137 c3civA_ Probab=98.01   E-value=0.00067  Score=44.85  Aligned_columns=168  Identities=16%

Q ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH-----HHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf             9999898999975998999915514888888676664014617567899-----99999999999989889997265646
Q batch____       267 ELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTR-----DDFRYFIDAAHAAGLNVILDWVPGHF  341 (728)
Q Consensus       267 ~~~~~li~YLkeLGvt~I~LmPi~e~p~~~~wGYd~~~y~a~~~~yGt~-----~dfk~LVd~aH~~GI~VIlDvV~NH~  341 (728)
                      ..+++-++.||++|+|+|=|          ...+....+..+...||+.     +.++.+|+.|+++||+||+|+-..-.
T Consensus        26 ~~~~~~l~~l~~~G~N~vRi----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~A~~~Gl~Vil~~h~~~~   95 (316)
T c3civA_          26 DEARASMRALAEQPFNWVTL----------AFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCR   95 (316)
T ss_dssp             HHHHHHHHHHHHSSCSEEEE----------EEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEET
T ss_pred             HHHHHHHHHHHHCCCCEEEE----------ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf             68999999999839989998----------23247777677654447677679789999999998689879997235888


Q ss_pred             CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCCC
Q ss_conf             78773552179863335567677646788861126889999999999999999872998999766664144344455544
Q batch____       342 PTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGE  421 (728)
Q Consensus       342 ~~~~~~~~~~dg~~~y~~~~~~~~~~~~wg~~~~n~~~~~Vr~~l~d~~~yWi~eygVDGfR~Dav~~m~~~~~~~~~~~  421 (728)
                      +....+-..+..             ...+.....+.-...++++....+.. ..+.+++-+=+-                
T Consensus        96 ~~~w~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~~~nE~~~~g----------------  145 (316)
T c3civA_          96 DGTWRGEIRFEK-------------EHGPDLESWEAWFGSYSDMMAHYAHV-AKRTGCEMFCVG----------------  145 (316)
T ss_dssp             TCCCGGGCCCSB-------------SCCTTSSBHHHHHHHHHHHHHHHHHH-HHHTTCSEEEEE----------------
T ss_pred             CCCCCCCCCCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHH-HHHCCCCEEECC----------------
T ss_conf             876555667678-------------60125576999999999999879999-874199858506----------------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCC
Q ss_conf             4444457656531689999999998775697799960158866652112257877210
Q batch____       422 WIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWY  479 (728)
Q Consensus       422 ~~~~~~g~~~~~~~~~fl~~~~~~v~~~~p~~~liaE~~~~~~~~~~~~~~gg~gfd~  479 (728)
                           ...........+++++.+.+++.+|+.++....+..+............++++
T Consensus       146 -----ne~~~~~~~~~~~~~~~~~ir~~dp~~~~~~~~~~~~~~~~~~~~~D~ig~~~  198 (316)
T c3civA_         146 -----CEMTTAEPHEAMWRETIARVRTEYDGLVTYNCNHGREEHVRFWDAVDLISSSA  198 (316)
T ss_dssp             -----ESCTTTTTCHHHHHHHHHHHHHHCCSEEEEEEETTCTTTCSCGGGSSEEEEEC
T ss_pred             -----CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEC
T ss_conf             -----77776001467899999999974699779944688633345333457676314