| 1 | c2iifA_ |
|
 |
99.9 |
37 |
PDB header:recombination/dna Chain: A: PDB Molecule:integration host factor;
PDBTitle: single chain integration host factor mutant protein (scihf2-2 k45ae) in complex with dna
|
| 2 | d1p71a_ |
|
 |
99.9 |
47 |
Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein |
| 3 | c3c4iA_ |
|
 |
99.9 |
42 |
PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding protein hu homolog;
PDBTitle: crystal structure analysis of n terminal region containing the2 dimerization domain and dna binding domain of hu protein(histone like3 protein-dna binding) from mycobacterium tuberculosis [h37rv]
|
| 4 | d1owfa_ |
|
 |
99.9 |
37 |
Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein |
| 5 | d1owfb_ |
|
 |
99.9 |
34 |
Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein |
| 6 | c2np2B_ |
|
 |
99.9 |
32 |
PDB header:dna binding protein/dna Chain: B: PDB Molecule:hbb;
PDBTitle: hbb-dna complex
|
| 7 | d1exea_ |
|
 |
99.9 |
39 |
Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein |
| 8 | d1huua_ |
|
 |
99.8 |
58 |
Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein |
| 9 | d1mula_ |
|
 |
99.8 |
95 |
Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein |
| 10 | d2o97b1 |
|
 |
99.6 |
70 |
Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein |
| 11 | d1b8za_ |
|
 |
99.6 |
54 |
Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein |
| 12 | c2yskA_ |
|
 |
42.6 |
22 |
PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ttha1432;
PDBTitle: crystal structure of a hypothetical protein ttha1432 from thermus2 thermophilus
|
| 13 | d1o17a1 |
|
 |
42.5 |
17 |
Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| 14 | d1brwa1 |
|
 |
41.2 |
17 |
Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| 15 | d1dula_ |
|
 |
41.0 |
10 |
Fold:Signal peptide-binding domain Superfamily:Signal peptide-binding domain Family:Signal peptide-binding domain |
| 16 | d1z67a1 |
|
 |
30.8 |
21 |
Fold:YidB-like Superfamily:YidB-like Family:YidB-like |
| 17 | d1nria_ |
|
 |
29.2 |
16 |
Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain |
| 18 | c1nriA_ |
|
 |
29.2 |
16 |
PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein hi0754;
PDBTitle: crystal structure of putative phosphosugar isomerase hi0754 from2 haemophilus influenzae
|
| 19 | d1khda1 |
|
 |
28.9 |
0 |
Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| 20 | d2tpta1 |
|
 |
28.7 |
10 |
Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| 21 | c3mzyA_ |
|
not modelled |
26.7 |
14 |
PDB header:rna binding protein Chain: A: PDB Molecule:rna polymerase sigma-h factor;
PDBTitle: the crystal structure of the rna polymerase sigma-h factor from2 fusobacterium nucleatum to 2.5a
|
| 22 | c3cvjB_ |
|
not modelled |
26.6 |
13 |
PDB header:isomerase Chain: B: PDB Molecule:putative phosphoheptose isomerase;
PDBTitle: crystal structure of a putative phosphoheptose isomerase (bh3325) from2 bacillus halodurans c-125 at 2.00 a resolution
|
| 23 | d1i27a_ |
|
not modelled |
25.7 |
25 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal domain of the rap74 subunit of TFIIF |
| 24 | d1z6ra1 |
|
not modelled |
25.5 |
14 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ROK associated domain |
| 25 | c1o17A_ |
|
not modelled |
24.6 |
17 |
PDB header:transferase Chain: A: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: anthranilate phosphoribosyl-transferase (trpd)
|
| 26 | d2cp9a1 |
|
not modelled |
24.5 |
19 |
Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain |
| 27 | d1aipc1 |
|
not modelled |
23.8 |
27 |
Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain |
| 28 | c2krcA_ |
|
not modelled |
22.8 |
14 |
PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit delta;
PDBTitle: solution structure of the n-terminal domain of bacillus2 subtilis delta subunit of rna polymerase
|
| 29 | d1uoua1 |
|
not modelled |
21.7 |
15 |
Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| 30 | d2o4ta1 |
|
not modelled |
21.7 |
13 |
Fold:Left-handed superhelix Superfamily:BH3980-like Family:BH3980-like |
| 31 | d1nh2d1 |
|
not modelled |
21.0 |
21 |
Fold:Transcription factor IIA (TFIIA), alpha-helical domain Superfamily:Transcription factor IIA (TFIIA), alpha-helical domain Family:Transcription factor IIA (TFIIA), alpha-helical domain |
| 32 | c2v79B_ |
|
not modelled |
20.8 |
13 |
PDB header:dna-binding protein Chain: B: PDB Molecule:dna replication protein dnad;
PDBTitle: crystal structure of the n-terminal domain of dnad from2 bacillus subtilis
|
| 33 | c2vn2B_ |
|
not modelled |
20.4 |
17 |
PDB header:replication Chain: B: PDB Molecule:chromosome replication initiation protein;
PDBTitle: crystal structure of the n-terminal domain of dnad protein2 from geobacillus kaustophilus hta426
|
| 34 | d1xb2b1 |
|
not modelled |
19.9 |
21 |
Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain |
| 35 | c3tsuA_ |
|
not modelled |
18.6 |
37 |
PDB header:transferase Chain: A: PDB Molecule:transcriptional regulatory protein;
PDBTitle: crystal structure of e. coli hypf with amp-pnp and carbamoyl phosphate
|
| 36 | d1hq1a_ |
|
not modelled |
18.4 |
12 |
Fold:Signal peptide-binding domain Superfamily:Signal peptide-binding domain Family:Signal peptide-binding domain |
| 37 | d1ee8a1 |
|
not modelled |
17.4 |
14 |
Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Middle domain of MutM-like DNA repair proteins |
| 38 | d1tdza1 |
|
not modelled |
16.6 |
14 |
Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Middle domain of MutM-like DNA repair proteins |
| 39 | c1otpA_ |
|
not modelled |
16.5 |
10 |
PDB header:phosphorylase Chain: A: PDB Molecule:thymidine phosphorylase;
PDBTitle: structural and theoretical studies suggest domain movement produces an2 active conformation of thymidine phosphorylase
|
| 40 | d1qzxa2 |
|
not modelled |
16.5 |
27 |
Fold:Signal peptide-binding domain Superfamily:Signal peptide-binding domain Family:Signal peptide-binding domain |
| 41 | d1k82a1 |
|
not modelled |
16.0 |
18 |
Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Middle domain of MutM-like DNA repair proteins |
| 42 | d1vola2 |
|
not modelled |
15.8 |
17 |
Fold:Cyclin-like Superfamily:Cyclin-like Family:Transcription factor IIB (TFIIB), core domain |
| 43 | d1ussa_ |
|
not modelled |
15.5 |
17 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Linker histone H1/H5 |
| 44 | d1qb2a_ |
|
not modelled |
14.9 |
16 |
Fold:Signal peptide-binding domain Superfamily:Signal peptide-binding domain Family:Signal peptide-binding domain |
| 45 | c3g2bA_ |
|
not modelled |
14.8 |
6 |
PDB header:biosynthetic protein Chain: A: PDB Molecule:coenzyme pqq synthesis protein d;
PDBTitle: crystal structure of pqqd from xanthomonas campestris
|
| 46 | d2ffha2 |
|
not modelled |
14.7 |
12 |
Fold:Signal peptide-binding domain Superfamily:Signal peptide-binding domain Family:Signal peptide-binding domain |
| 47 | c2jqeA_ |
|
not modelled |
14.3 |
24 |
PDB header:signaling protein Chain: A: PDB Molecule:signal recognition 54 kda protein;
PDBTitle: soution structure of af54 m-domain
|
| 48 | c1khdD_ |
|
not modelled |
14.2 |
0 |
PDB header:transferase Chain: D: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: crystal structure analysis of the anthranilate2 phosphoribosyltransferase from erwinia carotovora at 1.93 resolution (current name, pectobacterium carotovorum)
|
| 49 | d1r2za1 |
|
not modelled |
13.9 |
29 |
Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Middle domain of MutM-like DNA repair proteins |
| 50 | c1l0oC_ |
|
not modelled |
13.6 |
24 |
PDB header:protein binding Chain: C: PDB Molecule:sigma factor;
PDBTitle: crystal structure of the bacillus stearothermophilus anti-2 sigma factor spoiiab with the sporulation sigma factor3 sigmaf
|
| 51 | d1l0oc_ |
|
not modelled |
13.6 |
24 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain |
| 52 | d1g8ia_ |
|
not modelled |
13.6 |
7 |
Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like |
| 53 | d1k3xa1 |
|
not modelled |
13.4 |
19 |
Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Middle domain of MutM-like DNA repair proteins |
| 54 | c3bwgA_ |
|
not modelled |
13.2 |
31 |
PDB header:transcription regulator Chain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator yydk;
PDBTitle: the crystal structure of possible transcriptional regulator yydk from2 bacillus subtilis subsp. subtilis str. 168
|
| 55 | c1tr8A_ |
|
not modelled |
13.0 |
21 |
PDB header:chaperone Chain: A: PDB Molecule:conserved protein (mth177);
PDBTitle: crystal structure of archaeal nascent polypeptide-associated complex2 (aenac)
|
| 56 | d1njra_ |
|
not modelled |
11.9 |
21 |
Fold:Macro domain-like Superfamily:Macro domain-like Family:Macro domain |
| 57 | c1vquB_ |
|
not modelled |
11.4 |
21 |
PDB header:transferase Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase 2;
PDBTitle: crystal structure of anthranilate phosphoribosyltransferase 22 (17130499) from nostoc sp. at 1.85 a resolution
|
| 58 | d1nvpd1 |
|
not modelled |
11.1 |
17 |
Fold:Transcription factor IIA (TFIIA), alpha-helical domain Superfamily:Transcription factor IIA (TFIIA), alpha-helical domain Family:Transcription factor IIA (TFIIA), alpha-helical domain |
| 59 | d1uxda_ |
|
not modelled |
11.1 |
35 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
| 60 | d1smyf2 |
|
not modelled |
11.0 |
3 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Sigma3 and sigma4 domains of RNA polymerase sigma factors Family:Sigma4 domain |
| 61 | d1z05a1 |
|
not modelled |
11.0 |
9 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ROK associated domain |
| 62 | c3a4cA_ |
|
not modelled |
10.4 |
11 |
PDB header:cell cycle, replication Chain: A: PDB Molecule:dna replication factor cdt1;
PDBTitle: crystal structure of cdt1 c terminal domain
|
| 63 | d1efub3 |
|
not modelled |
10.2 |
21 |
Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain |
| 64 | d1v8ga1 |
|
not modelled |
10.2 |
12 |
Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| 65 | c2kloA_ |
|
not modelled |
10.0 |
11 |
PDB header:cell cycle Chain: A: PDB Molecule:dna replication factor cdt1;
PDBTitle: structure of the cdt1 c-terminal domain
|
| 66 | c1brwB_ |
|
not modelled |
10.0 |
17 |
PDB header:transferase Chain: B: PDB Molecule:protein (pyrimidine nucleoside phosphorylase);
PDBTitle: the crystal structure of pyrimidine nucleoside2 phosphorylase in a closed conformation
|
| 67 | d1mkma1 |
|
not modelled |
9.9 |
25 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Transcriptional regulator IclR, N-terminal domain |
| 68 | c2l8nA_ |
|
not modelled |
9.8 |
30 |
PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional repressor cytr;
PDBTitle: nmr structure of the cytidine repressor dna binding domain in presence2 of operator half-site dna
|
| 69 | c2dsjA_ |
|
not modelled |
9.8 |
23 |
PDB header:transferase Chain: A: PDB Molecule:pyrimidine-nucleoside (thymidine) phosphorylase;
PDBTitle: crystal structure of project id tt0128 from thermus thermophilus hb8
|
| 70 | d2elca1 |
|
not modelled |
9.6 |
12 |
Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| 71 | d1uxca_ |
|
not modelled |
9.6 |
35 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
| 72 | d1aisb2 |
|
not modelled |
9.6 |
22 |
Fold:Cyclin-like Superfamily:Cyclin-like Family:Transcription factor IIB (TFIIB), core domain |
| 73 | c1aipG_ |
|
not modelled |
9.5 |
27 |
PDB header:complex of two elongation factors Chain: G: PDB Molecule:elongation factor ts;
PDBTitle: ef-tu ef-ts complex from thermus thermophilus
|
| 74 | d2bjca1 |
|
not modelled |
9.4 |
20 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
| 75 | c2v3cC_ |
|
not modelled |
9.4 |
19 |
PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein;
PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii
|
| 76 | c3edpB_ |
|
not modelled |
9.2 |
28 |
PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lin2111 protein;
PDBTitle: the crystal structure of the protein lin2111 (functionally unknown)2 from listeria innocua clip11262
|
| 77 | c2kjwA_ |
|
not modelled |
8.8 |
14 |
PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s6;
PDBTitle: solution structure and backbone dynamics of the permutant2 p54-55
|
| 78 | d1qpza1 |
|
not modelled |
8.8 |
25 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
| 79 | c2lcvA_ |
|
not modelled |
8.6 |
30 |
PDB header:transcription regulator Chain: A: PDB Molecule:hth-type transcriptional repressor cytr;
PDBTitle: structure of the cytidine repressor dna-binding domain; an alternate2 calculation
|
| 80 | d2j5aa1 |
|
not modelled |
8.4 |
26 |
Fold:Ferredoxin-like Superfamily:Ribosomal protein S6 Family:Ribosomal protein S6 |
| 81 | c3thgA_ |
|
not modelled |
8.4 |
7 |
PDB header:protein binding Chain: A: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase activase 1,
PDBTitle: crystal structure of the creosote rubisco activase c-domain
|
| 82 | c3kfoA_ |
|
not modelled |
8.3 |
14 |
PDB header:protein transport Chain: A: PDB Molecule:nucleoporin nup133;
PDBTitle: crystal structure of the c-terminal domain from the nuclear pore2 complex component nup133 from saccharomyces cerevisiae
|
| 83 | d1x92a_ |
|
not modelled |
8.3 |
16 |
Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain |
| 84 | d1tk9a_ |
|
not modelled |
8.1 |
20 |
Fold:SIS domain Superfamily:SIS domain Family:mono-SIS domain |
| 85 | d2hsga1 |
|
not modelled |
8.0 |
20 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
| 86 | d1lcda_ |
|
not modelled |
8.0 |
20 |
Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:GalR/LacI-like bacterial regulator |
| 87 | d1qjha_ |
|
not modelled |
7.7 |
14 |
Fold:Ferredoxin-like Superfamily:Ribosomal protein S6 Family:Ribosomal protein S6 |
| 88 | c3r3tA_ |
|
not modelled |
7.6 |
15 |
PDB header:rna binding protein Chain: A: PDB Molecule:30s ribosomal protein s6;
PDBTitle: crystal structure of 30s ribosomal protein s from bacillus anthracis
|
| 89 | d2fq4a1 |
|
not modelled |
7.3 |
25 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain |
| 90 | d2i10a1 |
|
not modelled |
7.1 |
16 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain |
| 91 | d1u5ta1 |
|
not modelled |
7.0 |
12 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain |
| 92 | d1vr3a1 |
|
not modelled |
7.0 |
23 |
Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Acireductone dioxygenase |
| 93 | c1dpuA_ |
|
not modelled |
6.8 |
12 |
PDB header:dna binding protein Chain: A: PDB Molecule:replication protein a (rpa32) c-terminal domain;
PDBTitle: solution structure of the c-terminal domain of human rpa322 complexed with ung2(73-88)
|
| 94 | d1dpua_ |
|
not modelled |
6.8 |
12 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal domain of RPA32 |
| 95 | c2bpqB_ |
|
not modelled |
6.8 |
19 |
PDB header:transferase Chain: B: PDB Molecule:anthranilate phosphoribosyltransferase;
PDBTitle: anthranilate phosphoribosyltransferase (trpd) from2 mycobacterium tuberculosis (apo structure)
|
| 96 | c1xb2B_ |
|
not modelled |
6.7 |
29 |
PDB header:translation Chain: B: PDB Molecule:elongation factor ts, mitochondrial;
PDBTitle: crystal structure of bos taurus mitochondrial elongation2 factor tu/ts complex
|
| 97 | c2kz3A_ |
|
not modelled |
6.5 |
26 |
PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein rad51l3;
PDBTitle: backbone 1h, 13c, and 15n chemical shift assignments for human rad51d2 from 1 to 83
|
| 98 | d1x2na1 |
|
not modelled |
6.5 |
17 |
Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain |
| 99 | c1rp3G_ |
|
not modelled |
6.4 |
18 |
PDB header:transcription Chain: G: PDB Molecule:rna polymerase sigma factor sigma-28 (flia);
PDBTitle: cocrystal structure of the flagellar sigma/anti-sigma2 complex, sigma-28/flgm
|