 |
| Job Description | P39365 | | Confidence | 5.29% | Date | Thu Jan 5 11:59:56 GMT 2012 |
| Rank | 85 | Aligned Residues | 27 |
| % Identity | 15% | Template | d1vkpa_ |
| SCOP info | Pentein, beta/alpha-propeller
| Pentein
| Porphyromonas-type peptidylarginine deiminase
|
| Resolution | 1.53 |
|
|   |   |
272 | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | |
. | |
. | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
| . |  | . |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
| Query Sequence |   |
D | G | A | R | K | F | F | Q | K | Y | F | K | G | R | E | V | Y | I | G | L | D | . |
T | . |
A | V | T | L | G | H |
| Query Conservation |   |
  |
|
|   |   |
|   |   |
|
|
|   |
|
|   |   |   |
|
|
|
| . |   | . |
|   |   |   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
| . |
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|
|   |
|   | . |
|
|   |
|
|   |   |   |   |
|   |   |   |
|
| Template Sequence |   |
K | E | A | I | R | V | L | S | D | T | F | P | H | H | S | . |
V | V | G | I | E | N | A | R | E | I | V | L | A | G |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| T | T | S |  | . |  |  |  |  | T | T | T |  |  |  |  | T | T | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
333 | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | |
. | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|