48 c3polA_ Probab=99.89   E-value=6.4e-21  Score=139.48  Aligned_columns=231  Identities=14%

Q ss_pred             CCCEEEEEECCCCCC-CCCCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCC-CCEEEECCCCC
Q ss_conf             884369997698870-2179997110037738759899989985899789999289889999973018-81999768878
Q batch____         3 NNAMSVVILAAGKGT-RMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDD-NLNWVLQAEQL   80 (456)
Q Consensus         3 ~~~~~avila~G~g~-rl~p~~pK~llPi~n~plI~~~l~~l~~~g~~~i~iv~~~~~~~i~~~l~~~-~i~~i~~~~~~   80 (456)
                      +..|+|||++||.|+ ||.   ||||+||+|+|||+|+++.|.++|+.+.++++.+..+......... ++.+..++...
T Consensus         7 ~~~~~~vIi~A~~~s~Rl~---~K~Ll~v~Gkpli~~~i~~l~~~~~~~~iiVv~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (262)
T c3polA_           7 DKHMKHIVIPARFSSSRLP---GKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRAEGVDVVLTSADHPS   83 (262)
T ss_dssp             TCCCEEEEEECCSCCTTST---TGGGSEETTEEHHHHHHHHHTTCCSCSEEEEEESCHHHHHHHHTTTCEEEECCSCCCC
T ss_pred             HCCCEEEEEECCCCCCCCC---CCEEEEECCEEHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf             0887599994487788998---7114436856579999999984899828999769588899997539949996488765


Q ss_pred             CHHHHHHHHHHHCC-CCCCEEEEECCEEEECHHHHHHHHHHHHHCC---EEEEEEECCCCCEEE------EEECCCCEEE
Q ss_conf             84899999998658-9883999349856338999999999998678---389999778871534------6640896399
Q batch____        81 GTGHAMQQAAPFFA-DDEDILMLYGDVPLISVETLQRLRDAKPQGG---IGLLTVKLDDPTGYG------RITRENGKVT  150 (456)
Q Consensus        81 gt~~al~~~~~~i~-~~~~~lv~~~D~~~i~~~~l~~~~~~~~~~~---~~i~~~~~~~~~~~~------~~~~~~~~v~  150 (456)
                      ++..++..+..... ..+.++++.||.+++++..+..+++.+.+..   .........++..+.      .....++.+.
T Consensus        84 ~~~~~~~~~~~~~~~~~d~~~~~~~d~p~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  163 (262)
T c3polA_          84 GTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEAL  163 (262)
T ss_dssp             HHHHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSCEEEECSSSBEE
T ss_pred             CHHHHHHHHHHHCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHCCCCCCEEEEECCCCCEE
T ss_conf             12689999985004689889998289533359999999999997699357564454048767067771289986899587


Q ss_pred             EEEEECCCCCCCCC---------CEEEECCEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHH--HHCCCCEEEEECCC
Q ss_conf             99980678822111---------01565117886699998887873357866735258889999--98899389998378
Q batch____       151 GIVEHKDATDEQRQ---------IQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALA--YQEGREIVAVHPQR  219 (456)
Q Consensus       151 ~~~e~~~~~~~~~~---------~~~~~~g~y~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~l--~~~~~~v~~~~~~~  219 (456)
                      .+...+........         ..+.++++|.|....+..+.     ...++++...+.+..+  ++.|.++..+..+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~e~~~~~~~l~~i~~g~~v~~~~~~~  238 (262)
T c3polA_         164 YFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYV-----TWEMGKLEKLESLEQLRVLENGHRIAIAVAEA  238 (262)
T ss_dssp             EEESSCCSCCSSSSSSSSCCCCSCCEEEEEEEEEEHHHHHHHT-----TSCCCHHHHHHTCTTHHHHHTTCCEEEEECSS
T ss_pred             EEECCCCCCCCCCCHHHHHHCCCHHHHHCCHHHHHHHHHHHHH-----HCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             7302344222221012322012101211121332299999876-----04876201344577899996898069998162


Q ss_pred             C-EEEECCCCHHHHHHHHHHHHHHC
Q ss_conf             2-26404489999988555643200
Q batch____       220 L-SEVEGVNNRLQLSRLERVYQSEQ  243 (456)
Q Consensus       220 ~-~~~~~~~~~~~l~~~~~~~~~~~  243 (456)
                      . |.  .++++.||..+..++...+
T Consensus       239 ~~~~--dIdtpeDL~~ae~l~~~~~  261 (262)
T c3polA_         239 NLPP--GVDTQADLDRLNNMPVESF  261 (262)
T ss_dssp             CCCC--CCCSHHHHHHHHTSCGGGG
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHC
T ss_conf             0200--6889999999999953106