Phyre 2 alignment of P39365 with d1jb0k_

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Job Description | P39365
Confidence | 4.85% | Date | Thu Jan 5 11:59:56 GMT 2012
Rank | 94 | Aligned Residues | 27
% Identity | 30% | Template | d1jb0k_
SCOP info | Photosystem I reaction center subunit X, PsaK | Photosystem I reaction center subunit X, PsaK | Photosystem I reaction center subunit X, PsaK
Resolution | 2.50

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | S | D | G | A | R | K | F | F | Q | K | Y | F | K | G | R | E | V | Y | I | G | L | D | T | A | V | T | L | G | H | P | T | T | I | A | V | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Sequence |  | F | A | I | A | L | G | R | Y | I | Q | S | R | G | K | G | P | G | L | . | . | . | . | . | . | . | . | . | . | G | L | P | E | L | L | A | T | T
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  | S |  |  | . | . | . | . | . | . | . | . | . | . |  |  | T | T | G | G | G |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | 50 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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