Phyre 2 alignment of P39365 with d1ftra1

Return to main results | Retrieve Phyre Job Id

Job Description | P39365
Confidence | 8.57% | Date | Thu Jan 5 11:59:56 GMT 2012
Rank | 54 | Aligned Residues | 25
% Identity | 16% | Template | d1ftra1
SCOP info | Ferredoxin-like | Formylmethanofuran:tetrahydromethanopterin formyltransferase | Formylmethanofuran:tetrahydromethanopterin formyltransferase
Resolution | 1.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | Y | E | K | I | P | F | M | K | G | R | N | I | D | A | Q | E | I | Q | K | R | Y | G | M | V | G | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | F | D | A | M | P | E | A | E | K | . | . | E | D | E | D | R | V | G | Y | K | L | S | F | F | G | D
Template Known Secondary structure |  |  |  |  |  |  |  | G | G | G |  | . | . |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 105 | . | . | . | . | 110 | . | . | . | . |  |  | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions