67 d1pama4 Probab=100.00  E-value=0  Score=462.22  Aligned_columns=346  Identities=16%

Q ss_pred             CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC-----------------CCHHHHHHHHHH--HHHHCCCCEEEECCCCC
Q ss_conf             44777887558647998510334326887744-----------------679999998989--99975998999915514
Q batch____       231 EERKKANQFDAPISIYEVHLGSWRRHTDNNFW-----------------LSYRELADQLVP--YAKWMGFTHLELLPINE  291 (728)
Q Consensus       231 ~~~~~~~~~~~~~~IYE~Hv~~f~~~~~~~~~-----------------gty~~~~~~li~--YLkeLGvt~I~LmPi~e  291 (728)
                      +.....+...+..||||||+++|....+.+..                 |+|++++++| |  |||+||||+||||||++
T Consensus         3 ~~~~~~~~w~~~~viY~i~~~~F~~~d~~~~~~~~~~~~~~~~~~~~~gGd~~gi~~kL-D~~YLk~LGv~~I~L~Pi~~   81 (406)
T d1pama4           3 DTSVSNKQNFSTDVIYQIFTDRFSDGNPANNPTGAAFDGSCTNLRLYCGGDWQGIINKI-NDGYLTGMGITAIWISQPVE   81 (406)
T ss_dssp             TTSTTCCSCCTTCCEEECCGGGTCCSCGGGCCCGGGBCTTCCSTTSBCCCCHHHHHHHH-HTTTTGGGTCCEEEECCCEE
T ss_pred             CCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC-CHHHHHHCCCCEEEECCCCC
T ss_conf             88888833530282899821113577867676666666676665564688689999744-98889962998999877634


Q ss_pred             CC----------CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCC
Q ss_conf             88----------88886766640146175678999999999999998988999726564678773552179863335567
Q batch____       292 HP----------FDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSD  361 (728)
Q Consensus       292 ~p----------~~~~wGYd~~~y~a~~~~yGt~~dfk~LVd~aH~~GI~VIlDvV~NH~~~~~~~~~~~dg~~~y~~~~  361 (728)
                      ++          ...+|||+|++|++|+++|||++|||+||++||++||+||||+|+||++.++.++..+.....+....
T Consensus        82 ~~~~~~~~~~~~~~~~~GY~~~d~~~id~~~Gt~~dfk~Lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~  161 (406)
T d1pama4          82 NIYSVINYSGVNNTAYHGYWARDFKKTNPAYGTMQDFKNLIDTAHAHNIKVIIDFAPNHTSPASSDDPSFAENGRLYDNG  161 (406)
T ss_dssp             ECCCCEEETTEEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSCTTSTTTTCEEETT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCCCC
T ss_conf             65544455666767777746574543373438999999999999878989999760452468763210000246555676


Q ss_pred             CCCCCC-------------------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCC
Q ss_conf             677646-------------------------7888611268899999999999999998729989997666641443444
Q batch____       362 PREGYH-------------------------QDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYS  416 (728)
Q Consensus       362 ~~~~~~-------------------------~~wg~~~~n~~~~~Vr~~l~d~~~yWi~eygVDGfR~Dav~~m~~~~~~  416 (728)
                      ......                         ...++++||+++|+|+++|+++++||+ ++||||||+|++.++      
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~p~v~~~~~~~~~~w~-e~giDGfR~D~~~~~------  234 (406)
T d1pama4         162 NLLGGYTNDTQNLFHHYGGTDFSTIENGIYKNLYDLADLNHNNSSVDVYLKDAIKMWL-DLGVDGIRVDAVKHM------  234 (406)
T ss_dssp             EEEECSTTCTTCCBCCSCBCCCSSHHHHHHSBSTTEEEBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGS------
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCHHHC------
T ss_conf             6466677666673466677777776762006855354315898899999999999998-449978887575658------


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCC-CCCCCCCCCEECHHHHHHHHHHHHC
Q ss_conf             555444444457656531689999999998775697799960158866652112-2578772102183899999998613
Q batch____       417 RKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQ-DMGGLGFWYKWNLGWMHDTLDYMKL  495 (728)
Q Consensus       417 ~~~~~~~~~~~g~~~~~~~~~fl~~~~~~v~~~~p~~~liaE~~~~~~~~~~~~-~~gg~gfd~~~n~~~~~~~~~~~~~  495 (728)
                                        ...+++++++.+++ .+..++++|.+.......... .....+++..+++.+++.+..++..
T Consensus       235 ------------------~~~~~~~~~~~~~~-~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (406)
T d1pama4         235 ------------------PFGWQKSFMATINN-YKPVFTFGEWFLGVNEISPEYHQFANESGMSLLDFRFAQKARQVFRD  295 (406)
T ss_dssp             ------------------CHHHHHHHHHHHHH-HSCCEEEECCCCCTTCCCHHHHHHHHHSSSEEBCHHHHHHHHHHHTT
T ss_pred             ------------------CHHHHHHHHHHHHH-CCCEEEEEEECCCCHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHC
T ss_conf             ------------------98999999999851-59639998311675245346652366677122071799999999708


Q ss_pred             CCCHHHHHHHHHHHCCCC--CCCCCEEEECCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
Q ss_conf             831023444333210146--810217840577641247420003468997899999999999999829924998530203
Q batch____       496 DPVYRQYHHDKLTFGILY--NYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFA  573 (728)
Q Consensus       496 ~~~~~~~~~~~~t~~~~~--~~~~~~~~~~sHD~~~~~~~~~~~~~~~~~~~~~~~~rla~a~~lt~pG~P~i~~G~E~G  573 (728)
                      .........+.+......  .....+++++|||+.+......          ..+++|++++++||+||+||||||+|+|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~nHD~~R~~~~~~----------~~~~~~~a~~~~~~~pG~P~iy~G~E~g  365 (406)
T d1pama4         296 NTDNMYGLKAMLEGSEVDYAQVNDQVTFIDNHDMERFHTSNG----------DRRKLEQALAFTLTSRGVPAIYYGSEQY  365 (406)
T ss_dssp             CSSCHHHHHHHHHHHHHHSTTGGGCEECSCCTTSCCSCCTTS----------CHHHHHHHHHHHHHSSSEEEEETTGGGT
T ss_pred             CCCCHHHHHHHHHHHHHHCCCHHHCEEECCCCCCCHHHHHCC----------CHHHHHHHHHHHHHHCCCEEEECCHHCC
T ss_conf             887789999998523431567021043167876223543058----------2899999999999828971987671015


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHH
Q ss_conf             46899975634800013556430689999999999988787654
Q batch____       574 QGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMH  617 (728)
Q Consensus       574 ~~~~~~~~~~~dW~~~~~~~~~~~~l~~~~k~Li~lRk~~paL~  617 (728)
                      +++..++.++.+|.    ....++++++++|+|++||+++|||+
T Consensus       366 ~~g~~d~~~r~~~~----~~~~~~~~~~~~~~L~~lR~~~paL~  405 (406)
T d1pama4         366 MSGGNDPDNRARLP----SFSTTTTAYQVIQKLAPLRKSNPAIA  405 (406)
T ss_dssp             CCCCSTTGGGCCCC----CCCSCSHHHHHHHHHTTHHHHCHHHH
T ss_pred             CCCCCCHHHCCCCC----CCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             07885632245478----87564189999999999998762135