A + L+ PF + + Y + S+G A+ Sbjct: 468 VARLGGDEFVILLNGLDEEFESACRRTMDVAENLRVILQRPFVLSSGQHYVTASIGTAIY 527 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P + +++ AD AMY AK GR + M L L+ ++ ALE + Sbjct: 528 PFDTDSADDLLKAADMAMYEAKASGRNTVRAYASTMQAAAETRLTLERDMHAALERREFR 587 Query: 424 IHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQV 483 ++ Q ++ G + EAL+RW+ P G++ P FI+ AEE+GLI+P+G WV V + Sbjct: 588 LYLQSQVDGNGRIVGAEALLRWEHPTEGILLPDKFIALAEETGLILPIGEWVFEQVCHEN 647 Query: 484 AKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 + G L ++VNIS R+ ++++L+ + E+TE L+ + + A Sbjct: 648 VRLSQAGHRLSLSVNISPRRFQQADFLDHVQRILKRTGANPHDLIFEITEGLLVSDFDDA 707 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 ++ + +LG + +DDFGTGYSSL+ L R P+ +K+ Q FV D+ P +LV+ I Sbjct: 708 IAKMSFLERLGIRFSVDDFGTGYSSLAYLKRLPLSELKIAQTFVNDLPDDPSDVALVQTI 767 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +++A LNL+ +AEGVE+ + FL G QG+ F+ P+PA F Sbjct: 768 LSMAYHLNLETVAEGVETRAQLEFLKARGCTRFQGYYFSPPLPATEFFEKLA 819 Score = 69.5 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 48/163 (29%), Gaps = 6/163 (3%) Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF 136 + + R+ + + L + + + + G + Sbjct: 115 IPRALEIPSPRQLLELNQHLASEVSERKQAEQRLRML---IDAEPECVKTVGADGTLLDM 171 Query: 137 NRLCEDYTGL-KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQ 195 NR +V G+ + L + N RV E ++ G Sbjct: 172 NRAGLQMIEAESIEEVRGKPITSLVAPQDVERFKAFNQRVLAGESGILEFQIIGLK--GG 229 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILAN 238 R +L + + ++ D+TE + A+E +R+ A Sbjct: 230 RRWLESHAVPFASRPGAPDAVLAVTRDVTERKLAEEAVRLAAT 272 >UniRef50_Q1K234 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K234_DESAC Length = 766 Score = 808 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 181/569 (31%), Positives = 292/569 (51%), Gaps = 9/569 (1%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A A R L + +A AI ++ G N G ++ Sbjct: 194 AMALVQDITEKRKTDEVLRRFRFSIEQASEAIFWINDEGRFLFVNDQACHSLGYSASELE 253 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 ++ + A +S E G+ + + + + Sbjct: 254 SLHLWDI--DPDFPAERWAEQWERMKSDPKQVFETRHQRKDGRIFPVEVSASQCLFNNEE 311 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVV 270 + DIT ++ ++ L +N D++TGL NR + D I AI HA+ V Sbjct: 312 --NHVAFVRDITIRKKYEKELEHQSNHDALTGLANRVLLDDRIQQAIVHAERAQRNTAVF 369 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL 330 LDLD FK +ND+ GH GD +L V+ + +C+ L+R GGDEF ++ ++ + A Sbjct: 370 LLDLDRFKVINDSLGHSQGDAVLLAVAERLSACISPGDTLSRLGGDEFAIVMTHVNHPAD 429 Query: 331 EAM-ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 + A +IL PF +G E+ + S+G +L P G S ++RHAD AMY AK+ G Sbjct: 430 ARIMAQKILNAFEQPFPLGNRELRITTSIGASLYPRDGEQSEDLLRHADAAMYQAKKQGG 489 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSP 448 F + EM+ R + L L+ +LR+AL+ V+HYQPK+ G++ EALVRW P Sbjct: 490 NGFQFCSEEMDTRAHKALELEGDLRQALQLGSFVLHYQPKVKIASGKIDGCEALVRWNHP 549 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQ 507 ++G+I P DFI AEE+GLI+ LG WV+ + RQ W+ +G+ +++AVN+SARQ Sbjct: 550 DKGMISPDDFIPLAEETGLIIALGEWVLREACRQFKAWQAQGLPPIKIAVNLSARQFLQS 609 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 +++ +L E + + +D+ELTES ++E+ + ++ + Q+G + LDDFGTGYS Sbjct: 610 DFVESIQTILHEFDIDPHWLDLELTESMVMEDPDRIAKLLAELKQIGFALSLDDFGTGYS 669 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SL+ L RFPID +K+D+ F+ D+ + S+ +++ +A +L + IAEGVE+ ++ AF Sbjct: 670 SLNYLRRFPIDCLKIDRSFILDVASDATAASVANSVIGIAHSLGIHAIAEGVETREQYAF 729 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYKR 656 L + QG+LF+KP+PA Sbjct: 730 LAMCECDSIQGYLFSKPLPANDLAALLAN 758 Score = 63.8 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 55/210 (26%), Gaps = 56/210 (26%) Query: 102 VARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFN------------RLCEDYTGLKEH 149 + +G + +VV + I ++D GN+ N + D G Sbjct: 73 AIKRALYGEALFRKVVETIPTGIWVVDREGNVVDCNFAAHGLLQEFGIQAYNDIQGY--A 130 Query: 150 DVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTC------KGQRLFLFRNK 203 ++ G + S + E + G R + Sbjct: 131 EIQG------WWSDNGQPVHPDEWGISRSLS---RGETCLREKIDIACTDGVRRTVLYTS 181 Query: 204 FVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHAD 263 + DITE+R+ E LR +I A Sbjct: 182 LPLKSENGAITGAMALVQDITEKRKTDEVLR-------------------RFRFSIEQAS 222 Query: 264 NNKVGVVYL-DLDNFKKVND----AYGHLF 288 + ++ D F VND + G+ Sbjct: 223 E---AIFWINDEGRFLFVNDQACHSLGYSA 249 >UniRef50_Q1JX80 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX80_DESAC Length = 678 Score = 808 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 190/655 (29%), Positives = 318/655 (48%), Gaps = 10/655 (1%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + ++ + + L + + +Q R + Sbjct: 25 YANRMWQETLGYGKNDLTQLNFFDLLHADF-HCDCQDRIQRLMSGETVPRFEVEYKTRYG 83 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + + S G + + + +A + L + + + I Sbjct: 84 HKIIAEGSISLYKENGEPCGIQGFFRDITA---RKKTEKALQTSEERFRTIYESSVAGIA 140 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 +L G+ + N ++ G E +++ + + R N ++ Sbjct: 141 MLAPDGHFLQANSAFCNFLGYNEEELLQMKITDVTHPDDIEDTLSRRNIARANRLHSIVC 200 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E G + + + N ++ + DIT + A+ER+R LA DS+TGL Sbjct: 201 EKRYIRKDGSVFWAQLSSTWFFDANGNPLYTVPVIQDITRRKEAEERIRELAYYDSLTGL 260 Query: 246 PNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 NR D +D + + + +++LDLD FK VND GH GD +LR + + C Sbjct: 261 ANRTLFNDRLDQVMARSRRRQSRFALMFLDLDRFKGVNDTLGHAVGDAMLRQAAERLNEC 320 Query: 304 LEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 L + +AR GGDEF+++ S+ + A L +A +IL L PF +G+ EVY+S SVGIA+ Sbjct: 321 LRENDTVARLGGDEFVIILSDYKEDANLPRVADKILKALSSPFDLGVREVYSSTSVGIAI 380 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 P+ G ++T ++RHAD AMY AKE G F ++ EMN R + ++ NLR+ALE ++ Sbjct: 381 YPDDGDEATDLLRHADMAMYAAKESGGDTFRFYSSEMNARAVSRMDMEANLRRALEQEEF 440 Query: 423 VIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 I YQP+I +V +EAL+RWQ P+ G+IPP FI AEE+ LI+PLG WV+ V Sbjct: 441 FIEYQPQIDLITNKVAGVEALLRWQHPQLGVIPPTQFIGLAEETNLILPLGEWVMRRVFE 500 Query: 482 QVAKWRDKG-INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 Q W+ +G + RV +N+S RQ + ++L E ++ E+TES ++++ Sbjct: 501 QCVMWKQEGYLPFRVGINVSGRQFVQPDFVDMVCRLLDETGAAPELLEFEITESVVMKDV 560 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 + A+ ++ +LG + +DDFGTGYSSLS L P++ +K+D+ F+ D+ +++V Sbjct: 561 DAAVLTLEALKKLGINMAIDDFGTGYSSLSCLKHLPLNRLKIDKSFISDLQDNADDRAIV 620 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE-RWY 654 A +A+A+ L L V AEGVE+ + F+ K +E QGF F++P+ W Sbjct: 621 EATIAMAKRLELGVTAEGVETEGQYGFVQKRECDEVQGFYFSRPLSPSEVADAWL 675 Score = 76.1 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 42/123 (34%), Gaps = 2/123 (1%) Query: 112 FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRR 171 ++ ++ I ++ G I NR+ ++ G ++D+ + F L + R Sbjct: 2 QYADLLENSNDLIQVVGFDGRIIYANRMWQETLGYGKNDLTQLNFFDLLHADFHCDCQDR 61 Query: 172 NNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 + E+ T G ++ + + DIT ++ ++ Sbjct: 62 -IQRLMSGETVPRFEVEYKTRYGHKIIAEGSIS-LYKENGEPCGIQGFFRDITARKKTEK 119 Query: 232 RLR 234 L+ Sbjct: 120 ALQ 122 >UniRef50_B1XZW3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=7 Tax=cellular organisms RepID=B1XZW3_LEPCP Length = 1069 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 189/567 (33%), Positives = 300/567 (52%), Gaps = 7/567 (1%) Query: 100 PAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 + L L +V + I I+D++ I N TG +++G +L Sbjct: 489 INHLKQLEQRLELWAKVFETSSEGIFIVDAQQRILTANWALTRSTGHDLIELMGGDPAEL 548 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 + ++ +++ E+ I G + + +C+ Sbjct: 549 LAGADARQTWQSLVERV-QTRGSWQGEVRICRRAGGDYPAWLLANAVRDRAGHVSHWVCT 607 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNF 277 DIT+ + ++ R+R LA D +T LPNR + + A+ A KV V+++DLD F Sbjct: 608 SIDITDRKESERRIRFLAEHDVLTELPNRALCIERLRLALQQARRTGQKVAVLFIDLDRF 667 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMA-S 335 K +ND+ GH GD LLR V+ ++ + ++R GGDEF+V+ + + + + Sbjct: 668 KNINDSLGHHVGDGLLRSVAQRLVDGVRAGDTVSRLGGDEFVVVLNGLADIEEVAHVVEQ 727 Query: 336 RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVF 395 R++ R+R P + E++ SCSVGI++ P+ D ++R AD AMY AK GR F Sbjct: 728 RLIPRVRQPHGVQGAEIHVSCSVGISVFPDDAQDIDELMRQADVAMYQAKAQGRNGAQFF 787 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIP 454 T EMNQR L ++ +LR A+ QL +HYQP+I G V +E L+RW SPE G +P Sbjct: 788 TAEMNQRAQARLMVENHLRSAVAQGQLSLHYQPRIHVADGRVAGVEGLLRWHSPELGHVP 847 Query: 455 PLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTAL 513 P FI AEE+GLI+ +G WVI Q+ +WR +G+ + V++N+SA QL D + L Sbjct: 848 PDRFIPVAEETGLIIEIGAWVIEAACAQIERWRGQGLQEVAVSINLSALQLRDPGLLDVL 907 Query: 514 KQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLA 573 + L+ +++ELTES L++ + L + +LG ++ +DDFGTGYSSL+ L Sbjct: 908 RASLERHAVPPGQLELELTESILMDQVDAHLVTLHALRELGLRLSIDDFGTGYSSLNYLT 967 Query: 574 RFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGI 633 RFPID +K+D+ FVRD+ P ++++AI+ + L L+V+AEGVE E L G Sbjct: 968 RFPIDQLKIDRSFVRDMLDDPRDLAIIKAIIGLGHTLGLKVVAEGVERELEVQALRAAGC 1027 Query: 634 NERQGFLFAKPMPAVAFERWYKRYLKR 660 +E QG+ FA+PM A W +++R Sbjct: 1028 DELQGYHFARPMAADTATAWLLDWIRR 1054 >UniRef50_C3X4J8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Oxalobacter formigenes RepID=C3X4J8_OXAFO Length = 1077 Score = 807 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 180/660 (27%), Positives = 310/660 (46%), Gaps = 14/660 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + + ++ L L E + I E + Sbjct: 424 CNRAFENFFDLEENRIIGKTDAGLPTDRQADM-------LRPEGSRIIEEGKPEVMEQWV 476 Query: 67 SLTVDESDLSVHLVGRKINKREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 + + ++ + + ++ L A V + AI+ Sbjct: 477 TNVQTGKRVFFDVIKAPVKTPDGRLIGVLGIARDITRRKEDEEKLQLAALVYKNSSEAIL 536 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 I +++ I N E TG +++G+ L S R+ A + + Sbjct: 537 ITNAKNEILAVNPAFERITGYTPAEIMGKDPKIL-SSGRQDKAFYKAMWDALGKKGFWRG 595 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 ELW G+ + V + + + D TE++ A++ + AN D +TGL Sbjct: 596 ELWNRKKNGEVYLAWLTINVVYNEDGSVRYYVELSNDFTEKKEAEDMIWRQANFDFLTGL 655 Query: 246 PNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR + D + I + + K+ +++LDLDNFK VND GH GD LL DV+ + C Sbjct: 656 PNRRMLLDRLQQEIVKVNQSGKKLALLFLDLDNFKDVNDTLGHDMGDLLLVDVAGRLNEC 715 Query: 304 LEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 + ++R GGDEF V+ + S E + +L L P+R+ Y S S+G+ + Sbjct: 716 VREIDTVSRLGGDEFAVILTELSDLRIAETVTQCMLRSLAQPYRLDGEIAYLSASIGMTV 775 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 P+ G+ + ++AD A+Y AK+ GR + FT M + L ++R A+E Q Sbjct: 776 YPDDGTGIETLQKNADQALYAAKQAGRNRMSYFTASMQAAAQNRIRLANDMRIAVEEHQF 835 Query: 423 VIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 + YQP + G++ EAL+RW P RG++ P +FIS AEE+GLI+ + W +V R Sbjct: 836 EMLYQPIVELGTGKIHKAEALIRWHHPLRGIVSPAEFISIAEETGLILTISDWAFREVAR 895 Query: 482 QVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND 540 +V +WR++ +++ NIS +T ++ L L I +E+TE L+ ++ Sbjct: 896 EVGRWRERYYPGFQISFNISPALFQSKTDYSDWFDELARLKAPGSSIVMEITEGVLLVSN 955 Query: 541 ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV 600 ++ + +F + G ++ LDDFGTGYSSLS L +F ID +K+DQ FV++I +P +L Sbjct: 956 WQVIAQLTEFHRHGMEIALDDFGTGYSSLSYLKKFEIDYLKIDQAFVKNIENEPKDMALC 1015 Query: 601 RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 A++ +A L+++VIAEGV++ ++ L G + QG+LF++P+ A FE ++ + Sbjct: 1016 EAMIVMAHKLDMKVIAEGVQNERQRWLLAGAGCDYGQGYLFSEPLAAAEFENLLEKNRQE 1075 Score = 85.7 bits (212), Expect = 5e-15, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 65/178 (36%), Gaps = 12/178 (6%) Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 M+ L + L ++L ++ + AV L V Sbjct: 358 GILFMVRLQEMRNQLLLNL------EKRVEERTEDLNKVNAVLAQSEARLK---SVFDNI 408 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 I + ++ G NR E++ L+E+ +IG++ L + R+A R G Sbjct: 409 PDLIWLKNTAGVYLTCNRAFENFFDLEENRIIGKTDAGL-PTDRQADMLRPEGSRIIEEG 467 Query: 181 NAYEVELWIPT-CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 +E W+ G+R+F K I ++ DIT + +E+L+ LA Sbjct: 468 KPEVMEQWVTNVQTGKRVFFDVIKAPVKTPDGRLIGVLGIARDITRRKEDEEKLQ-LA 524 >UniRef50_A1SU67 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=6 Tax=Alteromonadales RepID=A1SU67_PSYIN Length = 1014 Score = 807 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 193/663 (29%), Positives = 319/663 (48%), Gaps = 15/663 (2%) Query: 8 TTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMS 67 + + + + + + + ++ P+ ++ + T Sbjct: 358 NARWAEMLGYR-FEDIQNDTSI----NLDSVHPNDCGRVWQSVTDHLEGRTAQHKIEYRM 412 Query: 68 LTVDESDLSVHLVGRKIN--KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 T + + +N + + S H + + A V + A+ Sbjct: 413 RTRQGEYKWILDCAKIVNYGEDQQPLRMSGTHTDITKRKLAEESMQLASMVYQNSREAMT 472 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 + DS GNI N + TG ++ G+S +S+++ + + S + Sbjct: 473 VTDSNGNIITTNPAFTEMTGYSADEITGKS-HTFIVSKQQDKRVYQRMELALNSTGHWRG 531 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+ G+ ++ + +DITE +++++ + AN D++TGL Sbjct: 532 EVSCRHKNGENYMALLGINSIYNEDRSVHRRVAQFSDITERKKSEKIIWKQANFDNLTGL 591 Query: 246 PNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 NR D + H N A VG+++LDLD FK VND GH GDQLL DV+ + +C Sbjct: 592 SNRQMFHDQLLHEKNKAQRRGLNVGLLFLDLDRFKAVNDTLGHNMGDQLLIDVAQRLRNC 651 Query: 304 LEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIAL 362 + +++R GGDEF V+ + +E +A +IL L PF +G VY + S+GI Sbjct: 652 VRKRDLVSRFGGDEFTVIIGGLKNTQSVERVAQKILCELAEPFLLGEQNVYITPSIGITF 711 Query: 363 SPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQL 422 P+ G + ++++AD AMY+AKE GR + FT M ++V L +LR AL+ +QL Sbjct: 712 YPKDGEATEMLLKNADQAMYSAKEKGRNCYHYFTNSMQEQVERGGQLANDLRYALKKNQL 771 Query: 423 VIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVR 481 ++YQP + G++R EAL+RW PE G++ P +FI AEE+G IV +G WV Sbjct: 772 ELYYQPIVALGTGQIRKAEALIRWHHPELGMVSPAEFIPIAEETGTIVEIGDWVFRQAAD 831 Query: 482 QVAKWRDKGI-NLRVAVNISARQLADQTI-FTALKQVLQELNFEYCPIDVELTESCLIEN 539 QVA WR + + +V++N S Q + T+ + L L + +E+TE L++ Sbjct: 832 QVAHWRREYQNDFQVSINKSPVQFREGGSDITSWLEHLLALGLPGQAVVIEITEGLLLDG 891 Query: 540 DEL-ALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 + + F G +V LDDFGTGYSS+S L +F ID +K+DQ FVR++ Sbjct: 892 SSRIVIDKLLAFRDSGIEVSLDDFGTGYSSMSYLRKFHIDNLKIDQSFVRNLKVDSDDMI 951 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 L AI+ +A L +QVIAEG+E+ ++ L+ G + QG+LFAKP+P F R++ Sbjct: 952 LCEAIIIMAHKLGMQVIAEGIENEEQRRLLSAAGCDYGQGYLFAKPLPEKDFSCLLLRHI 1011 Query: 659 KRA 661 A Sbjct: 1012 HVA 1014 Score = 88.4 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 17/156 (10%), Positives = 45/156 (28%), Gaps = 1/156 (0%) Query: 79 LVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNR 138 L+ + L I I R N Sbjct: 174 LLLYPLITALLGMLFVQRLRRNQSTDALKESEFLFRSQFDLGSIGIAITYPGKGWLRVNP 233 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF 198 + G +E +++ + +L + +++ + Y ++ G+ ++ Sbjct: 234 RLCEILGYREEELLLLNWSELTHPDDRHLDLYQYDQMLTGEEDGYSLDKRFIRKDGESVY 293 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + + F+I D +E + A++++R Sbjct: 294 VHMTISCYR-VDGAVQFVIAGILDSSERKHAEDKIR 328 >UniRef50_Q0AAW8 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AAW8_ALHEH Length = 1051 Score = 807 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 186/571 (32%), Positives = 292/571 (51%), Gaps = 8/571 (1%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A + + + AE+V + AI+I D+R I R NR + TG +V+ Sbjct: 474 ALDNIEREQARKAAEEQMRLAEEVFEHSTEAIIITDARQRIMRVNRAFTERTGYVPDEVL 533 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G+ L RR R +E E+W G+ L+ V Sbjct: 534 GRRPHMLRSPHHTQQFYRRIL-ARLRRHGFWEGEIWNRRKGGENAPLWLTLSVVRDEAGR 592 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVV 270 I G D+TE + + +R LA D +TGLPNR + D + A+ A + + ++ Sbjct: 593 ITHYIAVGLDLTETKDREAHIRYLAQHDPVTGLPNRGLLADRLGQALRRAQDQHYRLALL 652 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-A 329 LDLD FK +N+ GH+ GD++L+ V+ + + ++R G D+FL+L + Sbjct: 653 SLDLDRFKIINETLGHVAGDEVLQTVAQRLQDHVNGAGTVSRIGSDQFLILLPEIHKPTE 712 Query: 330 LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKE-GG 388 A R++ + P + E+ S VGIAL PE G + + HAD AM AK+ G Sbjct: 713 AAQAAERLMACVAEPLDLSGQELTPSSVVGIALYPEDGDNLETLHSHADAAMSMAKQASG 772 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQS 447 + F+ +M R E L L++ LR+AL+ + +HYQP+++ G + +EAL+RW + Sbjct: 773 HEGYRFFSSDMTSRARERLSLESRLRRALDRGEFRLHYQPQVSLADGTLTGMEALLRWHA 832 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLAD 506 + G I P FI AEE+GLIVPLGRWV+ + RQ WR G+ L V+VN+S QL Sbjct: 833 GDEGDISPARFIPIAEETGLIVPLGRWVLGEACRQNRAWRQAGLPALPVSVNLSVVQLRR 892 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLI-ENDELALSVIQQFSQLGAQVHLDDFGTG 565 + +++ L+ + +E+TES + E+D ++ Q ++G + +DDFGTG Sbjct: 893 SDVVADVRRALETSGLPGDGLHLEVTESLFLSEDDPAVVTGFQTLREMGISLAIDDFGTG 952 Query: 566 YSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKED 625 YS+L L R PI +K+DQ FVR I ++ +AI+++A++L L VIAEGVE+A E Sbjct: 953 YSNLGYLKRLPIAKLKIDQSFVRGIGDSGHDTAINQAIISIARSLGLGVIAEGVETAAEL 1012 Query: 626 AFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 L G +E QGF +++P+ A + Sbjct: 1013 RVLQALGCDEIQGFYYSRPLDAERAGQLMAA 1043 Score = 81.1 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 49/144 (34%) Query: 93 ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVI 152 A DL+ E + + IV LD NR E +TG+ + Sbjct: 169 ARRLRTELMAQADLAARERAYETLAENSPDIIVRLDRDLRHLYVNRALEAFTGIPREHYL 228 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G++ ++ + A R+ SG + P +G+ + N Sbjct: 229 GRTHEEVGFRGKLLATWERHLNQALESGEPGTMTFSHPDREGRVRHFEALIVPETDDTGN 288 Query: 213 EIFLICSGTDITEERRAQERLRIL 236 ++C D+T +A+E + L Sbjct: 289 IAHVLCISHDVTGHVQAREEISRL 312 >UniRef50_C6XAD3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD3_METSD Length = 751 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 189/630 (30%), Positives = 307/630 (48%), Gaps = 30/630 (4%) Query: 48 AEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLS 107 E R+ SL L + E + R+ Sbjct: 128 EETVERLEHEVEERELAERSLAAFNDTLE---TLVQQRTAELEEINRLLKLEIDLRREAE 184 Query: 108 HGL----SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV------- 156 L A + ++ D + + N + E TG + G+ + Sbjct: 185 QTLYAEKQRAVVTLQSIGDGVITTDKQSRVNYLNPVAERMTGWSNAEAQGKPLLEVFRIV 244 Query: 157 ----FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 KL + + L G + + N Sbjct: 245 NESSRKLVPNPVDVVLQHGEIYGLANHTA-----LIGRH--GNEYAIEDSAAPIRDQDGN 297 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVV 270 + ++ D++E R ++ LA D +TGLPNR + D ++ A+ A ++ + ++ Sbjct: 298 VLGVVLVFHDVSEARNMANKMTYLAEHDYLTGLPNRLLLNDRLNQALTIARRDQEFIALM 357 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-A 329 +LDLD+FK +ND+ GH GDQLL+ V+ + SCL ++R GGDEF++L + + Sbjct: 358 FLDLDHFKNINDSLGHEVGDQLLKMVARRLESCLRASDTISRQGGDEFMILLPELTNYFS 417 Query: 330 LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 +A ++L +P+ IG E+ S S+GIA+ P+ G + + ++AD AMY AK GR Sbjct: 418 PAEVAEKLLAAATVPYEIGSHEITVSASIGIAVFPDDGENGELLTKNADAAMYHAKSLGR 477 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSP 448 + FT MN+RV E L++ LR+A+E ++ V++YQPKI G+V EAL+RWQ P Sbjct: 478 NNYQFFTRAMNERVMEIAELESKLRRAVERNEFVLYYQPKIDIRTGQVVGAEALIRWQHP 537 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQ 507 GL+ P FI AE+SGLI P+G WV+ + RQ +W+ G+ + VAVN+S QL Sbjct: 538 SWGLVAPDRFIPIAEDSGLIRPIGLWVMREACRQNQEWQAAGLARIPVAVNLSTVQLRQH 597 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 + ++L E +++E+TES I + ++ + + +G ++ LDDFGTGYS Sbjct: 598 NFLQEVSEILLMSGLEPDYLELEVTESVAIHAETEVINWLHKLRSMGVKLALDDFGTGYS 657 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SLS L R PI+ +K+D+ F+RDI P +++ AI+ ++ L L VIAEGVE+ + F Sbjct: 658 SLSYLKRLPINNVKIDKSFIRDIETDPDDATIITAIIRMSHGLRLNVIAEGVENINQLEF 717 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYKRY 657 L K G ++ QGF+ ++P+PA F + + Sbjct: 718 LKKEGCDQMQGFIASRPVPADEFALLLQNW 747 >UniRef50_A1KA22 GGDEF/EAL/PAS/PAC/GAF-domain containing protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KA22_AZOSB Length = 1006 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 182/641 (28%), Positives = 300/641 (46%), Gaps = 29/641 (4%) Query: 45 QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVG-------RKINKREWAGNASAWH 97 + +S + L V + + +R A Sbjct: 353 DPATSAWHERGARHGYRASAALPLHRGGKVFGVLNLYAGECHAFDEAAQRLLVEMAMDID 412 Query: 98 DTPAVARDLSHGLSFAEQVV----------SEAHSAIVILDSRGN-IQRFNRLCEDYTGL 146 + A +V + I +D + +G Sbjct: 413 FALDRFEQDAERARLAAAIVDSEEKYRELTESINDVIWTVDPETRCFSYVSPAMRRLSGY 472 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFR-------SGNAYEVELWIPTCKGQRLFL 199 H++I + +L A R S + E+ + G ++ Sbjct: 473 APHELIDAPIERLLKPEYVAEMRERMALHLAEFHVGKRKSEDYSVEEVELGRRDGGTVWA 532 Query: 200 FRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA- 258 + + DI+E R A+ ++ LA+ D +TGLPNR+ ++D +A Sbjct: 533 EVVTTLGLNRRSGRVEFRAVARDISERRAAEAEIQRLAHYDQLTGLPNRSLVKDRFRYAA 592 Query: 259 -INHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDE 317 + ++ V++ DLD+FK +ND GH FGD+LL +V+ + S L + R GGDE Sbjct: 593 SLTQRRRGQLAVMFFDLDHFKNINDTLGHDFGDRLLVEVARRLESVLRGGDTVCRLGGDE 652 Query: 318 FLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 F+ L +T +A+++L + P + E+ + S+GIA+ P+ G+D + R+A Sbjct: 653 FVFLLPDTDAEGAARVAAKLLEAVAQPLVLDHQELTVTPSIGIAMYPDDGTDFDTLSRNA 712 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEV 436 D AMY AK GR F FT M R L L LR AL+ Q +HYQP+++ G V Sbjct: 713 DAAMYQAKREGRNGFRFFTEAMQARSTRTLLLANALRHALDRGQFSLHYQPQVSLADGRV 772 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRV 495 EAL+RW PE G + P +F+ AE +GLI +G WV+ + V Q +W D+G+ L + Sbjct: 773 VGAEALLRWTHPEFGPVSPGEFVPIAESNGLIAQIGEWVLREAVAQSRRWLDEGLPPLVM 832 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 AVN+SA Q + + + QV++E +++ELTE+ +++ + A+ V+ G Sbjct: 833 AVNLSAAQFRNPNLPELVSQVIEEAGLPPHQVELELTEAVAMDDPQSAVRVMDALFARGI 892 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 ++ +DDFGTGYSSL L RF + +K+DQ FVRDI P +++V AI+ +A +L + + Sbjct: 893 RMSIDDFGTGYSSLGYLKRFKVGKLKIDQSFVRDIGDDPDDKAIVSAIIHLAGSLGMLTV 952 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 AEGVE+ + FL + G + QG+ F++P+PA AF + + Sbjct: 953 AEGVETLDQLDFLRQQGCDTVQGYYFSRPLPAEAFVGYLQE 993 Score = 58.7 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 48/165 (29%), Gaps = 14/165 (8%) Query: 79 LVGRKINKREWAGNASAWHDTPAVA-RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFN 137 L+G G R+L + + +D G + Sbjct: 97 LLGLAGTGALLFGGVLLLRARVRARTRELEGVNRQLGATLDAIPDLLFEMDGEGRYLAVH 156 Query: 138 RLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA-Y----EVELWIPTC 192 E ++G+ V ++ A A++ +G + ++E+ I Sbjct: 157 ANREAQLQRPVEALLGRRVDEVLP----APAAQTCLAALAEAGRHGWSSGQQIEITI--- 209 Query: 193 KGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 Q + + I DIT RRA+ ++ L+ Sbjct: 210 DNQPQWFELSV-ARKADDGGPAHFIVLSRDITARRRAEASVQRLS 253 >UniRef50_Q221U3 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q221U3_RHOFD Length = 1037 Score = 806 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 183/570 (32%), Positives = 303/570 (53%), Gaps = 8/570 (1%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS-RGNIQRFNRLCEDYTGLKEHD 150 + + + DL + + A+ I G N E TG + + Sbjct: 468 RFADERERKIMQDDLRDSEERYRKAFQTSPDAVNITRLVDGLYVDVNTGFERITGWRHDE 527 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 V+G++ +L + A R G +E G + Sbjct: 528 VVGKTATELNLWG-NPADRMRLVDALQSEGRCNNLEATFVKKNGDIFHGLMSAEKVRFKD 586 Query: 211 KNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVG 268 ++ DITE++ A+ +++ LA+ D +TGLPNR+ + D +A++ A + ++ Sbjct: 587 --VDCILSITRDITEKKLAEAQIQQLAHFDQLTGLPNRSQLHDRFRYALSLAQRHGDQLA 644 Query: 269 VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS 328 +++LDLD+FK +ND GH GDQLL DVS + + L + L+R GGDEF++L T ++ Sbjct: 645 IMFLDLDHFKNINDTLGHSVGDQLLVDVSRRLKAALREEDSLSRLGGDEFILLLPGTDEA 704 Query: 329 ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGG 388 +A+++L + P +I E+ ++ S+GIAL P G D + ++AD AMY K+ Sbjct: 705 QASQVATKLLAAVAQPCQIEQNELVSTVSIGIALYPNDGQDFETLSKNADAAMYRVKQAS 764 Query: 389 RGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQS 447 R F FT EM L L LR AL + +H+QP++ G + EAL+RW+ Sbjct: 765 RNDFRFFTQEMQTHSARTLQLVNALRHALPRHEFELHFQPQVALQDGHIVGAEALLRWRH 824 Query: 448 PERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLAD 506 PE G+I P +FI AE+SG I+ +G WV+ VRQ+ +W D G+ + +AVN+SA Q Sbjct: 825 PELGMISPAEFIPIAEDSGQILAIGEWVLRTAVRQLKQWLDAGLRPMVIAVNLSAVQFRH 884 Query: 507 QTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY 566 + + ++L E +++ELTE+ +++ A++++ + + G ++ +DDFGTGY Sbjct: 885 PNLMALVTRILDEAALPPEFLELELTEAAAMDDPPAAIAIMNKLDEHGIRMSIDDFGTGY 944 Query: 567 SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDA 626 SSLS L +F ++ +K+DQ FVRDI P +++V AI+ +A +L + IAEGVE+A + A Sbjct: 945 SSLSYLKKFKVNKLKIDQSFVRDISDDPDDKAIVTAIINLASSLGMHTIAEGVETASQLA 1004 Query: 627 FLTKNGINERQGFLFAKPMPAVAFERWYKR 656 FL G +E QG+ +KP+P FE + + Sbjct: 1005 FLRLQGCDEVQGYYVSKPLPKDQFEAFVRN 1034 Score = 49.5 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 15/182 (8%), Positives = 44/182 (24%), Gaps = 26/182 (14%) Query: 58 TVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVV 117 + + + L V + + A + + Sbjct: 145 VALAALFSVLLAYSAKQAGAARVRANELQVDVNAQAVELVALN----------QRLQSTL 194 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGL--KEHDVIGQSVFKLFMSRREAAASRRNNRV 175 + D G +++G+++ ++ + Sbjct: 195 DALPDLLFETDMDGRYLA----------YHSPRSELLGKTLHRVLPVAVADICLAAVHEA 244 Query: 176 FFRSGNAYEV-ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 + ++ + G + + G + I DITE ++A+ ++ Sbjct: 245 --NAVGYSHGKQIQLALPDG-AHWFELSASRKPGLPGDAPTFIVLSRDITERKKAEIKIE 301 Query: 235 IL 236 L Sbjct: 302 RL 303 >UniRef50_B8CH18 Sensory box protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CH18_SHEPW Length = 1073 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 185/601 (30%), Positives = 308/601 (51%), Gaps = 8/601 (1%) Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 +++ + D ++ L E ++A + + L A V + Sbjct: 457 TIVNDVEEMAKDPNLQLNIEIKGNDELTQISTALNQMLSERMLARTSLQQASAVFEHSSE 516 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 I++ ++ I+ N TG +V GQ L S + N Sbjct: 517 GIMVTNADNRIELVNPAFTKITGYTLEEVKGQKPSVL-SSNHHQPEFYSQLWHSITTTNH 575 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 +E E+W G + + + I D++ ++ ++ L +N DS+ Sbjct: 576 WEGEIWNKRKDGNVYPEYLSITAVENAQGQISQYIGLFLDVSNHKQYEQDLWYKSNYDSL 635 Query: 243 TGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 T LPNR+ + HAI+ A N++V V ++DLD FK +N+ +GH G+++L+ + + Sbjct: 636 TKLPNRHQFSSRLQHAIDGASQTNSQVAVFFIDLDRFKFINELHGHAAGNEILKQSATRL 695 Query: 301 LSCLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 S L + +AR GGDEF++++ + E +A +++ L P ++ IE S SVG Sbjct: 696 ESVLGPEDSIARFGGDEFVIISPQHNAIETAEQLAHKLVDVLVQPLKLDAIESNISASVG 755 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 IA PE G D ++R+++TAMY AK GR F F+PEMN + E + L+ LRKA++ Sbjct: 756 IAFYPEDGQDIEMLLRNSETAMYQAKRDGRAHFQYFSPEMNVEMLERMQLEQRLRKAVKK 815 Query: 420 DQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILD 478 + + YQP + G V S+EAL+RW+ PE G+I P FI AEE+GLI PLG WV+ Sbjct: 816 SEFYLEYQPVVDMTHGTVSSVEALIRWRDPEFGIISPALFIPIAEETGLIEPLGEWVLNQ 875 Query: 479 VVRQVAKWRDKGINLRVAVNISARQLADQT---IFTALKQVLQELNFEYCPIDVELTESC 535 + ++ W +G L++A+N+S RQ + + L++ L + +E+TES Sbjct: 876 ALADLSSWHAQGHMLKIAINVSGRQCINSNGLSFYQVLEEALLRHKIAAHYVHIEITESL 935 Query: 536 LIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPV 595 LIE+ +L ++Q LG ++LDDFGTGYS+LS L +FPI IK+D+ F+ + Sbjct: 936 LIEDKPYSLEILQSIRNLGVDIYLDDFGTGYSALSYLNQFPISVIKIDKSFIDNATVSQS 995 Query: 596 SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 LV+AIV + Q+L + ++AEG+E+ ++ FL G N QG+L +KP+ + + + Sbjct: 996 DAKLVKAIVMMGQSLEMTLVAEGIETEEQWDFLQSLGCNYAQGYLMSKPLSSENLLTFLE 1055 Query: 656 R 656 Sbjct: 1056 N 1056 >UniRef50_B8HP13 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Cyanobacteria RepID=B8HP13_CYAP4 Length = 1094 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 196/684 (28%), Positives = 328/684 (47%), Gaps = 36/684 (5%) Query: 1 MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTET----TEPDRTLQLSAEQAARIRE 56 ++T E ++ L + Y+R+ S +L F EP+ L Sbjct: 400 LQTTSELKAIFQALP--DLYFRVDHDSTILDFKAGRRTDLYLEPEEFLGRRMTDVLPPPV 457 Query: 57 MTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGN--------ASAWHDTPAVARDLSH 108 T + ++ L+ + +++ ++ + A + + Sbjct: 458 ATQFSGAIDRILSGEARVDLEYVLPMPDGEQTFEARLLPLLQTQIIAVIRNITKRKRAEN 517 Query: 109 GLSFA----EQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL-KEHDV------IGQSVF 157 L A + A I G+ N G ++ IG+ ++ Sbjct: 518 ELRQAEEKYRSIFENATEGIFQSSPSGSYISANPALARIYGYDSPQELQHHLTDIGRQLY 577 Query: 158 KLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLI 217 ++ G + E + G +++ N N ++ Sbjct: 578 V------NPDRRQQFVHSILEQGQVTDFESQVYRKDGSVIWISENARAVRDRQGNILYFE 631 Query: 218 CSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLD 275 + DI+ ++A+ + A D +TGLPNR D ++ A+ A + + V +LDLD Sbjct: 632 GTVEDISARKQAELTIHYQAFHDLLTGLPNRALFDDRLNQALADARRYQHLLAVFFLDLD 691 Query: 276 NFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALE-AMA 334 FK +ND GH GDQLL+ V+ +L CL +AR GGDEF +L + A +A Sbjct: 692 RFKVINDTLGHAIGDQLLQQVAQRLLPCLREIDTIARWGGDEFTLLLPHVQTPADSVKIA 751 Query: 335 SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCV 394 R+L L+ PF + ++ + S+GIAL P G D T ++R+AD A+Y AKE GR Sbjct: 752 ERLLASLKPPFSLKGHNLHITASLGIALYPHDGEDGTTLLRNADAALYRAKEEGRNGLYC 811 Query: 395 FTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLI 453 +TP +N R E L L++ L KALE +L ++YQP+I GE+ LEALVRWQ + GL+ Sbjct: 812 YTPMLNSRGHELLALESELHKALEQQELDVYYQPQINAATGEILRLEALVRWQHSQLGLV 871 Query: 454 PPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTA 512 P FI AEE+GLI+P+G+WV+ Q +W+ +G L AVN+S RQ + Sbjct: 872 SPQTFIGLAEENGLIMPIGQWVLETACHQCRQWQARGFPGLGTAVNLSVRQFQQPHLVQQ 931 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + + LQ +++E+TE+ ++N L +++ + Q+G + LDDFG+GYSSL+ L Sbjct: 932 VAETLQYTGLAADRLELEITETTAMQNVNLTRTLLHELDQMGVGIALDDFGSGYSSLNYL 991 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 +FP+ +IK+D+ F++++ Q++V+A++A+ + LNL V+AEGVES + L G Sbjct: 992 RQFPLHSIKIDRTFIQELPYSVQDQAIVKAVIALGRGLNLSVVAEGVESQSQLKVLRSLG 1051 Query: 633 INERQGFLFAKPMPAVAFERWYKR 656 + QG+ F P+ A A + ++ Sbjct: 1052 CDIIQGYFFGPPIAAAAMTQLLEQ 1075 Score = 115 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 27/238 (11%), Positives = 58/238 (24%), Gaps = 12/238 (5%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 TV + + L ++P +S+ P Q+ I + Sbjct: 171 TVLYHSPVLKRLLGYHPQNCEGKSA-------FGLVHPQDRKQVQQTFQQAITHTEFTLT 223 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA----EQVVS 118 D S + GR + + L A + Sbjct: 224 VEYRFRHQDGSWRFLESTGRNLLADPAVAGIVVNTRDITDHKRTESALRQAEEKYRSIFE 283 Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGL-KEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 A I G R N G +++ + R+ Sbjct: 284 NAVEGIFQSSPEGRYIRVNPALARMYGYDSPEELLAHLTDIGRQLYVDPERRAEFQRLID 343 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + E + G +++ + ++ + +IT+ +R + +L Sbjct: 344 QQTIVTHFEAQVYRRDGSIIWITEHARAVRDGTGKLLYYEGTVENITDRKRTELQLLQ 401 Score = 84.2 bits (208), Expect = 2e-14, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 73/237 (30%), Gaps = 9/237 (3%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 +++ + L ++ + + T P+ ++ A +A I Sbjct: 42 SMQYLSRGCLALTGYSSDELAQKGGEAFN----AITHPEDLPRVLATLSAAIASSEPYEV 97 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGL----SFAEQVVS 118 + E + R +++ + + + L + ++ Sbjct: 98 EYRIRTKSGEEKWVLEKGHRVLDEDQCTCGIEGFITDITPLKRAEAALIQAEARWRSLIH 157 Query: 119 EAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 + I ILD++G + + + + G + G+S F L + + + Sbjct: 158 NSSDLITILDAQGTVLYHSPVLKRLLGYHPQNCEGKSAFGLVHPQDRKQVQQTFQQAITH 217 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 + VE G FL + ++ + DIT+ +R + LR Sbjct: 218 TEFTLTVEYRFRHQDGSWRFLESTGRNLL-ADPAVAGIVVNTRDITDHKRTESALRQ 273 Score = 64.9 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 8/141 (5%) Query: 99 TPAVARDLSHGLSFAEQVVSEAHSAIVIL---DSRGNIQRFNRLCEDYTGLKEHDVI--- 152 + ++ S +++ IV D++ ++Q +R C TG ++ Sbjct: 7 IQSEDKEFLAYTSRFLRLIDSLP-GIVFSGSNDAQWSMQYLSRGCLALTGYSSDELAQKG 65 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G++ + S YEVE I T G+ ++ + Sbjct: 66 GEAFNAITHPEDLPRVL-ATLSAAIASSEPYEVEYRIRTKSGEEKWVLEKGHRVLDEDQC 124 Query: 213 EIFLICSGTDITEERRAQERL 233 + TDIT +RA+ L Sbjct: 125 TCGIEGFITDITPLKRAEAAL 145 Score = 61.4 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 68/237 (28%), Gaps = 22/237 (9%) Query: 6 ESTTLYNFLGSHN-PYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSL 64 + ++ P L +D+ +P+R AE I + T++T Sbjct: 300 RVNPALARMYGYDSPEELLAHLTDI---GRQLYVDPER----RAEFQRLIDQQTIVTHFE 352 Query: 65 MMSLTVDESDLSVHLVGRKINKR-----EWAGNASAWHDTPAVARDLSHGLSFAEQVVSE 119 D S + + R + + G D L S + + Sbjct: 353 AQVYRRDGSIIWITEHARAVRDGTGKLLYYEGTVENITDRKRTELQLLQTTSELKAIFQA 412 Query: 120 AHSAIVILDSRGNIQRFNRLCEDYTGL-KEHDVIGQSVFKLFMSRREAAASRRNNRVFFR 178 +D I F + + + +G+ + + Sbjct: 413 LPDLYFRVDHDSTILDF-KAGRRTDLYLEPEEFLGRRMTDVLPPPVATQ-FSGAIDRILS 470 Query: 179 SGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 ++E +P G++ F R + +I +IT+ +RA+ LR Sbjct: 471 GEARVDLEYVLPMPDGEQTFEARLLPLLQ------TQIIAVIRNITKRKRAENELRQ 521 >UniRef50_D0IUW1 Diguanylate cyclase/phosphodiesterase with n=3 Tax=Comamonadaceae RepID=D0IUW1_COMTE Length = 900 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 196/647 (30%), Positives = 316/647 (48%), Gaps = 15/647 (2%) Query: 24 TESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRK 83 S+ + E D +L E AA R L + L + R Sbjct: 241 GMSALLRYQGQDLAREFDFHQRLHPEDAAGARAQAEQALEQGSMLVLTARLLCFDGLYRW 300 Query: 84 INKREWA--------GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQR 135 R A S +R+ A VV +V+ D+ I Sbjct: 301 FRARGQAYKDESGRLIRISGLLSDQTASREADERSRLASTVVDNTIEGVVVTDAHSRILS 360 Query: 136 FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQ 195 N G E +++G++ R + A + ++ E+W G+ Sbjct: 361 VNHAFTKLLGFSEAEMLGKTPRMFKSGRHDKA-FYDAMWASMHATGHWQGEIWNRRKNGE 419 Query: 196 RLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLI 255 + + +C TDI+ E+ +++L LA+ D++TGLPNR+ ++ Sbjct: 420 VFPERMSLSAVKDANDKVTHYVCMFTDISAEKAREQQLEFLAHRDTLTGLPNRSQFTRML 479 Query: 256 DHA--INHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 A ++ + N ++ V+ ++D FK VND+YGH GD++LR VS+ + L H ++ R Sbjct: 480 GEAVELSQSTNRRMAVLLFNIDRFKDVNDSYGHSIGDEVLRHVSVQMQGALRHGDIIGRL 539 Query: 314 GGDEFLVLASNT-SQSALEAMASRILTRLRLPFRI-GLIEVYTSCSVGIALSPEHGSDST 371 GDE V+A + + + +A R++ P+ + V S S GI L P+H + Sbjct: 540 AGDEICVVAQSICGRDSAVDVAERLMAAAGQPWTTPDGLSVVVSVSAGICLYPDHALTAD 599 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 +++ A A+Y AK G +C F M Q E L L+ LR+ALE + ++YQP+I Sbjct: 600 DLLQGAHAAVYGAKARGSNAWCFFHENMTQAARERLALEARLRRALELGHMRLYYQPQIE 659 Query: 432 W-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 G + EAL+RW PE GLI P FI AE SG+I PLG WV+ + RQ +WR G Sbjct: 660 LATGRLVGAEALLRWLDPEEGLISPARFIPVAENSGVIGPLGLWVLGEACRQGQQWRAAG 719 Query: 491 IN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 + L +AVN+S Q I A + L + F +++E+TES L E E AL+V+ + Sbjct: 720 LPDLAIAVNVSLHQFLLTDIAGATAEALNKSGFPASLLELEITESALAEKPEEALAVLNR 779 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 +LG ++ +DDFGTGYSSL+ L RFP+D +K+DQ F+RDI ++ +++A+ A Sbjct: 780 LRELGLRLAIDDFGTGYSSLAHLKRFPLDLLKIDQGFIRDIPHSADDMTISSSVIALGHA 839 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 + L+V+AEGVE+ ++ +FL + G + QG+ ++P+PA F R ++ Sbjct: 840 MGLKVLAEGVETQEQLSFLQQKGCDYFQGYFCSRPLPAEDFTRLLEK 886 Score = 47.2 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 26/237 (10%), Positives = 63/237 (26%), Gaps = 7/237 (2%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTTET---TEPDRTLQLSAEQAARIREMTVI 60 + + + + VL + + R L S + +R+ Sbjct: 106 IVWANAKLAGWLGCSVESLRGQDFRVLVPVNDQDDVALQLQRLLDGSTDYFQVLRQCVNA 165 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA 120 + + + S ++ V + + + + + + Sbjct: 166 DTGKVTPVLCTTSRVAASGV---DGPVALVCVLQDLSEMVSARNAMMRSETMLRLALEGS 222 Query: 121 HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG 180 + + D+ F+ + D+ + F + +AA +R G Sbjct: 223 GNGVWEWDALEQRLNFSTGMSALLRYQGQDLAREFDFHQRLHPEDAAGARAQAEQALEQG 282 Query: 181 NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + + + G + + I + +D T R A ER LA Sbjct: 283 SMLVLTARLLCFDGLYRWFRARGQAYKDESGRLIRISGLLSDQTASREADER-SRLA 338 >UniRef50_Q2BPB1 Regulatory component of sensory transduction system n=2 Tax=Gammaproteobacteria RepID=Q2BPB1_9GAMM Length = 885 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 174/656 (26%), Positives = 305/656 (46%), Gaps = 13/656 (1%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + H + ++ S T+ TLQ+ I + I Sbjct: 235 CNKAFQSFTGHQEADLIGKTDQDFSESNHAITDKSDTLQV-------INNLLPINREAWT 287 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 L + ++ R + Q V ++ ++VI Sbjct: 288 HEQDGSPILLESQLAPFLDMDGEPQGIVGISRDITEKRKAEERILTLSQAVEQSPVSVVI 347 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 + +G ++ N E TG + +V+G+ L S + + G +++ E Sbjct: 348 TNLKGEVEYVNSTFESVTGYSQAEVLGKDSSIL-KSGKTPPGRYADMWAKLVQGESWQGE 406 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 G+ + + + + D+T+++ +E++ A+ D +T LP Sbjct: 407 FQNKKKNGEIFWEQAHIAPVLDAEGEVRHFLAVKQDVTKQKAQEEKILHQAHFDGLTELP 466 Query: 247 NRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR ++ ++ A +++ V++LD+D+FKKVND GH GD++L + + + + Sbjct: 467 NRFLAMHRLETMMHEAKRNQHQIAVLFLDMDDFKKVNDTLGHDMGDKILVEAAKRLQGSV 526 Query: 305 EHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 + R GGDEF+VL ++ + +A +L + R I ++ + S+GIAL Sbjct: 527 RDSDTIGRLGGDEFIVLINHLERPEQALPIAQNLLQQFRSSLTIDGRDILLTMSIGIALY 586 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P G+ + ++R+AD+AMY +K GR F +T EMN L L+ L AL+ ++L Sbjct: 587 PGDGTTPSELLRNADSAMYHSKAAGRNSFHFYTQEMNIEANRRLQLEEQLHNALDRNELR 646 Query: 424 IHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 + YQP + + + EAL+RW S E G I P +FI AE +GLIV +G++V+ D +R Sbjct: 647 LLYQPVVDLKTRKIVGAEALLRWDSKELGAISPEEFIPVAEHTGLIVEIGKFVLDDALRT 706 Query: 483 VAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDE 541 ++W I +A+N+S RQ D + ++ + E +++E+TE L+ Sbjct: 707 TSRWIKTFIPDFHIAINLSPRQFRDPHLIDNIESFVNSYGLEGRNLELEITEGVLMSQHA 766 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 I + +Q G + +DDFGTGYSSLS L +P + +K+D+ F+ DI LV Sbjct: 767 DVEEAIAKLTQKGISISMDDFGTGYSSLSYLRSYPFNILKVDRSFINDISVDAADLELVN 826 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 A + +A L L+VIAEGVE+ ++ A L + + QG+ F+KP+PA E K+ Sbjct: 827 ASIDMAHGLGLKVIAEGVETEEQTALLLRKNCDMAQGYYFSKPIPADELEEILKKQ 882 Score = 96.1 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 69/221 (31%), Gaps = 8/221 (3%) Query: 17 HNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLS 76 + + L F L + R + + I ++++ + L Sbjct: 123 YIEKHNKALTWWRLYFLGLSVQITVLCLMFFMPEHLRYKIIAAIAPTILIFYPIGTMLLG 182 Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF 136 + L ++ A + + L+ ++ I I D G Sbjct: 183 MILSRQE-------ERRLAERELHISRQILNRERGLLRGLIDALPDHIFIKDKEGKYLGC 235 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR 196 N+ + +TG +E D+IG++ S + + E W G Sbjct: 236 NKAFQSFTGHQEADLIGKTDQDFSESNHAITDKSDTLQ-VINNLLPINREAWTHEQDGSP 294 Query: 197 LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 + L ++ DITE+R+A+ER+ L+ Sbjct: 295 ILLESQLAPFLDMDGEPQGIVGISRDITEKRKAEERILTLS 335 >UniRef50_Q2W7U0 Predicted signal transduction protein containing a membrane domain n=3 Tax=Magnetospirillum RepID=Q2W7U0_MAGSA Length = 831 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 171/567 (30%), Positives = 279/567 (49%), Gaps = 6/567 (1%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 LS + V A + D+ I N TG + IG Sbjct: 18 QRRVEELSQQVERLSLYQAVFDNAFEGMFATDAANRIIAVNPAFTAITGYAAEEAIGNDP 77 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 L + A + + ++ E+ G+ + L+ + G+ Sbjct: 78 RMLSSGFHDPA-FYQEMWDQLSTTGQWQGEVVDRHKDGRPVRLWLSITSQRGADGKVARR 136 Query: 217 ICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDL 274 I D+TE R E+L +N D +T LPNRN D + A+ A +KV ++++ L Sbjct: 137 IAVFRDVTEARETAEQLWQRSNFDPLTELPNRNLFLDRLLQALVLAGREGSKVAMLFIGL 196 Query: 275 DNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAM 333 D FK +ND+ GH GD++L++ + +CL AR GGDEF V+ S + +EA+ Sbjct: 197 DGFKNINDSLGHWIGDKVLQEAARRFQNCLRQGDTAARFGGDEFTVVLSGVRATAEVEAV 256 Query: 334 ASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFC 393 +L L+ PF + + SCS+G+ + P G D +++R+A A+ AK+ GR F Sbjct: 257 IRSVLEVLQEPFVVEHHHILISCSIGVCMWPGDGEDVDSLMRNATAALQQAKQAGRNTFR 316 Query: 394 VFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGL 452 FTP M+ R L L AL + + +QP + G+V + EAL+RW + G+ Sbjct: 317 FFTPAMDARAQARSRLADELSGALSQGEFHLVFQPLVDVKSGKVNAAEALLRWHNRYLGV 376 Query: 453 IPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFT 511 + P F+ AEE GLI P+G W++ R+ W+ G+ + +AVNIS RQ I Sbjct: 377 VSPDQFVPLAEEIGLIRPIGEWLLTAACREALVWQGMGLGEINIAVNISPRQFQQGDIVG 436 Query: 512 ALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQ 571 +++ L++ + +E+TE L+ N E L+ ++ LG + +DDFGTGYSSLS Sbjct: 437 IIRRALEDTRLPPWLLTIEITEGLLLSNGEEILAKMEAIRTLGVSLSVDDFGTGYSSLSY 496 Query: 572 LARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKN 631 L FP+D +K+D+ F+ D+ ++V AI+A+ +L+L+V+AEGVE+ ++ F+T Sbjct: 497 LKSFPVDVLKIDRSFIADMGDHSDDATMVEAIIALGHSLHLEVVAEGVETKQQLDFITAQ 556 Query: 632 GINERQGFLFAKPMPAVAFERWYKRYL 658 G + QG+ F+ P+ F + L Sbjct: 557 GCDVAQGYYFSPPLSGPRFREFVLERL 583 >UniRef50_A1ATC4 Periplasmic sensor diguanylate cyclase/phosphodiesterase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ATC4_PELPD Length = 876 Score = 804 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 178/562 (31%), Positives = 297/562 (52%), Gaps = 10/562 (1%) Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSR-GNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 A ++ V+S+A I+++D I N + +++ + Sbjct: 301 ASRKERKDTEKRYRSVISQASDIILLVDIDSRRILEANLAFQRLLNYAPDKATQLTLYDI 360 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 R R + E + G + + N + S + I ++ Sbjct: 361 MEDDRSGVDWR--INRILSEKVCFLGEHTVRAEDGSMVEVDLNANLVSYGEQQVICMV-- 416 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNF 277 DI+E +R + L +A+ D++TGLPNR D + + + + + V+YLDLD F Sbjct: 417 LRDISERKRFEGELMHMAHHDALTGLPNRTLFFDRLRQGLYKKERSGKMLAVIYLDLDRF 476 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEA-MASR 336 K +ND GH GD LL++V+ + + ++R GGDEF ++ + A +A + Sbjct: 477 KIINDTLGHHTGDMLLKEVADRLRGVVRKADTISRLGGDEFTIIIDEIATPADSLLVAEK 536 Query: 337 ILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFT 396 IL PFR+ E++ + S+G+ L P G + ++++ADTAMY AKE GR + F+ Sbjct: 537 ILHVFSAPFRLEKHEMFITASMGVTLYPNDGDTAEKLLKNADTAMYHAKEEGRNTYQFFS 596 Query: 397 PEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPP 455 EMN RV E L ++T LR AL ++ ++HYQP++ G + +EAL+RWQ P++GLI P Sbjct: 597 EEMNSRVSERLSMETGLRHALARNEFLLHYQPRVNTTTGRIVGVEALIRWQQPQKGLILP 656 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALK 514 FI AEE+GLI+P+G WV+ + Q W++ G +R++VNIS RQ + ++ Sbjct: 657 DAFIPLAEETGLIIPIGEWVLRNTCTQARAWQEAGFAQMRISVNISCRQFTHDNLPDTIR 716 Query: 515 QVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLAR 574 +L+E + +++E+TES ++ N E A+S++ + ++G + +DDFGTGYSSLS L R Sbjct: 717 GILRETGLQPSCLELEITESVIMLNPERAISLLNELKEMGISIAIDDFGTGYSSLSLLKR 776 Query: 575 FPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGIN 634 P D +K+D+ FV I ++LV I+ + + L ++AEGVE ++ FL + Sbjct: 777 LPADILKIDKSFVSGIPGNKSDETLVATIINLGHNMGLGLVAEGVERQEQLHFLEERNCQ 836 Query: 635 ERQGFLFAKPMPAVAFERWYKR 656 E QG+ F+KP+PA + K Sbjct: 837 EVQGYYFSKPLPAETLQPLLKN 858 >UniRef50_A8H6Y6 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=13 Tax=Proteobacteria RepID=A8H6Y6_SHEPA Length = 1064 Score = 804 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 198/642 (30%), Positives = 332/642 (51%), Gaps = 12/642 (1%) Query: 22 RLTESSDVLRFS---TTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVH 78 L D L ++ P+ +++ A + T T+ L + Sbjct: 362 LLGCDIDTLNRQQKLWGDSIHPEDRVRVLRSIKAHLSGETEQHKVEYRIRTLASETLWIL 421 Query: 79 LVGRKINKREWA--GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF 136 G+ +++ E H + + L A V + + A+ + D +G I Sbjct: 422 DSGKVMSRDESGCPLRMCGIHTDITDRKRVEESLKLAASVYNNSREAMSVQDDKGLIINI 481 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQR 196 N D TG E +V Q++ L SR +A + + ++ E+W+ G+ Sbjct: 482 NAAFTDITGYTESEVKNQNIKILQCSRNNRSAYEQ-MHMAVEEEGRWQGEVWLRRKNGEE 540 Query: 197 LFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLID 256 ++ + + +DITE+++A++ + AN D++TGLPNR + D ++ Sbjct: 541 FVVWLTLNALFDAEAQTQRHVALFSDITEKKQAEKIIWKQANYDTLTGLPNRRMLLDYLN 600 Query: 257 HAI--NHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPG 314 I + + +++LDLD FK+VND GH GD LL + + + +C+ V+AR G Sbjct: 601 AEILKSDSREQHFALMFLDLDYFKEVNDTLGHDMGDMLLSEAAKRLKACIRDSDVVARLG 660 Query: 315 GDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAI 373 GDEF ++ S + ++ +A ILTR+ P+ +G Y S S+GI L P+ S + Sbjct: 661 GDEFTIVLSGVTDIKGVDKVAKHILTRIAEPYNLGEETAYISASIGITLYPDDASTIEGL 720 Query: 374 IRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWR 433 ++HAD AMY AK+ GR +F FTP M + + L +LR A+ + + ++YQP ++ + Sbjct: 721 LKHADQAMYAAKDEGRNRFHYFTPSMQRYAKYRMRLIQDLRSAIADHEFELYYQPIVSLQ 780 Query: 434 GEV-RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GI 491 G + EAL+RW+ P+RGL+ P++FI+ AEE+GLI+ +G WV RQ A WRD+ GI Sbjct: 781 GGLGLKAEALIRWRHPKRGLVSPIEFIAVAEETGLIIEIGNWVFQQAARQSALWRDRFGI 840 Query: 492 NLRVAVNISARQLADQT-IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQF 550 +++++N S Q D+ + +L+ LN I +E+TE L++ + S + Q+ Sbjct: 841 EVQISINKSPVQFRDEGESINSWVNLLKTLNLTNNNICIEITEGLLLDGNSAISSKLTQY 900 Query: 551 SQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQAL 610 G Q+ LDDFGTGYSSL+ L +F ID +K+DQ F R++ +L AI+ +A L Sbjct: 901 RDSGIQISLDDFGTGYSSLAYLKKFDIDFLKIDQSFTRNLDSNSDDFTLCEAIIVMAHKL 960 Query: 611 NLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 ++VIAEGVE+ + L G + QG+LF++P+P FE+ Sbjct: 961 GMKVIAEGVETDYQRKILANAGCDFGQGYLFSRPVPVEKFEQ 1002 Score = 58.0 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 38/142 (26%), Gaps = 4/142 (2%) Query: 94 SAWHDTPAVARDLSHGLS---FAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 + RD L + + I I D + N E + Sbjct: 184 ILLSRRIEIERDQKIKLQDHLLFKSHFHSGNMGIAITDIAHEWIKVNPSLCQMLKYTEQE 243 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 ++ S L + R+ N +E++L + ++ Sbjct: 244 LLSLSWLDLMSADDFQLYKHHLLRMLDGRINEFELDLCLIAKDETIVYTHMTVACQR-VQ 302 Query: 211 KNEIFLICSGTDITEERRAQER 232 +I + T ++ A++ Sbjct: 303 SRVELIITGFLNRTSQKEAEKE 324 Score = 54.9 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 65/234 (27%), Gaps = 10/234 (4%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 + + + L+ S L + L RI E + + Sbjct: 228 KVNPSLCQMLKYTEQELLSLSWLDLMSADDFQLY---KHHLLRMLDGRINEFELDLCLIA 284 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 T+ + ++V + ++ V+ + Sbjct: 285 KDETIVYTHMTVACQRVQSRVELIITGFLNRTSQKEAEKEKLASQEQLGLVLGSSELGFW 344 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR----VFFRSGN 181 D R +I N C G + Q KL+ R R Sbjct: 345 DWDIRNDIIERNEHCAALLGCDIDTLNRQ--QKLWGDSIHPEDRVRVLRSIKAHLSGETE 402 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVH-SGSGKNEIFLICSGTDITEERRAQERLR 234 ++VE I T + L++ + V + + TDIT+ +R +E L+ Sbjct: 403 QHKVEYRIRTLASETLWILDSGKVMSRDESGCPLRMCGIHTDITDRKRVEESLK 456 >UniRef50_C4ZM39 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thauera sp. MZ1T RepID=C4ZM39_THASP Length = 920 Score = 804 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 178/616 (28%), Positives = 308/616 (50%), Gaps = 18/616 (2%) Query: 55 REMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAE 114 R + V + + ++ + +G+ E + L Sbjct: 306 RLIEVWATRVRGAIAEIAAGRRDARIGQATGVAELDALSEGIDQMALEIGKREGELQRLS 365 Query: 115 QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 V+ ++ +IVI D+ G I N + TG +V+G++ L A+ Sbjct: 366 MVIEQSPESIVITDTAGCILYVNEAFQRITGYARDEVLGRNPRIL-NGGLTPRATYEQMW 424 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLR 234 +G + E G +G + DIT+ ++++ L Sbjct: 425 ATLLAGEVWRGEFHNVRKDGSAYLELATIAPIKDAGGTVTHYVAVKEDITQRKQSEALLH 484 Query: 235 ILANTDSITGLPNRNAMQDLIDHAINHA-DNNKVG-VVYLDLDNFKKVNDAYGHLFGDQL 292 LA D++TGLPNR + D I AI G ++ +D+D F+++ND GH GD+L Sbjct: 485 RLAYFDALTGLPNRALLHDRIAQAIRSGVRRESFGMLMLVDIDRFRQLNDTLGHAAGDRL 544 Query: 293 LRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSAL------EAMASRILTRLRLPFR 346 L +V+ + + + + +AR G D+F VL ++ E +A ++ L+ P+ Sbjct: 545 LCEVAARLRASVREEDTVARHGDDDFAVLVERIGETEADALSHAEHVARKLQRALQQPYV 604 Query: 347 IGLIE---VYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 +G E + + S GI+L + S ++++ A+ A+Y AK+ GR F PEM V Sbjct: 605 LGGTEGDRHFATLSFGISLFHDGVSSLESLLKQAEVALYRAKQDGRDIVRFFNPEMQAVV 664 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERG--LIPPLDFISY 461 + L+ + +ALE + + +QP++ RG V EAL+RW P G ++ P +FI Sbjct: 665 DAHARLEARMHEALEANAFRLFFQPQVNRRGVVIGAEALLRW--PLDGGAMVSPAEFIPL 722 Query: 462 AEESGLIVPLGRWVILDVVRQVAKWR--DKGINLRVAVNISARQLADQTIFTALKQVLQE 519 AE++G IV LG WV+ Q+A+W+ + +L++AVN+SARQ ++K ++ Sbjct: 723 AEDTGHIVRLGLWVLRSACAQLARWQMNEGTRHLKIAVNVSARQFHQPDFVASVKDSVRA 782 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 + C +++ELTES ++ + + + + + LG + LDDFGTGYSSLS L R P D Sbjct: 783 AAIDPCRLELELTESAILSDVDETIRRMNELRALGIRFALDDFGTGYSSLSYLKRLPFDQ 842 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+DQ FVRD+ + S+++V AI++++ AL L+V+AEGVE ++ FL ++G + QG+ Sbjct: 843 LKIDQSFVRDMAEDESSEAIVLAILSLSHALGLEVVAEGVEMPEQRDFLRQHGCDSFQGY 902 Query: 640 LFAKPMPAVAFERWYK 655 LF KP+P A+ + + Sbjct: 903 LFGKPLPMEAWGDFLE 918 >UniRef50_Q479Q7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479Q7_DECAR Length = 930 Score = 804 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 170/567 (29%), Positives = 291/567 (51%), Gaps = 6/567 (1%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 R H L+ AE V + + +I++ D+ I N +G ++IG Sbjct: 347 ILIRQIQRGRRVAEHQLNLAEAVFANSVESILVTDADQRIVEVNPAFLRISGYSRSEIIG 406 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 Q L R +AA R + + + +E E+W G+ + V Sbjct: 407 QHPRILKSGRHDAAFFARMWQE-LNANDTWEGEVWNRRKNGEIYPALLSIAVVRSQDGKV 465 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVY 271 + D+++++ + L L D +T LPNR + ++ + +A N + ++ Sbjct: 466 VNYTGMIFDLSQQKTVEALLDQLRTFDGLTALPNRESWLSALEQQLANAKRNSSRFSILQ 525 Query: 272 LDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-L 330 LDLD FK +ND+ G+ GDQ+L + + + L ++AR GG+ F +L + + Sbjct: 526 LDLDRFKAINDSMGYSVGDQVLIEAAERVKVSLRKYDIVARLGGNRFSILLNEIVDPQTI 585 Query: 331 EAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRG 390 + ++LT PF++G I + S S+G+A+ P G DS ++ A++A+Y+AK GR Sbjct: 586 GGICEKLLTAFARPFQMGGINAHISASIGVAIFPNDGLDSKTLMMAAESALYSAKADGRN 645 Query: 391 QFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPE 449 + ++ EMN+ L+ LR AL+ ++ + YQP++ GE+ +EAL+RW +PE Sbjct: 646 LYKYYSHEMNEMGTHLFKLERMLRVALDRNEFSVVYQPQVNAKNGELVGVEALLRWHNPE 705 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDK-GINLRVAVNISARQLADQT 508 G + + FI AEE+GLIV +G WV+ Q W+ + G + VAVN+SARQ Sbjct: 706 LGNVSAVQFIPVAEETGLIVSIGEWVMRAACHQARTWQTELGFEIPVAVNLSARQFRRND 765 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + +++ +L E +++E+TE LI + A+ +++ + LG + LDDFGTGYSS Sbjct: 766 LLASVQTILDETGLPNRLLELEITEGSLIVDPIGAIDIMRGLNCLGIKTALDDFGTGYSS 825 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 L+ L FP++ +K+D+ FVRD+ ++ I+A+ LN++V+AEGVE+ + FL Sbjct: 826 LAYLKAFPLNRLKIDRAFVRDLPDNESDCAISNTIIALGLNLNMEVLAEGVETEAQRDFL 885 Query: 629 TKNGINERQGFLFAKPMPAVAFERWYK 655 G QG+LF KPM + + Sbjct: 886 AAAGCQVFQGYLFGKPMSGEDLTQRLQ 912 >UniRef50_Q5NZD7 Putative signal transducer protein with histidine kinase domain n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NZD7_AZOSE Length = 920 Score = 803 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 201/671 (29%), Positives = 323/671 (48%), Gaps = 24/671 (3%) Query: 9 TLYNFLGSHNPYWRLTESSDVLRFSTTETTEP-------DRTLQLSAEQAARIREMTVIT 61 + ++ + + L E+ L+ R + Sbjct: 251 SFFSRSAPYGWTAAVGVPQSALTAGLAESLRQYAVGALALLLGGLALAGLLGRRIARPVQ 310 Query: 62 SSLMMSLTVDESDL----SVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVV 117 + + +L + + + L R A H A L+ A + Sbjct: 311 ALVAPALAIGRGEPVSLPPLALEEADEVGRALAQAQELLHQREADRAQAEEKLALAATAL 370 Query: 118 SEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFF 177 A +VI G I NR TG + +VIGQ + L R + R Sbjct: 371 DSAVEGVVIA-RGGRIATVNRAFTSITGYRSAEVIGQPLAILLAE--AEKTHRNDRRRAM 427 Query: 178 RSGNAYEVELWIPTCKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 ++ E+ G+ + + GS + L+C +DI+ ++ + RL+ L Sbjct: 428 CETGQWQGEVHGRRKNGEMYPAWSSISRAAYGSDEMI--LVCVFSDISAAKQYEARLQHL 485 Query: 237 ANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLR 294 A+ D++T LPNR ++ + + A+ + + ++++DLD FK +ND GH GD+LLR Sbjct: 486 AHYDALTELPNRLLFRERLADMLVRAERHGNMLALLFIDLDGFKPINDTLGHAAGDELLR 545 Query: 295 DVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEV- 352 V+ + C+ AR GGDEF VL S +A IL L P+ + Sbjct: 546 RVAERLGGCVRASDTTARLGGDEFAVLLDELRSPEEAGIIARNILDTLERPYILAGQPQC 605 Query: 353 -YTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDT 411 Y S S+GI P D+ ++R AD AMY AK+ G+ ++ F PE+N + E L++ Sbjct: 606 QYISASIGIGCYPSDSLDAETLLRQADMAMYRAKQEGKNRYRFFAPEINAQASERLFMAN 665 Query: 412 NLRKALENDQLVIHYQPKIT-WRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP 470 +LR AL+ D+L + +QP + EV +EALVRW+ P++G I P FIS AEESGLI P Sbjct: 666 SLRAALDRDELRLVFQPCMDFATLEVAGVEALVRWEHPQKGTILPSRFISLAEESGLIEP 725 Query: 471 LGRWVILDVVRQVAKWRDKG-INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDV 529 +G WV+ + R+V +W++ G RVAVN+S RQ + + L VL E +++ Sbjct: 726 IGEWVLREAARRVREWKNAGIFAGRVAVNLSPRQFRRSDLASRLLVVLDEAGLAPRDLEL 785 Query: 530 ELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRD 589 E+TE ++E+ E A+ V+ + G + +DDFGTGYSSL+ L RFP+ ++K+D+ FV Sbjct: 786 EVTEGMIMEHPERAVVVLTELVAAGVSISIDDFGTGYSSLAYLKRFPVHSLKIDRSFVSG 845 Query: 590 IHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVA 649 + +SL RA+VAVA++L L V+AEGVE A + FL + G + QG F++P+ A Sbjct: 846 LPGDRNDRSLTRAVVAVAKSLGLSVVAEGVEHAGQVDFLRRIGCDFAQGHYFSRPLDPAA 905 Query: 650 FERWYKRYLKR 660 + + + Sbjct: 906 LGAFLREARTQ 916 >UniRef50_A1TI51 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=15 Tax=cellular organisms RepID=A1TI51_ACIAC Length = 1499 Score = 803 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 187/562 (33%), Positives = 295/562 (52%), Gaps = 18/562 (3%) Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRRE 165 + ++ +A AI++ D I +N E G + GQS+ +L ++ Sbjct: 936 SDAHIRRQASLLDKARDAIIVRDLDHRITFWNEGAERLYGWTREEATGQSIAELLY--QD 993 Query: 166 AAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITE 225 R R G + E+ G+RL + + G ++ TDI + Sbjct: 994 TQEFLRATRATQEQGE-WAGEIVQFHRDGRRLDVEGRWTLIQGEQGQPDAILAIDTDIGQ 1052 Query: 226 ERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDA 283 + + ++ LA DS+TGLPNR + D + HA+ A + ++++DLDNFK +ND Sbjct: 1053 RKATEREIQRLAFYDSLTGLPNRMLLMDRMRHALATAQRRRQGGALLFIDLDNFKTLNDT 1112 Query: 284 YGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS------ALEAMASRI 337 GH GD LL+ V+ + +C+ +AR GGDEF+V+ S + + +I Sbjct: 1113 LGHDQGDVLLQQVAARLNTCVRSVDTVARLGGDEFVVMIEGLSTHPGELAMSARTVGEKI 1172 Query: 338 LTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDST--AIIRHADTAMYTAKEGGRGQFCVF 395 L L P+ + ++ S+G+A G ST +++ AD AMY AK GR F Sbjct: 1173 LAVLATPYVLQGYHYRSTPSIGVAPF-GDGRTSTVGELLKQADLAMYQAKTAGRNTLRFF 1231 Query: 396 TPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPP 455 P M V L+ +LR AL +Q ++HYQP+I RG V +EALVRW P+RG++ P Sbjct: 1232 DPGMQAVVTARAELENDLRTALAREQFMLHYQPQIDRRGSVTGVEALVRWPHPQRGMVSP 1291 Query: 456 LDFISYAEESGLIVPLGRWVILDVVRQVAKWRD---KGINLRVAVNISARQLADQTIFTA 512 +FI AEE+GL++PLGRWV+ Q+A+W+ +G +L +AVN+S+RQ + Sbjct: 1292 GEFIPLAEETGLVLPLGRWVLHTACAQLARWQHVPGRG-HLSMAVNVSSRQFHHEAFVED 1350 Query: 513 LKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQL 572 + + + + +ELTES +E+ E ++ + G LDDFGTGYSSLS L Sbjct: 1351 VVRAITATGAPASRLKLELTESLFVEDMETTIATMAALRSHGVGFSLDDFGTGYSSLSYL 1410 Query: 573 ARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNG 632 R P+D +K+DQ FVRD+ P ++V I+A++++L L VIAEGVE+A++ L + G Sbjct: 1411 KRMPLDQLKIDQSFVRDLLADPNDAAIVDTIIALSRSLGLDVIAEGVETAEQRTRLEQAG 1470 Query: 633 INERQGFLFAKPMPAVAFERWY 654 QG+ F++P+P A E + Sbjct: 1471 CRAYQGYFFSRPLPETALEDFL 1492 Score = 59.1 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 69/226 (30%), Gaps = 8/226 (3%) Query: 13 FLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDE 72 + + + +L VL ++ T + + I +++ L V+ Sbjct: 375 PMLGYPLWQQLEAEQTVLHSDGSQQHALFATDEGQHGLLSFIAAPLRAGDTVLGMLKVNA 434 Query: 73 SDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDS-RG 131 + + + A + A + A LS + + + + Sbjct: 435 DPVFTFSQRQVAYVQILAESLGAVLQLRSYAAQLSASELQYRSLFDAHPQPMWVYERGSL 494 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 I NR + G +E +++ + +L+ E SR+ + Sbjct: 495 RILAVNRAMVRHYGYEEAELLRMTTAQLWP---EQERSRQEIEARALPPGVRRDAVHRRH 551 Query: 192 --CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 G + + + +G+ ++ TD+T+ R + L Sbjct: 552 CKKDGTPIDMEVYAGDTTFNGRAARQVLA--TDVTQRMRMERELAR 595 Score = 58.7 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 18/174 (10%), Positives = 44/174 (25%), Gaps = 5/174 (2%) Query: 66 MSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIV 125 +L + V + + + E + AI Sbjct: 137 RALEESHREALVAIASQAMALLELRRQRRDVARRAQERALSEERFHLVARA---TADAIW 193 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVI--GQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 + + +N E G+ H + S + + + Sbjct: 194 DWNLTDDSMWWNEGMEVLFGVPLHTLPHDSTSWTQRLHPEDSDRVLESIHAAIEGDALHW 253 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 E G ++ FV + ++ TDI+ ++++ + + A Sbjct: 254 MDEYRFRRQDGTYAWIRDRGFVIRDAQGQGQRMVGGMTDISAQKQSALQAQRDA 307 >UniRef50_A8GYS2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Shewanella RepID=A8GYS2_SHEPA Length = 1072 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 197/599 (32%), Positives = 311/599 (51%), Gaps = 7/599 (1%) Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 ++ + D S+ L K E A A + + L A V + Sbjct: 459 IVDDVEKLAKDPSLELALEVKGKDELTQIALAVNQMVSERMKSRRALHQASAVFRHSAEG 518 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 I++ D+ +I+ N TG DV G+S L S + S N++ Sbjct: 519 IIVTDANNHIELVNPAFTKITGYTLDDVKGKSPSIL-SSAHHQEDFYQQLWRSLSSKNSW 577 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSIT 243 E E+W G+ + S I I DI+ ++ ++ + N DS+T Sbjct: 578 EGEIWNKRKGGKIYPEYLKITAVKNSKNKTIQHIGLFLDISNNKQYEQDIWYKTNFDSLT 637 Query: 244 GLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAIL 301 LPNR+ + AI+ A N ++V + ++DLD FK +N+ +GH G+++L+ + + Sbjct: 638 KLPNRHLFSSRLQQAIDSAHNTNSQVAIFFIDLDRFKFINELHGHAAGNKVLKQSATRLE 697 Query: 302 SCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 + L D +AR GGDEF+V++ T E +A ++ L P+ E S S GIA Sbjct: 698 AVLGPDDSIARIGGDEFVVISPQTGNVGAEQLAQKLSDTLAKPYLFDNKETIISSSFGIA 757 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 PE G D ++ +++TAMY AK GR + F+PEMN + E + L+ LRKA++ + Sbjct: 758 FYPEDGQDIEMLLHNSETAMYQAKRDGRAHYQYFSPEMNVEMLERMHLEQRLRKAVKQSE 817 Query: 422 LVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 + YQP I GEV S+EALVRWQ P+ G+I P FI AEE+GLI PLG W++ + Sbjct: 818 FYLEYQPVIDMHSGEVTSVEALVRWQDPDYGVISPQAFIPIAEEAGLIEPLGEWILQQAL 877 Query: 481 RQVAKWRDKGINLRVAVNISARQL---ADQTIFTALKQVLQELNFEYCPIDVELTESCLI 537 +A+W +G+ L++A+N+SARQ D + F LKQ L + + + +E+TES LI Sbjct: 878 SDLAQWHAQGLMLKMAINVSARQCIHSRDISFFDILKQTLAKHDIAAENLHIEITESMLI 937 Query: 538 ENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQ 597 E+ L ++ QLG ++LDDFGTGYS+LS L + PI IK+D+ F+ + P Sbjct: 938 EDKPQCLQTLESIKQLGVDIYLDDFGTGYSALSYLTQCPISVIKIDKSFIDNALDNPSDA 997 Query: 598 SLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 L++AIV +AQ+L + ++AEGVE+ ++ FL G + QG+L +KP+ + + Sbjct: 998 KLIKAIVMMAQSLEMPLVAEGVETVEQWHFLRNLGCDYAQGYLMSKPLAKAELVEFLRH 1056 >UniRef50_C5T198 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T198_ACIDE Length = 948 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 189/644 (29%), Positives = 307/644 (47%), Gaps = 14/644 (2%) Query: 19 PYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVH 78 P + D + + RT AE + + +T + Sbjct: 308 PEQIAGRTIDEVL--PPDAAGVVRTALTQAEATGHTQ-----GQQFALEMTDGRHWFELS 360 Query: 79 LVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNR 138 + + D +DL L V + +I+I + RG I+ N Sbjct: 361 VARIQDPGFADPRFVVLSRDVTQRMQDL-DALRKLRHAVEQTPHSIIITNLRGQIEYVNP 419 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF 198 TG +V+G++ L + A + SG A++ EL G+ ++ Sbjct: 420 SFTTVTGYGSDEVMGRNPRMLGAGKTSAEVVAQMWERLL-SGLAWKGELLNRHKTGREVW 478 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 + + I DI+E + +ER+R LAN D++TGLPNR A Sbjct: 479 EYVSISPMRDEQGAITHYISVQEDISERKSNEERIRHLANFDALTGLPNRAMFSARFSQA 538 Query: 259 INHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGD 316 + + + + ++YLDLD FK VND+ G+ GD +L DV+ + + L + ++R GGD Sbjct: 539 LGLSQRSEGSLALLYLDLDRFKNVNDSLGYAVGDGVLIDVAHRLKALLRDEDTVSRYGGD 598 Query: 317 EFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRH 376 EFLV+ T+ A R+ L ++ + + SVGIA+ P GSD A+ H Sbjct: 599 EFLVVLPLTTAQGAVHFAERLHGELSKACQVESHALLVTFSVGIAMYPGDGSDMEALTHH 658 Query: 377 ADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGE 435 A+ AMY AKE GR +C F+ +M + L ++ LR A+ ++ +H+QP+ Sbjct: 659 AEVAMYKAKEMGRDHYCFFSADMQAQSSRLLRIENGLRTAIAQGEMSLHFQPQWRVHDRR 718 Query: 436 VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLR 494 + +EAL+RW PE G++ P +FI AE SG I+ +G WV+ + + +WRD G +L Sbjct: 719 MVGVEALLRWTHPELGVVGPAEFIPVAESSGQIIDIGLWVLDTALACLRRWRDAGHTDLT 778 Query: 495 VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLG 554 VAVN+S Q + +++ LQ +++ELTES + E A++ ++ + LG Sbjct: 779 VAVNLSLAQFRHPDLVEVVQKALQRAGVPAEVLELELTESIAMHEPEKAIACVRALADLG 838 Query: 555 AQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQV 614 Q+ LDDFGTGYSS S L R + +K+DQ FVR++ S+VRAIV ++++L L Sbjct: 839 VQLSLDDFGTGYSSFSYLQRLRVHRLKIDQSFVRNLDT-ARGMSIVRAIVEMSRSLGLAT 897 Query: 615 IAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 IAEGVE+ + L + QG+ ++P+P A E ++ Sbjct: 898 IAEGVETPHQLEALAGLSCDMVQGYHLSRPLPVPALEALLEQRA 941 Score = 48.3 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 44/136 (32%), Gaps = 4/136 (2%) Query: 104 RDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSR 163 R L+ + V+ + + G R + T + G+++ ++ Sbjct: 264 RALARSEKSLKAVLDAVPDLMFEMTRSGRYLRVHTRVPGLTERVPEQIAGRTIDEVLPP- 322 Query: 164 REAAASRRNNRVFFRSGNAYEV-ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 +AA R + + + + G+ + + G + + D Sbjct: 323 -DAAGVVRTALTQAEATGHTQGQQFALEMTDGRH-WFELSVARIQDPGFADPRFVVLSRD 380 Query: 223 ITEERRAQERLRILAN 238 +T+ + + LR L + Sbjct: 381 VTQRMQDLDALRKLRH 396 >UniRef50_A7IP89 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IP89_XANP2 Length = 758 Score = 802 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 188/654 (28%), Positives = 316/654 (48%), Gaps = 19/654 (2%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEPDRTLQL------SAEQAARIREMTVITSSLMMS 67 + + + D+L + + RT + + AA +++ S + + Sbjct: 91 IHVGRSLYLSPRARDILGIAPKAPVDIRRTFRQMLRGADRRKVAAVRKDLVRGGSDVDLD 150 Query: 68 LTVDE-----SDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 + + D+ + + D + L A V + AH Sbjct: 151 IRISRPDGASRDVRWRGLATRDGDGAVTRVVGMITDV-TAQKQSERHLRLAAAVFASAHD 209 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 +V+ D + N TG E +++G+S+ + R + R S + Sbjct: 210 GLVVTDLNAVVSAVNPAFSQITGYCEAEILGRSMRTMHSGRHD-REFYRGMWGALTSTGS 268 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 + E+W G+ + + + DIT + ++ L +A+ D + Sbjct: 269 WHGEIWNRRKNGEIFLQQLSIRTVFDEKGKPQNYVGAFQDITRIKHSEFELDRIAHYDPL 328 Query: 243 TGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 T LPNR + L+D A++ A V++LD+D FK VND+ GH+ GD +L+ + I + Sbjct: 329 TDLPNRTLLASLLDLAVSRA-GKTCAVLFLDIDRFKTVNDSLGHIAGDAVLKAAADRIRA 387 Query: 303 CLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 L+ D L G DEF+V+ ASR++ L PF I E+Y SVGI+ Sbjct: 388 ALDADATLGHYGADEFVVILEEIEGPQDAALAASRLIDELARPFTINGGEIYLGASVGIS 447 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 L P D+ +++HA+TA+ AK GRG + +T + + + ++ +LR+ L ++ Sbjct: 448 LHPLDADDAAQLLQHANTALAEAKAQGRGIYSFYTQALTRSARVRMEMEADLRRGLVREE 507 Query: 422 LVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 +++QP + G + EALVRWQSP GL+ P FI AEE+GLI PLG WV+ + Sbjct: 508 FRLNFQPVVDLANGRIAGAEALVRWQSPVHGLVLPNRFIPLAEETGLIEPLGDWVLEEAC 567 Query: 481 RQVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 +Q+AKW G +L +AVN+S RQ T+ +++VL+ ++VE+TE+ L Sbjct: 568 QQMAKWTAAGADLDFIAVNLSPRQFQRGTLCERIEEVLRRTGLPAARLEVEITENVLFGA 627 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 A ++ G ++ LDDFGTGYSSL+ L RFPI +K+D+ FV D+ + + Sbjct: 628 V-AAERKLRDMRDSGVRIALDDFGTGYSSLAYLKRFPISKLKIDRSFVHDLPR-AADAEI 685 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 AI+++A+AL L V+AEG+E+ ++ AFL + G QG+LF +P+ + F R Sbjct: 686 ATAIISIARALGLDVVAEGIEAPEQCAFLKERGCGFGQGYLFGRPVTSERFLRL 739 >UniRef50_D2XIQ4 Putative signal transduction protein n=1 Tax=uncultured bacterium 9F08 RepID=D2XIQ4_9BACT Length = 965 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 186/578 (32%), Positives = 299/578 (51%), Gaps = 13/578 (2%) Query: 90 AGNASAWHDTPAVARDLSHGLSFAEQ----VVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 G H + + H Q ++ A AI+ LD+RG + N G Sbjct: 248 IGRERQLHQMASETQQALHQARQLGQEQQMILDAAADAIIGLDNRGRVTFSNPAATALFG 307 Query: 146 LKEHDVIGQSVFKLFM----SRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFR 201 ++ G+ + L R+ G + + G L + Sbjct: 308 YSAEELQGEDLHALIHLCKEGEAHPREECGLWRLLRFGGQYHSGHETLRHKDGTPLPVEM 367 Query: 202 NKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINH 261 N I + + DI+E ++ L A+ D +TGL NR ++ + Sbjct: 368 NGSAIDDEKGVVIGAVLTFRDISERLSYEQELERRAHYDELTGLANRVLLKARLQQTTAQ 427 Query: 262 ADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFL 319 A + V V++LDLD+FK VND GH GD+LL ++ + + + +AR GGDEF+ Sbjct: 428 AHRHGKSVAVLFLDLDHFKIVNDGLGHDCGDRLLVAIAQRLQTVVREADTVARHGGDEFV 487 Query: 320 VLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHAD 378 ++ S + R+L R+ P I E+YT+ SVG++L P G+D ++R+AD Sbjct: 488 IVLSEPDNGEDAAEIGRRLLQRIAEPVWIDEHELYTTASVGVSLFPRDGTDVDTLLRNAD 547 Query: 379 TAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVR 437 AMY AK GR ++ EMN + + L + + LR+A+E ++L +HYQP+ + G + Sbjct: 548 AAMYRAKHLGRNNLQFYSEEMNLSLSKRLRMLSQLRQAVERNELCLHYQPQASLPGGRLL 607 Query: 438 SLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVA 496 +EALVRWQ PE G++ P +FI AEESGLI P+G WV+ + RQ W G LR++ Sbjct: 608 GVEALVRWQHPELGMVSPAEFIPLAEESGLIEPIGEWVLREACRQGVAWDRAGFMPLRIS 667 Query: 497 VNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQ 556 VN+SARQ + + ++ VL++ +++ELTE+ LI N + ++ + LG + Sbjct: 668 VNLSARQFDNPKLDDTIRDVLEQTGLAPERLELELTETALIANPQQSVQRLSAIRDLGVR 727 Query: 557 VHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIA 616 + LDDFGTGYSSL+ L R+ D IK+D+ FV D + P + ++VR ++A+A+ L + IA Sbjct: 728 LALDDFGTGYSSLAYLQRYTFDLIKIDRSFVADAIRNPGNAAIVRTVIAMARLLGSETIA 787 Query: 617 EGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 EG E+A+ FL +NG + QG+ ++P+PA E+ + Sbjct: 788 EGAETAETITFLGRNGCDAVQGYYISRPLPAGEIEQLF 825 >UniRef50_A8FY98 Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FY98_SHESH Length = 951 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 186/655 (28%), Positives = 304/655 (46%), Gaps = 16/655 (2%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLM 65 E + ++P + + + S + + ++ + + T S Sbjct: 289 EWNKSAEKIFGYSPDEVIGHALLEILVSEEIRDDINNIGKI-------LFKGNKCTRSSN 341 Query: 66 MSLTVDESDLSVHLVGRKINKREWAGN-ASAWHDTPAVARDLSHGLSFAEQVVSEAHSAI 124 ++T D + I ++ ++ L A V + + I Sbjct: 342 ENITKDGRTIICEWYSTPIVGVNGEVIGVTSLILDITESKQAELKLKHAASVFTHTNQGI 401 Query: 125 VILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYE 184 I D+ G I N TG +VIGQ+ L R + R ++ + Sbjct: 402 TITDTSGVIIEVNDAFSAITGYARDEVIGQNPRVLQSGRH-SPEFYREMWATLQADGHWT 460 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E+W + + + DIT + QE+L +A+ D++T Sbjct: 461 GEIWNKRKNDEIYPEMLTISAVLDATGKVQNYVALFNDITAIKEHQEQLERIAHYDTLTN 520 Query: 245 LPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR + D + ++ K + VV+LDLD FK VNDAYGH GD+LL +S + Sbjct: 521 LPNRTLLADRLTQSMVQVRRRKSSLAVVFLDLDKFKDVNDAYGHDVGDKLLIVISRRLKE 580 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 L LAR GGDEF+ + + + E + R+L + I + S S+G+A Sbjct: 581 ALRDIDTLARIGGDEFVAVLMDIEKGEDCEPVLERLLEAASGSVTVEGIMLKVSASMGVA 640 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 + P+ G D+ ++RHAD AMY AK G+ + +F N + ++RKAL+ + Sbjct: 641 IYPQDGIDADQLLRHADQAMYVAKHEGKNCYHLFDTAQNIAMQIRHDDLQSMRKALDQSE 700 Query: 422 LVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI-VPLGRWVILDV 479 V++YQPK+ G + EAL+RW SPERGL+ P +F+ A E+ +I + +G WVI Sbjct: 701 FVLYYQPKVNMRTGAIIGAEALIRWLSPERGLVGPNEFLP-AIENHVISIEVGEWVIDTA 759 Query: 480 VRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQEL-NFEYCPIDVELTESCLIE 538 + Q+A W++ G+++ V+VN+SA QL T L +L+ +++E+ E+ LI+ Sbjct: 760 LGQIAAWQELGLDIPVSVNVSALQLQHDGFVTCLAALLEAHPEVAPSSLEIEVLETSLID 819 Query: 539 NDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQS 598 + + + +LG LDDFGTGYSSL+ L R P IK+DQ FV D+ P + Sbjct: 820 DVMQVSATMLACIELGVTFALDDFGTGYSSLTYLRRLPASLIKIDQTFVLDMLTTPDDLA 879 Query: 599 LVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 +V +V++A++ +VIAEGVE+ L + G QG+ A+PM A W Sbjct: 880 IVEGVVSLAKSFKHKVIAEGVETIAHGTTLLQTGCELAQGYGIARPMMAKDIPEW 934 Score = 98.8 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 71/236 (30%), Gaps = 2/236 (0%) Query: 2 KTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVIT 61 + + + + + +++ ++ S E R A + Sbjct: 158 RNIVSINQGFELMMGYGIDELEGKTASIIYESDEEYERQGRIHFNLAAKEKVTPYEANYR 217 Query: 62 SSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH 121 + + S + + + +I + G D L + V Sbjct: 218 HKDGSIIVGETSRIVIRTLDDQI--LGYVGFIRDVTDRKKATTALQESTAMLSHHVQNTP 275 Query: 122 SAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN 181 + DS N +N+ E G +VIG ++ ++ +S ++ F+ Sbjct: 276 LGCISWDSNLNCIEWNKSAEKIFGYSPDEVIGHALLEILVSEEIRDDINNIGKILFKGNK 335 Query: 182 AYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILA 237 T G+ + G I + DITE ++A+ +L+ A Sbjct: 336 CTRSSNENITKDGRTIICEWYSTPIVGVNGEVIGVTSLILDITESKQAELKLKHAA 391 Score = 98.4 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 59/180 (32%), Gaps = 4/180 (2%) Query: 64 LMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSA 123 + + + L + L+ ++ R+ A A + + + + A Sbjct: 91 IPKLINIFAGVLVILLLIKRWVPRDIHERKEALLALHAAKSASVNNENLFNSIFNGVTDA 150 Query: 124 IVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAY 183 + DS NI N+ E G ++ G++ ++ S E R + Sbjct: 151 CIFADSNRNIVSINQGFELMMGYGIDELEGKTASIIYESDEEYERQGRIHFNLAAKEKVT 210 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRA----QERLRILANT 239 E G + ++ V + + D+T+ ++A QE +L++ Sbjct: 211 PYEANYRHKDGSIIVGETSRIVIRTLDDQILGYVGFIRDVTDRKKATTALQESTAMLSHH 270 >UniRef50_C0ZBT5 Probable signaling protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZBT5_BREBN Length = 815 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 195/664 (29%), Positives = 336/664 (50%), Gaps = 27/664 (4%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQA--ARIREMTVI 60 + + + + + + V+ +L E R+ + V Sbjct: 157 VITYVNDKFCEISRYEVDELVGNTHRVIN----SRYHSKSFFKLMWETIKQGRVWKGEVK 212 Query: 61 TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSF-AEQVVSE 119 + + + + V + + ++ + D L+ L + V Sbjct: 213 NRAKDGTEYWMNTTI-VPFLDDRGVPYQYVSIRTDITDRIEAETALAEALQNDFRRTVQN 271 Query: 120 AHSAIV--ILDSRGNIQR--FNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 + + + D RGNI + GL ++ ++ +++F R Sbjct: 272 LQNCVFKIVTDQRGNITYTLCEGKIAEELGLTSERMLRKTSYEIFPYEVAEQMESYFRRA 331 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 F +G + EL + G + + ++ S DITE ++A+E +R Sbjct: 332 F--AGESVTFELKL---SGNDY--YITLSPI-EENGEIVEMVGSMIDITERKKAEETIRY 383 Query: 236 LANTDSITGLPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLL 293 +A+ DS+T LPNR + + A+ A K+GV+++DLD FK +ND GH GD LL Sbjct: 384 MAHYDSLTNLPNRTLFHEKLAEAMLKAKQKDEKIGVMFIDLDRFKNINDTLGHSIGDVLL 443 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVY 353 + V+ ++ CL + ++R GGDEF + + + +A RI+T + + IE++ Sbjct: 444 QAVANRLICCLRKEDSVSRLGGDEFAIFLTGVTHREAGEIAQRIITSMSESITLDHIEIF 503 Query: 354 TSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNL 413 + S+GI++ P+ G D A+++HAD AMY AKE G+ + F+ E++Q + + L L+ L Sbjct: 504 ITPSIGISMYPDDGDDIEALLKHADAAMYLAKEQGKNNYQFFSEELHQVLAKKLQLEREL 563 Query: 414 RKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLG 472 RKAL+ Q +HYQPKI G++ +EAL+RW P+ GLIPP+ FI AEE+GLIVPLG Sbjct: 564 RKALDEKQFTLHYQPKIHLQTGQIIGMEALIRWDHPDLGLIPPIQFIPIAEETGLIVPLG 623 Query: 473 RWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVEL 531 WV+ +Q W++ G L VAVNIS RQ + + +L+E +++E+ Sbjct: 624 EWVMRTACQQTKAWQEAGFTQLAVAVNISLRQFMQNNLIEMITSILEETGLAPQYLELEI 683 Query: 532 TESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIH 591 TES + N + + ++ + LG + +DDFGTGYSSLS L++FPID +K+DQ F+R++ Sbjct: 684 TESMAL-NVDYTIRILNRLKALGVSISIDDFGTGYSSLSYLSQFPIDRLKIDQSFLRNL- 741 Query: 592 KQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFE 651 P +Q++++ I+ +A + + VIAEGVE+ + FL + NE QG+ ++KP+P + Sbjct: 742 -NPQNQAIIKTIIHMAHNMKIAVIAEGVETHEHVDFLKEQLCNEVQGYFYSKPLPTKEID 800 Query: 652 RWYK 655 + + Sbjct: 801 SFLQ 804 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 27/239 (11%), Positives = 73/239 (30%), Gaps = 18/239 (7%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 + + L N + +S +++ P + + +R + + Sbjct: 29 IITYVNHNFCQLSKFNREELIGKSHNIVDSG----FHPRNYFKSLWDTISRGK----VWK 80 Query: 63 SLMMSLTVDESDLSVHLVGRKI-NKREWAGNASAWHDTPAVARDLSHGLSFAEQ------ 115 M + D ++ + + N + A + + L+ + Sbjct: 81 GEMKNRGKDGTEYWLSMTLVPFMNDSGFLYQYVAIGTDITKRKLMEESLAKTMKDLHDIK 140 Query: 116 -VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNR 174 + E+ + I D +G I N + + + +++G + + R + + + Sbjct: 141 NALDESS-IVAITDDKGVITYVNDKFCEISRYEVDELVGNTHRVINS-RYHSKSFFKLMW 198 Query: 175 VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 + G ++ E+ G ++ + TDIT+ A+ L Sbjct: 199 ETIKQGRVWKGEVKNRAKDGTEYWMNTTIVPFLDDRGVPYQYVSIRTDITDRIEAETAL 257 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 2/123 (1%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 +A + E+ I I D +G I N + ++IG+S + S Sbjct: 9 KYALSALEESSV-ISITDEKGIITYVNHNFCQLSKFNREELIGKS-HNIVDSGFHPRNYF 66 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 ++ G ++ E+ G +L + GTDIT+ + + Sbjct: 67 KSLWDTISRGKVWKGEMKNRGKDGTEYWLSMTLVPFMNDSGFLYQYVAIGTDITKRKLME 126 Query: 231 ERL 233 E L Sbjct: 127 ESL 129 >UniRef50_Q74FR9 Sensory box/GGDEF family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FR9_GEOSL Length = 682 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 195/609 (32%), Positives = 319/609 (52%), Gaps = 6/609 (0%) Query: 56 EMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQ 115 +T +++ L V + R +A ASA + + L F + Sbjct: 62 ALTDAAGNVLGPLAVLSRRPLGDSELAETMLRIFAARASAELERTKAEQARREQLHFLQV 121 Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 ++ I D+ N E + G ++IG++VF + R A +R Sbjct: 122 LIDSIPHPIFYKDADRRYIGCNAALESFIGRTREEIIGKTVFDIGAEGR-ARICDAVDRK 180 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRI 235 +G + + G + +K V + + ++ + DITE +RA+E ++ Sbjct: 181 LLANGGVESYDSTMIHTDGSIRDIIFSKTVFGNTDGSIGGIVGTILDITERKRAEEAIQQ 240 Query: 236 LANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLL 293 LA D++TGLPNR ++D + ++ A GV++LD+D FK VND+ GH GD LL Sbjct: 241 LAYFDALTGLPNRTLLRDRVSQLLSQARREGGGFGVLHLDVDRFKGVNDSLGHACGDVLL 300 Query: 294 RDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS-ALEAMASRILTRLRLPFRIGLIEV 352 V+ I S + +AR G DEF+V+ + A+ +I+ L P I ++ Sbjct: 301 STVAGRIASSIRESDTVARLGSDEFVVILPGVGHEEDVVAVVRKIVEELNRPIVIQGNDI 360 Query: 353 YTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTN 412 + + S+GIA+ P GS + ++++AD AM+ AKE G + ++ E+N R E L L+T+ Sbjct: 361 FCTASIGIAIYPTDGSSADILLKNADMAMHKAKEFGGDGYQFYSSELNHRAMERLTLETS 420 Query: 413 LRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPL 471 LR+ALE + ++HYQP + G + +EAL+RW SPE G++ P FI AEE+GLIVP+ Sbjct: 421 LRRALERREFLLHYQPLLGIGSGRIVGVEALLRWDSPELGMVSPARFIPLAEETGLIVPI 480 Query: 472 GRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVE 530 G WV+ Q+ + G L V+VN+SARQ + VL + + +++E Sbjct: 481 GEWVLRSACEQLRALHELGYTELCVSVNVSARQFRHDGFCAMVAAVLAAVGLDPRYLELE 540 Query: 531 LTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI 590 LTES ++E E A ++++ Q+G + +DDFGTGYSSLS L FPID +K+D+ FV+++ Sbjct: 541 LTESVIMERSETAKGILRKLKQMGVSLAIDDFGTGYSSLSYLKHFPIDRLKIDRTFVKEV 600 Query: 591 HKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 + ++ AIVA+A LNL V+AEGVE+A++ AFL + QG+ A+P+P Sbjct: 601 TVDQDNAAIAEAIVALAHVLNLDVVAEGVETAEQLAFLAALRCDVVQGYHIARPLPPRNL 660 Query: 651 ERWYKRYLK 659 + + + Sbjct: 661 LEFLEARQE 669 >UniRef50_Q1H3Y9 Diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3Y9_METFK Length = 858 Score = 800 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 181/570 (31%), Positives = 314/570 (55%), Gaps = 6/570 (1%) Query: 94 SAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 W T R + A V + + I+I + + N TG +++G Sbjct: 288 YVWLRTIQQLRRRDARMRLATSVFASSSEGILIANPNDEVIGINPAVTALTGYSVQELLG 347 Query: 154 QSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE 213 + V L + A SRR ++ E I +G + +G Sbjct: 348 RPVSFL-APEQTVAESRRQASFSISEKGVWQGEALIKHKQGYTFPVALTITTVTGEDGRV 406 Query: 214 IFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLD 273 I + +DI+E + + R+ LA+TD++TGLPNR ++ ++ + + +GV+ LD Sbjct: 407 ECYINTFSDISERKANEARIHDLAHTDTLTGLPNRMSLYSGLEERLANVQ--PIGVMILD 464 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEA 332 LDNFK +ND GH GDQLL +V+ ++ C+ ++AR GGDEF+++ + + Sbjct: 465 LDNFKIINDTLGHHVGDQLLVEVARRLVCCVGEQGMVARLGGDEFVIVLDCPQATQIVGR 524 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 +A +L RL P+ I E+++S S+GI +SP GSD +++++ DTAMY AK G+ F Sbjct: 525 VAKEVLQRLAQPYLIEGYELHSSSSIGIGVSPHDGSDPYSLLKNIDTAMYAAKSSGKNNF 584 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG 451 FT +M +++ E + ++ +LR+A+ ++ +HYQP++ G + +EALVRW PE G Sbjct: 585 KFFTEKMREQINERMQMENHLRQAILRNEFELHYQPQVDLGTGRIIGMEALVRWNHPEWG 644 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIF 510 ++ P FI AEE L++PLG WV+ + RQ+++W +G+ + ++VNISARQL + +F Sbjct: 645 MVHPEKFIRVAEECNLVIPLGEWVLCEACRQISQWSRQGLEAVCISVNISARQLKSRYLF 704 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 T + ++ + +++E+TES ++++ E + +++ G + +DDFGTGYSSLS Sbjct: 705 TLIDNLMMTHQIKPGMLELEITESAVMDDPEQTIPRMKELKNKGVALAIDDFGTGYSSLS 764 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L P+ +K+D+ FV+DI P ++ A +A+A+ L L ++AEGVE+ + +L Sbjct: 765 YLKLLPLTRLKIDRSFVKDIETDPNDAAICAATIALARTLGLGLVAEGVETEAQLEYLRA 824 Query: 631 NGINERQGFLFAKPMPAVAFERWYKRYLKR 660 G + QG+ F+KP+PA + R+ + Sbjct: 825 QGCDSAQGYYFSKPLPANNIMAFVSRHQQE 854 >UniRef50_B3PCE8 Sensory box/GGDEF family protein n=2 Tax=Gammaproteobacteria RepID=B3PCE8_CELJU Length = 772 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 193/581 (33%), Positives = 314/581 (54%), Gaps = 26/581 (4%) Query: 97 HDTPAVARDLSHGLSFAE-----QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 H+ + L+ +A ++ + + I + D GN+ + + + E Sbjct: 177 HEEQSERHRLAEQALWASETYLNAILHYSPALISVKDLDGNVVLASDHFKHMADIDESGF 236 Query: 152 IGQSVFKLFMSRREAAASRRNNR----VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHS 207 +G++VF +F ++ + YEVEL + G KF Sbjct: 237 VGKNVFDVF-----PRDIAQSMWDIDIATKTNQQTYEVELDLMHKDGSLHTYLMVKFPLR 291 Query: 208 GSGKNEIFLICSGTDITEERRAQ-------ERLRILANTDSITGLPNRNAMQDLIDHAIN 260 G + GTDI+E + A+ RL +A D++T LPNR+ D I H + Sbjct: 292 GKEGKVFGVCTIGTDISERKLAENALREQQSRLNYMAFHDALTSLPNRSLFYDRIYHGLA 351 Query: 261 HADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEF 318 A + +V ++ LD+D FK VND+ GH GD LL+ +++ + + +AR GGDEF Sbjct: 352 RARRSNSRVALMLLDIDRFKIVNDSLGHDAGDILLKAIAMRLTEGVRDMDTVARLGGDEF 411 Query: 319 LVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHA 377 +V+ + +A+++L L P I + + S+G+++ PE G+D+ ++++A Sbjct: 412 VVVLEGIHDVDDVIFVANKLLATLSRPLDISGHSISATVSIGVSIFPEDGADTDELLKNA 471 Query: 378 DTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEV 436 D AMY AKE G+ +T MN YL L+ +LR+A+E +QL ++YQP+I G++ Sbjct: 472 DIAMYKAKEAGKNNCQFYTKGMNATAVNYLLLENDLRRAIEQNQLALYYQPQIDLKTGDM 531 Query: 437 RSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINL-RV 495 +EALVRWQ PERGL+ P FI AEE+GLIVP+G WV+ + +Q W D G N+ +V Sbjct: 532 TGVEALVRWQHPERGLVSPAHFIPLAEETGLIVPIGEWVLREACKQKKIWLDTGKNVGKV 591 Query: 496 AVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGA 555 AVN+S RQ + ++ +LQE E +++E+TESC +E+ ++ + Q +Q+G Sbjct: 592 AVNLSPRQFRQKNFPGKVEAILQETGLEAKYLELEITESCAMEHAGETINQLNQLNQMGT 651 Query: 556 QVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVI 615 + +DDFGTGYSSL+ L RFPI +K+D+ F+ DIH ++ + I+ +A + L+V+ Sbjct: 652 FLAIDDFGTGYSSLAYLQRFPIQKLKIDRSFIHDIHDDANDAAIAKTIIGLAHNMQLRVV 711 Query: 616 AEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 AEGVE+ + +L G ++ QGFL+AKPM A E + Sbjct: 712 AEGVETESQAEWLRAKGCDQVQGFLYAKPMTAKQLESHFHN 752 >UniRef50_B9MBY4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MBY4_DIAST Length = 790 Score = 799 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 201/671 (29%), Positives = 317/671 (47%), Gaps = 22/671 (3%) Query: 6 ESTTLYNFLGSHNPYWRLTESSDVLRFSTTE------TTEPDRTLQLSAEQAARIREMTV 59 + P+ L + + + R ++ Q R Sbjct: 126 WANERLREWLGVAPHEPLPQVDFRTLVRPHDSDWAQRQLQRLRAGEIDHYQGERWCRNQR 185 Query: 60 ITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARD---LSHGLSFAEQV 116 S L + TV H++ + + + A A V Sbjct: 186 DGSQLPVLCTVS------HVLALESEPDHLVCVLQSLREVHAARDAQALSEQRWRLAATV 239 Query: 117 VSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVF 176 V +V+ D+ G I N G E +++GQ+ R A Sbjct: 240 VDNTIEGVVVTDADGRILSVNPAVTRLMGYTEEELLGQNPRVFKSGRH-GPAFYEAMWDT 298 Query: 177 FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 R ++ E+W G+ + G+ +C TDI+EE+ +RL L Sbjct: 299 MRQTGHWQGEIWNRRKNGEVFPERMSLSAVRGADGAVTHYVCMFTDISEEKAQHQRLEFL 358 Query: 237 ANTDSITGLPNRNAMQDLIDHAINHAD--NNKVGVVYLDLDNFKKVNDAYGHLFGDQLLR 294 A+ D +TGLPNR + +D A+ A ++ ++ L+LD FK VND+YGH GD++LR Sbjct: 359 AHCDPLTGLPNRAWFGEQLDSAVRQAQDSGEQMALLLLNLDRFKDVNDSYGHAVGDEVLR 418 Query: 295 DVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEAMASRILTRLRLPFRI-GLIEV 352 ++ + L +L R GDE VLA + + A+A ++ P+ I+V Sbjct: 419 HITRQVEQSLRPGDLLGRLAGDEIAVLARHLRHADGAAAVARHLIAAASTPWCTPDGIQV 478 Query: 353 YTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTN 412 SVGI + P H + A+++ A +++Y AK GRG +C F + Q E L ++ Sbjct: 479 VVGVSVGICMFPAHARTTEALLQGAHSSVYGAKARGRGAYCFFDESLIQAARERLEIEAR 538 Query: 413 LRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPL 471 LR AL L ++YQP++ G + EALVRW P+ G+I P FI AE SG+I PL Sbjct: 539 LRVALAQGHLRLYYQPQVCIVTGRIMGAEALVRWLDPQEGMISPARFIPVAETSGVIGPL 598 Query: 472 GRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVE 530 G+WV+ Q +WR G+ +R+A+N+S RQ + + L+ F +++E Sbjct: 599 GQWVMRAACEQGQRWRADGLPEIRLAINLSPRQFQLTDVAACAAEALKASGFPARCLELE 658 Query: 531 LTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDI 590 LTES L E + +V+Q+ QLG ++ +DDFGTGYSSL+ L RFPID +K+DQ F+RDI Sbjct: 659 LTESVLAERPDEIRAVLQRLQQLGVRMAVDDFGTGYSSLAHLKRFPIDVLKIDQGFIRDI 718 Query: 591 HKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAF 650 + ++ AIVA+ +L L V+AEGVE+ ++ AFL + G + QG+L ++P+PA F Sbjct: 719 PRSADDMAISAAIVAMGHSLGLSVLAEGVETPQQLAFLRERGCDAYQGYLCSRPLPAEEF 778 Query: 651 ERWYKRYLKRA 661 R + + A Sbjct: 779 ARLLQAHNGMA 789 Score = 57.2 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 10/136 (7%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ-SVFKLFMSRREAAAS 169 EQV+ A + + L G + N ++ G+ H+ + Q L A Sbjct: 102 RRVEQVLRHAPAGMARLSMDGRLVWANERLREWLGVAPHEPLPQVDFRTLVRPHDSDWAQ 161 Query: 170 RRNNRVFFRSGNAYEVELWIPT-CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERR 228 R+ R+ + Y+ E W G +L + L+C + E Sbjct: 162 RQLQRLRAGEIDHYQGERWCRNQRDGSQLPVLCTVSHVLALESEPDHLVCVLQSLREVHA 221 Query: 229 A-------QERLRILA 237 A ++R LA Sbjct: 222 ARDAQALSEQR-WRLA 236 >UniRef50_A9BRL9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=cellular organisms RepID=A9BRL9_DELAS Length = 881 Score = 799 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 191/657 (29%), Positives = 302/657 (45%), Gaps = 14/657 (2%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 L + + L + + + ++ A E + + Sbjct: 218 VNRAAASLVGRQAEDIVGKDDFALFPFGIASAIRRKDQAVLRQEVATHEEQLTVEPGRTL 277 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 L V + + N + L+ A V +H I++ Sbjct: 278 DLLVTKGPVR--------NTAGHIAGLFGISRDITERKRFERELAQAAVVFDSSHQGIMV 329 Query: 127 LDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVE 186 +D I R N TG DVIG++ L S R + E Sbjct: 330 VDPGRRITRVNPAFTRITGYASEDVIGKTPRVL-SSGLHGPEFYRQIWACIERDGFWHGE 388 Query: 187 LWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLP 246 +W G+ + G+G I TDI+ + + L + + D +TGLP Sbjct: 389 IWNRRKTGEIFAEMLSISAAQGAGGEIEHYIGVFTDISHIKAHEAELERVTHYDLLTGLP 448 Query: 247 NRNAMQDLIDHAINH--ADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCL 304 NR + D ++ A+ + + V +LDLD FK++ND +G GD LL V+ + S L Sbjct: 449 NRRLLIDRLNQAMLRTAREGRSLAVCFLDLDGFKEINDLHGAAAGDALLVGVAAHLKSVL 508 Query: 305 EHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALS 363 + LAR GGDEF++L S+ S + R+L P + + + S+G++L Sbjct: 509 RSEDTLARLGGDEFVLLLSHIGSAEHCATILDRVLEAASRPVPVQDRVLSVTASLGVSLY 568 Query: 364 PEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLV 423 P+ +D ++RHAD AM AK+ GR ++ +F PE +++ LR+ALE + + Sbjct: 569 PDDQADPDLLLRHADQAMCVAKQAGRNRYQLFDPENDRKAHARRLQLGWLRQALEKGEFL 628 Query: 424 IHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQ 482 +HYQPK+ G + EAL+RW P +GL P +F+ + S L PLG WVI + V Q Sbjct: 629 LHYQPKVELGGGRLVGAEALLRWHDPRQGLRAPGEFLPFVAGSDLERPLGDWVIGEAVAQ 688 Query: 483 VAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQEL-NFEYCPIDVELTESCLIENDE 541 A+W +G++L V++N+SA QL D + QVL + I++E+ ES I + E Sbjct: 689 AARWFGQGLDLCVSINVSANQLLDGGFHAKMAQVLARHPDLPPHLIELEILESAAIADME 748 Query: 542 LALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVR 601 A+ V+ Q QLG + LDDFGTGYSSL+ L + P+ ++K+DQ FVRD+ P +V Sbjct: 749 QAIQVMGQCRQLGIRFALDDFGTGYSSLTYLRKLPVQSLKIDQSFVRDMLADPDDLGIVE 808 Query: 602 AIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 ++ +A L+ +AEGVE+ K L G + QG+ A+PMPA W R+ Sbjct: 809 GVIQLASTFQLESVAEGVETPKHARRLRDMGCHVAQGYGIARPMPADQLPAWAARWQ 865 Score = 88.4 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 50/138 (36%), Gaps = 2/138 (1%) Query: 100 PAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 R + + V+S A+ + D RG NR G + D++G+ F L Sbjct: 182 QRSLRKANMQRQLLDSVISGTSDAVFVKDLRGRYLLVNRAAASLVGRQAEDIVGKDDFAL 241 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 F +A R++ + R A E G+ L L K + + L Sbjct: 242 FPFGIASAIRRKD-QAVLRQEVATHEEQLTVEP-GRTLDLLVTKGPVRNTAGHIAGLFGI 299 Query: 220 GTDITEERRAQERLRILA 237 DITE +R + L A Sbjct: 300 SRDITERKRFERELAQAA 317 >UniRef50_Q479L8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q479L8_DECAR Length = 582 Score = 799 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 179/578 (30%), Positives = 305/578 (52%), Gaps = 14/578 (2%) Query: 94 SAWHDTPAVARDLS-HGLSFAE--QVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 + A LS A + ++ AI++ D I N +G + Sbjct: 2 TDLVAATARQPATEGEVLSRAALLRAYEQSQDAILVTDRDNLIVAANGAFCQLSGYASDE 61 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 ++G+ L S A + + + +E E+W G+R + V + Sbjct: 62 LLGKDPRVL-ASDNSTAEHYASIWNALATKDFWEGEIWDKNKNGERYNRWLKIAVLRDAE 120 Query: 211 KNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN--NKVG 268 + + +++ + +RL LA D +T LPNR A + + A+ + ++ Sbjct: 121 GQIENHVANFSEMEASKEYADRLAYLAYHDPLTNLPNRLAFESQLAQALRGCERDNRQLA 180 Query: 269 VVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS 328 ++ +DLDNFK +ND GH GD+LL+ V+L + + ++AR GGDEF+++ Sbjct: 181 LMLIDLDNFKNINDTLGHHVGDELLQKVALRLRESVRSSDLVARIGGDEFVIVLPEIESP 240 Query: 329 -ALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEG 387 +A+++ + +RI +Y + S+GI+L P GSD+ ++R+ADTAMY AK+ Sbjct: 241 LTAARVANKVQQNMADSYRIADHALYATPSIGISLFPIDGSDANTLLRNADTAMYHAKDA 300 Query: 388 GRGQFCVFTPEMNQRVFEYLWLDTNLRKALE-----NDQLVIHYQPKI-TWRGEVRSLEA 441 GR +T MN+ E L ++ LR+A+ + + +H+QP++ T G+V LEA Sbjct: 301 GRNNHQFYTARMNEAAGERLHMENELRQAISAISPGDSEFSLHFQPQVQTATGQVFGLEA 360 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNIS 500 L+RW +P G + P+ FI+ AEE+GLI PLG WVI + R + + + GI ++R+A+NIS Sbjct: 361 LLRWNNPIFGQVSPMRFIAIAEETGLIQPLGDWVIWETCRLIRQMKQHGIEDIRIAINIS 420 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 A+QL + + ++ L + I++E+TES ++N E LS++ Q + +G + +D Sbjct: 421 AQQLRHENLLLLVRGALSCYDLRPEDIELEITESTAMQNPETTLSILDQLAAMGIVLAID 480 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFGTGYSSL+ L PI +KLD+ FV+DI ++ A +A+ +L L+++AEGVE Sbjct: 481 DFGTGYSSLAYLKHLPIQRLKLDRSFVKDIEIDANDAAICTATIALGHSLGLELVAEGVE 540 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 + + AFL G + QG+L++KPMP + K + Sbjct: 541 TEAQRAFLASLGCDTLQGYLYSKPMPFEETIAYLKAHQ 578 >UniRef50_C6XEG9 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Betaproteobacteria RepID=C6XEG9_METSD Length = 718 Score = 797 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 195/660 (29%), Positives = 309/660 (46%), Gaps = 22/660 (3%) Query: 14 LGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLS--AEQAARIREMTVITSSLMMSLTVD 71 L + P L E T P+ ++ + A RE I +M T+D Sbjct: 65 LTGYRPDELLHNGCTSF----EELTLPEDRARIRNTVDDALSRRERFEIEYRIM---TID 117 Query: 72 ESDLSVHLVGR-----KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVI 126 V+ G + G + L + + I Sbjct: 118 GQIRWVNERGTGIFNPQGQVEALEGFIQDITQRKLNEQALQEAERRYRNIFENSIEGIFQ 177 Query: 127 LDSRGNIQRFNRLCEDYTGL-KEHDVIGQSVFKLFMSRREAAASRRNNRVFFR-SGNAYE 184 G N G ++I QS+ + SR+ + Sbjct: 178 TSQDGQYINANPALARIYGYESPEELI-QSLNNIAQQLYVQPESRQAFLTLMQLEDRVVN 236 Query: 185 VELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITG 244 E I G +++ N ++ + DITE + + A D +TG Sbjct: 237 FESQIYRRDGSTIWISENARAVRNDAGKLLYFEGTVEDITERKSYNALIEYQATHDDLTG 296 Query: 245 LPNRNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 LPNR MQD + AI++AD +K+ VV++DLD FK +ND+ GH GDQLL ++ + S Sbjct: 297 LPNRTLMQDRLLQAISYADRTASKLAVVFVDLDKFKDINDSMGHFIGDQLLIAMARRLES 356 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQSAL-EAMASRILTRLRLPFRIGLIEVYTSCSVGIA 361 C+ +ARPGGDEF++L SN R+L P I + + S+GI+ Sbjct: 357 CIRDSDTVARPGGDEFVLLLSNIHGMDALSQTLQRVLALTSEPCSIEGKDFTVTSSIGIS 416 Query: 362 LSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQ 421 L P+ G S ++++ADTAMY AK+ G+ F +T E+N + E L ++ +R AL +++ Sbjct: 417 LYPDDGKTSETLLKNADTAMYKAKQEGKNNFQFYTRELNSILVERLEMEYQMRNALGHNE 476 Query: 422 LVIHYQPKITWRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV 480 +HYQPK+ R + +EAL+RW +P +GLI P FI AEES LI +G WV+ Sbjct: 477 FHLHYQPKLNLRTQRITGVEALIRWHNPRQGLISPNRFIPIAEESSLIEQIGSWVLEKAC 536 Query: 481 RQVAKW-RDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEN 539 + + G ++ V+VN+S RQ + + +VLQE + +++E+TE L + Sbjct: 537 MESIALSQLSGYDVPVSVNVSPRQFQQSNLVGNISRVLQETGLKPSLLELEITEGTLADT 596 Query: 540 DELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSL 599 + V+ LG ++ +DDFGTGYSSL L FPID +K+D+ FV + +Q++ Sbjct: 597 SPQFIKVLNDLKGLGIKLAIDDFGTGYSSLGYLKHFPIDNLKIDRSFVMGLESDTANQAI 656 Query: 600 VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLK 659 ++AIVA+ L + ++AEGVE+ ++ FL G +E QGFLF++P+P + K Sbjct: 657 LKAIVALGHNLGINLVAEGVETERQRDFLLSIGCDEMQGFLFSQPLPFDQAGKLLLAQDK 716 Score = 71.5 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 22/134 (16%), Positives = 47/134 (35%), Gaps = 6/134 (4%) Query: 106 LSHGLSFAEQVVSEAHSAIV---ILDSRGNIQRFNRLCEDYTGLKEHDVI--GQSVFKLF 160 L H + ++ + ++D+ + + C D TG + +++ G + F+ Sbjct: 26 LQHREHILDSLLKNM-EGMAYCCLVDAHWTMLFISDGCFDLTGYRPDELLHNGCTSFEEL 84 Query: 161 MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSG 220 + A R +E+E I T GQ ++ L Sbjct: 85 TLPEDRARIRNTVDDALSRRERFEIEYRIMTIDGQIRWVNERGTGIFNPQGQVEALEGFI 144 Query: 221 TDITEERRAQERLR 234 DIT+ + ++ L+ Sbjct: 145 QDITQRKLNEQALQ 158 >UniRef50_B6BGA2 Diguanylate cyclase/phosphodiesterase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGA2_9PROT Length = 802 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 182/587 (31%), Positives = 295/587 (50%), Gaps = 6/587 (1%) Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQ 134 + N + HD + + L A +V S+ +VI D+ +I Sbjct: 218 VEERCEHEFDNDGNVLRSIGTVHDITK-QKIAQNELMLASEVFSKMSDGVVITDANQSII 276 Query: 135 RFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKG 194 + N TG ++IG + F S A + + + E+ Sbjct: 277 KINESFTKITGYTNEELIGMTPKA-FSSGWHDEAFYKKMWDDIKQNGQWSGEIIDRKKSS 335 Query: 195 QRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDL 254 +R N I DI++++ ++ + LA DS+T LPNR ++ Sbjct: 336 ERYIAEMNIIALHNDDGILTNYISITNDISKKKEQEKLIHNLAYFDSLTDLPNRVLFEER 395 Query: 255 IDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLAR 312 + I + + K+ ++++D+DNFK VND GH GD L +VS I + + LAR Sbjct: 396 VVSRIPFSKRHDKKMALLFIDMDNFKNVNDTLGHFMGDMFLIEVSNIIKNSIREQDTLAR 455 Query: 313 PGGDEFLVLASNTSQ-SALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDST 371 GGDEF VL + + + +A +I+ P I E+YT S+GI+L P+ G Sbjct: 456 LGGDEFTVLLEDINSIMDIVPIAEKIIAAFNNPVLIESKELYTGISMGISLYPDDGKSYN 515 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 + + ADTAMY K G+ F F MN+++ E L+L+ +LR A+ N++L + YQPKI Sbjct: 516 ELFKAADTAMYQVKASGKNNFQFFKQSMNEKITERLFLENSLRNAIGNNELFLVYQPKIN 575 Query: 432 W-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 V +EAL+RW+ PE GLI P FIS +EE+G I +G WV + + G Sbjct: 576 LETKRVYGMEALIRWRHPEIGLIRPDKFISISEETGQIYNIGLWVAKQAIIDTKALHEAG 635 Query: 491 INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQF 550 L V++N+S++QL ++ + V+ E+ + +++E+TES ++ N + AL ++ + Sbjct: 636 HILTVSINVSSKQLENEKFIDDICCVVNEIGIDKSYVELEITESHIMSNIDKALKILNEL 695 Query: 551 SQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQAL 610 S G ++ +DDFGTGYSSLS L + P IK+D+ FV DI+K +S+V I+A+A+AL Sbjct: 696 SDKGFKLSIDDFGTGYSSLSYLKKLPAQTIKIDRSFVLDIYKDEDDRSIVATIIAMAKAL 755 Query: 611 NLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRY 657 VIAEG E+ + L N+ QG+ F+KP+ F+ + + Sbjct: 756 GKDVIAEGSETQEHIDTLKYLHCNKVQGYFFSKPIEIDEFKEFVDNF 802 Score = 49.9 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 70/230 (30%), Gaps = 10/230 (4%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 + Y L + + + L F E + + +I + Sbjct: 30 VNSTYAKLVGKEATAIIGK--NDLDFFPEEIAFKYQNDDSLVIKNKQIIDTVESILIDGK 87 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAH-SAIV 125 T+ ++ G + + +++ + L +GLS A+++ + H + Sbjct: 88 YKTIRTVKKPLYFNGEVSAVLGIFWDITEFNEEKEHFKKLEYGLSKAQELANIGHWELNL 147 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR--RNNRVFFRSGNAY 183 + + ++ GLK + G + + + Y Sbjct: 148 VTND----LFWSDEVYRIFGLKPQEF-GATYEAFLEHIHPDDVELVNSSYSDSITNRCGY 202 Query: 184 EVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERL 233 V I G+ F+ + N + I + DIT+++ AQ L Sbjct: 203 HVTHRIVRKNGEVGFVEERCEHEFDNDGNVLRSIGTVHDITKQKIAQNEL 252 Score = 45.3 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 12/126 (9%) Query: 116 VVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRV 175 +++ I + D N N G + +IG++ F E A +N+ Sbjct: 10 ILNSLEQNIFVKDLNSNYLFVNSTYAKLVGKEATAIIGKNDLDFFPE--EIAFKYQNDDS 67 Query: 176 FFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGS---GKNEIFLICSGTDIT---EERRA 229 + G ++ ++ DIT EE+ Sbjct: 68 LVIKNKQIIDTVESILIDG----KYKTIRTVKKPLYFNGEVSAVLGIFWDITEFNEEKEH 123 Query: 230 QERLRI 235 ++L Sbjct: 124 FKKLEY 129 >UniRef50_Q2SFK1 FOG: EAL domain n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFK1_HAHCH Length = 1092 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 202/651 (31%), Positives = 328/651 (50%), Gaps = 29/651 (4%) Query: 15 GSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESD 74 + P E +L + TE +R + S +R + + ++L Sbjct: 305 HATIPLLLGGEVIGLLNVARTE---GERWAEES------LRALQSLGHQFSVALGRARLF 355 Query: 75 LSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILD---SRG 131 S+ + + SA A L + V + +AI+I D Sbjct: 356 DSLESLVEQ--------RTSALKAEMAEKERAQEQLKLRNRAVDASVNAIIIADKSEPDN 407 Query: 132 NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPT 191 I N E +G DV G++ L + N + +S L Sbjct: 408 PIVYANPAFERISGYNLEDVTGRNFLFLL-GNETSQLGVANIKRALKSNTEGYALLKNYR 466 Query: 192 CKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAM 251 G + + + + + D+TE + Q +L D++TGLPNRN + Sbjct: 467 KDGTLFWSELKVAPVTDAKGDVTHFVAILNDVTESIQYQAQLEYKTKYDNLTGLPNRNLL 526 Query: 252 QDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQV 309 D I AI +A + DLDNFK +ND+ GH GDQLL +V+ ++ SCL Sbjct: 527 NDRIQQAIAYAARRNKGFALAVFDLDNFKYINDSMGHETGDQLLTEVAESLRSCLREGDT 586 Query: 310 LARPGGDEFLVLA--SNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHG 367 LAR GGDEF++L + L M +RI + P R+ E+ + S+G+ PE G Sbjct: 587 LARLGGDEFVILMHKEECDRP-LGLMLNRIQQLVSQPRRLKDKEILVTPSIGVCQFPEDG 645 Query: 368 SDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQ 427 D++ ++++ADTAMY AKE GR + C +T EMN+ + + + ++ +LR+ +EN +L ++YQ Sbjct: 646 EDASTLLKNADTAMYKAKERGRNRICSYTQEMNESIQKRVQMEQDLRRGIENGELELYYQ 705 Query: 428 PKIT-WRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKW 486 P++ G LEALVRW+ +R ++PPL+FI AEE+GLI + WV+ Q+ W Sbjct: 706 PQLDPHGGGAVGLEALVRWRKGDR-MVPPLEFIPIAEETGLITEVDAWVLRAACLQLKMW 764 Query: 487 RDKGINL-RVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALS 545 RD+ + V+VN+S RQ D +++VLQE N E + +E+TES ++ N E AL Sbjct: 765 RDQKQQMVPVSVNLSPRQFQDAYCVELVRKVLQESNIEPGCLKIEVTESMVMHNAEEALR 824 Query: 546 VIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVA 605 + Q +G Q+ +DDFGTGYSSLS L FP D +K+D+ FVR++ P +++RAI+ Sbjct: 825 TMTQLKAMGVQLSMDDFGTGYSSLSYLKMFPFDQLKIDKSFVRNVTNDPQEAAIIRAIIG 884 Query: 606 VAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 + + L ++++AEGVE+ ++ +FL + G + QG+ ++ P+P A + + Sbjct: 885 LGKTLGIKIVAEGVETVEQYSFLVRAGCDLIQGYFYSPPLPVAACMHFLQE 935 >UniRef50_Q3IEZ9 Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=Q3IEZ9_PSEHT Length = 842 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 189/586 (32%), Positives = 302/586 (51%), Gaps = 5/586 (0%) Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 LS+ + +I + + L A +++ + I+I S I Sbjct: 245 VLSLEHLIHEIESAYCSELEKVLVQRDLALQHSQRNLYLANKIIDSSLDGIMITHSNSTI 304 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 + N TG KEH+VIG+ L S R + ++ E+ Sbjct: 305 MQVNPAFTQLTGYKEHEVIGKCPSIL-SSGRHDKSFYIKMWDAINKTGVWQGEICNRKKN 363 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G + ++ +DITE + A++++ LA D +TGLPNR D Sbjct: 364 GDIYIEWLTIIEIKEPNNSDAIYAAIFSDITERKNAEDKIVQLAYFDELTGLPNRRLFND 423 Query: 254 LIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 + A+ A + + V+++DLD FK+VND+ GH GD LL V+ I + L LA Sbjct: 424 RLKMALAAAHRDQHLLAVMFIDLDRFKEVNDSLGHSAGDCLLTLVAARIEATLNEGDTLA 483 Query: 312 RPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDST 371 R GGDEF+VL A+ ++A +IL L PF++ +EV + S+G A+ P+ G DS Sbjct: 484 RLGGDEFVVLCEINKIDAVASLADKILNNLNSPFQLDHVEVGVTASIGAAVYPDDGLDSE 543 Query: 372 AIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKIT 431 +++HAD AMY +K+ GR F +F P MN R E L + + + AL+N++ +++QPK Sbjct: 544 TLLKHADIAMYRSKDVGRNSFQLFKPSMNARSLERLAMMSRFQHALDNNEFELYFQPKQC 603 Query: 432 WRG-EVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 + ++ +EAL+RW P+ G+I P FI AEE GLIV L WVI + + W+ +G Sbjct: 604 LKSEQIMGVEALLRWHDPDLGMISPAQFIPLAEELGLIVRLDLWVINQAGKVLTLWQKEG 663 Query: 491 I-NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQ 549 + R+A+NISA L+ + + +L+ N +++ELTES I + A + +QQ Sbjct: 664 LVAGRLAINISACHLSQGKLANNIGTMLKHYNLPGSLLEIELTESSFISSFTQAKTQLQQ 723 Query: 550 FSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQA 609 +LG + LDDFGTGYS+LS L + P D +K+D F+ I + + +V A++A+A Sbjct: 724 LKKLGVHIALDDFGTGYSALSYLTKLPFDTLKIDASFIAKIPDEYGNSQIVAALIALASN 783 Query: 610 LNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 LNL V+AEGVE + +L G N QG+ + +P+ + +Y+ Sbjct: 784 LNLMVVAEGVEQPAQKNYLISLGCNVIQGYYYCRPLTQRQWFDFYR 829 >UniRef50_A1K569 EAL/GGDEF/PAS/PAC-domain containing signalling protein n=1 Tax=Azoarcus sp. BH72 RepID=A1K569_AZOSB Length = 947 Score = 796 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 191/580 (32%), Positives = 299/580 (51%), Gaps = 7/580 (1%) Query: 87 REWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGL 146 R +A A + L A +V + A+++LD+ N C GL Sbjct: 362 RRFASYRGEIAQRNAALEAKNRELQLAARVFECGNEAMMVLDADHRFITVNSACAQLAGL 421 Query: 147 KEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVH 206 + G+ +L + + A R R A+ E+ + G L + Sbjct: 422 DAAALRGRPAAQLL-NDHDGAGWERIARE-LAEQGAWSGEVTVRREDGPTLPAQLSVSAV 479 Query: 207 SGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN-- 264 S + + TD++ ++ + LR +A D++T LPNR+ + D AI A Sbjct: 480 LNSAGGATHYVGALTDMSAHKQTEALLRHMAEYDALTDLPNRSLLHDRARAAIQGAARTD 539 Query: 265 NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASN 324 ++++DLD FK VND+ GH GD LLR + + S L +ARPGGDEF++L + Sbjct: 540 RLAALLFIDLDRFKNVNDSLGHSVGDALLRQAAKRLASLLHGGDTIARPGGDEFVMLLAE 599 Query: 325 TSQSALEA-MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYT 383 + A+ A A++I+ PFR+ E+ + S+GIA++P+ G D+ ++R+AD AMY Sbjct: 600 ITDRAVAANRAAQIIDAFSTPFRVEHYELSVTPSIGIAIAPDDGVDADTLLRNADAAMYH 659 Query: 384 AKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRG-EVRSLEAL 442 AKE GR + FT EM+ RV E L L+ LR+A+ D+ + YQP+ + EAL Sbjct: 660 AKESGRNTYRFFTDEMSLRVRERLELENLLRQAMSRDEFEVFYQPQFGLSDHRILGCEAL 719 Query: 443 VRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISA 501 VRW+ PERGLI P FI AE++GLIV +GR V+ WR G+ ++ VAVN S Sbjct: 720 VRWRHPERGLIAPERFIPLAEDTGLIVAIGRRVLETACHTAQGWRAAGLGDIPVAVNASP 779 Query: 502 RQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDD 561 Q+ + +VL E +++ELTES L+ + + + +G ++ +DD Sbjct: 780 VQIHHGNFAETVAEVLAETGLPARLLEIELTESTLMADAAPVAATLAALQDMGVRLAIDD 839 Query: 562 FGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVES 621 FGTGYSSL+ L RF +D +K+D+ F+ D+ P ++ AI+ +A++L + VIAEGVE+ Sbjct: 840 FGTGYSSLAYLKRFQLDKLKIDRSFINDLPGDPDDANITVAIIGIARSLGMSVIAEGVET 899 Query: 622 AKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 A ++ FL G E QG+LF+ P+P + A Sbjct: 900 AAQERFLVDQGCAEGQGYLFSPPVPVESMTALLATARDAA 939 >UniRef50_C6P6Y2 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P6Y2_9PROT Length = 814 Score = 796 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 188/592 (31%), Positives = 281/592 (47%), Gaps = 15/592 (2%) Query: 74 DLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 L + + + N + A + ++S I ++ I Sbjct: 223 YLGFMIASIRRINQNICENIILRIEAAAREGKVRESEERYRLLLSHLPVGIFHYNTDLVI 282 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 N + VIG + + + A + + +E Sbjct: 283 TYCNDRLAELLHNSVEHVIGLDMKLVK----DQAILPSLRKALEGERSNFEGHYLATYSD 338 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 + + + I DITE + A+E++ LA D +TGLPNR + D Sbjct: 339 AEG-WAYITCTPFHDHNGQIAGGIAIVQDITEHKAAEEKINNLAFYDPLTGLPNRRLLLD 397 Query: 254 LIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLA 311 + HA+ + + ++++DLDNFK +ND GH GD LLR V+ + SC+ +A Sbjct: 398 RLQHALASSARSGREGALLFIDLDNFKALNDTLGHDMGDLLLRQVAQRLASCVREGDSIA 457 Query: 312 RPGGDEFLVLASNTSQSALEAMAS------RILTRLRLPFRIGLIEVYTSCSVGIALSPE 365 R GGDEF+V+ + LEA A +IL L LP+++ E + S+G L Sbjct: 458 RLGGDEFVVMLEDLGGHDLEAAAQTEAVGEKILAMLGLPYQLVAHEYRCTPSIGATLFSG 517 Query: 366 HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIH 425 H +++ AD AMY AK+ GR F +M V + L+ L KAL+ Q +H Sbjct: 518 HELAKEELLKRADIAMYQAKQAGRNTVRFFDQQMQDAVTARVALEGELHKALDRQQFRLH 577 Query: 426 YQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAK 485 YQ ++ G EAL+RW PERGL+PP FI AEE+ LI+P+G+WV+ Q+ Sbjct: 578 YQIQVDASGRPLGAEALIRWMHPERGLVPPDQFIGMAEETDLILPIGQWVMDTACAQLKT 637 Query: 486 WRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELA 543 W+ +L +AVN+SA Q ++ +Q + + +ELTES L+EN E Sbjct: 638 WQQHAPTRDLVLAVNVSATQFHQLDFVFQVRATVQRHAIDPKLLKLELTESMLLENIEDT 697 Query: 544 LSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAI 603 + + ++G Q LDDFGTGYSSL L R P+D IK+DQ FVRDI + +V I Sbjct: 698 IRTMNALKEIGVQFSLDDFGTGYSSLQYLKRLPLDQIKIDQSFVRDIASDSNDREIVGTI 757 Query: 604 VAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 +A+AQ L L VIAEGVE+ ++ FL NG QG+LF KP+P FE + Sbjct: 758 IAMAQNLYLDVIAEGVETEEQRQFLQDNGCTHFQGYLFGKPVPVEQFEAMLQ 809 >UniRef50_Q3SK01 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC and GAF sensor(S) n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK01_THIDA Length = 1059 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 197/648 (30%), Positives = 302/648 (46%), Gaps = 17/648 (2%) Query: 19 PYWRLTESSDVLRFSTTETTEPDRTLQLSA--EQAARIREMTVITSSLMMSLTVDESDLS 76 Y + + L T P R +L ++ R + L+ S L Sbjct: 398 EYTLVGTPCEQL-AKTATHVIPRRVSELFPCTAHLSKRRAHAYVGHRLVDSRGQAIGQLF 456 Query: 77 VHLVGRKINKREWAGNASAWHDTPA---VARDLSHGLSFAEQVVSEAHSAIVILDSRGNI 133 V + A + + ++ +A AI++ I Sbjct: 457 VLFSRPLHETAFITSTLQIFASRVAAELERQSADAHIRRQASLLDKAQDAIMVRGLDDAI 516 Query: 134 QRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCK 193 + +N+ E G K +V G+S L + A R N R + + E+ Sbjct: 517 RYWNKGAERLYGWKADEVTGRSTEMLLYG--DPTAFRENTRKVIA-HSEWNGEITQLRKD 573 Query: 194 GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQD 253 G L + + + ++ T++TE + A+ ++ LA D +TGLPNR + D Sbjct: 574 GTALVVEAHWTLLRDENDQPDAILAINTNVTERKAAEHKVHQLAFYDPLTGLPNRELLGD 633 Query: 254 LIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARP 313 + HA+ ++ +DLDNFK +ND GH GD LL+ ++ + +CL LAR Sbjct: 634 RLQHAMQVRHGQVGALLLIDLDNFKTLNDTLGHAMGDLLLQQIAQRLQTCLRKGDTLARV 693 Query: 314 GGDEFLVLASNTSQSA------LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHG 367 GGDEF+++ S S + +IL PF++ + + S+GI L + Sbjct: 694 GGDEFVIVLEGLSASPGDAGSLATRVGEKILASFARPFQLADYVHHCTASIGITLFNDRP 753 Query: 368 SDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQ 427 + + + AD AMY AK GR F P M V L+ +LR+AL +HYQ Sbjct: 754 TTLDELRKRADLAMYQAKAHGRNALRFFDPAMQAVVAARAELEVDLREALRLGAFELHYQ 813 Query: 428 PKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWR 487 ++ RG V EAL+RWQ P+RG I P FI AEE+GLI+PLG WV+ Q+ W Sbjct: 814 AQVDARGCVSGAEALLRWQHPQRGWIAPASFIPLAEETGLILPLGLWVLDVACAQLVAWS 873 Query: 488 DKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALS 545 L +AVN+SARQ + ++ + + +ELTES +++N + + Sbjct: 874 KMPHMARLSLAVNVSARQFRQADFAAQVLAAIERSGADPRRLKLELTESLMLDNLDDTIL 933 Query: 546 VIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVA 605 + G LDDFGTGYSSL+ L R P+D IK+DQ FVRD+ S+ R+I+A Sbjct: 934 KMSALKAHGIGFSLDDFGTGYSSLAYLKRLPLDEIKIDQSFVRDVLIDANDASIARSILA 993 Query: 606 VAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERW 653 + Q+LNL+V+AEGVE+ + AFL ++G QG+LF +P PA FE W Sbjct: 994 LGQSLNLEVVAEGVETDAQHAFLAEHGCQAYQGYLFNRPQPARQFEAW 1041 Score = 111 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 20/170 (11%) Query: 99 TPAVARDLSHGLSFAEQVVSEAHSAIVILDSRG------NIQRFNRLCEDYTGLKEHDVI 152 + + L+ E V+ + ++I ++ I N E TG + +V+ Sbjct: 15 DASGRYEAHQQLALLETSVARLNDIVLITEADHGGAAGPAIVFVNDAFEHITGYRRDEVL 74 Query: 153 GQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKN 212 G+SV L A R + EL + G+ +L + + + Sbjct: 75 GKSVR-LLHGPLTDRAEVRRIGEALENQRPVRSELVNYSKHGEPFWLELDVVPVTDANGY 133 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHA 262 + D+T + A L L NR + A N A Sbjct: 134 YTHCVAVERDVTRRKEADLELARL----------NRAL---RVRSACNKA 170 >UniRef50_Q31NI4 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Synechococcus elongatus RepID=Q31NI4_SYNE7 Length = 929 Score = 796 bits (2057), Expect = 0.0, Method: Composition-based stats. Identities = 188/647 (29%), Positives = 329/647 (50%), Gaps = 15/647 (2%) Query: 18 NPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSV 77 +P ++ + + + L+L+ EQ + S + + D SV Sbjct: 279 DPLLVISGDRRICYANPAAQ----KLLKLNLEQLESQSLDLPLLSDKLTEWALTLPDGSV 334 Query: 78 HLVGRKINKREWAGNASAWH--DTPAVARDLSHGLSFAEQVVSEAHSAIVILDS---RGN 132 V ++ +W G + A + L ++ + + + +VI+D+ Sbjct: 335 AEVEIHRSETDWEGQPADLLSLRDIAERKASEQQLRLLKESLEASFNGVVIVDAIEPDMP 394 Query: 133 IQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTC 192 + N E TG E +++G++ L + R++ V + Sbjct: 395 VIYVNPAFERITGYSEAEMLGRNCRILQGNERDSLQI-EEIHRGLSQAENVHVVIRNFRK 453 Query: 193 KGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQ 252 GQ + + N I DITE++R +E L A+ D +TGLPNR ++ Sbjct: 454 DGQPFWNDLYISPIFNAQGNVTHFIGVQNDITEQKRYEEELSFSASHDVLTGLPNRAVLE 513 Query: 253 DLIDHA--INHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVL 310 D + + + + ++++DLD FK +ND+ GH GD LL +V+ + + + Sbjct: 514 DRLRQGCKMALRQKHSLAILFIDLDGFKLINDSIGHRSGDLLLVEVAQRMCEQVRAGDTV 573 Query: 311 ARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSD 369 AR GGDEF++L + ++ + ++A R+L + P+ I I ++ + S+GI LS Sbjct: 574 ARIGGDEFIILLVDLKLENDVISIADRLLASVARPYHIQGIYLHVTASMGITLSDGDIEQ 633 Query: 370 STAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK 429 T +I+ AD AMY AK+ GR + +T ++N R+ E + L L+KA+E + +++QPK Sbjct: 634 PTQLIQQADLAMYKAKQEGRNNYQWYTNDLNLRLRERVHLRNELQKAIETEAFELYFQPK 693 Query: 430 ITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD 488 I G+V LEAL+RWQ P+ G I P F+ AE++G I+PL +WV+ RQ+ Sbjct: 694 IEGCSGQVIGLEALLRWQHPQMGFISPATFVPIAEDTGQIIPLSQWVLETACRQLRDLLQ 753 Query: 489 KGIN-LRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVI 547 +GI VAVNIS Q +++ LQ+ + +++E+TE+ L +N E A+ + Sbjct: 754 QGIAAPSVAVNISTVQFRRINFVKSVQSALQKYQLKSEHLEIEITENVLFDNTEKAIEKL 813 Query: 548 QQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVA 607 Q+ +LG + +DDFGTG+SSLS L PID +K+D+ FV++I+ ++ + I+++A Sbjct: 814 QRLKELGVNISIDDFGTGFSSLSYLKELPIDTVKIDRSFVQEINTDSRDAAITQGIISMA 873 Query: 608 QALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWY 654 L L V+AEGVE+ ++ FL ++ ++ QG+ FAKPMP A +++ Sbjct: 874 HHLRLNVVAEGVETEQQFKFLQQSNCDQYQGYYFAKPMPFEALKQYL 920 Score = 67.2 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 63/214 (29%), Gaps = 21/214 (9%) Query: 48 AEQAARIREMTVITSSLMMSLTVDESDLSV--HLVGRKINKREWAGNASAWHDTPAVARD 105 A QA R + ++T L +L +LV +++ ++ + D Sbjct: 76 AIQAGITRPIILLTGQGNEQLDASAIELGAADYLVKGQLDCQQLLRSIRYAIDRNLATTR 135 Query: 106 LSHGLSFAEQVVSEAHSAIVILDSRG-NIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 L+ S + + + +G N+ + G + + + +V + S Sbjct: 136 LAESESRYRLLFEANPEPMWVFAKQGLQFLAVNQAASQFFGYSQQEFLAMTVLDI-QSEE 194 Query: 165 EAAASRRNNRVFFRSG--NAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTD 222 E + + + +G +F + ++ D Sbjct: 195 EKTRFLQFFESLICNQIVDPAVGVWAYRHKQGHLVFADVLIHDFEFDNQPCCLILAI--D 252 Query: 223 ITEERRAQERLRI---LANTDSITGLPNRNAMQD 253 ITE ++A L A R + D Sbjct: 253 ITE-KQAARELAHQREQAF---------RKLLND 276 Score = 52.2 bits (125), Expect = 7e-05, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 45/145 (31%), Gaps = 21/145 (14%) Query: 92 NASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDV 151 A + A +++++ ++++ I N + L + Sbjct: 249 LAIDITEKQAARELAHQREQAFRKLLNDNRDPLLVISGDRRICYANPAAQKLLKLNLEQL 308 Query: 152 IGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 QS+ +S + + G+ EVE+ + Sbjct: 309 ESQSLDLPLLSDK-----LTEWALTLPDGSVAEVEIH---------------RSETDWEG 348 Query: 212 NEIFLICSGTDITEERRAQERLRIL 236 L+ DI E + ++++LR+L Sbjct: 349 QPADLLSL-RDIAERKASEQQLRLL 372 >UniRef50_Q3A628 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A628_PELCD Length = 1063 Score = 796 bits (2056), Expect = 0.0, Method: Composition-based stats. Identities = 188/577 (32%), Positives = 308/577 (53%), Gaps = 11/577 (1%) Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 + + A+ + + + +++ D +G + N+ D G Sbjct: 480 SQGQPSAVLTISRDVTEIKKTQQQFHQAKWSIDASLTPMLMADLQGRLTYANQAALDLWG 539 Query: 146 LK-EHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF 204 E +V+G+++ + +E R ++ + E G + Sbjct: 540 YAGEEEVLGKNIVEF----QEDPQRTRIIMEILKARGVWRGEGRGKQKNGNGFDVELQAQ 595 Query: 205 VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADN 264 V + ++ S DIT++R+ + +++ LA DS+TGLPNR ++D ++ A+ A Sbjct: 596 VVKDQNGGPLSILASAIDITDKRKTELQIKKLAYFDSLTGLPNRTLLKDHMELALGQARR 655 Query: 265 --NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLA 322 V V+ LDLDNFK +ND GH GD L+R V+ + + LAR GGDEF++L Sbjct: 656 LNKFVAVLLLDLDNFKHINDTLGHATGDLLIRSVAERLRTECRTCDTLARWGGDEFVLLL 715 Query: 323 SNTSQ-SALEAMASRILTRL-RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTA 380 ++ + + + L PF ++ T+ S+GIAL P+ G D +++ ADTA Sbjct: 716 TDLDDIQNTTSATEKFMALLTERPFATSECDINTTASIGIALYPQDGQDPETLLKRADTA 775 Query: 381 MYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSL 439 MY AK+ GR + F+ ++ ++ ++ NLR AL+ ++ + YQP+I + + + Sbjct: 776 MYEAKKNGRNGYHFFSLQLAEQAERRHRMEINLRSALKEGEMQLVYQPQIDLGKVRITGM 835 Query: 440 EALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD-KGINLRVAVN 498 EAL+RWQSPE G I P FI AEE+GLI PLG WV+ RQ A W+ + L VAVN Sbjct: 836 EALLRWQSPEEGTISPARFIPLAEETGLIYPLGEWVLQQACRQGAIWQKTEASPLCVAVN 895 Query: 499 ISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVH 558 +SA+Q + +K++L+E +++E+TES +EN E A+ + + +LG Q Sbjct: 896 LSAKQFHQPDLAKNIKKILRETGLSPHLLELEITESVFLENMEAAIEALTELKKLGVQFS 955 Query: 559 LDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEG 618 +DDFGTGYSSLS L + PID IK+ Q FVRDI +++++A +A+A++L +++IAEG Sbjct: 956 IDDFGTGYSSLSYLKKLPIDRIKIAQEFVRDIDTDDGDKAIIKATIAMAKSLGMKLIAEG 1015 Query: 619 VESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 VE+ ++ AFL +G + QG+ FAKPMPA + Sbjct: 1016 VENHQQLAFLLLHGCHAMQGYYFAKPMPAQEVPSFIH 1052 Score = 54.1 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 64/197 (32%), Gaps = 6/197 (3%) Query: 41 DRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTP 100 DR LQ ++ + ++I + + L+ + +++ L+ + Sbjct: 314 DRALQHFGIDRHQLPQDSIILNDMSSELSAHKRQVTIALLIAGVFLCLSCTLTLMIMRYK 373 Query: 101 AVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV-FKL 159 + L + ++ I ++D NI N + + G +++GQ L Sbjct: 374 KTLQALRQSEGTLKAMLESIADPIHMVDRDLNILWANDIAKQLFG---KNLVGQKCYAAL 430 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKF-VHSGSGKNEIFLIC 218 S + F G+A+ E + + S ++ Sbjct: 431 HRSPTPCDPMCHAIKA-FSDGHAHSSENLFFDINDEERCFLVTANVASTDSQGQPSAVLT 489 Query: 219 SGTDITEERRAQERLRI 235 D+TE ++ Q++ Sbjct: 490 ISRDVTEIKKTQQQFHQ 506 >UniRef50_A4J477 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Firmicutes RepID=A4J477_DESRM Length = 947 Score = 795 bits (2055), Expect = 0.0, Method: Composition-based stats. Identities = 168/442 (38%), Positives = 270/442 (61%), Gaps = 5/442 (1%) Query: 216 LICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLD 273 + ++ E +R +E LR LA DS+T LPNR D + A+N A NK + V++LD Sbjct: 495 YQAAQQELAERKRIEEILRYLAYHDSLTELPNRTLFNDRLSMALNQAHRNKNKLAVMFLD 554 Query: 274 LDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSA-LEA 332 LD+FKKVND GH GDQLL+ ++ L +AR GGDEF +L N +++ Sbjct: 555 LDHFKKVNDTLGHDIGDQLLKGIAQRFSKLLRKGDTIARIGGDEFTILLHNITRAENASI 614 Query: 333 MASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF 392 +A +I+ L P+ IG E + + S+GIAL P+ G+D+ +++++AD AMY AKE GR + Sbjct: 615 VADKIIDTLANPWIIGNHEFHITTSIGIALYPDDGTDAESLLKNADAAMYQAKEMGRNNY 674 Query: 393 CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERG 451 +TP MN + L+ NLR+AL+ + VI+YQP++ G++ +EAL+RWQ P+RG Sbjct: 675 QFYTPTMNAQTLRRFELENNLRRALDRKEFVIYYQPQVEIHTGKIVGVEALIRWQHPQRG 734 Query: 452 LIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIF 510 +I P +FI AEE+GLI+P+G W++ Q W+D+G +RV VN+SARQ + Sbjct: 735 MISPAEFIPMAEETGLIIPIGEWILRRACAQNKAWQDRGFSPMRVTVNLSARQFLQPHLP 794 Query: 511 TALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLS 570 + VL++ +++E+TES +++ + + ++G + +DDFGTGYSSL+ Sbjct: 795 QYISNVLEDTGLGPQWLELEITESLAMKDVAFTEKTLIELRKMGITLAIDDFGTGYSSLN 854 Query: 571 QLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTK 630 L R PID +K+D+ F+ D++ + +++ AI+ + L ++V+AEGVE+ ++ FL + Sbjct: 855 YLKRLPIDILKIDRSFIHDLNTESDDVAIISAIITLGHNLKMKVVAEGVETKEQLMFLRQ 914 Query: 631 NGINERQGFLFAKPMPAVAFER 652 + QG+LF KP+P E+ Sbjct: 915 QQCDLMQGYLFTKPLPVRELEQ 936 Score = 57.6 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 6/142 (4%) Query: 96 WHDTPAVARDLSHGLSFAEQVVSE--AHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIG 153 + +L + + +A + D G + N ++ +V+G Sbjct: 47 ITTEVSSLENLKQEEQGLKDYIDNLITLNAKLSTD--GTVLLINETALRTFHMQPEEVVG 104 Query: 154 QSVFKLFMSRREAAASRRNNRVF--FRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGK 211 + ++ +A + +G E G++++++ Sbjct: 105 KKLWDTPWWSYDADLHTQLKNAVKQAATGQTIYYETINHLVSGKKIYIYFTLNPVLNKNN 164 Query: 212 NEIFLICSGTDITEERRAQERL 233 I+L+ G DIT+ + ++ L Sbjct: 165 EVIYLVAEGRDITKRKMIEQDL 186 Score = 52.6 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 52/157 (33%), Gaps = 15/157 (9%) Query: 111 SFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 ++ A ++ + + N E K D+IG+++++ F Sbjct: 219 ERLNNILESITDAFYAVNHQWEVTYVNTEAEKLLHKKRLDIIGKNIWQEFSEMVHTK-FY 277 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 + E + G + N + S I+ DITE + Q Sbjct: 278 HILHQVMSEQIYQQFEYFFQ-PTG----KWFNIHAYPSSDGLSIY----FHDITEYKLVQ 328 Query: 231 ERLRILANT-DSI--TGLP--NRNAMQDLIDHAINHA 262 E++ + S+ T L NR + +L+ + + Sbjct: 329 EKMSLQNQYLSSLHETTLALMNRLNLDELLKAIVTRS 365 >UniRef50_C6MET2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MET2_9PROT Length = 753 Score = 794 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 180/578 (31%), Positives = 290/578 (50%), Gaps = 8/578 (1%) Query: 86 KREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTG 145 R+ S + ++ L + +V + AI+I D+ I N+ TG Sbjct: 176 HRKLLKIGSFIIGIALEQQKINEQLYLSSKVFENSTEAIMIADANKIIISTNKALHIITG 235 Query: 146 LKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFV 205 +VIG+ + S R + + + + ++ E+W G+ + N Sbjct: 236 FTAEEVIGK-PTSIVTSIRHSTKFFQKIWLSVKQSGHWQGEVWNRHKYGREYPAWLNISS 294 Query: 206 HSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN 265 + + + + ++IT+++++ E + AN DS+TGLPNRN D + H I +A Sbjct: 295 VLSKKGSICYYLINFSNITDKKKSDEIIWRQANYDSLTGLPNRNMFYDRLSHDIKNAART 354 Query: 266 K--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLAS 323 + V+++DLD FK+VND++GH GD LL + + + C+ +AR GGDEF ++ + Sbjct: 355 GMLLAVLFIDLDRFKEVNDSFGHSVGDALLVEAAKRLNGCVRETDTVARLGGDEFTIILN 414 Query: 324 NTSQSA-LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMY 382 + E + IL L PF + Y + S+G+ P + ++++AD AMY Sbjct: 415 GINDQHCAERIIQMILLELTKPFHLNAKLAYVTASIGVTFFPADAGSAEILMKNADQAMY 474 Query: 383 TAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEA 441 AK GR FT M + + LR AL QL + YQP + G + EA Sbjct: 475 AAKNNGRNCCSYFTSNMRKATETRSRIAYELRHALREQQLFLMYQPIVKLATGSIHKAEA 534 Query: 442 LVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG-INLRVAVNIS 500 LVRWQ PERG + P++FIS AEES LI +G WV V QVA W+ N ++++N S Sbjct: 535 LVRWQHPERGTVSPVEFISIAEESNLISEIGDWVFKQAVNQVAAWQANYNTNFQISINKS 594 Query: 501 ARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLD 560 +Q + + L E + I VE+TE+ L++ EL + + F G QV +D Sbjct: 595 PKQFISK--MSDWVNHLHEQKLDGHSIIVEITENLLLDVHELVVKQLLNFRDAGVQVAID 652 Query: 561 DFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVE 620 DFGTGYSSLS L +F ID +K+DQ F+ ++ + + L A++ +A L ++VIAEGVE Sbjct: 653 DFGTGYSSLSYLKKFDIDYLKIDQSFISNLDSRSNDRILCEAVITMAHRLGMKVIAEGVE 712 Query: 621 SAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYL 658 + + L G + QG+ F+KP+ FE + ++ Sbjct: 713 TDSQKQLLIAMGCDYGQGYFFSKPLTTENFEVFLQQNA 750 >UniRef50_Q2YAT8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=4 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YAT8_NITMU Length = 705 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 197/648 (30%), Positives = 331/648 (51%), Gaps = 23/648 (3%) Query: 19 PYWRLTE--SSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLS 76 P + ++++ +++ EP R L + E+ + + E Sbjct: 67 PEEFMDNMSHQAIVQYGSSQLKEPQRFLH-ATEEIYHAWPPESLDLLQFNDCRIFERYTK 125 Query: 77 VHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRF 136 ++ + R W+ R+ + +V ++ AI++ D G I + Sbjct: 126 AKVLEGQNMVRVWS------LRNITERREADAYKAQLAAIVESSNDAIIVQDLNGIITSW 179 Query: 137 NRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGN---AYEVELWIP-TC 192 N E G + +VIG SV L + + +SG +E W Sbjct: 180 NAGAEGLFGYRASEVIGSSVEILIPP--DLREEEGDIMCLIKSGRRADHFETVRWGKGRK 237 Query: 193 KGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQ 252 + + N I DIT+ + +QER+ LA+ DS+TGLPNR + Sbjct: 238 ---PIDVSVTISAMKDRAGNIIGASKIVRDITQRKESQERIEYLAHYDSLTGLPNRTLLS 294 Query: 253 DLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVL 310 D + AI +A ++ ++++D+D FK VND+ GH GD+LL+ V+ + S + + Sbjct: 295 DRLRIAIENARRYSIRLALLFVDIDRFKLVNDSLGHEIGDKLLKAVAQRMQSTVRQADTV 354 Query: 311 ARPGGDEFLVLASNTS-QSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSD 369 +R GGDEF+VL S + A +++T + P++I E+ + S+GI++ P++G D Sbjct: 355 SRVGGDEFVVLLSRIETATDAARSAEKLITSISQPYQIEEHELLLTASIGISIYPDNGKD 414 Query: 370 STAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK 429 ++++ R+AD AMY+AK GR ++ ++ ++ E L L+ +LR AL D++ YQP+ Sbjct: 415 ASSLTRNADAAMYSAKGQGRNRYQFYSEDLTYAAAERLRLEHDLRGALSRDEIFPLYQPQ 474 Query: 430 ITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRD 488 I G V +EAL+RW +GLI P FI AE+SGLI+ LG +++ Q +W + Sbjct: 475 IELATGRVIGVEALMRWNRAGQGLISPASFIPVAEDSGLILALGEYILRKACLQARQWHE 534 Query: 489 -KGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVI 547 +G +AVN+SA Q + +VL E F +++E+TES +++ E + + Sbjct: 535 HQGFQGTIAVNVSAVQFRQNDFTDVVLRVLSETGFPPECLELEVTESVVMQGLESVVQKM 594 Query: 548 QQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVA 607 G ++ +DDFGTGYSSLS L +F ID +K+DQ FVRD+ +Q+++RAIVA+ Sbjct: 595 GILESHGIKLAIDDFGTGYSSLSYLRQFAIDRLKIDQSFVRDLPGDADAQAIIRAIVAMG 654 Query: 608 QALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYK 655 ++L L+V+AEGVE+ + FL E QG+L+A+PM + FE W K Sbjct: 655 RSLGLRVMAEGVETEAQARFLQDIECTESQGYLYARPMKSNDFEAWLK 702 >UniRef50_A3DCG7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Clostridium thermocellum RepID=A3DCG7_CLOTH Length = 862 Score = 794 bits (2052), Expect = 0.0, Method: Composition-based stats. Identities = 186/568 (32%), Positives = 305/568 (53%), Gaps = 10/568 (1%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 R+L + +S A++ D G + N + GL E +++G+ + Sbjct: 283 KKISKAYRELRKQHEWLRITLSSIGEAVITTDENGTVTFSNYEIQKMLGLSEEEILGKKL 342 Query: 157 FKLFMSRREAAA--SRRNNRVFFRSGNAYEVE--LWIPTCKGQRLFLFRNKFVHSGSGKN 212 KL + + G+ ++E L + T G+RL + Sbjct: 343 DKLLSGLVDKREKVYKIPIEEVVNRGSMIKLETDLSLVTPGGRRL-VEGTVAPIRNDSDV 401 Query: 213 EIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVV 270 I + + DITE ++ E L + D +TGLPNR+ D + A+ + N ++ Sbjct: 402 IIGTVVALKDITEIKKKDEILYNMEYYDPLTGLPNRSLFSDRLKMALAQSKRNNEMCALI 461 Query: 271 YLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ-SA 329 LDLDNFK +ND GH GD LL+ V+ I L +AR GGDEF+++ + Sbjct: 462 ILDLDNFKAINDTLGHSVGDMLLKQVAEKIKGYLREVDTVARIGGDEFIIIQPQIKDIND 521 Query: 330 LEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGR 389 A RIL + + P+ + E Y + S+GI + P G D I ++ADTA+Y AKE GR Sbjct: 522 ATRAADRILKKFQQPWILEGKEYYITASMGIGIYPNGGEDPQTIFKNADTALYRAKELGR 581 Query: 390 GQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSP 448 + ++T MNQ+V + L ++ +LR+A+E ++ V+ YQP+I G++ EAL+RW P Sbjct: 582 NNYQLYTESMNQKVLQRLDIENSLRRAIEKEEFVLFYQPQIDIKTGKIVGFEALLRWYHP 641 Query: 449 ERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQ 507 + GL+PP++FI AE+SGLIV +G WV+ RQ KW + G+ ++VN+SARQ Sbjct: 642 DYGLMPPMEFIPVAEDSGLIVVIGEWVLETACRQNKKWIECGLEPHLISVNLSARQFQRS 701 Query: 508 TIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYS 567 I + ++ +++E+TES +++ + V+ Q + G +V LDDFGTGYS Sbjct: 702 NIVEVIDRIRSSTGLAPELLELEITESTAMQDLSFTIDVLNQLRKKGIRVSLDDFGTGYS 761 Query: 568 SLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAF 627 SL+ L + PID +K+D+ FV+DI +++ + ++++A L+L V+AEGVE+ ++ F Sbjct: 762 SLNYLRQLPIDTLKIDKSFVQDIRANSKEEAIAKTVISLAHKLDLTVVAEGVETKEQLLF 821 Query: 628 LTKNGINERQGFLFAKPMPAVAFERWYK 655 L K ++ QG+LF+KP+PA E+ + Sbjct: 822 LKKEKCDKAQGYLFSKPLPAEEIEKMLR 849 >UniRef50_A0KIJ4 MorA n=2 Tax=Aeromonas RepID=A0KIJ4_AERHH Length = 838 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 170/572 (29%), Positives = 279/572 (48%), Gaps = 19/572 (3%) Query: 100 PAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKL 159 L + H I+I D I R N TG VIG + Sbjct: 260 ELERLQSDAQLRLSAVAFE-THEGIIITDPDFKILRVNHAFSQITGFDSQRVIGLHL--- 315 Query: 160 FMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICS 219 + + + ++ E G + + Sbjct: 316 ---GNDLWCGLGGLGYELGTLSRWQGETQRLHADGYPYPQWEIVTPVQDDRGEISHFVIC 372 Query: 220 GTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKV--GVVYLDLDNF 277 DI+E + A+ R++ LA D +TGLPNR + + + HA A + + ++++DLD+F Sbjct: 373 FEDISERKEAERRIQDLAYYDELTGLPNRRQLHETLAHAFGEASRDYLIGALLFIDLDHF 432 Query: 278 KKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQS------ALE 331 K +ND+ GH GD LL++V+ + + LAR GGDEF++L + S S + Sbjct: 433 KTINDSLGHATGDWLLKEVASRLKRLVRQGDCLARLGGDEFVLLLPSLSASPPQAEMQAD 492 Query: 332 AMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQ 391 +A R+++ + P+ ++ SVGI L P +++ ADTAMY AK GR Sbjct: 493 LIAERLISEIAAPYNHAGQVLHIGASVGITLFPGREQGVDDLLKQADTAMYQAKSAGRKT 552 Query: 392 FCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPK--ITWRGEVRSLEALVRWQSPE 449 F M + L + LR AL +L ++YQP+ + G++ +EAL+RWQ P Sbjct: 553 RRFFDASMQLQADRRLLIHNELRSALNQQELTLYYQPQHMVEG-GDIIGVEALIRWQPPG 611 Query: 450 RGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLR-VAVNISARQLADQT 508 R L+ P +FI AEE+ LIV +G WV+ + Q +W + GI++ ++VN+SA+Q Sbjct: 612 RALVSPAEFIPIAEETDLIVDIGNWVLYEACAQYVRWEENGIHIPQLSVNVSAKQFHATD 671 Query: 509 IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSS 568 + VL + +++E+TES ++ + E +S + + LG +DDFG GYSS Sbjct: 672 FVDRIHDVLASTGMDPASLNLEITESVVLGHAEDTISKMSELKALGISFAIDDFGAGYSS 731 Query: 569 LSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFL 628 LS L R P D +K+D+ F++DI + + ++V A++A+A+ + V AEGVES ++ FL Sbjct: 732 LSYLKRLPADELKIDRSFIQDIPRDGDNMAIVEAVIAMARHMGFNVTAEGVESRQQLEFL 791 Query: 629 TKNGINERQGFLFAKPMPAVAFERWYKRYLKR 660 G + QG+L +KP+P ER+ +R + Sbjct: 792 QAQGCHFYQGYLASKPLPVPYLERYVQRLARS 823 >UniRef50_C5SCB7 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SCB7_CHRVI Length = 811 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 197/592 (33%), Positives = 303/592 (51%), Gaps = 5/592 (0%) Query: 68 LTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVIL 127 LT+ + + + + + G A+ D D GL A +V + AI + Sbjct: 211 LTLRQGRVLERVTLPQYARGRPIGRVYAFRDITQRLHD-EQGLKLAARVFEASLDAIFVT 269 Query: 128 DSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVEL 187 D I N E TGL +++GQ + + + R ++ E+ Sbjct: 270 DPEFRIVAVNPAGERMTGLAGAELVGQRLDRSLR-LWANETLDPDIRAALDRSGHWQGEI 328 Query: 188 WIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPN 247 G + + + D++E A++R+ LA D++TGLPN Sbjct: 329 EQHHADGSTFPCLVSLMRVLDTEGLPFHYVGFVKDLSETVEARQRIEQLAFNDALTGLPN 388 Query: 248 RNAMQDLIDHAINHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLE 305 R + + ++ +I A + V+++D+D FK +ND+ GH+FGD++L +V+ I CL Sbjct: 389 RLRLTERLEFSIELARRENTRFAVLFIDIDRFKHINDSLGHVFGDRVLIEVAQRIRQCLR 448 Query: 306 HDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPE 365 H +AR GGDEF++L E +A R+L + PF + ++ SCS+GIAL PE Sbjct: 449 HVDTIARLGGDEFVLLLHRVESHGAELVARRLLESMAQPFELDGLKFSLSCSIGIALYPE 508 Query: 366 HGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIH 425 G +I++AD+AMY KE GRG C + +MN + E + +D +R+AL+ + Sbjct: 509 DGETLDDLIKNADSAMYHVKEHGRGDCCFYQRQMNVGLLERVRIDHAMREALQQGHFWLA 568 Query: 426 YQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVA 484 YQP+I G V EALVRW P+ G + P FI AEE+G IV LG WV+ + +RQ A Sbjct: 569 YQPQIDLVSGLVIGAEALVRWNDPDLGELAPGRFIPIAEETGFIVALGGWVLREAIRQGA 628 Query: 485 KWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELAL 544 W+ +GI L ++VN+SA Q L Q L E +++ELTES LI+N E L Sbjct: 629 HWQAQGIRLSLSVNVSATQFHQANFIDLLAQWLDETGLPPGRLELELTESILIQNVEETL 688 Query: 545 SVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIV 604 ++ LG ++ +DDFGTGYSSL+ L RFPI +K+D+ FV DI ++ A++ Sbjct: 689 RRLENLVALGVRLAIDDFGTGYSSLAYLKRFPIHKLKIDRSFVCDIPHDESDTAIATAVI 748 Query: 605 AVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 +A L L+VIAEGVE+ + FL G +E QG+L A + AF + Sbjct: 749 GLASVLKLRVIAEGVETDIQRQFLLDAGCHEFQGYLCAPALEPAAFLARIAQ 800 Score = 65.3 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 27/232 (11%), Positives = 67/232 (28%), Gaps = 20/232 (8%) Query: 7 STTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMM 66 L + S L + + E A R T+++ +L+ Sbjct: 32 VNRAAEELLGQGRASLVGRSMSELACTPEDL--------FFWEDVAAGRGDTLLSETLLR 83 Query: 67 SLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFA----EQVVSEAHS 122 D + ++V +++ + A + R + L + + Sbjct: 84 R--QDGTLVTVLRRVGRVSCPDGRCLYLACFSNQSERRAVESELEKLVAELRATLESSAD 141 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQS---VFKLFMSRREAAASRRNNRVFFRS 179 I++ D G I+ FN+ + L + ++ + + A Sbjct: 142 GILVTDLDGAIRSFNQRFAELWRLPAALLTERNDAGIHDWMVREVLDAEGYAARLQAIAQ 201 Query: 180 GNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQE 231 E + +G+ + + + I + + DIT+ ++ Sbjct: 202 NPLLEASDLLTLRQGR---VLERVTLPQYARGRPIGRVYAFRDITQRLHDEQ 250 Score = 65.3 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 5/126 (3%) Query: 112 FAEQVVSEAHSAIVILD-SRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASR 170 A+ ++ E A+ ++D S + NR E+ G ++G+S+ +L + + Sbjct: 7 LAQALIDELIDAVWLVDGSDQRLLAVNRAAEELLGQGRASLVGRSMSELACTPEDLFFWE 66 Query: 171 RNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQ 230 V G+ E + G + + R S + + ++ +E R + Sbjct: 67 D---VAAGRGDTLLSETLLRRQDGTLVTVLRRVGRVSCPDGRCL-YLACFSNQSERRAVE 122 Query: 231 ERLRIL 236 L L Sbjct: 123 SELEKL 128 >UniRef50_Q1N2J6 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N2J6_9GAMM Length = 1407 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 189/657 (28%), Positives = 326/657 (49%), Gaps = 10/657 (1%) Query: 4 VRESTTLYNFLGSHNPYWRLTESSDVLRFSTT-ETTEPDRTLQLSAEQAARIREMTVITS 62 + + N + ++ + E + + + L + + V T Sbjct: 740 LSYISASINKMLGYDSDQVMREGLSLFLITESVNKLIQALERDLQLALSISSFKDQVRTM 799 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 L + N+ A R + H A +V + Sbjct: 800 DLDAQTFSGVPVILEMQSSILRNESGAIEGILATCRDVTQRRFIEHEARTASEVFENSSE 859 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 AI++ S G I R NR TG VIG + + + + + ++ R Sbjct: 860 AIMMTTSTGLISRVNRAFTHLTGFDGQHVIGVNPKQFIA-KDVSHQTMQDIRDALLVDGY 918 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 ++ EL KG++ + I +DIT ++ + R++ LA D + Sbjct: 919 WQGELDYINRKGEKHPSWTGVTALKDEMGQIQSHIIISSDITHRKQTEARIQHLAYFDPL 978 Query: 243 TGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILS 302 TGLPNR M + +D + + +++ ++++DLD FK +ND GH GDQ+L++V+ + Sbjct: 979 TGLPNRAQMHEALDRLMAK-EESQLALLFIDLDRFKPINDTMGHPAGDQVLKEVASRLKE 1037 Query: 303 CLEHDQVLARPGGDEFLVLASNTSQSA-----LEAMASRILTRLRLPFRIGLIEVYTSCS 357 + +++R GGDEF V+ + ++ + ++ RIL ++ PF I ++Y S S Sbjct: 1038 AVGAKNLVSRIGGDEFTVIMATLPETEQAIQTIIDVSERILHQMMQPFFIEDRQLYLSAS 1097 Query: 358 VGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKAL 417 VGIAL PE+ T ++R+ADTAMY AK G+ F + EMN++ E L L+ NL AL Sbjct: 1098 VGIALYPENALSGTDLLRNADTAMYHAKAMGKNNFQFYAEEMNEKAMERLELENNLHLAL 1157 Query: 418 ENDQLVIHYQPKITWRGE-VRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVI 476 + D+ + +Q + + + +E L+RW P+ GL+ P FI EE+GLIVP+G WV+ Sbjct: 1158 QRDEFELTFQAQWDIKHNCICGVETLLRWHRPDIGLVGPDKFIPIIEETGLIVPIGEWVL 1217 Query: 477 LDVVRQVAKWRDKGINLR-VAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESC 535 Q+ W++ G + +AVN+SARQ D + + +++ E + I++ELTES Sbjct: 1218 RRACEQIMDWQEAGYVIPKLAVNLSARQFKDAQMLDRICRIVDETGVDPELIELELTESI 1277 Query: 536 LIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPV 595 L+++ + L+V+ + ++G + +DDFGTGYSSLS L +FP+ +K+D+ F++++ Sbjct: 1278 LMDDIDRTLAVLNEARKMGFGLSIDDFGTGYSSLSYLKQFPVSQLKIDKSFIQNLPYNQE 1337 Query: 596 SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 + R IVA+A L L VIAEGVE+ + FL G + QG++++ P+PA F + Sbjct: 1338 DGQITRTIVAMANNLGLGVIAEGVENESQRQFLKTIGCYQVQGYMYSHPVPADLFAQ 1394 Score = 53.7 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 65/207 (31%), Gaps = 13/207 (6%) Query: 45 QLSAEQAARIREMTVITSSLMMSLTVDE--SDLSVHLVGRKINKREWAGNASAWHDTPAV 102 +L E A IR+ S + + + V+ ++ + + + +D Sbjct: 519 ELMQEMAEGIRQGAKSFSREVAFINAKGVKNHYLVNATLDQVGQDQAIVSFIDINDRIKA 578 Query: 103 ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCE-DYTGLKEHDVIG-QSVFKLF 160 L F V+ + + D RF+ + G ++ + +L Sbjct: 579 ELALKDSEQFWSNVIQTLPDTVYVNDLFAKQTRFSSRHIGELLGYSSEELEEIEHWRQLI 638 Query: 161 MSRREAAASRRNNR-VFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNE-IFLIC 218 + + ++ R G E + G + + S + + + Sbjct: 639 HPDDVSKSDAAISQLKTMRPGEVKETTARLKHKNGNWRVIRFRDCIFSSETQVPAQYYVG 698 Query: 219 SGTDITEERRA-------QERLRILAN 238 DITEE A + R R+LAN Sbjct: 699 MARDITEEEDAKIQLSFSERRYRLLAN 725 >UniRef50_Q47H73 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica RCB RepID=Q47H73_DECAR Length = 585 Score = 793 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 171/556 (30%), Positives = 286/556 (51%), Gaps = 9/556 (1%) Query: 105 DLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQ-SVFKLFMSR 163 ++ + + A I +L + N G +++ Q L + Sbjct: 27 AMTEQETMFRSTMEAAQVGIFVL-QNQRFKYVNPFLVGMFGYSAEELLEQMGPLDLILPE 85 Query: 164 REAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDI 223 + A + EL G L + + + DI Sbjct: 86 QHAFVIEQMQLRAAGVLGH-NYELTGLRKDGSTLPIMVLGSP--SVIGGLPASVGTVLDI 142 Query: 224 TEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVN 281 + ++ A++R+R LA+ D +TGLPNR +++ + + A+ K + V++LDLD+FK+VN Sbjct: 143 SAQKAAEQRIRELADYDVLTGLPNRRLLRERFEQLLAAAEREKSEIAVIFLDLDHFKRVN 202 Query: 282 DAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRL 341 D+ GH GD+LL +V+ + S + LAR GGDEF+ +A +A R++ Sbjct: 203 DSLGHSVGDELLCEVARRLDSVVRRIDTLARLGGDEFIFAMPGFHTAAAVEVARRLVEVF 262 Query: 342 RLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQ 401 PF + E+ + S+GI++ P G D ++R+ADTAMY AKE GR F ++ EMN Sbjct: 263 SRPFEVAGHELTVTPSLGISIYPHDGRDLETLLRNADTAMYRAKEMGRNAFQFYSSEMNT 322 Query: 402 RVFEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFIS 460 + L +++NLR+AL ++ ++HYQP + G + +EAL+RW PE GLI P FI Sbjct: 323 TTLDRLLMESNLRRALVQNEFILHYQPLVNLETGLIIGVEALIRWLHPELGLIMPDRFIH 382 Query: 461 YAEESGLIVPLGRWVILDVVRQVAKWRDKGI-NLRVAVNISARQLADQTIFTALKQVLQE 519 AEE+GLI P+G WV+ + RQ W D G+ + +AVN++ Q + L Sbjct: 383 VAEETGLINPIGDWVLCEACRQAKAWCDAGLPPICMAVNVAPVQFRQAGFVEMVAGALAT 442 Query: 520 LNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDA 579 + +++ELTE ++ + ++ + + ++G ++ LDDFGTGYSSL+ L RFP+ Sbjct: 443 SGLDASRLELELTERTVMHDADINMGTLSALHRMGVELSLDDFGTGYSSLAYLKRFPVGK 502 Query: 580 IKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGF 639 +K+D+ FV D+ P ++ IV++ ++L + V+AEGVE ++ A L K G + QG+ Sbjct: 503 LKIDRSFVNDLETDPDDWAIASTIVSMGRSLRMTVLAEGVEKVEQLALLRKMGCDMAQGY 562 Query: 640 LFAKPMPAVAFERWYK 655 F++PM A + Sbjct: 563 YFSRPMSADGMADMLR 578 >UniRef50_B9ZNS8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS8_9GAMM Length = 944 Score = 793 bits (2050), Expect = 0.0, Method: Composition-based stats. Identities = 186/657 (28%), Positives = 305/657 (46%), Gaps = 20/657 (3%) Query: 16 SHNPYWRLTESSDVLRFSTTETTEPD-RTLQLSAEQAARIREMTVITSSLMMSLTV---- 70 SH + ++ +L F + + R + + R+RE + + Sbjct: 271 SHEWEFVAGDTRKLLGFPSRNLGRGELRARHIHPDDLPRVREAAHAAGNEPQVVDYRFAH 330 Query: 71 -DESDLSVHLVGRKINKREWAGNASAWHDTPAVARDL----SHGLSFAEQVVSEAHSAIV 125 + + + + + R + + VV+ I Sbjct: 331 RNGQWIWLRDILSSAEDPGSRRSLRGLTLDVTAHRRAAAALKESENRYQDVVNHISEVIF 390 Query: 126 ILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEV 185 D+ G N E TG K + +GQ + A + + +A Sbjct: 391 RTDAEGRWTLLNPAWEALTGFKVEETLGQPMCAFVDPEDRDDAQSFCSTLLEGGTHAQSE 450 Query: 186 ELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGL 245 E+ + T G ++ + + + DI++ + A+E +R LA D +TGL Sbjct: 451 EIRLRTHDGSHRWVSIYASARFDEDGHIMATFGTMMDISDRKEAEEEIRRLAFFDGLTGL 510 Query: 246 PNRNAMQDLIDHAIN--HADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSC 303 PNR + D + A+ + V+++DLDNFK +ND GH GD LL V+ + + Sbjct: 511 PNRTLLHDRLGQALANTARTRHHGAVLFIDLDNFKDINDTLGHAVGDDLLCQVARRMENS 570 Query: 304 LEHDQVLARPGGDEFLVLASNTSQS------ALEAMASRILTRLRLPFRIGLIEVYTSCS 357 + LAR GGDEF+++ ++ EA+ +++ LR PF++ + + S Sbjct: 571 VREADTLARLGGDEFVIILNDLHPDPARAATEAEAVGRKLINLLREPFQLAGQNRHVTPS 630 Query: 358 VGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKAL 417 +G L +++ AD AMY AK GR + PE+++ V L+ LR AL Sbjct: 631 IGATLFSGRSLGVEEVLKQADLAMYRAKNAGRNTVRFYDPELHRAVEARFELENELRHAL 690 Query: 418 ENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVIL 477 + D+ + YQP++ G V E L+RW+ +RG I P +FI AE++GLIVP+GR V+ Sbjct: 691 DEDRFSVVYQPQVDAEGRVIGAELLLRWEHAQRGAISPAEFIPVAEQTGLIVPIGRKVLR 750 Query: 478 DVVRQVAKWR--DKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESC 535 Q+ W+ +L ++VNISARQ D L+++LQE + +ELTES Sbjct: 751 TACAQLGAWQHTAAFRDLTLSVNISARQFRDPHFVPHLREILQETGAPGDRLKLELTESM 810 Query: 536 LIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPV 595 L+E + ++ I + LG + LDDFGTGYSSL+ L + P+ +K+DQ FVRD+ P Sbjct: 811 LLEEIDTVVAHIDELRALGVEFALDDFGTGYSSLAYLKQLPLAQLKIDQSFVRDVLDDPN 870 Query: 596 SQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFER 652 ++ + +V +A+ L+L VIAEGVE+ ++ AFL G QGFL+ P ER Sbjct: 871 DAAIAQMVVNLARTLDLDVIAEGVETVEQRAFLFGLGCRHFQGFLYGYPGDLADLER 927 >UniRef50_Q5P4K8 Putative sensory box/GGDEF family protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4K8_AZOSE Length = 698 Score = 792 bits (2048), Expect = 0.0, Method: Composition-based stats. Identities = 188/549 (34%), Positives = 293/549 (53%), Gaps = 6/549 (1%) Query: 108 HGLSFAEQVVSEAHSAIVILDS---RGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRR 164 ++ ++ + + + + I D+ + N E G +G++ Sbjct: 139 RSIALRDRAIESSVNGVFIADASCADYPLIYVNPAFERILGFAPGSALGRACICRDGVPG 198 Query: 165 EAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDIT 224 E + G L + G + + + I D+T Sbjct: 199 EVCNGYTDICQAISRGTEGYTVLNLERENGAQQSVELFLAPVENESGDVTHFIGVLNDVT 258 Query: 225 EERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAY 284 A++RL A+ D++TGLPNRN + D I HAI + V++LDLD FK VND+Y Sbjct: 259 ARTHAEKRLIHQASHDALTGLPNRNLLNDRITHAIARSRGRLTAVMFLDLDRFKLVNDSY 318 Query: 285 GHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRL 343 GH GD L+R+V+ + +CL +AR GGDEF+VL + S +A+++ RL Sbjct: 319 GHAVGDALIREVANRVSACLRAGDTVARLGGDEFVVLLEDLASIEDAARLAAKLRDRLSE 378 Query: 344 PFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRV 403 RIG +E+ S S+G+AL+P G D ++++AD AMY AKE GR +C + PEM+ Sbjct: 379 SVRIGSLELPLSASIGVALAPRDGRDPEMLLKNADIAMYRAKERGRNNYCFYGPEMDHHA 438 Query: 404 FEYLWLDTNLRKALENDQLVIHYQPKITW-RGEVRSLEALVRWQSPERGLIPPLDFISYA 462 L +++ LR+AL +L HYQP++ G + EALVRW+ PER L+ P +FI+ A Sbjct: 439 RRRLTVESELRRALAGGELEAHYQPQVDLATGALTGAEALVRWRHPERCLLLPGEFIAVA 498 Query: 463 EESGLIVPLGRWVILDVVRQVAKWRDKGIN-LRVAVNISARQLADQTIFTALKQVLQELN 521 EE+GLIVPLG V+ RQ +WR+ G L+VAVN+S Q + + +L E Sbjct: 499 EETGLIVPLGEQVLRAACRQSTRWREAGRPDLKVAVNLSGHQFRQHDLVEQVCDILAETG 558 Query: 522 FEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIK 581 +++E+TES + + + +++ + + G + +DDFGTGYSSLS L RFPID +K Sbjct: 559 AHAAQLELEITESVAMADADGSVATLAGLRRQGIALAIDDFGTGYSSLSYLKRFPIDTLK 618 Query: 582 LDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLF 641 +D+ F++ I ++V+AI+A+A++L L ++AEGVE+ + FL G QGFLF Sbjct: 619 IDRSFIQGIPADGDDTAIVQAIIAMARSLRLSLLAEGVETPAQREFLVAQGCRSGQGFLF 678 Query: 642 AKPMPAVAF 650 + MPA F Sbjct: 679 GRAMPAEDF 687 >UniRef50_C6NZZ7 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=2 Tax=Bacteria RepID=C6NZZ7_9PROT Length = 1152 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 193/593 (32%), Positives = 295/593 (49%), Gaps = 15/593 (2%) Query: 83 KINKREWAGNASAWHDTPAVARDLSHGLSFAEQVV----SEAHSAIVILDSRGNIQRFNR 138 + + ++ + L ++E+ A + + + + Sbjct: 555 TESDIQLIEQSARLASIAIERKRSEEALHYSEKRFRDVNDAAGEYVWEMGTDMVYTYVSN 614 Query: 139 LCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLF 198 D G +++G + + R S +++++ T G L+ Sbjct: 615 RSVDVKGYVPDELLGHTPMEFMPVEDIPHV-REIVNRAIASNTSFKLQHRDITKSGTLLW 673 Query: 199 LFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHA 258 N + L +G +IT+ +RA+E ++ LA D +T LPNR + D + HA Sbjct: 674 EEVNGVPFFDEHGELMGLRGTGMNITDRKRAEEEIKSLAFYDPLTHLPNRRLLVDRLQHA 733 Query: 259 INHADN--NKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGD 316 + + + ++++DLDNFK +ND GH GD LL+ V+L + SC+ +AR GGD Sbjct: 734 LASSTRSGREGALLFIDLDNFKTLNDTLGHDIGDLLLQQVALRLASCVREGDTVARLGGD 793 Query: 317 EFLVLASNTSQSALEAMAS------RILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDS 370 EF+V+ S+ LEA A +IL L P+ + E S S+G L Sbjct: 794 EFVVMLEELSEQTLEAAAQTESIGEKILLTLNQPYLLAAHEYRNSPSIGATLFGNKPQSI 853 Query: 371 TAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKI 430 +++ AD AMY AK+ GR F P+M + V L+ L KALENDQ ++YQ ++ Sbjct: 854 EELLKQADIAMYQAKKAGRNTLRFFDPQMQETVIARALLERELSKALENDQFQLYYQIQM 913 Query: 431 TWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKG 490 T E EAL+RW PERGLIPP FI AEE GLI+P+G WV+ Q+ W Sbjct: 914 TDLNEPFGAEALIRWIHPERGLIPPNHFIPLAEEVGLILPIGLWVLDTACNQIKIWEKNA 973 Query: 491 --INLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQ 548 L +AVN+SAR T ++ VLQ + +E+TES ++ + E + + Sbjct: 974 STRELVLAVNVSARSFFQDDFVTQIQTVLQRHAINPKRLKLEITESMMLNSIEQTIEKMN 1033 Query: 549 QFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQ 608 +LG Q +DDFGTGYSSL L R P+D +K+DQ FVRDI +++V IVA+A Sbjct: 1034 ALKKLGVQFAMDDFGTGYSSLQYLKRLPLDQLKIDQSFVRDIATDSSDKAIVTTIVAMAH 1093 Query: 609 ALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA 661 +LNL VIAEGVE+ ++ L ++G ++ QG+LF KP P FE K L++A Sbjct: 1094 SLNLDVIAEGVETEQQRQLLIESGCSQYQGYLFGKPAPIRQFEESLKPGLRQA 1146 >UniRef50_C5V4D8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4D8_9PROT Length = 1138 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 176/670 (26%), Positives = 307/670 (45%), Gaps = 22/670 (3%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 T+ + + + ++ + ++ +L + A ++ V Sbjct: 467 TITDVNERFCQISQYSREELIGKNHKMLNSGW--HPKGFFKAMYRAITRGQVWNDEVCNR 524 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 + SL + + V + ++ G + + A + + + Sbjct: 525 AKDGSLYWLDMTV-VPFMDECGKPYKYIGIRTDITERKKSAEAIERSEAKLHILFDSNSD 583 Query: 123 AIVILDSRGNIQRFNRLCEDYTGL-KEHDVIGQSVFKL----FMSRREAAASRRNNRVFF 177 A+++LD +G N+ G ++ + + ++ Sbjct: 584 AVLMLDMQG-FFDCNKAALRLFGCATTEELCKHHPADMSPATQPNGIDSLTLANEYIATA 642 Query: 178 RSGNAYEVELWIPTCK-GQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRIL 236 + E GQ G+ + + DITE ++++ + L Sbjct: 643 TRDGNAQFEWLHKRMDSGQSFPADVLLSSMKLDGRVVLQ--ATVRDITERKKSESEIVRL 700 Query: 237 ANTDSITGLPNRNAMQDLIDHAINHADNN--KVGVVYLDLDNFKKVNDAYGHLFGDQLLR 294 A D +TGLPNR + D + HA+ N ++++DLDNFK +ND GH GD LL Sbjct: 701 AFYDPLTGLPNRRLLMDRLQHALTSNLRNDKHGAILFIDLDNFKSLNDTKGHAVGDLLLV 760 Query: 295 DVSLAILSCLEHDQVLARPGGDEFLVLASNTSQ------SALEAMASRILTRLRLPFRIG 348 +V+ + C+ + +AR GGDEF+VL N S + + +A +IL L L + + Sbjct: 761 EVAQRLKGCVREEDTVARLGGDEFVVLLDNLSHGHDNAGAHTKRVAEKILQALNLSYMLQ 820 Query: 349 LIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLW 408 E ++S S+G+AL S +++ AD+AMY +K GR + + Sbjct: 821 GYEYHSSPSIGVALFCADASSPDELLKRADSAMYQSKAAGRNTVRFYDERTQALLLARAE 880 Query: 409 LDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLI 468 L+ L ALE QL+++YQ ++ + E L+RW P G+I P FI AEESG+I Sbjct: 881 LEHALHHALEQQQLMLYYQVQVNADYQPVGAEVLLRWFHPVLGMISPAQFIPLAEESGMI 940 Query: 469 VPLGRWVILDVVRQVAKWRDKGI--NLRVAVNISARQLADQTIFTALKQVLQELNFEYCP 526 +P+G WV+ Q+ +W +L +AVN+S RQ + ++ ++ + Sbjct: 941 IPIGYWVLEQACDQLKRWASDVFKCDLVLAVNVSIRQFHEADFAQKVQALVTDSGISPDR 1000 Query: 527 IDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVF 586 + +E+TES L+ + E ++ +QQ ++G +DDFGTGYSSLS + R P+D +K+DQ F Sbjct: 1001 LKLEITESMLVHDVENIIATMQQLKKIGLNFSMDDFGTGYSSLSSIKRLPLDQLKIDQSF 1060 Query: 587 VRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMP 646 VRDI +++VR I+A+AQ++ L +IAEG+E+ ++ L G QG+LF+KP+P Sbjct: 1061 VRDIGHDEHDKAIVRTIIAMAQSMKLNIIAEGIETEQQRRLLALKGCTNYQGYLFSKPVP 1120 Query: 647 AVAFERWYKR 656 FE R Sbjct: 1121 LSDFEGLLSR 1130 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 65/205 (31%), Gaps = 2/205 (0%) Query: 31 RFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWA 90 E T D +L+ + + +L +T +L + + N Sbjct: 367 FTRPIEITSEDEFGELANAFNRMSHHLDRVYQNLEQRVTERTQELEILNQQIRANLLISR 426 Query: 91 GNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHD 150 + + A ++ ++ L + + + E H+ + + D G I N + + Sbjct: 427 ESQEKLAASEAHSKRIAEELQYQKFALDE-HAIVSVTDVTGTITDVNERFCQISQYSREE 485 Query: 151 VIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSG 210 +IG++ L + R G + E+ G +L Sbjct: 486 LIGKNHKMLNSGWHPKGFFKAMYRA-ITRGQVWNDEVCNRAKDGSLYWLDMTVVPFMDEC 544 Query: 211 KNEIFLICSGTDITEERRAQERLRI 235 I TDITE +++ E + Sbjct: 545 GKPYKYIGIRTDITERKKSAEAIER 569 >UniRef50_Q5NWP7 Sensory box protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NWP7_AZOSE Length = 728 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 178/662 (26%), Positives = 297/662 (44%), Gaps = 14/662 (2%) Query: 3 TVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITS 62 R + + ++P + L +S E + + E R R + Sbjct: 50 VARFANPAMLRILGYSPDELDGVWAGDLVWSEAEDLG-----RFAEETEKRRRGESGNYE 104 Query: 63 SLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHS 122 + R ++ G+ + + L V + + Sbjct: 105 LRWRRKDGSARWSRISATARFDPDGQFDGSLIVF-QDITERKRTDEALRLWASVFANSRE 163 Query: 123 AIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNA 182 I I D G I N TG +VIGQ+ L R ++A + Sbjct: 164 GIAITDRNGIILDVNEAFVRITGYGREEVIGQNPRILQSGRHDSA-FYAGMWESLYKASN 222 Query: 183 YEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSI 242 + E+W G+ + N I D+++ + ++RL +LA D + Sbjct: 223 WCGEIWNRRKDGEIYPQWLNISAVRDEESEVSHYISVFMDLSQIKSNEKRLELLAYFDPL 282 Query: 243 TGLPNRNAMQDLIDHAINHADNNK--VGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI 300 TGL NR + D + AI + + YLDLD FK VND +GH GDQ L++++ I Sbjct: 283 TGLANRTLLADHMRMAIARSRRESTLFALGYLDLDGFKPVNDQFGHEVGDQFLQEIAKRI 342 Query: 301 LSCLEHDQVLARPGGDEFLVLASNT-SQSALEAMASRILTRLRLPFRIGLIEVYTSCSVG 359 S + D +AR GGDEF++L R+L +L P ++ + + S+G Sbjct: 343 KSVVRGDDTVARLGGDEFVILVQGLRKPEECHHTFERLLAKLEEPIQLNGHHLTATGSIG 402 Query: 360 IALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEN 419 + L P +D ++RHAD AMY AKE G+ + ++ E + V L + AL Sbjct: 403 VTLFPCDEADPDTLLRHADHAMYQAKEAGKNRIHLYDTEFDVEVRVQRELVERIEHALSE 462 Query: 420 DQLVIHYQPKITWR-GEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVP-LGRWVIL 477 + ++ YQPK+ R G V +EAL+RWQ P+RGL+PP F+ ++ L+ + +WV+ Sbjct: 463 REFLLFYQPKVDLRRGRVIGVEALIRWQDPDRGLLPPSAFLPQI-QNHLVSQKIDQWVLS 521 Query: 478 DVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQEL-NFEYCPIDVELTESCL 536 + V Q+ W G++L ++VN+S L L ++L +++E+ E+ Sbjct: 522 EAVAQLMLWHAIGLDLSISVNVSGLSLQTHDFMNTLAKLLAAHPEINRSRLEIEVLETVA 581 Query: 537 IENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVS 596 +++ E +I + G + LDDFGTGY+SL L P D +K+DQ FVRD+ Sbjct: 582 LDDIEHISGIISRRQAEGIRFALDDFGTGYASLRYLKHLPADVLKIDQSFVRDMLNDEED 641 Query: 597 QSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKR 656 + +V ++ +++A +V+AEGVE+ + L + G + QGF A+PMPA F W + Sbjct: 642 RVIVEGVIGLSRAFKREVVAEGVETLEHYLCLMELGCDFAQGFGIARPMPASEFLPWLEN 701 Query: 657 YL 658 +L Sbjct: 702 WL 703 Score = 103 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 39/138 (28%) Query: 97 HDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSV 156 ++ +V+E I++LD+ + N G ++ G Sbjct: 15 KTIQTRRIEMQADEEMYRLIVNEISDGILVLDADFVARFANPAMLRILGYSPDELDGVWA 74 Query: 157 FKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFL 216 L S E R G + EL G + + Sbjct: 75 GDLVWSEAEDLGRFAEETEKRRRGESGNYELRWRRKDGSARWSRISATARFDPDGQFDGS 134 Query: 217 ICSGTDITEERRAQERLR 234 + DITE +R E LR Sbjct: 135 LIVFQDITERKRTDEALR 152 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.198 0.763 Lambda K H 0.267 0.0606 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,166,395,726 Number of Sequences: 3077464 Number of extensions: 465277080 Number of successful extensions: 1097418 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 36666 Number of HSP's successfully gapped in prelim test: 8014 Number of HSP's that attempted gapping in prelim test: 907374 Number of HSP's gapped (non-prelim): 83089 length of query: 661 length of database: 1,040,396,356 effective HSP length: 135 effective length of query: 526 effective length of database: 624,938,716 effective search space: 328717764616 effective search space used: 328717764616 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 98 (41.8 bits)