18/01/2012 08:44:53 : INFO  : Run start: Wed Jan 18 08:44:51 GMT 2012
18/01/2012 08:45:05 : INFO  : Initialised job
18/01/2012 08:45:08 : INFO  : Renaming log file 'phyre2_20120118_084450.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/7a3e5e5438b12715/phyre_20120118_084450.log'
18/01/2012 08:45:11 : INFO  : Initialised job:
Sequence
>batch____
MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLG
FKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL

18/01/2012 08:45:13 : INFO  : Checked sequence
18/01/2012 08:45:20 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 08:45:23 : INFO  : PSI-BLAST 3 iterations
18/01/2012 08:46:13 : INFO  : PSI-BLAST 5 iterations
18/01/2012 08:47:15 : INFO  : Finished PSI-BLAST
18/01/2012 08:47:22 : INFO  : Running Buildali to generate a3m file
18/01/2012 08:54:17 : INFO  : Converting to HMM
18/01/2012 08:54:22 : INFO  : Calibrating HMM
18/01/2012 08:54:43 : INFO  : Searching HMM database
18/01/2012 08:57:09 : INFO  : Finished buildali
18/01/2012 08:57:13 : INFO  : Predicting secondary structure
18/01/2012 08:57:32 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 08:57:36 : INFO  : Predicting Disordered regions
18/01/2012 08:57:46 : INFO  : Predicted Disorder (Disopred)
18/01/2012 08:57:50 : INFO  : Running memsat_svm check
18/01/2012 09:02:01 : INFO  : Running memsat_svm full
18/01/2012 09:11:34 : INFO  : Predicted Transmembrane (memsat_svm) ID '7a3e5e5438b12715'
18/01/2012 09:11:38 : INFO  : Initialising fold library search
18/01/2012 09:11:45 : INFO  : Initialised search input
18/01/2012 09:11:51 : INFO  : Building Ensemble models
18/01/2012 09:11:59 : INFO  : Building hh.d1osma_.model.1.pdb
18/01/2012 09:12:35 : INFO  : Building hh.d1phoa_.model.2.pdb
18/01/2012 09:13:04 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/7a3e5e5438b12715/hh.d1phoa_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/7a3e5e5438b12715/d1phoa_.2.pdb
18/01/2012 09:13:13 : INFO  : Building hh.d2zfga1.model.3.pdb
18/01/2012 09:13:41 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/7a3e5e5438b12715/hh.d2zfga1.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/7a3e5e5438b12715/d2zfga1.4.pdb
18/01/2012 09:13:50 : INFO  : Building hh.d2jnaa1.model.4.pdb
18/01/2012 09:14:18 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/7a3e5e5438b12715/hh.d2jnaa1.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/7a3e5e5438b12715/d2jnaa1.11.pdb
18/01/2012 09:14:28 : INFO  : Building d1osma_.1.pdb
18/01/2012 09:15:01 : INFO  : Building d1phoa_.2.pdb
18/01/2012 09:15:35 : INFO  : Building c3nsgA_.3.pdb
18/01/2012 09:16:09 : INFO  : Building d2zfga1.4.pdb
18/01/2012 09:16:43 : INFO  : Building d2fgqx1.5.pdb
18/01/2012 09:17:17 : INFO  : Building c3a2rX_.6.pdb
18/01/2012 09:17:52 : INFO  : Building d3prna_.7.pdb
18/01/2012 09:18:26 : INFO  : Building d2pora_.8.pdb
18/01/2012 09:18:58 : INFO  : Building c2o4vA_.9.pdb
18/01/2012 09:19:32 : INFO  : Building c2iwvD_.10.pdb
18/01/2012 09:20:05 : INFO  : Building d2jnaa1.11.pdb
18/01/2012 09:20:38 : INFO  : Building d1uynx_.12.pdb
18/01/2012 09:21:12 : INFO  : Building c2wjqA_.13.pdb
18/01/2012 09:21:47 : INFO  : Building c2vdaB_.14.pdb
18/01/2012 09:22:20 : INFO  : Building c2jwyA_.15.pdb
18/01/2012 09:22:54 : INFO  : Building c3kvnA_.16.pdb
18/01/2012 09:23:28 : INFO  : Building c2kjoA_.17.pdb
18/01/2012 09:24:03 : INFO  : Building c2k3aA_.18.pdb
18/01/2012 09:24:37 : INFO  : Building d2noca1.19.pdb
18/01/2012 09:25:12 : INFO  : Building c2jubA_.20.pdb
18/01/2012 09:28:10 : INFO  : Finished HH model building
18/01/2012 09:28:13 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 09:29:39 : INFO  : html domain output complete ID '7a3e5e5438b12715'
18/01/2012 09:39:58 : INFO  : Run end  : Wed Jan 18 09:39:56 GMT 2012
