5 c3tmiA_ Probab=100.00  E-value=1.1e-42  Score=277.69  Aligned_columns=476  Identities=13%

Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHC--------CCCEEEECCCHHHHHHHHHHHHHHC
Q ss_conf             89999678999999999865389849998168885899999999973--------9989999089899999999999975
Q batch____        10 AFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADL--------QRPTMVLAPNKTLAAQLYGEMKEFF   81 (673)
Q Consensus        10 ~~~p~~~Q~~ai~~l~~~l~~~~~~~ll~~~tGsGKT~~a~~~i~~~--------~~r~Lii~P~~~L~~Q~~~el~~~~   81 (673)
                      ||+|++||.+++++++++     +|++|+++||||||++|++++.++        ++++|||||+++|++||+++|++++
T Consensus         1 ~~~pr~yQ~e~~~~~l~g-----~n~ii~~~TGsGKT~~a~~~i~~~l~~~~~~~~~k~Lii~Pt~~L~~Q~~~~~~~~~   75 (670)
T c3tmiA_           1 PFKPRNYQLELALPAMKG-----KNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYF   75 (670)
T ss_dssp             CCCCCHHHHHTTHHHHTT-----CCEEEECCTTSCHHHHHHHHHHHHHHTSCTTCCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHCC-----CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHC
T ss_conf             978897999999999749-----989999089986589999999999972423579769998289999999999999844


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHCCCHHHHH-HCCCC
Q ss_conf             99829996366420000013555431012332037113578999999984389969998989985303867754-33751
Q batch____        82 PENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYL-KMMLH  160 (673)
Q Consensus        82 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~iii~t~~~l~~~~~~~~~~-~~~~~  160 (673)
                      +.....+..-.........                           ........+|+|+||+.+.+.+...... ...+.
T Consensus        76 ~~~~~~v~~~~g~~~~~~~---------------------------~~~~~~~~~iii~T~~~l~~~l~~~~~~~~~~~~  128 (670)
T c3tmiA_          76 ERHGYRVTGISGATAENVP---------------------------VEQIVENNDIIILTPQILVNNLKKGTIPSLSIFT  128 (670)
T ss_dssp             TTTTCCEEEECTTTCSSSC---------------------------HHHHHHTCSEEEECHHHHHHHHHTTSSCCGGGCS
T ss_pred             CCCCEEEEEEECCCCHHHH---------------------------HHHHHCCCCEEEECHHHHHHHHHCCCCCCCCCCC
T ss_conf             7687699998679766788---------------------------8874138989999878998887527545701177


Q ss_pred             EEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC----CCEEEEEECCCCCCH---------HHHHHHHHHCCCCCCC
Q ss_conf             897013377898875320681279999973333117----837986520688743---------7898863201400045
Q batch____       161 LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVR----GEVIDIFPAESDDIA---------LRVELFDEEVERLSLF  227 (673)
Q Consensus       161 l~v~De~h~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~il~~tat~~~~~~---------~~~~~~~~~~~~~~~~  227 (673)
                      ++|+||||     +......+...............    +.++++|+++.....         ............+...
T Consensus       129 ~iIiDEaH-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~t~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (670)
T c3tmiA_         129 LMIFDECH-----NTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIATV  203 (670)
T ss_dssp             EEEEETGG-----GSSSSSHHHHHHHHHHHHTTSSCCSCCCEEEEEESCCCCTTCSSHHHHHHHHHHHHHHTTCSEEECC
T ss_pred             EEEEECCH-----HCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             88850302-----2036773035789999999862157776299860667766426789998521110023343211244


Q ss_pred             CCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             60001001107311440354322472576555678899999989987410110345778999999986333100110366
Q batch____       228 DPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIE  307 (673)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (673)
                      ................................................................................
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (670)
T c3tmiA_         204 KHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENFGTQKYEQWIVTVQKACMVDKDEESRI  283 (670)
T ss_dssp             CSCHHHHHTTSCCCEEEEEECCCCSCCTHHHHHHHHHHHHHHHHHHHCSCCCCCCSHHHHHHHHHHHHGGGCCCSSCTHH
T ss_pred             CCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf             43278877631475200000001231268999999875456544311343210013445666665311100232102467


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf             56567633465546888986212344031000788899998753117988884343240101110000001788787665
Q batch____       308 NYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAP  387 (673)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (673)
                      .................+.......................................................       
T Consensus       284 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  356 (670)
T c3tmiA_         284 CKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNE-------  356 (670)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTTCCCHHHHHHHTTSSSHHHHHHSSSSCSSCC-------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC-------
T ss_conf             7676768999998665310010112046788778887642100110025776433366689888765213555-------


Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH--HHCCCEEEECCCCHHHHHHHHHH
Q ss_conf             5554420553134554111123220154322201211102345289999999862--01691684046626899998754
Q batch____       388 QTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQR--AAINERVLVTTLTKRMAEDLTEY  465 (673)
Q Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~  465 (673)
                                                               ..++..+.+.+...  ...+.++++|+.+..+++.+...
T Consensus       357 -----------------------------------------~~~~~~~~~~L~~~~~~~~~~k~iiF~~~~~~~~~l~~~  395 (670)
T c3tmiA_         357 -----------------------------------------NPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNW  395 (670)
T ss_dssp             -----------------------------------------CTTHHHHHHHHHHHHHHCTTCCEEEECSCHHHHHHHHHH
T ss_pred             -----------------------------------------CHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHH
T ss_conf             -----------------------------------------424789999999997417997159973828999999999


Q ss_pred             HHHC------------CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCHH
Q ss_conf             3210------------1111122345782220023443221012311000000234798867889983584347678999
Q batch____       466 LEEH------------GERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSER  533 (673)
Q Consensus       466 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ilv~T~~~~eGldl~~~~~Vi~~d~~~~~~~~~~~  533 (673)
                      +...            +.....+++.+....+..+...|+.+ .++|+||+++++|+|+|.|++||+||.||     ||.
T Consensus       396 L~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~r~~~~~~F~~~-~~iLiaT~v~~~GiDi~~~~~VI~~d~~~-----~~~  469 (670)
T c3tmiA_         396 IEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKAD-HNILIATSVADEGIDIAQCNLVILYEYVG-----NVI  469 (670)
T ss_dssp             HHSSTTCCSCCEEEECCSCCCSSSCCCCHHHHHHHHHTSCCC-CSCCEEEECCCSCCCCCCCSEEEEESCCC-----CHH
T ss_pred             HHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCC-CCEEEEHHHHHCCCCCCCCCEEEECCCCC-----CHH
T ss_conf             973111133441101363114311668977868889974079-94886313763368754588899739898-----999


Q ss_pred             HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             9988520011034763799837713679999998620367776
Q batch____       534 SLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQ  576 (673)
Q Consensus       534 ~~~Qr~gR~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  576 (673)
                      +++||.||+.|.|+....+............-...........
T Consensus       470 ~~~Qr~GRa~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (670)
T c3tmiA_         470 KMIQTRGRGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSI  512 (670)
T ss_dssp             HHHHHTTSSCSSCCEEEEEESSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf             9999986433149749999736613687877688876579989