34 c3n6uA_ Probab=99.28   E-value=1.1e-10  Score=80.45  Aligned_columns=181  Identities=13%

Q ss_pred             CCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCEEE
Q ss_conf             66431342002456664421122222101244543111121012344320134320452067787785279985057899
Q batch____        89 NEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLAL  168 (279)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~~~~~  168 (279)
                      +..++++..+.+..+.+.....   +...+|.+.+.........+...+.++.+|+++...+.................+
T Consensus         1 G~l~Ig~~~~~~~~~l~~~l~~---f~~~~P~i~i~i~~~~~~~~~~~l~~~~~D~~i~~~~~~~~~~~~~~~~~~~~~~   77 (205)
T c3n6uA_           1 GHITFAASPAIALAALPLALAS---FAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDV   77 (205)
T ss_dssp             CEEEEEECHHHHHTHHHHHHHH---HHHHCTTCEEEEEECCTTTTHHHHHTTSCSEEEEEECGGGSCTTEEEEEEEECCE
T ss_pred             CEEEEEEEHHHHHHHHHHHHHH---HHHHCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCEE
T ss_conf             9699995066798789999999---9997899789999879589999987168738999446878740278741555216


Q ss_pred             EECCCCCCCCCCCEEECCCC--------------CHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCEEEEEEHHHHC
Q ss_conf             98689731137625314578--------------5467877552013565058758978999999749939960278861
Q batch____       169 YTSAPSKLKGDLNYLRLEWG--------------PDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWAR  234 (279)
Q Consensus       169 v~~~~~~l~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~gi~~lp~~~~~  234 (279)
                      ++...+...........+..              ....................+++...+..++..|.|++++|...+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (205)
T c3n6uA_          78 VIVGQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYE  157 (205)
T ss_dssp             EEEEETTCTTTTCCSGGGGTTSEEEEECCTTSTTHHHHHHHHHTTCCCCEEEEEECCTTTHHHHHHTSSCBEEEEHHHHH
T ss_pred             EEEECCCCCCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCH
T ss_conf             76402333345643210010131289716986314678888663001222222220156665665279736653100341


Q ss_pred             CC---CCEEEE-CCCCCCEEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf             29---988992-778872066999955888888899999997
Q batch____       235 KK---GGLHTV-VDSTTLSRPLYAIWLQNSDKNALIRDLLKI  272 (279)
Q Consensus       235 ~~---~~l~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~fi~l  272 (279)
                      ..   +.++.+ +.++...+++|++|++++..+|+++.|++.
T Consensus       158 ~~~~~~~l~~~~~~~~~~~~~~~lv~~~~~~~s~~~~~fi~~  199 (205)
T c3n6uA_         158 RNAFKDQLCSIPLQDALPNPTIYVLRRHDLPVTPAAAGLIRW  199 (205)
T ss_dssp             SSTTGGGEEECCCCSCCCCCEEEEEEETTSCCCHHHHHHHHH
T ss_pred             HHHCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHH
T ss_conf             242239789984778873056999963879988899999999