114 c3mi6A_ Probab=99.12   E-value=1.3e-06  Score=63.39  Aligned_columns=464  Identities=17%

Q ss_pred             ECCCCCCCCCCEEECCCCCEEEEEECCCCCCCE--------EEEEEECCCCCEEECCCCCEEEEECCCCCCEEEECCCCC
Q ss_conf             317897542110364789789998078899875--------999998479988871687427852388743288337776
Q batch____       155 QFNYWDGRRHPMRLRKESGIWELFIPGAHNGQL--------YKYEMIDANGNLRLKSDPYAFEAQMRPETASLICGLPEK  226 (728)
Q Consensus       155 dfn~w~~~~~~m~~~~~~Gvw~~~i~~~~~g~~--------Y~y~i~~~~g~~~~~~DPya~~~~~~~~~~svv~~~~~~  226 (728)
                      .++.-.+..+-+....+ |=|.+.+..+..|..        +.+...-.-|++....--+..+....-...|.......-
T Consensus       238 ~~~e~~G~v~g~~l~~S-Gn~~~~ve~~~~~~~r~~~G~~~~~~~~~L~pGesf~TP~~~~~~s~~gl~~~s~~~h~~~r  316 (742)
T c3mi6A_         238 QTTDEQGAVFGFNLVYS-GNFLDAIEVDQYSTSRILTGINPDEFGWNLAPQATFQTPEAILSYTSAGXNQLSQQXASFYQ  316 (742)
T ss_dssp             TCCSSSBCEEEEEESCC-SSEEEEEEECTTSCEEEEEEECSTTCCEEECTTCEEECCCEEEEEESBCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEEEEEC-CCEEEEEEECCCCCEEEEEECCCCCCCEEECCCCEEEEEEEEEEEECCCHHHHHHHHHHHHH
T ss_conf             77866662789999963-82489999878983799962066678378279984874048999965865688887999999


Q ss_pred             CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCC--CCCCCCCCCCCCC
Q ss_conf             44444477788755864799851033432688774467999999898999975998999915514--8888886766640
Q batch____       227 VVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINE--HPFDGSWGYQPTG  304 (728)
Q Consensus       227 ~~w~~~~~~~~~~~~~~~IYE~Hv~~f~~~~~~~~~gty~~~~~~li~YLkeLGvt~I~LmPi~e--~p~~~~wGYd~~~  304 (728)
                      .......+...+++--.+=||..-.+++.+.           ..++++-.+++|+   |+.=+=+  |....+|-=..-+
T Consensus       317 ~~~~~~~~~~~~rPV~~NsWea~yfd~~~~~-----------l~~la~~Aa~lG~---E~fVlDDGWf~~r~dd~~~LGD  382 (742)
T c3mi6A_         317 QHLVNPRFAHEERPVLINNWEATYFDFNEAK-----------LXTIVNQAKRLGI---EXFVLDDGWFGHRDDDTTSLGD  382 (742)
T ss_dssp             HHTSCTTTTTSCCCCEEECHHHHTTCCCHHH-----------HHHHHHHHHHHTC---CEEEECTTCBTTCSSTTSCTTC
T ss_pred             HHCCCCCCCCCCCCEEEECCCCEEECCCHHH-----------HHHHHHHHHHCCC---CEEEECCCCCCCCCCCCCCCCC
T ss_conf             6315776544578779986521121078999-----------9999999987697---1999702223688885322431


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             14617567899999999999999898899972656467877355217986333556767764678886112688999999
Q batch____       305 LYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSN  384 (728)
Q Consensus       305 y~a~~~~yGt~~dfk~LVd~aH~~GI~VIlDvV~NH~~~~~~~~~~~dg~~~y~~~~~~~~~~~~wg~~~~n~~~~~Vr~  384 (728)
                      +..-..+|..  .|+.|++.+|++||+--|=+-|-=.+.++.-++..+.+...........   ..+...+|+.||+|++
T Consensus       383 W~~~~~kfP~--Gl~~l~d~v~~~Gm~fGlW~EPEmV~~~S~ly~~HPDw~l~~~~~~~~~---~r~q~vLDl~~P~v~~  457 (742)
T c3mi6A_         383 WFVDQRKFPD--GIEHFSQAVHQQGXKFGLWFEPEXVSVDSDLYQQHPDWLIHAPKSTPTP---GRHQFVLDXARPEVVD  457 (742)
T ss_dssp             CSBCTTTCTT--HHHHHHHHHHHTTCEEEEEECTTEECSSSSHHHHCGGGBCCCTTCCCCC---SSSCEEBCTTCHHHHH
T ss_pred             EEECHHHCCC--CHHHHHHHHHHCCCCCEEEECHHHCCCCCHHHHHCCCEEEECCCCCCCC---CCCEEEEECCCHHHHH
T ss_conf             2447658288--2799999999739832487501325887378885964168638974013---5752898578889999


Q ss_pred             HHHHHHHHHHHHCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCH
Q ss_conf             99999999998729989997666641443444555444444457656531689999999998775697799960158866
Q batch____       385 FLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFP  464 (728)
Q Consensus       385 ~l~d~~~yWi~eygVDGfR~Dav~~m~~~~~~~~~~~~~~~~~g~~~~~~~~~fl~~~~~~v~~~~p~~~liaE~~~~~~  464 (728)
                      ++++.+.-.+++++||.+..|     ...+.........+....+.....-..-+-.+-+.+++.+|++++         
T Consensus       458 ~i~~~i~~ll~e~gidYiKwD-----~Nr~~~~~~~~~~~~~~~~~~~~~~~~g~y~~ld~L~~~~P~v~i---------  523 (742)
T c3mi6A_         458 YLFKLXSQXIESANLDYIKWD-----XNRYATEXFSSRLTSDQQLELPHRYILGVYQLYARLTQAYPNVLF---------  523 (742)
T ss_dssp             HHHHHHHHHHHHHTCSEEEEC-----CCSCCCSCCCSSSCGGGGGGHHHHHHHHHHHHHHHHHHHCTTCEE---------
T ss_pred             HHHHHHHHHHHHCCCCEEEEC-----CCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE---------
T ss_conf             999878888775497259960-----665301014566764322025899999999999999875897499---------


Q ss_pred             HHHCCCCCCCCCCCCEECHHHHHHHHHHH-------HCCCCHHHHHHHHHHHCCCCCCCCCEEEEC-CCCCCCCCCCHHC
Q ss_conf             65211225787721021838999999986-------138310234443332101468102178405-7764124742000
Q batch____       465 GVSRPQDMGGLGFWYKWNLGWMHDTLDYM-------KLDPVYRQYHHDKLTFGILYNYTENFVLPL-SHDEVVHGKKSIL  536 (728)
Q Consensus       465 ~~~~~~~~gg~gfd~~~n~~~~~~~~~~~-------~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~-sHD~~~~~~~~~~  536 (728)
                         .....||.-+|+.        ++.+.       ..++..|..-................+... +|...+...    
T Consensus       524 ---E~CssGGgR~D~g--------~l~~~~~~w~SD~tda~~R~~Iq~g~s~~~P~~~~~~hv~~~p~h~t~r~~~----  588 (742)
T c3mi6A_         524 ---ESCASGGGRFDLG--------XXYYAPQAWTSDDTDAAERLLIQFGTSYGYPQAXXGAHVSAVPNDQXGRITS----  588 (742)
T ss_dssp             ---EECSTTTSSCSHH--------HHHHSSEEECCSCCCHHHHHHHHHHHTTTSCGGGEEEEEECSSCTTTCCCCC----
T ss_pred             ---EEECCCCCCCCHH--------HHCCCCEEECCCCCCHHHHHHHHCCCCCCCCHHHCCCCEEECCCCCCCCCCC----
T ss_conf             ---9214887544726--------6402761210777455468998708311478556123120077644465431----


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-HH
Q ss_conf             34689978999999999999998299249985302034689997563480001355643068999999999998878-76
Q batch____       537 DRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHH-KA  615 (728)
Q Consensus       537 ~~~~~~~~~~~~~~rla~a~~lt~pG~P~i~~G~E~G~~~~~~~~~~~dW~~~~~~~~~~~~l~~~~k~Li~lRk~~-pa  615 (728)
                                     +..-+..++.|...+-.                      +.........+.+++.++++|++ +.
T Consensus       589 ---------------l~~r~~val~g~~g~~~----------------------dl~~l~~~e~~~l~~~i~~yK~~R~l  631 (742)
T c3mi6A_         589 ---------------LKTRGAVAFFGDLGYEL----------------------DITKXAPTELDQVKKQVAFYKCYRQL  631 (742)
T ss_dssp             ---------------HHHHHHHHTSSEEEEES----------------------CSTTCCHHHHHHHHHHHHHHHHTHHH
T ss_pred             ---------------HHEEEHHHHCCCCCCCC----------------------CCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             ---------------00000122103421202----------------------01108998999999999998865077


Q ss_pred             HHCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCE-EEEEEECCCCCEEEEEC----CCCCCCEEEEEEECCCCCCCCCC
Q ss_conf             54376555551488621489878999996399986-99999565984445762----25899718999727832028766
Q batch____       616 MHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNE-IIVASNFTPVPRHDYRF----GINQPGKWREILNTDSMHYHGSN  690 (728)
Q Consensus       616 L~~~d~~~~~~~~~~~~~~~~~Viaf~R~~~~g~~-vlVv~Nfs~~~~~~~~i----~lP~~G~~~~ilnSd~~~ygG~~  690 (728)
                      |..|+.    .+.......+.++.++.-.++++++ ++++++....+...+..    +|.....|++  ..+...|+|..
T Consensus       632 l~~G~~----~rl~~p~~~~~~~~a~~~v~~d~~~~v~~~~~~~~~~~~~~~~~~l~GLdp~~~Y~v--~~~~~~~sG~~  705 (742)
T c3mi6A_         632 FQFGKF----YRIDSPFVEDGNVTSWQVVSDDQKQAIAARYQLLNHPNAPYTRFYFKGLRPNQRYQI--NDDPSTYYGDE  705 (742)
T ss_dssp             HHHSEE----EECSCTTSTTCCEEEEEEECTTSSEEEEEEEESSCCSSCCCEEECCCSCCTTCEEEE--TTCCSCEEHHH
T ss_pred             HHCCEE----EEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCEEEE--ECCCCEECHHH
T ss_conf             764558----984066778877239999977888699999971678876531035058889874788--02692684889


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEEEEECCC----------EEEEEEECC
Q ss_conf             5675542002333477330399995785----------489999648
Q batch____       691 AGNGGTVHSDEIASHGRQHSLSLTLPPL----------ATIWLVREA  727 (728)
Q Consensus       691 ~~~~~~~~~~~~~~~g~~~s~~i~lPp~----------s~vvL~~e~  727 (728)
                      .-+.+                 |.||..          ++.++.-||
T Consensus       706 Lm~~G-----------------l~~p~~~~~~~~~~df~s~~~~l~~  735 (742)
T c3mi6A_         706 LXNAG-----------------YFVPTILADGQESKDFYTQLFVVTA  735 (742)
T ss_dssp             HHHTC-----------------EEECCCCCCSSSCCSSEEEEEEEEE
T ss_pred             HHHCC-----------------CCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf             98689-----------------4356433343446770269999997


