Phyre 2 alignment of P77519 with c3p0sA_

Return to main results | Retrieve Phyre Job Id

Job Description | P77519
Confidence | 0.70% | Date | Thu Jan 5 12:30:12 GMT 2012
Rank | 59 | Aligned Residues | 21
% Identity | 33% | Template | c3p0sA_
PDB info | PDB header:virus | Chain: A: PDB Molecule:capsid protein vp; | PDBTitle: crystal structure of bombyx mori densovirus 1 capsid
Resolution | 3.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 66 | . | . | . | 70 | . | . | . | . | . | . |  | . | . | . | 80 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | I | N | D | Q | M | I | G | F | G | H | . | W | E | Y | D | F | K | G | Y | N | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | I | K | N | G | T | T | A | Y | G | K | C | W | E | K | R | F | K | P | T | N | G
Template Known Secondary structure |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions