Phyre 2 alignment of P23522 with c3rlhA_

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Job Description | P23522
Confidence | 36.12% | Date | Wed Jan 25 15:20:43 GMT 2012
Rank | 381 | Aligned Residues | 50
% Identity | 10% | Template | c3rlhA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:sphingomyelin phosphodiesterase d lisictox-alphaia1a; | PDBTitle: crystal structure of a class ii phospholipase d from loxosceles2 intermedia venom
Resolution | 1.72 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |  | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | L | G | N | A | S | H | P | D | V | Q | K | A | I | Q | H | I | F | N | R | A | S | A | H | G | K | P | S | G | I | L | A | . | P | V | E | A | D | A | R | R | Y | L | E | W | G | A | T | F | V | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | N | C | L | P | R | G | L | S | R | V | N | A | A | V | A | N | R | D | S | A | N | G | F | I | N | K | V | Y | Y | W | T | V | D | K | R | S | T | T | R | D | A | L | D | A | G | V | D | G | I | M
Template Known Secondary structure |  |  | T | T | S |  |  |  | S |  |  |  |  |  |  |  |  |  |  | T | S | T | T |  |  |  | S |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  | T |  | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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