27/01/2012 20:05:07 : INFO  : Run start: Fri Jan 27 20:05:06 GMT 2012
27/01/2012 20:05:08 : INFO  : Initialised job
27/01/2012 20:05:09 : INFO  : Renaming log file 'phyre2_20120127_200506.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/7a3654253219747a/phyre_20120127_200506.log'
27/01/2012 20:05:09 : INFO  : Initialised job:
Sequence
>batch____
MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIP
QLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGI
RGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDL
AAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDL
GVFRSATQKLADTFKK

27/01/2012 20:05:10 : INFO  : Checked sequence
27/01/2012 20:05:11 : INFO  : Finding homologues with PSI-BLAST
27/01/2012 20:05:11 : INFO  : PSI-BLAST 3 iterations
27/01/2012 20:06:44 : INFO  : PSI-BLAST 5 iterations
27/01/2012 20:08:49 : INFO  : Finished PSI-BLAST
27/01/2012 20:08:49 : INFO  : Running Buildali to generate a3m file
27/01/2012 20:15:50 : INFO  : Converting to HMM
27/01/2012 20:15:52 : INFO  : Calibrating HMM
27/01/2012 20:16:01 : INFO  : Searching HMM database
27/01/2012 20:22:09 : INFO  : Finished buildali
27/01/2012 20:22:09 : INFO  : Predicting secondary structure
27/01/2012 20:22:11 : INFO  : Predicted secondary structure (PSI-Pred)
27/01/2012 20:22:11 : INFO  : Predicting Disordered regions
27/01/2012 20:22:12 : INFO  : Predicted Disorder (Disopred)
27/01/2012 20:22:12 : INFO  : Running memsat_svm check
27/01/2012 20:24:01 : INFO  : Globular protein
27/01/2012 20:24:01 : INFO  : Predicted Transmembrane (memsat_svm) ID '7a3654253219747a'
27/01/2012 20:24:02 : INFO  : Initialising fold library search
27/01/2012 20:24:02 : INFO  : Initialised search input
27/01/2012 20:24:03 : INFO  : Building Ensemble models
27/01/2012 20:24:04 : INFO  : Building hh.d1dxea_.model.1.pdb
27/01/2012 20:24:07 : INFO  : Building d1dxea_.1.pdb
27/01/2012 20:24:10 : INFO  : Building c2vwtA_.2.pdb
27/01/2012 20:24:14 : INFO  : Building c2v5jB_.3.pdb
27/01/2012 20:24:17 : INFO  : Building c1izcA_.4.pdb
27/01/2012 20:24:20 : INFO  : Building d1izca_.5.pdb
27/01/2012 20:24:25 : INFO  : Building c3qz6A_.6.pdb
27/01/2012 20:24:28 : INFO  : Building c1sgjB_.7.pdb
27/01/2012 20:24:31 : INFO  : Building d1sgja_.8.pdb
27/01/2012 20:24:34 : INFO  : Building d1u5ha_.9.pdb
27/01/2012 20:24:37 : INFO  : Building c1u5vA_.10.pdb
27/01/2012 20:24:40 : INFO  : Building d1e0ta2.11.pdb
27/01/2012 20:24:45 : INFO  : Building c3qqwC_.12.pdb
27/01/2012 20:24:48 : INFO  : Building c3qllB_.13.pdb
27/01/2012 20:24:51 : INFO  : Building c3r4iB_.14.pdb
27/01/2012 20:24:55 : INFO  : Building d1liua2.15.pdb
27/01/2012 20:24:59 : INFO  : Building d1pkla2.16.pdb
27/01/2012 20:25:03 : INFO  : Building d1a3xa2.17.pdb
27/01/2012 20:25:10 : INFO  : Building d2g50a2.18.pdb
27/01/2012 20:25:16 : INFO  : Building c3pugA_.19.pdb
27/01/2012 20:25:19 : INFO  : Building c2hroA_.20.pdb
27/01/2012 20:25:27 : INFO  : Finished HH model building
27/01/2012 20:25:28 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
27/01/2012 20:25:59 : INFO  : html domain output complete ID '7a3654253219747a'
27/01/2012 21:14:29 : INFO  : Run end  : Fri Jan 27 21:14:29 GMT 2012
