Phyre 2 alignment of P39365 with d1xs5a_

Return to main results | Retrieve Phyre Job Id

Job Description | P39365
Confidence | 5.51% | Date | Thu Jan 5 11:59:56 GMT 2012
Rank | 79 | Aligned Residues | 33
% Identity | 18% | Template | d1xs5a_
SCOP info | Periplasmic binding protein-like II | Periplasmic binding protein-like II | Phosphate binding protein-like
Resolution | 1.85

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 257 | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | R | M | I | R | L | I | V | E | G | L | L | P | I | S | D | G | A | R | K | F | F | Q | K | Y | F | K | G | R | E | V | Y | I | G | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | A | R | V | Q | A | V | L | R | A | L | C | G | . | . | G | R | V | R | T | Y | L | K | E | R | Y | K | G | G | E | V | A | P | A | M
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | T | S | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 213 | . | . | . | . | . | . | 220 | . | . | . | . | . |  |  | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions