37 c1s2mA_ Probab=99.95   E-value=1.6e-24  Score=166.59  Aligned_columns=329  Identities=20%

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHC------CCCEEEECCCHHHHHHHHHHHHHHCCCCE
Q ss_conf             999678999999999865389849998168885899999999973------99899990898999999999999759982
Q batch____        12 KPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADL------QRPTMVLAPNKTLAAQLYGEMKEFFPENA   85 (673)
Q Consensus        12 ~p~~~Q~~ai~~l~~~l~~~~~~~ll~~~tGsGKT~~a~~~i~~~------~~r~Lii~P~~~L~~Q~~~el~~~~~~~~   85 (673)
                      +|+|+|.+||+++.++     +++++.++||+|||++|..++.+.      +.+++|++|++.|+.||.+.++.++....
T Consensus        23 ~~~~~Q~~ai~~il~~-----~~vii~apTGsGKT~~~~l~~l~~l~~~~~~~~~iii~p~~~l~~q~~~~~~~l~~~~~   97 (377)
T c1s2mA_          23 KPSPIQEEAIPVAITG-----RDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCG   97 (377)
T ss_dssp             SCCHHHHHHHHHHHHT-----CCEEEECCTTSCHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHHHHHHHHHTTTTT
T ss_pred             CCCHHHHHHHHHHHCC-----CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCC
T ss_conf             8798999999999759-----98999927998678999999999985046882899984738987999999999731037


Q ss_pred             EEEECCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHCCCHHHHHHCCCCEEEEC
Q ss_conf             99963664200000135554310123320371135789999999843899699989899853038677543375189701
Q batch____        86 VEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGM  165 (673)
Q Consensus        86 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~iii~t~~~l~~~~~~~~~~~~~~~l~v~D  165 (673)
                      ...............                           .........+.+.++..+...............+.+.|
T Consensus        98 ~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  150 (377)
T c1s2mA_          98 ISCMVTTGGTNLRDD---------------------------ILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMD  150 (377)
T ss_dssp             CCEEEECSSSCHHHH---------------------------HHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEE
T ss_pred             CCEEEEEECCCHHHH---------------------------HHHHCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf             715999817873787---------------------------77520357502320388876432000001100022202


Q ss_pred             CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEC
Q ss_conf             33778988753206812799999733331178379865206887437898863201400045600010011073114403
Q batch____       166 IIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYP  245 (673)
Q Consensus       166 e~h~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~il~~tat~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (673)
                      +.|       ........................+..+++..................+............         
T Consensus       151 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  214 (377)
T c1s2mA_         151 EAD-------KMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELTLKGIT---------  214 (377)
T ss_dssp             SHH-------HHSSHHHHHHHHHHHTTSCSSCEEEEEESCCCHHHHHHHHHHCSSCEEESCCSSCBCTTEE---------
T ss_pred             CCE-------EECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCE---------
T ss_conf             202-------4413322102345664114575056311212200246665215665147640135655525---------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             54322472576555678899999989987410110345778999999986333100110366565676334655468889
Q batch____       246 KTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTL  325 (673)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (673)
                                                                                                      
T Consensus       215 --------------------------------------------------------------------------------  214 (377)
T c1s2mA_         215 --------------------------------------------------------------------------------  214 (377)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             86212344031000788899998753117988884343240101110000001788787665555442055313455411
Q batch____       326 FDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSG  405 (673)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (673)
                                                                                                      
T Consensus       215 --------------------------------------------------------------------------------  214 (377)
T c1s2mA_         215 --------------------------------------------------------------------------------  214 (377)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             HHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
Q ss_conf             11232201543222012111023452899999998620169168404662689999875432101111122345782220
Q batch____       406 GDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVER  485 (673)
Q Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (673)
                                       ...........................++++.......................++......+
T Consensus       215 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (377)
T c1s2mA_         215 -----------------QYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQER  277 (377)
T ss_dssp             -----------------EEEEECCGGGHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHH
T ss_pred             -----------------EEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
T ss_conf             -----------------999970603556788742001345226886230112467787542101332222456420121


Q ss_pred             HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEE-EEECCCHHHHHHH
Q ss_conf             023443221012311000000234798867889983584347678999998852001103476379-9837713679999
Q batch____       486 MEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAI-LYGDKITPSMAKA  564 (673)
Q Consensus       486 ~~~~~~f~~~~~~ilv~T~~~~eGldl~~~~~Vi~~d~~~~~~~~~~~~~~Qr~gR~~R~~~~~~~-~~~~~~~~~~~~~  564 (673)
                      ......|..+...++++|+++++|+|+|++++||+|+.|+     ++..+.||.||++|.|+.-.. +++..........
T Consensus       278 ~~~~~~~~~~~~~vlv~T~~~~~GiDip~v~~VI~~~~p~-----s~~~~~Qr~GRagR~g~~g~~i~~~~~~d~~~~~~  352 (377)
T c1s2mA_         278 NKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPK-----TAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYK  352 (377)
T ss_dssp             HHHHHHHHTTSSSEEEESSCSSSSCCCTTEEEEEESSCCS-----SHHHHHHHHCBSSCTTCCEEEEEEECGGGHHHHHH
T ss_pred             HCCCCCCCCCCEEEEEECCCHHCCCCCCCCCEEEECCCCC-----CHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHH
T ss_conf             0000001122113431023011235646763899808887-----99899886210236888259999878889999999


Q ss_pred             HHHHHH
Q ss_conf             998620
Q batch____       565 IGETER  570 (673)
Q Consensus       565 ~~~~~~  570 (673)
                      +.+..+
T Consensus       353 i~~~l~  358 (377)
T c1s2mA_         353 IEQELG  358 (377)
T ss_dssp             HHHHHT
T ss_pred             HHHHHC
T ss_conf             999938