BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (97 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P71376 RNA-binding protein HI1333 n=269 Tax=Proteobacte... 140 9e-33 UniRef50_C1D4U0 CRS1_YhbY domain containing protein n=15 Tax=Pro... 100 2e-20 UniRef50_Q31HG7 Putative uncharacterized protein n=1 Tax=Thiomic... 98 6e-20 UniRef50_C7R8L3 Putative uncharacterized protein n=1 Tax=Kangiel... 98 1e-19 UniRef50_Q3BUR9 Putative uncharacterized protein n=20 Tax=Xantho... 95 8e-19 UniRef50_B9ZLQ7 Putative uncharacterized protein n=1 Tax=Thioalk... 91 9e-18 UniRef50_D0KVG6 Putative uncharacterized protein n=1 Tax=Halothi... 91 1e-17 UniRef50_B5JX32 Putative uncharacterized protein n=1 Tax=gamma p... 91 1e-17 UniRef50_Q0A767 Putative uncharacterized protein n=2 Tax=Ectothi... 90 2e-17 UniRef50_A6EYL2 Predicted RNA-binding protein containing KH doma... 90 2e-17 UniRef50_Q3SJR6 Putative uncharacterized protein n=2 Tax=Proteob... 89 6e-17 UniRef50_D1KBJ6 RNA-binding protein n=3 Tax=Gammaproteobacteria ... 87 2e-16 UniRef50_B6BX40 CRS1 / YhbY domain superfamily n=2 Tax=Nitrosoco... 86 5e-16 UniRef50_B2HXD4 Predicted RNA-binding protein containing KH doma... 85 9e-16 UniRef50_A1WXX4 Putative uncharacterized protein n=1 Tax=Halorho... 85 9e-16 UniRef50_C5SEC6 Putative uncharacterized protein n=1 Tax=Allochr... 85 9e-16 UniRef50_C6NUK8 Putative uncharacterized protein n=1 Tax=Acidith... 82 4e-15 UniRef50_A0Q5D2 RNA-binding protein n=21 Tax=Gammaproteobacteria... 82 5e-15 UniRef50_Q1K0N8 Putative uncharacterized protein n=1 Tax=Desulfu... 82 6e-15 UniRef50_Q607B1 Putative uncharacterized protein n=1 Tax=Methylo... 82 6e-15 UniRef50_P95453 Probable RNA-binding protein PA4753 n=18 Tax=Gam... 82 8e-15 UniRef50_A9HYV3 Putative uncharacterized protein n=5 Tax=Bordete... 81 9e-15 UniRef50_A6T082 Uncharacterized conserved protein n=4 Tax=Betapr... 81 1e-14 UniRef50_A9WDQ0 Putative uncharacterized protein n=2 Tax=Chlorof... 80 3e-14 UniRef50_B3E4L2 Putative uncharacterized protein n=6 Tax=Deltapr... 78 7e-14 UniRef50_Q1MZR4 Putative uncharacterized protein n=3 Tax=Gammapr... 78 1e-13 UniRef50_Q47HI3 Putative uncharacterized protein n=7 Tax=Betapro... 77 2e-13 UniRef50_UPI0000E87C63 hypothetical protein MB2181_02825 n=1 Tax... 77 2e-13 UniRef50_C4KVI2 CRS1 n=80 Tax=Betaproteobacteria RepID=C4KVI2_BURPS 76 4e-13 UniRef50_B5ENR6 Putative uncharacterized protein n=2 Tax=Acidith... 76 4e-13 UniRef50_B1XUM7 Putative uncharacterized protein n=2 Tax=Polynuc... 74 1e-12 UniRef50_Q1DDA8 Putative uncharacterized protein n=1 Tax=Myxococ... 74 1e-12 UniRef50_A0LDZ2 Putative uncharacterized protein n=2 Tax=Proteob... 74 1e-12 UniRef50_C5BQ04 RNA-binding protein, translation initiation fact... 74 1e-12 UniRef50_Q82WX8 Uncharacterized protein family UPF0044 n=2 Tax=N... 74 2e-12 UniRef50_C6MBV6 Putative uncharacterized protein n=1 Tax=Nitroso... 73 3e-12 UniRef50_B4X4Q0 CRS1 / YhbY domain superfamily n=2 Tax=Alcanivor... 73 3e-12 UniRef50_A0Z550 Predicted RNA-binding protein containing KH doma... 72 4e-12 UniRef50_Q39US9 Putative uncharacterized protein n=5 Tax=Geobact... 72 5e-12 UniRef50_C9YA67 RNA-binding protein HI1333 n=10 Tax=Betaproteoba... 72 7e-12 UniRef50_C5V7C4 Putative uncharacterized protein n=2 Tax=Gallion... 72 7e-12 UniRef50_Q0EZJ5 Putative uncharacterized protein n=1 Tax=Maripro... 71 1e-11 UniRef50_A6GAH3 Putative uncharacterized protein n=1 Tax=Plesioc... 70 2e-11 UniRef50_C3RQM1 Cation antiporter n=5 Tax=Bacteria RepID=C3RQM1_... 70 2e-11 UniRef50_C7RKS5 Putative uncharacterized protein n=1 Tax=Candida... 70 2e-11 UniRef50_B7GKA7 Predicted RNA-binding protein containing KH doma... 70 2e-11 UniRef50_P54454 Probable RNA-binding protein yqeI n=17 Tax=Firmi... 70 2e-11 UniRef50_Q5P1G1 Predicted RNA-binding protein containing KH doma... 70 2e-11 UniRef50_D1VUN4 RNA-binding protein YhbY n=1 Tax=Peptoniphilus l... 70 2e-11 UniRef50_C8PXU7 23S rRNA methyltransferase J n=4 Tax=Moraxellace... 68 8e-11 UniRef50_Q03GA6 RNA-binding protein, KH domain n=26 Tax=Lactobac... 68 1e-10 UniRef50_B2V0A9 CRS1/YhbY domain protein n=22 Tax=Firmicutes Rep... 68 1e-10 UniRef50_A8VU66 Cation antiporter n=4 Tax=Bacillales RepID=A8VU6... 67 1e-10 UniRef50_A9B571 Putative uncharacterized protein n=1 Tax=Herpeto... 67 1e-10 UniRef50_Q4JMW4 Putative uncharacterized protein n=1 Tax=uncultu... 67 1e-10 UniRef50_A8ZX30 Putative uncharacterized protein n=2 Tax=Bacteri... 67 2e-10 UniRef50_D1D4Q5 RNA-binding protein n=21 Tax=Neisseria RepID=D1D... 67 2e-10 UniRef50_D1YMG0 RNA-binding protein, YhbY family n=3 Tax=Veillon... 67 2e-10 UniRef50_C4Z0A1 Putative RNA-binding protein containing KH domai... 66 3e-10 UniRef50_C8NFJ8 RNA-binding protein YhbY n=2 Tax=Granulicatella ... 65 4e-10 UniRef50_C9N0K7 RNA-binding protein YhbY n=4 Tax=Bacteria RepID=... 65 8e-10 UniRef50_A5EXB7 YhbY family protein n=2 Tax=Cardiobacteriaceae R... 64 1e-09 UniRef50_C4FU95 Putative uncharacterized protein n=1 Tax=Catonel... 64 2e-09 UniRef50_B1HUI3 UPF0044 protein n=9 Tax=Bacillales RepID=B1HUI3_... 64 2e-09 UniRef50_B8FUR8 Putative uncharacterized protein n=4 Tax=Clostri... 64 2e-09 UniRef50_B1KZR2 CRS1/YhbY domain protein n=24 Tax=Bacteria RepID... 63 3e-09 UniRef50_C2CFN8 RNA binding protein n=5 Tax=Clostridiales Family... 62 4e-09 UniRef50_B6BWT9 CRS1 / YhbY domain superfamily n=1 Tax=beta prot... 62 6e-09 UniRef50_Q03J88 Predicted RNA-binding protein containing KH doma... 61 1e-08 UniRef50_B4D0Q3 Putative uncharacterized protein n=1 Tax=Chthoni... 61 1e-08 UniRef50_Q6AML8 Putative uncharacterized protein n=1 Tax=Desulfo... 61 1e-08 UniRef50_Q2IMK4 Putative uncharacterized protein n=5 Tax=Myxococ... 60 2e-08 UniRef50_Q38VT8 Putative uncharacterized protein n=1 Tax=Lactoba... 60 2e-08 UniRef50_D0LJW9 Putative uncharacterized protein n=1 Tax=Haliang... 60 2e-08 UniRef50_B9MRC0 Putative uncharacterized protein n=2 Tax=Clostri... 60 2e-08 UniRef50_C0QM00 Putative uncharacterized protein n=1 Tax=Desulfo... 60 3e-08 UniRef50_B8CXY9 Putative uncharacterized protein n=1 Tax=Halothe... 59 4e-08 UniRef50_B5JKD4 CRS1 / YhbY domain superfamily n=1 Tax=Verrucomi... 59 6e-08 UniRef50_C2HJU9 RNA binding protein n=3 Tax=Clostridiales Family... 58 8e-08 UniRef50_Q8TUY0 Predicted RNA-binding protein containing KH doma... 58 9e-08 UniRef50_A5TU14 Possible RNA binding protein n=8 Tax=Fusobacteri... 57 2e-07 UniRef50_C3W9Y6 Putative uncharacterized protein n=1 Tax=Fusobac... 57 2e-07 UniRef50_C9LL05 RNA-binding protein YhbY n=1 Tax=Dialister invis... 57 2e-07 UniRef50_D2RB57 RNA-binding protein, YhbY family n=17 Tax=Actino... 57 2e-07 UniRef50_D1AKP9 Putative uncharacterized protein n=1 Tax=Sebalde... 56 4e-07 UniRef50_B1ZUH5 Putative uncharacterized protein n=2 Tax=Opituta... 56 4e-07 UniRef50_C8NZI1 RNA-binding protein YhbY n=1 Tax=Erysipelothrix ... 56 4e-07 UniRef50_C2KVY9 RNA binding protein n=1 Tax=Oribacterium sinus F... 55 6e-07 UniRef50_C7TK22 RNA-binding protein n=8 Tax=Lactobacillus RepID=... 55 7e-07 UniRef50_C6JNB7 Putative uncharacterized protein n=5 Tax=Fusobac... 55 1e-06 UniRef50_B8DU23 Putative uncharacterized protein n=5 Tax=Actinob... 54 1e-06 UniRef50_B9XGY3 Putative uncharacterized protein n=1 Tax=bacteri... 52 5e-06 UniRef50_B7C8W0 Putative uncharacterized protein n=1 Tax=Eubacte... 52 6e-06 UniRef50_C9XNP1 Putative uncharacterized protein n=7 Tax=Clostri... 51 1e-05 UniRef50_D2MM12 RNA-binding protein, YhbY family n=1 Tax=Bulleid... 50 2e-05 UniRef50_Q58068 Probable RNA-binding protein MJ0652 n=11 Tax=Met... 50 2e-05 UniRef50_A9S9R6 Predicted protein n=1 Tax=Physcomitrella patens ... 50 2e-05 UniRef50_Q2S2W7 CRS1 / YhbY domain superfamily n=1 Tax=Salinibac... 50 2e-05 UniRef50_D1AXZ7 Putative uncharacterized protein n=1 Tax=Strepto... 49 7e-05 UniRef50_D1PPV8 Transcription-repair coupling factor n=1 Tax=Sub... 49 7e-05 UniRef50_C8QYL8 Putative uncharacterized protein n=1 Tax=Desulfu... 47 2e-04 UniRef50_UPI0001A7B00B RNA binding n=1 Tax=Arabidopsis thaliana ... 47 2e-04 UniRef50_D1IXC2 Whole genome shotgun sequence of line PN40024, s... 46 3e-04 UniRef50_C6TB79 Putative uncharacterized protein n=1 Tax=Glycine... 45 8e-04 UniRef50_C0PR74 Putative uncharacterized protein n=1 Tax=Picea s... 45 9e-04 UniRef50_B9HRH4 Predicted protein (Fragment) n=4 Tax=rosids RepI... 45 9e-04 UniRef50_A8TFT3 Putative uncharacterized protein n=1 Tax=Methano... 43 0.003 UniRef50_Q9FW07 Os10g0512500 protein n=2 Tax=Oryza sativa RepID=... 43 0.003 UniRef50_Q0W1M5 Putative uncharacterized protein n=2 Tax=Euryarc... 42 0.004 UniRef50_C9KQ51 CRS1 / YhbY domain protein n=1 Tax=Mitsuokella m... 42 0.005 UniRef50_B6T8H1 CRS1 / YhbY domain containing protein n=5 Tax=Po... 42 0.008 UniRef50_Q4JCL7 Conserved protein n=2 Tax=Sulfolobus RepID=Q4JCL... 42 0.009 UniRef50_A7C1L1 Putative uncharacterized protein n=1 Tax=Beggiat... 40 0.026 UniRef50_A2BN52 Conserved archaeal protein n=1 Tax=Hyperthermus ... 40 0.026 UniRef50_UPI0001698ED9 hypothetical protein Epers_16139 n=1 Tax=... 40 0.033 UniRef50_C1AC38 Putative uncharacterized protein n=1 Tax=Gemmati... 39 0.039 UniRef50_Q8U0T5 Putative uncharacterized protein n=1 Tax=Pyrococ... 39 0.045 UniRef50_Q9YD21 Putative uncharacterized protein n=1 Tax=Aeropyr... 39 0.045 UniRef50_A1RYP6 Putative uncharacterized protein n=1 Tax=Thermof... 38 0.088 UniRef50_A3DNH0 Putative uncharacterized protein n=2 Tax=Desulfu... 38 0.097 >UniRef50_P71376 RNA-binding protein HI1333 n=269 Tax=Proteobacteria RepID=Y1333_HAEIN Length = 99 Score = 140 bits (354), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 72/95 (75%), Positives = 77/95 (81%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LSTKQKQ LKGLAH L PVV+LG NGLTEGVLAEIE AL HHELIKVK+A DRETK LI Sbjct: 4 LSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQLI 63 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + AIVRET A VQ IG LVLYRP++E KI LPR Sbjct: 64 INAIVRETKAAQVQTIGHILVLYRPSEEAKIQLPR 98 >UniRef50_C1D4U0 CRS1_YhbY domain containing protein n=15 Tax=Proteobacteria RepID=C1D4U0_LARHH Length = 106 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 46/96 (47%), Positives = 70/96 (72%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ +Q+Q+LKGLAH L PVV++G+NGL++ V+ EI L+ HELIKV++ +DRE + Sbjct: 3 IELTPEQRQYLKGLAHALNPVVMIGNNGLSDSVIREIAVNLDAHELIKVRVHGDDREVRA 62 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 + I + A VQ+IGK LV+YRP+ +++ISLP Sbjct: 63 ALYGQICDDLDAAPVQMIGKLLVIYRPSDKQRISLP 98 >UniRef50_Q31HG7 Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HG7_THICR Length = 101 Score = 98.2 bits (243), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 43/95 (45%), Positives = 73/95 (76%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS Q + LKG+AH L P++++G+NG+TE ++ E+E+ LEHHEL+K+K+A+ +R + I Sbjct: 7 LSKNQIKFLKGIAHGLNPIIIIGANGVTESLMEELEKTLEHHELLKIKMASAERSDRKEI 66 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 ++ I++ TGA VQ IGKT+V++R ++E ++ LP+ Sbjct: 67 IDYILQNTGAQLVQSIGKTVVIFRQSEESELQLPK 101 >UniRef50_C7R8L3 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8L3_KANKD Length = 109 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 46/95 (48%), Positives = 66/95 (69%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS Q + L+G AH LKP+V++G+NG+T+ VL EI AL HHELIK+K+ E+RE K + Sbjct: 15 LSNNQVKFLRGKAHSLKPIVMVGANGVTDNVLEEINIALNHHELIKIKVRAEEREDKQAM 74 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 ++ I ++T A +QVIG L +YR + KI LP+ Sbjct: 75 IDHICQQTKAAKIQVIGHNLSIYRKSANPKIILPK 109 >UniRef50_Q3BUR9 Putative uncharacterized protein n=20 Tax=Xanthomonadaceae RepID=Q3BUR9_XANC5 Length = 101 Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 46/96 (47%), Positives = 68/96 (70%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++ Q + L+G AH LK ++ G G+T LAE+E+ LE HEL+KVK+A+EDRET+ + Sbjct: 5 LTSAQNRFLRGQAHDLKALLQTGGKGVTPAFLAELEEVLERHELVKVKVASEDRETRDAL 64 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISLPR 97 + ++ +TG+ VQ IG +LYRP+KE R+I LPR Sbjct: 65 IAELIEQTGSALVQRIGHVAILYRPSKEKRQIVLPR 100 >UniRef50_B9ZLQ7 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLQ7_9GAMM Length = 108 Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 42/86 (48%), Positives = 58/86 (67%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 +NL+ Q++HL+ LAHP KP+V +G NGLT+ V+ E+EQAL HHEL+K+K+ DRE + Sbjct: 10 VNLTDAQRRHLRSLAHPRKPIVTIGRNGLTDAVVKELEQALAHHELVKIKVNIGDREARN 69 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 VE + TG VQ IG L+R Sbjct: 70 GTVEDLCERTGGALVQRIGYVATLFR 95 >UniRef50_D0KVG6 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVG6_HALNC Length = 106 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 1/98 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQKQ L+ AH L PVVLLG +GLT+ V+AEIE AL HELIKV+I +DR+ K Sbjct: 1 MALTNKQKQFLRAQAHHLNPVVLLGQHGLTDAVMAEIELALSIHELIKVRIPGQDRDDKK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE-RKISLPR 97 +++ I TG+ VQ +G V YRP + +++LP+ Sbjct: 61 NMMQQIATTTGSELVQSVGHIAVFYRPDPDGTRLALPK 98 >UniRef50_B5JX32 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX32_9GAMM Length = 99 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 1/98 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LS KQ +HL+GLAH LKPVV++G NGL+E V+ EI AL HELIKVK++ + + Sbjct: 1 MQLSNKQIKHLRGLAHDLKPVVMVGQNGLSENVIEEIRGALTFHELIKVKVSGYEGSDRQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER-KISLPR 97 IVE I E A ++Q IGK +VL++ + KI +P+ Sbjct: 61 EIVEQICNEQKATHIQSIGKMVVLFKRNPNKIKIEIPK 98 >UniRef50_Q0A767 Putative uncharacterized protein n=2 Tax=Ectothiorhodospiraceae RepID=Q0A767_ALHEH Length = 100 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/100 (52%), Positives = 65/100 (65%), Gaps = 4/100 (4%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ Q++HL+ LAH LKPVV G+ GLTE V+AEIE ALE HELIKVK+ +R + Sbjct: 1 MRLNESQRRHLRRLAHDLKPVVRTGNAGLTEAVMAEIELALESHELIKVKLVGLERADRQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK----ISLP 96 +E I ETGA VQ +G+ VLYR RK +SLP Sbjct: 61 PTIEQICVETGAELVQKVGQVAVLYRANPRRKPGQRVSLP 100 >UniRef50_A6EYL2 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=11 Tax=Gammaproteobacteria RepID=A6EYL2_9ALTE Length = 103 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 44/89 (49%), Positives = 64/89 (71%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M+LS +Q++ +G+AH LKPV+++G GLTEG+ E+E+AL HELIK+K+A++DRET+ Sbjct: 1 MSLSPEQRREYRGIAHNLKPVIIVGDKGLTEGLQEELERALNDHELIKIKVASQDRETRQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK 89 V A+ +GA VQ IGK V+ R K Sbjct: 61 EAVAALCEASGAELVQTIGKIAVILRRAK 89 >UniRef50_Q3SJR6 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q3SJR6_THIDA Length = 98 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 45/94 (47%), Positives = 64/94 (68%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ Q+Q+L+GLAH +PVV++ GLT VL EIE+AL HELIK+K A+++ E + Sbjct: 4 LTPAQRQYLRGLAHNRQPVVMIRGQGLTPAVLKEIERALAAHELIKIKAASDESEVRRAW 63 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 + I +GA VQ IGK LV+YRP + +I+LP Sbjct: 64 LTEICAASGAEPVQQIGKVLVIYRPAAKPEITLP 97 >UniRef50_D1KBJ6 RNA-binding protein n=3 Tax=Gammaproteobacteria RepID=D1KBJ6_9GAMM Length = 100 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/98 (43%), Positives = 67/98 (68%), Gaps = 1/98 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ QK+ L+ H LKPVV++G +GL+E VLAE+E ++ HEL+K+KI TED++ K Sbjct: 2 IKLTNNQKKFLRSKGHALKPVVMVGQHGLSESVLAELESSMNKHELLKIKIRTEDKDEKQ 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER-KISLPR 97 +++ I+ + + VQVIG +V+YR E +I LPR Sbjct: 62 KMIDKIIEFSQSHLVQVIGNVMVIYRAFDEDPQIILPR 99 >UniRef50_B6BX40 CRS1 / YhbY domain superfamily n=2 Tax=Nitrosococcus oceani RepID=B6BX40_9GAMM Length = 96 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 42/96 (43%), Positives = 69/96 (71%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ Q ++L+ LAH LKPVV++G +G+T+ VL EI +LEHHELIK+K+ +RE ++ Sbjct: 1 MPLTKNQTRYLRTLAHSLKPVVIVGQSGITKAVLDEIAGSLEHHELIKIKMHDAEREERS 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 +++ +++ T A VQVIG+ + YR ++ +I+LP Sbjct: 61 AMIKHVLQVTQAELVQVIGRIGIFYRRGEKARITLP 96 >UniRef50_B2HXD4 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=20 Tax=Gammaproteobacteria RepID=B2HXD4_ACIBC Length = 107 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 42/86 (48%), Positives = 59/86 (68%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS +++ L+ + H L PVV++G GLT+ V+ E +AL HELIKVKIA EDRE + + Sbjct: 4 LSIHERKRLRQIGHVLNPVVMIGGQGLTDAVIEETLRALNDHELIKVKIAGEDREARAAV 63 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPT 88 ++AIV TGA VQ IGK ++LY+ Sbjct: 64 IDAIVEATGAEAVQKIGKIVLLYKKA 89 >UniRef50_A1WXX4 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXX4_HALHL Length = 118 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 44/91 (48%), Positives = 60/91 (65%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L Q + L+ L H LKPVVL G+ GL+EGVL EIE+AL+ HELIKVK+A +E + Sbjct: 23 MQLDPDQLKQLRRLGHALKPVVLTGAAGLSEGVLEEIERALDDHELIKVKLAGASKEERQ 82 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + I +TGA VQ IG+ ++LY+ E+ Sbjct: 83 AMTTEIAEQTGAVVVQTIGRIVLLYQENPEK 113 >UniRef50_C5SEC6 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SEC6_CHRVI Length = 100 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 2/99 (2%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M ++ KQK+ LK H LKPVVL+G G+TE VLAEIE AL+HHELIKV+I DR+ + Sbjct: 1 MPITEKQKRWLKPQVHHLKPVVLVGQYGITEPVLAEIEIALDHHELIKVRINAGDRDERD 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR--PTKERKISLPR 97 + I TGA + IG LYR P K I LP+ Sbjct: 61 AAIGLICERTGADLINRIGNVAALYRHNPKKRDPIVLPK 99 >UniRef50_C6NUK8 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUK8_9GAMM Length = 113 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 39/85 (45%), Positives = 60/85 (70%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS+K++Q LK AHPL+PV+L+GS GL ++ E+++ L HHELIKV++ +RE + + Sbjct: 2 LSSKERQALKARAHPLQPVLLVGSAGLGPALMEELDRVLLHHELIKVRLPAVERELRDAM 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRP 87 V I+ +GA + IG+ L+LYRP Sbjct: 62 VAEILATSGAEAIARIGRILILYRP 86 >UniRef50_A0Q5D2 RNA-binding protein n=21 Tax=Gammaproteobacteria RepID=A0Q5D2_FRATN Length = 92 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 2/91 (2%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 + KQ+Q LK AH LKPVVL+G GLTE V+ EI+ AL H+LIKVK+ +E K I Sbjct: 1 MDVKQQQKLKAQAHSLKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQI 60 Query: 63 VEAIVRETGACNVQVIGKTLVLYR--PTKER 91 I + T + VQ+IG LVLYR P KE+ Sbjct: 61 ASEITQATSSELVQIIGNILVLYRRNPNKEK 91 >UniRef50_Q1K0N8 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0N8_DESAC Length = 101 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 40/97 (41%), Positives = 64/97 (65%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + LS KQ + L+GL H L PVVL+G + +++GV+ +E+ L+ HELIKVK+ + Sbjct: 4 VTLSGKQNRFLRGLGHHLNPVVLIGKDAVSQGVIDSVEEVLDQHELIKVKLLEGCLVDRK 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + E + T + VQ++G+T++L+RPT E KI LP+ Sbjct: 64 NVAEQLSTTTDSSVVQILGRTILLFRPTPEGKIELPK 100 >UniRef50_Q607B1 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus RepID=Q607B1_METCA Length = 96 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 41/84 (48%), Positives = 56/84 (66%) Query: 8 KQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIV 67 ++ L+ AH LKPVV+ G G+T GVL EI+ ALEHHELIKV++ DRET+ + I Sbjct: 9 RRQLRAKAHKLKPVVITGQAGITPGVLGEIDMALEHHELIKVRVNAGDRETRAEMTAQIC 68 Query: 68 RETGACNVQVIGKTLVLYRPTKER 91 E+GA VQ +G + L+R + ER Sbjct: 69 GESGAELVQSLGHVITLFRKSPER 92 >UniRef50_P95453 Probable RNA-binding protein PA4753 n=18 Tax=Gammaproteobacteria RepID=Y4753_PSEAE Length = 104 Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 61/86 (70%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ +QK+ K + H LKPV+++ NGLTEGVLAE+E+AL HELIKVK+A +R+ + Sbjct: 1 MALTQEQKKQFKSIGHHLKPVLIVAENGLTEGVLAELERALNDHELIKVKLALAERDDRR 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 +++ + ++ + VQ IGK ++YR Sbjct: 61 ALLDELCAQSRSDLVQSIGKMALVYR 86 >UniRef50_A9HYV3 Putative uncharacterized protein n=5 Tax=Bordetella RepID=A9HYV3_BORPD Length = 203 Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 57/87 (65%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+++++ L+ AHPL+PVVL+G NGLT+ VL EI++AL H LIKV+ DR+ + Sbjct: 4 LELTSRERSDLRSAAHPLRPVVLIGDNGLTDAVLKEIDRALASHGLIKVRAGGSDRDERE 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 ++ +I V +GK L+L+RP Sbjct: 64 AMLASICDALSCAPVHHLGKMLILFRP 90 >UniRef50_A6T082 Uncharacterized conserved protein n=4 Tax=Betaproteobacteria RepID=A6T082_JANMA Length = 156 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/90 (44%), Positives = 57/90 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ ++ L+ AH L PVV++G GLT GVL EI+ +L H LIKV++ +DRE + Sbjct: 2 LKLTPAERSSLRAEAHALSPVVIIGEAGLTPGVLKEIDGSLNSHGLIKVRVFGDDREARV 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 I + I + A +Q IGK LV+YRP KE Sbjct: 62 TIYDTICEKLDAAPIQHIGKLLVVYRPKKE 91 >UniRef50_A9WDQ0 Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WDQ0_CHLAA Length = 95 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/93 (49%), Positives = 63/93 (67%), Gaps = 6/93 (6%) Query: 7 QKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAI 66 Q+ +L+ LAHPL V++G NGLTEG+LA+IEQ L HELIKV+ + ++ K + E I Sbjct: 5 QRAYLRRLAHPLPVTVMIGKNGLTEGILAKIEQELNAHELIKVRF-LDHKDMKQSLTETI 63 Query: 67 VRETGACNVQVIGKTLVLYR----PTKERKISL 95 V ETGA V +IG T +L+R PT +RKI + Sbjct: 64 VSETGADLVAIIGHTAILFRQHADPT-QRKIQV 95 >UniRef50_B3E4L2 Putative uncharacterized protein n=6 Tax=Deltaproteobacteria RepID=B3E4L2_GEOLS Length = 109 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 44/94 (46%), Positives = 58/94 (61%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+HL+GL H LKPV+L+G L E ++AE E AL HELIKVK+ + Sbjct: 12 LTGKQKRHLRGLGHSLKPVILIGKKELDEALIAETEAALACHELIKVKVLENCMLDRHEA 71 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 EA+ TG+ QV+GKT +LYR + I LP Sbjct: 72 AEALSEATGSDVAQVLGKTFLLYRAAVKPVIVLP 105 >UniRef50_Q1MZR4 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=Q1MZR4_9GAMM Length = 101 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/90 (45%), Positives = 57/90 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ ++K+ LK + H L PVV + NGL+E V+ EI++ALE HELIKVK A DR+ K Sbjct: 1 MQLTQERKKALKAIGHKLNPVVTVAGNGLSESVILEIDRALEDHELIKVKFAVGDRDLKK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 ++ + T + VQ IG + YRP KE Sbjct: 61 DLLVETEKVTRSTLVQSIGNIGLFYRPAKE 90 >UniRef50_Q47HI3 Putative uncharacterized protein n=7 Tax=Betaproteobacteria RepID=Q47HI3_DECAR Length = 120 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/88 (43%), Positives = 53/88 (60%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + LS+ Q+ L+ AH L PVV + NGLTE VL EI+ L H+LIK+++ + RE + Sbjct: 2 LQLSSAQRSELRAQAHNLNPVVSIAENGLTEAVLKEIDLNLRAHQLIKIRVYGDSRENRI 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPT 88 E I + A VQ IGK LV++RP Sbjct: 62 AFYEQICAQLDAAPVQHIGKLLVVFRPA 89 >UniRef50_UPI0000E87C63 hypothetical protein MB2181_02825 n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C63 Length = 96 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/95 (42%), Positives = 63/95 (66%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++KQ +LK L+HP+ PVV +G GLT+ V+ EI+ L HELIK+K+ ++ +E + + Sbjct: 2 LNSKQTAYLKALSHPINPVVQIGLKGLTDSVIKEIDVNLNAHELIKIKVQSDSKENREGL 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPT-KERKISLP 96 +I + A + IGK LV++RP K+ KI+LP Sbjct: 62 WISICEKVRAEPINHIGKLLVIFRPNPKKTKITLP 96 >UniRef50_C4KVI2 CRS1 n=80 Tax=Betaproteobacteria RepID=C4KVI2_BURPS Length = 184 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 58/87 (66%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 ++LS ++ L+ AH LKPVVL+G+ GLT+ VLAEIE L H+LIK+++ ++R+ + Sbjct: 4 LSLSPAERSALRSEAHALKPVVLIGAEGLTDAVLAEIEVHLAAHQLIKIRVFGDERDERV 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 I + I A +Q IGK LV+++P Sbjct: 64 AIYDEICDRLNAAPIQHIGKLLVIWKP 90 >UniRef50_B5ENR6 Putative uncharacterized protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENR6_ACIF5 Length = 94 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 36/85 (42%), Positives = 58/85 (68%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L K +Q L+G AH LKPVV++G++G+T+GVLAE+E A+ HEL+KV++ + + + Sbjct: 2 LDAKHRQALRGQAHALKPVVIIGAHGITDGVLAELEVAIHAHELVKVRLPQVSHDERDAM 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRP 87 ++ + + A V IG+ L+LYRP Sbjct: 62 IKTLSTASHADVVGHIGRVLILYRP 86 >UniRef50_B1XUM7 Putative uncharacterized protein n=2 Tax=Polynucleobacter necessarius RepID=B1XUM7_POLNS Length = 208 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 56/87 (64%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + ++ Q++ LK AH L PVV++G +GLT V+ E + A+ HH LIK+++ +DRE + Sbjct: 4 LTITPAQRKSLKADAHDLSPVVMVGGDGLTPAVIKEAKLAINHHGLIKIRVFGDDRELRI 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 + E + + A VQ IGK LVL++P Sbjct: 64 AMYEELCDKLDAAPVQHIGKLLVLWKP 90 >UniRef50_Q1DDA8 Putative uncharacterized protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DDA8_MYXXD Length = 96 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 1/89 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQ++HL+ L H L+PVV++G G+TEGV+A IEQAL+ HELIKVKI E ET+ Sbjct: 1 MPLTGKQRRHLRALGHHLEPVVIVGQAGVTEGVIAAIEQALQDHELIKVKI-NEGPETRQ 59 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK 89 I A Q++G+T ++++ K Sbjct: 60 EAAARIAEGAQAELAQLLGRTALVFKKRK 88 >UniRef50_A0LDZ2 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=A0LDZ2_MAGSM Length = 106 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 4/100 (4%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M+L+ Q+ +LKGLAHPLKPVV +G G+ + VLA +E+AL HELIKV+ + +E + Sbjct: 1 MSLAGFQRTYLKGLAHPLKPVVFVGKEGVKDSVLAAVEEALLIHELIKVRF-LDFKEQRK 59 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE---RKISLPR 97 + +A+ ++ + V +IG +LYR E R+I LP+ Sbjct: 60 DLAKALATDSQSELVGMIGHLAILYRAHPEPEHRRIQLPK 99 >UniRef50_C5BQ04 RNA-binding protein, translation initiation factor n=3 Tax=Gammaproteobacteria RepID=C5BQ04_TERTT Length = 99 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 54/86 (62%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LS + + + L H L P+V + + G+T+ VLAEI +ALE HELIK+K+A DR+ + Sbjct: 1 MALSADKMKQYRTLGHSLNPIVTIAAKGVTDNVLAEINRALEDHELIKIKVAVVDRDARK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 ++ + + A VQ IGK +L+R Sbjct: 61 AAIQEVCTSSNAQLVQEIGKVALLFR 86 >UniRef50_Q82WX8 Uncharacterized protein family UPF0044 n=2 Tax=Nitrosomonas RepID=Q82WX8_NITEU Length = 126 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 58/94 (61%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L Q++ L AH L P V +G +GLTE V+ E++++L HELIKVK+ DR+ + Sbjct: 2 LELDMAQRRQLAASAHHLNPTVTIGKDGLTENVIGELDRSLLKHELIKVKVLDGDRDQRA 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKIS 94 ++E I A V+ IG+ L++YR ++KI+ Sbjct: 62 SLLEQICLSLNAAPVEQIGRVLIIYRINPDKKIA 95 >UniRef50_C6MBV6 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBV6_9PROT Length = 117 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 55/90 (61%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ ++ LK AH L PVV++G +GL+ V+ E+++ L HELIK+++ +DR + Sbjct: 2 LTLTIAHRRALKAQAHALNPVVMIGKSGLSPSVIEELDRGLSSHELIKIRVLIDDRIVRN 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 + E I + A VQ IGK ++YRP E Sbjct: 62 ELFEKICQLLNAAPVQHIGKVFIIYRPRPE 91 >UniRef50_B4X4Q0 CRS1 / YhbY domain superfamily n=2 Tax=Alcanivorax RepID=B4X4Q0_9GAMM Length = 104 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 56/90 (62%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LST+ + L+ + H LKPV++ G GL++ + E+ LE HELIKVK+ E R+ + Sbjct: 1 MPLSTQDIKRLRRIGHHLKPVLIFGDKGLSDNFVEELNLRLEDHELIKVKVNAETRDDRA 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 IV+A+ + A +Q IG +LYRP ++ Sbjct: 61 AIVQALTEKGSAELIQRIGNIALLYRPAQK 90 >UniRef50_A0Z550 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=4 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z550_9GAMM Length = 111 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 3/99 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +LS + + +AH L PVV +G NGL+ VLAE+++AL HELIK+KIA DR+ + Sbjct: 11 SLSNTVLRQYRAIAHKLNPVVRVGGNGLSTNVLAEVDRALGDHELIKIKIAVGDRDLRDA 70 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKE---RKISLPR 97 ++E + + T A VQ IG T L R + RK +L R Sbjct: 71 LIEQLCQTTHAQLVQRIGNTATLLRRNPQADPRKSNLQR 109 >UniRef50_Q39US9 Putative uncharacterized protein n=5 Tax=Geobacter RepID=Q39US9_GEOMG Length = 139 Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 59/95 (62%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+G+ H L PV+ +G ++ ++ E +ALEHHELIKVKI + + Sbjct: 43 LTGKQKRFLRGMGHSLNPVITVGKGEISTPLVRETSEALEHHELIKVKILESCIMDRHEV 102 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + + + GA QV+G+T +LYR +E K+ LP+ Sbjct: 103 ADELAKACGAEVAQVLGRTFLLYRKAEEPKLELPK 137 >UniRef50_C9YA67 RNA-binding protein HI1333 n=10 Tax=Betaproteobacteria RepID=C9YA67_9BURK Length = 157 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 54/87 (62%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ Q++ + AH L PVVL+G +GLT V EI+ AL H LIKV++ ++DR + Sbjct: 4 IQLTPAQRKEHRAEAHHLDPVVLVGGDGLTANVKKEIDAALNAHGLIKVRVFSDDRTARD 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 + + + E A +Q IGK LVL+RP Sbjct: 64 EMFKTLAEELNAAPIQHIGKLLVLWRP 90 >UniRef50_C5V7C4 Putative uncharacterized protein n=2 Tax=Gallionellaceae RepID=C5V7C4_9PROT Length = 116 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 1/87 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ ++ LKG AH LKP V++G+ GLTE VL EI +L+ HELIK+++ E + +T Sbjct: 2 LELTVTERLTLKGRAHQLKPTVMIGNAGLTESVLKEISVSLKQHELIKIRVMAERADRET 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 ++ E I + A VQ IGK LV+Y P Sbjct: 62 MLTE-ICTQLNAAPVQHIGKILVIYLP 87 >UniRef50_Q0EZJ5 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZJ5_9PROT Length = 92 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 2/87 (2%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATED-RETK 59 M LS+K+++ LK AH LKPV+ +G G+TE ++ E EQAL+ HELIKV IA E+ E K Sbjct: 1 MALSSKERKELKARAHHLKPVIRIGQKGITENLVLETEQALDTHELIKVHIAGENGSECK 60 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR 86 +E + R++ A V IGKT +LYR Sbjct: 61 ASGLE-LARQSHAEVVDHIGKTTILYR 86 >UniRef50_A6GAH3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAH3_9DELT Length = 104 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 1/86 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET-KTL 61 LS KQ++ L G+AH L PVV +G+ GLTE V A + +AL HELIKVK+ D + Sbjct: 5 LSPKQRKFLSGMAHSLSPVVQVGAAGLTESVFAAVSEALRRHELIKVKLPKVDSAAERHA 64 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRP 87 + + ++ + A V ++G+ V+Y+P Sbjct: 65 LYDTLIEGSEALRVALLGRVAVIYKP 90 >UniRef50_C3RQM1 Cation antiporter n=5 Tax=Bacteria RepID=C3RQM1_9MOLU Length = 95 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/94 (39%), Positives = 60/94 (63%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK++L+G+AH L + +G G+ + + I+ ALE HELIKVKI ++K I Sbjct: 2 LTGKQKRYLRGIAHNLNAIFQIGKEGVHQTQIEGIDDALEAHELIKVKILESCADSKNEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 + +T A VQ++G+T++LYRP+++ LP Sbjct: 62 ALELSMKTKADVVQILGRTIILYRPSEKEIYKLP 95 >UniRef50_C7RKS5 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKS5_9PROT Length = 119 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 52/87 (59%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + LS+ +++ L+ AH L PVV + GL+E V+ EI +L HELIKV++ DR+ + Sbjct: 2 LTLSSTERRSLRARAHSLHPVVAISDKGLSESVVREINASLISHELIKVRVHNADRQVRE 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 + + A VQ IGK LVL+RP Sbjct: 62 AFLNMLCERLQAAPVQHIGKLLVLWRP 88 >UniRef50_B7GKA7 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=211 Tax=Firmicutes RepID=B7GKA7_ANOFW Length = 97 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+ LAH L P+ +G G+ + ++ +I ALE ELIKV + E K ++ Sbjct: 2 LTGKQKRFLRSLAHHLTPIFQVGKGGVNDNMIKQIADALEARELIKVSVLKNCEEEKEVV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLPR 97 E + GA VQ+IG T+VLY+ ++E K I LP+ Sbjct: 62 AEQLAEGAGAEVVQLIGHTIVLYKESREHKQIVLPK 97 >UniRef50_P54454 Probable RNA-binding protein yqeI n=17 Tax=Firmicutes RepID=YQEI_BACSU Length = 96 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+ AH L P+ +G G+ + ++ +I +ALE ELIKV + E K + Sbjct: 2 LTGKQKRFLRSKAHHLTPIFQVGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKNDV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLP 96 EA+V+ + + VQ IG T+VLY+ +KE K I LP Sbjct: 62 AEALVKGSRSQLVQTIGNTIVLYKESKENKQIELP 96 >UniRef50_Q5P1G1 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=3 Tax=Rhodocyclaceae RepID=Q5P1G1_AZOSE Length = 156 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 56/88 (63%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ +++ L+ AH L PVV + NGLT VL EI+++L+ HELIK+K+ +R + + Sbjct: 4 LTPARRRELRAGAHHLNPVVSIAGNGLTPAVLGEIDRSLQAHELIKIKVHGAERAARDAL 63 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE 90 ++A+ GA +Q IG LV++R +E Sbjct: 64 MKAVCDALGASPIQHIGTILVIWRERRE 91 >UniRef50_D1VUN4 RNA-binding protein YhbY n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUN4_9FIRM Length = 97 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 56/90 (62%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L K + +LK LA+ L P+V +G GL+E + +++++LE HEL+K+K+ I Sbjct: 2 LRGKDRSYLKSLANNLDPLVQIGKFGLSESLFDQLDKSLEDHELVKIKVLKNSPVEAKEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK 92 V+ I+ +TGA VQ IG L +YR +KE K Sbjct: 62 VQEILEKTGAEFVQQIGSKLTIYRQSKENK 91 >UniRef50_C8PXU7 23S rRNA methyltransferase J n=4 Tax=Moraxellaceae RepID=C8PXU7_9GAMM Length = 105 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 36/85 (42%), Positives = 50/85 (58%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +LS +HLKG+ H L PVV++G G+T V+ EI +AL HELIKVKI + + Sbjct: 5 SLSNADIKHLKGIGHQLNPVVMIGGQGVTPTVIEEIGRALTDHELIKVKIPAGSKADRDA 64 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + AI T A V IG+ ++L R Sbjct: 65 VANAIAEATDATLVTSIGRMVLLLR 89 >UniRef50_Q03GA6 RNA-binding protein, KH domain n=26 Tax=Lactobacillales RepID=Q03GA6_PEDPA Length = 103 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 3/97 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L KQK++L+ AH +PV +G NGLTE L ++ AL++HEL+K+ I T Sbjct: 1 MELRGKQKRYLRARAHSYRPVFSVGKNGLTEAWLNQLAGALDNHELLKINIQQNSDATTA 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE---RKIS 94 E I T VQ IG+ LVL++ + E R+IS Sbjct: 61 EAKEFIESNTDIQVVQTIGRVLVLFKVSSEADKREIS 97 >UniRef50_B2V0A9 CRS1/YhbY domain protein n=22 Tax=Firmicutes RepID=B2V0A9_CLOBA Length = 98 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 9/99 (9%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKI----ATEDRET 58 L+ KQ+ +L+GL + P+ +G NG+ E L ++ QALE ELIK+K+ + RET Sbjct: 2 LTGKQRAYLRGLGSNMAPIFQVGKNGIEENFLTQVAQALEKRELIKIKVLENSGLDTRET 61 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPTKER-KISLP 96 LI +++ E VQ IG +VLY+ +K + KI +P Sbjct: 62 SDLICKSLKCE----GVQAIGNKMVLYKKSKNKPKIEIP 96 >UniRef50_A8VU66 Cation antiporter n=4 Tax=Bacillales RepID=A8VU66_9BACI Length = 97 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS KQK++L+G AH LK + +G G+ ++ ++ +ALE ELIKV I E K + Sbjct: 2 LSGKQKRYLRGEAHSLKAIFQVGKAGVNANLIKQVGEALEARELIKVSILQNCSEDKHDV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLPR 97 + A VQ+IG T++LY+ ++E K I LPR Sbjct: 62 ARELSEGADAETVQIIGNTIILYKESEENKTIELPR 97 >UniRef50_A9B571 Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B571_HERA2 Length = 100 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 4/100 (4%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L++ Q+Q+L+ LAH LKPVV +G GL+ V+A + AL+ HELIKVK E +E + Sbjct: 2 LTLNSNQRQYLRRLAHDLKPVVQIGKQGLSSTVVAAVAAALDAHELIKVKFG-EFKEERR 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK---ERKISLPR 97 + + +V +T A V ++G +LYRP++ ++ I LPR Sbjct: 61 ELTDQLVADTEATLVALVGNVAILYRPSRLDDKQVIVLPR 100 >UniRef50_Q4JMW4 Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC13K9BAC RepID=Q4JMW4_9BACT Length = 97 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 54/85 (63%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 +S+ +++ LK A+ +KP+V++G NGLT+ V+ EI+ AL+ HELIKV+ D++ +T Sbjct: 5 ISSNKRKELKKKAYTMKPIVMIGQNGLTDAVINEIDVALKTHELIKVRAKGSDKDERTKQ 64 Query: 63 VEAIVRETGACNVQVIGKTLVLYRP 87 I + A + IG VLYRP Sbjct: 65 CMKIKEKLNADIIHRIGFITVLYRP 89 >UniRef50_A8ZX30 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8ZX30_DESOH Length = 101 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 62/94 (65%), Gaps = 4/94 (4%) Query: 7 QKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVK-IATEDRETKTLIVEA 65 Q+++L+ LAH LKPVV +G G+T+ V+ I++AL+ HELIK+K +A ++++ K I+E Sbjct: 8 QRKYLRELAHSLKPVVSIGQKGITDAVIRTIDEALDTHELIKLKLLAFKEKDQKKEIIER 67 Query: 66 IVRETGACNVQVIGKTLVLYRPTKE---RKISLP 96 I E IG T +L+R ++ RKI+LP Sbjct: 68 IEVENKCEVAGTIGHTAILFRQHQDPEKRKITLP 101 >UniRef50_D1D4Q5 RNA-binding protein n=21 Tax=Neisseria RepID=D1D4Q5_NEIGO Length = 94 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/88 (43%), Positives = 52/88 (59%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+TK+ LK AH L PVV++G GLT+ V+ E + AL HELIKV++ +DR + I Sbjct: 6 LNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAALTAHELIKVRVFGDDRAERIEI 65 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE 90 + A V+ IGK LVL+R E Sbjct: 66 CNTLCEAVDAQPVRHIGKLLVLWRKNIE 93 >UniRef50_D1YMG0 RNA-binding protein, YhbY family n=3 Tax=Veillonella RepID=D1YMG0_9FIRM Length = 94 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ KQK++L+ LA + PVV +G NGL + V+ A+ ELIKVK+ E KT I Sbjct: 1 MTGKQKRYLRSLAATIPPVVQIGKNGLEDSVIDSARAAITARELIKVKLHNNSPEDKT-I 59 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + + GA VQVIG VLY+ KE KI LP+ Sbjct: 60 FQDLADMLGAELVQVIGFNGVLYKAKKEPKIILPK 94 >UniRef50_C4Z0A1 Putative RNA-binding protein containing KH domain n=20 Tax=Bacteria RepID=C4Z0A1_EUBE2 Length = 107 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 +++KQ+ +LKGLA + P+ G N LT A I +ALE ELIK+ + + I Sbjct: 13 MTSKQRAYLKGLAMTMDPIFQFGKNSLTPENTAAIAEALEARELIKISVLNNCADDPREI 72 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISLP 96 + + T + VQVIGK +VLY+ +K+ +KI LP Sbjct: 73 AQMVAERTRSQVVQVIGKKIVLYKESKDNKKIILP 107 >UniRef50_C8NFJ8 RNA-binding protein YhbY n=2 Tax=Granulicatella RepID=C8NFJ8_9LACT Length = 108 Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 3/98 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L K++Q K AH LKP+ +G GL+E ++ +I+ A+E ELIKV + E Sbjct: 1 MELKGKERQFFKKEAHSLKPIFQIGKGGLSEEMIHQIQNAVEKRELIKVTLLQNTLEEPQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLY---RPTKERKISL 95 E I TG+ +QVIG T+VLY R K R +S+ Sbjct: 61 EAAETIAEATGSTIIQVIGHTIVLYKEARNPKHRDLSV 98 >UniRef50_C9N0K7 RNA-binding protein YhbY n=4 Tax=Bacteria RepID=C9N0K7_9FUSO Length = 115 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 11/101 (10%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE-----D 55 + LS+K++ LK LAH L P+V +G +G+ E VL I + ++ ELIKVKI D Sbjct: 2 IQLSSKERAFLKKLAHNLDPIVRIGKDGIDENVLKSISEVVKKRELIKVKILQNSSVEFD 61 Query: 56 RETKTLIVEAIVRETGACNVQVIGKTLVLYRP--TKERKIS 94 RE T I ++T + V IG L+ ++P TK+ KI+ Sbjct: 62 REMAT----EIAQKTKSVFVDKIGSVLIFFKPKTTKDAKIT 98 >UniRef50_A5EXB7 YhbY family protein n=2 Tax=Cardiobacteriaceae RepID=A5EXB7_DICNV Length = 98 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ Q + LK AH L PV+L+G+ G T+ V EI AL+ HELIK+K+ + + Sbjct: 2 LNKTQIRFLKSTAHHLHPVILIGNQGTTQAVQREINTALDAHELIKIKLPPVTNNDQLTM 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER-KISLPR 97 ++ I+ A VQ IG ++YR ++ KI+LPR Sbjct: 62 IDEIITAQHAEFVQKIGHIAIIYRHNPQQPKITLPR 97 >UniRef50_C4FU95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU95_9FIRM Length = 117 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 48/87 (55%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +L+ KQ HLK +AH KP+ +G GL + L +++QAL ELIK K+ E Sbjct: 15 SLNKKQVNHLKKIAHHEKPIFQMGKEGLGQSFLDQVDQALTKRELIKFKVLQNSEEEIRE 74 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPT 88 + I A VQVIG T VLYRP+ Sbjct: 75 VTAEIAYALDAHVVQVIGHTGVLYRPS 101 >UniRef50_B1HUI3 UPF0044 protein n=9 Tax=Bacillales RepID=B1HUI3_LYSSC Length = 100 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+ AH L P+ +G G+ + + +I +ALE ELIKV+I E K + Sbjct: 2 LTGKQKRFLRAEAHHLSPIFQVGKGGVNDEMTKQIREALEVRELIKVRILDNCEEDKHEV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTK-ERKISLPR 97 EA+ + A VQ+IG T+VLY+ ++ ++KI LP+ Sbjct: 62 AEALAKGAHAELVQLIGLTVVLYKESRNQKKIVLPK 97 >UniRef50_B8FUR8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B8FUR8_DESHD Length = 97 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK L+ L + + P++ +G G+TE V+A+ ++ LE ELIK ++ E Sbjct: 2 LTGKQKGFLRSLGNEMDPILQIGKGGVTEAVIAQTDETLEARELIKGRVLPNSMEDVQSA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLPR 97 + T A VQVIG+ +LYR +K++ I LPR Sbjct: 62 AAELAERTSAELVQVIGRNFLLYRESKKKPMIDLPR 97 >UniRef50_B1KZR2 CRS1/YhbY domain protein n=24 Tax=Bacteria RepID=B1KZR2_CLOBM Length = 97 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++TKQ+ +L+ LA+ + + +G +GL + +L +I+ ALE ELIK+ + T Sbjct: 2 ITTKQRSYLRSLANKMDAIFQIGKDGLNDNLLKQIDDALEARELIKISVLKNSFYTAKEA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER-KISLPR 97 I E +Q IG +VLYR ++++ KI LP+ Sbjct: 62 SSEICEELNCEGIQCIGSKVVLYRKSRKKPKIELPQ 97 >UniRef50_C2CFN8 RNA binding protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2CFN8_9FIRM Length = 94 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 54/93 (58%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ+ LK AH KP++ +G +T+ ++ I++AL+ ELIK+KI + + + I Sbjct: 2 LTGKQRAFLKQEAHDFKPIINIGKFSVTDDLIKAIDEALQARELIKIKILNNNMDDQDEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 ++ I+ +T + + +G LYR ++ K L Sbjct: 62 IDTIIDKTSSEFISHLGSIFTLYRKNEDNKYGL 94 >UniRef50_B6BWT9 CRS1 / YhbY domain superfamily n=1 Tax=beta proteobacterium KB13 RepID=B6BWT9_9PROT Length = 95 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ + LK AH LK V +GS G+T V++EI + HELIK++I ++ ++ + I Sbjct: 2 LNNKQIKALKAEAHHLKTTVSVGSKGITNQVISEIANTINFHELIKIQIQSDTKQDRLEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYR-PTKERKISL 95 + I + T + VQ+IGK V+++ +E K S+ Sbjct: 62 AKQICQATESEFVQLIGKQAVIFKQKNEESKFSI 95 >UniRef50_Q03J88 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=75 Tax=Lactobacillales RepID=Q03J88_STRTD Length = 105 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 3/97 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M+L++KQ+ LK AH LKP+V +G NGL + + + AL+ ELIKV + E Sbjct: 1 MSLTSKQRAFLKSEAHTLKPIVQIGKNGLNDHIKTSVRNALDARELIKVTLLQNTMEDIH 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPT---KERKIS 94 + E + E G V IG+ L+LY+ + + RK+S Sbjct: 61 EVAEILEEEIGCDTVLKIGRILILYKESAKKENRKLS 97 >UniRef50_B4D0Q3 Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Q3_9BACT Length = 92 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ +K+ LK A L+PVV LG G+++ + +++AL H L+K+K A E KTL Sbjct: 5 LTNAEKRDLKAQAQRLEPVVKLGHGGMSDAFIHSLDEALNQHGLVKMKFADFKEEKKTLA 64 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE 90 + I TG+ V +G V YRP E Sbjct: 65 PQ-IAERTGSAIVMQVGNVAVFYRPKPE 91 >UniRef50_Q6AML8 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AML8_DESPS Length = 115 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 4/99 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++++K+ LKGLAH L V +G LT ++ + L+ HEL+KVKI K Sbjct: 17 LNSREKKFLKGLAHSLAVGVQIGKEDLTPSLIDATKLELDRHELVKVKIGKSSGLDKKEA 76 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE----RKISLPR 97 E + T + VQ+IGKT+VLY+ KE ++I LPR Sbjct: 77 SEKLPLLTESSFVQLIGKTIVLYKENKEIVKDKRIRLPR 115 >UniRef50_Q2IMK4 Putative uncharacterized protein n=5 Tax=Myxococcales RepID=Q2IMK4_ANADE Length = 187 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 1/88 (1%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 S+ ++ L+ H L PVV +G +GLTE VL ++++AL HEL+K+K+ TE E + I Sbjct: 15 SSPLRRALRAAGHHLSPVVQVGKDGLTEAVLRQLDEALLAHELVKMKVGTESPEDRLEIA 74 Query: 64 EAIVRETGACNVQVIGKTLVLYRPTKER 91 + ++ E QV+G+T++ YR ER Sbjct: 75 DRLLAEDVQV-AQVLGRTVLAYRRHPER 101 >UniRef50_Q38VT8 Putative uncharacterized protein n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38VT8_LACSS Length = 105 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK +L+GLA KP+ LG NGL+E +IE+A+E ELIK+ + T + Sbjct: 2 LTGKQKHYLRGLAQTTKPLFQLGKNGLSEAYFEQIEEAIEKRELIKINLLQTTEVTVDEL 61 Query: 63 VEAIVRETGACNV-QVIGKTLVLYRPTKERK 92 + + + Q IG+TLV+Y+ +++ K Sbjct: 62 ANFLKQHDNRIEIAQKIGRTLVIYKASRKEK 92 >UniRef50_D0LJW9 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJW9_HALO1 Length = 101 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 5/101 (4%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT----EDR 56 M L+ KQ++ L+ H L +V +G G++E + + AL+ HELIK+++ E + Sbjct: 1 MPLTGKQRRFLRARGHGLSAIVQMGKEGMSEAFVHAVSSALDDHELIKIRLGQNSLHETK 60 Query: 57 ETKTLIVEAIVRETGACNVQVIGKTLVLYRP-TKERKISLP 96 + E + R+T + QV+G TL+LYR +E +I LP Sbjct: 61 SDRRSTAEELARQTESEVAQVLGNTLLLYRRHPEEPRIELP 101 >UniRef50_B9MRC0 Putative uncharacterized protein n=2 Tax=Clostridia RepID=B9MRC0_ANATD Length = 95 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 8/92 (8%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKI----ATEDRET 58 L++KQ+ L+G+A+ + ++ +G G+TEGVL +I++AL ELIK+ + E +E Sbjct: 2 LTSKQRAKLRGMANTMDAIIRIGKEGITEGVLKQIDEALTARELIKIALEKNCEIEPKEA 61 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 I E + E VQVIG+ +V+YR ++E Sbjct: 62 IAYICEKLNAEP----VQVIGRKIVIYRMSEE 89 >UniRef50_C0QM00 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM00_DESAH Length = 102 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 4/98 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVK-IATEDRETKTL 61 L Q+++L+GLAH +KP +G GLT+ ++ EI +AL+ ELIKVK + +++ KT Sbjct: 4 LKGSQRKYLRGLAHDIKPSAFVGQKGLTDALVNEINEALDASELIKVKFVDYKEKTVKTS 63 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTK---ERKISLP 96 + + I T + +IG + YR K +R I +P Sbjct: 64 LAQEIETSTASHLAGLIGHVAIYYREHKNPEKRVIRIP 101 >UniRef50_B8CXY9 Putative uncharacterized protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXY9_HALOH Length = 96 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 51/93 (54%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ+ +L+ A+ L PV+ +G +G+T +L +++ AL+ HELIK ++ Sbjct: 2 LTGKQRSYLRSEANNLNPVIHIGKDGITPSLLNQVDAALDDHELIKCRVLKNSLGEPRSF 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 + I + VQVIG VL+R +E I + Sbjct: 62 ADEISSQLNCDVVQVIGNVFVLFRRNEEEPIYI 94 >UniRef50_B5JKD4 CRS1 / YhbY domain superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKD4_9BACT Length = 95 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 2/91 (2%) Query: 1 MNL-STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 MNL S+K+K L+G A LKP + +G NGL E V+ EI +A E ELIK+ E E + Sbjct: 1 MNLLSSKEKAELRGAAQRLKPAIHIGKNGLGEPVVLEIRKAFERDELIKIDFKAERPEIE 60 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 ++ +E I R+T + V +GK +R E Sbjct: 61 SMSLE-IERKTQSQCVGGVGKKRSFHRKMPE 90 >UniRef50_C2HJU9 RNA binding protein n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJU9_PEPMA Length = 96 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 55/94 (58%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ KQ+ LK ++H KP+V +G G++E L +I+ L E++K+KI + + + ++ Sbjct: 2 ITPKQRAKLKKISHGYKPLVNIGKGGISENTLKQIDDTLNKREVMKIKILNNNLDDRDML 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 ++ I+ + V+ +G L +YR ++ + I L Sbjct: 62 IDEILTKLDCEFVRYMGNILTIYRESENKVIDLD 95 >UniRef50_Q8TUY0 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=1 Tax=Methanopyrus kandleri RepID=Q8TUY0_METKA Length = 105 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE--DRETK 59 LS K+++ L+ A L PVV +G GLT GV+ E+++ LE LIKV+ R + Sbjct: 6 RLSGKERRALRARAVLLDPVVRIGKKGLTSGVIQEVDRQLEERGLIKVRFERNILRRYDR 65 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRP 87 + E + R+ A + V G+T VL+RP Sbjct: 66 KELAEELARKVNAELIDVRGRTAVLFRP 93 >UniRef50_A5TU14 Possible RNA binding protein n=8 Tax=Fusobacterium RepID=A5TU14_FUSNP Length = 99 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 53/88 (60%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 +++K++ LK AH L+P+V +G +GL + ++ I A+ ELIKVKI E KT+I Sbjct: 1 MNSKKRAFLKKKAHNLEPIVRIGKDGLNQNIVQSILDAIASRELIKVKILQNCEEEKTII 60 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE 90 ++ V ++G+T+++++ KE Sbjct: 61 YSKLMDIKDFEVVGMVGRTIIIFKENKE 88 >UniRef50_C3W9Y6 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3W9Y6_FUSMR Length = 101 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 55/91 (60%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L++K++ +L+ AH L +V +G G+T+ ++ I A+E ELIKVKI E K Sbjct: 1 MELTSKRRAYLRKKAHDLDALVRIGKEGVTDNLIQSILDAIESRELIKVKILQNCEEEKM 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 I+E + + V +IG+T++L++ K++ Sbjct: 61 EIMEQLSQCKEFEVVGIIGRTIILFKENKDK 91 >UniRef50_C9LL05 RNA-binding protein YhbY n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL05_9FIRM Length = 96 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQKQ+LK A VV +G G+T+ V+ + +AL ELIKVKI E Sbjct: 2 LTGKQKQYLKSTAVDFSAVVQIGKEGITDNVINSVTEALAARELIKVKINQNSAENIRKA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYR-PTKERKISLP 96 + + E+G VQ+IG+ +L++ K+ LP Sbjct: 62 AKLLSEESGCEIVQIIGRNCILFKQKDKKSHYDLP 96 >UniRef50_D2RB57 RNA-binding protein, YhbY family n=17 Tax=Actinobacteria (class) RepID=D2RB57_GARVA Length = 101 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 51/86 (59%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQ + L+ LA+ L P++ +G N +T+ + + ++ +++HEL+K + + Sbjct: 1 MALTKKQIKQLRALANTLSPLLYVGKNDITDAAVKQADETMQYHELMKCSVQDGSGLSAK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 +A+ ++ GA VQVIG VL+R Sbjct: 61 EAADALAQKLGAEVVQVIGNRFVLFR 86 >UniRef50_D1AKP9 Putative uncharacterized protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AKP9_SEBTE Length = 106 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 3/92 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKI--ATEDRET 58 M LS+KQ+ LK +AH L+PVV +G + +L I + ELIKVK+ +E Sbjct: 1 MKLSSKQRALLKKMAHDLEPVVRIGKGEVDGDLLESISNVINKRELIKVKVLQNSELDNM 60 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 K L E + +T + V IGK ++L++P KE Sbjct: 61 KDLGFE-LAEKTSSVFVDKIGKVIILFKPKKE 91 >UniRef50_B1ZUH5 Putative uncharacterized protein n=2 Tax=Opitutaceae RepID=B1ZUH5_OPITP Length = 102 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 L+ Q+ L+GL L+P + +G GLT +E+++ L HEL+K++ +R+ + Sbjct: 4 FPLTGAQRTFLRGLGQRLEPALKVGKGGLTPAFYSELQKQLRAHELVKLRFLGVERDERA 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPT---KERKISLP 96 + + I + V +G T + YR ER I+LP Sbjct: 64 SLCDEIADQGRCVCVGSVGHTALFYRQNPEPAERSIALP 102 >UniRef50_C8NZI1 RNA-binding protein YhbY n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZI1_ERYRH Length = 94 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 6/94 (6%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS QK+ LK ++H K V +G NGLTE V E ++ H L+KV I + + I Sbjct: 2 LSKDQKKELKRISHEEKTTVFIGKNGLTETVYETFETSMLAHNLVKVSI---QKNSDVTI 58 Query: 63 VEAI--VRETGACN-VQVIGKTLVLYRPTKERKI 93 +EA+ + +C+ V IG+ V YR +K +I Sbjct: 59 LEAVEAFEDRFSCDLVSKIGRVAVFYRFSKNGRI 92 >UniRef50_C2KVY9 RNA binding protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KVY9_9FIRM Length = 101 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 3/95 (3%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 +K + LKG A ++P + LG N +T + + + +E HEL+K+ + + + Sbjct: 7 DSKMRSALKGAAQKIEPTLSLGKNSITPEFIEAVREYMEKHELMKIHVLKNCIDDLRELG 66 Query: 64 EAIVRETGACNVQVIGKTLVLYRPTKE---RKISL 95 I +G VQ+IG+ +VLY+P KE RK SL Sbjct: 67 NTIAERSGTELVQIIGRMIVLYKPAKEEKDRKFSL 101 >UniRef50_C7TK22 RNA-binding protein n=8 Tax=Lactobacillus RepID=C7TK22_LACRL Length = 103 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 4/97 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK++L+ LA KP++ +G NGL + +A ++ A+E EL+K+ + +T + Sbjct: 2 LTGKQKRYLRSLAMTTKPLIQVGKNGLGDAFVAGVKDAIETRELVKISLLPTADDTPQEV 61 Query: 63 VEAIVRETGACNV-QVIGKTLVLYR---PTKERKISL 95 + + V Q+IG+T+++Y+ ++ R+ISL Sbjct: 62 ADTLQAAIAGLEVAQIIGRTVIVYKQAEKSEHRRISL 98 >UniRef50_C6JNB7 Putative uncharacterized protein n=5 Tax=Fusobacterium RepID=C6JNB7_FUSVA Length = 102 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 58/91 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L++KQ+ LK AH L P+V +G +G+TE ++ I +A++ EL+KVKI + K Sbjct: 1 MALTSKQRAFLKKKAHELNPLVRIGKDGVTESLIQSILEAIDSRELLKVKILQNCEKEKE 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 ++E + + + V +IG+T++L+R +++ Sbjct: 61 EVLEELSKCSEFEIVGIIGRTIILFRENRDK 91 >UniRef50_B8DU23 Putative uncharacterized protein n=5 Tax=Actinobacteria (class) RepID=B8DU23_BIFA0 Length = 101 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 49/88 (55%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQ + L+ +A+ LKP+V +G L++ V+ + ++ +E ELIKV++ Sbjct: 1 MALTKKQVRQLRAMANQLKPLVQIGKGDLSDNVIKQADETIEKRELIKVQVLDGSGIDAK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPT 88 + + GA VQVIG VLYR + Sbjct: 61 EAAQGLADRMGAEVVQVIGNRAVLYRRS 88 >UniRef50_B9XGY3 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XGY3_9BACT Length = 85 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 18 LKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQV 77 ++P++ +G GL+E L +++AL HHEL+K+K A E KTL + + +T + V Sbjct: 1 MEPILKVGKAGLSEAFLKSVDEALAHHELVKIKFADFKEEKKTLSPQ-LAEKTSSHLVMR 59 Query: 78 IGKTLVLYRPTKE 90 +G +VLYR E Sbjct: 60 VGNVVVLYRKKAE 72 >UniRef50_B7C8W0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8W0_9FIRM Length = 96 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVK-IATEDRETKTL 61 L+++ K++L+ L K + +G +GL++ ++ + +LE HEL+K + T + + Sbjct: 2 LTSQNKKYLRKLGMDYKSLFQIGKDGLSDNLMDTLSDSLEAHELVKCNLLKTCPVDVREA 61 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 +E TG+ V ++G T +LYR +KE K+ L + Sbjct: 62 AIEC-ASATGSEVVHIVGHTFLLYRRSKENKLGLKK 96 >UniRef50_C9XNP1 Putative uncharacterized protein n=7 Tax=Clostridiaceae RepID=C9XNP1_CLODC Length = 122 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKI----ATEDRET 58 L KQ+ +L+ LA+ LKP +G G+TE L +++ L EL+KV I + +ET Sbjct: 2 LKGKQRAYLRSLANTLKPTTQIGKEGVTESFLEQLDGMLRTRELVKVTILENAGLDTKET 61 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLY-RPTKERKISLP 96 + EA+ E VQ IG +Y R +E KI P Sbjct: 62 ANAVCEALRAEF----VQAIGFKFTIYKRNIEEPKILFP 96 >UniRef50_D2MM12 RNA-binding protein, YhbY family n=1 Tax=Bulleidia extructa W1219 RepID=D2MM12_9FIRM Length = 97 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 2/98 (2%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE-DRETK 59 M L+ KQK +L+ LA K G +GL++ + I+ A ELIK+ + + + K Sbjct: 1 MILTPKQKAYLRSLAQTEKAKFQCGKDGLSDTFIELIQNAFHTRELIKIHVLKGLEVDVK 60 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 L +E I T + VQ+IG+ +VLY+ K +I LPR Sbjct: 61 ELALE-IAHYTKSEVVQIIGRQVVLYKAMKTPRIVLPR 97 >UniRef50_Q58068 Probable RNA-binding protein MJ0652 n=11 Tax=Methanococcales RepID=Y652_METJA Length = 134 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKI--ATEDRETK 59 L+ K K+ L+ AH L+PVV +G G +E V+ E+++ L+ LIKVK+ A E K Sbjct: 12 KLTGKMKRMLRAKAHHLEPVVWVGKEG-SEKVIKEVDRQLKERGLIKVKVRKAALLYEDK 70 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRP 87 I E + + A V V+G + L+RP Sbjct: 71 YEIAEKLAKACDAEVVSVVGHVITLFRP 98 >UniRef50_A9S9R6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S9R6_PHYPA Length = 274 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVVLL---GSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L K+K+ L+ AH L + + G GLT + I ALE +ELIK+++ E Sbjct: 144 LGNKEKKELRAYAHQLGNDICIHQVGKWGLTANCITAISDALEANELIKIRVLDNLDEEL 203 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPT 88 + +TGA V +G+TL+LYRP+ Sbjct: 204 ADTASKLESKTGAQIVGKMGRTLLLYRPS 232 >UniRef50_Q2S2W7 CRS1 / YhbY domain superfamily n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2W7_SALRD Length = 107 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 6/98 (6%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+++Q+ HL+ AH P+V +G G+T+ V+ +E+A EL+ +++ + Sbjct: 5 LTSRQRAHLRSEAHGQDPLVHIGKEGVTDPVMQAVEEAFNTRELVTIRVLDNAPRPVREV 64 Query: 63 VEAIVRETGACNVQV---IGKTLVLYRP-TKERKISLP 96 EA+ +VQV IG T + YRP + +I LP Sbjct: 65 AEAVA--DALEDVQVVRTIGGTALFYRPHPDDPEIDLP 100 >UniRef50_D1AXZ7 Putative uncharacterized protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AXZ7_STRM9 Length = 112 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 52/90 (57%), Gaps = 1/90 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL- 61 +++K++ L+ AH L+PVV +G GLT+ V+ I+ +E +EL+KVK+ E + Sbjct: 1 MNSKERNFLRKRAHGLEPVVRVGKEGLTDMVIESIKSYIEKNELMKVKLLQNSLEDVNIE 60 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKER 91 ++ I + V +GK ++ ++ +++ Sbjct: 61 LINEIETKAKCFFVGSVGKVMIFFKEKRDK 90 >UniRef50_D1PPV8 Transcription-repair coupling factor n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPV8_9FIRM Length = 99 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 8/88 (9%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATED----RET 58 L++KQ+ L+G A+ L PV +G + E ++ + L ELIKVK+ RE Sbjct: 2 LNSKQRAALRGAANTLDPVFQIGKGEIDETLIQGVGDCLAARELIKVKVLENSEYSAREA 61 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYR 86 ++ EA+ + C VQVIG+ VL++ Sbjct: 62 ANILAEAL---SADC-VQVIGRKFVLFK 85 >UniRef50_C8QYL8 Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYL8_9DELT Length = 157 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 2/89 (2%) Query: 11 LKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRET 70 L+ H L P V++G GLT VLA +E L HEL+K+KI E KT + + + ++ Sbjct: 17 LRAQGHHLNPTVMVGREGLTAAVLAALEAVLTAHELVKIKIQEGCPEDKTTVAQQLAADS 76 Query: 71 GACNVQVIGKTLVLYR--PTKERKISLPR 97 + VQ+IG T++LYR P +R PR Sbjct: 77 NSRIVQIIGGTILLYRRLPPAKRHSDGPR 105 >UniRef50_UPI0001A7B00B RNA binding n=1 Tax=Arabidopsis thaliana RepID=UPI0001A7B00B Length = 222 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 9/94 (9%) Query: 1 MNLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE 57 + LS K+K+ L AH L + L+G +G+T+ V+ + LE +EL+KVKI R Sbjct: 117 LELSAKEKRKLASYAHHLGDKLKSQLVGKSGVTDSVVLSFVETLEKNELLKVKI---HRT 173 Query: 58 TKTLIVEAIVR---ETGACNVQVIGKTLVLYRPT 88 + + I+R TG+ +V I +T++LYRP+ Sbjct: 174 CPGELEDMILRLEEATGSVSVGQIARTVILYRPS 207 >UniRef50_D1IXC2 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1IXC2_VITVI Length = 287 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 3/91 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE 57 +NL+ K+K+ L AH L + L+G G+T V + + LE +EL+K+KI Sbjct: 143 VNLTIKEKKELASYAHSLGKKLKCQLVGKQGVTASVASAFIENLESNELLKIKIHGTCPG 202 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 +V+ + TG+ V IG++++LYRP+ Sbjct: 203 ELPDVVKQLEESTGSVVVGQIGRSVILYRPS 233 >UniRef50_C6TB79 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TB79_SOYBN Length = 260 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 +LS K+++ L AH L + L+G +G+T + + LE +EL+K+KI Sbjct: 120 SLSVKERKELASYAHSLGDKLKTQLVGKSGVTPNLATSFIETLEANELLKIKIHRTCPGE 179 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 +V+ + TG+ V IG+T ++YRP+ Sbjct: 180 LDDVVKQLEEATGSVAVGQIGRTFIIYRPS 209 >UniRef50_C0PR74 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=C0PR74_PICSI Length = 249 Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 3/89 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L+ K+K+ L AH L + +G +G+T V I ALE +ELIK+K+ + Sbjct: 129 LTVKEKKELSAYAHSLGKKLKCHQVGKSGVTSSVEVSISDALEANELIKLKVHNTCPDEL 188 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPT 88 + + T + V IG+T +LYRP+ Sbjct: 189 DAVASRLQETTRSVVVGQIGRTFILYRPS 217 >UniRef50_B9HRH4 Predicted protein (Fragment) n=4 Tax=rosids RepID=B9HRH4_POPTR Length = 99 Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 3/89 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L+ K+K+ L AH L + L+G +G T+ V + LE +EL+K+KI Sbjct: 1 LTVKEKKELASYAHGLGKKLKSQLIGKSGFTDNVATSFIETLEANELLKIKIHRTCPGEL 60 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPT 88 +V + TG+ V IG+T+++YRP+ Sbjct: 61 EDVVRRLEEATGSVVVGQIGRTVIIYRPS 89 >UniRef50_A8TFT3 Putative uncharacterized protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFT3_METVO Length = 132 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 5/88 (5%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKI---ATEDRETK 59 +++K K+ L+ + ++PVV +G G+ E V+ E+ + L+ LIK+KI A E E K Sbjct: 10 ITSKAKKILRSQSQSIEPVVWVGKEGV-EKVIEEVRRQLKDKSLIKIKIRRSAIEGME-K 67 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRP 87 I + I T + V ++G + L++P Sbjct: 68 DEIAKIITDSTDSEVVSIVGNVITLFKP 95 >UniRef50_Q9FW07 Os10g0512500 protein n=2 Tax=Oryza sativa RepID=Q9FW07_ORYSJ Length = 252 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 LS K+++ L AH L + +G G+T V+A LE +EL+K+KI Sbjct: 102 LSVKERKELASYAHGLGKRLKSQQVGKGGVTPSVVAAFNDNLESNELLKLKIHLNCPGEL 161 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPT 88 ++ + TG+ V IG++++LYRP+ Sbjct: 162 PDVILQLEESTGSIAVDQIGRSVILYRPS 190 >UniRef50_Q0W1M5 Putative uncharacterized protein n=2 Tax=Euryarchaeota RepID=Q0W1M5_UNCMA Length = 87 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 51/86 (59%), Gaps = 2/86 (2%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET--KT 60 + TK+ L+G+A ++ +G NG+T ++ E+ + L+ ++L+KVK+ E K Sbjct: 1 MDTKKILELRGMAARMEASTHIGKNGVTPSLIEEVSRQLKDNKLVKVKVLKSAFEEMPKE 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 I + + +TG+ ++V G T+VL++ Sbjct: 61 EIAKLLAEKTGSELIEVKGNTIVLFK 86 >UniRef50_C9KQ51 CRS1 / YhbY domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ51_9FIRM Length = 84 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 18 LKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQV 77 L+PVV +G G+T V+ +A++ ELIKV++ E + + A VQV Sbjct: 5 LEPVVQIGKEGVTPSVVQAAREAIKKRELIKVRVLQNCMELPADAIAMVAERADANLVQV 64 Query: 78 IGKTLVLYRPTKER-KISLP 96 IG+ +L++ E+ KI LP Sbjct: 65 IGRNGLLFKRNFEKPKIELP 84 >UniRef50_B6T8H1 CRS1 / YhbY domain containing protein n=5 Tax=Poaceae RepID=B6T8H1_MAIZE Length = 259 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 LS K+++ L AH L + +G +G+T +++ LE +EL+K+KI Sbjct: 96 LSVKERKELASYAHGLGKKLKSQQVGKSGVTPNLVSAFSDNLESNELLKLKIHGNCPGEL 155 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPT 88 ++ + TG+ V IG++++LYRP+ Sbjct: 156 PDVILQLEESTGSIAVDQIGRSVILYRPS 184 >UniRef50_Q4JCL7 Conserved protein n=2 Tax=Sulfolobus RepID=Q4JCL7_SULAC Length = 87 Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 20 PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIG 79 P + +G GL EG++ EI++ L+ H+++K++I D E + + + + A ++V G Sbjct: 15 PDIRIGKKGLNEGMVNEIKRRLKEHKVVKIRIGA-DVEDRKSFAKEVADKVNAKLIEVRG 73 Query: 80 KTLVLYRPTKERKI 93 T +L + K+ ++ Sbjct: 74 YTFILAKEDKDDQV 87 >UniRef50_A7C1L1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C1L1_9GAMM Length = 67 Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%) Query: 33 VLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYR 86 +LA+++ LE HELIK++IA D+ + I E + + + A VQ+IG+ +LYR Sbjct: 1 MLAQLDCVLEDHELIKIRIAA-DKAERHKITEELCQASHAELVQIIGRVSILYR 53 >UniRef50_A2BN52 Conserved archaeal protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BN52_HYPBU Length = 120 Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 12/74 (16%) Query: 22 VLLGSNGLTEGVLAEIEQALEHHELIKVK--------IATEDRETKTLIVEAIVRETGAC 73 V++G GLTE VL EI++ L+ ++KVK + RE + E + A Sbjct: 19 VIIGKKGLTEAVLKEIDRRLKEKGIVKVKALKSAIKVTGLDRRELAKTVAERL----NAR 74 Query: 74 NVQVIGKTLVLYRP 87 + V G+T VLYRP Sbjct: 75 LLDVRGRTFVLYRP 88 >UniRef50_UPI0001698ED9 hypothetical protein Epers_16139 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698ED9 Length = 52 Score = 39.7 bits (91), Expect = 0.033, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 47 IKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 IKVK+A D+ + + AI ++GA VQ+IG+ + YR E+K Sbjct: 1 IKVKLAGADKAEREQLSSAITEQSGAALVQIIGRVAIFYRANPEKK 46 >UniRef50_C1AC38 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC38_GEMAT Length = 99 Score = 39.3 bits (90), Expect = 0.039, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 8/92 (8%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT----EDRET 58 ++ K + L+ AH L V +G GLT ++ + L H L+KV++A ++ Sbjct: 1 MTGKTRAALRAEAHHLDVHVHIGHAGLTPSLMQSFDDVLRTHMLVKVQVAKGGELSAKDA 60 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 EA+ E +QVIG+T +YR E Sbjct: 61 ANQSAEALKAEV----IQVIGRTFAVYRENPE 88 >UniRef50_Q8U0T5 Putative uncharacterized protein n=1 Tax=Pyrococcus furiosus RepID=Q8U0T5_PYRFU Length = 139 Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT----EDRE 57 L K ++ L+ + ++P +G GL E V+ EIE L ++KV+I + Sbjct: 5 RLPGKIRRALRARYYDIEPKAWIGKRGLEESVIKEIENQLARTGVLKVEIRKGALIATKM 64 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYRP 87 T+ I E + T + ++V GK +L++P Sbjct: 65 TRKQIAEKVAELTDSELLEVRGKRFILFKP 94 >UniRef50_Q9YD21 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix RepID=Q9YD21_AERPE Length = 107 Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Query: 15 AHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKI----ATEDRETKTLIVEAIVRET 70 AH + V++G G+T VL EI+ LE E++KVK+ + + + + Sbjct: 11 AHHGRADVIIGKAGVTREVLREIDARLEKKEVVKVKMLKTALKREEGGRRELARRVAGSL 70 Query: 71 GACNVQVIGKTLVLYRPTK 89 GA + V G T +LYRP + Sbjct: 71 GARLMGVRGYTFILYRPRR 89 >UniRef50_A1RYP6 Putative uncharacterized protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RYP6_THEPD Length = 112 Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 25/42 (59%) Query: 20 PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 PVV +G GL EGV+ EI LE ++KVK+ RET L Sbjct: 38 PVVNVGKKGLDEGVIEEINNILESRGIVKVKLLKNFRETYGL 79 >UniRef50_A3DNH0 Putative uncharacterized protein n=2 Tax=Desulfurococcaceae RepID=A3DNH0_STAMF Length = 122 Score = 38.1 bits (87), Expect = 0.097, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 12/73 (16%) Query: 22 VLLGSNGLTEGVLAEIEQALEHHELIKVKI--------ATEDRETKTLIVEAIVRETGAC 73 V LG GLT+G + E++ LE H ++K+++ T+ RET +I + + GA Sbjct: 29 VQLGKKGLTQGFINEVKARLEKHGVVKIRMLKSYVKSTNTDRRETAKIIAKVL----GAK 84 Query: 74 NVQVIGKTLVLYR 86 ++V G T ++ R Sbjct: 85 LIEVRGYTFIIAR 97 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C1D4U0 CRS1_YhbY domain containing protein n=15 Tax=Pro... 134 8e-31 UniRef50_D0KVG6 Putative uncharacterized protein n=1 Tax=Halothi... 132 2e-30 UniRef50_P71376 RNA-binding protein HI1333 n=269 Tax=Proteobacte... 132 5e-30 UniRef50_C7R8L3 Putative uncharacterized protein n=1 Tax=Kangiel... 128 6e-29 UniRef50_Q3SJR6 Putative uncharacterized protein n=2 Tax=Proteob... 126 2e-28 UniRef50_Q39US9 Putative uncharacterized protein n=5 Tax=Geobact... 126 3e-28 UniRef50_P54454 Probable RNA-binding protein yqeI n=17 Tax=Firmi... 126 3e-28 UniRef50_B7GKA7 Predicted RNA-binding protein containing KH doma... 126 3e-28 UniRef50_Q1K0N8 Putative uncharacterized protein n=1 Tax=Desulfu... 125 4e-28 UniRef50_B8CXY9 Putative uncharacterized protein n=1 Tax=Halothe... 125 4e-28 UniRef50_B8FUR8 Putative uncharacterized protein n=4 Tax=Clostri... 121 8e-27 UniRef50_A8VU66 Cation antiporter n=4 Tax=Bacillales RepID=A8VU6... 120 1e-26 UniRef50_B5JX32 Putative uncharacterized protein n=1 Tax=gamma p... 120 2e-26 UniRef50_Q3BUR9 Putative uncharacterized protein n=20 Tax=Xantho... 120 2e-26 UniRef50_B6BX40 CRS1 / YhbY domain superfamily n=2 Tax=Nitrosoco... 119 2e-26 UniRef50_C5SEC6 Putative uncharacterized protein n=1 Tax=Allochr... 119 3e-26 UniRef50_B9ZLQ7 Putative uncharacterized protein n=1 Tax=Thioalk... 119 3e-26 UniRef50_B1HUI3 UPF0044 protein n=9 Tax=Bacillales RepID=B1HUI3_... 118 4e-26 UniRef50_C3RQM1 Cation antiporter n=5 Tax=Bacteria RepID=C3RQM1_... 118 6e-26 UniRef50_B3E4L2 Putative uncharacterized protein n=6 Tax=Deltapr... 118 7e-26 UniRef50_Q0A767 Putative uncharacterized protein n=2 Tax=Ectothi... 117 1e-25 UniRef50_A1WXX4 Putative uncharacterized protein n=1 Tax=Halorho... 117 1e-25 UniRef50_D0LJW9 Putative uncharacterized protein n=1 Tax=Haliang... 116 2e-25 UniRef50_C4Z0A1 Putative RNA-binding protein containing KH domai... 116 2e-25 UniRef50_C6MBV6 Putative uncharacterized protein n=1 Tax=Nitroso... 116 2e-25 UniRef50_A6T082 Uncharacterized conserved protein n=4 Tax=Betapr... 116 3e-25 UniRef50_Q82WX8 Uncharacterized protein family UPF0044 n=2 Tax=N... 115 4e-25 UniRef50_UPI0000E87C63 hypothetical protein MB2181_02825 n=1 Tax... 115 4e-25 UniRef50_C9YA67 RNA-binding protein HI1333 n=10 Tax=Betaproteoba... 115 5e-25 UniRef50_C2CFN8 RNA binding protein n=5 Tax=Clostridiales Family... 115 5e-25 UniRef50_D1YMG0 RNA-binding protein, YhbY family n=3 Tax=Veillon... 115 7e-25 UniRef50_B1KZR2 CRS1/YhbY domain protein n=24 Tax=Bacteria RepID... 114 8e-25 UniRef50_Q31HG7 Putative uncharacterized protein n=1 Tax=Thiomic... 114 9e-25 UniRef50_Q47HI3 Putative uncharacterized protein n=7 Tax=Betapro... 113 1e-24 UniRef50_P95453 Probable RNA-binding protein PA4753 n=18 Tax=Gam... 113 2e-24 UniRef50_A9HYV3 Putative uncharacterized protein n=5 Tax=Bordete... 113 2e-24 UniRef50_Q607B1 Putative uncharacterized protein n=1 Tax=Methylo... 113 2e-24 UniRef50_B1XUM7 Putative uncharacterized protein n=2 Tax=Polynuc... 113 2e-24 UniRef50_D1D4Q5 RNA-binding protein n=21 Tax=Neisseria RepID=D1D... 113 3e-24 UniRef50_A6EYL2 Predicted RNA-binding protein containing KH doma... 112 3e-24 UniRef50_C8NFJ8 RNA-binding protein YhbY n=2 Tax=Granulicatella ... 112 4e-24 UniRef50_D1KBJ6 RNA-binding protein n=3 Tax=Gammaproteobacteria ... 112 4e-24 UniRef50_B1ZUH5 Putative uncharacterized protein n=2 Tax=Opituta... 112 4e-24 UniRef50_A5EXB7 YhbY family protein n=2 Tax=Cardiobacteriaceae R... 111 8e-24 UniRef50_C4KVI2 CRS1 n=80 Tax=Betaproteobacteria RepID=C4KVI2_BURPS 111 9e-24 UniRef50_B2V0A9 CRS1/YhbY domain protein n=22 Tax=Firmicutes Rep... 110 1e-23 UniRef50_A0LDZ2 Putative uncharacterized protein n=2 Tax=Proteob... 110 1e-23 UniRef50_Q5P1G1 Predicted RNA-binding protein containing KH doma... 110 2e-23 UniRef50_C3W9Y6 Putative uncharacterized protein n=1 Tax=Fusobac... 110 2e-23 UniRef50_D1VUN4 RNA-binding protein YhbY n=1 Tax=Peptoniphilus l... 110 2e-23 UniRef50_C2HJU9 RNA binding protein n=3 Tax=Clostridiales Family... 109 2e-23 UniRef50_C8PXU7 23S rRNA methyltransferase J n=4 Tax=Moraxellace... 109 3e-23 UniRef50_Q03J88 Predicted RNA-binding protein containing KH doma... 108 4e-23 UniRef50_B7C8W0 Putative uncharacterized protein n=1 Tax=Eubacte... 108 4e-23 UniRef50_A0Z550 Predicted RNA-binding protein containing KH doma... 108 4e-23 UniRef50_D2MM12 RNA-binding protein, YhbY family n=1 Tax=Bulleid... 108 5e-23 UniRef50_B9MRC0 Putative uncharacterized protein n=2 Tax=Clostri... 108 7e-23 UniRef50_C7RKS5 Putative uncharacterized protein n=1 Tax=Candida... 108 7e-23 UniRef50_Q2S2W7 CRS1 / YhbY domain superfamily n=1 Tax=Salinibac... 108 8e-23 UniRef50_Q03GA6 RNA-binding protein, KH domain n=26 Tax=Lactobac... 108 8e-23 UniRef50_Q1DDA8 Putative uncharacterized protein n=1 Tax=Myxococ... 107 9e-23 UniRef50_B8DU23 Putative uncharacterized protein n=5 Tax=Actinob... 107 1e-22 UniRef50_B2HXD4 Predicted RNA-binding protein containing KH doma... 106 1e-22 UniRef50_B5ENR6 Putative uncharacterized protein n=2 Tax=Acidith... 106 2e-22 UniRef50_C0PR74 Putative uncharacterized protein n=1 Tax=Picea s... 106 2e-22 UniRef50_C9LL05 RNA-binding protein YhbY n=1 Tax=Dialister invis... 106 2e-22 UniRef50_B4X4Q0 CRS1 / YhbY domain superfamily n=2 Tax=Alcanivor... 106 2e-22 UniRef50_C5BQ04 RNA-binding protein, translation initiation fact... 106 2e-22 UniRef50_C9XNP1 Putative uncharacterized protein n=7 Tax=Clostri... 106 3e-22 UniRef50_Q1MZR4 Putative uncharacterized protein n=3 Tax=Gammapr... 105 4e-22 UniRef50_A8ZX30 Putative uncharacterized protein n=2 Tax=Bacteri... 105 5e-22 UniRef50_A9B571 Putative uncharacterized protein n=1 Tax=Herpeto... 105 5e-22 UniRef50_C4FU95 Putative uncharacterized protein n=1 Tax=Catonel... 104 7e-22 UniRef50_A6GAH3 Putative uncharacterized protein n=1 Tax=Plesioc... 104 8e-22 UniRef50_A9S9R6 Predicted protein n=1 Tax=Physcomitrella patens ... 104 1e-21 UniRef50_A0Q5D2 RNA-binding protein n=21 Tax=Gammaproteobacteria... 103 1e-21 UniRef50_D2RB57 RNA-binding protein, YhbY family n=17 Tax=Actino... 103 2e-21 UniRef50_Q0EZJ5 Putative uncharacterized protein n=1 Tax=Maripro... 103 2e-21 UniRef50_Q2IMK4 Putative uncharacterized protein n=5 Tax=Myxococ... 102 3e-21 UniRef50_D1PPV8 Transcription-repair coupling factor n=1 Tax=Sub... 102 4e-21 UniRef50_C6JNB7 Putative uncharacterized protein n=5 Tax=Fusobac... 101 5e-21 UniRef50_Q4JMW4 Putative uncharacterized protein n=1 Tax=uncultu... 101 9e-21 UniRef50_C6NUK8 Putative uncharacterized protein n=1 Tax=Acidith... 100 1e-20 UniRef50_B6BWT9 CRS1 / YhbY domain superfamily n=1 Tax=beta prot... 100 1e-20 UniRef50_A9WDQ0 Putative uncharacterized protein n=2 Tax=Chlorof... 100 1e-20 UniRef50_C5V7C4 Putative uncharacterized protein n=2 Tax=Gallion... 100 2e-20 UniRef50_C9N0K7 RNA-binding protein YhbY n=4 Tax=Bacteria RepID=... 100 2e-20 UniRef50_C0QM00 Putative uncharacterized protein n=1 Tax=Desulfo... 100 3e-20 UniRef50_A5TU14 Possible RNA binding protein n=8 Tax=Fusobacteri... 100 3e-20 UniRef50_UPI0001A7B00B RNA binding n=1 Tax=Arabidopsis thaliana ... 99 4e-20 UniRef50_B4D0Q3 Putative uncharacterized protein n=1 Tax=Chthoni... 99 4e-20 UniRef50_C6TB79 Putative uncharacterized protein n=1 Tax=Glycine... 98 9e-20 UniRef50_C7TK22 RNA-binding protein n=8 Tax=Lactobacillus RepID=... 98 1e-19 UniRef50_C2KVY9 RNA binding protein n=1 Tax=Oribacterium sinus F... 97 2e-19 UniRef50_Q6AML8 Putative uncharacterized protein n=1 Tax=Desulfo... 97 2e-19 UniRef50_Q38VT8 Putative uncharacterized protein n=1 Tax=Lactoba... 95 5e-19 UniRef50_Q8TUY0 Predicted RNA-binding protein containing KH doma... 95 6e-19 UniRef50_D1IXC2 Whole genome shotgun sequence of line PN40024, s... 95 7e-19 UniRef50_D1AXZ7 Putative uncharacterized protein n=1 Tax=Strepto... 95 9e-19 UniRef50_C8NZI1 RNA-binding protein YhbY n=1 Tax=Erysipelothrix ... 93 2e-18 UniRef50_D1AKP9 Putative uncharacterized protein n=1 Tax=Sebalde... 92 4e-18 UniRef50_B9HRH4 Predicted protein (Fragment) n=4 Tax=rosids RepI... 92 7e-18 UniRef50_Q58068 Probable RNA-binding protein MJ0652 n=11 Tax=Met... 90 3e-17 UniRef50_C8QYL8 Putative uncharacterized protein n=1 Tax=Desulfu... 88 7e-17 UniRef50_B5JKD4 CRS1 / YhbY domain superfamily n=1 Tax=Verrucomi... 84 1e-15 UniRef50_B9XGY3 Putative uncharacterized protein n=1 Tax=bacteri... 79 4e-14 Sequences not found previously or not previously below threshold: UniRef50_B6T8H1 CRS1 / YhbY domain containing protein n=5 Tax=Po... 93 2e-18 UniRef50_C1AC38 Putative uncharacterized protein n=1 Tax=Gemmati... 92 6e-18 UniRef50_Q9FW07 Os10g0512500 protein n=2 Tax=Oryza sativa RepID=... 91 8e-18 UniRef50_C9KQ51 CRS1 / YhbY domain protein n=1 Tax=Mitsuokella m... 91 1e-17 UniRef50_C4V0X4 RNA binding protein n=2 Tax=Selenomonas RepID=C4... 79 5e-14 UniRef50_A8TFT3 Putative uncharacterized protein n=1 Tax=Methano... 74 1e-12 UniRef50_B9RHB6 Putative uncharacterized protein n=1 Tax=Ricinus... 73 3e-12 UniRef50_Q0W1M5 Putative uncharacterized protein n=2 Tax=Euryarc... 70 3e-11 UniRef50_A8ICQ7 Predicted protein n=1 Tax=Chlamydomonas reinhard... 67 1e-10 UniRef50_Q12W46 RNA-binding protein n=4 Tax=Methanosarcinaceae R... 63 2e-09 UniRef50_C1VAK9 Predicted RNA-binding protein containing KH doma... 63 2e-09 UniRef50_A6DTJ2 Putative uncharacterized protein n=1 Tax=Lentisp... 63 3e-09 UniRef50_A2BN52 Conserved archaeal protein n=1 Tax=Hyperthermus ... 62 8e-09 UniRef50_Q9P9D4 RNA-binding protein n=1 Tax=uncultured marine gr... 60 2e-08 UniRef50_A7C1L1 Putative uncharacterized protein n=1 Tax=Beggiat... 60 2e-08 UniRef50_C6A1U4 Predicted RNA-binding protein, CRS1/YhbY family ... 59 4e-08 UniRef50_Q9YD21 Putative uncharacterized protein n=1 Tax=Aeropyr... 59 5e-08 UniRef50_A5UL37 RNA-binding protein, CRS1/YhbY family n=4 Tax=Me... 59 5e-08 UniRef50_Q8U0T5 Putative uncharacterized protein n=1 Tax=Pyrococ... 59 6e-08 UniRef50_UPI0001C41D91 RNA-binding protein n=1 Tax=Methanobrevib... 58 8e-08 UniRef50_A3CX00 Putative uncharacterized protein n=2 Tax=Methano... 57 2e-07 UniRef50_A1RYP6 Putative uncharacterized protein n=1 Tax=Thermof... 57 2e-07 UniRef50_D2RG85 Putative uncharacterized protein n=1 Tax=Archaeo... 55 8e-07 UniRef50_Q74MX7 NEQ428 n=1 Tax=Nanoarchaeum equitans RepID=Q74MX... 53 4e-06 UniRef50_UPI0001698ED9 hypothetical protein Epers_16139 n=1 Tax=... 52 5e-06 UniRef50_Q2FTK1 RNA-binding protein containing KH domain possibl... 52 5e-06 UniRef50_Q4JCL7 Conserved protein n=2 Tax=Sulfolobus RepID=Q4JCL... 52 6e-06 UniRef50_D2RYN4 Putative uncharacterized protein n=1 Tax=Haloter... 52 7e-06 UniRef50_O28209 Putative uncharacterized protein n=1 Tax=Archaeo... 50 2e-05 UniRef50_A3DNH0 Putative uncharacterized protein n=2 Tax=Desulfu... 50 3e-05 UniRef50_Q0JCK3 Os04g0464800 protein n=10 Tax=Poaceae RepID=Q0JC... 50 3e-05 UniRef50_D1INN2 Whole genome shotgun sequence of line PN40024, s... 47 1e-04 UniRef50_C8SBP0 Putative uncharacterized protein n=1 Tax=Ferrogl... 47 2e-04 UniRef50_A8MR13 Uncharacterized protein At4g31010.2 n=1 Tax=Arab... 46 3e-04 UniRef50_Q9SGI0 T13O15.1 protein n=2 Tax=Arabidopsis thaliana Re... 46 3e-04 UniRef50_Q9LS51 Gb|AAF24608.1 n=7 Tax=Magnoliophyta RepID=Q9LS51... 46 3e-04 UniRef50_Q8VYD9 CRS2-associated factor 1, mitochondrial n=8 Tax=... 46 4e-04 UniRef50_Q5JK63 cDNA clone:J013093H11, full insert sequence n=8 ... 45 5e-04 UniRef50_A9SZH0 Predicted protein n=2 Tax=Physcomitrella patens ... 45 5e-04 UniRef50_Q5JK62 Group II intron splicing factor CRS1-like n=5 Ta... 45 7e-04 UniRef50_Q84N49 CRS2-associated factor 1, chloroplastic n=3 Tax=... 45 9e-04 UniRef50_Q2R1U8 CRS1/YhbY domain containing protein, expressed n... 44 0.002 UniRef50_C5XAP2 Putative uncharacterized protein Sb02g022940 n=1... 43 0.003 UniRef50_Q657G7 CRS2-associated factor 2, chloroplastic n=7 Tax=... 42 0.004 UniRef50_D2PDV9 Putative uncharacterized protein n=9 Tax=Sulfolo... 42 0.005 UniRef50_D1IJT2 Whole genome shotgun sequence of line PN40024, s... 42 0.006 UniRef50_Q5VMQ5 CRS2-associated factor 1, chloroplastic n=3 Tax=... 41 0.009 UniRef50_UPI00019841A3 PREDICTED: hypothetical protein n=1 Tax=V... 41 0.010 UniRef50_B5IFI5 CRS1 / YhbY domain superfamily n=2 Tax=Acidulipr... 41 0.012 UniRef50_A8IUV5 Predicted protein n=1 Tax=Chlamydomonas reinhard... 41 0.013 UniRef50_B5Y593 Predicted protein n=1 Tax=Phaeodactylum tricornu... 41 0.016 UniRef50_Q6YYA3 Chloroplastic group IIA intron splicing facilita... 40 0.022 UniRef50_Q6K4E4 Os09g0363100 protein n=2 Tax=Oryza sativa Japoni... 40 0.029 UniRef50_Q9SU76 Putative uncharacterized protein AT4g29750 n=1 T... 40 0.029 UniRef50_Q9SL79 CRS2-associated factor 1, chloroplastic n=1 Tax=... 40 0.030 UniRef50_B5Y4T8 Predicted protein n=1 Tax=Phaeodactylum tricornu... 40 0.030 UniRef50_A9S7Z4 Predicted protein n=1 Tax=Physcomitrella patens ... 40 0.030 UniRef50_A2XVM7 Putative uncharacterized protein n=1 Tax=Oryza s... 40 0.032 UniRef50_Q7XSB6 Os04g0492900 protein n=4 Tax=Oryza sativa RepID=... 40 0.033 UniRef50_B9RSN8 Putative uncharacterized protein n=1 Tax=Ricinus... 39 0.040 UniRef50_Q9FYT6 Chloroplastic group IIA intron splicing facilita... 39 0.041 UniRef50_Q9LDA9 CRS2-associated factor 2, chloroplastic n=6 Tax=... 39 0.051 UniRef50_UPI0001623CC4 predicted protein n=1 Tax=Physcomitrella ... 39 0.052 UniRef50_D1I399 Whole genome shotgun sequence of line PN40024, s... 38 0.072 UniRef50_B9H8U8 Predicted protein n=3 Tax=rosids RepID=B9H8U8_POPTR 38 0.098 >UniRef50_C1D4U0 CRS1_YhbY domain containing protein n=15 Tax=Proteobacteria RepID=C1D4U0_LARHH Length = 106 Score = 134 bits (339), Expect = 8e-31, Method: Composition-based stats. Identities = 46/96 (47%), Positives = 70/96 (72%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ +Q+Q+LKGLAH L PVV++G+NGL++ V+ EI L+ HELIKV++ +DRE + Sbjct: 3 IELTPEQRQYLKGLAHALNPVVMIGNNGLSDSVIREIAVNLDAHELIKVRVHGDDREVRA 62 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 + I + A VQ+IGK LV+YRP+ +++ISLP Sbjct: 63 ALYGQICDDLDAAPVQMIGKLLVIYRPSDKQRISLP 98 >UniRef50_D0KVG6 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVG6_HALNC Length = 106 Score = 132 bits (334), Expect = 2e-30, Method: Composition-based stats. Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 1/98 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQKQ L+ AH L PVVLLG +GLT+ V+AEIE AL HELIKV+I +DR+ K Sbjct: 1 MALTNKQKQFLRAQAHHLNPVVLLGQHGLTDAVMAEIELALSIHELIKVRIPGQDRDDKK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE-RKISLPR 97 +++ I TG+ VQ +G V YRP + +++LP+ Sbjct: 61 NMMQQIATTTGSELVQSVGHIAVFYRPDPDGTRLALPK 98 >UniRef50_P71376 RNA-binding protein HI1333 n=269 Tax=Proteobacteria RepID=Y1333_HAEIN Length = 99 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 72/96 (75%), Positives = 77/96 (80%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 LSTKQKQ LKGLAH L PVV+LG NGLTEGVLAEIE AL HHELIKVK+A DRETK L Sbjct: 3 TLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQL 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 I+ AIVRET A VQ IG LVLYRP++E KI LPR Sbjct: 63 IINAIVRETKAAQVQTIGHILVLYRPSEEAKIQLPR 98 >UniRef50_C7R8L3 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8L3_KANKD Length = 109 Score = 128 bits (323), Expect = 6e-29, Method: Composition-based stats. Identities = 46/96 (47%), Positives = 66/96 (68%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 LS Q + L+G AH LKP+V++G+NG+T+ VL EI AL HHELIK+K+ E+RE K Sbjct: 14 QLSNNQVKFLRGKAHSLKPIVMVGANGVTDNVLEEINIALNHHELIKIKVRAEEREDKQA 73 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 +++ I ++T A +QVIG L +YR + KI LP+ Sbjct: 74 MIDHICQQTKAAKIQVIGHNLSIYRKSANPKIILPK 109 >UniRef50_Q3SJR6 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q3SJR6_THIDA Length = 98 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 45/95 (47%), Positives = 64/95 (67%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ Q+Q+L+GLAH +PVV++ GLT VL EIE+AL HELIK+K A+++ E + Sbjct: 3 PLTPAQRQYLRGLAHNRQPVVMIRGQGLTPAVLKEIERALAAHELIKIKAASDESEVRRA 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 + I +GA VQ IGK LV+YRP + +I+LP Sbjct: 63 WLTEICAASGAEPVQQIGKVLVIYRPAAKPEITLP 97 >UniRef50_Q39US9 Putative uncharacterized protein n=5 Tax=Geobacter RepID=Q39US9_GEOMG Length = 139 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 59/95 (62%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+G+ H L PV+ +G ++ ++ E +ALEHHELIKVKI + + Sbjct: 43 LTGKQKRFLRGMGHSLNPVITVGKGEISTPLVRETSEALEHHELIKVKILESCIMDRHEV 102 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + + + GA QV+G+T +LYR +E K+ LP+ Sbjct: 103 ADELAKACGAEVAQVLGRTFLLYRKAEEPKLELPK 137 >UniRef50_P54454 Probable RNA-binding protein yqeI n=17 Tax=Firmicutes RepID=YQEI_BACSU Length = 96 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+ AH L P+ +G G+ + ++ +I +ALE ELIKV + E K + Sbjct: 2 LTGKQKRFLRSKAHHLTPIFQVGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKNDV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLP 96 EA+V+ + + VQ IG T+VLY+ +KE K I LP Sbjct: 62 AEALVKGSRSQLVQTIGNTIVLYKESKENKQIELP 96 >UniRef50_B7GKA7 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=211 Tax=Firmicutes RepID=B7GKA7_ANOFW Length = 97 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+ LAH L P+ +G G+ + ++ +I ALE ELIKV + E K ++ Sbjct: 2 LTGKQKRFLRSLAHHLTPIFQVGKGGVNDNMIKQIADALEARELIKVSVLKNCEEEKEVV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLPR 97 E + GA VQ+IG T+VLY+ ++E K I LP+ Sbjct: 62 AEQLAEGAGAEVVQLIGHTIVLYKESREHKQIVLPK 97 >UniRef50_Q1K0N8 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0N8_DESAC Length = 101 Score = 125 bits (316), Expect = 4e-28, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 64/97 (65%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + LS KQ + L+GL H L PVVL+G + +++GV+ +E+ L+ HELIKVK+ + Sbjct: 4 VTLSGKQNRFLRGLGHHLNPVVLIGKDAVSQGVIDSVEEVLDQHELIKVKLLEGCLVDRK 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + E + T + VQ++G+T++L+RPT E KI LP+ Sbjct: 64 NVAEQLSTTTDSSVVQILGRTILLFRPTPEGKIELPK 100 >UniRef50_B8CXY9 Putative uncharacterized protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXY9_HALOH Length = 96 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ+ +L+ A+ L PV+ +G +G+T +L +++ AL+ HELIK ++ Sbjct: 2 LTGKQRSYLRSEANNLNPVIHIGKDGITPSLLNQVDAALDDHELIKCRVLKNSLGEPRSF 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKI-SLP 96 + I + VQVIG VL+R +E I LP Sbjct: 62 ADEISSQLNCDVVQVIGNVFVLFRRNEEEPIYILP 96 >UniRef50_B8FUR8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B8FUR8_DESHD Length = 97 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK L+ L + + P++ +G G+TE V+A+ ++ LE ELIK ++ E Sbjct: 2 LTGKQKGFLRSLGNEMDPILQIGKGGVTEAVIAQTDETLEARELIKGRVLPNSMEDVQSA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLPR 97 + T A VQVIG+ +LYR +K++ I LPR Sbjct: 62 AAELAERTSAELVQVIGRNFLLYRESKKKPMIDLPR 97 >UniRef50_A8VU66 Cation antiporter n=4 Tax=Bacillales RepID=A8VU66_9BACI Length = 97 Score = 120 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS KQK++L+G AH LK + +G G+ ++ ++ +ALE ELIKV I E K + Sbjct: 2 LSGKQKRYLRGEAHSLKAIFQVGKAGVNANLIKQVGEALEARELIKVSILQNCSEDKHDV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLPR 97 + A VQ+IG T++LY+ ++E K I LPR Sbjct: 62 ARELSEGADAETVQIIGNTIILYKESEENKTIELPR 97 >UniRef50_B5JX32 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX32_9GAMM Length = 99 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 1/98 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LS KQ +HL+GLAH LKPVV++G NGL+E V+ EI AL HELIKVK++ + + Sbjct: 1 MQLSNKQIKHLRGLAHDLKPVVMVGQNGLSENVIEEIRGALTFHELIKVKVSGYEGSDRQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER-KISLPR 97 IVE I E A ++Q IGK +VL++ + KI +P+ Sbjct: 61 EIVEQICNEQKATHIQSIGKMVVLFKRNPNKIKIEIPK 98 >UniRef50_Q3BUR9 Putative uncharacterized protein n=20 Tax=Xanthomonadaceae RepID=Q3BUR9_XANC5 Length = 101 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 68/96 (70%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++ Q + L+G AH LK ++ G G+T LAE+E+ LE HEL+KVK+A+EDRET+ + Sbjct: 5 LTSAQNRFLRGQAHDLKALLQTGGKGVTPAFLAELEEVLERHELVKVKVASEDRETRDAL 64 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLPR 97 + ++ +TG+ VQ IG +LYRP+KE++ I LPR Sbjct: 65 IAELIEQTGSALVQRIGHVAILYRPSKEKRQIVLPR 100 >UniRef50_B6BX40 CRS1 / YhbY domain superfamily n=2 Tax=Nitrosococcus oceani RepID=B6BX40_9GAMM Length = 96 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 42/96 (43%), Positives = 69/96 (71%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ Q ++L+ LAH LKPVV++G +G+T+ VL EI +LEHHELIK+K+ +RE ++ Sbjct: 1 MPLTKNQTRYLRTLAHSLKPVVIVGQSGITKAVLDEIAGSLEHHELIKIKMHDAEREERS 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 +++ +++ T A VQVIG+ + YR ++ +I+LP Sbjct: 61 AMIKHVLQVTQAELVQVIGRIGIFYRRGEKARITLP 96 >UniRef50_C5SEC6 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SEC6_CHRVI Length = 100 Score = 119 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 2/99 (2%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M ++ KQK+ LK H LKPVVL+G G+TE VLAEIE AL+HHELIKV+I DR+ + Sbjct: 1 MPITEKQKRWLKPQVHHLKPVVLVGQYGITEPVLAEIEIALDHHELIKVRINAGDRDERD 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK--ISLPR 97 + I TGA + IG LYR +++ I LP+ Sbjct: 61 AAIGLICERTGADLINRIGNVAALYRHNPKKRDPIVLPK 99 >UniRef50_B9ZLQ7 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLQ7_9GAMM Length = 108 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 1/96 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 +NL+ Q++HL+ LAHP KP+V +G NGLT+ V+ E+EQAL HHEL+K+K+ DRE + Sbjct: 10 VNLTDAQRRHLRSLAHPRKPIVTIGRNGLTDAVVKELEQALAHHELVKIKVNIGDREARN 69 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK-ERKISL 95 VE + TG VQ IG L+R E K++L Sbjct: 70 GTVEDLCERTGGALVQRIGYVATLFRRNPDEPKVTL 105 >UniRef50_B1HUI3 UPF0044 protein n=9 Tax=Bacillales RepID=B1HUI3_LYSSC Length = 100 Score = 118 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+ AH L P+ +G G+ + + +I +ALE ELIKV+I E K + Sbjct: 2 LTGKQKRFLRAEAHHLSPIFQVGKGGVNDEMTKQIREALEVRELIKVRILDNCEEDKHEV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISLPR 97 EA+ + A VQ+IG T+VLY+ ++ +KI LP+ Sbjct: 62 AEALAKGAHAELVQLIGLTVVLYKESRNQKKIVLPK 97 >UniRef50_C3RQM1 Cation antiporter n=5 Tax=Bacteria RepID=C3RQM1_9MOLU Length = 95 Score = 118 bits (297), Expect = 6e-26, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 60/94 (63%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK++L+G+AH L + +G G+ + + I+ ALE HELIKVKI ++K I Sbjct: 2 LTGKQKRYLRGIAHNLNAIFQIGKEGVHQTQIEGIDDALEAHELIKVKILESCADSKNEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 + +T A VQ++G+T++LYRP+++ LP Sbjct: 62 ALELSMKTKADVVQILGRTIILYRPSEKEIYKLP 95 >UniRef50_B3E4L2 Putative uncharacterized protein n=6 Tax=Deltaproteobacteria RepID=B3E4L2_GEOLS Length = 109 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 44/94 (46%), Positives = 58/94 (61%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+HL+GL H LKPV+L+G L E ++AE E AL HELIKVK+ + Sbjct: 12 LTGKQKRHLRGLGHSLKPVILIGKKELDEALIAETEAALACHELIKVKVLENCMLDRHEA 71 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 EA+ TG+ QV+GKT +LYR + I LP Sbjct: 72 AEALSEATGSDVAQVLGKTFLLYRAAVKPVIVLP 105 >UniRef50_Q0A767 Putative uncharacterized protein n=2 Tax=Ectothiorhodospiraceae RepID=Q0A767_ALHEH Length = 100 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 49/92 (53%), Positives = 61/92 (66%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ Q++HL+ LAH LKPVV G+ GLTE V+AEIE ALE HELIKVK+ +R + Sbjct: 1 MRLNESQRRHLRRLAHDLKPVVRTGNAGLTEAVMAEIELALESHELIKVKLVGLERADRQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 +E I ETGA VQ +G+ VLYR RK Sbjct: 61 PTIEQICVETGAELVQKVGQVAVLYRANPRRK 92 >UniRef50_A1WXX4 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXX4_HALHL Length = 118 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 45/95 (47%), Positives = 61/95 (64%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L Q + L+ L H LKPVVL G+ GL+EGVL EIE+AL+ HELIKVK+A +E + Sbjct: 23 MQLDPDQLKQLRRLGHALKPVVLTGAAGLSEGVLEEIERALDDHELIKVKLAGASKEERQ 82 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 + I +TGA VQ IG+ ++LY+ E+ L Sbjct: 83 AMTTEIAEQTGAVVVQTIGRIVLLYQENPEKSQVL 117 >UniRef50_D0LJW9 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJW9_HALO1 Length = 101 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 5/101 (4%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATED----R 56 M L+ KQ++ L+ H L +V +G G++E + + AL+ HELIK+++ + Sbjct: 1 MPLTGKQRRFLRARGHGLSAIVQMGKEGMSEAFVHAVSSALDDHELIKIRLGQNSLHETK 60 Query: 57 ETKTLIVEAIVRETGACNVQVIGKTLVLYRPTK-ERKISLP 96 + E + R+T + QV+G TL+LYR E +I LP Sbjct: 61 SDRRSTAEELARQTESEVAQVLGNTLLLYRRHPEEPRIELP 101 >UniRef50_C4Z0A1 Putative RNA-binding protein containing KH domain n=20 Tax=Bacteria RepID=C4Z0A1_EUBE2 Length = 107 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 +++KQ+ +LKGLA + P+ G N LT A I +ALE ELIK+ + + I Sbjct: 13 MTSKQRAYLKGLAMTMDPIFQFGKNSLTPENTAAIAEALEARELIKISVLNNCADDPREI 72 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISLP 96 + + T + VQVIGK +VLY+ +K+ +KI LP Sbjct: 73 AQMVAERTRSQVVQVIGKKIVLYKESKDNKKIILP 107 >UniRef50_C6MBV6 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBV6_9PROT Length = 117 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 34/91 (37%), Positives = 55/91 (60%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ ++ LK AH L PVV++G +GL+ V+ E+++ L HELIK+++ +DR + Sbjct: 2 LTLTIAHRRALKAQAHALNPVVMIGKSGLSPSVIEELDRGLSSHELIKIRVLIDDRIVRN 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + E I + A VQ IGK ++YRP E Sbjct: 62 ELFEKICQLLNAAPVQHIGKVFIIYRPRPEE 92 >UniRef50_A6T082 Uncharacterized conserved protein n=4 Tax=Betaproteobacteria RepID=A6T082_JANMA Length = 156 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 40/90 (44%), Positives = 57/90 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ ++ L+ AH L PVV++G GLT GVL EI+ +L H LIKV++ +DRE + Sbjct: 2 LKLTPAERSSLRAEAHALSPVVIIGEAGLTPGVLKEIDGSLNSHGLIKVRVFGDDREARV 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 I + I + A +Q IGK LV+YRP KE Sbjct: 62 TIYDTICEKLDAAPIQHIGKLLVVYRPKKE 91 >UniRef50_Q82WX8 Uncharacterized protein family UPF0044 n=2 Tax=Nitrosomonas RepID=Q82WX8_NITEU Length = 126 Score = 115 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 36/94 (38%), Positives = 58/94 (61%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L Q++ L AH L P V +G +GLTE V+ E++++L HELIKVK+ DR+ + Sbjct: 2 LELDMAQRRQLAASAHHLNPTVTIGKDGLTENVIGELDRSLLKHELIKVKVLDGDRDQRA 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKIS 94 ++E I A V+ IG+ L++YR ++KI+ Sbjct: 62 SLLEQICLSLNAAPVEQIGRVLIIYRINPDKKIA 95 >UniRef50_UPI0000E87C63 hypothetical protein MB2181_02825 n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C63 Length = 96 Score = 115 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 39/95 (41%), Positives = 63/95 (66%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++KQ +LK L+HP+ PVV +G GLT+ V+ EI+ L HELIK+K+ ++ +E + + Sbjct: 2 LNSKQTAYLKALSHPINPVVQIGLKGLTDSVIKEIDVNLNAHELIKIKVQSDSKENREGL 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER-KISLP 96 +I + A + IGK LV++RP ++ KI+LP Sbjct: 62 WISICEKVRAEPINHIGKLLVIFRPNPKKTKITLP 96 >UniRef50_C9YA67 RNA-binding protein HI1333 n=10 Tax=Betaproteobacteria RepID=C9YA67_9BURK Length = 157 Score = 115 bits (289), Expect = 5e-25, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 56/92 (60%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ Q++ + AH L PVVL+G +GLT V EI+ AL H LIKV++ ++DR + Sbjct: 4 IQLTPAQRKEHRAEAHHLDPVVLVGGDGLTANVKKEIDAALNAHGLIKVRVFSDDRTARD 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 + + + E A +Q IGK LVL+RP ++ Sbjct: 64 EMFKTLAEELNAAPIQHIGKLLVLWRPKPAKE 95 >UniRef50_C2CFN8 RNA binding protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2CFN8_9FIRM Length = 94 Score = 115 bits (289), Expect = 5e-25, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 54/93 (58%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ+ LK AH KP++ +G +T+ ++ I++AL+ ELIK+KI + + + I Sbjct: 2 LTGKQRAFLKQEAHDFKPIINIGKFSVTDDLIKAIDEALQARELIKIKILNNNMDDQDEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 ++ I+ +T + + +G LYR ++ K L Sbjct: 62 IDTIIDKTSSEFISHLGSIFTLYRKNEDNKYGL 94 >UniRef50_D1YMG0 RNA-binding protein, YhbY family n=3 Tax=Veillonella RepID=D1YMG0_9FIRM Length = 94 Score = 115 bits (288), Expect = 7e-25, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ KQK++L+ LA + PVV +G NGL + V+ A+ ELIKVK+ E KT I Sbjct: 1 MTGKQKRYLRSLAATIPPVVQIGKNGLEDSVIDSARAAITARELIKVKLHNNSPEDKT-I 59 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + + GA VQVIG VLY+ KE KI LP+ Sbjct: 60 FQDLADMLGAELVQVIGFNGVLYKAKKEPKIILPK 94 >UniRef50_B1KZR2 CRS1/YhbY domain protein n=24 Tax=Bacteria RepID=B1KZR2_CLOBM Length = 97 Score = 114 bits (287), Expect = 8e-25, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++TKQ+ +L+ LA+ + + +G +GL + +L +I+ ALE ELIK+ + T Sbjct: 2 ITTKQRSYLRSLANKMDAIFQIGKDGLNDNLLKQIDDALEARELIKISVLKNSFYTAKEA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPT-KERKISLPR 97 I E +Q IG +VLYR + K+ KI LP+ Sbjct: 62 SSEICEELNCEGIQCIGSKVVLYRKSRKKPKIELPQ 97 >UniRef50_Q31HG7 Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HG7_THICR Length = 101 Score = 114 bits (287), Expect = 9e-25, Method: Composition-based stats. Identities = 43/96 (44%), Positives = 73/96 (76%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 LS Q + LKG+AH L P++++G+NG+TE ++ E+E+ LEHHEL+K+K+A+ +R + Sbjct: 6 KLSKNQIKFLKGIAHGLNPIIIIGANGVTESLMEELEKTLEHHELLKIKMASAERSDRKE 65 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 I++ I++ TGA VQ IGKT+V++R ++E ++ LP+ Sbjct: 66 IIDYILQNTGAQLVQSIGKTVVIFRQSEESELQLPK 101 >UniRef50_Q47HI3 Putative uncharacterized protein n=7 Tax=Betaproteobacteria RepID=Q47HI3_DECAR Length = 120 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 39/92 (42%), Positives = 54/92 (58%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + LS+ Q+ L+ AH L PVV + NGLTE VL EI+ L H+LIK+++ + RE + Sbjct: 2 LQLSSAQRSELRAQAHNLNPVVSIAENGLTEAVLKEIDLNLRAHQLIKIRVYGDSRENRI 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 E I + A VQ IGK LV++RP K Sbjct: 62 AFYEQICAQLDAAPVQHIGKLLVVFRPAPIEK 93 >UniRef50_P95453 Probable RNA-binding protein PA4753 n=18 Tax=Gammaproteobacteria RepID=Y4753_PSEAE Length = 104 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 39/91 (42%), Positives = 62/91 (68%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ +QK+ K + H LKPV+++ NGLTEGVLAE+E+AL HELIKVK+A +R+ + Sbjct: 1 MALTQEQKKQFKSIGHHLKPVLIVAENGLTEGVLAELERALNDHELIKVKLALAERDDRR 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 +++ + ++ + VQ IGK ++YR + Sbjct: 61 ALLDELCAQSRSDLVQSIGKMALVYRKNPKP 91 >UniRef50_A9HYV3 Putative uncharacterized protein n=5 Tax=Bordetella RepID=A9HYV3_BORPD Length = 203 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 36/87 (41%), Positives = 57/87 (65%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+++++ L+ AHPL+PVVL+G NGLT+ VL EI++AL H LIKV+ DR+ + Sbjct: 4 LELTSRERSDLRSAAHPLRPVVLIGDNGLTDAVLKEIDRALASHGLIKVRAGGSDRDERE 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 ++ +I V +GK L+L+RP Sbjct: 64 AMLASICDALSCAPVHHLGKMLILFRP 90 >UniRef50_Q607B1 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus RepID=Q607B1_METCA Length = 96 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 41/90 (45%), Positives = 59/90 (65%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 ++ + ++ L+ AH LKPVV+ G G+T GVL EI+ ALEHHELIKV++ DRET+ Sbjct: 3 RMTPELRRQLRAKAHKLKPVVITGQAGITPGVLGEIDMALEHHELIKVRVNAGDRETRAE 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + I E+GA VQ +G + L+R + ER Sbjct: 63 MTAQICGESGAELVQSLGHVITLFRKSPER 92 >UniRef50_B1XUM7 Putative uncharacterized protein n=2 Tax=Polynucleobacter necessarius RepID=B1XUM7_POLNS Length = 208 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 56/89 (62%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + ++ Q++ LK AH L PVV++G +GLT V+ E + A+ HH LIK+++ +DRE + Sbjct: 4 LTITPAQRKSLKADAHDLSPVVMVGGDGLTPAVIKEAKLAINHHGLIKIRVFGDDRELRI 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK 89 + E + + A VQ IGK LVL++P Sbjct: 64 AMYEELCDKLDAAPVQHIGKLLVLWKPKD 92 >UniRef50_D1D4Q5 RNA-binding protein n=21 Tax=Neisseria RepID=D1D4Q5_NEIGO Length = 94 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 38/89 (42%), Positives = 52/89 (58%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+TK+ LK AH L PVV++G GLT+ V+ E + AL HELIKV++ +DR + Sbjct: 5 KLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAALTAHELIKVRVFGDDRAERIE 64 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKE 90 I + A V+ IGK LVL+R E Sbjct: 65 ICNTLCEAVDAQPVRHIGKLLVLWRKNIE 93 >UniRef50_A6EYL2 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=11 Tax=Gammaproteobacteria RepID=A6EYL2_9ALTE Length = 103 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 44/91 (48%), Positives = 65/91 (71%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M+LS +Q++ +G+AH LKPV+++G GLTEG+ E+E+AL HELIK+K+A++DRET+ Sbjct: 1 MSLSPEQRREYRGIAHNLKPVIIVGDKGLTEGLQEELERALNDHELIKIKVASQDRETRQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 V A+ +GA VQ IGK V+ R K+ Sbjct: 61 EAVAALCEASGAELVQTIGKIAVILRRAKKP 91 >UniRef50_C8NFJ8 RNA-binding protein YhbY n=2 Tax=Granulicatella RepID=C8NFJ8_9LACT Length = 108 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 52/92 (56%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L K++Q K AH LKP+ +G GL+E ++ +I+ A+E ELIKV + E Sbjct: 1 MELKGKERQFFKKEAHSLKPIFQIGKGGLSEEMIHQIQNAVEKRELIKVTLLQNTLEEPQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 E I TG+ +QVIG T+VLY+ + K Sbjct: 61 EAAETIAEATGSTIIQVIGHTIVLYKEARNPK 92 >UniRef50_D1KBJ6 RNA-binding protein n=3 Tax=Gammaproteobacteria RepID=D1KBJ6_9GAMM Length = 100 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 42/98 (42%), Positives = 68/98 (69%), Gaps = 1/98 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ QK+ L+ H LKPVV++G +GL+E VLAE+E ++ HEL+K+KI TED++ K Sbjct: 2 IKLTNNQKKFLRSKGHALKPVVMVGQHGLSESVLAELESSMNKHELLKIKIRTEDKDEKQ 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP-TKERKISLPR 97 +++ I+ + + VQVIG +V+YR ++ +I LPR Sbjct: 62 KMIDKIIEFSQSHLVQVIGNVMVIYRAFDEDPQIILPR 99 >UniRef50_B1ZUH5 Putative uncharacterized protein n=2 Tax=Opitutaceae RepID=B1ZUH5_OPITP Length = 102 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 L+ Q+ L+GL L+P + +G GLT +E+++ L HEL+K++ +R+ + Sbjct: 4 FPLTGAQRTFLRGLGQRLEPALKVGKGGLTPAFYSELQKQLRAHELVKLRFLGVERDERA 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK---ERKISLP 96 + + I + V +G T + YR ER I+LP Sbjct: 64 SLCDEIADQGRCVCVGSVGHTALFYRQNPEPAERSIALP 102 >UniRef50_A5EXB7 YhbY family protein n=2 Tax=Cardiobacteriaceae RepID=A5EXB7_DICNV Length = 98 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ Q + LK AH L PV+L+G+ G T+ V EI AL+ HELIK+K+ + + Sbjct: 2 LNKTQIRFLKSTAHHLHPVILIGNQGTTQAVQREINTALDAHELIKIKLPPVTNNDQLTM 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTK-ERKISLPR 97 ++ I+ A VQ IG ++YR + KI+LPR Sbjct: 62 IDEIITAQHAEFVQKIGHIAIIYRHNPQQPKITLPR 97 >UniRef50_C4KVI2 CRS1 n=80 Tax=Betaproteobacteria RepID=C4KVI2_BURPS Length = 184 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 37/87 (42%), Positives = 58/87 (66%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 ++LS ++ L+ AH LKPVVL+G+ GLT+ VLAEIE L H+LIK+++ ++R+ + Sbjct: 4 LSLSPAERSALRSEAHALKPVVLIGAEGLTDAVLAEIEVHLAAHQLIKIRVFGDERDERV 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 I + I A +Q IGK LV+++P Sbjct: 64 AIYDEICDRLNAAPIQHIGKLLVIWKP 90 >UniRef50_B2V0A9 CRS1/YhbY domain protein n=22 Tax=Firmicutes RepID=B2V0A9_CLOBA Length = 98 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ+ +L+GL + P+ +G NG+ E L ++ QALE ELIK+K+ Sbjct: 2 LTGKQRAYLRGLGSNMAPIFQVGKNGIEENFLTQVAQALEKRELIKIKVLENSGLDTRET 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTK-ERKISLP 96 + I + VQ IG +VLY+ +K + KI +P Sbjct: 62 SDLICKSLKCEGVQAIGNKMVLYKKSKNKPKIEIP 96 >UniRef50_A0LDZ2 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=A0LDZ2_MAGSM Length = 106 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 4/100 (4%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M+L+ Q+ +LKGLAHPLKPVV +G G+ + VLA +E+AL HELIKV+ + +E + Sbjct: 1 MSLAGFQRTYLKGLAHPLKPVVFVGKEGVKDSVLAAVEEALLIHELIKVRFL-DFKEQRK 59 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE---RKISLPR 97 + +A+ ++ + V +IG +LYR E R+I LP+ Sbjct: 60 DLAKALATDSQSELVGMIGHLAILYRAHPEPEHRRIQLPK 99 >UniRef50_Q5P1G1 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=3 Tax=Rhodocyclaceae RepID=Q5P1G1_AZOSE Length = 156 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 56/90 (62%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ +++ L+ AH L PVV + NGLT VL EI+++L+ HELIK+K+ +R + Sbjct: 3 ELTPARRRELRAGAHHLNPVVSIAGNGLTPAVLGEIDRSLQAHELIKIKVHGAERAARDA 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKER 91 +++A+ GA +Q IG LV++R +E Sbjct: 63 LMKAVCDALGASPIQHIGTILVIWRERREE 92 >UniRef50_C3W9Y6 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3W9Y6_FUSMR Length = 101 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 56/94 (59%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L++K++ +L+ AH L +V +G G+T+ ++ I A+E ELIKVKI E K Sbjct: 1 MELTSKRRAYLRKKAHDLDALVRIGKEGVTDNLIQSILDAIESRELIKVKILQNCEEEKM 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKIS 94 I+E + + V +IG+T++L++ K++ + Sbjct: 61 EIMEQLSQCKEFEVVGIIGRTIILFKENKDKPVI 94 >UniRef50_D1VUN4 RNA-binding protein YhbY n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUN4_9FIRM Length = 97 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 56/90 (62%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L K + +LK LA+ L P+V +G GL+E + +++++LE HEL+K+K+ I Sbjct: 2 LRGKDRSYLKSLANNLDPLVQIGKFGLSESLFDQLDKSLEDHELVKIKVLKNSPVEAKEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK 92 V+ I+ +TGA VQ IG L +YR +KE K Sbjct: 62 VQEILEKTGAEFVQQIGSKLTIYRQSKENK 91 >UniRef50_C2HJU9 RNA binding protein n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJU9_PEPMA Length = 96 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 55/93 (59%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ KQ+ LK ++H KP+V +G G++E L +I+ L E++K+KI + + + ++ Sbjct: 2 ITPKQRAKLKKISHGYKPLVNIGKGGISENTLKQIDDTLNKREVMKIKILNNNLDDRDML 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 ++ I+ + V+ +G L +YR ++ + I L Sbjct: 62 IDEILTKLDCEFVRYMGNILTIYRESENKVIDL 94 >UniRef50_C8PXU7 23S rRNA methyltransferase J n=4 Tax=Moraxellaceae RepID=C8PXU7_9GAMM Length = 105 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 36/87 (41%), Positives = 50/87 (57%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +LS +HLKG+ H L PVV++G G+T V+ EI +AL HELIKVKI + + Sbjct: 5 SLSNADIKHLKGIGHQLNPVVMIGGQGVTPTVIEEIGRALTDHELIKVKIPAGSKADRDA 64 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPT 88 + AI T A V IG+ ++L R Sbjct: 65 VANAIAEATDATLVTSIGRMVLLLRRN 91 >UniRef50_Q03J88 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=75 Tax=Lactobacillales RepID=Q03J88_STRTD Length = 105 Score = 108 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 53/92 (57%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M+L++KQ+ LK AH LKP+V +G NGL + + + AL+ ELIKV + E Sbjct: 1 MSLTSKQRAFLKSEAHTLKPIVQIGKNGLNDHIKTSVRNALDARELIKVTLLQNTMEDIH 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 + E + E G V IG+ L+LY+ + +++ Sbjct: 61 EVAEILEEEIGCDTVLKIGRILILYKESAKKE 92 >UniRef50_B7C8W0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8W0_9FIRM Length = 96 Score = 108 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 50/95 (52%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+++ K++L+ L K + +G +GL++ ++ + +LE HEL+K + Sbjct: 2 LTSQNKKYLRKLGMDYKSLFQIGKDGLSDNLMDTLSDSLEAHELVKCNLLKTCPVDVREA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 TG+ V ++G T +LYR +KE K+ L + Sbjct: 62 AIECASATGSEVVHIVGHTFLLYRRSKENKLGLKK 96 >UniRef50_A0Z550 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=4 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z550_9GAMM Length = 111 Score = 108 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 3/99 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +LS + + +AH L PVV +G NGL+ VLAE+++AL HELIK+KIA DR+ + Sbjct: 11 SLSNTVLRQYRAIAHKLNPVVRVGGNGLSTNVLAEVDRALGDHELIKIKIAVGDRDLRDA 70 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKE---RKISLPR 97 ++E + + T A VQ IG T L R + RK +L R Sbjct: 71 LIEQLCQTTHAQLVQRIGNTATLLRRNPQADPRKSNLQR 109 >UniRef50_D2MM12 RNA-binding protein, YhbY family n=1 Tax=Bulleidia extructa W1219 RepID=D2MM12_9FIRM Length = 97 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 49/97 (50%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQK +L+ LA K G +GL++ + I+ A ELIK+ + Sbjct: 1 MILTPKQKAYLRSLAQTEKAKFQCGKDGLSDTFIELIQNAFHTRELIKIHVLKGLEVDVK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + I T + VQ+IG+ +VLY+ K +I LPR Sbjct: 61 ELALEIAHYTKSEVVQIIGRQVVLYKAMKTPRIVLPR 97 >UniRef50_B9MRC0 Putative uncharacterized protein n=2 Tax=Clostridia RepID=B9MRC0_ANATD Length = 95 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++KQ+ L+G+A+ + ++ +G G+TEGVL +I++AL ELIK+ + Sbjct: 2 LTSKQRAKLRGMANTMDAIIRIGKEGITEGVLKQIDEALTARELIKIALEKNCEIEPKEA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISL 95 + I + A VQVIG+ +V+YR ++E +I + Sbjct: 62 IAYICEKLNAEPVQVIGRKIVIYRMSEENPRIQI 95 >UniRef50_C7RKS5 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKS5_9PROT Length = 119 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 52/89 (58%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + LS+ +++ L+ AH L PVV + GL+E V+ EI +L HELIKV++ DR+ + Sbjct: 2 LTLSSTERRSLRARAHSLHPVVAISDKGLSESVVREINASLISHELIKVRVHNADRQVRE 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK 89 + + A VQ IGK LVL+RP Sbjct: 62 AFLNMLCERLQAAPVQHIGKLLVLWRPQP 90 >UniRef50_Q2S2W7 CRS1 / YhbY domain superfamily n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2W7_SALRD Length = 107 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+++Q+ HL+ AH P+V +G G+T+ V+ +E+A EL+ +++ Sbjct: 4 RLTSRQRAHLRSEAHGQDPLVHIGKEGVTDPVMQAVEEAFNTRELVTIRVLDNAPRPVRE 63 Query: 62 IVEAIVRET-GACNVQVIGKTLVLYRPTK-ERKISLP 96 + EA+ V+ IG T + YRP + +I LP Sbjct: 64 VAEAVADALEDVQVVRTIGGTALFYRPHPDDPEIDLP 100 >UniRef50_Q03GA6 RNA-binding protein, KH domain n=26 Tax=Lactobacillales RepID=Q03GA6_PEDPA Length = 103 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 51/90 (56%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L KQK++L+ AH +PV +G NGLTE L ++ AL++HEL+K+ I T Sbjct: 1 MELRGKQKRYLRARAHSYRPVFSVGKNGLTEAWLNQLAGALDNHELLKINIQQNSDATTA 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 E I T VQ IG+ LVL++ + E Sbjct: 61 EAKEFIESNTDIQVVQTIGRVLVLFKVSSE 90 >UniRef50_Q1DDA8 Putative uncharacterized protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DDA8_MYXXD Length = 96 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 1/90 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQ++HL+ L H L+PVV++G G+TEGV+A IEQAL+ HELIKVKI ET+ Sbjct: 1 MPLTGKQRRHLRALGHHLEPVVIVGQAGVTEGVIAAIEQALQDHELIKVKINEG-PETRQ 59 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 I A Q++G+T ++++ K+ Sbjct: 60 EAAARIAEGAQAELAQLLGRTALVFKKRKK 89 >UniRef50_B8DU23 Putative uncharacterized protein n=5 Tax=Actinobacteria (class) RepID=B8DU23_BIFA0 Length = 101 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 50/94 (53%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQ + L+ +A+ LKP+V +G L++ V+ + ++ +E ELIKV++ Sbjct: 1 MALTKKQVRQLRAMANQLKPLVQIGKGDLSDNVIKQADETIEKRELIKVQVLDGSGIDAK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKIS 94 + + GA VQVIG VLYR + I Sbjct: 61 EAAQGLADRMGAEVVQVIGNRAVLYRRSHRDDIE 94 >UniRef50_B2HXD4 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=20 Tax=Gammaproteobacteria RepID=B2HXD4_ACIBC Length = 107 Score = 106 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 42/90 (46%), Positives = 61/90 (67%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 LS +++ L+ + H L PVV++G GLT+ V+ E +AL HELIKVKIA EDRE + Sbjct: 3 ALSIHERKRLRQIGHVLNPVVMIGGQGLTDAVIEETLRALNDHELIKVKIAGEDREARAA 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKER 91 +++AIV TGA VQ IGK ++LY+ ++ Sbjct: 63 VIDAIVEATGAEAVQKIGKIVLLYKKAAKQ 92 >UniRef50_B5ENR6 Putative uncharacterized protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENR6_ACIF5 Length = 94 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 36/87 (41%), Positives = 58/87 (66%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L K +Q L+G AH LKPVV++G++G+T+GVLAE+E A+ HEL+KV++ + + + Sbjct: 2 LDAKHRQALRGQAHALKPVVIIGAHGITDGVLAELEVAIHAHELVKVRLPQVSHDERDAM 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTK 89 ++ + + A V IG+ L+LYRP Sbjct: 62 IKTLSTASHADVVGHIGRVLILYRPRP 88 >UniRef50_C0PR74 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=C0PR74_PICSI Length = 249 Score = 106 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 L+ K+K+ L AH L + +G +G+T V I ALE +ELIK+K+ + Sbjct: 128 ELTVKEKKELSAYAHSLGKKLKCHQVGKSGVTSSVEVSISDALEANELIKLKVHNTCPDE 187 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + + T + V IG+T +LYRP+ + Sbjct: 188 LDAVASRLQETTRSVVVGQIGRTFILYRPSPRK 220 >UniRef50_C9LL05 RNA-binding protein YhbY n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL05_9FIRM Length = 96 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQKQ+LK A VV +G G+T+ V+ + +AL ELIKVKI E Sbjct: 2 LTGKQKQYLKSTAVDFSAVVQIGKEGITDNVINSVTEALAARELIKVKINQNSAENIRKA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYR-PTKERKISLP 96 + + E+G VQ+IG+ +L++ K+ LP Sbjct: 62 AKLLSEESGCEIVQIIGRNCILFKQKDKKSHYDLP 96 >UniRef50_B4X4Q0 CRS1 / YhbY domain superfamily n=2 Tax=Alcanivorax RepID=B4X4Q0_9GAMM Length = 104 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 57/95 (60%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LST+ + L+ + H LKPV++ G GL++ + E+ LE HELIKVK+ E R+ + Sbjct: 1 MPLSTQDIKRLRRIGHHLKPVLIFGDKGLSDNFVEELNLRLEDHELIKVKVNAETRDDRA 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 IV+A+ + A +Q IG +LYRP ++ L Sbjct: 61 AIVQALTEKGSAELIQRIGNIALLYRPAQKPSAKL 95 >UniRef50_C5BQ04 RNA-binding protein, translation initiation factor n=3 Tax=Gammaproteobacteria RepID=C5BQ04_TERTT Length = 99 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 55/91 (60%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LS + + + L H L P+V + + G+T+ VLAEI +ALE HELIK+K+A DR+ + Sbjct: 1 MALSADKMKQYRTLGHSLNPIVTIAAKGVTDNVLAEINRALEDHELIKIKVAVVDRDARK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 ++ + + A VQ IGK +L+R + Sbjct: 61 AAIQEVCTSSNAQLVQEIGKVALLFREAAKP 91 >UniRef50_C9XNP1 Putative uncharacterized protein n=7 Tax=Clostridiaceae RepID=C9XNP1_CLODC Length = 122 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L KQ+ +L+ LA+ LKP +G G+TE L +++ L EL+KV I Sbjct: 2 LKGKQRAYLRSLANTLKPTTQIGKEGVTESFLEQLDGMLRTRELVKVTILENAGLDTKET 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPT-KERKISLP 96 A+ A VQ IG +Y+ +E KI P Sbjct: 62 ANAVCEALRAEFVQAIGFKFTIYKRNIEEPKILFP 96 >UniRef50_Q1MZR4 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=Q1MZR4_9GAMM Length = 101 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 41/93 (44%), Positives = 59/93 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ ++K+ LK + H L PVV + NGL+E V+ EI++ALE HELIKVK A DR+ K Sbjct: 1 MQLTQERKKALKAIGHKLNPVVTVAGNGLSESVILEIDRALEDHELIKVKFAVGDRDLKK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKI 93 ++ + T + VQ IG + YRP KE ++ Sbjct: 61 DLLVETEKVTRSTLVQSIGNIGLFYRPAKEPQL 93 >UniRef50_A8ZX30 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8ZX30_DESOH Length = 101 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 4/99 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT-EDRETKT 60 L Q+++L+ LAH LKPVV +G G+T+ V+ I++AL+ HELIK+K+ ++++ K Sbjct: 3 QLKGFQRKYLRELAHSLKPVVSIGQKGITDAVIRTIDEALDTHELIKLKLLAFKEKDQKK 62 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPT---KERKISLP 96 I+E I E IG T +L+R ++RKI+LP Sbjct: 63 EIIERIEVENKCEVAGTIGHTAILFRQHQDPEKRKITLP 101 >UniRef50_A9B571 Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B571_HERA2 Length = 100 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 4/100 (4%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L++ Q+Q+L+ LAH LKPVV +G GL+ V+A + AL+ HELIKVK E +E + Sbjct: 2 LTLNSNQRQYLRRLAHDLKPVVQIGKQGLSSTVVAAVAAALDAHELIKVKF-GEFKEERR 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK---ERKISLPR 97 + + +V +T A V ++G +LYRP++ ++ I LPR Sbjct: 61 ELTDQLVADTEATLVALVGNVAILYRPSRLDDKQVIVLPR 100 >UniRef50_C4FU95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU95_9FIRM Length = 117 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 36/87 (41%), Positives = 48/87 (55%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +L+ KQ HLK +AH KP+ +G GL + L +++QAL ELIK K+ E Sbjct: 15 SLNKKQVNHLKKIAHHEKPIFQMGKEGLGQSFLDQVDQALTKRELIKFKVLQNSEEEIRE 74 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPT 88 + I A VQVIG T VLYRP+ Sbjct: 75 VTAEIAYALDAHVVQVIGHTGVLYRPS 101 >UniRef50_A6GAH3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAH3_9DELT Length = 104 Score = 104 bits (261), Expect = 8e-22, Method: Composition-based stats. Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 6/101 (5%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT-EDRETKT 60 LS KQ++ L G+AH L PVV +G+ GLTE V A + +AL HELIKVK+ + + Sbjct: 4 ELSPKQRKFLSGMAHSLSPVVQVGAAGLTESVFAAVSEALRRHELIKVKLPKVDSAAERH 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP-----TKERKISLP 96 + + ++ + A V ++G+ V+Y+P + +I LP Sbjct: 64 ALYDTLIEGSEALRVALLGRVAVIYKPRGKDLPDKPRIQLP 104 >UniRef50_A9S9R6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S9R6_PHYPA Length = 274 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 L K+K+ L+ AH L + +G GLT + I ALE +ELIK+++ E Sbjct: 143 QLGNKEKKELRAYAHQLGNDICIHQVGKWGLTANCITAISDALEANELIKIRVLDNLDEE 202 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 + +TGA V +G+TL+LYRP+ Sbjct: 203 LADTASKLESKTGAQIVGKMGRTLLLYRPS 232 >UniRef50_A0Q5D2 RNA-binding protein n=21 Tax=Gammaproteobacteria RepID=A0Q5D2_FRATN Length = 92 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 43/90 (47%), Positives = 56/90 (62%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 + KQ+Q LK AH LKPVVL+G GLTE V+ EI+ AL H+LIKVK+ +E K I Sbjct: 1 MDVKQQQKLKAQAHSLKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQI 60 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK 92 I + T + VQ+IG LVLYR ++ Sbjct: 61 ASEITQATSSELVQIIGNILVLYRRNPNKE 90 >UniRef50_D2RB57 RNA-binding protein, YhbY family n=17 Tax=Actinobacteria (class) RepID=D2RB57_GARVA Length = 101 Score = 103 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 52/89 (58%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQ + L+ LA+ L P++ +G N +T+ + + ++ +++HEL+K + + Sbjct: 1 MALTKKQIKQLRALANTLSPLLYVGKNDITDAAVKQADETMQYHELMKCSVQDGSGLSAK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK 89 +A+ ++ GA VQVIG VL+R + Sbjct: 61 EAADALAQKLGAEVVQVIGNRFVLFRVSP 89 >UniRef50_Q0EZJ5 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZJ5_9PROT Length = 92 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 40/87 (45%), Positives = 55/87 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LS+K+++ LK AH LKPV+ +G G+TE ++ E EQAL+ HELIKV IA E+ Sbjct: 1 MALSSKERKELKARAHHLKPVIRIGQKGITENLVLETEQALDTHELIKVHIAGENGSECK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 + R++ A V IGKT +LYR Sbjct: 61 ASGLELARQSHAEVVDHIGKTTILYRK 87 >UniRef50_Q2IMK4 Putative uncharacterized protein n=5 Tax=Myxococcales RepID=Q2IMK4_ANADE Length = 187 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 1/89 (1%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 S+ ++ L+ H L PVV +G +GLTE VL ++++AL HEL+K+K+ TE E + I Sbjct: 15 SSPLRRALRAAGHHLSPVVQVGKDGLTEAVLRQLDEALLAHELVKMKVGTESPEDRLEIA 74 Query: 64 EAIVRETGACNVQVIGKTLVLYRPTKERK 92 + ++ E QV+G+T++ YR ER Sbjct: 75 DRLLAE-DVQVAQVLGRTVLAYRRHPERP 102 >UniRef50_D1PPV8 Transcription-repair coupling factor n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPV8_9FIRM Length = 99 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 43/89 (48%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++KQ+ L+G A+ L PV +G + E ++ + L ELIKVK+ + Sbjct: 2 LNSKQRAALRGAANTLDPVFQIGKGEIDETLIQGVGDCLAARELIKVKVLENSEYSAREA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER 91 + A VQVIG+ VL++ + Sbjct: 62 ANILAEALSADCVQVIGRKFVLFKQKPKE 90 >UniRef50_C6JNB7 Putative uncharacterized protein n=5 Tax=Fusobacterium RepID=C6JNB7_FUSVA Length = 102 Score = 101 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 58/92 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L++KQ+ LK AH L P+V +G +G+TE ++ I +A++ EL+KVKI + K Sbjct: 1 MALTSKQRAFLKKKAHELNPLVRIGKDGVTESLIQSILEAIDSRELLKVKILQNCEKEKE 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 ++E + + + V +IG+T++L+R +++ Sbjct: 61 EVLEELSKCSEFEIVGIIGRTIILFRENRDKP 92 >UniRef50_Q4JMW4 Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC13K9BAC RepID=Q4JMW4_9BACT Length = 97 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 55/89 (61%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +S+ +++ LK A+ +KP+V++G NGLT+ V+ EI+ AL+ HELIKV+ D++ +T Sbjct: 4 RISSNKRKELKKKAYTMKPIVMIGQNGLTDAVINEIDVALKTHELIKVRAKGSDKDERTK 63 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKE 90 I + A + IG VLYRP + Sbjct: 64 QCMKIKEKLNADIIHRIGFITVLYRPAPD 92 >UniRef50_C6NUK8 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUK8_9GAMM Length = 113 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 39/87 (44%), Positives = 60/87 (68%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS+K++Q LK AHPL+PV+L+GS GL ++ E+++ L HHELIKV++ +RE + + Sbjct: 2 LSSKERQALKARAHPLQPVLLVGSAGLGPALMEELDRVLLHHELIKVRLPAVERELRDAM 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTK 89 V I+ +GA + IG+ L+LYRP Sbjct: 62 VAEILATSGAEAIARIGRILILYRPRP 88 >UniRef50_B6BWT9 CRS1 / YhbY domain superfamily n=1 Tax=beta proteobacterium KB13 RepID=B6BWT9_9PROT Length = 95 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ + LK AH LK V +GS G+T V++EI + HELIK++I ++ ++ + I Sbjct: 2 LNNKQIKALKAEAHHLKTTVSVGSKGITNQVISEIANTINFHELIKIQIQSDTKQDRLEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYR-PTKERKISL 95 + I + T + VQ+IGK V+++ +E K S+ Sbjct: 62 AKQICQATESEFVQLIGKQAVIFKQKNEESKFSI 95 >UniRef50_A9WDQ0 Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WDQ0_CHLAA Length = 95 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 + Q+ +L+ LAHPL V++G NGLTEG+LA+IEQ L HELIKV+ + ++ K + Sbjct: 1 MKPAQRAYLRRLAHPLPVTVMIGKNGLTEGILAKIEQELNAHELIKVRFL-DHKDMKQSL 59 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER 91 E IV ETGA V +IG T +L+R + Sbjct: 60 TETIVSETGADLVAIIGHTAILFRQHADP 88 >UniRef50_C5V7C4 Putative uncharacterized protein n=2 Tax=Gallionellaceae RepID=C5V7C4_9PROT Length = 116 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 2/96 (2%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ ++ LKG AH LKP V++G+ GLTE VL EI +L+ HELIK+++ +R + Sbjct: 2 LELTVTERLTLKGRAHQLKPTVMIGNAGLTESVLKEISVSLKQHELIKIRVMA-ERADRE 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE-RKISL 95 ++ I + A VQ IGK LV+Y P + KI + Sbjct: 61 TMLTEICTQLNAAPVQHIGKILVIYLPKPDAEKIEI 96 >UniRef50_C9N0K7 RNA-binding protein YhbY n=4 Tax=Bacteria RepID=C9N0K7_9FUSO Length = 115 Score = 99.6 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET-K 59 + LS+K++ LK LAH L P+V +G +G+ E VL I + ++ ELIKVKI Sbjct: 2 IQLSSKERAFLKKLAHNLDPIVRIGKDGIDENVLKSISEVVKKRELIKVKILQNSSVEFD 61 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPT--KERKIS 94 + I ++T + V IG L+ ++P K+ KI+ Sbjct: 62 REMATEIAQKTKSVFVDKIGSVLIFFKPKTTKDAKIT 98 >UniRef50_C0QM00 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM00_DESAH Length = 102 Score = 99.6 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT-EDRETKT 60 L Q+++L+GLAH +KP +G GLT+ ++ EI +AL+ ELIKVK +++ KT Sbjct: 3 ELKGSQRKYLRGLAHDIKPSAFVGQKGLTDALVNEINEALDASELIKVKFVDYKEKTVKT 62 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK---ISLP 96 + + I T + +IG + YR K + I +P Sbjct: 63 SLAQEIETSTASHLAGLIGHVAIYYREHKNPEKRVIRIP 101 >UniRef50_A5TU14 Possible RNA binding protein n=8 Tax=Fusobacterium RepID=A5TU14_FUSNP Length = 99 Score = 99.6 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 1/94 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 +++K++ LK AH L+P+V +G +GL + ++ I A+ ELIKVKI E KT+I Sbjct: 1 MNSKKRAFLKKKAHNLEPIVRIGKDGLNQNIVQSILDAIASRELIKVKILQNCEEEKTII 60 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISL 95 ++ V ++G+T+++++ KE ISL Sbjct: 61 YSKLMDIKDFEVVGMVGRTIIIFKENKENPSISL 94 >UniRef50_UPI0001A7B00B RNA binding n=1 Tax=Arabidopsis thaliana RepID=UPI0001A7B00B Length = 222 Score = 99.3 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE 57 + LS K+K+ L AH L + L+G +G+T+ V+ + LE +EL+KVKI Sbjct: 117 LELSAKEKRKLASYAHHLGDKLKSQLVGKSGVTDSVVLSFVETLEKNELLKVKIHRTCPG 176 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 ++ + TG+ +V I +T++LYRP+ + Sbjct: 177 ELEDMILRLEEATGSVSVGQIARTVILYRPSPTK 210 >UniRef50_B4D0Q3 Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Q3_9BACT Length = 92 Score = 98.9 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ +K+ LK A L+PVV LG G+++ + +++AL H L+K+K A + +E K Sbjct: 4 TLTNAEKRDLKAQAQRLEPVVKLGHGGMSDAFIHSLDEALNQHGLVKMKFA-DFKEEKKT 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + I TG+ V +G V YRP E Sbjct: 63 LAPQIAERTGSAIVMQVGNVAVFYRPKPEE 92 >UniRef50_C6TB79 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TB79_SOYBN Length = 260 Score = 97.7 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 +LS K+++ L AH L + L+G +G+T + + LE +EL+K+KI Sbjct: 120 SLSVKERKELASYAHSLGDKLKTQLVGKSGVTPNLATSFIETLEANELLKIKIHRTCPGE 179 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 +V+ + TG+ V IG+T ++YRP+ Sbjct: 180 LDDVVKQLEEATGSVAVGQIGRTFIIYRPS 209 >UniRef50_C7TK22 RNA-binding protein n=8 Tax=Lactobacillus RepID=C7TK22_LACRL Length = 103 Score = 97.7 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 4/97 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK++L+ LA KP++ +G NGL + +A ++ A+E EL+K+ + +T + Sbjct: 2 LTGKQKRYLRSLAMTTKPLIQVGKNGLGDAFVAGVKDAIETRELVKISLLPTADDTPQEV 61 Query: 63 VEAIVRE-TGACNVQVIGKTLVLYR---PTKERKISL 95 + + G Q+IG+T+++Y+ ++ R+ISL Sbjct: 62 ADTLQAAIAGLEVAQIIGRTVIVYKQAEKSEHRRISL 98 >UniRef50_C2KVY9 RNA binding protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KVY9_9FIRM Length = 101 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 +K + LKG A ++P + LG N +T + + + +E HEL+K+ + + + Sbjct: 7 DSKMRSALKGAAQKIEPTLSLGKNSITPEFIEAVREYMEKHELMKIHVLKNCIDDLRELG 66 Query: 64 EAIVRETGACNVQVIGKTLVLYRPTKERK 92 I +G VQ+IG+ +VLY+P KE K Sbjct: 67 NTIAERSGTELVQIIGRMIVLYKPAKEEK 95 >UniRef50_Q6AML8 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AML8_DESPS Length = 115 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 4/99 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++++K+ LKGLAH L V +G LT ++ + L+ HEL+KVKI K Sbjct: 17 LNSREKKFLKGLAHSLAVGVQIGKEDLTPSLIDATKLELDRHELVKVKIGKSSGLDKKEA 76 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE----RKISLPR 97 E + T + VQ+IGKT+VLY+ KE ++I LPR Sbjct: 77 SEKLPLLTESSFVQLIGKTIVLYKENKEIVKDKRIRLPR 115 >UniRef50_Q38VT8 Putative uncharacterized protein n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38VT8_LACSS Length = 105 Score = 95.4 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK +L+GLA KP+ LG NGL+E +IE+A+E ELIK+ + T + Sbjct: 2 LTGKQKHYLRGLAQTTKPLFQLGKNGLSEAYFEQIEEAIEKRELIKINLLQTTEVTVDEL 61 Query: 63 VEAIVRETGA-CNVQVIGKTLVLYRPTKERKIS 94 + + Q IG+TLV+Y+ +++ K Sbjct: 62 ANFLKQHDNRIEIAQKIGRTLVIYKASRKEKYQ 94 >UniRef50_Q8TUY0 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=1 Tax=Methanopyrus kandleri RepID=Q8TUY0_METKA Length = 105 Score = 95.0 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 2/90 (2%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE--DRETK 59 LS K+++ L+ A L PVV +G GLT GV+ E+++ LE LIKV+ R + Sbjct: 6 RLSGKERRALRARAVLLDPVVRIGKKGLTSGVIQEVDRQLEERGLIKVRFERNILRRYDR 65 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPTK 89 + E + R+ A + V G+T VL+RP + Sbjct: 66 KELAEELARKVNAELIDVRGRTAVLFRPRE 95 >UniRef50_D1IXC2 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1IXC2_VITVI Length = 287 Score = 95.0 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 3/91 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE 57 +NL+ K+K+ L AH L + L+G G+T V + + LE +EL+K+KI Sbjct: 143 VNLTIKEKKELASYAHSLGKKLKCQLVGKQGVTASVASAFIENLESNELLKIKIHGTCPG 202 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 +V+ + TG+ V IG++++LYRP+ Sbjct: 203 ELPDVVKQLEESTGSVVVGQIGRSVILYRPS 233 >UniRef50_D1AXZ7 Putative uncharacterized protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AXZ7_STRM9 Length = 112 Score = 94.6 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 1/90 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT-L 61 +++K++ L+ AH L+PVV +G GLT+ V+ I+ +E +EL+KVK+ E Sbjct: 1 MNSKERNFLRKRAHGLEPVVRVGKEGLTDMVIESIKSYIEKNELMKVKLLQNSLEDVNIE 60 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKER 91 ++ I + V +GK ++ ++ +++ Sbjct: 61 LINEIETKAKCFFVGSVGKVMIFFKEKRDK 90 >UniRef50_B6T8H1 CRS1 / YhbY domain containing protein n=5 Tax=Poaceae RepID=B6T8H1_MAIZE Length = 259 Score = 93.5 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 LS K+++ L AH L + +G +G+T +++ LE +EL+K+KI Sbjct: 95 KLSVKERKELASYAHGLGKKLKSQQVGKSGVTPNLVSAFSDNLESNELLKLKIHGNCPGE 154 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 ++ + TG+ V IG++++LYRP+ Sbjct: 155 LPDVILQLEESTGSIAVDQIGRSVILYRPS 184 >UniRef50_C8NZI1 RNA-binding protein YhbY n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZI1_ERYRH Length = 94 Score = 93.1 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 45/93 (48%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS QK+ LK ++H K V +G NGLTE V E ++ H L+KV I T Sbjct: 2 LSKDQKKELKRISHEEKTTVFIGKNGLTETVYETFETSMLAHNLVKVSIQKNSDVTILEA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 VEA V IG+ V YR +K +I + Sbjct: 62 VEAFEDRFSCDLVSKIGRVAVFYRFSKNGRIKV 94 >UniRef50_D1AKP9 Putative uncharacterized protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AKP9_SEBTE Length = 106 Score = 92.3 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR-ETK 59 M LS+KQ+ LK +AH L+PVV +G + +L I + ELIKVK+ + Sbjct: 1 MKLSSKQRALLKKMAHDLEPVVRIGKGEVDGDLLESISNVINKRELIKVKVLQNSELDNM 60 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + + +T + V IGK ++L++P KE Sbjct: 61 KDLGFELAEKTSSVFVDKIGKVIILFKPKKEN 92 >UniRef50_C1AC38 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC38_GEMAT Length = 99 Score = 91.9 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 40/88 (45%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ K + L+ AH L V +G GLT ++ + L H L+KV++A + Sbjct: 1 MTGKTRAALRAEAHHLDVHVHIGHAGLTPSLMQSFDDVLRTHMLVKVQVAKGGELSAKDA 60 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE 90 A +QVIG+T +YR E Sbjct: 61 ANQSAEALKAEVIQVIGRTFAVYRENPE 88 >UniRef50_B9HRH4 Predicted protein (Fragment) n=4 Tax=rosids RepID=B9HRH4_POPTR Length = 99 Score = 91.6 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 3/89 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L+ K+K+ L AH L + L+G +G T+ V + LE +EL+K+KI Sbjct: 1 LTVKEKKELASYAHGLGKKLKSQLIGKSGFTDNVATSFIETLEANELLKIKIHRTCPGEL 60 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPT 88 +V + TG+ V IG+T+++YRP+ Sbjct: 61 EDVVRRLEEATGSVVVGQIGRTVIIYRPS 89 >UniRef50_Q9FW07 Os10g0512500 protein n=2 Tax=Oryza sativa RepID=Q9FW07_ORYSJ Length = 252 Score = 91.2 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 LS K+++ L AH L + +G G+T V+A LE +EL+K+KI Sbjct: 101 KLSVKERKELASYAHGLGKRLKSQQVGKGGVTPSVVAAFNDNLESNELLKLKIHLNCPGE 160 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 ++ + TG+ V IG++++LYRP+ Sbjct: 161 LPDVILQLEESTGSIAVDQIGRSVILYRPS 190 >UniRef50_C9KQ51 CRS1 / YhbY domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ51_9FIRM Length = 84 Score = 90.8 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Query: 14 LAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGAC 73 + L+PVV +G G+T V+ +A++ ELIKV++ E + + A Sbjct: 1 MGMKLEPVVQIGKEGVTPSVVQAAREAIKKRELIKVRVLQNCMELPADAIAMVAERADAN 60 Query: 74 NVQVIGKTLVLYRPT-KERKISLP 96 VQVIG+ +L++ ++ KI LP Sbjct: 61 LVQVIGRNGLLFKRNFEKPKIELP 84 >UniRef50_Q58068 Probable RNA-binding protein MJ0652 n=11 Tax=Methanococcales RepID=Y652_METJA Length = 134 Score = 89.6 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR--ETK 59 L+ K K+ L+ AH L+PVV +G G +E V+ E+++ L+ LIKVK+ E K Sbjct: 12 KLTGKMKRMLRAKAHHLEPVVWVGKEG-SEKVIKEVDRQLKERGLIKVKVRKAALLYEDK 70 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPTK 89 I E + + A V V+G + L+RP + Sbjct: 71 YEIAEKLAKACDAEVVSVVGHVITLFRPRE 100 >UniRef50_C8QYL8 Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYL8_9DELT Length = 157 Score = 88.1 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Query: 9 QHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVR 68 + L+ H L P V++G GLT VLA +E L HEL+K+KI E KT + + + Sbjct: 15 RELRAQGHHLNPTVMVGREGLTAAVLAALEAVLTAHELVKIKIQEGCPEDKTTVAQQLAA 74 Query: 69 ETGACNVQVIGKTLVLYR--PTKERKISLPR 97 ++ + VQ+IG T++LYR P +R PR Sbjct: 75 DSNSRIVQIIGGTILLYRRLPPAKRHSDGPR 105 >UniRef50_B5JKD4 CRS1 / YhbY domain superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKD4_9BACT Length = 95 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS+K+K L+G A LKP + +G NGL E V+ EI +A E ELIK+ E E +++ Sbjct: 4 LSSKEKAELRGAAQRLKPAIHIGKNGLGEPVVLEIRKAFERDELIKIDFKAERPEIESMS 63 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER 91 +E I R+T + V +GK +R E Sbjct: 64 LE-IERKTQSQCVGGVGKKRSFHRKMPEP 91 >UniRef50_B9XGY3 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XGY3_9BACT Length = 85 Score = 79.2 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 18 LKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQV 77 ++P++ +G GL+E L +++AL HHEL+K+K A + +E K + + +T + V Sbjct: 1 MEPILKVGKAGLSEAFLKSVDEALAHHELVKIKFA-DFKEEKKTLSPQLAEKTSSHLVMR 59 Query: 78 IGKTLVLYRPTKE 90 +G +VLYR E Sbjct: 60 VGNVVVLYRKKAE 72 >UniRef50_C4V0X4 RNA binding protein n=2 Tax=Selenomonas RepID=C4V0X4_9FIRM Length = 81 Score = 78.8 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Query: 16 HPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNV 75 + VV++G G++ V+A + ++ ELIKV++ E + + A V Sbjct: 1 MTEEAVVMIGKEGVSPAVVASAREVIKKRELIKVRVLQNAPEEPADAITMLAERADANLV 60 Query: 76 QVIGKTLVLYRPT-KERKISL 95 QVIG+ +L++ + +I L Sbjct: 61 QVIGRNGLLFKRNFDKPRIEL 81 >UniRef50_A8TFT3 Putative uncharacterized protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFT3_METVO Length = 132 Score = 74.2 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 3/89 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE--TKT 60 +++K K+ L+ + ++PVV +G G+ E V+ E+ + L+ LIK+KI E K Sbjct: 10 ITSKAKKILRSQSQSIEPVVWVGKEGV-EKVIEEVRRQLKDKSLIKIKIRRSAIEGMEKD 68 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK 89 I + I T + V ++G + L++P + Sbjct: 69 EIAKIITDSTDSEVVSIVGNVITLFKPKE 97 >UniRef50_B9RHB6 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9RHB6_RICCO Length = 311 Score = 73.1 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 20/105 (19%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQAL---------------EH 43 NL+ K+K+ L A+ L + L+G +G+T+ V + L E Sbjct: 162 NLTVKEKKELASYANSLGKKLKSQLVGKSGVTDNVATSFIETLKQMSXRIVWCAKPVLEC 221 Query: 44 HELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 E IK+ +V+ + TG+ V IG+T+++YRP+ Sbjct: 222 SEQIKI--HRTCPGELEDVVQRLQEATGSVVVGQIGRTVIIYRPS 264 >UniRef50_Q0W1M5 Putative uncharacterized protein n=2 Tax=Euryarchaeota RepID=Q0W1M5_UNCMA Length = 87 Score = 70.0 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET--KT 60 + TK+ L+G+A ++ +G NG+T ++ E+ + L+ ++L+KVK+ E K Sbjct: 1 MDTKKILELRGMAARMEASTHIGKNGVTPSLIEEVSRQLKDNKLVKVKVLKSAFEEMPKE 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 I + + +TG+ ++V G T+VL++ Sbjct: 61 EIAKLLAEKTGSELIEVKGNTIVLFKR 87 >UniRef50_A8ICQ7 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8ICQ7_CHLRE Length = 267 Score = 67.3 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 10/101 (9%) Query: 2 NLSTKQKQHLKGLAHPLKP-----VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR 56 + K ++ + A L V +G G+T L L+ H L++VK+ Sbjct: 114 PMHIKDRKLWRARAEALAKEKKLIRVQVGQLGITPAFLRATSDVLQKHGLVRVKLGEGSG 173 Query: 57 ETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + + + R A V IG T+ LYR LPR Sbjct: 174 VERANAADVLERYLDAVCVHQIGFTITLYRRQ-----GLPR 209 >UniRef50_Q12W46 RNA-binding protein n=4 Tax=Methanosarcinaceae RepID=Q12W46_METBU Length = 86 Score = 63.4 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Query: 6 KQKQH-LKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATED--RETKTLI 62 K++ + L+ A +KP++ +G G+T+ ++ E+++ ++ L+KVK+ + I Sbjct: 3 KERLYKLRSEATNIKPIINVGKGGITDQLIMELKKHIKERHLVKVKVLKSASYEDGIDAI 62 Query: 63 VEAIVRETGACNVQVIGKTLVLYR 86 E + T + V G ++VLYR Sbjct: 63 AENLAEATRTTVIDVRGSSVVLYR 86 >UniRef50_C1VAK9 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=10 Tax=Halobacteriaceae RepID=C1VAK9_9EURY Length = 82 Score = 63.4 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Query: 8 KQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR--ETKTLIVEA 65 KQ L+ AH + V +G +G++ V E+ L +L+K+K R T + E Sbjct: 3 KQDLRKEAHDIDVTVWVGKSGIS-AVEEELSDQLADRDLVKIKFLRSARAGTTVEELTEE 61 Query: 66 IVRETGACNVQVIGKTLVLYR 86 + A ++ G T V++R Sbjct: 62 LADRVNAEVIETRGNTGVVHR 82 >UniRef50_A6DTJ2 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTJ2_9BACT Length = 91 Score = 63.1 bits (153), Expect = 3e-09, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 44/89 (49%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +S + + L+ L+ ++G GLT+ + I +A +LIKV + + E Sbjct: 3 KISGSEARALRAKGAQLEASAVIGKRGLTDENIKIINEAFLKQDLIKVTVRKKAFENPKD 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKE 90 V+ I + A VQ +G L+LY+ +++ Sbjct: 63 EVQNIATQFEATIVQHLGSALLLYKSSED 91 >UniRef50_A2BN52 Conserved archaeal protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BN52_HYPBU Length = 120 Score = 61.5 bits (149), Expect = 8e-09, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 9 QHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE----DRETKTLIVE 64 LK + V++G GLTE VL EI++ L+ ++KVK + + + Sbjct: 6 ARLKEIVQQGPADVIIGKKGLTEAVLKEIDRRLKEKGIVKVKALKSAIKVTGLDRRELAK 65 Query: 65 AIVRETGACNVQVIGKTLVLYRPTKERK 92 + A + V G+T VLYRP + + Sbjct: 66 TVAERLNARLLDVRGRTFVLYRPEPQTR 93 >UniRef50_Q9P9D4 RNA-binding protein n=1 Tax=uncultured marine group II euryarchaeote 37F11 RepID=Q9P9D4_9EURY Length = 87 Score = 60.4 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Query: 23 LLGSNGLTEGVLAEIEQALEHHELIKVKIATE--DRETKTLIVEAIVRETGACNVQVIGK 80 +G +GLT+ V+ E+E L L+KVK+ R+ + + +T + V G Sbjct: 21 RIGKSGLTDSVVVELEGQLSSRSLVKVKVNRGLYPRDELKTVWNIMAEKTNSSVVFARGN 80 Query: 81 TLVLYR 86 V +R Sbjct: 81 VAVFWR 86 >UniRef50_A7C1L1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C1L1_9GAMM Length = 67 Score = 60.0 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%) Query: 33 VLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYR 86 +LA+++ LE HELIK++IA D+ + I E + + + A VQ+IG+ +LYR Sbjct: 1 MLAQLDCVLEDHELIKIRIAA-DKAERHKITEELCQASHAELVQIIGRVSILYR 53 >UniRef50_C6A1U4 Predicted RNA-binding protein, CRS1/YhbY family n=9 Tax=Thermococcaceae RepID=C6A1U4_THESM Length = 141 Score = 59.2 bits (143), Expect = 4e-08, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE----DRE 57 L K ++ ++ + ++P +G GL E V++EI L+ ++KV+I Sbjct: 7 RLPGKVRRAIRAKYYDIEPKAWVGRKGLEESVISEIATQLKKDGILKVEIRKGAFTSTNM 66 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYRPTK 89 + I E + T + + V GK +L+RP + Sbjct: 67 DRESIAEKVAELTDSELIDVRGKRFILFRPRE 98 >UniRef50_Q9YD21 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix RepID=Q9YD21_AERPE Length = 107 Score = 58.8 bits (142), Expect = 5e-08, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 13 GLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE----DRETKTLIVEAIVR 68 AH + V++G G+T VL EI+ LE E++KVK+ + + + + Sbjct: 9 RRAHHGRADVIIGKAGVTREVLREIDARLEKKEVVKVKMLKTALKREEGGRRELARRVAG 68 Query: 69 ETGACNVQVIGKTLVLYRPTK 89 GA + V G T +LYRP + Sbjct: 69 SLGARLMGVRGYTFILYRPRR 89 >UniRef50_A5UL37 RNA-binding protein, CRS1/YhbY family n=4 Tax=Methanobacteriaceae RepID=A5UL37_METS3 Length = 85 Score = 58.8 bits (142), Expect = 5e-08, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 37/66 (56%) Query: 24 LGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLV 83 +G G+ + V+ EI++ L+ +E++K+K A + K + IV++T + + V G V Sbjct: 20 IGKAGVNDNVIEEIKRQLKANEIVKLKFAKNIAKNKDDYIADIVQKTRSKLIDVRGNVAV 79 Query: 84 LYRPTK 89 +Y+ Sbjct: 80 IYKKKP 85 >UniRef50_Q8U0T5 Putative uncharacterized protein n=1 Tax=Pyrococcus furiosus RepID=Q8U0T5_PYRFU Length = 139 Score = 58.8 bits (142), Expect = 6e-08, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 4/92 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKI----ATEDRE 57 L K ++ L+ + ++P +G GL E V+ EIE L ++KV+I + Sbjct: 5 RLPGKIRRALRARYYDIEPKAWIGKRGLEESVIKEIENQLARTGVLKVEIRKGALIATKM 64 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYRPTK 89 T+ I E + T + ++V GK +L++P + Sbjct: 65 TRKQIAEKVAELTDSELLEVRGKRFILFKPRE 96 >UniRef50_UPI0001C41D91 RNA-binding protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41D91 Length = 71 Score = 58.0 bits (140), Expect = 8e-08, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 36/67 (53%) Query: 21 VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGK 80 + +G G+ + V+ EI++ L+ + +IK++ A K ++ +IV T + + V G Sbjct: 2 TINIGKAGVNDNVIEEIKRQLKSNPIIKLRFAKNVARNKDDLINSIVEGTKSQLIDVRGN 61 Query: 81 TLVLYRP 87 V+Y+ Sbjct: 62 VAVIYKK 68 >UniRef50_A3CX00 Putative uncharacterized protein n=2 Tax=Methanomicrobiales RepID=A3CX00_METMJ Length = 86 Score = 56.5 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%) Query: 16 HPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNV 75 LKP + +G G+T ++ EI + L+ +++KV+ E I GA V Sbjct: 7 QDLKPTIWIGKRGITNVMIDEIRRQLKDRKVVKVRWLRNTEVDP----EEIAASAGAVLV 62 Query: 76 QVIGKTLVL 84 +V G+TLVL Sbjct: 63 EVRGRTLVL 71 >UniRef50_A1RYP6 Putative uncharacterized protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RYP6_THEPD Length = 112 Score = 56.5 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%) Query: 20 PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET----KTLIVEAIVRETGACNV 75 PVV +G GL EGV+ EI LE ++KVK+ RET + I + GA + Sbjct: 38 PVVNVGKKGLDEGVIEEINNILESRGIVKVKLLKNFRETYGLSPEEVAVIISQRLGAEIL 97 Query: 76 QVIGKTLVLYRPTK 89 V G + +R + Sbjct: 98 GVRGFV-IAFRKRR 110 >UniRef50_D2RG85 Putative uncharacterized protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RG85_ARCPR Length = 74 Score = 55.0 bits (132), Expect = 8e-07, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%) Query: 21 VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE------TKTLIVEAIVRETGACN 74 + +G G+TEGV+ EI QALE H ++KV++ R + + + I + Sbjct: 3 TINIGKRGITEGVINEINQALEKHGMVKVRMLRNFRTITMKGMDRRELAKEIAKHVNGKL 62 Query: 75 VQVIGKTLVLYR 86 V + G L R Sbjct: 63 VDLRGFVLTFKR 74 >UniRef50_Q74MX7 NEQ428 n=1 Tax=Nanoarchaeum equitans RepID=Q74MX7_NANEQ Length = 104 Score = 52.7 bits (126), Expect = 4e-06, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 5 TKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE--DRETKTLI 62 K + L+ + +KP + +G +G+ + V+ +IE L+ E++KV I E + I Sbjct: 14 GKILRKLRSQYYDIKPTINIGKSGI-DKVIEQIENQLKVREVVKVTINKNILRMEDRFNI 72 Query: 63 VEAIVRETGA-CNVQVIGKTLVLYRPT 88 + + + + + + G+ +++ R + Sbjct: 73 AKQLQEKLKSGVIIDIRGRKILIARKS 99 >UniRef50_UPI0001698ED9 hypothetical protein Epers_16139 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698ED9 Length = 52 Score = 52.3 bits (125), Expect = 5e-06, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 47 IKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 IKVK+A D+ + + AI ++GA VQ+IG+ + YR E+K Sbjct: 1 IKVKLAGADKAEREQLSSAITEQSGAALVQIIGRVAIFYRANPEKK 46 >UniRef50_Q2FTK1 RNA-binding protein containing KH domain possibly ribosomal protein-like n=2 Tax=Methanomicrobiales RepID=Q2FTK1_METHJ Length = 82 Score = 52.3 bits (125), Expect = 5e-06, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 16 HPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNV 75 H LKP + +G G+++ +L EI+ ++ ++IKVK + E++ ++ + Sbjct: 11 HDLKPTIWIGKQGMSDTILDEIQNQIKVRKVIKVKWLSSVEIDP----ESVAAQSRTKLL 66 Query: 76 QVIGKTLVL 84 QV G+T+VL Sbjct: 67 QVRGRTMVL 75 >UniRef50_Q4JCL7 Conserved protein n=2 Tax=Sulfolobus RepID=Q4JCL7_SULAC Length = 87 Score = 51.9 bits (124), Expect = 6e-06, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 19 KPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVI 78 P + +G GL EG++ EI++ L+ H+++K++I D E + + + + A ++V Sbjct: 14 HPDIRIGKKGLNEGMVNEIKRRLKEHKVVKIRI-GADVEDRKSFAKEVADKVNAKLIEVR 72 Query: 79 GKTLVLYRPTKERKI 93 G T +L + K+ ++ Sbjct: 73 GYTFILAKEDKDDQV 87 >UniRef50_D2RYN4 Putative uncharacterized protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RYN4_9EURY Length = 82 Score = 51.9 bits (124), Expect = 7e-06, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Query: 9 QHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE--TKTLIVEAI 66 Q LK AH L V +G +G+ + V+ E++ L+ +L+KVK+ R + + Sbjct: 4 QELKQQAHDLDVTVWVGKSGI-DAVVDELDDQLDDRDLVKVKLLRAARAGGSTEEKAADL 62 Query: 67 VRETGACNVQVIGKTLVLYR 86 A ++ G T V YR Sbjct: 63 ADRVNAELIETRGHTAVFYR 82 >UniRef50_O28209 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus RepID=O28209_ARCFU Length = 75 Score = 50.0 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query: 21 VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE----TKTLIVEAIVRETGACNVQ 76 + +G NG+TE ++ EI LE +KV++ RE K + I + V Sbjct: 6 TINVGKNGVTESLINEINFLLEKRGAVKVRMLRNFRESSGKDKKELAREIASKVKGRLVD 65 Query: 77 VIGKTLVLYR 86 G L R Sbjct: 66 FRGFVLTFER 75 >UniRef50_A3DNH0 Putative uncharacterized protein n=2 Tax=Desulfurococcaceae RepID=A3DNH0_STAMF Length = 122 Score = 49.6 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Query: 22 VLLGSNGLTEGVLAEIEQALEHHELIKVKIA----TEDRETKTLIVEAIVRETGACNVQV 77 V LG GLT+G + E++ LE H ++K+++ + + I + GA ++V Sbjct: 29 VQLGKKGLTQGFINEVKARLEKHGVVKIRMLKSYVKSTNTDRRETAKIIAKVLGAKLIEV 88 Query: 78 IGKTLVLYRPTKE 90 G T ++ R + Sbjct: 89 RGYTFIIARNKDK 101 >UniRef50_Q0JCK3 Os04g0464800 protein n=10 Tax=Poaceae RepID=Q0JCK3_ORYSJ Length = 1042 Score = 49.6 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 3/88 (3%) Query: 2 NLSTKQKQHLKGLAHPLK--PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT-EDRET 58 LS +++ L+ A +K PV+ +G N + GV I+ + H L V I D Sbjct: 880 PLSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTP 939 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYR 86 ++ + TG+ V ++LYR Sbjct: 940 IQQLISELEEATGSVLVSREPNKVILYR 967 Score = 48.0 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 42/86 (48%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L + + L+G L+ + +G G+TEG++ I + + EL+K++ Sbjct: 139 LALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMK 198 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 E + R+TG + G T++LYR Sbjct: 199 RTHEILERKTGGLVIWRSGSTIILYR 224 >UniRef50_D1INN2 Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=4 Tax=rosids RepID=D1INN2_VITVI Length = 1028 Score = 47.3 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 43/86 (50%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L ++ + LKG+ ++ + +G G+TEG++ I + E++K++ + Sbjct: 184 LTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMK 243 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 + + R+TG + G ++LYR Sbjct: 244 RTHDILERKTGGLVIWRSGSYIILYR 269 Score = 45.3 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%) Query: 2 NLSTKQKQHLKGLAHPLK--PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET- 58 LS +++ L+ A +K PV+ +G + + GV I+ + H L V + + T Sbjct: 898 PLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTS 957 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYR 86 ++ + + TGA V ++LYR Sbjct: 958 VQEVIFKLEQATGAVLVSQEPSKVILYR 985 Score = 41.1 bits (96), Expect = 0.011, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ +++ L+ + +KP +LLG G+ +G + + ++ EL+K+ E + Sbjct: 606 ITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGV 665 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR 86 + E+G V V G +++YR Sbjct: 666 ARTLEAESGGILVAVERVSKGYAIIMYR 693 >UniRef50_C8SBP0 Putative uncharacterized protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SBP0_FERPL Length = 77 Score = 47.3 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 6/72 (8%) Query: 21 VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE------TKTLIVEAIVRETGACN 74 + +G G+T+ V+ EI LE ++KV++ R K + + I + Sbjct: 5 TINIGKKGITDEVIKEINATLEKKGIVKVRMLKNFRNFTAGGKHKKELAQEIASKVNGKL 64 Query: 75 VQVIGKTLVLYR 86 + G L R Sbjct: 65 IDFRGFVLTFKR 76 >UniRef50_A8MR13 Uncharacterized protein At4g31010.2 n=1 Tax=Arabidopsis thaliana RepID=A8MR13_ARATH Length = 341 Score = 46.5 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%) Query: 2 NLSTKQKQHLKGLAHPLKPV--VLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 +L+ +++ L L K V LG +GLT +L ++ +H E ++VK Sbjct: 158 SLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDM 217 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR-----PTKERKISL 95 ++ + +T V TLVLYR P K KI L Sbjct: 218 KNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPL 258 >UniRef50_Q9SGI0 T13O15.1 protein n=2 Tax=Arabidopsis thaliana RepID=Q9SGI0_ARATH Length = 1020 Score = 46.1 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 38/86 (44%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L + + L+ + L + +G G+TEG++ I + E++K+ R Sbjct: 164 LTLPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMK 223 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 + + +TG + G ++LYR Sbjct: 224 RTHDVLETKTGGLVIWRSGSKILLYR 249 Score = 43.8 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ +K L+ + +KP +LLG G+ +G + + ++ EL+K+ E + Sbjct: 588 ITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKV 647 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR 86 E + E+G V V G +++YR Sbjct: 648 AEILEAESGGILVAVEMVSKGYAIIVYR 675 >UniRef50_Q9LS51 Gb|AAF24608.1 n=7 Tax=Magnoliophyta RepID=Q9LS51_ARATH Length = 848 Score = 46.1 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 34/80 (42%) Query: 7 QKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAI 66 + + L+ L+ + + GLT+ V+ +I EL+++K E + Sbjct: 247 ELRRLRRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIV 306 Query: 67 VRETGACNVQVIGKTLVLYR 86 R TG + G +V+YR Sbjct: 307 ERRTGGMVIWRAGSVMVVYR 326 >UniRef50_Q8VYD9 CRS2-associated factor 1, mitochondrial n=8 Tax=Magnoliophyta RepID=CAF1M_ARATH Length = 405 Score = 45.7 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%) Query: 2 NLSTKQKQHLKGLAHPLKPV--VLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 +L+ +++ L L K V LG +GLT +L ++ +H E ++VK Sbjct: 158 SLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDM 217 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR-----PTKERKISL 95 ++ + +T V TLVLYR P K KI L Sbjct: 218 KNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPL 258 >UniRef50_Q5JK63 cDNA clone:J013093H11, full insert sequence n=8 Tax=Magnoliophyta RepID=Q5JK63_ORYSJ Length = 417 Score = 45.3 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L +++ +LK ++ V +G G+ GV+ + + HE +KV Sbjct: 172 LDGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEY 231 Query: 63 VEAIVRETGACNVQVIGK-TLVLYR 86 I R +G + IG T+V YR Sbjct: 232 ASEIARLSGGIPINTIGNDTIVFYR 256 >UniRef50_A9SZH0 Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SZH0_PHYPA Length = 1106 Score = 45.3 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 16/105 (15%) Query: 2 NLSTKQKQHLKGL--------AHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT 53 L+ KQ+QHL+ A+ +G L E + I L+ H +KV + Sbjct: 937 PLTRKQRQHLRQQIPLMLGRTAN-----FNIGKTTLYEDLAKSICAYLQKHPFVKVGVKG 991 Query: 54 EDR-ETKTLIVEAIVRETGACNVQVIGKTLVLYR--PTKERKISL 95 + + +VE I TGA V L+ YR P E + L Sbjct: 992 RPKGSSVASVVEQIEEHTGAVLVSTEPSKLIFYRGWPAGEERPDL 1036 Score = 40.7 bits (95), Expect = 0.016, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 35/86 (40%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L + + L+ L L+ + +G G+T G++ I EL KVK Sbjct: 323 LTLPEPELRRLRTLGLQLQGRLKIGRLGVTPGIVEAIHDRWRTSELAKVKCDAPLSMNMK 382 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 E + R TG + G V+YR Sbjct: 383 KAHEDLERLTGGLVIWRAGSAAVVYR 408 >UniRef50_Q5JK62 Group II intron splicing factor CRS1-like n=5 Tax=Magnoliophyta RepID=Q5JK62_ORYSJ Length = 394 Score = 44.9 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L +++ +LK ++ V +G G+ GV+ + + HE +KV Sbjct: 172 LDGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEY 231 Query: 63 VEAIVRETGACNVQVIGK-TLVLYR 86 I R +G + IG T+V YR Sbjct: 232 ASEIARLSGGIPINTIGNDTIVFYR 256 >UniRef50_Q84N49 CRS2-associated factor 1, chloroplastic n=3 Tax=Andropogoneae RepID=CAF1P_MAIZE Length = 674 Score = 44.9 bits (106), Expect = 9e-04, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 31/66 (46%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ + ++ H L P+ LG NG+ ++ ++ +A E +L++V + ++ I Sbjct: 303 LTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKI 362 Query: 63 VEAIVR 68 + Sbjct: 363 GAKLKD 368 >UniRef50_Q2R1U8 CRS1/YhbY domain containing protein, expressed n=3 Tax=Oryza sativa RepID=Q2R1U8_ORYSJ Length = 886 Score = 43.8 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L + + L+ LK + +G G+T ++ I + E++++K+ Sbjct: 174 LTLPEAELRRLRHAGMRLKSRIKVGGAGVTREIVERIRDRWRNDEVVRIKVTGTPALNMR 233 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 L E + R+TG + G ++ LYR Sbjct: 234 LFHEILERKTGGLVIWRSGTSVSLYR 259 Score = 38.8 bits (90), Expect = 0.059, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 ++ +++ + L +K +LLG G+ +G + + ++ EL+K+ + + Sbjct: 591 TITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKK 650 Query: 62 IVEAIVRETGACNVQV----IGKTLVLYR 86 I ++ E+G V V G +V++R Sbjct: 651 IALSLEAESGGILVSVDKVSKGYAIVVFR 679 >UniRef50_C5XAP2 Putative uncharacterized protein Sb02g022940 n=1 Tax=Sorghum bicolor RepID=C5XAP2_SORBI Length = 962 Score = 43.0 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 38/80 (47%) Query: 7 QKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAI 66 + + L+ A +K + +G G+T+ ++ I + + E++K++ + + Sbjct: 357 ELRRLRDTALRMKERIKVGPGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLL 416 Query: 67 VRETGACNVQVIGKTLVLYR 86 TG + G+++VLYR Sbjct: 417 EDRTGGVVIWRSGRSVVLYR 436 >UniRef50_Q657G7 CRS2-associated factor 2, chloroplastic n=7 Tax=Poaceae RepID=CAF2P_ORYSJ Length = 607 Score = 42.3 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 4/87 (4%) Query: 2 NLSTKQKQHLKG--LAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L+ + + L ++H + + +G +GLT +L I E+ KV+ Sbjct: 229 PLTAAEVRDLVKPHISHNRQ--LNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDM 286 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR 86 + + ++G + +G + LYR Sbjct: 287 KNLCYHLEEKSGGKVIHRVGGVVFLYR 313 >UniRef50_D2PDV9 Putative uncharacterized protein n=9 Tax=Sulfolobus RepID=D2PDV9_SULIS Length = 97 Score = 42.3 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 44/80 (55%) Query: 5 TKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVE 64 +++ + L + + +G G+TEG+L EI++ L H++IK+KI ++ + + + Sbjct: 3 SQEIKDLIKKTRAERADIRIGKYGVTEGMLNEIKRRLNEHKVIKIKIGIKEIDDRKEFAK 62 Query: 65 AIVRETGACNVQVIGKTLVL 84 + GA ++V G T +L Sbjct: 63 RVAEMVGAKLIEVRGYTFIL 82 >UniRef50_D1IJT2 Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1IJT2_VITVI Length = 529 Score = 42.3 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 6/101 (5%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ ++++ + + + +LLG G+ +GV+ + Q +H E++KV Sbjct: 336 ITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYT 395 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR-PTKERKISL-PR 97 + + E+G V + G +++YR R I L P+ Sbjct: 396 AKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPK 436 >UniRef50_Q5VMQ5 CRS2-associated factor 1, chloroplastic n=3 Tax=Oryza sativa RepID=CAF1P_ORYSJ Length = 701 Score = 41.5 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 32/85 (37%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ ++ L K + +G +GLT +L I + + K+K Sbjct: 184 PLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDN 243 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + + + G + G + L+R Sbjct: 244 VCQQLEEKVGGKVIHHQGGVIFLFR 268 Score = 38.0 bits (88), Expect = 0.085, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 31/66 (46%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ + + ++ L P+ LG NG+ ++ ++ +A E +L++V + ++ I Sbjct: 303 LTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKI 362 Query: 63 VEAIVR 68 + Sbjct: 363 GAKLKD 368 >UniRef50_UPI00019841A3 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI00019841A3 Length = 855 Score = 41.1 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 37/80 (46%) Query: 7 QKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAI 66 + + LK +A + + +G+ G+T+ ++ I + E++K+K E + Sbjct: 271 ELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEIL 330 Query: 67 VRETGACNVQVIGKTLVLYR 86 TG + G ++VLYR Sbjct: 331 ETRTGGLVIWRTGSSVVLYR 350 >UniRef50_B5IFI5 CRS1 / YhbY domain superfamily n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFI5_9EURY Length = 73 Score = 41.1 bits (96), Expect = 0.012, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Query: 16 HPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE-DRETKTLIVEAIVRETGACN 74 +K V +G G+T+GV EI++ L+ ++IK+K DRE T +E + ++ A Sbjct: 1 MDIKATVQIGKGGITDGVKREIKEQLKKRKIIKIKFLQNADRENFTEKIEKLAKDVNAEI 60 Query: 75 VQVIGKTLVLYRP 87 +++ G T VL + Sbjct: 61 LEIRGFTAVLKKR 73 >UniRef50_A8IUV5 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IUV5_CHLRE Length = 321 Score = 40.7 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%) Query: 20 PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK-----TLIVEAIVRETGACN 74 P+V LG +GL VL + A + EL+K++I R K T + A+ + TG Sbjct: 137 PLVRLGPSGLNASVLTSVASAWRNSELVKLRI--VSRANKYMPYITQVCAALEQRTGGLV 194 Query: 75 VQVIGKTLVLYR 86 V G ++ L+R Sbjct: 195 VWRAGGSIWLFR 206 >UniRef50_B5Y593 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y593_PHATR Length = 386 Score = 40.7 bits (95), Expect = 0.016, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 29 LTEGVLAEIEQALEHHELIKVKIATEDRETKTL--IVEAIVRETGACNVQVIGKTLVLYR 86 L + ++ L ELI +++ ++ K + I E A Q +G T++LYR Sbjct: 295 LQPEWMEALDDILWKEELICIRLNKAVKKKKEAKVLGTRIAAELTAHVAQTVGHTVLLYR 354 Query: 87 P 87 P Sbjct: 355 P 355 >UniRef50_Q6YYA3 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic n=3 Tax=Poaceae RepID=CRS1_ORYSJ Length = 725 Score = 39.9 bits (93), Expect = 0.022, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++++ + + + VLLG G+ EGV+ EI Q +H E++KV T Sbjct: 566 LTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQITYT 625 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR 86 + ETG + + ++LYR Sbjct: 626 SMMLEVETGGTLIAIERFTTSHAIILYR 653 >UniRef50_Q6K4E4 Os09g0363100 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6K4E4_ORYSJ Length = 947 Score = 39.6 bits (92), Expect = 0.029, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 38/80 (47%) Query: 7 QKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAI 66 + + L+ +A +K + +G G+T+ ++ I Q E++K++ + + Sbjct: 345 ELRRLRDVALRMKERMRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDIL 404 Query: 67 VRETGACNVQVIGKTLVLYR 86 TG + G+++VLYR Sbjct: 405 EERTGGIVIWRSGRSVVLYR 424 Score = 38.0 bits (88), Expect = 0.091, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 + +++ L+ + +K ++LG + +G + + +H EL+KV + + I Sbjct: 752 TDEERFLLRRIGLKMKAFLMLGRREVFDGTVQNMHLHWKHRELVKVLVKGKSFPQVKHIA 811 Query: 64 EAIVRETGACNVQV----IGKTLVLYRPT--KERKISLPR 97 ++ E+G + V G ++LYR K +I PR Sbjct: 812 ISLEAESGGVLISVDKTTKGYAIILYRGKNYKTPQILKPR 851 >UniRef50_Q9SU76 Putative uncharacterized protein AT4g29750 n=1 Tax=Arabidopsis thaliana RepID=Q9SU76_ARATH Length = 776 Score = 39.6 bits (92), Expect = 0.029, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ +++ + + + P +LLG + +G + + +H EL+KV + + I Sbjct: 605 ITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQVKHI 664 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR 86 ++ E+G V V G ++LYR Sbjct: 665 AISLEAESGGVLVSVDKTMKGYAIILYR 692 >UniRef50_Q9SL79 CRS2-associated factor 1, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=CAF1P_ARATH Length = 701 Score = 39.6 bits (92), Expect = 0.030, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 4/87 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPV--VLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L+ ++ + L + LK + +G +GLT +L I + + K+K Sbjct: 242 PLTKEEVREL--VTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDM 299 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR 86 + E + + G + G L L+R Sbjct: 300 DNVCEQLEEKIGGKVIYRRGGVLFLFR 326 >UniRef50_B5Y4T8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y4T8_PHATR Length = 192 Score = 39.6 bits (92), Expect = 0.030, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 16/105 (15%) Query: 2 NLSTKQKQHLKGL------AHPLKPVVLLGSNGLTE---GVLAEIEQALEHHELIKVK-I 51 +L+T Q + L+ ++ L V L + I L EL++V+ I Sbjct: 55 SLTTNQIKMLRKEMNKREASNQLSQVFLSADESFGPFSLETVQSIVAELTEQELVEVRGI 114 Query: 52 ATEDRETKTLIVEAIVRETGAC------NVQVIGKTLVLYRPTKE 90 + + + E + E G VQ+ G LYRP+++ Sbjct: 115 SRDRKRAVKTTSERLALELGMESGKNVSIVQIKGHAATLYRPSED 159 >UniRef50_A9S7Z4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S7Z4_PHYPA Length = 548 Score = 39.6 bits (92), Expect = 0.030, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 3/97 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ +Q LK L + K V +G G+ G + + + HE +++ +E + Sbjct: 225 LTPEQLYALKKLGYKNKNYVPVGRRGIYGGTIQNMHMHWKKHETVRIDCDNFPKEKIKEM 284 Query: 63 VEAIVRETGACNVQ-VIGKTLVLY--RPTKERKISLP 96 E + R +G + G T++++ R K K+ +P Sbjct: 285 GETLERLSGGIVIDIHQGTTIIMWRGRNYKRPKVDIP 321 >UniRef50_A2XVM7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2XVM7_ORYSI Length = 893 Score = 39.6 bits (92), Expect = 0.032, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 38/80 (47%) Query: 7 QKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAI 66 + + L+ +A +K + +G G+T+ ++ I Q E++K++ + + Sbjct: 344 ELRRLRDVALRMKERMRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDIL 403 Query: 67 VRETGACNVQVIGKTLVLYR 86 TG + G+++VLYR Sbjct: 404 EERTGGIVIWRSGRSVVLYR 423 Score = 38.0 bits (88), Expect = 0.099, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 + +++ L+ + +K ++LG + +G + + +H EL+KV + + I Sbjct: 697 TDEERFLLRRIGLKMKAFLMLGRREVFDGTVQNMHLHWKHRELVKVLVKGKSFPQVKHIA 756 Query: 64 EAIVRETGACNVQV----IGKTLVLYRPT--KERKISLPR 97 ++ E+G + V G ++LYR K +I PR Sbjct: 757 ISLEAESGGVLISVDKTTKGYAIILYRGKNYKTPQILKPR 796 >UniRef50_Q7XSB6 Os04g0492900 protein n=4 Tax=Oryza sativa RepID=Q7XSB6_ORYSJ Length = 479 Score = 39.6 bits (92), Expect = 0.033, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 12/106 (11%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ + + K V +G G+ +GV+ + + H+ ++V + T + I Sbjct: 179 LTPEEHFYFLKMGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPDEVKEI 238 Query: 63 VEAIVRETGACN--VQVIGKTLVLYR------PTKE---RKISLPR 97 + R +G +Q G T+++YR P E K++LPR Sbjct: 239 ASELARLSGGIVLDIQE-GNTIIMYRGKNYAQPPPEIMSPKVTLPR 283 >UniRef50_B9RSN8 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9RSN8_RICCO Length = 742 Score = 39.2 bits (91), Expect = 0.040, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ ++++ L+ + ++ +LLG G+ +GV+ + Q +H E++KV Sbjct: 594 MTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQVIRT 653 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR 86 + + ETG V + G +++YR Sbjct: 654 AKFLEAETGGILVSIDKLKEGHAIIIYR 681 >UniRef50_Q9FYT6 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic n=4 Tax=Poaceae RepID=CRS1_MAIZE Length = 715 Score = 39.2 bits (91), Expect = 0.041, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++K + + + +VLLG G+ +GV+ EI Q +H E++KV Sbjct: 564 LTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYA 623 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR 86 + ETG + V ++LYR Sbjct: 624 ASLLEVETGGILIAVEKLTTSHAIILYR 651 >UniRef50_Q9LDA9 CRS2-associated factor 2, chloroplastic n=6 Tax=rosids RepID=CAF2P_ARATH Length = 564 Score = 38.8 bits (90), Expect = 0.051, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 26/65 (40%) Query: 22 VLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKT 81 V LG +G T +L I + + KV+ + + +TG + +G Sbjct: 222 VNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEIIHRVGGV 281 Query: 82 LVLYR 86 + L+R Sbjct: 282 VYLFR 286 >UniRef50_UPI0001623CC4 predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001623CC4 Length = 463 Score = 38.8 bits (90), Expect = 0.052, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 30/72 (41%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ +L+ L L PV LG NG+ ++ ++ A + +L+KV + I Sbjct: 209 LTIEEANNLRKLGRELPPVCHLGKNGVYVNLVRDVRNAFKVDDLVKVDCKNMNPSDYKKI 268 Query: 63 VEAIVRETGACN 74 + Sbjct: 269 GAKLKDLVPCVL 280 Score = 38.0 bits (88), Expect = 0.086, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 34/85 (40%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L++ + + L A + LG +GLT +L + + + + KVK Sbjct: 90 PLTSAEVRELVTKARKEPRQINLGRDGLTHNMLNLVHEHWKRRRVCKVKCKGVPTVDMDN 149 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + +TG + G + L+R Sbjct: 150 VCRVLEEKTGGKIILRQGGAVYLFR 174 >UniRef50_D1I399 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=6 Tax=Embryophyta RepID=D1I399_VITVI Length = 723 Score = 38.4 bits (89), Expect = 0.072, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 34/85 (40%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ ++ + L K + +G +GLT +L I + + K+K Sbjct: 243 PLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDN 302 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + + +TG + G L L+R Sbjct: 303 VRQQLEEKTGGKVIYGKGGVLFLFR 327 >UniRef50_B9H8U8 Predicted protein n=3 Tax=rosids RepID=B9H8U8_POPTR Length = 977 Score = 38.0 bits (88), Expect = 0.098, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 42/87 (48%), Gaps = 5/87 (5%) Query: 5 TKQKQHL-KGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 + +++ L + + +KP + LG G+ +G + + ++ EL+K+ + + I Sbjct: 781 SDEERFLFRKIGLSMKPYLFLGRRGVFDGTIENMHLHWKYRELVKIIVERKGIAQVKHIA 840 Query: 64 EAIVRETGACNVQV----IGKTLVLYR 86 ++ E+G V V G +++YR Sbjct: 841 ISLEAESGGVLVSVDRTTKGYAIIVYR 867 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D0KVG6 Putative uncharacterized protein n=1 Tax=Halothi... 131 9e-30 UniRef50_B8CXY9 Putative uncharacterized protein n=1 Tax=Halothe... 128 6e-29 UniRef50_C1D4U0 CRS1_YhbY domain containing protein n=15 Tax=Pro... 127 9e-29 UniRef50_P71376 RNA-binding protein HI1333 n=269 Tax=Proteobacte... 126 2e-28 UniRef50_Q39US9 Putative uncharacterized protein n=5 Tax=Geobact... 124 7e-28 UniRef50_B7GKA7 Predicted RNA-binding protein containing KH doma... 124 8e-28 UniRef50_C7R8L3 Putative uncharacterized protein n=1 Tax=Kangiel... 124 1e-27 UniRef50_Q1K0N8 Putative uncharacterized protein n=1 Tax=Desulfu... 124 1e-27 UniRef50_P54454 Probable RNA-binding protein yqeI n=17 Tax=Firmi... 123 2e-27 UniRef50_B8FUR8 Putative uncharacterized protein n=4 Tax=Clostri... 121 7e-27 UniRef50_Q3SJR6 Putative uncharacterized protein n=2 Tax=Proteob... 121 9e-27 UniRef50_A1WXX4 Putative uncharacterized protein n=1 Tax=Halorho... 119 2e-26 UniRef50_A8VU66 Cation antiporter n=4 Tax=Bacillales RepID=A8VU6... 118 4e-26 UniRef50_C3RQM1 Cation antiporter n=5 Tax=Bacteria RepID=C3RQM1_... 118 7e-26 UniRef50_D0LJW9 Putative uncharacterized protein n=1 Tax=Haliang... 118 8e-26 UniRef50_B5JX32 Putative uncharacterized protein n=1 Tax=gamma p... 118 8e-26 UniRef50_B9ZLQ7 Putative uncharacterized protein n=1 Tax=Thioalk... 117 9e-26 UniRef50_B3E4L2 Putative uncharacterized protein n=6 Tax=Deltapr... 117 1e-25 UniRef50_Q3BUR9 Putative uncharacterized protein n=20 Tax=Xantho... 117 1e-25 UniRef50_C5SEC6 Putative uncharacterized protein n=1 Tax=Allochr... 117 1e-25 UniRef50_C2CFN8 RNA binding protein n=5 Tax=Clostridiales Family... 116 2e-25 UniRef50_B1HUI3 UPF0044 protein n=9 Tax=Bacillales RepID=B1HUI3_... 116 2e-25 UniRef50_B6BX40 CRS1 / YhbY domain superfamily n=2 Tax=Nitrosoco... 116 3e-25 UniRef50_B1KZR2 CRS1/YhbY domain protein n=24 Tax=Bacteria RepID... 115 3e-25 UniRef50_B1ZUH5 Putative uncharacterized protein n=2 Tax=Opituta... 115 4e-25 UniRef50_Q0A767 Putative uncharacterized protein n=2 Tax=Ectothi... 115 5e-25 UniRef50_D1YMG0 RNA-binding protein, YhbY family n=3 Tax=Veillon... 115 5e-25 UniRef50_C6MBV6 Putative uncharacterized protein n=1 Tax=Nitroso... 115 6e-25 UniRef50_C4Z0A1 Putative RNA-binding protein containing KH domai... 114 1e-24 UniRef50_B7C8W0 Putative uncharacterized protein n=1 Tax=Eubacte... 113 2e-24 UniRef50_Q82WX8 Uncharacterized protein family UPF0044 n=2 Tax=N... 113 2e-24 UniRef50_C8NFJ8 RNA-binding protein YhbY n=2 Tax=Granulicatella ... 113 2e-24 UniRef50_Q31HG7 Putative uncharacterized protein n=1 Tax=Thiomic... 112 3e-24 UniRef50_UPI0000E87C63 hypothetical protein MB2181_02825 n=1 Tax... 112 3e-24 UniRef50_Q2S2W7 CRS1 / YhbY domain superfamily n=1 Tax=Salinibac... 112 3e-24 UniRef50_A6T082 Uncharacterized conserved protein n=4 Tax=Betapr... 112 4e-24 UniRef50_Q47HI3 Putative uncharacterized protein n=7 Tax=Betapro... 111 6e-24 UniRef50_Q607B1 Putative uncharacterized protein n=1 Tax=Methylo... 111 9e-24 UniRef50_A6EYL2 Predicted RNA-binding protein containing KH doma... 110 1e-23 UniRef50_A9HYV3 Putative uncharacterized protein n=5 Tax=Bordete... 110 1e-23 UniRef50_D2MM12 RNA-binding protein, YhbY family n=1 Tax=Bulleid... 110 1e-23 UniRef50_P95453 Probable RNA-binding protein PA4753 n=18 Tax=Gam... 110 2e-23 UniRef50_B2V0A9 CRS1/YhbY domain protein n=22 Tax=Firmicutes Rep... 110 2e-23 UniRef50_C9YA67 RNA-binding protein HI1333 n=10 Tax=Betaproteoba... 110 2e-23 UniRef50_D1D4Q5 RNA-binding protein n=21 Tax=Neisseria RepID=D1D... 109 2e-23 UniRef50_D1VUN4 RNA-binding protein YhbY n=1 Tax=Peptoniphilus l... 109 2e-23 UniRef50_B1XUM7 Putative uncharacterized protein n=2 Tax=Polynuc... 109 2e-23 UniRef50_D1KBJ6 RNA-binding protein n=3 Tax=Gammaproteobacteria ... 109 3e-23 UniRef50_A0LDZ2 Putative uncharacterized protein n=2 Tax=Proteob... 108 5e-23 UniRef50_C8PXU7 23S rRNA methyltransferase J n=4 Tax=Moraxellace... 108 5e-23 UniRef50_C0PR74 Putative uncharacterized protein n=1 Tax=Picea s... 108 6e-23 UniRef50_B9MRC0 Putative uncharacterized protein n=2 Tax=Clostri... 108 6e-23 UniRef50_A5EXB7 YhbY family protein n=2 Tax=Cardiobacteriaceae R... 108 6e-23 UniRef50_B8DU23 Putative uncharacterized protein n=5 Tax=Actinob... 108 6e-23 UniRef50_C9XNP1 Putative uncharacterized protein n=7 Tax=Clostri... 108 7e-23 UniRef50_C3W9Y6 Putative uncharacterized protein n=1 Tax=Fusobac... 108 8e-23 UniRef50_Q1DDA8 Putative uncharacterized protein n=1 Tax=Myxococ... 107 9e-23 UniRef50_C4KVI2 CRS1 n=80 Tax=Betaproteobacteria RepID=C4KVI2_BURPS 106 2e-22 UniRef50_Q0EZJ5 Putative uncharacterized protein n=1 Tax=Maripro... 106 2e-22 UniRef50_Q5P1G1 Predicted RNA-binding protein containing KH doma... 106 2e-22 UniRef50_C9LL05 RNA-binding protein YhbY n=1 Tax=Dialister invis... 106 2e-22 UniRef50_B4X4Q0 CRS1 / YhbY domain superfamily n=2 Tax=Alcanivor... 105 3e-22 UniRef50_C7RKS5 Putative uncharacterized protein n=1 Tax=Candida... 105 4e-22 UniRef50_B5ENR6 Putative uncharacterized protein n=2 Tax=Acidith... 105 4e-22 UniRef50_Q03J88 Predicted RNA-binding protein containing KH doma... 105 4e-22 UniRef50_C2HJU9 RNA binding protein n=3 Tax=Clostridiales Family... 105 5e-22 UniRef50_A0Z550 Predicted RNA-binding protein containing KH doma... 105 5e-22 UniRef50_A9S9R6 Predicted protein n=1 Tax=Physcomitrella patens ... 105 7e-22 UniRef50_Q03GA6 RNA-binding protein, KH domain n=26 Tax=Lactobac... 104 7e-22 UniRef50_D2RB57 RNA-binding protein, YhbY family n=17 Tax=Actino... 104 9e-22 UniRef50_A0Q5D2 RNA-binding protein n=21 Tax=Gammaproteobacteria... 104 1e-21 UniRef50_B2HXD4 Predicted RNA-binding protein containing KH doma... 104 1e-21 UniRef50_Q1MZR4 Putative uncharacterized protein n=3 Tax=Gammapr... 103 1e-21 UniRef50_D1PPV8 Transcription-repair coupling factor n=1 Tax=Sub... 103 1e-21 UniRef50_C4FU95 Putative uncharacterized protein n=1 Tax=Catonel... 103 1e-21 UniRef50_B4D0Q3 Putative uncharacterized protein n=1 Tax=Chthoni... 103 2e-21 UniRef50_C1AC38 Putative uncharacterized protein n=1 Tax=Gemmati... 103 2e-21 UniRef50_UPI0001A7B00B RNA binding n=1 Tax=Arabidopsis thaliana ... 103 2e-21 UniRef50_A9B571 Putative uncharacterized protein n=1 Tax=Herpeto... 103 3e-21 UniRef50_C5BQ04 RNA-binding protein, translation initiation fact... 103 3e-21 UniRef50_Q4JMW4 Putative uncharacterized protein n=1 Tax=uncultu... 102 3e-21 UniRef50_A8ZX30 Putative uncharacterized protein n=2 Tax=Bacteri... 101 5e-21 UniRef50_A6GAH3 Putative uncharacterized protein n=1 Tax=Plesioc... 101 6e-21 UniRef50_C9N0K7 RNA-binding protein YhbY n=4 Tax=Bacteria RepID=... 100 1e-20 UniRef50_A9WDQ0 Putative uncharacterized protein n=2 Tax=Chlorof... 100 2e-20 UniRef50_C5V7C4 Putative uncharacterized protein n=2 Tax=Gallion... 100 2e-20 UniRef50_Q8TUY0 Predicted RNA-binding protein containing KH doma... 100 2e-20 UniRef50_C6TB79 Putative uncharacterized protein n=1 Tax=Glycine... 100 2e-20 UniRef50_D1IXC2 Whole genome shotgun sequence of line PN40024, s... 99 4e-20 UniRef50_B6T8H1 CRS1 / YhbY domain containing protein n=5 Tax=Po... 99 5e-20 UniRef50_C6JNB7 Putative uncharacterized protein n=5 Tax=Fusobac... 98 5e-20 UniRef50_C6NUK8 Putative uncharacterized protein n=1 Tax=Acidith... 98 6e-20 UniRef50_C2KVY9 RNA binding protein n=1 Tax=Oribacterium sinus F... 98 6e-20 UniRef50_C0QM00 Putative uncharacterized protein n=1 Tax=Desulfo... 98 1e-19 UniRef50_B6BWT9 CRS1 / YhbY domain superfamily n=1 Tax=beta prot... 97 1e-19 UniRef50_A5TU14 Possible RNA binding protein n=8 Tax=Fusobacteri... 97 1e-19 UniRef50_Q2IMK4 Putative uncharacterized protein n=5 Tax=Myxococ... 97 2e-19 UniRef50_Q9FW07 Os10g0512500 protein n=2 Tax=Oryza sativa RepID=... 96 3e-19 UniRef50_Q6AML8 Putative uncharacterized protein n=1 Tax=Desulfo... 96 3e-19 UniRef50_D1AKP9 Putative uncharacterized protein n=1 Tax=Sebalde... 95 5e-19 UniRef50_C7TK22 RNA-binding protein n=8 Tax=Lactobacillus RepID=... 95 7e-19 UniRef50_C9KQ51 CRS1 / YhbY domain protein n=1 Tax=Mitsuokella m... 94 1e-18 UniRef50_D1AXZ7 Putative uncharacterized protein n=1 Tax=Strepto... 94 1e-18 UniRef50_B9HRH4 Predicted protein (Fragment) n=4 Tax=rosids RepI... 94 1e-18 UniRef50_C8NZI1 RNA-binding protein YhbY n=1 Tax=Erysipelothrix ... 93 3e-18 UniRef50_Q38VT8 Putative uncharacterized protein n=1 Tax=Lactoba... 93 4e-18 UniRef50_Q58068 Probable RNA-binding protein MJ0652 n=11 Tax=Met... 92 8e-18 UniRef50_C8QYL8 Putative uncharacterized protein n=1 Tax=Desulfu... 86 3e-16 UniRef50_B5JKD4 CRS1 / YhbY domain superfamily n=1 Tax=Verrucomi... 86 4e-16 UniRef50_D1INN2 Whole genome shotgun sequence of line PN40024, s... 85 1e-15 UniRef50_Q0JCK3 Os04g0464800 protein n=10 Tax=Poaceae RepID=Q0JC... 84 1e-15 UniRef50_Q9SGI0 T13O15.1 protein n=2 Tax=Arabidopsis thaliana Re... 84 2e-15 UniRef50_A8MR13 Uncharacterized protein At4g31010.2 n=1 Tax=Arab... 83 2e-15 UniRef50_C4V0X4 RNA binding protein n=2 Tax=Selenomonas RepID=C4... 83 3e-15 UniRef50_Q8VYD9 CRS2-associated factor 1, mitochondrial n=8 Tax=... 82 6e-15 UniRef50_B9XGY3 Putative uncharacterized protein n=1 Tax=bacteri... 82 7e-15 UniRef50_A8TFT3 Putative uncharacterized protein n=1 Tax=Methano... 81 1e-14 UniRef50_A8ICQ7 Predicted protein n=1 Tax=Chlamydomonas reinhard... 79 4e-14 UniRef50_Q0W1M5 Putative uncharacterized protein n=2 Tax=Euryarc... 79 4e-14 UniRef50_B9RHB6 Putative uncharacterized protein n=1 Tax=Ricinus... 78 6e-14 UniRef50_Q2R1U8 CRS1/YhbY domain containing protein, expressed n... 78 6e-14 UniRef50_Q5JK63 cDNA clone:J013093H11, full insert sequence n=8 ... 77 2e-13 UniRef50_Q5JK62 Group II intron splicing factor CRS1-like n=5 Ta... 76 3e-13 UniRef50_Q12W46 RNA-binding protein n=4 Tax=Methanosarcinaceae R... 76 3e-13 UniRef50_Q9LS51 Gb|AAF24608.1 n=7 Tax=Magnoliophyta RepID=Q9LS51... 76 4e-13 UniRef50_A2BN52 Conserved archaeal protein n=1 Tax=Hyperthermus ... 75 6e-13 UniRef50_C1VAK9 Predicted RNA-binding protein containing KH doma... 75 7e-13 UniRef50_C6A1U4 Predicted RNA-binding protein, CRS1/YhbY family ... 75 7e-13 UniRef50_A6DTJ2 Putative uncharacterized protein n=1 Tax=Lentisp... 74 1e-12 UniRef50_Q8U0T5 Putative uncharacterized protein n=1 Tax=Pyrococ... 74 2e-12 UniRef50_A9SZH0 Predicted protein n=2 Tax=Physcomitrella patens ... 72 5e-12 UniRef50_A5UL37 RNA-binding protein, CRS1/YhbY family n=4 Tax=Me... 72 7e-12 UniRef50_A3CX00 Putative uncharacterized protein n=2 Tax=Methano... 72 9e-12 UniRef50_UPI0001C41D91 RNA-binding protein n=1 Tax=Methanobrevib... 71 1e-11 UniRef50_Q9YD21 Putative uncharacterized protein n=1 Tax=Aeropyr... 71 1e-11 UniRef50_Q9P9D4 RNA-binding protein n=1 Tax=uncultured marine gr... 70 2e-11 UniRef50_D2RG85 Putative uncharacterized protein n=1 Tax=Archaeo... 68 8e-11 UniRef50_A1RYP6 Putative uncharacterized protein n=1 Tax=Thermof... 67 3e-10 UniRef50_D2RYN4 Putative uncharacterized protein n=1 Tax=Haloter... 65 5e-10 UniRef50_Q2FTK1 RNA-binding protein containing KH domain possibl... 65 6e-10 UniRef50_Q4JCL7 Conserved protein n=2 Tax=Sulfolobus RepID=Q4JCL... 65 8e-10 UniRef50_Q74MX7 NEQ428 n=1 Tax=Nanoarchaeum equitans RepID=Q74MX... 65 9e-10 UniRef50_Q84N49 CRS2-associated factor 1, chloroplastic n=3 Tax=... 64 1e-09 UniRef50_O28209 Putative uncharacterized protein n=1 Tax=Archaeo... 63 2e-09 UniRef50_A3DNH0 Putative uncharacterized protein n=2 Tax=Desulfu... 62 4e-09 UniRef50_C8SBP0 Putative uncharacterized protein n=1 Tax=Ferrogl... 61 1e-08 UniRef50_A7C1L1 Putative uncharacterized protein n=1 Tax=Beggiat... 60 2e-08 UniRef50_UPI0001698ED9 hypothetical protein Epers_16139 n=1 Tax=... 53 2e-06 Sequences not found previously or not previously below threshold: UniRef50_C5XAP2 Putative uncharacterized protein Sb02g022940 n=1... 72 4e-12 UniRef50_A9S7Z4 Predicted protein n=1 Tax=Physcomitrella patens ... 69 4e-11 UniRef50_Q6K4E4 Os09g0363100 protein n=2 Tax=Oryza sativa Japoni... 69 4e-11 UniRef50_UPI00019841A3 PREDICTED: hypothetical protein n=1 Tax=V... 69 5e-11 UniRef50_A2XVM7 Putative uncharacterized protein n=1 Tax=Oryza s... 69 5e-11 UniRef50_Q657G7 CRS2-associated factor 2, chloroplastic n=7 Tax=... 68 7e-11 UniRef50_Q5VMQ5 CRS2-associated factor 1, chloroplastic n=3 Tax=... 67 1e-10 UniRef50_Q9SL79 CRS2-associated factor 1, chloroplastic n=1 Tax=... 67 2e-10 UniRef50_D1I399 Whole genome shotgun sequence of line PN40024, s... 66 3e-10 UniRef50_Q0DCP4 Os06g0304500 protein n=8 Tax=Magnoliophyta RepID... 65 6e-10 UniRef50_Q7XSB6 Os04g0492900 protein n=4 Tax=Oryza sativa RepID=... 65 6e-10 UniRef50_B9IC46 Predicted protein n=2 Tax=Populus trichocarpa Re... 64 1e-09 UniRef50_UPI0001623CC4 predicted protein n=1 Tax=Physcomitrella ... 63 3e-09 UniRef50_Q9FFU1 CRS2-associated factor 2, mitochondrial n=8 Tax=... 63 4e-09 UniRef50_Q9LS85 Emb|CAB10230.1 n=10 Tax=Magnoliophyta RepID=Q9LS... 62 5e-09 UniRef50_Q67XL4 Uncharacterized CRM domain-containing protein At... 62 5e-09 UniRef50_B9H8U8 Predicted protein n=3 Tax=rosids RepID=B9H8U8_POPTR 62 8e-09 UniRef50_D1IJT2 Whole genome shotgun sequence of line PN40024, s... 62 8e-09 UniRef50_O23307 Putative uncharacterized protein AT4g14510 n=2 T... 62 9e-09 UniRef50_B9RSN8 Putative uncharacterized protein n=1 Tax=Ricinus... 61 9e-09 UniRef50_D1I5A1 Whole genome shotgun sequence of line PN40024, s... 60 2e-08 UniRef50_Q9SU76 Putative uncharacterized protein AT4g29750 n=1 T... 60 2e-08 UniRef50_Q6YYA3 Chloroplastic group IIA intron splicing facilita... 60 2e-08 UniRef50_Q9LDA9 CRS2-associated factor 2, chloroplastic n=6 Tax=... 60 3e-08 UniRef50_D1I019 Whole genome shotgun sequence of line PN40024, s... 60 3e-08 UniRef50_Q9FYT6 Chloroplastic group IIA intron splicing facilita... 58 8e-08 UniRef50_A9RCK3 Predicted protein n=1 Tax=Physcomitrella patens ... 57 2e-07 UniRef50_A9S0V6 Predicted protein (Fragment) n=1 Tax=Physcomitre... 55 6e-07 UniRef50_A9S0V5 Predicted protein (Fragment) n=1 Tax=Physcomitre... 54 1e-06 UniRef50_B9N252 Predicted protein n=1 Tax=Populus trichocarpa Re... 54 2e-06 UniRef50_D1I8L3 Whole genome shotgun sequence of line PN40024, s... 53 2e-06 UniRef50_A5B9B9 Putative uncharacterized protein (Fragment) n=1 ... 53 2e-06 UniRef50_D2PDV9 Putative uncharacterized protein n=9 Tax=Sulfolo... 53 3e-06 UniRef50_A8IUV5 Predicted protein n=1 Tax=Chlamydomonas reinhard... 53 4e-06 UniRef50_Q9LF10 Chloroplastic group IIA intron splicing facilita... 51 1e-05 UniRef50_B5IFI5 CRS1 / YhbY domain superfamily n=2 Tax=Acidulipr... 49 5e-05 UniRef50_A8IV56 Predicted protein n=1 Tax=Chlamydomonas reinhard... 42 0.007 UniRef50_B5Y593 Predicted protein n=1 Tax=Phaeodactylum tricornu... 41 0.011 UniRef50_B5Y4T8 Predicted protein n=1 Tax=Phaeodactylum tricornu... 40 0.024 >UniRef50_D0KVG6 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVG6_HALNC Length = 106 Score = 131 bits (330), Expect = 9e-30, Method: Composition-based stats. Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 1/98 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQKQ L+ AH L PVVLLG +GLT+ V+AEIE AL HELIKV+I +DR+ K Sbjct: 1 MALTNKQKQFLRAQAHHLNPVVLLGQHGLTDAVMAEIELALSIHELIKVRIPGQDRDDKK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE-RKISLPR 97 +++ I TG+ VQ +G V YRP + +++LP+ Sbjct: 61 NMMQQIATTTGSELVQSVGHIAVFYRPDPDGTRLALPK 98 >UniRef50_B8CXY9 Putative uncharacterized protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXY9_HALOH Length = 96 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ+ +L+ A+ L PV+ +G +G+T +L +++ AL+ HELIK ++ Sbjct: 2 LTGKQRSYLRSEANNLNPVIHIGKDGITPSLLNQVDAALDDHELIKCRVLKNSLGEPRSF 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKI-SLP 96 + I + VQVIG VL+R +E I LP Sbjct: 62 ADEISSQLNCDVVQVIGNVFVLFRRNEEEPIYILP 96 >UniRef50_C1D4U0 CRS1_YhbY domain containing protein n=15 Tax=Proteobacteria RepID=C1D4U0_LARHH Length = 106 Score = 127 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 46/96 (47%), Positives = 70/96 (72%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ +Q+Q+LKGLAH L PVV++G+NGL++ V+ EI L+ HELIKV++ +DRE + Sbjct: 3 IELTPEQRQYLKGLAHALNPVVMIGNNGLSDSVIREIAVNLDAHELIKVRVHGDDREVRA 62 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 + I + A VQ+IGK LV+YRP+ +++ISLP Sbjct: 63 ALYGQICDDLDAAPVQMIGKLLVIYRPSDKQRISLP 98 >UniRef50_P71376 RNA-binding protein HI1333 n=269 Tax=Proteobacteria RepID=Y1333_HAEIN Length = 99 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 72/96 (75%), Positives = 77/96 (80%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 LSTKQKQ LKGLAH L PVV+LG NGLTEGVLAEIE AL HHELIKVK+A DRETK L Sbjct: 3 TLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQL 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 I+ AIVRET A VQ IG LVLYRP++E KI LPR Sbjct: 63 IINAIVRETKAAQVQTIGHILVLYRPSEEAKIQLPR 98 >UniRef50_Q39US9 Putative uncharacterized protein n=5 Tax=Geobacter RepID=Q39US9_GEOMG Length = 139 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 59/95 (62%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+G+ H L PV+ +G ++ ++ E +ALEHHELIKVKI + + Sbjct: 43 LTGKQKRFLRGMGHSLNPVITVGKGEISTPLVRETSEALEHHELIKVKILESCIMDRHEV 102 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + + + GA QV+G+T +LYR +E K+ LP+ Sbjct: 103 ADELAKACGAEVAQVLGRTFLLYRKAEEPKLELPK 137 >UniRef50_B7GKA7 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=211 Tax=Firmicutes RepID=B7GKA7_ANOFW Length = 97 Score = 124 bits (313), Expect = 8e-28, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+ LAH L P+ +G G+ + ++ +I ALE ELIKV + E K ++ Sbjct: 2 LTGKQKRFLRSLAHHLTPIFQVGKGGVNDNMIKQIADALEARELIKVSVLKNCEEEKEVV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISLPR 97 E + GA VQ+IG T+VLY+ ++E ++I LP+ Sbjct: 62 AEQLAEGAGAEVVQLIGHTIVLYKESREHKQIVLPK 97 >UniRef50_C7R8L3 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8L3_KANKD Length = 109 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 46/96 (47%), Positives = 66/96 (68%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 LS Q + L+G AH LKP+V++G+NG+T+ VL EI AL HHELIK+K+ E+RE K Sbjct: 14 QLSNNQVKFLRGKAHSLKPIVMVGANGVTDNVLEEINIALNHHELIKIKVRAEEREDKQA 73 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 +++ I ++T A +QVIG L +YR + KI LP+ Sbjct: 74 MIDHICQQTKAAKIQVIGHNLSIYRKSANPKIILPK 109 >UniRef50_Q1K0N8 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0N8_DESAC Length = 101 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 64/97 (65%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + LS KQ + L+GL H L PVVL+G + +++GV+ +E+ L+ HELIKVK+ + Sbjct: 4 VTLSGKQNRFLRGLGHHLNPVVLIGKDAVSQGVIDSVEEVLDQHELIKVKLLEGCLVDRK 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + E + T + VQ++G+T++L+RPT E KI LP+ Sbjct: 64 NVAEQLSTTTDSSVVQILGRTILLFRPTPEGKIELPK 100 >UniRef50_P54454 Probable RNA-binding protein yqeI n=17 Tax=Firmicutes RepID=YQEI_BACSU Length = 96 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+ AH L P+ +G G+ + ++ +I +ALE ELIKV + E K + Sbjct: 2 LTGKQKRFLRSKAHHLTPIFQVGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKNDV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLP 96 EA+V+ + + VQ IG T+VLY+ +KE K I LP Sbjct: 62 AEALVKGSRSQLVQTIGNTIVLYKESKENKQIELP 96 >UniRef50_B8FUR8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B8FUR8_DESHD Length = 97 Score = 121 bits (305), Expect = 7e-27, Method: Composition-based stats. Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK L+ L + + P++ +G G+TE V+A+ ++ LE ELIK ++ E Sbjct: 2 LTGKQKGFLRSLGNEMDPILQIGKGGVTEAVIAQTDETLEARELIKGRVLPNSMEDVQSA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLPR 97 + T A VQVIG+ +LYR +K++ I LPR Sbjct: 62 AAELAERTSAELVQVIGRNFLLYRESKKKPMIDLPR 97 >UniRef50_Q3SJR6 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=Q3SJR6_THIDA Length = 98 Score = 121 bits (304), Expect = 9e-27, Method: Composition-based stats. Identities = 45/95 (47%), Positives = 64/95 (67%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ Q+Q+L+GLAH +PVV++ GLT VL EIE+AL HELIK+K A+++ E + Sbjct: 3 PLTPAQRQYLRGLAHNRQPVVMIRGQGLTPAVLKEIERALAAHELIKIKAASDESEVRRA 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 + I +GA VQ IGK LV+YRP + +I+LP Sbjct: 63 WLTEICAASGAEPVQQIGKVLVIYRPAAKPEITLP 97 >UniRef50_A1WXX4 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXX4_HALHL Length = 118 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 45/95 (47%), Positives = 61/95 (64%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L Q + L+ L H LKPVVL G+ GL+EGVL EIE+AL+ HELIKVK+A +E + Sbjct: 23 MQLDPDQLKQLRRLGHALKPVVLTGAAGLSEGVLEEIERALDDHELIKVKLAGASKEERQ 82 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 + I +TGA VQ IG+ ++LY+ E+ L Sbjct: 83 AMTTEIAEQTGAVVVQTIGRIVLLYQENPEKSQVL 117 >UniRef50_A8VU66 Cation antiporter n=4 Tax=Bacillales RepID=A8VU66_9BACI Length = 97 Score = 118 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS KQK++L+G AH LK + +G G+ ++ ++ +ALE ELIKV I E K + Sbjct: 2 LSGKQKRYLRGEAHSLKAIFQVGKAGVNANLIKQVGEALEARELIKVSILQNCSEDKHDV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLPR 97 + A VQ+IG T++LY+ ++E K I LPR Sbjct: 62 ARELSEGADAETVQIIGNTIILYKESEENKTIELPR 97 >UniRef50_C3RQM1 Cation antiporter n=5 Tax=Bacteria RepID=C3RQM1_9MOLU Length = 95 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 60/94 (63%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK++L+G+AH L + +G G+ + + I+ ALE HELIKVKI ++K I Sbjct: 2 LTGKQKRYLRGIAHNLNAIFQIGKEGVHQTQIEGIDDALEAHELIKVKILESCADSKNEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 + +T A VQ++G+T++LYRP+++ LP Sbjct: 62 ALELSMKTKADVVQILGRTIILYRPSEKEIYKLP 95 >UniRef50_D0LJW9 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJW9_HALO1 Length = 101 Score = 118 bits (296), Expect = 8e-26, Method: Composition-based stats. Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 5/101 (4%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATED----R 56 M L+ KQ++ L+ H L +V +G G++E + + AL+ HELIK+++ + Sbjct: 1 MPLTGKQRRFLRARGHGLSAIVQMGKEGMSEAFVHAVSSALDDHELIKIRLGQNSLHETK 60 Query: 57 ETKTLIVEAIVRETGACNVQVIGKTLVLYRPTK-ERKISLP 96 + E + R+T + QV+G TL+LYR E +I LP Sbjct: 61 SDRRSTAEELARQTESEVAQVLGNTLLLYRRHPEEPRIELP 101 >UniRef50_B5JX32 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JX32_9GAMM Length = 99 Score = 118 bits (296), Expect = 8e-26, Method: Composition-based stats. Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 1/98 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LS KQ +HL+GLAH LKPVV++G NGL+E V+ EI AL HELIKVK++ + + Sbjct: 1 MQLSNKQIKHLRGLAHDLKPVVMVGQNGLSENVIEEIRGALTFHELIKVKVSGYEGSDRQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER-KISLPR 97 IVE I E A ++Q IGK +VL++ + KI +P+ Sbjct: 61 EIVEQICNEQKATHIQSIGKMVVLFKRNPNKIKIEIPK 98 >UniRef50_B9ZLQ7 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLQ7_9GAMM Length = 108 Score = 117 bits (295), Expect = 9e-26, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 1/96 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 +NL+ Q++HL+ LAHP KP+V +G NGLT+ V+ E+EQAL HHEL+K+K+ DRE + Sbjct: 10 VNLTDAQRRHLRSLAHPRKPIVTIGRNGLTDAVVKELEQALAHHELVKIKVNIGDREARN 69 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK-ERKISL 95 VE + TG VQ IG L+R E K++L Sbjct: 70 GTVEDLCERTGGALVQRIGYVATLFRRNPDEPKVTL 105 >UniRef50_B3E4L2 Putative uncharacterized protein n=6 Tax=Deltaproteobacteria RepID=B3E4L2_GEOLS Length = 109 Score = 117 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 44/94 (46%), Positives = 58/94 (61%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+HL+GL H LKPV+L+G L E ++AE E AL HELIKVK+ + Sbjct: 12 LTGKQKRHLRGLGHSLKPVILIGKKELDEALIAETEAALACHELIKVKVLENCMLDRHEA 71 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 EA+ TG+ QV+GKT +LYR + I LP Sbjct: 72 AEALSEATGSDVAQVLGKTFLLYRAAVKPVIVLP 105 >UniRef50_Q3BUR9 Putative uncharacterized protein n=20 Tax=Xanthomonadaceae RepID=Q3BUR9_XANC5 Length = 101 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 68/96 (70%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++ Q + L+G AH LK ++ G G+T LAE+E+ LE HEL+KVK+A+EDRET+ + Sbjct: 5 LTSAQNRFLRGQAHDLKALLQTGGKGVTPAFLAELEEVLERHELVKVKVASEDRETRDAL 64 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK-ISLPR 97 + ++ +TG+ VQ IG +LYRP+KE++ I LPR Sbjct: 65 IAELIEQTGSALVQRIGHVAILYRPSKEKRQIVLPR 100 >UniRef50_C5SEC6 Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SEC6_CHRVI Length = 100 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 2/99 (2%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M ++ KQK+ LK H LKPVVL+G G+TE VLAEIE AL+HHELIKV+I DR+ + Sbjct: 1 MPITEKQKRWLKPQVHHLKPVVLVGQYGITEPVLAEIEIALDHHELIKVRINAGDRDERD 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK--ISLPR 97 + I TGA + IG LYR +++ I LP+ Sbjct: 61 AAIGLICERTGADLINRIGNVAALYRHNPKKRDPIVLPK 99 >UniRef50_C2CFN8 RNA binding protein n=5 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2CFN8_9FIRM Length = 94 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 54/93 (58%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ+ LK AH KP++ +G +T+ ++ I++AL+ ELIK+KI + + + I Sbjct: 2 LTGKQRAFLKQEAHDFKPIINIGKFSVTDDLIKAIDEALQARELIKIKILNNNMDDQDEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 ++ I+ +T + + +G LYR ++ K L Sbjct: 62 IDTIIDKTSSEFISHLGSIFTLYRKNEDNKYGL 94 >UniRef50_B1HUI3 UPF0044 protein n=9 Tax=Bacillales RepID=B1HUI3_LYSSC Length = 100 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK+ L+ AH L P+ +G G+ + + +I +ALE ELIKV+I E K + Sbjct: 2 LTGKQKRFLRAEAHHLSPIFQVGKGGVNDEMTKQIREALEVRELIKVRILDNCEEDKHEV 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISLPR 97 EA+ + A VQ+IG T+VLY+ ++ +KI LP+ Sbjct: 62 AEALAKGAHAELVQLIGLTVVLYKESRNQKKIVLPK 97 >UniRef50_B6BX40 CRS1 / YhbY domain superfamily n=2 Tax=Nitrosococcus oceani RepID=B6BX40_9GAMM Length = 96 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 42/96 (43%), Positives = 69/96 (71%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ Q ++L+ LAH LKPVV++G +G+T+ VL EI +LEHHELIK+K+ +RE ++ Sbjct: 1 MPLTKNQTRYLRTLAHSLKPVVIVGQSGITKAVLDEIAGSLEHHELIKIKMHDAEREERS 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 +++ +++ T A VQVIG+ + YR ++ +I+LP Sbjct: 61 AMIKHVLQVTQAELVQVIGRIGIFYRRGEKARITLP 96 >UniRef50_B1KZR2 CRS1/YhbY domain protein n=24 Tax=Bacteria RepID=B1KZR2_CLOBM Length = 97 Score = 115 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++TKQ+ +L+ LA+ + + +G +GL + +L +I+ ALE ELIK+ + T Sbjct: 2 ITTKQRSYLRSLANKMDAIFQIGKDGLNDNLLKQIDDALEARELIKISVLKNSFYTAKEA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPT-KERKISLPR 97 I E +Q IG +VLYR + K+ KI LP+ Sbjct: 62 SSEICEELNCEGIQCIGSKVVLYRKSRKKPKIELPQ 97 >UniRef50_B1ZUH5 Putative uncharacterized protein n=2 Tax=Opitutaceae RepID=B1ZUH5_OPITP Length = 102 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 3/99 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 L+ Q+ L+GL L+P + +G GLT +E+++ L HEL+K++ +R+ + Sbjct: 4 FPLTGAQRTFLRGLGQRLEPALKVGKGGLTPAFYSELQKQLRAHELVKLRFLGVERDERA 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER---KISLP 96 + + I + V +G T + YR E I+LP Sbjct: 64 SLCDEIADQGRCVCVGSVGHTALFYRQNPEPAERSIALP 102 >UniRef50_Q0A767 Putative uncharacterized protein n=2 Tax=Ectothiorhodospiraceae RepID=Q0A767_ALHEH Length = 100 Score = 115 bits (289), Expect = 5e-25, Method: Composition-based stats. Identities = 49/92 (53%), Positives = 61/92 (66%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ Q++HL+ LAH LKPVV G+ GLTE V+AEIE ALE HELIKVK+ +R + Sbjct: 1 MRLNESQRRHLRRLAHDLKPVVRTGNAGLTEAVMAEIELALESHELIKVKLVGLERADRQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 +E I ETGA VQ +G+ VLYR RK Sbjct: 61 PTIEQICVETGAELVQKVGQVAVLYRANPRRK 92 >UniRef50_D1YMG0 RNA-binding protein, YhbY family n=3 Tax=Veillonella RepID=D1YMG0_9FIRM Length = 94 Score = 115 bits (289), Expect = 5e-25, Method: Composition-based stats. Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ KQK++L+ LA + PVV +G NGL + V+ A+ ELIKVK+ E I Sbjct: 1 MTGKQKRYLRSLAATIPPVVQIGKNGLEDSVIDSARAAITARELIKVKLHNNSPED-KTI 59 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + + GA VQVIG VLY+ KE KI LP+ Sbjct: 60 FQDLADMLGAELVQVIGFNGVLYKAKKEPKIILPK 94 >UniRef50_C6MBV6 Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MBV6_9PROT Length = 117 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 34/91 (37%), Positives = 55/91 (60%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ ++ LK AH L PVV++G +GL+ V+ E+++ L HELIK+++ +DR + Sbjct: 2 LTLTIAHRRALKAQAHALNPVVMIGKSGLSPSVIEELDRGLSSHELIKIRVLIDDRIVRN 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + E I + A VQ IGK ++YRP E Sbjct: 62 ELFEKICQLLNAAPVQHIGKVFIIYRPRPEE 92 >UniRef50_C4Z0A1 Putative RNA-binding protein containing KH domain n=20 Tax=Bacteria RepID=C4Z0A1_EUBE2 Length = 107 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 +++KQ+ +LKGLA + P+ G N LT A I +ALE ELIK+ + + I Sbjct: 13 MTSKQRAYLKGLAMTMDPIFQFGKNSLTPENTAAIAEALEARELIKISVLNNCADDPREI 72 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISLP 96 + + T + VQVIGK +VLY+ +K+ +KI LP Sbjct: 73 AQMVAERTRSQVVQVIGKKIVLYKESKDNKKIILP 107 >UniRef50_B7C8W0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8W0_9FIRM Length = 96 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 50/95 (52%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+++ K++L+ L K + +G +GL++ ++ + +LE HEL+K + Sbjct: 2 LTSQNKKYLRKLGMDYKSLFQIGKDGLSDNLMDTLSDSLEAHELVKCNLLKTCPVDVREA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 TG+ V ++G T +LYR +KE K+ L + Sbjct: 62 AIECASATGSEVVHIVGHTFLLYRRSKENKLGLKK 96 >UniRef50_Q82WX8 Uncharacterized protein family UPF0044 n=2 Tax=Nitrosomonas RepID=Q82WX8_NITEU Length = 126 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 36/93 (38%), Positives = 57/93 (61%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L Q++ L AH L P V +G +GLTE V+ E++++L HELIKVK+ DR+ + Sbjct: 2 LELDMAQRRQLAASAHHLNPTVTIGKDGLTENVIGELDRSLLKHELIKVKVLDGDRDQRA 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKI 93 ++E I A V+ IG+ L++YR ++KI Sbjct: 62 SLLEQICLSLNAAPVEQIGRVLIIYRINPDKKI 94 >UniRef50_C8NFJ8 RNA-binding protein YhbY n=2 Tax=Granulicatella RepID=C8NFJ8_9LACT Length = 108 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 52/92 (56%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L K++Q K AH LKP+ +G GL+E ++ +I+ A+E ELIKV + E Sbjct: 1 MELKGKERQFFKKEAHSLKPIFQIGKGGLSEEMIHQIQNAVEKRELIKVTLLQNTLEEPQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 E I TG+ +QVIG T+VLY+ + K Sbjct: 61 EAAETIAEATGSTIIQVIGHTIVLYKEARNPK 92 >UniRef50_Q31HG7 Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HG7_THICR Length = 101 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 43/96 (44%), Positives = 73/96 (76%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 LS Q + LKG+AH L P++++G+NG+TE ++ E+E+ LEHHEL+K+K+A+ +R + Sbjct: 6 KLSKNQIKFLKGIAHGLNPIIIIGANGVTESLMEELEKTLEHHELLKIKMASAERSDRKE 65 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 I++ I++ TGA VQ IGKT+V++R ++E ++ LP+ Sbjct: 66 IIDYILQNTGAQLVQSIGKTVVIFRQSEESELQLPK 101 >UniRef50_UPI0000E87C63 hypothetical protein MB2181_02825 n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87C63 Length = 96 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 39/95 (41%), Positives = 63/95 (66%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++KQ +LK L+HP+ PVV +G GLT+ V+ EI+ L HELIK+K+ ++ +E + + Sbjct: 2 LNSKQTAYLKALSHPINPVVQIGLKGLTDSVIKEIDVNLNAHELIKIKVQSDSKENREGL 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER-KISLP 96 +I + A + IGK LV++RP ++ KI+LP Sbjct: 62 WISICEKVRAEPINHIGKLLVIFRPNPKKTKITLP 96 >UniRef50_Q2S2W7 CRS1 / YhbY domain superfamily n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2W7_SALRD Length = 107 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+++Q+ HL+ AH P+V +G G+T+ V+ +E+A EL+ +++ Sbjct: 4 RLTSRQRAHLRSEAHGQDPLVHIGKEGVTDPVMQAVEEAFNTRELVTIRVLDNAPRPVRE 63 Query: 62 IVEAIVRET-GACNVQVIGKTLVLYRPTK-ERKISLP 96 + EA+ V+ IG T + YRP + +I LP Sbjct: 64 VAEAVADALEDVQVVRTIGGTALFYRPHPDDPEIDLP 100 >UniRef50_A6T082 Uncharacterized conserved protein n=4 Tax=Betaproteobacteria RepID=A6T082_JANMA Length = 156 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 40/90 (44%), Positives = 57/90 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ ++ L+ AH L PVV++G GLT GVL EI+ +L H LIKV++ +DRE + Sbjct: 2 LKLTPAERSSLRAEAHALSPVVIIGEAGLTPGVLKEIDGSLNSHGLIKVRVFGDDREARV 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 I + I + A +Q IGK LV+YRP KE Sbjct: 62 TIYDTICEKLDAAPIQHIGKLLVVYRPKKE 91 >UniRef50_Q47HI3 Putative uncharacterized protein n=7 Tax=Betaproteobacteria RepID=Q47HI3_DECAR Length = 120 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 39/92 (42%), Positives = 54/92 (58%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + LS+ Q+ L+ AH L PVV + NGLTE VL EI+ L H+LIK+++ + RE + Sbjct: 2 LQLSSAQRSELRAQAHNLNPVVSIAENGLTEAVLKEIDLNLRAHQLIKIRVYGDSRENRI 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 E I + A VQ IGK LV++RP K Sbjct: 62 AFYEQICAQLDAAPVQHIGKLLVVFRPAPIEK 93 >UniRef50_Q607B1 Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus RepID=Q607B1_METCA Length = 96 Score = 111 bits (278), Expect = 9e-24, Method: Composition-based stats. Identities = 41/90 (45%), Positives = 59/90 (65%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 ++ + ++ L+ AH LKPVV+ G G+T GVL EI+ ALEHHELIKV++ DRET+ Sbjct: 3 RMTPELRRQLRAKAHKLKPVVITGQAGITPGVLGEIDMALEHHELIKVRVNAGDRETRAE 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + I E+GA VQ +G + L+R + ER Sbjct: 63 MTAQICGESGAELVQSLGHVITLFRKSPER 92 >UniRef50_A6EYL2 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=11 Tax=Gammaproteobacteria RepID=A6EYL2_9ALTE Length = 103 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 45/95 (47%), Positives = 66/95 (69%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M+LS +Q++ +G+AH LKPV+++G GLTEG+ E+E+AL HELIK+K+A++DRET+ Sbjct: 1 MSLSPEQRREYRGIAHNLKPVIIVGDKGLTEGLQEELERALNDHELIKIKVASQDRETRQ 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 V A+ +GA VQ IGK V+ R K+ L Sbjct: 61 EAVAALCEASGAELVQTIGKIAVILRRAKKPNPKL 95 >UniRef50_A9HYV3 Putative uncharacterized protein n=5 Tax=Bordetella RepID=A9HYV3_BORPD Length = 203 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 36/89 (40%), Positives = 57/89 (64%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+++++ L+ AHPL+PVVL+G NGLT+ VL EI++AL H LIKV+ DR+ + Sbjct: 4 LELTSRERSDLRSAAHPLRPVVLIGDNGLTDAVLKEIDRALASHGLIKVRAGGSDRDERE 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK 89 ++ +I V +GK L+L+RP Sbjct: 64 AMLASICDALSCAPVHHLGKMLILFRPLP 92 >UniRef50_D2MM12 RNA-binding protein, YhbY family n=1 Tax=Bulleidia extructa W1219 RepID=D2MM12_9FIRM Length = 97 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 49/97 (50%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQK +L+ LA K G +GL++ + I+ A ELIK+ + Sbjct: 1 MILTPKQKAYLRSLAQTEKAKFQCGKDGLSDTFIELIQNAFHTRELIKIHVLKGLEVDVK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR 97 + I T + VQ+IG+ +VLY+ K +I LPR Sbjct: 61 ELALEIAHYTKSEVVQIIGRQVVLYKAMKTPRIVLPR 97 >UniRef50_P95453 Probable RNA-binding protein PA4753 n=18 Tax=Gammaproteobacteria RepID=Y4753_PSEAE Length = 104 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 39/91 (42%), Positives = 62/91 (68%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ +QK+ K + H LKPV+++ NGLTEGVLAE+E+AL HELIKVK+A +R+ + Sbjct: 1 MALTQEQKKQFKSIGHHLKPVLIVAENGLTEGVLAELERALNDHELIKVKLALAERDDRR 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 +++ + ++ + VQ IGK ++YR + Sbjct: 61 ALLDELCAQSRSDLVQSIGKMALVYRKNPKP 91 >UniRef50_B2V0A9 CRS1/YhbY domain protein n=22 Tax=Firmicutes RepID=B2V0A9_CLOBA Length = 98 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ+ +L+GL + P+ +G NG+ E L ++ QALE ELIK+K+ Sbjct: 2 LTGKQRAYLRGLGSNMAPIFQVGKNGIEENFLTQVAQALEKRELIKIKVLENSGLDTRET 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTK-ERKISLP 96 + I + VQ IG +VLY+ +K + KI +P Sbjct: 62 SDLICKSLKCEGVQAIGNKMVLYKKSKNKPKIEIP 96 >UniRef50_C9YA67 RNA-binding protein HI1333 n=10 Tax=Betaproteobacteria RepID=C9YA67_9BURK Length = 157 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 56/92 (60%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ Q++ + AH L PVVL+G +GLT V EI+ AL H LIKV++ ++DR + Sbjct: 4 IQLTPAQRKEHRAEAHHLDPVVLVGGDGLTANVKKEIDAALNAHGLIKVRVFSDDRTARD 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 + + + E A +Q IGK LVL+RP ++ Sbjct: 64 EMFKTLAEELNAAPIQHIGKLLVLWRPKPAKE 95 >UniRef50_D1D4Q5 RNA-binding protein n=21 Tax=Neisseria RepID=D1D4Q5_NEIGO Length = 94 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 38/89 (42%), Positives = 52/89 (58%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+TK+ LK AH L PVV++G GLT+ V+ E + AL HELIKV++ +DR + Sbjct: 5 KLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAALTAHELIKVRVFGDDRAERIE 64 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKE 90 I + A V+ IGK LVL+R E Sbjct: 65 ICNTLCEAVDAQPVRHIGKLLVLWRKNIE 93 >UniRef50_D1VUN4 RNA-binding protein YhbY n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUN4_9FIRM Length = 97 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 56/90 (62%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L K + +LK LA+ L P+V +G GL+E + +++++LE HEL+K+K+ I Sbjct: 2 LRGKDRSYLKSLANNLDPLVQIGKFGLSESLFDQLDKSLEDHELVKIKVLKNSPVEAKEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK 92 V+ I+ +TGA VQ IG L +YR +KE K Sbjct: 62 VQEILEKTGAEFVQQIGSKLTIYRQSKENK 91 >UniRef50_B1XUM7 Putative uncharacterized protein n=2 Tax=Polynucleobacter necessarius RepID=B1XUM7_POLNS Length = 208 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 35/88 (39%), Positives = 56/88 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + ++ Q++ LK AH L PVV++G +GLT V+ E + A+ HH LIK+++ +DRE + Sbjct: 4 LTITPAQRKSLKADAHDLSPVVMVGGDGLTPAVIKEAKLAINHHGLIKIRVFGDDRELRI 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPT 88 + E + + A VQ IGK LVL++P Sbjct: 64 AMYEELCDKLDAAPVQHIGKLLVLWKPK 91 >UniRef50_D1KBJ6 RNA-binding protein n=3 Tax=Gammaproteobacteria RepID=D1KBJ6_9GAMM Length = 100 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 42/98 (42%), Positives = 68/98 (69%), Gaps = 1/98 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ QK+ L+ H LKPVV++G +GL+E VLAE+E ++ HEL+K+KI TED++ K Sbjct: 2 IKLTNNQKKFLRSKGHALKPVVMVGQHGLSESVLAELESSMNKHELLKIKIRTEDKDEKQ 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP-TKERKISLPR 97 +++ I+ + + VQVIG +V+YR ++ +I LPR Sbjct: 62 KMIDKIIEFSQSHLVQVIGNVMVIYRAFDEDPQIILPR 99 >UniRef50_A0LDZ2 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=A0LDZ2_MAGSM Length = 106 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 41/100 (41%), Positives = 64/100 (64%), Gaps = 4/100 (4%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M+L+ Q+ +LKGLAHPLKPVV +G G+ + VLA +E+AL HELIKV+ + +E + Sbjct: 1 MSLAGFQRTYLKGLAHPLKPVVFVGKEGVKDSVLAAVEEALLIHELIKVRFL-DFKEQRK 59 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER---KISLPR 97 + +A+ ++ + V +IG +LYR E +I LP+ Sbjct: 60 DLAKALATDSQSELVGMIGHLAILYRAHPEPEHRRIQLPK 99 >UniRef50_C8PXU7 23S rRNA methyltransferase J n=4 Tax=Moraxellaceae RepID=C8PXU7_9GAMM Length = 105 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 37/94 (39%), Positives = 52/94 (55%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +LS +HLKG+ H L PVV++G G+T V+ EI +AL HELIKVKI + + Sbjct: 5 SLSNADIKHLKGIGHQLNPVVMIGGQGVTPTVIEEIGRALTDHELIKVKIPAGSKADRDA 64 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 + AI T A V IG+ ++L R + L Sbjct: 65 VANAIAEATDATLVTSIGRMVLLLRRNLDANPKL 98 >UniRef50_C0PR74 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=C0PR74_PICSI Length = 249 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 L+ K+K+ L AH L + +G +G+T V I ALE +ELIK+K+ + Sbjct: 128 ELTVKEKKELSAYAHSLGKKLKCHQVGKSGVTSSVEVSISDALEANELIKLKVHNTCPDE 187 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + + T + V IG+T +LYRP+ + Sbjct: 188 LDAVASRLQETTRSVVVGQIGRTFILYRPSPRK 220 >UniRef50_B9MRC0 Putative uncharacterized protein n=2 Tax=Clostridia RepID=B9MRC0_ANATD Length = 95 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 1/94 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++KQ+ L+G+A+ + ++ +G G+TEGVL +I++AL ELIK+ + Sbjct: 2 LTSKQRAKLRGMANTMDAIIRIGKEGITEGVLKQIDEALTARELIKIALEKNCEIEPKEA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISL 95 + I + A VQVIG+ +V+YR ++E +I + Sbjct: 62 IAYICEKLNAEPVQVIGRKIVIYRMSEENPRIQI 95 >UniRef50_A5EXB7 YhbY family protein n=2 Tax=Cardiobacteriaceae RepID=A5EXB7_DICNV Length = 98 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ Q + LK AH L PV+L+G+ G T+ V EI AL+ HELIK+K+ + + Sbjct: 2 LNKTQIRFLKSTAHHLHPVILIGNQGTTQAVQREINTALDAHELIKIKLPPVTNNDQLTM 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTK-ERKISLPR 97 ++ I+ A VQ IG ++YR + KI+LPR Sbjct: 62 IDEIITAQHAEFVQKIGHIAIIYRHNPQQPKITLPR 97 >UniRef50_B8DU23 Putative uncharacterized protein n=5 Tax=Actinobacteria (class) RepID=B8DU23_BIFA0 Length = 101 Score = 108 bits (271), Expect = 6e-23, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 50/94 (53%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQ + L+ +A+ LKP+V +G L++ V+ + ++ +E ELIKV++ Sbjct: 1 MALTKKQVRQLRAMANQLKPLVQIGKGDLSDNVIKQADETIEKRELIKVQVLDGSGIDAK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKIS 94 + + GA VQVIG VLYR + I Sbjct: 61 EAAQGLADRMGAEVVQVIGNRAVLYRRSHRDDIE 94 >UniRef50_C9XNP1 Putative uncharacterized protein n=7 Tax=Clostridiaceae RepID=C9XNP1_CLODC Length = 122 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L KQ+ +L+ LA+ LKP +G G+TE L +++ L EL+KV I Sbjct: 2 LKGKQRAYLRSLANTLKPTTQIGKEGVTESFLEQLDGMLRTRELVKVTILENAGLDTKET 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPT-KERKISLP 96 A+ A VQ IG +Y+ +E KI P Sbjct: 62 ANAVCEALRAEFVQAIGFKFTIYKRNIEEPKILFP 96 >UniRef50_C3W9Y6 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3W9Y6_FUSMR Length = 101 Score = 108 bits (270), Expect = 8e-23, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 56/94 (59%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L++K++ +L+ AH L +V +G G+T+ ++ I A+E ELIKVKI E K Sbjct: 1 MELTSKRRAYLRKKAHDLDALVRIGKEGVTDNLIQSILDAIESRELIKVKILQNCEEEKM 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKIS 94 I+E + + V +IG+T++L++ K++ + Sbjct: 61 EIMEQLSQCKEFEVVGIIGRTIILFKENKDKPVI 94 >UniRef50_Q1DDA8 Putative uncharacterized protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DDA8_MYXXD Length = 96 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 1/90 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQ++HL+ L H L+PVV++G G+TEGV+A IEQAL+ HELIKVKI ET+ Sbjct: 1 MPLTGKQRRHLRALGHHLEPVVIVGQAGVTEGVIAAIEQALQDHELIKVKINEG-PETRQ 59 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 I A Q++G+T ++++ K+ Sbjct: 60 EAAARIAEGAQAELAQLLGRTALVFKKRKK 89 >UniRef50_C4KVI2 CRS1 n=80 Tax=Betaproteobacteria RepID=C4KVI2_BURPS Length = 184 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 37/87 (42%), Positives = 58/87 (66%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 ++LS ++ L+ AH LKPVVL+G+ GLT+ VLAEIE L H+LIK+++ ++R+ + Sbjct: 4 LSLSPAERSALRSEAHALKPVVLIGAEGLTDAVLAEIEVHLAAHQLIKIRVFGDERDERV 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 I + I A +Q IGK LV+++P Sbjct: 64 AIYDEICDRLNAAPIQHIGKLLVIWKP 90 >UniRef50_Q0EZJ5 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZJ5_9PROT Length = 92 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 40/87 (45%), Positives = 55/87 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LS+K+++ LK AH LKPV+ +G G+TE ++ E EQAL+ HELIKV IA E+ Sbjct: 1 MALSSKERKELKARAHHLKPVIRIGQKGITENLVLETEQALDTHELIKVHIAGENGSECK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 + R++ A V IGKT +LYR Sbjct: 61 ASGLELARQSHAEVVDHIGKTTILYRK 87 >UniRef50_Q5P1G1 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=3 Tax=Rhodocyclaceae RepID=Q5P1G1_AZOSE Length = 156 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 56/90 (62%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ +++ L+ AH L PVV + NGLT VL EI+++L+ HELIK+K+ +R + Sbjct: 3 ELTPARRRELRAGAHHLNPVVSIAGNGLTPAVLGEIDRSLQAHELIKIKVHGAERAARDA 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKER 91 +++A+ GA +Q IG LV++R +E Sbjct: 63 LMKAVCDALGASPIQHIGTILVIWRERREE 92 >UniRef50_C9LL05 RNA-binding protein YhbY n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL05_9FIRM Length = 96 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 1/95 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQKQ+LK A VV +G G+T+ V+ + +AL ELIKVKI E Sbjct: 2 LTGKQKQYLKSTAVDFSAVVQIGKEGITDNVINSVTEALAARELIKVKINQNSAENIRKA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER-KISLP 96 + + E+G VQ+IG+ +L++ ++ LP Sbjct: 62 AKLLSEESGCEIVQIIGRNCILFKQKDKKSHYDLP 96 >UniRef50_B4X4Q0 CRS1 / YhbY domain superfamily n=2 Tax=Alcanivorax RepID=B4X4Q0_9GAMM Length = 104 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 57/95 (60%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LST+ + L+ + H LKPV++ G GL++ + E+ LE HELIKVK+ E R+ + Sbjct: 1 MPLSTQDIKRLRRIGHHLKPVLIFGDKGLSDNFVEELNLRLEDHELIKVKVNAETRDDRA 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 IV+A+ + A +Q IG +LYRP ++ L Sbjct: 61 AIVQALTEKGSAELIQRIGNIALLYRPAQKPSAKL 95 >UniRef50_C7RKS5 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKS5_9PROT Length = 119 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 54/93 (58%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + LS+ +++ L+ AH L PVV + GL+E V+ EI +L HELIKV++ DR+ + Sbjct: 2 LTLSSTERRSLRARAHSLHPVVAISDKGLSESVVREINASLISHELIKVRVHNADRQVRE 61 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKI 93 + + A VQ IGK LVL+RP ++ Sbjct: 62 AFLNMLCERLQAAPVQHIGKLLVLWRPQPAEQV 94 >UniRef50_B5ENR6 Putative uncharacterized protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENR6_ACIF5 Length = 94 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 36/87 (41%), Positives = 58/87 (66%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L K +Q L+G AH LKPVV++G++G+T+GVLAE+E A+ HEL+KV++ + + + Sbjct: 2 LDAKHRQALRGQAHALKPVVIIGAHGITDGVLAELEVAIHAHELVKVRLPQVSHDERDAM 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTK 89 ++ + + A V IG+ L+LYRP Sbjct: 62 IKTLSTASHADVVGHIGRVLILYRPRP 88 >UniRef50_Q03J88 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=75 Tax=Lactobacillales RepID=Q03J88_STRTD Length = 105 Score = 105 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 33/92 (35%), Positives = 53/92 (57%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M+L++KQ+ LK AH LKP+V +G NGL + + + AL+ ELIKV + E Sbjct: 1 MSLTSKQRAFLKSEAHTLKPIVQIGKNGLNDHIKTSVRNALDARELIKVTLLQNTMEDIH 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 + E + E G V IG+ L+LY+ + +++ Sbjct: 61 EVAEILEEEIGCDTVLKIGRILILYKESAKKE 92 >UniRef50_C2HJU9 RNA binding protein n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJU9_PEPMA Length = 96 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 55/93 (59%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ KQ+ LK ++H KP+V +G G++E L +I+ L E++K+KI + + + ++ Sbjct: 2 ITPKQRAKLKKISHGYKPLVNIGKGGISENTLKQIDDTLNKREVMKIKILNNNLDDRDML 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 ++ I+ + V+ +G L +YR ++ + I L Sbjct: 62 IDEILTKLDCEFVRYMGNILTIYRESENKVIDL 94 >UniRef50_A0Z550 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=4 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z550_9GAMM Length = 111 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 38/89 (42%), Positives = 55/89 (61%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +LS + + +AH L PVV +G NGL+ VLAE+++AL HELIK+KIA DR+ + Sbjct: 11 SLSNTVLRQYRAIAHKLNPVVRVGGNGLSTNVLAEVDRALGDHELIKIKIAVGDRDLRDA 70 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKE 90 ++E + + T A VQ IG T L R + Sbjct: 71 LIEQLCQTTHAQLVQRIGNTATLLRRNPQ 99 >UniRef50_A9S9R6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S9R6_PHYPA Length = 274 Score = 105 bits (262), Expect = 7e-22, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 L K+K+ L+ AH L + +G GLT + I ALE +ELIK+++ E Sbjct: 143 QLGNKEKKELRAYAHQLGNDICIHQVGKWGLTANCITAISDALEANELIKIRVLDNLDEE 202 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 + +TGA V +G+TL+LYRP+ Sbjct: 203 LADTASKLESKTGAQIVGKMGRTLLLYRPS 232 >UniRef50_Q03GA6 RNA-binding protein, KH domain n=26 Tax=Lactobacillales RepID=Q03GA6_PEDPA Length = 103 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 51/90 (56%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L KQK++L+ AH +PV +G NGLTE L ++ AL++HEL+K+ I T Sbjct: 1 MELRGKQKRYLRARAHSYRPVFSVGKNGLTEAWLNQLAGALDNHELLKINIQQNSDATTA 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE 90 E I T VQ IG+ LVL++ + E Sbjct: 61 EAKEFIESNTDIQVVQTIGRVLVLFKVSSE 90 >UniRef50_D2RB57 RNA-binding protein, YhbY family n=17 Tax=Actinobacteria (class) RepID=D2RB57_GARVA Length = 101 Score = 104 bits (261), Expect = 9e-22, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 52/89 (58%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ KQ + L+ LA+ L P++ +G N +T+ + + ++ +++HEL+K + + Sbjct: 1 MALTKKQIKQLRALANTLSPLLYVGKNDITDAAVKQADETMQYHELMKCSVQDGSGLSAK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK 89 +A+ ++ GA VQVIG VL+R + Sbjct: 61 EAADALAQKLGAEVVQVIGNRFVLFRVSP 89 >UniRef50_A0Q5D2 RNA-binding protein n=21 Tax=Gammaproteobacteria RepID=A0Q5D2_FRATN Length = 92 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 43/90 (47%), Positives = 56/90 (62%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 + KQ+Q LK AH LKPVVL+G GLTE V+ EI+ AL H+LIKVK+ +E K I Sbjct: 1 MDVKQQQKLKAQAHSLKPVVLMGEKGLTENVILEIDLALASHQLIKVKVGRLPKEEKQQI 60 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERK 92 I + T + VQ+IG LVLYR ++ Sbjct: 61 ASEITQATSSELVQIIGNILVLYRRNPNKE 90 >UniRef50_B2HXD4 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=20 Tax=Gammaproteobacteria RepID=B2HXD4_ACIBC Length = 107 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 42/89 (47%), Positives = 60/89 (67%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 LS +++ L+ + H L PVV++G GLT+ V+ E +AL HELIKVKIA EDRE + Sbjct: 3 ALSIHERKRLRQIGHVLNPVVMIGGQGLTDAVIEETLRALNDHELIKVKIAGEDREARAA 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKE 90 +++AIV TGA VQ IGK ++LY+ + Sbjct: 63 VIDAIVEATGAEAVQKIGKIVLLYKKAAK 91 >UniRef50_Q1MZR4 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=Q1MZR4_9GAMM Length = 101 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 41/93 (44%), Positives = 59/93 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L+ ++K+ LK + H L PVV + NGL+E V+ EI++ALE HELIKVK A DR+ K Sbjct: 1 MQLTQERKKALKAIGHKLNPVVTVAGNGLSESVILEIDRALEDHELIKVKFAVGDRDLKK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERKI 93 ++ + T + VQ IG + YRP KE ++ Sbjct: 61 DLLVETEKVTRSTLVQSIGNIGLFYRPAKEPQL 93 >UniRef50_D1PPV8 Transcription-repair coupling factor n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPV8_9FIRM Length = 99 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 43/89 (48%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++KQ+ L+G A+ L PV +G + E ++ + L ELIKVK+ + Sbjct: 2 LNSKQRAALRGAANTLDPVFQIGKGEIDETLIQGVGDCLAARELIKVKVLENSEYSAREA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER 91 + A VQVIG+ VL++ + Sbjct: 62 ANILAEALSADCVQVIGRKFVLFKQKPKE 90 >UniRef50_C4FU95 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU95_9FIRM Length = 117 Score = 103 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 37/93 (39%), Positives = 49/93 (52%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +L+ KQ HLK +AH KP+ +G GL + L +++QAL ELIK K+ E Sbjct: 15 SLNKKQVNHLKKIAHHEKPIFQMGKEGLGQSFLDQVDQALTKRELIKFKVLQNSEEEIRE 74 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKERKIS 94 + I A VQVIG T VLYRP+ K Sbjct: 75 VTAEIAYALDAHVVQVIGHTGVLYRPSHIAKYQ 107 >UniRef50_B4D0Q3 Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Q3_9BACT Length = 92 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ +K+ LK A L+PVV LG G+++ + +++AL H L+K+K A + +E K Sbjct: 4 TLTNAEKRDLKAQAQRLEPVVKLGHGGMSDAFIHSLDEALNQHGLVKMKFA-DFKEEKKT 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + I TG+ V +G V YRP E Sbjct: 63 LAPQIAERTGSAIVMQVGNVAVFYRPKPEE 92 >UniRef50_C1AC38 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC38_GEMAT Length = 99 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 40/88 (45%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ K + L+ AH L V +G GLT ++ + L H L+KV++A + Sbjct: 1 MTGKTRAALRAEAHHLDVHVHIGHAGLTPSLMQSFDDVLRTHMLVKVQVAKGGELSAKDA 60 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE 90 A +QVIG+T +YR E Sbjct: 61 ANQSAEALKAEVIQVIGRTFAVYRENPE 88 >UniRef50_UPI0001A7B00B RNA binding n=1 Tax=Arabidopsis thaliana RepID=UPI0001A7B00B Length = 222 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 3/94 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVL---LGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE 57 + LS K+K+ L AH L + +G +G+T+ V+ + LE +EL+KVKI Sbjct: 117 LELSAKEKRKLASYAHHLGDKLKSQLVGKSGVTDSVVLSFVETLEKNELLKVKIHRTCPG 176 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 ++ + TG+ +V I +T++LYRP+ + Sbjct: 177 ELEDMILRLEEATGSVSVGQIARTVILYRPSPTK 210 >UniRef50_A9B571 Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B571_HERA2 Length = 100 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 4/100 (4%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L++ Q+Q+L+ LAH LKPVV +G GL+ V+A + AL+ HELIKVK E +E + Sbjct: 2 LTLNSNQRQYLRRLAHDLKPVVQIGKQGLSSTVVAAVAAALDAHELIKVKF-GEFKEERR 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK---ERKISLPR 97 + + +V +T A V ++G +LYRP++ ++ I LPR Sbjct: 61 ELTDQLVADTEATLVALVGNVAILYRPSRLDDKQVIVLPR 100 >UniRef50_C5BQ04 RNA-binding protein, translation initiation factor n=3 Tax=Gammaproteobacteria RepID=C5BQ04_TERTT Length = 99 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 55/91 (60%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LS + + + L H L P+V + + G+T+ VLAEI +ALE HELIK+K+A DR+ + Sbjct: 1 MALSADKMKQYRTLGHSLNPIVTIAAKGVTDNVLAEINRALEDHELIKIKVAVVDRDARK 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 ++ + + A VQ IGK +L+R + Sbjct: 61 AAIQEVCTSSNAQLVQEIGKVALLFREAAKP 91 >UniRef50_Q4JMW4 Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC13K9BAC RepID=Q4JMW4_9BACT Length = 97 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 34/89 (38%), Positives = 55/89 (61%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +S+ +++ LK A+ +KP+V++G NGLT+ V+ EI+ AL+ HELIKV+ D++ +T Sbjct: 4 RISSNKRKELKKKAYTMKPIVMIGQNGLTDAVINEIDVALKTHELIKVRAKGSDKDERTK 63 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKE 90 I + A + IG VLYRP + Sbjct: 64 QCMKIKEKLNADIIHRIGFITVLYRPAPD 92 >UniRef50_A8ZX30 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8ZX30_DESOH Length = 101 Score = 101 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 4/99 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT-EDRETKT 60 L Q+++L+ LAH LKPVV +G G+T+ V+ I++AL+ HELIK+K+ ++++ K Sbjct: 3 QLKGFQRKYLRELAHSLKPVVSIGQKGITDAVIRTIDEALDTHELIKLKLLAFKEKDQKK 62 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPT---KERKISLP 96 I+E I E IG T +L+R ++RKI+LP Sbjct: 63 EIIERIEVENKCEVAGTIGHTAILFRQHQDPEKRKITLP 101 >UniRef50_A6GAH3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAH3_9DELT Length = 104 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 6/101 (5%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT-EDRETKT 60 LS KQ++ L G+AH L PVV +G+ GLTE V A + +AL HELIKVK+ + + Sbjct: 4 ELSPKQRKFLSGMAHSLSPVVQVGAAGLTESVFAAVSEALRRHELIKVKLPKVDSAAERH 63 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPT-----KERKISLP 96 + + ++ + A V ++G+ V+Y+P + +I LP Sbjct: 64 ALYDTLIEGSEALRVALLGRVAVIYKPRGKDLPDKPRIQLP 104 >UniRef50_C9N0K7 RNA-binding protein YhbY n=4 Tax=Bacteria RepID=C9N0K7_9FUSO Length = 115 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET-K 59 + LS+K++ LK LAH L P+V +G +G+ E VL I + ++ ELIKVKI Sbjct: 2 IQLSSKERAFLKKLAHNLDPIVRIGKDGIDENVLKSISEVVKKRELIKVKILQNSSVEFD 61 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPT--KERKIS 94 + I ++T + V IG L+ ++P K+ KI+ Sbjct: 62 REMATEIAQKTKSVFVDKIGSVLIFFKPKTTKDAKIT 98 >UniRef50_A9WDQ0 Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WDQ0_CHLAA Length = 95 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 + Q+ +L+ LAHPL V++G NGLTEG+LA+IEQ L HELIKV+ + ++ K + Sbjct: 1 MKPAQRAYLRRLAHPLPVTVMIGKNGLTEGILAKIEQELNAHELIKVRFL-DHKDMKQSL 59 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER 91 E IV ETGA V +IG T +L+R + Sbjct: 60 TETIVSETGADLVAIIGHTAILFRQHADP 88 >UniRef50_C5V7C4 Putative uncharacterized protein n=2 Tax=Gallionellaceae RepID=C5V7C4_9PROT Length = 116 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 2/96 (2%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L+ ++ LKG AH LKP V++G+ GLTE VL EI +L+ HELIK+++ +R + Sbjct: 2 LELTVTERLTLKGRAHQLKPTVMIGNAGLTESVLKEISVSLKQHELIKIRVM-AERADRE 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKE-RKISL 95 ++ I + A VQ IGK LV+Y P + KI + Sbjct: 61 TMLTEICTQLNAAPVQHIGKILVIYLPKPDAEKIEI 96 >UniRef50_Q8TUY0 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=1 Tax=Methanopyrus kandleri RepID=Q8TUY0_METKA Length = 105 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 2/90 (2%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE--DRETK 59 LS K+++ L+ A L PVV +G GLT GV+ E+++ LE LIKV+ R + Sbjct: 6 RLSGKERRALRARAVLLDPVVRIGKKGLTSGVIQEVDRQLEERGLIKVRFERNILRRYDR 65 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPTK 89 + E + R+ A + V G+T VL+RP + Sbjct: 66 KELAEELARKVNAELIDVRGRTAVLFRPRE 95 >UniRef50_C6TB79 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TB79_SOYBN Length = 260 Score = 99.7 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVVL---LGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 +LS K+++ L AH L + +G +G+T + + LE +EL+K+KI Sbjct: 120 SLSVKERKELASYAHSLGDKLKTQLVGKSGVTPNLATSFIETLEANELLKIKIHRTCPGE 179 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 +V+ + TG+ V IG+T ++YRP+ Sbjct: 180 LDDVVKQLEEATGSVAVGQIGRTFIIYRPS 209 >UniRef50_D1IXC2 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1IXC2_VITVI Length = 287 Score = 99.3 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVL---LGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE 57 +NL+ K+K+ L AH L + +G G+T V + + LE +EL+K+KI Sbjct: 143 VNLTIKEKKELASYAHSLGKKLKCQLVGKQGVTASVASAFIENLESNELLKIKIHGTCPG 202 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 +V+ + TG+ V IG++++LYRP+ Sbjct: 203 ELPDVVKQLEESTGSVVVGQIGRSVILYRPS 233 >UniRef50_B6T8H1 CRS1 / YhbY domain containing protein n=5 Tax=Poaceae RepID=B6T8H1_MAIZE Length = 259 Score = 98.9 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 LS K+++ L AH L + +G +G+T +++ LE +EL+K+KI Sbjct: 95 KLSVKERKELASYAHGLGKKLKSQQVGKSGVTPNLVSAFSDNLESNELLKLKIHGNCPGE 154 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 ++ + TG+ V IG++++LYRP+ Sbjct: 155 LPDVILQLEESTGSIAVDQIGRSVILYRPS 184 >UniRef50_C6JNB7 Putative uncharacterized protein n=5 Tax=Fusobacterium RepID=C6JNB7_FUSVA Length = 102 Score = 98.5 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 58/92 (63%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L++KQ+ LK AH L P+V +G +G+TE ++ I +A++ EL+KVKI + K Sbjct: 1 MALTSKQRAFLKKKAHELNPLVRIGKDGVTESLIQSILEAIDSRELLKVKILQNCEKEKE 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 ++E + + + V +IG+T++L+R +++ Sbjct: 61 EVLEELSKCSEFEIVGIIGRTIILFRENRDKP 92 >UniRef50_C6NUK8 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NUK8_9GAMM Length = 113 Score = 98.5 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 40/93 (43%), Positives = 62/93 (66%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS+K++Q LK AHPL+PV+L+GS GL ++ E+++ L HHELIKV++ +RE + + Sbjct: 2 LSSKERQALKARAHPLQPVLLVGSAGLGPALMEELDRVLLHHELIKVRLPAVERELRDAM 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 V I+ +GA + IG+ L+LYRP +L Sbjct: 62 VAEILATSGAEAIARIGRILILYRPRPPEPGTL 94 >UniRef50_C2KVY9 RNA binding protein n=1 Tax=Oribacterium sinus F0268 RepID=C2KVY9_9FIRM Length = 101 Score = 98.5 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 48/89 (53%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 +K + LKG A ++P + LG N +T + + + +E HEL+K+ + + + Sbjct: 7 DSKMRSALKGAAQKIEPTLSLGKNSITPEFIEAVREYMEKHELMKIHVLKNCIDDLRELG 66 Query: 64 EAIVRETGACNVQVIGKTLVLYRPTKERK 92 I +G VQ+IG+ +VLY+P KE K Sbjct: 67 NTIAERSGTELVQIIGRMIVLYKPAKEEK 95 >UniRef50_C0QM00 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QM00_DESAH Length = 102 Score = 97.7 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT-EDRETKT 60 L Q+++L+GLAH +KP +G GLT+ ++ EI +AL+ ELIKVK +++ KT Sbjct: 3 ELKGSQRKYLRGLAHDIKPSAFVGQKGLTDALVNEINEALDASELIKVKFVDYKEKTVKT 62 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTKERK---ISLP 96 + + I T + +IG + YR K + I +P Sbjct: 63 SLAQEIETSTASHLAGLIGHVAIYYREHKNPEKRVIRIP 101 >UniRef50_B6BWT9 CRS1 / YhbY domain superfamily n=1 Tax=beta proteobacterium KB13 RepID=B6BWT9_9PROT Length = 95 Score = 97.3 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 54/89 (60%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQ + LK AH LK V +GS G+T V++EI + HELIK++I ++ ++ + I Sbjct: 2 LNNKQIKALKAEAHHLKTTVSVGSKGITNQVISEIANTINFHELIKIQIQSDTKQDRLEI 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER 91 + I + T + VQ+IGK V+++ E Sbjct: 62 AKQICQATESEFVQLIGKQAVIFKQKNEE 90 >UniRef50_A5TU14 Possible RNA binding protein n=8 Tax=Fusobacterium RepID=A5TU14_FUSNP Length = 99 Score = 97.3 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 56/94 (59%), Gaps = 1/94 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 +++K++ LK AH L+P+V +G +GL + ++ I A+ ELIKVKI E KT+I Sbjct: 1 MNSKKRAFLKKKAHNLEPIVRIGKDGLNQNIVQSILDAIASRELIKVKILQNCEEEKTII 60 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE-RKISL 95 ++ V ++G+T+++++ KE ISL Sbjct: 61 YSKLMDIKDFEVVGMVGRTIIIFKENKENPSISL 94 >UniRef50_Q2IMK4 Putative uncharacterized protein n=5 Tax=Myxococcales RepID=Q2IMK4_ANADE Length = 187 Score = 96.6 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%) Query: 8 KQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIV 67 ++ L+ H L PVV +G +GLTE VL ++++AL HEL+K+K+ TE E + I + ++ Sbjct: 19 RRALRAAGHHLSPVVQVGKDGLTEAVLRQLDEALLAHELVKMKVGTESPEDRLEIADRLL 78 Query: 68 RETGACNVQVIGKTLVLYRPTKERK 92 E QV+G+T++ YR ER Sbjct: 79 AE-DVQVAQVLGRTVLAYRRHPERP 102 >UniRef50_Q9FW07 Os10g0512500 protein n=2 Tax=Oryza sativa RepID=Q9FW07_ORYSJ Length = 252 Score = 96.2 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 58 LS K+++ L AH L + +G G+T V+A LE +EL+K+KI Sbjct: 101 KLSVKERKELASYAHGLGKRLKSQQVGKGGVTPSVVAAFNDNLESNELLKLKIHLNCPGE 160 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 ++ + TG+ V IG++++LYRP+ Sbjct: 161 LPDVILQLEESTGSIAVDQIGRSVILYRPS 190 >UniRef50_Q6AML8 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AML8_DESPS Length = 115 Score = 96.2 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 4/99 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L++++K+ LKGLAH L V +G LT ++ + L+ HEL+KVKI K Sbjct: 17 LNSREKKFLKGLAHSLAVGVQIGKEDLTPSLIDATKLELDRHELVKVKIGKSSGLDKKEA 76 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKE----RKISLPR 97 E + T + VQ+IGKT+VLY+ KE ++I LPR Sbjct: 77 SEKLPLLTESSFVQLIGKTIVLYKENKEIVKDKRIRLPR 115 >UniRef50_D1AKP9 Putative uncharacterized protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AKP9_SEBTE Length = 106 Score = 95.4 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR-ETK 59 M LS+KQ+ LK +AH L+PVV +G + +L I + ELIKVK+ + Sbjct: 1 MKLSSKQRALLKKMAHDLEPVVRIGKGEVDGDLLESISNVINKRELIKVKVLQNSELDNM 60 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPTKER 91 + + +T + V IGK ++L++P KE Sbjct: 61 KDLGFELAEKTSSVFVDKIGKVIILFKPKKEN 92 >UniRef50_C7TK22 RNA-binding protein n=8 Tax=Lactobacillus RepID=C7TK22_LACRL Length = 103 Score = 95.0 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 4/97 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK++L+ LA KP++ +G NGL + +A ++ A+E EL+K+ + +T + Sbjct: 2 LTGKQKRYLRSLAMTTKPLIQVGKNGLGDAFVAGVKDAIETRELVKISLLPTADDTPQEV 61 Query: 63 VEAIVRE-TGACNVQVIGKTLVLYR---PTKERKISL 95 + + G Q+IG+T+++Y+ ++ R+ISL Sbjct: 62 ADTLQAAIAGLEVAQIIGRTVIVYKQAEKSEHRRISL 98 >UniRef50_C9KQ51 CRS1 / YhbY domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ51_9FIRM Length = 84 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Query: 14 LAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGAC 73 + L+PVV +G G+T V+ +A++ ELIKV++ E + + A Sbjct: 1 MGMKLEPVVQIGKEGVTPSVVQAAREAIKKRELIKVRVLQNCMELPADAIAMVAERADAN 60 Query: 74 NVQVIGKTLVLYRPT-KERKISLP 96 VQVIG+ +L++ ++ KI LP Sbjct: 61 LVQVIGRNGLLFKRNFEKPKIELP 84 >UniRef50_D1AXZ7 Putative uncharacterized protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AXZ7_STRM9 Length = 112 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 1/90 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT-L 61 +++K++ L+ AH L+PVV +G GLT+ V+ I+ +E +EL+KVK+ E Sbjct: 1 MNSKERNFLRKRAHGLEPVVRVGKEGLTDMVIESIKSYIEKNELMKVKLLQNSLEDVNIE 60 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKER 91 ++ I + V +GK ++ ++ +++ Sbjct: 61 LINEIETKAKCFFVGSVGKVMIFFKEKRDK 90 >UniRef50_B9HRH4 Predicted protein (Fragment) n=4 Tax=rosids RepID=B9HRH4_POPTR Length = 99 Score = 93.9 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVVL---LGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L+ K+K+ L AH L + +G +G T+ V + LE +EL+K+KI Sbjct: 1 LTVKEKKELASYAHGLGKKLKSQLIGKSGFTDNVATSFIETLEANELLKIKIHRTCPGEL 60 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPT 88 +V + TG+ V IG+T+++YRP+ Sbjct: 61 EDVVRRLEEATGSVVVGQIGRTVIIYRPS 89 >UniRef50_C8NZI1 RNA-binding protein YhbY n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZI1_ERYRH Length = 94 Score = 92.7 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 45/93 (48%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS QK+ LK ++H K V +G NGLTE V E ++ H L+KV I T Sbjct: 2 LSKDQKKELKRISHEEKTTVFIGKNGLTETVYETFETSMLAHNLVKVSIQKNSDVTILEA 61 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISL 95 VEA V IG+ V YR +K +I + Sbjct: 62 VEAFEDRFSCDLVSKIGRVAVFYRFSKNGRIKV 94 >UniRef50_Q38VT8 Putative uncharacterized protein n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38VT8_LACSS Length = 105 Score = 92.7 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ KQK +L+GLA KP+ LG NGL+E +IE+A+E ELIK+ + T + Sbjct: 2 LTGKQKHYLRGLAQTTKPLFQLGKNGLSEAYFEQIEEAIEKRELIKINLLQTTEVTVDEL 61 Query: 63 VEAIVRETGA-CNVQVIGKTLVLYRPTKERKIS 94 + + Q IG+TLV+Y+ +++ K Sbjct: 62 ANFLKQHDNRIEIAQKIGRTLVIYKASRKEKYQ 94 >UniRef50_Q58068 Probable RNA-binding protein MJ0652 n=11 Tax=Methanococcales RepID=Y652_METJA Length = 134 Score = 91.6 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 3/90 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR--ETK 59 L+ K K+ L+ AH L+PVV +G G +E V+ E+++ L+ LIKVK+ E K Sbjct: 12 KLTGKMKRMLRAKAHHLEPVVWVGKEG-SEKVIKEVDRQLKERGLIKVKVRKAALLYEDK 70 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPTK 89 I E + + A V V+G + L+RP + Sbjct: 71 YEIAEKLAKACDAEVVSVVGHVITLFRPRE 100 >UniRef50_C8QYL8 Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYL8_9DELT Length = 157 Score = 86.2 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 2/99 (2%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L + L+ H L P V++G GLT VLA +E L HEL+K+KI E KT Sbjct: 7 LYLRGSLARELRAQGHHLNPTVMVGREGLTAAVLAALEAVLTAHELVKIKIQEGCPEDKT 66 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR--PTKERKISLPR 97 + + + ++ + VQ+IG T++LYR P +R PR Sbjct: 67 TVAQQLAADSNSRIVQIIGGTILLYRRLPPAKRHSDGPR 105 >UniRef50_B5JKD4 CRS1 / YhbY domain superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKD4_9BACT Length = 95 Score = 85.8 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS+K+K L+G A LKP + +G NGL E V+ EI +A E ELIK+ +R + Sbjct: 4 LSSKEKAELRGAAQRLKPAIHIGKNGLGEPVVLEIRKAFERDELIKIDF-KAERPEIESM 62 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKER 91 I R+T + V +GK +R E Sbjct: 63 SLEIERKTQSQCVGGVGKKRSFHRKMPEP 91 >UniRef50_D1INN2 Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=4 Tax=rosids RepID=D1INN2_VITVI Length = 1028 Score = 84.6 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 43/86 (50%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L ++ + LKG+ ++ + +G G+TEG++ I + E++K++ + Sbjct: 184 LTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMK 243 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 + + R+TG + G ++LYR Sbjct: 244 RTHDILERKTGGLVIWRSGSYIILYR 269 Score = 66.9 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%) Query: 2 NLSTKQKQHLKGLAHPLK--PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET- 58 LS +++ L+ A +K PV+ +G + + GV I+ + H L V + + T Sbjct: 898 PLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVAKTIKAHFQKHPLAIVNVKGRAKGTS 957 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYR 86 ++ + + TGA V ++LYR Sbjct: 958 VQEVIFKLEQATGAVLVSQEPSKVILYR 985 Score = 60.8 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ +++ L+ + +KP +LLG G+ +G + + ++ EL+K+ E + Sbjct: 606 ITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGV 665 Query: 63 VEAIVRETGACNVQVI----GKTLVLYR 86 + E+G V V G +++YR Sbjct: 666 ARTLEAESGGILVAVERVSKGYAIIMYR 693 >UniRef50_Q0JCK3 Os04g0464800 protein n=10 Tax=Poaceae RepID=Q0JCK3_ORYSJ Length = 1042 Score = 83.9 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 42/86 (48%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L + + L+G L+ + +G G+TEG++ I + + EL+K++ Sbjct: 139 LALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMK 198 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 E + R+TG + G T++LYR Sbjct: 199 RTHEILERKTGGLVIWRSGSTIILYR 224 Score = 74.6 bits (183), Expect = 9e-13, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 3/88 (3%) Query: 2 NLSTKQKQHLKGLAHPLK--PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIA-TEDRET 58 LS +++ L+ A +K PV+ +G N + GV I+ + H L V I D Sbjct: 880 PLSNRERLMLRKQALKMKKRPVLAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTP 939 Query: 59 KTLIVEAIVRETGACNVQVIGKTLVLYR 86 ++ + TG+ V ++LYR Sbjct: 940 IQQLISELEEATGSVLVSREPNKVILYR 967 Score = 56.1 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 +S +++ L+ + +K +LLG G+ +G + + ++ EL+K+ + + Sbjct: 580 ISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKEHNIKDVEYA 639 Query: 63 VEAIVRETGACNVQVI----GKTLVLYR 86 + E+G V V +++YR Sbjct: 640 ARTLEAESGGILVAVERVSKAHAIIIYR 667 >UniRef50_Q9SGI0 T13O15.1 protein n=2 Tax=Arabidopsis thaliana RepID=Q9SGI0_ARATH Length = 1020 Score = 83.9 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 38/86 (44%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L + + L+ + L + +G G+TEG++ I + E++K+ R Sbjct: 164 LTLPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKIFCEDISRMNMK 223 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 + + +TG + G ++LYR Sbjct: 224 RTHDVLETKTGGLVIWRSGSKILLYR 249 Score = 64.2 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ +K L+ + +KP +LLG G+ +G + + ++ EL+K+ E + Sbjct: 588 ITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKV 647 Query: 63 VEAIVRETGACNVQVI----GKTLVLYR 86 E + E+G V V G +++YR Sbjct: 648 AEILEAESGGILVAVEMVSKGYAIIVYR 675 Score = 55.7 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Query: 3 LSTKQKQHLKGLAHPLK--PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIAT-EDRETK 59 LS +++ L+ A +K P +G + + G+ ++ + + L V + + + Sbjct: 884 LSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSV 943 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR 86 ++ + ETGA V ++LYR Sbjct: 944 QEVIAKLKEETGALLVSQEPSKVILYR 970 >UniRef50_A8MR13 Uncharacterized protein At4g31010.2 n=1 Tax=Arabidopsis thaliana RepID=A8MR13_ARATH Length = 341 Score = 83.1 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%) Query: 2 NLSTKQKQHLKGLAHPLKPV--VLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 +L+ +++ L L K V LG +GLT +L ++ +H E ++VK Sbjct: 158 SLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDM 217 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR-----PTKERKISL 95 ++ + +T V TLVLYR P K KI L Sbjct: 218 KNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPL 258 >UniRef50_C4V0X4 RNA binding protein n=2 Tax=Selenomonas RepID=C4V0X4_9FIRM Length = 81 Score = 82.7 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Query: 16 HPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNV 75 + VV++G G++ V+A + ++ ELIKV++ E + + A V Sbjct: 1 MTEEAVVMIGKEGVSPAVVASAREVIKKRELIKVRVLQNAPEEPADAITMLAERADANLV 60 Query: 76 QVIGKTLVLYRPT-KERKISL 95 QVIG+ +L++ + +I L Sbjct: 61 QVIGRNGLLFKRNFDKPRIEL 81 >UniRef50_Q8VYD9 CRS2-associated factor 1, mitochondrial n=8 Tax=Magnoliophyta RepID=CAF1M_ARATH Length = 405 Score = 81.9 bits (202), Expect = 6e-15, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 7/101 (6%) Query: 2 NLSTKQKQHLKGLAHPLKPV--VLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 +L+ +++ L L K V LG +GLT +L ++ +H E ++VK Sbjct: 158 SLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDM 217 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR-----PTKERKISL 95 ++ + +T V TLVLYR P K KI L Sbjct: 218 KNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPL 258 Score = 38.4 bits (89), Expect = 0.079, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 32/84 (38%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS + + ++ + + L NG ++ + A EL+++ +R+ I Sbjct: 279 LSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKI 338 Query: 63 VEAIVRETGACNVQVIGKTLVLYR 86 + V + +V++R Sbjct: 339 GAKLRDLVPCILVTFDKEQVVIWR 362 >UniRef50_B9XGY3 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XGY3_9BACT Length = 85 Score = 81.6 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query: 18 LKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQV 77 ++P++ +G GL+E L +++AL HHEL+K+K A + +E K + + +T + V Sbjct: 1 MEPILKVGKAGLSEAFLKSVDEALAHHELVKIKFA-DFKEEKKTLSPQLAEKTSSHLVMR 59 Query: 78 IGKTLVLYRPTKE 90 +G +VLYR E Sbjct: 60 VGNVVVLYRKKAE 72 >UniRef50_A8TFT3 Putative uncharacterized protein n=1 Tax=Methanococcus voltae A3 RepID=A8TFT3_METVO Length = 132 Score = 80.8 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 3/89 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE--DRETKT 60 +++K K+ L+ + ++PVV +G G+ E V+ E+ + L+ LIK+KI + K Sbjct: 10 ITSKAKKILRSQSQSIEPVVWVGKEGV-EKVIEEVRRQLKDKSLIKIKIRRSAIEGMEKD 68 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRPTK 89 I + I T + V ++G + L++P + Sbjct: 69 EIAKIITDSTDSEVVSIVGNVITLFKPKE 97 >UniRef50_A8ICQ7 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8ICQ7_CHLRE Length = 267 Score = 79.2 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 5/98 (5%) Query: 2 NLSTKQKQHLKGLAHPLKP-----VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR 56 + K ++ + A L V +G G+T L L+ H L++VK+ Sbjct: 114 PMHIKDRKLWRARAEALAKEKKLIRVQVGQLGITPAFLRATSDVLQKHGLVRVKLGEGSG 173 Query: 57 ETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKIS 94 + + + R A V IG T+ LYR + + Sbjct: 174 VERANAADVLERYLDAVCVHQIGFTITLYRRQGLPRPT 211 >UniRef50_Q0W1M5 Putative uncharacterized protein n=2 Tax=Euryarchaeota RepID=Q0W1M5_UNCMA Length = 87 Score = 78.9 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET--KT 60 + TK+ L+G+A ++ +G NG+T ++ E+ + L+ ++L+KVK+ E K Sbjct: 1 MDTKKILELRGMAARMEASTHIGKNGVTPSLIEEVSRQLKDNKLVKVKVLKSAFEEMPKE 60 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYRP 87 I + + +TG+ ++V G T+VL++ Sbjct: 61 EIAKLLAEKTGSELIEVKGNTIVLFKR 87 >UniRef50_B9RHB6 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9RHB6_RICCO Length = 311 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 20/105 (19%) Query: 2 NLSTKQKQHLKGLAHPLKPVVL---LGSNGLTEGVLAEIEQAL---------------EH 43 NL+ K+K+ L A+ L + +G +G+T+ V + L E Sbjct: 162 NLTVKEKKELASYANSLGKKLKSQLVGKSGVTDNVATSFIETLKQMSXRIVWCAKPVLEC 221 Query: 44 HELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPT 88 E IK+ +V+ + TG+ V IG+T+++YRP+ Sbjct: 222 SEQIKI--HRTCPGELEDVVQRLQEATGSVVVGQIGRTVIIYRPS 264 >UniRef50_Q2R1U8 CRS1/YhbY domain containing protein, expressed n=3 Tax=Oryza sativa RepID=Q2R1U8_ORYSJ Length = 886 Score = 78.5 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L + + L+ LK + +G G+T ++ I + E++++K+ Sbjct: 174 LTLPEAELRRLRHAGMRLKSRIKVGGAGVTREIVERIRDRWRNDEVVRIKVTGTPALNMR 233 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 L E + R+TG + G ++ LYR Sbjct: 234 LFHEILERKTGGLVIWRSGTSVSLYR 259 Score = 61.9 bits (150), Expect = 7e-09, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 ++ +++ + L +K +LLG G+ +G + + ++ EL+K+ + + Sbjct: 591 TITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKK 650 Query: 62 IVEAIVRETGACNVQV----IGKTLVLYR 86 I ++ E+G V V G +V++R Sbjct: 651 IALSLEAESGGILVSVDKVSKGYAIVVFR 679 >UniRef50_Q5JK63 cDNA clone:J013093H11, full insert sequence n=8 Tax=Magnoliophyta RepID=Q5JK63_ORYSJ Length = 417 Score = 77.3 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L +++ +LK ++ V +G G+ GV+ + + HE +KV Sbjct: 172 LDGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEY 231 Query: 63 VEAIVRETGACNVQVIGK-TLVLYR 86 I R +G + IG T+V YR Sbjct: 232 ASEIARLSGGIPINTIGNDTIVFYR 256 >UniRef50_Q5JK62 Group II intron splicing factor CRS1-like n=5 Tax=Magnoliophyta RepID=Q5JK62_ORYSJ Length = 394 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L +++ +LK ++ V +G G+ GV+ + + HE +KV Sbjct: 172 LDGEERFYLKKVSQKKSNYVPVGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEY 231 Query: 63 VEAIVRETGACNVQVIGK-TLVLYR 86 I R +G + IG T+V YR Sbjct: 232 ASEIARLSGGIPINTIGNDTIVFYR 256 >UniRef50_Q12W46 RNA-binding protein n=4 Tax=Methanosarcinaceae RepID=Q12W46_METBU Length = 86 Score = 76.2 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Query: 6 KQKQH-LKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATED--RETKTLI 62 K++ + L+ A +KP++ +G G+T+ ++ E+++ ++ L+KVK+ + I Sbjct: 3 KERLYKLRSEATNIKPIINVGKGGITDQLIMELKKHIKERHLVKVKVLKSASYEDGIDAI 62 Query: 63 VEAIVRETGACNVQVIGKTLVLYR 86 E + T + V G ++VLYR Sbjct: 63 AENLAEATRTTVIDVRGSSVVLYR 86 >UniRef50_Q9LS51 Gb|AAF24608.1 n=7 Tax=Magnoliophyta RepID=Q9LS51_ARATH Length = 848 Score = 75.8 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 34/80 (42%) Query: 7 QKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAI 66 + + L+ L+ + + GLT+ V+ +I EL+++K E + Sbjct: 247 ELRRLRRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIV 306 Query: 67 VRETGACNVQVIGKTLVLYR 86 R TG + G +V+YR Sbjct: 307 ERRTGGMVIWRAGSVMVVYR 326 Score = 57.3 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 6/101 (5%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 +S +++ + + +K + +G G+ +GV+ + +H EL+K+ +++ Sbjct: 653 ISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEET 712 Query: 63 VEAIVRETGACNVQVI----GKTLVLYR-PTKERKISL-PR 97 + E+G V + G L+ YR R ISL PR Sbjct: 713 ARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPR 753 >UniRef50_A2BN52 Conserved archaeal protein n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BN52_HYPBU Length = 120 Score = 75.4 bits (185), Expect = 6e-13, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 9 QHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE----DRETKTLIVE 64 LK + V++G GLTE VL EI++ L+ ++KVK + + + Sbjct: 6 ARLKEIVQQGPADVIIGKKGLTEAVLKEIDRRLKEKGIVKVKALKSAIKVTGLDRRELAK 65 Query: 65 AIVRETGACNVQVIGKTLVLYRPTKERK 92 + A + V G+T VLYRP + + Sbjct: 66 TVAERLNARLLDVRGRTFVLYRPEPQTR 93 >UniRef50_C1VAK9 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=10 Tax=Halobacteriaceae RepID=C1VAK9_9EURY Length = 82 Score = 75.0 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Query: 8 KQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR--ETKTLIVEA 65 KQ L+ AH + V +G +G++ V E+ L +L+K+K R T + E Sbjct: 3 KQDLRKEAHDIDVTVWVGKSGIS-AVEEELSDQLADRDLVKIKFLRSARAGTTVEELTEE 61 Query: 66 IVRETGACNVQVIGKTLVLYR 86 + A ++ G T V++R Sbjct: 62 LADRVNAEVIETRGNTGVVHR 82 >UniRef50_C6A1U4 Predicted RNA-binding protein, CRS1/YhbY family n=9 Tax=Thermococcaceae RepID=C6A1U4_THESM Length = 141 Score = 75.0 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE----DRE 57 L K ++ ++ + ++P +G GL E V++EI L+ ++KV+I Sbjct: 7 RLPGKVRRAIRAKYYDIEPKAWVGRKGLEESVISEIATQLKKDGILKVEIRKGAFTSTNM 66 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYRPTK 89 + I E + T + + V GK +L+RP + Sbjct: 67 DRESIAEKVAELTDSELIDVRGKRFILFRPRE 98 >UniRef50_A6DTJ2 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTJ2_9BACT Length = 91 Score = 74.2 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 44/89 (49%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +S + + L+ L+ ++G GLT+ + I +A +LIKV + + E Sbjct: 3 KISGSEARALRAKGAQLEASAVIGKRGLTDENIKIINEAFLKQDLIKVTVRKKAFENPKD 62 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTKE 90 V+ I + A VQ +G L+LY+ +++ Sbjct: 63 EVQNIATQFEATIVQHLGSALLLYKSSED 91 >UniRef50_Q8U0T5 Putative uncharacterized protein n=1 Tax=Pyrococcus furiosus RepID=Q8U0T5_PYRFU Length = 139 Score = 73.8 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 4/92 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE----DRE 57 L K ++ L+ + ++P +G GL E V+ EIE L ++KV+I + Sbjct: 5 RLPGKIRRALRARYYDIEPKAWIGKRGLEESVIKEIENQLARTGVLKVEIRKGALIATKM 64 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYRPTK 89 T+ I E + T + ++V GK +L++P + Sbjct: 65 TRKQIAEKVAELTDSELLEVRGKRFILFKPRE 96 >UniRef50_C5XAP2 Putative uncharacterized protein Sb02g022940 n=1 Tax=Sorghum bicolor RepID=C5XAP2_SORBI Length = 962 Score = 72.3 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 39/85 (45%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 + + + L+ A +K + +G G+T+ ++ I + + E++K++ Sbjct: 352 TIPEPELRRLRDTALRMKERIKVGPGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKR 411 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + TG + G+++VLYR Sbjct: 412 THDLLEDRTGGVVIWRSGRSVVLYR 436 Score = 55.7 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 42/100 (42%), Gaps = 6/100 (6%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 + +++ + + ++ ++LG + +G + + +H EL+K+ + + I Sbjct: 765 TDEERFLFRRIGLKMRAFLMLGRREVFDGTVQNMHLHWKHRELVKIIVRGKSFAQVKHIA 824 Query: 64 EAIVRETGACNVQ----VIGKTLVLYRPT--KERKISLPR 97 ++ E+ + G ++ YR + +I PR Sbjct: 825 ISLEAESEGVLISLDKTSKGYAIIFYRGKNYRRPQIMKPR 864 >UniRef50_A9SZH0 Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SZH0_PHYPA Length = 1106 Score = 71.9 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 35/86 (40%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 + L + + L+ L L+ + +G G+T G++ I EL KVK Sbjct: 323 LTLPEPELRRLRTLGLQLQGRLKIGRLGVTPGIVEAIHDRWRTSELAKVKCDAPLSMNMK 382 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 E + R TG + G V+YR Sbjct: 383 KAHEDLERLTGGLVIWRAGSAAVVYR 408 Score = 67.3 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 6/100 (6%) Query: 2 NLSTKQKQHLKGL---AHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE- 57 L+ KQ+QHL+ +G L E + I L+ H +KV + + Sbjct: 937 PLTRKQRQHLRQQIPLMLGRTANFNIGKTTLYEDLAKSICAYLQKHPFVKVGVKGRPKGS 996 Query: 58 TKTLIVEAIVRETGACNVQVIGKTLVLYR--PTKERKISL 95 + +VE I TGA V L+ YR P E + L Sbjct: 997 SVASVVEQIEEHTGAVLVSTEPSKLIFYRGWPAGEERPDL 1036 Score = 53.4 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS ++ + K +LLG G+ G + + +H EL+K+ + Sbjct: 753 LSEAERYMYRQQGLKHKGYLLLGRRGVFGGTVENMHLHWKHRELVKI-LVKAPIAEAQQT 811 Query: 63 VEAIVRETGACNVQVI----GKTLVLYR 86 + + RE+G V ++ G+ +++YR Sbjct: 812 AKMLERESGGILVDIVNTSKGQAIIVYR 839 >UniRef50_A5UL37 RNA-binding protein, CRS1/YhbY family n=4 Tax=Methanobacteriaceae RepID=A5UL37_METS3 Length = 85 Score = 71.5 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 38/69 (55%) Query: 21 VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGK 80 + +G G+ + V+ EI++ L+ +E++K+K A + K + IV++T + + V G Sbjct: 17 TMNIGKAGVNDNVIEEIKRQLKANEIVKLKFAKNIAKNKDDYIADIVQKTRSKLIDVRGN 76 Query: 81 TLVLYRPTK 89 V+Y+ Sbjct: 77 VAVIYKKKP 85 >UniRef50_A3CX00 Putative uncharacterized protein n=2 Tax=Methanomicrobiales RepID=A3CX00_METMJ Length = 86 Score = 71.5 bits (175), Expect = 9e-12, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Query: 16 HPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNV 75 LKP + +G G+T ++ EI + L+ +++KV+ E I GA V Sbjct: 7 QDLKPTIWIGKRGITNVMIDEIRRQLKDRKVVKVRWLRNTEVDP----EEIAASAGAVLV 62 Query: 76 QVIGKTLVL-YRPTKER 91 +V G+TLVL R + Sbjct: 63 EVRGRTLVLTERRNRSP 79 >UniRef50_UPI0001C41D91 RNA-binding protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41D91 Length = 71 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 36/67 (53%) Query: 21 VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGK 80 + +G G+ + V+ EI++ L+ + +IK++ A K ++ +IV T + + V G Sbjct: 2 TINIGKAGVNDNVIEEIKRQLKSNPIIKLRFAKNVARNKDDLINSIVEGTKSQLIDVRGN 61 Query: 81 TLVLYRP 87 V+Y+ Sbjct: 62 VAVIYKK 68 >UniRef50_Q9YD21 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix RepID=Q9YD21_AERPE Length = 107 Score = 70.8 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 13 GLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE----DRETKTLIVEAIVR 68 AH + V++G G+T VL EI+ LE E++KVK+ + + + + Sbjct: 9 RRAHHGRADVIIGKAGVTREVLREIDARLEKKEVVKVKMLKTALKREEGGRRELARRVAG 68 Query: 69 ETGACNVQVIGKTLVLYRPTK 89 GA + V G T +LYRP + Sbjct: 69 SLGARLMGVRGYTFILYRPRR 89 >UniRef50_Q9P9D4 RNA-binding protein n=1 Tax=uncultured marine group II euryarchaeote 37F11 RepID=Q9P9D4_9EURY Length = 87 Score = 70.0 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 17 PLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE--DRETKTLIVEAIVRETGACN 74 L + +G +GLT+ V+ E+E L L+KVK+ R+ + + +T + Sbjct: 15 SLPITMRIGKSGLTDSVVVELEGQLSSRSLVKVKVNRGLYPRDELKTVWNIMAEKTNSSV 74 Query: 75 VQVIGKTLVLYR 86 V G V +R Sbjct: 75 VFARGNVAVFWR 86 >UniRef50_A9S7Z4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S7Z4_PHYPA Length = 548 Score = 69.2 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 3/97 (3%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ +Q LK L + K V +G G+ G + + + HE +++ +E + Sbjct: 225 LTPEQLYALKKLGYKNKNYVPVGRRGIYGGTIQNMHMHWKKHETVRIDCDNFPKEKIKEM 284 Query: 63 VEAIVRETGACNVQVI-GKTLVLYRPT--KERKISLP 96 E + R +G + + G T++++R K K+ +P Sbjct: 285 GETLERLSGGIVIDIHQGTTIIMWRGRNYKRPKVDIP 321 >UniRef50_Q6K4E4 Os09g0363100 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q6K4E4_ORYSJ Length = 947 Score = 68.8 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 39/85 (45%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 + + + L+ +A +K + +G G+T+ ++ I Q E++K++ Sbjct: 340 TIPEHELRRLRDVALRMKERMRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKR 399 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + TG + G+++VLYR Sbjct: 400 THDILEERTGGIVIWRSGRSVVLYR 424 Score = 61.1 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 + +++ L+ + +K ++LG + +G + + +H EL+KV + + I Sbjct: 752 TDEERFLLRRIGLKMKAFLMLGRREVFDGTVQNMHLHWKHRELVKVLVKGKSFPQVKHIA 811 Query: 64 EAIVRETGACNVQV----IGKTLVLYRPT--KERKISLPR 97 ++ E+G + V G ++LYR K +I PR Sbjct: 812 ISLEAESGGVLISVDKTTKGYAIILYRGKNYKTPQILKPR 851 Score = 42.3 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 1/86 (1%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L K+ L+ LA P LG N +G+ I + E + K+ I T Sbjct: 537 TLRNKEMTALRRLARQTAPHFALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCND 596 Query: 62 -IVEAIVRETGACNVQVIGKTLVLYR 86 + E I + TG + + +V YR Sbjct: 597 RMAEEIRKLTGGVLLSRNKEYIVFYR 622 >UniRef50_UPI00019841A3 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI00019841A3 Length = 855 Score = 68.8 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 37/80 (46%) Query: 7 QKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAI 66 + + LK +A + + +G+ G+T+ ++ I + E++K+K E + Sbjct: 271 ELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEIL 330 Query: 67 VRETGACNVQVIGKTLVLYR 86 TG + G ++VLYR Sbjct: 331 ETRTGGLVIWRTGSSVVLYR 350 Score = 48.8 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 6/86 (6%) Query: 5 TKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVE 64 K ++ L+ + L+P G+ G+ +G + + ++ EL+K+ + ++ I Sbjct: 658 KKTEKALRKVQEDLEPAE--GTRGIFDGTVENMHLHWKYRELVKIIVKGKNFAQVKHIAI 715 Query: 65 AIVRETGACNVQV----IGKTLVLYR 86 ++ E+G V V G +++YR Sbjct: 716 SLEAESGGVLVSVDRTPKGYAIIVYR 741 >UniRef50_A2XVM7 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2XVM7_ORYSI Length = 893 Score = 68.8 bits (168), Expect = 5e-11, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 39/85 (45%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 + + + L+ +A +K + +G G+T+ ++ I Q E++K++ Sbjct: 339 TIPEHELRRLRDVALRMKERMRVGPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKR 398 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + TG + G+++VLYR Sbjct: 399 THDILEERTGGIVIWRSGRSVVLYR 423 Score = 61.1 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIV 63 + +++ L+ + +K ++LG + +G + + +H EL+KV + + I Sbjct: 697 TDEERFLLRRIGLKMKAFLMLGRREVFDGTVQNMHLHWKHRELVKVLVKGKSFPQVKHIA 756 Query: 64 EAIVRETGACNVQV----IGKTLVLYRPT--KERKISLPR 97 ++ E+G + V G ++LYR K +I PR Sbjct: 757 ISLEAESGGVLISVDKTTKGYAIILYRGKNYKTPQILKPR 796 Score = 41.9 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 1/86 (1%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L K+ L+ LA P LG N +G+ I + E + K+ I T Sbjct: 482 TLRNKEMTALRRLARQTAPHFALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCND 541 Query: 62 -IVEAIVRETGACNVQVIGKTLVLYR 86 + E I + TG + + +V YR Sbjct: 542 RMAEEIRKLTGGVLLSRNKEYIVFYR 567 >UniRef50_Q657G7 CRS2-associated factor 2, chloroplastic n=7 Tax=Poaceae RepID=CAF2P_ORYSJ Length = 607 Score = 68.5 bits (167), Expect = 7e-11, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 9/101 (8%) Query: 2 NLSTKQKQHLKG--LAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L+ + + L ++H + + +G +GLT +L I E+ KV+ Sbjct: 229 PLTAAEVRDLVKPHISHNRQ--LNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDM 286 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR-----PTKERKISL 95 + + ++G + +G + LYR P + L Sbjct: 287 KNLCYHLEEKSGGKVIHRVGGVVFLYRGRNYNPRTRPRYPL 327 Score = 45.0 bits (106), Expect = 8e-04, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 38/101 (37%), Gaps = 6/101 (5%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ ++ L P+ L NG+ ++ ++ A E +L+K+ + I Sbjct: 348 LTKEEADEMRRRGKDLLPICKLAKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKI 407 Query: 63 VEAIVRETGACNVQVIGKTLVLYR------PTKERKISLPR 97 + + + ++++R + +P+ Sbjct: 408 GAKLRDLVPCVLLSFDNEQILMFRGKEWKSRYPKPLTLIPK 448 >UniRef50_D2RG85 Putative uncharacterized protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RG85_ARCPR Length = 74 Score = 68.1 bits (166), Expect = 8e-11, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%) Query: 21 VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR------ETKTLIVEAIVRETGACN 74 + +G G+TEGV+ EI QALE H ++KV++ R + + + I + Sbjct: 3 TINIGKRGITEGVINEINQALEKHGMVKVRMLRNFRTITMKGMDRRELAKEIAKHVNGKL 62 Query: 75 VQVIGKTLVLYR 86 V + G L R Sbjct: 63 VDLRGFVLTFKR 74 >UniRef50_Q5VMQ5 CRS2-associated factor 1, chloroplastic n=3 Tax=Oryza sativa RepID=CAF1P_ORYSJ Length = 701 Score = 67.3 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 32/85 (37%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ ++ L K + +G +GLT +L I + + K+K Sbjct: 184 PLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDN 243 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + + + G + G + L+R Sbjct: 244 VCQQLEEKVGGKVIHHQGGVIFLFR 268 Score = 55.0 bits (132), Expect = 7e-07, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ + + ++ L P+ LG NG+ ++ ++ +A E +L++V + ++ I Sbjct: 303 LTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKI 362 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTKERKISLP 96 + + + ++++R + K SLP Sbjct: 363 GAKLKDLVPCTLLSFEFEHILMWRGN-DWKSSLP 395 >UniRef50_Q9SL79 CRS2-associated factor 1, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=CAF1P_ARATH Length = 701 Score = 66.9 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 32/85 (37%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ ++ + L + +G +GLT +L I + + K+K Sbjct: 242 PLTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDN 301 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + E + + G + G L L+R Sbjct: 302 VCEQLEEKIGGKVIYRRGGVLFLFR 326 Score = 51.5 bits (123), Expect = 8e-06, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 36/84 (42%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ +++ L P+ LG NG+ ++ +++A E EL+++ I Sbjct: 361 LTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKI 420 Query: 63 VEAIVRETGACNVQVIGKTLVLYR 86 + V + ++++R Sbjct: 421 GAKLKDLVPCVLVSFENEQILIWR 444 >UniRef50_A1RYP6 Putative uncharacterized protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RYP6_THEPD Length = 112 Score = 66.5 bits (162), Expect = 3e-10, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%) Query: 20 PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET----KTLIVEAIVRETGACNV 75 PVV +G GL EGV+ EI LE ++KVK+ RET + I + GA + Sbjct: 38 PVVNVGKKGLDEGVIEEINNILESRGIVKVKLLKNFRETYGLSPEEVAVIISQRLGAEIL 97 Query: 76 QVIGKTLVLYRPTK 89 V G + +R + Sbjct: 98 GVRGFV-IAFRKRR 110 >UniRef50_D1I399 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=6 Tax=Embryophyta RepID=D1I399_VITVI Length = 723 Score = 66.1 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 34/85 (40%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ ++ + L K + +G +GLT +L I + + K+K Sbjct: 243 PLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDN 302 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + + +TG + G L L+R Sbjct: 303 VRQQLEEKTGGKVIYGKGGVLFLFR 327 Score = 48.0 bits (114), Expect = 8e-05, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 28/74 (37%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ ++ L P+ L NG+ ++ + +A E EL+++ + I Sbjct: 362 LTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKI 421 Query: 63 VEAIVRETGACNVQ 76 + + Sbjct: 422 GAKLKDLVPCVLIS 435 >UniRef50_D2RYN4 Putative uncharacterized protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RYN4_9EURY Length = 82 Score = 65.4 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%) Query: 9 QHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR--ETKTLIVEAI 66 Q LK AH L V +G +G+ + V+ E++ L+ +L+KVK+ R + + Sbjct: 4 QELKQQAHDLDVTVWVGKSGI-DAVVDELDDQLDDRDLVKVKLLRAARAGGSTEEKAADL 62 Query: 67 VRETGACNVQVIGKTLVLYR 86 A ++ G T V YR Sbjct: 63 ADRVNAELIETRGHTAVFYR 82 >UniRef50_Q0DCP4 Os06g0304500 protein n=8 Tax=Magnoliophyta RepID=Q0DCP4_ORYSJ Length = 348 Score = 65.4 bits (159), Expect = 6e-10, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 1/85 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++K +LK K V +G G+ GV+ + + HE +KV Sbjct: 182 LTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCRPGQVYEY 241 Query: 63 VEAIVRETGACNVQVIG-KTLVLYR 86 E + R + + + T++ YR Sbjct: 242 AEELTRLSKGTVIDIKPNNTIIFYR 266 >UniRef50_Q7XSB6 Os04g0492900 protein n=4 Tax=Oryza sativa RepID=Q7XSB6_ORYSJ Length = 479 Score = 65.4 bits (159), Expect = 6e-10, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 10/105 (9%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ + + K V +G G+ +GV+ + + H+ ++V + T + I Sbjct: 179 LTPEEHFYFLKMGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPDEVKEI 238 Query: 63 VEAIVRETGACNVQV-IGKTLVLYR------PTKE---RKISLPR 97 + R +G + + G T+++YR P E K++LPR Sbjct: 239 ASELARLSGGIVLDIQEGNTIIMYRGKNYAQPPPEIMSPKVTLPR 283 >UniRef50_Q2FTK1 RNA-binding protein containing KH domain possibly ribosomal protein-like n=2 Tax=Methanomicrobiales RepID=Q2FTK1_METHJ Length = 82 Score = 65.0 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Query: 16 HPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNV 75 H LKP + +G G+++ +L EI+ ++ ++IKVK + + + + Sbjct: 11 HDLKPTIWIGKQGMSDTILDEIQNQIKVRKVIKVKWLSSVEIDPESVAAQ----SRTKLL 66 Query: 76 QVIGKTLVL 84 QV G+T+VL Sbjct: 67 QVRGRTMVL 75 >UniRef50_Q4JCL7 Conserved protein n=2 Tax=Sulfolobus RepID=Q4JCL7_SULAC Length = 87 Score = 64.6 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 43/75 (57%), Gaps = 1/75 (1%) Query: 19 KPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVI 78 P + +G GL EG++ EI++ L+ H+++K++I D E + + + + A ++V Sbjct: 14 HPDIRIGKKGLNEGMVNEIKRRLKEHKVVKIRI-GADVEDRKSFAKEVADKVNAKLIEVR 72 Query: 79 GKTLVLYRPTKERKI 93 G T +L + K+ ++ Sbjct: 73 GYTFILAKEDKDDQV 87 >UniRef50_Q74MX7 NEQ428 n=1 Tax=Nanoarchaeum equitans RepID=Q74MX7_NANEQ Length = 104 Score = 64.6 bits (157), Expect = 9e-10, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 5 TKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE--DRETKTLI 62 K + L+ + +KP + +G +G+ + V+ +IE L+ E++KV I E + I Sbjct: 14 GKILRKLRSQYYDIKPTINIGKSGI-DKVIEQIENQLKVREVVKVTINKNILRMEDRFNI 72 Query: 63 VEAIVRETGA-CNVQVIGKTLVLYRPT 88 + + + + + + G+ +++ R + Sbjct: 73 AKQLQEKLKSGVIIDIRGRKILIARKS 99 >UniRef50_B9IC46 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9IC46_POPTR Length = 405 Score = 64.2 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 2 NLSTKQKQHL--KGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L+ + + L K + K + LG +GLT +L +I +H E ++VK Sbjct: 156 PLTKAEGKILVDKCQRNKTKKQINLGIDGLTHNMLNDIHNHWKHDEAVRVKCMGVPTVDM 215 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRP---TKERKISLP 96 + + +T + LVLYR + +P Sbjct: 216 KNVCTQLEDKTFGKIIHRHCGLLVLYRGRNYHPRNRPVIP 255 >UniRef50_Q84N49 CRS2-associated factor 1, chloroplastic n=3 Tax=Andropogoneae RepID=CAF1P_MAIZE Length = 674 Score = 64.2 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 32/85 (37%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ ++ L + K + +G +GLT +L I + + K+K Sbjct: 184 PLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMDN 243 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 I + + G + G + L+R Sbjct: 244 ICHQLEEKVGGKVIHRQGGVIFLFR 268 Score = 61.9 bits (150), Expect = 6e-09, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 31/66 (46%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ + ++ H L P+ LG NG+ ++ ++ +A E +L++V + ++ I Sbjct: 303 LTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKI 362 Query: 63 VEAIVR 68 + Sbjct: 363 GAKLKD 368 >UniRef50_O28209 Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus RepID=O28209_ARCFU Length = 75 Score = 63.4 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query: 21 VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE----TKTLIVEAIVRETGACNVQ 76 + +G NG+TE ++ EI LE +KV++ RE K + I + V Sbjct: 6 TINVGKNGVTESLINEINFLLEKRGAVKVRMLRNFRESSGKDKKELAREIASKVKGRLVD 65 Query: 77 VIGKTLVLYR 86 G L R Sbjct: 66 FRGFVLTFER 75 >UniRef50_UPI0001623CC4 predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001623CC4 Length = 463 Score = 62.7 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 34/85 (40%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L++ + + L A + LG +GLT +L + + + + KVK Sbjct: 90 PLTSAEVRELVTKARKEPRQINLGRDGLTHNMLNLVHEHWKRRRVCKVKCKGVPTVDMDN 149 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + +TG + G + L+R Sbjct: 150 VCRVLEEKTGGKIILRQGGAVYLFR 174 Score = 52.7 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 38/84 (45%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ +L+ L L PV LG NG+ ++ ++ A + +L+KV + I Sbjct: 209 LTIEEANNLRKLGRELPPVCHLGKNGVYVNLVRDVRNAFKVDDLVKVDCKNMNPSDYKKI 268 Query: 63 VEAIVRETGACNVQVIGKTLVLYR 86 + + ++++++R Sbjct: 269 GAKLKDLVPCVLLSFERESILMWR 292 >UniRef50_Q9FFU1 CRS2-associated factor 2, mitochondrial n=8 Tax=Magnoliophyta RepID=CAF2M_ARATH Length = 358 Score = 62.7 bits (152), Expect = 4e-09, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 7/101 (6%) Query: 2 NLSTKQKQHLKGLAHPLKPV--VLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L+ + L + LG G+T ++ +I + E +++K Sbjct: 142 TLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDM 201 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR-----PTKERKISL 95 I + ++G V LVLYR P I L Sbjct: 202 DNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPL 242 >UniRef50_A3DNH0 Putative uncharacterized protein n=2 Tax=Desulfurococcaceae RepID=A3DNH0_STAMF Length = 122 Score = 62.3 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 4/76 (5%) Query: 19 KPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIA----TEDRETKTLIVEAIVRETGACN 74 K V LG GLT+G + E++ LE H ++K+++ + + I + GA Sbjct: 26 KVDVQLGKKGLTQGFINEVKARLEKHGVVKIRMLKSYVKSTNTDRRETAKIIAKVLGAKL 85 Query: 75 VQVIGKTLVLYRPTKE 90 ++V G T ++ R + Sbjct: 86 IEVRGYTFIIARNKDK 101 >UniRef50_Q9LS85 Emb|CAB10230.1 n=10 Tax=Magnoliophyta RepID=Q9LS85_ARATH Length = 850 Score = 62.3 bits (151), Expect = 5e-09, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 39/86 (45%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M L + + L+ L + + G+T+ + I++ + E++++KI Sbjct: 188 MTLPESELRRLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKIEGASALNMR 247 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 + E + ++TG + G ++ LYR Sbjct: 248 KMHEILEKKTGGLVIWRSGTSISLYR 273 Score = 58.1 bits (140), Expect = 8e-08, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 44/89 (49%), Gaps = 4/89 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +++ +++ + L +K +LLG G+ +G + + ++ EL+K+ + + + Sbjct: 606 SITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKK 665 Query: 62 IVEAIVRETGACNVQV----IGKTLVLYR 86 + A+ E+G V + G +++YR Sbjct: 666 VALALEAESGGILVSIDKVTKGYAIIVYR 694 >UniRef50_Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic n=3 Tax=rosids RepID=Y3544_ARATH Length = 444 Score = 62.3 bits (151), Expect = 5e-09, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 10/105 (9%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ + + K V +G G+ +GV+ + + H+ ++V I T + I Sbjct: 177 LTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEI 236 Query: 63 VEAIVRETGACNVQVI-GKTLVLYR------PTKE---RKISLPR 97 + R TG + V G T+++YR P E +I+LPR Sbjct: 237 AVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPR 281 >UniRef50_B9H8U8 Predicted protein n=3 Tax=rosids RepID=B9H8U8_POPTR Length = 977 Score = 61.5 bits (149), Expect = 8e-09, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 39/84 (46%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L + + L+ +A + + +G+ G+T+ ++ I + + E++K+K Sbjct: 364 LPEHELKRLRNVALRMLERIKVGATGITQDLVDAIHEKWKLDEVVKLKFEWPLSCNMKRT 423 Query: 63 VEAIVRETGACNVQVIGKTLVLYR 86 E + TG + G ++V+YR Sbjct: 424 HEILESRTGGLIIWRSGSSVVMYR 447 Score = 60.8 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 +S +++ + + +KP + LG G+ +G + + ++ EL+K+ + + Sbjct: 779 TISDEERFLFRKIGLSMKPYLFLGRRGVFDGTIENMHLHWKYRELVKIIVERKGIAQVKH 838 Query: 62 IVEAIVRETGACNVQV----IGKTLVLYR 86 I ++ E+G V V G +++YR Sbjct: 839 IAISLEAESGGVLVSVDRTTKGYAIIVYR 867 >UniRef50_D1IJT2 Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1IJT2_VITVI Length = 529 Score = 61.5 bits (149), Expect = 8e-09, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 6/101 (5%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ ++++ + + + +LLG G+ +GV+ + Q +H E++KV Sbjct: 336 ITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYT 395 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR-PTKERKISL-PR 97 + + E+G V + G +++YR R I L P+ Sbjct: 396 AKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPK 436 Score = 41.1 bits (96), Expect = 0.011, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ + +L+ LA+ L +LG N +G+ A I + E ++K+ I TK Sbjct: 122 KLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNE 181 Query: 62 -IVEAIVRETGACNVQVIGKTLVLYR 86 + + TG + ++LYR Sbjct: 182 QMANELKCLTGGVLLLRNKFFIILYR 207 >UniRef50_O23307 Putative uncharacterized protein AT4g14510 n=2 Tax=Arabidopsis thaliana RepID=O23307_ARATH Length = 918 Score = 61.5 bits (149), Expect = 9e-09, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 40/85 (47%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 M LS + L+ + K + + G+T+ V+ I++ + E++++KI Sbjct: 206 MTLSEFELNRLRNVMFRTKSKMRVTGAGVTQAVVDAIQEKWKGSEIVRLKIEGSSALNMR 265 Query: 61 LIVEAIVRETGACNVQVIGKTLVLY 85 + E + R+TG + G ++ LY Sbjct: 266 RMHEILERKTGGLVIWRSGTSIALY 290 Score = 56.1 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 46/96 (47%), Gaps = 4/96 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ +++ + L +K +LLG G+ +G + + ++ ELIK+ + + E + Sbjct: 676 ITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKV 735 Query: 63 VEAIVRETGACNVQV----IGKTLVLYRPTKERKIS 94 A+ E+G V V G +++YR ++ + Sbjct: 736 AMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPT 771 >UniRef50_B9RSN8 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9RSN8_RICCO Length = 742 Score = 61.1 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ ++++ L+ + ++ +LLG G+ +GV+ + Q +H E++KV Sbjct: 594 MTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQVIRT 653 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR 86 + + ETG V + G +++YR Sbjct: 654 AKFLEAETGGILVSIDKLKEGHAIIIYR 681 Score = 50.3 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Query: 12 KGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKI-ATEDRETKTLIVEAIVRET 70 + A ++ V + G+T+ V+ +I A ++EL VK R E + +T Sbjct: 207 RTEASKMRKWVKVMKAGVTQSVVDQIRYAWRNNELAMVKFDLPLCR-NMDRAREIVELKT 265 Query: 71 GACNVQVIGKTLVLYR 86 G V +LV+YR Sbjct: 266 GGLVVWTRKDSLVIYR 281 >UniRef50_C8SBP0 Putative uncharacterized protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SBP0_FERPL Length = 77 Score = 61.1 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 6/72 (8%) Query: 21 VVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRE------TKTLIVEAIVRETGACN 74 + +G G+T+ V+ EI LE ++KV++ R K + + I + Sbjct: 5 TINIGKKGITDEVIKEINATLEKKGIVKVRMLKNFRNFTAGGKHKKELAQEIASKVNGKL 64 Query: 75 VQVIGKTLVLYR 86 + G L R Sbjct: 65 IDFRGFVLTFKR 76 >UniRef50_D1I5A1 Whole genome shotgun sequence of line PN40024, scaffold_127.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1I5A1_VITVI Length = 422 Score = 60.4 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 31/85 (36%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 LS + + L V LG +GLT +L I + + KV Sbjct: 62 PLSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVWCKGVPTIDMDN 121 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + +TG + +G + L+R Sbjct: 122 VCHHLEEKTGGKIIHRVGGVVYLFR 146 Score = 40.3 bits (94), Expect = 0.018, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 21/65 (32%) Query: 10 HLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRE 69 +L L P+ L NG+ ++ ++ A E L+K+ I + Sbjct: 152 YLANEGENLIPICRLVKNGVYISLVKDVRDAFEGSPLVKIDCKGMHASDYKKIGAKLKES 211 Query: 70 TGACN 74 Sbjct: 212 VPCVL 216 >UniRef50_Q9SU76 Putative uncharacterized protein AT4g29750 n=1 Tax=Arabidopsis thaliana RepID=Q9SU76_ARATH Length = 776 Score = 60.4 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ +++ + + + P +LLG + +G + + +H EL+KV + + I Sbjct: 605 ITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQVKHI 664 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR 86 ++ E+G V V G ++LYR Sbjct: 665 AISLEAESGGVLVSVDKTMKGYAIILYR 692 Score = 47.7 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%) Query: 7 QKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAI 66 + + L+ +A + V +GS G+T+ ++ I + E E++K+K + E + Sbjct: 248 ELKRLRNVALRMVERVKVGSAGITQALVEAIHEKWEVDEVVKLKFSEPYSLNMKRTHEVL 307 Query: 67 VRETGACN 74 A Sbjct: 308 ENNLEANP 315 Score = 38.4 bits (89), Expect = 0.075, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL- 61 LS + ++ LA P LG + +G+ + + + K+ I T+ Sbjct: 397 LSNTEMTEMRRLARTSPPHFALGRSRELQGLAKAMVKLWAKSAIAKIAIKRGVENTRNER 456 Query: 62 IVEAIVRETGACNVQVIGKTLVLYRPTK 89 + E + R T V + +V YR + Sbjct: 457 MAEELKRLTRGVLVSRNKEYIVFYRVAE 484 >UniRef50_Q6YYA3 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic n=3 Tax=Poaceae RepID=CRS1_ORYSJ Length = 725 Score = 60.4 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++++ + + + VLLG G+ EGV+ EI Q +H E++KV T Sbjct: 566 LTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQITYT 625 Query: 63 VEAIVRETGACNVQVI----GKTLVLYR 86 + ETG + + ++LYR Sbjct: 626 SMMLEVETGGTLIAIERFTTSHAIILYR 653 Score = 43.8 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 1/86 (1%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEH-HELIKVKIATEDRETKT 60 L + + L+ A + G+T+ V+ E+ EL V+I R Sbjct: 154 ELEAGELERLRRAARGKERWARAKKAGITDEVVEEVRGQWAKGQELAGVRIVEPLRRCMD 213 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 E + +TG V G +YR Sbjct: 214 RAREILEIKTGGLVVWTRGGIHFVYR 239 >UniRef50_A7C1L1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C1L1_9GAMM Length = 67 Score = 60.0 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%) Query: 33 VLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYR 86 +LA+++ LE HELIK++IA D+ + I E + + + A VQ+IG+ +LYR Sbjct: 1 MLAQLDCVLEDHELIKIRIA-ADKAERHKITEELCQASHAELVQIIGRVSILYR 53 >UniRef50_Q9LDA9 CRS2-associated factor 2, chloroplastic n=6 Tax=rosids RepID=CAF2P_ARATH Length = 564 Score = 60.0 bits (145), Expect = 3e-08, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 30/85 (35%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L +K L V LG +G T +L I + + KV+ Sbjct: 202 PLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNN 261 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + + +TG + +G + L+R Sbjct: 262 VCRVLEEKTGGEIIHRVGGVVYLFR 286 Score = 47.3 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 26/72 (36%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ + L+P+ L NG+ ++ ++ A E L+KV + I Sbjct: 321 LTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKI 380 Query: 63 VEAIVRETGACN 74 + Sbjct: 381 GAKLKELVPCVL 392 >UniRef50_D1I019 Whole genome shotgun sequence of line PN40024, scaffold_90.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D1I019_VITVI Length = 343 Score = 59.6 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 5/100 (5%) Query: 2 NLSTKQKQHLKGLAHPLKPV--VLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 LS + L + LG G+T +L +I + E +++K Sbjct: 128 PLSEDEIAELVERYRHSDCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM 187 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYRPT---KERKISLP 96 + + + G + ++LYR + + +P Sbjct: 188 ENVCFHLEDKCGGKIIYRNINIILLYRGRNYDPKNRPVVP 227 Score = 43.4 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 34/84 (40%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ + ++ L PV+ L NG+ V+ + +A E++++ I Sbjct: 249 LTFEETKEMRNRGLNLPPVMKLTKNGVYVNVVERVREAFRSEEVVRLDCTHVGSSDCKRI 308 Query: 63 VEAIVRETGACNVQVIGKTLVLYR 86 + + + ++L++ Sbjct: 309 GVKLRDLVPCVPILFKDEQIILWK 332 >UniRef50_Q9FYT6 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic n=4 Tax=Poaceae RepID=CRS1_MAIZE Length = 715 Score = 58.1 bits (140), Expect = 8e-08, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++K + + + +VLLG G+ +GV+ EI Q +H E++KV Sbjct: 564 LTEEEKIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYA 623 Query: 63 VEAIVRETGACNVQVI----GKTLVLYR 86 + ETG + V ++LYR Sbjct: 624 ASLLEVETGGILIAVEKLTTSHAIILYR 651 Score = 41.5 bits (97), Expect = 0.009, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%) Query: 26 SNGLTEGVLAEIEQALEH-HELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVL 84 G+T+ V+ E+ + EL V+I R + E + +TG V G + Sbjct: 193 KAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDMHFV 252 Query: 85 YRPTK 89 YR +K Sbjct: 253 YRGSK 257 >UniRef50_A9RCK3 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RCK3_PHYPA Length = 590 Score = 56.9 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Query: 2 NLSTKQKQHLKGLA--HPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK 59 L+ K++ L+ A + +G + + G+ I + V + ++T Sbjct: 365 PLTIKERIRLRQEALKQSDPMHINIGKSNMVAGLAKAIRLYFQKQPFAIVGVKGRAKDTP 424 Query: 60 -TLIVEAIVRETGACNVQVIGKTLVLYR 86 I++ + TGA V L+LYR Sbjct: 425 VEEIIQQLEEATGAVLVSREPNKLILYR 452 Score = 51.5 bits (123), Expect = 8e-06, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGS-----NGLTEGVLAEIEQALEHHELIKVKIATEDR 56 +S +++ L ++ +L+G G+ +GV+ + +H EL+KV I Sbjct: 146 QISDEERYMFMKLGLRMRARLLMGKLSSGRRGVFDGVVENMHLHWKHRELVKV-IFKGPI 204 Query: 57 ETKTLIVEAIVRETGACNVQVI----GKTLVLYR 86 + + E+G V ++ G+ ++ YR Sbjct: 205 FEAEQTAKILEMESGGVLVGIVTTTKGQAIIFYR 238 >UniRef50_A9S0V6 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S0V6_PHYPA Length = 512 Score = 55.4 bits (133), Expect = 6e-07, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 43/92 (46%), Gaps = 9/92 (9%) Query: 4 STKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE-----DRET 58 + ++ L+ + +KP +LLG + GV+ + + +L+K+ + +R+ Sbjct: 346 TEEEMYTLRKIGLRMKPYLLLGRREVFSGVIENMHLHWKWRQLVKIIVKKSYFMYRERDD 405 Query: 59 KTLIVEAIVRETGACNVQV----IGKTLVLYR 86 I + E+G V + +G+ +++YR Sbjct: 406 IENIARMLEIESGGVLVGICTIPVGEAIIVYR 437 Score = 43.0 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 3/87 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGS-NGLTEGVLAEIEQALEHHELIKVKIATE-DRETK 59 L+ + ++ LA L P +LG GL EG+ + I + E E+ K+ + R Sbjct: 124 RLTNFEMTEMRHLAKKLPPHFVLGQCRGL-EGLASAIVKLWEKSEVAKIAMKRGVSRIVN 182 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR 86 + ++R TG + + LYR Sbjct: 183 DRMASELIRLTGGDLIARNMSYIALYR 209 >UniRef50_A9S0V5 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S0V5_PHYPA Length = 297 Score = 54.2 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 35/85 (41%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTL 61 L+ + + L G A + + LG +GLT +L + + + + ++K Sbjct: 88 PLTKDEVRELVGRACAERRRLDLGKDGLTHNMLELLHRHWKRRRVCRIKCYGVPTVDMDN 147 Query: 62 IVEAIVRETGACNVQVIGKTLVLYR 86 + I ++G ++ L ++R Sbjct: 148 LCRVIEEKSGGKIIRRSQGMLYVFR 172 Score = 48.4 bits (115), Expect = 7e-05, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 36/87 (41%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 LS K+ +L+ L + + L G+ ++ ++ A E EL+K+ DR + Sbjct: 207 LSEKEADNLRALGRRIHCLCRLERAGVYINLVKMVKDAFEIDELVKIDCRELDRSDMKKV 266 Query: 63 VEAIVRETGACNVQVIGKTLVLYRPTK 89 + + ++L++ ++ Sbjct: 267 GAKLRDLVPCVPLSFERHFMLLWKRSR 293 >UniRef50_B9N252 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N252_POPTR Length = 687 Score = 53.8 bits (129), Expect = 2e-06, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 5/98 (5%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 ++ ++++ + + L+ ++LG G+ EGV+ + Q +H E++KV Sbjct: 528 MTEEERECFRKIGLKLRGSLVLGRRGVFEGVMEGLHQHWKHREVVKVITMQRVFSQVIHT 587 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR-PTKERKISL 95 + E+ V V G +++YR +R + L Sbjct: 588 ATLLEAESDGILVSVDKLKEGHAIIIYRGKNYKRPLRL 625 Score = 47.7 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 2/86 (2%) Query: 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKT 60 ++L + + L+G A ++ V + G+T+ V+ EI EL +K Sbjct: 141 LSLDKELLERLRGEAAKMRTWVKVKKAGVTQSVVDEIRLTWRTSELAMIKFYMPLCRNMN 200 Query: 61 LIVEAIVRETGACNVQVIGKTLVLYR 86 + + TG V V+YR Sbjct: 201 RARDIVE--TGGLVVWTRKDIHVVYR 224 >UniRef50_UPI0001698ED9 hypothetical protein Epers_16139 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698ED9 Length = 52 Score = 53.4 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 47 IKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERK 92 IKVK+A D+ + + AI ++GA VQ+IG+ + YR E+K Sbjct: 1 IKVKLAGADKAEREQLSSAITEQSGAALVQIIGRVAIFYRANPEKK 46 >UniRef50_D1I8L3 Whole genome shotgun sequence of line PN40024, scaffold_35.assembly12x (Fragment) n=6 Tax=Magnoliophyta RepID=D1I8L3_VITVI Length = 331 Score = 53.4 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++ + K V +G G+ +GV+ + + H+ ++V + T E I Sbjct: 43 LTPEEHFFFLKMGLKCKNYVPIGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEI 102 Query: 63 VEAIVRETGACNVQ-VIGKTLVLYR 86 + R TG + T+++YR Sbjct: 103 AVELARLTGGIVLDIHEENTIIMYR 127 >UniRef50_A5B9B9 Putative uncharacterized protein (Fragment) n=1 Tax=Vitis vinifera RepID=A5B9B9_VITVI Length = 371 Score = 53.4 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 25 GSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQV----IGK 80 G G+ +GV+ + Q +H E++KV + + E+G V + G Sbjct: 119 GRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGH 178 Query: 81 TLVLYR-PTKERKISL-PR 97 +++YR R I L P+ Sbjct: 179 AIIIYRGKNYRRPIKLVPK 197 >UniRef50_D2PDV9 Putative uncharacterized protein n=9 Tax=Sulfolobus RepID=D2PDV9_SULIS Length = 97 Score = 53.0 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 45/82 (54%) Query: 5 TKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVE 64 +++ + L + + +G G+TEG+L EI++ L H++IK+KI ++ + + + Sbjct: 3 SQEIKDLIKKTRAERADIRIGKYGVTEGMLNEIKRRLNEHKVIKIKIGIKEIDDRKEFAK 62 Query: 65 AIVRETGACNVQVIGKTLVLYR 86 + GA ++V G T +L + Sbjct: 63 RVAEMVGAKLIEVRGYTFILAK 84 >UniRef50_A8IUV5 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IUV5_CHLRE Length = 321 Score = 52.7 bits (126), Expect = 4e-06, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 13/88 (14%) Query: 20 PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETK-----TLIVEAIVRETGACN 74 P+V LG +GL VL + A + EL+K++I R K T + A+ + TG Sbjct: 137 PLVRLGPSGLNASVLTSVASAWRNSELVKLRI--VSRANKYMPYITQVCAALEQRTGGLV 194 Query: 75 VQVIGKTLVLYR------PTKERKISLP 96 V G ++ L+R + + LP Sbjct: 195 VWRAGGSIWLFRGAGYDAASPSGRPGLP 222 >UniRef50_Q9LF10 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic n=2 Tax=Arabidopsis thaliana RepID=CRS1_ARATH Length = 718 Score = 50.7 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 41/88 (46%), Gaps = 4/88 (4%) Query: 3 LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62 L+ ++++ L+ + + ++LG G+ GV+ + Q +H E+ KV + Sbjct: 570 LTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSRVVYT 629 Query: 63 VEAIVRETGACNVQV----IGKTLVLYR 86 +A+ E+ + + G +++YR Sbjct: 630 AKALETESNGVLISIEKLKEGHAILIYR 657 Score = 39.6 bits (92), Expect = 0.031, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%) Query: 10 HLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRE 69 L+ A ++ V + G+TE V+ +I+ + +EL V+ E I Sbjct: 214 RLRREASKMRKWVNVRKAGVTELVVNKIKSMWKLNELAMVRFDVPLCRNMERAQEIIE-- 271 Query: 70 TGACNVQVIGKTLVLYR 86 TG V + LV+YR Sbjct: 272 TGGLVVLSKKEFLVVYR 288 Score = 38.8 bits (90), Expect = 0.060, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 3/87 (3%) Query: 2 NLSTKQKQHLKGLAHPLKPVVLLGSN-GLTEGVLAEIEQALEHHELIKVKIA-TEDRETK 59 L+ ++ +L+ +A PL +LG N GL +G+ + I + E + K+ I Sbjct: 358 KLTDEELTYLRNIAQPLPFHFVLGRNYGL-QGLASAIVKLWEKCIIAKIAIKWGALNTNN 416 Query: 60 TLIVEAIVRETGACNVQVIGKTLVLYR 86 + + + TG + +VLYR Sbjct: 417 EEMADELRYLTGGVLILRNKYLIVLYR 443 >UniRef50_B5IFI5 CRS1 / YhbY domain superfamily n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFI5_9EURY Length = 73 Score = 49.2 bits (117), Expect = 5e-05, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Query: 16 HPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATE-DRETKTLIVEAIVRETGACN 74 +K V +G G+T+GV EI++ L+ ++IK+K DRE T +E + ++ A Sbjct: 1 MDIKATVQIGKGGITDGVKREIKEQLKKRKIIKIKFLQNADRENFTEKIEKLAKDVNAEI 60 Query: 75 VQVIGKTLVLYRP 87 +++ G T VL + Sbjct: 61 LEIRGFTAVLKKR 73 >UniRef50_A8IV56 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IV56_CHLRE Length = 888 Score = 41.9 bits (98), Expect = 0.007, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 2 NLSTKQKQHLKGLAHPLK-----PVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDR 56 L + L A L V +G GLT GVLA+ + LE HEL+ + Sbjct: 144 PLHPRAAAELWRAAEALAGSGRMVRVAVGRQGLTRGVLAQAGELLEVHELL--YLLPNCS 201 Query: 57 ETKTLIVEAIVRETGACNVQVIGKTLVL 84 + ++ G+T+ L Sbjct: 202 LEVGFVGWVAEAALDCVVLRTKGRTVTL 229 >UniRef50_B5Y593 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y593_PHATR Length = 386 Score = 41.1 bits (96), Expect = 0.011, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 29 LTEGVLAEIEQALEHHELIKVKIATEDRETKTL--IVEAIVRETGACNVQVIGKTLVLYR 86 L + ++ L ELI +++ ++ K + I E A Q +G T++LYR Sbjct: 295 LQPEWMEALDDILWKEELICIRLNKAVKKKKEAKVLGTRIAAELTAHVAQTVGHTVLLYR 354 Query: 87 P 87 P Sbjct: 355 P 355 >UniRef50_B5Y4T8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y4T8_PHATR Length = 192 Score = 39.9 bits (93), Expect = 0.024, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 16/105 (15%) Query: 2 NLSTKQKQHLKGL------AHPLKPVVLLGSNGLTE---GVLAEIEQALEHHELIKVK-I 51 +L+T Q + L+ ++ L V L + I L EL++V+ I Sbjct: 55 SLTTNQIKMLRKEMNKREASNQLSQVFLSADESFGPFSLETVQSIVAELTEQELVEVRGI 114 Query: 52 ATEDRETKTLIVEAIVRETGAC------NVQVIGKTLVLYRPTKE 90 + + + E + E G VQ+ G LYRP+++ Sbjct: 115 SRDRKRAVKTTSERLALELGMESGKNVSIVQIKGHAATLYRPSED 159 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.187 0.558 Lambda K H 0.267 0.0576 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 793,976,818 Number of Sequences: 3077464 Number of extensions: 36720721 Number of successful extensions: 97811 Number of sequences better than 1.0e-01: 190 Number of HSP's better than 0.1 without gapping: 445 Number of HSP's successfully gapped in prelim test: 50 Number of HSP's that attempted gapping in prelim test: 97095 Number of HSP's gapped (non-prelim): 594 length of query: 97 length of database: 1,040,396,356 effective HSP length: 66 effective length of query: 31 effective length of database: 837,283,732 effective search space: 25955795692 effective search space used: 25955795692 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 88 (38.0 bits)