BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (560 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=... 631 e-179 UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9... 606 e-172 UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 Re... 520 e-146 UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_E... 519 e-145 UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwini... 502 e-140 UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LI... 496 e-138 UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA 483 e-135 UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473... 470 e-131 UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LI... 430 e-119 UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIG... 426 e-117 UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens... 376 e-102 UniRef50_D2U3F9 NAD-dependent DNA ligase LigB n=1 Tax=Arsenophon... 345 2e-93 UniRef50_B2PUQ1 Putative uncharacterized protein n=1 Tax=Provide... 345 3e-93 UniRef50_D1P0P2 NAD-dependent DNA ligase adenylation domain prot... 338 4e-91 UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Provide... 332 2e-89 UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A ... 157 7e-37 UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DN... 138 6e-31 UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 136 2e-30 UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN 136 2e-30 UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolytic... 135 3e-30 UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_... 133 2e-29 UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH 131 8e-29 UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_T... 129 2e-28 UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=D... 129 2e-28 UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter pisco... 129 3e-28 UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=... 129 4e-28 UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanoba... 127 8e-28 UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD 127 1e-27 UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_H... 127 1e-27 UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowsto... 127 1e-27 UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_L... 127 2e-27 UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-... 126 2e-27 UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP 125 3e-27 UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI 125 5e-27 UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans D... 125 5e-27 UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC ... 124 9e-27 UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (... 124 1e-26 UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Clo... 124 1e-26 UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 122 4e-26 UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT 121 7e-26 UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 121 8e-26 UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID... 120 1e-25 UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNL... 120 1e-25 UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 120 2e-25 UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma h... 119 3e-25 UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNL... 119 3e-25 UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB 119 3e-25 UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 118 5e-25 UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 118 5e-25 UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 118 7e-25 UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD 118 8e-25 UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA 117 1e-24 UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNL... 117 1e-24 UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolic... 117 1e-24 UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subs... 116 2e-24 UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongi... 116 2e-24 UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum ... 115 3e-24 UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV 115 3e-24 UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3... 115 3e-24 UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE 115 4e-24 UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_S... 115 4e-24 UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3... 115 5e-24 UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriac... 115 5e-24 UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB 115 5e-24 UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4... 115 6e-24 UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobi... 114 8e-24 UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO 114 1e-23 UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus ... 114 1e-23 UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella mu... 114 1e-23 UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=... 114 1e-23 UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9... 113 2e-23 UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU 113 2e-23 UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepI... 113 2e-23 UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin42... 113 2e-23 UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidan... 113 2e-23 UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=... 113 2e-23 UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 113 2e-23 UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATC... 113 2e-23 UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 112 3e-23 UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachl... 111 7e-23 UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 111 8e-23 UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepI... 111 8e-23 UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR 111 9e-23 UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH 111 9e-23 UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostri... 110 1e-22 UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriac... 110 1e-22 UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL 110 1e-22 UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 ... 110 2e-22 UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 Re... 110 2e-22 UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetac... 110 2e-22 UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_L... 110 2e-22 UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=D... 109 2e-22 UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacterace... 109 2e-22 UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 108 4e-22 UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata ... 108 6e-22 UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invi... 108 7e-22 UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria... 108 8e-22 UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT 107 9e-22 UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ... 107 1e-21 UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW 107 1e-21 UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicu... 107 1e-21 UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 107 2e-21 UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT 106 2e-21 UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepI... 106 2e-21 UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1... 106 2e-21 UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN 106 2e-21 UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM... 105 3e-21 UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defen... 105 4e-21 UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate divi... 105 4e-21 UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepI... 105 4e-21 UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS 105 5e-21 UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNL... 105 5e-21 UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD 104 7e-21 UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI 104 7e-21 UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ... 104 8e-21 UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL 104 9e-21 UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 Re... 104 9e-21 UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA 104 9e-21 UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 1436... 104 1e-20 UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactoly... 103 1e-20 UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN 103 1e-20 UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD 103 1e-20 UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_E... 103 2e-20 UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 Rep... 103 2e-20 UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus... 103 2e-20 UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Mori... 102 3e-20 UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN 102 4e-20 UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV... 102 4e-20 UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DN... 102 4e-20 UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipe... 101 6e-20 UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM 101 6e-20 UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttle... 101 8e-20 UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE 101 8e-20 UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia florid... 101 8e-20 UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 ... 100 1e-19 UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amo... 100 2e-19 UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=... 100 2e-19 UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC ... 100 3e-19 UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DN... 100 3e-19 UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexib... 99 5e-19 UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=... 99 5e-19 UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobact... 98 7e-19 UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNL... 98 8e-19 UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_... 98 8e-19 UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT 98 8e-19 UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia en... 98 9e-19 UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus Re... 98 9e-19 UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium... 98 1e-18 UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 206... 97 1e-18 UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS 97 2e-18 UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF 97 2e-18 UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 23... 97 2e-18 UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocan... 96 3e-18 UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB 96 4e-18 UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis... 96 5e-18 UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG 96 5e-18 UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DN... 96 5e-18 UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 5... 95 7e-18 UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DN... 95 7e-18 UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM ... 95 7e-18 UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DN... 94 1e-17 UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_... 94 1e-17 UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XG... 94 2e-17 UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL 93 2e-17 UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL 93 3e-17 UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL 93 3e-17 UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_A... 93 3e-17 UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB 93 4e-17 UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI 92 4e-17 UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bactero... 92 4e-17 UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ... 92 4e-17 UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNL... 92 5e-17 UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_A... 92 6e-17 UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis p... 91 9e-17 UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured orga... 91 1e-16 UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 ... 90 3e-16 UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ... 88 7e-16 UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP 88 8e-16 UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATC... 88 9e-16 UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subs... 88 1e-15 UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas f... 88 1e-15 UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 Re... 87 2e-15 UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_... 86 4e-15 UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ 86 4e-15 UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA 86 4e-15 UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacte... 86 4e-15 UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW 85 8e-15 UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepI... 85 9e-15 UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthos... 85 9e-15 UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 84 1e-14 UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepI... 84 1e-14 UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DN... 84 1e-14 UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 83 2e-14 UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=... 83 3e-14 UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_H... 83 3e-14 UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudo... 82 4e-14 UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 84... 82 5e-14 UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris ... 82 5e-14 UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNL... 82 7e-14 UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuri... 82 8e-14 UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCM... 81 9e-14 UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Sipho... 81 1e-13 UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ... 80 2e-13 UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_A... 80 2e-13 UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 Rep... 80 2e-13 UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA 80 3e-13 UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 79 4e-13 UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1B... 79 7e-13 UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli Re... 78 9e-13 UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE 77 2e-12 UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetale... 76 4e-12 UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID... 75 5e-12 UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens ... 75 5e-12 UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminoc... 75 5e-12 UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia... 75 5e-12 UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4... 75 6e-12 UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 20... 74 2e-11 UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 74 2e-11 UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate ir... 72 7e-11 UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L... 72 8e-11 UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNL... 71 1e-10 UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=... 69 4e-10 UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminoc... 69 7e-10 UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM 67 2e-09 UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 42... 66 4e-09 UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyoste... 65 6e-09 UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 64 2e-08 UniRef50_Q7R767 DNA ligase, NAD-dependent, putative (Fragment) n... 63 3e-08 UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2... 62 5e-08 UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_S... 61 1e-07 UniRef50_A2BXE3 NAD-dependent DNA ligase N-terminus n=8 Tax=Proc... 60 2e-07 UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp.... 59 5e-07 UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 ... 58 7e-07 UniRef50_A3PEJ6 NAD-dependent DNA ligase N-terminus n=4 Tax=Proc... 57 2e-06 UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation do... 57 2e-06 UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninog... 56 3e-06 UniRef50_B6K9G1 NAD-dependent DNA ligase OB-fold domain containi... 52 4e-05 UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivi... 52 8e-05 UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acid... 52 9e-05 UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornu... 51 1e-04 UniRef50_Q9EMK7 AMV199 n=1 Tax=Amsacta moorei entomopoxvirus 'L'... 51 1e-04 UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNL... 50 2e-04 UniRef50_B3FJJ2 Putative DNA ligase n=1 Tax=Pseudomonas phage 20... 50 3e-04 UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP 50 3e-04 UniRef50_C0BKC6 DNA ligase (NAD(+)) n=1 Tax=Flavobacteria bacter... 46 0.004 UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius ok... 45 0.005 UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepI... 45 0.005 UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID... 44 0.016 UniRef50_B2ZXT5 NAD-dependent DNA ligase n=1 Tax=Ralstonia phage... 44 0.022 UniRef50_A8JFJ7 Predicted protein n=1 Tax=Chlamydomonas reinhard... 42 0.051 >UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=LIGB_KLEP7 Length = 564 Score = 631 bits (1627), Expect = e-179, Method: Compositional matrix adjust. Identities = 298/551 (54%), Positives = 396/551 (71%), Gaps = 1/551 (0%) Query: 9 IGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARL 68 + + + +S A CP W AR ++E SRL QQI W + YW++G S V D VYDQL+ RL Sbjct: 14 LALGMFSASALATCPDWPLARGRQETSRLHQQIVAWKEAYWRQGASGVSDDVYDQLTLRL 73 Query: 69 TQWQRCF-GSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDG 127 QW++CF G+ P D +PP G HPVAHTGVRK+ D+++++ WM+ +SDLW+QPKVDG Sbjct: 74 AQWRQCFPGATPEDDDLPPPTGDARHPVAHTGVRKLADEDSVARWMKNKSDLWIQPKVDG 133 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 VAVTLVYR G+L +AISRG+GL+GE WT + I A+ + ++G LA+S LQGE+FL+R+G Sbjct: 134 VAVTLVYRQGRLVQAISRGDGLRGEAWTARARQIPALAKVMTGELADSVLQGELFLRRDG 193 Query: 188 HIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLT 247 H+QQQ GG+NARAKVAGLMMR D + L+ L VF+WAWPDGP M R + LA AGF + Sbjct: 194 HVQQQTGGMNARAKVAGLMMRADAAAALSQLDVFIWAWPDGPSDMRRRQQLLAQAGFKYS 253 Query: 248 QTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQP 307 YT V ++VA+ R W+++ LPFV+DGV+VR +EP R W PG+ EWL AWKY P Sbjct: 254 GQYTHPVSRIEQVAQWRQRWYRSPLPFVSDGVIVREGREPPGRVWSPGKGEWLAAWKYPP 313 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 ++V +V+AI+F++G+SG+++VVA L P LDDK+VQRVN+GSV RWQ DI GDQ+ + Sbjct: 314 ASRVMQVRAIRFSIGRSGRLNVVAELEPQRLDDKRVQRVNVGSVSRWQMLDIGVGDQLQI 373 Query: 368 SLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLG 427 SLAGQGIPR+D VVWR AER KPTPP +FN+LTCYFA+ C EQF+SRL+WL +K L Sbjct: 374 SLAGQGIPRVDAVVWRTAERHKPTPPPAKFNALTCYFATPECSEQFLSRLIWLSSKSALN 433 Query: 428 LDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTR 487 +DG+GE WR + Q + HIFSWL LT EQLQ PGI+ ++ LWHQF+L RK+PF R Sbjct: 434 VDGVGENLWRVIQQQNPMTHIFSWLALTVEQLQAVPGISAARGQHLWHQFDLVRKRPFIR 493 Query: 488 WVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLG 547 WV+AMGIP+ + AL + +W L +E W+ LPG G RARQ++ + + + L Sbjct: 494 WVLAMGIPVPQGALAQLESENWHLLAAKSEAQWRTLPGVGEIRARQLVAFLHHPDVVALA 553 Query: 548 SWLAAQQITGF 558 WL+ Q+I GF Sbjct: 554 QWLSGQRIPGF 564 >UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9Y3A9_CROTZ Length = 550 Score = 606 bits (1562), Expect = e-172, Method: Compositional matrix adjust. Identities = 288/543 (53%), Positives = 381/543 (70%), Gaps = 1/543 (0%) Query: 17 SVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 S +A CP W+ +A++E++ L+ Q+ +WD+ YW G++ V D VYD + RL W+ CF Sbjct: 5 SAYASCPGWTSEQARQEVAALESQLARWDEAYWLRGENNVSDAVYDGMRQRLNVWKTCFS 64 Query: 77 SEPRDVMMPPLN-GAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYR 135 PP+ G HPVAHTGV+K+ D +LS WM ++DLWVQPKVDGVAV+LVYR Sbjct: 65 LATVSAAPPPVAAGRTHHPVAHTGVQKLKDAASLSQWMHGKTDLWVQPKVDGVAVSLVYR 124 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 G+L + ISRG+GL+GEDWT + I A+P V G LA+S LQGE+FL+REGH QQQ GG Sbjct: 125 KGELRQVISRGDGLQGEDWTARARHIPAIPLQVKGELADSVLQGELFLRREGHHQQQDGG 184 Query: 196 INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK 255 INARA+VAG MMR S LN L +F+WAWPDGP+ M RL LA GF L + +++ V Sbjct: 185 INARAQVAGAMMRNTASPLLNDLDLFIWAWPDGPKEMETRLTILAQGGFPLARAWSQPVS 244 Query: 256 NADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVK 315 + +V R R +W++ LPFVTDGVV+R A+EP + W PG+ W+ AWKY PV QV EV Sbjct: 245 SVADVTRWRKQWFREPLPFVTDGVVIREAREPPGKSWRPGEGSWVAAWKYPPVKQVTEVN 304 Query: 316 AIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIP 375 A++FAVG++GKISVVA L P+ LDDK+V +V+IGS+ RW++ D+A GD++ VSLAGQGIP Sbjct: 305 ALRFAVGRTGKISVVAQLEPITLDDKQVSKVSIGSLTRWEKLDLAEGDEVEVSLAGQGIP 364 Query: 376 RIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG 435 R+D VVWR A+R+KP PP RF++L+C FA+ C+EQFISRLVWL K V L G+GEA Sbjct: 365 RLDAVVWRPAKRSKPAPPAARFDALSCLFATGACEEQFISRLVWLSGKPVFDLAGMGEAT 424 Query: 436 WRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 WR L HRFEH+FSWL L+ + L+ TPG + ++ +LWHQFNL R+ PF RWV A+G+P Sbjct: 425 WRQLSSRHRFEHLFSWLALSVDALKQTPGFSAPRATRLWHQFNLTRQLPFQRWVKALGLP 484 Query: 496 LTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 L A A + +W QL E+ WQ LPG G+ RARQ++ + + + L WL Q+I Sbjct: 485 LPARAWQALADDTWHQLQMRDERSWQTLPGVGAERARQLVNYIHHPDVAALAQWLVEQKI 544 Query: 556 TGF 558 GF Sbjct: 545 DGF 547 >UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S0P4_SEROD Length = 567 Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust. Identities = 259/563 (46%), Positives = 366/563 (65%), Gaps = 10/563 (1%) Query: 1 MKVWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV 60 ++V M +L G++ + CPAW P R Q EI+ L+ Q+++WD Y+++G S +ED V Sbjct: 6 IRVGMTLLGGLMFCGALRAESCPAWRPERLQLEITALKNQLERWDVAYYQQGDSLIEDQV 65 Query: 61 YDQLSARLTQWQRCFG----SEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRER 116 YD L +L W RC G EP ++ G HPVAHTG+ K+ D A+ W+R R Sbjct: 66 YDSLRQKLQLWHRCAGLERVEEPSSLLP---AGKTPHPVAHTGLHKLADPAAVDQWLRGR 122 Query: 117 SDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST 176 SD+WVQPKVDGVA+TLVYRDG+L A+SRGNGL+GE+W +KV I A+P V A Sbjct: 123 SDVWVQPKVDGVAITLVYRDGELAAAVSRGNGLQGENWLEKVRAIPAIPAAVKDAPATLI 182 Query: 177 LQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRL 236 LQGE+FL GH Q+ GGINAR+ VAG +M+ S L +G+FVWAWPDGP+ M+ RL Sbjct: 183 LQGELFLMVNGHQQKIHGGINARSTVAGALMKNRLSPVLQQIGLFVWAWPDGPKEMTQRL 242 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQ 296 ++LA GF L Y++ V + D+V + R W++ LPFVTDGVV+ A+ P+ R+W Sbjct: 243 QQLAAMGFPLALAYSQPVSSLDDVRQWRERWYREALPFVTDGVVIHQARSPQGRYWQAKP 302 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 +W VAWKY PV QVA V ++F+VG++GKI+VV L P+ +DDK V RVN+GS+ RW++ Sbjct: 303 GDWAVAWKYPPVQQVARVNDVEFSVGRTGKIAVVLKLDPLRMDDKWVSRVNLGSLPRWRQ 362 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPT-PPENRFNSLTCYFASDVCQEQFIS 415 W + PGDQ+ +SL G GIPR+D V WR ER +P+ P +R+++L+C+ C++QF++ Sbjct: 363 WAVVPGDQVAISLMGNGIPRLDKVAWRTTERIEPSAPAADRYHALSCFTWLPECRQQFLA 422 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWH 475 RLVWLG Q LGL G+ E+ W+ L H+ WL+LTPEQL + PGI + + Sbjct: 423 RLVWLGGPQGLGLHGVSESTWQVLIDQGLVRHLLDWLVLTPEQLMSAPGIGDKRGRSIHR 482 Query: 476 QFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVI 535 QF LAR+QPF RW++A+G+PL+ A +SW Q+ W+++ G G+ +A Q+ Sbjct: 483 QFQLARQQPFARWLIALGVPLSLQQTQAL--KSWHQIRQLPVGEWRKMTGIGAKKAEQIT 540 Query: 536 EWKENAQIKKLGSWLAAQQITGF 558 + ++ L S L AQ+ITGF Sbjct: 541 GFLQHPPFLTLVSTLEAQEITGF 563 >UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_ERWCT Length = 563 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 252/533 (47%), Positives = 359/533 (67%), Gaps = 5/533 (0%) Query: 17 SVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 +V AVCP W RA +EI L+QQ++QWDD Y+ EGKS +ED VYDQL +L QW +CF Sbjct: 22 AVAAVCPDWDNTRASKEIDALRQQLEQWDDVYYTEGKSPIEDDVYDQLREQLNQWSQCF- 80 Query: 77 SEPRDVMMP--PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVY 134 +P++V+ P NG HPVAHTG++K+ D+ L W+ +R DLWVQPKVDGVAVTLVY Sbjct: 81 -QPQNVIPARLPDNGKQPHPVAHTGLKKLSDRVQLVQWIVQREDLWVQPKVDGVAVTLVY 139 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 + GKL A+SRGNGL+GEDWT+K LI +P +SG ++ LQGE+FL+ H Q G Sbjct: 140 QHGKLVSAVSRGNGLQGEDWTEKARLIPDIPHLLSGAPSSFVLQGELFLKMTDHRQYAQG 199 Query: 195 GINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAV 254 G+NAR+ VAG M R S L+ +G+FVW WPDGP+ M +RL +L GF +T YT A+ Sbjct: 200 GVNARSIVAGEMRRHQPSPVLSQIGLFVWEWPDGPKAMPERLDKLKEMGFAMTADYTHAI 259 Query: 255 KNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEV 314 ++ +V + R+ W+ + LPFVTDGVV+R KEP+ R+W A+W +AWKY PV QVAEV Sbjct: 260 ESFADVEKWRDHWYHSPLPFVTDGVVIRQTKEPQGRYWRNTSADWAIAWKYPPVHQVAEV 319 Query: 315 KAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGI 374 + F+VG++GK++VV ++P+ LDDK V RVN+GS+ RW++WD+ PGD++ VSLAGQGI Sbjct: 320 VDVAFSVGRTGKVAVVLKISPLKLDDKSVSRVNVGSLSRWKQWDVLPGDRVSVSLAGQGI 379 Query: 375 PRIDDVVWRGAER-TKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGE 433 PR+D+VVWRG ER +P E+ F++ +C+ S VCQ+QF++RLVWL + L L G+ + Sbjct: 380 PRLDNVVWRGTERPVIVSPDEHNFHAFSCFRYSVVCQQQFLARLVWLSGEHGLNLAGMRD 439 Query: 434 AGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMG 493 W L Q + SWL LT QL G+ ++ ++ AR++ + W++A+G Sbjct: 440 GMWLRLMQHDLLGDVLSWLYLTEAQLNAVNGMGDKRARDIYMSLQSARQKSLSHWLLALG 499 Query: 494 IPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKL 546 IP+ R+A++A + +W L T Q W+Q G G RA +++ + + + +L Sbjct: 500 IPVPRSAISALNNVNWLALQQRTAQQWRQFSGIGERRAEEIMAFLNHPIVMEL 552 >UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwinia tasmaniensis RepID=B2VL61_ERWT9 Length = 561 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 246/551 (44%), Positives = 351/551 (63%), Gaps = 12/551 (2%) Query: 13 CWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQ 72 + S++ A CP WS +RA EIS LQ Q+++WDD Y++ G+S + D YD L +L QWQ Sbjct: 10 LFSSAIQAQCPVWSASRADAEISALQAQLEKWDDAYYRRGESPIPDEQYDTLHGKLRQWQ 69 Query: 73 RCFGSEPRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAV 130 RCF S D+ P L +G V+HPV+H V+K+ DK AL+ WM RS LWVQPK+DGVAV Sbjct: 70 RCF-SPASDLRKPLLKTDGKVLHPVSHMRVKKLPDKTALTRWMARRSGLWVQPKIDGVAV 128 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ 190 +L+YRDG+L + ISRG+G++GEDWT+K LI +P+ + + QGE++L+ H Q Sbjct: 129 SLLYRDGQLEQMISRGDGVRGEDWTEKARLIPDIPKFIPHSMRVQVFQGELYLKMTDHRQ 188 Query: 191 QQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTY 250 GG NAR+ VAG +M + + L +G FVW WPDGP ++ RL E + GF + Sbjct: 189 AINGGKNARSAVAGALMAKAPAPLLQQIGFFVWEWPDGPTSLAQRLTETRSLGFPDISAW 248 Query: 251 TRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQ 310 T V N DEV R W+ LPFVTDG+VV + WLP EW++AWKY P Sbjct: 249 THRVDNVDEVESWRERWFHQPLPFVTDGIVVHSIPTRRGSDWLPEFGEWVIAWKYAPPEA 308 Query: 311 VAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLA 370 AEV++++FA+G++G+++VV +L PV L DK++ RV++GS+ W++ D+ GDQ+ +SLA Sbjct: 309 TAEVRSVEFAIGRTGRVNVVLNLLPVQLGDKRISRVSVGSIENWKQTDVIAGDQVSISLA 368 Query: 371 GQGIPRIDDVVWRGAERTKPTPPE-NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLD 429 G G PR+D V+WR AER P P+ +FNS++C+ + C++QF++RL WLG K VL L Sbjct: 369 GLGAPRLDKVLWRVAERAYPPQPDAAQFNSVSCFHLTPQCRQQFLARLEWLGGKSVLNLV 428 Query: 430 GIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWV 489 G G W+ L Q+ HIFSWL LT EQL+ PGI + ++ W QF L+R+ PF RWV Sbjct: 429 GTGRQTWQQLIQSGSMVHIFSWLALTKEQLEAVPGIGEQRAQLFWQQFKLSRQLPFKRWV 488 Query: 490 MAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSW 549 A+G+P+ ALN + +W L+ Q WQQLPG G A +++ + + ++++L Sbjct: 489 KALGVPIPEKALNTLTDDNWQPLVSRRLQEWQQLPGVGRKLAGKIVSFLQQREVRQL--- 545 Query: 550 LAAQQITGFEP 560 I G EP Sbjct: 546 -----IEGLEP 551 >UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LIGB_PECCP Length = 562 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 245/553 (44%), Positives = 361/553 (65%), Gaps = 1/553 (0%) Query: 4 WMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQ 63 ++ I++G + S+V VCP W R+++EI L+QQ++QWDD Y+ EGKS V D VYDQ Sbjct: 8 FLIIIVGGISGFSAVAGVCPDWDNTRSKKEIDALRQQLEQWDDVYYTEGKSPVADDVYDQ 67 Query: 64 LSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQP 123 L +L QW CF + + P +G +HPVAHTG++K+ D+ L W+ +R D+W+QP Sbjct: 68 LREQLNQWLGCFQPQSVASVRLPDHGKQLHPVAHTGLKKLSDREQLVQWIAQREDVWIQP 127 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DGVAVTLVY+ GKL A+SRGNGL+GEDWT+KV LI +P ++ + LQGE+FL Sbjct: 128 KIDGVAVTLVYQHGKLESAVSRGNGLQGEDWTEKVRLIPEIPHLLTNVPSLLVLQGELFL 187 Query: 184 QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAG 243 + H Q GG+NAR+ VAG M R S L+ +G+F+W WPDGP+ M +RL++L G Sbjct: 188 KMTDHRQHIQGGVNARSVVAGEMRRHQPSPVLSQIGLFIWEWPDGPKTMPERLEKLTEMG 247 Query: 244 FTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAW 303 F +T YT A+ + + + + W+ LPFVTDGVV+R KEP+ R+W A+W +AW Sbjct: 248 FAMTADYTHAIGSFADAEKWHHYWYHNPLPFVTDGVVLRQTKEPQGRYWRNTSADWAIAW 307 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 KY P QVAEV + F+VG++GK++VV L + LDDK V RVN+GS+ RW++WD+ PGD Sbjct: 308 KYPPFHQVAEVIDVVFSVGRTGKLAVVLKLNLLKLDDKSVSRVNVGSLSRWKQWDVLPGD 367 Query: 364 QILVSLAGQGIPRIDDVVWRGAERTK-PTPPENRFNSLTCYFASDVCQEQFISRLVWLGA 422 ++ VSLAGQGIPR+D+VVWR ER +P E+ F++ +C+ S VCQ+QF++RLVWL Sbjct: 368 RVSVSLAGQGIPRLDNVVWRSTERLPIVSPSEHDFHAFSCFRYSTVCQQQFLARLVWLSG 427 Query: 423 KQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARK 482 + L L G+ + W L Q E + SWL LT QL G+ ++ ++ AR+ Sbjct: 428 EHGLNLTGVRDGMWLRLMQHGLLEDVLSWLSLTEAQLNAVTGMGDKRARDIYKSLQSARQ 487 Query: 483 QPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 P +RW++A+G+P+ R+A++A + +W L T Q W+Q G G RA +++ + ++ Sbjct: 488 MPLSRWLLALGLPVPRSAISALNHVNWLALQQWTAQQWRQFSGIGERRAEEIMAFLKHPA 547 Query: 543 IKKLGSWLAAQQI 555 + + + L A+ I Sbjct: 548 VVEFIARLDAEGI 560 >UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA Length = 567 Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust. Identities = 246/564 (43%), Positives = 355/564 (62%), Gaps = 10/564 (1%) Query: 1 MKVWMAILIGILCWQSSVWAV--CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVED 58 +K+ M +LI WA CP W R EI+ L+QQ+ +W Y ++G S V D Sbjct: 6 LKIIMFLLISNTIVVGGAWATSTCPDWPATRIAVEINALEQQLNKWSAAYHQQGHSPVTD 65 Query: 59 GVYDQLSARLTQWQRCFGSEPRDVMMP-PLNGAVMHPVAHTGVRKMVDKNALSLWMRERS 117 +YDQL +L WQ C G + P P G +HPVAH+G++K+ D+ AL+ WM R Sbjct: 66 DIYDQLQDKLRVWQSCRGLPDKTESQPIPGKGQFLHPVAHSGLKKLKDETALTRWMAGRK 125 Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL 177 +LWVQPKVDGVAVTLVY GKL + +SRGNG+KG++WT+K ISA+PQ ++ A TL Sbjct: 126 NLWVQPKVDGVAVTLVYHGGKLVQLLSRGNGVKGQNWTEKAPFISAIPQYIANAPALLTL 185 Query: 178 QGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLK 237 QGE+FL +GH Q + GG+NAR+ VAG +MR+ S L +GVF+WAWPDGP M +++ Sbjct: 186 QGELFLLMDGHQQAKSGGVNARSTVAGALMRKSPSPLLAQVGVFIWAWPDGPTTMKEKVA 245 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQA 297 L GF T Y+ V + +V + R W++A LPFVTDGVVVR +EP R+W Sbjct: 246 LLQVMGFPFTAKYSEPVMSHLDVVQWRQFWFQAPLPFVTDGVVVRQEEEPAGRYWQATPG 305 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 +W +AWKY P+ +AEVK I F +G++GK +VV + P+ +DDK ++RVNIGSV RW++W Sbjct: 306 QWSMAWKYPPLQHIAEVKDIHFTLGRTGKGTVVLEVLPIKIDDKWIRRVNIGSVTRWKQW 365 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE-NRFNSLTCY-FASDVCQEQFIS 415 DIAPGD I ++LAG GIPR+D+VVWR +R T P ++F+ L+C+ C+ QF+S Sbjct: 366 DIAPGDHITLALAGHGIPRLDNVVWRVHQRNTITAPNWDKFHQLSCFQRLPHGCEPQFLS 425 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWH 475 RL+WL L + GIG W+ L + WLLLTPEQ+ + PGI +++ +++ Sbjct: 426 RLIWLSGPGGLDIGGIGGGFWQELIHHELINDLVGWLLLTPEQIASIPGIGNARAEKIYQ 485 Query: 476 QFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVI 535 QF A++QPF+RW++A+G P S + W +L + W + G G RA+Q+ Sbjct: 486 QFQRAKQQPFSRWLLALGFPQV-----VSVDAQWQVVLRRSLSEWATMAGIGQMRAKQIK 540 Query: 536 EWKENAQIKKLGSWLAAQQITGFE 559 + ++ ++ L +L+ Q++ GFE Sbjct: 541 HFLDHPDVQALADFLSTQKVVGFE 564 >UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UL89_YERRU Length = 569 Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust. Identities = 231/566 (40%), Positives = 353/566 (62%), Gaps = 9/566 (1%) Query: 1 MKVWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV 60 M ++A+++G + Q++ + CP WS EI+++++Q QWD Y ++G S ++D + Sbjct: 3 MMRFIAVMLGWVICQAATASECPEWSEHELVTEIAKMEEQFGQWDKAYHQQGNSLIDDDI 62 Query: 61 YDQLSARLTQWQRCFGS-EP----RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRE 115 YDQL RL+ W+ C + EP + ++ V HPVAHTG++K+ A S W+ Sbjct: 63 YDQLHQRLSHWKSCVKALEPAVNSHITALAGVSDKVTHPVAHTGLKKLTGNLAASEWILA 122 Query: 116 RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS 175 R +LWVQPKVDGVAVTL Y G L + ISRG+G++G+DWT K ISA+P +S Sbjct: 123 RKNLWVQPKVDGVAVTLTYLQGHLTQVISRGDGVRGQDWTDKAQYISAIPSLISPAPPLL 182 Query: 176 TLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDR 235 L GE+FL+ H Q+ GGINARA VAG +MR+ S L+ +GVF+WAWPDGP M ++ Sbjct: 183 VLHGELFLRVHDHRQKDSGGINARASVAGALMRKSPSSLLSQIGVFIWAWPDGPASMVEK 242 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPG 295 L+ L GFTL++ ++ + + + R W+++ LPFVTDG+V+R +EP +W Sbjct: 243 LRTLHRMGFTLSEEFSVPITSFTDAVHWRKIWFQSPLPFVTDGIVIRQEEEPAGHYWQSQ 302 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +AWKY P Q+A+VK++ F +G++GKIS V L+P+ LDDK V+ VN+G+V RW+ Sbjct: 303 PGYWSIAWKYPPFQQMAQVKSVNFTIGRTGKISAVLHLSPIKLDDKWVKGVNLGTVARWK 362 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK-PTPPENRFNSLTCY-FASDVCQEQF 413 W++ PGDQ++VSLAGQGIPR+D V WR +R + TP ++F++ +C+ S +C+ QF Sbjct: 363 RWNVLPGDQVIVSLAGQGIPRLDKVAWRVDKRDEISTPDMDQFHTFSCFRRESTLCETQF 422 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQL 473 I+RL WL + L + GI W+AL + SWL LTPE + PGI + K+ ++ Sbjct: 423 IARLTWLSGRSGLDMLGISSGIWQALTAHGLMGDLASWLELTPEIIATVPGIGEVKANKI 482 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQ 533 + QF A+ +PF W+ A+G P +AA+N ++W+ L W + G+GR +Q Sbjct: 483 YLQFQKAKTRPFISWLAALGFP--KAAINPRVPKTWAALQQQPRGEWLTMANIGAGRLKQ 540 Query: 534 VIEWKENAQIKKLGSWLAAQQITGFE 559 + E+ + ++ +L LA Q+ GF+ Sbjct: 541 ITEFTTHPEMLQLAERLAYHQVQGFK 566 >UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LIGB_PHOLL Length = 580 Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust. Identities = 220/563 (39%), Positives = 336/563 (59%), Gaps = 14/563 (2%) Query: 3 VWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYD 62 V+ + ++ + S+ CP WS + Q E + L QQ+ WD Y ++G SE++D VYD Sbjct: 12 VFSSPIVAAEIFVSNTEKNCPEWSQDKLQRETNSLMQQMAHWDQLYRQKGISEIDDEVYD 71 Query: 63 QLSARLTQWQRCFGSEPRD---VMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDL 119 QL + LT WQ C P V + P N V HPVAHTG+ K+ DK ++ W+ R + Sbjct: 72 QLMSELTHWQFCLKQAPHSDFPVEVFPDNKLV-HPVAHTGLSKLKDKQEINRWLHGRLPV 130 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQG 179 W+QPK+DGVAVTLVY++GKL ISRGNG +G +WT K I +PQ + + LQG Sbjct: 131 WLQPKIDGVAVTLVYQNGKLVSLISRGNGAEGVNWTAKSRYIPDIPQNIENAPPDLVLQG 190 Query: 180 EIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKEL 239 E+FL +E H QQ +G AR +VAGLMMR+D S L +G+F+W+WPDGP M +L++L Sbjct: 191 ELFLHKEEHRQQLLGSDGARNRVAGLMMRKDHSSELKQIGLFIWSWPDGPAEMESKLRKL 250 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEW 299 A GF L Y+ ++ ++V ++R +++ + F TDG+V++ EP+ W G W Sbjct: 251 ADMGFPLALRYSHKIEEPEQVQKLRMHYFEQPMLFATDGIVLKQEIEPKGNQWRSGSNSW 310 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 VAWK+ QV +V+ + F +G++GKISVV L V LDD+++ RVNIGSVRRW++ D+ Sbjct: 311 AVAWKHPLRHQVTQVREVNFTIGRTGKISVVLGLDKVKLDDRQISRVNIGSVRRWRQLDV 370 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENR-FNSLTCYFASDVCQEQFISRLV 418 PGD++ ++LAG GIP++ VVWR ER PP+ + +++L+C + C++QF +RL Sbjct: 371 LPGDRVTLTLAGHGIPKLAQVVWRIKERQDIQPPDKQHYHALSCLTLTVGCEQQFNARLK 430 Query: 419 WLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFN 478 WLG L + G+ W L + + WL L+ +Q+ PGI ++ ++ QF+ Sbjct: 431 WLGEN--LQMTGVSSGSWAMLTERKLVTDLTGWLALSAQQIAALPGIGDKRAQAIYSQFS 488 Query: 479 LARKQPFTRWVMAMGIPLTRAALNASDERSWSQL--LFSTEQFWQQLPGTGSGRARQVIE 536 A+ QPF+ W+ +G+P + + W QL + Q QQL G+ +++ + Sbjct: 489 KAKNQPFSYWMKGIGVPYMDKL--SDNVYHWQQLEQKLAAAQLKQQLT---VGQLKKLSD 543 Query: 537 WKENAQIKKLGSWLAAQQITGFE 559 + +AQIK + L+ ITGF+ Sbjct: 544 FVSDAQIKAIAEKLSVAGITGFD 566 >UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIGB_PSEPW Length = 567 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 212/541 (39%), Positives = 324/541 (59%), Gaps = 7/541 (1%) Query: 22 CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD 81 CP WS +A+ E+++L+ + WDD Y ++G + V D +YDQ L Q+CFG E D Sbjct: 23 CPDWSTKQARTEVAQLRATLANWDDHYHRQGIALVADELYDQARHHLLHLQQCFGQEFTD 82 Query: 82 VM-MPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLN 140 + G + HPVAHTGV K+ D A++ WM + +WVQPKVDGVAV+LVYR G+L Sbjct: 83 PSPLASARGPIAHPVAHTGVEKLHDAAAVARWMTGKKGVWVQPKVDGVAVSLVYRQGRLV 142 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARA 200 + +SRG+GL+G DW++ + + ++ + + PL + LQGE++L+ + H+Q + G N R Sbjct: 143 QLLSRGDGLQGHDWSRHIKDLDSITRQLPQPL-DVVLQGELYLRLQAHVQAEAGSSNVRG 201 Query: 201 KVAGLMMR-QDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADE 259 VAG++ R Q + S+G+FVW WP GP +RL +LA GF +Q ++ A+ +E Sbjct: 202 TVAGMLARKQLGPEPGASIGLFVWDWPHGPDNQGERLTQLAAWGFPDSQRFSTAIDTPEE 261 Query: 260 VARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQF 319 R W+++ LPF TDGV++R P + W P W+ AWKY +AEV+ ++F Sbjct: 262 ATHWRLHWYRSPLPFATDGVILRQDSRPPADRWQPNAPYWIAAWKYPFAQALAEVREVRF 321 Query: 320 AVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDD 379 +G++GK++ + L PV LDD+++ +V++GS+ RW+ DI PGDQ+ +SLAG IPR D Sbjct: 322 LIGRTGKVTPLLRLKPVTLDDRRISQVSLGSLARWRALDIRPGDQVAISLAGLTIPRFDQ 381 Query: 380 VVWRGAER-TKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRA 438 VV R ER P P ++ +C+ ASD CQEQFI+RLVWL KQ L + G G+ W+ Sbjct: 382 VVHRAVERQVLPVPEAEQYGQHSCWQASDGCQEQFIARLVWLSGKQGLAMPGTGKGTWKR 441 Query: 439 LHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR 498 L Q + WL L +QL + PGI++ + QL F++ R +PF +W +G+P Sbjct: 442 LVQAGLVTSLTDWLTLDAQQLLSVPGISRKTATQLQRSFDIGRNRPFAQWRKGLGVP--- 498 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 A + +W L + WQ LPG G+ RA Q+ + + Q++++ + L + I GF Sbjct: 499 APAQVPRDENWQTLAGRSASDWQTLPGIGATRATQLANFFTHEQVQRIATLLGTRGIDGF 558 Query: 559 E 559 Sbjct: 559 H 559 >UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=LIGB_CHRSD Length = 629 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 219/566 (38%), Positives = 321/566 (56%), Gaps = 22/566 (3%) Query: 6 AILIGILCWQSSVWAV---CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYD 62 +L+G+ WA CP +P Q + L +I +WD Y+++G+ V+DG YD Sbjct: 27 CLLVGLSTLAMPGWASAPPCPQMTPEAMQNDYQALDARIARWDRAYYRQGQRLVDDGTYD 86 Query: 63 QLSARLTQWQRCFG--SEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD-- 118 RL W CF ++P P GA HPVA TG+ K+ D++A++ W+ + D Sbjct: 87 SAKRRLAHWAECFPLLAKPSVNTHEP-TGAKHHPVAQTGIAKLPDRDAVAGWVARQGDHP 145 Query: 119 LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG---PLANS 175 LWVQPKVDGVAVTLVYR G+L AISRG+G+ G+DW K I+A+P + PL Sbjct: 146 LWVQPKVDGVAVTLVYRHGRLAAAISRGDGVSGQDWYTKALHIAAIPSHLPADAPPLV-- 203 Query: 176 TLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLMSD 234 LQGE++ +R H Q + G ARA++AGLM R +D S +G+FVWAWP+GP M + Sbjct: 204 ILQGELYARRTAHRQSRDGTDGARARIAGLMARDTLTDREGSTIGLFVWAWPNGPDTMPE 263 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLP 294 RL+ LA GF T V A+++A R W++ LPF TDGVVV+ P W Sbjct: 264 RLETLAGWGFGDVAEMTHGVATAEDIAAWRQRWYRHALPFATDGVVVKRGDRPPGSDWQA 323 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 +W +AWKY +A V A++F+VG++G+I+VVA L PV+L DK+V RV++GS+ W Sbjct: 324 SPPDWAMAWKYPAREALARVDALEFSVGRTGRIAVVAELEPVLLGDKRVTRVSLGSLAHW 383 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE-NRFNSLTCYFASDVCQEQF 413 + D+ PGDQ+ + LAG IP++ +VV R R + PE ++++ L+C + C++QF Sbjct: 384 RRTDVRPGDQVRLRLAGLTIPQLQEVVVRTRPRPQVDAPEADQYDRLSCLRFTPACRDQF 443 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQL 473 ++RL WLG+ + L GIG A W L + + W L L+ PG+ K K+A+ Sbjct: 444 LARLEWLGSDEGLDFPGIGPATWNQLVDAGLVKGLLDWRTLDTAALEALPGVGK-KTARA 502 Query: 474 WH-QFNLARKQPFTRWVMAMGIP-LTRAALNASDER-SWSQLLFSTEQFWQQLPGTGSGR 530 W F LA + RW+ A+G+P + R AL + ER + L W+ G G R Sbjct: 503 WQRHFALADTRSAVRWLRALGVPAVPRQALTDALERYGMAGLGTLAPPDWRDYSGIGETR 562 Query: 531 ARQVIEWKENAQIKKLGSWLAAQQIT 556 A Q+ + + I+ WLA+ + T Sbjct: 563 AMQLTRFFRDTDIRH---WLASLEST 585 >UniRef50_D2U3F9 NAD-dependent DNA ligase LigB n=1 Tax=Arsenophonus nasoniae RepID=D2U3F9_9ENTR Length = 547 Score = 345 bits (886), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 190/548 (34%), Positives = 295/548 (53%), Gaps = 53/548 (9%) Query: 22 CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP-- 79 CP W EI + ++K+WD+ Y+ G+S V D YDQ+ A W C P Sbjct: 38 CPDWPKLVLHREIKAINSELKRWDEAYYINGQSLVNDETYDQIFALWKHWSNCLRLPPDK 97 Query: 80 RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKL 139 + + P+ G HPV HTG++K + + ++ W+ R ++W+QPKVDGVA TLVY+ GKL Sbjct: 98 TNTLSLPIKGRKTHPVIHTGLKK-ITADEIARWIAGRHEVWLQPKVDGVAATLVYKKGKL 156 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINAR 199 ISRGNG++G DWT K + A+P+T+ LQGE+F + GH Q GG NAR Sbjct: 157 AALISRGNGIEGIDWTPKADFLPAIPKTIPNHATQLILQGELFWYQTGHQQAIAGGANAR 216 Query: 200 AKVAGLMMRQD-DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNAD 258 KVAG +MR++ +G+F+W+WPDGP M + +L GF LT+ Y+ V + D Sbjct: 217 NKVAGWLMRKNLLVQQEEQIGIFIWSWPDGPSNMQTQFAQLERWGFPLTKRYSHLVTSVD 276 Query: 259 EVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQ 318 ++ + + ++ +PF TDG+V++ ++W G W VAWKY +VA+V A++ Sbjct: 277 QITQWQRYYYNQPMPFATDGIVLKQLPYTLGQYWQAGINNWSVAWKYPTQNRVAQVAAVK 336 Query: 319 FAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRID 378 F +G++GKI+ P++ I PGD I +SL+G GIP+ D Sbjct: 337 FNIGRTGKIN------PII--------------------GILPGDAIQISLSGHGIPKFD 370 Query: 379 DVVWRGAERTKPTPPENR-FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 +VW+ +R + PE + ++ L+C++ S C+ QF++RLVWL AKQ L ++GI E GW Sbjct: 371 KIVWQIKQRKMLSVPEQKNYHQLSCFYYSMRCESQFVARLVWL-AKQ-LKMEGINEKGWL 428 Query: 438 ALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT 497 AL + + ++ W LT EQ+ +K ++ QF A+K+PF+ W+ +G+PL Sbjct: 429 ALIRAGKITNLMDWSRLTLEQITEVAMFKANKGKFIYQQFLSAQKRPFSEWLKGLGVPLP 488 Query: 498 RAALNASDERSWSQLLFSTEQFWQQLPGTGSGRA-------RQVIEWKENAQIKKLGSWL 550 LFS W L A ++++++ EN +K+L L Sbjct: 489 EK-------------LFSKINCWNDLSSKEINSAILSRKQQKKLVQFIENKDVKQLVKVL 535 Query: 551 AAQQITGF 558 +I GF Sbjct: 536 GQHKINGF 543 >UniRef50_B2PUQ1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PUQ1_PROST Length = 570 Score = 345 bits (884), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 182/491 (37%), Positives = 288/491 (58%), Gaps = 11/491 (2%) Query: 22 CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC--FGSEP 79 C S ++E +L +Q++QW+ Y G S V D YDQL QWQ+C + Sbjct: 41 CSTLSQDELKKESQKLGEQLQQWNRLYRLSGNSPVTDETYDQLLNTWQQWQKCQNLSGQL 100 Query: 80 RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKL 139 + +PP + V HP+ HTG++K+ + + + W+ R ++W+QPKVDGVA++LVY+ GKL Sbjct: 101 PPIHLPPHSRTVKHPIVHTGLKKLNEVD-IGKWIDTREEVWLQPKVDGVAISLVYQQGKL 159 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINAR 199 ISRGNG++G +W K I A+P+ + LQGE+F + + H QQ GG+NAR Sbjct: 160 VSMISRGNGIEGLEWRDKADFIPAIPKQLPTSQPQLILQGELFWRLKDHRQQASGGVNAR 219 Query: 200 AKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNAD 258 +VAG +MR+ T + + VF+WAWP+G ++ ++LA GF LTQ Y+ V Sbjct: 220 NQVAGWLMRKSKPVTPEANIDVFIWAWPEGVGKAEEQWRQLANLGFPLTQQYSHKVTTMA 279 Query: 259 EVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQ 318 +V + ++ +++ +PF TDG+V+++ P W W VAWK+ ++V + Sbjct: 280 QVKKWQSYYYQQPMPFATDGIVLKSFPTPRVAAWQVNHNSWSVAWKHPYTRIASKVTDLH 339 Query: 319 FAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRID 378 F VG++G +SVVA + PV LD KKV R+ +GS++ WQ+ D+ GD I V+LAG GIP+++ Sbjct: 340 FRVGRTGAVSVVAEIEPVELDSKKVSRLYLGSLKSWQKKDLLVGDTIQVALAGHGIPKLE 399 Query: 379 DVVWRGAERTKPTPPE-NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 V+WR +RT P + +F++L+C+ + C++QF++RL WLG + L + GI EA WR Sbjct: 400 SVIWRLQQRTYPDLSQFKQFHALSCFVMTPQCEQQFVARLNWLGKQ--LKIKGISEATWR 457 Query: 438 ALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT 497 + + + +W L+P + P K+K ++ QF L +QP W+ +GIPL Sbjct: 458 EWAEHYHLNKLTTW--LSPSWQTSLPNTKKTK--KIIEQFRLVGQQPLMNWLKGLGIPLK 513 Query: 498 RAALNASDERS 508 L+ E S Sbjct: 514 DKHLSLITELS 524 >UniRef50_D1P0P2 NAD-dependent DNA ligase adenylation domain protein n=2 Tax=Providencia RepID=D1P0P2_9ENTR Length = 557 Score = 338 bits (866), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 179/479 (37%), Positives = 287/479 (59%), Gaps = 16/479 (3%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG---SEPRDVMMPPLNGAVM 92 RL Q+++W+ +Y +G S + D VYDQL ++ Q QRC S P+ V +P L V Sbjct: 36 RLGNQLQEWNKNYLVDGFSPINDEVYDQLLSKWQQRQRCLSLSDSLPQ-VPLPILTPLVK 94 Query: 93 HPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGE 152 HP+ HTG++K + N ++ W+ +R ++W+QPKVDGVAV+LVY +G+L ISRGNG++G Sbjct: 95 HPLPHTGLKKQ-NLNEITTWIAKRKEIWLQPKVDGVAVSLVYDNGQLVSLISRGNGVEGL 153 Query: 153 DWTQKVSLISAVPQTVSGPLANST-LQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDD 211 +W +K I +P+ + P+ LQGE+F + H+Q+Q+GG+NAR+KVAG +MR+ Sbjct: 154 EWRKKADFILDLPKVI--PIKQRVILQGELFWKLNNHVQKQLGGLNARSKVAGWLMRKKL 211 Query: 212 SDTL-NSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA 270 + + +++G+F+WAWPDG +L L+ GF L++ Y+ V + +++ + + +++ Sbjct: 212 PEKIEDNIGIFIWAWPDGDLQQEVQLSRLSEIGFDLSKRYSHQVTSIEQIIQRQEDYFST 271 Query: 271 ELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVV 330 LPF TDG+V+++ P S W Q W +AWKY ++E+ ++F VG++G ++VV Sbjct: 272 PLPFATDGIVLKSFPTPPSAAWQSNQNSWAIAWKYPLQNIISEITGLKFGVGRTGIVNVV 331 Query: 331 ASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP 390 AS+ PV LD K+V VN+GS+ W++ D+ GD I ++LAG GIP+++ V+WR A R P Sbjct: 332 ASIKPVTLDAKQVSHVNLGSLNSWKKKDLLVGDHIQLTLAGHGIPKVEQVIWRVAHRDYP 391 Query: 391 -TPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 T +FN +C+ S C QF++RL WLG + LG+ G+GE W+ + + + Sbjct: 392 ETMLLEQFNRWSCFSYSIECLPQFVARLTWLGKQ--LGIKGVGEKTWQQWAENYGLSQLL 449 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERS 508 W L+P P K+ L Q QP W+ + IPL+ + D S Sbjct: 450 EW--LSPSWQGQLPK-TKTNLKHL-EQLQKVADQPLAVWLKGLDIPLSNTEIKKIDTIS 504 >UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XH23_9ENTR Length = 564 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 181/485 (37%), Positives = 278/485 (57%), Gaps = 12/485 (2%) Query: 21 VCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR 80 +C E RL +Q+++WD Y EG SEV D VYDQ+ A+ + QRC R Sbjct: 37 ICHTLDDKLMGAEQLRLGEQLQEWDRQYQIEGVSEVSDEVYDQILAQWRRGQRCLNLPDR 96 Query: 81 --DVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGK 138 + P V HP+ HTG++K+ K ++ W+ R ++W+QPKVDGVAVTL Y +G Sbjct: 97 LPQPVQPNTERLVKHPIPHTGLKKLEFKE-IAPWLESRHEVWLQPKVDGVAVTLHYENGH 155 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINA 198 L ISRG+G KG +W +K I +P+T+S + LQGE+F + H+Q+ GG NA Sbjct: 156 LVSMISRGDGSKGLNWREKADFIQGIPKTISIK-QSIVLQGELFWKLNEHVQKIDGGQNA 214 Query: 199 RAKVAGLMMRQD-DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNA 257 R+KVAG +MR+D + + +GVF+W+WPD MS +L ELA GF L Q Y+ + + Sbjct: 215 RSKVAGWLMRKDMPAQVTDDIGVFIWSWPDNSTPMSQQLSELAMLGFDLAQRYSHPIVES 274 Query: 258 DEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAI 317 +A+ R+ ++ +PF TDGVV+++ P S W Q W +AWKY + V++V + Sbjct: 275 QSIAQWRDHYYSISMPFATDGVVLKSFPTPSSSAWRANQNSWSIAWKYPLKSIVSDVVDL 334 Query: 318 QFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 F VG+SG ++V+A++ PV +DDKKV ++ +GS+ W++ D+ GD+I ++L+G G P + Sbjct: 335 TFRVGRSGVVNVIANIEPVRIDDKKVSKIRLGSLNSWKQKDVLVGDKIQLTLSGHGAPLM 394 Query: 378 DDVVWRGAERTK-PTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 + V+WR R T P F++L+C S C QF++RL WLG + L + G+GE W Sbjct: 395 EKVIWRQKPRQYLNTLPLENFHALSCLSYSTDCASQFVARLTWLGKQ--LNIRGVGEKTW 452 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 + + + W L+P+ P ++ +A Q A+ Q W+ +GIPL Sbjct: 453 MVWVEKYGLSELLGW--LSPDWQNRLPKTQQTANA--LEQLQQAQHQLTANWLKGLGIPL 508 Query: 497 TRAAL 501 L Sbjct: 509 KSEQL 513 >UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=DNLJ_ACHLI Length = 659 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 141/560 (25%), Positives = 245/560 (43%), Gaps = 56/560 (10%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP--LN 88 Q I L++QI + + Y + + + D VYD L L + + + E D P + Sbjct: 4 QTRIKELRKQINEANYLYHTKDQPIISDFVYDGLMRELIELETKY-PEYDDETSPTKKIG 62 Query: 89 GAVM-------HPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVYR 135 G V+ H V + + +K L ++ + + K+DG+AVTL+Y Sbjct: 63 GVVLDAFKKHTHTVPMMSLSNIFNKEELKVFYDRIQKVIPNTSFTTELKIDGLAVTLIYE 122 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQ----REGHIQQ 191 G KA +RGNG+ GED T+ V I +P +S PL + ++GEI++ +E ++++ Sbjct: 123 KGIFKKAATRGNGVVGEDITENVKTIKTLPLQLSKPL-DIEVRGEIYMSHKTFKEVNLER 181 Query: 192 QMGG----INARAKVAGLMMRQDDSDTL--NSLGVFVWAWPDGPQLMS---DRLKELATA 242 +N R AG +RQ DS + L +F + S + L+ L+ Sbjct: 182 ANSNLDLFVNPRNAAAG-TVRQLDSKVVAKRRLDLFTYTVVGASNFNSTQKETLEFLSEL 240 Query: 243 GFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHWLPGQAE 298 GF + Y + V N D ++ + + + LP+ TDGVV++ + E+ + + Sbjct: 241 GFPVNPHY-KLVDNLDALSDAIDNYDILRKTLPYDTDGVVIKVNQFEHYETIGYTAKYPK 299 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 + A+K++ Q+ +V+ I F VG++G I+ VA L PV + V R + + D Sbjct: 300 YAGAYKFEAEKQITKVEDIIFQVGRTGVITPVAVLTPVFISGSLVSRATLHNEDYILNKD 359 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-------------YFA 405 I DQ+LV AG+ IP + +VV RT P E + C Y A Sbjct: 360 IRIDDQVLVHKAGEIIPEVIEVVL--GSRTNQAPFEMVKHCPACESNLVRKQGEADYYCA 417 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI--FSWLLLTPEQLQNTP 463 +D C + + L+ ++ + +D +GE LH + I L +QL+ P Sbjct: 418 NDNCPGKNVFGLIHFASRAAMDIDTLGEKVVELLHDQTYLQTIPDIYKLHTFKDQLEELP 477 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQ-- 521 G K K +L + ++ Q R + +GI A + + + + + ++ Sbjct: 478 GFGKKKVEKLLNAIEASKMQTLDRLIFGLGIKNVGAKVAKTLLNHYPSITLLADAKYEDL 537 Query: 522 -QLPGTGSGRARQVIEWKEN 540 Q+P G A V + N Sbjct: 538 IQIPDIGPEIADSVTTYFSN 557 >UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DNLJ_OENOB Length = 684 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 135/528 (25%), Positives = 233/528 (44%), Gaps = 75/528 (14%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP-- 85 +AQ EI L ++ +W +Y++E VED VYD ARL ++ + S + MP Sbjct: 16 TQAQAEIRDLSDELTKWGREYYEEDNPSVEDYVYDAHYARLVALEKAYPS----LAMPDS 71 Query: 86 PLNGA---------------VMHPVAHTG------VRKMVD------KNALSLWMRERSD 118 P V+HPV +++++D KNA S +++ + Sbjct: 72 PTQHVAAGNQTKNDSRGLQKVVHPVPMLSLGDVFSIQELLDWDLVTTKNAGS---QQKYN 128 Query: 119 LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ 178 L + K+DG+A++L Y +G+L +A +RG+G GE+ T V I+ +P+ ++ PL ++ Sbjct: 129 LEL--KIDGLAISLRYENGRLIQASTRGDGSIGENVTDNVKTITEIPKVLNEPLT-IEVR 185 Query: 179 GEIFLQREG--HIQQQMGG------INARAKVAGLMMRQDDSDTLN-SLGVFVW--AWPD 227 GEI++++E + QQ N R AG + + D T L F++ A D Sbjct: 186 GEIYMRKEAFADLNQQRDEEGKTIFANPRNAAAGSLRQLDPKITAKRHLSSFIYYTAQND 245 Query: 228 --GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRA 283 G SD L+ GF + + + + EV +E+ + LP+ DGVVV+ Sbjct: 246 VLGVNTQSDVLERFRQLGFPVNSS-NKVIDRMTEVKDYIDEYTIKRDNLPYGIDGVVVKV 304 Query: 284 AKEPESRHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 + + + L + W +A+K+ P + V+ I + VG++G ++ A + PV L Sbjct: 305 -NDLDVENELGNTVKIPRWSIAYKFPPEEALTVVRDITWTVGRTGVVTPTAIMDPVFLAG 363 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTP---PE 394 KV+R ++ + QE D+ GD + + AG IP + V+ + + P P P Sbjct: 364 TKVKRASLHNPDYLQEKDVRIGDTVTLHKAGDIIPEVGQVILKKRPADAQAYPIPVYCPS 423 Query: 395 NRFN--------SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 + +L C C Q L+ ++ + +DG+G L + Sbjct: 424 CKSKLVHVQGEVALRCINPE--CPAQIKEGLIHFASRNAMNIDGLGPRVVEQLLSKNLIR 481 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 I LT QL A S L + +R+ R + A+GI Sbjct: 482 KISDLYALTESQLTTLDKFADLSSKNLIQAIDRSRQNSVERLITALGI 529 >UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 Length = 667 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 133/574 (23%), Positives = 241/574 (41%), Gaps = 58/574 (10%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN----- 88 ++ L + Q+ +Y+ E V D YD+L L + + E + V P + Sbjct: 8 VNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEH-PEYKTVDSPTVRVGGEA 66 Query: 89 ----GAVMHPVAHTGVRKMVDKNALSLW---MRER---SDLWVQPKVDGVAVTLVYRDGK 138 V H + +++ L + +RE+ + + K+DG+AV+L Y DG Sbjct: 67 QASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGNVEYMCELKIDGLAVSLKYVDGY 126 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ-------- 190 + ++RG+G GED T+ + I A+P + PL N ++GE ++ R ++ Sbjct: 127 FVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPL-NVEVRGEAYMPRRSFLRLNEEKEKN 185 Query: 191 -QQMGGINARAKVAGLMMRQDDSDTL--NSLGVFVWAWPD----GPQLMSDRLKELATAG 243 +Q+ N R AG +RQ DS L VF+++ D + S+ L EL G Sbjct: 186 DEQLFA-NPRNAAAG-SLRQLDSKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELDKLG 243 Query: 244 FTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESRHWLPGQAEW 299 FT + R V N D V +W + LP+ DG+V++ + + + W Sbjct: 244 FTTNKNRAR-VNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSPRW 302 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +A+K+ V ++ I+ ++G++G ++ A L PV + V R ++ + + DI Sbjct: 303 AIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHNEDLIHDRDI 362 Query: 360 APGDQILVSLAGQGIPRI---------DDVVWRGAERTKPTPPENRFN-----SLTCYFA 405 GD ++V AG IP + +D V P+ +L C Sbjct: 363 RIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEGEVALRCINP 422 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI 465 CQ Q + L+ ++Q + +DG+G + L+Q+ + + LT E L + Sbjct: 423 K--CQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEEDLLPLDRM 480 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIP---LTRAALNASDERSWSQLLFSTEQFWQQ 522 + K L A+ + +GI + + + A + +LL TE + Sbjct: 481 GQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAELVE 540 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 + G A+ V+ + EN I+ L L + + Sbjct: 541 IHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVN 574 >UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN Length = 693 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 139/573 (24%), Positives = 252/573 (43%), Gaps = 58/573 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPR 80 P EE+ RL+++I+ + Y+ + D YD+L RL + +R + S + Sbjct: 12 PKEVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQ 71 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKM--------VDKNALSLWMRERSDLWVQPKVDGVAV 130 V L G V H V + DK + + K+DGV++ Sbjct: 72 RVGGKVLEGFKTVKHSVPMLSLDNTYNEEEIIEFDKRVKKTLQESEVEYVAELKIDGVSI 131 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL-----QR 185 L Y +G+ +RG+G++GED ++ V I +VP + PL ++GEI++ +R Sbjct: 132 ALRYENGRFVLGATRGDGVEGEDVSENVKTIRSVPLRLRKPLT-IEVRGEIYMPVDEFKR 190 Query: 186 EGHIQQQMG---GINARAKVAGLMMRQDDSDTLNS--LGVFVW--AWPDGPQLMS--DRL 236 +++ G N R AG +RQ ++ + S L F++ P+ L + + L Sbjct: 191 LNEEREEEGLPPFANPRNAAAG-TLRQLNTALVASRRLDSFIYYVVHPENYGLKTQWEAL 249 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHWLP 294 + L GF + ++R KN EV EW K EL + DGVVV+ + + + Sbjct: 250 QFLKEIGFKVN-PHSRLCKNIQEVIEYWREWKERKRELDYWVDGVVVKVNRFDFQK--VL 306 Query: 295 GQA----EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 G+ W +A+K+ + + VG++G ++ VA L PV L V+R ++ + Sbjct: 307 GETSKAPRWAIAFKFPAEQARTRILDVTIQVGRTGVLTPVAELEPVQLAGTIVKRASLHN 366 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPEN-----------RF 397 +E DI GD + V AG IP+I + R + PP++ Sbjct: 367 FEYIREKDIRIGDYVFVEKAGGIIPQIVKSIPELRTGSEKEIKPPQSCPVCGGKVGKLSP 426 Query: 398 NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 + + + C + L +++ L ++G+GE L + + I LTP Sbjct: 427 DEVAIRCLNPHCPAKLKRALRTFVSREALDIEGLGEKIIDRLVDSGLVKDIADIFYLTPF 486 Query: 458 QL-QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQLL 513 L Q PGI + A++ + A+K+P + + +GIP+ A + A +S + Sbjct: 487 DLAQLGPGIGQRTIAKILQEIEEAKKRPLHKLITGLGIPMVGQKTAKILAEHFKSLEAIA 546 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKL 546 ++ + + +PG G AR ++E+ N + +++ Sbjct: 547 EASYETLKDIPGIGPEIARSIVEYFRNPKTREI 579 >UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=DNLJ_COPPD Length = 666 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 138/572 (24%), Positives = 243/572 (42%), Gaps = 63/572 (11%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDVM 83 A++ I RL++ I+ + Y+ E+ D YD+L L ++ F S + V Sbjct: 6 AKKRIERLRELIEYHNYRYYVLDSPEISDEEYDKLYRELVTLEKQFPEFITPDSPTQRVG 65 Query: 84 MPPLN--GAVMHPVAHTGVR--------KMVDKNALSLWMRERSDLWVQPKVDGVAVTLV 133 PP V H V + K D+ S ++ + + + K+DG+AV+L+ Sbjct: 66 APPAKEFATVTHEVPMLSLDNAFTEDEIKAFDQRVRSALNQQHVEYFCEHKLDGLAVSLL 125 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----PLANSTLQGEIFLQREG-- 187 Y +G + +RGNG GED T + I +P + G P+ ++GE F+ Sbjct: 126 YENGLFVRGSTRGNGYVGEDVTANLKTIKTIPLRLKGENIPPVVE--IRGEAFMMLRDFE 183 Query: 188 --HIQQQMGG----INARAKVAGLMMRQDDSDTLNSLGVFV---WAWPDGPQLMSDR--L 236 + Q+Q G N R AG + + D S T F+ + G + L Sbjct: 184 ALNEQRQALGQPLFANPRNAAAGSIRQLDSSITAQRKLYFMPYGFGLVQGMDFETQERFL 243 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHW-- 292 K+ GF + + + R + +E W + ELPF DGVV++ R+W Sbjct: 244 KQCQEWGFRINE-HNRKASSIEEALEFIRYWTEHRVELPFPADGVVIKVNN---LRYWDI 299 Query: 293 ---LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 + +A+K+ + ++K + F VG++G I+ VA L PV+LD V R + Sbjct: 300 LGTTAHAPRYAIAYKFPAEEKETKLKDVVFQVGRTGIITPVAMLEPVVLDGATVSRATLH 359 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPEN----------RF 397 + ++ D+ GD + + AG IP I V R + + PP Sbjct: 360 NFDIVRQLDVRKGDVVKLKRAGMVIPEIIGVAAEKRTGKEEQIEPPTTCPVCGGPTEWDG 419 Query: 398 NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 L C + C Q L+ ++ + +DG+GE+ L ++I L+ + Sbjct: 420 AYLKC--VNITCPAQLKGHLLHWASRDAMDIDGLGESIIENLVDMGLVKNIADLYKLSVQ 477 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP---LTRAALNASDERSWSQLLF 514 L P +A+ + +L+ ++ +PF R + +GIP L A + A S + LL Sbjct: 478 DLLTLPRLAQRSATKLYENIQRSKDRPFFRVLYGLGIPRVGLKTAQMLAEHFGSINALLN 537 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKL 546 +T + G G+ A +++ ++ Q+ +L Sbjct: 538 ATMDELTSIEGIGTDTAETILKALQSPQVHEL 569 >UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_BLASB Length = 681 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 118/504 (23%), Positives = 227/504 (45%), Gaps = 49/504 (9%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN-GA---- 90 +L++++ +++ Y+ S++ D +D+ L ++ + E D P + GA Sbjct: 27 QLRKELSKYNYQYYNFDTSDISDFHFDKKLEELFFLEKKY-PEFYDPTSPTIKIGAEIHE 85 Query: 91 ----VMHPVAHTGVRKMVDKNALSLWMRERS------DLWVQPKVDGVAVTLVYRDGKLN 140 H ++K K L +W ++ S + K DGV++ L+Y++G L Sbjct: 86 PSTVFYHKYKMYSLQKTYSKKELIIWKKKISKSIHTFSFVCELKYDGVSINLIYKNGFLT 145 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREGHIQQQMGGI-- 196 A +RGNG KGED T+ + I VP + G + L+ GE+FL + I+ I Sbjct: 146 NAGTRGNGEKGEDVTENIKTIKHVPLKLRGNNYPAYLEIRGEVFLTTKNFIEINKKRIKS 205 Query: 197 ------NARAKVAGLMMRQDDSDTLNSLGVFVWAWP-DGPQLMSD----RLKELATAGFT 245 N R +G + Q D + +F A+ G L D LK + GF Sbjct: 206 GKTPYANPRNTASGTLKIQ-DRKKVRQRNLFCIAFHVVGKNLPFDTQYESLKHIKNWGFQ 264 Query: 246 LTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHWL---PGQAEWL 300 + +T R KN +EV + W WK +LP+ DG+V++ E + + L W Sbjct: 265 IPET-ARFCKNMEEVFHFIDFWNLWKDKLPYQIDGIVIK-VNEYQKQSLLGFTNKYPRWA 322 Query: 301 VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA 360 +A+K++ ++ ++ F VG++G ++ VA++ P+++ ++RV + + Q+ I Sbjct: 323 IAYKFRQKLSETKLLSLTFQVGRTGIVTPVANVVPILISGTIIKRVALYNDSFIQKMGIY 382 Query: 361 PGDQILVSLAGQGIPRID--DVVWRGAER-----TKPTPPENRF---NSLTCYFASDVCQ 410 GD +L+ G IP++ ++ R ++ K P N N+ Y + C Sbjct: 383 HGDTLLLEKGGNIIPKVTRINIKKRSSQAFPVFFLKKCPSCNSVLTKNNELFYCTNQNCF 442 Query: 411 EQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKS 470 Q I ++ + + + + IG + L++ ++ L E+L G+ + + Sbjct: 443 SQRIEKIRHFVSVKAMNIQKIGNEMIKKLYKKGFLYSFYNLYELKKEELLQIDGVKEKLA 502 Query: 471 AQLWHQFNLARKQPFTRWVMAMGI 494 + + +++ PF+R + A+GI Sbjct: 503 DSIINNIKKSKENPFSRVLYALGI 526 >UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH Length = 663 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 138/564 (24%), Positives = 239/564 (42%), Gaps = 66/564 (11%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP----- 85 ++ I L++ + Y+ E E+ D YD+L L + ++ E D++ P Sbjct: 4 EKRILELREILNYHSHKYYVEDAPEISDFEYDELYRELEKLEQ----ERPDLITPDSPTQ 59 Query: 86 -----PLNG--AVMHPVAHTGVRKMVDKNALSLWMR-------ERSDLWVQPKVDGVAVT 131 PL G V+H V + + + L + R + + V+ K+DG++V+ Sbjct: 60 RIGGKPLEGFKKVVHAVQMQSLSDVFSREELLAFDRRVREAVGDDVEYVVEKKIDGLSVS 119 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI-- 189 LVY +G + +RG+GL GED TQ + I +P + L ++GE+F+ ++ I Sbjct: 120 LVYENGVFTRGATRGDGLVGEDVTQNLKTIRTIPLRLKRDLPLLEVRGEVFISKKDFIKI 179 Query: 190 --QQQMGG----INARAKVAGLMMRQDDSDTLN--SLGVFVWAWP--DGPQL--MSDRLK 237 +Q+ G N R AG +RQ D + L +FV+ +G S+ L+ Sbjct: 180 NEEQEAAGQQLFANPRNAAAG-SLRQLDPKVTSQRKLDIFVFNIQRIEGQSFKTHSETLE 238 Query: 238 ELATAGFTLTQTYTRAVKNA----DEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWL 293 L GF + Y + K+ +E+ R+ E + E+ F DG VV+ E R L Sbjct: 239 FLKELGFKTSPGY-KVCKDINAVWEEINRIGEE--RGEIDFEIDGAVVK-VNSLEQREIL 294 Query: 294 PGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 + W VA+KY + VK I VG++G ++ +A PV L V R + + Sbjct: 295 GSTIKAPRWAVAYKYPAEVKETVVKKITVNVGRTGVLTPIAIFDPVRLAGSTVSRATLHN 354 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPEN---------RFNS 399 + +E DI GD + + AG IP + DVV+ R + PE R Sbjct: 355 MDYIKEKDIRIGDTVRIRKAGDIIPEVVDVVFEKRSGNEAEFNMPEQCPVCGADVVREEG 414 Query: 400 LTCYFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI--FSWLLLTP 456 Y + + C Q ++V ++ + ++G+G A L + + I +L Sbjct: 415 EAAYRCTGIECSAQLYRKIVHFASRDAMNIEGLGPAIIEVLLEKGLIKEIADLYYLHKEK 474 Query: 457 EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP---LTRAALNASDERSWSQLL 513 E L N + K L +++ R + GI L A L + + S L+ Sbjct: 475 ETLVNIERMGKKSVENLLASIEKSKQNNIDRLIFGFGIRHIGLRAAQLLSENFESLDALM 534 Query: 514 FSTEQFWQQLPGTGSGRARQVIEW 537 ++ + +P G A+ V ++ Sbjct: 535 NASAEDIMAIPEFGEKMAKSVEQF 558 >UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_THEAS Length = 673 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 137/569 (24%), Positives = 250/569 (43%), Gaps = 59/569 (10%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP--- 86 A+ + L + I+ D Y++E E+ D YD L L +R F D+ +P Sbjct: 6 ARSRMEELAELIRHHDRLYYQENSPEITDQEYDALFRELVDLERSFP----DLRLPDSPT 61 Query: 87 --LNGA-------VMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVAV 130 ++G+ + H + V + +S ++R D + +PK+DG+AV Sbjct: 62 LRVSGSPSEAFKRLPHSEPMLSLDNAVSREEVSDFLRRLYDALGGSAPVVCEPKLDGLAV 121 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI- 189 +L+YR G L + ++RG+G GED T V I +P+ + + ++GE+++ R Sbjct: 122 SLLYRGGVLIRGLTRGDGSVGEDVTSNVMTIRDLPKRIDY-MGELEVRGEVYMSRRDFAA 180 Query: 190 ---QQQMGGI----NARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLK 237 +++ G+ N R AG + + D T +L F++ + G + + L Sbjct: 181 LNQRREEEGLPPFANPRNAAAGSLRQLDPRVTAQRNLSCFLYHVVNHREVGLKTQEELLL 240 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHWLPG 295 L F + + + R ++ +EV ++W + P TDGVV++ E R L Sbjct: 241 WLKGRSFPVQEDF-RLCRDPEEVLEYLDDWDRRRHSYPADTDGVVIKL-DSLEGREVLGS 298 Query: 296 ---QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W VA+K+ P + V +I+ +VG++G ++ A L PV L +V+R ++ + Sbjct: 299 TNRSPRWAVAFKFPPEERPTRVLSIEVSVGRTGVVTPTAVLEPVRLSGTEVRRASLHNFD 358 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKP-TPPE------NRFNSLTCYF 404 D+ GD + V AG+ IP + V + E T P PPE +R L Sbjct: 359 ELARKDVRVGDTVWVRKAGEIIPEVIRVDLGLRPEGTAPFVPPEGCPSCGSRLVRLPGEV 418 Query: 405 A----SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 A + C Q R++ ++ + + G+GE L + + LT E Sbjct: 419 AIRCINPSCPAQMKERIIHFASRDGMDVRGLGEKVASQLVDRGMVKDLADLFFLTMEDWL 478 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT--RAALNASDERS-WSQLLFSTE 517 + + + ++ L ++AR +P + + A+GIP R A + +D L+ ++E Sbjct: 479 SLDRMGERSASNLVRALDVARDRPLRKLIYALGIPGVGERTAQDLADRFGRLEALMDASE 538 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKL 546 + + G G AR V ++ N +L Sbjct: 539 EELASVEGVGPVVARSVRDFFRNDSTVRL 567 >UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=DNLJ_GLOVI Length = 668 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 150/581 (25%), Positives = 244/581 (41%), Gaps = 61/581 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPR 80 P +E L+ + +W Y+ EV D +YDQ L + + S R Sbjct: 6 PPEIEEHTRTLRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSPDSPTR 65 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQP--------KVDGVAV 130 V P + +V H V + + L W ER + P K+DG A Sbjct: 66 RVGERPASAFVSVTHRVPMFSLENAFSQAELEKWG-ERLLRAIGPGLEFICELKIDGSAT 124 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREG- 187 L Y DG L + +RG+G++GE+ TQ + I A+P + G + L+ GE F+ R+ Sbjct: 125 ALSYEDGVLVRGATRGDGVEGEEITQNLRTIRAIPLKLLGGEVPAVLEVRGEAFIPRDEF 184 Query: 188 ---HIQQQMGG----INARAKVAGLMMRQDDSDTLNS--LGVFVWAWPDGPQLMS-DRLK 237 + ++Q G N R AG +RQ DS + S LG F + G + L Sbjct: 185 ERINQERQAAGEKLFANPRNACAG-TLRQLDSRVVASRRLGFFAYTAHYGRAESQWEALA 243 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRH--WL 293 EL + GF + + ++ EV W + ELP+ TDGVVV+ R + Sbjct: 244 ELESHGFRV-NPHRSLCRDLAEVRTFCEHWENHRHELPYDTDGVVVKVNAFDHQREVGFT 302 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W +A+KY + V+AI VG++G ++ VA L PV + V R + + R Sbjct: 303 SKFPRWAIAFKYPAEEKSTVVEAIAVQVGRTGALTPVAELQPVAVAGTTVSRATLHNQDR 362 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNSLTCYF-----AS 406 + D+ GD +++ AG+ IP + V+ R E P+ T A+ Sbjct: 363 IESLDVRVGDTVIIRKAGEIIPEVVRVIGELRPPEAVPYVFPQTCPECGTAVVRAPGEAA 422 Query: 407 DVCQEQFISRLV------WLGAKQVLGLDGIGE---AGWRALHQTHRFEHIFSWLLLTPE 457 C L+ W A L +DGIG+ A +L H ++ L+ E Sbjct: 423 VRCPNPRCPALIRGKLGHWCAA---LEIDGIGDKLIARLVSLGLVHTVADLYE---LSAE 476 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQ---LLF 514 QL + +A++ Q + + +QP++R + +G+ A+++ R+++ L Sbjct: 477 QLAGLERLGARSAAKIVEQLDRSHRQPWSRVLYGLGLRHIGASVSVELARAFASADALAR 536 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + L G G AR V+EW A+ + L L A + Sbjct: 537 ADLAAIASLYGFGEELARSVVEWFAQAENRALLERLKAHGL 577 >UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3B8_9BACT Length = 681 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 127/517 (24%), Positives = 230/517 (44%), Gaps = 59/517 (11%) Query: 48 YWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP-LNGAVM-------HPVAHTG 99 Y+ E+ED YD L + Q++R RD + GAV+ H Sbjct: 26 YYVLDAPEIEDDEYDALMREMLQFEREHPDLIRDDSPSKRVGGAVLDAFEKVTHAKPMLS 85 Query: 100 VRKMVDKNALSLWMRERSDLWVQP--------KVDGVAVTLVYRDGKLNKAISRGNGLKG 151 + + KN L W++ ++ QP K+DG+AV+L++ DGK +A +RG+G+ G Sbjct: 86 LEDVFSKNELHDWLQRAAEGVGQPWIPWCCELKIDGLAVSLIFEDGKFVQASTRGDGVVG 145 Query: 152 EDWTQKVSLISAVPQTVSGPL-ANSTLQGEIFLQREGHIQ----QQMGGI----NARAKV 202 ED T+ + + +P + G + + L+GE+++ ++G Q ++ G+ N R Sbjct: 146 EDVTENLKTVKDLPLRLLGDVPGHLELRGEVYMGKDGFAQLNAAREEAGLPLFANPRNAA 205 Query: 203 AGLMMRQDDSDTLN-SLGVFVWAWPD----GPQLMSDRLKELATAGFTLTQTYTRAVKNA 257 AG + + D S +L +F + D G S+ L+ L G + + + RA Sbjct: 206 AGSLRQLDTSVAAKRNLRLFTYYVQDAESYGLHSQSEILEWLKARGLPVQKAWRRAETET 265 Query: 258 DEVARVRNEWWKAE---LPFVTDGVVVRAAKEPESRHWLP-----GQAEWLVAWKYQPVA 309 + + + E W E LP+ TDG V +A + +W W VA+KY P Sbjct: 266 EALDFL--ERWSGERFSLPYATDGAVFKADA---TEYWTVLGNNVKTPRWAVAYKYPPEE 320 Query: 310 QVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSL 369 + ++++I+ ++G++G ++ VA+L PV+L V+R ++ + Q DI GD++ V Sbjct: 321 RKTKLESIEISLGRTGVLTPVANLEPVLLSGTVVKRASLHNDEEIQRKDIRVGDRVWVRK 380 Query: 370 AGQGIP---RIDDVVWRGAERTKPTPPENRFN-----------SLTCYFASDVCQEQFIS 415 AG+ IP R+D G E P +L C S C Q Sbjct: 381 AGEIIPEIVRVDVASRTGTEEPFAMPATCPVCGAAVAKLPGEVALRCLNRS--CPAQLTQ 438 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWH 475 L+ ++Q + + G+G+ L ++ ++ L E L + + + +L Sbjct: 439 GLIHFASRQGMNIQGLGDRLAEQLVRSGLVKNFSDLYALRVEPLVRLDRMGEKSAGKLLQ 498 Query: 476 QFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQL 512 ++++P + A+GI A + A + +S L Sbjct: 499 AIAKSKERPLKFLITALGIREVGAGVAAELAKRFSSL 535 >UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=DNLJ_NITSB Length = 660 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 117/509 (22%), Positives = 227/509 (44%), Gaps = 66/509 (12%) Query: 39 QQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC-------------FGSEPRDVMMP 85 +++K+W Y+ EV D VYD+L + ++++ G+EP Sbjct: 13 EKLKRWAYAYYVLDNPEVPDEVYDKLYREVEEYEKAHPDQIDPTSPTQRIGAEPAKEF-- 70 Query: 86 PLNGAVMHPVAHTGVRKMVDKNALSLWMRE------RSDL--WVQPKVDGVAVTLVYRDG 137 + H + + ++ + W+ R DL +++PK DG ++ L+Y +G Sbjct: 71 ---KKIKHLSKMWSMEDVFNQREMHEWLERVYKNAGRKDLQFYIEPKFDGASLNLIYENG 127 Query: 138 KLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQR--------EGHI 189 L A +RG+G GED T I ++P + ++GE+ +++ E + Sbjct: 128 LLKSAATRGDGEVGEDVTANAKTIPSIPLGIDYK-GLIEIRGEVVIRKDDFEKLNHERAL 186 Query: 190 QQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMS-----DRLKELATAGF 244 + + N R AG +RQ D ++ + W G ++ +++ + GF Sbjct: 187 KGESTFANPRNAAAG-SLRQLDPKVTAQRKLYFYPWDIGYNTLNFKYQHEKMDFVYQQGF 245 Query: 245 TLTQTYTRAV-KNADEVARVRNEWWKA--ELPFVTDGVVVRAAKEPESRHWLPGQA---- 297 + + RA+ +N +E+ ++ E+ K +LP + DG+VV+ + + H + G Sbjct: 246 I--KPFKRAICENEEEIQQLYEEFSKERDKLPVMLDGMVVKV--DEIALHEILGYTVKYP 301 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 W+VA+K+ V ++ + I VG++G I+ VA L PV ++ V+R + + + Sbjct: 302 RWMVAYKFPAVEKMTRIIDIVPQVGRTGVITPVAILEPVEIEGVVVERATLHNYAEIERK 361 Query: 358 DIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPE----------NRFNSLTCYFA 405 DI GD ++V +G IP + V+ +R + K P+ + + C Sbjct: 362 DIRIGDMVIVIRSGDVIPEVTKVLTQYRTGKEKKVERPKVCPVCGQPVLDEGILIKCQNL 421 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI 465 S C + ++ +++ +KQ L + G+GEA + L++ + + L E L PG Sbjct: 422 S--CPARVVNSIIYFASKQCLDISGLGEATVKLLYEKGLVKDVVDLFKLKKEDLLRLPGF 479 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 A+ K+ L + R+V A+GI Sbjct: 480 AEKKAQNLIDATQSVKGVECWRFVNALGI 508 >UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C335E5 Length = 682 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 142/587 (24%), Positives = 251/587 (42%), Gaps = 83/587 (14%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM------ 84 Q+ I +L++ ++Q + Y +S +ED VYDQL +++ + E R+ + Sbjct: 7 QKTIIKLRKHLQQANYAYHVLNESIMEDSVYDQL------YRQLYNLEQRNPNLISSDSV 60 Query: 85 -------PPLN-GAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQP------------K 124 P L+ +V H + + + L W R+ +++ K Sbjct: 61 TQRVGEKPALHFNSVKHDIPLYSLENAFNLQELEAW-ENRNQKYLKSQENQLIKYIAELK 119 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVP--QTVSGPLANSTLQGEIF 182 +DG A++L Y +G L + ++RG+G+ GED TQ + I ++P + P + + GE F Sbjct: 120 IDGSALSLTYENGLLTRGLTRGDGIVGEDITQNIRTIFSIPLHLNLDDPPSIMHVNGEAF 179 Query: 183 L-----QREGHIQQQMGG---INARAKVAGLMMRQDDSDTLNS--LGVFVWA-WPDGPQL 231 L +R +Q+ G N R AG +RQ DS ++ L F ++ + D + Sbjct: 180 LPLDEFKRINKQKQKEGKSLFANPRNAAAG-TLRQLDSKIVSERKLQFFAYSLYADNLDI 238 Query: 232 MS--DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP 287 S D LK L GF L Y R K+ D V NEW K LP++TDGVV++ Sbjct: 239 KSQWDTLKFLQECGF-LVNPYYRLCKSLDTVTNYFNEWKSAKKHLPYMTDGVVIKINSHI 297 Query: 288 ESRHWLPGQ--AEWLVAWKYQPVAQVAE-VKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 + Q W +A KY P +++ V+ I F G++G ++ +A + PV+L V+ Sbjct: 298 LQKELAYTQRFPRWAIALKY-PAEEISTVVEDIIFNTGRTGAVTPMAVMNPVLLGGTIVR 356 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV----------VWRGAERTKPTPPE 394 + + ++ R + I GD + + AG+ IP + V V++ +ER Sbjct: 357 KATLHNIDRIAQLGICIGDTVTIRKAGEIIPEVIRVLKTLRHHKTKVFQISERCP----- 411 Query: 395 NRFNSLTCYFASDV--------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 + NS+ F+++ C L+ ++ + + G+GE L Sbjct: 412 -KCNSMLVSFSNEAVVRCINNSCPAILKGNLIHWSSRDAVDISGLGEKIIDLLISNGLVN 470 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP---LTRAALNA 503 I L +++ N + + L ++ + +T+ + +GI T A L Sbjct: 471 SISDLYHLNFQEVSNLERMGIKSAENLIKSIESSKTKSWTKVLYGLGIHHVGYTTAILLT 530 Query: 504 SDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWL 550 + S QLL + + G G A + W + +KL S L Sbjct: 531 ENFSSVQQLLQAPYDTLVTIKGIGKEVAYSIRSWFSLEENQKLISEL 577 >UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD Length = 669 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 131/568 (23%), Positives = 236/568 (41%), Gaps = 74/568 (13%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP--- 86 ++EI RL+ IK+W+ +Y+ + V D YD+ RL + + E + + P Sbjct: 5 VEDEILRLKNIIKRWNREYYVDSSPSVGDLTYDKALLRLQDLESKY-PEYKTLDSPTFRF 63 Query: 87 ----LNG--AVMHPVAHTGVRKMVDKNALSLWMRE----------RSDLWVQPKVDGVAV 130 LN V H + K D LSLW+ + + + V+PK+DG ++ Sbjct: 64 GSDLLNDFEEVKHSFPILSLDKTYDIKGLSLWIEKMVLESAISGLHTGISVEPKIDGCSI 123 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH-- 188 L Y+DG L KA++RG+G G D T+ V I VP + + L+GEI++ +E Sbjct: 124 VLHYKDGILEKALTRGDGRVGNDVTENVKTIRNVPLRIDEKIE-LVLRGEIYITKENFLK 182 Query: 189 IQQQMGG--INARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLMS------DRLKEL 239 I + + +NAR +G++ R + N L +FV+ ++ D+LK+ Sbjct: 183 INRTLKNPYVNARNLASGILRRISSKEVANFPLDIFVYDILYSSLKLNTSHDAFDKLKQF 242 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVV-------VRAAKEPESRH 291 + + A +A V+ E + + DGVV +R S H Sbjct: 243 GFKVNPFCEFFGGKNLEAGIIAHVKKIEALRDSFEYEIDGVVLKIDSFILRKILGSTSHH 302 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 +W +A+K++ +++V I VG+SGKI+ VA + V++ + ++ + Sbjct: 303 -----PKWSIAYKFESCTGMSKVVDIVVQVGRSGKITPVAHVEKVLVAGASITNASLHNQ 357 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC--------- 402 + GD +++S G IP +D V+ + A + P N +C Sbjct: 358 DYIDFVGLNVGDIVVISRRGDVIPAVDLVIEKLAVGSFKIPS----NCPSCKMTLIKEGA 413 Query: 403 --YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 + + C + I ++ + +K+ + + G+ E L + ++L Sbjct: 414 HLFCVNRHCSCRIIEQVKYFCSKKCMNIVGLSEKTIEFLFEKKFISSEVELYTFNCDRLI 473 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP---------LTRAALNASDERSWSQ 511 N G + L ++ +PF + ++ MGI L LN+ D + S Sbjct: 474 NLKGFNLKRINNLKRSIEDSKSRPFRKLLLGMGIKDLGENTILVLINNNLNSFD--TIST 531 Query: 512 LLFSTEQFWQQL---PGTGSGRARQVIE 536 L + E +L G G A +IE Sbjct: 532 LCKNKEAALAKLLKIKGIGERIALNIIE 559 >UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_HALWD Length = 736 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 119/508 (23%), Positives = 219/508 (43%), Gaps = 47/508 (9%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-----GSEPRDVMM 84 A E+ ++L++ I++ D Y+ + D YD L RL + F S R V Sbjct: 74 AVEQATQLREAIREHDYQYYIRASPIIADRAYDILFDRLQALEDIFNLDTEASPTRRVGG 133 Query: 85 PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD----------LWVQPKVDGVAVTLVY 134 PL+ + V H +D++ +R+ + +PK DG++V ++Y Sbjct: 134 EPLDE--LETVEHVTSMLSIDQSTAVDSVRDFDERVRDVVGDLEYICEPKFDGLSVEVIY 191 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS-TLQGEIFLQREGHIQQQM 193 DG+ +A +RG+G +G+D T +V + AVP + G + ++GE+++ + G + Sbjct: 192 EDGEYIRAATRGDGNRGDDVTAQVETVGAVPLKLHGDYPSYLAVRGEVYMPKAGFREYNR 251 Query: 194 GGI--------NARAKVAGLMMRQDDSDTL--NSLGVFVWAWPDGPQLMSDR---LKELA 240 I N R AG +RQ D + L F + D +L D+ L +L Sbjct: 252 ERIECDEKPFANPRNAAAG-TLRQLDPGVVAERPLSCFFYDILDATELPPDQWTTLNDLQ 310 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHWLPGQAE 298 + G +R V + D+ R++ +AEL + DG V++ + +R L + Sbjct: 311 SWGLRTNDRISR-VDSIDDAIAYRDQLKAARAELNYEIDGTVIKV-NDRGNREILGATSR 368 Query: 299 ---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W A+K+ P A++ + I VG++G+++ VA L PV + V R ++ + + Sbjct: 369 SVRWAFAYKFPPRAEITHITDIVVQVGRTGRLTPVALLDPVDVGGVTVSRASLHNPEEIK 428 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE--------NRFNSLTCYFASD 407 + GD++ V AG IP + +V + A T P + + L Sbjct: 429 RLSVNSGDEVRVRRAGDVIPEVAEVTQKRATGTFNFPNQCPICHSSVEQDGPLAFCTGGL 488 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK 467 C Q + +V G++ L +DG+GE L ++ + L+ L G Sbjct: 489 TCDAQLVRTIVHYGSRSALDIDGLGEQRVEQLVESGVIGELADLYTLSVADLSKLDGWGT 548 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIP 495 + + L + + T +++ +GIP Sbjct: 549 TSAENLIQAISETQTPSLTDFLVGLGIP 576 >UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=DNLJ_THEYD Length = 670 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 140/572 (24%), Positives = 232/572 (40%), Gaps = 62/572 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG---------- 76 P ++EI +L +++ + Y+ + D YD + RL + + +G Sbjct: 5 PEDIKKEIEKLVKELNYHNYRYYVLDSPVISDEEYDMMLRRLKELEEKWGYILPDSPTQR 64 Query: 77 -----------SEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKV 125 +E R+ M+ N + + R + L E + V+PK Sbjct: 65 VGAAPSEKFEKAEHREPMLSLDNAFSIEEL-----RDFDARVKRLLGSSEEVEYTVEPKY 119 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----PLANSTLQGEI 181 DG+AV L Y+DG L KA +RG+G GED TQ + I A+P + G P ++GE+ Sbjct: 120 DGLAVELSYKDGLLYKASTRGDGYVGEDITQNIKTIKAIPLRIEGVDKIP-EEIDIRGEV 178 Query: 182 FL-----QREGHIQQQMGG---INARAKVAGLMMRQDDSDTLNS---LGVFVWAWPDGPQ 230 +L +R + + G N R +G + + D S T + + + + G + Sbjct: 179 YLNIDEFERINKERIEKGEPVFANPRNAASGSVRQLDPSITASRRLYMSCYGIGYVKGIE 238 Query: 231 LMSD-RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVRAAKEP 287 S E G Y + K +EV E K PF TDG VV+ Sbjct: 239 FKSQIEFIEWLKKGRFPVPAYVKLAKGIEEVIEAIKEIEKLRQGYPFETDGAVVKVNSFE 298 Query: 288 ESRHWLPGQAE--WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 R E W +A+KY + ++K I +VG++G I+ VA L PV + V R Sbjct: 299 LQRKLGTKTREPRWAIAYKYPAHQGITKLKDILASVGRTGVITPVAVLEPVKIGGVTVSR 358 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPEN--RFNSLT 401 + + + DI GD ++V AG+ IP I VV R E + PE+ S T Sbjct: 359 STLHNWDEVERKDIRVGDYVIVERAGEVIPHIIGVVKDRRTGEEKEVKIPEHCPVCGSKT 418 Query: 402 CYFASDV--------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 +V C Q R+ +++ + ++G+G+ LH +H Sbjct: 419 VREPGEVAVKCINFNCPAQVEERIKHFASRRAMNIEGLGDKTVELLHNKGIIKHFVDLYK 478 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWS 510 L E ++ PG A+ S +L ++K +R + A+GI + L A R Sbjct: 479 LRQEDIKGLPGFAELSSKKLIEAIAKSKKTTLSRLLYALGISQVGEYASKLLAQHFRKLE 538 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 L + Q+P G A+ + ++ N + Sbjct: 539 DLYHIKAEKLVQIPQIGEKTAKTIEQFFNNEE 570 >UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_LACH4 Length = 668 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 127/517 (24%), Positives = 227/517 (43%), Gaps = 61/517 (11%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS--EPRDVMMPP 86 A++E + L+ ++ +W D Y+ + EVED VYDQ RL + ++ F P D + Sbjct: 8 EAKKEAASLRTKLDEWADAYYSKDAPEVEDNVYDQSYNRLLELEKAFPEIVTP-DSITQR 66 Query: 87 LNG-------AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQP-------KVDGVAVTL 132 + G V HP+ + + K+ L + + L P K+DG++++L Sbjct: 67 VGGEIDSDFTKVNHPIPMLSMGDVFSKDELKEFDQRMQKLVGHPVEYNVELKIDGLSLSL 126 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG----H 188 Y+DGKL +A +RGNG GED T I+ +PQ + PL ++GE ++ +E + Sbjct: 127 EYQDGKLVRASTRGNGYIGEDVTANARYIADIPQVLPEPLT-IEVRGECYMGKEAFAKLN 185 Query: 189 IQQQMGGI----NARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQLMS------DRLK 237 +++ G+ N R AG + + D T L F++ W + P+ ++ +R+ Sbjct: 186 QEREDEGLSVFANPRNAAAGSLRQLDPKVTKKRQLSTFIYTWVNPPREITSQHQAIERMH 245 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPESRHWLPG 295 EL GF +T R + N DEV +E+ + L + DG+V++ + S G Sbjct: 246 EL---GFHTNET-GRKLANLDEVFDFIDEYTAKRNSLTYGIDGIVLKV--DDLSLEQQLG 299 Query: 296 QA----EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W +A+K+ P Q V+ I + VG++G ++ A + PV L V R ++ + Sbjct: 300 NTVKVPRWEIAYKFPPEEQETIVRDIVWTVGRTGVVTPTAVMDPVQLAGTTVARASLHNP 359 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAER-------TKPTPPENRFN---- 398 E + GD + + AG IP I +VV R A+ T P+ + + Sbjct: 360 DYLNEKGVRIGDTVKLHKAGDIIPEISEVVLSKRPADSVPYEIPTTCPSCGQKLVHLEDE 419 Query: 399 -SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 +L C S C Q ++ ++ + + G+G + L ++ LT + Sbjct: 420 VALRCINPS--CPAQVEEGIIHFASRPAMNIAGLGPKIVKQLIAKDLVHNVADLYHLTED 477 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 L + L + ++K + +GI Sbjct: 478 DLAQLDHFKEKSINNLLTAIDNSKKNSVELLITGLGI 514 >UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=DNLJ_MYCA5 Length = 665 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 114/488 (23%), Positives = 223/488 (45%), Gaps = 81/488 (16%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS----------- 77 + + E+ LQ +I +WD+ Y+ VED +YD+ +L + + + S Sbjct: 6 KIRNEVFELQAKINEWDNAYYNLDAPLVEDAIYDREILKLKKLEEQYSSYFSFEELANSP 65 Query: 78 -EPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAV 130 + + L V H + K + + ++ +++PK+DG+++ Sbjct: 66 TQKINAKSSDLFKKVTHDSPMLSLNKAYTEEEIQKFIDNIKKVTPTFSFFLEPKIDGLSI 125 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--GPLANSTLQGEIFL----- 183 ++ YR+G+L +A++RG+GL GED T+ + I +P+ ++ PL ++GE++L Sbjct: 126 SIKYRNGQLFQAVTRGDGLVGEDVTENIKQIKNIPKEIAYQKPLE---VRGEVYLALSEF 182 Query: 184 -QREGHIQQQMGGI--NARAKVAGLMMRQDDSDTLN-SLGVFVW--AWPDGPQLMS---- 233 + + Q++ + N R AG + + D N +L F++ P+ + + Sbjct: 183 EKINLNFQKENKPLMANPRNAAAGTLRQLDKEIVANRNLSAFLYNIVAPEDHNIFTILEA 242 Query: 234 -DRLKELATAGFTLTQTYTRAVKNADEV-ARVRN-EWWKAELPFVTDGVVVRAAKEPESR 290 D LK L GF++T+ T A K+ E+ + + N + K L + TDGVV++ E + Sbjct: 243 RDFLKNL---GFSVTKEATYA-KDLSEINSYIENFKHLKKTLDYETDGVVIKL---NELQ 295 Query: 291 HW--------LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 H+ P A +A+KY+P +K I VG++G ++ A L PV+L Sbjct: 296 HYDALGATNKFPHSA---IAFKYEPNTTTTVLKNIFITVGRTGLVTYNAELEPVILSGSC 352 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC 402 + + + + ++ + GD + + AG+ IP + +V + E T+ N+F L C Sbjct: 353 ITFATLNNYQYIKDLKLNKGDLVYIKKAGEIIPCVIGLVNKKHEETEF----NKF--LKC 406 Query: 403 -YFASDVCQ-----EQFIS----------RLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 Y SD+ + EQ+ S +++ +K+ + L+ +GE E Sbjct: 407 PYCNSDLIETDTLLEQYCSNENCPEIRRKKIIHFASKKAMELNSLGEKNIDVFINEGLLE 466 Query: 447 HIFSWLLL 454 ++ + L Sbjct: 467 NVIDFYKL 474 >UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP Length = 656 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 130/514 (25%), Positives = 214/514 (41%), Gaps = 57/514 (11%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP-- 86 + ++EI L+ +I ++ Y+ +E+ D YD L ARL ++ + D P Sbjct: 3 KIKKEIEDLRSKINYHNNLYYNLDNAEISDAEYDGLYARL-KFLEAMNPDYADAASPTQK 61 Query: 87 LNGA---VMHPVAHTGVRKMVDKNALS---LWMRERS---------DLWVQPKVDGVAVT 131 + GA V V H +D S L ER ++ + K+DGV+ + Sbjct: 62 IGGAASRVFTSVTHASQMMSLDNTYSSEEVLRWHERCVKSLGHGNFEMVAEAKIDGVSCS 121 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST-LQGEIF-----LQR 185 L Y G L A +RG+G GED T + I +P +S N ++GEI+ L+R Sbjct: 122 LTYEGGVLTVAATRGDGKTGEDVTANIKTIKTIPHNIS--FKNKIEIRGEIYIEKADLKR 179 Query: 186 EGHIQQQMGG---INARAKVAGLMMRQDDSDTLNS--LGVFVWAWPDGP---QLMSDRLK 237 IQ+ G N R AG +RQ +++ S L F ++ G + ++ + Sbjct: 180 LNEIQENEGENIFANTRNAAAG-SIRQKNAEISASRPLKFFAHSFGYGDVDVKGFAEFMD 238 Query: 238 ELATAGFTLTQTYTRAVKNADEVARV--RNEWWKAELPFVTDGVVVRAAKEPESRHW--L 293 + GF++T R + +E+ R E +A LP+ DG+VV+ E + Sbjct: 239 LCKSWGFSVTPNRIRTA-DINEITSFYKRFEELRAGLPYDVDGIVVKINSFAEQKILGVT 297 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W +A+KY+P V I F+VG++G I+ VA L PV + + + + Sbjct: 298 AKSPRWAIAFKYKPPQGKTVVNKIIFSVGRTGIITPVAELEPVAVAGVIISNATLHNFDE 357 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC----YFASD-- 407 + + GD ++V AG+ IP+I +VV G P N +C Y D Sbjct: 358 IKRLGVKEGDTVIVERAGEVIPKILNVVKDGGGNEVKAPK----NCPSCGSKVYRYEDEV 413 Query: 408 -------VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 C Q L+ ++ + +DG GEA + + + L EQL Sbjct: 414 AIRCINPACPAQIKGHLLHFVSRAAMDIDGFGEAVVEQVVEKKYVKDFADIYNLKAEQLL 473 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 K L ++K+ +R + A GI Sbjct: 474 TLDLFKDKKVNNLLLAVEASKKRSLSRVLYAFGI 507 >UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI Length = 675 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 139/568 (24%), Positives = 236/568 (41%), Gaps = 65/568 (11%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEP 79 +PA A + I+ L++QI++ D Y+ E+ D YD+L L ++ S Sbjct: 9 APADAAQRIAELREQIRRHDYCYYVLDAPEISDAEYDRLMRELLDLEQSHPELVTADSPS 68 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERS-------DLWVQPKVDGVAV 130 + V PL AV H V + VD L + R V+PK+DG+ V Sbjct: 69 QRVGGQPLAAFRAVSHRVPLLSLANAVDDQDLREFDRRARERADRPLTYVVEPKIDGLTV 128 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ 190 L Y +G+ +A +RG+GL GED T+ + + AVP + + + ++GE +L + + Sbjct: 129 VLSYEEGRFIRAATRGDGLIGEDITENIKTVRAVPLRLKRDIKSLEVRGEAYLPKAAFAR 188 Query: 191 --------QQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAW-------PDGPQLMSDR 235 + N R AG +RQ D S + + + DG + Sbjct: 189 LNEEREEAGEAAFANPRNAAAG-SLRQLDPKVTASRPLRAYFYNILHLEGADGVGEQVEA 247 Query: 236 LKELATAGFTLT--QTYTRAVKNADEVARVRNEWW---KAELPFVTDGVVVRAAKEPESR 290 L+ L G + + Y R + + + R +W + +LP+ DG+VV+ + + Sbjct: 248 LQMLEDLGLPVNPERRYCRTIDDVIDYCR----YWTEHRHDLPYEIDGMVVKVNE--LDQ 301 Query: 291 HWLPGQA----EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 + L G+ + +A+K+ P + V+ I VG++G I+ A L PV L V R Sbjct: 302 YPLLGETAKSPRYAIAFKFPPEQAITRVRDITVKVGRTGVITPTAELEPVRLAGTTVSRA 361 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTP--------PEN 395 + + +E DI GD +++ AG IP + V+ G ER P P + Sbjct: 362 TLHNEDIIRERDIHIGDYVVIQKAGDIIPEVLSVLKEKRTGEERPFFMPQTCPECHSPVS 421 Query: 396 RFN---SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 R ++ C S C Q L+ ++ + ++G+G A L + Sbjct: 422 RLKGEAAIRC--TSLACPAQAKEGLIHFASRDAMNIEGLGPAVVNLLWEAGLVRDPADLY 479 Query: 453 LLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL---TRAALNASDERSW 509 LT EQ+ + K +A L ++ + + A+GI L T A A S Sbjct: 480 DLTAEQVAPLERMGKKSAANLIAAIENSKSRGLAALIFALGIRLVGQTAAKTLARHFGSM 539 Query: 510 SQLLFSTEQFWQQLPGTGSGRARQVIEW 537 QL+ +T + Q + G A + W Sbjct: 540 DQLMKATTEELQAVSEIGPKMAESLQRW 567 >UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0G8_ACIFD Length = 664 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 144/561 (25%), Positives = 235/561 (41%), Gaps = 59/561 (10%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQ------RCFGSEPRDVM 83 A ++ L+ I++ + Y+ + D +D L L + R S V Sbjct: 5 AAARVAALRSLIQRASEAYYVADDPIMSDDEFDGLVLELRALEAAHPELRSPDSPTERVG 64 Query: 84 MPPLNGAVMHPVAH----TGVRKMVDKNALSLWM-RERSDLWVQP------KVDGVAVTL 132 PP G+ PV H + + D + L W+ R R L P K+DG+A++L Sbjct: 65 APP--GSSFAPVRHRTPMLSLDNVFDADELDAWVERTRRGLGHDPALFFELKIDGLALSL 122 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVP---QTVSGPLANSTLQGEIFLQREG-- 187 Y DG+L +A +RG+G GED T ++ A+P + V+GP ++GE+FL R Sbjct: 123 TYVDGRLAQAATRGDGEVGEDVTANALVVDAIPRRLKGVTGP-GLVEVRGELFLPRSAFR 181 Query: 188 ----HIQQQMGGINARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQL--MSDRLKELA 240 +++ N R AG + ++D + T + L F + +GP + L+ L Sbjct: 182 ALNERVERPFA--NPRNAAAGSLRQKDPALTRDRGLSFFAYQLEEGPSFDYHHEALQWLG 239 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWWKAE----LPFVTDGVVVRAAK-EPESRHWLPG 295 GF + T DE+A W AE L + DG V++ + E R Sbjct: 240 EVGFQVEAHATPV--GLDELAD--KLAWLAEARDGLDYDIDGAVIKVDRLEDRVRLGTTT 295 Query: 296 QA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 A W++A+K+ + + I+ +VGKSGK++ A L PV + V R + + + Sbjct: 296 HAPRWMIAYKFPAEERPTRLVGIEVSVGKSGKVTPFAVLDPVRVGGSTVSRATLHNADQI 355 Query: 355 QEWDIAPGDQILVSLAGQGIP---------RIDDVVWRGAERTKP---TPPENRFNSLTC 402 D+ GD ++V AG+ IP R DD V T P TP + Sbjct: 356 ARLDVRVGDTVIVRRAGEVIPEVVRPVLELRPDDAVPWVFPTTCPVCHTPLVRDRGEVDW 415 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNT 462 + C EQ + RL+ ++ + +DG+GE R L + LT + L Sbjct: 416 RCPNRRCPEQLVQRLIHFASRDAMDIDGLGEQRARQLVEAGLVVVPPDLYRLTDDDLARL 475 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 PG+ +L +R +P R + A+ I L A S S L TE Sbjct: 476 PGVRHRSIERLRAGIEASRSRPLGRVIFALAIDNVGQHVGMLVADVVGSLSGLRTVTEDE 535 Query: 520 WQQLPGTGSGRARQVIEWKEN 540 ++ G G A V+ ++++ Sbjct: 536 LCRVEGIGPVVAASVVAFRDS 556 >UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=DNLJ_AKKM8 Length = 794 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 135/538 (25%), Positives = 229/538 (42%), Gaps = 78/538 (14%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG--SEP----RDVM 83 A I L+ ++++ + Y+++ + E+ D YD L L + ++ S+P R V Sbjct: 45 AHRRIDYLRSELRRHNRLYYEQAEPEISDAEYDALFLELEKLEKAHPELSDPDSPTRRVG 104 Query: 84 MPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLW---------------VQPKVD 126 PL G + H V + + ++ + E ++ + V+PK+D Sbjct: 105 GAPLQGFNQIRHAVPMLSIDDIFEQRDAPVPDEELAEFYHKLSRALQTENVPVSVEPKID 164 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQ 184 GVA++++YR+GKL A +RG+G G+D T V I +VP T+ P A L+ GE+F+ Sbjct: 165 GVALSIMYRNGKLAYAATRGDGDVGDDVTANVRTIRSVPLTLP-PGAPPVLEVRGEVFMP 223 Query: 185 REG----HIQQQMGGI----NARAKVAGLMM----RQDDSDTLNSLGVFVWAWPDGPQL- 231 E + ++ G+ N R AG + RQ + L L + A+ +GP+L Sbjct: 224 NEAFAKLNEERDADGLPAFANPRNATAGTLKQLDPRQVAARPLAFLAHGLGAY-EGPELR 282 Query: 232 -MSDRLKELATAGFTLTQT--YTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPE 288 D L G + YT ++++ + R + + LP+ TDG V++ + Sbjct: 283 DAKDFWNMLRHCGIPCNEPVYYTDSLESTRQAVR-DIDRLRHTLPYGTDGAVIKISST-A 340 Query: 289 SRHWLPGQA---EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 +R L A W A+K+ P + + I VG++G ++ VA L PV+L V R Sbjct: 341 TREALGATARAPRWAAAYKFPPEQKETTLLNIVVQVGRTGVLTPVAELQPVLLSGSTVAR 400 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI----------DDVVWRGAERTKPTPP-- 393 + + D+ GD +LV AG+ IP + D + E TK P Sbjct: 401 ATLHNQDEIDRKDVRIGDTVLVEKAGEIIPAVLKVNLSKRPQDARPYSILEATKGLCPAC 460 Query: 394 -------ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 E + F C Q ++ + ++ L ++ IG + AL + Sbjct: 461 GNPIMKEEGKVAWRCTNF---TCPAQAVTGITHFCSRSALDVESIGSSVAEALRSSGLAS 517 Query: 447 HIFSWLLLTPEQLQN----TPG----IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 L P+QL N TP + + + AR P RW++A GIPL Sbjct: 518 SALDLFSLMPDQLANLNLGTPEEPRRYGEKNARKALDALQNARGLPLERWLIAFGIPL 575 >UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=DNLJ_BUCCC Length = 587 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 126/570 (22%), Positives = 244/570 (42%), Gaps = 67/570 (11%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAV 91 +I +LQ QIK + Y + D +YD+L +L Q ++ + + L V Sbjct: 6 NQILKLQLQIKYHNYMYHTLDSPIISDILYDELYNKLLQLEKLYFKKKSLDKKIKLLDQV 65 Query: 92 -----------MHPVAHTGVRKMVDKNALSLWMRERSDLW---------VQPKVDGVAVT 131 H + +R + + + L+ ++ + + K DG+AV Sbjct: 66 GAKKLHIFTEFFHKIPMLSLRSINNISDFDLFDKKIKEYFKHINVITYFCDFKFDGLAVN 125 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQR-EGH 188 L Y++G L A +RGNG GE+ T+ + +IS++P+ ++G ++ GEIF+++ + Sbjct: 126 LFYKNGILISASTRGNGSVGENITKNILMISSIPKKIAGSNIPKKIEIRGEIFMRKSDFF 185 Query: 189 IQQQMGGI-------NARAKVAGLMMRQDDSDTLNS--LGVFVWAWP--DGPQLMSD--- 234 I Q + N R AG +RQ + + + L FV+ + D + + Sbjct: 186 ILNQSCKLSGKKEFSNPRNAAAG-SVRQLNPEIVKKRKLNFFVYGFGLFDYNKKIDSHYQ 244 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWK--AELPFVTDGVVVR--AAKEPESR 290 RL ++ GF L + Y KN EV + K ++L F DG+V++ + K + Sbjct: 245 RLLQIKKWGFPLYKNYC-VCKNKKEVIHFYHYANKIRSQLDFEIDGIVIKLDSIKLQNNL 303 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 + +W +A K+ + + ++ I F VG++G I+ VA P+ L + + ++ + Sbjct: 304 GCIEKYPKWAIALKFFSLDKETKIFKISFKVGRTGIITPVAYFFPINLFGVSISKASLYN 363 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK-----PTPPENRFNSL----- 400 ++ + DI D + V AG IP+I +V+ + PT + L Sbjct: 364 IKTIKLLDIRLHDYVTVYRAGDVIPKIRNVLIHKRNKYTQKIIIPTYCPSCCTKLIFSDD 423 Query: 401 --TCYF-ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 TCY AS C Q + RL++ +K L G+G+ L + LT + Sbjct: 424 LKTCYCPASFSCFSQNVKRLIYFSSKNGLNFKGLGKKNIIKLINYGYLYTPIDFFSLTVK 483 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTE 517 +L+N + S ++ +++ +++ ++GI + S + + S E Sbjct: 484 KLKNIFRMGDKLSEKIIKNIAFSKRVSLDKFICSLGI----FGVGTSIAKRLAYYYRSVE 539 Query: 518 QFWQ-------QLPGTGSGRARQVIEWKEN 540 +F+ ++ G + +I + +N Sbjct: 540 KFFNTNYDTLSKIDHIGYNISNAIISFLKN 569 >UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHM5_9BACT Length = 667 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 131/562 (23%), Positives = 239/562 (42%), Gaps = 66/562 (11%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMH 93 I RL+ +I+ + Y+ K E+ D YD L L + + + + G+ + Sbjct: 10 IDRLRAEIEHHNRLYYTLAKPEISDYEYDMLVKELQELEAQYAEGAVEESPTQKVGSDLT 69 Query: 94 PVAHT---GVRKMVDKNALSL------WMRERSDL------WVQPKVDGVAVTLVYRDGK 138 P A T VR +NA SL R +DL + K+DG ++ L Y +G Sbjct: 70 PGAKTIPHKVRMASLENAYSLEEVLAFINRTNNDLGYASEYCAELKIDGFSINLYYENGN 129 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL-----------QREG 187 A +RG+GL+GED T+ L+ VP T+ A ++GEI++ +RE Sbjct: 130 FIYATTRGDGLEGEDVTENFRLLPDVPFTIDYKGA-IEIRGEIYIPVQDFLALNEFRREN 188 Query: 188 HIQQQMGGINARAKVAGLMMRQD-DSDTLNSLGVFVWAWPDGP-----------QLMSDR 235 ++ NA A L R++ S L +L + + + P + D Sbjct: 189 ELKTFANPRNAAAGSIKLKSREEVKSRHLKAL-FYALGYYETPLQYKNEIIDKQTRLLDF 247 Query: 236 LKELA--TAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRH-- 291 L EL T+ TL + Y A K ++ E + +P+ DG+V++ + + Sbjct: 248 LDELGFPTSKRTLCKHYQEAEKFC-----LQMEQERYTIPYDIDGIVIKVNSLEDQKKLG 302 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W +W +A+K++P + ++++ F VG++G ++ VA+L PV + V + + Sbjct: 303 WTAKSPKWAIAYKFKPEEKETVLESVSFQVGRTGAVTPVANLKPVFISGSTVSHATLHNA 362 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKPT-----------PPENRFNS 399 + D+ GD +LV +G+ IP+I V V + KP P + + Sbjct: 363 DEIKRLDLHYGDTVLVVKSGEIIPKILSVNVSKRPVNAKPVIFPATCPVCNAPLQRDEDG 422 Query: 400 LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 Y + C Q +L +++ + + G+G + L +T + + I L ++ Sbjct: 423 SINYCPNANCPAQIQRKLEHFASREAMDIYGLGSSLIARLIETGQIKWIPDIYHLDYNKI 482 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI----PLTRAALNASDERSWSQLLFS 515 + K + L ++ + F R + A+GI +T L A ++ L+ + Sbjct: 483 AEMERMGKKSADNLQKAIEASKTKNFDRVLFALGIRHIGSITARTL-AQHFKNIDALIMA 541 Query: 516 TEQFWQQLPGTGSGRARQVIEW 537 E+ +P GS AR +I + Sbjct: 542 KEEELLSVPDIGSIIARSIIGF 563 >UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 Length = 676 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 125/566 (22%), Positives = 236/566 (41%), Gaps = 73/566 (12%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA 90 ++EI L+ I++W+ +Y+ + V D YD+ RL + + E + + P L Sbjct: 14 EDEILCLRDNIRKWNKEYYVDSSPSVSDLTYDKALLRLQDLESKY-PEYKTLDSPTLKFG 72 Query: 91 ---------VMHPVAHTGVRKMVDKNALSLWMRE----------RSDLWVQPKVDGVAVT 131 V H + K D L LW+ + + + V+PK+DG ++ Sbjct: 73 SDLLNNFEEVTHSFPILSLDKAYDIKELLLWIEKMVLEGSSLGSYTGISVEPKIDGCSIV 132 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH--I 189 L Y+DG L KA++RG+G G D T+ V I VP ++ + L+GEI++ +E I Sbjct: 133 LYYKDGILQKALTRGDGRVGNDVTENVRTIKNVPLSIDEKVE-LVLRGEIYITKENFLKI 191 Query: 190 QQQMGG--INARAKVAGLMMRQDDSDTLNS-LGVFVWAW---PDGPQLMSDRLKELATAG 243 + +NAR +G++ R + + + L +FV+ G D +L G Sbjct: 192 NHTLKNPYLNARNLASGILRRINSREVASFPLDIFVYDILYSSFGLSTNHDAFDKLKKFG 251 Query: 244 FTLTQTYTRAV--KNADEVAR--VRNEWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQA 297 F + + + KN +E+ + E + L + DGVV++ + + Sbjct: 252 FKI-NPFCKFFGGKNLEEITNHVKKIEMQRNSLEYEIDGVVLKVDSFILRDILGYTSHHP 310 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 +W VA+K++ V+++ I VG+SGKI+ VA + V + + ++ + Sbjct: 311 KWSVAYKFESCTGVSKIVDIVVQVGRSGKITPVAHVEKVFVAGAFITNASLHNQDYIDSI 370 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTPPENRF------NSLTCYFASDV 408 + GD + +S G IP ++ VV + G+ + P + + L C + Sbjct: 371 GLNVGDVVAISRRGDVIPAVELVVEKLSIGSFKISSNCPSCKMALIKEGSHLFC--VNKH 428 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKS 468 C + I ++ + +K+ + + G+ L + ++L N G Sbjct: 429 CPYRIIEQIKYFCSKKCMNIVGLSGKTIEFLFEMKFISSEIELYTFNFDRLINLRGFDLK 488 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIP---------LTRAALNASD---------ERSWS 510 + L + ++ +PF + ++ MGI L LN+ D E + + Sbjct: 489 RIDNLKRSISDSKGRPFRKLLLGMGIKELGANTILVLINNNLNSFDIISTLCKNKEAALA 548 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIE 536 +LL ++ G G A +IE Sbjct: 549 KLL--------KIKGIGEKIALNIIE 566 >UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT Length = 678 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 136/561 (24%), Positives = 238/561 (42%), Gaps = 66/561 (11%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP--LNGA 90 +I L +I D Y+ + E+ D YD L L + + E + V P + G Sbjct: 9 QIDNLIDKINYHSDKYYNQDTPEISDFEYDMLMKELIKLE-AENPEFKRVDSPSNRVGGM 67 Query: 91 VMHP---VAH-------TGVRKMVDKNALSLWMRERSD----LWVQPKVDGVAVTLVYRD 136 + V H + D +RE +D V+ K+DG++V + Y + Sbjct: 68 ALDKFDQVTHKNPMLSLSNAYSAEDLRDFDRRVREMTDGDVEYVVEFKIDGLSVGITYEN 127 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG--------- 187 G+ A +RGNG+ GED ++ V I ++P + ++GE+++ +E Sbjct: 128 GEFKSAATRGNGIIGEDISKNVMTIKSIPLKIDDK-REIIVRGEVYISKENFEKVNEYQE 186 Query: 188 -HIQQQMGGINARAKVAGLMMRQDDSDTLNS--LGVFVWAWP-----DGPQLMSDRLKEL 239 H Q N R AG +RQ DS L +FV+ DG SD L+ L Sbjct: 187 EHDLQIFA--NPRNLAAG-SLRQLDSKLTAKRPLDIFVFNLENINELDGIDTHSDSLEYL 243 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWW---KAELPFVTDGVVVRAAKEPESRHWLPGQ 296 GF++++ Y + K+ DEV E+W + L F DG+VV+ E R+ + Sbjct: 244 KKLGFSVSENY-KICKSIDEVIEFI-EYWTENRGSLKFDIDGMVVKV-NNIEQRNEMGFT 300 Query: 297 AE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 A+ W +A+K+ + +++ I+ VG++G I+ A L PV L V R + + Sbjct: 301 AKSPRWAIAYKFPAERKKSKILDIEVEVGRTGTITPTAILEPVRLAGTSVSRATLHNEDF 360 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTP--------PENRFN---S 399 +E DI D ++V AG IP+I +VV G E+ P P R + Sbjct: 361 IREKDIKLFDHVIVQKAGDIIPQIVEVVKEDRTGDEKDFVMPSVCPECGEPTVRLEGEAA 420 Query: 400 LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + C S C Q ++ +++ + +DG+GE+ + + + L EQ+ Sbjct: 421 VKCINIS--CPAQIRRGMIHFVSREAMDIDGMGESIITLFLKEGLIKDVSDIYYLKKEQI 478 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQLLFST 516 + + + L ++ R + +GI A + AS+ S +++ + Sbjct: 479 VPLERMGEKSADNLIKAIEKSKSNDLWRLINGLGIRFVGVKGAKILASNFSSLDEIINAD 538 Query: 517 EQFWQQLPGTGSGRARQVIEW 537 + QQL GS + V+++ Sbjct: 539 VERLQQLEEFGSIMSESVVKF 559 >UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 Length = 677 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 122/541 (22%), Positives = 222/541 (41%), Gaps = 97/541 (17%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF----------- 75 PA+ Q+ I RL+Q+I + Y+ + + D VYD+L L + ++ + Sbjct: 7 PAKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQ 66 Query: 76 --GSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLW---MRERSDL------WVQPK 124 G+EP V P V H + + + D+ L + +R+R L +PK Sbjct: 67 RVGAEPLKVFEP-----VHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPK 121 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS--TLQGEIF 182 +DGVA++L+Y +G+L +A +RG+G GE+ TQ I++VP + G ++GE+ Sbjct: 122 MDGVALSLLYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVL 181 Query: 183 LQREGHIQ-----QQMGG---INARAKVAGLMMRQDDSDTLNSLGVF------VWAWPDG 228 + REG + ++ G N R +G + + D T +F + D Sbjct: 182 MPREGFAKFNREAEKRGDKTFANPRNAASGSLRQLDPRITAKRPLIFYGYLIGLLKGKDF 241 Query: 229 PQLMSDRLK-----------ELATAGFT--LTQTYTRAVKNADEVARVRNEWWKAELPFV 275 P+ D LK E+ G Y VK + ++PF Sbjct: 242 PKNHCDVLKWFKDWGIPVISEIKVVGGIEGCLDYYEHLVKT------------REKMPFD 289 Query: 276 TDGVVVRAAKEPESRHWLPGQAE---------WLVAWKYQPVAQVAEVKAIQFAVGKSGK 326 DG+V++ + L QAE W +A+K+ ++ VKAI+F VG++G Sbjct: 290 IDGIVIKV-------NSLQVQAELGFVSRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGA 342 Query: 327 ISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPR-IDDVVWRGA 385 ++ VA L PV + V + + D+ GD ++V AG IP + ++ + Sbjct: 343 VTPVARLEPVSVSGVTVSNATLHNFDELYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRP 402 Query: 386 ERTKPTPPENRF------------NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGE 433 ++ K +R ++ C+ Q + +++ L ++G+G+ Sbjct: 403 KKAKLIKIPSRCPVCHAEVIKPEGEAVARCVGGLYCRAQLRESIKHFASRRALDIEGLGD 462 Query: 434 AGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMG 493 Q + I L + P + + + L ++K R++ A+G Sbjct: 463 KLVELFIQEKLIKDITGIYQLKKSAITALPRMGEKSAENLLTAIEKSKKTTLPRFLYALG 522 Query: 494 I 494 I Sbjct: 523 I 523 >UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID=C2M9J9_9PORP Length = 679 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 140/583 (24%), Positives = 240/583 (41%), Gaps = 84/583 (14%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM 84 +P + EI +L++ I+Q + Y+ + + D YD L RL + E D Sbjct: 1 MTPNSTELEIEQLRKTIEQHNRAYYLDNAPTISDADYDALMQRLLTLE-AEHPEFADPTS 59 Query: 85 PPL------NGAVMHPVAHT----GVRKMVDKNALSLWMRERSDL-------WV-QPKVD 126 P L N A + VAH + + + ++ + L WV + K D Sbjct: 60 PSLRVGRDRNDAFVQ-VAHEQPMLSLSNTYNYDEIAEICKRTDTLLATDDVPWVAEMKYD 118 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVP---QTVSG----PLANSTLQG 179 G +++L+Y +G L +A++RG+G G+D T V I +VP +++G ++G Sbjct: 119 GSSISLIYEEGVLARAVTRGDGTLGDDVTVNVRTIQSVPLRLHSIAGHPDYTRGRIEVRG 178 Query: 180 EIFL--------QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNS----------LGVF 221 E+ L E + + N R AG + TLNS + + Sbjct: 179 EVLLPFKEFERLNGERTAESEAPFANPRNAAAGTL------KTLNSRIVAQRRLLCICYY 232 Query: 222 VWAWPDG---PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVR--NEW--WKAELPF 274 ++A D P +R+K L GF T K++D A +EW + +LP+ Sbjct: 233 LYALDDETRLPDSYYERMKLLEEMGF---DTGVAPFKSSDLSALYHYIDEWDVQRGDLPY 289 Query: 275 VTDGVVVRAAKEPESRHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVA 331 TDG+V++ + R L A+ W A+KYQP AE+ ++ + VG+SG ++ VA Sbjct: 290 ATDGIVLKVDSLTQQR-VLGNTAKSPRWAFAYKYQPENARAELLSVDYQVGRSGIVTPVA 348 Query: 332 SLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPT 391 ++ PV++ V+R + + + D+ D + + G+ IP+I V R + Sbjct: 349 NVEPVLISGTVVRRATLHNEEFIKSLDLHYHDYVYIEKGGEIIPKI-TAVEPSLRRPEAE 407 Query: 392 P------------PENRFNSLTCYFA--SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 P P + + Y+ S C Q + R+ ++ ++ +G Sbjct: 408 PVRLPERCPACGAPLQQIDGSVGYYCVNSYACPPQIMGRIEHYCTRRAADIN-VGPETID 466 Query: 438 ALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT 497 AL H E+I LT L P + L ++ +PF R + +GI Sbjct: 467 ALFDRHLIENIDDLYKLTASDLAQLPNFKEKSINNLLASIEQSKGRPFARLLYGIGIRFV 526 Query: 498 ---RAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 A A +S +L +T Q LP G A QV+ + Sbjct: 527 GEGTAKTLARHFQSIDRLAQATAYELQALPDVGPKIAEQVVYF 569 >UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNLJ_RHOPB Length = 795 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 112/394 (28%), Positives = 179/394 (45%), Gaps = 37/394 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSE 78 S A+A+ E+ RL +I++ ++ Y+++ ++ D YD L R+ + F S Sbjct: 15 LSKAKAKVELKRLSLEIERHNNAYYQDDAPKISDAEYDALRHRVEAIEAKFPELVSSDSP 74 Query: 79 PRDVMMPPLNG--AVMHPVAHTGV-RKMVDKNALSLWMRERSDLWV----------QPKV 125 + V P G V H V + D R R L + +PK+ Sbjct: 75 TQKVGAAPARGFAKVQHAVPMLSLGNAFSDDEVAEFLTRVRRFLKLDAEQIPAIVAEPKI 134 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQ--TVSGPLANSTLQGEIFL 183 DG++++L Y GKL +A +RG+G GED T V I +P V+ P A L+GE+++ Sbjct: 135 DGLSLSLRYEHGKLVRAATRGDGFTGEDVTANVRTIKDIPHALAVAEPPAACELRGEVYM 194 Query: 184 QREGHI----QQQMGG----INARAKVAGLMMRQDDSDTLNS-LGVFVWAW---PDGPQL 231 + + +Q+ G N R AG + ++D + T + L F +AW D P+ Sbjct: 195 LKSDFLALNQRQETAGEPPFANPRNSAAGSLRQKDVAITASRPLKFFAYAWGEFSDLPEA 254 Query: 232 MS-DRLKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAKEP-E 288 L L AGFT+ T D +A R +A LP+ DGVV + + + Sbjct: 255 TQYGMLGWLKRAGFTVNPLITLCKSVDDALAFYRKIGEERATLPYDIDGVVYKVDRLDWQ 314 Query: 289 SRHWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 R G+A W +A K+ + I+ VG++G ++ VA LAPV + VQ Sbjct: 315 ERLGFAGRAPRWAIAHKFAAEQATTILNGIEIQVGRTGALTPVARLAPVTVGGVVVQNAT 374 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV 381 + + + DI GD ++V AG IP+I VV Sbjct: 375 LHNEDYIKSLDIHIGDTVVVQRAGDVIPQIVSVV 408 >UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 Length = 677 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 116/558 (20%), Positives = 243/558 (43%), Gaps = 55/558 (9%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQ------RCFGSEPRDVM 83 ++EI++L + I ++ Y+ + E+ D YD+L L + + S V Sbjct: 6 VKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSPTNRVG 65 Query: 84 MPPLN--GAVMHPVAHTGVRKMVDKNAL-------SLWMRERSDLWVQPKVDGVAVTLVY 134 PL+ ++H + + L ++ E + V+ K+DG++V L Y Sbjct: 66 GKPLDKFNQIVHKTPMLSLSNAFSEQDLRDFDKRVQEYVGENVEYVVEFKIDGLSVGLTY 125 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 +G+ K +RG+G+ GED +Q + + ++P ++ ++GE+++ ++ + Sbjct: 126 NNGEFEKGATRGDGVVGEDISQNLMTVKSIPLKINDK-KELIVRGEVYISKDNFRKVNEQ 184 Query: 195 GI--------NARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQL----MSDRLKELAT 241 N R AG + + D T L +FV+ + + S+ L+ L Sbjct: 185 QEEQEQPLFANPRNLAAGSLRQLDPKLTAKRPLDIFVFNMENIEEYDLESHSESLEYLEK 244 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEWW---KAELPFVTDGVVVRA--AKEPESRHWLPGQ 296 GF+++Q+Y + K+ DEV E+W + L + DG+V++ K+ + + Sbjct: 245 LGFSVSQSY-KVCKSIDEVIE-HIEYWTDNRGNLDYEIDGMVIKVNNIKQRDEMGYTAKS 302 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K+ + ++ I VG++G I+ A L PV L V R + + +E Sbjct: 303 PRWAIAYKFPAEKKKTKIVDIIVEVGRTGTITPSAILEPVRLAGTTVSRATLHNEDYIRE 362 Query: 357 WDIAPGDQILVSLAGQGIPRI----------DDVVWRGAER----TKPTPPENRFNSLTC 402 DI D +LV AG IP++ D++ ++ E+ ++PT ++ C Sbjct: 363 KDIKINDTVLVQKAGDIIPQVLEVIKEERTGDEIDFKMPEKCPVCSEPTIRLEGEAAVKC 422 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNT 462 S C Q ++ ++ + +DG+GE+ L + + + E + + Sbjct: 423 INMS--CPAQIRRGIIHFVSRDAMNIDGLGESIITLLLNEKIIQDVSDLYYIKKEDVVDL 480 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP---LTRAALNASDERSWSQLLFSTEQF 519 + + + L + +++ R + +GI + A + A + + +++ +T + Sbjct: 481 ERMGEKSADNLINSIEKSKENDLWRLINGLGIKFIGVKAAKILAYNFKDLDEVISATSEQ 540 Query: 520 WQQLPGTGSGRARQVIEW 537 ++L GS A V+E+ Sbjct: 541 LEELEEFGSIMANSVVEF 558 >UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7Y7_MYCHP Length = 668 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 125/537 (23%), Positives = 236/537 (43%), Gaps = 56/537 (10%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYD----QLSARLTQWQRCFGSEPR---- 80 + ++EI LQ +I WD+ Y+ EV D +YD +L A ++ F E Sbjct: 9 KIRKEIFDLQAKISAWDNAYYNLDSPEVPDEIYDVEFNKLKALEEKYASFFSDEELKNSP 68 Query: 81 ----DVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWM----RERSDL--WVQPKVDGVAV 130 + + L V H + K + + ++ + SD +++PK+DG+++ Sbjct: 69 TRKINALASDLFKKVKHKRPMLSLNKAYSLDEIQKFIDNIKKITSDFSFFIEPKIDGLSI 128 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG--H 188 +++Y DGKL +AI+RG+G+ GED T V +S +P+T+ + ++GE++L Sbjct: 129 SIIYEDGKLVRAITRGDGITGEDVTANVVQMSCIPKTIEYK-ESLEVRGEVYLAISDFEK 187 Query: 189 IQQQMGG------INARAKVAGLMMRQDDSDTLN--SLGVFVWAWPDGPQ----LMSDRL 236 + ++G N R AG +RQ +S + +L F++ D Q M + Sbjct: 188 LNLKLGQENKNKLANPRNAAAG-TLRQLNSQIIKERNLSAFLYYVVDPLQHNIKTMQEEH 246 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAKEPESRHWLPG 295 + L T GF +T A D +RN + K + + TDGVV++ E + L Sbjct: 247 EFLKTYGFPVTHEVQHANTLQDIEEYIRNFKNQKLLIDYETDGVVIK-LNEVQYFDKLGS 305 Query: 296 QAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 A+ + +A+KY+P + +K I VG++G ++ A L PV + V + + + Sbjct: 306 TAKFPHYAIAFKYEPNVETTTIKRIYATVGRTGLVTYNAELEPVEISGSLVSFATLNNFQ 365 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE-----RTKPTP-PENRF----NSLTC 402 ++ ++ D + + AG+ IP + ++ E + + P N+ L Sbjct: 366 YIKDLNLNENDLVYIKKAGEIIPCVIGLISGKKEIDHFQKVEFCPYCHNKLVDSETGLEQ 425 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEH---IFSWLLLTPEQL 459 + ++D C E +L+ +K L ++ +GE + + IF+ L + L Sbjct: 426 FCSNDQCPEIQRRKLIHFCSKDGLDINTMGERNIDLFLKNSLISNPIDIFN-LKNKKQDL 484 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQLL 513 + + + + + +P + + A+ IPL A AS +S LL Sbjct: 485 LKLNRMGEKSIENILISIDECKNKPLYKMISALSIPLIGVKLAKFVASKIKSLHNLL 541 >UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNLJ_DICNV Length = 678 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 116/519 (22%), Positives = 215/519 (41%), Gaps = 65/519 (12%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE-PRDVMMPPLNGA- 90 E+ L+Q I+ + Y+ + D +D L +L + G P D + G Sbjct: 11 ELEALRQTIRAHEYAYYVLEAPNIADSEFDALMQKLRALEAASGLPIPADSPTQRVGGKA 70 Query: 91 ------VMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVDGVAVTLVYR 135 V H +A + + + + + + R + L +PK DG+A+ L Y Sbjct: 71 DNRFRNVAHHIAMLSLDNVFNADEFADFYRRLQEQLSPTTAISLIAEPKFDGLAINLRYE 130 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQGEIFLQREGH--IQQ 191 +G L +A +RG+G+ GED TQ V IS +P ++ P ++GEI++ ++ + + Sbjct: 131 NGILQRASTRGDGITGEDVTQNVRTISTIPLRLNTHTPPDVIEIRGEIYMPKKAFYALNE 190 Query: 192 QMGG------INARAKVAGLMMRQDDSDTLN-SLGVFVWAW--------PDGPQLMSDRL 236 Q N R +G + + D T L F + + P+ + + ++ Sbjct: 191 QAAANGEKIFANPRNAASGSLRQLDPRITARRQLAFFAYGYGEITNYQLPETYEALLEQY 250 Query: 237 KELATAGFTLTQ---TYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRH-- 291 + +L Q T A+ + A+ R + LPF DGVV + + + + Sbjct: 251 RAWHIPVCSLHQKAATLPEALAAYQQFAKQREQ-----LPFDIDGVVFKVNRFADQQRAG 305 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 +L W +AWK+ + + ++AI+ VG++G ++ VA L PV + V+ ++ + Sbjct: 306 FLARAPRWAIAWKFPALEKTTRIEAIELQVGRTGAVTPVARLQPVTIAGVVVRSASLHNA 365 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP----------------EN 395 R DI GD I + AG IP + VV E+ P P +N Sbjct: 366 REIARKDIRVGDTIFIRRAGDVIPEVVSVVL---EKRLPDAPVFAMPEHCPVCAAAIVQN 422 Query: 396 RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 ++ C Q ++ L+ +++ L + G+GE + L LT Sbjct: 423 EDEAVARCSGGLHCPAQRVAALIHFASREALDIRGLGEKLIQQLVAQEFVRTPADLFCLT 482 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + + P + K + + + A+K R++ A+GI Sbjct: 483 ADDWASLPRMGKKSAHNVMTAIDAAKKTTLARFIYALGI 521 >UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB Length = 680 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 125/522 (23%), Positives = 216/522 (41%), Gaps = 64/522 (12%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDVMMPP 86 E+ L+++I + + Y+ + E+ D YD L RL + + S + V P Sbjct: 10 EVENLRREINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDSPTQRVGAEP 69 Query: 87 LN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW--------VQPKVDGVAVTLVYRD 136 L G V HP + L W + L +PK+DG+AV L YR+ Sbjct: 70 LKAFGIVNHPYPLLSLANAFSDTELEAWYQRVKKLLGNIPFQIDCEPKMDGLAVALTYRN 129 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREG----HIQ 190 GK +RG+G +GE+ T+ + I ++P P A + GE++L + G + + Sbjct: 130 GKFATGATRGDGFQGENITRNLRTIHSIPLNAE-PNAPPVFEVRGEVYLSKNGFAKLNRE 188 Query: 191 QQMGGI----NARAKVAGLMMRQDDSDTLN-SLGVFVWAWP-DGPQLMSDR----LKELA 240 + G+ N R AG + + D S T L +F++A L+ D L + Sbjct: 189 RADKGLPLFANPRNAAAGSLRQLDPSVTAERPLDIFIYALGYSEDSLLPDSHWQILDYFS 248 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPESRHWLPG--- 295 GF + R V +E + +A LP+ DGVV + +H L Sbjct: 249 KIGFRI-NPLNRLVNTLEEAKEYYRQMAANRASLPYEADGVVFK-VDSVSLQHRLGDVGR 306 Query: 296 QAEWLVAWKYQPVAQV-AEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 + W +A+K+ P QV +K I +VG++G ++ A L PV + V++ + + Sbjct: 307 EPRWAIAYKF-PAEQVMTRLKKIGISVGRTGTLNPFAVLEPVNVGGVVVKQAALHNEDDI 365 Query: 355 QEWDIAPGDQILVSLAGQGIPR-IDDVVWRGAERTKP--------TPPENRFNSLTC--- 402 DI GD +++ AG+ IP + V+ + +KP P NR C Sbjct: 366 LRKDIREGDTVIIQRAGEVIPEVVAPVLSKRNPESKPFRMEESLFNPNLNRTACPVCGGE 425 Query: 403 ----------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 Y A+ C QF +L ++ + + GIGE+ L Q +++ Sbjct: 426 IYRPAGEAMHYCANVSCPAQFERQLEHFVSRGAMDIRGIGESLSVILAQQGLVKNVSDLY 485 Query: 453 LLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 LT L P + + + + ++ +P R + +G+ Sbjct: 486 YLTTADLLQLPRMGEKSADNIIDAIADSKTRPLDRVIFGLGV 527 >UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 Length = 673 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 110/523 (21%), Positives = 226/523 (43%), Gaps = 66/523 (12%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-----GSEPRDVM 83 R + +I+ L+Q++ QW+ +Y+ V D VYDQ L + + + + P V Sbjct: 3 RIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQAMRELIELENAYPQFKTNNSPS-VR 61 Query: 84 MPPLNGAVMHPVAHT----GVRKMVDKNALSLWMRERSD-------LWVQPKVDGVAVTL 132 + + V H + D N L + ++ + V+PK+DG+++++ Sbjct: 62 VGGFVSEKFNKVKHKRPMLSLSNAFDANDLRKFDQDNQNASVDLKGYVVEPKIDGLSISI 121 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEI------FLQ 184 +Y++ KL++AI+RG+G+ GED T + I +P + + ++ GE+ F + Sbjct: 122 IYKNAKLHQAITRGDGVNGEDVTSNILTIKDIPHYIDQKYKDYEIEVRGEVYMAFHDFYE 181 Query: 185 REGHIQQQMGGI-NARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQL----MSDRLKE 238 ++++ N R AG + D+S L F++ + +L + ++ Sbjct: 182 MNDNLEESDKKFANPRNAAAGTLRSLDNSIVAERKLSAFMYYLVNAQELGIKTHYESIQF 241 Query: 239 LATAGFTLT------QTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEP--ESR 290 L F ++ T + D +VRN +L ++ DG+V++ + Sbjct: 242 LKDNKFKVSDLIVKVDTIDEVINQIDRYTKVRN-----DLSYMIDGIVIKINNLEVYDEI 296 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 + +W +A+K+ +++ I VG++GKIS VA + P++LD V+ + + Sbjct: 297 GYTSKFPKWAIAYKFPANVVSSQLLEIINDVGRTGKISYVAKIKPILLDGSIVEYATLHN 356 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRID--DVVWRGAERTKPTPPENRFNSLTCYFA--- 405 +E DI D+I + AG IP +D D+ R A P E+ N +C Sbjct: 357 FDFIKEKDIRINDEIKIYKAGDVIPYVDGVDLSKRLAN---SVPYESITNCPSCQSVLVR 413 Query: 406 --SDV---------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 +V C++ I ++V+ ++ + ++G+ +A + + +++ L Sbjct: 414 ENDEVDQRCLNIYGCKKINIEKIVYFVSRNCMNIEGMSDAIINKFYDANLIKNVADLYYL 473 Query: 455 TPEQ---LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + L + I + L + N ++ + + A GI Sbjct: 474 QKHKEFILASDFKIKDKSFSNLINSINNSKTRSLEFLLTAFGI 516 >UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 Length = 669 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 123/518 (23%), Positives = 221/518 (42%), Gaps = 58/518 (11%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPR 80 PA EE+ R+ +++ + Y+ ++D YD + +L + +R + S Sbjct: 7 PAVRIEELRRI---LREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTH 63 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAV 130 V G +V H + + + + + R S+ + + K DG+++ Sbjct: 64 RVGSDKTEGFASVRHDRPMLSLSNTYNYDEIGDFYRRVSEGLQGAPFEIVAELKFDGLSI 123 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFL----- 183 +L+Y DG L +A++RG+G+ G+D T V I +VP + G L+ GEI L Sbjct: 124 SLIYEDGMLVRAVTRGDGIMGDDVTANVRTIRSVPLRLRGDDYPRMLEVRGEILLPFKEF 183 Query: 184 -----QREGHIQQQMGGINARAKVAGLMMRQDDSDTL---NSLGVFVWAWPDGP--QLMS 233 QRE + N R +G ++Q D + N F + + D P + Sbjct: 184 DRINAQREAEGEPLFA--NPRNAASG-TIKQLDPHIVAGRNLDAYFYYLYSDEPLAENHY 240 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARV-RNEWWKAELPFVTDGVVVRAAKEPESRHW 292 DRL + GF ++ T D A + R + + LP TDG+V++ P + Sbjct: 241 DRLMQARQWGFKVSDAVTLCCSKEDVYAFIDRFDTERLTLPVATDGIVLKV-NAPAQQDL 299 Query: 293 LPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 L A+ W +A+KYQ ++ + + VG++G ++ VA+L PV++ V+R ++ Sbjct: 300 LGFTAKSPRWAIAYKYQAERVRTRLQHVSYQVGRTGAVTPVANLDPVLISGTVVRRASLH 359 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRI-------DDVVWRGAERTKPTP----PENRFN 398 + E D+ GD + V G+ IP+I + R T P P R Sbjct: 360 NADFIAEKDLHEGDFVYVEKGGEIIPKIVGVDTDARSIDGRPIVFTVLCPDCATPLVREQ 419 Query: 399 SLTCYFASDV--CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP 456 Y+ + C +Q RL ++ ++ IG L+ + ++ + LT Sbjct: 420 GEAAYYCPNAEGCPQQQKGRLEHYCGRKAADIN-IGPETIELLYSRNMIRNVADFYALTE 478 Query: 457 EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 EQL PG K +A+L ++ +P+ + +GI Sbjct: 479 EQLLTLPGFKKRAAAKLLDSIEASKARPYQAILFGLGI 516 >UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 Length = 663 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 102/407 (25%), Positives = 173/407 (42%), Gaps = 41/407 (10%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEI 181 K+DG+AV + Y +A+SRGNG+KGED T VS I ++P + P + ++GE+ Sbjct: 114 KIDGIAVAIRYEKRLFAQALSRGNGVKGEDITANVSTIRSLPMRLPQEAP-EDLEVRGEV 172 Query: 182 FLQREGH-----IQQQMGGI------NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQ 230 FL E Q++ G + NA L+ ++ + L V+ + Sbjct: 173 FLSYEAFEELNACQREQGKLEFANPRNAAGGTLKLLSSKEAAKRKLDLSVYGLITDQKKR 232 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAKEPE- 288 + L+ + GF + + + V R+R E +A LP DGVV++ Sbjct: 233 SHFENLQLCSQWGFFVAGMPKQCRSRQEVVERIREIEEMRAALPMAIDGVVIKVDNIAHQ 292 Query: 289 ------SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 S+H+ W +A+KY P ++ I VGK+G ++ VA LAPV L + Sbjct: 293 DRLGLTSKHY-----RWAIAYKYAPERAETILEDIVVQVGKTGILTPVAELAPVFLSGSR 347 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKP----------- 390 V R ++ + ++ DI GD + V G+ IP+I + + + + ++P Sbjct: 348 VSRASLYNQDEIEKKDIRIGDSVYVEKGGEVIPKIVGINLAKRSLESEPWKMPSLCPVCH 407 Query: 391 TPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 P S+ C + +C + ++ + +K L +D +GE L + Sbjct: 408 EPVVKEKVSVRCI--NPLCSGGMLEKICFFASKSALNIDHLGEKVVTKLFEVGLISSCSD 465 Query: 451 WLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT 497 LT E L+ PG L A+K R + A+ IP Sbjct: 466 IFALTEEDLKQVPGFKDRSIQNLLASIAGAKKVALDRLLTALSIPFV 512 >UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD Length = 685 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 141/578 (24%), Positives = 246/578 (42%), Gaps = 69/578 (11%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRD 81 A A++ + L++QI+ + Y+ E E+ D YD L L + + F S + Sbjct: 18 AEARQRVEELREQIRYHNRKYYVEDAPEISDAEYDALYRELEELESRFPELVTPDSPTQR 77 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLW-MRERSDLW----------VQPKVDGV 128 V PL V H V ++ L W R R L + K+DG+ Sbjct: 78 VGGEPLEEFEEVRHAVPMLSLQNARRVEELREWDARVRRLLGPEEEGRLRYVTELKIDGL 137 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG-PLANSTLQGEIFLQ--- 184 AV+L Y +G+L + +RGNG GED T+++ I +VP + P +GE++++ Sbjct: 138 AVSLRYENGRLVRGATRGNGFVGEDVTRQLRTIRSVPDRLDDDPPGVLEPRGEVYIKLKD 197 Query: 185 -REGHIQQQMGG----INARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLM---SDR 235 E + ++Q G N R AG + + D T L ++++ +G + S+ Sbjct: 198 FEEFNRRRQERGERPFANPRNLAAGSVRQLDPRVTARRPLTIYLYGVGEGYENFESHSEA 257 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVRA-AKEPESRHW 292 L L G + + D V W K L F DGVVV+ ++E + R Sbjct: 258 LAALRRYGLRVNPHTVHG--DIDSVIEECGRWAKKREALDFQVDGVVVKVDSREQQERLG 315 Query: 293 LPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 +A W +A+K++P+A ++ I VG++G ++ A L PV + + R + + Sbjct: 316 AVQKAPRWAIAYKFEPLAGRTRLRDIVVTVGRTGALTPQAVLEPVNVGGVTISRATLHNE 375 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRI----------DDVVWRGAERT-----KPTPPENR 396 +E I GD ++V AG IP++ D+ +R ER + + PE Sbjct: 376 DYIKEKGILIGDTVIVERAGDVIPQVVRPVPEERDGDEEEFRMPERCPVCGERVSRPE-- 433 Query: 397 FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP 456 A+ C Q + ++ ++ + ++G+GE R L + L Sbjct: 434 -GEAITRCANVRCPAQALEHIIHWASRGAMDIEGLGEKLARKLFDLGLIRDVADLYELRA 492 Query: 457 EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFST 516 EQL G+ + + L ++++PF R + +GI R +A+ E + FS Sbjct: 493 EQLAPLEGLGEKSAQNLIRAIERSKERPFDRVLFGLGI---RHVGSATAELIAER--FSG 547 Query: 517 EQFWQ--------QLPGTGSGRARQVIEWKENAQIKKL 546 E+ + Q+ G G AR V+E+ + +KL Sbjct: 548 EELLRGVGVEELTQIEGVGEIVARAVVEYFSLEENRKL 585 >UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA Length = 771 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 150/579 (25%), Positives = 241/579 (41%), Gaps = 64/579 (11%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPL 87 ARA E L +++ + Y+ V D YD+L LT + E R P Sbjct: 61 ARAAE----LARELDEHAYRYYVLDSPTVSDAEYDRLMRELTALEEHH-PELRTPDSPTQ 115 Query: 88 NGA-----VMHPVAHT----GVRKMVDKNALSLWM----RERS-DLWV-QPKVDGVAVTL 132 A + PV H + + D + LW RE D W+ + K+DG+AV L Sbjct: 116 KVAGSYSTLFTPVEHLERLLSLDNVFDDDEFHLWAARAARETEVDGWLCELKIDGLAVDL 175 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREGHIQ 190 VY +G+L +A +RG+G GED T + +++VP + G L+ GE+F E + Sbjct: 176 VYEEGRLVRAATRGDGRTGEDITPNIRTLASVPTRLRGASVPELLEVRGEVFFPTEKFAE 235 Query: 191 QQ----MGG----INARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQLMSDRLKELAT 241 GG N R AG + ++D T L + V G Q D + A Sbjct: 236 LNASLVAGGGKPFANPRNAAAGSLRQKDPRVTATRPLDMIVHGL--GAQRGFDAASQSAA 293 Query: 242 ----AGFTL-TQTYTRAVKNADEVARVRNEWWKA--ELPFVTDGVVVRA-AKEPESRHWL 293 A F L T+ + + +V + W +A ++ DGVVV+ A + R Sbjct: 294 YARFAEFGLPVSTHFEVLASVGDVLAFIHRWGRARHDVEHEIDGVVVKVDAFALQRRLGS 353 Query: 294 PGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 +A W VA+KY P +++ I+ VG++G+++ L PV++ V + +V Sbjct: 354 TSKAPRWAVAFKYPPEEVTTKLRDIRVNVGRTGRVTPFGELEPVLVAGSTVGLATLHNVD 413 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAERTKPTP------------PENRF 397 + GD +++ AG IP I V G ER P PE Sbjct: 414 EVGRKGVLIGDTVVLRKAGDVIPEIVGPVVDLRDGTERAFVMPTHCPECGTELVRPEGEV 473 Query: 398 NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 + + C +D C Q + L ++ L +DG+G AL + R I LTPE Sbjct: 474 D-IRCP-NTDACPAQLRELIFHLASRNALDIDGLGYETAIALLEADRVGDIGDIFHLTPE 531 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI----PLTRAALNASDERSWSQLL 513 + G + K Q+ AR +P R ++ + I P AL A + RS + Sbjct: 532 SFEGLRGFGQKKIDQILRGVEAARHRPLWRLLVGLSIRHVGPTAARAL-ARELRSLDAIA 590 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 + + + G G A V++W +A+ + + + +AA Sbjct: 591 AAPAEQLAAVEGVGPKIASAVVDWFADARHRDIVARIAA 629 >UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNLJ_HAHCH Length = 683 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 122/526 (23%), Positives = 218/526 (41%), Gaps = 66/526 (12%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPR 80 PA QEE++ L++ I + Y+ + D YD+L RL + + F S + Sbjct: 5 PAAIQEELNTLRETINDHNYRYYTLDDPSIPDAEYDRLMRRLREIEAEFPQTITPDSPTQ 64 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-----------RSDLWVQPKVDG 127 V P G V H + + ++ L + R R D +PK+DG Sbjct: 65 RVGAAPAEGFETVSHRLPMLSLDNAFEEQDLLDFDRRVRERLKEAEDARIDYCCEPKLDG 124 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFL-- 183 +A++L+YRDG L + ++RG+G GED T V + +P + G A ++GEI+L Sbjct: 125 IAISLLYRDGYLVRGVTRGDGSAGEDITANVKTVKNIPLKLRGEGYPAELEVRGEIYLPK 184 Query: 184 ------QREGHIQQQMGGINARAKVAGLMMRQDDSDTLN--------SLGVFVWAWPDGP 229 ++ + + +N R AG + + D T S+G F P G Sbjct: 185 AAFDAINKDAAAKGEKTFVNPRNAAAGSLRQLDPRITAKRALEMCCYSVGYFEGELP-GT 243 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW-WKAELPFVTDGVVVRAAKEP- 287 Q D L +L G + A + + R+ + +LP+ DGVV + + Sbjct: 244 Q--HDILTQLQQWGLKINSQMKLASGAQECLDYYRHIMSVRDQLPYEIDGVVFKVNRIDL 301 Query: 288 -ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 + ++ W +A K+ ++ E+ A+ F VG++G ++ VA L PV + V Sbjct: 302 QQELGFVSRAPRWAIAHKFPAHEEMTELLAVDFQVGRTGAVTPVARLKPVFVGGVTVSNA 361 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-RGAERTKPTP-PENRFNSLTCYF 404 + ++ + D+ GD +++ AG IP++ VV R E P PE + C Sbjct: 362 TLHNMDEIRRLDVHIGDTVIIRRAGDVIPQVVSVVQDRRPENAVPVDRPE---HCPVC-- 416 Query: 405 ASDV----------------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 SDV C Q + +++ + +DG+G+ L + + Sbjct: 417 GSDVLQLEGEAVARCSGGLYCSAQRKEAIKHFASRKAMDIDGLGDRLVELLVEKELIDSP 476 Query: 449 FSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 S L + + + + L + +++ F R++ A+GI Sbjct: 477 ASLYSLKAPDVAGLERMGEKSAQNLINAIEASKQTTFARFIYALGI 522 >UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=DNLJ2_ARTCA Length = 701 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 129/543 (23%), Positives = 239/543 (44%), Gaps = 69/543 (12%) Query: 55 EVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMH--PVAHTGVRKMVDK---NAL 109 E+ D +D+L A++ + G EP + + V H K ++K +A+ Sbjct: 61 EMNDAEFDRLLAKIASHEAANGIEPEHDLHDTIGHGGAGGGDVEHATPMKSLEKPGEDAV 120 Query: 110 SLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS 169 + + ++PK+DG+A+++ Y +GK+ +A RG+G GED T +V + +P+ Sbjct: 121 IEFAAKHPKAVIEPKIDGLAISVRYENGKMVRAARRGDGYTGEDVTDRVRGVDGLPEMAG 180 Query: 170 GPLANSTLQGEIFLQREGH-----IQQQMGGI---NARAKVAGLMMRQDDSDTLNSLGVF 221 + ++GE++L E I+Q G NAR VAG++ +QD S G+F Sbjct: 181 D--GDYEVRGELYLNDENKAKANAIRQAAGKAPFANARNGVAGMLNKQDGS----YAGLF 234 Query: 222 VWA----WPDGPQLMSDRLKELATAGFTLTQTYT-RAVKNADE----VARVRNEWWKAEL 272 +A D D +++L GFT ++ ++V +A++ +A + E + L Sbjct: 235 SFAAYSTTIDEKADHLDSMQQLEGMGFTTARSLLPQSVLDAEDPMAAIAALGAE--RKGL 292 Query: 273 PFVTDGVVVRAAKEPESRHWLPGQ--AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVV 330 F+ DG V++ E G +W VA+KY V + ++ I++ +GK+G++S+ Sbjct: 293 NFLMDGAVLKVNTAAERAELGEGSRAPKWAVAYKYPAVEEPTVIEDIEYNIGKTGRLSIR 352 Query: 331 ASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP 390 A L PV +D V+ ++ +V Q D+ GD + A IP++ + R R + Sbjct: 353 ARLTPVEVDGSVVEYASLHNVGHLQAADMRIGDTVSAYKANDIIPQVH--LPRADLRDES 410 Query: 391 TPP----------ENRFNSLT----CYFASDVCQEQFISRLVWLGAKQVLGLD--GIGEA 434 + P F+ T C+ E +S + A + GLD G+G + Sbjct: 411 SQPWQPPSVCPQCSEPFDKSTELWRCH-----TPECSVSGRISYAASRDAGLDIEGLGGS 465 Query: 435 GWRALHQTHRFEHIFSWLLLTPEQLQ----------NTPGIAKSKSAQLWHQFNLARKQP 484 AL + + + L +QL T + + +A++ + A+ QP Sbjct: 466 IGDALIEKDLVKDVSDLFYLGEDQLAEVELGETSTGGTRTLGQKNAAKIMAEIEKAKSQP 525 Query: 485 FTRWVMAMGIPLTRAALN---ASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIE-WKEN 540 R + A+ + T A++ + L +T + G G +A + E K+N Sbjct: 526 LNRVITALSMRFTGRTFGRRLAAEFGTMEALQAATVSQLANVEGIGQKKAEVIHEQLKKN 585 Query: 541 AQI 543 A + Sbjct: 586 APV 588 >UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJM8_FIBSS Length = 715 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 128/580 (22%), Positives = 240/580 (41%), Gaps = 83/580 (14%) Query: 31 QEEISR-----LQQQIKQWDDDYWKEGKSEVEDGVYD-------QLSARLTQWQRCFGSE 78 Q++I R L++Q+++ Y+K+G S + D +D L A+ + R GS Sbjct: 4 QKDIDRTRYFELKKQLEEASRLYYKDGVSPMSDQDFDFGLKEMEALEAKYPEL-RGKGSL 62 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNAL------------SLWMRERSDLWV-QP 123 + V N V H V + + + + S R S W+ + Sbjct: 63 TQKVGSDLTNDFAKVAHAVPMLSIANVYSEEEMREFVKAAEEGLSSFVSRLSSKKWICER 122 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----------PLA 173 K+DGV+++++Y +G+L +A +RG+G +G+D T I+ +P+ P Sbjct: 123 KIDGVSLSVIYENGRLKQAATRGDGAQGDDVTLNALTIADIPEYFDAKKLKIDPSEIPQG 182 Query: 174 NSTLQGEIFLQREGH--------IQQQMGGINARAKVAG-LMMRQDDSDTLNSLGVFVWA 224 ++GE++++RE ++ + N R V+G L ++ + F + Sbjct: 183 TFEVRGEVYMEREAFERLNEQFILENKKTFQNCRNTVSGSLKLKSVAECKTRPMRFFAYH 242 Query: 225 WP-DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVV 281 P + + LK+L GF +T DE+ + + + LPF DG+VV Sbjct: 243 IPQSNNKTHEENLKQLKRLGFHTNDYWT--ADTVDEIMAISEKIGASRDSLPFDIDGMVV 300 Query: 282 RAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 + + R W +A+K++ + +++F VG++G ++ VA+LAPV L Sbjct: 301 KLNDLQQQRELGSTSKSPRWAIAYKFKAERAYTPLLSVEFQVGRTGAVTPVANLAPVRLA 360 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPEN-- 395 V+R + + D+ GD + V G+ IP+I DV R A + PE Sbjct: 361 GTTVKRATLHNFDEVARLDLHYGDTVGVEKGGEIIPKITDVKRELRPAGASPVVAPEKCP 420 Query: 396 ---------------RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALH 440 R +L C E F+SR + + ++ +G A +L Sbjct: 421 VCGEQLTHIDGEVILRCENLHCKAQVQCLFEHFVSR-------EAMNIENLGPALIASLL 473 Query: 441 QTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL---T 497 T + + I LT E L++ +AK + ++ ++++ + +GI T Sbjct: 474 ATGKIKRIPDLYRLTLEDLESQERMAKKSAKNVFDAIQASKQRSLENLLHGLGIRFVGRT 533 Query: 498 RAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 A A R+ ++ +T + Q + G + V E+ Sbjct: 534 SARNIAKHFRTLEKIRTATVEELQNVTDVGERIGKSVYEF 573 >UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=DNLJ_BUCBP Length = 672 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 107/446 (23%), Positives = 203/446 (45%), Gaps = 47/446 (10%) Query: 115 ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN 174 E+ + K DGVA+ L+Y +G L +A++RGNG +GED T V++IS+VP+ + G Sbjct: 106 EKIFFCSELKFDGVAINLIYINGLLFRAVTRGNGYEGEDVTSNVNMISSVPKKLIGIDIP 165 Query: 175 STLQ--GEIFLQ---------REGHIQQQMGGINARAKVAGLMMRQDDSDT-LNSLGVFV 222 TL+ GEIF+ R ++++ N+R +G + ++ T L SL + Sbjct: 166 ETLEVRGEIFMLKSDFKKLNVRLTKFKKKLFS-NSRNAASGSLRHKNAKVTELRSLTFYC 224 Query: 223 W-----AWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVAR----VRNEWWKAELP 273 + ++ + RLK+L + GF ++ Y + DE+ R ++NE + L Sbjct: 225 YGCGYCSYENFTDSHFLRLKKLKSWGFPISD-YNFLHSSYDEILRFYNFIQNERY--FLN 281 Query: 274 FVTDGVVVR--AAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVA 331 F DG+V++ + +S W VA+K+ ++ + I + VG++G I+ VA Sbjct: 282 FNIDGIVIKVDSICLQKSLSTTSKAPRWAVAYKFSDKIKITTIMNILYQVGRTGVITPVA 341 Query: 332 SLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV-----VWRGAE 386 + P+ + +++V++ + + ++ GD + + +G IP I +V + R + Sbjct: 342 QVTPIYISGVLIKKVSLHNFNEIRRLNLNIGDSVFIKRSGDVIPHIIEVASKCKLQRNED 401 Query: 387 RTKPT-PPE-------NRFNSLT--CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 + P PE + F+++ C A C QF L + +K+ L + G+G Sbjct: 402 ISIPKFCPECGSKLKVDSFSNIKIRC-MAGLKCLSQFKKLLHYFCSKKGLNILGLGPKII 460 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 L + L L I KS + N ++ F++++ ++GI Sbjct: 461 DKLVDLGYVSDLSDIFDLNVSLLTKVENIGIIKSQNIIRSINNSKNVSFSKFLCSLGI-- 518 Query: 497 TRAALNASDERSWSQLLFSTEQFWQQ 522 + + RS S F+ ++F Sbjct: 519 --FEVGSIVARSISNYFFTLDKFMNS 542 >UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum V4 RepID=DNLJ_METI4 Length = 689 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 132/564 (23%), Positives = 235/564 (41%), Gaps = 65/564 (11%) Query: 32 EEISR----LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRD 81 EEI + L + I+++D Y+ E V D YD L L ++ S + Sbjct: 28 EEIKKRHDELVKLIRKYDYAYYVEAHPLVSDQEYDNLYHELETLEKLHPELITPDSPTQR 87 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR--------ERSDLWVQPKVDGVAVT 131 + PL+G V H + + K L ++ ++ V+PK+DGV+++ Sbjct: 88 IGETPLSGFSQVTHEIPMLSLENTYSKEELFAFLERIKRALPGKKISFTVEPKIDGVSIS 147 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFL-----Q 184 VY++G + +RGNG G+D TQ + I ++P + P L+ GE ++ + Sbjct: 148 AVYKNGLFSLGATRGNGTVGDDITQNLKTIRSLPLRLETPDPPEYLEVRGEAYMSPKDFE 207 Query: 185 REGHIQQQMGGI---NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQL-MSDRLKE-- 238 R +++ G + N R AG ++Q D + + V + G + M + +E Sbjct: 208 RLNAQREKEGKVLFANPRNATAG-SLKQLDPRVVAERPLAVVFYGAGKLVGMKCKTQEEW 266 Query: 239 ---LATAGFTLTQTYTRAVKNADEVARV--RNEWWKAELPFVTDGVVVRAAK-EPESRHW 292 L G + + N +EV + + +LP+ TDG V+ + E S Sbjct: 267 LNFLKKIGLPIPIVFW-VCSNENEVYEAIGKLNECRNQLPYPTDGAAVKVNEWEYYSLLG 325 Query: 293 LPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 +A W A+KY + + F VG+SG I+ VA + PV L V R + + Sbjct: 326 YTAKAPRWAFAYKYGAERAKTRLNNVIFQVGRSGTITPVAEMDPVFLSGTTVSRATLHNF 385 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAERTKPTPPENRFNS--------- 399 + + D+ GD + + AG+ IP + V RG E+ + PPE + Sbjct: 386 DQVKRLDVKIGDVVYLEKAGEVIPEVVGVDLNQRRGTEK-EIVPPEFCPSCGEKLSWEGI 444 Query: 400 -LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 L C ++ C Q R++ + + + G+GE+ L + + L E Sbjct: 445 FLRC--ENENCPAQLKERILHFAQRNAMDIQGLGESLVDQLVDKGIVKDVADIYDLDEET 502 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDER-----SWSQLL 513 L N + K + L ++K+ +R + +GIP AS++ + +L Sbjct: 503 LVNLDRMGKKSAQNLLKAIEESKKKDLSRLIFGLGIP--HIGQKASEDLARYFGTMDKLS 560 Query: 514 FSTEQFWQQLPGTGSGRARQVIEW 537 +TE+ LP G AR ++ + Sbjct: 561 HATEEELLNLPFIGEIMARSIVNY 584 >UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV Length = 686 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 145/560 (25%), Positives = 241/560 (43%), Gaps = 87/560 (15%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLS-------ARLTQWQ------RCFGSEPRDVM 83 L+ ++ + + Y+++ E+ D YD L+ AR +W + G P Sbjct: 16 LRAEVARHNRAYYEQDAPEISDDEYDALARALRDMEARHPEWVEDDSPVQTIGGAP---- 71 Query: 84 MPPLNGAVMHPVAH----TGVRKMVDKNAL---------SLWMRERSDLWV---QPKVDG 127 A PVAH T + + D + L SL + SD + + K+DG Sbjct: 72 -----SAAFEPVAHLTPMTSLDNVFDADELREWQEKLARSLNLPPESDDFTFTGEIKIDG 126 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 ++V L Y DG L A +RGNG GE T +V I +PQ + G ++GE++L R Sbjct: 127 LSVNLYYLDGTLQWAATRGNGRVGEMVTAQVLTIPGIPQHLDGLKGQLEVRGEVYLSRAD 186 Query: 188 ----HIQQQMGGI----NARAKVAGLMMRQDDSD---TLNSLGVFV-WAWPDG--PQLMS 233 + Q + G N R AG +RQ D + T N +F DG + S Sbjct: 187 FAAFNAQAEELGTPLLKNPRNGAAG-ALRQKDPEVTRTRNLKAIFYSLGRRDGVEARTQS 245 Query: 234 DRLKELATAGFTL---TQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEP--- 287 + L+ LA GF + ++T+ V AD R+ ++ F DG V++ +P Sbjct: 246 EVLQWLAGRGFPVSHYSETFRGYVAAADYHRRMTE--ARSNFEFDADGTVIKL--DPLAL 301 Query: 288 -ESRHWLPGQAEWLVAWKYQPVAQVAEV-KAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 E + W +A+K+ PV QV V ++I VG++GK++ +A LAP +++ V + Sbjct: 302 QEEAGFTSRAPRWAIAFKF-PVEQVETVLESITVNVGRTGKLAPLAHLAPRLIEGSTVSK 360 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-RGAERTKP-------------- 390 + + ++ D+ GD ++V +G IP+I VV + E+T P Sbjct: 361 ATLHNEDYIRQMDLRVGDTVVVRKSGGVIPQIMRVVTEKRPEKTTPFVFPTYCPECGHEV 420 Query: 391 TPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 T E N+ Y + C Q R+ + ++ + + GIGE + +T Sbjct: 421 TRAEGDANT---YCPNPACPAQRFERIRYFVSRGAMDVRGIGEKLVIQVIETGLVRDAAD 477 Query: 451 WLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDER 507 LLT EQL + K+ + Q ++ +P R + A+G+ A A Sbjct: 478 LYLLTAEQLAGLERGGEKKAQNVLAQLEASKTRPLWRLINALGMTHVGERNAQALARAFG 537 Query: 508 SWSQLLFSTEQFWQQLPGTG 527 S LL +T + + +PG G Sbjct: 538 SLDALLRATPEQIEAVPGMG 557 >UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2H2_9SPHI Length = 791 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 101/360 (28%), Positives = 165/360 (45%), Gaps = 46/360 (12%) Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL 177 + + + K DGVA++LVY +GKL +A++RG+G +G+D T V I +P V G Sbjct: 85 EYFCEMKFDGVAISLVYENGKLVRAVTRGDGTRGDDVTANVRTIRNIPLYVKGDKIPERF 144 Query: 178 Q--GEIFL----------QREGHIQQQMGGINARAKVAGLMMRQDDSDT----LNSLGVF 221 + GEIFL +R + + M N R +G + QD S LN Sbjct: 145 EVRGEIFLPHREFEKINAERNENGEALMA--NPRNAASGTLKMQDSSVVAKRRLNCYFYQ 202 Query: 222 VWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGV 279 + G + + + + GF ++ TY R ++V +W + LP TDGV Sbjct: 203 LLGEDIGVNAHDEAISLIESWGFNVSPTY-RKTNTIEDVLTYIEDWREKRFTLPLDTDGV 261 Query: 280 VVRAAKEPESRHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPV 336 V++ + E R L A+ W +A+KY+ + E+ ++ + VG++G I+ VA+LAPV Sbjct: 262 VLKI-NDYEQREELGFTAKNPRWAIAYKYKAESSETELLSVTYQVGRTGAITPVANLAPV 320 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP------ 390 L V+R ++ + + + GD + V G+ IP+I V E+ KP Sbjct: 321 SLAGTTVKRASLHNANEIERLGLHTGDVVFVEKGGEIIPKITGV---SLEQRKPDSKPIE 377 Query: 391 ---------TPPENRFNSLT--CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRAL 439 TP E + C AS+ C Q + R+ K+ + +D +G RAL Sbjct: 378 YISECPECGTPLERKEGEAKHFCPNASN-CPPQVLGRIEHFVHKRAMDIDSLGTERIRAL 436 >UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE Length = 647 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 119/503 (23%), Positives = 215/503 (42%), Gaps = 62/503 (12%) Query: 41 IKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDV-MMPP---LNGAVM---- 92 + W Y+ + D YD+L ++ +++R + P D+ M P + G V Sbjct: 13 LNAWAKAYYTDDAPIATDEEYDELYHKVLEFER---ANPGDISMFSPTKRVGGEVSDGFV 69 Query: 93 ---HPVAHTGVRKMVDKNALSLWMR----ERSDLWVQPKVDGVAVTLVYRDGKLNKAISR 145 H V + + L W++ E + +QPK DG ++ L+Y +G L +AI+R Sbjct: 70 KARHSVRMWSMEDIFSFEELLAWLKRGDKEGLEFALQPKFDGASLNLLYENGALVRAITR 129 Query: 146 GNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQRE-----GHIQQQMGG---IN 197 G+G+ GED T +I +P ++ ++GE+ + + + Q G N Sbjct: 130 GDGITGEDVTSNAKVIKNIPLQIAYN-GRIEIRGEVVIAKNDFDEINFARAQRGEPQLSN 188 Query: 198 ARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLM-----SDRLKELATAGFTLTQTYTR 252 R AG +RQ DS S + W G Q + S + + + GF + + + Sbjct: 189 PRNAAAG-SLRQLDSAVTASRRLRFKPWGYGEQNLGLETYSQMMDFIYSQGFE-REEFFK 246 Query: 253 AVKNADEVARVRNEW--WKAELPFVTDGVVVR-----AAKEPESRHWLPGQAEWLVAWKY 305 + A+++ + + PF+ DG+VVR A++E P +++VA+K+ Sbjct: 247 ICRTAEQIEEAYKQLVAQRDSKPFMMDGLVVRVQSIAASEELGYTEKFP---KFMVAYKF 303 Query: 306 QPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQI 365 + + + + F VG+SG ++ V L PV +D V+ + + + + GD I Sbjct: 304 PAIEKTTRLLDVAFQVGRSGVVTPVGVLEPVNIDGATVKSATLHNFDEIERLGVQKGDFI 363 Query: 366 LVSLAGQGIPRIDDVVWR---GA----ERTKPTP-------PENRFNSLTCYFASDVCQE 411 + +G IP+I V + G+ ER + P E F + C C+ Sbjct: 364 SIIRSGDVIPKITGVFKQRRDGSQMPIERPRECPVCGSMLLDEGVF--VKCQNLE--CKA 419 Query: 412 QFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSA 471 + I+ L+ +K+ L +DG+GEA L + I LT + L + G K A Sbjct: 420 RVINSLIHFASKKCLNIDGLGEAIVNQLFEAGLVAKIADIYELTAQDLASLEGFKDKKIA 479 Query: 472 QLWHQFNLARKQPFTRWVMAMGI 494 L +R ++ ++GI Sbjct: 480 NLLGAIEASRTPALHSFIASLGI 502 >UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_STRGG Length = 719 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 139/565 (24%), Positives = 241/565 (42%), Gaps = 64/565 (11%) Query: 52 GKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNAL-S 110 G+S ++D YD+L+ + ++ P +V+ G V A V V +L + Sbjct: 42 GESALDDDAYDRLARGIAAYE---ADHPEEVLADSPTGKVAGGAAVGDVPHTVPMLSLDN 98 Query: 111 LWMRERSDLW----------------VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDW 154 ++ E+ W V+PK+DG+AV YRDG+ + I+RG+G GED Sbjct: 99 VFSAEQFVTWTASLERRIGRPVTAWSVEPKLDGLAVAARYRDGRFERLITRGDGTAGEDV 158 Query: 155 TQKVSLISAVPQTVSGPLANSTLQGEIFLQRE-----GHIQQQMGGI---NARAKVAGLM 206 + + +P+ ++ P+ ++GEI + E I+ + GG N R AG + Sbjct: 159 SHAAGAVVGLPERLAEPV-TIEVRGEILMTNEQFAQGNAIRTEHGGAPFANPRNGAAGTL 217 Query: 207 MRQDDSDTLNSLGVFVWA---WPDGPQLMSDRLKELA-------TAGFTLTQTYTRAV-- 254 +D + + + F + PD +L + L EL AG + AV Sbjct: 218 RAKDRAYRVETT-FFAYGALPLPDSGEL-GEALAELPHSEVLAYVAGLGVHTAAGTAVAP 275 Query: 255 ---KNADEV-ARVRN-EWWKAELPFVTDGVVVRAAKEPESRHWLPGQ--AEWLVAWKYQP 307 +EV ARV +A LPF DG+V++A + + G W VA+K Sbjct: 276 LRATTVEEVQARVDGIGALRAALPFGIDGIVIKADLAADQQEAGSGTRAPRWAVAYKLPA 335 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 V ++ + A+++ VG++G I+ A L PV +D V + + D+ GDQ++V Sbjct: 336 VEKITRLLAVEWNVGRTGIIAPRAVLEPVEIDGSTVGYATLHNPADITRRDLRLGDQVMV 395 Query: 368 SLAGQGIPRIDDVV--WRGAERTKPTPPENRFNSLTCYFASD---VCQEQFISRLV---- 418 AG IPRI+ V R + T PE+ + AS+ C RLV Sbjct: 396 YKAGDIIPRIEAPVVHLRTGDETPIAFPESCPQCGSEIDASEQRWRCTRGRDCRLVASVS 455 Query: 419 WLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFN 478 + + L ++G+G L L EQL + ++ + L Sbjct: 456 YAAGRDQLDIEGLGSTRVVQLVDAGLVADFADLFTLRREQLLALDRMGETSTDNLLAAIE 515 Query: 479 LARKQPFTRWVMAMGIPLTRAALNASDERSWS---QLLFSTEQFWQQLPGTGSGRARQVI 535 AR +P +R A+G+ T +++ R ++ +++ + + Q++ G G +A V+ Sbjct: 516 TARTRPLSRVFCALGVRGTGRSMSRRIARHFATMDRIVAADAESLQRVDGIGKEKAAAVV 575 Query: 536 EWKENAQIKKLGSWLAAQQITGFEP 560 E ++ L L A ++ EP Sbjct: 576 --AELVELAPLIGKLVAAGVSMTEP 598 >UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5Z4_FLAB3 Length = 667 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 130/588 (22%), Positives = 242/588 (41%), Gaps = 79/588 (13%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP 86 P Q++I L+++I Q + Y+ + + D +D L + F E D P Sbjct: 2 PENIQQKIDALRKEIHQHNYSYYSLDEPTISDFEFDLKLKELQDLELQF-PEFYDNNSPT 60 Query: 87 LN---------GAVMHPVAHTGVRKMVDKNALSLW-------MRERSDLWVQPKVDGVAV 130 L V H + D N L W + E + + K DG ++ Sbjct: 61 LRVGGQITKNFPTVQHQFRMFSLDNSYDFNDLEEWEKRIRKTLNEPVEFVAELKYDGASI 120 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS-TLQGEIFLQREGHI 189 +++Y +GKLN+A++RG+G +G++ T V IS +P + G ++GEI+L Sbjct: 121 SILYENGKLNEAVTRGDGFQGDEITSNVKTISQIPMQLHGDFPERFFMRGEIYL-----T 175 Query: 190 QQQMGGINARAKVAGL------------MMRQDDSDTLNSLGVFVWAWPDGPQLMSDR-- 235 Q IN R + GL ++ DS + G+ + Q +S+ Sbjct: 176 HQNFEKINKRREEEGLDPFMNPRNTASGSLKMQDSGEVRKRGLSAVLY----QFISENTA 231 Query: 236 -------LKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE 286 L++ + GF ++ + + DEV N W + L F DG+VV+ Sbjct: 232 AQTHWELLQKAKSWGFRISDQ-AKLCADLDEVKAFINFWDENRHTLAFDIDGIVVKVNDL 290 Query: 287 PESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 + R + W +A+KY+ E++ + + VG++G I+ VA+L PV+L V+ Sbjct: 291 AQQRVLGYTAKSPRWAMAYKYKAEKAETELQTVTYQVGRTGAITPVANLKPVLLAGTVVK 350 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRF--NSLTC 402 R ++ + ++ + D + V G+ IP+I V + P E ++ N C Sbjct: 351 RASLHNEDIIRKLGLYEHDFVYVEKGGEIIPKI---VGVNLAKRNPANAEIQYIKNCPEC 407 Query: 403 ------------YFASDV--CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 +F + C Q I R++ +++ L ++ +G L++ E+ Sbjct: 408 STALIRVEDQAIHFCPNELHCPPQVIGRMIHYVSRKALNIENLGSETIEQLYREKLVENP 467 Query: 449 FSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL---TRAALNASD 505 + LT EQL +A+ + + +++ F + + +GI T A + Sbjct: 468 ADFYALTKEQLLPLERMAEKSAQNIITGIEKSKEIAFEKVLFGIGIKHVGETVAKKLVKN 527 Query: 506 ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ----IKKLGSW 549 S L +T Q+ G A + E+ +N + I++L S+ Sbjct: 528 FNSIDDLKNATAAELVQVEDIGLKIAESITEFFKNPENVLMIERLKSY 575 >UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriaceae RepID=C7NA81_LEPBD Length = 706 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 117/536 (21%), Positives = 240/536 (44%), Gaps = 78/536 (14%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------------ 75 ++ QE+ +L+ +I+ ++ Y+ E + D YD L L Q ++ + Sbjct: 24 SKIQEKYKKLRNEIEYHNNLYYNEDNPIISDMEYDALMRELKQLEQEYPELLENSENSPT 83 Query: 76 ------GSEP------RDVMMPPLNGAVMHPVAHTG--VRKMV----DKNALSLWMRERS 117 SE R M+ N + + V+K++ D+N + E Sbjct: 84 KKIGGTASEKFSKVRHRTPMLSLSNTYNISEIEDFDKRVKKIILSQIDENKNN---DENL 140 Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL 177 + ++ K+DG++++L+Y +G+L +A++RG+G GED T+ + IS++P+ + P++ + Sbjct: 141 EYILELKLDGLSISLIYENGELVQAVTRGDGQIGEDVTENIREISSIPKKLKDPVS-LEV 199 Query: 178 QGEIFL----------QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGV------F 221 +GEI L +RE + N R +G +RQ D + G+ Sbjct: 200 RGEIILPISNFNRINQEREDDGEDVFA--NPRNAASG-TIRQLDKTIVADRGLDCYLYYL 256 Query: 222 VWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGV 279 V A G + ++ + GF T + + + E+ + ++W + L + TDG+ Sbjct: 257 VNAENYGINTHLESIEYIKNLGFQTTGVFEKYT-DFTELEKSIDKWHDKRKTLDYETDGL 315 Query: 280 VVRAAKEP--ESRHWLPGQAEWLVAWKYQPVAQV-AEVKAIQFAVGKSGKISVVASLAPV 336 V++ E+ + W +A+K+ P QV ++ + F VG++G I+ VA L V Sbjct: 316 VIKVNNFALYETLGYTTKSPRWAIAYKF-PAEQVKTKLTDVTFQVGRTGVITPVAELEAV 374 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-----RGAERTKPT 391 L V+R ++ + + DI GD ++V A + IP++ +VV+ + E +PT Sbjct: 375 NLSGSVVKRASLHNFDEIRRKDIKIGDNVIVEKAAEIIPQVVNVVFDDRTGKEIEIQEPT 434 Query: 392 ---------PPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 E +L C+ + +C E+ ++ + ++ + + G+G+ + Sbjct: 435 NCPVCNSELSHEEGLVALKCH--NPLCPEKVKRQIAYFVSRDAMNISGLGDKIVEKFIEL 492 Query: 443 HRFEHIFSWLLLTP--EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 + + I L E+L+N + + L + ++ + F++ + A+GIP Sbjct: 493 GKIKTIVDIYSLEKYREELENLEKMGQKSVDNLINSIESSKTRDFSKVLYALGIPF 548 >UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB Length = 684 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 124/534 (23%), Positives = 226/534 (42%), Gaps = 81/534 (15%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQW--------------QRCF 75 A EI RL+++I + + Y+ + E+ D YD + +L QR Sbjct: 6 AVAEIIRLREEIDRHNYRYYVLARPEISDFQYDAMLEKLVALEGEFPELKTSDSPSQRVG 65 Query: 76 GS--------EPRDVMMPPLNGAVMHPVA---HTGVRKMVDKNALSLWMRERSDLWVQPK 124 G E R+ M+ N + V H V+ + +++ R+ + + K Sbjct: 66 GGITKEFPTVEHREPMLSLSNTYSIEEVGEFYHRVVKLLPEEH------RDSPEFVAELK 119 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS--------- 175 DGVAV+L+YRDG L + +RG+G +G+D T + I +VP + P + Sbjct: 120 FDGVAVSLLYRDGLLVRGATRGDGSQGDDITGNIRTIRSVPLRLGNPSGSGEGVERYEGR 179 Query: 176 --TLQGEIFLQR-------EGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAW- 225 ++GE+F+ + EG +++ N R AG + QD + VFV + Sbjct: 180 EIEVRGEVFMTKTDFAVLNEGRPEEERFA-NPRNATAGTLKLQDSGEVSRRKMVFVAYYL 238 Query: 226 -PDGPQLMS--DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE---LPFVTDGV 279 +++S +RL+ L GF T R + ++ + W K LP+ DG+ Sbjct: 239 KESSAEIISHAERLELLERLGF-YTGGEHRVCRTLKDIREYIDGWQKKRLTGLPYEIDGI 297 Query: 280 VVRAAKEPESRHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPV 336 V++ R L ++ W +A+K+ +++I F VG+ G I+ VA L PV Sbjct: 298 VLK-LNNTALRDELGATSKSPRWAIAYKFPAERARTVIRSIVFQVGRLGTITPVAELEPV 356 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP------ 390 L V R + ++ + D+ D +++ +G+ IP++ VV E+ +P Sbjct: 357 RLAGTTVSRSTLHNLEEVERLDVRLHDTVVIEKSGEIIPKVISVV---EEKRRPGTLPVV 413 Query: 391 ---------TPPENRFNSLTCYFA-SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALH 440 TP N + Y S+ C Q +R+ ++ + ++G+G+A L Sbjct: 414 VPESCPSCGTPLVKPPNEVHYYCPNSEGCPAQTKARIEHFASRNAMDINGLGKAIVEQLV 473 Query: 441 QTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + LTP+ + A+ + L + +R + + R + A+GI Sbjct: 474 SSGMVVDAGDLYRLTPDLIMRLDRQAEKSAGNLVNAIAKSRNREYFRVLFALGI 527 >UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4V767_9ACTO Length = 696 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 137/549 (24%), Positives = 226/549 (41%), Gaps = 75/549 (13%) Query: 5 MAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQL 64 M L S+ PA R++ E + +++++ Y+ +G S ++D YD+L Sbjct: 1 MTTLTAAQALSSTSGTSGPAALTGRSEYEAA--LRRLREASQAYYGDGDSVMDDASYDRL 58 Query: 65 SARLTQWQRCFGSE--PRDVMMPPLNGAV-MHPVAHT----GVRKMVDKNALSLWMR--E 115 L W+ +E P +GA VAHT + + D L W E Sbjct: 59 RLALLAWETEHPAEVAPGSPTTLVADGAAPAGDVAHTTRLLSLDNVFDAEGLVAWGASVE 118 Query: 116 R-------SDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV 168 R V+PK+DG AV YR G+L + ++RG+G +GED + + I +P+ + Sbjct: 119 RRLGRAPAGGFTVEPKIDGAAVAARYRGGRLVRIVTRGDGSQGEDISHVIGQIDGLPELL 178 Query: 169 SGPLANSTLQGEIFLQRE-----GHIQQQMGG---INARAKVAGLMMRQDDSDTLNSLGV 220 +G A ++GE+ +E ++ G N R AG + +D L + Sbjct: 179 AGE-ATVEVRGEVAFTQEQFEVANAVRVAHGAPVFANPRNGTAGTLRAKDRPYRLR---M 234 Query: 221 FVWAW-----------PDGPQ---------LMSDRLKELATAGFTLTQTYTRAVKNADEV 260 WA+ P G R A AG + A + D + Sbjct: 235 TFWAYGAVELEGVPFLPAGATQAEALAAVAAAGVRTTAAAGAGLHIVDDLAGAQQAVDAM 294 Query: 261 ARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQ--AEWLVAWKYQPVAQVAEVKAIQ 318 A +R AELP DGVV++ E G W +A K V + ++ + Sbjct: 295 AAMR-----AELPVGIDGVVIKLNDTAEQEAIGSGTRFPYWAIAVKLPAVERQTVLEDVV 349 Query: 319 FAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRID 378 + VG++G ++ A LAPV +D V R + + + D+ GD + V AG IPR+ Sbjct: 350 WEVGRTGVLAPTAVLAPVEIDGSTVTRATLHNPADIRRRDLHIGDTVTVYKAGDIIPRVQ 409 Query: 379 DVV--WRGAERTKPTP-PENRFNSLTCYFASDVCQEQ----------FISRLVWLGAKQV 425 V R A KP P PE C + QE+ + + + +++ Sbjct: 410 AAVALLRPAG-AKPVPLPE---TCPRCGGEINTAQERWRCAKGTSCALPALIEYAAGREM 465 Query: 426 LGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPF 485 L +DG+G+ AL + + LT EQL G ++ ++A+L Q A+ +P Sbjct: 466 LDIDGLGKTYVAALVDSGDVTDVADLFTLTLEQLTAASGSSR-RAAKLAEQIEAAKARPL 524 Query: 486 TRWVMAMGI 494 +R A+G+ Sbjct: 525 SRVFCALGV 533 >UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQN2_9BACT Length = 718 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 123/554 (22%), Positives = 238/554 (42%), Gaps = 65/554 (11%) Query: 1 MKVWMAILIGILCWQSSVWAVCPAWSPARAQEE------ISRLQQQIKQWDDDYWKEGKS 54 ++VW+ + + I C S ++ EE + L+ +I + DD Y+++ Sbjct: 17 VRVWLLVSMCI-CLAGSFGVYSTFGDTSKLSEEERGRGRLVELRAEIARHDDLYYRKAAP 75 Query: 55 EVEDGVYDQLSARLTQWQRCFGSEPRDVMM--------PPLNGAVMHPVAHTGVRKMVDK 106 E+ D YD L L + + + +++ + G H + K + Sbjct: 76 EISDADYDALKRELHRLEELYPDLQDGLLIVDEIGDDRSGVRGEFRHFAPMLSLEKAYTE 135 Query: 107 NAL-SLWMR-------ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKV 158 AL S + R E D V+PKVDG+A++++Y G+ +A+SRGNG GED ++ V Sbjct: 136 EALLSFYDRVLSQLTFEELDCLVEPKVDGMAISVLYERGEFVRAVSRGNGRVGEDVSENV 195 Query: 159 SLISAVPQTV--SGPLANSTLQGEIFLQREGHIQQQMGGINA--------RAKVAGLMMR 208 I +P+ + P L+GE+++ EG + + A R+ AG ++ Sbjct: 196 LRIEGLPRRLETESPPERVELRGEVYVSFEGFRRLNEARVAAGEEPFAHPRSLAAG-SLK 254 Query: 209 QDDSDTLN--SLGVFVWAW------PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEV 260 DD + ++ SL + + + + P+ S + G + + + + Sbjct: 255 LDDPEVVSERSLSIVFFGYGAFEPVEEAPETQSGFYGLAQSWGIPVLEELRKTRGTEALL 314 Query: 261 ARVRN-EWWKAELPFVTDGVVVRAAKEPESRHWLPGQA--EWLVAWKYQPVAQVAEVKAI 317 A VR E + PF DG VV+ + R G + W +A+K+ + I Sbjct: 315 AAVREMEERRVLYPFPMDGAVVKIDRADVQRELGLGTSAPRWAMAYKFAEKRVETRLLGI 374 Query: 318 QFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 + VG++G ++ VA L + L ++R ++ + + D+ GD + + AG+ IP Sbjct: 375 RIQVGRTGLLTPVAELEEIRLGGSSIRRASLHNGGVIERMDLRIGDVVYLERAGEVIP-- 432 Query: 378 DDVVWRGAERTKPTPPENRFNSL--TCYFASDV-------------CQEQFISRLVWLGA 422 +VV + K + + F L +C +A+++ C Q ++ + Sbjct: 433 -NVVGVNLAKRKSSSTKYVFPDLCPSCGYAAELDEGRVERYCRSSTCPAQAQRKIEHFAS 491 Query: 423 KQVLGLDGIGEAGWRALHQTHRFEHIFS-WLLLTPEQLQNTPGIAKSKSAQLWHQFNLAR 481 + +G++GIG A L E + +LL P+ +Q G +++ + +L + + +R Sbjct: 492 SRAVGIEGIGPAKIADLMDAGLVETVADLYLLEVPDLVQAGVG-SEAVARKLVSEISGSR 550 Query: 482 KQPFTRWVMAMGIP 495 R + +GIP Sbjct: 551 AASLWRVLFGLGIP 564 >UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO Length = 678 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 100/413 (24%), Positives = 188/413 (45%), Gaps = 39/413 (9%) Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQ--TVSGPLANS 175 +L +PK+DG+A+++ Y++GK + A++RG+G++GE ++ V I VP S P Sbjct: 118 ELECEPKMDGLAISIFYKNGKFDYAVTRGDGIQGEKVSENVKTIRNVPLKLNTSNPPEEL 177 Query: 176 TLQGEIFLQREGHI--------QQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPD 227 ++GEI L ++ + + N R AG +R DS + + ++++ Sbjct: 178 EVRGEIILDKQSFLSLNEYMQTHENKTFANPRNAAAG-SIRMLDSKVVAKRPLKLYSYGI 236 Query: 228 G--------PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTD 277 G P+ + ++ L + GFT++ A KN EV ++ +A+L + D Sbjct: 237 GYFSKDFVYPETQFELMQLLQSFGFTISDNMFLA-KNFSEVEEYHHKMSHQRADLAYDID 295 Query: 278 GVV--VRAAKEPESRHWLPGQAEWLVAWKYQPVAQV-AEVKAIQFAVGKSGKISVVASLA 334 G+V V K ++ + +W +A+K+ P +V +EV ++F VG++G I+ VA L Sbjct: 296 GLVFKVNNIKLQDTIGYTARGPKWAIAYKF-PAEEVESEVLNVEFQVGRTGAITPVARLK 354 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTP 392 PV + V + ++ + DI GD+++V AG IP + + +R ++ Sbjct: 355 PVAVGGVIVSNATLHNINEIKSKDIRVGDRVIVRRAGDVIPEVVKSLPQYRKSDAQIVEM 414 Query: 393 PEN---------RFNSLTCYFASD--VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 P N N Y + CQ Q RL +++ + +D +G L Sbjct: 415 PTNCPVCDSKIENVNDQAIYRCTGGWHCQAQTTERLKHFVSRKAMDIDKLGAKLIEQLVA 474 Query: 442 THRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + ++ L EQL +A S + +++ R++ A+GI Sbjct: 475 ANLIKYPADIYKLNFEQLTGLERMAAKSSQNVLDSITKSKEPSLARFIFAIGI 527 >UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0P0_9DELT Length = 680 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 145/599 (24%), Positives = 256/599 (42%), Gaps = 77/599 (12%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GS 77 A + +A++ ++ L++QI+ + Y+ E+ D YD L L + + + S Sbjct: 8 AAAKEQARQRVAELREQIRYHNHRYYVLDDPEIPDAEYDALFRELQELEERYPGLAGADS 67 Query: 78 EPRDVMMPPLNGAVMHPVAH----TGVRKMVDKNALS---------LWMRERSDLWVQPK 124 R V PL A PVAH + ++ +S L + L +PK Sbjct: 68 PSRQVGAEPL--AQFAPVAHRLPMLSLENAFNEGEISDFLLRLGRFLHTDQVPALHAEPK 125 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV----SGPLANSTLQGE 180 +DG+AV LVY DG +RG+G GE+ T ++ I+ +P+ + + P A ++GE Sbjct: 126 LDGLAVELVYEDGLFTLGSTRGDGFTGENITANLATIATIPRRLKTGGNPPPARLEIRGE 185 Query: 181 IFL---------QREGHIQQQMGGINARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQ 230 + L +R G + + N R AG + + D + T + L F + D Sbjct: 186 VCLSITGFKELNRRRGEAGESLFA-NPRNAAAGSLRQLDPAITADRPLEFFAYGAADSAA 244 Query: 231 L----MSDRLKELATAGFTLTQTYTRAVKNADE-VARVRN-EWWKAELPFVTDGVVVRAA 284 L + L++L G L + R + + +A R + + ++P+ DG+V++ Sbjct: 245 LAVTTQAQLLEQLHAFGLQLI-PHGRVCPDLETALAHFRFLDEQRRQMPYEIDGMVLK-V 302 Query: 285 KEPESRHWLPGQA---EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + + L +A W VA K+ V ++ ++F VG++G ++ VA L PV + Sbjct: 303 NDLALQKRLGAKARSPRWAVAAKFAAVQAATKLIGVEFQVGRTGAVTPVAVLEPVKVGGV 362 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAERTKPTPPENRFN 398 V R + + + D+ D +LV AG+ IP + V RG E+ P N Sbjct: 363 LVSRATLHNEDEIKRKDLRLHDTVLVQRAGEVIPEVVKPVADKRRGDEKPIQLPA----N 418 Query: 399 SLTCYFA-------------SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRF 445 C A + C Q + L+ +K L +DG+G+ L QT Sbjct: 419 CPECDHALIRKEGEAVRRCPNPQCPAQRLRSLIHFCSKAGLDIDGLGKKAVELLVQTGLV 478 Query: 446 EHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL---TRAALN 502 I L PEQL PG + +A++ A+ R + A+GI A + Sbjct: 479 GDIPDIYRLRPEQLAPLPGWGEKSAAKVCDAIAAAKSPKLARLLAALGIRHVGEVNAQVL 538 Query: 503 ASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN-------AQIKKLGSWLAAQQ 554 A S L + E+ + ++ G GS A ++ + ++ AQ+K+LG ++ ++ Sbjct: 539 ARHFPSLEALQQAMEEDFLEVEGIGSQVAASLVTFFKDPTTTAMLAQLKELGLTISPEE 597 >UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKI9_9FIRM Length = 675 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 120/526 (22%), Positives = 223/526 (42%), Gaps = 75/526 (14%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-----GSEPRDVM-- 83 ++E++ L++ I+ ++ Y+ E E+ D YDQL RL + + + P V+ Sbjct: 14 KKELTELRKTIRYHNNRYYNEDNPEISDYEYDQLMLRLKAIEAKYPELITKNSPTQVVGG 73 Query: 84 --MPPLNGAVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVYR 135 V H V ++ + K + ++ E + V+ K+DG+++ L Y Sbjct: 74 QARRTAGVLVKHDVPMLSLQDVFSKEEIFAFVEELQQELEAPEFVVEEKIDGLSMALRYE 133 Query: 136 DGKLNKAISRGNGL-KGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 DG+L +AI+RG+G+ +GED T+ +I V + + L ++GE++++++ Sbjct: 134 DGELVRAITRGDGIVQGEDVTENAKVIHDVKKKLKDKLPYFEIRGEVYMEKKA-----FD 188 Query: 195 GINARAKVAGL------------MMRQDDSDTLNS--LGVFVWAWPDGPQLMSDRLKELA 240 +NAR ++ GL +RQ DS L +F++ Q R Sbjct: 189 AVNARQELLGLKPFANPRNCAAGTLRQLDSRITKERHLSLFIFNL----QTARGRTFTTH 244 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWWKA---------ELPFVTDGVVVRAAKEPESRH 291 T + + V + +V +E W+A LP+ DG VV+ + R Sbjct: 245 TEAYDFMKKQGIKVIHGYKVCHTADEVWQAITAIGENRGNLPYDIDGAVVKLNNLAD-RE 303 Query: 292 WLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 L A+ W +A+KY P + ++ I+ +VG++G+I+ A P+ L V+R + Sbjct: 304 KLGATAKVPRWAIAYKYPPEEKETVIRKIELSVGRTGRITPTAVFDPIRLCGTTVERATL 363 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFA--- 405 + D+ GD + V +G+ IP++ +VV + +P E TC Sbjct: 364 HNQDFIDNLDVRIGDTVRVYKSGEIIPKVKEVV----KEKRPAGTEPFVIGTTCPVCGAP 419 Query: 406 -------SDV------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 SD+ C Q S ++ + + + G+GEA L + I Sbjct: 420 AVREPDTSDIKCKNPSCPAQLESHILNFVGRSAMDIKGLGEAAIHRLIEDGFIATIADLY 479 Query: 453 LL--TPEQLQNTPGIAKSKSA-QLWHQFNLARKQPFTRWVMAMGIP 495 L E+L I K K+ ++ +++ R + +GIP Sbjct: 480 RLGGKREELIEKGIIGKEKNTDKVLAAIEASKENEPQRLLTGLGIP 525 >UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=DNLJ_RHOBA Length = 706 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 130/507 (25%), Positives = 216/507 (42%), Gaps = 75/507 (14%) Query: 35 SRLQQ---QIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA- 90 SR+QQ +I + + Y+ + E+ D YDQL A LTQ + R L G Sbjct: 14 SRVQQLVDEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENDHPDLRRPDSPTQLVGGD 73 Query: 91 -------VMHPVAHTGVRKMVDKNALSLWMRE-------RSDLW-VQPKVDGVAVTLVYR 135 V H V + + L+ M S W ++ K+DGVA ++ Y Sbjct: 74 VVDQLVQVPHRVPMLSIDNTYSREELAAAMERIEKSLEGESVAWTMEYKIDGVAGSIRYE 133 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-GPLANSTL-----------QGEIFL 183 +G+L A++RGNG G+D T V I +P++++ LA+ + +GE+++ Sbjct: 134 NGELTLALTRGNGQVGDDITHNVRTIRELPRSIADAALAHPEVAGGNVPEVLEVRGELYM 193 Query: 184 QR----EGHIQQQMGG----INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQL---M 232 + +++Q G N R AG +R D S + + G + Sbjct: 194 TDADLADLNVRQTDAGHEPFKNTRNVTAG-TIRLLDPKIAASRNIRFFCHGSGELVGVRA 252 Query: 233 SDR---LKELATAGFTLTQTYTRAVKNADEV-ARVRNEWWKAELPFVTDGVVVRAAKEPE 288 SD L+ + G + R D + A + E +LPF DG+V + E Sbjct: 253 SDHMTFLQHVQALGIPIAPDVVRFENKEDALQAIAKLELEMPDLPFEIDGIVFKV-DSFE 311 Query: 289 SRHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 R L +++ W++A+K++ + ++AI VGK+G I+ VA L PV + D V R Sbjct: 312 QREKLGVRSKSPRWVIAYKFERYEAITTLEAIDVQVGKTGTITPVAYLTPVDIADTTVSR 371 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLT-CYF 404 ++ + + D+ GD ++V AG+ IP++ V RTKP P +F T C Sbjct: 372 ASLHNADEIERLDVRVGDTVVVEKAGKIIPKV--VRVEKHARTKPLP---KFEFPTHCPQ 426 Query: 405 ASDV----------------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 +V C Q RLV+ G++ + +DG+GE L Q E+ Sbjct: 427 CDEVLTRDEGGVYIRCTNPACPAQLRQRLVYFGSRTGMDIDGLGEEVVDLLLQKELVENY 486 Query: 449 FSWLLLTPEQLQNT--PGIAKSKSAQL 473 L ++L P + K K ++ Sbjct: 487 ADLYRLNVDELAELTWPRLRKGKGDEM 513 >UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9NEIS Length = 797 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 121/550 (22%), Positives = 218/550 (39%), Gaps = 89/550 (16%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQ------RCFGSEPR 80 P +AQ++I L Q+ Q+ +Y+ V D YD+L L + R S Sbjct: 20 PQQAQQKIQTLTAQLNQYAHEYYTLDAPTVPDSEYDRLYRELEALETEYPQFRLPESPTN 79 Query: 81 DVMMPPLNG--AVMHPVA-------------------HTGVRKMVDKNALSLWMRERSDL 119 V L+G V+H V H +R D+ ++ Sbjct: 80 RVGGAVLDGFETVIHAVPMLSLANAFSPRDDEAGTFDHAEMRAF-DERVCKDLGAAHTEY 138 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ- 178 ++PK DG+A++L+Y++G L +A +RG+G GED T+ + + +P + G ++ Sbjct: 139 IIEPKFDGLAISLLYQNGILIQAATRGDGTTGEDVTENIKTVRNIPLRLHGDEVPDLIEV 198 Query: 179 -GEIFLQREGHIQQQMGGINARAKVAGLM------------MRQDDSDTLNSLGVFVWAW 225 GE+ + ++ +NAR AG +RQ +S + + + Sbjct: 199 RGEVLM-----LKADFAALNARQLDAGQKPFANPRNAAAGSLRQLNSAITAQRKLHFFGY 253 Query: 226 PDG--------PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFV 275 P+ + ++ LA GF+ Q R N EV + +LP+ Sbjct: 254 GIARLSTAFRQPENHAQEIELLARLGFSEPQAQIRVCANIQEVLDFYETMAQQRPQLPYE 313 Query: 276 TDGVVVRAA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DG+VV+ ++ + ++ W +A K+ + V+AI VG++G I+ VA L Sbjct: 314 IDGMVVKVNDLRQQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGSITPVARL 373 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRG--------- 384 PV + V + + D+ GD ++V AG IP + VV Sbjct: 374 KPVFVGGVTVTNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVVLERRPMRNVDLL 433 Query: 385 AERTKPTPPENRFNSLTCYFASD-----------------VCQEQFISRLVWLGAKQVLG 427 ER +P P R TC VC+ Q L+ +++ + Sbjct: 434 GERQEPQHPAFRLPE-TCPVCGSAVEREIGEAVARCTGGIVCKAQRAQGLIHFASRKAMD 492 Query: 428 LDGIGEAGWRALHQ---THRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQP 484 + G+G+ AL + H F I+ + + ++++ A + + +R+ P Sbjct: 493 IVGLGDKQIEALVEQDVLHSFADIYQLDIAKLQTIKDSKSGANKWTHNILDAVAASRQPP 552 Query: 485 FTRWVMAMGI 494 R++ A+GI Sbjct: 553 LARFLFALGI 562 >UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU Length = 666 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 128/525 (24%), Positives = 216/525 (41%), Gaps = 78/525 (14%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP----- 85 ++ I L++ I+ + Y+ K E+ D YD RL Q R ++++P Sbjct: 5 KQRIMELRELIRYHNYRYYVLDKPEISDAEYD----RLLQELRALEEAHPELIIPDSPTQ 60 Query: 86 PLNGAVMH----PVAHTGVRKMVDKNALS-------------LWMRERSDLWV-QPKVDG 127 + A++ PV H R NA S RE S +V + K+DG Sbjct: 61 TVGSAILETPFTPVPHP-TRMYSLGNAFSQDDIADFEASINRFLGREESREYVLEYKIDG 119 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQ--- 184 ++V L+Y +G + ++RG+GL GED T + I +P+ + PL + ++GEI+L Sbjct: 120 LSVNLIYEEGVFRQGLTRGDGLTGEDVTPNLLAIPDIPRQLPQPL-DLEVRGEIYLPIQT 178 Query: 185 -REGHIQQQMGG----INARAKVAGLMMRQDDSDTLNSLGV----FVWAWPD--GPQLMS 233 E + Q + G N R AG +RQ D S G+ + P+ G Sbjct: 179 FLELNTQLEEAGEPPFKNPRNAAAG-SLRQKDPRISASRGLRGLFYGVGRPESLGVGTQQ 237 Query: 234 DRLKELATAGFTLTQTY--TRAVKNADEVARVRNEWWKAELPFVTDGVVVR--------- 282 + L++L GF++ Y R V+ ++ + K+ LPF DGV V+ Sbjct: 238 ELLEKLGQLGFSVDPHYQVVRGVEGIEQGYQAMLAARKS-LPFEADGVTVKLNNLSLWSE 296 Query: 283 ---AAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 AK P + +A+K+ + V + F VG++G+++ VA L PV LD Sbjct: 297 LGYTAKTPR----------FAIAYKFPAEEKTTRVLRVIFQVGRTGRVTPVAELEPVFLD 346 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP-----PE 394 V RV + + QE + GD +LV +G IP + VV P PE Sbjct: 347 GSTVSRVTLHNESYVQELGLRIGDTVLVHKSGGVIPEVLRVVTEAPRGHAPVEWPTHCPE 406 Query: 395 N----RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 + + +C + + +++ + + G+GE L +T Sbjct: 407 CGTALELSGKIHLCPNPLCPAKAFEAIRHFASRRAMDIQGLGEKLIEQLLETGLVRDAAD 466 Query: 451 WLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L E + A+ + L Q ++ + R + A+GIP Sbjct: 467 LYNLKKEDIAALERKAEKSAQNLIEQIEASKSRGLERLLFALGIP 511 >UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepID=DNLJ_MYCGA Length = 717 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/461 (20%), Positives = 201/461 (43%), Gaps = 56/461 (12%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-------------GS 77 +E I L +++ +W+ +Y+ V D VYD L ++R + GS Sbjct: 12 KEIIEDLVKKLTKWEHEYYVLSNPSVSDEVYDNTYRTLLGYERKYPQYVLSYSPTQRVGS 71 Query: 78 EPRDVMMPPLNGAVMHPVAHT-GVRKMV--DKNALSLWMRERSDLWVQPKVDGVAVTLVY 134 + + + +M + + +++ ++N + +E + ++PK+DG++++L+Y Sbjct: 72 SISNKFIKVKHDYLMLSLGNCFNFEELLNFNENIAKISKQEDNPYVLEPKIDGLSISLIY 131 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 DG L++A++RG+G+ GE + I +P ++ + ++GE+++ Q Sbjct: 132 LDGVLSEALTRGDGVFGESVIANIKTIKTIPLKINTTIKKIVIRGEVYVS-----NQDFE 186 Query: 195 GINA-----------RAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQLMSDR----LKE 238 INA R +G + D S+ L F + P+ +L + +++ Sbjct: 187 AINASRDEDKKFANSRNYASGSLRNIDVSEVAKRKLNAFFYYIPNAYELGFETQYQVIQQ 246 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAA--KEPESRHWLP 294 L GF + + + N E+ E K +L + DG V++ K+ E + Sbjct: 247 LKEWGFNVAKE-IKLFSNIKELYTSLKELENNKNKLDYRIDGAVIKYNNFKDYEIIGYTS 305 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 +W +A+K+ P ++K I VG++GK++ VA LAP+ L+ + + ++ Sbjct: 306 KFPKWAIAYKFAPTQVQTQLKDIILNVGRTGKLTFVAQLAPIELEGSIITYATLHNLEYI 365 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC------------ 402 + DI D + + A + IP++ V E +N +C Sbjct: 366 NDLDIRINDYVYLIKAAEIIPKVIGVNL-DKRPNNAKKLEFDYNCPSCHQPLVKKPEEVD 424 Query: 403 -YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 Y D C+++ + L++ +K ++ ++G+ E+ T Sbjct: 425 WYCIYDQCKQKQLQYLIYYCSKPIMNIEGLSESTLALFFNT 465 >UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB60_9BACT Length = 658 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 109/417 (26%), Positives = 187/417 (44%), Gaps = 44/417 (10%) Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ- 178 V+PKVDG+AV+L+Y +G + +RG+G +G++ T + + ++P + G A L+ Sbjct: 10 LVEPKVDGLAVSLLYENGVFTRGATRGDGERGDEITDNLKTLRSIPLRLHGKGAPEVLEV 69 Query: 179 -GEIFLQREG--HIQQQMGGI------NARAKVAGLMMRQDDSDTLNS-LGVFVWAWP-- 226 GE++L G I+++M NAR AG + + D + L + ++ Sbjct: 70 RGEVYLPVAGFQRIREEMIAAGEEPFANARNTAAGTLKQLDPALVAKRPLEIVLYGLGEI 129 Query: 227 --DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVR 282 D P + L+ + G T +TR A+EV + +E + F TDG V++ Sbjct: 130 SVDPPPTQAALLEWMKAFGLR-TPKFTRVCHTAEEVMKAIDELDSIRDGFGFETDGAVIK 188 Query: 283 --AAKEPESRHWLPGQAEWLVAWKYQPVAQVAE--VKAIQFAVGKSGKISVVASLAPVML 338 + ++ E + +W AWKY V++ AE +++I VG++G ++ VA L PV L Sbjct: 189 LNSIEQRERVGYHSRAPKWAKAWKY--VSEQAETVLESITIQVGRTGVLTPVAELRPVFL 246 Query: 339 DDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTPPE- 394 + R + + + DI GD +L+ AG+ IP + VV + + P P E Sbjct: 247 RGSTISRATLHNEDEIKRKDIRIGDTVLIEKAGEVIPAVVKVVLEKRPSSAQPFPFPHEC 306 Query: 395 -------NRFNSLTCYFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 R + + +V C Q RL + + L +DG+G L + Sbjct: 307 PVCHSQAKRDPNFAVWVCENVNCPAQLTRRLEYFAKRGALDIDGLGGIVADKLVERSLVR 366 Query: 447 HIFSWLLLTPEQL-------QNTPGIAKSKSA-QLWHQFNLARKQPFTRWVMAMGIP 495 L EQL + P + K+A ++ A+ QP RW+ A+ IP Sbjct: 367 DPLDLFELKLEQLATLNLGTDDEPRVFGEKNATKVTEAIKRAKTQPLARWLHALAIP 423 >UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidans RepID=DNLJ_ACIF2 Length = 671 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 143/571 (25%), Positives = 237/571 (41%), Gaps = 80/571 (14%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYD-------QLSARLTQWQRC------FGSE 78 E I +L+ ++ ++ Y++E + D YD L R QWQ G+ Sbjct: 10 ERIQQLRAELVAANNAYYREDSPTLSDAEYDARLRELRTLEDRNPQWQSADSPTQRVGAA 69 Query: 79 PRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGVAV 130 P +V G V + + T + + D++ S W+ RE L +PK DG++V Sbjct: 70 PVEVF-----GEVHYAIPLTSLDNVFDQDGFSDWLARVQKGLGREDVPLSAEPKFDGLSV 124 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQ---- 184 + Y +GKL +A +RG+G GED T V I VP ++G L+ GE+ + Sbjct: 125 NIRYIEGKLVQAGTRGDGQTGEDVTANVRTIRNVPLQLTGKDWPELLEVRGEVVIPVAAF 184 Query: 185 REGHIQQQMGG----INARAKVAGLMMRQDDSDTLNS-LGVFVWAW-----PDGPQLMSD 234 R + ++ G N R AG + + D S T L F W W P G ++ Sbjct: 185 RRLNGERLRAGDNPFANPRNAAAGSLRQLDSSVTAKRPLAYFPWGWGESSVPLGKSHIA- 243 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVRAAKEPESRHW 292 ++ L+ GF +T +Y R V E R +E K +PF DG+V + + +R Sbjct: 244 VMERLSAWGFEVT-SYLRGVHELTECQRYFSEMQKIREGMPFEIDGLVFK-VDDLLAREQ 301 Query: 293 LPGQA---EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 L A W +A+K+ + V+ I +VG++G I+ VA L PV + V R ++ Sbjct: 302 LGFTARAPRWAIAYKFPAHEERTVVEDILASVGRTGVITPVAVLKPVQVGGVTVSRASLH 361 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV----------WRGAERTKPTPPEN-RFN 398 + DI GD +LV AG IP + V+ W +R E R Sbjct: 362 NQDEVDRKDIRVGDTVLVRRAGDVIPEVVMVIKEERPPATQPWHMPQRCPVCGSEVLRLA 421 Query: 399 SLTCY--FASDVCQEQFISRLVWLGAKQVLGLDGIGE------AGWRALHQTHRFEHIFS 450 + + + C Q + + +++ + + G+GE G +H H+ Sbjct: 422 NESAHRCMGGLYCPAQRMGAIRHFASRRAMDIRGLGEKLVEQLVGHGLVHTVADIYHLDE 481 Query: 451 WLLLTPEQLQNTPGIAKSKSAQ-LWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSW 509 L E++ S+SAQ L + + +R R++ A+GI S + Sbjct: 482 AALCGLERM-------ASRSAQKLLAEIDRSRHTSLPRFLYALGIRQVGEGTAKSLAIYF 534 Query: 510 SQ---LLFSTEQFWQQLPGTGSGRARQVIEW 537 L+ +T + Q +P G A V + Sbjct: 535 GDLDPLMAATPELLQNIPDVGPIVAESVAHF 565 >UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=DNLJ_AYWBP Length = 671 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 108/410 (26%), Positives = 185/410 (45%), Gaps = 40/410 (9%) Query: 119 LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ 178 L + K+DGVA++L Y+ G L +A++RGNG+ GED T+ I +P ++ L + ++ Sbjct: 110 LLTELKIDGVAISLKYQKGILVRALTRGNGIWGEDVTKNAQTIKTIPLRLNEDL-DLEVR 168 Query: 179 GEIFLQR------EGHIQQQMGGI--NARAKVAGLMMRQDDSDTL--NSLGVFVWAWPDG 228 GEI+L +Q+ + N R +G +RQ +S + +L +FV+ D Sbjct: 169 GEIYLSHPDFEKLNAQRKQENKPLFSNPRNAASG-TLRQLNSAVVAKRNLSIFVYGIAD- 226 Query: 229 PQLMSDRLKE----LATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVR 282 P L KE L GF T + V N + + V ++ K +L + TDG+V++ Sbjct: 227 PYLTKPTQKETLVFLTALGFA-TNPHHYFVSNFENLLSVIEKYKSIKEQLTYDTDGIVIK 285 Query: 283 AAKEPESRHWLPGQA----EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVML 338 + H L G W A+K+ + + ++ I F VG++G I+ V + PVM+ Sbjct: 286 INEL--VFHSLIGATAKAPRWATAYKFATITSQSIIQNIIFQVGRTGVITPVCEIMPVMV 343 Query: 339 DDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV-WRGAERTKPTPPENRF 397 D V +V + + + DI D ++V AG IP I +V+ + + KPT + Sbjct: 344 DGSLVSKVFLHNYDYICKKDIRIKDHVIVHKAGSVIPEILEVIKSKRTDLQKPTLMIEKC 403 Query: 398 NSLTC----------YFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 S YF + C+EQ I +L+ +K + ++ +GE + Sbjct: 404 PSCKTILEKQPGGIDYFCLNPNCREQKIQKLIHFVSKNAMDINVLGEQTIITFFDKNLIT 463 Query: 447 HIFSWLLLTPEQ--LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 LL Q LQ G K + ++++ F + A+GI Sbjct: 464 KPSDLYLLKNHQHILQEISGFGAKKITNILDAIEASKQKGFEDVLFALGI 513 >UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 Length = 671 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 132/579 (22%), Positives = 244/579 (42%), Gaps = 82/579 (14%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------------- 75 +A++EI RL + + Y++E + E+ D +DQL +L + F Sbjct: 5 QARKEIKRLTALVAYHNKLYYEEAQPEISDYEFDQLLEKLIALENQFPDLRLPNSPTQRV 64 Query: 76 GSEPRDVMMPPLNGAVMHPVAHTGVRKMVD---KNALSLWMRERSDLWVQPKVDGVAVTL 132 G EP + M +++T + V K A + + + K DGVA++L Sbjct: 65 GGEPSKKFATVYHQYPMLSLSNTYSAEEVMQFVKRAHKQLPGATIEFFCELKFDGVAISL 124 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG---PLANSTLQGEIFL------ 183 +Y++GKL+K ++RG+G KG+D T+ I +PQ + P A ++GE F+ Sbjct: 125 LYKEGKLDKVVTRGDGFKGDDITENAKQIPNIPQIIEHKDLPPAFE-VRGEAFMSLADFE 183 Query: 184 ----QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKEL 239 R H + + N R AG + TL S G W L+S + +L Sbjct: 184 KLNRDRLAHGLEPLA--NPRNATAGTL------KTLKSTGPKRWLDCYMYSLLSTDM-DL 234 Query: 240 ATA----------GFTLTQTYTRAVKNADEVARVRNEWW---KAELPFVTDGVVVRAAKE 286 T F ++ TY + + +A + E+W K LP DGVV++ Sbjct: 235 PTHEVCIQWLEKWCFHVSPTYKKCRTLEEVMAYI--EYWESAKNSLPVAIDGVVIKVNDT 292 Query: 287 -PESRHWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 +++ L ++ W +A+KY+P ++++ + VG++G I+ VA L P++L V+ Sbjct: 293 LQQNKLGLTAKSPRWAIAYKYKPENLATILESVDYQVGRTGVITPVAHLKPILLAGTIVK 352 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI--DDVVWRGAERTKP-----------T 391 R + + Q D+ GD + + G+ IP+I DV R + ++P T Sbjct: 353 RATLHNAGEIQRLDLHLGDTVFIEKGGEIIPKITGTDVSKRSLD-SEPVKFVTHCPACGT 411 Query: 392 PPENRFNSLTCYFASDV--CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ---THRFE 446 R+ Y+ + C Q L ++ + + IG+ L H Sbjct: 412 ELVKRYEK-ALYYCPNTKGCPYQLQGLLKHFVHRKAMDIRSIGKQTIEMLINRGLVHTPA 470 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDE 506 ++S L + +++ G + + ++++PF R + A+GI + Sbjct: 471 DLYS---LKYQDIRSLEGFKDLATRNVLSGIESSKQRPFERVLFALGIRHVGEVIADKIT 527 Query: 507 RSWSQ---LLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 + ++ L +T + +P G+ A V + EN + Sbjct: 528 QYYTDIDTLSNATVEDLIAIPFIGTEIAHSVTNYFENPE 566 >UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=DNLJ_ACIC5 Length = 677 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 130/537 (24%), Positives = 233/537 (43%), Gaps = 80/537 (14%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM 84 S A A ++I L++ I+ + Y+ + + E++D +D+L +L QR P +++ Sbjct: 1 MSHASAAQQIESLRESIRHHEYLYYVQDQPEIDDLAFDELMRKL---QRLEAEHP-ELIT 56 Query: 85 P----------PLNG--AVMHPVAHTGVRKMVDKNALSLW---MRERS------DLWVQP 123 P P G V H + + + L W +RE++ + + Sbjct: 57 PDSPTQRVGGKPKEGFAKVAHSRPMLSLDNVNSEEELRDWERRVREQAGQNAEIEYVCEY 116 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-GPL------ANST 176 K+DG+++ L YRDG+L + ++RG+G GED T V I +VP +++ G L AN Sbjct: 117 KLDGLSMALHYRDGQLARGLTRGDGEIGEDVTTNVRTIRSVPLSIADGKLQQAKMPANFE 176 Query: 177 LQGEIFL----------QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAW- 225 ++GE+ + +RE Q + A +R + + + + +A+ Sbjct: 177 VRGEVVMPFTAFEKLNEEREA---QGLAPAANPRNAAAGTIRTLEPNIVAQRRLDFYAYF 233 Query: 226 ------PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARV--RNEWWKAELPFVTD 277 D + L LAT GF + Q + A K+ + V R E ++ L + D Sbjct: 234 ALTEKGEDAFGEQEEALDALATLGFRVNQ-HRHAAKSIETVVEFVNRAEEHRSRLGYEID 292 Query: 278 GVVVRAAKEP-ESRHWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 GVVV+ + R G+A W VA+K+ + V +V+ IQ VG++GK++ VA LAP Sbjct: 293 GVVVKVNSAVLQRRLGYTGRAPRWAVAYKFAARSGVTQVEDIQVQVGRTGKLTPVAWLAP 352 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-----RGAERTK- 389 V + V R + + + + GD + + G IP++ +VV RG + Sbjct: 353 VQVGGTTVTRATLHNADEIERLGLRIGDFVRIERGGDVIPKVVEVVDDAEHPRGTKHFHF 412 Query: 390 ------------PTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 TP E + + C + L+ ++ V+ ++G+GEA Sbjct: 413 PHACPACGSEVVRTPGEADYRCVNTD-----CPARLRESLLHFASRGVMNIEGMGEAIVM 467 Query: 438 ALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 L + + LT EQL + + K + L + + +R+ P R + +GI Sbjct: 468 QLLGRGLVKTVSDIYSLTEEQLVSLERMGKKSATALLGEIDKSRQAPLDRVLFGLGI 524 >UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 Length = 720 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 134/537 (24%), Positives = 218/537 (40%), Gaps = 74/537 (13%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-GSEPRDVMM 84 SPA A E L Q+I D Y++E V D YD L R + F G D + Sbjct: 25 SPAEAASEHKALAQEITGHDAAYYREDAPVVSDAEYDALRHRYEAIEERFPGLRGEDSLS 84 Query: 85 PPLN-------GAVMHPVAHTGVRKMVD-----------KNALSLWMRERSDLWVQPKVD 126 + G V H V + K L+L + +PK+D Sbjct: 85 EKVGAAPSEKFGKVAHKVPMLSLANCFSDEEVVEFVARVKRFLNLGPDDEVAFTCEPKID 144 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL--QGEIFL- 183 G++ +L Y +G+L A +RG+G +GED TQ V I+ +P+ ++G T+ +GE+++ Sbjct: 145 GLSCSLHYENGRLTVAATRGDGSQGEDVTQNVRTIADIPERLAGKGVPQTIDVRGEVYMA 204 Query: 184 --------QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLMSD 234 R+ ++++ N R AG + + D S T + L F +AW + L ++ Sbjct: 205 KADFEALNARQAAAEEKVFA-NPRNAAAGSLRQLDSSITASRPLKFFAYAWGEASDLPAE 263 Query: 235 R----LKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAKEPES 289 ++ A GFT A A +A R+ E +A L + DGVV + Sbjct: 264 TQFGVVEAFARWGFTTNPLMVVAKDAAGLIAHYRSIEAQRALLGYDIDGVVYKVNSLELQ 323 Query: 290 RH--WLPGQAEWLVAWKYQPVAQVAEV-KAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 R ++ W +A K+ P Q V + I+ VG++G ++ VA L PV + V Sbjct: 324 RRLGFVSRSPRWAIAHKF-PAEQATTVLEDIEIQVGRTGALTPVAKLTPVTVGGVVVSSA 382 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPT---PPENRFNSLTC- 402 + + D+ GD ++V AG IP++ V+ E +P P E + C Sbjct: 383 TLHNEDEIARKDVRIGDTVVVQRAGDVIPQVVRVI----EEKRPAGSKPYEFPTHCPACG 438 Query: 403 -------------------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ-- 441 +C Q + RL ++ ++G+GE RA ++ Sbjct: 439 SHAVREVDTKSGKVDAVRRCTGGLICPAQMVERLRHFVSRNAFDIEGLGEKQVRAFYEWG 498 Query: 442 -THRFEHIFSWLLLTPEQLQ---NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 IF+ LQ N G K+ +A L+ R R+V A+GI Sbjct: 499 LIASPADIFTLETRNARSLQRLENRDGWGKTSAANLFAAIAERRTVAVDRFVFALGI 555 >UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R586_9CHLA Length = 668 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 110/458 (24%), Positives = 189/458 (41%), Gaps = 44/458 (9%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEI 181 K+DG+A++ + G + I+RG+G KG+D TQ + ++A P + GP A L+ GEI Sbjct: 116 KMDGIAISAQFEKGIFVRGITRGDGKKGDDITQNLRTVAAFPLQLIGPSAPDFLEVRGEI 175 Query: 182 FLQREG----HIQQQMGG----INARAKVAGLMMRQDDSDTLNSL--GVFVWAWPDGPQL 231 F+ ++ + ++++ G N R AG + D ++T VF D Sbjct: 176 FMPKQVFQKLNAEKELEGEDLWANPRNAAAGSLKLLDPNETRRRKLDVVFYGIGQDSQDA 235 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW---------KAELPFVTDGVVVR 282 ++ + A L ++Y + + E E W +A LPF DGVVV+ Sbjct: 236 LTSQF-----ACHALLKSYGLPILHQVEKCHTLEEIWEFVEKVRTLRASLPFEIDGVVVK 290 Query: 283 AAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 E + W VA+K+ ++ +I VG++G ++ VA L PV L Sbjct: 291 LDSLAEQKRLGSTGKNPRWAVAYKFAAEQAETDIYSITVQVGRTGVLTPVAELKPVFLAG 350 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-RGAERTKPTPPENRFNS 399 + R + + DI GD +++ G IP++ V + + + P S Sbjct: 351 STIARATLHNEEEVLRKDIREGDSVIIEKGGDVIPKVVSVNFDKRKSDSHPWKMPTHCPS 410 Query: 400 LTCYFASDV------------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEH 447 A V C EQ + RL++ K + ++ +GE L + + Sbjct: 411 CGALVARSVDEVAVKCPNTLHCPEQQLRRLIYFAGKFAMDIEHMGEKVVEQLVRLGFVKR 470 Query: 448 IFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNAS 504 LT EQL G L ++ F+R++MA+GI A L A Sbjct: 471 PSDIYALTSEQLFQLEGFKTKSVENLITSIEKSKDVSFSRFIMALGIKHVGEGTAELLAK 530 Query: 505 DERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 + L+ T + Q+ G G A ++E+ +A+ Sbjct: 531 RAGNVHILMQMTTEELLQIEGIGEKVATAIVEYFADAR 568 >UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 Length = 726 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 128/527 (24%), Positives = 220/527 (41%), Gaps = 69/527 (13%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDVMMPPL 87 + L++QI+ + Y+ + + D YD L L + S + V PP Sbjct: 10 VEALREQIRYHNYRYYVLDEPVISDAEYDALMRELRALEAAHPELVTPDSPTQRVGAPPG 69 Query: 88 N--GAVMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKVDGVAVTLVYRD 136 V H V + D+ + W R V+PK+DG+AVTL+YR+ Sbjct: 70 EQFAKVQHVVPMLSLANASDEAEVRAWYDRVVRLLGNDARVAFVVEPKIDGLAVTLIYRN 129 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVP-------------------QTVSGPLANSTL 177 G L + +RG+G GED T + I +P Q V PL + Sbjct: 130 GILVRGATRGDGETGEDVTANLRTIPGIPLRLGAFASNPEGQTNGAPVQAVIPPLIE--V 187 Query: 178 QGEIFLQREG--HIQQQMG------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-- 226 +GE++++ + +Q+ N R AG + ++D + T L F + Sbjct: 188 RGEVYMRIADFLRLNEQLAASGEKVAANPRNAAAGSLRQKDPAITARRPLRFFAYGIGQI 247 Query: 227 DGPQLMS--DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVR 282 +G Q+ + + L L T GF + + R + D +A R EW + EL + DGVV++ Sbjct: 248 EGVQVQTQWETLNLLRTLGFPVNRDARRFERLDDALAYCR-EWMTRRDELEYEVDGVVIK 306 Query: 283 A-AKEPESRHWLPGQ-AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 + +++ + G+ W +A+K+ V+ + I VG++G I+ A + PV + Sbjct: 307 IDSLAQQAQLGVVGRDPRWAIAFKFPAREAVSRLIDIVVNVGRTGVITPNAVIEPVNIGG 366 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI-DDVVWR--GAER------TKPT 391 V+ ++ + E DI GD ++V AG IP I +V R G+ER T P Sbjct: 367 VTVRNASLHNADYIAERDIRIGDYVIVKRAGDVIPYIVGPIVARRDGSERPWQMPATCPA 426 Query: 392 --PPENRFNSLTCYFASD--VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEH 447 P R Y + +C Q R+ ++ + + GIGE + + + Sbjct: 427 CGTPLERAEGEVAYRCPNFGICPAQITRRIEHFVSRGAMDIAGIGEKQVQLFVERGWVQD 486 Query: 448 IFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + LTP+ N G + A L ++ +P R ++ +GI Sbjct: 487 VADLYTLTPDHFANVEGYGPKRVANLLSAIAGSKNRPLHRLIVGLGI 533 >UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepID=D2AQV6_STRRD Length = 696 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 131/580 (22%), Positives = 233/580 (40%), Gaps = 85/580 (14%) Query: 48 YWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP------LNGAVMHPVAHT--- 98 Y+ +G S ++D YD RL + + + +E D ++P GAV+ V HT Sbjct: 30 YYGDGTSTLDDDAYD----RLVRGIQAYEAEHPDEVLPTSPTGKVAGGAVVGDVPHTVPM 85 Query: 99 -GVRKMVDKNALSLWM--------RERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGL 149 + + L+ W R ++ V+PK+DG+A+ YR G+L + ++RG+G Sbjct: 86 LSLDNVFGAGQLADWAASLERRLGRPVTEWSVEPKLDGLAIAARYRGGRLVQLVTRGDGT 145 Query: 150 KGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL----------QREGHIQQQMGGINAR 199 GED + + I +P ++ P+ L+GE+ + +R+ H N R Sbjct: 146 AGEDVSHAIGTIVGLPARLAEPV-TVELRGEVMMTASQFEDACVKRQAHDGTTFA--NPR 202 Query: 200 AKVAGLMMRQDDSDT--LNSLGVFVWAWPDGPQLMSDRLKEL------------------ 239 + AG + QD L G +PD + +L+EL Sbjct: 203 SAAAGTLRAQDRPYVCELTFFGYGALPYPDDTSEQAVQLRELPHSEVMTWVAGQGVQTPA 262 Query: 240 -ATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRA--AKEPESRHWLPGQ 296 G + T + + +++A R ELPF DG+V++ A + + Sbjct: 263 VTDVGGIVATTLEQIQERVEQIAAKRT-----ELPFGIDGIVIKCDLAADQAQAGFSSRA 317 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K ++ ++ +++ G+SG I+ A L PV LD V + +V Sbjct: 318 PRWAIAYKLPATEKITKLLGVEWNTGRSGIIAPRAVLEPVELDGSIVTYATLHNVADITR 377 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTPPENRFNSLTCYFASDVCQE-- 411 + GD ++V AG IPR++ V G E+ P TC A D QE Sbjct: 378 RGLMLGDSVVVYKAGDVIPRVEAPVVHLRTGDEQPIAIPQ----VCPTCGDAIDASQERW 433 Query: 412 --------QFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 + I+ + + + L ++G+ E + L LT EQ+ Sbjct: 434 RCVRGRACRVIASIGYAAGRDQLDIEGLAENRIQQLLDAGLIVDFADLFYLTREQVLGLE 493 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDER---SWSQLLFSTEQFW 520 + + + L A+ QP +R A+G+ T +++ R S + + + Sbjct: 494 RMGATSTDNLLAAIERAKAQPLSRVFCALGVRGTGRSMSRRIARHFGSMDAIRAADAEAI 553 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + + G G +A V+ E ++ L L +T EP Sbjct: 554 EAVEGIGPKKAPGVV--AELVELADLIDKLVKAGVTMTEP 591 >UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR Length = 683 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 118/506 (23%), Positives = 208/506 (41%), Gaps = 51/506 (10%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQW----------QRCFGSEPRD 81 EE ++L+ QI D Y ++ K E+ D YD+L +L + Q G+ P + Sbjct: 9 EEFTKLRDQISYHDVLYHQKSKPEIADAEYDKLKQKLVEMEGQLPGACVTQDGVGAAPDE 68 Query: 82 VMM------PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYR 135 P L ++ + GV + + + + E +++ +PK+DG++ + VY Sbjct: 69 KFSKIKHREPML--SLENAYDEQGVERFLSR-IKRFLIEEEIEVFCEPKIDGLSFSAVYE 125 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 DG+ KA +RG+G GED T+ V+ I P+ + ++GEI++ ++ Sbjct: 126 DGRFVKAATRGDGFIGEDVTRNVATIKGFPRFLQDVQDRLEVRGEIYINNSDFLKLNKDN 185 Query: 196 --INARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQL-MSDRLKELATAGFTLTQTYT 251 N R AG + + D S T N L F ++ G + S+ L L + GF + + + Sbjct: 186 EFANPRNAAAGSLKQLDVSITANRPLKYFAYSLIGGKEKSQSEVLNRLESLGFCVNE-HR 244 Query: 252 RAVKNADEVARVRNEWWKA--ELPFVTDGVVVRAA-----KEPESRHWLPGQAEWLVAWK 304 N + N+ + L + DG+V + S H P A +A+K Sbjct: 245 SLTNNLSGMLEFYNKVYNCRYSLDYDIDGIVYKVNDLILQSRLGSTHKAPRSA---LAYK 301 Query: 305 YQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQ 364 + V ++ I VG++G ++ VA L PV + V R N+ + + D+ GD Sbjct: 302 FSAVYAKTKLNKIFIQVGRTGVLTPVADLIPVNIGGVLVSRANLHNQDEIKRKDVREGDI 361 Query: 365 ILVSLAGQGIPRI--DDVVWRGAERTKPTPPE----------NRFNSLTCYFASDVCQEQ 412 + + AG IP+I D R A+ PE ++ C C+ Q Sbjct: 362 VTIKRAGDVIPQIVRVDKGSRHADAPGFVFPEICPECGGKVQAEGAAIRCS-EELTCKAQ 420 Query: 413 FISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE----QLQNTPGIAKS 468 I +L +K + G+GE + + + I L L+ P + Sbjct: 421 IIGKLSHFVSKGAFDIFGLGEKQIKFFYDLGLIKQIPDIFNLEERLNEFSLKEQPDWGER 480 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGI 494 A L + R R++ ++GI Sbjct: 481 SIANLLNAIQNRRVITLDRFIFSLGI 506 >UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH Length = 714 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 113/484 (23%), Positives = 195/484 (40%), Gaps = 64/484 (13%) Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQT----VSGPLANST 176 V+PK DG ++LVY + +RG+G+ GED T + +I VP + V G + Sbjct: 138 VEPKFDGAGISLVYEKDMFVRGATRGDGVVGEDITPNIRVIKTVPLSAEFSVYG-IDRIE 196 Query: 177 LQGEIFLQRE-----GHIQQQMGG---INARAKVAGLMMRQDDSDTLN-SLGVFVWAW-- 225 ++GE+ + +E H + + G N R AG + QD + L FV+ Sbjct: 197 IRGEVLINKEKFKEINHQRLEEGLPPLANPRNAAAGSLRLQDPKEVAKRGLEAFVYQITY 256 Query: 226 ---PDGPQLMSDRL-------KELATAGFTLTQTYTRAVKNADEVARVRNEWWKA--ELP 273 DG L+ ++L K L GF + + DEV EW + + P Sbjct: 257 AVDKDGNNLLGNKLRYHYDSIKILYELGFKSPYKEIKVCRGIDEVIDYCREWERKRDDYP 316 Query: 274 FVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVA 331 + DG+V++ + W +A+K++ ++ + F VG++G ++ VA Sbjct: 317 YEIDGMVIKVNDISLYDRLGVTSHHPRWAIAFKFRARQATTKIIKVVFQVGRTGAVTPVA 376 Query: 332 SLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERT 388 L PV + V V++ + +E DI GD +L+ AG IP + VV G E+ Sbjct: 377 KLEPVEIGGVTVSSVSLINEDFIKEKDIRVGDLVLIERAGDVIPYVVKVVTEARTGKEKP 436 Query: 389 KPTPPEN-RFNSLTCYFASDV--------CQEQFISRLVWLGAKQVLGLDGIGEAGWRAL 439 P E S A + C Q + R+++ +K + + G+GEA R Sbjct: 437 IQFPKECPSCGSPLVKPAGEAVWRCININCPAQVVERIIYFASKDAMDIRGLGEANIRKF 496 Query: 440 HQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI----- 494 +Q I L +++ G + L ++ +P R + +GI Sbjct: 497 YQLGFLRSIPDIYRLPYDKIIQLEGFGQKSVENLKKAIEESKNRPINRLITGLGIRFVGK 556 Query: 495 ----PLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENA-------QI 543 L D + WS + ++LP G A + ++ N ++ Sbjct: 557 VTARTLAENINCVEDLKDWSV------EDLERLPDVGYVVAHSIYDFFHNPDNIKMIQEL 610 Query: 544 KKLG 547 K+LG Sbjct: 611 KRLG 614 >UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostridium difficile QCD-76w55 RepID=UPI00016C60E9 Length = 663 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 127/575 (22%), Positives = 247/575 (42%), Gaps = 101/575 (17%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDV 82 + +E+I L++++ + D Y K G + D YD+L +L + + S + + Sbjct: 3 KVEEKIRDLREEVIKHDLAYAK-GDPIISDTEYDKLYLKLVGLEELYPEYSDENSPTKRI 61 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD-LWVQPKVDGVAVTLVYRDGKL 139 + + G V H + +K+ + L ++R+ +D L V+ K+DG+ V Y +G L Sbjct: 62 IDIKVEGLKKVEHTIPMLSQKKINTPDELDKFIRQMNDELLVEDKLDGLTVIAKYNNGVL 121 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI--N 197 + I+RG+G G+D T V +P+T+ P + +++ ++ GI N Sbjct: 122 YEGITRGDGKIGDDITHIVLNTPNIPKTI--PFND-------------YLEIRLEGIIPN 166 Query: 198 ARAKVAGLMMRQDD---------SDTLNSLGVFVWAWPDGPQLMS--------------- 233 ++ ++ ++D S T+ SL V A G +L++ Sbjct: 167 EDFEMVNSILEEEDKYKSSRNLASGTVRSLNGCV-AKERGLKLIAFELVKADNIIFEKDY 225 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVR------NEWWKAELPFVTDGVVVRAAKEP 287 +RL+ L T GF + YT KN +++ +++ N+ + L + DG+V++A Sbjct: 226 ERLEFLKTLGFDVVN-YTLFKKNEEDILKLKDYIFSYNQEVRPFLSYKVDGLVIKA-NSL 283 Query: 288 ESRHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 E R L ++ W A+K++ + ++K VGKSG+++ VA PV +D + Sbjct: 284 ELRDSLGNTSKYPKWSSAFKFENEEAITKLKDCIIEVGKSGQLTPVALFEPVQIDGITIS 343 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAER-----------TKP 390 + + + + ++ DI GD ++V+ A IP+I+ + G E+ +P Sbjct: 344 KATLSNFKNVKDKDIKIGDMVVVARANDVIPKIEHSIKEDRTGEEKEIEIPKFCPVCNEP 403 Query: 391 TPPENRFNSLTCYFA-SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 EN YF +D C Q +++ +K+ L +DG+GE + I Sbjct: 404 IVKEN-----VHYFCVNDDCPAQIEGKIIHFVSKKSLDIDGLGEESIKLFLDNGLISSII 458 Query: 450 S--WLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT--RAA----- 500 +L + L A K + L +++ ++ + + I L RA+ Sbjct: 459 DIFYLKDKKDDLLKLDKYADKKVSNLLENIEASKQASLSKILHGLSIKLIGGRASKELAN 518 Query: 501 --------LNAS-DERSWSQLLFSTEQFWQQLPGT 526 LN S +E + Q + S F +++ Sbjct: 519 KFISMKNILNISKNEEEFKQSILSINNFGEEMSNN 553 >UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriaceae RepID=C7N3E3_SLAHD Length = 708 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 139/581 (23%), Positives = 238/581 (40%), Gaps = 89/581 (15%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR--DVMMPP--LNG 89 I L+++I+ Y+ + E+ D +D L L + + + P+ D P + G Sbjct: 23 IDALRKEIEHHTYLYYAKDAPEISDAAFDSLMRELRELEL---ANPQYIDPTSPTQRVGG 79 Query: 90 AV---MHPVAHTGVRKMVDKNALSL-----WMRERSDLWVQP-------KVDGVAVTLVY 134 V PV H VR NA+ L W+ + P K+DG ++ L Y Sbjct: 80 YVGEQFSPVRH-AVRMYSLDNAMGLDELDEWLARTLEAIGHPVQFCCELKIDGSSIALTY 138 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVP--------QTVSGPLANSTLQGEIFLQRE 186 G L KA +RG+G GED T + + +P + A+ ++GE+++ + Sbjct: 139 EAGVLTKAATRGDGTTGEDVTVNMRTVRDIPLRLRDDGMAGLRDSDASIEVRGEVYMPKS 198 Query: 187 --------GHIQQQMGGINARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQL----MS 233 + G N R AG + ++D T N L F++A D + + Sbjct: 199 SFEKLNAAAEATGKQGFANPRNAAAGSLRQKDPKITQNRDLATFLYAIADDAPIRAESQN 258 Query: 234 DRLKELATAGF------TLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEP 287 D L+ L GF L T ++VA R+ LP+ DGVVV+ Sbjct: 259 DLLEWLRDCGFHVNPDVKLCDTPQEVHDFCEQVAEKRDS-----LPYGIDGVVVKVNDFA 313 Query: 288 ESRH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 R + W +A+K+ P + + I VG++G + VA L PV++D V R Sbjct: 314 TQRDMGFTARAPRWAIAYKFPPEEKTTVMHDITVQVGRTGACTPVAELDPVLVDGSTVAR 373 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI-DDVVWRGAERTKP-----TPP------ 393 + ++ + D+ GD ++V AG IP I V+ E KP T P Sbjct: 374 ATLHNLDEVRRKDVRIGDTVIVRKAGDVIPEILGPVLSLRPEGAKPWEMPATCPSCGSPL 433 Query: 394 --ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 E + C S C Q + RL+ ++ + +DG+G+ L ++ R + + Sbjct: 434 VREEGEAAFRC--VSIDCPAQAMERLIHWASRGAMDIDGMGDEIVARLVESGRVLDVADY 491 Query: 452 LLLTPEQLQ-------NTPG----IAKSKSAQLWHQFNLARKQPFTRWVMAMGI----PL 496 LT L N G + + +A+L ++ + F R + +GI Sbjct: 492 YNLTEYDLATLETGRINKEGEPIHLGGTIAAKLMASLEASKSRTFARVLFGLGIRHVGKT 551 Query: 497 TRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 T A+ A+ S +L+ +TE+ Q+ G G+ A+ ++ + Sbjct: 552 TGEAIAAA-YPSMEKLMNATEEGLAQVDGIGAVIAKSIVTF 591 >UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL Length = 711 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 131/525 (24%), Positives = 218/525 (41%), Gaps = 54/525 (10%) Query: 23 PAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------G 76 P + +AQ+ +++L+ +I + D Y+ + + D YD L L + + + Sbjct: 4 PTATREQAQQRMAQLRGEISEHDYHYYVLDRPTISDAEYDALFRELQRLEAAYPDLVSSD 63 Query: 77 SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-RSDLWV-------QPKVD 126 S + V G AV+H + + + L + R R L V +PK+D Sbjct: 64 SPTQRVAGTAQEGFEAVVHDTPMLSLDNAFEADDLVDFDRRIRDRLGVASVVYTGEPKLD 123 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQ 184 G++++L Y+DG+L +A +RG+G GED T V + +VP + G L+ GE+ ++ Sbjct: 124 GISLSLTYQDGELVRAGTRGDGHTGEDVTANVRTLRSVPLRLRGDGYPGRLEVRGEVVIR 183 Query: 185 REGHIQQQMGGINA--------RAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLMSDR 235 +E + ++A R AG + + D T L +F + D L + Sbjct: 184 KEDFERLNQARLDAGERPFANPRNAAAGSLRQLDPRITARRPLTLFTFGVGDPLALGVES 243 Query: 236 ----LKELATAGFTLTQ--TYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPES 289 L+ LA GF T + V +A + R R + LPF DG V + + Sbjct: 244 HWQVLECLAGWGFRTTAPLEHLEGV-SACQAYRDRLIEERDALPFEIDGAVFKV-DDLAV 301 Query: 290 RHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 R L A W +A+K V+AI +VG++GKI+ +A L PV + V R Sbjct: 302 REQLGFTARAPRWALAFKLPAREATTVVEAIVPSVGRTGKITPLARLQPVEVSGVTVARA 361 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV----------WRGAERTKPTP---- 392 ++ + D+ GD ++V AG IP+I DVV WR ER + P Sbjct: 362 SLHNADELARMDVREGDTVMVRRAGDVIPQITDVVLAKRPEGAQPWRFEERVQACPECGS 421 Query: 393 PENRFNSLTCY--FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 R + C Q ++ +++ L +DG+GE L + Sbjct: 422 AVQRIEGEAAHRCVGGLYCPAQREGAILHFASRRALDIDGLGEKIVEQLVAKGLVVDLAD 481 Query: 451 WLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L QL + + L + AR R++ A+GIP Sbjct: 482 LFRLGHAQLAGLERMGDKSADNLLAALDRARSTTLARFLYALGIP 526 >UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=DNLJ_GEMAT Length = 689 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 146/592 (24%), Positives = 237/592 (40%), Gaps = 62/592 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR-----CFGSEPRD 81 P + E L++Q+ +Y+ + + D YD+L L + C P Sbjct: 9 PHQTVERARELREQLGTAQHEYYVLDRPTLSDQEYDRLFRELQGIEAEYPTLCTEDSPTR 68 Query: 82 VMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRE---------------RSDLWVQPKVD 126 + P+ A P H VR + NA L E S V+ K+D Sbjct: 69 RVGAPVQSA-FSPHRHL-VRMLSLDNAFDLSELEDFEQSLKRVVGDAIHTSGYTVELKID 126 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----PLANSTLQGEIF 182 G AV L YR+G L A +RG+G GED T V I VP + G PL ++GE++ Sbjct: 127 GAAVALTYREGVLVTAATRGDGTDGEDVTANVRTIRGVPLRLHGDNHPPLME--VRGEVY 184 Query: 183 L-----QREGHIQQQMGG---INARAKVAGLMMRQDDSDT-LNSLGVFVWA--WPDGPQL 231 L +R + G +N R AG M + D ++T L F +A PDG Sbjct: 185 LPFAGFERMNEARVAAGEPVYVNPRNAAAGSMRQLDSANTAARPLRFFGYAAVLPDGSAP 244 Query: 232 MSDR---LKELATAGFTLTQTYTRA--VKNADEVARVRNEWWKAELPFVTDGVVVRA--- 283 + L++L+ G + R ++ A+ A V +A L F DG VV+ Sbjct: 245 ARSQWELLEQLSAWGVPVAPHRQRCHTIQEAEAWATVVEHETRATLGFAIDGGVVKVNDM 304 Query: 284 AKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 A + E W VA K+ P + +++ I VG++G ++ A L PV + V Sbjct: 305 ALQDELGIRADRTPRWGVARKFAPDMALTKLRRIDVNVGRTGVLTPFAVLEPVDVGGATV 364 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK------------PT 391 ++ + + D+ GD + V AG IP + V + ++ T Sbjct: 365 TFASLHNADQIAAKDLREGDTVQVVRAGDVIPYVLGPVPEQRDGSQQPWSMPTQCPRCNT 424 Query: 392 PPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 P E + + Y + C + + LV +K L +DG+ A + L + Sbjct: 425 PVERYGDDVAVYCPNVACPGRQLEGLVHFSSKDALDIDGLSYARIQQLLDAGLVHDVADL 484 Query: 452 LLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERS 508 +T +QL + AK + L A++QP +R + +GI A L + S Sbjct: 485 FDITVDQLTSLERFAKKSAENLVAAIAAAKQQPLSRLMFGLGIRHVGAQAAQLLSRQYGS 544 Query: 509 WSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 L+ +T + + G GS A+ V + + + L L A+ + EP Sbjct: 545 LDALMNATAEQLGAVRGIGSIIAQSVASYFADPTTRALMERLRARGLRFDEP 596 >UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEU9_MYCFE Length = 664 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 115/525 (21%), Positives = 235/525 (44%), Gaps = 67/525 (12%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR-----CFGSE 78 A + +++I L ++ QW+ +Y+++ V D YD+ L Q ++ + + Sbjct: 4 AMNALDIKKKIIELSNKLNQWNKEYYQDNNPSVSDFEYDKALQELEQLEKKYPQFIYVNS 63 Query: 79 PRDVMMPPLNGA---VMHPVAHTGVRKMVDKNALSLWMR--------ERSDLWVQPKVDG 127 P + + V+H + K D + + ++ E + ++PK+DG Sbjct: 64 PTQKLGSFADNKFKKVVHQKPMLSLSKAYDYSEIEKYVNNIEKLVPIEDINFSIEPKIDG 123 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL---- 183 ++++L Y G LN+A++RG+G +GED T+ + I+++P+ ++ A ++GE+FL Sbjct: 124 LSISLHYNHGFLNQALTRGDGHEGEDVTENIYQIASIPKIINYD-AELEVRGEVFLPKAE 182 Query: 184 -QREGHIQQQMGG---INARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQLMSDRLKE 238 QR + G N R +G + + D + N L F++ + PQ + +E Sbjct: 183 FQRLNENLIKAGEKPFSNPRNAASGTLRQLDPTIVKNRQLASFLYELVE-PQKHNITTQE 241 Query: 239 LATAGFTL----TQTYTRAVKNADEVARVR-NEWWKAELPFVTDGVVV------------ 281 A F T Y + V+ + + K +L + DG+V+ Sbjct: 242 QALEFFQKLNIPTNPYHKVVEVEELEEAISFFAEMKNKLNYDADGLVIKLNNLTYWNKMG 301 Query: 282 RAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + AK P+ +A+KY+ ++ +K I+ VG++GKI+ VASL PV L+ Sbjct: 302 KTAKFPKHS----------IAFKYEVETAISTIKDIKTTVGRTGKITYVASLEPVELNQT 351 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE----RTKPTPPENRF 397 V+ + + ++ +I DQ+ + AG+ IP++ +V + ++ +T P Sbjct: 352 IVRAATLHNYNFIEDLNININDQVQIVKAGEIIPKVLALVKKQSKGVFGKTLECPSCGSV 411 Query: 398 -----NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH---RFEHIF 449 +++ + + C E I+ + +++ L + G+G + ++ + E IF Sbjct: 412 LVEIEDNVDQFCVNKNCPEMTINAIYHFASRKSLNIVGLGLITVKDFYKHNLVKSIEDIF 471 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + L ++L A+ K L A+ F++ + A+GI Sbjct: 472 N-LHKHKDELLKLERYAELKVNNLLTNIGKAKDSTFSKVLFALGI 515 >UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetaceae RepID=D2R1J9_9PLAN Length = 676 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 127/520 (24%), Positives = 228/520 (43%), Gaps = 68/520 (13%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-------------GSE 78 E + L++ I++ D Y+ + E+ D YD+L LT + F G E Sbjct: 10 ERLQALREAIRRHDYLYYVRAQPEISDLEYDRLMQDLTTIEASFPELVTPDSPTQRVGEE 69 Query: 79 PRDVMMPPLNGAVMHPVAHT----GVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVY 134 P + ++ + A M + ++ ++K ++ + SL E + V+ KVDGVA+++ Y Sbjct: 70 PMEGLVQVAHRAPMLSIENSYTVEDLQKFAERTSKSLD-GEAVEWVVELKVDGVAISVRY 128 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREGHI--- 189 +G L +A++RGNG G+D T V I+ VP + G + L+ GE+++ + Sbjct: 129 ENGLLVQALTRGNGEVGDDVTHNVRTIADVPLRLYGDKIPAVLEVRGEVYMTNSDLVLLN 188 Query: 190 --QQQMGG---INARAKVAGLMMRQDD----SDTLNSL--GVFVWAWPDGPQLMSDRLKE 238 QQ++G N R +G + D L L GV V M L++ Sbjct: 189 KRQQELGKELYANTRNVASGTIRLLDPKLCAERKLRMLVHGVGVCEGMTAENHMQ-FLEQ 247 Query: 239 LATAGFTLT------QTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHW 292 +++ G T T++ AVK +E+ +E L F DG+V++ + + R Sbjct: 248 VSSLGLPPTPHCKCFATFSEAVKYCEEIPERLHE-----LDFEVDGLVLKVNR-FDQRAK 301 Query: 293 LPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 L +++ W++A+K++ ++ I VGK+G I+ VA L PV L V R ++ Sbjct: 302 LGQRSKSPRWVIAYKFEKYEATTKLLGISVQVGKTGAITPVAELEPVQLAGTTVSRASLH 361 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDV- 408 + DI GD ++V AG+ IP I V AERT P +F + SDV Sbjct: 362 NADEIVRKDIRIGDIVVVEKAGKIIPHI--VRVEAAERTTDLPV-FQFPTHCPVCGSDVA 418 Query: 409 --------------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 C Q +L + + + ++G+G+ L + L Sbjct: 419 KDEGGVYIRCTNPSCPAQLREKLRFFATRGAMDIEGLGDKLVDQLVASKLVTCYGDLYRL 478 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 T ++L + + + + +L ++ +P +R + + I Sbjct: 479 TLDKLTSLERMGEKSATKLLEGIVASKSRPLSRLLNGLSI 518 >UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_LACLM Length = 686 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 131/608 (21%), Positives = 246/608 (40%), Gaps = 110/608 (18%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP---- 86 + +I L Q+ Q+ +Y+ + VED YD L L + ++ P+ V Sbjct: 4 ESKIKELTDQLNQFAYEYYTLDEPSVEDSEYDHLYHELVKLEQ---ENPQLVRADSPTHR 60 Query: 87 -----LNGAVM--HPVAHTGVRKMVDKNALSLWMRERSDLWVQP------KVDGVAVTLV 133 L+G V HP + + + L+LW V P K+DG++++L Sbjct: 61 TGGVILDGFVKFRHPYNLYSLGDVFSREELALWEERVRKEIVNPEYICELKIDGLSLSLY 120 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG----HI 189 Y +G L A +RG+G GE+ T+ V I VP + + + ++GE +L R+ + Sbjct: 121 YENGLLVTAATRGDGTTGENITENVKRIKDVPLKLKEAI-DIVVRGEAYLPRQNFAKLNA 179 Query: 190 QQQMGGI----NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDR----LKELAT 241 ++++ G N R AG +RQ D+ + G+ + + + +D L+ Sbjct: 180 ERELEGAAPFANPRNAAAG-TLRQLDTKIVAKRGLATFLYQEASPATNDTQEEVLEYFEE 238 Query: 242 AGFTLTQTYTRAVKNADEV-------ARVRNEWWKAELPFVTDGVVVRAAK--EPESRHW 292 GF + A +N DE+ R+R+E LP+ DGVV++ E E + Sbjct: 239 LGFQVNPERKFA-RNLDEIWEFIEEATRLRDE-----LPYDIDGVVIKVNNLAEQEELGF 292 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W +A+K+ E+ ++ + VG++G ++ A++ V+L V R + +V Sbjct: 293 TVKAPRWAIAYKFPAEQAETEILSVDWTVGRTGVVTPTANMTAVLLAQTTVARATLHNVD 352 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAERTKPTPPENRF------------ 397 QE DI D++++ AG IP++ V+ + A + T N++ Sbjct: 353 YIQEKDIRNHDKVMIYKAGDIIPKVGKVLLEKRKPARHLRKTHRANKYVWTRFGRRSVEK 412 Query: 398 ---------------------NSLTCYFASDV--------CQEQFISRLVWLGAKQVLGL 428 +S +F +V C Q +L+ ++ + + Sbjct: 413 GLVFSKREDNRVKIPTQCPECDSDLIHFEDEVALRCVNPLCPAQIREKLIHFASRDAMNI 472 Query: 429 DGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRW 488 G+G + L + LT E L + ++ + ++ +R+ + Sbjct: 473 VGLGPSVISQLFDKKLVTDVADLYQLTVEDLLTLDKVKETLAQKIVSAIAQSRENSAEKL 532 Query: 489 VMAMGIP----------LTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWK 538 + +GI L R A + R+ SQ ++E+ ++P G A V+ + Sbjct: 533 LFGLGIRHVGGKAAKLLLERFA----NLRALSQ---ASEEEISEIPSLGGVIATAVVSYF 585 Query: 539 ENAQIKKL 546 E A K L Sbjct: 586 ETAGAKTL 593 >UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=DNLJ_NAUPA Length = 656 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 97/416 (23%), Positives = 186/416 (44%), Gaps = 46/416 (11%) Query: 114 RERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLA 173 E +++PK DG ++ L+Y +GKL +A +RG+G GED T I+++P + + Sbjct: 104 HENFSFYIEPKFDGASLNLIYENGKLIRAETRGDGEIGEDVTLNAKTINSIPLEIKEK-S 162 Query: 174 NSTLQGEIFLQREGHIQQQMGGI--------NARAKVAGLMMRQDDSDTLNSLGVFVWAW 225 ++GE+ ++++ + + N R AG +RQ D + + W Sbjct: 163 LIEIRGEVVIKKDDFDKLNEERLKNGEPTFANPRNAAAG-SLRQLDPKITAKRPLIFYPW 221 Query: 226 PDGPQ-LMSDRLKELATAGFTL--TQTYTRAV--------KNADEVARVRNEWWKAELPF 274 G L +R EL ++L + R V K DE ++R+ + Sbjct: 222 GVGVNSLNYERYSELMDYIYSLGFKEPPKRGVCKDIPCVEKKYDEFVKLRDSF-----EV 276 Query: 275 VTDGVVVRAAKEPESRHWLPGQAE----WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVV 330 + DG+VV+ + H + G + W+VA+K+ + + ++ + VG++G ++ V Sbjct: 277 MLDGMVVKI--DEIKYHDILGYTQKYPRWMVAYKFPAIEKETIIEDVIVQVGRTGVLTPV 334 Query: 331 ASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAER 387 A L PV + V+R + + + DI GD ++V +G IP+I V+ +G E+ Sbjct: 335 AVLKPVEIGGVIVERATLHNFDEIERMDIRIGDHVIVIRSGDVIPKITKVLTWKRKGDEK 394 Query: 388 TKPTPPE---------NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRA 438 P P + + C S C + ++ +++ +K L ++G+GE+ + Sbjct: 395 PIPRPTHCPVCGAEVLDEGALIKCQNLS--CPARVVNTIIYFASKNCLDIEGLGESVAKL 452 Query: 439 LHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 L++ + + L E L+ P A+ K+ L + R+V A+GI Sbjct: 453 LYEHGLVKDVTDLFELKVEDLEKLPLFARKKAENLVNAIKSKVGVECWRFVNALGI 508 >UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacteraceae RepID=D2QGP9_9SPHI Length = 696 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 102/411 (24%), Positives = 187/411 (45%), Gaps = 53/411 (12%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP--LN 88 +E+I L ++ Q++ Y++ SEV+D +D+L A LT + + E R P + Sbjct: 4 EEQIIDLTNRLNQYNFQYYQNSISEVDDFTFDKLLADLTALENQY-PEFRQPDSPTARVG 62 Query: 89 GAV------------MHPVAHTGVRKMV---DKNALSLWMRERSDLWVQPKVDGVAVTLV 133 G + M + +T + + DK + + + K DGVA++L Sbjct: 63 GTISKEFKTVYHRFPMLSLGNTYSEEDLIEFDKRVQKGLNGQTYEYICELKFDGVALSLT 122 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV-SGPLANST---------------- 176 Y +G L + +RG+G++G+D T + I VP + +G A T Sbjct: 123 YENGVLVQGATRGDGVRGDDITNNIRTIRTVPLRIGAGHKATHTQPESAPAVAALPALFE 182 Query: 177 LQGEIFL-----QREGHIQQQMGG---INARAKVAGLMMRQDDSDTLNS-LGVFVWAW-- 225 ++GE FL R ++ +G N R +G +QD L +++++ Sbjct: 183 VRGEGFLPLAEFDRINKEREDIGEPLLANPRNAASGTFKQQDSGAVAKRRLDCYLYSFLS 242 Query: 226 -PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVR 282 D Q + L + GF ++ T+ R + EV NEW + +LP TDG+V++ Sbjct: 243 DTDIFQTHEESLVAMNAWGFNVSPTW-RKCTDIQEVMAYINEWETKRFDLPLGTDGIVIK 301 Query: 283 AAKEPESRH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 + + R + W +A+KY+ +A E+ IQ+ VG++G ++ VA L PV+L Sbjct: 302 VNRYDQQRDLGYTAKSPRWAIAFKYKAMAASTELNGIQYQVGRTGAVTPVALLTPVLLAG 361 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKP 390 V+R ++ + + + D + V G+ IP+I V + R ++++P Sbjct: 362 TIVKRASLHNANEIERLGVMMHDTVFVEKGGEIIPKITGVDLNRRTDKSQP 412 >UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 Length = 663 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 118/528 (22%), Positives = 225/528 (42%), Gaps = 83/528 (15%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQW--------------QRCFG 76 ++ I L++ I+ +D Y+ + E+ D YD+L L Q+ G Sbjct: 4 KKRIDELRKIIEYHNDKYYNQDDPEITDYEYDKLYVELRNLENSHPEYKIQSSPTQKVGG 63 Query: 77 SEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGVAV 130 + R++ V H + ++ + K + ++ + + V+ K+DG+ V Sbjct: 64 TVKRELR------KVKHDIPVVSLQDVFSKEEVYSFVEKITSEVTYPKFVVEKKIDGLTV 117 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI- 189 L Y +G+L +AI+RG+G GE + + + ++P+ + L ++GEI++ E I Sbjct: 118 VLRYYNGELKEAITRGDGSIGESVFENILQVKSIPKHIPSKLNYLEIRGEIYMTNENFIK 177 Query: 190 ----QQQMGG---INARAKVAGLMMRQDDSDTLN--SLGVFVWAW--PDGPQL--MSDRL 236 Q+++GG N R AG +RQ D+ + +L +F++ +G + S+ L Sbjct: 178 VNEKQEEIGGKIFKNPRNLAAG-TIRQLDTSIVKDRNLDIFIFNLEISEGKKFETHSETL 236 Query: 237 KELATAGFTLTQTYTRAVKNADEV--ARVRNEWWKAELPFVTDGVVVRAAKEPE--SRHW 292 + L+ GF ++ + + + ADEV A + E + +L + DG VV+ + S Sbjct: 237 EWLSNQGFDVSPNF-KICETADEVWNAILDIEESRWDLGYSIDGAVVKVDNLNDRISLGM 295 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 +W VA+KY P + ++ I V ++G+++ +A L PV+L + + + + + Sbjct: 296 TSKVPKWTVAFKYPPEQKETVIEDIIVQVSRTGRLNPLALLRPVILANTTISKATLHNQD 355 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDV---- 408 DI GD +++ AG IP I + PE R + Y DV Sbjct: 356 FIDSKDIRIGDTVIIQKAGDIIPEIIRSI-----------PEKRPDWAKKYIIPDVCPVC 404 Query: 409 -------------------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 C+ Q ++ + +K + + G G+ AL + + I Sbjct: 405 NSKTIREPDGVDTRCSNPDCEAQSFRKIGYFVSKDAMNIVGFGQNTVEALMKDGYIKKIS 464 Query: 450 SWLLLT--PEQLQNTPGIAKSKSA-QLWHQFNLARKQPFTRWVMAMGI 494 +L + L I K KS L + L++ R + +GI Sbjct: 465 DIYILKNYKDALIEKGIIGKEKSVNNLLNAIELSKDNDIDRLITGLGI 512 >UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C45C0 Length = 678 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 128/532 (24%), Positives = 217/532 (40%), Gaps = 59/532 (11%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEP 79 +P E + L++Q+ + Y+ E + D +D L L +R S Sbjct: 5 APTPPAERAAELRKQLDHHNYLYYVEAAPVISDREFDTLLKELADIERANPGLVTPDSPT 64 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKVDGV 128 + V P+ G V H + D+ L + + D + K+DGV Sbjct: 65 QRVGGQPIPGFKQVTHKTPMLSIDNSYDEGDLRKFDADVRKAVGPGAAVDYVTELKIDGV 124 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFLQR- 185 +++L Y +G L A +RG+G G+D T + I+A+P + S P A ++GE+++ R Sbjct: 125 SMSLTYENGVLAFAATRGSGTVGDDVTHNIKTIAAIPLKLKTSNPPAIFEVRGEVYMTRG 184 Query: 186 ---EGHIQQQMGG----INARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQL------ 231 + +Q G NAR AG + +D + L F + D L Sbjct: 185 ELARINAEQAKGNQEPYKNARNLTAGTLKLKDPRECATRKLAFFAYGSGDIGGLAITTQA 244 Query: 232 -MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--E 286 M +LKE GF + + R + DEV EW + EL + TDG+VV+ + Sbjct: 245 AMLAKLKEF---GFPV-NPHERVCGSIDEVIAYCQEWEPKRKELAYDTDGIVVKVNDWAQ 300 Query: 287 PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL-APVMLDDKKVQR 345 E + +W A+K++ ++ + F +GK G+++ VA+ PV L V Sbjct: 301 RERIGYTAKVPKWAKAYKFEAEQATTKLGKVVFYLGKFGELTPVATFDPPVQLAGTTVTH 360 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV---WRGAERT--------KPTPPE 394 ++ + E D+ GD ++V G+ IP++ DV+ GAE+ K P Sbjct: 361 ASMHNASWVAERDVRIGDTVVVEKKGEIIPQVVDVIKADRTGAEQVITWPDKCPKCGGPV 420 Query: 395 NRFNSLTCY----FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 + S T Y + VC Q RL K + +DG+G L T + + Sbjct: 421 EKEESATSYNFICANTGVCPAQLAKRLEGFAKKTRMEIDGLGREVAVQLVDTELVKSVAD 480 Query: 451 WLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALN 502 LT QL G K+ L ++ + R + + I + A++ Sbjct: 481 LYRLTKAQLLALEGFKDKKAQNLLDGIAASKGRGLARLLPGLTIYMVGEAMS 532 >UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR65_9FIRM Length = 669 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 95/400 (23%), Positives = 181/400 (45%), Gaps = 30/400 (7%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DG+++ L+Y +G L + ++RG+G GED T V I +P + A ++GE+++ Sbjct: 116 KIDGLSMNLIYENGSLMQGLTRGDGKVGEDVTSNVKTIKTIPLYIENAPAYMEVRGEVYM 175 Query: 184 QREGHI----QQQMGGI----NARAKVAGLMMRQDDSDTL-NSLGVFVWAW--PDGPQLM 232 R+ I ++ G+ N R AG + + D T +L F +A +G + Sbjct: 176 PRKSFIALNEERDEAGMMPFANCRNAAAGSLRQLDPKVTAARNLDFFAYALGAEEGLDIS 235 Query: 233 S--DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA--ELPFVTDGVVVRAA--KE 286 S D L +L F + Y + + VR EW K EL + TDG+V++ ++ Sbjct: 236 SQDDLLLQLKKFHFRVNPHYRKWDSIEGVITGVR-EWEKKRRELDYDTDGMVIKVNDFRQ 294 Query: 287 PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 E +W +A+KY P V +++ I ++G++G ++ A L PV L V+R Sbjct: 295 QELLGATGKDPKWAIAYKYPPEEAVTKIEKIVVSMGRTGVLTPSADLTPVRLAGTTVKRA 354 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPEN--------- 395 + ++ +E DI GD +++ AG+ IP I V+ R + PEN Sbjct: 355 TLHNLDFIREKDIREGDTVIIYKAGEIIPEIAAVLKEKRNGSEKEFEMPENCPVCGNSIR 414 Query: 396 RFNSLTCYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 R ++ + + C +L+ ++ + ++G+G A +L + L Sbjct: 415 RIDTEAAFRCINPACGGVVREKLIHFASRDAMDIEGLGPAVVDSLLAYRLVADAADFYAL 474 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + L+ + + +A L ++++ + + +GI Sbjct: 475 KEDDLRQIERMGEKSAANLITAIRASKERGLAKLLFGLGI 514 >UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria (class) RepID=C6WRP3_ACTMD Length = 674 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 127/512 (24%), Positives = 211/512 (41%), Gaps = 57/512 (11%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP-PLN 88 A+E I L ++ D Y++ G V D YD A + + + P P PL+ Sbjct: 11 AEERIRDLADRVVSLRDAYYR-GSPLVADAEYD---ATEDELRSLIAANPELTPDPNPLD 66 Query: 89 ----GAVMH-PVAHT----GVRKMVDKNALSLWMRE--RSDLWVQPKVDGVAVTLVYRDG 137 AV+H PV H + K ++ ++ + V PK+DG++++LVY G Sbjct: 67 QVGAPAVLHAPVRHARPMLSLEKATQPEQVAAFLDRFPGQPVVVMPKLDGLSLSLVYEGG 126 Query: 138 KLNKAISRGNGLKGEDWTQKV-SLISAVPQTVSGPLANSTLQGEIFLQR-------EGHI 189 L +A++RG+G G+D T V +L VP V P ++GE + R E H Sbjct: 127 ALLRAVTRGDGTTGDDVTPLVRALADGVPTRVPAP-GRVEVRGEAVMLRSTFTAYNEAHP 185 Query: 190 QQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPD-----GPQLMSDRLKELATAGF 244 + + IN R AG + +D + F+ D G + +D + L GF Sbjct: 186 DKPL--INPRNAAAGTLRAKDPATVAGRRLRFLAFELDTDAEAGAGVGADLEEGLRALGF 243 Query: 245 TLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKE-----PESRHWLPGQA 297 T R +A+ RV E +A+L + DG V+R A +R P A Sbjct: 244 TPAD--MRHAADAEAAQRVITGIETGRADLDYDLDGAVLRLADRRAYAAAGTRSNSPRGA 301 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 +A+K+ + + + + VGK+GK+ VA L PV + V R + + + Sbjct: 302 ---LAFKFAAEEKTTLLVDVVWDVGKTGKVVPVAHLEPVFVGGTTVTRATLANQEVIKAR 358 Query: 358 DIAPGDQILVSLAGQGIPRID---DVVWRGAERTKPTPPEN----------RFNSLTCYF 404 + GD +LV AG IP + D R E + PP + NS + Sbjct: 359 GVMVGDTVLVRRAGDVIPFVAGVLDAAKRTGEEREIVPPSTCPSCDQPLTEQGNSRELFC 418 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 + C Q + RL+ ++ +D IG + EH + LLT EQL Sbjct: 419 TNVSCAAQTVRRLIHWASRAAADIDAIGPVWIERFAEAGLLEHPSDFYLLTKEQLLEFER 478 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 + ++ + ++ +R R ++ +P+ Sbjct: 479 VGETSATRMIESIAASRAVGLRRALIGFAVPM 510 >UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT Length = 668 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 119/544 (21%), Positives = 228/544 (41%), Gaps = 57/544 (10%) Query: 41 IKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVM-MPP---LNGAV---MH 93 + W Y+ + + D YD+L ++ +++ P + P + GA+ Sbjct: 13 LNAWARAYYTDDRPIASDEEYDELYSQAEKFEE---QNPELALSYSPTRRIGGAISEGFS 69 Query: 94 PVAHTG----VRKMVDKNALSLWM----RERSDLWVQPKVDGVAVTLVYRDGKLNKAISR 145 +AH + + D L W+ + + +V+PK DG ++ L Y G L A +R Sbjct: 70 KLAHGAQMWSMEDIFDDADLLAWLARGEKSGAQFYVEPKFDGASLNLTYEGGVLISAATR 129 Query: 146 GNGLKGEDWTQKVSLISAVPQTVSGPLANST-LQGEIFLQREG----HIQQQMGG----I 196 G+GL GED TQ I +VP + P A ++GE + + + ++ G Sbjct: 130 GDGLIGEDVTQNARAIKSVPLQI--PYAGRIEIRGETLIAKSDFDALNDERAANGESLFS 187 Query: 197 NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQ-----LMSDRLKELATAGFTLTQTYT 251 N R AG +RQ DS + + W G L S ++ + + GF L + Sbjct: 188 NPRNAAAG-SLRQLDSAIVAKRKLKFIPWGVGEHSLSFALHSQIMEFVRSLGF-LRDEFC 245 Query: 252 RAVKNADEV--ARVRNEWWKAELPFVTDGVVVRAAKEPESRH--WLPGQAEWLVAWKYQP 307 R K+A E+ A +A + DG+V+R + + + ++VA+K+ Sbjct: 246 RICKSASEIRAAYEALHSMRASKDLMLDGMVIRVNELSKCAQMGYTVKFPRFMVAYKFPA 305 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 V +V ++ I VG++G ++ VA + V +D V + + + D + + Sbjct: 306 VEKVTRLREINLQVGRTGAVTPVAVVYSVNIDGANVSNATLHNFDEIARLGLMKNDFVGI 365 Query: 368 SLAGQGIPRIDDVVWRGAERTK---------PTPPENRFNSLTCYFASDV-CQEQFISRL 417 +G IP+I V + + T+ P E + ++ C+ + I L Sbjct: 366 IRSGDVIPKITSVYKQRRDGTQSEISRPDRCPVCGEKLLDEGALIKCQNLDCKARVIGSL 425 Query: 418 VWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQF 477 ++ +K+ + ++G+ +A L ++ + I L + L + G A K + L Sbjct: 426 IYFCSKKCMNIEGLSDATITQLFESGKISKIGDIYALGAQDLADLEGFADKKISNLLGAI 485 Query: 478 NLARKQPFTRWVMAMGI----PLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQ 533 N ++ P R++ ++GI + + A+ + W L ++E +L G G AR Sbjct: 486 NASKNAPLERFIASLGIEHIGEVAARKIAAAFGQDW---LDASEDEILRLEGFGEAMARS 542 Query: 534 VIEW 537 + E+ Sbjct: 543 LAEF 546 >UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ_DESOH Length = 682 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 121/523 (23%), Positives = 209/523 (39%), Gaps = 62/523 (11%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRD 81 + A+E ++ L+ ++ + + Y+ + E+ D YD+L L + + S Sbjct: 8 SEAKERVTFLRNELHRHNHLYYIKDAPEISDAEYDRLFRELAELEALHPDLADPASPTAR 67 Query: 82 VMMPPLNG-----------AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAV 130 V PP ++ + A + K ++ SL + +PK+DG AV Sbjct: 68 VGAPPTGDLATVTRTIPMLSISNAFADEELFKFDERVRRSLQTGDPVTYLAEPKLDGTAV 127 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG---PLANS-TLQGEIFLQRE 186 LVY G+L A +RG+G+ GE T I +VP ++G P+ N ++GE+ + +E Sbjct: 128 ELVYEKGRLVMAATRGDGVTGEVITPNARTIGSVPLHLTGDAVPMPNLLEVRGEVVMTKE 187 Query: 187 GHIQQQMGGI----------NARAKVAGLMMRQDDSD-------TLNSLGVFVWAWPDGP 229 G +++ + NAR AG +RQ DS TL + G+ ++ D Sbjct: 188 GF--EKLNALRLERDEPLFANARNAAAG-SLRQLDSRVTASRPLTLIAYGIGRFSEIDAI 244 Query: 230 QLMSDRLKELATAGFTLTQTYTR---AVKNADEVARVRNEWWKAELPFVTDGVVVRAAKE 286 + + LA GF T ++ R +K + R E + LP+ DG+VV+ + Sbjct: 245 STQHEIVTRLADFGFK-TNSHVRWDLDIKGVIDFYRFL-EGIRPSLPYDIDGMVVKVDRL 302 Query: 287 PESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 R W++A+K+ + + AI VG++G ++ VA L PV + V Sbjct: 303 DFQRTLGATSRSPRWVIAYKFAASQETTRLVAIDVQVGRTGALTPVALLEPVTIGGVTVS 362 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-- 402 R + + DI GD +LV AG IP + V+ G TP + C Sbjct: 363 RATLHNEDEIARKDIRVGDAVLVQRAGDVIPEVVQVIT-GRRTGNETPFQMPATCPVCGT 421 Query: 403 -----------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 + C Q R+ AK +DG+G+ L Sbjct: 422 PVVREPSEAVTRCVNAACPAQVKERIKHFAAKGAFDIDGLGDKLVDQLVDRGMIASYADL 481 Query: 452 LLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 L E L++ + + L +R F ++ +G+ Sbjct: 482 FTLRVEDLESLDRMGFKSAQNLVAAIEKSRHITFDAFLYGLGM 524 >UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW Length = 663 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 130/582 (22%), Positives = 244/582 (41%), Gaps = 65/582 (11%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN- 88 A++ I +L + I + Y+ + E+ED YD+L L +R F +D P N Sbjct: 6 AKQRIEQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKD--DSPTNK 63 Query: 89 --GAVM-------HPVAHTGVRK-MVDKNALSLWMRERSDL-------WVQPKVDGVAVT 131 G ++ HP+A + M ++ L R + +L V+ K DG+A+ Sbjct: 64 VGGTILEKFEKFEHPIAMYSLSNVMNEEEFLEFDNRMQKELNQSKIKYTVENKFDGLALE 123 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIF--------L 183 L+Y GKL A +RG+G GE+ T V ++S VP+++ ++GE L Sbjct: 124 LIYEKGKLTVASTRGDGQVGENVTNNVKMMSNVPKSIKEK-KKLIVRGEALITKKDFEAL 182 Query: 184 QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQL-MSDRLKE--- 238 +E +++ NAR +G + + D +++ L F + + +++ K Sbjct: 183 NKEREELEEIPFANARNAASGGLRQLDSAESKKRRLKFFAYQIANYKDFDLTNEYKSMEF 242 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEWW-----KAELPFVTDGVVVRA--AKEPESRH 291 L+ GFT+ + N D +V ++ ++++ + DG+V++ K E Sbjct: 243 LSELGFTVEGVHP----NID-AKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKHQEKLG 297 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 +L + VA+K++P + +K I+ VG++G ++ VA L PV + V V + + Sbjct: 298 FLSRAPRFAVAFKFKPEEKETVLKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHNP 357 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP-ENRFNSLTCYFASDVCQ 410 + DI GD ++V +G IP+I VV +RT + P E C + V Sbjct: 358 NEIKSKDIRIGDTVVVIRSGDVIPKITRVVLE--KRTADSKPFEFPKKCPVCGGDTAVTD 415 Query: 411 EQFISRLV-------------WLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 I R + + +K + ++ IG+ ++ + +T + Sbjct: 416 GDVIVRCINEECPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRD 475 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL---TRAALNASDERSWSQLLF 514 L + + + + ++ R++ A+GI T A L A S Sbjct: 476 DLFKFERMGEKLAGYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIENFKK 535 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 +T Q + G G A+ + ++ N + KL L A + Sbjct: 536 ATIDDLQNIEGIGEISAKSIYDFLHNEKTLKLIDDLLASGVN 577 >UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DNLJ_DESAH Length = 685 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 135/581 (23%), Positives = 241/581 (41%), Gaps = 66/581 (11%) Query: 21 VCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF----- 75 + P+ S R ++E L++Q+ + +Y + + DG YD++ RL + F Sbjct: 2 IDPSSSFDRIKKEARLLREQLHVHNINYHVKDDPVISDGEYDRMMQRLIAIETQFPELST 61 Query: 76 -GSEPRDVMMPPLNG--AVMHPVAHTGV------RKMVDKNALSLWMRERSDL--WVQPK 124 S R + L H + + + ++D + + + SD+ V+PK Sbjct: 62 PDSPTRRIGAKALTAFETAEHAIPMQSLDNAFSDQDVIDFHNRTAKILNTSDIRYTVEPK 121 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL------Q 178 +DGVAV L Y G L A++RG+G GE T I +VP ++ P N T+ + Sbjct: 122 LDGVAVELRYEQGSLTLALTRGDGTMGEVITDNARTIPSVPLKLA-PAGNGTIPDVLEVR 180 Query: 179 GEIFLQR---EGHIQQQMGG-----INARAKVAGLMMRQDDSDTL--NSLGVFVWAWPDG 228 GE+ + EG ++++ N R AG +RQ DS L +FV+ Sbjct: 181 GEVIINSKDFEGLNKKRLATGEPLFANPRNAAAG-SLRQLDSRVTAKRPLEIFVYGVGRA 239 Query: 229 PQLMSD--------RLKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGV 279 +LM++ L+ L GF + + + + R + E + +L + DG+ Sbjct: 240 QELMANFDIGSHSALLESLKRLGFRINPLIRSGLSLTEVLDRFKAFETMRQDLDYEIDGM 299 Query: 280 VVRAAKEPESRHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPV 336 V++ + + L +A W +A+K+ + + + I VG++G ++ VA L PV Sbjct: 300 VIKV-DDIVFQERLGTKARSPRWAIAYKFPAMEETTVINDIIVQVGRTGTLTPVAILEPV 358 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAERTKPTP- 392 + V R ++ + Q DI D +LV AG IP++ V G+ER P Sbjct: 359 NIGGVMVARASLHNQDEIQNKDIRINDTVLVKRAGDVIPKVVKPVTALRTGSERVFVMPT 418 Query: 393 -------PENRFN---SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 P R + ++ C AS C+ Q RL +K ++G+G L Sbjct: 419 HCPVCHSPVRRLDNEAAVKCINAS--CKAQLKQRLKHFVSKGGFDMEGLGTKLIDQLVDR 476 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RA 499 L E L + + + + +++ P R++ A+G+ T A Sbjct: 477 TLVGSFADLFTLDRETLAAMDRMGEKSATNIVQAIERSKRIPLKRFLFALGMAHTGESAA 536 Query: 500 ALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN 540 L +S + LL ++ + + G G A V+ + N Sbjct: 537 QLLSSTFFTLEALLKASAEALGAIEGVGPKTADSVVAFFAN 577 >UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 Length = 841 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 104/401 (25%), Positives = 169/401 (42%), Gaps = 51/401 (12%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARL--------------TQWQRCF 75 A + I RL + ++ +Y+ V D YD+L L + QR Sbjct: 26 AAQHICRLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRV- 84 Query: 76 GSEP--------RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD-----LWVQ 122 G EP +V M L A P GV + A +R+ D ++ Sbjct: 85 GGEPLAGFAEVRHEVPMLSLTNA-FSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVIE 143 Query: 123 PKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GE 180 PK DG+A++L+YRDG L +A +RG+G GED TQ + +S +P + G ++ GE Sbjct: 144 PKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGE 203 Query: 181 IFLQREGHI----QQQMGG----INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQ-- 230 + + + + +Q G N R AG +RQ DS + + + Q Sbjct: 204 VLMLKADFVALNKRQAENGQKPFANPRNAAAG-SLRQLDSRITAQRKLHFFPYSVARQQD 262 Query: 231 --LMSDRLKELA---TAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRA 283 + + ++ELA GF+L KN DEV + ELP+ DG+VV+ Sbjct: 263 GFVAEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAFYEHMQQKRPELPYEIDGMVVKV 322 Query: 284 AKEPESRH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + ++ W VA K+ + V+AI +G++G ++ VA L PV + Sbjct: 323 NSLAQQHELGFISRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGV 382 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW 382 V + + D+ GD ++V AG IP + V++ Sbjct: 383 TVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIF 423 >UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT Length = 684 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 117/514 (22%), Positives = 231/514 (44%), Gaps = 55/514 (10%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR--DVMMPPL- 87 +E+I L+ ++++ + +Y+ + D +D+ +L Q + + P D P + Sbjct: 4 KEQIQSLRDELREHNYNYYVNDNPTISDFEFDK---KLEQLKTLEAAHPEFYDATSPSVR 60 Query: 88 -NGAV---MHPVAHTGVRKMVDKNALSLW--------MRERSDLWVQP----KVDGVAVT 131 G V + + H +D N+ S+ +++ D +Q K DG +++ Sbjct: 61 VGGEVTKNFNTIKHINRMYSLD-NSYSIEDLRDWEKRIKKIVDGEIQYTCELKYDGASIS 119 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREG-- 187 L Y +GK +A++RG+G +G++ T V I +VP + G A ++GEI L +G Sbjct: 120 LHYENGKFVQAVTRGDGNQGDEVTANVRTIKSVPLQLKGDDVPAKFEIRGEIVLPWDGFH 179 Query: 188 --HIQQQMGGI----NARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLMSDRLKELA 240 + ++ G+ N R +G + QD ++ L ++ + + L Sbjct: 180 KMNEERADQGLDLYRNPRNTASGSLKLQDSAEVAKRPLDCLLYQLAGENLPVKSQFDSLT 239 Query: 241 TA---GFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVR--AAKEPESRHWL 293 A GF Q ++ V + +EV N W + ELP+ TDGVV++ + + + + Sbjct: 240 LARKWGFKAPQE-SKLVHSIEEVFEFINHWDVARKELPYETDGVVIKVNSLDQQDELGFT 298 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 +W +A+K+ ++ I + VG++G I+ VA+L PV + V+R ++ + + Sbjct: 299 AKAPKWAMAYKFAAEQVSTRLEEITYQVGRTGSITPVANLEPVEISGTTVRRASLHNADQ 358 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKPT-----PPENRFNSLTC----- 402 ++ DI GD++ V G+ IP+I V + + + + PT PE + Sbjct: 359 IEKLDIRVGDEVYVEKGGEIIPKIVAVELTKRPDNSTPTVYATHCPECHTELVRTEGDAK 418 Query: 403 -YFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 Y +D+ C Q R+ +++ + +DGIG L + LT EQ+ Sbjct: 419 HYCPNDMACPPQVKGRIEHFISRKAMDIDGIGAETVGQLVDAGFINNYADLYDLTVEQVL 478 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 +A+ + + + +++ PF R + +GI Sbjct: 479 PLERMAQKSAENMINGIEASKQVPFERVLFGLGI 512 >UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ2_OPITP Length = 708 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 137/595 (23%), Positives = 247/595 (41%), Gaps = 66/595 (11%) Query: 22 CPAWSPARAQEEISR----LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS 77 C A S + A+ E R L+ +I + DD Y+++ + E+ D YD L L + + FG Sbjct: 31 CAARSVSVAETESLRRLELLRVEIARHDDLYFRKAQPEISDADYDALKQELRELESRFGR 90 Query: 78 E-PRDVMMPPLNG-----------------AVMHPVAHTGVRKMVDKNALSLWMRERSDL 119 PRD G ++ +GVR AL ++ +++ Sbjct: 91 RVPRDPAALRDMGDDRVSGFPKARHRMRMLSLEKTTTESGVRAF--DQALRRLVKPPAEI 148 Query: 120 W--VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL--ANS 175 V+PK DG+A++ Y +G+L + ++RGNG +G+D T I +P ++G Sbjct: 149 AYVVEPKFDGLAISATYEEGRLVRLVTRGNGEEGDDVTAAAGRIRTLPPRLAGAAWPRVV 208 Query: 176 TLQGEIFL-----QREGHIQQQMGG---INARAKVAGLMMRQDDSD-TLNSLGV--FVWA 224 ++GE+FL +R +++ G + R G + + D + L V F Sbjct: 209 EVRGEVFLTFAEFERINRGRRENGRPTFSSPRNLAVGTLKSLEPEDREVRQLDVVFFGLG 268 Query: 225 WPDG---PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGV 279 DG P + L+ +A G + R V + D+ R E ++ L F DG Sbjct: 269 AIDGHAAPASQTQLLEWIAQWGLPSVEDARR-VDSIDDAWRAVQELGGRRSHLAFPIDGA 327 Query: 280 VVRAAKEPESRHWLPGQAE----WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 V++ + G +E W +A+KY P V+ + VG++G I+ VA L P Sbjct: 328 VIKL--DDAVGQTAAGVSEVAPRWAIAFKYAPARVGTRVRGVALQVGRTGVITPVAELEP 385 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI--DDVVWRGAERTKPTPP 393 V L ++ R + + + D+ GD + + G+ IP + D RG P Sbjct: 386 VALAGARITRATLHNASEMERSDLRVGDFVWIERMGEIIPAVVAVDTAQRGTVSAPFVFP 445 Query: 394 EN----------RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH 443 + + +D C + + ++ + + +G+ G+G A AL ++ Sbjct: 446 RDCPGCGALLVRALDDANWRCTNDDCPARQVRKVEHYVSDEGVGIRGLGAASVEALVRSQ 505 Query: 444 RFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP-LTRAALN 502 R I LT ++ ++ +++A++ +RK P R + +G+P + A N Sbjct: 506 RVREIPDLYTLTAAEVTAHTRLSAAQAARVVDAIQRSRKAPLRRVIAGLGLPGIGPAGAN 565 Query: 503 ASDER--SWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 A R Q + E QQ+ G R + + ++L + LAA + Sbjct: 566 ALGARFADLPQFAAARESDLQQVEGLRPESVRALATALSAERTQQLLARLAAAGV 620 >UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1_NOCFA Length = 663 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 129/511 (25%), Positives = 218/511 (42%), Gaps = 58/511 (11%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP-PLN 88 A E I L +I + Y+ EG V D YD + + + + P P PL+ Sbjct: 3 AGERIRELADRIVELRTAYY-EGAPLVADAEYDAVE---DELRALIAAHPELAPDPNPLD 58 Query: 89 ----GAVMH-PVAHT----GVRKMVDKNALSLWMRER---SDLWVQPKVDGVAVTLVYRD 136 AV+H PV H+ + K ++ + ER + V PK+DG+++ LVY D Sbjct: 59 QVGAPAVLHAPVRHSRPMLSLEKATTPEQVAAFF-ERFPGQPVVVMPKLDGLSLALVYED 117 Query: 137 GKLNKAISRGNGLKGEDWTQKV-SLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 G+L +A++RG+G G+D T V +L+ VP+ + P ++GE + R + Sbjct: 118 GRLVRAVTRGDGTTGDDVTMLVRALVDGVPEQIDVP-GRVEVRGEAVMLRSTFLAYNAAH 176 Query: 196 -----INARAKVAGLMMRQDDSDT----LNSLGVFVWAWPDGPQL-MSDRLKELATAGFT 245 IN R AG + +D + L G + G + + L+ L AG Sbjct: 177 PDKPLINPRNAAAGTLRAKDPATVAERRLRFFGFDLDTAEGGAAADLGEGLRALGIAGAA 236 Query: 246 LTQTYTRAVKNAD--EVARVRNEWWKAELPFVTDGVVVRAAKEPE-----SRHWLPGQAE 298 + R +A+ + A E + +L + DG V+R A +R P A Sbjct: 237 M-----RMCADAEQAQAAITDIERGRNDLDYDIDGAVLRLADRDAYAAAGTRSNSPRGA- 290 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 +A+K+ + ++A+ + VGK+GKI VA L PV + V + + + + + D Sbjct: 291 --LAFKFAAEEKTTVLEAVTWDVGKTGKIVPVARLEPVFVGGTTVTKATLANQQVIRARD 348 Query: 359 IAPGDQILVSLAGQGIPRIDDVV----WRGAER--TKPT-------PPENRFNSLTCYFA 405 I GD +LV AG IP + V+ GAE PT P + NS + Sbjct: 349 IKVGDTVLVRRAGDVIPFVAGVLDASKRTGAEVEIVPPTECPSCGQPVTEQGNSRELFCT 408 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI 465 + C Q + RL+ ++ +D IG L + E+ + LT E+L I Sbjct: 409 NASCPAQTVRRLIHWASRAAADIDAIGGVWIERLAEAGILENPSDFYTLTKERLLEFDRI 468 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 + + ++ + +R R ++ + IP+ Sbjct: 469 GEVSATRMIESIDRSRDVGLRRALIGLAIPM 499 >UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN Length = 696 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 119/566 (21%), Positives = 244/566 (43%), Gaps = 70/566 (12%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYD-------QLSARLTQWQRCFGSEPRDVMM 84 E+I +L++ + ++ D Y+ + KS + D +D L + Q++ S P + Sbjct: 29 EKIVKLREDLNKYRDSYYNDNKSLISDYEFDILLKELESLEEKYPQYKEI--SSPTTSVG 86 Query: 85 PPLNGAVMHPVAHTG-------------VRKMVDKNALSLWMRERSDLWVQPKVDGVAVT 131 L V H + + +++ + + ++ K+DG++++ Sbjct: 87 ASLKENKFKKVEHLHPMLSLANSYNIGEIVEFIERIKKKIPKEQELKYCLEVKLDGLSIS 146 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL-----QRE 186 L YR GKL +A++RG+G GED T+ + I+++ +T+ + + ++GE+ L ++ Sbjct: 147 LTYRQGKLVRAVTRGDGFIGEDVTENILEIASIVKTLPQAI-DMEIRGEVVLPLASFEKL 205 Query: 187 GHIQQQMGG---INARAKVAGLMMRQDDSDTLNSLGV------FVWAWPDGPQLMSDRLK 237 + + + G N R +G +RQ DS + G+ V A G + S+ +K Sbjct: 206 NNERLEKGEELFANPRNAASG-TLRQLDSKIVKDRGLDAYFYFLVEADKLGLKSHSESIK 264 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE---LPFVTDGVVVRAAKEP--ESRHW 292 L + G T + + D R+ +W+ E LP+ TDG+V++ + + + Sbjct: 265 FLESMGIKTTGIFELLETSKDIEKRIN--YWEKERESLPYETDGLVIKVDEINLWDEIGY 322 Query: 293 LPGQAEWLVAWKYQPVAQVAEV-KAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W +A+K+ P QV+ V + + VG++GK++ VA L V L KV+R ++ ++ Sbjct: 323 TSKTPRWAIAYKF-PAHQVSTVLNDVTWQVGRTGKLTPVAELQEVELSGSKVKRASLHNI 381 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTPP-----------ENRF 397 Q DI GD++ + A + IP++ + G E+ P E Sbjct: 382 SEIQRKDIRIGDRVFIEKAAEIIPQVVKAIKEERTGNEKVIEEPTCCPICNHKLEREEGL 441 Query: 398 NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP- 456 + C ++ C + + + ++ L + G+G + + L Sbjct: 442 VDIKC--INEECPAKVQGEIEYFVSRDALNIMGLGSKIVEKFIDLGYIKTVVDIFDLKNH 499 Query: 457 -EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI----PLTRAALNASDERSWSQ 511 E L+N + K L + ++ + + + + A+GI +T L A ++ + Sbjct: 500 REALENIDKMGKKSIENLLNSIEESKNRDYDKILYALGIAEIGKVTSKIL-AKASKNIDK 558 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEW 537 L+ T + + G G A ++I + Sbjct: 559 LMAMTFEDLTSIEGIGEIAANEIIAF 584 >UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGA2_9BACT Length = 652 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 116/507 (22%), Positives = 212/507 (41%), Gaps = 60/507 (11%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR------CFGSEPRDVMMPPLNG- 89 L ++ + Y+ E V D YD+L L + + S + V P+ G Sbjct: 6 LVDKLNYYSKKYYVEDDPVVADAEYDKLYNELLRIEAEDPSIISHDSPSQRVGDKPVTGL 65 Query: 90 -AVMHPV-----AHTGVRKMVDKNALSLWMRE-RSDLWVQPKVDGVAVTLVYRDGKLNKA 142 V H + ++ R+ ++K ++W +++ V+PK+DG A+ L Y DGKL + Sbjct: 66 ENVTHEIKLLSLSNAYSREELEKFVENIWDEYPGAEIVVEPKIDGAAMVLTYEDGKLVRG 125 Query: 143 ISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFL-----QREGHIQQQMGG 195 +RG+G GED T + I ++P + SG + ++GE+F+ +R ++ + G Sbjct: 126 ATRGDGTTGEDVTHNIRTIRSLPLEIEKSGRM---IIRGEVFMPVASFERLNRLKGEKGE 182 Query: 196 ---INARAKVAGLMMRQDDSDTLN-SLGVFVWAWP-DGPQLMSDRLKELATAGFTLTQTY 250 N R AG + D L VF++ G + ++ + + GF + + Sbjct: 183 KLFANPRNAAAGTLKLLDSKTAYERGLDVFLYGMDMGGTEHHLKDMELMKSLGFNINEM- 241 Query: 251 TRAVKNADEV-ARVRNEWW---KAELPFVTDGVVVRAAKEPESRHW--LPGQAEWLVAWK 304 TR N +++ A V E+ + L + DG V++ + R +W +A+K Sbjct: 242 TRKFNNFEDIWAHV--EYIGSRRNSLEYDIDGAVIKVDSKAYQRSLGSTIKSPKWAIAYK 299 Query: 305 YQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQ 364 Y V ++ + F VG++G I+ VA L PV L + + + I GD+ Sbjct: 300 YPAQEAVTILRDVDFQVGRTGSITPVAKLEPVFLAGSTISNATLHNEDEIARLGIKIGDK 359 Query: 365 ILVSLAGQGIPR-----IDDVVWRGAER------------TKPTPPENRFNSLTCYFASD 407 + + G IP+ ID+ G+ER +K E N C + Sbjct: 360 VTIRKGGDIIPKVVRPIIDE--RDGSERDIEFLSNCPVCQSKLQKEETDINR-KC--INP 414 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK 467 VC Q +L+ +++ + + G GEA L + + L+ G + Sbjct: 415 VCPAQRKLKLLHFASRKAMDIQGFGEALVNKLVDDGELHDVADIYEKRFDYLKEEDGYGE 474 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGI 494 +L ++K+PF + + +GI Sbjct: 475 KSVQKLHEAIENSKKKPFDKVLYGLGI 501 >UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=DNLJ_HAMD5 Length = 702 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 134/610 (21%), Positives = 239/610 (39%), Gaps = 104/610 (17%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-------------GSE 78 E+I++L+ +K + Y E+ D YD L +L +W+ + G+ Sbjct: 6 EKINQLRDVLKHHEYLYHVNDAPEITDAEYDALLEKLREWESQYPELMNPDSPTQKVGAS 65 Query: 79 PRDVMMPPLNGAVMHPVAHTGVRKMVD----------------------KNALSLWMRE- 115 P P V H V + + D K +L+ +R+ Sbjct: 66 PSTAFKP-----VTHQVPMLSLDNVFDEKGFLAFNKRVSERLEAESSAQKASLNPLVRDS 120 Query: 116 ----RSDLWVQP--------KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISA 163 RS+ VQ K+DG+AV+L+Y G+L +A +RGNG +GE+ T + I + Sbjct: 121 DQKNRSEKNVQEALTFCCELKLDGLAVSLIYEKGELTQAATRGNGFQGENITHNIRTIQS 180 Query: 164 VPQTVSGPLANSTLQ--GEIF--------LQREGHIQQQMGGINARAKVAGLMMRQDDSD 213 +P + G ++ GE++ L ++ + N R AG + + D Sbjct: 181 IPLRLKGKALPQRIEIRGEVYMPQAGFEKLNKQARANHEKIFSNPRNAAAGSLRQLDPHI 240 Query: 214 T----LNSLGVFVWAWPDG--PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW 267 T LN V G PQ RL +L G + T A++V E Sbjct: 241 TAQRPLNFFCYGVGLLEGGVLPQSHIQRLMQLKAWGLPVHDRITLCT-GAEQVMAFYQEI 299 Query: 268 --WKAELPFVTDGVVVRAAKE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGK 323 +A L F DG+V++ E +L W A+K+ + +V ++F VG+ Sbjct: 300 AQARATLGFDIDGIVIKVDDVLLQEKLGFLAKAPRWATAFKFPAQEKTTQVLGVEFQVGR 359 Query: 324 SGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR 383 +G ++ VA L PV L V N+ + + GD ++V AG IP+I +V+ Sbjct: 360 TGALTPVARLEPVELGGALVSNANLHNADEIARLGLRIGDTVVVRRAGDVIPQIVNVIIE 419 Query: 384 GAERTKPTPPENRFNSL---TCYFASDV-----------------CQEQFISRLVWLGAK 423 + P+N + C V C Q L A+ Sbjct: 420 -------SRPQNTVEIIFPHHCPICKSVAKRIEGEAVIRCTGGLFCPAQRKEALKHFVAR 472 Query: 424 QVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQ 483 + L ++G+G+ L ++ LT E+L + + + + L + ++K Sbjct: 473 RALDIEGLGDKIIHQLVDKKYVQNPADLFHLTSEKLLSLKRMREKSAQNLLNSLKKSQKT 532 Query: 484 PFTRWVMAMGIPLTRAALNASDERSWSQLLFSTE---QFWQQLPGTGSGRARQVIEWKEN 540 F R++ A+GI A+ + QL + + +++P G A+ ++++ N Sbjct: 533 TFARFLYALGIREVGETTAANLALYFGQLDLLRKADIETLKKVPDVGEVVAKNLVDFFGN 592 Query: 541 AQIKKLGSWL 550 +++ S L Sbjct: 593 EHHQQVISAL 602 >UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV4_9BACT Length = 675 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 125/580 (21%), Positives = 239/580 (41%), Gaps = 72/580 (12%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR------CFGSEPRDVMM 84 +E +L++ + Q+ +Y+ + V D +YD L L + + S + V Sbjct: 7 RERAIKLRELLSQYSYEYYVLDRPSVADAIYDSLFGELKKLEAEHPELITADSPTQRVGG 66 Query: 85 PPLNG--AVMHPVAHTGVRKMVDKNALSLW----------MRERSDLWVQPKVDGVAVTL 132 P+ V H + + + + W M E+ + + + K+DG+A +L Sbjct: 67 VPIAKFQKVEHRTRMLSLNDVFSREEVEAWLLRVRKLAPEMDEKVEFFAEVKMDGLACSL 126 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN-------STLQGEIFLQR 185 +Y +GKL +A++RG+GL GED T V I +VP + + + ++GEI + + Sbjct: 127 IYENGKLVRAVTRGDGLVGEDVTSNVRTIPSVPLALRTNKEDWRFLKGITEVRGEIVMFK 186 Query: 186 EG----HIQQQMGG----INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLK 237 + + Q + G N R AG +RQ D + ++ A+ L+ D Sbjct: 187 KDFELLNAQLEQEGKKTYANPRNLAAG-TIRQLDPRLVAQRKLYFLAY----DLLRDDPA 241 Query: 238 ELAT----------AGFTLTQTYTRAVKNADEVARVRNEWWKA--ELPFVTDGVVVRAAK 285 E+ T GF + + +++ DE+ W K +LP+ TDG+V++ Sbjct: 242 EVPTWEMAYRIVRELGFRSNRD-AKVIQSVDELVEFAESWEKKRFDLPYNTDGMVIKLND 300 Query: 286 EPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 R + +A+KY +K I ++G++G + VA L PV++ V Sbjct: 301 RALYRALGVVGKNPRGAIAYKYPAEQATTRIKDIFVSIGRTGAATPVAMLEPVVIAGSTV 360 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTP---PENRF 397 Q + + + + GD ++V AG IP + + + G+E+ P PE Sbjct: 361 QMATLHNEDEVKRKGVLIGDTVVVQKAGDIIPEVISPIEKLRNGSEKAFKMPKNCPECET 420 Query: 398 NSL--------TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + + C + +C + + +K L +DG+GE AL + Sbjct: 421 DLVRPEGEAVWRC--PNPICPAKTWRSIQHFASKAALDIDGMGEKNVAALLDAGLIKDAA 478 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRA--ALNASDE- 506 +L EQ+ A + +L + P +++ A+GI A A++ + Sbjct: 479 DLYVLKKEQILELERFADISAGKLIDAIAAKKHPPLAKFLFALGIRHVGAQTAIDVTAHF 538 Query: 507 RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKL 546 S + + +T ++ G G A ++ W E+ + + L Sbjct: 539 GSLTAIRQATIDQLHEVEGVGEVVAESIVAWFEDPEHQAL 578 >UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ1_OPITP Length = 675 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 129/532 (24%), Positives = 220/532 (41%), Gaps = 73/532 (13%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQW-----QRCFGSEP- 79 +P AQ I+ L+ Q+ + D+ Y + + ++ D YD L L + Q G+ P Sbjct: 2 TPVEAQSRIAELRAQVARHDELYHRRAQPQIGDFEYDALKRELAELEAAWPQFARGASPT 61 Query: 80 ----------------RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQP 123 R+ MM ++ + + T +R+ D+ L R+ ++P Sbjct: 62 EQVGDDRTEGFQVYRHRERMM-----SLDNTYSETELREFHDRLVRELE-RDGLKFVIEP 115 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----PL-ANSTLQ 178 K+DG+AV++ Y GKL +A++RGNG++G+D T I ++P+ + PL A ++ Sbjct: 116 KIDGLAVSITYEKGKLVRAVTRGNGIEGDDITTNALTIKSLPRELKRADGVPLPAVIEIR 175 Query: 179 GEIFLQREGHI----QQQMGG----INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQ 230 GE+FL E + Q++ G N R AG ++Q D + + V + G Sbjct: 176 GEVFLTTEEFLRINRQREEAGEPLYANPRNLAAG-TIKQLDPREVAQRKLEVVLYGRGYV 234 Query: 231 LMSDRLKELATA--------GFTLTQTYTRAVKNADEV-ARVRN-EWWKAELPFVTDGVV 280 + L E G + + A ADE+ A V+ + + + TDG V Sbjct: 235 EPASALPETQAQFHGWVKAWGLPTVERFWTAT-GADEIWAAVQELDALRDTFAYATDGAV 293 Query: 281 VRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVML 338 V+ P R W +A+K+ P +++AI VG++G ++ VA L PV L Sbjct: 294 VKLDAVPLQRRAGSTSKSPRWAMAYKFAPDRAETQLRAITVQVGRTGVLTPVAELDPVQL 353 Query: 339 DDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV--VWRGAERTKPTPPEN- 395 V R + + DI GD + V AG+ IP + V R E PE Sbjct: 354 AGTTVSRATLHNRDEIARKDIRVGDFVYVEKAGEIIPAVIGVNPARRAPECVPYVFPEKC 413 Query: 396 -RFNSLTCYFASDV--------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ---TH 443 + +V C Q R+ +K + ++G+GEA L + H Sbjct: 414 PECGTAVVQLEGEVAVRCPNFSCPVQVRRRVQHFASKACVDIEGMGEAMVDVLVEKGWVH 473 Query: 444 RFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 I+ L E L + + +L +++ R++ +GIP Sbjct: 474 SVPDIYQ---LKRENLLTLGKSVEKSTDKLLEAIEASKRAELWRFIHGLGIP 522 >UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS Length = 672 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 131/595 (22%), Positives = 235/595 (39%), Gaps = 77/595 (12%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-------------G 76 A++ I L+ +I+ + Y++ E+ D YD L L ++ F G Sbjct: 7 ARKNIEDLKARIEYHNRRYYQLDDPEISDAEYDSLLQELIALEKQFPQWLTEDSPSRRIG 66 Query: 77 SEPRDVMMPPLNGAVMHPVAHTGVRKMV---DKNALS-LWMRERSDLWVQPKVDGVAVTL 132 + P P ++ + M +A+ + + D+ L ER V+PK+DGVAV L Sbjct: 67 AAPLSKFAPAVHLSPMLSLANAFSEEEILEFDRRLKRFLDSSERLSFVVEPKIDGVAVNL 126 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS-----TLQGEIFLQ--- 184 +Y G L +RG+G KGED TQ + + +P + ++GEI+++ Sbjct: 127 IYSSGVLTTGATRGDGAKGEDVTQNIRTLHTIPLKIQNGSDERLPEQIEIRGEIYMETAA 186 Query: 185 -REGHIQQQMGG----INARAKVAGLMMRQDDSDTLNS-LGVFVWAW----PDGPQLMSD 234 R+ + ++ G N R AG + + D S T L +F +A D Sbjct: 187 FRKLNERRLAAGEPPFANPRNAAAGSLRQLDASITARRPLKMFCYAVGIVRGRAFTYHHD 246 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK-EPESRH 291 L L GF++ + R V+ ++ E + ELP+ DG+V++ ++R Sbjct: 247 VLHALKKWGFSV-NPFIRQVEGIEKCIEFYRELQDLRNELPYEIDGMVIKVDDLSLQTRL 305 Query: 292 WLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 ++ W VA K+ ++ I VG++G ++ VA + PV + V R + + Sbjct: 306 GAVSRSPRWAVACKFAATQATTVIRDIIVNVGRTGTLTPVALMTPVKVGGVTVSRATLHN 365 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQ 410 + DI GD +LV AG IP + V+ NR + D C Sbjct: 366 QDEIDKKDIRIGDTVLVQRAGDVIPEVVKVIV-----------SNRSGREIPFKIPDTCP 414 Query: 411 E--QFISRLVWLGAKQVLGL---------------------DGIGEAGWRALHQTHRFEH 447 E + RL A + +GL +G+G+ L Sbjct: 415 ECGSEVVRLAGEAAHRCIGLSCPAQLRRHIQHFVSRGGMDIEGLGDKLVSQLVNQKLIHD 474 Query: 448 IFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALN---AS 504 L+ + L N +A+ + L L++ + + A+GI ++ A Sbjct: 475 PADLYYLSHDALLNLERMAEKSVSNLLSAIELSKHPSLDKIIFALGIRHVGEHISKILAR 534 Query: 505 DERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 R+ L+ +TE + G + ++E+ NA +++ L ++ E Sbjct: 535 RFRTLDALINTTENELLAIRDIGPEVSSSILEFFRNASNRRVIEKLKKAGVSPLE 589 >UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNLJ_MYCPU Length = 679 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 98/451 (21%), Positives = 193/451 (42%), Gaps = 57/451 (12%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPV 95 L +++K ++ Y+ + +S V D YD L + F E V + +V+ V Sbjct: 14 ELNEKLKLYNHHYYNKNESLVSDEYYDAKLLELENIRDNFPEEYNQVFQKDFSKSVLEKV 73 Query: 96 AHTGVRKMVDK------------------------NALSLWMRERSDLWVQPKVDGVAVT 131 H + + K N ++ ++ +Q K+DGV+++ Sbjct: 74 NHLDEQDVKLKKEKHQKLMLSLNKAYSFEDLERYTNRINTFVGNNHQYILQEKIDGVSIS 133 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQ------- 184 L Y +G L KA++RG+G+ GE+ T I +P+T++ N L+GEIF Sbjct: 134 LYYENGILTKALTRGDGIYGENVTHNALNIKDIPKTINIK-ENIELRGEIFFSLKLFESL 192 Query: 185 REGHIQQQMGGINA-----RAKVAGLMMRQDDSDTLNSLGVFVW--AWPDGPQLMSDR-- 235 + + +Q G N R K +G++ +D + L F++ P+ L + + Sbjct: 193 KNEFLDKQDGTKNKKWNTPRNKASGILKSLKTTDESSWLSCFIYEVVSPENFNLKTQKQL 252 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPG 295 L GF L + +N E ++ + + DG+V++ S + L G Sbjct: 253 FDFLKIQGFNLPKFEFIENENLIENFITNFKFEDDQRDYEIDGLVIKLN--DLSLYDLLG 310 Query: 296 QAEWL----VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 + +A+K++ + +++ I VG++G I+ A L V+L+ K++ + + Sbjct: 311 KTSKFFHHSIAYKFRKKFVMTKIEDIFVTVGRTGLITYNAKLQEVVLNGSKIKAATLHNY 370 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE------NRF----NSLT 401 + I GD++ + AG+ IPR+ +V ++ +P E N+ N L Sbjct: 371 EYIKNIKINIGDKVYIEKAGEIIPRVVKLVSPKNDQNYFSPIEFCPSCKNKLSWSENMLN 430 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIG 432 + + C E+ I +L + +K + + +G Sbjct: 431 QFCLNPDCIEKKIQKLKYFVSKDGMEIQELG 461 >UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD Length = 672 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 123/529 (23%), Positives = 216/529 (40%), Gaps = 79/529 (14%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARL--------------TQWQR 73 ARA+E L +++ + Y+ EV D YD+L L + QR Sbjct: 9 ARARE----LHRELAHHNYRYYVLDSPEVSDAQYDKLMRELQDLEAKHPSLQTPDSPTQR 64 Query: 74 CFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW--------VQPKV 125 G+ + G V+H + + + L+ + L +PK+ Sbjct: 65 VGGAAAEEF------GEVVHRAPMISLANIFEDQGLTEFDERIRKLVGLPGIAYVCEPKL 118 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL------QG 179 DG+A+ L Y G + +RG+G GED T + I ++P ++ P + + +G Sbjct: 119 DGLAIALRYEKGAFVQGATRGDGTTGEDVTSNLRTIRSLPMSLF-PQDDVKVPDVLEVRG 177 Query: 180 EIFL-----QREGHIQQQMGG---INARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG-- 228 E+F+ Q+ +++ G N R AG + + D T L VF++ G Sbjct: 178 EVFIRKKDFQKLNEKREEEGEPLFANPRNAAAGSLRQLDPRMTAARPLSVFLYECVPGEG 237 Query: 229 -PQLMS--DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA--ELPFVTDGVVVRA 283 P + ++L+ L T G + Q Y RA + + V + + K ELPF DG+VV+ Sbjct: 238 VPVFKTHIEKLEYLKTLGLPINQ-YRRA-EGLEGVRQAYDASLKGRHELPFEVDGMVVKV 295 Query: 284 AKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 E + + + W VA+K+ P + EV I VG++G ++ VA L PV + Sbjct: 296 DDEDQRKRLGQVSKSPRWAVAYKFPPEEESTEVMDIGIQVGRTGALTPVAHLKPVKVGGV 355 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP-------- 393 V R + + + D+ GD + V AG IP I VV ++R + P Sbjct: 356 TVARATLHNEDELRRKDVRKGDTVFVRRAGDVIPEIVSVVL--SKRPADSAPFEFPKHCP 413 Query: 394 --------ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRF 445 + + C AS C Q + ++ ++ + ++G+G+ L T R Sbjct: 414 VCDAVATKDEDGAIIRCTGAS--CPAQLVEKIRHFASRLAMDIEGLGDKLAAQLVSTGRV 471 Query: 446 EHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + LT E L + + L +++ R++ ++GI Sbjct: 472 KAFADLYALTKEDLLTLERMGDKSADNLIASLERSKQTTQRRFLYSLGI 520 >UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI Length = 774 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 113/416 (27%), Positives = 187/416 (44%), Gaps = 44/416 (10%) Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQT--VSGPLANS 175 D + K+DG A+ L Y +G L + +RG+G+ GED TQ V I+++P V P Sbjct: 157 DYICELKIDGSALALTYENGLLVRGATRGDGIMGEDITQNVKTINSIPLKLKVDNPPLLV 216 Query: 176 TLQGEIFL-----QREGHIQQQMGGI---NARAKVAGLMMRQDDSDT-----LNSLGVFV 222 ++GE FL + ++++G I N R AG +RQ DS L+ + Sbjct: 217 EVRGEAFLSINVFENINAEREKIGEIIFANPRNAAAG-TLRQLDSKIVAKRRLDFFAYTL 275 Query: 223 WAWPDGPQLM-----SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWK--AELPFV 275 + + + S L+ L GF + + + +EV W K LP++ Sbjct: 276 YLEENESNFLQFYTQSQCLELLKKLGFKVNPN-GQVCSSLNEVEAYYQYWDKQRENLPYL 334 Query: 276 TDGVVVR--AAKEPESRHWLPGQAEWLVAWKYQPVAQVAE-VKAIQFAVGKSGKISVVAS 332 TDGVVV+ + E + W +A KY P ++ V+ + VG++G I+ VA Sbjct: 335 TDGVVVKLNSLSLQEKLGFTQKYPRWAIALKY-PAEEIPTIVQGVTVQVGRTGAITPVAE 393 Query: 333 LAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV----WRGAERT 388 L PV L VQR ++ + R E D+ GD ++V AG+ IP + V+ + A+R Sbjct: 394 LKPVQLAGTTVQRASLHNSDRLAELDLHIGDTVIVRKAGEIIPEVVRVLPELRPKKAQRF 453 Query: 389 K-PTP-PEN-------RFNSLT-CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRA 438 + PT PE R ++T C S C L ++ L ++G+GE + Sbjct: 454 QMPTHCPECSQPLIKPRNEAVTRCINTS--CPAILRGSLAHWASRAALDINGLGEKLVQQ 511 Query: 439 LHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 L + + + LT E L + + K + +L ++ QP+ R + +GI Sbjct: 512 LVNSGLVKSVADLYNLTMEDLTSLERMGKKSANKLIEAMGTSKAQPWRRVLYGLGI 567 >UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ_MAGSM Length = 768 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 144/581 (24%), Positives = 241/581 (41%), Gaps = 68/581 (11%) Query: 29 RAQEEI--SRLQQQIKQWDDDYWKE------GKSEVEDGVYDQLSARLTQWQRCFGSEPR 80 R QE + S + + ++ + D+Y G+ +GV ++ RL Q EP Sbjct: 95 RVQEGLAESVVVEAVQHYQDEYGLSDLGALVGRPGALEGVARDVTQRLNQTLSFV--EP- 151 Query: 81 DVMMPPLNGAVMHPVAHTGVRKMVD-KNALSLWMRE---RSDLWVQPKVDGVAVTLVYRD 136 + PP +++ + RK D L LW E R + +PK+DG+A +L Y + Sbjct: 152 --LQPPDTKSLL-----SSGRKAADILRRLRLWAAEQPQRVEYVAEPKLDGLAFSLTYAE 204 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIF--------LQRE 186 G L +A +RG+G +GED T I VP + G + L+ GE++ L E Sbjct: 205 GVLVRAATRGDGQEGEDVTAHARTIQDVPLRLQGAGYPALLEVRGEVYMPLATFEKLNAE 264 Query: 187 GHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG---PQLMSDRLKELATA- 242 + + N R AG +RQ D S G+ ++ + G ++DR E+ A Sbjct: 265 ARERGEKTFANPRNAAAG-SLRQLDPKITASRGLRMFCYGTGYVEGGTLADRYAEILAAL 323 Query: 243 ---GFTLTQTYTRAVKNADEVARVRNEWWKAE-LPFVTDGVVVRAAKEP--ESRHWLPGQ 296 G ++ R +A K E LP+ DG V++ + E ++ Sbjct: 324 KGWGLRVSPEAERVEGAQGCLAYTERLGEKRETLPYEIDGAVLKVDSQRLRERLGFVARA 383 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K+ + V+AI VG++G I+ VA L PV + V + + Sbjct: 384 PRWAMAFKFPATEESTTVQAIDLQVGRTGVITPVARLEPVAVGGVTVTNATLHNFLELAR 443 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERT--------------KPTPPENRFNSLTC 402 D+ GD+++V AG IP + V+ R + PT E +L C Sbjct: 444 KDVRVGDRVIVRRAGDVIPEVVRVIPRESHGALAVYKEPVACPVCGAPTEREGGETALRC 503 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNT 462 C+ Q + +++ + ++G+G+ L Q E I S L EQ Q Sbjct: 504 S-GGLTCRAQVKEGVKHFASRKAMNIEGLGDKLVALLMQAGLVERI-SDLYRLHEQRQVL 561 Query: 463 PGIAK--SKS-AQLWHQFNLARKQPFTRWVMAMGI---PLTRAALNASDERSWSQLLFST 516 G+ + KS A L ++ Q R++ +GI +T A A+ S L+ +T Sbjct: 562 VGLERLGGKSVANLLEAIEQSKAQSAARFLFGLGIRDVGVTLAGSLAAHFTSLDALMAAT 621 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + + G AR+V+ + A G+ LAA + G Sbjct: 622 VEDLVGIEDVGEVVARRVVHFFAQAH---HGAELAALRALG 659 >UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL Length = 859 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 126/528 (23%), Positives = 206/528 (39%), Gaps = 91/528 (17%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARL--------------TQWQRCFGS 77 + I L + ++ +Y+ V D YD+L L + QR G Sbjct: 43 QRIKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRV-GG 101 Query: 78 EP--------RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMR-----ERSDLWVQPK 124 EP +V M L A P GV + A + E+ + ++PK Sbjct: 102 EPLAGFDEVRHEVPMLSLTNA-FSPQDENGVFDHAEMYAFDERVHGGLNGEKPEYVIEPK 160 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIF 182 DG+A++L+YRDG L +A +RG+G GED TQ V +S +P + G ++ GE+ Sbjct: 161 FDGLAISLLYRDGVLTQAATRGDGTTGEDVTQNVKTVSNIPLRLHGENIPELIEIRGEVL 220 Query: 183 LQREG----HIQQQMGG----INARAKVAGLMMRQDDSDTL--NSLGVFVW--AWPDGPQ 230 + + + +Q G N R AG +RQ DS L F + A G Sbjct: 221 MLKADFAALNARQAENGQKPFANPRNAAAG-SLRQLDSRITAQRKLHFFPYSIARQQGGF 279 Query: 231 LMSDRLKELATA---GFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVR--A 283 + + L+EL+ GF+L + N DEV + + LP+ DG+VV+ + Sbjct: 280 IAEEHLQELSYCKELGFSLPDSNFGCFPNIDEVLAFYEQMQQKRPTLPYEIDGMVVKVNS 339 Query: 284 AKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 + E ++ W +A K+ + V+AI +G++G ++ VA L PV + V Sbjct: 340 LAQQEKLGFISRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTV 399 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTK------------ 389 + + D+ GD ++V AG IP + V++ R + TK Sbjct: 400 TNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETKISVSDGLQDDLF 459 Query: 390 -PTPPENRFNSL-----------TCYFASD--------------VCQEQFISRLVWLGAK 423 TP E R + C+ + +CQ Q L+ ++ Sbjct: 460 AETPSETRSEPIHKPYRLPTHCPICHSEIEREEGEAVARCSGGMLCQAQRAQGLIHFASR 519 Query: 424 QVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSA 471 + + +DG+G+ L H L LQ A SA Sbjct: 520 KAMDIDGLGQKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKASA 567 >UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A405_9BACT Length = 761 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 123/492 (25%), Positives = 199/492 (40%), Gaps = 87/492 (17%) Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST---- 176 V+PK+DGV+++L Y GKL +AI+RG+G +G+D T V I +P T+ +T Sbjct: 159 VEPKIDGVSISLTYEHGKLTQAITRGDGTEGDDVTANVKTIHGLPHTLCHAPGTTTPLPA 218 Query: 177 ---LQGEIFLQREG----HIQQQMGG----INARAKVAGLMMRQDDSDTLNS--LGVFVW 223 ++GEIFL+ E + QQ+ G N R AG ++Q D + S L + ++ Sbjct: 219 LIEIRGEIFLREEEFRRINQQQEEAGDAPYANPRNLAAG-TLKQLDPTLVASRRLEIVLY 277 Query: 224 AWPDGPQLMSDRLKELAT--AGFTLTQTYTR--------------AVKNAD-------EV 260 + T GF TY R +V+ D E+ Sbjct: 278 GLGACEPAVPPPPPSAPTDALGFDSQTTYQRQLIAWGLPTVEKIWSVRGIDAVWTAIQEL 337 Query: 261 ARVRNEWWKAELPFVTDGVVVR-----------------AAKEPESRHWLPGQAEWLVAW 303 R+R + + TDG VV+ + E+R P W A+ Sbjct: 338 DRLRRTFA-----YATDGAVVKLDLFAQQKILGYRGADATGRAQEARKLSP---RWACAF 389 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 K+ P ++AI VG++G ++ VA L PV+L V+R + + D+ D Sbjct: 390 KFPPDRAKTRLRAITIQVGRTGVLTPVAELDPVLLAGSTVRRATLHNADEIARKDVRIND 449 Query: 364 QILVSLAGQGIPRIDDVVWRGAERTKPTP-----PEN--RFNSLTCYFASDV-------- 408 +L+ AG+ IP + +V+ E+ P P+N N+ +V Sbjct: 450 TVLIEKAGEIIPAVINVI---VEKRPPDSIPYAFPQNCPACNTPAVRIEGEVAWRCLNPH 506 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKS 468 C + R+ +K L ++G+G L + + I LT EQL ++ Sbjct: 507 CPGKMRRRIAHFVSKACLDIEGLGREIVELLLDHNLIKTIPDLFRLTREQLLPLKKSGET 566 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIP---LTRAALNASDERSWSQLLFSTEQFWQQLPG 525 S L + R R + +GIP A A RS L +T ++LP Sbjct: 567 WSGNLINAIAARRTADLWRVIHGLGIPQVGAAAAKNLARAFRSLDALAAATLPDLERLPD 626 Query: 526 TGSGRARQVIEW 537 G+ A+ V +W Sbjct: 627 FGATTAQAVRDW 638 >UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA Length = 666 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 139/587 (23%), Positives = 233/587 (39%), Gaps = 84/587 (14%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------------ 75 A A++ + L++ I++ + Y+ + + D YD L L + + Sbjct: 4 AAARQRVEELRRLIEEHNYRYYVLDQPSISDREYDALMQELIALEEAYPELRTPDSPSQR 63 Query: 76 -GSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQP-------KVDG 127 G PR+ V HP + ++ L + R DL +P K+DG Sbjct: 64 VGGAPREEF-----NQVRHPQVLLSLNDAFNEGDLLEFDRRVRDLAGRPVEYVIEAKIDG 118 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 +AV L YRDG +RG+G GE+ T + I A+P + PL ++GE+++ + Sbjct: 119 LAVALTYRDGLFTLGATRGDGQVGEEVTANLKTIPALPLRLRRPLPFLVVRGEVYMPKVA 178 Query: 188 HI-----QQQMGG---INARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQLMSDRLKE 238 +++ G N R AG + + D T + SL +FV+ Q++S E Sbjct: 179 FTALNAAREEAGEPLFANPRNAAAGSLRQLDPKITASRSLSLFVY------QVISLTGAE 232 Query: 239 LATAGFTL---------TQTYTRAVKNADEVARVRNEWW---KAELPFVTDGVVVRAAKE 286 +AT L Y + V W +A LP+ DG+V++ Sbjct: 233 VATQAGALDFLAELGFPVNPYRVVAPDIQAVLEEVKAWTPERRASLPYEIDGLVIKVND- 291 Query: 287 PESRHWLPGQA----EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 + H + G W +A+K+ A V+ I VG++G ++ A L PV L Sbjct: 292 -LALHSVLGATAKAPRWAMAYKFPAEQATARVEGIILRVGRTGVLTPTAVLTPVRLAGTT 350 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV---WRGAER--TKPT------ 391 V R + + +E DI GD ++V AG IP + V+ G+E T P Sbjct: 351 VSRATLHNEDYIREKDIRIGDTVIVQKAGDIIPEVVAVIPERRTGSEEVFTMPERCPACG 410 Query: 392 -----PPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 PP + T A C Q + ++ ++ + + G+G A L + Sbjct: 411 AAVVRPPGEAAHRCTGGLA---CPAQVLEGIIHFASRGAMDIQGLGPAIVAQLLEAGLIH 467 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT--RAALNAS 504 L E L + ++ L ++KQP R + A+GI RAA + Sbjct: 468 DAADLYYLKEEDLLKLERFGQQSASNLLAAIAASKKQPLERLIFALGIRNVGQRAARVLA 527 Query: 505 DE-RSWSQLLFSTEQFWQQLPGTGSGRARQVIEW----KENAQIKKL 546 D S +L +T + LP G A + E+ + A ++KL Sbjct: 528 DHFGSLDKLAAATVEELTALPDIGPRIAENIREFFGEPRNRAVLEKL 574 >UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LK14_HALO1 Length = 751 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 105/410 (25%), Positives = 184/410 (44%), Gaps = 47/410 (11%) Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGE 180 V+PK+DG+ V L Y G +RG+G GED +Q + + +P + + + ++GE Sbjct: 118 VEPKIDGIGVELSYERGAFRLGTTRGDGRVGEDISQNLRTLRGLPLRLREEV-DLIVRGE 176 Query: 181 IFLQRE-----GHIQQQMGG---INARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQL 231 F+ R + + G N R VAG + + D + V ++ G + Sbjct: 177 AFMTRADFTALNEARAEAGEEPFKNPRNTVAGSLKQLDPRLVAERPMQVILYEVVGGERF 236 Query: 232 MSD------RLKELATAGFTLTQTYTRAVKNADEVARVRNEWW-----KAELPFVTDGVV 280 + RL+EL G ++ +RA D A ++ E +AELPF DG+V Sbjct: 237 AREHFEVLARLREL---GLPTSEHNSRA----DSWAALKREVAAWAERRAELPFDVDGLV 289 Query: 281 VRAAKEPESRHWLPGQAE---WLVAWKYQPVAQVAEV-KAIQFAVGKSGKISVVASLAPV 336 ++ + R L ++ W +A+K+ P QV V + ++ VG++G ++ VA L PV Sbjct: 290 IKV-NSFDQRDALGTTSKFPRWAIAYKF-PAQQVTTVIEDLEVNVGRTGAVTPVAMLTPV 347 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP--- 393 + VQR ++ + + + I P D++L+ AG+ IP++ VV R +E+ P P Sbjct: 348 EVSGTTVQRASLHNWDQIERLGIGPKDRVLLEKAGEIIPQVIAVVERASEQVFPRPSTCP 407 Query: 394 --------ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRF 445 E +L C C Q ++ L + + + +DG+GE +AL T Sbjct: 408 SCGHGLIQEPGRVALLCP-NRLACPRQLLASLEFFAGRGQMNIDGLGEKVAQALLDTGLV 466 Query: 446 EHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQP-FTRWVMAMGI 494 ++ L+ E L + + L AR F+R + A+G+ Sbjct: 467 SNVADLFALSKEDLLTLERFGEQSAQNLVDAIARARDSATFSRLLAALGV 516 >UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BDK0_9FIRM Length = 667 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 123/578 (21%), Positives = 239/578 (41%), Gaps = 85/578 (14%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAV 91 +E+ ++ ++I + D Y+ K V DG YD+L +L + Q+ P + + G + Sbjct: 5 DELKKIIERINELDYHYYTLDKPLVSDGEYDKLYNQLIKLQKNLAYVPENSPTNRVGGQI 64 Query: 92 MHPV-AHTGVRKMV--DK----NALSLWMRERS------------------DLWVQPKVD 126 + H + +++ DK + + W+ ER + ++ K D Sbjct: 65 LDKFEKHYHLTRLLSQDKAQSYDEIKEWI-ERCKRLKEAYESTSGERLPNLEFVMEYKFD 123 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL--- 183 G+ + L Y DG L A +RGNG+ GE + I ++P T+ + +QGE + Sbjct: 124 GLTINLTYEDGILKTAATRGNGIVGEQVKAQAETIRSIPFTIKEK-SLLEIQGEALMPLS 182 Query: 184 -----QREGHIQQQMGGINARAKVAGLMMRQDDSDTLN-SLGVFVWAWP------DGPQL 231 +E Q + NAR AG + D +T L + +A P + Sbjct: 183 ELDRYNKENETQLK----NARNAAAGAIRNLDTKETAKRHLTAYFYAVPTNSINFKNEEE 238 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRH 291 M LKE+ + T + +E+ R++ E + L +TDGVV++ + +++ Sbjct: 239 MLSFLKEMKLNVHPYHKKVTSLDEIINELERIKEE--RKTLDVLTDGVVIK-INDKKTQE 295 Query: 292 WLPGQAE----WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 L G E W +A+K++P ++ + + VG++GK++ A L PV V R Sbjct: 296 VL-GVTEKFPRWSIAFKFEPEEFTTKLLDVIWNVGRTGKVTPSAILEPVDFSGVTVSRAT 354 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT----KPTPPENRFNSLTC- 402 + + + + G + + + IP I VV T KPT C Sbjct: 355 LNNYDDIERKKVKIGSDVFIRRSNDVIPEILGVVDENQPGTIKIEKPTH---------CP 405 Query: 403 YFASDVCQE--------------QFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 Y S++ QE Q ++R+ ++ + ++G+ E L + + I Sbjct: 406 YCHSELIQEKVHIVCPNSISCTPQLLARMEHYASRNAMDIEGLSEKTIGQLIEELSIKEI 465 Query: 449 FSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT--RAALNASDE 506 + LT ++L K+ L + ++ + ++ A+GIP R A + +++ Sbjct: 466 YDIYDLTYDELIKLERFGHKKAKNLLASIDNSKNRDLDAFIYAIGIPNVGERTARDLANK 525 Query: 507 -RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQI 543 +S+ +L +T ++ G ++E+ + I Sbjct: 526 FKSFDKLRNATVDELIEIDDIGEITGENIVEFFHDKNI 563 >UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN Length = 669 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 107/458 (23%), Positives = 195/458 (42%), Gaps = 40/458 (8%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DG+AV+L Y G+ + +RG+G+ GED TQ + I A+P + + ++GE ++ Sbjct: 116 KIDGLAVSLHYEKGRFIQGSTRGDGITGEDITQNLKTIKAIPLRLQEEVT-LEVRGEAYM 174 Query: 184 QREGHIQ-----QQMGGI---NARAKVAGLMMRQDDSDTL--NSLGVFVWAWPD--GPQL 231 + ++ +Q G N R AG +RQ D +L +FV+ D G + Sbjct: 175 PKRSFVKLNEEKEQNGEAVFANPRNAAAG-SLRQLDPKIAAKRNLSMFVYGLADIEGKTI 233 Query: 232 MS--DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRA--AK 285 S + L L GF T R + +EV EW + L + DG+V++ Sbjct: 234 TSHSEALDFLGELGFK-TNPNRRICETIEEVIAYVEEWQEKRPNLDYEIDGIVIKVDDVT 292 Query: 286 EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 E W +A+K+ V + I+ +VG++G ++ A L PV + V+R Sbjct: 293 LQERLGTTAKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRR 352 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAERTKPTPPEN------- 395 ++ + +E DI GD ++V AG IP + +VV+ G E P Sbjct: 353 ASLHNEDLIREKDIRIGDYVVVKKAGDIIPEVVNVVFDKRTGKEEAYHMPTHCPTCDSGL 412 Query: 396 -RFN---SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 R +L C + C Q L+ ++ + +DG+GE L + + Sbjct: 413 VRLEEEVALRCI--NPACPAQIREGLIHFVSRNAMNIDGLGERVITQLFEANYIRTFADL 470 Query: 452 LLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT--RAALNASDE-RS 508 LT +QL + ++ L +++ R + +GI +AA ++ + Sbjct: 471 YGLTKDQLLQLDRFGEKSASNLVQAIEASKENSLERLLFGLGIRHVGAKAARTLAEHFET 530 Query: 509 WSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKL 546 L+ + E+ + + G A+ ++ + +N + L Sbjct: 531 MDNLVKAGEEELKAINEIGEKMAQSIVTYFDNEDVLHL 568 >UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD Length = 690 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 102/455 (22%), Positives = 187/455 (41%), Gaps = 44/455 (9%) Query: 89 GAVMHPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGVAVTLVYRDGKLN 140 G V HP ++ + +++ + + RE +PK DG+AV L+Y DG+L Sbjct: 88 GTVTHPAPMLSLKAVYEEDEVRNFAETCREELGRETVTYIAEPKFDGLAVELIYEDGRLV 147 Query: 141 KAISRGNGLKGEDWTQKVSLISAVP---QTVSGPLANS-TLQGEIFLQRE-----GHIQQ 191 + +RG+G GE+ T V I VP + + P+ + ++GE +++++ ++ Sbjct: 148 QGATRGDGETGEEITANVKTIKGVPLRLRDDARPVPDRLVVRGEAYMRKDEFNAFNRRRE 207 Query: 192 QMGG---INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGP------QLMSDRLKELATA 242 + G N R AG +RQ DS+ + ++ + P ++ L+ L Sbjct: 208 EEGKKVFANPRNAAAG-SLRQLDSNITARRPLRIYFYEIAPVDGRDFATHAEVLEALPEW 266 Query: 243 GFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK--EPESRHWLPGQAE 298 G + + + R D + +LP+ DG+V++ E+ Sbjct: 267 GLRVCEDHIRRCDGIDAALAHHAALVDRRDDLPYEIDGLVIKVNDFDGHETLGVRDRDPR 326 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W A+K+ P ++ + VG++G+I+ VA LAPV + +V R ++ + D Sbjct: 327 WAAAYKFPPRRATTSIEDLFVQVGRTGRITPVAVLAPVEVGGVEVTRASLHNQNEIDRKD 386 Query: 359 IAPGDQILVSLAGQGIPRIDDVVW---RGAERTKPTPPENRFNSLTCYFASD-------- 407 I GD +L+ AG IP++ V+ G E P + D Sbjct: 387 IRIGDTVLIERAGDVIPQVVKVIEDERDGTEAPYHIPDACPVCGSEVVLSDDKKQAFCTG 446 Query: 408 --VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI 465 C QF RL +++ ++G+G+ L + I L L Sbjct: 447 GMTCPAQFRERLKHYASREATDIEGLGDKRAEQLIDAGLIQTISDLYELEKADLLQLERY 506 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA 500 A + L + + +Q R++ A+GIPL +A Sbjct: 507 ADKSAQNLIDEIEASLEQDLDRFLYALGIPLVGSA 541 >UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_EIKCO Length = 778 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 127/545 (23%), Positives = 216/545 (39%), Gaps = 87/545 (15%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP---- 86 Q+ I L Q + ++ +Y+ V D YD+L L + +E +P Sbjct: 5 QQRIRTLVQTLNRYAHEYYTLDAPSVPDAEYDRLYRELEALE----AEHPQFRLPESPTQ 60 Query: 87 -LNGAVM---HPVAHTGVRKMVDKNALS--------------LWMRER--SDLWV----- 121 + GAV+ V H V + NA S L ER +L V Sbjct: 61 RVGGAVLDGFETVVH-AVPMLSLNNAFSPRDDETGAFDHAEFLAFDERVCKELGVAQVEY 119 Query: 122 --QPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ- 178 +PK DG+AV+L+Y++G L +A +RG+G GE+ T+ + + +P + G + L+ Sbjct: 120 AAEPKFDGLAVSLLYQNGILVQAATRGDGTTGENVTENIKTVRNIPLRLHGEKQPALLEV 179 Query: 179 -GEIFLQREGHI---QQQMGG-----INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG- 228 GE+ + + Q+Q+ N R AG +RQ DS + +A+ Sbjct: 180 RGEVLMLKADFAALNQRQLEAGQKPFANPRNAAAG-SLRQLDSKITAQRKLHFFAYGIAQ 238 Query: 229 -------PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARV--RNEWWKAELPFVTDGV 279 P+ + L L GF+L + Y A A V R R + LP+ DG+ Sbjct: 239 LSGVERLPESHMEELALLHEIGFSLPKGYFGAYTGAAAVLREYERLAEHRPRLPYEIDGM 298 Query: 280 VVRAAKEPESRH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVM 337 VV+ E + ++ W +A K+ + V+AI VG++G ++ VA LAPV Sbjct: 299 VVKVNSLAEQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGAVTPVARLAPVF 358 Query: 338 LDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRG---------AERT 388 + V + + D+ GD ++V AG IP + V+ E+ Sbjct: 359 VGGVTVTNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVLLERRPMQPVDLLGEQM 418 Query: 389 KPTPPENRFNSLTCYFASDV----------------CQEQFISRLVWLGAKQVLGLDGIG 432 +P R S V CQ Q L+ +++ + + G+G Sbjct: 419 EPLHEPFRLPETCPVCGSAVEREAGEAVARCTGGMLCQAQRAQGLIHFASRKAMDIAGLG 478 Query: 433 EAGWRALHQT---HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWV 489 + AL H F I+ + + +++ A + + +R P R++ Sbjct: 479 DKQIEALVAADVLHSFADIYRLDIAKLQTIKDGKSAATKWAQNILDSIAQSRTPPLARFL 538 Query: 490 MAMGI 494 A+GI Sbjct: 539 FALGI 543 >UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 RepID=DNLJ_MYCAP Length = 654 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 115/542 (21%), Positives = 240/542 (44%), Gaps = 76/542 (14%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQ----------------LSARLTQWQ 72 A+E I L ++I QW+ +Y++ K V D YD+ LS T Sbjct: 5 EAKELIKSLVEKINQWNYEYYQLNKPSVSDLEYDKALLELEKLEKEHPDLILSNSPTFRI 64 Query: 73 RCFGSE--PRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAV 130 F SE + V P+ ++ + + ++ N + E + ++PK+DG+++ Sbjct: 65 GSFASEKFTKFVYQKPM-LSLAKAYNYDDINSFIN-NISKIVPTENINFNIEPKIDGLSI 122 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH-- 188 L Y+ GKL KA +RG+G +GED T+ + I ++P+ ++ + ++GE+F+ + Sbjct: 123 ALRYKQGKLVKAATRGDGSEGEDVTENIYQIKSIPKLINY-FNDLEVRGEVFITKNDFKK 181 Query: 189 IQQQMGGINARAKVAGLMMRQDDSDTL--NSLGVFVWAWPD----GPQLMSDRLK----- 237 I + NAR +G +RQ D++ + +L F++ + G + L+ Sbjct: 182 INESNNFANARNAASG-TLRQLDANIVAERNLSAFLYEIVEPEKHGIYYQHEALEFMKNL 240 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHW----- 292 + T F+ ++ + A ++N +L + DG+V++ + + W Sbjct: 241 DFPTNPFSKVVEIEELEESISDFAEIKN-----KLDYDADGLVIKLN---DLQMWDKLGK 292 Query: 293 ---LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 P + +A+KY + + I +VG++GKI+ +A++ PV+L+ V+ + Sbjct: 293 TSKFPKHS---IAFKYDVEVASSRITDILTSVGRTGKITYIANILPVLLNQTTVKAATLH 349 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC------- 402 + ++ +I D++ + AG+ IP+ V+ E+ + N +C Sbjct: 350 NHNFIKDMNININDEVNIIKAGEIIPK---VISLKEEKNYVDYYKKATNCPSCGSQLVEF 406 Query: 403 ------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ--THRFEHIFSWLLL 454 + +D C ++ I+ + ++ L + G+G + + + + IF Sbjct: 407 EGIVDQFCTNDECPDKNINNIYHFASRNCLNIVGLGLSTVKDFYPKFIKNIKDIFDLHKY 466 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT--RAA-LNASDERSWSQ 511 E ++ P K + + A+ + F++ + A+GI RAA L A + ++++ Sbjct: 467 RAELIK-LPRYRDLKVDNILNSIESAKNKKFSKVIFALGIKHIGQRAAKLIADNYANFAE 525 Query: 512 LL 513 LL Sbjct: 526 LL 527 >UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGZ2_LIBAP Length = 731 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 126/593 (21%), Positives = 234/593 (39%), Gaps = 112/593 (18%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR-DV 82 A S +A++E+S L+Q+I DD Y++ K + D YD L R F R + Sbjct: 11 ALSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSED 70 Query: 83 MMPPLN--GAVMH----PVAHT-------------GVRKMVDKNALSLWMRERSD---LW 120 PLN G M+ V H+ +RK + + W ++ + Sbjct: 71 PNGPLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITR-IYRFWQKKDDNSIFFT 129 Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST-LQG 179 ++PK+DG +T+ Y GK A RG+G GED + + I +P+ +S + ++G Sbjct: 130 LEPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRG 189 Query: 180 EIFLQREGH--IQQQMGGI------NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQL 231 E+++ + + +M + N R +G++ R + +D L FV ++ Sbjct: 190 EVYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDITRYLNFFVHGLGKTSEI 249 Query: 232 MS----DRLKELATAGFTLT------QTYTRAVKNADEVARVRNEWWKAELPFVTDGVVV 281 + + L+++ GF + T+ V +E+ +R + LP+ DG+V Sbjct: 250 FAKGQYEMLQKMRCLGFPVNNGVRQANTFHGIVSYYNEMKSIR-----STLPYDIDGLVY 304 Query: 282 RA-----AKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPV 336 + K+ R P W+++ K+ + I +G++G ++ VA L PV Sbjct: 305 KVDEFSLQKQLGERARSP---RWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPV 361 Query: 337 MLDDKKVQRVNI------------GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRG 384 + + + G V R DI GD++LV AG+ IP++ D++ Sbjct: 362 NIGGALITNATLHNEDYIKGLDASGKVMRGGR-DIRVGDRVLVKRAGEVIPKVVDIIVN- 419 Query: 385 AERTKPTPPENRFNSLTCYFASDV----------------------CQEQFISRLVWLGA 422 ER P + F S S V C Q + RL + Sbjct: 420 -ERHPDAQPFS-FPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVS 477 Query: 423 KQVLGLDGIGEAGWRALHQTHRFEHIFSWLL------------LTPEQLQNTPGIAKSKS 470 + ++G+G+ ++ + FS + + +++N G Sbjct: 478 RDAFNIEGLGKQQLDFFFKSE--DPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSV 535 Query: 471 AQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQL 523 L+ N R R++ ++GI + A RS ++ S + F Q++ Sbjct: 536 TNLYDSINKRRNISLERFIFSLGI----RHVGAEIARSLAKYYLSYQNFAQEI 584 >UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Moritella sp. PE36 RepID=A6FGB3_9GAMM Length = 413 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 104/389 (26%), Positives = 170/389 (43%), Gaps = 51/389 (13%) Query: 22 CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD 81 CP+ Q IS L+ QI + Y+ + DG +D L LT C Sbjct: 44 CPS---VLNQHRISYLETQIIKHRRIYYAGQTPLLHDGEFDLLVDELTVLSHCLSP---- 96 Query: 82 VMMPPLNGAVMHPVAHTGVRKMVDKNALSL-WMRERS------------DLWVQPKVDGV 128 V+ G + H R+ + LSL +RER+ L +QPK DG+ Sbjct: 97 VLTQIGGGNLQHNDTRQRDRQPHRQQMLSLNSVRERTAVDKFYQLHQDQQLLIQPKFDGM 156 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 A+ LVY G L A SRG+G +G+D + +AV ++ P + GE+++ G Sbjct: 157 AIELVYEKGMLVGASSRGDGKQGKDLLALMLRSNAVNSMIAYPYT-LVIHGELYV---GQ 212 Query: 189 IQQQMGG--INARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDGP---QLMSDRLKELATA 242 Q+ G +++R AG+ + + T + SL W W D P +LM L +LA Sbjct: 213 QDWQLRGKYVSSRHMTAGIASQLSPAQTDVMSLRFMPWRWIDSPYNNELMG--LAQLAML 270 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWWKAEL----PFVTDGVVVRAAKEPESRHWLPGQA- 297 GF + + ++ ++W A F+ DG+V++ A R + Q Sbjct: 271 GFADMSKMSHVIDRPQDI-----DYWLAHYQNTEAFLLDGIVLKLANNTLQRQYGHTQHA 325 Query: 298 -EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A K+ ++ V I + VGKSG+++ + + P+ L ++V RV+ R Q Sbjct: 326 PRWALALKFTGPKGLSNVIDITYQVGKSGRVTPIIHVQPLALSGRQVTRVS----GRSQP 381 Query: 357 W----DIAPGDQILVSLAGQGIPRIDDVV 381 W I G Q+ + L G P++ +V Sbjct: 382 WLLQSKIEVGSQVEIELVGNATPQLTRLV 410 >UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN Length = 727 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 142/579 (24%), Positives = 234/579 (40%), Gaps = 77/579 (13%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP--RDVMM 84 PA +E + L +Q++ Y+ + DG +D+L T+ Q P RD Sbjct: 40 PAGVRERYADLVEQVRAHQFRYYVLDSPTISDGEFDEL---FTELQTLESDHPALRDPDS 96 Query: 85 PP--LNG-------AVMHPVAHTGVRKMVDKNALSLWMR--ER-----SDLWVQPKVDGV 128 P + G AV H + D + L W+ ER + + K+DG+ Sbjct: 97 PTQVVGGTFSTDFTAVDHLERMLSLDNAFDPDELRAWVERVEREVGSSAHYLCELKIDGL 156 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----PL-ANSTLQGEIFL 183 A+ L+YRDGKL +A++RG+G GED T V + VP ++G P+ A ++GE+F Sbjct: 157 AINLLYRDGKLERALTRGDGRTGEDVTLNVRTMDDVPDQLTGTDEYPVPALVEIRGEVFF 216 Query: 184 QREGHIQQQMGGI--------NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG------P 229 + + Q + N R AG +RQ D S + + G P Sbjct: 217 RVDEFAQLNASLVEAGKPPFANPRNSAAG-SLRQKDPRVTKSRPLRMICHGLGKREGFEP 275 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA--ELPFVTDGVVVRAAKEP 287 + S+ L G ++ +T+ + DEV + W K DGVVV+ + Sbjct: 276 KQQSESYAALRAWGLRVS-PHTKVLSTVDEVLEHIDYWGKHRNSAEHEIDGVVVKVDEVS 334 Query: 288 ESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 R W +A+KY P + IQ AVG++G+++ A + PV + V R Sbjct: 335 LQRRLGATSRAPRWSIAYKYPPEQATTRLLDIQVAVGRTGRVTPYAVMEPVKVAGSTVAR 394 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPR-----IDDVVWRGAER--TKPTPPENRFN 398 + + + + + GD++++ AG IP +D V G+ER PT + Sbjct: 395 ATLHNADQVRHKGVLIGDRVVIRKAGDVIPEVLGPVVD--VRDGSEREFVMPTECPDCGT 452 Query: 399 SLTCYFASDV---------CQEQFISRLVWLGAKQVLGLDGIGEAGWRAL-------HQT 442 +L DV C Q RL L ++ ++ +G G AL + Sbjct: 453 ALAHQKEGDVDLRCPNSHNCIGQRRERLFQLAGRKAFDIEVLGYEGVSALLSAGVVFDEG 512 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI----PLTR 498 F+ + LL + G +L A++QP R ++A+ I P+ Sbjct: 513 DLFD-LNEEALLKTTLFRTDDGSLSVNGGKLLANLESAKQQPLWRVLVALSIRHVGPIAA 571 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 L A + S ++ ++E+ G G A V EW Sbjct: 572 RVL-AREFGSLDRIQEASEEELAAGEGVGPTIATAVREW 609 >UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F129_9PROT Length = 670 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 137/585 (23%), Positives = 230/585 (39%), Gaps = 66/585 (11%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQ-------------RCFGSEPR 80 I L+ Q+++ + Y+ + D YD+L L + R G+ P Sbjct: 11 IEHLRSQLREHNYRYYILDAPVISDAEYDRLLRELESLEAELGEPVPADSPTRTVGAPPS 70 Query: 81 DVMMPPLNGAVMHPVAHT----GVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRD 136 V +G + +A+ V V + +L S V+PKVDG+AV L Y Sbjct: 71 QVFTTRTHGEALLSLANAFSAGEVEAFVRRIGETLPATTLS-FIVEPKVDGLAVNLRYEQ 129 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVP---QTVSGPLANSTLQ--GEIFLQREG---- 187 G L A +RG+G GED T V I +P + V G + L+ GEI++ RE Sbjct: 130 GSLTIAATRGDGTTGEDVTDNVRTIGDIPWQLKQVDGIELPTVLEVRGEIYMSREAFAAL 189 Query: 188 HIQQQMGG----INARAKVAGLMMRQDDSDTLNS--LGVFVWAWPDGPQLM----SDRLK 237 + +Q G N R AG +RQ D+ S LG F + G + + S L+ Sbjct: 190 NARQDAEGAQPFANPRNAAAG-SLRQLDARVTASRRLGFFAYGAGLGGRAIASSQSQLLE 248 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW-----WKAELPFVTDGVVVRAAKEP--ESR 290 LA GF + +T AD++ + + + ++P+ DGVV + + + Sbjct: 249 RLAGFGFAVQKTAC-----ADDLEGLLATYQQLQQQRPDMPYEIDGVVYKLDEFALQDRM 303 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 + W +A K+ VK I + VG++G I+ VA + PV + V R + + Sbjct: 304 GAVARSPRWAIAHKFPAEEVTTTVKDIIWQVGRTGVITPVADMEPVAVGGVVVSRATLHN 363 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPEN---------RFNSLT 401 + + + G +++V AG IP + V A+ P P R Sbjct: 364 IDELKRKQVYAGARVIVRRAGDVIPEVVRAVDVDAQAMMPKAPAQCPVCGASLFRLEGEV 423 Query: 402 CYFASD--VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 S C Q RL ++ + ++G+G+ L I L Sbjct: 424 AIRCSGGLSCSAQLTERLRHFVSRGAMDIEGMGDKLIARLVDEGCLNDIADLYEFDYASL 483 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI----PLTRAALNASDERSWSQLLFS 515 G+ + K L ++++P R++ A+GI T AAL A+ L+ + Sbjct: 484 HEWQGMGEKKITNLQLSIERSKQRPLARFLHALGIRHVGSATAAAL-ATHFADLELLMQA 542 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 E+ +P G A ++ + + + L A +T P Sbjct: 543 DEEALLAVPDVGPEVAGSILSFFREQHNRDVIDRLLAAGVTPEAP 587 >UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DNLJ_MYCPE Length = 701 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 110/575 (19%), Positives = 244/575 (42%), Gaps = 78/575 (13%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDV--MMP 85 I L++ + Q++ +Y+ V D YD L Q + + S + V + Sbjct: 26 IQNLRKNLNQYNYEYYGLENPSVSDYEYDMCLKELIQLETQYPEFDSPNSPSKKVGGYIS 85 Query: 86 PLNGAVMHPVAHTGVRKMVDKNALSLWMRE------RSDL--WVQPKVDGVAVTLVYRDG 137 V H + + D+ L + + SD V+PK+DG+++++ Y+DG Sbjct: 86 EKFNKVKHEIPMMSLSNAFDEEDLLKFDNDIKKAIGSSDFSYVVEPKIDGLSISVKYKDG 145 Query: 138 KLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG--------HI 189 L +A++RG+G GED TQ + I ++P + + ++GE+FL ++ ++ Sbjct: 146 NLIQAVTRGDGEIGEDVTQNIKTIKSLPLNIEYD-KDLEIRGEVFLTKKDFEKINSDPNL 204 Query: 190 QQQMGGINARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQLMSDRLKELATAGFTLTQ 248 ++ NAR +G + D + T +L + P +L + ++ + Sbjct: 205 TKKFA--NARNAASGSLRNLDSNITAKRNLSALFYYVPKATELKIAKQYDVLSWLDKQLI 262 Query: 249 TYTRAVKNADEVARVRNEW-----WKAELPFVTDGVVVRAA--KEPESRHWLPGQAEWLV 301 +R +++ + + V + + + DG+V++ E + +W + Sbjct: 263 PISREIRHCNNIQGVIERISELTDTRDQFKYDIDGIVIKVNDFNHYEEIGYTSKFPKWAI 322 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 A+K+ V + ++ +I VG++G+I+ +A+L ++L+ +V++ + + ++ +I Sbjct: 323 AYKFPAVVKQTKLNSIDVTVGRTGRINYIANLDEILLEGSQVKKATLHNYDYIKDHEIML 382 Query: 362 GDQILVSLAGQGIPRIDDVVWR---GAERTKPTPPENRFNSLTC-------------YFA 405 D + + AG+ IP+I + G++ P P N +C Y Sbjct: 383 NDIVEIYKAGEIIPKIIRSIKEKRDGSQVVFPEPT----NCPSCDSKLVKKEQEVDLYCL 438 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT---------HRFEHIFSWLLLTP 456 ++ C E+ I ++ + ++ + ++G+ + L + + H L+ T Sbjct: 439 NENCVEKQIQQIEYFSSRDAMNIEGLSISIISQLFRNKIINDAIDLYELAHKKEILIATK 498 Query: 457 EQL--QNTPG--------IAKSKS-AQLWHQFNLARKQPFTRWVMAMGIPLT--RAALNA 503 ++ +N G + K KS + ++ +++ +GI RAA Sbjct: 499 QKFYRKNDDGTKTEFERSLFKDKSFTNIIEAIEKSKSNSMEKFLTGLGIKYVGLRAAKAL 558 Query: 504 SDE-RSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 S +S +L +T + +Q+P TG + ++ W Sbjct: 559 SKRFKSIEELAMATREEIEQVPDTGEKMSESLVNW 593 >UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7C8A9_9FIRM Length = 667 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 114/514 (22%), Positives = 218/514 (42%), Gaps = 63/514 (12%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP------- 86 I L+++++++ +Y+ + D YD+L L + + E D P Sbjct: 10 ILELRKELEKYSIEYYVYDNPSITDQEYDRLMQELMALEEKY-PEMYDATSPSQRIIGSV 68 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGVAVTLVYRDGK 138 L+G V H + + +K + +++ S+ V+ K DG+A+ L+Y DG Sbjct: 69 LDGFEKVTHDTQMLSLSNVFNKEEIEEFVQRISESVSNPEFVVECKYDGLAMALLYDDGN 128 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ----QQMG 194 +A++RG+G+ GED + V I ++P + + + ++GE+++ + Q Q+ Sbjct: 129 FTRAVTRGDGIVGEDVSNNVKTILSIPMHIP-EMRHVEVRGEVYMPKASFEQLNKRQEEK 187 Query: 195 GI----NARAKVAGLMMRQDDSDTLNSLGV------FVWAWPDGPQLMSDRLKELATAGF 244 G+ N R AG +RQ DS S + F A Q + L+ ++ F Sbjct: 188 GLAPFANPRNAAAG-SIRQLDSSICASRKLDAYWYYFQNASDFAVQTQEEALQAMSKMHF 246 Query: 245 TLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPESRHWLPGQAE---W 299 T + +++ + E + +LP+ DG+V++ + R L A+ + Sbjct: 247 R-TNPLRKVCTTVEQIWQFIQEIQEKREDLPYEIDGMVIKLNNLADQRR-LGSTAKVPRY 304 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 A+K+ + +K I VG++GKI+ A L PV + V + + D+ Sbjct: 305 ATAYKFPAQEVLTRLKDIVITVGRTGKITPNAVLEPVRVAGTTVSAAQLHNEDMIVNKDL 364 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC----------------Y 403 GD ++V AG+ IP +VV ER T +F + TC Y Sbjct: 365 RIGDIVVVRKAGEIIP---EVVTSVPERRDGTQVPYKFPT-TCPICGSHLVRLPDEAAHY 420 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ---THRFEHIFSWLLLTPEQLQ 460 + C + + ++ ++ + +D +G+ LH+ + E I+ +L ++L Sbjct: 421 CINQDCPARVVESMIHFASRDAMNIDTLGDKKIEQLHEWGYLNSIEDIY-FLDRYYDELI 479 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 PG K +L ++KQP + +GI Sbjct: 480 EKPGYQKKSVDKLLESIEKSKKQPLGVILYGLGI 513 >UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM Length = 670 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 102/441 (23%), Positives = 189/441 (42%), Gaps = 46/441 (10%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNG 89 A++EI L +++ + + Y+++ E+ D YD + R + + + P + P + G Sbjct: 3 AKKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKDR---YLKLLEANP-SLGFPVVVG 58 Query: 90 --------AVMHPVAHTGVRKM---------VDKNALSLWMRERSDLWVQPKVDGVAVTL 132 V H +R + ++K L ++ + +PK+DGV+ + Sbjct: 59 YPASEKFQKVKHLSPMLSLRNIFSEEELVEYIEKTKRFLNLKSALEFLCEPKIDGVSFSA 118 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 Y +GKL +RG+G GE+ + +I+ P + ++GE+FL + Q Sbjct: 119 RYVNGKLVSCATRGDGKIGENIIDNMKVINGFPIEIMDVPDLLEVRGEVFLDHDT-FQTL 177 Query: 193 MGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWP----DGPQLMSDRLKELATAGFTLTQ 248 G N R AG +RQ + + N + +A+ DG + D L L+ GF +T Sbjct: 178 EGFSNPRNAAAG-SLRQLNPEITNERNLQYFAYSASKIDGIEHQEDVLHFLSGRGF-MTN 235 Query: 249 TYTRAVKNADEVARVRNEWWK--AELPFVTDGVV--VRAAKEPESRHWLPGQAEWLVAWK 304 A E+ + ++ +++ + DG+V V K L W +A K Sbjct: 236 PLRLASSKVPEIMSFYDSVYRRRSQIKYDIDGLVYKVNDLKLHARLGTLSDAPRWAIAHK 295 Query: 305 YQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQ 364 + ++ I+ +VG++G I+ VA L P+ + + R ++ + + DI GD Sbjct: 296 FPSHRAKTILEKIKLSVGRTGIITPVAHLKPITIGGVVISRASLYNEDELERKDIREGDL 355 Query: 365 ILVSLAGQGIPRI--DDVVWRGAERTKPTPP-----------ENRFNSLTCYFASDVCQE 411 ++V AG IP++ D+ +R + P +N + C S C E Sbjct: 356 VIVERAGDVIPKVLEVDISYRTNQERFIFPDKCPSCSSTLIRKNNEAATRCN-NSKKCPE 414 Query: 412 QFISRLVWLGAKQVLGLDGIG 432 Q I ++ L + Q +DGIG Sbjct: 415 QVIQQIKHLVSAQAFDIDGIG 435 >UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8W2_9FIRM Length = 675 Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 105/396 (26%), Positives = 174/396 (43%), Gaps = 56/396 (14%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARL--------------TQWQRCFGS 77 E L QI D Y+ + K+E+ D YDQL +L + Q+ G+ Sbjct: 4 ETYQELIDQINYHMDLYYNQDKTEISDYEYDQLMQQLKAAEAEHPDWVRPDSPSQKIGGT 63 Query: 78 EPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW------VQPKVDGVAVT 131 R+ + V H V + + D ++ W+++ ++ V+ K+DG+++T Sbjct: 64 TKREAGV-----KVEHNVPMLSIEDVFDFQSVIDWVKKVQEMHPDAIFSVEQKIDGLSMT 118 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQR---E 186 L YR G+L A +RG+G GED TQ I VP + P+ + L+ GE+++ R E Sbjct: 119 LRYRKGRLELAETRGDGHIGEDVTQNARAIPQVPDKL--PITDPYLELRGEVYMTRDRFE 176 Query: 187 GHIQQQMG-----GINARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDG-PQLMS---DRL 236 + +Q N R AG + + D T L +F++ DG P M D L Sbjct: 177 AYNARQEKDEKPLAANPRNLAAGTLRQLDPGITAKRGLALFIFNVQDGEPHFMRSQLDNL 236 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEWWKA--ELPFVTDGVVVRAAKEPESRHWLP 294 L+ G + TY + NA EV E K +L + DG VV+ + R P Sbjct: 237 DRLSAMGLPV--TYHKRADNAKEVIAAIEEIGKMRDQLGYDIDGAVVK-IDQIAYRKDFP 293 Query: 295 GQAEW---LVAWKYQPVAQVAEVKAIQFAVGKSGKISV------VASLAPVMLDDKKVQR 345 A++ +A+KY P +V E+ I VG++GK++ V + P L V R Sbjct: 294 AGAKYSAGHIAYKYPPEERVVEMDQILVDVGRTGKLTFTGQFHDVKTGGPARLCGTSVSR 353 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV 381 + + ++ I G + +G+ IP+++ V Sbjct: 354 ATLHNQDYIRQMKIGIGGHYKLFKSGEIIPKLNGCV 389 >UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE Length = 659 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 99/464 (21%), Positives = 195/464 (42%), Gaps = 72/464 (15%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQW--------------QRCFGSE 78 +I +L IK +D Y+ + ++D YD L L Q QR G Sbjct: 7 KIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQRVGGEA 66 Query: 79 PRDVMMPPLNGAVM---HPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYR 135 + N ++ + + + +D ++ +++ V+PK+DGV+++L Y+ Sbjct: 67 VKGFKKLNHNSPMLSLENAFSTKEIANFIDN--INFQTNSKNEFVVEPKIDGVSISLTYK 124 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST-LQGEIFLQREGHI----Q 190 +G L A++RG+G GED V I ++P T+ P + ++GEIF+ ++ + Q Sbjct: 125 NGVLVHALTRGDGSVGEDVLNNVKTIKSIPLTI--PFTKTIEIRGEIFVDKKTFLAINNQ 182 Query: 191 QQMGGINARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDG------PQLMSDRLKELATAG 243 + NAR AG + + T L + P+G Q M L++L Sbjct: 183 LEKPFANARNLAAGTIRNLNSEITAQRKLRALFYYIPNGLEESITTQTMV--LEQLKQWK 240 Query: 244 FTLTQTYTRAVKNADEVARVRNEWWKA--ELPFVTDGVVVR------------AAKEPES 289 F ++ T R +N ++ + K +L F DG+V++ +K P Sbjct: 241 FPVSDT-IRVFQNKFQLINYLEAFDKKREQLTFNLDGLVIKLNSLLFYQQLGATSKSP-- 297 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A+K+ P ++ A+ +G++G+++ A L V LD KV + Sbjct: 298 --------RWAIAFKFSPKFVQTKLTAVLITIGRTGRVNYTAKLESVNLDGTKVTAATLH 349 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRF------------ 397 + + DI D +++ AG+ IP++ V + E ++ Sbjct: 350 NFDYIKTKDIRINDTVVIYKAGEIIPKVLKVNLEKRKNDTIIIQEQKYCPSCNSKLVKIV 409 Query: 398 NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 + + Y ++ C+E+ I + + +K + ++G+ L++ Sbjct: 410 DEVDQYCTNETCKERNIQLINYFVSKTAMDINGLNINTITKLYE 453 >UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia floridanus RepID=DNLJ_BLOFL Length = 594 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 126/567 (22%), Positives = 245/567 (43%), Gaps = 70/567 (12%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF---------GSEPRDVMMPPL 87 L++++ + Y+ + +S+V D YD L L Q + + +V L Sbjct: 11 LRERLNYLEYLYYVKSESKVSDEEYDILLEELRQLEFKYPYLITKSSSTQSISNVCDNSL 70 Query: 88 NGAVMHPVAHTGVRKMVDKNALSLWMRE-----------RSDLWV---QPKVDGVAVTLV 133 N + H + + DK+ L L+ + +L V + K+DGVA++++ Sbjct: 71 N-RIRHQKPMLSLNSIRDKSQLLLFDKRIKYKLSNHYNINQNLIVYCCELKIDGVALSIL 129 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL------QGEIFLQREG 187 Y+ GKL A +RG+G GE+ T+ V+ I ++P+ + N L +GEIF+ + Sbjct: 130 YKQGKLVHAATRGDGKIGENVTKNVNAIDSIPKNLKKN-NNEILPDLLEIRGEIFISKLS 188 Query: 188 H--IQQQMGGI------NARAKVAGLMMRQDDSDT-LNSLGVFVW--AWPDGPQLMSD-- 234 + Q+M NAR +G + + D T L SL + ++ G + + + Sbjct: 189 FSKLNQEMLSSGKKVFSNARNAASGSLRQLDPHVTELRSLVFCCYGISYYAGLKQLPNSH 248 Query: 235 --RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWK--AELPFVTDGVVVRAAKEPESR 290 RLK G ++ Y + V D V N K +EL + DG+V++ Sbjct: 249 WGRLKLCNRWGLSIN-NYIQIVSGIDPVLEYYNYVRKIRSELEYQIDGIVIKIDNCIYQD 307 Query: 291 HWLPG--QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 G W VA+K+ ++ ++ + F VG++G I+ +A + PV++ + +++VN+ Sbjct: 308 QLGCGFRAPNWAVAYKFPAELKLTKLNDVVFKVGRTGLITPIAYINPVVIGNVIIKKVNM 367 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR----GAERTK-----PTP------P 393 +V + ++ GD ++V +G IP+I ++ A+ K P+ Sbjct: 368 HNVNEVKRLNLMIGDTVIVQRSGDVIPKILKIILENRVDNAKFIKIPEFCPSCGSILKVE 427 Query: 394 ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 +N+ + L C A C Q S L +++ + + G+G L + Sbjct: 428 DNKSSVLRC-LAKLTCLAQRKSALKHFASRKAMNIQGMGSRVINQLVDKGLICTPVDFFS 486 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALN---ASDERSWS 510 L+ E+L + + +L +A++ + ++ A+GIP +++ A R+ Sbjct: 487 LSKEKLLCLDRYGEKSAERLLQSILIAKEITLSAFIYALGIPGVGESVSNKLAYMYRTIE 546 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEW 537 L+ + Q + QL G A + + Sbjct: 547 NLMNADLQSFLQLKFIGKIAAMNIYSF 573 >UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C9H9_MICLC Length = 797 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 102/399 (25%), Positives = 169/399 (42%), Gaps = 61/399 (15%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-------------GS 77 +EE L ++++ Y++ E+ D YD L RL + G Sbjct: 22 REEYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPELVSNDSPTQEVGG 81 Query: 78 EPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW------------VQPKV 125 E + P +GA M+ + + L +W R + V+ K+ Sbjct: 82 EVSEAFAPVRHGARMY-----SLEDVFSVEELEVWFRRAAQALTQVRPGVAPRWLVEVKI 136 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFL 183 DG+AV L YRDG+L +A +RG+G+ GED T V I +P +SG A ++GE+F+ Sbjct: 137 DGLAVALRYRDGRLVQAATRGDGVTGEDVTANVRTIGDIPHELSGEGWPAEFEVRGEVFM 196 Query: 184 QREGHI--------QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQ 230 + Q N R AG + ++D + T L +FV G + Sbjct: 197 SSAAFAELNARRAEEGQPPFANPRNAAAGALRQKDPAVTAQRPLAMFVHGIGSVEAFGLE 256 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADE-----VARVRNEWW--KAELPFVTDGVVVRA 283 + LA+ G ++ YTR V+ ADE V V E+ + EL DG+V++A Sbjct: 257 SQHEAYDALASWGLPVS-PYTRRVEGADEEALAAVVAVIEEYGRRRHELIHEIDGIVLKA 315 Query: 284 AKEPESRHW-----LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVML 338 + R+ +P W A+KY P ++ I +VG++G+++ A L PV + Sbjct: 316 DAFADQRYLGHTSRVP---RWAAAYKYPPEEVHTLLRDIAVSVGRTGRVTPFAVLEPVTV 372 Query: 339 DDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 V + + + + GD ++V AG IP + Sbjct: 373 AGSTVSLATLHNQDVVKAKGVLIGDTVVVRKAGDVIPEV 411 >UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=DNLJ_PARUW Length = 665 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 126/582 (21%), Positives = 237/582 (40%), Gaps = 92/582 (15%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-----EPRDVMM 84 Q++ +L +I + Y+ E + + D +D L +L + +R P + Sbjct: 3 TQKDYEKLCHEIWHHNKLYYIEHQPIISDEEFDALLKKLEEIERSHPEWITEFSPSQRVN 62 Query: 85 PPLNGAV--------MHPVAHTGVRKMVD---KNALSLWMRERSDLWVQPKVDGVAVTLV 133 L M +A+T ++ ++ K L + + + V+ K+DG+A+T + Sbjct: 63 ESLTSGFKTVAHRTPMLSLANTYSKEEIEDFIKRLQKLVGKRQVEFSVELKMDGIAITAI 122 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREGHIQ- 190 Y G + I+RGNG +G+D T + +I +P +SG L+ GE+F+ R+ +Q Sbjct: 123 YEQGIFKRGITRGNGKRGDDITTNMRMIENLPLQLSGENLPDFLEIRGEVFMPRQVFLQL 182 Query: 191 ----QQMGGI---NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAG 243 Q G + N R AG + D P+++++R LA Sbjct: 183 NEQKLQDGEVLWANPRNAAAGSLKLLD------------------PKMVAER--RLAVVF 222 Query: 244 FTLTQTYTRAVKNADEVA------------------RVRNEWWKAE--------LPFVTD 277 + L + + ++K EV + W AE LP+ D Sbjct: 223 YGLAEDSSASIKKQAEVPSFFRSIGLPALEHHAYCQNIEQIWKFAEEIRSLRTILPYDID 282 Query: 278 GVVVRAAK-EPESRHWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 G+V++ + + R + G++ W +A+K+ + I +G++G ++ VA L P Sbjct: 283 GIVIKLNDFKDQKRLGVTGKSPRWAIAYKFAAEQAKTRIIDITVQIGRTGVLTPVAELEP 342 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKP---- 390 + L + R ++ + Q DI GD + + G IP++ +V + + ++P Sbjct: 343 IFLSGSTIARASLYNQEEVQRKDIRIGDLVTIEKGGDVIPKVLNVELSQRPLHSQPWQMP 402 Query: 391 -------TPPENRFNSLTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 T N + + D C EQ I +L++ KQ + + +GE L Q Sbjct: 403 LYCPSCGTQVINIIGEVAVRCPNEDSCTEQQIRKLIYFVGKQAMDIKHMGEKIVIQLFQK 462 Query: 443 HRFEHIFSWLL-LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP---LTR 498 F H+ S + LT Q+ L ++ R++MA+ I + Sbjct: 463 G-FIHLPSDIFALTEGQISQLTNFKTKAIQNLMRSIEESKHVSLERFIMALEIKYIGIGT 521 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN 540 A L A+ + L+ E+ ++ G G A+ V+E +N Sbjct: 522 AELLAARAGTIETLMQLNEEDLIKIEGVGGKVAQAVVEHFQN 563 >UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=A6GU16_9BURK Length = 597 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 123/522 (23%), Positives = 220/522 (42%), Gaps = 70/522 (13%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDVMMPPL 87 + RL + +W+ Y+ EV D YD++ L Q + S + V P Sbjct: 27 MRRLIDLLNRWEYAYYVLDAPEVPDSEYDKVYRSLQQIENNHPELIQNDSPTQRVGGKPA 86 Query: 88 NG--AVMHPVAHTGVRKMVDKN---ALSLWMRERSDL--------WVQPKVDGVAVTLVY 134 +G V H V + + + A ++E +DL V PK DG+A+++ Y Sbjct: 87 DGFEQVRHRVPMLSLGNAFEDSDVLAFDRRVKELADLPIDTTIAYAVDPKFDGLAISIHY 146 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL--ANSTLQGEIFLQREGHIQ-- 190 +G ++AI+RG+G GED + V I ++P + G + A+ ++GEIF+ ++ +Q Sbjct: 147 TNGMFDQAITRGDGTVGEDVSANVKTIRSLPLKLKGSVVPAHLEIRGEIFMTKKDFLQMN 206 Query: 191 --QQMGGI----NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKE------ 238 Q G+ N R AG +RQ D S + + + G L ++L+E Sbjct: 207 QRQAELGLKVFANPRNAAAG-TIRQLDPKVAASRPLRFYCY--GAALEREQLRELKSQSA 263 Query: 239 ----LATAGFTLTQTYTRAVKNADEVARVRNEWW-KAELPFVTDGVV--VRAAKEPESRH 291 LA G +++ A ++ R+ ++ LPF DGVV V + + Sbjct: 264 MMKWLAALGLPVSELSQTATGAEGLLSFYRSVGGRRSTLPFEIDGVVYKVDSFDLQDQLG 323 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 ++ + VA K+ P ++ + I+ VG++G I+ VA L PV + V + ++ Sbjct: 324 YVAKAPRFAVAHKFPPDEVLSRLLNIEVQVGRTGSITPVAKLEPVKVGGVVVSSATLHNL 383 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRF---------NSLT- 401 Q D+ GDQ+LV AG IP + + + G +R +P + F NSL Sbjct: 384 DEIQRKDLRVGDQVLVRRAGDVIPEV--LPFPGNQR---SPVSSAFVMPTHCPICNSLVR 438 Query: 402 ---------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 C VC+ Q ++ ++ + ++G+G L + Sbjct: 439 KEEGEAAFRCT-GGLVCKAQLTQSIIHFAHRRAIDIEGLGSKLVEVLVDKEWVKTPADLF 497 Query: 453 LLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 L + L + + L + A++ F R++ +GI Sbjct: 498 RLEFDALVQLERMGDKSARNLLDSIDKAKQTTFGRFLFGLGI 539 >UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P5_9ACTN Length = 742 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 127/582 (21%), Positives = 235/582 (40%), Gaps = 93/582 (15%) Query: 48 YWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP-----LNGAV---MHPVAHTG 99 Y+ E+ D +D++ L + Q + P D++ P + G V PV H Sbjct: 51 YYMLDAPEITDAAFDKM---LVELQEIEAAYP-DLVTPDSYTQRVGGYVSEQFTPVTHMA 106 Query: 100 ----VRKMVDKNALSLWMRERSDLW--------VQPKVDGVAVTLVYRDGKLNKAISRGN 147 + +D + L W++ D + K+DG+ V L Y++G +A +RG+ Sbjct: 107 RMYSMDDAMDLDELDAWLQRTEDALGAGNVTYTCELKIDGLGVALTYQNGTFVRAATRGD 166 Query: 148 GLKGEDWTQKVSLISAVPQTVSGPLANST---------LQGEIF--------LQREGHIQ 190 G GED + V I VP +S P ++GE++ L E + Sbjct: 167 GTTGEDVSLNVRTIKDVPMHLSEPALTHMGADRERTIEVRGEVYMPKGSFVRLNEEADAE 226 Query: 191 QQMGGINARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQLMSDRLKE----LATAGFT 245 + N R AG + ++D T L F++A D L +E L +AGF+ Sbjct: 227 GRDPFANPRNAAAGSLRQKDPKVTARRDLATFIYAIADTDPLHVHSQREFLDWLRSAGFS 286 Query: 246 LTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVR--AAKEPESRHWLPGQAEWLV 301 + R A EV + + +L + DGVVV+ + ++ + W + Sbjct: 287 VNPNVARCATPA-EVHEFCAQALEHRGDLDYDIDGVVVKVDSFQQQLDLGFTARAPRWAI 345 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 A+K+ P + ++ I+ VG++G ++ VA PV + + R + ++ + ++ Sbjct: 346 AFKFPPEEKQTVLREIRIQVGRTGVLTPVAEFDPVTVAGSTIARATLHNIDEIRRKNVRE 405 Query: 362 GDQILVSLAGQGIPRI----------DDVVWRGAERT----KPTPPENRFNSLTCYFASD 407 GD I+V AG IP + D V W+ E P E+ + C S Sbjct: 406 GDTIIVHKAGDVIPEVVGPVLDKRPADSVDWQMPEVCPVCGSPVVHEDGEVAYRC--VSI 463 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL-------- 459 C Q RL+ ++ + +DG+G+ + + + LT + + Sbjct: 464 DCPAQLKERLLHWVSRGCMDVDGLGDEIVDKMIAAGLIHDVADFYQLTVDDIAGLDTGRT 523 Query: 460 ----QNTPGIAKS-------KSAQ-LWHQFNLARKQPFTRWVMAMGI-PLTRAALNASDE 506 + G+ K K+A+ + + N ++ QP R + A+GI + ++ E Sbjct: 524 YASSNSKKGVKKGDPIPVGLKTAEKIIVELNKSKSQPLGRVLFALGIRHVGKSVGEVIAE 583 Query: 507 R--SWSQLLFSTEQFWQQLPGTG---SGRARQVIEWKENAQI 543 R S +L+ ++E+ + G G + +Q + EN + Sbjct: 584 RFLSIDKLILASEEDIAECEGIGPKIAASVKQFLAVPENLAV 625 >UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DNLJ_CITK8 Length = 671 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 119/525 (22%), Positives = 215/525 (40%), Gaps = 73/525 (13%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP----- 85 +++++ L+ ++ + Y E+ D YD+L L + + ++ D++ P Sbjct: 5 EQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELE----AQHPDLITPDSPSQ 60 Query: 86 -----PLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLW---------VQPKVDGVA 129 PL + H V + + D+ + + + D + K+DG+A Sbjct: 61 RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSGDKLTWCCELKLDGLA 120 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREG 187 V+++Y +G L A +RG+G GED T V I A+P + G + L+ GE+FL + G Sbjct: 121 VSILYENGVLISAATRGDGTTGEDITSNVRTIRAIPLKLRGDNIPARLEVRGEVFLPQAG 180 Query: 188 HIQ-----QQMGG---INARAKVAGLMMRQDDSD-------TLNSLGVFVWAWPDGPQLM 232 + ++ G N R AG +RQ D T GV + + P Sbjct: 181 FEKINEEARRTGNKVFANPRNAAAG-SLRQLDPRITAKRPLTFFCYGVGILEGGELPDTH 239 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE-----LPFVTDGVVVRAAKEP 287 RL + G ++ T D V + + K E L F DGVV++ Sbjct: 240 LGRLLQFKAWGLPVSDRVTLC----DSPEAVLDFYHKVEEDRPTLGFDIDGVVIKVNSMA 295 Query: 288 --ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 E ++ W VA+K+ Q+ V+ ++F VG++G I+ VA L PV + V Sbjct: 296 LQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSN 355 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFA 405 + + + + GD++++ AG IP++ +VV +ER + T P F + Sbjct: 356 ATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL--SERPEETRPVE-FPTHCPVCG 412 Query: 406 SDV----------------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 SDV C Q L +++ + +DG+G+ L + Sbjct: 413 SDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPA 472 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 LT +L + + + + A++ F R++ A+GI Sbjct: 473 DLFRLTAGKLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGI 517 >UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30ED5 Length = 684 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 105/414 (25%), Positives = 178/414 (42%), Gaps = 41/414 (9%) Query: 116 RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS 175 R + V+PKVDG+A++L Y +G L + ++RG+G GED T + I +PQ + G A Sbjct: 113 RFEYVVEPKVDGLAMSLHYENGTLIRGVTRGDGEIGEDVTHNIRTIEQIPQQIDGAPAWL 172 Query: 176 TLQGEIFLQREG----HIQQQMGG----INARAKVAGLMMRQDDSDTLNSLGVFVWAW-- 225 ++GE+++ ++++ G +N R AG +RQ DS + +W + Sbjct: 173 EVRGEVYMSLADFEALNLRRAEEGRSTFMNPRNSAAG-TIRQLDSRLAAERPLSMWCYGI 231 Query: 226 --PDGPQLMS--DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW---KAELPF-VTD 277 +G + + L+ L GF + R ++ A++V R E W + L F + Sbjct: 232 GETEGISFSTHWESLQWLRAHGFPVNDEIRR-IRTAEKVV-ARCERWQERRGSLDFEIDG 289 Query: 278 GVVVRAAKEPESRHWLPGQ-AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPV 336 VV E + R + G+ W +AWK+ P V ++ + + VGK G + A L PV Sbjct: 290 VVVKVDDVELQRRLGVVGRDPRWAIAWKFPPTTAVTQLHDVMWNVGKFGTLHPFAVLEPV 349 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK----PTP 392 + V+ + + D+ PGD ++V AG IP++ AER+ P P Sbjct: 350 HVGGVTVKLATLHNEEDLARKDVRPGDDVIVLRAGDVIPQVLSPAPHVAERSDRAPVPRP 409 Query: 393 PEN---------RFNSLTCYFASDVCQE---QFISRLVWLGAKQVLGLDGIGEAGWRALH 440 P + + + C Q + V GA V DGIGE L Sbjct: 410 PARCPVCDTPTVKGEGVFTKCPNRDCPGRRWQLLQHYVSRGAMDV---DGIGEKQVSVLM 466 Query: 441 QTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + + L+ EQL + + ++++PF R + +GI Sbjct: 467 EHGLLRTPGDYYRLSAEQLMQLDRFGEVSARNAVEAIAASKERPFGRVLFGLGI 520 >UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=DNLJ_MYCS5 Length = 697 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 104/495 (21%), Positives = 198/495 (40%), Gaps = 90/495 (18%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP 85 S + +E+I L +K + Y+ EV+D YD L L + + + P V+ Sbjct: 2 SNQQIKEKIISLNNYLKHLNHLYYDLDAPEVDDKTYDSLYNELLELEAKY---PSLVLED 58 Query: 86 PLNGAVMHPVAHTGVRKMVDKNALSL-WMRERSDLW------------------VQPKVD 126 + + V++ + +K LSL + S+++ ++PK+D Sbjct: 59 SVTKIIGAFVSNKFKKTKHNKEMLSLDKAYKESEIFSFYENFTQYKNLENFGFSLEPKID 118 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--GPLANSTLQGEIFLQ 184 G+++++ Y +GK KAI+RG+G GED ++ V I VP+ +S PL ++GEI+++ Sbjct: 119 GLSISIHYDNGKFIKAITRGDGTTGEDVSENVFQIRDVPKQISYLKPLE---VRGEIYMK 175 Query: 185 REG-----------HIQQQMGGI-------------------------NARAKVAGLMMR 208 + + Q + I NAR AG +R Sbjct: 176 KSTWKSLNEDIKNQYFQTNIEKIFSYMQALPKSKSWSNLKIKTPIFFKNARNAAAG-TLR 234 Query: 209 QDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYT-----RAVKNADEVARV 263 Q D + S + + L + ++ F Q + + KN E+ Sbjct: 235 QKDPKIVKSRNLSSLFYEIVSPLEHNLKTQMEVLAFLKEQNFEVNEFQKLAKNDQEIMFE 294 Query: 264 RNEW--WKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQF 319 NE+ K F DG V++ E + +W +A+KY ++ I Sbjct: 295 INEFSKIKNNFEFDCDGFVIKFNLIDKWEQIGFTSKFPKWAIAYKYMLEEANTKILNIVA 354 Query: 320 AVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDD 379 VG++G I+ +A PV L++ VQ + + ++ +I GD+I + +G+ IP++ Sbjct: 355 QVGRTGNITYIAQFMPVELNNTTVQNATLHNYEFIKKNNINIGDEITIIKSGEIIPKVIS 414 Query: 380 VVWRGAERTKPTPPENRFNSLTC-------------YFASDVCQEQFISRLVWLGAKQVL 426 + + + + E N +C + ++ C E+ I L + +K L Sbjct: 415 IYKKNTD----SVFEKVLNCPSCNSLLEIPEGYVDQFCRNENCDEKKIQMLTFFVSKNCL 470 Query: 427 GLDGIGEAGWRALHQ 441 + + R + Sbjct: 471 NITNLSVQNIRIFYN 485 >UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XES8_9HELI Length = 686 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 108/461 (23%), Positives = 191/461 (41%), Gaps = 51/461 (11%) Query: 119 LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST-L 177 + PK DG+++ L+Y +G L A +RG+G GE TQ + ++P T+ P S + Sbjct: 131 FCISPKYDGMSLNLLYENGILQSATTRGDGEIGEVVTQNAKTLHSLPHTI--PFKGSIEI 188 Query: 178 QGEIFLQREG----HIQQQMGG----INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGP 229 +GE+ L +E + +Q+ N R AG MRQ DS+ + AW G Sbjct: 189 RGEVVLSKENFARLNKEQERNNKALFANPRNAAAG-SMRQLDSNLTRERNLSFVAWGIGS 247 Query: 230 QLMS--------------DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA----- 270 M D L L GF+ + R NA+ + R E+ K Sbjct: 248 VDMKELEKYAKRSNLGFYDMLMLLPEFGFSPFRYLERV--NAESIER---EYQKILNDRD 302 Query: 271 ELPFVTDG-VVVRAAKEPESRHWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKIS 328 PF+ DG V+V + + +A + A+K+ V +++I VG++G I+ Sbjct: 303 NYPFMLDGFVIVLDDLALQDKLGFTQKAPRFACAYKFPATEVVINIESITPQVGRTGIIT 362 Query: 329 VVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAE 386 VA+ P LD + R + + + + DI D L+ +G IP+I V+ R + Sbjct: 363 PVANFKPTPLDGAFISRATLHNYKEIDQKDIRIRDYCLLVRSGDVIPKITKVLHERRKGD 422 Query: 387 RTKPTPP--------ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRA 438 K P E + + Y + C ++L+ +K+ + +DG+G + Sbjct: 423 EIKIAKPTHCPICSHELSYEDIYIYCTNPNCDAIIKAKLIHFASKKCMDIDGLGSSIIEL 482 Query: 439 LHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQF-NLARKQPFTRWVMAMGIPLT 497 L + L E G + K+ L + + + F R++ A+GI L Sbjct: 483 LVDNGVIKECKDIYSLKEEDFLRFEGFKEKKAQNLINAIKDSIENREFWRFIHALGI-LH 541 Query: 498 RAALNASDERSWSQLLFSTE-QFWQQLPGTGSGRARQVIEW 537 + + S+ +F + + Q++ G G A+ ++ Sbjct: 542 IGEVASKKLASYGYEIFDYDIEKLQEIEGFGKDMAQSFYDF 582 >UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNLJ_PARL1 Length = 710 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 139/603 (23%), Positives = 249/603 (41%), Gaps = 94/603 (15%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQL-------SARLTQWQR------CFG 76 A EE+ RL +I++ D Y+++ + D YD L AR + R G Sbjct: 25 APEELERLAAEIEKHDKLYYQKDAPRISDAEYDTLRRRNEAIEARYPELVREDSPSHRVG 84 Query: 77 SEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALS---------LWMRERSDLWV--QPKV 125 ++P D G V+H V + D + L ++E L + +PK+ Sbjct: 85 AQPADGF-----GKVVHKVPMLSLSNAFDDEDVRDFALRIRRFLNLKEEDILPITAEPKI 139 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFL 183 DG++ L Y GK +RG+G +GE+ T+ + I +P + G ++ GE+++ Sbjct: 140 DGLSAALRYEKGKFVMGATRGDGREGENVTENLKTIGDIPAELKGKNIPDVVEVRGEVYM 199 Query: 184 QRE-----GHIQQQMGG---INARAKVAGLMMRQDDSDTLNS--LGVFVWAWPDGPQLMS 233 E Q++ G N R AG +RQ D+ S L F + W + L + Sbjct: 200 SHEDFAALNERQREAGKPVFANPRNAAAG-SLRQLDAKITASRPLRFFAYTWGEMSDLPA 258 Query: 234 DRLKELATA----GFTLTQTYTRAVKNADEVARVRN-----EWWKAELPFVTDGVVVRAA 284 D + A GFT+ + R D V + + E +A L + DGVV + Sbjct: 259 DTQSGVMDAFRKWGFTVNPLFGRC----DTVEALIDFYHDIEERRATLGYDIDGVVYKVD 314 Query: 285 KEP-ESR-HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 + ++R ++ W +A K+ + ++ I+ VG++G ++ VA L PV + Sbjct: 315 RLDWQNRLGFVSRSPRWALAHKFPAEQAMTVLEKIEIQVGRTGALTPVARLTPVTVGGVV 374 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAER-----TKP---- 390 V + + + + PGD ++V AG IP+I VV RG ++ T P Sbjct: 375 VSNATLHNADEIERLGVRPGDTVVVQRAGDVIPQIVRVVEDRPRGKKKFVFPDTCPECGS 434 Query: 391 ------TPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ--- 441 P + +++ VC Q + RL ++ ++G+GE A + Sbjct: 435 HAVREVNPKTGKLDAVARCTGGLVCPAQAVERLRHFVSRNAFDIEGLGEKQIAAFFEDGL 494 Query: 442 THRFEHIFSWLLL---TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL-- 496 + + IF+ + ++L++ G + + +L+ + R+ R++ +GI Sbjct: 495 IKKPDDIFTLAARDAKSLKKLKDREGWGATSARKLFDAIDARREVELDRFIFGLGIRHVG 554 Query: 497 -TRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 T A L A RS+ L + F +Q+ R+ + E I +G LA + Sbjct: 555 ETNARLLA---RSYGTL----DHFEEQMRAAAD---REDEAYAELLSIDGVGEVLAESIV 604 Query: 556 TGF 558 F Sbjct: 605 DFF 607 >UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_MYCMO Length = 671 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 102/521 (19%), Positives = 223/521 (42%), Gaps = 68/521 (13%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDV 82 R E + L+ +I W+ Y+ + VED +YD +L +++ + S +++ Sbjct: 15 RIISEYNDLKNKINLWNKAYFDYDEPLVEDSIYDATLLKLIKFENQYKFLDNSDSPTKNI 74 Query: 83 --MMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDL------WVQPKVDGVAVTLVY 134 + V H + K + L ++ R + L +++ K+DG++++L Y Sbjct: 75 GAKVSKKFSKVQHQFPMLSLNKAYKFDDLKIFERHINKLGFFPNYFLELKIDGLSISLKY 134 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFLQR------- 185 +G L +A++RG+G+ GED T+ V I +P+ + S P+ ++GEI+L + Sbjct: 135 DNGNLIQALTRGDGISGEDVTENVFQIQDIPKQIKYSKPIE---IRGEIYLSKSTFYEIN 191 Query: 186 EGHIQQQMGGI-NARAKVAGLMMRQDDSDTLN--SLGVFVWAWPDGPQLMSDRLKELATA 242 E Q + N R +G +RQ DS + L F ++ + P + ++K Sbjct: 192 ECQKSQNLTIFANPRNAASG-SLRQLDSSIVKERKLNSFFYSVTN-P--LDHKIKNFNDQ 247 Query: 243 GFTLTQT---------YTRAVKNADEVAR-VRNEWWKAELPFVTDGVVVRAAKEPESRHW 292 L + + ++ A E + ++ +L + DG+VV+ + S + Sbjct: 248 ELFLKENNFQVPSLNKFVDTIEKAYEFIKDFEKNNYREKLNYEIDGIVVKV--DDFSLYD 305 Query: 293 LPGQAE----WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 + GQ ++A+K+ ++ ++ I +VG++GKI+ A L PV+++ V + Sbjct: 306 ILGQTSKFPRSMIAFKFSDISIETKLIDIFISVGRTGKITYNAILEPVIINGTLVSAATL 365 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE------------RTKPTPPENR 396 + + + D + + AG+ IP++ + + +E K PE+ Sbjct: 366 HNYEYVESLKLNKNDNVKIIKAGEIIPKVVSLSKKNSETIFKRIEYCTSCNEKLVQPEDE 425 Query: 397 FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ---THRFEHIFSWLL 453 + Y + C + ++ +K+ + + G+G + ++ +F +L Sbjct: 426 VDQ---YCINKKCLMIRLRKIEHFASKKAMNILGLGFQNIEKFFKLGILTKYSDLF-FLE 481 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 +++ P + L N ++ +++ A+GI Sbjct: 482 KYKNLIESQPSFGEKSFNNLIESINRSKSNSLEKFIFAIGI 522 >UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT Length = 668 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 122/560 (21%), Positives = 230/560 (41%), Gaps = 65/560 (11%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF--------------GSEP 79 I++L++Q+ W Y+ + V+D YD L + + G+ Sbjct: 10 INQLKEQLNLWSKQYYVDDNPSVDDTEYDLALKELISLENLYPEFITSDSPSQKVGGTVS 69 Query: 80 RDVM-----MPPLN-GAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLV 133 + P L+ G V + V K + +L ++ + K+DG++++LV Sbjct: 70 EKFLKITHKTPMLSLGNVFNFDEFLEFNTQVSKVSNNL----NNEYVAELKIDGLSISLV 125 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQR---EGHIQ 190 Y +G L A +RGNG+ GED T V I ++P +S ++GEI+L + E Q Sbjct: 126 YENGVLVSAATRGNGVIGEDVTTNVRTIKSIPLKISKK-ERVEVRGEIYLSKAEFEKINQ 184 Query: 191 QQMGG-----INARAKVAGLMMRQDDSDTLNS--LGVFVWAW--PDGPQL-MSDRLKELA 240 +++ IN R AG +RQ DS + S L F++ + D P L + + +L Sbjct: 185 KRLLNNEDLFINPRNAAAG-TLRQLDSKIVASRNLDAFLYYYISDDSPNLNQYESILKLN 243 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRHWLPGQ 296 GF T T KN D++ +++ K +L + DG+V + + S + Sbjct: 244 QLGFK-TNKETMLCKNLDQIKAYIDKYTNLKNDLDYQIDGIVFKINDKNLQNSLGFTSKI 302 Query: 297 AEWLVAWKYQPVAQVAEVKAIQ-FA-VGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 +W +A+K+ P A++ + K + FA VG++GKI+ A L PV L + + + Sbjct: 303 PKWAIAYKF-P-AEIKQTKLLDIFATVGRTGKITYNAKLEPVFLMGATISAATLNNAEYI 360 Query: 355 QEWDIAPGDQILVSLAGQGIPR----IDDVVWRGAERTKP--------TPPENRFNSLTC 402 + D+ + + AG IP I D + E +P + E N + Sbjct: 361 KSKDLRINSIVKIKKAGDVIPEVIEAIKDETFYNLEVFQPILYCPNCHSLLEKNENEVDQ 420 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQ 460 + + C + + L +++ + + +G+ L ++I L +Q+ Sbjct: 421 FCINSSCSMKILRSLQHFSSREAMNIVSLGDRSLEILFNLEIIQNISDIYKLEEYKDQIL 480 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQLLFSTE 517 L N+++ + + +GI A + A ++ L+ ++ Sbjct: 481 AIENFGLKSYLNLIDSINMSKNNSLEKVLFGLGIRHIGSKTAKILARKYQNIDNLMKASY 540 Query: 518 QFWQQLPGTGSGRARQVIEW 537 Q+ G A +I+W Sbjct: 541 DELIQINSIGESLALSIIDW 560 >UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=DNLJ_WIGBR Length = 591 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 113/561 (20%), Positives = 235/561 (41%), Gaps = 69/561 (12%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVM 83 + + +I L+++I+ W+++Y+ + S V D YD L + ++ + S ++ Sbjct: 9 KIKTKILNLRKKIEMWNNNYYVKNLSLVSDEKYDSTLFELNELEKKYSMFLNTSYSNKIV 68 Query: 84 MPPLNGA---VMHPVAHTGVRKMVD-KNALS--------LWMRERSDLWVQPKVDGVAVT 131 + + H + + + KN L+ L+ E+ + K+DG+A+ Sbjct: 69 AKNICNKFKKIKHLSNMLSLESIFNYKNLLNFHEKVKKNLFYNEKRYYCCELKIDGLAIN 128 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQ-----TVSGPLANSTLQGEIFLQRE 186 L+Y++G L+ A +RG+GL+GED T+ I ++P +S P ++GE+F++ Sbjct: 129 LIYKNGILDSASTRGDGLQGEDVTKNALEIKSIPHILKKNNLSFP-KKIEIRGEVFIKLS 187 Query: 187 --GHIQQQMGG------INARAKVAGLMMRQDDSDTLN-SLGVFVW--AWPDGPQLMSDR 235 I + + NAR +G + + + T N SL + + + + + D+ Sbjct: 188 TFNKINKMLKSKRKKLFSNARNMASGSLRQINPKITKNRSLSFYGYGIGYVNEKKYYYDQ 247 Query: 236 ---LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVR--AAKEPE 288 LK + + G + + T K+ +EV + K L F DG+VV+ + K + Sbjct: 248 HDALKLINSWGIPIEKN-TELCKSLNEVKNFYEKSIKIRDYLDFNIDGIVVKVNSMKLQK 306 Query: 289 SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 W +A+K+ + ++ + F VG++G I+ VA L PV ++ ++ Sbjct: 307 KLGCSSKYPRWAIAYKFSSEEKCTKILGVNFNVGRTGVITPVAKLKPVYFMGTIIKYSSL 366 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP-PENRFNSLTCYFASD 407 + + I D + + +G IP+I V++ + K P+ TC F Sbjct: 367 HNKDIIDKLGIMINDTVCLKKSGDVIPKISRVIFEKRKNVKEIIFPK------TCIFCKS 420 Query: 408 -----------------VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 +C Q L +++ L + G+G L + ++ Sbjct: 421 KIEFCLRKKNLYCTGGFLCYAQRKQLLNHFVSREALNIKGMGNKIISQLIEKKIIKYPSD 480 Query: 451 WLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT--RAALN-ASDER 507 L +++ G+ S L + ++ R + +GIP ++N A+ + Sbjct: 481 IFKLNTDKIIFLKGMGLKSSENLIKEIIKSKTTELYRVIYGIGIPNVGIYTSMNLANYYK 540 Query: 508 SWSQLLFSTEQFWQQLPGTGS 528 + S + ++ + + + G GS Sbjct: 541 NISNFINTSYEDLRSIKGIGS 561 >UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus RepID=DNLJ_BDEBA Length = 684 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 132/590 (22%), Positives = 242/590 (41%), Gaps = 69/590 (11%) Query: 14 WQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR 73 W S + A +S ++ + E L++ I + D +Y K + D YDQL A L ++ Sbjct: 9 WTSEMGA---NYSMSKKRHE--ELKKIISEHDHNYHVLDKPTITDYEYDQLFAELLDIEK 63 Query: 74 C-FGSEPRDVMMPPLNGAVMHPVAHTGVR--KMVDKNALS--------------LWMRER 116 G + D + G V+ R + N+ S L + Sbjct: 64 NPKGLDLSDSPSQRVGGTVLEGFTKAQHRLPMLSLANSYSPEDIFEFDERVRKFLNTEDP 123 Query: 117 SDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--GPLAN 174 + + K DG+++ L+Y +G+L +AI+RG+G GED T + I ++P +S P Sbjct: 124 VEYLCELKFDGLSMELIYENGQLVRAITRGDGTVGEDVTHNIKTIKSIPLKLSHKNPPPL 183 Query: 175 STLQGEIFLQRE-----GHIQQQMGG---INARAKVAGLMMRQDDSDTLNS--LGVFVWA 224 ++GE+ + +E QQ+ G N R AG +RQ DS S L F +A Sbjct: 184 LEVRGEVLMFKEDFARLNETQQENGQQTFANPRNAAAG-TVRQLDSRIAASRPLRFFGYA 242 Query: 225 W--PDGPQLMSDR-LKE-LATAGFTLTQTYTR----AVKNADEVARVRN--EWWKAELPF 274 +G + + ++E G Y K +EV + + E + +LPF Sbjct: 243 LGAVEGETFNTQKNIQEYFNDHGIPTVLPYKEDLLVVAKGPEEVVKYYHHIEKVRPKLPF 302 Query: 275 VTDGVVVR--AAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVAS 332 DGVV++ + + E + W A K++P V+ I VG++G ++ VA Sbjct: 303 DIDGVVIKVNSLRLQEDLGLVARSPRWATAAKFKPEQAQTTVEDIVVQVGRTGALTPVAI 362 Query: 333 LAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV---WRGAERTK 389 + PV + V + + DI GD +++ AG IP + +VV R A+R Sbjct: 363 MKPVKVGGVTVTNATLHNQDEITRKDIRIGDTVIIQRAGDVIPEVVEVVNPDKRPADRLP 422 Query: 390 PTPPENRFNSLTCYFASDVCQEQFISRLV-------------WLGAKQVLGLDGIGEAGW 436 + PE C + + + ++R V A++ + +D +G+ Sbjct: 423 YSIPE---RCPACDSVAVKAEGEVVTRCVNPLCIAVVKESLKHFVARRAMNIDKVGDRLI 479 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 L + LT EQ+ + + + ++ R++ A+GI Sbjct: 480 ETLVDNKLLTRFSDFYRLTKEQILSLERQGDKSADNIIKSIENSKNPTLARFIFALGIRF 539 Query: 497 T--RAALNASDE-RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQI 543 + + +D + + L ++E+ Q+P G+ A+ + +W N ++ Sbjct: 540 VGEQTGKHLADHFLTIDKFLEASEEELLQVPEIGAKVAKSIRDWTGNPKL 589 >UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDU0_RHOVA Length = 777 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 123/538 (22%), Positives = 215/538 (39%), Gaps = 80/538 (14%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP--PL 87 A++E L +I + D +++ E+ D YD+L RL + F S ++ P P Sbjct: 64 AKDEHDALAAEIARHDL-LYQDAAPEISDAEYDRLRLRLNALEAAFPS----LITPESPS 118 Query: 88 NGAVMHP------VAHTGVRKMVDKNALS----------------LWMRERSDLWVQPKV 125 P V HT VR + N S E D+ + K+ Sbjct: 119 QTVGATPSEKFAKVRHT-VRMLSLGNVFSDEDVADFAGRVRRFLKFAPDEALDVTAEMKI 177 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFL 183 DG++V+L Y +G+L A +RG+G +GED T V I+ +PQ + + + GE+++ Sbjct: 178 DGLSVSLRYENGRLAVAATRGDGSEGEDVTANVRTIADIPQVIRANDVPAVFEVRGEVYM 237 Query: 184 QR---EGHIQQQMGG-----INARAKVAGLMMRQDDSDT-LNSLGVFVW------AWPDG 228 + ++Q+G N R AG + + D + T L F W W + Sbjct: 238 SHADFQALNERQVGKGGRMFANPRNAAAGSLRQLDPAITAARPLRFFAWGWGEVRGWGEA 297 Query: 229 PQLMSDR----LKELATAGFTLTQT-YTRAVKNADEVARVRNEWWKAELPFVTDGVVVRA 283 L +D L+ + GF L R+V+ V R E +A L + DGVV + Sbjct: 298 SALPADTNFGVLQAIHGWGFPLPPVEICRSVEEMLAVYRA-IEMKRASLGYDIDGVVYKV 356 Query: 284 AKEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + E ++ W A K+ + I VG++G ++ VA LAPV + Sbjct: 357 NRLDLQERLGFISRTPRWATAHKFSAEKATTVLNGIDIQVGRTGALTPVAKLAPVTVGGV 416 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR------------------ 383 VQ + + + D+ GD ++V AG IP+I V Sbjct: 417 VVQNATLHNEDEIRRKDVRIGDTVIVQRAGDVIPQILGPVLEQRPADAVEFVFPTLCPVC 476 Query: 384 GAERTKPTPPEN-RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 G+ + T P+ + +++ +C Q + RL ++ ++G+GE +A Sbjct: 477 GSHAVRETHPKTGKVDAVRRCTGGLICAAQAVERLRHFVSRHAFDIEGLGEKNIQAFFDE 536 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSK------SAQLWHQFNLARKQPFTRWVMAMGI 494 R + + + P +++ + +A L+ R R++ A+GI Sbjct: 537 GRIKAPADIFTMAARDGVDLPKLSEKEGWGAQSAANLFAAIEARRTISLERFIFALGI 594 >UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYX3_JONDD Length = 798 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 100/395 (25%), Positives = 171/395 (43%), Gaps = 56/395 (14%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA 90 QE+ RL + I+++ +Y+ +G+S V D YD L A L + G P+ + G Sbjct: 54 QEQWERLARLIQRYQFEYYIQGESSVPDADYDALLAELVAVEEQLGGAPQGSPTQRVGGT 113 Query: 91 VMHPVAHTGVRK--MVDKNALSL-----WM-RERSDL-------WVQPKVDGVAVTLVYR 135 R+ + NA SL W R +L + K+DG+AV+L Y Sbjct: 114 FSTEFEEVDHRQPMLSLDNAFSLEELQAWADRVHGELSGGAVSYLCEVKIDGLAVSLTYE 173 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS----TLQGEIFLQRE----- 186 G+L +A++RG+G GED T V I ++PQ + G A ++GE+F++ Sbjct: 174 RGELVRALTRGDGQTGEDVTLNVQTIRSIPQRLGGDPAFHPQVVEIRGEVFMKVADFADL 233 Query: 187 GHIQQQMGG---INARAKVAGLMMRQDDSDT------LNSLGVFVWAWPDGPQLMSDRLK 237 Q + GG N R AG + ++D T + + G+ W + R Sbjct: 234 NDSQARQGGKTFANPRNAAAGSLRQKDPRVTAQRRLSMYAHGIGALEWDGQSPVDLARQS 293 Query: 238 ELATAGFTLTQ-------TYTRAVKNADEVARVRNEWWKAE---LPFVTDGVVVR----- 282 ++ + L Q ++ + D V R + E+++ + DG V++ Sbjct: 294 DV----YALYQQWGIPVSSHNSVEHDLDAVTR-KIEYYRENRHSIEHELDGFVIKVDEVA 348 Query: 283 AAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 A K+ S P W +A+KY P + IQ VG++G+++ + PV++ Sbjct: 349 AQKQLGSTSRAP---RWAIAFKYPPEEVTTRLLDIQVNVGRTGRVTPFGMMEPVLVAGST 405 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 V + + + D+ PGD ++V AG IP I Sbjct: 406 VSMATLHNFHEVRRKDVRPGDTVIVRKAGDVIPEI 440 >UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS Length = 823 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 94/381 (24%), Positives = 168/381 (44%), Gaps = 41/381 (10%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNG 89 AQ + L++ I D Y+ +S++ D +D L W+ +P + ++ + Sbjct: 4 AQRRVQELEKLILHHQDRYYN-AESDISDDAFDAL------WEELARLDPGNPLLKAIGS 56 Query: 90 -----AVM--HPVAHTGVRKMVDKNALSLWMRERS--DLWVQPKVDGVAVTLVYRDGKLN 140 AV H V K D+ + S W ++ + VQ K+DGV++ L Y G Sbjct: 57 DSQRDAVKKRHIVPMGSQHKAADEESFSAWAKKNALQAFLVQHKLDGVSLELQYERGHFC 116 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVS---GPLAN----STLQGEIFLQREGHIQQQM 193 A++RGNG+ G+D T V + T++ GP N ++GE+ + ++ H Sbjct: 117 CALTRGNGIVGDDVTANVRGMRGFVPTLTAEWGPCGNLPFTGGVRGEVIMHKDIHRSHYP 176 Query: 194 GGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQL----------MSDRLKELATAG 243 N R V G++ R+D + V A P P +++L LA G Sbjct: 177 THANCRNTVNGILKRKDGRGRTHLHIVCYDAVPGTPGKPFTGSLPFADETEKLAWLARQG 236 Query: 244 FTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVRAAKEPESRHWLPGQAEWLV 301 F ++ A NA EV +R+E + LP+ DG+VV++ LP + + + Sbjct: 237 FVTVHSHRCA--NAQEVVALRSEIMRTRELLPYSIDGLVVKSTDLDFQDAQLP-RPKKQI 293 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSG-KISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA 360 A+K+ + ++ +Q+ SG + + PV L V+R N+ + + + Sbjct: 294 AFKFSTQEAITTLRDVQWQT--SGVTYTPIGITDPVRLAGTTVKRANLCNPNMLTKLCLK 351 Query: 361 PGDQILVSLAGQGIPRIDDVV 381 G +L+S G+ IP+I+ +V Sbjct: 352 IGSHVLISKRGEIIPKIEALV 372 >UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF Length = 699 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 129/504 (25%), Positives = 209/504 (41%), Gaps = 81/504 (16%) Query: 122 QPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLIS------AVPQTVSGPLANS 175 +PK+DG+AV LVY G+L + +RG+G+ GED T + + VP+ ++G + Sbjct: 121 EPKLDGLAVELVYEGGRLVQGSTRGDGVNGEDVTANLRTVGRTRANRGVPERLAGEVPPR 180 Query: 176 T-LQGEIFLQREGHIQQQMGGI---------NARAKVAGLMMRQDDSDTLNSLGVFV--- 222 ++GE+ L +E H + I N R AG + + D T F+ Sbjct: 181 VEVRGEVLLFKE-HFEAMNRQILRAGDEPFANPRNAAAGSLRQLDWRVTARRPLSFIAYE 239 Query: 223 ---------------WAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVA-RVRNE 266 WAW + +++L+ LA GF R A A R R Sbjct: 240 ALVPGAEPGGARAGPWAW----RTHAEKLEALARWGFETNAENERCEGIAAVKAYRDRMA 295 Query: 267 WWKAELPFVTDGVVVRAAKEPESRHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGK 323 + LP+ TDGVVV+ + + R L ++ W VA+KY P + ++ I +VG+ Sbjct: 296 ERRFALPYDTDGVVVKV-DDLDWRRRLGAASKFPRWAVAFKYPPQEEATRIRRIWASVGR 354 Query: 324 SGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW- 382 +G ++ V PV L V R + + + D+ GD ILV AG+ IP +VV Sbjct: 355 TGILTPVVDFEPVRLSGAMVSRATLHNEDEMRRKDVLEGDWILVRRAGEVIP---EVVMP 411 Query: 383 -----RGAERTKPTPPEN--------RFNSLTCYFASD-VCQEQFISRLVWLGAKQVLGL 428 G ER P E R Y + C Q + RL ++ + + Sbjct: 412 LKERRTGEERPFAFPAECPICGAKVVREEGEKVYRCTGAACPAQLVGRLTHFAQRRAMDI 471 Query: 429 DGIGEAGWRALHQTHR-FEHIFSWLLLTP----EQLQNTPGIAK--------SKSAQ-LW 474 DG+G+ AL R F+ L P ++L + P + KSAQ + Sbjct: 472 DGLGDK--LALGLVERGLVKDFADLYAVPFPAWQELFSRPRKEERDAKAELPQKSAQNMV 529 Query: 475 HQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQL---LFSTEQFWQQLPGTGSGRA 531 ++ R + A+GIP A A+ R + +L + ++E + G A Sbjct: 530 DALERSKATTLRRLLFALGIPQVGEATAATLARHFGELARFMDASEDALLAVRDVGPETA 589 Query: 532 RQVIEWKENAQIKKLGSWLAAQQI 555 R++ W E Q +++ L A + Sbjct: 590 REIRAWTEEPQNRRVVERLLAAGV 613 >UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=DNLJ_PELPD Length = 704 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 134/542 (24%), Positives = 219/542 (40%), Gaps = 92/542 (16%) Query: 32 EEISRLQQQIKQWDDDYWKE--GKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMMPPLN 88 E I L+Q I + Y++ + E+ D YD+L L + + F + D + Sbjct: 16 ERIQELRQLIAHNNRLYYENIPPRREIHDYEYDELFKELQELESRFPEFQSADSPTQIVG 75 Query: 89 GAV------------MHPVAHTGVRKMVDK----------NALSLWMRERSDLWVQPKVD 126 G+V M + + V KM+ + +A+S+ D+ +PK+D Sbjct: 76 GSVSEGFKKVQHSVPMLSIENKPVTKMLSEVRSIIKELKDDAISI------DIVAEPKID 129 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS---TLQGEIFL 183 G++ ++ Y +L +A +RG+GL+GED T V IS +P+ + PL ++GE+++ Sbjct: 130 GLSCSIRYEKHQLVRAATRGDGLEGEDITVNVHSISEIPKIL--PLDAPEVIEIRGEVYM 187 Query: 184 QREGHIQ--QQMGGI------NARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLMS- 233 Q Q I N R AG + + D S T + L F +AW + + Sbjct: 188 SNSDFKQYTAQQNKIGEKPPENPRNAAAGSLRQLDPSVTASRPLRFFAYAWGEISNSFAK 247 Query: 234 ---DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPE 288 D L+ L GF + R + ++DE+ E ++EL F DG+V + Sbjct: 248 SQWDALQTLRGWGFKVCDD-IRLLYSSDELNSYFEEMQERRSELDFTIDGIVYKLNS--L 304 Query: 289 SRHWLPGQAE----WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 S GQ W A K+ P + ++ I +VG+SG ++ VA L PV L V Sbjct: 305 SLQERVGQTNRAPRWAAAQKFPPEKRETLLQNITISVGRSGALTPVAELLPVRLLGTTVS 364 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP----------- 393 + + + D D I+V AG IP++ VV +R + P Sbjct: 365 NATLHNQDEVECKDFRIDDTIVVQRAGDVIPQVVSVVIE--KRLSGSIPFVFPSACPVCG 422 Query: 394 -----ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ------- 441 E R C C Q + RL ++ +DG+GE + Sbjct: 423 SKAVREPREAVWKCT-GGLTCPAQSLERLKHFVSRDAFNIDGLGEKNIELFYNKGLLASP 481 Query: 442 --THRFEHIFSWLLL---TPEQ---LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMG 493 R E I S LL P + LQ G + + L+ +K R++ A+G Sbjct: 482 VDIFRLEEILSPPLLWQQKPSEFKPLQEWDGWGELSANNLFRAIRTKQKITLYRFIYALG 541 Query: 494 IP 495 IP Sbjct: 542 IP 543 >UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZ73_9ACTO Length = 806 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 127/539 (23%), Positives = 224/539 (41%), Gaps = 91/539 (16%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARL----TQWQRCFGSEPRDV 82 PA A + L +I Q DY+ D YD L L +W D Sbjct: 30 PAEATAKWRDLVTEINQMRFDYYNLDAPTASDAEYDVLFEELKDLEAKWPMLVTP---DS 86 Query: 83 MMPPLNGAVMH---PVAH-------------TGVRKMVDKNALSLWMRERSDLWVQPKVD 126 + G+ ++ PVAH + +D+ L M + ++ + KVD Sbjct: 87 PTQTVGGSAVNTFAPVAHRIPMLSLDDVFSVEATHQWLDRCLTGLGMNQ-VEILAEVKVD 145 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL-ANSTLQGEIFLQR 185 G+AV+++Y +G L +A +RG+G GED T V IS VP+ ++G A+ ++GEI+ Sbjct: 146 GLAVSILYENGLLTRAATRGDGRVGEDVTANVLTISNVPRQLTGDFPASVEVRGEIYFPI 205 Query: 186 EGHI----QQQMGG----INARAKVAGLMMRQDDSDT--------LNSLGVFVWAWPDGP 229 + Q+ + G +NAR AG + ++D ++T + +G++ +G Sbjct: 206 ADFLDFNEQRALRGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVCHGIGIY-----EGG 260 Query: 230 QLMSDR----LKELATAGFTLTQTYTRAVKNADEVARVRNEWWK--AELPFVTDGVVVRA 283 Q D ++L G +++ YTR + E+ V + K A+L DG+V + Sbjct: 261 QSQPDSQHAWYEQLKAWGLPVSE-YTRLISTHAEIDEVIEYFGKHRADLSHEIDGMVFKV 319 Query: 284 AKEPESRHWLPG------QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVM 337 +SR + W A+K+ P + I+ VG++G+++ + V+ Sbjct: 320 ----DSRQYQAALGTTSRAPRWAAAYKFPPTEVHTRLLDIRTQVGRTGRVTPYGVMEKVL 375 Query: 338 LDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI---DDVVWRGAERT------ 388 + V + + + + GD +++ AG IP I + + G+ER Sbjct: 376 VAGSHVSSATLHNQDEVKRKGVLIGDMVILRKAGDVIPEILGPVESLRDGSERAFVMPSH 435 Query: 389 -----KPTPPENRFN-SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ- 441 P P + L C + C Q R+ ++G + ++G+G+ AL Q Sbjct: 436 CPSCGAPLAPAKEGDVDLRCPNQAS-CPAQITQRISFMGGRSAFDIEGLGDESALALTQP 494 Query: 442 -THRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRA 499 +RFE I + P L T ++ K+ QL FTR + G +T+A Sbjct: 495 EVNRFEVISALAAGEPVLLAET-DTSEDKTIQL---------DSFTRENLHHGELITQA 543 >UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB Length = 794 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 104/424 (24%), Positives = 174/424 (41%), Gaps = 57/424 (13%) Query: 122 QPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--G 179 +PK+DG+AV+L+Y G+L + +RG+G GED T V I VP + G L+ G Sbjct: 126 EPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLHGEGWPEILEVRG 185 Query: 180 EIFLQREGH-----IQQQMGG---INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG--- 228 E+F+ + G + GG N R AG +RQ DS S + A+ G Sbjct: 186 EVFMSKAGFEALNAKAVETGGKTFANPRNAAAG-SLRQLDSKITASRPLEFCAYGFGQVS 244 Query: 229 ---PQLMSDRLKELATAGFTLTQTYTRAVKNA-------DEVARVRNEWWKAELPFVTDG 278 P L+ G +++ R VK A D++ R R+ L + DG Sbjct: 245 GTLPDTQVGILEAFRGWGIPISREL-RLVKGAQACRDYYDDIGRRRD-----ALAYEIDG 298 Query: 279 VVVRAAKEPESRH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPV 336 VV + + R + + W +A K+ ++ E+ ++F VG++G ++ VA L PV Sbjct: 299 VVFKVNRIAFQRELGFRAREPRWAIAHKFPAREELTELLGVEFQVGRTGAVTPVARLKPV 358 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR------------- 383 + V + ++ + GD +++ AG IP++ VV Sbjct: 359 QVAGVTVSNATLHNMDEVARLGLRIGDTVVIRRAGDVIPQVMQVVLERRPADAQAIEVPE 418 Query: 384 -------GAERT---KPTPPENRFNSLTCY--FASDVCQEQFISRLVWLGAKQVLGLDGI 431 ERT K + + + Y CQ Q ++ +++ + +DG+ Sbjct: 419 HCPVCGSAVERTQLVKRSKGKESISEGAIYRCVGRLSCQAQLKQAIIHFVSRRAMDIDGL 478 Query: 432 GEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMA 491 G+ L LT EQ+ G A+ + L +RK R++ A Sbjct: 479 GDKIVEQLVDRGLVASPADLYTLTYEQVFELEGFAELSTNNLLAAIADSRKPSLARFIFA 538 Query: 492 MGIP 495 +GIP Sbjct: 539 LGIP 542 >UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBA4_9BACT Length = 626 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 127/541 (23%), Positives = 232/541 (42%), Gaps = 80/541 (14%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPL--N 88 ++E+ RL I+ + YW EG+ E+ D YD+L L + + R V P + + Sbjct: 13 RDELIRL---IEYHNRRYWDEGEPEIPDARYDELIRALQKLEPDHELVTR-VYAPAVAGS 68 Query: 89 GAVMHPVAHTGVRKMVDKNALSLWMR-----ERSDLWVQPKVDGVAVTLVYRDGKLNKAI 143 G V H + K + W + E +L V+PK DG++ DG++ Sbjct: 69 GKVRHLRPMLSLDKAYSLEEVLEWAKKFARSEDEELLVEPKYDGISANF---DGRVLS-- 123 Query: 144 SRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQRE------GHIQQQMGGI- 196 +RG+G GE+ T K+ L+ +G + + ++GE+ ++ + HI+++ GG+ Sbjct: 124 TRGDGELGENITDKLPLVELETAGHTGKV-DRPVRGELVIRDDDFKTLYSHIRKKGGGVY 182 Query: 197 -NARAKVAGLM-MRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAV 254 N+R VAG+M +++ L + + + L+S R+K Y+ Sbjct: 183 KNSRNAVAGIMGLKEIAEMELQGAKITLVDY----NLVSFRVK------------YSELA 226 Query: 255 KNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR------HWLPGQAEWLVAWKYQPV 308 +E+ R LP+ DG+V++ A S H G+ +A+K+ + Sbjct: 227 AKWEELRR-----QLEALPYPQDGIVIKLADSAYSASLGNTAHHPRGE----IAFKFTNI 277 Query: 309 AQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVS 368 + + ++++ GK+ ++ VA L PV + ++R + +++ E + GD + V Sbjct: 278 RRETRLIGVEWSFGKNC-LTPVAELEPVEISGTTIRRATLHNIQNILELGVQIGDTVTVE 336 Query: 369 LAGQGIPRIDDVVWRGAERTKPTPPE---------NRFNSLTCYFASDVCQEQFISRLVW 419 AG IP I G ER P + R L C + C E + RL Sbjct: 337 RAGDVIPYIVSSTP-GEERRSPLIEDCPSCGAKLVRRGPELCC--PNPECPETQLQRLA- 392 Query: 420 LGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNL 479 A + LG++ +GE R L + H+ LT L G A +A L + Sbjct: 393 -AAVRNLGIERLGEPTLRKLMENSGVRHLGDLFELTAMDLLRLDGFAAKSAANLIEEIQK 451 Query: 480 ARKQPFTRWVMAMGIP-----LTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQV 534 AR + + A+ IP + + + +D ++ L +E+ +PG G RA+ + Sbjct: 452 ARIVNDYQLLAALNIPNIGANVAKVIFSHTD---FAGLRRMSEEELSAIPGIGPERAKAL 508 Query: 535 I 535 + Sbjct: 509 V 509 >UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG Length = 658 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 111/558 (19%), Positives = 216/558 (38%), Gaps = 60/558 (10%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN 88 ++Q+E + Y+ +S V D VYD+L L ++ P D+ Sbjct: 3 KSQKEYLERIAYLNTLSHHYYNLDESIVSDAVYDELYQELKAYEE---KNPNDIQANSPT 59 Query: 89 GAVMHPVAHT-----------GVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVT 131 V ++ + + +++ L W++ + PK+DGV++ Sbjct: 60 QKVGATATNSFNKNPHLMRMWSLDDVFNQSELQAWLQRILKTYPSASFVCSPKLDGVSLN 119 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ 191 L+Y+ GKL A +RGNGL+GE T I+ +P ++ ++GE+ + +E Sbjct: 120 LLYQHGKLVSATTRGNGLEGELVTNNAKHIANIPHFIAYD-GEIEIRGEVIISKEDFDAL 178 Query: 192 QMGGINARA-------KVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMS-----DRLKEL 239 +NA A +RQ DS+ + W G ++ + L + Sbjct: 179 NKERLNANEPLFANPRNAASGSLRQLDSEITKKRKLQFIPWGVGKHSLNFLSFKECLDFI 238 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPF--VTDG--VVVRAAKEPESRHWLPG 295 + GF+ Q Y KN E+ + + F + DG +VV + + Sbjct: 239 VSLGFSAIQ-YLNLNKNHQEIEENYHTLIREREGFFALLDGMVIVVNELNIQKELGYTQK 297 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 ++ A+K+ + + ++ + VG+SG I+ VA L PV + + R + + + Sbjct: 298 SPKFACAYKFPALEKHTKIVGVINQVGRSGAITPVALLEPVEIAGAMINRATLHNYSEIE 357 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNSLTCYFASD--VCQE 411 + +I D+++V +G IP+I + +R + K P+ C S +C+E Sbjct: 358 KKNIMLNDKVVVIRSGDVIPKIIKPLETYRDGSQQKIMRPK------VCPICSHELLCEE 411 Query: 412 QFI------------SRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 F L+ +K L + G+G+ L + + L E L Sbjct: 412 IFTYCQNLNCPARLKESLIHFASKDALNIQGLGDKVIEQLFEEKLIVNALDLYALKLEDL 471 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQF 519 K+ L ++ P R + A+GI + + + +L +E Sbjct: 472 MRLDKFKIKKAQNLLDAIQKSKNPPLWRLINALGIEHIGKGASKTLAKYGLNVLEKSEAE 531 Query: 520 WQQLPGTGSGRARQVIEW 537 + ++ G G R ++ + Sbjct: 532 FLEMEGFGVEMVRSLVNF 549 >UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DNLJ_XANOM Length = 841 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 115/508 (22%), Positives = 209/508 (41%), Gaps = 72/508 (14%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-------------GSE 78 E L+++I+ D Y+ E+ D YDQL L + ++ + G Sbjct: 7 ERARELRRRIENADHRYYDLADPEITDAQYDQLFRELQELEQKYPELVTADSPSMRVGGA 66 Query: 79 PRDVMMPPLNGAVMHPVAH----TGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVY 134 R + + M +A+ V+ VD+ + + V+PK DG+A++L Y Sbjct: 67 VRKSFVKVRHSIPMLSLANAFDEVEVKNFVDRIFRRMGSSNPLEFSVEPKFDGLAISLRY 126 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREGHIQQQ 192 GK + ++RG+G GED ++ + I +VP + G + L+ GE+++ R+G + Sbjct: 127 ELGKFVQGVTRGDGDVGEDVSENIRTIRSVPLKLKGNNVPAILEVRGEVYMPRDGFSEFN 186 Query: 193 MGGI--------NARAKVAGLMMRQDDS--DTLNSLGVFVWA----------WPDGPQLM 232 + N R AG +RQ DS L F + + + PQ + Sbjct: 187 KRAMARGEKLLANPRNGAAG-SLRQLDSRISAQRPLSFFAYGVGLIQVEQDLFEEIPQSI 245 Query: 233 ----SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVRAAKE 286 S L +L GF ++ + V+ +D + +A LPF DGVV + Sbjct: 246 ASTHSAMLAQLRAWGFPVS-SLVEVVQGSDGLLAYYQRIGEARDGLPFDIDGVVYKLDDL 304 Query: 287 PESRH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 R ++ W +A K+ Q V+AI+ +G++G + VA L PV + V Sbjct: 305 AGQREMGFVSRAPRWALAHKFPAQEQSTTVEAIEIQIGRTGAATPVARLKPVHVAGVIVT 364 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYF 404 + + + D+ GD ++V AG IP + VV A++ P + + Sbjct: 365 NATLHNADQIARLDVRVGDTVIVRRAGDVIPEVAAVV---ADQRPPATQSWQMPTQCPVC 421 Query: 405 ASDVCQEQFISRLVW------------------LGAKQVLGLDGIGEAGWRALHQTHRFE 446 S++ +E+ + VW +++ + +DG+GE L + + Sbjct: 422 GSEIVREE--GQAVWRCSGELTCPAQRKEAFRHFVSRRAMDVDGLGEKFIEVLVDSGVVQ 479 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLW 474 + LLT +QL I+ ++S + Sbjct: 480 GVADLYLLTVDQLLQLRMISTAESPHAF 507 >UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=DNLJ_SORC5 Length = 676 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 24/279 (8%) Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANS 175 DL+V K+DG+++ ++Y+ GKL AI+RG+G GE T V+ + +P + G L Sbjct: 142 DLFVAEKLDGISIEVIYKGGKLVDAITRGDGEWGERITANVARMKGIPSRIREKGRL--- 198 Query: 176 TLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDR 235 +++GEI L R +++ G+ + +A ++ D V + D ++ + R Sbjct: 199 SVRGEIIL-RLSDMKRHFPGVTSPRNMAAGAAKRFDGQGAEHCTVLFYDVADHLEIPTCR 257 Query: 236 -----LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR 290 L+EL GF QT +V++ ++ R + +A L + DG+VV +S Sbjct: 258 ARFAWLREL---GFATPQTAHGSVEDVVKLYRRYSSELRAGLDYEIDGLVVYV----DSL 310 Query: 291 H--WLPGQAE----WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 H L G VA+K+ A+V V AIQ+ G SG+++ VA + PV L V+ Sbjct: 311 HVQGLLGDVNRRPRGAVAFKFASPAKVTTVVAIQWDTGPSGRVTPVAIVEPVELAGANVR 370 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR 383 R ++ + + I GD++LVS IP +++VV + Sbjct: 371 RASLHNSANVRSLGIGVGDEVLVSRRNDVIPYVEEVVEK 409 >UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DNLJ_AZOC5 Length = 739 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 130/556 (23%), Positives = 221/556 (39%), Gaps = 98/556 (17%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM 84 S A +E + L Q+I D Y++E + D YD+L R + F + D + Sbjct: 18 LSATEASDEHAALSQEIASHDARYYQEDAPVISDADYDRLRRRYEDIEARFPALKNDDSL 77 Query: 85 PPLNGA--------VMHPV---------AHTGVRKMVDKNALSLWMRERSDL--WVQPKV 125 GA V+H V + V + V + L + E ++L +PK+ Sbjct: 78 SRKVGAAPSAKFAKVVHQVPMLSLQNAFSDEEVEEFVARVRRFLNLAESAELAFTAEPKI 137 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST--LQGEIFL 183 DG++ +L Y G L +A +RG+G +GED T V I+ +P ++G ++GE+++ Sbjct: 138 DGLSCSLRYEGGVLVRAATRGDGTQGEDVTANVRTIAEIPHRLTGAGVPDIIDIRGEVYM 197 Query: 184 QREGHI-----QQQMGG---INARAKVAGLMMRQDDSDTLNS--LGVFVWAW---PDGPQ 230 + + Q++ G N R AG +RQ D + S L F +AW GP Sbjct: 198 GKADFLALNARQEEAGKPVFANPRNAAAG-SLRQLDPEITRSRPLRFFAYAWGQAEPGPP 256 Query: 231 LMS-----DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVV--VRA 283 S D + LT T A ++ E +A L + DGVV V + Sbjct: 257 GASQHEVVDAFRRFGLPTNPLTIRVTDAAGLLAHYRKIGAE--RASLGYDIDGVVYKVDS 314 Query: 284 AKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL---------- 333 E ++ W +A K+ ++AI+ VG++G ++ VA L Sbjct: 315 LALQERLGFVSRSPRWAIAHKFAAEQATTVIEAIEIQVGRTGALTPVAKLTPVTVGGVVV 374 Query: 334 APVMLDDKKVQRVNIGSVRRWQEW-DIAPGDQILVSLAGQGIPRIDDVVW--RGAERT-- 388 + L ++ R G+ +E DI GD ++V AG IP++ VV R A T Sbjct: 375 SNATLHNEDYIRAIGGNGEEIREGIDIRVGDTVVVQRAGDVIPQVVSVVLDKRPAGATAY 434 Query: 389 ---------------KPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGE 433 + P + +++ +C Q + RL ++ ++G+GE Sbjct: 435 QFPHHCPVCNSQAVREVDPKTGKQDAVRRCTGGLICPAQAVERLRHFVSRNAFDIEGLGE 494 Query: 434 AGWRALHQTHRFEHIFSWLLLTP---------------EQLQNTPGIAKSKSAQLWHQFN 478 Q H F + W L+ +L+N G ++ + L+ Sbjct: 495 ------KQAHAF---YEWKLIAEPADIFRLQARNEQSLSKLENREGWGRTSAQNLFAAIE 545 Query: 479 LARKQPFTRWVMAMGI 494 R R++ A+GI Sbjct: 546 ARRTIALDRFIFALGI 561 >UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZM17_PLALI Length = 707 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 117/481 (24%), Positives = 195/481 (40%), Gaps = 85/481 (17%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEP 79 S +A+ + +L+Q+I++ D Y+ ++E+ D YD+L ARL + + F S Sbjct: 18 SADQARHLLDKLRQEIRRHDRLYYVLAQNEISDLEYDRLMARLLEVEAAFPELTTADSPS 77 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLW----MRERSDL-WVQP-------KV 125 + V P+ G V H V + + D++ L + R S++ W P KV Sbjct: 78 QKVGGEPIEGFVQVAHSVPMLSIDNVYDESGLLEFGQKVSRRASEVGWKGPMEWLAEFKV 137 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQR 185 DGVA++L+Y +GKL +A++RG+G G+D T I VP + + +L E + R Sbjct: 138 DGVALSLIYEEGKLIRAVTRGDGRVGDDVTHNAKTIKGVPLFLEDGSSKKSLFAESNIPR 197 Query: 186 ------EGHI-QQQMGGI-------------NARAKVAGLMMRQDDSDT--------LNS 217 E +I Q + N+R AG + D +S Sbjct: 198 LLEVRGEAYIGNQDFAKVRAHQLERGEEPFKNSRNATAGSLKLLDPKLCAQRQLRFFAHS 257 Query: 218 LGVFVWAWPDGPQLMSDRLKELATAGF-TLTQTYTRAVKNADEVARVRNEWWKAELPFVT 276 LG + +D L+ G T+ T A A + L F Sbjct: 258 LGAIDEQEATRFKTHADYLELFYQVGLPTVPMTACHPSFEAAVAASPTMMEALSTLDFEV 317 Query: 277 DGVVVRAAKEPESRHWLPGQAE---------WLVAWKYQPVAQVAEVKAIQFAVGKSGKI 327 DG+V + + L +AE W+VA+K++ +V I VGK+G + Sbjct: 318 DGLVFKV-------NNLALRAELGMTSKSPRWIVAYKWERYEAATKVLNITVQVGKTGVL 370 Query: 328 SVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER 387 + VA L PV + V R ++ + + + GD ++V AG+ IP I R E Sbjct: 371 TPVADLEPVEIAGTTVSRSSLHNRDEIERLGLGVGDTVIVEKAGKIIPHI----VRVEEH 426 Query: 388 TKPTPPENRFNSLTCYFASDV----------------CQEQFISRLVWLGAKQVLGLDGI 431 +PT TC S + C +F L + ++Q + ++G+ Sbjct: 427 LRPTNTAPYRFPETCPECSTIVEQDEGGVYIRCPNINCPARFRESLRYFASRQAMDIEGL 486 Query: 432 G 432 G Sbjct: 487 G 487 >UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DNLJ_PSYA2 Length = 691 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 119/517 (23%), Positives = 208/517 (40%), Gaps = 76/517 (14%) Query: 41 IKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP--PLNGA-------- 90 +KQ + Y+ +ED YDQL L + + E D++ P P+N Sbjct: 36 LKQHNYAYYVLDNPILEDSEYDQLRRSLLELEE----EYPDLVQPDSPINQVGDMPLPAF 91 Query: 91 --VMHPVAHTGVRKMVDKNALSLWMRERSD----------LWVQPKVDGVAVTLVYRDGK 138 V H + + + + N L +MR +D ++ K+DG+AV+L Y GK Sbjct: 92 TQVTHDIPMLSLGNVFEYNDLRDFMRRVNDRLSVAQQSPEYEMELKLDGLAVSLKYVHGK 151 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQ--TVSGPLANSTLQGEIFLQREGHI------- 189 +A++RG+G GED TQ I +P + + ++GE+ + + G Sbjct: 152 FTQAVTRGDGQTGEDITQNAKTIRNMPLWLADAADIELLEVRGEVLMPKAGFERLNRLAA 211 Query: 190 -QQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWP------DGPQLMSDRLKELATA 242 +++ N R AG +RQ D S + +A+ D S L + Sbjct: 212 EKEEKTFANPRNAAAG-SLRQLDPSVAASRPLAFYAYSVNQGLLDTIDTQSAALAWIKDI 270 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPESRH--WLPGQAE 298 GF+++ V N E +A+LPF DG+V++ + +L + Sbjct: 271 GFSVSAV--EVVSNPREAQTYYESIIATRADLPFEIDGMVIKVNSLALQQQLGFLSREPR 328 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W A+K+ + + AI + VG++G+I+ V L PV + V V + + Q D Sbjct: 329 WATAYKFPAETVMTRLHAIDWQVGRTGQITPVGKLEPVKVGGVTVSNVTLHNFGEIQRLD 388 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISR-- 416 + GD + V AG IP++ VW P + C + +++ ++R Sbjct: 389 VRAGDMVSVHRAGDVIPKVTR-VWHEQRPENSEPVQLPSTCPVCDSPVVLPKDEALARCT 447 Query: 417 ------------LVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN--- 461 L+ +++ + +DG+G A W FEH + QL N Sbjct: 448 GGLFCPAQQQEALIHFVSRRAMDIDGLG-ASWL----ISFFEHGLVKTVADIYQLHNHQE 502 Query: 462 ---TPGIAKSKSAQ-LWHQFNLARKQPFTRWVMAMGI 494 T KS Q + ++ +R++ A+GI Sbjct: 503 ELVTLEKLGEKSVQNIISAIEASKHTTLSRFIYALGI 539 >UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_ACTMD Length = 816 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 125/530 (23%), Positives = 209/530 (39%), Gaps = 68/530 (12%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-GSEPRDVMMP 85 PA A++ L ++++ Y+ + DG +D L L + G D Sbjct: 43 PADARDRHRALAEEVRGHQFRYYVLDAPTISDGEFDALLRELQSLEDAHPGLATPDSPTQ 102 Query: 86 PLNG-------AVMHPVAHTGVRKMVDKNALSLWM----RERSD---LWVQPKVDGVAVT 131 + G AV H + D++ L W +E D + KVDG+A+ Sbjct: 103 QVGGTFSTEFTAVDHLERMLSLDNAFDEDGLRAWFERVGKEVGDAARYLCELKVDGLAIN 162 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----PLANST-LQGEIFLQRE 186 L Y G+L +A++RG+G GED T + + VP+ ++G P+ ++GE++ E Sbjct: 163 LRYERGRLVRALTRGDGRTGEDVTLNLRTLRDVPEVLTGTDEWPVPELVEVRGEVYFAVE 222 Query: 187 GHIQQQMGGINARAKVAGL------------MMRQDDSDTLNSLGVFVWAWPDGP----- 229 ++ +NA+ AGL +RQ D S + + G Sbjct: 223 DFLE-----LNAKLVEAGLPPFANPRNTAAGSLRQKDPKVTASRRLRMVCHGIGKRAGFE 277 Query: 230 -QLMSDRLKELATAGFTLTQTYTRAVKNADEV-ARVRN-EWWKAELPFVTDGVVVRAAKE 286 + SD L G T +T V DEV ARV + + + DG+VV+ + Sbjct: 278 LERQSDAYAALRAWGLP-TSEHTAVVATFDEVWARVAHWGEHRHDAAHEIDGLVVKVDEV 336 Query: 287 PESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 P R W +A+KY P + I VG++G+++ A + PV + V Sbjct: 337 PLQRRLGSTSRAPRWAIAFKYPPEEATTTLLDIGVQVGRTGRVTPFAIMEPVKVAGSTVA 396 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPR-----IDDVVWRGAERTKPTPPENRFNS 399 R + + + + GD+I++ AG IP +D E P ++ Sbjct: 397 RATLHNASEVKRKGVLIGDRIVIRKAGDVIPEVLGPVVDVRPADAREFVMPASCPECGHA 456 Query: 400 LTCYFASDV---------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 L DV C Q RL +L ++ L ++ +G G AL + + + Sbjct: 457 LRPMKEGDVDIRCPNAEGCPAQLRERLAYLASRSALDVEVLGYEGAAALASSEVYGNEAD 516 Query: 451 WLLLTPEQL------QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 LT E L +N G + A+L A+ QP R ++A+ I Sbjct: 517 LFDLTAEDLLRVDLFRNQDGALVTNGAKLLENLEAAKSQPLWRVLVALSI 566 >UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XGZ1_9BACT Length = 680 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 135/593 (22%), Positives = 235/593 (39%), Gaps = 94/593 (15%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-------------G 76 A+ ++L ++I+ D+ Y+ E K + D YD+L L ++ F Sbjct: 6 AKTRHTQLVEEIRGHDNAYYVEAKPTISDQAYDRLYHELLDLEKKFPDLITSDSPSQRVS 65 Query: 77 SEPRDVMMPPLNGAVMHPVAHT----GVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTL 132 EP P + + M + +T VR V + L E + ++PKVDGVA+ L Sbjct: 66 GEPLKEFKPVHHLSPMMSLDNTYSQQDVRDFVGR-VQRLLPNETLEWILEPKVDGVAINL 124 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS--------TLQGEIFLQ 184 Y G +RG+G G+D T + I ++++G L S ++GE++L Sbjct: 125 KYEKGVFVCGATRGDGTTGDDVTSNLKTI----RSIAGKLKASGRKLPDVVEIRGEVYLP 180 Query: 185 REGHIQQQMGGI--------NARAKVAGLMMRQDD--------SDTLNSLGVFVWAWPDG 228 + + + N R AG + + D + LGVF A + Sbjct: 181 KAAFTKINAERVAAGEEPFANPRNSAAGSLKQLDPRIVAKRPLDVIVYGLGVFEGA--ER 238 Query: 229 PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVR---- 282 P+ + L L +AG T T +ADE+ NE + + + TDG V++ Sbjct: 239 PKEHDEVLAWLKSAGCK-TPEKTWKCCSADELIDAINELDQLRRKFTYETDGAVIKLNSF 297 Query: 283 AAKEPESRHWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 A +E R +A W +A+KY ++KAI VG++G ++ VA L PV L Sbjct: 298 ALRE---RIGFTSKAPRWAIAYKYAAEQAETKLKAITIQVGRTGALTPVAELEPVFLAGS 354 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLT 401 + R + + + DI GD + + AG+ IP + VV TK T E +F T Sbjct: 355 TISRATLHNEDELRRKDIRVGDTVTIEKAGEVIPAVVGVVL-----TKRTGKEVQFQFPT 409 Query: 402 -------------------------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 C A+ C Q R+ A+ + ++G GEA Sbjct: 410 HCPECGSKVARTEGTENGAAGVVWRCLNAA--CPAQIRGRIEHWCARGAMDIEGGGEALV 467 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 L + LT +Q+ + + + ++ + R + +GI Sbjct: 468 SQLVTKGLVREVSDLYSLTLDQVAGLERMGEKSAQNFLDGVQASKTRDMWRLLFGLGILH 527 Query: 497 TRAALNASDERSWSQL--LFSTEQF-WQQLPGTGSGRARQVIEWKENAQIKKL 546 A + R ++ L +F+ Q ++ G A +++W + + ++L Sbjct: 528 VGAGVAKRLGRRFTTLDDIFAASQEQLTEVEDIGEVIAHSIVQWHQEPKNREL 580 >UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL Length = 673 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 116/528 (21%), Positives = 219/528 (41%), Gaps = 69/528 (13%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQ------------- 72 PA+ E+ L+++++ + Y+ E+ D YD + L + Sbjct: 6 DPAKQAED---LREKLRYHEHRYYVLDDPEISDADYDVMMNELKALEAKHPELLTPDSPT 62 Query: 73 RCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW--------VQPK 124 + G +PR+ + V H + ++ L W R +L + K Sbjct: 63 QRVGGKPREGFV-----KVAHSAPMLSLDNAYNEEELRDWARRVEELSGKAEIEYECELK 117 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-------LANSTL 177 +DG+++ L Y+D + A++RG+G GED T + + +VP VS L + + Sbjct: 118 LDGLSMALRYQDARFVLAVTRGDGSIGEDVTLNLRTVKSVPLGVSSATLKKTHMLGDFEV 177 Query: 178 QGEIFL-------QREGHIQQQMGGI-NARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG 228 +GE+ E +Q + N R AG + + + T L + + Sbjct: 178 RGEVIFPTKSFEKMNEDREKQGLAKFANPRNAAAGAVRVLEPNITAQRRLDFYAYFLLVD 237 Query: 229 PQLMSDR----LKELATAGFTLTQTYTRAV-KNADEVARV--RNEWWKAELPFVTDGVVV 281 ++ DR L L GF + RAV K+ D+V + + E + +LP+ DGVV+ Sbjct: 238 GRVHIDRQSEALDTLEKLGFKVNS--NRAVFKSIDDVLKFIHKKEEDREKLPYEIDGVVI 295 Query: 282 RAAKEPE-SRHWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 + R G+A W +A+KY A V +V+ I VG++GK++ VA+L PV + Sbjct: 296 KVNSTALWQRLGFTGKAPRWAIAYKYAARAAVTQVEDILVQVGRTGKLTPVAALKPVPIG 355 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-----RGAERTK--PTP 392 V R + ++ + GD + V G IP++ V+ RG ++ K Sbjct: 356 GTTVSRATLHNMDEIDRLGLLIGDWVQVERGGDVIPKVVKVIDDKDHPRGKKKFKMPERC 415 Query: 393 PENRFNSLTCYFASD------VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 PE + + +D C + ++ ++ V+ ++G+G++ L + Sbjct: 416 PECGGHVVRTEGEADHRCVNANCPAKLRESILHFASRGVMNIEGMGDSLVNQLVDRGLVK 475 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 ++ L E+L + + K + + + +K P R + +GI Sbjct: 476 NVADIYELDEEKLLSLERMGKKSAQNILDEIKGTKKLPLERVIYGLGI 523 >UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL Length = 664 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 100/450 (22%), Positives = 188/450 (41%), Gaps = 29/450 (6%) Query: 121 VQPKVDGVAVTLVY-RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQG 179 V K DG+ V Y +G L K+ +RG G+ GED T ++ I VP + + G Sbjct: 119 VTKKFDGLTVNCTYDENGILIKSATRGTGIIGEDITAQIKTIKTVPLKIKNSYV-IEVHG 177 Query: 180 EIFLQR----EGHIQQQMGGINARAKVAGLMMRQDDSDTLN-SLGVFVW--AWPDGPQLM 232 E + + E + Q+ N R AG + D +T +L F + + +GP+ Sbjct: 178 EAIMTKTAFEEYNKAAQVPLKNLRNGAAGALRNLDIKETARRNLSAFFYDVGYNEGPEFK 237 Query: 233 SDRLKELATAGFTLTQ-TYTRAVKNADEVARVRN--EWWKAELPFVTDG--VVVRAAKEP 287 S R L Q Y + N +EV + E + EL + DG +VV K Sbjct: 238 SYREMMNFIRNMGLPQDKYIKECTNMEEVEKEIEYIESIRGELDYDIDGAVIVVDDIKTR 297 Query: 288 ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 E + +W +A+K++ ++ +++ VG+SG+++ A L PV L V+R Sbjct: 298 EILGYTIKFPKWAIAYKFEAKEITTKLLDVEWNVGRSGRVTPTALLEPVELGGVTVKRAT 357 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRF---------N 398 + ++ + ++ G ++LV + IP I VV E ++ +R N Sbjct: 358 LNNMDDIKRKNVKLGAKVLVRRSNDVIPEIMGVVEESLEESEEIQAPDRCPYCNSHLVQN 417 Query: 399 SLTCYFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 + Y + + C+ Q + +V +++ + + G E L + + I + E Sbjct: 418 GVHYYCENTLSCKPQMVKSIVHFASREAMNIAGFSEKTAEQLFEKLDIKSIADLYKIKKE 477 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDE----RSWSQLL 513 +L KS L ++ ++ A+GIP A+D ++ + Sbjct: 478 ELLTLEKFKDKKSQNLIDAIQNSKNCDLASFIYALGIP-NVGKKTANDLVMKFKTLESIK 536 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQI 543 +T + ++P G A+ + ++ E+ +I Sbjct: 537 NTTIEQLVEVPDVGEIVAKSIYDFFEDEKI 566 >UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL Length = 681 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 103/509 (20%), Positives = 220/509 (43%), Gaps = 42/509 (8%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVM 83 S A++ I++L +I+ Y+ + + E+ D +DQL RL + F + +D+ Sbjct: 11 TLSEKEAKKVIAKLADEIRHHQYLYYVKNQPEISDFDFDQLFKRLRDLEEEF-PQFKDLN 69 Query: 84 MPPL---------NGAVMHPVAHTGVRKMVDKNALSLWMRERS--DLW-VQPKVDGVAVT 131 P L H + + + + L W+ + L+ V+ K+DG ++ Sbjct: 70 SPTLVVGSDLDKDFEKFQHKLPVLSLINTYNDDELLDWVNKTDPDGLYSVEWKIDGASIV 129 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG--HI 189 L Y +G L ++RG+G G+D T + + +P + P+ L+GE+F+ + Sbjct: 130 LYYENGMLKNGVTRGSGGIGDDVTDNIRTVRNIPLRLPEPIT-VYLRGEVFMTFKDFEEF 188 Query: 190 QQQMGG--INARAKVAGLMMRQDDSDTLNS-LGVFVW--AWPDGPQLMSDRLKELAT-AG 243 + G N R AG + +++ +DT L +F + +P + + L+ Sbjct: 189 NELSSGKYANPRNLSAGSIKQKNSADTAKRPLRIFTYDATFPGFTKKFKTHQQILSKLEK 248 Query: 244 FTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVRA--AKEPESRHWLPGQAEW 299 T N ++A ++ K + L F TDG+V++ + +++ + W Sbjct: 249 LTFPVPPDTVFVNGSKIAETIKDFKKKKDTLGFPTDGLVIKLNDISKRDAQGYTSHSPRW 308 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 A+K+ + + + + I +AVG++GKI+ + PV L V + + E + Sbjct: 309 ARAYKFDAIMKESRIVDITYAVGRTGKITPRVEIEPVNLAGTTVTFATLHNQDYIDELGV 368 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAE-----------RTKPTPPENRFNSLTCYFASDV 408 G + V+ G+ IP +++V+ G + +TK EN + L C + Sbjct: 369 GIGAIVRVAKRGEIIPAVEEVITPGKDVFKIPDYCPSCKTKTIKKENLVD-LFC--PNPD 425 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIA 466 C ++ + +++ ++ + ++G+G+ L+ I L E+L G Sbjct: 426 CPDRVKNGIIFYCQRKQMDIEGLGDKQIEFLYDHGYIRSIADLYDLKDQKEKLIEEEGFG 485 Query: 467 KSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 + A +++ ++++ F + ++G+P Sbjct: 486 EKSLAIIFNGIEHSKQKDFRFLLPSIGLP 514 >UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_ANAPZ Length = 677 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 115/536 (21%), Positives = 209/536 (38%), Gaps = 61/536 (11%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYD--------------QLSARLTQWQRCF 75 ++ ++ L Q+K D Y + E+ D YD +LSA ++ Sbjct: 6 SRRRLADLNAQLKLHDVLYHEHDAPEISDAQYDALVQEKRELLEKFPELSA-YNDYEGVI 64 Query: 76 GSEPRDVMMPPLNG-----AVMHPVAHTGVRKMVDKNALSLWMRERSDLWV--QPKVDGV 128 G+ D +P + ++ + V K + + SL M + + +PK+DG+ Sbjct: 65 GALTVDARLPKIAHREPMLSLENSFTIQDVEKFISRVKRSLNMDPEVSITIACEPKIDGL 124 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG- 187 + +Y G L + +RGNG GED T +I +P ++ ++GEI++ Sbjct: 125 SFAALYEKGSLIRVATRGNGHLGEDITNTAKVIRKLPHKIANAPEVLEVRGEIYMHHSDF 184 Query: 188 -HIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDR---LKELATAG 243 ++ N R AG +RQ + + A+ ++ + LK+LA G Sbjct: 185 EKLKDVCNFANPRNAAAG-SIRQLNPKIAEERNLRYVAYCIVNSALASQEAILKQLAEWG 243 Query: 244 FTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPESRHWLPGQAE--- 298 F T T N D+ + ++ L + DG+V + + + L ++ Sbjct: 244 FC-THTEVLFADNMDDALSFHTRMYNTRSTLGYDIDGIVYKV-NDTHLQKLLGSTSKYPR 301 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W A K+ + +++ I VG++G I+ +A L P+ + V R ++ ++ D Sbjct: 302 WATAHKFPSTEAITKLRDISVQVGRTGVITPIAELEPINIGGTLVSRASLHNLNEIARKD 361 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS-----------------LT 401 I GD ++V AG+ IP++ V A P E F S + Sbjct: 362 IRIGDSVIVKRAGEVIPQVVG-VDHTARCNSAVPEEYVFPSHCPSCGSTLSRAPGEVAMR 420 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE---- 457 C A CQ Q + R+ ++ L + G+GE ++ L + Sbjct: 421 CT-AELSCQAQVLERVKHFVSRDGLNIVGLGEKQIEFFCNASYISNVADIFSLREKISHM 479 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWS 510 L G + A L + N + + ++ A+GI A L A RS+S Sbjct: 480 NLSAEHGWGEKSIALLINAINASTTVKLSNFIFALGIRFIGKGAAKLIAEHYRSYS 535 >UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB Length = 676 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 112/504 (22%), Positives = 196/504 (38%), Gaps = 65/504 (12%) Query: 48 YWKEGKSEVEDGVYDQLSARLTQWQRCF-------------GSEP--------RDVMMPP 86 Y+ + K V D +D L + +R + G +P V M Sbjct: 24 YYDKNKPIVSDQEFDLLKKDIIDLERKYKFLKSEYSPTKSIGFKPSKNFQKIKHKVPMLS 83 Query: 87 LNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRG 146 L A +K++ N LSL + +PK+DG++ +L+Y DGKL K +SRG Sbjct: 84 LGNAFNEEDLKNFEKKII--NFLSLKDVNTIEYSAEPKIDGISASLIYIDGKLTKGLSRG 141 Query: 147 NGLKGEDWTQKVSLISAVPQ--TVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAG 204 +G +GED TQ + I +P T S ++GE+F++ + + N R +G Sbjct: 142 DGNEGEDITQNLKTIKDIPLEITKSNFPKEIDIRGEVFIENNDFKKIKDKFANPRNAASG 201 Query: 205 LMMRQDDSDTLNSLGVFVWAWPDGPQL------MSDRLKELATAGFTLTQTYTRAVKNAD 258 +RQ +S + + A+ G + + L+ L GF T + + + Sbjct: 202 -SLRQKNSLITAKIPLKFIAYTYGYEKKMNIKNQTSFLENLKLWGFK-TNPFNKKIIGVK 259 Query: 259 EVARVRNEWW--KAELPFVTDGVVVRAAK-EPESRHWLPGQA-EWLVAWKYQPVAQVAEV 314 + E + EL F DG+V + + + R A W +A K+ + ++E+ Sbjct: 260 NLMLNHKELEEKRKELAFDIDGIVYKVNDFDLQKRLGFAANAPRWAIAHKFSANSSISEI 319 Query: 315 KAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGI 374 I+ +G++G ++ VA + PV + V + + DI GD + V AG I Sbjct: 320 MNIEIQIGRTGALTPVAKIKPVNIGGVIVSNATLHNEDEIVRKDIRVGDTVTVERAGDVI 379 Query: 375 PRIDDVVWRGAERTKP------------TPPENRFNSLT--------CYFASDVCQEQFI 414 P + V + ++ + +N T C C++ I Sbjct: 380 PHVVSVDLKKRKQNSKKFIFPLKCPSCGSKTIKDYNETTKRQDAVRRCASEGFECEKIAI 439 Query: 415 SRLVWLGAKQVLGLDGIG----EAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKS 470 R+ +K +DG G E W L + IF L +++ G K Sbjct: 440 ERIKHFVSKDAFNIDGFGKKIVENFWN-LKLVRLPQDIFK---LNYNKIEELEGWGKLSV 495 Query: 471 AQLWHQFNLARKQPFTRWVMAMGI 494 A L + R++ ++GI Sbjct: 496 ANLRFSIEEKKNISLERFIYSLGI 519 >UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI Length = 699 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 121/540 (22%), Positives = 218/540 (40%), Gaps = 93/540 (17%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLS-------------ARLTQWQRCF 75 A++ + L +++++D Y+ + V D YD L A + + Sbjct: 18 HAKKIVDFLALELQKYDQAYYSDNNPLVTDAQYDVLKNLNNKIVAKFPHLALVNDHSKKV 77 Query: 76 GSEP-----RDVMMPPL----NGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVD 126 G P + V + P+ NG + +++ + K L + + + K+D Sbjct: 78 GFTPSAQFSKVVHLKPMLSLANGFCVEDISN-----FITKIQNFLKIDHCPKIVCEYKID 132 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQ 184 G++ Y G L A +RG+G GE+ T+ + I + PQT+ P+ + + GEI++ Sbjct: 133 GLSFNARYEYGVLTLASTRGDGQIGENITENLKTIQSFPQTL--PITDKVFEVRGEIYIT 190 Query: 185 ----REGHIQQQMGG----INARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD--GPQLMS 233 R +IQQQ G N R AG + + D + T L FV+A + S Sbjct: 191 NNDFRVLNIQQQKLGKALFSNPRNAAAGSIRQLDPAITAQRPLKYFVYALGEVTNHHFAS 250 Query: 234 ---DRLKELATAGFTLTQTYTRA------VKNADEVARVRNEWWKAELPFVTDGVVVRAA 284 + L++L+ F++ Y + ++ + VA RN L F DGVV + Sbjct: 251 TQFELLQKLSQLKFSVNTDYILSDNLHSMIEFYNNVATERNN-----LAFEIDGVVYKVN 305 Query: 285 KEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 E + +A+K+ + ++ I VGK+G ++ VA L P+ + Sbjct: 306 DFALQERLGATSTSPRFAIAYKFPALIGRTKITNITLQVGKTGAVTPVAWLIPINIAGVT 365 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-----RGAER-----TKPTP 392 + R + + + + DI GD + + AG IP+I+ V + +ER T P+ Sbjct: 366 ISRATLHNKQEIESKDIRIGDYVFLHRAGDVIPKINGVDLSARDTQSSERFIFPTTCPSC 425 Query: 393 PENRF-----------NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 +N NSL CQ Q R+ +K L +DG+G+ + L Sbjct: 426 NQNLVVNEGETVARCGNSLA-------CQAQIYERICHFVSKDALNIDGLGKQRIQFLLD 478 Query: 442 THRFEHIFSWLLLT-------PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 +I LL +L++ G +L+ N A+ +++ A+ I Sbjct: 479 NKYIVNIVDIFLLEENNKFLYSNKLEDIAGWGIKSVNKLFQNINQAKNVILDKFIYALAI 538 >UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWP3_9BACE Length = 656 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 116/505 (22%), Positives = 211/505 (41%), Gaps = 54/505 (10%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAV 91 E + L Q IK+ D+ Y+K + D YD+L L +R G+ ++G V Sbjct: 5 ERMRELIQTIKEADEAYYKYDAPIMADLDYDRLYDELAALERETGTILSSSPTQRVSGEV 64 Query: 92 MHPVAHTGVR-----------KMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLN 140 + + T VR K V L E W K+DG+ + L Y +GKL Sbjct: 65 LESL--TAVRHSRPMLSADKCKSVADIHKYLGGHEAVLSW---KLDGLTLVLRYENGKLV 119 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFLQ-REGH-IQQQMGGI 196 +AI+RG+GL+GED T V ++ VP + PL ++GE + +E H + + Sbjct: 120 QAITRGDGLQGEDVTHTVRIMKNVPLVIPCKEPLE---VRGEGVISWKEFHALNGTLDEP 176 Query: 197 NARAK-VAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDR---------LKELATAGFTL 246 A + +A +R+ +++ + G+ A+ L+SD L+ LA GFT Sbjct: 177 YAHPRNLAAGSVRKLNAEEVRERGLSFMAF----DLISDNLGGSTKWETLRFLAQMGFTT 232 Query: 247 TQTYTRAVKNADEVARVRNEWWK-AELPFVTDGVVVRAAKEPESRHW-LPGQAE-WLVAW 303 A ++E R ++++ E + TDG++ R G E + A+ Sbjct: 233 VGYSILAAGASEEAVRQAMDFYQPKEYAYPTDGLIFEFNDLAYGRSLGATGHHENRMTAF 292 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 K+ + + ++ A ++G IS+ A+ V++D V + ++ + + PGD Sbjct: 293 KWPDTRYETKFRRLEVATTRTGMISLTAAFDDVVIDGTTVNHAYLHNLDNFTRLALGPGD 352 Query: 364 QILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC----------YFASDVCQEQF 413 I V A IP+I + + P ++L Y ++ C + Sbjct: 353 TISVYKANMIIPQIAENKTKSGGCPLPDVCPCCGSTLVVRQSSGGTRQLYCENEACPARL 412 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQ---THRFEHIFSWLLLTPEQLQNTPGIAKSKS 470 + + V +K + + G+ E Q + ++ L E++ TPG + Sbjct: 413 VRKFVHFCSKTRMEIKGLDEQTLTTFVQHGWVKNYGDLYE-LERHKEEILKTPGFGEKSF 471 Query: 471 AQLWHQFNLARKQPFTRWVMAMGIP 495 A+L + + R +++ A+GIP Sbjct: 472 ARLQNAVDERRTCTLNQFIAALGIP 496 >UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ6_CRYCD Length = 725 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 123/531 (23%), Positives = 210/531 (39%), Gaps = 78/531 (14%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN----- 88 I L+++I+ Y+ + + D +D L L Q + E D P Sbjct: 19 IEALRREIEHNSWLYYAQDAPAISDAAFDSLMRELRQLE-AEHPEFYDPTSPTQRVGGYV 77 Query: 89 ----GAVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVAVTLVYRDG 137 AV H + +D + L WM + L + K+DG + + Y DG Sbjct: 78 GEQFAAVTHAERMYSLDNAMDLDELDAWMDRTFEALGTDVPLCCELKIDGSGIAVTYEDG 137 Query: 138 KLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS--------TLQGEIFL------ 183 +L +A +RG+G+ GED T + + VP + ++ L+GE+++ Sbjct: 138 RLMRAATRGDGVVGEDVTANIRTVRDVPLRLRAEALDALTDVEEALELRGEVYMPKKSFN 197 Query: 184 ------QREGHIQQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQLMS--- 233 REG +Q+ N R AG + ++D + T L F +A L Sbjct: 198 ALNAAADREG--RQEFA--NPRNAAAGSLRQKDPTITAQRDLSTFTYATASNAALTLPGQ 253 Query: 234 -DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK-EPES 289 + L+ + AGF + R + DEV E + LP+ DGVVV+ + Sbjct: 254 WELLEWMRNAGFHVNPD-VRLCHSRDEVRAFCKEALDKRQSLPYEIDGVVVKVNDFSLQD 312 Query: 290 RHWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 R +A W +A+K+ P + ++ I VG++G ++ VA L PV + V R + Sbjct: 313 RLGFTARAPRWAIAFKFPPEEKTTLLRDITVQVGRTGALTPVAELEPVSVSGSVVSRATL 372 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRI----------DDVVWRGAERT----KPTPPE 394 + + D+ GD ++V AG IP + D W P E Sbjct: 373 HNEDEVRRKDVRVGDTVIVRKAGDVIPEVLGPVLSLRPADAQPWHAPTSCPSCGSPVVRE 432 Query: 395 NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 L C S C Q RL+ ++ L ++G+GE L ++ R + + L Sbjct: 433 EGGAILRC--VSLDCPAQAHERLIHWASRGALDIEGMGEEVIGRLLESGRVVDVADYYHL 490 Query: 455 TPEQLQ-------NTPG----IAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 T L N G + + +A++ Q + ++ + F R + +GI Sbjct: 491 TEYDLATLDMGRVNKDGEAIHLGSTVAAKIVGQIDQSKHRGFARVLFGLGI 541 >UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNLJ_TROWT Length = 628 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 128/563 (22%), Positives = 226/563 (40%), Gaps = 116/563 (20%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAV-- 91 I L QI Y++E S + D YD L L + G R+ P L + Sbjct: 12 IELLTAQIIAARKAYYQENTSLMSDVEYDALEHELKDAEHAKGFSDRN--SPSLTVGIAA 69 Query: 92 ----MHPVAHTGVRKMVDKNALSL-----WMR---------ERSDLWVQPKVDGVAVTLV 133 PV H +D N SL W ++ + K+DGV V+L Sbjct: 70 QLNLFEPVKHIEPMLSLD-NVFSLDQLHSWYEKTKKICPEGDQCTFVCELKIDGVGVSLR 128 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH----- 188 Y +G L A +RG+G GED TQ + + ++P ++ P ++GE F++R+ Sbjct: 129 YANGYLISAATRGDGAIGEDITQNMLYVPSIPPRIALP-GIFEIRGEAFIKRDEFDRINQ 187 Query: 189 --IQQQMGGINARAKVAGLM------MRQDDSDTLNSLGVF-VWAWPDGP-QLMSD---- 234 +++ N R V+G + MR +S + + G V+ + G L SD Sbjct: 188 LSLERSKQFANPRNFVSGCIRTKTPNMRYLESISFYAHGFTQVYGYTSGGMNLHSDITAS 247 Query: 235 ----------------RLKELATAGFTLTQTYTRAVKNADEV-ARVRN-EWWKAELPFVT 276 RL E +Y R N E+ + + N + +P+ Sbjct: 248 GGVKTEIEHGMFSAYSRLSECKIP----VNSYNRLCTNFSEIESYIENIRLNRQCVPYAI 303 Query: 277 DGVVVRAAKEPESRHWLPGQA----EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVAS 332 DG+VV+ + + L G W VA+K+ + V + I+ +VG++G+++ A Sbjct: 304 DGIVVKI--DSLQKQALLGSTTKAPRWAVAYKFPSESTVTRLLDIEVSVGRTGRVTPYAV 361 Query: 333 LAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI----------DDVVW 382 L P+ LD +V R + + + + D+ GD + + AG +P + +V++ Sbjct: 362 LQPIQLDGSEVSRATLHNQKVIGDKDLLIGDYVRIRKAGDIVPEVLCALPEKRDGSEVLF 421 Query: 383 R--------GAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEA 434 + GAE P + L C C Q RL ++G++ VL + + E Sbjct: 422 KMPSLCPSCGAEL---MPSKLGDIDLRCPNMQS-CLVQLAGRLEYIGSRGVLDIAYLAEE 477 Query: 435 GWRALHQTHRF-------------------EHIFSWLLLTP--EQLQNTPGIAK-SKSAQ 472 AL +F E ++ + +P ++ + PG + +KSAQ Sbjct: 478 NAYALSHLRKFGKSAEVQLFKITIDDLVALEFMYKGNMRSPFRKKGDSFPGFEEPTKSAQ 537 Query: 473 -LWHQFNLARKQPFTRWVMAMGI 494 + A++ P ++++A+ I Sbjct: 538 DMVDSIERAKRSPLWKFLLALNI 560 >UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_ALCBS Length = 777 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 113/513 (22%), Positives = 201/513 (39%), Gaps = 61/513 (11%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDVMMPPLNG- 89 L+ Q+ W Y+ + V D YD++ L + + S + V PL+ Sbjct: 14 LRDQLNDWSYRYYVQDDPAVPDAEYDRVFRALKDLEAQYPDLVTADSPTQRVGDVPLDAF 73 Query: 90 -AVMHPVAHTGVRKMVDKN---ALSLWMRERSDLW------VQPKVDGVAVTLVYRDGKL 139 V H V + D A +RER D+ +PK+DG+AV+L+Y +G+L Sbjct: 74 EQVQHEVPMLSLDNAFDDEELWAFDKRIRERLDVSEIIDYVAEPKLDGLAVSLLYENGEL 133 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREG----HIQQQM 193 +A +RG+G GE+ T I +VP + G L+ GE+ + G + +QQ Sbjct: 134 VRAATRGDGQTGENITVNARTIRSVPLKLRGNDVPKRLEVRGEVVMPHAGFEELNARQQE 193 Query: 194 GGI----NARAKVAGLMMRQDDSDTLNSLGVFVWAWP-------DGPQLMSDRLKELATA 242 G+ N R AG +RQ DS S + +A+ + P S L L Sbjct: 194 AGLKLFANPRNAAAG-SLRQLDSRITASRPLEFYAYSMAQLEGWEHPPTHSAMLDALRDW 252 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP--ESRHWLPGQAE 298 G + R + + R + L + DGVV + + + ++ Sbjct: 253 GLRVNPE-IRVCHGVEALLRFYQGILEKREHLDYDIDGVVYKVNRFDWQDDLGFVSRAPR 311 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W +A K+ ++ + + + VG++G ++ VA L PV + V + ++ Q D Sbjct: 312 WAIAHKFPAQEELTVLNGVDWQVGRTGALTPVARLEPVHVGGVIVSNATLHNIDEIQRLD 371 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASD----------- 407 I GD ++V AG IP+ V R +P + +C Sbjct: 372 IRIGDTVVVYRAGDVIPK----VVRALPERRPANAQGIALPSSCPVCGSEILRGHDQVVA 427 Query: 408 ------VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 +C +Q + +++ + +DG+G+ AL + L EQ+ Sbjct: 428 RCTGGLICGDQRREAIKHFASRRAMDIDGLGDKLVDALVDQELITTVADLYRLKAEQVAG 487 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + + + L ++ R++ A+GI Sbjct: 488 LERMGEKSADNLIAALEASKTVGLGRFLFALGI 520 >UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI82_9DELT Length = 706 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 103/393 (26%), Positives = 163/393 (41%), Gaps = 50/393 (12%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-------GSEPR--------D 81 L I++ + +YW + D VYD+L L + + P Sbjct: 35 LAALIRRTNHEYWNLHAPTIPDPVYDRLVEGLRRLDPAHPVLDELGEATPEGPVIEADAT 94 Query: 82 VMMPP---LNGAVMHPVAHTGVRKMVDKNALSLWMRE-RSDLWVQPKVDGVAVTLVYR-D 136 +PP L V H A + K L W + ++ V PK+DGVA +L Y + Sbjct: 95 ASIPPAERLGAPVRHTRAMLSLDKCYGPEDLYSWTEKFEGEVLVMPKMDGVACSLRYDAE 154 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL------------QGEIFLQ 184 GKL A +RGNG +GED T V + VPQ + P A + L +GE+F++ Sbjct: 155 GKLFLAATRGNGSEGEDITVNVLEVEDVPQQLD-PAAFAELPGPDGAAPAVEVRGELFMK 213 Query: 185 REGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGF 244 + + N R AG + ++ T F G +L ++R K F Sbjct: 214 LSVFERYKEQYSNPRNLTAGAIKHKERGKTKAYTLSFYAYDLQGTELPTEREK------F 267 Query: 245 TLTQTYTRAVKNADEVAR----VRNEWWKA-----ELPFVTDGVVVRAAKEPESRHW--L 293 + AV+ D V R E W A E+ + DGVV RA++ E R Sbjct: 268 ASLRALGFAVEECDFVPRGELQAAYERWSARRSADEIDYEIDGVVYRASEVAEQRRMGET 327 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W +A+K+Q ++ + ++V ++G I+ VA P+ L + R + ++ Sbjct: 328 GHHPRWSMAYKFQGDTGTTTLEEVLWSVSRTGTITPVAIFKPIELSGAMIARAGLFNLNH 387 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE 386 + E + G I V+ G IP ++ VV GAE Sbjct: 388 FDELGLTAGAAIEVTRRGGVIPYVERVVTPGAE 420 >UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G8_9ZZZZ Length = 707 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 121/539 (22%), Positives = 221/539 (41%), Gaps = 97/539 (17%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR--DVMMPPLNGA 90 E RL +I++ + Y+ + E+ D +D L RL + S P+ V P G+ Sbjct: 10 EADRLASEIQRHSELYYNYAEPEITDAQFDLLIQRLREID---PSNPQLEKVGADPAPGS 66 Query: 91 VMHPVAHTGVRKMVDK--------NALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKA 142 V V H +DK + +++ VQPK+DG A++L YR G L +A Sbjct: 67 VK--VEHIYPMLSLDKANTPQEIAHFVNITSAATQRFVVQPKLDGSAISLEYRRGMLVRA 124 Query: 143 ISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL----QREGHIQQQMGGINA 198 ++RG+G +GED T+ V I +P + N ++GE+ + RE + + N Sbjct: 125 VTRGSGTRGEDVTRNVRRIPNIPNRIKW-RGNCFVRGEVVMLLDTYRENYAEV---APNP 180 Query: 199 RAKVAGLMMRQDDSDT----LNSLGVFVW--AWPDGPQ----------LMSDRLKE-LAT 241 R AG +RQ + ++ L F + +P+G + ++ E L T Sbjct: 181 RNLAAG-ALRQKNPESGKARAEDLRFFAYDVKFPEGASGEESKAPLNYIHDSQILEWLFT 239 Query: 242 AGFTLTQTYTRAVKNADEVARV---RNE---WWKAELPFVTDGVVVRA---AKEP---ES 289 + ++DEV + + E + E+P+ DG+V++ K P E+ Sbjct: 240 MDIQPAGRFVVEADDSDEVIELLISKTEEAIGSREEMPWEIDGLVIKVDELTKRPLLGET 299 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 H W +AWK+ P V ++ + G++G ++ VA +APVM+ V+ + Sbjct: 300 AH----HPRWALAWKFPPEEATTVVMSVDWQTGRTGNVTPVARVAPVMVSGVTVENTTLH 355 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA--------------------ERTK 389 + + + GD++++ G IP+I V+ + ER Sbjct: 356 NPGEVERLGLKIGDRVMIVRRGDVIPKITKVIGQATGTDLEGRRHSDGTPFHEALPERID 415 Query: 390 PTPP------------ENRFNSLTCYFASDVCQEQFI-SRLVWLGAKQVLGLDGIGEAGW 436 PP E F L C + C + + S L W + L +DG+GE Sbjct: 416 VEPPSVCPRCGTNLHSEGAF--LKCRNSG--CPSRVVRSILYWC---KSLEIDGVGEKLA 468 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L ++ + L+ + + + + + ++ Q RK ++ ++G+P Sbjct: 469 NQLVESGLAPELADLYRLSHADVLSLERMGEKSARRVIDQIQSKRKMSLDHFIASLGLP 527 >UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NYF9_9DELT Length = 678 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 125/514 (24%), Positives = 205/514 (39%), Gaps = 71/514 (13%) Query: 41 IKQWDDDYWKEGKSEVEDGVYDQLSARL----TQWQRCFGSEPRDVMMPPLNGAVMHPVA 96 I + Y+ E+ DG YD+L L ++W ++ + PV Sbjct: 24 IAYHNHRYYVLDDPELSDGEYDRLFRELEELESRWPELVTADSPSRRVGGAAAEQFAPVR 83 Query: 97 HTGVRKMVDKNALS---LW-----MRERSDL-------WVQPKVDGVAVTLVYRDGKLNK 141 H V + +NA + L+ +R +L + +PK+DG+AV LVY G Sbjct: 84 HA-VPMLSLENAFAEAELYDFENRLRRFLNLDDQPIAYYAEPKLDGLAVELVYEQGFFTL 142 Query: 142 AISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL--QGEIFLQREGHI----QQQMGG 195 +RG+GL GE+ + + I +P + G A + L +GE+ L G Q+ G Sbjct: 143 GSTRGDGLVGENISANLKTIDDIPIRLRGEQAPARLDIRGEVCLTVAGFTALNEQRAQNG 202 Query: 196 ----INARAKVAGLMMRQDDS-DTLNSLGVFVWAWPDGPQLMSDR----LKELATAGFT- 245 N R AG + + D + L F + D L ++ LA GF Sbjct: 203 ESLFANPRNAAAGSLRQLDPAISAARPLEFFAYGVADADPLAVGSQQQVIELLAALGFKT 262 Query: 246 -----LTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAA-----KEPESRHWLPG 295 L + + ++A+ R+ +LP+ DG+V + K S+ P Sbjct: 263 IPHGHLCPDLAAVIAHFQQLAQRRS-----QLPYEIDGMVAKVNELALQKRLGSKTRTP- 316 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A K+ V + A+++ VG++G ++ VA L PV + V R + + + Sbjct: 317 --RWAIAAKFPAVQATTRLLAVEYQVGRTGAVTPVARLEPVTVGGVTVSRATLHNEAEIR 374 Query: 356 EWDIAPGDQILVSLAGQGIPRI-----DDVVWRGAERTKPTP-PENRFNSLTCYFASDV- 408 D+ D +LV AG+ IP + + R E T PT PE S A++V Sbjct: 375 RKDLRLEDTVLVQRAGEVIPEVVKPLAEKRNGRQREITLPTHCPE--CGSQLIRPAAEVV 432 Query: 409 --------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 C Q + L+ K L ++G+G+ L I L QL Sbjct: 433 LRCPNHRHCPAQRLRALIHFCGKAGLDIEGLGQKVLEQLTAAGLVGDIPDIFRLRAAQLA 492 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 PG + K+A + N R+ R + A+GI Sbjct: 493 PLPGWGEKKAANVIAAVNRRRRVELGRLLAALGI 526 >UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ_BIFLI Length = 921 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 88/364 (24%), Positives = 157/364 (43%), Gaps = 50/364 (13%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN----STLQG 179 K+DG+A+ L+YR+G L + ++RG+G+ GED T V I ++P + GP + ++G Sbjct: 175 KIDGLALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTIGSIPANLGGPKEDVPDFVEIRG 234 Query: 180 EIFLQ-REGHI---QQQMGG----INARAKVAGLMMRQDDSDT--------LNSLGVFVW 223 E+F++ + H +Q+ G N R AG + ++D T + LG W Sbjct: 235 EVFMRWDDFHTLNNEQEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGLGQLTW 294 Query: 224 AWPDGPQLMSDRLKELATAGFTLTQ------TYTRAVKNADEVARVRNEW--WKAELPFV 275 D P+ D + + + A T+ + RAV + E+ + + + ++ Sbjct: 295 GA-DHPRGTHDVVADQSQAYDLYTRWGVPVSPHNRAVTSFQEILDMIEYYGEHRGDIEHA 353 Query: 276 TDGVVVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DG+VV+ R W +A+KY P E+ I VG++G+++ VA L Sbjct: 354 LDGIVVKVDDLGLQRTLGATSRAPRWAIAYKYPPEEVNTELLNITVQVGRTGRVTPVAVL 413 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPR-IDDVVWRGAER----- 387 PV + V R + + + + GD ++V AG IP + V+ R R Sbjct: 414 KPVYVAGSTVARTTLHNGFEVKRKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREDQLR 473 Query: 388 ------------TKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG 435 K P + + C + C Q R++ L +++ ++ +GE Sbjct: 474 EFVMPEFCPSCGAKLAPAKEGDKDIRCPNV-ESCPAQLTERVISLASRKAFDIEHLGEQS 532 Query: 436 WRAL 439 AL Sbjct: 533 AIAL 536 >UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP Length = 765 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 131/536 (24%), Positives = 221/536 (41%), Gaps = 77/536 (14%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDVM 83 A+ E +RL +++ Q + Y++E + D YD RL + + F GS V Sbjct: 33 AEAEHARLSEEVAQANLAYYQEDAPFISDAEYDASKRRLEEIEARFPDLAHSGSPTAQVG 92 Query: 84 MPPLN--GAVMHPVAHTGVRKMVDKNALSLWM-RERS----------DLWVQPKVDGVAV 130 P V H + + + + ++ R RS ++ +PK+DG+++ Sbjct: 93 AAPDTRFAKVPHRLPMLSLENGFSQGDVEAFVQRVRSFLNLASGAPLEVTAEPKIDGLSL 152 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREGH 188 +L Y G+L +A +RG+G GE+ T I+ +P +SG L+ GE ++ E Sbjct: 153 SLRYEGGRLVQAATRGDGAVGENVTANARTIADIPGQLSGDGYPEVLEIRGECYMSHEDF 212 Query: 189 ---IQQQMGGI--NARAKVAGLMMRQDDSDT-LNSLGVFVWAWPD------GPQLMSDRL 236 Q + G + N R AG + + D S T L F +AW + G Q+ + + Sbjct: 213 EKLNQSETGRVFANPRNAAAGSLRQLDPSVTAARPLRFFAYAWGEVSASFAGTQM--EAV 270 Query: 237 KELATAGFTLTQTYTRAVKNADEVAR--VRNEWWKAELPFVTDGVVVRAAK-EPESRHWL 293 + + GF T TR + E+ E +A L + DGVV + ++R + Sbjct: 271 RRMQAFGFQ-TNPLTRICASVSEMLSAWAEIEQMRATLGYDIDGVVYKVNDLAYQARLGM 329 Query: 294 PGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVML------------DD 340 W +A K+ ++AI VG++G +S VA L PV + +D Sbjct: 330 RSTTPRWALAHKFPAERAWTRLEAIDIQVGRTGALSPVARLHPVTVGGVVVSNATLHNED 389 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKP-----TPPE 394 R GS R + DI GD + V AG IP++ DV + + +P T PE Sbjct: 390 YIAGRGADGSEIRGGK-DIRIGDWVEVYRAGDVIPKVADVDLAKRPSEAEPYAFPTTCPE 448 Query: 395 -------NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEA--------GWRA- 438 +S+ +C Q + +L ++ ++G+G GW A Sbjct: 449 CGSPAIREEGDSVRRCTGGLICPAQAVEKLRHFVSRAAFDIEGLGAKLVEELFRDGWIAE 508 Query: 439 LHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + + LT QL+N G + +A L+ R+ P R + A+GI Sbjct: 509 PADIFTLQDRYGPGQLT--QLKNREGWGEKSAASLFQAIEKRREIPLARLLFALGI 562 >UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B8R1_9ACTO Length = 777 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 88/363 (24%), Positives = 169/363 (46%), Gaps = 43/363 (11%) Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST- 176 ++ + KVDG+++ L+Y +G+L +A +RG+G GED T I+++PQT+SG + Sbjct: 116 EMTTEVKVDGLSINLLYENGRLVRAATRGDGYVGEDVTANARTIASIPQTLSGTVPTRIE 175 Query: 177 LQGEIFLQ-------REGHIQQ-QMGGINARAKVAGLMMRQDDSDT------LNSLGV-F 221 ++GE++ E ++ + +NAR AG + ++D ++T + + G+ F Sbjct: 176 VRGEVYFPVADFAAFNEARVEAGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVAHGIGF 235 Query: 222 VWAWPDGPQLMS-----DRLKE--LATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPF 274 V A D + ++ ++L++ L + +T T +A++ + +A + + + +L Sbjct: 236 VEAGEDFTEPITQMGWYEQLRDWGLPVSPYTRVLTGRKAIE--ERIAELGEK--RHDLEH 291 Query: 275 VTDGVVVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVAS 332 DGVVV+ R W A+K+ P + I+ VG++G+++ Sbjct: 292 EIDGVVVKINDLDLQRSLGSTSRTPRWAAAYKFPPEEVHTRLLDIRVQVGRTGRVTPYGV 351 Query: 333 LAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV---WRGAER-- 387 + V++ V R + + + + GD +++ AG IP I V G+ER Sbjct: 352 MESVLVAGSNVARATLHNAQEVARKGVLIGDLVVLRKAGDVIPEIVAPVEDARNGSERPF 411 Query: 388 TKPTPPENRFNSLTCYFASDV---------CQEQFISRLVWLGAKQVLGLDGIGEAGWRA 438 PT + +L DV C Q RL +GA+ L ++G+G+ A Sbjct: 412 VMPTECPSCGTTLVQEKEGDVDLRCPNKGLCPAQITERLAHVGARSALDVEGLGDESALA 471 Query: 439 LHQ 441 + Q Sbjct: 472 MTQ 474 >UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=DNLJ_BIFA0 Length = 863 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 85/364 (23%), Positives = 155/364 (42%), Gaps = 50/364 (13%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN----STLQG 179 K+DG+A+ L+YR+G L + ++RG+G+ GED T V I ++P + GP + ++G Sbjct: 161 KIDGLALNLIYRNGVLTQGLTRGDGVTGEDITMNVRTIHSIPTNLDGPEGDIPDMVEIRG 220 Query: 180 EIFL-----QREGHIQQQMGG---INARAKVAGLMMRQDDSDT------LNSLGVFVWAW 225 E+F+ + + G N R AG + ++D T + G+ W Sbjct: 221 EVFMRWDDFHKLNEANEDAGRPPFANPRNAAAGSLRQKDPRITAQRHLSFYAHGIGELVW 280 Query: 226 PDG-PQLMSDRLKELATAGFTLTQT-------YTRAVKNADEVARVRNEW--WKAELPFV 275 G P ++D ++ + A +T+ + + R V + D++ + + + ++ Sbjct: 281 GSGKPVDVADEVRNQSDA-YTMYRKWGVPISPHNREVTDFDQILDMIEYYGEHRGDIEHA 339 Query: 276 TDGVVVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DG+VV+ R W +A+KY P ++ I VG++G+++ VA L Sbjct: 340 LDGIVVKVDDLALQRRLGSTSRAPRWAIAYKYPPEEVNTKLLNIVVQVGRTGRVTPVAIL 399 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE------- 386 PV + V R + + + I GD ++V AG IP + V E Sbjct: 400 NPVYVAGSTVSRTTLHNAYEVKRKGILIGDTVVVRKAGDVIPELVGPVIAKREGHEQDLR 459 Query: 387 ------RTKPTPPENRF-----NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG 435 R R+ L C S+ C Q R++ L A++ ++ +G+ Sbjct: 460 EFVMPTRCPSCDTVLRYEKEGDKDLRCP-NSESCPAQLAERVINLAARKAFDIEHLGDQS 518 Query: 436 WRAL 439 AL Sbjct: 519 AVAL 522 >UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHH0_9CELL Length = 824 Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 99/360 (27%), Positives = 158/360 (43%), Gaps = 43/360 (11%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS----TLQG 179 K+DG+A+ L+Y G+L +A +RG+G GED T V IS +P + G A ++G Sbjct: 128 KIDGLAIALLYEKGRLVRAATRGDGRTGEDVTLNVRTISTIPDVLGGDPATHPDVIEIRG 187 Query: 180 EIFLQ----REGHIQQQMGG----INARAKVAGLMMRQDDSDT------LNSLGVFVWAW 225 E+FL R + Q G N R AG + ++D T + + G+ W Sbjct: 188 EVFLPVDAFRALNEAQVAAGRAPFANPRNAAAGSLRQKDPRVTAARPLRMYAHGIGALTW 247 Query: 226 PDGPQLMSDRLKELAT--AGFTL-TQTYTRAVKNADEV-ARVRN-EWWKAELPFVTDGVV 280 DG DR ++ AG+ + T T+TR V + DEV RV + + ++ DGVV Sbjct: 248 GDGRGTGIDRQSQVYDLLAGWGVPTSTHTRVVGSLDEVWDRVAHFGEHRHDVEHEIDGVV 307 Query: 281 VRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVML 338 V+ R W +A+KY P + AI+ +G++G+ + A + PV++ Sbjct: 308 VKVDDIALQRRLGATSRAPRWAIAYKYPPEEVNTRLLAIELGIGRTGRATPFAVMEPVLV 367 Query: 339 DDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI--------DDVVWR------- 383 V++ + + + + GD +++ AG IP I DD V R Sbjct: 368 AGSTVRQATLHNQDVVKVKGVRVGDMVVLRKAGDVIPEIVGPAPQAPDDDVPRVEWHMPA 427 Query: 384 -GAERTKPTPPENRFN-SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 E P P + L C A C Q RL +G++ ++ +GE AL Q Sbjct: 428 DCPECGTPLRPMREGDVDLRCPNAQG-CPAQVRGRLEHIGSRGAFDIEVLGEVTAAALTQ 486 >UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUF5_9FIRM Length = 671 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 76/297 (25%), Positives = 136/297 (45%), Gaps = 31/297 (10%) Query: 119 LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ 178 + K+DG+A+ L Y+DG + +RG+G GED TQ + I ++P + L+ ++ Sbjct: 112 FMCECKIDGLAIALTYQDGVFVRGATRGDGTIGEDITQNLRTIRSLPLRLRQNLS-VEVR 170 Query: 179 GEIF--------LQREGHIQQQMGGINARAKVAGLMMRQDDSDTL--NSLGVFVWAWPDG 228 GE + L E Q Q N R AG +RQ D + L +F+++ Sbjct: 171 GECYMPKAVFLALNEEREAQGQEIFKNPRNAAAG-GLRQLDPRAVADRQLNIFLYSA--- 226 Query: 229 PQLMSDRLKELATAGFTL--------TQTYTRAVKNADEVARVRNEW--WKAELPFVTDG 278 + +D + AG T R + A+EV + +LP+ DG Sbjct: 227 --VYTDEFHPESQAGLFAAFEQLGLRTNPLRRECQTAEEVIDYIQMIGQQRHDLPYEIDG 284 Query: 279 VVVRAAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPV 336 VV++ + ++ + W +A+K+ V ++ +++ VG++G ++ A + PV Sbjct: 285 VVIKVNHIDQQQALGFTVKAPRWAIAYKFPAEEAVTTLREVEWTVGRTGVVTPTAIMDPV 344 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP 393 L VQR ++ +V + D+ GDQ+ + AG IP I V+ A+R + + P Sbjct: 345 PLAGTTVQRASLHNVDLIESLDVRIGDQVTIHKAGDIIPEITSVLL--AKRPQDSQP 399 >UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_BIFAA Length = 892 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 86/363 (23%), Positives = 155/363 (42%), Gaps = 48/363 (13%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN----STLQG 179 K+DG+A+ L+YR+G L + ++RG+G+ GED T V IS +PQ ++GP + ++G Sbjct: 184 KIDGLALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTISTIPQNLAGPEEDIPEFVEIRG 243 Query: 180 EIF--------LQREGHIQQQMGGINARAKVAGLMMRQDDSDT--------LNSLGVFVW 223 E+F L E + N R AG + ++D T + +G W Sbjct: 244 EVFMRWDDFNKLNAENEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGIGSLRW 303 Query: 224 A---WPDGPQLMSDRLK--ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVT 276 +G +++D+ + EL + R V + E+ + + + + ++ Sbjct: 304 GAGHAGNGHDVVNDQSEAYELYKKWGVPVSPHNREVTSFKEILDMIDYYGEHRGDIEHAL 363 Query: 277 DGVVVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DG+VV+ R W +A+KY P E+ I VG++G+++ VA L Sbjct: 364 DGIVVKVDDLGLQRSLGATSRAPRWAIAYKYPPEEVNTELLDITVQVGRTGRVTPVAVLK 423 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPR-IDDVVWRGAER------ 387 PV + V R + + + + GD ++V AG IP + V+ R R Sbjct: 424 PVYVAGSTVSRTTLHNPFEVERKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREGELRR 483 Query: 388 -TKPT----------PPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 PT P + + C + C Q R++ L +++ ++ +G+ Sbjct: 484 FVMPTRCPSCGAELAPAKEGDKDIRCPNV-ESCPAQLTERIINLASRKAFDIEHLGDQSA 542 Query: 437 RAL 439 AL Sbjct: 543 IAL 545 >UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ Length = 817 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 104/414 (25%), Positives = 169/414 (40%), Gaps = 61/414 (14%) Query: 23 PAWSPARAQEEISR---LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP 79 PA P +R L+ ++ ++ +Y+ + V D YD+L L + +E Sbjct: 7 PASGPPSKDRPEARAAWLRAELNRYAHEYYVLDQPSVPDVEYDRLYRELEALE----TEH 62 Query: 80 RDVMMP------------PLNGAVMHPVAHTGVRKMVDKNALSLWMRERS---------- 117 ++ P P AV H + +R D A + S Sbjct: 63 PELKTPDSPTLRVGGAVLPEFAAVRHVIPMLSIRTETDTTANGARAFDASVRRELGLDDT 122 Query: 118 ----DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVP---QTVSG 170 + + K DG+A+ L Y G L +A +RG+G GED TQ + I +P V G Sbjct: 123 DPPVEYAAELKFDGLAINLRYERGYLVQAATRGDGTTGEDVTQNIRTIRQIPLGLSPVDG 182 Query: 171 PLANS-TLQGEIFLQREG----HIQQQMGG----INARAKVAGLMMRQDDSDTL--NSLG 219 + + ++GE++++R+ + +Q+ G +N R AG +RQ D L Sbjct: 183 HVPDVLEVRGEVYMRRDDFEKLNARQRERGDKTFVNPRNTAAG-AVRQLDPKMAAERPLS 241 Query: 220 VFVWA------WPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE-- 271 F + W P S L L GF ++ AV + + R +E +A+ Sbjct: 242 FFAYGLGEVAGWKGMPGTHSSMLDVLQAFGFPVSNERA-AVAGGEGLVRF-HEAIRAKRD 299 Query: 272 -LPFVTDGVVVRAAKEPESRH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKIS 328 LPF DGVV + R + + W VA KY + V++I VG++G I+ Sbjct: 300 SLPFDIDGVVYKVNSLALQRELGFRSREPRWAVAHKYPAQEALTTVESIDVQVGRTGAIT 359 Query: 329 VVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW 382 VA L PV + V + + + D+ GD ++V AG IP + VV Sbjct: 360 PVARLVPVFVGGVTVTNATLHNEDEVRRKDVRVGDTVIVRRAGDVIPEVVSVVL 413 >UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA Length = 707 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 132/599 (22%), Positives = 232/599 (38%), Gaps = 72/599 (12%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPR 80 PA E I+ L+ ++ Y+ + + D YD+L L + S + Sbjct: 17 PASVIERIAALRAELDLHAHRYYVLDEPSIPDAEYDRLFKELQALEAAHPELLTPDSPTQ 76 Query: 81 DVMMPPLN--GAVMHPVAHTGVRKMVDKNAL---SLWMRERSDLWVQP-----------K 124 V PL +V H + +R D A + R R +L ++ K Sbjct: 77 RVGGKPLGQFASVRHRIPMLSIRTETDTEATGARNFDTRVRKELGLKESDPPVEYVAELK 136 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG---PLANSTLQGEI 181 DG+A++L Y +G L +A +RG+G GED TQ + I +P + P+ ++GE+ Sbjct: 137 FDGLAMSLRYENGVLVQAATRGDGEVGEDVTQNIRTIRQIPLRLPADAPPVME--VRGEV 194 Query: 182 FLQREG----------HIQQQMGG----INARAKVAGLMMRQDDSDTLNSLGVFVWAWPD 227 +++R+ I + G +N R AG +RQ D + +A+ Sbjct: 195 YMRRDEFEALNERQREKIAKGAKGEKTFVNPRNAAAG-GVRQLDPAFAAERRLSFFAYGV 253 Query: 228 GPQLMSDRLKELATAGFTLTQTY----------TRAVKNADEVARVRNEWWKA--ELPFV 275 G + + F L QT TR A E+ + +LP+ Sbjct: 254 GEITPPEEGGPVFETHFELLQTLKSWCFPVAAQTRLAYGAPELIAFHEAIGRQRDQLPYD 313 Query: 276 TDGVVVRAAKEPESRH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DGVV + R ++ + W VA KY Q+ V AI VG++GK++ VA L Sbjct: 314 IDGVVYKVNSLALQRKMGFVSREPRWAVAHKYPAQEQLTTVLAIDIQVGRTGKLTPVAKL 373 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIP---------RIDDVVWRG 384 APV + V + + + D+ GD ++V AG IP R+ D Sbjct: 374 APVFVGGVTVTNATLHNEDEARRKDVRVGDTVIVRRAGDVIPEVVSVLLDKRVQDAPQFS 433 Query: 385 AERTKPTPPEN--RFNSLTCYFASD--VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALH 440 R P + R Y + C Q ++ K+ + ++G+G+ L Sbjct: 434 MPRQCPVCGSDAVREEGEADYRCTGGLFCAAQRKEAILHYAHKRAVEIEGLGDKLVEQLV 493 Query: 441 QTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA 500 T + L L + +A+ ++ L +++ R+V +GI A Sbjct: 494 DTGVIRTLPDLYRLGFTSLASLDRMAEKSASNLVAALEKSKQTTLPRFVFGLGIRHVGEA 553 Query: 501 LNASDERSWSQL---LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 + R + QL + ++E+ ++ G A+ + + E +++ L A +T Sbjct: 554 TAKALARHFGQLDSIMDASEEQLLEVADVGPIVAKSIRTFFEQPHNREVVEQLRACGVT 612 >UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R902_9FIRM Length = 664 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 115/530 (21%), Positives = 222/530 (41%), Gaps = 87/530 (16%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD--VMMPPL 87 +Q+ I L++ + + +Y+ K V D YD+ L + + F + RD + + Sbjct: 2 SQQRILELRKILDRLAYEYYVLDKPSVSDQEYDRYYQELLKLEDEF-PQYRDPNSITQRV 60 Query: 88 NGAVM---HPVAHTGVRKMVD-KNALSL----WMRER-------SDLWVQPKVDGVAVTL 132 G V+ V+H R+M+ NA +L ER + V+ K+DG+A++L Sbjct: 61 GGVVLDAFEKVSHK--RRMLSLDNAFNLEDLMAFDERVRQSVKNPEYVVELKMDGLAISL 118 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL--------- 183 Y +G+ +A++RG+GL GED T V I+++P + + ++GE+ + Sbjct: 119 HYHNGRFVQAVTRGDGLVGEDVTNNVRTIASIPMHIDME-GDLEVRGEVIMPKKSFEALN 177 Query: 184 -QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNS--LGVFVWAWPDGPQLMSDRLKELA 240 QR +++ N R AG +RQ DS S L +++ + +G Q + E A Sbjct: 178 EQRRKQGEEEFA--NPRNAAAG-SIRQLDSRIAASRKLDAYLYYF-EGAQQHAMHTHEEA 233 Query: 241 TAGFTLTQTYT----RAVKNADEVARVRNEW--WKAELPFVTDGVVVR------------ 282 + + KN EV + E + +LP+ DG+V++ Sbjct: 234 LEALEAMRIKVNPLRKVCKNMQEVWQFIQEMSERRNDLPYEIDGMVLKVNDLHAWDLLGT 293 Query: 283 AAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 AK P + +A+K+ V ++ I +VG++G+I+ A L PV + Sbjct: 294 TAKAP----------RYAIAYKFPAEEVVTKLLDIVLSVGRTGRITPNAVLEPVRVAGTT 343 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC 402 V + + +E D+ D +++ AG IP +VV ER T +F + Sbjct: 344 VSAATLHNEDMIKEKDVRINDDVIIRKAGDIIP---EVVRSLPERRNGTQGIYKFPQICP 400 Query: 403 YFASDV---------------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ---THR 444 + S + C + + ++ ++ + +D +G+ H+ + Sbjct: 401 FCGSKLVRFADEAAHYCMNQDCPARIVRGMIHFASRDAMNIDTLGDKKIEFFHKQGFLNT 460 Query: 445 FEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 E I+ L L E++ G + ++ ++++P + +GI Sbjct: 461 IEDIYE-LSLHKEEILALEGFQEKSFQKMILAIEASKERPLEDLLFGLGI 509 >UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW Length = 698 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 125/534 (23%), Positives = 215/534 (40%), Gaps = 75/534 (14%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPR 80 P QE + L+Q + + Y+ ++ED VYD+L L + S + Sbjct: 4 PQGLQERAAELRQLLNRAAHAYYVLDAPDLEDSVYDRLYRELLDLEAAHPELVEADSPTQ 63 Query: 81 DVMMPPLNG--AVMHPVA----------------HTGVRKMVDKNALSLWMRERSDLWVQ 122 V P G +V H + +T + K++D+ S + + Sbjct: 64 RVGGSPAEGFRSVTHRIPLFSLDNAFSAEELRGWYTRLLKVLDREPPSGSPLPALAMVGE 123 Query: 123 PKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQ--TVSGPLANSTLQGE 180 K+DG A+ L Y +G L +A +RG+G +GED T V I+++P + P A ++GE Sbjct: 124 LKIDGNALALSYDNGVLVRAATRGDGDQGEDITANVRTIASIPLRLHLDPPPAWVEVRGE 183 Query: 181 IFL--------QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWP------ 226 + E + + N R AG +RQ D + + + +A+ Sbjct: 184 ALIPDNTFAAINSERAARDEPLFANPRNACAG-TLRQLDPKVVAARRLDFFAYTLHLPED 242 Query: 227 ---DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVV 281 + P + L+ L AGF + + + D V + +W + +L + TDGVVV Sbjct: 243 WSGERPTSQWESLRWLEDAGFRVNPNAA-LLPDVDSVEQFFGDWDSRRHDLNYATDGVVV 301 Query: 282 RAA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 + + ++ + W +A KY + + + VG++G ++ VA PV L Sbjct: 302 KLNDLRLQDAAGFTQKAPRWAIALKYPAEEAPSRLLKLTCQVGRTGVVTPVAEFEPVSLA 361 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPT---PPENR 396 V R + + R QE D+ GD I+V AG+ IP V R +P P E Sbjct: 362 GTSVSRATLHNADRLQELDLHSGDTIIVRKAGEIIPE----VLRVLPELRPEGALPLELP 417 Query: 397 FNSLTCYFASDVCQE--QFISRLV--------------WLGAKQVLGLDGIGEAGWRALH 440 +C SD+ +E + +R V W+ +K L +DG+G L Sbjct: 418 QQCPSC--GSDLVRESGEAATRCVNSSCPAILSGALRHWV-SKGALDVDGLGSKLIEQLV 474 Query: 441 QTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + I L L + + + + L +R QP++R + +GI Sbjct: 475 ERGLVRSIADLYRLDTALLTSLERMGEKSAGNLVAALAQSRTQPWSRQLYGLGI 528 >UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepID=C9LC53_RUMHA Length = 671 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 117/521 (22%), Positives = 206/521 (39%), Gaps = 69/521 (13%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMMPP 86 E+I +L + + Y+ E + D YD++ L + ++ G S + V P Sbjct: 11 EKIKQLVDYLNLQRNAYYNENSPNISDAEYDRIFDELVELEKQTGFILSNSPTQTVGYTP 70 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 ++ V HPV + K L + ++ L++ K+DG+ LVY +G L +A + Sbjct: 71 ISELPKVKHPVPLLSLDKTKQVQDLISFAGKQPVLFML-KLDGLTTKLVYENGTLVEAST 129 Query: 145 RGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFLQ-----------REGHIQQ 191 RG+G GE T + VP ++ G L + GE F+ R+G + Sbjct: 130 RGDGEIGELITHNIPAYVDVPLSIPYKGRLV---IVGESFIPTHDFERLKETLRDGKGEP 186 Query: 192 QMGGIN-ARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSD----RLKELATAGF-- 244 G N A V L L+ + V D P L D ++ L GF Sbjct: 187 YKNGRNLASGSVRSLDPANCAGRCLHFMPFNVLEGLDSPFLFPDSRAMKISSLFDYGFQP 246 Query: 245 ----TLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR-------HWL 293 T + N + R+ + K LP DG+V+ S+ H+ Sbjct: 247 CPYIAANHPLTSELVNQ-YIERLTDLAGKKHLPI--DGIVMIFDSLDYSKNCGRTGHHYK 303 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 G +A+K++ ++ I++ + G+I+ V PV +D V R + ++ Sbjct: 304 DG-----LAFKFEDETYETTLRNIEWTPTRFGEIAPVGVFDPVEIDGCSVSRATLHNLTF 358 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRG--AERTKPTPP---------ENRFNS--- 399 +E ++ PG +I VS IP I++ + RG + P P + + N Sbjct: 359 IKELELVPGCRISVSKRNMIIPHIEENLERGHYVDAVPPVCPCCGSQTRIYQRKGNDGRL 418 Query: 400 -LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG---WRALHQTHRFEHIFSWLLLT 455 T + + C Q R K+ + ++G+ E + L F I+ L Sbjct: 419 IETVHCDNPNCDSQIRKRFTHFVGKKAMNIEGLSETTLEKFLTLGYLQTFPDIY-HLNEH 477 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 E++ G K +LW+ +R F R++++M IP+ Sbjct: 478 QEEILQLEGFGKKSFERLWNSITSSRNTTFVRFLVSMDIPM 518 >UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=DNLJ_BUCAT Length = 676 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 90/422 (21%), Positives = 173/422 (40%), Gaps = 39/422 (9%) Query: 110 SLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS 169 S+ E + K+DGVA++++Y +G +A +RG+G +GE+ T +I ++P + Sbjct: 101 SIHNNEPLSFCCELKLDGVAISIIYEEGIFVRAATRGDGFEGENITSNARMIDSIPLKLK 160 Query: 170 GPLANSTLQ--GEIFLQREGHIQ--------QQMGGINARAKVAGLMMRQDDSDTLNSLG 219 G L+ GE+F+ + I+ Q N R AG + D + T Sbjct: 161 GIDIPKRLEIRGEVFMLKSNFIKLNKKYKLNQNKYFSNPRNAAAGSLRHIDPNITAERKL 220 Query: 220 VFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE-----WWKA---- 270 +F G KEL T L + + + E+ ++ ++K Sbjct: 221 IFSC---HGCDFFVKTNKELTTHYQRLMKCLSWGIPVNKEIVICSSDIEIIQFYKKIAQK 277 Query: 271 --ELPFVTDGVVVRA-AKEPESRHWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGK 326 L F DG+V++ + E + + ++ W +A+K+ P ++ + ++F VG++G Sbjct: 278 RNFLDFDIDGIVIKVNSLELQKKIGSTTKSPRWAIAFKFSPKERITTLNDVKFQVGRTGV 337 Query: 327 ISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV--VWRG 384 I+ VA PV + + + ++ + + ++ D I + +G IPR+ +V + R Sbjct: 338 ITPVAYFNPVYISGVMISKASLHNKNEIERLNLHFNDTITICRSGDVIPRLLNVIEIRRC 397 Query: 385 AERTKPTPP-----------ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGE 433 K P EN L + C Q L +K+ L + G+G Sbjct: 398 DNAKKIIFPSFCPVCNTELLENIEEKLIRCHSGLTCDAQKKQALYHFFSKKSLYVVGLGP 457 Query: 434 AGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMG 493 L + ++ + L L + K KS ++ + +K ++ A+G Sbjct: 458 KIINELVEKGLVKNPIDFFYLKDIDLIQLKNVGKRKSIKIINSIKKCKKTTLKCFIYALG 517 Query: 494 IP 495 IP Sbjct: 518 IP 519 >UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 Length = 692 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 121/567 (21%), Positives = 235/567 (41%), Gaps = 102/567 (17%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR--CFGSEPRDVMMPPLNG- 89 +I L+++I++W+ Y++ V+D VYD+ L + +R F ++ P Sbjct: 10 KIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQSPSQKV 69 Query: 90 -----AVMHPVAHTG----VRKMVDKNALSLWMRERSDL------WVQPKVDGVAVTLVY 134 + VAH+ + K L W ++ ++ +V+PK+DG+A++L Y Sbjct: 70 GSKITSKFEKVAHSSPMLSLNKAYSNEELEKWAKKAREILKTVTFFVEPKIDGIALSLFY 129 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLIS--AVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 ++G L KA++RG+G+ GE+ I+ +P+ ++ L + ++GEI++ Q Sbjct: 130 QNGNLIKALTRGDGVFGENVLVNALKINDEFIPKKIN-YLEDLEVRGEIYIDNSTFASLQ 188 Query: 193 MGG---INARAKVAGLMMR----------------QDDSDTLNSLGVFVWAW--PDGPQL 231 + N R +G++ R +++SD L F + P+ ++ Sbjct: 189 LETKKFKNPRNAASGILRRYKNHKPKIDAKSIKFLEEESD-FRYLKSFFYTLVNPEKHKI 247 Query: 232 MS--DRLKELATAGFTLTQTYTRA-----VKNADEVARVRNEWWKAELPFVTDGVVVRAA 284 S D + L GF + + V N + + + ++ L + DGVVV+ Sbjct: 248 NSQFDSINFLRNLGFQVNPFQKKCSDLKDVFNFISIIKQKRDF----LNYNIDGVVVKVN 303 Query: 285 -----KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 ++ S P A +A+K++ ++ AI +G++GK++ A + PV L Sbjct: 304 EFSIYEKLGSTSKFPHSA---IAFKFEDDIAKTKLLAIFATIGRTGKVTYNAKIEPVTLA 360 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT----KPTPPEN 395 K+ + + + + ++ + AG+ IP+I V + K P N Sbjct: 361 GSKISSAILPNYSYIENLKLNLNTEVYIKKAGEIIPQIIGSVHNYPKTNFSIVKNCPKCN 420 Query: 396 R--FNS---LTCYFASDVCQEQFISRLVWLGAKQVLGLD-------------GIGEAGWR 437 NS L + + C E + ++V +K L ++ G+ + Sbjct: 421 SELVNSESGLDQFCQNQFCPEIILQKIVHFCSKNALNIESLAQKRIEKFLEKGLISSACD 480 Query: 438 ALHQTHRFEHIFSWL-----LLTPEQLQNTPGIAKSKS-AQLWHQFNLARKQPFTRWVMA 491 + + E I+ L LLT QN + KS +L ++ A+ F R + Sbjct: 481 IFYLKDKLELIYERLSNKNQLLTK---QNASQSMQIKSIMKLLNEVERAKNIDFYRLIFG 537 Query: 492 MGIP---------LTRAALNASDERSW 509 +GI L+R A N S+ R+ Sbjct: 538 LGIRNVGLKAAKILSRYASNLSELRNL 564 >UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AEV0_BURGB Length = 747 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 102/404 (25%), Positives = 168/404 (41%), Gaps = 50/404 (12%) Query: 21 VCPAWSPARAQEEISR-LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQ------- 72 PA PA E + L+Q++++ + Y+ + E+ D YD+L L Q + Sbjct: 4 TTPADPPASQPSERAAWLRQELERANHAYYVLDQPELLDAEYDRLFRELQQIEAEHPDFI 63 Query: 73 ------RCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMV---DKNALSLWMR--------E 115 + G E D P L+ A M + + + + DK + E Sbjct: 64 TPDSPTQRVGGEAADGFTPVLHDAPMLSLNNGFTDEDIAAFDKRVADALGKAVDLAGTAE 123 Query: 116 RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLA 173 + + K DG+A++L Y GK +A +RG+G GED T+ V I ++P T+ G P A Sbjct: 124 PVEYACELKFDGLAISLRYVHGKFTQAATRGDGTTGEDVTENVRTIKSIPLTLKGKHPPA 183 Query: 174 NSTLQGEIFLQREGHIQ--------QQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAW 225 ++GE+ + + + +Q N R AG +RQ DS + +A+ Sbjct: 184 LLDVRGEVLMYKRDFARLNERQRAAEQREFANPRNAAAG-SLRQLDSKVTAQRPLSFFAY 242 Query: 226 PDG-------PQLMSDRLKELATAGFTLTQTYTRAVKNADE--VARVRNEWWKAE-LPFV 275 G P S L + G + + RAV E + R K E LP+ Sbjct: 243 GIGVLDGAPMPDTHSGLLDWYESLGLPVNR--ERAVVQGAEGLLDFFRKVGEKREALPYD 300 Query: 276 TDGVVVRAAKEPESRH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DGVV + + E ++ + +A K+ + AI+ VG++G I+ VA L Sbjct: 301 IDGVVYKVNRRDEQDRLGFVSRAPRFALAHKFPAQEARTRLVAIEVQVGRTGAITPVARL 360 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 PV + V + + + DI GD ++V AG IP + Sbjct: 361 EPVFVGGATVTNATLHNEDEVRRKDIRVGDTVIVRRAGDVIPEV 404 >UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DNLJ_METNO Length = 829 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 133/590 (22%), Positives = 213/590 (36%), Gaps = 127/590 (21%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF--------- 75 + A+A+E L +I + D Y E + D YD L RL + F Sbjct: 14 MTAAQAREAHESLSAEIAEHDRRYHGEDAPIISDAEYDALRRRLEAIEERFPELAGTGAA 73 Query: 76 ----GSEPRDVMMPPLNGAVM----HPVAHTGVRKMVDK--NALSLWMRERSDLWVQPKV 125 G++ D + M + A + + V++ L L E +PK+ Sbjct: 74 SVSVGAKASDKFAKVRHAVPMLSLGNAFAEEEITEFVERVRRFLGLPASEPLAFTAEPKI 133 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST--LQGEIFL 183 DG++++L Y G+L A +RG+G GED T V I +P ++G ++GE++L Sbjct: 134 DGLSLSLRYEGGRLVTAATRGDGEVGEDVTANVRTIREIPHELAGDDVPEICEVRGEVYL 193 Query: 184 QREGHIQQQMGGINARAKVAGL------------MMRQDDSDTLNS--LGVFVWA----- 224 INAR + AG +RQ D S L F +A Sbjct: 194 S-----HADFAAINARQEEAGRPLFANPRNAAAGSLRQLDPGITASRPLRFFAYAAGEMS 248 Query: 225 -WPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVR 282 WP + S + G + R A+ +A R E +AEL + DGVV + Sbjct: 249 SWP--AETQSGLIGAFRRFGLPVNPRTKRCTSVAEMLAHYRAIETERAELGYDIDGVVYK 306 Query: 283 AAKEPESRH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD- 339 + R ++ W +A K+ V ++AI+ VG++G ++ +A L PV + Sbjct: 307 VDEFALQRRLGFVARAPRWALAHKFPAQRAVTVIEAIEINVGRTGSLNPLARLKPVTVGG 366 Query: 340 -------------------DKKVQRVNIG---------SVRRWQEWDIAPGDQILVSLAG 371 D R I V Q D+ GD ++V AG Sbjct: 367 VVVSNATLHNEDYIRGIDADGNTIRSGINIWDGFRLREDVDLRQGSDVRVGDTVVVLRAG 426 Query: 372 QGIPRIDDVVW--RGAE-------RTKP----------TPPENRFNSLTCYFASDVCQEQ 412 IP++ DVV R A+ T P P + +S+ +C Q Sbjct: 427 DVIPKVADVVLERRPADAVPYAFPETCPACGSHAVRAYNPRTGKLDSVRRCTGGLICPAQ 486 Query: 413 FISRLVWLGAKQVLGLDGIGEAGWRALHQTH-----------RFEHIFSWLLL------- 454 RL ++ ++G GE L + FE + + ++ Sbjct: 487 GQERLRHFVSRNAFDIEGFGETYIATLFEAGLVRQPADLFRLDFEPLKAAIVARRQALSA 546 Query: 455 --------TPEQLQNTPGIAKSKSA--QLWHQFNLARKQPFTRWVMAMGI 494 TPE + P + A L R P R++ A+GI Sbjct: 547 ERALAAGKTPEAKKAKPKANEEDKAIHNLLAAVEARRTIPLNRFIFALGI 596 >UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4SB11_OSTLU Length = 755 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 108/460 (23%), Positives = 182/460 (39%), Gaps = 88/460 (19%) Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL-ANST 176 + +PKVDG + +L Y +G+L A+SRG+G GED T+ + VP ++ P A Sbjct: 102 EYCAEPKVDGASASLRYENGELVYAVSRGDGEMGEDVTRHLIGARGVPMKLAEPYPAVLE 161 Query: 177 LQGEIFLQREG----HIQQQMGGI----NARAKVAGLMMRQDDSDTLNSLGVFVWAW--- 225 ++GE+ + E + ++ G+ NAR AG M D L + W Sbjct: 162 IRGEVHVADEDFQRVNAERAATGLRVFKNARNAAAGAMRTLVVDDNQMPLRFLAYGWGAV 221 Query: 226 ------PDGP-QLMSDRLKELATA-GFTLTQTYTRAVKNADEVARVRN--EWWKAELPFV 275 + P + S+ L A GF + K E+ + E + +P+ Sbjct: 222 GASNEETNAPWRTQSEFLSAFLPAQGFDAVP-FLGVAKTIGELIEAYDALEIARPTMPYE 280 Query: 276 TDGVV-------VRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKIS 328 DGVV ++ A ++R Q W +A K+ ++ V ++AI+ VG++G ++ Sbjct: 281 IDGVVYKVNSVELQTALGADAR-----QPRWAIAHKFTAMSAVTTLRAIEIQVGRTGALT 335 Query: 329 VVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI-----DDVVWR 383 VA L PV + + R + + + G Q+ V AG IPR+ DD+ Sbjct: 336 PVALLDPVDIGGASISRATLHNFDEIARKHLKVGAQVTVERAGDVIPRVVSLAGDDLAEA 395 Query: 384 G--AERTKPTP---PENR-------------------FNSLTCYFASDVCQEQFISRLVW 419 AE KP P P ++ S+ C Q + RL+ Sbjct: 396 SAYAEDIKPLPEWLPPSKCPDCGSSVVRAPLSASKTAMGSIVRCTGGLKCPSQSMERLLH 455 Query: 420 LGAKQVLGLDGIGEAGWRALHQTHRFE---HIFSW-LLLTPEQLQNTP------GIAKSK 469 A+ L + G+ LH+ + IF+ P+ P G+ SK Sbjct: 456 FCARDALDIRGLARGTLETLHREGVVKTPADIFTLERRFGPDSGDAVPTWWRYAGVKNSK 515 Query: 470 -------------SAQLWHQFNLARKQ-PFTRWVMAMGIP 495 + +L+ + R+ P R++ A+GIP Sbjct: 516 GEIKHGSDGLKQSAVKLFQAIEVRRQGVPLHRFIYALGIP 555 >UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=DNLJ_NOCSJ Length = 752 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 137/585 (23%), Positives = 247/585 (42%), Gaps = 84/585 (14%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP--LN 88 +EE + ++I++ Y+ ++D +D+ RL + F E R P + Sbjct: 64 REEHRLIAEEIEEARWRYYVLDSPTIDDADFDRRMRRLEALEEEF-PELRTPDSPTQTVG 122 Query: 89 GAVMHP-VAHTGVRKMVD-KNALSL------WMRERSD------LWVQPKVDGVAVTLVY 134 GAV +H +R+M NA S+ + R R D L + KVDG+A+ L+Y Sbjct: 123 GAVSTDFTSHPHLRRMESLDNAFSVEEVEAWYARLRRDGVEDPALLCELKVDGLAINLLY 182 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----PL-ANSTLQGEIFLQREGHI 189 +G+L +A++RG+G GED T V I++VP ++G P+ A ++GE+FL E Sbjct: 183 EEGRLVRALTRGDGTTGEDVTSNVKTITSVPHRLTGTDEFPVPALVEVRGEVFLPVEAFE 242 Query: 190 QQQMGGI--------NARAKVAGLMMRQDDSDTLN-SLGVFVWAWPD----GPQLMSDRL 236 + + N R AG + ++D T + +LG+ + PQ S Sbjct: 243 RLNESLLEAGKAPFANPRNSAAGSLRQKDPRITASRALGMVCHGIGERRGFEPQAQSHAY 302 Query: 237 KELATAGFTLTQ-----TYTRAVKNADEVARVRNEWWKAELPF-VTDGVVVRAAKEPESR 290 LA G + + + V+ E A R +P+ + VV + R Sbjct: 303 DALAAWGLPTSDQVRVVSTLKGVEGYIENAGARRHTI---VPYEIDGVVVKVDDVALQRR 359 Query: 291 HWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 +A W +A+KY P A++ I+ VG++G+++ A + P + V+ + Sbjct: 360 LGSTSRAPRWAIAFKYPPEEVNAKLLEIRVNVGRTGRVTPYAVMEPTKVAGSTVENATLH 419 Query: 350 SVRRWQEWDI------APGDQILVSLAGQGIPRI-DDVVWRGAERTKP-TPPENRFNSLT 401 + + D+ PGD +++ AG IP I V+ E +P PP + T Sbjct: 420 NFYEVERKDVRPGGPGDPGDTVILRKAGDVIPEILGPVLALRPEGLQPWVPPTTCPSCGT 479 Query: 402 CYFA------------SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRAL-------HQT 442 + C Q R+ ++ ++ ++G+G AL ++ Sbjct: 480 PLVEQKEGDKDRRCPNHEKCPGQLRERVFFVASRNAFDIEGLGYEAAVALLDAEVIANEG 539 Query: 443 HRFEHIFSWLL------LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI-- 494 F+ + LL P++ ++ P ++ + +L + A++ P R ++A+ I Sbjct: 540 DVFDLDAAALLRAPLFTRAPKKDEDGPQLS-ANGQRLLDNLDKAKQVPLWRVLVALSIRH 598 Query: 495 --PLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 P AL A++ S + + +TE+ G G A VIEW Sbjct: 599 VGPKAGRAL-ATEFGSMAAIRAATEEQLAAAEGVGPTIAEAVIEW 642 >UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_HERAR Length = 696 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 114/528 (21%), Positives = 205/528 (38%), Gaps = 90/528 (17%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR------CFGSEPRDV------MM 84 L+ ++ + + Y+ V D YDQL L + F S + V Sbjct: 34 LRSELNRHNYAYYVLDNPIVPDAEYDQLFRELQALEASHPELLVFDSPTQRVGALALTAF 93 Query: 85 PPLNGAVMHPVAHTGVRKMVDKNALS--------LWMRERSDLWVQPKVDGVAVTLVYRD 136 PP+ +V P+ G D++ L+ L RE + + K DG+A+ L Y D Sbjct: 94 PPVTHSV--PMLSLG-NGFEDEDVLAFDKRVSEGLNSREEVEYATELKFDGLAINLRYED 150 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFLQREGHIQQQMG 194 G L +A +RG+G GE+ T + + A+P + + P ++GE+ + + + Sbjct: 151 GVLVQAATRGDGATGENVTANIRTVRAIPLRLHTNNPPKVLDVRGEVMMYK-----ADLA 205 Query: 195 GINARAKVAGLM------------MRQDDSDT-------LNSLGVFVWAWPDGPQLMSDR 235 +NAR + AG +RQ DS S G+ + D P S Sbjct: 206 KLNARQRDAGAKEFANPRNAAAGSLRQLDSRITAQRSLRFFSYGIGLLEGADMPASHSAL 265 Query: 236 LKELATAGFTLT--QTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRH-- 291 L A G + + R V+ E + +E + +LP+ DGVV + + + Sbjct: 266 LDWYAELGIPVCSERAVVRGVQGLLEFYKATSE-KRPQLPYEIDGVVYKVNRVDQQLQLG 324 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 ++ + +A K+ + V+ I+ VG++G I+ VA LAPV++ V + + Sbjct: 325 FVSRAPRFAIAHKFPAEEALTTVQDIEVQVGRTGAITPVARLAPVLVGGVTVTNATLHNE 384 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVC-- 409 + DI GD ++V AG IP + V PE R S + C Sbjct: 385 DEVRRKDIQIGDTVIVRRAGDVIPEVVAFV-----------PERRPASARPFIMPSSCPV 433 Query: 410 --------QEQFISR---------------LVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 +++ I+R L+ +++ + ++G+G+ L H Sbjct: 434 CGSPIVRLEDEAIARCSGGWVKCAAQRKGGLLHFVSRRAMDVEGLGDQLVEQLVDKHIIT 493 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 L L +A + + +++ R++ A+GI Sbjct: 494 TAADLYKLGFRALAELDRMADKSAQNVLDALEKSKRTTLARFIYALGI 541 >UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudomonas phage EL RepID=Q2Z0V9_9CAUD Length = 656 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 123/565 (21%), Positives = 230/565 (40%), Gaps = 87/565 (15%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQ-WQRC--------FGSEPRDV 82 E I L +Q+ Y+ E ++E+ D YD L L + + R F + P + Sbjct: 8 ERIKYLHEQLTYHAHLYFVENRNEISDEAYDVLEQELNELYDRYPEIAAKFDFYNRPVPI 67 Query: 83 MMPPLNGAVMHPVAHT----GVRKMV---DKNALSLWMRERSDLWVQPKVDGVAVTLVYR 135 P +G + PV ++K + + + L + ++ + + K+DG+A+ LVY Sbjct: 68 HEP--SGETIQPVRFEEPMLSLKKALSVEEADTFLLKFPDGTNFFYEEKLDGLALELVYE 125 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLI--SAVPQTVSGPLANSTLQGE-IFLQREGHIQ-- 190 G+L +RG+GL GED T + L + +P+T+ QG+ + ++ EG+I Sbjct: 126 QGQLVSMSTRGSGLVGEDVTHSIVLFDEATLPRTLRTLPDRHKPQGDRLVIRGEGYISLE 185 Query: 191 -----QQMGG--INARAKVAG---LMMRQDDSDTLNSLGVFVWAWPD--GPQLMSDRLKE 238 + GG N R V+G + + D +L + D G + S+ + Sbjct: 186 RFDSLNETGGKRSNPRNAVSGWVRSLPQNQREDIRGTLYFAAYYASDRLGTKAYSELRQV 245 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQA- 297 L GF + ++ + + +R DG+V++ K E G Sbjct: 246 LLGLGFGVPESRDWIAVSENRRGNIRP----------VDGIVIKVDKFKEQDASGNGSKF 295 Query: 298 -EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K+ +A+V+ + + G++ V PV + Q ++ + + + Sbjct: 296 PHWAIAYKFPAEEALAQVEGCIWNTSRFGRVVPVVQYTPVTIQGVICQSASLDNYGSFMD 355 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGA----ERTKPTPPENRF---------NSLTCY 403 ++ GD+I+++ IPR++ V G E P + + L C Sbjct: 356 LGLSIGDRIVITRNNDVIPRLNRVEECGEGDLLEAPTSCPSCDSLLEVVVGRDSSELVCN 415 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIG--------EAGWRALHQTHRFEHIFSWLLLT 455 ++ C Q + R V K L +DG+G E GW + Q + +L Sbjct: 416 NVAE-CPAQIVMRCVTTFDKFGLDVDGLGPVKVSELVEKGW--VKQP-------ADILTL 465 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP-----LTRAALNASDERSWS 510 PE +++ + + + + L P R++ A+GIP L + NA E Sbjct: 466 PEGIKDQ---CLTPTTRRGLERVLQEPVPLHRFLKALGIPDIGITLAKRLANAIPEGKIE 522 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVI 535 + L + +F Q + G G A +V+ Sbjct: 523 ESL-TNPKFLQSVRGVSVGIAYRVV 546 >UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WS37_9ACTO Length = 799 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 89/353 (25%), Positives = 148/353 (41%), Gaps = 49/353 (13%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST-LQGEIF 182 K+DG+AV L Y G+L +RG+G+ GED T V IS+VPQ++ G + ++GE+F Sbjct: 119 KIDGLAVNLRYVGGELVVGATRGDGVTGEDVTANVRTISSVPQSLRGDFPDVVEIRGEVF 178 Query: 183 LQREGHIQQQMGGINARAKVAGLM------------MRQDDSDTLNSLGVFVWAWPDG-- 228 + + NAR + AGL +RQ D + A G Sbjct: 179 IP-----LAKFDSFNARQRAAGLKEFANPRNAAAGSLRQKDPKVAAERPLDFIAHGAGRI 233 Query: 229 --------PQLMSDR-LKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTD 277 +L S + L EL Y R V + D+V E+ +++L D Sbjct: 234 DGTSSAVDEKLASQKGLYELFQEWGVPVSPYVRLVSSWDDVEGFVREYADLRSDLIHGID 293 Query: 278 GVVVR--AAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 G V + + E E W VA+KY P + I+ VG++G+++ A + P Sbjct: 294 GAVFKIDSRAEQEDLGATSRVPRWAVAYKYPPEEVETRLLDIKVQVGRTGRVTPFAVMKP 353 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI---DDVVWRGAER----- 387 V + V + + + + GD ++V AG IP + + G+ER Sbjct: 354 VTVAGSTVAQATLHNPSEVARKGVLIGDVVVVRKAGDVIPEVLGPVSALRDGSEREWTMP 413 Query: 388 -------TKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGE 433 T+ P ++ + C A C Q R+ ++G++ L ++ +GE Sbjct: 414 SACPSCGTELAPAKDGDVDIRCPNARS-CPAQLAERVAYIGSRAALDVEALGE 465 >UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris RepID=C2KQS7_9ACTO Length = 917 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 101/395 (25%), Positives = 159/395 (40%), Gaps = 89/395 (22%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS--TLQGEI 181 KVDG+A++L Y DG+L +RG+G GED T V I VPQT+ G + ++GE+ Sbjct: 156 KVDGLAMSLTYVDGQLMTGATRGDGRVGEDVTANVRTIKTVPQTLGGTVIPHLVEIRGEV 215 Query: 182 FLQREGHIQ---------------------QQMGGI-------NARAKVAGLMMRQDDSD 213 +L E Q +++ + N R G + ++D + Sbjct: 216 YLPLEDFAQMNAEREANNAAWEAARAAGDKEKLKTLKKMPLFANPRNAATGSLKQKDSIE 275 Query: 214 TLNSLGVF-------VWAWPDGPQLMS---DRLKELAT-----------------AGFTL 246 F V WPDG M+ D ++L AG T Sbjct: 276 AAKRPLAFLAHGLGAVQGWPDGVSPMATQEDFYRQLEVWGIPSVRRTPQSLGLRMAGLT- 334 Query: 247 TQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQA---EWLVAW 303 T T AV A + R+++ DGVV++ +R L A W A+ Sbjct: 335 TLTQVHAVLAA--MTEHRHDFSHQ-----IDGVVLK-VDNLAARVLLGSTARAPRWACAY 386 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 K+ P + I+ VG++G+++ A + V++D V R + + + D+ PGD Sbjct: 387 KFPPEEVHTRLLGIEVQVGRTGRVTPFAVMERVLVDGSYVSRATLHNAKEVARKDVRPGD 446 Query: 364 QILVSLAGQGIPRIDDVVWRGAERTKPTP----PE------NRFN-------SLTCYFAS 406 +++ AG IP + V + R P PE R L C + Sbjct: 447 TVVLRKAGDIIPEVLGPVL--SLRPGGLPEWVMPEMCPSCGTRLGQEKEGDIDLRCPNQA 504 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 C Q RL+ +GA+ L ++G+GE G AL Q Sbjct: 505 G-CPAQITERLIHVGARGALDIEGLGEEGALALTQ 538 >UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNLJ_CAUSK Length = 792 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 107/429 (24%), Positives = 173/429 (40%), Gaps = 50/429 (11%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPL 87 A+A EE+ RL + D Y ++ + D YD L R + F RD Sbjct: 12 AQAAEELERLADDLAAHDLRYHQQDAPTISDAEYDALKRRNLDIEDRFPHLVRDNSPSMR 71 Query: 88 NGAV----MHPVAHTGVRKMVDKNALS------------LWMRERSD---LWVQPKVDGV 128 GA PV H GV + NA S ++R ++ +PK+DG+ Sbjct: 72 VGAARAEQFSPVEH-GVPMLSLDNAFSNDEATEFDARIRRFLRLTNEPVFYTAEPKIDGL 130 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANS-----TLQGEI 181 + +L Y G L + +RG+G GED T + I+ +P + G P ++GE+ Sbjct: 131 SASLRYEKGVLVQGATRGDGRMGEDVTANLRTIADIPHRLRGGDPQGGGWPDVIEIRGEV 190 Query: 182 FLQREGHIQQ--------QMGGINARAKVAGLMMRQDDS--DTLNSLGVFVWAWPDGPQL 231 +++ E Q N R AG +RQ D L F +AW + Sbjct: 191 YVELEAFAAFNAAALEAGQRTYANPRNFAAG-SLRQIDPKISAQRPLRFFAYAWGLTSEG 249 Query: 232 MS----DRLKELATAGFTLTQTYTRAVKNADEVARV--RNEWWKAELPFVTDGVVVRAAK 285 + + L +L GF T V++A + + + E + +L F DGVV + Sbjct: 250 FAATQWEALGKLRDWGFVTTAPPAERVQDAQGLLDIYAKFEVERPKLAFDIDGVVYKVDD 309 Query: 286 EPESRH--WLPGQAEWLVAWKYQPVAQVAEV-KAIQFAVGKSGKISVVASLAPVMLDDKK 342 + R ++ W +A K+ P Q + +AI VG++G I+ VA L PV + Sbjct: 310 LEQQRRLGFVSRSPRWAIARKF-PAQQARTILEAIDLQVGRTGAITPVARLKPVTVGGVS 368 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC 402 V + + D+ GD +++ AG IP+I V ER P C Sbjct: 369 VTNATLHNADEIARKDVRIGDTVILQRAGDVIPQIVGPVLE--ERPAGAVPFEFPTHCPC 426 Query: 403 YFASDVCQE 411 + + + +E Sbjct: 427 HLETPLVRE 435 >UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CUT6_BACTU Length = 669 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 109/517 (21%), Positives = 203/517 (39%), Gaps = 74/517 (14%) Query: 37 LQQQIKQWDDDYWK------EGKSEVEDGVYDQLSARLTQWQRC---FGSEPR------D 81 ++Q+IKQ ++ K EG + D YDQ+ L + F E Sbjct: 2 IEQKIKQLREEVMKHDLLYDEGTPIITDSEYDQMYYELVSLEEKHPEFADENSPTKRIYS 61 Query: 82 VMMPPLNGAVMHPVAHTGVRK-MVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLN 140 V++ L + H K +++ + + ++ K DG+ + L Y +G Sbjct: 62 VVVDSLK-KIKHSTPMLSQDKGHTEEDIVKFANKSDDEIIAGDKEDGLTIVLKYNNGIYY 120 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ-QQMGGINAR 199 +A +RG+G GED T V I+ +P+ +S +G + ++ E I + IN Sbjct: 121 EASTRGDGYIGEDVTHTVRTITNLPKKIS-------FKGYLEVRAESVIPFSEFERINVD 173 Query: 200 AK-------VAGLMMRQDDSDTLNSLGVFVWAW----PDGPQLMSD--RLKELATAGFTL 246 K V+G +R +++ G+ + A+ +G D +L+ L GF + Sbjct: 174 GKYKSPRNLVSG-SVRTLNANIAKERGLSIIAFDLVKAEGITFEKDTEQLEFLKEQGFNV 232 Query: 247 T-----QTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEW 299 + +K + N+ + +P + DG+V++ ES + W Sbjct: 233 VPYKVFKNTPEGIKELIQYCLTYNKEVRPTIPHMIDGLVLKFNNLAVRESLGYTSKFPRW 292 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 A+K+ + ++ I VGKSG+I+ PV +D +Q+ ++ + +E DI Sbjct: 293 GFAFKFDSLDATTKLLNIVETVGKSGQITPNGIFEPVEIDGVTIQKASLANYDNIKERDI 352 Query: 360 APGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNSLTC--------------- 402 GD I+V+ A IP+I V R + PP TC Sbjct: 353 RIGDTIVVARANDVIPQIVSAVTELRDGTEKEILPP-------TCCPVCKGEVVKEEDNV 405 Query: 403 -YFA-SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQ 458 YF + C Q L ++ + +DG+G ++ I L ++ Sbjct: 406 HYFCINSTCSAQQERILKHFVSRNAMNIDGLGAKTVETFYEKGILSSISDIYTLKDNLDK 465 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L G + K ++ ++ P ++++ A+ IP Sbjct: 466 LSVLRGFGEKKIQKMLSGIEESKHVPLSKFLYALAIP 502 >UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MVF8_9CHLO Length = 887 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 110/428 (25%), Positives = 175/428 (40%), Gaps = 68/428 (15%) Query: 24 AWSPARAQEEI----SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR------ 73 AW+ A E+ + L + I + D+ Y + D YD RL + Sbjct: 72 AWASALPASEVPAAMASLAEFISRADEAYHNDADPVASDAAYDATRLRLEALEALHPAMI 131 Query: 74 -------CFGSEPRD-VMMPPLNGAVMHPVAHTG-------VRKMVDKNALSLWMRERSD 118 G++P +P + AV P+ G VR V + +L ER D Sbjct: 132 REDSPIGAVGAKPAAWSALPQVEHAV--PMRSLGNCFDDDDVRAFVARVTRALGPPERFD 189 Query: 119 --------LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG 170 +PK+DG + +L Y DG L A SRG+G GED T+++ I P T++G Sbjct: 190 DDARAPLRFCAEPKIDGASASLRYVDGVLVVAASRGDGEVGEDVTRQIGGIPGAPTTLTG 249 Query: 171 PLAN--STLQ--GEIFLQREG----HIQQQMGGI----NARAKVAGLMMR-----QDDSD 213 + +TL+ GE+F+ + + +++ G+ +AR AG M R +D +D Sbjct: 250 RAGDWPATLEIRGEVFIADDDFAALNARREARGMPTFKSARNAAAGAMRRLEPPSRDGAD 309 Query: 214 TLNSLGVFVWAWPD-GPQL-----MSDRLKELATAGFTLTQTYTRAVKNADEVARVRN-- 265 L + W + PQ S R + L+ T D A V Sbjct: 310 AGRYLRFLAYGWGEVKPQTELLPWSSQRAFLASLPALGLSPVPTLGPITDDVAALVAGSH 369 Query: 266 ---EWWKAELPFVTDGVVVRAAKEPESRHWLPGQA---EWLVAWKYQPVAQVAEVKAIQF 319 E +A L + DGVV + + S+ L + W A K+ V ++A+ Sbjct: 370 AALERDRASLGYRVDGVVYK-VDDVASQRILGADSRAPRWATAHKFAAETAVTTLRAVDV 428 Query: 320 AVGKSGKISVVASL-APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRID 378 VG++G ++ VA+L PV L V R + + + G +++V AG IPR+ Sbjct: 429 QVGRTGALTPVATLDPPVALGGATVTRATLHNFEDVARKGLRLGARVVVERAGDVIPRVV 488 Query: 379 DVVWRGAE 386 VV G E Sbjct: 489 RVVAEGEE 496 >UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Siphoviridae RepID=B2I4G8_9CAUD Length = 323 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 86/361 (23%), Positives = 163/361 (45%), Gaps = 51/361 (14%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMH 93 ++ +++ IK+ + Y+ +G S + D YD+L R P + + P G + H Sbjct: 1 MTNVKEFIKRCQEAYY-QGMSLISDEEYDRLIKRF----------PLEEEIGP-KGDIPH 48 Query: 94 PVAHTGVRKMV----DKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGL 149 ++K+ DK + + +D K+DG A++L+Y +G+ +A++RGNG+ Sbjct: 49 LYRMYSLQKVYYGRGDKAPFNPLGQVETD-----KLDGCAISLLYINGEFVQALTRGNGI 103 Query: 150 KGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQ 209 G D T V +++ +P+T+S + + + GE+ + +E N R +G + + Sbjct: 104 LGNDVTHNVKMLN-IPKTISQKVP-TQITGEVLITKEVE--------NKRNYASGAINLK 153 Query: 210 DDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAV-----KNADEVARVR 264 D D + +G +G + + + +T+ Y + + +N V VR Sbjct: 154 DSDDFIQRIG-------EGGLIFVAYGIQCSAETVGITEAYLKDMLWLENENFLTVVNVR 206 Query: 265 NEW-WKAELPFVTDGVVVRAAKEPE--SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAV 321 + + W +P TDG VVR + W A K ++ + +++ V Sbjct: 207 SFFKW---IP--TDGKVVRINDNNKFFREGWTNKFPRGAFAIKEDEEGEITTLVKVEWQV 261 Query: 322 GKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV 381 G SGK++ V PV++DD + + + +V D+ G QI V AG IP I + V Sbjct: 262 GASGKVTPVGYFEPVIIDDATIVKATLNNVDYINALDLEIGCQIRVIRAGGVIPCIVERV 321 Query: 382 W 382 + Sbjct: 322 Y 322 >UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRA8_9ACTO Length = 799 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 93/374 (24%), Positives = 154/374 (41%), Gaps = 66/374 (17%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEI 181 KVDG+A++L Y G L +RG+G GED T+ V I+ VP +SG ++ GE+ Sbjct: 130 KVDGLAMSLTYLHGTLAVGATRGDGFTGEDVTENVKTIATVPVRLSGENVPELVEIRGEV 189 Query: 182 FL----------QREGHIQQQMGGINARAKVAGLMMRQDDSDT--------LNSLGVFVW 223 +L RE ++ N R G + ++D + +G W Sbjct: 190 YLPLADFAAMNAARERDGEKLFA--NPRNAATGSLKQKDPVQAAKRPLAFLAHGVGKVRW 247 Query: 224 AWPDGPQLMS--DRLKEL-------------ATAGFTLTQTYTRAVKNADEVARVRNEWW 268 A P + + EL A+ G +L ++ A E+ V ++ Sbjct: 248 ADPGAAAHLETQEDFYELLESWGLHSVRETPASLGLSLAGIHSLA-----EIHTVLDQMT 302 Query: 269 KAELPFV--TDGVVVRAAKEPESRHWLPGQA---EWLVAWKYQPVAQVAEVKAIQFAVGK 323 F DGVV++ + R L A W A+K+ P + I+ VG+ Sbjct: 303 AHRHDFAHQIDGVVLKVDSFAQ-RDALGSTARAPRWACAYKFPPEEVHTRLLGIEVQVGR 361 Query: 324 SGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR 383 +G+++ + V++D V R + + + D+ PGD +++ AG IP I V Sbjct: 362 TGRVTPFGVMERVLVDGSYVSRATLHNAKEVARKDVRPGDTVVLRKAGDIIPEILGPVM- 420 Query: 384 GAERTKPTP----PENRFNSLTCYFA---SDV---------CQEQFISRLVWLGAKQVLG 427 + RT P P+ + T A D+ C Q RL+ +G++ L Sbjct: 421 -SLRTAGLPEWVMPDTCPSCGTELGAQKEGDIDLRCPNQSGCPAQITERLIHVGSRNALD 479 Query: 428 LDGIGEAGWRALHQ 441 ++G+GE G AL Q Sbjct: 480 IEGLGEEGALALTQ 493 >UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_ARTS2 Length = 790 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/321 (26%), Positives = 138/321 (42%), Gaps = 29/321 (9%) Query: 96 AHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWT 155 A V K+ + A W+ E K+DG+AV L+YRDGKL +A +RG+G GED T Sbjct: 145 AEASVAKLGNGTAGPAWLTEL-------KIDGLAVNLLYRDGKLVRAATRGDGYTGEDIT 197 Query: 156 QKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQMGGI--------NARAKVAGL 205 V I +PQ ++G A ++GE+F+ + + I N R AG Sbjct: 198 HNVLTIKEIPQQLTGGNYPAEMEVRGEVFIPSKAFAEYNEALIEAGKAPLANPRNAAAGS 257 Query: 206 MMRQDDSDTLN-SLGVFVWAWPDGPQL----MSDRLKELATAGFTLTQTYTRAVKNADEV 260 + ++D ++T L ++V L SD ++LA G T Y + + ++ Sbjct: 258 LRQKDPAETAKRPLRMYVHGIGAREGLRTVSQSDTYRQLAEWGLP-TSPYFEVLGSLKDI 316 Query: 261 ARVRNEWW--KAELPFVTDGVVVRAAKEPESRH--WLPGQAEWLVAWKYQPVAQVAEVKA 316 + + L DG+VV+ R + W VA+KY P ++ Sbjct: 317 LDFIKRYGDKRHSLTHEIDGIVVKVDDFATQRALGYTSRVPRWAVAYKYPPEEVHTKLLD 376 Query: 317 IQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPR 376 I VG++G+++ + PV + V + + + + GD +++ AG IP Sbjct: 377 IAVNVGRTGRVTPFGIMEPVKVAGSTVGMATLHNQDVVKAKGVKIGDIVVLRKAGDVIPE 436 Query: 377 IDDVVWRGAERTKPTPPENRF 397 I V A R + PP F Sbjct: 437 IVGPVL--ALRDQQDPPVRDF 455 >UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 RepID=DNLJ_ACICJ Length = 682 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 90/400 (22%), Positives = 167/400 (41%), Gaps = 27/400 (6%) Query: 122 QPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANST-LQGE 180 +PK+DG++++L Y + + + +RG+G +GED T+ + + +P T+ + ++GE Sbjct: 121 EPKIDGLSISLTYENRRFVRGATRGDGTEGEDVTENLRTLRELPATLPDDAPDFIEIRGE 180 Query: 181 IFLQREGHIQQQMGG----INARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQLMS-- 233 +++ + I G N R AG + + D + T + L +F +A Q + Sbjct: 181 VYMTKTDFITLNQGQARQFANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQAVGET 240 Query: 234 --DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEP-ESR 290 D L L GF + R + E + +A L + DGVV + + R Sbjct: 241 HWDYLAILRRWGFPVNPLAERVSEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQER 300 Query: 291 HWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 G+A W VAWK+ + + I VG++G ++ A L PV + V + Sbjct: 301 LGFAGRAPRWAVAWKFPAERALTTLLGIDIQVGRTGALTPRARLDPVNVGGVLVSHATLH 360 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPEN--RFNSLTCYFA 405 + D+ GD + + AG IP+I + R A+ P++ +L A Sbjct: 361 NEDEIARKDVRIGDTVELQRAGDVIPQILRALPERRPADSVPFVFPDHCPVCGALAIRPA 420 Query: 406 SDV---------CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP 456 +V C Q + RL+ ++ ++G+GE + H E L Sbjct: 421 GEVVRRCTGGLSCPAQVVERLIHFCSRLAFDIEGMGEKTVQEFHGLGWLESPADIFTLRD 480 Query: 457 EQ--LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 + + G + + +L + R+ R++ A+GI Sbjct: 481 REAAIAALEGWGEVSARKLIAAIDARRRISLARFIYALGI 520 >UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA Length = 667 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/401 (21%), Positives = 160/401 (39%), Gaps = 35/401 (8%) Query: 124 KVDGVAVTLVYRD-GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIF 182 K DG+ V L Y + G L + +RGNG GE+ T +V I ++P + + GE Sbjct: 121 KFDGLTVNLTYNEEGMLEVSATRGNGEIGENVTAQVKTIKSIPLKLQENHDLFEVHGEAI 180 Query: 183 LQREGHIQQQMGG----INARAKVAGLMMRQDDSDTLN-SLGVFVW--AWPDGPQL---- 231 + +E + N R AG + + +T L F + + +G Q Sbjct: 181 MTQEAFEKYNSSADSPLKNLRNGAAGALRNLNVKETARRDLSAFFYDVGYKEGYQFKTYL 240 Query: 232 -MSDRLKE--LATAGFTLTQTYTRAVKNA-DEVARVRNEWWKAELPFVTDGVVVRAAKEP 287 M D +KE L + +KN D + ++R +L + DG+V+ A + Sbjct: 241 EMMDFIKEKGLPVDDYLKVCVSIEDIKNEIDYIEKIR-----FDLNYDIDGLVI-AIDDI 294 Query: 288 ESRHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 +R L + W +A+K++ ++ +++ VG+SG+I A L PV L V+ Sbjct: 295 RTRELLGYTVKFPKWAIAYKFEAQEATTKLVDVEWNVGRSGRIGPTAILEPVELAGVTVK 354 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-- 402 R + ++ + + G + + + IP I + E ++ P + Sbjct: 355 RATLNNMDDIKRKGVRIGADVFIRRSNDVIPEIMGTLENTLENSEEIFPPTECPACGSHV 414 Query: 403 ------YFASDV--CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 YF + C+ Q + +V ++ + + G E L + + I L Sbjct: 415 VLNGAHYFCENTLSCKPQLVKTIVHYASRDAMNIAGFSEKTAEQLFEKLNIKSISDLYKL 474 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 E L N K+ L + +++ ++ A+GIP Sbjct: 475 KKEDLINLEKFGDKKAENLLNAVEGSKECKLYSFIYALGIP 515 >UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 Length = 853 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 117/509 (22%), Positives = 201/509 (39%), Gaps = 111/509 (21%) Query: 22 CPAWSPAR---AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS- 77 PA +PA A + L+ +I++ D+Y+ S + D YD L L + + Sbjct: 15 VPATTPADLEAASARVDALRTEIERHRDEYYGADASTLSDAEYDALVHELEALEEAHPTL 74 Query: 78 ----EPRDVMMPPLNGAVMHPVAHTGVRKM------------------VDKNALSLWMRE 115 P + + PV H +M V+++A S +R Sbjct: 75 RSQDSPTQTVGGRAETTLFAPVTHA--ERMLSLDNVFSEEELAEWAAKVERDAGSGRVRY 132 Query: 116 RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----P 171 S+L K+DG+A+ L Y G L A +RG+G+ GED TQ V + VP+ + G P Sbjct: 133 LSEL----KIDGLAINLRYEHGVLVTAATRGDGVVGEDVTQNVLTMGTVPERLMGSGHPP 188 Query: 172 LANSTLQGEIFL---------QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVF- 221 L ++GEIF R+ + +++ N R AG + ++++ + L + Sbjct: 189 LVE--VRGEIFFPVAEFDELNARQLEVGERVFA-NPRNAAAGSLRQKEEGKSPARLELMR 245 Query: 222 ------------VWAWPDGPQLMSDRLKELATAGFTLTQ---------------TYTRAV 254 + AWP ++ELA+ Q T+ R Sbjct: 246 ARIRRLRMLVHGIGAWP---------VRELASDAHVSAQSEVYGLLAGWGLPISTHFRVF 296 Query: 255 KNADEVARV--RNEWWKAELPFVTDGVVVRA-----AKEPESRHWLPGQAEWLVAWKYQP 307 + EV R+ +AE+ DG+VV+ +E + P W A+KY P Sbjct: 297 DDISEVTEFVRRHGAHRAEVEHQIDGIVVKVDDLGLHEELGATSRAP---RWATAYKYPP 353 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 + I +VG++G+ + A + V + +V++ + + + + + GD +++ Sbjct: 354 EEVNTTLLDIVVSVGRTGRATPFAVMEKVEVAGSEVRQATLHNQQVVKAKGVLIGDTVVL 413 Query: 368 SLAGQGIPRIDDVVWR---GAER--TKPT----------PPENRFNSLTCYFASDVCQEQ 412 AG IP + V G ER PT P + L C A C Q Sbjct: 414 RKAGDVIPEVLGPVVELRDGTEREFVMPTLCPECQTPLRPAKEGDIDLRCPNARS-CPAQ 472 Query: 413 FISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 R+ + ++ L ++G+GE AL Q Sbjct: 473 VRGRVEHVASRGALDIEGLGEVAAAALTQ 501 >UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1BD54_CLOBO Length = 649 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 98/456 (21%), Positives = 184/456 (40%), Gaps = 42/456 (9%) Query: 116 RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--GPL- 172 +++ + K DG+ L+Y +G+L + +RGNG GED T V +P + G L Sbjct: 96 NNEILIMDKGDGLTCELIYDNGQLLQGSTRGNGEIGEDITHNVKTFKNIPLQIDFKGYLK 155 Query: 173 --ANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWP---- 226 S + E F + ++ N+R VAG +RQ DS + V +A+ Sbjct: 156 LSGESVILDEDFELINAKLDEEDKYSNSRNLVAG-SVRQLDSKICDKRNVRFYAFSLLEC 214 Query: 227 --DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA--ELPFVTDGVVVR 282 + ++L+ L+ GF T Y + N++E+ +V ++ K+ E F DG+V Sbjct: 215 GEAEFKTKEEQLEFLSRLGFE-TIEYIK-YDNSEELEQVISKMQKSAYEKGFPIDGLVF- 271 Query: 283 AAKEPESRHWLPGQAEW---LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 A E + L +A+K+ + A ++ V ++G I+ VA PV ++ Sbjct: 272 AYNNIEYANSLGDTLHHPLHSIAYKFYDEEYETKYIATEWQVSRTGMINPVARFEPVEIE 331 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE----- 394 V+R + ++ +++ + GD I V A Q IP++ + T+ P E Sbjct: 332 GSVVERATLHNLDYFEDLKLGQGDTIKVIKANQVIPKV--MSNDTMSNTEIIPTECPVCG 389 Query: 395 --------NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 L C + C + ISR+V ++ + +DG+ E + Sbjct: 390 GKTEEKLLKTARVLIC--INPECSAKHISRIVHYCSRNAMNIDGLSEKTIEKFVNLGYLK 447 Query: 447 HIFSWLLLT--PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP---LTRAAL 501 I L E++ N G + ++ ++ A+G+P L A L Sbjct: 448 DIDDIYKLEQYKEEIINIDGFGTKSYNNMIEAIEKSKHCKLENFIFALGVPSVGLGTAKL 507 Query: 502 NASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 +S +++ + + G G ++ + Sbjct: 508 LVKKFKSIEKVMNCNLEEIYSIDGIGDVVGNEIYNY 543 >UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli RepID=DNLJ_LEIXX Length = 747 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 93/374 (24%), Positives = 158/374 (42%), Gaps = 54/374 (14%) Query: 116 RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----- 170 R D + K+DG+A+ L Y +G L A +RG+G+ GED T+ + I A+ Q +SG Sbjct: 107 RVDYLCELKIDGLAINLRYENGVLVTAATRGDGVVGEDVTENIRHIPAITQRLSGAGPFP 166 Query: 171 PLANSTLQGEIFLQ----REGHIQQQMGG----INARAKVAGLMMRQDDS---------- 212 P+ ++GE+F E + QQ G NAR +G + ++ + Sbjct: 167 PVVE--VRGEVFFPVAKFEELNANQQAAGERVFANARNAASGSLRQKAEGKNPAQRRLMR 224 Query: 213 DTLNSLGVFVW---AWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARV--RNEW 267 D L L + V AWP+ P + EL + T + R E A R+ Sbjct: 225 DRLGRLRMLVHGIGAWPNPPVATQSGVYELLRSWGLPTSAHGRVFGTVQEAADFIGRSAE 284 Query: 268 WKAELPFVTDGVVVRAAK-----EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVG 322 + + DGVV++ + E + P W +A+KY P ++ I +VG Sbjct: 285 RRDTVEHEIDGVVIKVDELVLHDELGATSRAP---RWAIAYKYPPEQVNTKLLDIVVSVG 341 Query: 323 KSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW 382 ++G+ + A + V + +V++ + + + + GD +++ AG IP + V Sbjct: 342 RTGRATPFAVMEKVKVAGSEVRQATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEVLGPVV 401 Query: 383 R---GAER------------TKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLG 427 G ER T P + L C A + C Q R+ +G++ L Sbjct: 402 ELRDGTEREFAMPTDCPECGTPLAPAKEGDIDLRCPNA-EFCPAQVRGRVEHIGSRGGLD 460 Query: 428 LDGIGEAGWRALHQ 441 ++ +GE AL Q Sbjct: 461 IEALGEVAAAALTQ 474 >UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE Length = 657 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 89/410 (21%), Positives = 173/410 (42%), Gaps = 52/410 (12%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--GPLANSTLQGEI 181 K+DG+ + L Y+DG L KA++RG G +GE T + +P T++ G L L+GE Sbjct: 104 KLDGLTIVLTYQDGHLVKAVTRGTGEEGEVITNNARVFRNLPVTIAYKGTL---ILRGEA 160 Query: 182 FLQREGHIQ--QQMGGINARAK----VAGLMMRQDDSDTLNSLGVFVWAWP----DGPQL 231 ++ I+ ++ + + K + +RQ ++ + V+ + + D +L Sbjct: 161 IIRYSDFIKINNEIADVGVKYKNPRNLCSGSVRQLNNKVTSERNVYFFGFSLVKADNVEL 220 Query: 232 MSDRLKE---LATAGFTLTQTYTRAVKNADEVARVRNEWWKAELP---FVTDGVVVRAAK 285 + R + L GF + N +E +W+ + F +DG+V+ + Sbjct: 221 DNSRASQMNWLKNQGFDIVDFKEVTSSNIEETV----QWFSQNIEANDFPSDGLVL-TFE 275 Query: 286 EPESRHWLPGQAEW---LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 + L A++ +A+K++ + + I+++ ++G I+ +A PV L+ Sbjct: 276 DIAYGESLGSTAKFPRDSIAFKWRDEIKETTLLNIEWSPSRTGLINPIAIFEPVELEGTT 335 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP--------- 393 V R +I ++ + ++ GD I V A IP+I + + R P P Sbjct: 336 VSRASIHNISIMEGLELGIGDTIGVYKANMIIPQISENLTRSG--MAPIPEECPVCKGKT 393 Query: 394 ----ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 EN +L C ++ C + I + + ++G+ EA L + + Sbjct: 394 EIKQENGVKTLYC--VNNECLAKQIKSFTHFVGRDAMNMEGLSEATLEKLIAKGLIKELA 451 Query: 450 SWLLLTPEQLQNT----PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L E+ +N G+ + +L N ARK R + ++GIP Sbjct: 452 D--LFHIEKYKNEILELEGLGEKSFNKLITSINKARKTTAVRLLYSLGIP 499 >UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetales RepID=D1BVV0_XYLCX Length = 830 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 94/395 (23%), Positives = 156/395 (39%), Gaps = 79/395 (20%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEI 181 K+DG+A+ L+Y G+L +A +RG+G GED T I+ VPQ + G A ++GEI Sbjct: 126 KIDGLAIALLYEHGRLTRAATRGDGRTGEDVTVNALRIADVPQQLDGEGHPALVEVRGEI 185 Query: 182 F-----------LQRE-----------------------------------------GHI 189 F LQ E G + Sbjct: 186 FIPTASFTRLNELQEELRARVVEDTRARQGARFDEEKARLAALRRFPTFANPRNAAAGGL 245 Query: 190 QQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQL--MSDRLKELATAGFTLT 247 +QQ+ + + AGL + ++ +G W + +L SD AT G ++ Sbjct: 246 RQQLDKKDGLERDAGLARIESLRLYVHGIGALQWEAGEHAELGRQSDAYSYFATWGLPVS 305 Query: 248 QTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHW--LPGQAEWLVAW 303 + R V D V + + + ++ DG+VV+ P+ + W +A+ Sbjct: 306 -PHNRVVNGIDAVIEMIEHFGAHRHDIEHELDGIVVKVDALPDQQRLGATSRAPRWAIAY 364 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 KY P + AIQ VG++G+ + A + PV++ V++ + + + + GD Sbjct: 365 KYPPEEVNTRLLAIQVGVGRTGRATPYAVMEPVLVAGSTVRQATLHNQDVVRAKGVRVGD 424 Query: 364 QILVSLAGQGIPRI--------DDVVWRG--------AERTKPTPPENRFN-SLTCYFAS 406 +++ AG IP I DD R E P P + L C A Sbjct: 425 VVVLRKAGDVIPEILGPVPAAADDGFPRHDFVMPAQCPECGTPLRPMKEGDVDLRCPNAR 484 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 C Q R+ +G++ L ++G+GE AL Q Sbjct: 485 S-CPAQVRGRVEHIGSRGGLDVEGLGEVAAAALTQ 518 >UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID=DNLJ_CYAP4 Length = 738 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 75/313 (23%), Positives = 130/313 (41%), Gaps = 41/313 (13%) Query: 269 KAELPFVTDGVVVRAAKEPESRHWLPGQ--AEWLVAWKYQPVAQVAEVKAIQFAVGKSGK 326 + +LP++TDGVVV+ H Q W +AWKY+P V EV I VG++G Sbjct: 343 RLDLPYMTDGVVVKLNSLRLQEHLGFTQKFPRWAIAWKYEPEQAVTEVLNISVNVGRTGA 402 Query: 327 ISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE 386 ++ VA L PV L V R + + R E D+ GD++++ AG+ IP I V Sbjct: 403 LTPVAELRPVQLAGTTVSRATLHNRDRLAELDLHIGDKVVIHKAGEIIPEILQVF----- 457 Query: 387 RTKPTPPENRFNSLTCYFASDVCQE----------QFISRLV--------------WLGA 422 PE R Y C E + ++R + W+G Sbjct: 458 ------PELRPADARPYQLPTHCPECGQPVVQPVDEAVTRCLNVSCPAIVRGAIVHWVG- 510 Query: 423 KQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARK 482 + + +DG+GE R L + LT QL + + ++ ++ Sbjct: 511 RDAMDIDGVGEKLVRQLVDRGLVNSVADLYRLTVAQLLTLERMGNKLAEKVVAAIAKSQS 570 Query: 483 QPFTRWVMAMGIPL---TRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKE 539 +P++R + +GI A + + S +L+ ++ + + + G G A+ +++W + Sbjct: 571 RPWSRVLYGLGIRHVGSVNAQVLTTAFPSVERLMAASAEDIEAVHGIGPEIAQSIVQWFQ 630 Query: 540 NAQIKKLGSWLAA 552 L L+A Sbjct: 631 TPANHSLIEQLSA 643 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 11/99 (11%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--GPLANSTLQGEI 181 K+DG A+ L Y +G L + +RG+G+ GED T V I ++P + P ++GE Sbjct: 138 KIDGSALALTYENGVLVRGATRGDGVYGEDITANVRTIRSIPLRLDWPDPPPIVEVRGEA 197 Query: 182 FL-----QREGHIQQQMGG---INARAKVAGLMMRQDDS 212 FL R ++Q G N R AG +RQ D+ Sbjct: 198 FLPLDVFHRLNQEREQAGESLFANPRNAAAG-TLRQLDA 235 >UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S561_PHYPA Length = 1163 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 86/353 (24%), Positives = 146/353 (41%), Gaps = 58/353 (16%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM------- 84 + + L++ I + Y G + D YD L L + +E + + Sbjct: 318 DRVETLRRVIADYSYQYHTLGNPLISDSAYDALVRELKDLESKLPAEASEESVTAKVGAP 377 Query: 85 PPLNGA-VMHPVAHTGVRKMVDKNALSLW---MRERSDLW------------VQPKVDGV 128 PPL A V H V + + ++ L W +++R + V+PKVDG+ Sbjct: 378 PPLEIAKVRHAVPMLSLAAVYKEDELKAWHERLQQRLNRMSNGEQPSTGAWVVEPKVDGI 437 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ-------GEI 181 A+TL+Y GKL A +RG+G +GED T + VP+ +S LQ GE+ Sbjct: 438 ALTLLYERGKLVCAATRGDGAEGEDVTHNARNLKGVPEVLSDHHKEINLQESVLEVRGEV 497 Query: 182 FLQ----REGHIQQQMGG----INARAKVAGLMM----RQDDSDTLNSLGVFVWAWPDG- 228 ++ +E + + GG N R AG M R D L+ + + + D Sbjct: 498 YMTLLDFQELNDMKVKGGEKPFANPRNATAGSMRILKNRDGDDRRLSFMAYAILSPEDNV 557 Query: 229 -------PQLMS---DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVT 276 P+L+ D L L F++ R + D+ W ++ L + + Sbjct: 558 SAGVETPPRLVRAQWDALNLLKQLDFSVNDD-NRKFASFDDALHYATRWRDSRSTLKYES 616 Query: 277 DGVVVRAAK-EPESRHWLPG-QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKI 327 DGVV + +++ + G W VAWK+ V ++ I+ ++G+SG I Sbjct: 617 DGVVFKINDLATQAKLGVVGSDPRWAVAWKFAATEVVTILEGIELSIGRSGAI 669 >UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXK5_RUMGN Length = 663 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 105/499 (21%), Positives = 203/499 (40%), Gaps = 44/499 (8%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR----CFGSEPRDVMMPPLNG 89 I L +Q+ ++ D Y+ E +S+V D YD+L L++ + + + P + + Sbjct: 20 IKELVEQLNEYRDAYYNEARSDVSDAEYDRLFDELSELENETGVVYTNSPTQSVGYEVKS 79 Query: 90 AV-----MHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 + HP+ K VD L + ++ D + K+DG+ L Y +G+L +A + Sbjct: 80 ELEKVKHSHPMLSLDKTKSVDD--LVKFAGDK-DCILSLKMDGLTCLLTYENGELVQAET 136 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG--HIQQQMGG----INA 198 RG+G GE T + +P ++ + ++GE + E I + + N Sbjct: 137 RGDGEIGELITHNAKVFENIPLSIDYK-GHFEIEGEAIITYEDFDKINKSLPDDKKYKNP 195 Query: 199 RAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMS----DRLKELATAGF-TLTQTYTRA 253 R +G +RQ DS + AW + S +RL+ GF T+ R Sbjct: 196 RNLASG-SVRQLDSKIAAQRHIKFIAWKVPTDIASSSFINRLQYALDIGFDTVPFLPIRG 254 Query: 254 VKNADEVARVRNEWWK--AELPFVTDGVVV--RAAKEPESRHWLPGQAEWLVAWKYQPVA 309 NA+ + V + K E F DG+V ES + +A+K+ + Sbjct: 255 NCNAEFINIVVEQLRKRAKEKSFPIDGLVATYNDITYGESLGMTGHHPKHSIAFKFAEDS 314 Query: 310 QVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSL 369 + ++ I++++GK+G ++ VA V L V R ++ ++ +E +I+ G + V Sbjct: 315 EETVLREIEWSIGKTGTLTPVAIFDSVDLAGTSVSRASLHNISIMKELNISIGSTVTVVK 374 Query: 370 AGQGIPRIDDVVWRGAERTKPTP-----------PENRFNSLTCYFASDVCQEQFISRLV 418 + IP+I + PT EN L C + C+ + + R+ Sbjct: 375 KNEIIPQIISCDANAMDADIPTTCPVCGGETRIVKENDSEVLMC--VNPHCKGKLLGRVS 432 Query: 419 WLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTPGIAKSKSAQLWHQ 476 +K+ + + G+ E + L + I L ++L G K +L Sbjct: 433 HFVSKKGMDISGLSEETIKKLIELGWITEITDIYNLDQYYDRLSTMSGFGKKSVDKLRTS 492 Query: 477 FNLARKQPFTRWVMAMGIP 495 ++ +++ ++ +P Sbjct: 493 IENSKTVRLDKFIASLSVP 511 >UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQQ1_9ACTO Length = 749 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 87/375 (23%), Positives = 153/375 (40%), Gaps = 59/375 (15%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----PLANST-LQ 178 K+DG+AV L Y +G L + +RG+G GED T V I+++P+ + G P+ ++ Sbjct: 126 KIDGLAVNLTYENGVLVRGATRGDGTTGEDITPNVRTIASIPEKLKGTKKYPVPEFVEIR 185 Query: 179 GEIFL--------------------------QREGHIQQQMGGI--NARAKVAGLMMRQD 210 GE+F+ + EG Q++ + N R AG + ++D Sbjct: 186 GEVFMSTESFEKLNADRLAENERITAANEERKAEGKRLQKLLPLYANPRNAAAGSLRQKD 245 Query: 211 DSDTLN---SLGVFVWAWPDG--PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN 265 + T + S+ V+ + G P S L G T +Y + + + V Sbjct: 246 PTITASRALSMTVYGFGARRGFEPTHQSQGYAALKAWGLP-TSSYFKVLDTVEGVTEYIE 304 Query: 266 EW--WKAELPFVTDGVVVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAV 321 + + ++ DGVV++ R W +A+KY P ++ I+ +V Sbjct: 305 HYGEHRHDIEHEIDGVVIKIDDIAVQRRLGSTTRAPRWAIAYKYPPEEVTTTLRDIKVSV 364 Query: 322 GKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV 381 G++G+ + A L PV + +V+ + + + + GD++++ AG IP + V Sbjct: 365 GRTGRATPYAVLEPVRVAGSEVEFATLHNQDIVKAKGVLIGDRVIIRKAGDVIPEVLGPV 424 Query: 382 --WRGAERTKPTPPENRFN-------------SLTCYFASDVCQEQFISRLVWLGAKQVL 426 R + + P N L C A C Q RL +L + L Sbjct: 425 EGARTGDEHEFVMPSNCPECGTELRQMSEGDIDLRCPNARS-CPAQLRERLSYLTGRSCL 483 Query: 427 GLDGIGEAGWRALHQ 441 +DG+G AL Q Sbjct: 484 DIDGLGYVACTALVQ 498 >UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDQ2_BRAFD Length = 871 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 116/512 (22%), Positives = 185/512 (36%), Gaps = 100/512 (19%) Query: 23 PAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC---FGSEP 79 P + AQ+ I+ L +I+Q DY++ + D YD+L L + +E Sbjct: 14 PRTADETAQQRIAALTARIEQARVDYYEHDAPTMADAEYDELEKELRALEEANPQLAAED 73 Query: 80 RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLW-MRE-----------RSDLWVQPKVDG 127 A P R N SL +RE + K+DG Sbjct: 74 SPTRTVGGAAAAGLPTIDHAERMQSLDNVFSLEELREWCAHAAAELGGEVRYLTELKIDG 133 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIF--- 182 +A+ L Y G+L A +RG+G GED T I +PQ +SG A ++GE+F Sbjct: 134 LAINLRYEHGELVTAATRGDGRTGEDVTVNALQIDGIPQRLSGSGHPALVEVRGEVFMPT 193 Query: 183 --LQREGHIQ-----------------QQMGG--------------------INARAKVA 203 +R +Q +Q G N R A Sbjct: 194 ADFERLNDLQVELRERAVAESRTRWESRQGSGRRPFDEQRESLAAARRFPTFANPRNTAA 253 Query: 204 GLMMRQDDSD-----------------TLNSLGVFVWAWPDGPQLMSDRLKELATAGFTL 246 G + +Q D T++ LG AWPD P + EL + Sbjct: 254 GGLRQQLDKKEGLEREAGEARLAALRLTVHGLG----AWPDPPVGSQSEMYELLASWGLP 309 Query: 247 TQTYTRAVKNADEVARV--RNEWWKAELPFVTDGVVVRAAKEPESRHW--LPGQAEWLVA 302 T Y V + DEVA + + +L DG+VV+ + R W +A Sbjct: 310 TSRYMDVVDSIDEVAAYVEHHGEHRHDLEHEIDGIVVKVDSFAQQRALGSTSRAPRWAIA 369 Query: 303 WKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPG 362 K+ P ++ IQ VG++G+++ + PV + V++ + + + + G Sbjct: 370 VKFPPEEVTTKLLDIQVQVGRTGRVTPFGVMEPVTVAGSTVEKATLHNQFDVERKGVLIG 429 Query: 363 DQILVSLAGQGIPRI---DDVVWRGAER------------TKPTPPENRFNSLTCYFASD 407 D I++ AG IP I + + G+ER T+ P C D Sbjct: 430 DTIVLRKAGDVIPEILAPVESLRDGSERPFVMPAQCPACGTEIRPEREGDKDWRCPNQRD 489 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRAL 439 C Q R+ G++ ++ +GE AL Sbjct: 490 -CPAQVTGRVEHAGSRGAFDIESLGEESAIAL 520 >UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 201phi2-1 RepID=B3FJJ3_9CAUD Length = 695 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 123/594 (20%), Positives = 233/594 (39%), Gaps = 87/594 (14%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA 90 + E L ++I+ ++ Y+ S + D +YDQL L ++ P V Sbjct: 4 RHEYDVLCKRIRHYNYMYYVLDISIIPDSLYDQLLISLKLLEK---EHPEWVTRDSPTQT 60 Query: 91 VMHPV--AHTGVRKMVDKNALSL-----------WMRE-RSDLWVQPK-----------V 125 V HPV +H + K V K LSL W + D++V K + Sbjct: 61 VGHPVYESHFELVKRV-KPMLSLDNLFTCDEAVDWSIDIHGDIYVGKKDESAEIVAEWKM 119 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS-TLQGEIFLQ 184 DG+++ + Y + A +RG+G GED T ++ +P+ + P +++GE+ ++ Sbjct: 120 DGLSLDVNYTYDTMELASTRGDGTTGEDVTPNAMVVEGIPRVLKTPRHGGVSIRGEVVVR 179 Query: 185 REGHIQ----QQMGG----INARAKVAGLMMRQDDSDTLNSLGVFVW------------A 224 + Q + G N R AG + ++D T VFV Sbjct: 180 LADYNQINADLEAAGKKTFANPRNYAAGSLRQKDPRITRERKLVFVAYSVERTLGDPEAT 239 Query: 225 WPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAA 284 W D + + A G L+ R + + + ++ PF DG+V + Sbjct: 240 WYDDQAWLKENGFYTADTGKRLSHD-QRGMTSGFPALIAECQAERSSYPFEVDGIVFKVV 298 Query: 285 KEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 K E+ + W A+K+ + ++ VG++GK++ +A + P+ + Sbjct: 299 KHTHRETLGYTSRFPRWGRAYKFPASKGETRLISVDRQVGRTGKLTPMARIEPIHVHGTT 358 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIP----RIDD------------------- 379 + V I +++ ++ + G + +S AG IP RI D Sbjct: 359 ISNVTIHNLKELEQHKLFEGCYVEISRAGDVIPYLERRITDHNGEKLYGEVEACPCCGTK 418 Query: 380 VVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRAL 439 VV ++TK P +R T Y + C+++ ++ L++ + VL + G+G+ L Sbjct: 419 VVVVHGKKTKENPEGSR----TEYCPNTKCKDRQVAHLLYCTQRHVLNIKGLGDELVMDL 474 Query: 440 HQTHRFE--HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQ-PFTRWVMAMGIPL 496 + + S L+L E G ++ + +L +A TR + A+GI Sbjct: 475 YNAGVVDVTRPLSLLMLKHEDFLKI-GQSERMAEKLAMAVTIASANLDLTRVITALGISG 533 Query: 497 T---RAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLG 547 A A + R+ ++ +T ++ G A+ + E+ + K G Sbjct: 534 AADGTAERLAREIRTLEEISIATIDRMLEIDDIGDVTAQSIFEFFDEDNRKPHG 587 >UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVM Length = 808 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 94/393 (23%), Positives = 153/393 (38%), Gaps = 53/393 (13%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARL----TQWQRCFGSEPRDVMMPPLNGAVM 92 L+ Q+ Y+ +E+ D YD L L +W + + A + Sbjct: 40 LRDQLNYHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVGDTVVAAL 99 Query: 93 HPVAHTGVRKMVDKNALSL---------WMRERSD----LWVQPKVDGVAVTLVYRDGKL 139 AHT +R NA S +R D W PK+DG+A+ ++Y +G Sbjct: 100 ETQAHT-LRMYSLDNAFSAEEWDGFIQRMLRAEPDAPTAFWCDPKMDGLALEVIYENGVF 158 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGP---LANSTLQGEIFLQREG----HIQQQ 192 A++RG+G KGE T + + +P + G A ++GE+ + R + ++ Sbjct: 159 TTALTRGDGEKGEIVTTAMRTVRNLPLRLHGEGPHPARLEVRGEVVITRAEFDALNAARR 218 Query: 193 MGG----INARAKVAGLMMRQDDSDTLN------SLGVFVWAWP-----------DGPQ- 230 G N R AG + + D S T + GV WP GP+ Sbjct: 219 GAGEKLFANPRNAAAGSVRQLDASVTAGRPLRFLAYGVGQVVWPAETSDGAASAAQGPEA 278 Query: 231 ---LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAA-- 284 + LA GF R A +A + ++ELPF DGVV + Sbjct: 279 RWATHGQVMAALADYGFGTPPDARRCETPAQVMAYYEDLGRRRSELPFDIDGVVAKLDDL 338 Query: 285 KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 + + W +A K+ ++ I VG++G ++ VA LAPV + V Sbjct: 339 SAQAALGYTARAPRWAIALKFPAHQATTRLEHIAIQVGRTGVLTPVAELAPVAVGGVTVS 398 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 R + + + D+ GD ++V AG IP + Sbjct: 399 RATLHNEDEIRAKDLRVGDMVVVQRAGDVIPEV 431 >UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate iridescent virus 6 RepID=VF205_IIV6 Length = 615 Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 89/356 (25%), Positives = 158/356 (44%), Gaps = 32/356 (8%) Query: 45 DDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMV 104 D Y+ K + D YD L+ +L + +V PL P+ + K+ Sbjct: 29 DHFYFNTEKEILTDNEYDILAEQL---------QSTNVGCSPLISKTDLPLWMGSLDKVY 79 Query: 105 DKNALSLWMRE-RSDLWV-QPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLIS 162 + L+LW+++ SD ++ Q K+DGV+ ++ +D KL KA +RGNG G D + LI Sbjct: 80 NDKELNLWIKKVASDKYIIQCKLDGVSCLIINKDNKL-KAYTRGNGKVGTDISH---LIK 135 Query: 163 AVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI-NARAKVAGLMMRQDDS---DTLNSL 218 + P N L+ EI +++E Q+ N R+ V+G++ R+ ++ LN L Sbjct: 136 YFIKDKCLP-NNIALRCEIIIKKETFNQKYKHAFSNPRSFVSGVVNRKQENIVISELNDL 194 Query: 219 GVFVWAWPDGP------QLMS--DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA 270 + + + P +++ + +++L F +T + ++ + E Sbjct: 195 CLIAYELINFPVNEYQKNILTQIEIIEQLNFIQFVNFKTISNEFLTQKALSNLFKEMKNN 254 Query: 271 ELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQ-PVAQVAEVKAIQFAVGKSGKISV 329 L F DG+V+ A P R G + +A+K + + A+V I++ VGK+G + Sbjct: 255 SL-FEMDGLVI-LANTPYIR-VTEGNPKHSIAFKVRGDNVKEAKVTFIEWNVGKTGVFTP 311 Query: 330 VASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA 385 + P ++ V + E I G ILV+ AG IP+I V G Sbjct: 312 KVHIVPTEINGTTVSCFTGFNANYLIEKGIGEGAIILVTRAGDAIPQIIGVKQTGV 367 >UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L1C3_9FIRM Length = 692 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 131/586 (22%), Positives = 237/586 (40%), Gaps = 99/586 (16%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP 85 S AR +E IS L + K Y++EG+ V + YD+ L ++ G V+ Sbjct: 41 SIARMKELISFLNEAAKA----YYQEGREIVSNLEYDKAYDTLLSLEKESGV----VLSG 92 Query: 86 PLNGAVMHPVAHTGVRKMVDKNALSL-WMRERSDL--WVQP-------KVDGVAVTLVYR 135 + V + VA ++ + LSL + DL ++Q K+DG+ + L Y+ Sbjct: 93 SPSQNVGYAVATALPKEAHETPMLSLDKTKSVEDLQSFLQGQEGILSWKLDGLTIVLHYQ 152 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL-ANSTLQGEIFLQREG--HIQQQ 192 +GKL KA++RGNG+ GE T+ +P + P + ++GE F+ I ++ Sbjct: 153 EGKLLKAVTRGNGIIGELVTENAKTFQNLPLQI--PFKGHLVVRGEAFISYSDFERINEE 210 Query: 193 MGGINARAK----VAGLMMRQDDSDTLN------SLGVFVWA-----WPDGPQLMSDRLK 237 + A+ K + +RQ D SL V A PD + + Sbjct: 211 LPEEGAKYKNPRNLCSGSVRQLDPKVTKERRVQISLFSLVLAEEEGKAPDFHNQHEEEFR 270 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELP---FVTDGVVV------------R 282 L GF++ R + NA+ + E+ K +P F +DG+V+ R Sbjct: 271 FLEKQGFSVVH---RKMVNAENIQEAVAEFSKL-MPKNDFPSDGLVLLYNDIAYGESLGR 326 Query: 283 AAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 AK P + +A+K+Q + ++ +++++ ++G I+ VA PV L+ Sbjct: 327 TAKFPRNA----------IAFKWQDEEETTKLLSVEWSPSRTGLINPVAIFTPVELEGTV 376 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC 402 V R ++ ++ ++ + GD+I V A IP+I G +TK E + C Sbjct: 377 VSRASLHNITYCEDLALGIGDEITVYKANMIIPQI------GENKTKSGNLEIPKHCPAC 430 Query: 403 ---------------YFASDVCQEQFISRLVWLGAKQVLGLDGIGE---AGWRALHQTHR 444 Y + C + I + ++ L ++G+ E W Sbjct: 431 QGETKIVKDKETKMLYCTNPHCPAKRIKQFALFVSRDALNIEGLSEMTLEKWLGRGFIQE 490 Query: 445 FEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNAS 504 F +FS L E++ G ++ A+ R + +GI + Sbjct: 491 FPDLFS-LEKYREEIIGMEGFGLKSFEKIQENIEKAKTSNLGRLLYGLGIEGIGVSNGRM 549 Query: 505 DERSWSQ----LLFSTEQFWQQLPGTGSGRARQVIEW---KENAQI 543 ++SQ L+ +T++ Q+ G G A + E+ +EN +I Sbjct: 550 LAEAFSQDPYKLMDATKEEILQVKGIGQVLADSIAEYFQKEENRRI 595 >UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNLJ_TREDE Length = 645 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 104/507 (20%), Positives = 207/507 (40%), Gaps = 62/507 (12%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM--PPLN 88 ++ I L++ IK+ D Y+ + E+ D +D L W +P++ + PL Sbjct: 4 EKRILDLEKTIKKHQDLYYN-AQPEISDAEFDAL------WDELKALDPQNKLFFTVPLE 56 Query: 89 GA-----VMHPVAHTGVRKMVDKNALSLWMRER--SDLWVQPKVDGVAVTLVYRDGKLNK 141 H + K D + W + + VQ K+DG ++ L Y +G + Sbjct: 57 STEGFAKSEHIIPMGSQEKAADPPSFEAWALKMPFKEYIVQYKMDGASLELQYEEGHFVR 116 Query: 142 AISRGNGLKGEDWTQKVSLISAVPQTVS---GPLANST-----LQGEIFLQREGHIQQQM 193 A++RG+G G+D T+ V + + + ++ GP + ++ E+ + R H + Sbjct: 117 AVTRGDGKIGDDITENVLKMKGLIKDITVNAGPAYGTKPFSGGIRCEVIMLRSIHQKYFK 176 Query: 194 GGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGP-----------QLMSDRLKELATA 242 N R GL M++ + + L +F + G + S++L L A Sbjct: 177 DKANCRNAANGL-MKKKNGELCEHLNLFAYDAVQGSIGRPFTGDAPFKTESEKLVWLKKA 235 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK-EPESRHWLPGQAEW 299 GF + + K+ EV R + L + DG+V++ +PE + E Sbjct: 236 GFNCVE--VKYCKSIAEVIEYRAHVMDIRPSLDYDIDGLVIKNDTIDPEDMKR--ARPEK 291 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKI-SVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 +A+K+ V +K I+++ +SG + +A + PV L V+R ++ + + + Sbjct: 292 QIAFKFSLEEAVTVLKEIEWS--ESGATYTPIALIEPVRLAGTTVKRASLANPNIIKALN 349 Query: 359 IAPGDQILVSLAGQGIPRID----------DVVWRGAERTKPTPPENRFNSLTCYFASDV 408 + G +++V+ G+ IP+I+ ++ + +P N L C S Sbjct: 350 LKIGSRVVVTKRGEIIPKIEALAENPPNVKEIEYPDTCSVCGSPLTNEGTRLYCPNMS-- 407 Query: 409 CQEQFISRL-VWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK 467 C + R+ W+ VL + G + L + R I LT E+L + K Sbjct: 408 CPKLIHHRIEKWI---SVLDIRDFGITLIKRLFEMGRVNSITDLYTLTVEELAAIDRMGK 464 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGI 494 + +++ + ++ T ++ I Sbjct: 465 LSAEKVYKALHSKKEISLTEFIAGFDI 491 >UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XV29_9BACT Length = 678 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 127/600 (21%), Positives = 233/600 (38%), Gaps = 96/600 (16%) Query: 40 QIKQWDDDYWK---EGKSEVE-DGVYDQLSARLTQWQRCFGSEPRD-VMMPPLNG-AVMH 93 Q+ + D Y+ E ++ E D +D+L A + + P + V L G H Sbjct: 15 QLNEASDAYYNGKGEAMTDFEWDAAFDRLKALEEELGEVLPNSPTNSVSADKLKGQKEEH 74 Query: 94 PVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGED 153 + K + L+ W ER +W+ K+DG+ + + Y +GKL K ++RGNG G + Sbjct: 75 EYPALSLAKTKSETELAKWAEERP-IWLSWKLDGLTLVVTYDNGKLTKVVTRGNGHIGTN 133 Query: 154 WTQKVSLISAVPQTVSGPLANSTLQGEIFLQ----REGHIQQQMGGINARAKVAGLMMRQ 209 T + I + TV + ++GE + + +++ + N R +G + + Sbjct: 134 ITHLAAAIDNILPTVKAN-GHIVIRGEAVISYADFEQFNLESEEEYANPRNLASGSLTLK 192 Query: 210 DDSDTLNSLGVFVWAW------PDGPQLMS--DRLKELATAGFTLTQTYTRAVKNADEVA 261 D +N + W +++S DR+ L GF + + A+ + Sbjct: 193 D----INEVKARHLRWIPFSLVHTDEEIISWGDRMAFLDKLGFNTVERELITLPTAENIE 248 Query: 262 RVRNEWW--------KAELPFVTDGVVVR------AAKEPESRHWLPGQAEWLVAWKYQP 307 +V W K + P+ DG+V+ AA + H +A + W+ + Sbjct: 249 KVIATWTLRVTDTTRKDKQPYPVDGLVITYDDTEYAATGSVTGHH-ATRAGFAFKWQDES 307 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA-PGDQIL 366 V E I+++ S IS VA PV L+ V+R ++ ++ + I G +++ Sbjct: 308 VETTLEY--IEWSCATS-TISPVAVFKPVELEGTTVKRASLCNISECERLGIGDAGTKLM 364 Query: 367 VSLAGQGIPRIDDVVWRGAERTKPTP------PENRFNS-----LTCYFASDVCQEQFIS 415 V A + IP++ V T PT P S T + + C + + Sbjct: 365 VIKANKIIPKVISVTECLGSFTIPTTCPVCHQPTQIVESEASGTRTLHCTNHHCPAKQLK 424 Query: 416 RLVWLGAKQVLGLDGIGE--------AGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK 467 + +K+ + +DG+ E GW + + +F L E L+ G + Sbjct: 425 KFARFVSKEGINIDGLSEQTVQKFINLGWVS-----EYADLFH-LQEKAEALKYMEGFGE 478 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLT--------------RAALNASDERSWS--- 510 L +RK + + A+ IPL +N S E S Sbjct: 479 KSCDNLLTAIEKSRKVEAKQLLFALSIPLVGKDVCTRLLSAYPLEELINKSRENMVSPTL 538 Query: 511 -QLLF-----STEQFWQQLPGTGSGRARQVIEWKEN----AQIKKLGSWLAAQQITGFEP 560 + LF + E+ + + G G ++ + W ++ AQ+++L L Q T EP Sbjct: 539 QRSLFEEPRPNNEEIFSTIDGIGPEKSASFVGWMQDDSNYAQLQRLLQELTVSQ-TSSEP 597 >UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C379D5 Length = 685 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 107/511 (20%), Positives = 208/511 (40%), Gaps = 58/511 (11%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR-----CFGSEPRDVMMPPLN 88 + L + + + D Y+ G + D YD+L L + ++ GS + V Sbjct: 43 MKELNELLAKAADSYYNTGVEIMSDHEYDELYDELEKLEKETGVILNGSRTQQVGFEV-- 100 Query: 89 GAVMHPVAHTGVRKMVDK----NALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 + + V HT +DK + L+ W+ ++ K+DG+ + L + +G L +A++ Sbjct: 101 ASSLTKVKHTSRMLSLDKTKSIDELTEWLGGHEG-FLSWKLDGLTLVLTFDNGTLTQAVT 159 Query: 145 RGNGLKGEDWTQKVSLISAVPQTV--SGPL---ANSTLQGEIFLQREGHIQQQMGGINAR 199 RGNG GED T I +P + G L S ++ + F + I+ N R Sbjct: 160 RGNGETGEDITMNARHIIGIPAKIPFEGHLVVRGESLMKYKDFERVNSLIEDGSKYKNPR 219 Query: 200 AKVAGLMMRQDDSDTLNSLGVFVWAW----PDGPQLMS--DRLKELATAGF-TLTQTYTR 252 G +R DS + +A+ DG + S +R++ L + GF T+ Sbjct: 220 NLCVG-TVRNLDSKVTAERNINFFAFNLVSADGYESNSFAERIQWLNSLGFQTVYGVKVD 278 Query: 253 AVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWL----VAWKYQPV 308 + A++VA + E P +DG+V+ R G+ +A+K++ Sbjct: 279 SSVLAEKVAEFEKDIVNNEFP--SDGLVLMLDDVAYGRSL--GETSHAPRNGMAFKWRDE 334 Query: 309 AQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVS 368 ++ I+++ ++G ++ VA PV L+ V R ++ +V ++ + GD + + Sbjct: 335 TADTTLREIEWSASRTGLLNPVAIFDPVELEGTTVSRASVHNVSIVKQLKLGIGDTLSIY 394 Query: 369 LAGQGIPR------------IDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISR 416 A IP+ I +V E+T+ ++ +L C + C + I R Sbjct: 395 KANMIIPQVLENKTGSASAAIPEVCPICGEKTEIKTSDDDVETLFC--TNKECPAKHIGR 452 Query: 417 LVWLGAKQVLGLDGIGEAGWRA------LHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKS 470 + + + G+ A + + F H+ + E++ G + Sbjct: 453 FEHFVQRDAMNIVGLSTATIETFVSEGFVKKYSDFYHLDRF----REKIVTMEGFGERSY 508 Query: 471 AQLWHQFNLARKQPFTRWVMAMGIP-LTRAA 500 ++ +R +R + A+GIP + RAA Sbjct: 509 QKMQEAVEASRHTEMSRILYAVGIPNIGRAA 539 >UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM Length = 647 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 111/510 (21%), Positives = 204/510 (40%), Gaps = 48/510 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPL 87 R E I L + K + D + + D +YD+L A + + P V + Sbjct: 5 TRMNELIDILSKANKAYYSDANEIMSNREYDELYDELQALEEESGIVLAASPT-VNVGYE 63 Query: 88 NGAVMHPVAHTGVRKMVDKNA------LSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNK 141 + + +AH +KM+ N L W+ E+ L + PK+DG+ V + Y +G L Sbjct: 64 ASSSLEKMAHE--KKMLSLNKTKSVDELVEWLGEQEGL-LSPKLDGLTVVITYDEGSLKL 120 Query: 142 AISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS-TLQGEIFL------QREGHIQQQMG 194 A++RG+G++GE T+ +P + P A L+GE ++ + I Sbjct: 121 AVTRGDGVEGEVITKNAKTFIGIPLKI--PYAGRLVLRGEAYITYGDFNKLNEEIDDAAK 178 Query: 195 GINARAKVAGLMMRQDDSDTLNSLGVF-VWAWPDGPQLMSDRLKE----LATAGFTLTQT 249 N R +G + D S T F V++ G + ++ +E L GF + T Sbjct: 179 YKNPRNLCSGSVRNLDPSITKERRVRFKVFSMLGGIEHGFNKKRECMKWLGDIGFDVVHT 238 Query: 250 YTRAVKN-ADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEW---LVAWKY 305 +N D + + E ++P DG+V+ + ++ + L A++ +A+K+ Sbjct: 239 EMVTGENLKDTMNSLMEELQNGDIP--VDGLVL-TYDDIKTCNLLGETAKYPKDSIAFKW 295 Query: 306 QPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQI 365 E+ +++ ++G ++ VA +PV + V+R + ++ + GD+I Sbjct: 296 SDELYDTELTGVEWNTSRTGLVNPVAVFSPVEISGTTVKRAALHNLDILDGLALGKGDKI 355 Query: 366 LVSLAGQGIPRIDDVVWRGA--ERTKPTP--------PENRFNSLTCYFASDVCQEQFIS 415 V A IP++ + + R E K P L C +D C + Sbjct: 356 RVYKANMIIPQVYENITRSGNIEYPKVCPVCGCGLKLETEGARVLRC--VNDDCPAKNAK 413 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQL 473 R+V K + + GI E L T + L + +++ G + L Sbjct: 414 RIVHFAGKSGINIKGISEKTIEKLIATGIIRNEVDLLDIENYKDEILKLDGFKEKSFENL 473 Query: 474 WHQFNLARKQPFTRWVMAM---GIPLTRAA 500 + A+ R++ AM GI T A Sbjct: 474 KKAIDGAKTMTLQRFISAMAFTGIGYTNAG 503 >UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 4222 RepID=C3IV00_BACTU Length = 656 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 91/436 (20%), Positives = 179/436 (41%), Gaps = 54/436 (12%) Query: 96 AHTGVRKMVDKNALSLWMRE--RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGED 153 + GVRK V+ RE + ++ K+DG+A L Y G ++ +RG G GE Sbjct: 87 TYDGVRKFVED-----VKREFPNATFTIEQKMDGLANVLRYSGGSFSEGRTRGTGKIGEI 141 Query: 154 WTQKVSLISAVP-----QTVSGPLANSTLQGEIFLQREGHIQQQMGGI--------NARA 200 ++++ I ++P Q V P +GE+F+ G + + N R Sbjct: 142 VSEQIKTIRSIPLNIRFQGVIEP------RGEVFMPISG-FEAYNASLPEGEAPLKNPRN 194 Query: 201 KVAGLMMRQDDSDTLNS-LGVFVW--AWPDGP--QLMSDRLKELATAGFTLTQTYTRAVK 255 AG + D + L F + A+ +G + ++ + L GF + + V Sbjct: 195 GAAGALRNLDPRIAASRPLDAFWYDIAYSEGITFETQAEMMTFLQEQGFKINPYF--YVT 252 Query: 256 NADEVARVRNEWWKAELPFVT---DGVVVRAAKEPESRHWLPGQAE---WLVAWKYQPVA 309 ++ +V + E K P + DG+V++ E R L ++ W +A+K++ V Sbjct: 253 DSIDVIIEKLEEMKEVRPTLNWDIDGMVIKV-NELHIREELGYTSKFPKWAIAYKFEAVE 311 Query: 310 QVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSL 369 + + ++ + VG++GK++ +A L PV + V + + + + G ++ V Sbjct: 312 ETTTLNSVTWEVGRTGKLTPLAHLEPVDIGGTTVTKATLNNYDDILRKGVKVGAEVFVRR 371 Query: 370 AGQGIPRIDDVVWRGAERTKPTPPEN----------RFNSLTCYFASDVCQEQFISRLVW 419 + IP I +V G+E T+ PP + L C D C Q + + Sbjct: 372 SNDVIPEIMGIV-EGSEGTEIVPPTHCPECETVLVQDGAHLRC-MNIDSCSAQSVGKFTH 429 Query: 420 LGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL-LTPEQLQNTPGIAKSKSAQLWHQFN 478 +++ + +D E L + + F L L +L + K+ +L Sbjct: 430 FASREAMNIDSFSEKTAEQLFEAGLIRNSFVDLYRLDRNELLKLDRFGERKADRLLAAIE 489 Query: 479 LARKQPFTRWVMAMGI 494 ++ + ++ A+G+ Sbjct: 490 ESKSRTLEAFIYALGM 505 >UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q1ZXG5_DICDI Length = 843 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 51/252 (20%), Positives = 104/252 (41%), Gaps = 33/252 (13%) Query: 277 DGVVVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DG+V++ R + W A+K+ ++++ +K I VGKSG+I+ VA + Sbjct: 419 DGIVIKVNDINIQRILGDINRSPRWAFAYKFGAKSEISTIKDIVLQVGKSGRITPVALVE 478 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI----DDV---------- 380 P+ + + R + ++ + +I G ++L+ AG IP+I DD Sbjct: 479 PIQVHGVTISRATLNNLSYINKLNIKIGSKVLIERAGDVIPKIITNLDDNINNTNTNTNT 538 Query: 381 --------VWRGAERTKPTPP-------ENRFNSLTCYFASDVCQEQFISRLVWLGAKQV 425 +++ E P NR + + ++ C Q + ++ W K+ Sbjct: 539 NNTNNIESLFKCNENGNILCPCNLKSELVNRVGYVDYFCVAENCPNQLVQQISWFVDKKA 598 Query: 426 LGLDGIGEAGWRALHQTHRFEHI--FSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQ 483 + + G+G++ + L + E L E+L + G + +K L ++ + Sbjct: 599 MNIQGVGKSQIQVLLENQLIEDFGDLYELYQFKEKLLSLKGFSHTKVNNLLESIEDSKSR 658 Query: 484 PFTRWVMAMGIP 495 + A+GIP Sbjct: 659 GLASLLCAIGIP 670 >UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVH Length = 799 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 100/410 (24%), Positives = 162/410 (39%), Gaps = 67/410 (16%) Query: 24 AWSPAR-------AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARL----TQWQ 72 A SPAR A++ ++L+ +++ + Y++ E+ D YD L L T+W Sbjct: 26 ATSPARHDAIPEEARQRAAQLRADLERHNRLYYELDTPEISDAEYDALYRELVGLETRWP 85 Query: 73 RCFGSEPRDVMMPP--LNGAVMHPV---AHTGVRKMVDKNALS-------------LWMR 114 RD P + G V+ + AHT +R NA S Sbjct: 86 AL-----RDEASPTQRVGGEVLEGLEKQAHT-LRMYSLDNAFSRDEWGAFIQRMYNALPD 139 Query: 115 ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN 174 S W PK+DG+A+ ++Y +G A++RGNG GE T + + +P + G Sbjct: 140 APSAFWCDPKMDGLALEVIYENGVFTSALTRGNGEVGEVVTAAMRTVRNLPLALRGDDVP 199 Query: 175 STLQ--GEIFLQRE-----GHIQQQMGG---INARAKVAGLMMRQDDSDTLN-------- 216 ++ GE+ + + Q GG N R AG + + D + T Sbjct: 200 RRIEVRGEVVIAKADFEQLNARQSAAGGKLFANPRNAAAGSVRQLDTTVTAGRPLQFLAY 259 Query: 217 SLGVFVWAWPDGP-QLMSDRLKELATAGFTLTQTYTRAVKNADEV------ARVRNEWWK 269 +G V P S + L GF T R + DEV R E Sbjct: 260 GVGQVVLEGGTAPWTTHSGLMARLREWGFD-TPPEGRLCASPDEVWAYYEALGARRESLA 318 Query: 270 AELPFVTDGVVVRA--AKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKI 327 E+ DGVV + + E+ + W +A K+ + + I+ VG++G + Sbjct: 319 IEI----DGVVAKLDDTEAQEALGFTARAPRWALALKFPAMQARTRLDDIRVQVGRTGVL 374 Query: 328 SVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 + VA L PV + +V R + + + + GD +LV AG IP + Sbjct: 375 TPVAILEPVRVGGVEVSRATLHNEDEIRAKGLMLGDMVLVQRAGDVIPEV 424 >UniRef50_Q7R767 DNA ligase, NAD-dependent, putative (Fragment) n=1 Tax=Plasmodium yoelii yoelii RepID=Q7R767_PLAYO Length = 354 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 16/160 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPR 80 PA E+ +L+++I+ + Y++ + D YD+L A L + + S + Sbjct: 184 PAEVVEKARKLREEIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQ 243 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-RSDLW-------VQPKVDGVAV 130 V PP+ V H V + + L+ + R R +L +PK+DG+AV Sbjct: 244 RVGAPPVEAFTEVRHEVPMLSLENAFSEEDLTAFDRRVRKELSRDTLEYVAEPKLDGLAV 303 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG 170 L+Y+DG L +A +RG+G GED T V + A+P + G Sbjct: 304 NLLYQDGVLVRAATRGDGEVGEDVTHNVRAVRAIPLRLKG 343 >UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=DNLJ_ERYLH Length = 736 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 26/167 (15%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP 85 S A A E+ RL +QI + D Y E E+ D YD L R + + F P V Sbjct: 9 SEAEAANELMRLARQIAKHDRLYHAEDAPEITDQEYDALVRRNAELEAAF---PHLVRED 65 Query: 86 PLNGAVMHPVAHT-------GVRKMVDKNA----------------LSLWMRERSDLWVQ 122 + V H VA + VR M NA L++ E + Sbjct: 66 SPSRKVGHAVAASPLSKVTHEVRMMSLDNAFADEEVAEFVARVRRYLNIGEDEAIAFTAE 125 Query: 123 PKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS 169 K+DG++ +L Y +GKL +A +RG+G GED T V+ I +PQ ++ Sbjct: 126 DKIDGLSCSLRYENGKLVRAATRGDGQVGEDVTPNVAHIGDIPQELT 172 Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 13/178 (7%) Query: 269 KAELPFVTDGVVVRAAK-EPESRHWLPGQA-EWLVAWKYQPVAQVAEVKAIQFAVGKSGK 326 +A+LP+ DGVV + + + + R +A W +A K+ ++ I VG++GK Sbjct: 334 RADLPYEIDGVVYKVDRLDYQQRLGFVAKAPRWAIARKFPAEQAETTLENIDIQVGRTGK 393 Query: 327 ISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE 386 ++ V LAPV++ V V + + + + PGD+++V AG IP++ + + Sbjct: 394 LTPVGRLAPVLVGGVTVTNVTLHNRDEIERLGVRPGDRVVVQRAGDVIPQVVRNLTPDEK 453 Query: 387 RTK----PTPPENRFNSLTCYFASDV-------CQEQFISRLVWLGAKQVLGLDGIGE 433 R T PE +++ DV C Q RL ++ L +DG+GE Sbjct: 454 RDSFEFPDTCPECGSEAVSEEGGVDVRCTGGLICPAQRTERLKHFVSRAALDIDGLGE 511 >UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_SANKS Length = 871 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 77/349 (22%), Positives = 141/349 (40%), Gaps = 41/349 (11%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS----TLQG 179 K+DG+A+ L+Y G+L +A +RG+G GED T V I +P+ + + ++G Sbjct: 154 KIDGLAIALLYEKGRLVRAATRGDGRTGEDVTLNVLTIEGIPKALDASVREVPDLIEIRG 213 Query: 180 EIFL---QREGHIQQQMGG-----INARAKVAGLMMRQDDSDT------LNSLGVFVWAW 225 E+F+ Q + Q+ N R AG + +++ T + + GV W Sbjct: 214 EVFMLVDQFAALNEAQVAAGKPPFANPRNAAAGSLRQKNPKITAGRPLRMYAHGVGALHW 273 Query: 226 ----PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGV 279 P + SD G ++ + R V+ V + + + + ++ DG+ Sbjct: 274 EAGTPSELRRQSDAYDYFRAWGVPVSD-HNRVVEGMPGVQEMIDYYGDHRHDIEHELDGI 332 Query: 280 VVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVM 337 VV+ + R W +A+KY P + I VG++G+++ + PV+ Sbjct: 333 VVKVDELALQRQLGATSRAPRWAIAYKYPPEEVNTTLLDILVNVGRTGRVTPFGMMEPVL 392 Query: 338 LDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAER--TKPTP 392 + V + + + + GD +++ AG IP I V G+ER PT Sbjct: 393 VAGSTVSMATLHNGSEVRRKGVLIGDTVVLRKAGDVIPEIVGPVVDLRDGSEREFVMPTE 452 Query: 393 PENRFNSLTCYFASDV---------CQEQFISRLVWLGAKQVLGLDGIG 432 + +L DV C Q R+ L + ++ +G Sbjct: 453 CPSCGTTLAPAKEGDVDIRCPNQRSCPSQLRERVFHLAGRGAFDIEAMG 501 >UniRef50_A2BXE3 NAD-dependent DNA ligase N-terminus n=8 Tax=Prochlorococcus marinus RepID=A2BXE3_PROM5 Length = 251 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 71/269 (26%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVA 96 L+++I +W D ++ G + D +DQL A L + ++P A Sbjct: 5 LEERI-EWYDHNYRMGTPLISDVQFDQLEANLYR---------------------VNPKA 42 Query: 97 HTGVRKMV------DKNALSLWMR---ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGN 147 + +K + K+ +S ++ + L ++PK+DG A+ + Y DG+L KAISR Sbjct: 43 NYFHKKSILPLPSLPKDKISEFLEGLLPNTRLIIEPKIDGCAIGIQYIDGQLIKAISR-- 100 Query: 148 GLKGEDWTQKVSLISAVPQ--TVSGPLANSTLQGEIFL----QREGHIQQQMGGINARAK 201 KG+D T K+ I VP V G + ++GE+F +R + Q++ GG Sbjct: 101 --KGDDVTNKIKEILDVPNEIKVKGLIQ---VRGELFAPLENERPTYSQRKAGGY----- 150 Query: 202 VAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKE------LATAGFTLTQTYTRAVK 255 L +D L+ G Q+++ RL E L GFT+ + +++K Sbjct: 151 ---LRNEASKNDHLSFCGF---------QIINGRLNEHDSLVYLKKLGFTIPE--YKSLK 196 Query: 256 NADEVARVRNEWWKAEL--PFVTDGVVVR 282 +V R +W + +L + TDG+VV+ Sbjct: 197 YLTQVEMYRKQWAEKKLFTQYPTDGIVVK 225 >UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQN7_9GAMM Length = 652 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 70/290 (24%), Positives = 118/290 (40%), Gaps = 32/290 (11%) Query: 104 VDKNALSLWMR-ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLIS 162 V+ A +L +R E + PK+DG+A + DG+L ++RGNG G D + Sbjct: 114 VEVAAEALGIRSETLTFRMTPKLDGIA-GMQRPDGRL---VTRGNGFAGADISHAFERGL 169 Query: 163 AVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFV 222 P P + E+F Q E I+ G + R VAG + +DT+ Sbjct: 170 RTPDGSMEPGPGELVLEEMFFQDE--IRVAFGMPHPRNFVAGFV----GADTVKP---HH 220 Query: 223 WAWPDGPQLMSDRLKEL----ATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDG 278 D ++ ++L A+A + R E + +P+ TDG Sbjct: 221 QKAADAQAIIFFPYRQLPAWQASAAVVMASWQERM------------EALRQAVPYRTDG 268 Query: 279 VVVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPV 336 VV+ E H W VA K + V+ I+ G++G+I+ V PV Sbjct: 269 VVLEVTDETVKAHMGSTSHHHRWRVALKTKGEVAHVRVRDIRIQTGRTGRITPVLEFDPV 328 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE 386 +L ++ V + + + G +I +S AG IP+++ V+ +E Sbjct: 329 LLTGARISNVTAHTAANLAQQGLGVGAEIEISRAGDVIPKLERVLEPASE 378 >UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JLD8_9ALTE Length = 490 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 111/499 (22%), Positives = 200/499 (40%), Gaps = 90/499 (18%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN------- 88 ++++ +++ +D Y S + D YD L L + +P ++ + Sbjct: 20 QIEESLERANDAYRNTDDSIISDSDYDALIDELARR------DPGHALLTEVESEADFGA 73 Query: 89 GAVMHPVAHTGVRKMVDKNALSLWMRERSD------------LWVQPKVDGVAVTLVYRD 136 G V H + K+ + LS W+R L V K+DG+A L +D Sbjct: 74 GKVRHQIPMLSTEKVKTDSELSAWVRRVESAAQNIGIRTPVLLSVTAKLDGMAGRL--KD 131 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQR--EGHIQQQMG 194 G L SRG+GL G + T +P+ V + + L + +Q + H+ ++ Sbjct: 132 GVL---ASRGDGLTGNNITH------ILPKLVVHGVGDGEL---VMIQSYFDEHLSEEFK 179 Query: 195 GINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAV 254 + R V G + +DT P + ++D + TLT+ +R Sbjct: 180 --HPRNVVTGAV----GADT---------PRPAAMKALNDHSIHFVSF-TTLTRIDSRTD 223 Query: 255 KNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAE---WLVAWKYQPVAQV 311 ++ +R E+ P+ TDG+V+ A + PE R L W+VA K Sbjct: 224 TIVAQLPEIR-EYLLGNTPYPTDGLVL-AVESPELRKELGSTGHHHNWMVAAKTVGETAT 281 Query: 312 AEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAG 371 V +Q+ +GK+G+++ V L V L + V + + +E I G ++ +G Sbjct: 282 TAVVGVQWQIGKTGRLTPVIQLKKVTLSGAVIANVTGHNAGKVEEMGIDVGAMATITRSG 341 Query: 372 QGIPRIDDVV--WRGAERTKPTPP-----ENRFNSLTCYFASDVCQEQFISRLVW----L 420 + IP + GA P + R + L C ++ C+ + +RL + Sbjct: 342 EIIPFLVSATPAPNGASLPTHCPACTEHLKRRGDFLVCI--NNECEGRRHARLHHFFNII 399 Query: 421 GAKQVLG---LDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQF 477 G+ + G D + AG R++ + +F+ E + PG +SA L + Sbjct: 400 GSIDLFGPVACDKLIAAGVRSIQE------VFAITAAEFEAMGFGPG----QSANLVAEL 449 Query: 478 NLARKQPFT--RWVMAMGI 494 A+ +P R + AMGI Sbjct: 450 EAAKTRPVDDFRVLAAMGI 468 >UniRef50_A3PEJ6 NAD-dependent DNA ligase N-terminus n=4 Tax=Prochlorococcus marinus RepID=A3PEJ6_PROM0 Length = 249 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 32/243 (13%) Query: 43 QWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRK 102 ++ D+ ++ G+ + D + QL + EP N ++ +A ++ Sbjct: 10 KYLDEQYRIGEGIISDDAFKQLEKLFIPVDQ----EPN--YFNQKNNKLLPKLAKENYKE 63 Query: 103 MVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLIS 162 ++ SL + R L +QPK+DG A+ + Y DGK NKAI++ KG D + K+ I Sbjct: 64 FLE----SLLTKTR--LSIQPKIDGCAIAIRYLDGKFNKAITK----KGFDVSSKIKQIK 113 Query: 163 AVPQTVSGPLA-NSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVF 221 VP + P+ + ++GE++ Q+ GI+ R L D SL Sbjct: 114 NVPDYI--PIKRDFQIRGELY------ATNQVAGISQRITRKYL---NDKKGIGESLRFC 162 Query: 222 VWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAEL--PFVTDGV 279 + +G + L L GF+ +Y + E+ + W + ++ + T+G+ Sbjct: 163 CFQILNGRLNQYETLNYLKKCGFSTPDSY--FTNHTSEIQIYKKNWLERKIFAKYPTNGI 220 Query: 280 VVR 282 VV+ Sbjct: 221 VVK 223 >UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation domain protein n=1 Tax=uncultured marine microorganism HF4000_001N02 RepID=B3T074_9ZZZZ Length = 727 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 16/163 (9%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDVMMPPL 87 I L Q + D Y+ E + D YD L L + GS+P P Sbjct: 15 IEELAQLLAHHSDLYYNEAAPVITDAEYDLLFDELKRLDPTHPQLDRVGSDP-----APG 69 Query: 88 NGAVMHPVAHTGVRKMVDKNALSLWMRERS----DLWVQPKVDGVAVTLVYRDGKLNKAI 143 + V H + K + +S ++ + + QPK+DG A++L YR G+L +A Sbjct: 70 SVKVEHLFPMQSLDKASEVAEISHFVAQTTAHGRRFVCQPKLDGSALSLEYRRGRLVRAA 129 Query: 144 SRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQRE 186 +RGNG +GED T I +P+++ G + ++GE+ + E Sbjct: 130 TRGNGERGEDVTANARRIPNIPESL-GWDGDCHIRGEVVMPLE 171 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 8/132 (6%) Query: 277 DGVVVRAAKEPESRHWLPGQAE---WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DGVV++ E R L A W +AWK+ P + + + G++G ++ VA + Sbjct: 295 DGVVIKL-DEFRKRELLGKTAHHPRWALAWKFPPEEATTVLLGVDWQTGRTGTVTPVARV 353 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP 393 APV + V+ + + + I+ GD++ ++ G IP+I +V+ Sbjct: 354 APVRVSGVTVENTTLHNAGEIERLGISVGDRVRITRRGDVIPKIVEVLGEATSADL---- 409 Query: 394 ENRFNSLTCYFA 405 +NRF++ FA Sbjct: 410 DNRFHADGTPFA 421 >UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VLG0_9BACT Length = 673 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 99/495 (20%), Positives = 189/495 (38%), Gaps = 75/495 (15%) Query: 115 ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPL 172 E +W+ K+DG+ + + Y +GKL K ++RGNG G + T + I + QT+ G L Sbjct: 91 ENKPIWLSWKLDGLTLVVTYDNGKLTKVVTRGNGHIGTNITHLSTAIDGILQTIPYKGHL 150 Query: 173 ANSTLQGEIFLQREGHIQQQMGG----INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG 228 ++GE + Q M N R +G + +D +N + W Sbjct: 151 V---IRGEAVISYPDFEQFNMEAEEEYANPRNLASGSLTLKD----INEVKARHLRWIPF 203 Query: 229 PQLMSD--------RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWK-------AELP 273 + ++ R++ L GF + + + V + W + + P Sbjct: 204 TLVYTEEEINSWGGRMEWLEHQGFRVVDRELIEQPTVNNIEAVIHHWTERVTGVSSSPFP 263 Query: 274 FVTDGVV------VRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKI 327 + DG+V V AA + H A+K+Q + E+ I+++ S I Sbjct: 264 YPVDGLVISYEDTVYAATGSVTGHHATRAG---YAFKWQDESAETELDYIEWSCAAS-TI 319 Query: 328 SVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA-PGDQILVSLAGQGIPRIDDVVWR-GA 385 S VA P+ L+ V+R ++ ++ + I G +I V A + IP++ +V+ G Sbjct: 320 SPVAVFRPIELEGTTVKRASLCNISECERLGIGDKGTKIAVIKANKIIPKVINVIESVGT 379 Query: 386 ERTKPTPPENRFNSLTCYFASDV-----------------CQEQFISRLVWLGAKQVLGL 428 T P C+ A++V C + + + +K+ + + Sbjct: 380 FHIPETCP-------VCHSATEVSESEVSGTRTLHCTNTHCPAKQLKKFGRFVSKEGVNI 432 Query: 429 DGIGEAGWRALHQ---THRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPF 485 DG+ E + + +F L +L+ G +L AR Sbjct: 433 DGLSEQTVQKFINLGWVREYADLFH-LTEHATELRTMEGFGNKSVTKLLAAIEKARNVEA 491 Query: 486 TRWVMAMGIPL-----TRAALNAS--DERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWK 538 R + A+ IPL L+A +E + + + E + + G G ++ + W Sbjct: 492 RRLLFALNIPLVGQDVCNRLLSAYPLEELIKTAIESAAEDVFSTIAGIGPEKSASFVRWM 551 Query: 539 ENAQIKKLGSWLAAQ 553 ++ + + L A+ Sbjct: 552 KDTDNQSMLQHLLAE 566 >UniRef50_B6K9G1 NAD-dependent DNA ligase OB-fold domain containing protein n=3 Tax=Toxoplasma gondii RepID=B6K9G1_TOXGO Length = 1094 Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 45/199 (22%) Query: 299 WLVAWKY-QPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 W A K+ QP A +++++ F+VG+ G + VVA+L PV + V R ++G++ Sbjct: 436 WAFARKFPQPFA-LSKIRDFVFSVGQFGSVHVVAALEPVRFGNLTVCRASVGTLETLSRR 494 Query: 358 DIAPGDQILVSLAGQGIPRIDDV------------------VWR-----GAERTKPTPPE 394 +A GD++ V L+G P I + WR G R++ E Sbjct: 495 QLAVGDEVYVHLSGHTTPLIVGIKEALGGSLEGRGSRAGCEAWRLRKNGGETRSERPQAE 554 Query: 395 NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALH--------QTHRFE 446 C+ + VC S+ G +G G AG ++ H +T R Sbjct: 555 EANEKEICFLSESVCASHSRSQ----------GTEG-GTAGVQSRHRECNLIDKETCRDR 603 Query: 447 HIFSWLLL-TPEQLQNTPG 464 S LLL +P ++TPG Sbjct: 604 TSASGLLLGSPAAAEHTPG 622 >UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=DNLJ_MIMIV Length = 636 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 17/200 (8%) Query: 18 VWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQ---RC 74 +WA+ P+ + +E +S + Y G S + D YD L RL + + Sbjct: 13 LWAILPSLNATDIEEALSVSSEY-------YHNTGTSLISDQEYDILMDRLKELNPSSKI 65 Query: 75 FGSEPRDVMMPPLNGAVMHPVAHTGVRKM-VDKNALSLWMRERSDLWV-QPKVDGVAVTL 132 F V P V P + K+ D+ A++ W+ E S +V K+DG++ L Sbjct: 66 FAQ----VGAPVKGKKVKLPFWMGSMNKIKADEKAVNKWLNEYSGPYVISDKLDGISCLL 121 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 ++ K K +RG+G G+D T + LI+ + + ++GE+ + ++ + Q Sbjct: 122 TIKNNK-TKLYTRGDGTYGQDITHLLGLINIDIGLLEEIDQDIAIRGELIMSKKNFEKYQ 180 Query: 193 MGGINARAKVAGLMMRQDDS 212 NAR V G++ + +S Sbjct: 181 EIMANARNMVGGIVNSKPES 200 >UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J8R2_ACIF2 Length = 609 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 39/249 (15%) Query: 144 SRGNGLKGEDWTQKVSL-ISAVPQTVSGPLANSTLQGEIFLQR---EGHIQQQMGGINAR 199 +RGNGL+GED + + + V V GP GEI + + E H+ +G + R Sbjct: 121 TRGNGLQGEDIGKAFARGLKIVGADVDGP-------GEIVMPKDFFEEHLVP-LGFKHPR 172 Query: 200 AKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRL-KELATAGFTLTQTYTRAVKNAD 258 + G + + D RL KE A F R + D Sbjct: 173 NFMVGFVGADTEKD-------------------HHRLVKESGMAHFVPYANLPRFYADKD 213 Query: 259 EVAR---VRNEWWKAELPFVTDGVVVRAAKEPESRHWLPG---QAEWLVAWKYQPVAQVA 312 + R +E + P+ TDG+V+ +EPE R L W +A+K + Sbjct: 214 TILRDIAYISEDIRKNTPYDTDGIVIEV-EEPELRAALGSTNHHHRWQIAYKTKGETAET 272 Query: 313 EVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQ 372 V + + G++G+I+ V + PV L ++R + ++ ++ + G ++ + +G+ Sbjct: 273 TVTGVVWQTGRTGRITPVIEIDPVELSGATIRRATAHNFQKARKDGLGVGSRVTMIRSGE 332 Query: 373 GIPRIDDVV 381 IP I DV+ Sbjct: 333 VIPFIMDVL 341 >UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GA45_PHATR Length = 864 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 76/325 (23%), Positives = 140/325 (43%), Gaps = 74/325 (22%) Query: 119 LWVQPKVDGVAVTLVYRDGKLNKAI-------SRGNGLKGEDWTQKVSLISAVPQT---- 167 + +PK+DG++++ Y + N + +RG+G +G+D T V + VP T Sbjct: 222 ILTEPKLDGLSLSCRYEQRQSNTTLYTFVWASTRGDGKQGQDVTHAVQQGNLVPLTLDWA 281 Query: 168 --VSGPLANS-----TLQGEIFLQREGHIQQQMGG-----INARAKVAGLMMRQDD-SDT 214 V+ P + + ++GEI L + Q + G NAR +G+++R++ +D Sbjct: 282 SLVADPESYTHPKVLEIRGEIVLPTT--VFQSLEGEGLAFANARNAASGILLRKESITDP 339 Query: 215 LNS------LGVFVW--AWPDGPQLMSDRLKE-LATAGFTLTQ----------------- 248 + S L + + A DG + +L+ L T GF + + Sbjct: 340 VASQALREKLCFYAYDVAGDDGFTVSGVQLRRVLPTLGFRVPEPVAVTRLRLNNTTAWNV 399 Query: 249 -------TYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAE--- 298 Y ++++ + + + ++ DG V + + E + R L GQ+ Sbjct: 400 NDIQALLKYHHSMQHHRQGKKTSQTYGDYDM----DGAVHKVS-ESDLRIIL-GQSNRAP 453 Query: 299 -WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE- 356 W +A K+ P+A V + I VG++G ++ VA L PV L V+R + + Q+ Sbjct: 454 RWAIAHKFAPLAAVTTLLDITVQVGRTGALTPVAILQPVELAGVVVRRATLHNFAHMQQV 513 Query: 357 ----WDIAPGDQILVSLAGQGIPRI 377 IA +LV AG IP++ Sbjct: 514 LGSTTTIAKESSVLVRRAGDVIPQV 538 >UniRef50_Q9EMK7 AMV199 n=1 Tax=Amsacta moorei entomopoxvirus 'L' RepID=Q9EMK7_AMEPV Length = 532 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 35/289 (12%) Query: 107 NALSLWMRERSD--LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLIS-A 163 N L W+ E L + K DG++V D K NK SRG+G G+D T ++ + + Sbjct: 96 NKLLSWINEYHTNILVLSAKADGISVLW---DIKNNKIYSRGDGKYGKDITHFINYFNFS 152 Query: 164 VPQTVSGPLANSTLQGEI-FLQREGHIQQQMGGINARAKVAGLMMRQD-DSDTLNSLGVF 221 + ++ N + I F++ E I + R VAG + R + D +T +L ++ Sbjct: 153 DDKNINN---NDIFKNNINFVRGELVIDKPEN----RNIVAGQINRNEIDKET--ALKIY 203 Query: 222 VWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK--------NADEVARVRNEWWKAELP 273 A+ +++ R+ +L LT+ R VK + ++++ + N + + EL Sbjct: 204 FVAY----EILEPRMTQLEQFH-KLTENSIRTVKYDSVDYNISYEQLSEIYNNYTQ-ELS 257 Query: 274 FVTDGVVVRAAK-EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVAS 332 + DG+++R P + G W + +K + VK I++ + K A Sbjct: 258 YYIDGIIIRNNNLNPVIK---SGNPPWSICFKETDKIYITTVKEIKWDISKKNIYIPKAI 314 Query: 333 LAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV 381 L P+++D+ + V + + + I G + + G IP I++V+ Sbjct: 315 LEPIIIDNSTINAVACHNAKYVIDKKINTGSIVEIVKKGGVIPIINNVI 363 >UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNLJ_DESAA Length = 631 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 116/508 (22%), Positives = 195/508 (38%), Gaps = 112/508 (22%) Query: 41 IKQWDDDY---WKEGKSEVEDGVYDQLSARLTQWQRCFG----------SEPRDVMMPPL 87 + QW + Y ++ GK + D YD L RL + G ++ R+V Sbjct: 17 LGQWLEKYNEAYRAGKPMISDAHYDLLVERLREIAPDHGFLSAVEAETFADKREVR---- 72 Query: 88 NGAVMHPVAHTGVRKMVDKNALSLWMRER----------SDLWVQ--PKVDGVAVTLVYR 135 HP K DK +L ++ ER +D+ Q PK+DG+A Sbjct: 73 -----HPAPMLSTEKAYDKQSLERFV-ERVYKEAAQIGVTDVLFQVTPKLDGLAAR---D 123 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 DG++ +RGNG G D T + +PQ G GEI + + + Q+ + Sbjct: 124 DGQI--LATRGNGYAGYDITNALEK-GVIPQGGRG-----LGLGEI-VAVQSYFQENLAD 174 Query: 196 --INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRA 253 + R V G++ SD LN Q + D+ TL + Sbjct: 175 RFEHPRNMVVGII----SSDVLNI---------SAKQALEDKQVHFVPYA-TLNKWEGSG 220 Query: 254 VKNADEVARVRNEWWKAELPFVTDGVV-------VRAAKEPESRHWLPGQAEWLVAWKYQ 306 + + ++ + +A + DG+V VR S H+ W +A K + Sbjct: 221 KELLENSEKITQDLIQA-TDYPMDGMVASVMNQDVRDHMGATSHHY-----RWQIAIKAK 274 Query: 307 PVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQIL 366 V V AI + VG++G ++ V + P+ L ++RV + R +E G I Sbjct: 275 GETGVTTVNAITWQVGRTGNVTPVLEVEPLKLSGATIRRVTAHNAGRIREKGAGVGASIE 334 Query: 367 VSLAGQGIPRIDDVVWRGAERTKP-------TPPENRFNSLTCYFASDVCQEQFISRLV- 418 V +G+ IP++++V+ + P TP E + L C + C+ + R+ Sbjct: 335 VIRSGEVIPKLENVLTPSDDTLIPENCPVCETPLEWNNDFLKCPNLN--CKARVEQRIRH 392 Query: 419 ---------WLGAKQVLGLDGIGEAGWRALHQTHRF-EHIFSWLLLTPEQLQNTPGIAKS 468 W G K V + + G+ +L + + E F L P Q +N Sbjct: 393 WFRILGNADWFGIKTV---ERLVAGGFDSLEKIYAMTEEDFLSLEFGPVQSKN------- 442 Query: 469 KSAQLWHQFNLARKQPFT--RWVMAMGI 494 L NL++ +P R++ A GI Sbjct: 443 ----LAEAINLSKSRPVEDWRFLAAFGI 466 >UniRef50_B3FJJ2 Putative DNA ligase n=1 Tax=Pseudomonas phage 201phi2-1 RepID=B3FJJ2_9CAUD Length = 308 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 14/130 (10%) Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS-- 175 D+ + P +G V LVY+ G L+KAI++G G+ G D+T L+ +PQ + L N Sbjct: 112 DIIMTPYYNGCRVELVYQGGSLHKAITKGGGIMGTDFTMNAYLVEGIPQQI---LDNERI 168 Query: 176 TLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFV---WAWPDGPQLM 232 +++G I + G R A LM + + LN L VFV W P G L Sbjct: 169 SIRGVI----TSTLNHVWGEDEKRVISASLMSTEPTNINLNYL-VFVPDDWHVP-GAMLN 222 Query: 233 SDRLKELATA 242 + L+ ++ A Sbjct: 223 TKDLRSISLA 232 >UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP Length = 768 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 2/117 (1%) Query: 268 WKAELPFVTDGVV--VRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSG 325 + L F DGVV V + + ++ + W VA KY Q+ + I+ VG++G Sbjct: 347 LRDSLAFDIDGVVYKVDSLALQQRLGFVTREPRWAVAHKYPAQEQMTRLLGIEIQVGRTG 406 Query: 326 KISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW 382 K++ VA L PV + V + + + D+ GD ++V AG IP++ VV Sbjct: 407 KLTPVARLEPVFVGGTTVSNATLHNEDEARRKDVRVGDTVIVRRAGDVIPQVVGVVL 463 >UniRef50_C0BKC6 DNA ligase (NAD(+)) n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BKC6_9BACT Length = 183 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 8/69 (11%) Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--------PLANS 175 K DG +++L Y +G L KAI+RG+GL+G++ T V I VP + P NS Sbjct: 115 KFDGASISLTYENGILIKAITRGDGLQGDNITTNVRTIKTVPLKLKSDFPKFFVNPWRNS 174 Query: 176 TLQGEIFLQ 184 T G + ++ Sbjct: 175 TALGGVSIK 183 >UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=DNLJ_VESOH Length = 632 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 53/217 (24%), Positives = 84/217 (38%), Gaps = 26/217 (11%) Query: 299 WLVAWKYQPVAQVAEVKAIQFA--VGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K + +VK + VG+SGKI+ VA + P +L + RV +E Sbjct: 281 WQIAFKENK--DIVQVKVLNVMPQVGRSGKITPVAEVEPTLLSGATIVRVTGHHYGLVKE 338 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYF----ASDV---- 408 + G + ++ +G IP+I V+ KP P + N L+C SD Sbjct: 339 QGLGIGSVVELTRSGLVIPKIISVL-------KPMPVDIPDNCLSCGMPLVWESDFLVCV 391 Query: 409 ----CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 C Q I R+ + K + DG G A L+ H + L E+L G Sbjct: 392 NHKNCPAQIIGRITYF-FKVLANNDGFGIATVEKLY-AHNIRSVSQIYTLNVERLM-AIG 448 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL 501 + S L Q + + + W + R L Sbjct: 449 FGEKTSINLISQLSRSISEKIEDWRFLAAFGMHRMGL 485 >UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepID=DNLJ_SHEB5 Length = 648 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 84/408 (20%), Positives = 154/408 (37%), Gaps = 79/408 (19%) Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL 177 ++ + PK+DG A + DG+ + +RG+G+KG+D ++ V + L Sbjct: 137 EIRITPKLDGYAA---FDDGE--RLYTRGDGVKGQDVSRAFERGLKVVRNSERGLG---- 187 Query: 178 QGEIFLQREGHIQQQMGGI--NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDR 235 GEI + + + ++++ N+R A ++ ++ + +R Sbjct: 188 AGEIVINK-AYFEKKLSQYFENSRNIQAAIIAEKN---------------------VDER 225 Query: 236 LKELATAGFTL----------TQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAK 285 + E G + T Y + + D + + W E + DGV++ A Sbjct: 226 VLEAIKEGACVFHPFAVLPNWTGNYQDLMTDFDGI--IEQVWNSVE--YDVDGVILEATD 281 Query: 286 EPESRHWLPGQA--EWLVAWKYQPVAQVAEVKAIQFA--VGKSGKISVVASLAPVMLDDK 341 H + W +A+K +VAEV+ I ++G+++ VA L P + Sbjct: 282 TRIKEHMGANRKFHRWQIAFKIND--EVAEVEVISVTPQTSRTGRVTPVAELVPTRISGA 339 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPEN------ 395 + RV + + + PG + + +G IP+I+ V+ KP P+ Sbjct: 340 MISRVTVHHYNMVKINGVGPGAIVQIVRSGLVIPKIEKVI-------KPVDPQMPELCPS 392 Query: 396 -------RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 + L C SD C Q + LV K + DG G L +HI Sbjct: 393 CKSHLLWESDHLVCPNKSD-CPAQTENTLVHF-FKTLANNDGFGPKNIEKLANL-GVKHI 449 Query: 449 FSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFT--RWVMAMGI 494 L P Q G + S L+ Q ++ R++ A G+ Sbjct: 450 HQMYDLKPHQFA-MYGFGEKTSKNLYDQLQASKNIEIEDWRFLSAFGV 496 >UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID=C4ZCZ5_EUBR3 Length = 656 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 93/464 (20%), Positives = 179/464 (38%), Gaps = 50/464 (10%) Query: 119 LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPL---A 173 +W+ K+DG+ + L Y G+L K ++RGNG G + T IS P+ + G + Sbjct: 100 IWLSWKLDGLTLVLTYDGGRLVKILTRGNGTVGSNITFLQDAISGFPKEIPYKGHMVVRG 159 Query: 174 NSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWP-----DG 228 +T+ F I+ +A + DD + + V +A+ D Sbjct: 160 EATISYTDFKLLNDTIEDDDEKYANPRNLASGTLNLDDVEEVKRRHVVFYAFTLVHIDDD 219 Query: 229 PQLMSDRLKELATAGFTLTQTYTRAVKNADEVAR--VRN-EWWKAELPFVTDGVVV---- 281 DR+ L+ F + + DE + R+ E + ++P DG+V+ Sbjct: 220 IISWGDRMSYLSDMKFNVVKREATDAAGLDEAVKRWTRDVESGRMDVP--VDGLVICYDD 277 Query: 282 --RAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 AA + H A+K+Q A ++ I+++ S IS VA PV ++ Sbjct: 278 TAYAAGGSVTGHHATRAG---FAFKWQDEAVDTRLRYIEWSCAVS-TISPVAVFEPVQIE 333 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPR---IDDVVWRGAERTKPTP---- 392 V R ++ ++ + + + V A + IP+ + D V E K P Sbjct: 334 GTTVSRASLCNLTEIERLGVGKECTLSVIKANKIIPKCIAVKDAVGE-VEIPKECPVCHH 392 Query: 393 PENRFNS-----LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIG-EAGWRALHQTHRFE 446 P F S T + + C + + + +K + +DG+ + + +++ F Sbjct: 393 PTRIFVSKNSGVKTLHCTNPDCTAKNVKKFSRFVSKSGMDIDGLSVQTMLKFINEG--FI 450 Query: 447 HIFSWLLLTPE---QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT-----R 498 F + PE ++ + G + + +R + A+ IPL + Sbjct: 451 KQFPDIYHLPEHFDKISSMEGFGEKSCMNMQTAIEKSRHVHPVNLIFALCIPLIGTDAGK 510 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 +NA ++ + + F + G G ++ ++EW N Q Sbjct: 511 KIVNAIGFDGFADRMRNATDFV-DIDGIGQEKSGSILEWYANPQ 553 >UniRef50_B2ZXT5 NAD-dependent DNA ligase n=1 Tax=Ralstonia phage RSL1 RepID=B2ZXT5_9CAUD Length = 625 Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 124/285 (43%), Gaps = 23/285 (8%) Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGED---WTQKVSLISAVPQTVSGPLANSTL 177 V K+DG ++ L YR G+ K I+RG+G G+D + + I +P + Sbjct: 99 VSHKLDGTSLQLAYRGGRPWKLITRGDGALGKDISFFLPHLVKIGMIPDHIKTDALVVVF 158 Query: 178 QGEIFLQREGHIQQQMGGI-NARAKVAGLMMRQDDSDTLNSLGVF---VWAWPDGPQLMS 233 + E + ++ G NAR G+ RQD L + + V+ G +M Sbjct: 159 RCEGIMPVAVFEKKWAGKYDNARQLANGVFNRQDMHPALADVHMVVLSVYGMKQGEGIMY 218 Query: 234 DRLKELATAGFTLTQTYTRAVK---NADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR 290 + + GF + TR +K +A+ + R+ N+ +A + + DG+++ + S Sbjct: 219 AKRQ-----GFHVVP--TRMLKGRLDAEVLTRLLNKEREASI-YEMDGLILVPSPRIMS- 269 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKIS---VVASLAPVMLDDKKVQRVN 347 + P + + + A+K+ AEV ++ V + ++ ++ P +D V V Sbjct: 270 YTSPDRPKDITAFKFNDEENAAEV-PVESVVWQKTRLHRWQPKITIKPTFMDGVMVTNVT 328 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP 392 + +E I PG + V +G IP+I VV +G + P P Sbjct: 329 AHNPAWMKERGIGPGAIVKVLRSGGVIPKIVGVVKKGKFQPPPGP 373 >UniRef50_A8JFJ7 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8JFJ7_CHLRE Length = 623 Score = 42.4 bits (98), Expect = 0.051, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 35/154 (22%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQ-RCFGSEPRDVMMP---PLNGA-- 90 L+ + + + Y+ + E+ D YD+L R R G DV P P+ A Sbjct: 4 LEAALTKHRELYFNQ-TPEISDAAYDELKRRFRDLAARLRGVAAEDVAFPVGAPVAAASA 62 Query: 91 ---VMHPVAHTGVRKMVDKNALSLWM-RERSDLW-------------VQPKVDGVAVTLV 133 V H V T + + + + WM R + L V+PKVDG+AV +V Sbjct: 63 LRKVKHTVPMTSLAAVNSRQEVEAWMGRTLARLAQLRQGAAGSWGWVVEPKVDGLAVRVV 122 Query: 134 YR-----------DGKLNKAISRGNGLKGEDWTQ 156 YR +L +A +RG+G GED T Sbjct: 123 YRRVAKGDGGGGAAYELQEAATRGDGEVGEDVTH 156 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI 633 e-180 UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN 623 e-177 UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNL... 621 e-176 UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolytic... 621 e-176 UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN 620 e-176 UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS 619 e-175 UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 617 e-175 UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_E... 616 e-175 UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH 615 e-174 UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=... 614 e-174 UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 612 e-174 UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DN... 611 e-173 UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 609 e-173 UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT 609 e-172 UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_T... 608 e-172 UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 Re... 605 e-171 UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LI... 604 e-171 UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriac... 602 e-170 UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defen... 602 e-170 UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum ... 602 e-170 UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9... 602 e-170 UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD 601 e-170 UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD 600 e-170 UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL 599 e-170 UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidan... 598 e-169 UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA 598 e-169 UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_H... 597 e-169 UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 596 e-169 UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A ... 596 e-169 UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD 595 e-168 UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DN... 594 e-168 UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB 594 e-168 UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV... 594 e-168 UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA 594 e-168 UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_A... 593 e-168 UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU 592 e-167 UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 ... 592 e-167 UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ... 590 e-167 UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XG... 589 e-166 UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowsto... 589 e-166 UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB 589 e-166 UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus Re... 586 e-166 UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Clo... 586 e-166 UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9... 585 e-165 UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID... 585 e-165 UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter pisco... 584 e-165 UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicu... 584 e-165 UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL 583 e-165 UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP 583 e-165 UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNL... 582 e-164 UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwini... 581 e-164 UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invi... 580 e-164 UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATC... 579 e-164 UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus ... 579 e-163 UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_L... 577 e-163 UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipe... 575 e-162 UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriac... 575 e-162 UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT 575 e-162 UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC ... 572 e-161 UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DN... 572 e-161 UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_E... 572 e-161 UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacte... 572 e-161 UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB 570 e-161 UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate divi... 570 e-161 UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 569 e-161 UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=D... 569 e-161 UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3... 568 e-160 UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetac... 568 e-160 UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachl... 567 e-160 UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 Re... 567 e-160 UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ... 567 e-160 UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI 566 e-160 UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH 566 e-160 UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL 564 e-159 UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM... 564 e-159 UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473... 564 e-159 UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW 562 e-158 UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNL... 562 e-158 UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium... 562 e-158 UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 561 e-158 UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV 561 e-158 UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans D... 560 e-158 UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO 557 e-157 UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 557 e-157 UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_L... 556 e-157 UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW 555 e-156 UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanoba... 555 e-156 UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 554 e-156 UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_H... 554 e-156 UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA 554 e-156 UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP 552 e-155 UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 549 e-155 UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella mu... 549 e-155 UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=... 549 e-154 UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA 549 e-154 UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 ... 547 e-154 UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexib... 547 e-154 UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIG... 547 e-154 UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT 547 e-154 UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata ... 544 e-153 UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID... 544 e-153 UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DN... 544 e-153 UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 543 e-153 UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacterace... 542 e-152 UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepI... 541 e-152 UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNL... 541 e-152 UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subs... 540 e-152 UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amo... 537 e-151 UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 537 e-151 UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ 535 e-150 UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepI... 535 e-150 UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP 534 e-150 UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=... 534 e-150 UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 534 e-150 UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN 533 e-150 UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LI... 532 e-149 UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE 531 e-149 UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 Rep... 531 e-149 UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=... 531 e-149 UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF 529 e-148 UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DN... 529 e-148 UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2... 528 e-148 UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 527 e-148 UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL 527 e-148 UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactoly... 525 e-147 UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM ... 525 e-147 UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE 524 e-147 UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_... 522 e-146 UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 42... 521 e-146 UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR 521 e-146 UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG 520 e-146 UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia... 520 e-146 UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 23... 520 e-146 UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 Re... 519 e-145 UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens... 516 e-144 UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=... 513 e-144 UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DN... 513 e-144 UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_A... 512 e-143 UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_... 512 e-143 UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA 512 e-143 UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_A... 511 e-143 UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN 511 e-143 UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM 510 e-143 UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNL... 510 e-143 UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia florid... 507 e-142 UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC ... 507 e-142 UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB 504 e-141 UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=D... 503 e-141 UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-... 502 e-140 UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT 500 e-140 UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus... 500 e-140 UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongi... 497 e-139 UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DN... 497 e-139 UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (... 496 e-139 UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia en... 496 e-139 UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 1436... 496 e-139 UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ... 496 e-139 UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 Re... 496 e-138 UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthos... 494 e-138 UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL 494 e-138 UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI 493 e-138 UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=... 492 e-137 UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 491 e-137 UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuri... 491 e-137 UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 206... 487 e-136 UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma h... 485 e-135 UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_S... 485 e-135 UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD 485 e-135 UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobact... 482 e-134 UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1... 482 e-134 UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobi... 481 e-134 UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 480 e-134 UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepI... 478 e-133 UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminoc... 477 e-133 UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_... 477 e-133 UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttle... 477 e-133 UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1B... 475 e-132 UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepI... 473 e-132 UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria... 471 e-131 UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminoc... 471 e-131 UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L... 467 e-130 UniRef50_B2PUQ1 Putative uncharacterized protein n=1 Tax=Provide... 467 e-130 UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_S... 465 e-129 UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepI... 464 e-129 UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 463 e-129 UniRef50_D2U3F9 NAD-dependent DNA ligase LigB n=1 Tax=Arsenophon... 463 e-129 UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=... 461 e-128 UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 Rep... 460 e-128 UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNL... 460 e-128 UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured orga... 458 e-127 UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE 454 e-126 UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bactero... 453 e-125 UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Provide... 452 e-125 UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostri... 451 e-125 UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 ... 447 e-124 UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli Re... 445 e-123 UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation do... 442 e-122 UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNL... 442 e-122 UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4... 441 e-122 UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3... 440 e-122 UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninog... 440 e-121 UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=... 436 e-120 UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin42... 436 e-120 UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocan... 435 e-120 UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepI... 435 e-120 UniRef50_D1P0P2 NAD-dependent DNA ligase adenylation domain prot... 434 e-120 UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 433 e-120 UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM 426 e-117 UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 20... 425 e-117 UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolic... 425 e-117 UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4... 423 e-116 UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetale... 423 e-116 UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyoste... 420 e-116 UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_... 420 e-116 UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATC... 419 e-115 UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subs... 416 e-114 UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas f... 415 e-114 UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 5... 413 e-113 UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNL... 412 e-113 UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCM... 412 e-113 UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ... 409 e-112 UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS 406 e-112 UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis p... 403 e-110 UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis... 399 e-109 UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 84... 398 e-109 UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ... 385 e-105 UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris ... 378 e-103 UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudo... 369 e-100 UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornu... 350 1e-94 UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acid... 316 1e-84 UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNL... 312 2e-83 UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp.... 308 5e-82 UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate ir... 300 7e-80 UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens ... 292 3e-77 UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 ... 290 9e-77 UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivi... 269 3e-70 UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Mori... 259 2e-67 UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Sipho... 252 2e-65 UniRef50_Q9EMK7 AMV199 n=1 Tax=Amsacta moorei entomopoxvirus 'L'... 222 3e-56 UniRef50_Q7R767 DNA ligase, NAD-dependent, putative (Fragment) n... 195 4e-48 Sequences not found previously or not previously below threshold: UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID... 399 e-109 UniRef50_A1SX61 DNA ligase n=6 Tax=Proteobacteria RepID=DNLJ_PSYIN 286 1e-75 UniRef50_A6DPT5 NAD-dependent DNA ligase n=1 Tax=Lentisphaera ar... 279 2e-73 UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepI... 267 7e-70 UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius ok... 254 5e-66 UniRef50_C1M1N3 DNA ligase, NAD-dependent, putative n=1 Tax=Schi... 231 6e-59 UniRef50_D1JM64 NAD-dependent DNA ligase n=1 Tax=Bacteroides sp.... 230 2e-58 UniRef50_Q197A8 Putative DNA ligase 052L n=1 Tax=Invertebrate ir... 217 7e-55 UniRef50_Q9YVT0 ORF MSV162 putative NAD+ dependent DNA ligase, s... 215 2e-54 UniRef50_B2ZXT5 NAD-dependent DNA ligase n=1 Tax=Ralstonia phage... 213 2e-53 >UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI Length = 675 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 133/580 (22%), Positives = 228/580 (39%), Gaps = 49/580 (8%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 +PA A + I+ L++QI++ D Y+ E+ D YD+L L ++ S Sbjct: 9 APADAAQRIAELREQIRRHDYCYYVLDAPEISDAEYDRLMRELLDLEQSHPELVTADSPS 68 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER-------SDLWVQPKVDGVAV 130 + V PL AV H V + VD L + R V+PK+DG+ V Sbjct: 69 QRVGGQPLAAFRAVSHRVPLLSLANAVDDQDLREFDRRARERADRPLTYVVEPKIDGLTV 128 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ 190 L Y +G+ +A +RG+GL GED T+ + + AVP + + + ++GE +L + + Sbjct: 129 VLSYEEGRFIRAATRGDGLIGEDITENIKTVRAVPLRLKRDIKSLEVRGEAYLPKAAFAR 188 Query: 191 QQMGGI--------NARAKVAGLMMRQDDSDTL-NSLGVFVWAW-----PDGPQLMSDRL 236 N R AG + + D T L + + DG + L Sbjct: 189 LNEEREEAGEAAFANPRNAAAGSLRQLDPKVTASRPLRAYFYNILHLEGADGVGEQVEAL 248 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHW 292 + L G + R + D+V W + +LP+ DG+VV+ + + Sbjct: 249 QMLEDLGLPVNPE-RRYCRTIDDVIDYCRYWTEHRHDLPYEIDGMVVKVNELDQYPLLGE 307 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 + +A+K+ P + V+ I VG++G I+ A L PV L V R + + Sbjct: 308 TAKSPRYAIAFKFPPEQAITRVRDITVKVGRTGVITPTAELEPVRLAGTTVSRATLHNED 367 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNSLTC-------- 402 +E DI GD +++ AG IP + V+ R E P+ + Sbjct: 368 IIRERDIHIGDYVVIQKAGDIIPEVLSVLKEKRTGEERPFFMPQTCPECHSPVSRLKGEA 427 Query: 403 --YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 S C Q L+ ++ + ++G+G A L + LT EQ+ Sbjct: 428 AIRCTSLACPAQAKEGLIHFASRDAMNIEGLGPAVVNLLWEAGLVRDPADLYDLTAEQVA 487 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE 517 + K +A L ++ + + A+GI L A A S QL+ +T Sbjct: 488 PLERMGKKSAANLIAAIENSKSRGLAALIFALGIRLVGQTAAKTLARHFGSMDQLMKATT 547 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + Q + G A + W +++ LA + + Sbjct: 548 EELQAVSEIGPKMAESLQRWFAVPANRQMIDRLAEKGLQM 587 >UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN Length = 669 Score = 623 bits (1608), Expect = e-177, Method: Composition-based stats. Identities = 114/582 (19%), Positives = 212/582 (36%), Gaps = 50/582 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVM 83 S Q+ I L+ + ++ Y V D YD+ L + + D Sbjct: 1 MSKEAVQQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLETENPEFITEDSP 60 Query: 84 MPPLNG-------AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGV 128 + G V H + ++ L + R + K+DG+ Sbjct: 61 SVRVGGAVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDGVNVRYICELKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 AV+L Y G+ + +RG+G+ GED TQ + I A+P + + ++GE ++ + Sbjct: 121 AVSLHYEKGRFIQGSTRGDGITGEDITQNLKTIKAIPLRLQEEVT-LEVRGEAYMPKRSF 179 Query: 189 IQQQMG--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQLMSDR 235 ++ N R AG + + D L +FV+ D S+ Sbjct: 180 VKLNEEKEQNGEAVFANPRNAAAGSLRQLDPKIAAKRNLSMFVYGLADIEGKTITSHSEA 239 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESRH 291 L L GF R + +EV EW + L + DG+V++ E Sbjct: 240 LDFLGELGFKTNPN-RRICETIEEVIAYVEEWQEKRPNLDYEIDGIVIKVDDVTLQERLG 298 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W +A+K+ V + I+ +VG++G ++ A L PV + V+R ++ + Sbjct: 299 TTAKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNE 358 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTPPENR---------FNS 399 +E DI GD ++V AG IP + +VV+ G E P Sbjct: 359 DLIREKDIRIGDYVVVKKAGDIIPEVVNVVFDKRTGKEEAYHMPTHCPTCDSGLVRLEEE 418 Query: 400 LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + + C Q L+ ++ + +DG+GE L + + LT +QL Sbjct: 419 VALRCINPACPAQIREGLIHFVSRNAMNIDGLGERVITQLFEANYIRTFADLYGLTKDQL 478 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFST 516 + ++ L +++ R + +GI A A + L+ + Sbjct: 479 LQLDRFGEKSASNLVQAIEASKENSLERLLFGLGIRHVGAKAARTLAEHFETMDNLVKAG 538 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 E+ + + G A+ ++ + +N + L + Sbjct: 539 EEELKAINEIGEKMAQSIVTYFDNEDVLHLIQQFKDYGVNMT 580 >UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNLJ_HAHCH Length = 683 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 121/585 (20%), Positives = 227/585 (38%), Gaps = 57/585 (9%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA QEE++ L++ I + Y+ + D YD+L RL + + F S + Sbjct: 5 PAAIQEELNTLRETINDHNYRYYTLDDPSIPDAEYDRLMRRLREIEAEFPQTITPDSPTQ 64 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-----------RSDLWVQPKVDG 127 V P G V H + + ++ L + R R D +PK+DG Sbjct: 65 RVGAAPAEGFETVSHRLPMLSLDNAFEEQDLLDFDRRVRERLKEAEDARIDYCCEPKLDG 124 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQR 185 +A++L+YRDG L + ++RG+G GED T V + +P + G A ++GEI+L + Sbjct: 125 IAISLLYRDGYLVRGVTRGDGSAGEDITANVKTVKNIPLKLRGEGYPAELEVRGEIYLPK 184 Query: 186 EGH--------IQQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG----PQLM 232 + + +N R AG + + D T L + ++ P Sbjct: 185 AAFDAINKDAAAKGEKTFVNPRNAAAGSLRQLDPRITAKRALEMCCYSVGYFEGELPGTQ 244 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAA--KEPE 288 D L +L G + + A E + +LP+ DGVV + + Sbjct: 245 HDILTQLQQWGLKINSQM-KLASGAQECLDYYRHIMSVRDQLPYEIDGVVFKVNRIDLQQ 303 Query: 289 SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 ++ W +A K+ ++ E+ A+ F VG++G ++ VA L PV + V + Sbjct: 304 ELGFVSRAPRWAIAHKFPAHEEMTELLAVDFQVGRTGAVTPVARLKPVFVGGVTVSNATL 363 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC------ 402 ++ + D+ GD +++ AG IP++ VV P + + C Sbjct: 364 HNMDEIRRLDVHIGDTVIIRRAGDVIPQVVSVVQDRRPENA-VPVDRPEHCPVCGSDVLQ 422 Query: 403 --------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 C Q + +++ + +DG+G+ L + + S L Sbjct: 423 LEGEAVARCSGGLYCSAQRKEAIKHFASRKAMDIDGLGDRLVELLVEKELIDSPASLYSL 482 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 + + + + L + +++ F R++ A+GI A + A + Sbjct: 483 KAPDVAGLERMGEKSAQNLINAIEASKQTTFARFIYALGIREVGEATAKVLAQHFPTLDL 542 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 L +TE+ + P G A + + + + L Q ++ Sbjct: 543 LKQATEEDLVEAPDIGPISAGHIRSFFQQEHNLETIDALLNQGVS 587 >UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=DNLJ_COPPD Length = 666 Score = 621 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 128/584 (21%), Positives = 238/584 (40%), Gaps = 51/584 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A++ I RL++ I+ + Y+ E+ D YD+L L ++ F S Sbjct: 1 MTREEAKKRIERLRELIEYHNYRYYVLDSPEISDEEYDKLYRELVTLEKQFPEFITPDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGV 128 + V PP V H V + ++ + + + + + + K+DG+ Sbjct: 61 TQRVGAPPAKEFATVTHEVPMLSLDNAFTEDEIKAFDQRVRSALNQQHVEYFCEHKLDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQRE 186 AV+L+Y +G + +RGNG GED T + I +P + G ++GE F+ Sbjct: 121 AVSLLYENGLFVRGSTRGNGYVGEDVTANLKTIKTIPLRLKGENIPPVVEIRGEAFMMLR 180 Query: 187 GH-----IQQQMG---GINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG------PQLM 232 +Q +G N R AG + + D S T ++ + G + Sbjct: 181 DFEALNEQRQALGQPLFANPRNAAAGSIRQLDSSITA-QRKLYFMPYGFGLVQGMDFETQ 239 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPE-- 288 LK+ GF + + + R + +E W + ELPF DGVV++ Sbjct: 240 ERFLKQCQEWGFRINE-HNRKASSIEEALEFIRYWTEHRVELPFPADGVVIKVNNLRYWD 298 Query: 289 SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 + +A+K+ + ++K + F VG++G I+ VA L PV+LD V R + Sbjct: 299 ILGTTAHAPRYAIAYKFPAEEKETKLKDVVFQVGRTGIITPVAMLEPVVLDGATVSRATL 358 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRF--------N 398 + ++ D+ GD + + AG IP I V R + + PP + Sbjct: 359 HNFDIVRQLDVRKGDVVKLKRAGMVIPEIIGVAAEKRTGKEEQIEPPTTCPVCGGPTEWD 418 Query: 399 SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 + C Q L+ ++ + +DG+GE+ L ++I L+ + Sbjct: 419 GAYLKCVNITCPAQLKGHLLHWASRDAMDIDGLGESIIENLVDMGLVKNIADLYKLSVQD 478 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 L P +A+ + +L+ ++ +PF R + +GIP A + A S + LL + Sbjct: 479 LLTLPRLAQRSATKLYENIQRSKDRPFFRVLYGLGIPRVGLKTAQMLAEHFGSINALLNA 538 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 T + G G+ A +++ ++ Q+ +L L + + Sbjct: 539 TMDELTSIEGIGTDTAETILKALQSPQVHELIDQLKTLGLKMEQ 582 >UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN Length = 693 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 131/583 (22%), Positives = 245/583 (42%), Gaps = 52/583 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 P EE+ RL+++I+ + Y+ + D YD+L RL + +R + S + Sbjct: 12 PKEVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQ 71 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGVAV 130 V L G V H V + ++ + + + + + K+DGV++ Sbjct: 72 RVGGKVLEGFKTVKHSVPMLSLDNTYNEEEIIEFDKRVKKTLQESEVEYVAELKIDGVSI 131 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ 190 L Y +G+ +RG+G++GED ++ V I +VP + PL ++GEI++ + + Sbjct: 132 ALRYENGRFVLGATRGDGVEGEDVSENVKTIRSVPLRLRKPLT-IEVRGEIYMPVDEFKR 190 Query: 191 QQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP----DGPQLMSDRLK 237 N R AG + + + + L F++ G + + L+ Sbjct: 191 LNEEREEEGLPPFANPRNAAAGTLRQLNTALVASRRLDSFIYYVVHPENYGLKTQWEALQ 250 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESR--HWL 293 L GF + ++R KN EV EW K EL + DGVVV+ + + Sbjct: 251 FLKEIGFKVNP-HSRLCKNIQEVIEYWREWKERKRELDYWVDGVVVKVNRFDFQKVLGET 309 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W +A+K+ + + VG++G ++ VA L PV L V+R ++ + Sbjct: 310 SKAPRWAIAFKFPAEQARTRILDVTIQVGRTGVLTPVAELEPVQLAGTIVKRASLHNFEY 369 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENR-----------FNSL 400 +E DI GD + V AG IP+I + R + PP++ + + Sbjct: 370 IREKDIRIGDYVFVEKAGGIIPQIVKSIPELRTGSEKEIKPPQSCPVCGGKVGKLSPDEV 429 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 + C + L +++ L ++G+GE L + + I LTP L Sbjct: 430 AIRCLNPHCPAKLKRALRTFVSREALDIEGLGEKIIDRLVDSGLVKDIADIFYLTPFDLA 489 Query: 461 NT-PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFST 516 PGI + A++ + A+K+P + + +GIP+ A + A +S + ++ Sbjct: 490 QLGPGIGQRTIAKILQEIEEAKKRPLHKLITGLGIPMVGQKTAKILAEHFKSLEAIAEAS 549 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + + +PG G AR ++E+ N + +++ L + E Sbjct: 550 YETLKDIPGIGPEIARSIVEYFRNPKTREIIEKLKKAGVKLEE 592 >UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS Length = 672 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 122/589 (20%), Positives = 220/589 (37%), Gaps = 55/589 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 A++ I L+ +I+ + Y++ E+ D YD L L ++ F S Sbjct: 2 MDAESARKNIEDLKARIEYHNRRYYQLDDPEISDAEYDSLLQELIALEKQFPQWLTEDSP 61 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMR---------ERSDLWVQPKVDG 127 R + PL+ +H + + + + R ER V+PK+DG Sbjct: 62 SRRIGAAPLSKFAPAVHLSPMLSLANAFSEEEILEFDRRLKRFLDSSERLSFVVEPKIDG 121 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIF 182 VAV L+Y G L +RG+G KGED TQ + + +P + ++GEI+ Sbjct: 122 VAVNLIYSSGVLTTGATRGDGAKGEDVTQNIRTLHTIPLKIQNGSDERLPEQIEIRGEIY 181 Query: 183 LQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWP----DGP 229 ++ + N R AG + + D S T L +F +A Sbjct: 182 METAAFRKLNERRLAAGEPPFANPRNAAAGSLRQLDASITARRPLKMFCYAVGIVRGRAF 241 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP 287 D L L GF++ + R V+ ++ E + ELP+ DG+V++ Sbjct: 242 TYHHDVLHALKKWGFSVNP-FIRQVEGIEKCIEFYRELQDLRNELPYEIDGMVIKVDDLS 300 Query: 288 ES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + W VA K+ ++ I VG++G ++ VA + PV + V R Sbjct: 301 LQTRLGAVSRSPRWAVACKFAATQATTVIRDIIVNVGRTGTLTPVALMTPVKVGGVTVSR 360 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV------WRGAERTKPTPPENRFNS 399 + + + DI GD +LV AG IP + V+ + T PE Sbjct: 361 ATLHNQDEIDKKDIRIGDTVLVQRAGDVIPEVVKVIVSNRSGREIPFKIPDTCPECGSEV 420 Query: 400 LT------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + C Q + ++ + ++G+G+ L Sbjct: 421 VRLAGEAAHRCIGLSCPAQLRRHIQHFVSRGGMDIEGLGDKLVSQLVNQKLIHDPADLYY 480 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRA---ALNASDERSWS 510 L+ + L N +A+ + L L++ + + A+GI + A R+ Sbjct: 481 LSHDALLNLERMAEKSVSNLLSAIELSKHPSLDKIIFALGIRHVGEHISKILARRFRTLD 540 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 L+ +TE + G + ++E+ NA +++ L ++ E Sbjct: 541 ALINTTENELLAIRDIGPEVSSSILEFFRNASNRRVIEKLKKAGVSPLE 589 >UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 Length = 667 Score = 617 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 127/577 (22%), Positives = 231/577 (40%), Gaps = 50/577 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPL 87 A ++ L + Q+ +Y+ E V D YD+L L + + E + V P + Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHP-EYKTVDSPTV 60 Query: 88 N---------GAVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTL 132 V H + +++ L + + + + K+DG+AV+L Sbjct: 61 RVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGNVEYMCELKIDGLAVSL 120 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 Y DG + ++RG+G GED T+ + I A+P + PL N ++GE ++ R ++ Sbjct: 121 KYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPL-NVEVRGEAYMPRRSFLRLN 179 Query: 193 MG--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQL----MSDRLKEL 239 N R AG + + D T L VF+++ D S+ L EL Sbjct: 180 EEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNARSQSEALDEL 239 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPG 295 GFT + R V N D V +W + LP+ DG+V++ + + Sbjct: 240 DKLGFTTNKNRAR-VNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQK 298 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A+K+ V ++ I+ ++G++G ++ A L PV + V R ++ + Sbjct: 299 SPRWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHNEDLIH 358 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TKPTPPENRFNSLTCY------- 403 + DI GD ++V AG IP + + PT + + L Sbjct: 359 DRDIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEGEVALR 418 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 + CQ Q + L+ ++Q + +DG+G + L+Q+ + + LT E L Sbjct: 419 CINPKCQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEEDLLPLD 478 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFW 520 + + K L A+ + +GI + + A + +LL TE Sbjct: 479 RMGQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAEL 538 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 ++ G A+ V+ + EN I+ L L + + Sbjct: 539 VEIHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNM 575 >UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_ERWCT Length = 563 Score = 616 bits (1589), Expect = e-175, Method: Composition-based stats. Identities = 252/540 (46%), Positives = 358/540 (66%), Gaps = 1/540 (0%) Query: 17 SVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 +V AVCP W RA +EI L+QQ++QWDD Y+ EGKS +ED VYDQL +L QW +CF Sbjct: 22 AVAAVCPDWDNTRASKEIDALRQQLEQWDDVYYTEGKSPIEDDVYDQLREQLNQWSQCFQ 81 Query: 77 SEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRD 136 + P NG HPVAHTG++K+ D+ L W+ +R DLWVQPKVDGVAVTLVY+ Sbjct: 82 PQNVIPARLPDNGKQPHPVAHTGLKKLSDRVQLVQWIVQREDLWVQPKVDGVAVTLVYQH 141 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI 196 GKL A+SRGNGL+GEDWT+K LI +P +SG ++ LQGE+FL+ H Q GG+ Sbjct: 142 GKLVSAVSRGNGLQGEDWTEKARLIPDIPHLLSGAPSSFVLQGELFLKMTDHRQYAQGGV 201 Query: 197 NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKN 256 NAR+ VAG M R S L+ +G+FVW WPDGP+ M +RL +L GF +T YT A+++ Sbjct: 202 NARSIVAGEMRRHQPSPVLSQIGLFVWEWPDGPKAMPERLDKLKEMGFAMTADYTHAIES 261 Query: 257 ADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKA 316 +V + R+ W+ + LPFVTDGVV+R KEP+ R+W A+W +AWKY PV QVAEV Sbjct: 262 FADVEKWRDHWYHSPLPFVTDGVVIRQTKEPQGRYWRNTSADWAIAWKYPPVHQVAEVVD 321 Query: 317 IQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPR 376 + F+VG++GK++VV ++P+ LDDK V RVN+GS+ RW++WD+ PGD++ VSLAGQGIPR Sbjct: 322 VAFSVGRTGKVAVVLKISPLKLDDKSVSRVNVGSLSRWKQWDVLPGDRVSVSLAGQGIPR 381 Query: 377 IDDVVWRGAERT-KPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG 435 +D+VVWRG ER +P E+ F++ +C+ S VCQ+QF++RLVWL + L L G+ + Sbjct: 382 LDNVVWRGTERPVIVSPDEHNFHAFSCFRYSVVCQQQFLARLVWLSGEHGLNLAGMRDGM 441 Query: 436 WRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 W L Q + SWL LT QL G+ ++ ++ AR++ + W++A+GIP Sbjct: 442 WLRLMQHDLLGDVLSWLYLTEAQLNAVNGMGDKRARDIYMSLQSARQKSLSHWLLALGIP 501 Query: 496 LTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + R+A++A + +W L T Q W+Q G G RA +++ + + + +L + L + I Sbjct: 502 VPRSAISALNNVNWLALQQRTAQQWRQFSGIGERRAEEIMAFLNHPIVMELIARLDLEGI 561 >UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH Length = 663 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 128/577 (22%), Positives = 225/577 (38%), Gaps = 50/577 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 ++ I L++ + Y+ E E+ D YD+L L + ++ S + + Sbjct: 2 DIEKRILELREILNYHSHKYYVEDAPEISDFEYDELYRELEKLEQERPDLITPDSPTQRI 61 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVAVTLV 133 PL G V+H V + + + L + R + V+ K+DG++V+LV Sbjct: 62 GGKPLEGFKKVVHAVQMQSLSDVFSREELLAFDRRVREAVGDDVEYVVEKKIDGLSVSLV 121 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM 193 Y +G + +RG+GL GED TQ + I +P + L ++GE+F+ ++ I+ Sbjct: 122 YENGVFTRGATRGDGLVGEDVTQNLKTIRTIPLRLKRDLPLLEVRGEVFISKKDFIKINE 181 Query: 194 G--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW----PDGPQLMSDRLKELA 240 N R AG + + D T L +FV+ + S+ L+ L Sbjct: 182 EQEAAGQQLFANPRNAAAGSLRQLDPKVTSQRKLDIFVFNIQRIEGQSFKTHSETLEFLK 241 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEPES--RHWLPGQ 296 GF + Y + K+ + V N + E+ F DG VV+ + Sbjct: 242 ELGFKTSPGY-KVCKDINAVWEEINRIGEERGEIDFEIDGAVVKVNSLEQREILGSTIKA 300 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W VA+KY + VK I VG++G ++ +A PV L V R + ++ +E Sbjct: 301 PRWAVAYKYPAEVKETVVKKITVNVGRTGVLTPIAIFDPVRLAGSTVSRATLHNMDYIKE 360 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRG-----AERTKPTPPENRFNSLTC-------YF 404 DI GD + + AG IP + DVV+ AE P + Sbjct: 361 KDIRIGDTVRIRKAGDIIPEVVDVVFEKRSGNEAEFNMPEQCPVCGADVVREEGEAAYRC 420 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ--LQNT 462 C Q ++V ++ + ++G+G A L + + I L E+ L N Sbjct: 421 TGIECSAQLYRKIVHFASRDAMNIEGLGPAIIEVLLEKGLIKEIADLYYLHKEKETLVNI 480 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 + K L +++ R + GI A L + + S L+ ++ + Sbjct: 481 ERMGKKSVENLLASIEKSKQNNIDRLIFGFGIRHIGLRAAQLLSENFESLDALMNASAED 540 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 +P G A+ V ++ Q + L A + Sbjct: 541 IMAIPEFGEKMAKSVEQFFRQKQNRDTVEKLKAAGVN 577 >UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=LIGB_KLEP7 Length = 564 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 298/551 (54%), Positives = 396/551 (71%), Gaps = 1/551 (0%) Query: 9 IGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARL 68 + + + +S A CP W AR ++E SRL QQI W + YW++G S V D VYDQL+ RL Sbjct: 14 LALGMFSASALATCPDWPLARGRQETSRLHQQIVAWKEAYWRQGASGVSDDVYDQLTLRL 73 Query: 69 TQWQRCF-GSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDG 127 QW++CF G+ P D +PP G HPVAHTGVRK+ D+++++ WM+ +SDLW+QPKVDG Sbjct: 74 AQWRQCFPGATPEDDDLPPPTGDARHPVAHTGVRKLADEDSVARWMKNKSDLWIQPKVDG 133 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 VAVTLVYR G+L +AISRG+GL+GE WT + I A+ + ++G LA+S LQGE+FL+R+G Sbjct: 134 VAVTLVYRQGRLVQAISRGDGLRGEAWTARARQIPALAKVMTGELADSVLQGELFLRRDG 193 Query: 188 HIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLT 247 H+QQQ GG+NARAKVAGLMMR D + L+ L VF+WAWPDGP M R + LA AGF + Sbjct: 194 HVQQQTGGMNARAKVAGLMMRADAAAALSQLDVFIWAWPDGPSDMRRRQQLLAQAGFKYS 253 Query: 248 QTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQP 307 YT V ++VA+ R W+++ LPFV+DGV+VR +EP R W PG+ EWL AWKY P Sbjct: 254 GQYTHPVSRIEQVAQWRQRWYRSPLPFVSDGVIVREGREPPGRVWSPGKGEWLAAWKYPP 313 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 ++V +V+AI+F++G+SG+++VVA L P LDDK+VQRVN+GSV RWQ DI GDQ+ + Sbjct: 314 ASRVMQVRAIRFSIGRSGRLNVVAELEPQRLDDKRVQRVNVGSVSRWQMLDIGVGDQLQI 373 Query: 368 SLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLG 427 SLAGQGIPR+D VVWR AER KPTPP +FN+LTCYFA+ C EQF+SRL+WL +K L Sbjct: 374 SLAGQGIPRVDAVVWRTAERHKPTPPPAKFNALTCYFATPECSEQFLSRLIWLSSKSALN 433 Query: 428 LDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTR 487 +DG+GE WR + Q + HIFSWL LT EQLQ PGI+ ++ LWHQF+L RK+PF R Sbjct: 434 VDGVGENLWRVIQQQNPMTHIFSWLALTVEQLQAVPGISAARGQHLWHQFDLVRKRPFIR 493 Query: 488 WVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLG 547 WV+AMGIP+ + AL + +W L +E W+ LPG G RARQ++ + + + L Sbjct: 494 WVLAMGIPVPQGALAQLESENWHLLAAKSEAQWRTLPGVGEIRARQLVAFLHHPDVVALA 553 Query: 548 SWLAAQQITGF 558 WL+ Q+I GF Sbjct: 554 QWLSGQRIPGF 564 >UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 Length = 677 Score = 612 bits (1580), Expect = e-174, Method: Composition-based stats. Identities = 117/583 (20%), Positives = 226/583 (38%), Gaps = 56/583 (9%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA+ Q+ I RL+Q+I + Y+ + + D VYD+L L + ++ + S + Sbjct: 7 PAKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQ 66 Query: 81 DVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERS---------DLWVQPKVDGVA 129 V PL V H + + + D+ L + + + +PK+DGVA Sbjct: 67 RVGAEPLKVFEPVHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPKMDGVA 126 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREG 187 ++L+Y +G+L +A +RG+G GE+ TQ I++VP + G ++GE+ + REG Sbjct: 127 LSLLYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVLMPREG 186 Query: 188 HIQQQ--------MGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWP-------DGPQLM 232 + N R +G + + D T + + + D P+ Sbjct: 187 FAKFNREAEKRGDKTFANPRNAASGSLRQLDPRITAK-RPLIFYGYLIGLLKGKDFPKNH 245 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES- 289 D LK G + + V + + ++PF DG+V++ Sbjct: 246 CDVLKWFKDWGIPVISE-IKVVGGIEGCLDYYEHLVKTREKMPFDIDGIVIKVNSLQVQA 304 Query: 290 -RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 ++ W +A+K+ ++ VKAI+F VG++G ++ VA L PV + V + Sbjct: 305 ELGFVSRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGAVTPVARLEPVSVSGVTVSNATL 364 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW----------RGAERTKPTPPE---N 395 + D+ GD ++V AG IP + + + R E Sbjct: 365 HNFDELYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRPKKAKLIKIPSRCPVCHAEVIKP 424 Query: 396 RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 ++ C+ Q + +++ L ++G+G+ Q + I L Sbjct: 425 EGEAVARCVGGLYCRAQLRESIKHFASRRALDIEGLGDKLVELFIQEKLIKDITGIYQLK 484 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 + P + + + L ++K R++ A+GI A A L Sbjct: 485 KSAITALPRMGEKSAENLLTAIEKSKKTTLPRFLYALGIRGVGDTTARTLARHFHELDLL 544 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + ++ + Q++ G A + + +L + L + Sbjct: 545 MKASIETLQEIRDIGPVAAENIHAFFHQKHNAELINKLIHLGV 587 >UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DNLJ_CITK8 Length = 671 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 124/588 (21%), Positives = 229/588 (38%), Gaps = 58/588 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 +++++ L+ ++ + Y E+ D YD+L L + + S + Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQHPDLITPDSPSQR 61 Query: 82 VMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVDGVAV 130 V PL + H V + + D+ + + + D + K+DG+AV Sbjct: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSGDKLTWCCELKLDGLAV 121 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGH 188 +++Y +G L A +RG+G GED T V I A+P + G A ++GE+FL + G Sbjct: 122 SILYENGVLISAATRGDGTTGEDITSNVRTIRAIPLKLRGDNIPARLEVRGEVFLPQAGF 181 Query: 189 IQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DGPQLMSD 234 + N R AG + + D T L F + + P Sbjct: 182 EKINEEARRTGNKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHLG 241 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAK--EPESR 290 RL + G ++ T + + V + E + L F DGVV++ E Sbjct: 242 RLLQFKAWGLPVSDRVT-LCDSPEAVLDFYHKVEEDRPTLGFDIDGVVIKVNSMALQEQL 300 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 ++ W VA+K+ Q+ V+ ++F VG++G I+ VA L PV + V + + Sbjct: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP-ENRFNSLTC------- 402 + + GD++++ AG IP++ +VV +ER + T P E + C Sbjct: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL--SERPEETRPVEFPTHCPVCGSDVERV 418 Query: 403 -------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 +C Q L +++ + +DG+G+ L + LT Sbjct: 419 EGEAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFRLT 478 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQL 512 +L + + + + A++ F R++ A+GI A A+ + L Sbjct: 479 AGKLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEAL 538 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 ++ Q++P G A V + + + L A+ I P Sbjct: 539 EAASIDELQKVPDVGIVVATHVFNFFAEESNRDVIGQLLAEGIHWPAP 586 >UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 Length = 677 Score = 609 bits (1571), Expect = e-173, Method: Composition-based stats. Identities = 113/579 (19%), Positives = 237/579 (40%), Gaps = 49/579 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 ++EI++L + I ++ Y+ + E+ D YD+L L + S Sbjct: 1 MQKVSVKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMR-------ERSDLWVQPKVDGVA 129 V PL+ ++H + + L + + E + V+ K+DG++ Sbjct: 61 TNRVGGKPLDKFNQIVHKTPMLSLSNAFSEQDLRDFDKRVQEYVGENVEYVVEFKIDGLS 120 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 V L Y +G+ K +RG+G+ GED +Q + + ++P ++ ++GE+++ ++ Sbjct: 121 VGLTYNNGEFEKGATRGDGVVGEDISQNLMTVKSIPLKINDK-KELIVRGEVYISKDNFR 179 Query: 190 QQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRL 236 + N R AG + + D T L +FV+ + + S+ L Sbjct: 180 KVNEQQEEQEQPLFANPRNLAAGSLRQLDPKLTAKRPLDIFVFNMENIEEYDLESHSESL 239 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESRHW 292 + L GF+++Q+Y + K+ DEV W + L + DG+V++ + + + Sbjct: 240 EYLEKLGFSVSQSY-KVCKSIDEVIEHIEYWTDNRGNLDYEIDGMVIKVNNIKQRDEMGY 298 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W +A+K+ + ++ I VG++G I+ A L PV L V R + + Sbjct: 299 TAKSPRWAIAYKFPAEKKKTKIVDIIVEVGRTGTITPSAILEPVRLAGTTVSRATLHNED 358 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----------L 400 +E DI D +LV AG IP++ +V+ R + PE Sbjct: 359 YIREKDIKINDTVLVQKAGDIIPQVLEVIKEERTGDEIDFKMPEKCPVCSEPTIRLEGEA 418 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 + C Q ++ ++ + +DG+GE+ L + + + E + Sbjct: 419 AVKCINMSCPAQIRRGIIHFVSRDAMNIDGLGESIITLLLNEKIIQDVSDLYYIKKEDVV 478 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE 517 + + + + L + +++ R + +GI A + A + + +++ +T Sbjct: 479 DLERMGEKSADNLINSIEKSKENDLWRLINGLGIKFIGVKAAKILAYNFKDLDEVISATS 538 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 + ++L GS A V+E+ + + + + L + Sbjct: 539 EQLEELEEFGSIMANSVVEFFKEDKNMNVINKLKNVGVN 577 >UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT Length = 678 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 125/581 (21%), Positives = 229/581 (39%), Gaps = 52/581 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM 84 + +I L +I D Y+ + E+ D YD L L + + E + V Sbjct: 1 MGKEDIKLQIDNLIDKINYHSDKYYNQDTPEISDFEYDMLMKELIKLEAE-NPEFKRVDS 59 Query: 85 PP---------LNGAVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGV 128 P V H + L + R + V+ K+DG+ Sbjct: 60 PSNRVGGMALDKFDQVTHKNPMLSLSNAYSAEDLRDFDRRVREMTDGDVEYVVEFKIDGL 119 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 +V + Y +G+ A +RGNG+ GED ++ V I ++P + ++GE+++ +E Sbjct: 120 SVGITYENGEFKSAATRGNGIIGEDISKNVMTIKSIPLKIDDK-REIIVRGEVYISKENF 178 Query: 189 IQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DGPQLMSD 234 + N R AG + + D T L +FV+ DG SD Sbjct: 179 EKVNEYQEEHDLQIFANPRNLAAGSLRQLDSKLTAKRPLDIFVFNLENINELDGIDTHSD 238 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--R 290 L+ L GF++++ Y + K+ DEV W + L F DG+VV+ + Sbjct: 239 SLEYLKKLGFSVSENY-KICKSIDEVIEFIEYWTENRGSLKFDIDGMVVKVNNIEQRNEM 297 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 + W +A+K+ + +++ I+ VG++G I+ A L PV L V R + + Sbjct: 298 GFTAKSPRWAIAYKFPAERKKSKILDIEVEVGRTGTITPTAILEPVRLAGTSVSRATLHN 357 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTP---PENRFNSLT--- 401 +E DI D ++V AG IP+I +VV G E+ P PE ++ Sbjct: 358 EDFIREKDIKLFDHVIVQKAGDIIPQIVEVVKEDRTGDEKDFVMPSVCPECGEPTVRLEG 417 Query: 402 ---CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 + C Q ++ +++ + +DG+GE+ + + + L EQ Sbjct: 418 EAAVKCINISCPAQIRRGMIHFVSREAMDIDGMGESIITLFLKEGLIKDVSDIYYLKKEQ 477 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQLLFS 515 + + + + L ++ R + +GI A + AS+ S +++ + Sbjct: 478 IVPLERMGEKSADNLIKAIEKSKSNDLWRLINGLGIRFVGVKGAKILASNFSSLDEIINA 537 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 + QQL GS + V+++ Q + L + Sbjct: 538 DVERLQQLEEFGSIMSESVVKFFREEQNLAVIQKLKDAGVN 578 >UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_THEAS Length = 673 Score = 608 bits (1569), Expect = e-172, Method: Composition-based stats. Identities = 131/582 (22%), Positives = 238/582 (40%), Gaps = 49/582 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A+ + L + I+ D Y++E E+ D YD L L +R F S Sbjct: 1 MDRSAARSRMEELAELIRHHDRLYYQENSPEITDQEYDALFRELVDLERSFPDLRLPDSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVA 129 V P + H + V + +S ++R D + +PK+DG+A Sbjct: 61 TLRVSGSPSEAFKRLPHSEPMLSLDNAVSREEVSDFLRRLYDALGGSAPVVCEPKLDGLA 120 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 V+L+YR G L + ++RG+G GED T V I +P+ + + ++GE+++ R Sbjct: 121 VSLLYRGGVLIRGLTRGDGSVGEDVTSNVMTIRDLPKRIDY-MGELEVRGEVYMSRRDFA 179 Query: 190 -----QQQMG---GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRL 236 +++ G N R AG + + D T +L F++ + G + + L Sbjct: 180 ALNQRREEEGLPPFANPRNAAAGSLRQLDPRVTAQRNLSCFLYHVVNHREVGLKTQEELL 239 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE--PESRHW 292 L F + + + R ++ +EV ++W + P TDGVV++ E Sbjct: 240 LWLKGRSFPVQEDF-RLCRDPEEVLEYLDDWDRRRHSYPADTDGVVIKLDSLEGREVLGS 298 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W VA+K+ P + V +I+ +VG++G ++ A L PV L +V+R ++ + Sbjct: 299 TNRSPRWAVAFKFPPEERPTRVLSIEVSVGRTGVVTPTAVLEPVRLSGTEVRRASLHNFD 358 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----------L 400 D+ GD + V AG+ IP + V R PPE + + Sbjct: 359 ELARKDVRVGDTVWVRKAGEIIPEVIRVDLGLRPEGTAPFVPPEGCPSCGSRLVRLPGEV 418 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 + C Q R++ ++ + + G+GE L + + LT E Sbjct: 419 AIRCINPSCPAQMKERIIHFASRDGMDVRGLGEKVASQLVDRGMVKDLADLFFLTMEDWL 478 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE 517 + + + ++ L ++AR +P + + A+GIP A A L+ ++E Sbjct: 479 SLDRMGERSASNLVRALDVARDRPLRKLIYALGIPGVGERTAQDLADRFGRLEALMDASE 538 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + + G G AR V ++ N +L L + E Sbjct: 539 EELASVEGVGPVVARSVRDFFRNDSTVRLVRRLRDAGVRMEE 580 >UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S0P4_SEROD Length = 567 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 259/560 (46%), Positives = 365/560 (65%), Gaps = 4/560 (0%) Query: 1 MKVWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV 60 ++V M +L G++ + CPAW P R Q EI+ L+ Q+++WD Y+++G S +ED V Sbjct: 6 IRVGMTLLGGLMFCGALRAESCPAWRPERLQLEITALKNQLERWDVAYYQQGDSLIEDQV 65 Query: 61 YDQLSARLTQWQRCFGSEPRDVMMPPL-NGAVMHPVAHTGVRKMVDKNALSLWMRERSDL 119 YD L +L W RC G E + L G HPVAHTG+ K+ D A+ W+R RSD+ Sbjct: 66 YDSLRQKLQLWHRCAGLERVEEPSSLLPAGKTPHPVAHTGLHKLADPAAVDQWLRGRSDV 125 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQG 179 WVQPKVDGVA+TLVYRDG+L A+SRGNGL+GE+W +KV I A+P V A LQG Sbjct: 126 WVQPKVDGVAITLVYRDGELAAAVSRGNGLQGENWLEKVRAIPAIPAAVKDAPATLILQG 185 Query: 180 EIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKEL 239 E+FL GH Q+ GGINAR+ VAG +M+ S L +G+FVWAWPDGP+ M+ RL++L Sbjct: 186 ELFLMVNGHQQKIHGGINARSTVAGALMKNRLSPVLQQIGLFVWAWPDGPKEMTQRLQQL 245 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEW 299 A GF L Y++ V + D+V + R W++ LPFVTDGVV+ A+ P+ R+W +W Sbjct: 246 AAMGFPLALAYSQPVSSLDDVRQWRERWYREALPFVTDGVVIHQARSPQGRYWQAKPGDW 305 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 VAWKY PV QVA V ++F+VG++GKI+VV L P+ +DDK V RVN+GS+ RW++W + Sbjct: 306 AVAWKYPPVQQVARVNDVEFSVGRTGKIAVVLKLDPLRMDDKWVSRVNLGSLPRWRQWAV 365 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERTKPT-PPENRFNSLTCYFASDVCQEQFISRLV 418 PGDQ+ +SL G GIPR+D V WR ER +P+ P +R+++L+C+ C++QF++RLV Sbjct: 366 VPGDQVAISLMGNGIPRLDKVAWRTTERIEPSAPAADRYHALSCFTWLPECRQQFLARLV 425 Query: 419 WLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFN 478 WLG Q LGL G+ E+ W+ L H+ WL+LTPEQL + PGI + + QF Sbjct: 426 WLGGPQGLGLHGVSESTWQVLIDQGLVRHLLDWLVLTPEQLMSAPGIGDKRGRSIHRQFQ 485 Query: 479 LARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWK 538 LAR+QPF RW++A+G+PL+ A +SW Q+ W+++ G G+ +A Q+ + Sbjct: 486 LARQQPFARWLIALGVPLSLQQTQA--LKSWHQIRQLPVGEWRKMTGIGAKKAEQITGFL 543 Query: 539 ENAQIKKLGSWLAAQQITGF 558 ++ L S L AQ+ITGF Sbjct: 544 QHPPFLTLVSTLEAQEITGF 563 >UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LIGB_PECCP Length = 562 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 245/553 (44%), Positives = 361/553 (65%), Gaps = 1/553 (0%) Query: 4 WMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQ 63 ++ I++G + S+V VCP W R+++EI L+QQ++QWDD Y+ EGKS V D VYDQ Sbjct: 8 FLIIIVGGISGFSAVAGVCPDWDNTRSKKEIDALRQQLEQWDDVYYTEGKSPVADDVYDQ 67 Query: 64 LSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQP 123 L +L QW CF + + P +G +HPVAHTG++K+ D+ L W+ +R D+W+QP Sbjct: 68 LREQLNQWLGCFQPQSVASVRLPDHGKQLHPVAHTGLKKLSDREQLVQWIAQREDVWIQP 127 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DGVAVTLVY+ GKL A+SRGNGL+GEDWT+KV LI +P ++ + LQGE+FL Sbjct: 128 KIDGVAVTLVYQHGKLESAVSRGNGLQGEDWTEKVRLIPEIPHLLTNVPSLLVLQGELFL 187 Query: 184 QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAG 243 + H Q GG+NAR+ VAG M R S L+ +G+F+W WPDGP+ M +RL++L G Sbjct: 188 KMTDHRQHIQGGVNARSVVAGEMRRHQPSPVLSQIGLFIWEWPDGPKTMPERLEKLTEMG 247 Query: 244 FTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAW 303 F +T YT A+ + + + + W+ LPFVTDGVV+R KEP+ R+W A+W +AW Sbjct: 248 FAMTADYTHAIGSFADAEKWHHYWYHNPLPFVTDGVVLRQTKEPQGRYWRNTSADWAIAW 307 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 KY P QVAEV + F+VG++GK++VV L + LDDK V RVN+GS+ RW++WD+ PGD Sbjct: 308 KYPPFHQVAEVIDVVFSVGRTGKLAVVLKLNLLKLDDKSVSRVNVGSLSRWKQWDVLPGD 367 Query: 364 QILVSLAGQGIPRIDDVVWRGAER-TKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGA 422 ++ VSLAGQGIPR+D+VVWR ER +P E+ F++ +C+ S VCQ+QF++RLVWL Sbjct: 368 RVSVSLAGQGIPRLDNVVWRSTERLPIVSPSEHDFHAFSCFRYSTVCQQQFLARLVWLSG 427 Query: 423 KQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARK 482 + L L G+ + W L Q E + SWL LT QL G+ ++ ++ AR+ Sbjct: 428 EHGLNLTGVRDGMWLRLMQHGLLEDVLSWLSLTEAQLNAVTGMGDKRARDIYKSLQSARQ 487 Query: 483 QPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 P +RW++A+G+P+ R+A++A + +W L T Q W+Q G G RA +++ + ++ Sbjct: 488 MPLSRWLLALGLPVPRSAISALNHVNWLALQQWTAQQWRQFSGIGERRAEEIMAFLKHPA 547 Query: 543 IKKLGSWLAAQQI 555 + + + L A+ I Sbjct: 548 VVEFIARLDAEGI 560 >UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriaceae RepID=C7N3E3_SLAHD Length = 708 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 126/609 (20%), Positives = 233/609 (38%), Gaps = 67/609 (11%) Query: 15 QSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC 74 S A A + + + I L+++I+ Y+ + E+ D +D L L + + Sbjct: 4 TSLFDADESAATVSDVKARIDALRKEIEHHTYLYYAKDAPEISDAAFDSLMRELRELELA 63 Query: 75 FG------SEPRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSD-------L 119 S + V V H V + + + L W+ + Sbjct: 64 NPQYIDPTSPTQRVGGYVGEQFSPVRHAVRMYSLDNAMGLDELDEWLARTLEAIGHPVQF 123 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-------- 171 + K+DG ++ L Y G L KA +RG+G GED T + + +P + Sbjct: 124 CCELKIDGSSIALTYEAGVLTKAATRGDGTTGEDVTVNMRTVRDIPLRLRDDGMAGLRDS 183 Query: 172 LANSTLQGEIFLQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFV 222 A+ ++GE+++ + + G N R AG + ++D T N L F+ Sbjct: 184 DASIEVRGEVYMPKSSFEKLNAAAEATGKQGFANPRNAAAGSLRQKDPKITQNRDLATFL 243 Query: 223 WAWPDGP----QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVT 276 +A D + +D L+ L GF + + EV + + LP+ Sbjct: 244 YAIADDAPIRAESQNDLLEWLRDCGFHVNPD-VKLCDTPQEVHDFCEQVAEKRDSLPYGI 302 Query: 277 DGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DGVVV+ R + W +A+K+ P + + I VG++G + VA L Sbjct: 303 DGVVVKVNDFATQRDMGFTARAPRWAIAYKFPPEEKTTVMHDITVQVGRTGACTPVAELD 362 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDD-VVWRGAERTKP--- 390 PV++D V R + ++ + D+ GD ++V AG IP I V+ E KP Sbjct: 363 PVLVDGSTVARATLHNLDEVRRKDVRIGDTVIVRKAGDVIPEILGPVLSLRPEGAKPWEM 422 Query: 391 --------TPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 +P S C Q + RL+ ++ + +DG+G+ L ++ Sbjct: 423 PATCPSCGSPLVREEGEAAFRCVSIDCPAQAMERLIHWASRGAMDIDGMGDEIVARLVES 482 Query: 443 HRFEHIFSWLLLTPEQLQNTPG-----------IAKSKSAQLWHQFNLARKQPFTRWVMA 491 R + + LT L + + +A+L ++ + F R + Sbjct: 483 GRVLDVADYYNLTEYDLATLETGRINKEGEPIHLGGTIAAKLMASLEASKSRTFARVLFG 542 Query: 492 MGIPLTRAALN---ASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGS 548 +GI A+ S +L+ +TE+ Q+ G G+ A+ ++ + +++ Sbjct: 543 LGIRHVGKTTGEAIAAAYPSMEKLMNATEEGLAQVDGIGAVIAKSIVTFLATEDNREVIH 602 Query: 549 WLAAQQITG 557 L +T Sbjct: 603 RLERAGVTM 611 >UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=DNLJ_HAMD5 Length = 702 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 125/598 (20%), Positives = 231/598 (38%), Gaps = 80/598 (13%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 E+I++L+ +K + Y E+ D YD L +L +W+ + S + V Sbjct: 6 EKINQLRDVLKHHEYLYHVNDAPEITDAEYDALLEKLREWESQYPELMNPDSPTQKVGAS 65 Query: 86 PLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD------------------------- 118 P V H V + + D+ + + S+ Sbjct: 66 PSTAFKPVTHQVPMLSLDNVFDEKGFLAFNKRVSERLEAESSAQKASLNPLVRDSDQKNR 125 Query: 119 ----------LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV 168 + K+DG+AV+L+Y G+L +A +RGNG +GE+ T + I ++P + Sbjct: 126 SEKNVQEALTFCCELKLDGLAVSLIYEKGELTQAATRGNGFQGENITHNIRTIQSIPLRL 185 Query: 169 SGP--LANSTLQGEIFLQREGH--------IQQQMGGINARAKVAGLMMRQDDSDTL-NS 217 G ++GE+++ + G + N R AG + + D T Sbjct: 186 KGKALPQRIEIRGEVYMPQAGFEKLNKQARANHEKIFSNPRNAAAGSLRQLDPHITAQRP 245 Query: 218 LGVFVWAWP--DG---PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KA 270 L F + +G PQ RL +L G + T A++V E +A Sbjct: 246 LNFFCYGVGLLEGGVLPQSHIQRLMQLKAWGLPVHDRIT-LCTGAEQVMAFYQEIAQARA 304 Query: 271 ELPFVTDGVVVRAAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKIS 328 L F DG+V++ E +L W A+K+ + +V ++F VG++G ++ Sbjct: 305 TLGFDIDGIVIKVDDVLLQEKLGFLAKAPRWATAFKFPAQEKTTQVLGVEFQVGRTGALT 364 Query: 329 VVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT 388 VA L PV L V N+ + + GD ++V AG IP+I +V+ + Sbjct: 365 PVARLEPVELGGALVSNANLHNADEIARLGLRIGDTVVVRRAGDVIPQIVNVIIESRPQN 424 Query: 389 KPT------PPENR-------FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG 435 P + ++ C Q L A++ L ++G+G+ Sbjct: 425 TVEIIFPHHCPICKSVAKRIEGEAVIRCTGGLFCPAQRKEALKHFVARRALDIEGLGDKI 484 Query: 436 WRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L ++ LT E+L + + + + L + ++K F R++ A+GI Sbjct: 485 IHQLVDKKYVQNPADLFHLTSEKLLSLKRMREKSAQNLLNSLKKSQKTTFARFLYALGIR 544 Query: 496 LTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWL 550 AA A L + + +++P G A+ ++++ N +++ S L Sbjct: 545 EVGETTAANLALYFGQLDLLRKADIETLKKVPDVGEVVAKNLVDFFGNEHHQQVISAL 602 >UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum V4 RepID=DNLJ_METI4 Length = 689 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 119/578 (20%), Positives = 219/578 (37%), Gaps = 49/578 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 ++ L + I+++D Y+ E V D YD L L ++ S + Sbjct: 28 EEIKKRHDELVKLIRKYDYAYYVEAHPLVSDQEYDNLYHELETLEKLHPELITPDSPTQR 87 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGVAVT 131 + PL+G V H + + K L ++ + V+PK+DGV+++ Sbjct: 88 IGETPLSGFSQVTHEIPMLSLENTYSKEELFAFLERIKRALPGKKISFTVEPKIDGVSIS 147 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFLQREGH- 188 VY++G + +RGNG G+D TQ + I ++P + P ++GE ++ + Sbjct: 148 AVYKNGLFSLGATRGNGTVGDDITQNLKTIRSLPLRLETPDPPEYLEVRGEAYMSPKDFE 207 Query: 189 ---IQQQMGG----INARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRL 236 Q++ G N R AG + + D L V + + + L Sbjct: 208 RLNAQREKEGKVLFANPRNATAGSLKQLDPRVVAERPLAVVFYGAGKLVGMKCKTQEEWL 267 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVR--NEWWKAELPFVTDGVVVRAAKEPES--RHW 292 L G + + N +EV + +LP+ TDG V+ + + Sbjct: 268 NFLKKIGLPIPIVF-WVCSNENEVYEAIGKLNECRNQLPYPTDGAAVKVNEWEYYSLLGY 326 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W A+KY + + F VG+SG I+ VA + PV L V R + + Sbjct: 327 TAKAPRWAFAYKYGAERAKTRLNNVIFQVGRSGTITPVAEMDPVFLSGTTVSRATLHNFD 386 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS--------LTC 402 + + D+ GD + + AG+ IP + V R + PPE + + Sbjct: 387 QVKRLDVKIGDVVYLEKAGEVIPEVVGVDLNQRRGTEKEIVPPEFCPSCGEKLSWEGIFL 446 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNT 462 ++ C Q R++ + + + G+GE+ L + + L E L N Sbjct: 447 RCENENCPAQLKERILHFAQRNAMDIQGLGESLVDQLVDKGIVKDVADIYDLDEETLVNL 506 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQF 519 + K + L ++K+ +R + +GIP A + +L +TE+ Sbjct: 507 DRMGKKSAQNLLKAIEESKKKDLSRLIFGLGIPHIGQKASEDLARYFGTMDKLSHATEEE 566 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 LP G AR ++ + ++ L + + Sbjct: 567 LLNLPFIGEIMARSIVNYFRKEANRRRLEKLRKKGLNF 604 >UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9Y3A9_CROTZ Length = 550 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 288/544 (52%), Positives = 381/544 (70%), Gaps = 1/544 (0%) Query: 17 SVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 S +A CP W+ +A++E++ L+ Q+ +WD+ YW G++ V D VYD + RL W+ CF Sbjct: 5 SAYASCPGWTSEQARQEVAALESQLARWDEAYWLRGENNVSDAVYDGMRQRLNVWKTCFS 64 Query: 77 SEPRDVMMPPLN-GAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYR 135 PP+ G HPVAHTGV+K+ D +LS WM ++DLWVQPKVDGVAV+LVYR Sbjct: 65 LATVSAAPPPVAAGRTHHPVAHTGVQKLKDAASLSQWMHGKTDLWVQPKVDGVAVSLVYR 124 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 G+L + ISRG+GL+GEDWT + I A+P V G LA+S LQGE+FL+REGH QQQ GG Sbjct: 125 KGELRQVISRGDGLQGEDWTARARHIPAIPLQVKGELADSVLQGELFLRREGHHQQQDGG 184 Query: 196 INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK 255 INARA+VAG MMR S LN L +F+WAWPDGP+ M RL LA GF L + +++ V Sbjct: 185 INARAQVAGAMMRNTASPLLNDLDLFIWAWPDGPKEMETRLTILAQGGFPLARAWSQPVS 244 Query: 256 NADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVK 315 + +V R R +W++ LPFVTDGVV+R A+EP + W PG+ W+ AWKY PV QV EV Sbjct: 245 SVADVTRWRKQWFREPLPFVTDGVVIREAREPPGKSWRPGEGSWVAAWKYPPVKQVTEVN 304 Query: 316 AIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIP 375 A++FAVG++GKISVVA L P+ LDDK+V +V+IGS+ RW++ D+A GD++ VSLAGQGIP Sbjct: 305 ALRFAVGRTGKISVVAQLEPITLDDKQVSKVSIGSLTRWEKLDLAEGDEVEVSLAGQGIP 364 Query: 376 RIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG 435 R+D VVWR A+R+KP PP RF++L+C FA+ C+EQFISRLVWL K V L G+GEA Sbjct: 365 RLDAVVWRPAKRSKPAPPAARFDALSCLFATGACEEQFISRLVWLSGKPVFDLAGMGEAT 424 Query: 436 WRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 WR L HRFEH+FSWL L+ + L+ TPG + ++ +LWHQFNL R+ PF RWV A+G+P Sbjct: 425 WRQLSSRHRFEHLFSWLALSVDALKQTPGFSAPRATRLWHQFNLTRQLPFQRWVKALGLP 484 Query: 496 LTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 L A A + +W QL E+ WQ LPG G+ RARQ++ + + + L WL Q+I Sbjct: 485 LPARAWQALADDTWHQLQMRDERSWQTLPGVGAERARQLVNYIHHPDVAALAQWLVEQKI 544 Query: 556 TGFE 559 GF Sbjct: 545 DGFA 548 >UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD Length = 685 Score = 601 bits (1551), Expect = e-170, Method: Composition-based stats. Identities = 129/581 (22%), Positives = 229/581 (39%), Gaps = 53/581 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 A A++ + L++QI+ + Y+ E E+ D YD L L + + F S + Sbjct: 18 AEARQRVEELREQIRYHNRKYYVEDAPEISDAEYDALYRELEELESRFPELVTPDSPTQR 77 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-----------RSDLWVQPKVDGV 128 V PL V H V ++ L W R + K+DG+ Sbjct: 78 VGGEPLEEFEEVRHAVPMLSLQNARRVEELREWDARVRRLLGPEEEGRLRYVTELKIDGL 137 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG-PLANSTLQGEIFLQREG 187 AV+L Y +G+L + +RGNG GED T+++ I +VP + P +GE++++ + Sbjct: 138 AVSLRYENGRLVRGATRGNGFVGEDVTRQLRTIRSVPDRLDDDPPGVLEPRGEVYIKLKD 197 Query: 188 HIQ--------QQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQ---LMSDR 235 + + N R AG + + D T L ++++ +G + S+ Sbjct: 198 FEEFNRRRQERGERPFANPRNLAAGSVRQLDPRVTARRPLTIYLYGVGEGYENFESHSEA 257 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAA--KEPESRH 291 L L G + + D V W + L F DGVVV+ ++ E Sbjct: 258 LAALRRYGLRVNPHTVHG--DIDSVIEECGRWAKKREALDFQVDGVVVKVDSREQQERLG 315 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 + W +A+K++P+A ++ I VG++G ++ A L PV + + R + + Sbjct: 316 AVQKAPRWAIAYKFEPLAGRTRLRDIVVTVGRTGALTPQAVLEPVNVGGVTISRATLHNE 375 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR-----GAERTKPTPPENRFNSLTCY--- 403 +E I GD ++V AG IP++ V E P ++ Sbjct: 376 DYIKEKGILIGDTVIVERAGDVIPQVVRPVPEERDGDEEEFRMPERCPVCGERVSRPEGE 435 Query: 404 ----FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 A+ C Q + ++ ++ + ++G+GE R L + L EQL Sbjct: 436 AITRCANVRCPAQALEHIIHWASRGAMDIEGLGEKLARKLFDLGLIRDVADLYELRAEQL 495 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFST 516 G+ + + L ++++PF R + +GI A L A L Sbjct: 496 APLEGLGEKSAQNLIRAIERSKERPFDRVLFGLGIRHVGSATAELIAERFSGEELLRGVG 555 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + Q+ G G AR V+E+ + +KL L + Sbjct: 556 VEELTQIEGVGEIVARAVVEYFSLEENRKLVRRLMEHGLNF 596 >UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD Length = 672 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 119/588 (20%), Positives = 220/588 (37%), Gaps = 58/588 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMMPP 86 +A L +++ + Y+ EV D YD+L L + S + D Sbjct: 5 QKAAARARELHRELAHHNYRYYVLDSPEVSDAQYDKLMRELQDLEAKHPSLQTPDSPTQR 64 Query: 87 LNGA-------VMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVT 131 + GA V+H + + + L+ + +PK+DG+A+ Sbjct: 65 VGGAAAEEFGEVVHRAPMISLANIFEDQGLTEFDERIRKLVGLPGIAYVCEPKLDGLAIA 124 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV-----SGPLANSTLQGEIFLQRE 186 L Y G + +RG+G GED T + I ++P ++ ++GE+F++++ Sbjct: 125 LRYEKGAFVQGATRGDGTTGEDVTSNLRTIRSLPMSLFPQDDVKVPDVLEVRGEVFIRKK 184 Query: 187 GHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG-----PQLM 232 + N R AG + + D T L VF++ G + Sbjct: 185 DFQKLNEKREEEGEPLFANPRNAAAGSLRQLDPRMTAARPLSVFLYECVPGEGVPVFKTH 244 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPESR 290 ++L+ L T G + Q R + + V + + + ELPF DG+VV+ E + + Sbjct: 245 IEKLEYLKTLGLPINQY--RRAEGLEGVRQAYDASLKGRHELPFEVDGMVVKVDDEDQRK 302 Query: 291 --HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 + W VA+K+ P + EV I VG++G ++ VA L PV + V R + Sbjct: 303 RLGQVSKSPRWAVAYKFPPEEESTEVMDIGIQVGRTGALTPVAHLKPVKVGGVTVARATL 362 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC------ 402 + + D+ GD + V AG IP I VV P E + C Sbjct: 363 HNEDELRRKDVRKGDTVFVRRAGDVIPEIVSVVLSKRPAD-SAPFEFPKHCPVCDAVATK 421 Query: 403 -------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 C Q + ++ ++ + ++G+G+ L T R + LT Sbjct: 422 DEDGAIIRCTGASCPAQLVEKIRHFASRLAMDIEGLGDKLAAQLVSTGRVKAFADLYALT 481 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 E L + + L +++ R++ ++GI A A L Sbjct: 482 KEDLLTLERMGDKSADNLIASLERSKQTTQRRFLYSLGIRHVGDATAKALAEAFPRSEML 541 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 ++ + ++ G A+ + + + Q ++ L A + P Sbjct: 542 FEASLEDISRVKDVGPIMAQVIHTFFQEPQNQEAIRALLAAGVQPAAP 589 >UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL Length = 711 Score = 599 bits (1546), Expect = e-170, Method: Composition-based stats. Identities = 132/620 (21%), Positives = 230/620 (37%), Gaps = 82/620 (13%) Query: 23 PAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------ 76 P + +AQ+ +++L+ +I + D Y+ + + D YD L L + + + Sbjct: 4 PTATREQAQQRMAQLRGEISEHDYHYYVLDRPTISDAEYDALFRELQRLEAAYPDLVSSD 63 Query: 77 SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVD 126 S + V G AV+H + + + L + R D +PK+D Sbjct: 64 SPTQRVAGTAQEGFEAVVHDTPMLSLDNAFEADDLVDFDRRIRDRLGVASVVYTGEPKLD 123 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQ 184 G++++L Y+DG+L +A +RG+G GED T V + +VP + G ++GE+ ++ Sbjct: 124 GISLSLTYQDGELVRAGTRGDGHTGEDVTANVRTLRSVPLRLRGDGYPGRLEVRGEVVIR 183 Query: 185 REGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQL 231 +E + N R AG + + D T L +F + D G + Sbjct: 184 KEDFERLNQARLDAGERPFANPRNAAAGSLRQLDPRITARRPLTLFTFGVGDPLALGVES 243 Query: 232 MSDRLKELATAGFTLTQTYTRAVK-NADEVARVRNEWWKAELPFVTDGVVVRAAKEP--E 288 L+ LA GF T +A + R R + LPF DG V + E Sbjct: 244 HWQVLECLAGWGFRTTAPLEHLEGVSACQAYRDRLIEERDALPFEIDGAVFKVDDLAVRE 303 Query: 289 SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 + W +A+K V+AI +VG++GKI+ +A L PV + V R ++ Sbjct: 304 QLGFTARAPRWALAFKLPAREATTVVEAIVPSVGRTGKITPLARLQPVEVSGVTVARASL 363 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV----------WRGAERTKPTPPEN--- 395 + D+ GD ++V AG IP+I DVV WR ER + P Sbjct: 364 HNADELARMDVREGDTVMVRRAGDVIPQITDVVLAKRPEGAQPWRFEERVQACPECGSAV 423 Query: 396 ---RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 + C Q ++ +++ L +DG+GE L + Sbjct: 424 QRIEGEAAHRCVGGLYCPAQREGAILHFASRRALDIDGLGEKIVEQLVAKGLVVDLADLF 483 Query: 453 LLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALN---------- 502 L QL + + L + AR R++ A+GIP Sbjct: 484 RLGHAQLAGLERMGDKSADNLLAALDRARSTTLARFLYALGIPHVGEVTARRLAEAAYGL 543 Query: 503 ----------------------ASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN 540 A + +++ + + + G AR + + Sbjct: 544 MVAVPRGDRAALRAAAGLDAQTAITSEALLRVMAAPADDLEAIEDVGPVVARAIAGFFAE 603 Query: 541 AQIKKLGSWLAAQQITGFEP 560 +++ L A + EP Sbjct: 604 PHNRQVVDHLCAAGVHWPEP 623 >UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidans RepID=DNLJ_ACIF2 Length = 671 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 130/578 (22%), Positives = 222/578 (38%), Gaps = 56/578 (9%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 E I +L+ ++ ++ Y++E + D YD L + S + V Sbjct: 10 ERIQQLRAELVAANNAYYREDSPTLSDAEYDARLRELRTLEDRNPQWQSADSPTQRVGAA 69 Query: 86 PLN--GAVMHPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGVAVTLVYR 135 P+ G V + + T + + D++ S W+ RE L +PK DG++V + Y Sbjct: 70 PVEVFGEVHYAIPLTSLDNVFDQDGFSDWLARVQKGLGREDVPLSAEPKFDGLSVNIRYI 129 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQ- 192 +GKL +A +RG+G GED T V I VP ++G ++GE+ + + Sbjct: 130 EGKLVQAGTRGDGQTGEDVTANVRTIRNVPLQLTGKDWPELLEVRGEVVIPVAAFRRLNG 189 Query: 193 -------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGP----QLMSDRLKELA 240 N R AG + + D S T L F W W + + ++ L+ Sbjct: 190 ERLRAGDNPFANPRNAAAGSLRQLDSSVTAKRPLAYFPWGWGESSVPLGKSHIAVMERLS 249 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP--ESRHWLPGQ 296 GF +T +Y R V E R +E + +PF DG+V + E + Sbjct: 250 AWGFEVT-SYLRGVHELTECQRYFSEMQKIREGMPFEIDGLVFKVDDLLAREQLGFTARA 308 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K+ + V+ I +VG++G I+ VA L PV + V R ++ + Sbjct: 309 PRWAIAYKFPAHEERTVVEDILASVGRTGVITPVAVLKPVQVGGVTVSRASLHNQDEVDR 368 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP-ENRFNSLTC------------- 402 DI GD +LV AG IP + V+ ER T P C Sbjct: 369 KDIRVGDTVLVRRAGDVIPEVVMVIKE--ERPPATQPWHMPQRCPVCGSEVLRLANESAH 426 Query: 403 -YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 C Q + + +++ + + G+GE L + L L Sbjct: 427 RCMGGLYCPAQRMGAIRHFASRRAMDIRGLGEKLVEQLVGHGLVHTVADIYHLDEAALCG 486 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ 518 +A + +L + + +R R++ A+GI A A L+ +T + Sbjct: 487 LERMASRSAQKLLAEIDRSRHTSLPRFLYALGIRQVGEGTAKSLAIYFGDLDPLMAATPE 546 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 Q +P G A V + + + + L A + Sbjct: 547 LLQNIPDVGPIVAESVAHFFAQPHNRDVIAALRAAGVQ 584 >UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA Length = 666 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 126/580 (21%), Positives = 217/580 (37%), Gaps = 50/580 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 A A++ + L++ I++ + Y+ + + D YD L L + + S Sbjct: 1 MDLAAARQRVEELRRLIEEHNYRYYVLDQPSISDREYDALMQELIALEEAYPELRTPDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVA 129 + V P V HP + ++ L + R D ++ K+DG+A Sbjct: 61 SQRVGGAPREEFNQVRHPQVLLSLNDAFNEGDLLEFDRRVRDLAGRPVEYVIEAKIDGLA 120 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH- 188 V L YRDG +RG+G GE+ T + I A+P + PL ++GE+++ + Sbjct: 121 VALTYRDGLFTLGATRGDGQVGEEVTANLKTIPALPLRLRRPLPFLVVRGEVYMPKVAFT 180 Query: 189 ----IQQQMG---GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW----PDGPQLMSDRL 236 +++ G N R AG + + D T SL +FV+ + L Sbjct: 181 ALNAAREEAGEPLFANPRNAAAGSLRQLDPKITASRSLSLFVYQVISLTGAEVATQAGAL 240 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW---WKAELPFVTDGVVVRAAKEPES--RH 291 LA GF + Y + V W +A LP+ DG+V++ Sbjct: 241 DFLAELGFPVNP-YRVVAPDIQAVLEEVKAWTPERRASLPYEIDGLVIKVNDLALHSVLG 299 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W +A+K+ A V+ I VG++G ++ A L PV L V R + + Sbjct: 300 ATAKAPRWAMAYKFPAEQATARVEGIILRVGRTGVLTPTAVLTPVRLAGTTVSRATLHNE 359 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENR-----------FN 398 +E DI GD ++V AG IP + V+ R T PE Sbjct: 360 DYIREKDIRIGDTVIVQKAGDIIPEVVAVIPERRTGSEEVFTMPERCPACGAAVVRPPGE 419 Query: 399 SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 + C Q + ++ ++ + + G+G A L + L E Sbjct: 420 AAHRCTGGLACPAQVLEGIIHFASRGAMDIQGLGPAIVAQLLEAGLIHDAADLYYLKEED 479 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 L + ++ L ++KQP R + A+GI A + A S +L + Sbjct: 480 LLKLERFGQQSASNLLAAIAASKKQPLERLIFALGIRNVGQRAARVLADHFGSLDKLAAA 539 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 T + LP G A + E+ + + + L + Sbjct: 540 TVEELTALPDIGPRIAENIREFFGEPRNRAVLEKLKKAGV 579 >UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_HERAR Length = 696 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 118/588 (20%), Positives = 210/588 (35%), Gaps = 57/588 (9%) Query: 23 PAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR------CFG 76 P S A + L+ ++ + + Y+ V D YDQL L + F Sbjct: 22 PDASDPSA--RAAWLRSELNRHNYAYYVLDNPIVPDAEYDQLFRELQALEASHPELLVFD 79 Query: 77 SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWM---------RERSDLWVQPKV 125 S + V L V H V + + + + RE + + K Sbjct: 80 SPTQRVGALALTAFPPVTHSVPMLSLGNGFEDEDVLAFDKRVSEGLNSREEVEYATELKF 139 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFL 183 DG+A+ L Y DG L +A +RG+G GE+ T + + A+P + + P ++GE+ + Sbjct: 140 DGLAINLRYEDGVLVQAATRGDGATGENVTANIRTVRAIPLRLHTNNPPKVLDVRGEVMM 199 Query: 184 QREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DGP 229 + + N R AG + + D T SL F + D P Sbjct: 200 YKADLAKLNARQRDAGAKEFANPRNAAAGSLRQLDSRITAQRSLRFFSYGIGLLEGADMP 259 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAA--K 285 S L A G + V+ + + +LP+ DGVV + Sbjct: 260 ASHSALLDWYAELGIPVCSERA-VVRGVQGLLEFYKATSEKRPQLPYEIDGVVYKVNRVD 318 Query: 286 EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + ++ + +A K+ + V+ I+ VG++G I+ VA LAPV++ V Sbjct: 319 QQLQLGFVSRAPRFAIAHKFPAEEALTTVQDIEVQVGRTGAITPVARLAPVLVGGVTVTN 378 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS---- 399 + + + DI GD ++V AG IP + V R A P + Sbjct: 379 ATLHNEDEVRRKDIQIGDTVIVRRAGDVIPEVVAFVPERRPASARPFIMPSSCPVCGSPI 438 Query: 400 --------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 C C Q L+ +++ + ++G+G+ L H Sbjct: 439 VRLEDEAIARCSGGWVKCAAQRKGGLLHFVSRRAMDVEGLGDQLVEQLVDKHIITTAADL 498 Query: 452 LLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERS 508 L L +A + + +++ R++ A+GI A A + Sbjct: 499 YKLGFRALAELDRMADKSAQNVLDALEKSKRTTLARFIYALGIRHVGEATAKELARHFGN 558 Query: 509 WSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 LL ++ + ++ G A + + +A +L L A +T Sbjct: 559 LDALLQASPEQLLEVADIGPVVAASITAFFTDAMNIELIEQLRAAGVT 606 >UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 Length = 726 Score = 596 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 129/598 (21%), Positives = 223/598 (37%), Gaps = 68/598 (11%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + + L++QI+ + Y+ + + D YD L L + S Sbjct: 1 MNNDHLTRRVEALREQIRYHNYRYYVLDEPVISDAEYDALMRELRALEAAHPELVTPDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKVDG 127 + V PP V H V + D+ + W R V+PK+DG Sbjct: 61 TQRVGAPPGEQFAKVQHVVPMLSLANASDEAEVRAWYDRVVRLLGNDARVAFVVEPKIDG 120 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV----SGP------------ 171 +AVTL+YR+G L + +RG+G GED T + I +P + S P Sbjct: 121 LAVTLIYRNGILVRGATRGDGETGEDVTANLRTIPGIPLRLGAFASNPEGQTNGAPVQAV 180 Query: 172 -LANSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNS-LGVF 221 ++GE++++ ++ N R AG + ++D + T L F Sbjct: 181 IPPLIEVRGEVYMRIADFLRLNEQLAASGEKVAANPRNAAAGSLRQKDPAITARRPLRFF 240 Query: 222 VWAWPDGP----QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFV 275 + Q + L L T GF + + R + D+ EW + EL + Sbjct: 241 AYGIGQIEGVQVQTQWETLNLLRTLGFPVNRDARRF-ERLDDALAYCREWMTRRDELEYE 299 Query: 276 TDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DGVV++ + + W +A+K+ V+ + I VG++G I+ A + Sbjct: 300 VDGVVIKIDSLAQQAQLGVVGRDPRWAIAFKFPAREAVSRLIDIVVNVGRTGVITPNAVI 359 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV---WRGAERT-- 388 PV + V+ ++ + E DI GD ++V AG IP I + G+ER Sbjct: 360 EPVNIGGVTVRNASLHNADYIAERDIRIGDYVIVKRAGDVIPYIVGPIVARRDGSERPWQ 419 Query: 389 -------KPTPPENRFNSLTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALH 440 TP E + + +C Q R+ ++ + + GIGE + Sbjct: 420 MPATCPACGTPLERAEGEVAYRCPNFGICPAQITRRIEHFVSRGAMDIAGIGEKQVQLFV 479 Query: 441 QTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR-- 498 + + + LTP+ N G + A L ++ +P R ++ +GI Sbjct: 480 ERGWVQDVADLYTLTPDHFANVEGYGPKRVANLLSAIAGSKNRPLHRLIVGLGIRYVGEV 539 Query: 499 -AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 A + A S L ++ L G G A V + + K L + L + Sbjct: 540 VAQILADHFGSLDALAAASADEIDALEGIGPAIAASVAAYFARPESKALIAKLKRAGV 597 >UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=DNLJ_ACHLI Length = 659 Score = 596 bits (1537), Expect = e-169, Method: Composition-based stats. Identities = 136/578 (23%), Positives = 241/578 (41%), Gaps = 52/578 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMMPPL 87 Q I L++QI + + Y + + + D VYD L L + + + + + Sbjct: 2 DIQTRIKELRKQINEANYLYHTKDQPIISDFVYDGLMRELIELETKYPEYDDETSPTKKI 61 Query: 88 NGAVM-------HPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVY 134 G V+ H V + + +K L ++ + + K+DG+AVTL+Y Sbjct: 62 GGVVLDAFKKHTHTVPMMSLSNIFNKEELKVFYDRIQKVIPNTSFTTELKIDGLAVTLIY 121 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 G KA +RGNG+ GED T+ V I +P +S PL + ++GEI++ + + + Sbjct: 122 EKGIFKKAATRGNGVVGEDITENVKTIKTLPLQLSKPL-DIEVRGEIYMSHKTFKEVNLE 180 Query: 195 --------GINARAKVAGLMMRQDDSDTL-NSLGVFVW---AWPDGPQLMSDRLKELATA 242 +N R AG + + D L +F + + + L+ L+ Sbjct: 181 RANSNLDLFVNPRNAAAGTVRQLDSKVVAKRRLDLFTYTVVGASNFNSTQKETLEFLSEL 240 Query: 243 GFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHWLPGQAE 298 GF + Y + V N D ++ + + + LP+ TDGVV++ + E+ + + Sbjct: 241 GFPVNPHY-KLVDNLDALSDAIDNYDILRKTLPYDTDGVVIKVNQFEHYETIGYTAKYPK 299 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 + A+K++ Q+ +V+ I F VG++G I+ VA L PV + V R + + D Sbjct: 300 YAGAYKFEAEKQITKVEDIIFQVGRTGVITPVAVLTPVFISGSLVSRATLHNEDYILNKD 359 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-------------YFA 405 I DQ+LV AG+ IP + +VV RT P E + C Y A Sbjct: 360 IRIDDQVLVHKAGEIIPEVIEVVL--GSRTNQAPFEMVKHCPACESNLVRKQGEADYYCA 417 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTP 463 +D C + + L+ ++ + +D +GE LH + I L +QL+ P Sbjct: 418 NDNCPGKNVFGLIHFASRAAMDIDTLGEKVVELLHDQTYLQTIPDIYKLHTFKDQLEELP 477 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNAS---DERSWSQLLFSTEQFW 520 G K K +L + ++ Q R + +GI A + + S + L + + Sbjct: 478 GFGKKKVEKLLNAIEASKMQTLDRLIFGLGIKNVGAKVAKTLLNHYPSITLLADAKYEDL 537 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 Q+P G A V + N + + L + Sbjct: 538 IQIPDIGPEIADSVTTYFSNESNQHMLEELKNLGLQMT 575 >UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD Length = 690 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 116/574 (20%), Positives = 218/574 (37%), Gaps = 55/574 (9%) Query: 41 IKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLN--GAVM 92 ++ + Y+ V D YD+L +L + + S V P + G V Sbjct: 32 LRHHNYRYYVLDAPVVSDAEYDRLFQQLQTLEAEYPVLQTPDSPTHQVGGPVRDELGTVT 91 Query: 93 HPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 HP ++ + +++ + + RE +PK DG+AV L+Y DG+L + + Sbjct: 92 HPAPMLSLKAVYEEDEVRNFAETCREELGRETVTYIAEPKFDGLAVELIYEDGRLVQGAT 151 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGP----LANSTLQGEIFLQREGH-----IQQQMG- 194 RG+G GE+ T V I VP + ++GE +++++ +++ G Sbjct: 152 RGDGETGEEITANVKTIKGVPLRLRDDARPVPDRLVVRGEAYMRKDEFNAFNRRREEEGK 211 Query: 195 --GINARAKVAGLMMRQDDSDTLNS-LGVFVWAW----PDGPQLMSDRLKELATAGFTLT 247 N R AG + + D + T L ++ + ++ L+ L G + Sbjct: 212 KVFANPRNAAAGSLRQLDSNITARRPLRIYFYEIAPVDGRDFATHAEVLEALPEWGLRVC 271 Query: 248 QTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAW 303 + + R D + +LP+ DG+V++ E+ W A+ Sbjct: 272 EDHIRRCDGIDAALAHHAALVDRRDDLPYEIDGLVIKVNDFDGHETLGVRDRDPRWAAAY 331 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 K+ P ++ + VG++G+I+ VA LAPV + +V R ++ + DI GD Sbjct: 332 KFPPRRATTSIEDLFVQVGRTGRITPVAVLAPVEVGGVEVTRASLHNQNEIDRKDIRIGD 391 Query: 364 QILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC--------------YFASDVC 409 +L+ AG IP++ V+ + T+ P C C Sbjct: 392 TVLIERAGDVIPQVVKVIEDERDGTE-APYHIPDACPVCGSEVVLSDDKKQAFCTGGMTC 450 Query: 410 QEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSK 469 QF RL +++ ++G+G+ L + I L L A Sbjct: 451 PAQFRERLKHYASREATDIEGLGDKRAEQLIDAGLIQTISDLYELEKADLLQLERYADKS 510 Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGT 526 + L + + +Q R++ A+GIPL A L A + L+ + E + Sbjct: 511 AQNLIDEIEASLEQDLDRFLYALGIPLVGSATARLLAQHFDTLDALVDADEDALTTIDDI 570 Query: 527 GSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 G A + + + + + + +T P Sbjct: 571 GPEVAHSIATFFADDANRGVIDEMRDAGLTLTNP 604 >UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DNLJ_OENOB Length = 684 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 131/587 (22%), Positives = 237/587 (40%), Gaps = 54/587 (9%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------ 77 + +AQ EI L ++ +W +Y++E VED VYD ARL ++ + S Sbjct: 12 DLTFTQAQAEIRDLSDELTKWGREYYEEDNPSVEDYVYDAHYARLVALEKAYPSLAMPDS 71 Query: 78 EPRDVMMPPLNG-------AVMHPVAHTGVRKMVDKNALSLW-------MRERSDLWVQP 123 + V V+HPV + + L W + ++ Sbjct: 72 PTQHVAAGNQTKNDSRGLQKVVHPVPMLSLGDVFSIQELLDWDLVTTKNAGSQQKYNLEL 131 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DG+A++L Y +G+L +A +RG+G GE+ T V I+ +P+ ++ PL ++GEI++ Sbjct: 132 KIDGLAISLRYENGRLIQASTRGDGSIGENVTDNVKTITEIPKVLNEPLT-IEVRGEIYM 190 Query: 184 QREGHI----QQQMGG----INARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQ 230 ++E Q+ G N R AG + + D T L F++ G Sbjct: 191 RKEAFADLNQQRDEEGKTIFANPRNAAAGSLRQLDPKITAKRHLSSFIYYTAQNDVLGVN 250 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPE 288 SD L+ GF + + + + EV +E+ + LP+ DGVVV+ Sbjct: 251 TQSDVLERFRQLGFPVNSS-NKVIDRMTEVKDYIDEYTIKRDNLPYGIDGVVVKVNDLDV 309 Query: 289 S--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 W +A+K+ P + V+ I + VG++G ++ A + PV L KV+R Sbjct: 310 ENELGNTVKIPRWSIAYKFPPEEALTVVRDITWTVGRTGVVTPTAIMDPVFLAGTKVKRA 369 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT---------KPTPPENRF 397 ++ + QE D+ GD + + AG IP + V+ + P+ Sbjct: 370 SLHNPDYLQEKDVRIGDTVTLHKAGDIIPEVGQVILKKRPADAQAYPIPVYCPSCKSKLV 429 Query: 398 N---SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 + + + C Q L+ ++ + +DG+G L + I L Sbjct: 430 HVQGEVALRCINPECPAQIKEGLIHFASRNAMNIDGLGPRVVEQLLSKNLIRKISDLYAL 489 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 T QL A S L + +R+ R + A+GI A + A+ ++ Sbjct: 490 TESQLTTLDKFADLSSKNLIQAIDRSRQNSVERLITALGIRGVGAKAAKVLAAHFKNLRN 549 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 L + + ++ G G A + ++ + + L + L Q+ Sbjct: 550 LQNAGAEEIAEIDGVGQVMADAIRQYFNSESVASLINELENFQVNFD 596 >UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB Length = 680 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 123/583 (21%), Positives = 220/583 (37%), Gaps = 61/583 (10%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPP 86 E+ L+++I + + Y+ + E+ D YD L RL + + S + V P Sbjct: 10 EVENLRREINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDSPTQRVGAEP 69 Query: 87 LN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW--------VQPKVDGVAVTLVYRD 136 L G V HP + L W + L +PK+DG+AV L YR+ Sbjct: 70 LKAFGIVNHPYPLLSLANAFSDTELEAWYQRVKKLLGNIPFQIDCEPKMDGLAVALTYRN 129 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTV-SGPLANSTLQGEIFLQREGHIQQQMG- 194 GK +RG+G +GE+ T+ + I ++P ++GE++L + G + Sbjct: 130 GKFATGATRGDGFQGENITRNLRTIHSIPLNAEPNAPPVFEVRGEVYLSKNGFAKLNRER 189 Query: 195 -------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG-----PQLMSDRLKELAT 241 N R AG + + D S T L +F++A P L + Sbjct: 190 ADKGLPLFANPRNAAAGSLRQLDPSVTAERPLDIFIYALGYSEDSLLPDSHWQILDYFSK 249 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESRHWLPGQA 297 GF + R V +E + +A LP+ DGVV + + + Sbjct: 250 IGFRINP-LNRLVNTLEEAKEYYRQMAANRASLPYEADGVVFKVDSVSLQHRLGDVGREP 308 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 W +A+K+ + +K I +VG++G ++ A L PV + V++ + + Sbjct: 309 RWAIAYKFPAEQVMTRLKKIGISVGRTGTLNPFAVLEPVNVGGVVVKQAALHNEDDILRK 368 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGA---------ERTKPTPPENRFNSLTC------ 402 DI GD +++ AG+ IP + V E + P NR C Sbjct: 369 DIREGDTVIIQRAGEVIPEVVAPVLSKRNPESKPFRMEESLFNPNLNRTACPVCGGEIYR 428 Query: 403 -------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 Y A+ C QF +L ++ + + GIGE+ L Q +++ LT Sbjct: 429 PAGEAMHYCANVSCPAQFERQLEHFVSRGAMDIRGIGESLSVILAQQGLVKNVSDLYYLT 488 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 L P + + + + ++ +P R + +G+ A L + + L Sbjct: 489 TADLLQLPRMGEKSADNIIDAIADSKTRPLDRVIFGLGVRHVGNETATLLSRHYGNIWAL 548 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + Q +P G A ++ + + + L + Sbjct: 549 AKTGLGELQTIPDIGDKIASSIVAYFSEEKNVAVIRRLEEAGV 591 >UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F129_9PROT Length = 670 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 123/580 (21%), Positives = 212/580 (36%), Gaps = 54/580 (9%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPP 86 I L+ Q+++ + Y+ + D YD+L L + G S R V PP Sbjct: 10 RIEHLRSQLREHNYRYYILDAPVISDAEYDRLLRELESLEAELGEPVPADSPTRTVGAPP 69 Query: 87 --LNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYRD 136 + H A + + ++R + V+PKVDG+AV L Y Sbjct: 70 SQVFTTRTHGEALLSLANAFSAGEVEAFVRRIGETLPATTLSFIVEPKVDGLAVNLRYEQ 129 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-----GPLANSTLQGEIFLQREGHI-- 189 G L A +RG+G GED T V I +P + ++GEI++ RE Sbjct: 130 GSLTIAATRGDGTTGEDVTDNVRTIGDIPWQLKQVDGIELPTVLEVRGEIYMSREAFAAL 189 Query: 190 ------QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG----PQLMSDRLKE 238 + N R AG + + D T LG F + G S L+ Sbjct: 190 NARQDAEGAQPFANPRNAAAGSLRQLDARVTASRRLGFFAYGAGLGGRAIASSQSQLLER 249 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESRHWLP 294 LA GF + +T + + + + + ++P+ DGVV + + + + Sbjct: 250 LAGFGFAVQKTA--CADDLEGLLATYQQLQQQRPDMPYEIDGVVYKLDEFALQDRMGAVA 307 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 W +A K+ VK I + VG++G I+ VA + PV + V R + ++ Sbjct: 308 RSPRWAIAHKFPAEEVTTTVKDIIWQVGRTGVITPVADMEPVAVGGVVVSRATLHNIDEL 367 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENR-----------FNSLTCY 403 + + G +++V AG IP + V A+ P P Sbjct: 368 KRKQVYAGARVIVRRAGDVIPEVVRAVDVDAQAMMPKAPAQCPVCGASLFRLEGEVAIRC 427 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 C Q RL ++ + ++G+G+ L I L Sbjct: 428 SGGLSCSAQLTERLRHFVSRGAMDIEGMGDKLIARLVDEGCLNDIADLYEFDYASLHEWQ 487 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFW 520 G+ + K L ++++P R++ A+GI AA A+ L+ + E+ Sbjct: 488 GMGEKKITNLQLSIERSKQRPLARFLHALGIRHVGSATAAALATHFADLELLMQADEEAL 547 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 +P G A ++ + + + L A +T P Sbjct: 548 LAVPDVGPEVAGSILSFFREQHNRDVIDRLLAAGVTPEAP 587 >UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA Length = 707 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 123/610 (20%), Positives = 231/610 (37%), Gaps = 69/610 (11%) Query: 18 VWAVCPA-WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 + PA PA E I+ L+ ++ Y+ + + D YD+L L + Sbjct: 7 FASPTPAPMPPASVIERIAALRAELDLHAHRYYVLDEPSIPDAEYDRLFKELQALEAAHP 66 Query: 77 ------SEPRDVMMPPLN--GAVMHPVAHTGVR-----------KMVDKNALSLWMRE-- 115 S + V PL +V H + +R + L ++E Sbjct: 67 ELLTPDSPTQRVGGKPLGQFASVRHRIPMLSIRTETDTEATGARNFDTRVRKELGLKESD 126 Query: 116 -RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN 174 + + K DG+A++L Y +G L +A +RG+G GED TQ + I +P + Sbjct: 127 PPVEYVAELKFDGLAMSLRYENGVLVQAATRGDGEVGEDVTQNIRTIRQIPLRLPADAPP 186 Query: 175 S-TLQGEIFLQREGH--------------IQQQMGGINARAKVAGLMMRQDDSDTL-NSL 218 ++GE++++R+ + + +N R AG + + D + L Sbjct: 187 VMEVRGEVYMRRDEFEALNERQREKIAKGAKGEKTFVNPRNAAAGGVRQLDPAFAAERRL 246 Query: 219 GVFVWAWPD-------GP--QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW-- 267 F + + GP + + L+ L + F + TR A E+ Sbjct: 247 SFFAYGVGEITPPEEGGPVFETHFELLQTLKSWCFPVA-AQTRLAYGAPELIAFHEAIGR 305 Query: 268 WKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSG 325 + +LP+ DGVV + R ++ + W VA KY Q+ V AI VG++G Sbjct: 306 QRDQLPYDIDGVVYKVNSLALQRKMGFVSREPRWAVAHKYPAQEQLTTVLAIDIQVGRTG 365 Query: 326 KISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA 385 K++ VA LAPV + V + + + D+ GD ++V AG IP + V+ Sbjct: 366 KLTPVAKLAPVFVGGVTVTNATLHNEDEARRKDVRVGDTVIVRRAGDVIPEVVSVLLDKR 425 Query: 386 ERTKP------TPPENRFNSLT-------CYFASDVCQEQFISRLVWLGAKQVLGLDGIG 432 + P P +++ C Q ++ K+ + ++G+G Sbjct: 426 VQDAPQFSMPRQCPVCGSDAVREEGEADYRCTGGLFCAAQRKEAILHYAHKRAVEIEGLG 485 Query: 433 EAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAM 492 + L T + L L + +A+ ++ L +++ R+V + Sbjct: 486 DKLVEQLVDTGVIRTLPDLYRLGFTSLASLDRMAEKSASNLVAALEKSKQTTLPRFVFGL 545 Query: 493 GIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSW 549 GI A A ++ ++E+ ++ G A+ + + E +++ Sbjct: 546 GIRHVGEATAKALARHFGQLDSIMDASEEQLLEVADVGPIVAKSIRTFFEQPHNREVVEQ 605 Query: 550 LAAQQITGFE 559 L A +T E Sbjct: 606 LRACGVTWEE 615 >UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_ALCBS Length = 777 Score = 593 bits (1530), Expect = e-168, Method: Composition-based stats. Identities = 113/578 (19%), Positives = 213/578 (36%), Gaps = 54/578 (9%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPP 86 + L+ Q+ W Y+ + V D YD++ L + + S + V P Sbjct: 10 QAQSLRDQLNDWSYRYYVQDDPAVPDAEYDRVFRALKDLEAQYPDLVTADSPTQRVGDVP 69 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMR---------ERSDLWVQPKVDGVAVTLVYR 135 L+ V H V + D L + + E D +PK+DG+AV+L+Y Sbjct: 70 LDAFEQVQHEVPMLSLDNAFDDEELWAFDKRIRERLDVSEIIDYVAEPKLDGLAVSLLYE 129 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGH----- 188 +G+L +A +RG+G GE+ T I +VP + G ++GE+ + G Sbjct: 130 NGELVRAATRGDGQTGENITVNARTIRSVPLKLRGNDVPKRLEVRGEVVMPHAGFEELNA 189 Query: 189 IQQQMG---GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DGPQLMSDRLKEL 239 QQ+ G N R AG + + D T L + ++ + P S L L Sbjct: 190 RQQEAGLKLFANPRNAAAGSLRQLDSRITASRPLEFYAYSMAQLEGWEHPPTHSAMLDAL 249 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKE--PESRHWLPG 295 G + R + + R + L + DGVV + + + ++ Sbjct: 250 RDWGLRVNPE-IRVCHGVEALLRFYQGILEKREHLDYDIDGVVYKVNRFDWQDDLGFVSR 308 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A K+ ++ + + + VG++G ++ VA L PV + V + ++ Q Sbjct: 309 APRWAIAHKFPAQEELTVLNGVDWQVGRTGALTPVARLEPVHVGGVIVSNATLHNIDEIQ 368 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT------KPTPPENRFNSLT-------C 402 DI GD ++V AG IP++ + + P L Sbjct: 369 RLDIRIGDTVVVYRAGDVIPKVVRALPERRPANAQGIALPSSCPVCGSEILRGHDQVVAR 428 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNT 462 +C +Q + +++ + +DG+G+ AL + L EQ+ Sbjct: 429 CTGGLICGDQRREAIKHFASRRAMDIDGLGDKLVDALVDQELITTVADLYRLKAEQVAGL 488 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 + + + L ++ R++ A+GI A A + + Sbjct: 489 ERMGEKSADNLIAALEASKTVGLGRFLFALGILQIGEETAKNLADCFGDLDSIRHAPLLL 548 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 +P G A+ + + + + + L AQ ++ Sbjct: 549 LLAVPDVGLEVAKAIGAFFAESDNEAVIDGLLAQGVSP 586 >UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU Length = 666 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 115/576 (19%), Positives = 224/576 (38%), Gaps = 53/576 (9%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 ++ I L++ I+ + Y+ K E+ D YD+L L + S + V Sbjct: 5 KQRIMELRELIRYHNYRYYVLDKPEISDAEYDRLLQELRALEEAHPELIIPDSPTQTVGS 64 Query: 85 PPLNGA---VMHPVAHTGVRKMVDKNALSLWM---------RERSDLWVQPKVDGVAVTL 132 L V HP + ++ ++ + E + ++ K+DG++V L Sbjct: 65 AILETPFTPVPHPTRMYSLGNAFSQDDIADFEASINRFLGREESREYVLEYKIDGLSVNL 124 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ- 191 +Y +G + ++RG+GL GED T + I +P+ + PL + ++GEI+L + ++ Sbjct: 125 IYEEGVFRQGLTRGDGLTGEDVTPNLLAIPDIPRQLPQPL-DLEVRGEIYLPIQTFLELN 183 Query: 192 -------QMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQLMSDRLKEL 239 + N R AG + ++D + + L + G + L++L Sbjct: 184 TQLEEAGEPPFKNPRNAAAGSLRQKDPRISASRGLRGLFYGVGRPESLGVGTQQELLEKL 243 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPE--SRHWLPG 295 GF++ + + V+ + + + + LPF DGV V+ + Sbjct: 244 GQLGFSV-DPHYQVVRGVEGIEQGYQAMLAARKSLPFEADGVTVKLNNLSLWSELGYTAK 302 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 + +A+K+ + V + F VG++G+++ VA L PV LD V RV + + Q Sbjct: 303 TPRFAIAYKFPAEEKTTRVLRVIFQVGRTGRVTPVAELEPVFLDGSTVSRVTLHNESYVQ 362 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-----------YF 404 E + GD +LV +G IP + VV P E + C Sbjct: 363 ELGLRIGDTVLVHKSGGVIPEVLRVVTEAPRGHAPV--EWPTHCPECGTALELSGKIHLC 420 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 + +C + + +++ + + G+GE L +T L E + Sbjct: 421 PNPLCPAKAFEAIRHFASRRAMDIQGLGEKLIEQLLETGLVRDAADLYNLKKEDIAALER 480 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 A+ + L Q ++ + R + A+GIP A A +L +T + Sbjct: 481 KAEKSAQNLIEQIEASKSRGLERLLFALGIPQVGESTARALAKRFGHLDSILKATVEELD 540 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 +P A+ + + +++ L A + Sbjct: 541 AVPDIAETTAQAIHQALARPEMQSFIERLRAAGLVF 576 >UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=DNLJ_GEMAT Length = 689 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 137/590 (23%), Positives = 229/590 (38%), Gaps = 54/590 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 P + E L++Q+ +Y+ + + D YD+L L + + S Sbjct: 7 TPPHQTVERARELREQLGTAQHEYYVLDRPTLSDQEYDRLFRELQGIEAEYPTLCTEDSP 66 Query: 79 PRDVMMPPLNGAV--MHPVAHTGVRKMVDKNALSLWMRE----------RSDLWVQPKVD 126 R V P + H V + D + L + + S V+ K+D Sbjct: 67 TRRVGAPVQSAFSPHRHLVRMLSLDNAFDLSELEDFEQSLKRVVGDAIHTSGYTVELKID 126 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQGEIFLQ 184 G AV L YR+G L A +RG+G GED T V I VP + G ++GE++L Sbjct: 127 GAAVALTYREGVLVTAATRGDGTDGEDVTANVRTIRGVPLRLHGDNHPPLMEVRGEVYLP 186 Query: 185 REGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWA--WPDG---PQ 230 G + +N R AG M + D ++T L F +A PDG + Sbjct: 187 FAGFERMNEARVAAGEPVYVNPRNAAAGSMRQLDSANTAARPLRFFGYAAVLPDGSAPAR 246 Query: 231 LMSDRLKELATAGFTLTQTYTRA--VKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPE 288 + L++L+ G + R ++ A+ A V +A L F DG VV+ Sbjct: 247 SQWELLEQLSAWGVPVAPHRQRCHTIQEAEAWATVVEHETRATLGFAIDGGVVKVNDMAL 306 Query: 289 SRHW---LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 W VA K+ P + +++ I VG++G ++ A L PV + V Sbjct: 307 QDELGIRADRTPRWGVARKFAPDMALTKLRRIDVNVGRTGVLTPFAVLEPVDVGGATVTF 366 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT------------KPTPP 393 ++ + + D+ GD + V AG IP + V + + TP Sbjct: 367 ASLHNADQIAAKDLREGDTVQVVRAGDVIPYVLGPVPEQRDGSQQPWSMPTQCPRCNTPV 426 Query: 394 ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 E + + Y + C + + LV +K L +DG+ A + L + Sbjct: 427 ERYGDDVAVYCPNVACPGRQLEGLVHFSSKDALDIDGLSYARIQQLLDAGLVHDVADLFD 486 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWS 510 +T +QL + AK + L A++QP +R + +GI A L + S Sbjct: 487 ITVDQLTSLERFAKKSAENLVAAIAAAKQQPLSRLMFGLGIRHVGAQAAQLLSRQYGSLD 546 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 L+ +T + + G GS A+ V + + + L L A+ + EP Sbjct: 547 ALMNATAEQLGAVRGIGSIIAQSVASYFADPTTRALMERLRARGLRFDEP 596 >UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ_DESOH Length = 682 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 122/588 (20%), Positives = 208/588 (35%), Gaps = 58/588 (9%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 + A+E ++ L+ ++ + + Y+ + E+ D YD+L L + + S Sbjct: 4 TLDKSEAKERVTFLRNELHRHNHLYYIKDAPEISDAEYDRLFRELAELEALHPDLADPAS 63 Query: 78 EPRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRER---------SDLWVQPKVD 126 V PP V + + L + +PK+D Sbjct: 64 PTARVGAPPTGDLATVTRTIPMLSISNAFADEELFKFDERVRRSLQTGDPVTYLAEPKLD 123 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP----LANSTLQGEIF 182 G AV LVY G+L A +RG+G+ GE T I +VP ++G ++GE+ Sbjct: 124 GTAVELVYEKGRLVMAATRGDGVTGEVITPNARTIGSVPLHLTGDAVPMPNLLEVRGEVV 183 Query: 183 LQREGHI--------QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DG 228 + +EG + + NAR AG + + D T L + + D Sbjct: 184 MTKEGFEKLNALRLERDEPLFANARNAAAGSLRQLDSRVTASRPLTLIAYGIGRFSEIDA 243 Query: 229 PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKE 286 + + LA GF ++ R + V E + LP+ DG+VV+ + Sbjct: 244 ISTQHEIVTRLADFGFKTN-SHVRWDLDIKGVIDFYRFLEGIRPSLPYDIDGMVVKVDRL 302 Query: 287 PESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 R W++A+K+ + + AI VG++G ++ VA L PV + V Sbjct: 303 DFQRTLGATSRSPRWVIAYKFAASQETTRLVAIDVQVGRTGALTPVALLEPVTIGGVTVS 362 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-- 402 R + + DI GD +LV AG IP + V+ G TP + C Sbjct: 363 RATLHNEDEIARKDIRVGDAVLVQRAGDVIPEVVQVIT-GRRTGNETPFQMPATCPVCGT 421 Query: 403 -----------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 + C Q R+ AK +DG+G+ L Sbjct: 422 PVVREPSEAVTRCVNAACPAQVKERIKHFAAKGAFDIDGLGDKLVDQLVDRGMIASYADL 481 Query: 452 LLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERS 508 L E L++ + + L +R F ++ +G+ A L A Sbjct: 482 FTLRVEDLESLDRMGFKSAQNLVAAIEKSRHITFDAFLYGLGMRHVGAHVATLLARAFPG 541 Query: 509 WSQLLFSTEQ-FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 QL + + G G A V + N + ++ L + Sbjct: 542 IDQLAEAALAGQLNSIDGIGGVIAESVKNFFSNPENRQTVDSLINHGV 589 >UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XGZ1_9BACT Length = 680 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 113/592 (19%), Positives = 221/592 (37%), Gaps = 60/592 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A+ ++L ++I+ D+ Y+ E K + D YD+L L ++ F S Sbjct: 1 MTHNEAKTRHTQLVEEIRGHDNAYYVEAKPTISDQAYDRLYHELLDLEKKFPDLITSDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGV 128 + V PL V H + + + ++ E + ++PKVDGV Sbjct: 61 SQRVSGEPLKEFKPVHHLSPMMSLDNTYSQQDVRDFVGRVQRLLPNETLEWILEPKVDGV 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP----LANSTLQGEIFLQ 184 A+ L Y G +RG+G G+D T + I ++ + ++GE++L Sbjct: 121 AINLKYEKGVFVCGATRGDGTTGDDVTSNLKTIRSIAGKLKASGRKLPDVVEIRGEVYLP 180 Query: 185 REGHIQQ--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DGPQ 230 + + + N R AG + + D L V V+ + P+ Sbjct: 181 KAAFTKINAERVAAGEEPFANPRNSAAGSLKQLDPRIVAKRPLDVIVYGLGVFEGAERPK 240 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP- 287 + L L +AG + + +ADE+ NE + + + TDG V++ Sbjct: 241 EHDEVLAWLKSAGCKTPEKTWKCC-SADELIDAINELDQLRRKFTYETDGAVIKLNSFAL 299 Query: 288 -ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 E + W +A+KY ++KAI VG++G ++ VA L PV L + R Sbjct: 300 RERIGFTSKAPRWAIAYKYAAEQAETKLKAITIQVGRTGALTPVAELEPVFLAGSTISRA 359 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----- 399 + + + DI GD + + AG+ IP + VV R + + P + Sbjct: 360 TLHNEDELRRKDIRVGDTVTIEKAGEVIPAVVGVVLTKRTGKEVQFQFPTHCPECGSKVA 419 Query: 400 -----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 + + C Q R+ A+ + ++G GEA L + Sbjct: 420 RTEGTENGAAGVVWRCLNAACPAQIRGRIEHWCARGAMDIEGGGEALVSQLVTKGLVREV 479 Query: 449 FSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNA---SD 505 LT +Q+ + + + ++ + R + +GI A + Sbjct: 480 SDLYSLTLDQVAGLERMGEKSAQNFLDGVQASKTRDMWRLLFGLGILHVGAGVAKRLGRR 539 Query: 506 ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + + ++++ ++ G A +++W + + ++L L + Sbjct: 540 FTTLDDIFAASQEQLTEVEDIGEVIAHSIVQWHQEPKNRELIELLRKAGLNF 591 >UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=DNLJ_THEYD Length = 670 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 134/585 (22%), Positives = 227/585 (38%), Gaps = 52/585 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRD 81 P ++EI +L +++ + Y+ + D YD + RL + + +G S + Sbjct: 5 PEDIKKEIEKLVKELNYHNYRYYVLDSPVISDEEYDMMLRRLKELEEKWGYILPDSPTQR 64 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR---------ERSDLWVQPKVDGVAV 130 V P H + L + E + V+PK DG+AV Sbjct: 65 VGAAPSEKFEKAEHREPMLSLDNAFSIEELRDFDARVKRLLGSSEEVEYTVEPKYDGLAV 124 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG---PLANSTLQGEIFLQREG 187 L Y+DG L KA +RG+G GED TQ + I A+P + G ++GE++L + Sbjct: 125 ELSYKDGLLYKASTRGDGYVGEDITQNIKTIKAIPLRIEGVDKIPEEIDIRGEVYLNIDE 184 Query: 188 HIQQQMG--------GINARAKVAGLMMRQDDSDTLNSL---GVFVWAWPDGPQLMS--D 234 + N R +G + + D S T + + + G + S + Sbjct: 185 FERINKERIEKGEPVFANPRNAASGSVRQLDPSITASRRLYMSCYGIGYVKGIEFKSQIE 244 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHW 292 ++ L F + Y + K +EV E + PF TDG VV+ R Sbjct: 245 FIEWLKKGRFPV-PAYVKLAKGIEEVIEAIKEIEKLRQGYPFETDGAVVKVNSFELQRKL 303 Query: 293 LPGQ--AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 W +A+KY + ++K I +VG++G I+ VA L PV + V R + + Sbjct: 304 GTKTREPRWAIAYKYPAHQGITKLKDILASVGRTGVITPVAVLEPVKIGGVTVSRSTLHN 363 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS--------- 399 + DI GD ++V AG+ IP I VV R E + PE+ Sbjct: 364 WDEVERKDIRVGDYVIVERAGEVIPHIIGVVKDRRTGEEKEVKIPEHCPVCGSKTVREPG 423 Query: 400 -LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 + + C Q R+ +++ + ++G+G+ LH +H L E Sbjct: 424 EVAVKCINFNCPAQVEERIKHFASRRAMNIEGLGDKTVELLHNKGIIKHFVDLYKLRQED 483 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRA---ALNASDERSWSQLLFS 515 ++ PG A+ S +L ++K +R + A+GI L A R L Sbjct: 484 IKGLPGFAELSSKKLIEAIAKSKKTTLSRLLYALGISQVGEYASKLLAQHFRKLEDLYHI 543 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + Q+P G A+ + ++ N + K L + P Sbjct: 544 KAEKLVQIPQIGEKTAKTIEQFFNNEENLKAIEELKRMGLKVENP 588 >UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB Length = 794 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 120/604 (19%), Positives = 225/604 (37%), Gaps = 75/604 (12%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 A E I++L+ ++ + Y+ + + D YD+L L + + S Sbjct: 2 TDTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDSP 61 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRE-------------------RS 117 + V P + G V H + + ++ L + R Sbjct: 62 TQRVSGTPASAFGEVRHEIPMLSLGNAFEEQDLLDFDRRVREGLADLLPGGDLLGGGAEV 121 Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANS 175 + +PK+DG+AV+L+Y G+L + +RG+G GED T V I VP + G Sbjct: 122 EYSCEPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLHGEGWPEIL 181 Query: 176 TLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP 226 ++GE+F+ + G N R AG + + D T L + + Sbjct: 182 EVRGEVFMSKAGFEALNAKAVETGGKTFANPRNAAAGSLRQLDSKITASRPLEFCAYGFG 241 Query: 227 DG----PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGVV 280 P L+ G +++ R VK A ++ + L + DGVV Sbjct: 242 QVSGTLPDTQVGILEAFRGWGIPISREL-RLVKGAQACRDYYDDIGRRRDALAYEIDGVV 300 Query: 281 VRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVML 338 + + R + + W +A K+ ++ E+ ++F VG++G ++ VA L PV + Sbjct: 301 FKVNRIAFQRELGFRAREPRWAIAHKFPAREELTELLGVEFQVGRTGAVTPVARLKPVQV 360 Query: 339 DDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENR 396 V + ++ + GD +++ AG IP++ VV R A+ PE+ Sbjct: 361 AGVTVSNATLHNMDEVARLGLRIGDTVVIRRAGDVIPQVMQVVLERRPADAQAIEVPEHC 420 Query: 397 FNS-----------------------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGE 433 + CQ Q ++ +++ + +DG+G+ Sbjct: 421 PVCGSAVERTQLVKRSKGKESISEGAIYRCVGRLSCQAQLKQAIIHFVSRRAMDIDGLGD 480 Query: 434 AGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMG 493 L LT EQ+ G A+ + L +RK R++ A+G Sbjct: 481 KIVEQLVDRGLVASPADLYTLTYEQVFELEGFAELSTNNLLAAIADSRKPSLARFIFALG 540 Query: 494 IPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWL 550 IP A L A S ++ + + LP G+ A ++ + + +++ + L Sbjct: 541 IPDVGEETAKLLARSLGSLERIGKALPEVLTYLPDVGAEVAYEIHNFFADEHNRQVIAQL 600 Query: 551 AAQQ 554 + Sbjct: 601 RDAE 604 Score = 43.3 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 3/73 (4%) Query: 484 PFTRWVMAMGIPL---TRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN 540 ++ + IP T A AS S ++ + +Q+ A+ + ++ + Sbjct: 624 SLAGFIDKLNIPFIAATGAEKLASRFGSLDGIIRADWLDLRQVERLPERAAKSLRDFFDE 683 Query: 541 AQIKKLGSWLAAQ 553 + + AQ Sbjct: 684 PANVQRALAIEAQ 696 >UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus RepID=DNLJ_BDEBA Length = 684 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 117/603 (19%), Positives = 219/603 (36%), Gaps = 62/603 (10%) Query: 20 AVCPAWSPAR------AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR 73 A C W+ +++ L++ I + D +Y K + D YDQL A L ++ Sbjct: 4 AFCRDWTSEMGANYSMSKKRHEELKKIISEHDHNYHVLDKPTITDYEYDQLFAELLDIEK 63 Query: 74 ------CFGSEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER--------- 116 S + V L G H + + + + Sbjct: 64 NPKGLDLSDSPSQRVGGTVLEGFTKAQHRLPMLSLANSYSPEDIFEFDERVRKFLNTEDP 123 Query: 117 SDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLAN 174 + + K DG+++ L+Y +G+L +AI+RG+G GED T + I ++P + P Sbjct: 124 VEYLCELKFDGLSMELIYENGQLVRAITRGDGTVGEDVTHNIKTIKSIPLKLSHKNPPPL 183 Query: 175 STLQGEIFLQREGHIQQ--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAW 225 ++GE+ + +E + Q N R AG + + D L F +A Sbjct: 184 LEVRGEVLMFKEDFARLNETQQENGQQTFANPRNAAAGTVRQLDSRIAASRPLRFFGYAL 243 Query: 226 P----DGPQLMSDRLKELATAGFTLTQTYTR----AVKNADEVARVRNEWW--KAELPFV 275 + + + G Y K +EV + + + +LPF Sbjct: 244 GAVEGETFNTQKNIQEYFNDHGIPTVLPYKEDLLVVAKGPEEVVKYYHHIEKVRPKLPFD 303 Query: 276 TDGVVVRAAKE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DGVV++ E + W A K++P V+ I VG++G ++ VA + Sbjct: 304 IDGVVIKVNSLRLQEDLGLVARSPRWATAAKFKPEQAQTTVEDIVVQVGRTGALTPVAIM 363 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV---WRGAERTKP 390 PV + V + + DI GD +++ AG IP + +VV R A+R Sbjct: 364 KPVKVGGVTVTNATLHNQDEITRKDIRIGDTVIIQRAGDVIPEVVEVVNPDKRPADRLPY 423 Query: 391 TPPENRFNS----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALH 440 + PE + + +C L A++ + +D +G+ L Sbjct: 424 SIPERCPACDSVAVKAEGEVVTRCVNPLCIAVVKESLKHFVARRAMNIDKVGDRLIETLV 483 Query: 441 QTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA 500 + LT EQ+ + + + ++ R++ A+GI Sbjct: 484 DNKLLTRFSDFYRLTKEQILSLERQGDKSADNIIKSIENSKNPTLARFIFALGIRFVGEQ 543 Query: 501 L---NASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 A + + L ++E+ Q+P G+ A+ + +W N ++ + + Sbjct: 544 TGKHLADHFLTIDKFLEASEEELLQVPEIGAKVAKSIRDWTGNPKLVDEVKAMIELGVKI 603 Query: 558 FEP 560 P Sbjct: 604 AGP 606 >UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHM5_9BACT Length = 667 Score = 586 bits (1510), Expect = e-166, Method: Composition-based stats. Identities = 115/587 (19%), Positives = 229/587 (39%), Gaps = 56/587 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + + I RL+ +I+ + Y+ K E+ D YD L L + + + S Sbjct: 1 MNKNELKARIDRLRAEIEHHNRLYYTLAKPEISDYEYDMLVKELQELEAQYAEGAVEESP 60 Query: 79 PRDVMMP--PLNGAVMHPVAHTGVRKMVDKNALSLWMRER-------SDLWVQPKVDGVA 129 + V P + H V + + ++ S+ + K+DG + Sbjct: 61 TQKVGSDLTPGAKTIPHKVRMASLENAYSLEEVLAFINRTNNDLGYASEYCAELKIDGFS 120 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 + L Y +G A +RG+GL+GED T+ L+ VP T+ ++GEI++ + + Sbjct: 121 INLYYENGNFIYATTRGDGLEGEDVTENFRLLPDVPFTIDYK-GAIEIRGEIYIPVQDFL 179 Query: 190 --------QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP----------DGPQ 230 + N R AG + + + L +A + Sbjct: 180 ALNEFRRENELKTFANPRNAAAGSIKLKSREEVKSRHLKALFYALGYYETPLQYKNEIID 239 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARV--RNEWWKAELPFVTDGVVVRAAKEPE 288 + L L GF ++ K+ E + + E + +P+ DG+V++ + Sbjct: 240 KQTRLLDFLDELGFPTSKRT--LCKHYQEAEKFCLQMEQERYTIPYDIDGIVIKVNSLED 297 Query: 289 SR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 + W +W +A+K++P + ++++ F VG++G ++ VA+L PV + V Sbjct: 298 QKKLGWTAKSPKWAIAYKFKPEEKETVLESVSFQVGRTGAVTPVANLKPVFISGSTVSHA 357 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKPT-----------PPE 394 + + + D+ GD +LV +G+ IP+I V V + KP P + Sbjct: 358 TLHNADEIKRLDLHYGDTVLVVKSGEIIPKILSVNVSKRPVNAKPVIFPATCPVCNAPLQ 417 Query: 395 NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 + Y + C Q +L +++ + + G+G + L +T + + I L Sbjct: 418 RDEDGSINYCPNANCPAQIQRKLEHFASREAMDIYGLGSSLIARLIETGQIKWIPDIYHL 477 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 ++ + K + L ++ + F R + A+GI A A ++ Sbjct: 478 DYNKIAEMERMGKKSADNLQKAIEASKTKNFDRVLFALGIRHIGSITARTLAQHFKNIDA 537 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 L+ + E+ +P GS AR +I + ++L L + Sbjct: 538 LIMAKEEELLSVPDIGSIIARSIIGFFSQKSNRELIDSLRKVGLQFT 584 >UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9NEIS Length = 797 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 128/603 (21%), Positives = 225/603 (37%), Gaps = 78/603 (12%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 P +AQ++I L Q+ Q+ +Y+ V D YD+L L + + S Sbjct: 20 PQQAQQKIQTLTAQLNQYAHEYYTLDAPTVPDSEYDRLYRELEALETEYPQFRLPESPTN 79 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMV----------DKNALSLWMRE--------RSDLW 120 V L+G V+H V + D + + ++ Sbjct: 80 RVGGAVLDGFETVIHAVPMLSLANAFSPRDDEAGTFDHAEMRAFDERVCKDLGAAHTEYI 139 Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQ 178 ++PK DG+A++L+Y++G L +A +RG+G GED T+ + + +P + G ++ Sbjct: 140 IEPKFDGLAISLLYQNGILIQAATRGDGTTGEDVTENIKTVRNIPLRLHGDEVPDLIEVR 199 Query: 179 GEIFLQREGHIQQ--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD-- 227 GE+ + + Q N R AG + + + + T L F + Sbjct: 200 GEVLMLKADFAALNARQLDAGQKPFANPRNAAAGSLRQLNSAITAQRKLHFFGYGIARLS 259 Query: 228 ----GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVV 281 P+ + ++ LA GF+ Q R N EV + +LP+ DG+VV Sbjct: 260 TAFRQPENHAQEIELLARLGFSEPQAQIRVCANIQEVLDFYETMAQQRPQLPYEIDGMVV 319 Query: 282 RAAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 + + + ++ W +A K+ + V+AI VG++G I+ VA L PV + Sbjct: 320 KVNDLRQQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGSITPVARLKPVFVG 379 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRG---------AERTKP 390 V + + D+ GD ++V AG IP + VV ER +P Sbjct: 380 GVTVTNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVVLERRPMRNVDLLGERQEP 439 Query: 391 TPPENRFN--SLTC--------------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEA 434 P R C VC+ Q L+ +++ + + G+G+ Sbjct: 440 QHPAFRLPETCPVCGSAVEREIGEAVARCTGGIVCKAQRAQGLIHFASRKAMDIVGLGDK 499 Query: 435 GWRALHQTHRFEHIFSWLLLTPEQLQNTPGIA---KSKSAQLWHQFNLARKQPFTRWVMA 491 AL + L +LQ + + +R+ P R++ A Sbjct: 500 QIEALVEQDVLHSFADIYQLDIAKLQTIKDSKSGANKWTHNILDAVAASRQPPLARFLFA 559 Query: 492 MGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGS 548 +GI A A+ W + + E LP GS A + + + +KL Sbjct: 560 LGIRHVGESTAKQLAAAFGDWDTVRRAPEPVLACLPDIGSVVAHSIAHFFRLPEQQKLLD 619 Query: 549 WLA 551 L Sbjct: 620 DLL 622 >UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID=DNLJ_CYAP4 Length = 738 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 125/635 (19%), Positives = 223/635 (35%), Gaps = 103/635 (16%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 A + ++ + L+Q +++ Y+ +ED VYDQL L + + S Sbjct: 14 AAATTEIRQRVLELRQLVQRASYAYYVLDAPILEDVVYDQLYRELQDLETQYPELLTPDS 73 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE----------------RSDL 119 + V P +V H + + + W + Sbjct: 74 PTQRVGEQPATQFVSVQHRIPLYSLENAFAVADMQAWQDRWQRQGQAIGEQSATLRSPEY 133 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTL 177 + K+DG A+ L Y +G L + +RG+G+ GED T V I ++P + P + Sbjct: 134 VCELKIDGSALALTYENGVLVRGATRGDGVYGEDITANVRTIRSIPLRLDWPDPPPIVEV 193 Query: 178 QGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW--- 225 +GE FL + + N R AG + + D L F + Sbjct: 194 RGEAFLPLDVFHRLNQEREQAGESLFANPRNAAAGTLRQLDARIVAKRRLDFFAYTLHLP 253 Query: 226 ---------------------------------------------PDGPQLMSDRLKELA 240 PQ L+ L Sbjct: 254 LASARSATQPAAAQQLDLLAVAQSDPAVAAQQLDLSSASQAESVTTHLPQTQWQSLELLQ 313 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE--PESRHWLPGQ 296 GF + + + +V + + W + +LP++TDGVVV+ E + Sbjct: 314 QIGFRVNP-HRQLCPTLADVRQYYDHWNHGRLDLPYMTDGVVVKLNSLRLQEHLGFTQKF 372 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +AWKY+P V EV I VG++G ++ VA L PV L V R + + R E Sbjct: 373 PRWAIAWKYEPEQAVTEVLNISVNVGRTGALTPVAELRPVQLAGTTVSRATLHNRDRLAE 432 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TKPTPPENRFNSLTCY-------F 404 D+ GD++++ AG+ IP I V PT + Sbjct: 433 LDLHIGDKVVIHKAGEIIPEILQVFPELRPADARPYQLPTHCPECGQPVVQPVDEAVTRC 492 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 + C +V + + +DG+GE R L + LT QL Sbjct: 493 LNVSCPAIVRGAIVHWVGRDAMDIDGVGEKLVRQLVDRGLVNSVADLYRLTVAQLLTLER 552 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 + + ++ ++ +P++R + +GI A + + S +L+ ++ + + Sbjct: 553 MGNKLAEKVVAAIAKSQSRPWSRVLYGLGIRHVGSVNAQVLTTAFPSVERLMAASAEDIE 612 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 + G G A+ +++W + L L+A + Sbjct: 613 AVHGIGPEIAQSIVQWFQTPANHSLIEQLSAAGVQ 647 >UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3B8_9BACT Length = 681 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 126/579 (21%), Positives = 237/579 (40%), Gaps = 53/579 (9%) Query: 31 QEEISR---LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 +E++ R L ++ + Y+ E+ED YD L + Q++R S + Sbjct: 6 REKLDRYYWLVDELNRHGRLYYVLDAPEIEDDEYDALMREMLQFEREHPDLIRDDSPSKR 65 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVT 131 V L+ V H + + KN L W++ ++ + K+DG+AV+ Sbjct: 66 VGGAVLDAFEKVTHAKPMLSLEDVFSKNELHDWLQRAAEGVGQPWIPWCCELKIDGLAVS 125 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGHIQ 190 L++ DGK +A +RG+G+ GED T+ + + +P + G + L+GE+++ ++G Q Sbjct: 126 LIFEDGKFVQASTRGDGVVGEDVTENLKTVKDLPLRLLGDVPGHLELRGEVYMGKDGFAQ 185 Query: 191 QQMG--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQLMSDRLK 237 N R AG + + D S L +F + D G S+ L+ Sbjct: 186 LNAAREEAGLPLFANPRNAAAGSLRQLDTSVAAKRNLRLFTYYVQDAESYGLHSQSEILE 245 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPE--SRHWL 293 L G + + + RA + E W + LP+ TDG V +A Sbjct: 246 WLKARGLPVQKAWRRA-ETETEALDFLERWSGERFSLPYATDGAVFKADATEYWTVLGNN 304 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W VA+KY P + ++++I+ ++G++G ++ VA+L PV+L V+R ++ + Sbjct: 305 VKTPRWAVAYKYPPEERKTKLESIEISLGRTGVLTPVANLEPVLLSGTVVKRASLHNDEE 364 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDV---VWRGAERTKPTPPENRF---------NSLT 401 Q DI GD++ V AG+ IP I V G E P + Sbjct: 365 IQRKDIRVGDRVWVRKAGEIIPEIVRVDVASRTGTEEPFAMPATCPVCGAAVAKLPGEVA 424 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 + C Q L+ ++Q + + G+G+ L ++ ++ L E L Sbjct: 425 LRCLNRSCPAQLTQGLIHFASRQGMNIQGLGDRLAEQLVRSGLVKNFSDLYALRVEPLVR 484 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQ 518 + + + +L ++++P + A+GI A + A S ++ + E+ Sbjct: 485 LDRMGEKSAGKLLQAIAKSKERPLKFLITALGIREVGAGVAAELAKRFSSLDEIAAADEE 544 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + G G A + + ++L L ++ Sbjct: 545 RLAAVEGVGPVIAGSIKTFFGEEHNRRLIDGLREAGVSM 583 >UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DNLJ_DESAH Length = 685 Score = 584 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 120/595 (20%), Positives = 220/595 (36%), Gaps = 64/595 (10%) Query: 21 VCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG---- 76 + P+ S R ++E L++Q+ + +Y + + DG YD++ RL + F Sbjct: 2 IDPSSSFDRIKKEARLLREQLHVHNINYHVKDDPVISDGEYDRMMQRLIAIETQFPELST 61 Query: 77 --SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPK 124 S R + L H + + + + + V+PK Sbjct: 62 PDSPTRRIGAKALTAFETAEHAIPMQSLDNAFSDQDVIDFHNRTAKILNTSDIRYTVEPK 121 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQG 179 +DGVAV L Y G L A++RG+G GE T I +VP ++ ++G Sbjct: 122 LDGVAVELRYEQGSLTLALTRGDGTMGEVITDNARTIPSVPLKLAPAGNGTIPDVLEVRG 181 Query: 180 EIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ 230 E+ + + N R AG + + D T L +FV+ + Sbjct: 182 EVIINSKDFEGLNKKRLATGEPLFANPRNAAAGSLRQLDSRVTAKRPLEIFVYGVGRAQE 241 Query: 231 L--------MSDRLKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVV 281 L S L+ L GF + + + + R + E + +L + DG+V+ Sbjct: 242 LMANFDIGSHSALLESLKRLGFRINPLIRSGLSLTEVLDRFKAFETMRQDLDYEIDGMVI 301 Query: 282 RAAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 + E W +A+K+ + + + I VG++G ++ VA L PV + Sbjct: 302 KVDDIVFQERLGTKARSPRWAIAYKFPAMEETTVINDIIVQVGRTGTLTPVAILEPVNIG 361 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAERTKPTPPENR 396 V R ++ + Q DI D +LV AG IP++ V G+ER P Sbjct: 362 GVMVARASLHNQDEIQNKDIRINDTVLVKRAGDVIPKVVKPVTALRTGSERVFVMPT--- 418 Query: 397 FNSLTCY-------------FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH 443 + C+ + C+ Q RL +K ++G+G L Sbjct: 419 -HCPVCHSPVRRLDNEAAVKCINASCKAQLKQRLKHFVSKGGFDMEGLGTKLIDQLVDRT 477 Query: 444 RFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AA 500 L E L + + + + +++ P R++ A+G+ T A Sbjct: 478 LVGSFADLFTLDRETLAAMDRMGEKSATNIVQAIERSKRIPLKRFLFALGMAHTGESAAQ 537 Query: 501 LNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 L +S + LL ++ + + G G A V+ + N ++ + + + Sbjct: 538 LLSSTFFTLEALLKASAEALGAIEGVGPKTADSVVAFFANPDNQETIARMMENGV 592 >UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL Length = 673 Score = 583 bits (1504), Expect = e-165, Method: Composition-based stats. Identities = 112/583 (19%), Positives = 227/583 (38%), Gaps = 57/583 (9%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 ++ L+++++ + Y+ E+ D YD + L + S + V Sbjct: 8 AKQAEDLREKLRYHEHRYYVLDDPEISDADYDVMMNELKALEAKHPELLTPDSPTQRVGG 67 Query: 85 PPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLW--------VQPKVDGVAVTLVY 134 P G V H + ++ L W R +L + K+DG+++ L Y Sbjct: 68 KPREGFVKVAHSAPMLSLDNAYNEEELRDWARRVEELSGKAEIEYECELKLDGLSMALRY 127 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-------LANSTLQGEIFLQREG 187 +D + A++RG+G GED T + + +VP VS L + ++GE+ + Sbjct: 128 QDARFVLAVTRGDGSIGEDVTLNLRTVKSVPLGVSSATLKKTHMLGDFEVRGEVIFPTKS 187 Query: 188 HIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQLM----SD 234 + N R AG + + + T L + + ++ S+ Sbjct: 188 FEKMNEDREKQGLAKFANPRNAAAGAVRVLEPNITAQRRLDFYAYFLLVDGRVHIDRQSE 247 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEP--ESR 290 L L GF + K+ D+V + + E + +LP+ DGVV++ + Sbjct: 248 ALDTLEKLGFKVNSN-RAVFKSIDDVLKFIHKKEEDREKLPYEIDGVVIKVNSTALWQRL 306 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 + W +A+KY A V +V+ I VG++GK++ VA+L PV + V R + + Sbjct: 307 GFTGKAPRWAIAYKYAARAAVTQVEDILVQVGRTGKLTPVAALKPVPIGGTTVSRATLHN 366 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-------RGAERTKPTPPENRFNSLTC- 402 + + GD + V G IP++ V+ + + PE + + Sbjct: 367 MDEIDRLGLLIGDWVQVERGGDVIPKVVKVIDDKDHPRGKKKFKMPERCPECGGHVVRTE 426 Query: 403 -----YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 + C + ++ ++ V+ ++G+G++ L +++ L E Sbjct: 427 GEADHRCVNANCPAKLRESILHFASRGVMNIEGMGDSLVNQLVDRGLVKNVADIYELDEE 486 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLF 514 +L + + K + + + +K P R + +GI + A A S ++ Sbjct: 487 KLLSLERMGKKSAQNILDEIKGTKKLPLERVIYGLGIRMVGERTAQFLAEHFGSLDGVMK 546 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 +TE+ ++ G A+ + E+ ++L L A + Sbjct: 547 ATEEELLEVEEVGPRIAQSIHEFFAEPSNRELVKRLEAAGLQF 589 >UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP Length = 656 Score = 583 bits (1504), Expect = e-165, Method: Composition-based stats. Identities = 121/577 (20%), Positives = 234/577 (40%), Gaps = 46/577 (7%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 + ++EI L+ +I ++ Y+ +E+ D YD L ARL + S + Sbjct: 2 DKIKKEIEDLRSKINYHNNLYYNLDNAEISDAEYDGLYARLKFLEAMNPDYADAASPTQK 61 Query: 82 VM--MPPLNGAVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGVAVT 131 + + +V H + + W ++ + K+DGV+ + Sbjct: 62 IGGAASRVFTSVTHASQMMSLDNTYSSEEVLRWHERCVKSLGHGNFEMVAEAKIDGVSCS 121 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG---- 187 L Y G L A +RG+G GED T + I +P +S ++GEI++++ Sbjct: 122 LTYEGGVLTVAATRGDGKTGEDVTANIKTIKTIPHNISFKNK-IEIRGEIYIEKADLKRL 180 Query: 188 -HIQQQMG---GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG---PQLMSDRLKEL 239 IQ+ G N R AG + +++ + L F ++ G + ++ + Sbjct: 181 NEIQENEGENIFANTRNAAAGSIRQKNAEISASRPLKFFAHSFGYGDVDVKGFAEFMDLC 240 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPESR--HWLPG 295 + GF++T R + +E+ E +A LP+ DG+VV+ E + Sbjct: 241 KSWGFSVTPNRIRTA-DINEITSFYKRFEELRAGLPYDVDGIVVKINSFAEQKILGVTAK 299 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A+KY+P V I F+VG++G I+ VA L PV + + + + + Sbjct: 300 SPRWAIAFKYKPPQGKTVVNKIIFSVGRTGIITPVAELEPVAVAGVIISNATLHNFDEIK 359 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRG------AERTKPTPPENRF---NSLTCYFAS 406 + GD ++V AG+ IP+I +VV G A + P+ + + + + Sbjct: 360 RLGVKEGDTVIVERAGEVIPKILNVVKDGGGNEVKAPKNCPSCGSKVYRYEDEVAIRCIN 419 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIA 466 C Q L+ ++ + +DG GEA + + + L EQL Sbjct: 420 PACPAQIKGHLLHFVSRAAMDIDGFGEAVVEQVVEKKYVKDFADIYNLKAEQLLTLDLFK 479 Query: 467 KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFSTEQFWQQL 523 K L ++K+ +R + A GI + A+ +L ++ + +Q++ Sbjct: 480 DKKVNNLLLAVEASKKRSLSRVLYAFGIRHVGQKTGEILANHFEDIENMLAASLEDFQKI 539 Query: 524 PGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 G + V ++ ++A+ K+ + L + +P Sbjct: 540 NEIGPVVGQSVYDFMQSAKGKEEIARLKTAGVNFTQP 576 >UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNLJ_DICNV Length = 678 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 120/584 (20%), Positives = 234/584 (40%), Gaps = 52/584 (8%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE-PRDV 82 A + + E+ L+Q I+ + Y+ + D +D L +L + G P D Sbjct: 2 AQNSSLIAAELEALRQTIRAHEYAYYVLEAPNIADSEFDALMQKLRALEAASGLPIPADS 61 Query: 83 MMPPLNGA-------VMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVD 126 + G V H +A + + + + + + R + L +PK D Sbjct: 62 PTQRVGGKADNRFRNVAHHIAMLSLDNVFNADEFADFYRRLQEQLSPTTAISLIAEPKFD 121 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQGEIFLQ 184 G+A+ L Y +G L +A +RG+G+ GED TQ V IS +P ++ P ++GEI++ Sbjct: 122 GLAINLRYENGILQRASTRGDGITGEDVTQNVRTISTIPLRLNTHTPPDVIEIRGEIYMP 181 Query: 185 REGH--------IQQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG-----PQ 230 ++ + N R +G + + D T L F + + + P+ Sbjct: 182 KKAFYALNEQAAANGEKIFANPRNAASGSLRQLDPRITARRQLAFFAYGYGEITNYQLPE 241 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW-WKAELPFVTDGVVVRAAKEPES 289 L++ + + +A + +A + + +LPF DGVV + + + Sbjct: 242 TYEALLEQYRAWHIPVCSLHQKAATLPEALAAYQQFAKQREQLPFDIDGVVFKVNRFADQ 301 Query: 290 R--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 + +L W +AWK+ + + ++AI+ VG++G ++ VA L PV + V+ + Sbjct: 302 QRAGFLARAPRWAIAWKFPALEKTTRIEAIELQVGRTGAVTPVARLQPVTIAGVVVRSAS 361 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPE----------- 394 + + R DI GD I + AG IP + VV R + PE Sbjct: 362 LHNAREIARKDIRVGDTIFIRRAGDVIPEVVSVVLEKRLPDAPVFAMPEHCPVCAAAIVQ 421 Query: 395 NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 N ++ C Q ++ L+ +++ L + G+GE + L L Sbjct: 422 NEDEAVARCSGGLHCPAQRVAALIHFASREALDIRGLGEKLIQQLVAQEFVRTPADLFCL 481 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 T + + P + K + + + A+K R++ A+GI A A+ + Sbjct: 482 TADDWASLPRMGKKSAHNVMTAIDAAKKTTLARFIYALGIRGVGSVNAQALAAHFGDLAA 541 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + + Q++ G G A + + + + + + + A + Sbjct: 542 FMAADRAALQEIEGIGDVVAADIEHFFADEDNRAVIAAIVAAGV 585 >UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwinia tasmaniensis RepID=B2VL61_ERWT9 Length = 561 Score = 581 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 241/552 (43%), Positives = 349/552 (63%), Gaps = 2/552 (0%) Query: 8 LIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSAR 67 ++ + S++ A CP WS +RA EIS LQ Q+++WDD Y++ G+S + D YD L + Sbjct: 5 ILAAWLFSSAIQAQCPVWSASRADAEISALQAQLEKWDDAYYRRGESPIPDEQYDTLHGK 64 Query: 68 LTQWQRCF-GSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVD 126 L QWQRCF + + +G V+HPV+H V+K+ DK AL+ WM RS LWVQPK+D Sbjct: 65 LRQWQRCFSPASDLRKPLLKTDGKVLHPVSHMRVKKLPDKTALTRWMARRSGLWVQPKID 124 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQRE 186 GVAV+L+YRDG+L + ISRG+G++GEDWT+K LI +P+ + + QGE++L+ Sbjct: 125 GVAVSLLYRDGQLEQMISRGDGVRGEDWTEKARLIPDIPKFIPHSMRVQVFQGELYLKMT 184 Query: 187 GHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTL 246 H Q GG NAR+ VAG +M + + L +G FVW WPDGP ++ RL E + GF Sbjct: 185 DHRQAINGGKNARSAVAGALMAKAPAPLLQQIGFFVWEWPDGPTSLAQRLTETRSLGFPD 244 Query: 247 TQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQ 306 +T V N DEV R W+ LPFVTDG+VV + WLP EW++AWKY Sbjct: 245 ISAWTHRVDNVDEVESWRERWFHQPLPFVTDGIVVHSIPTRRGSDWLPEFGEWVIAWKYA 304 Query: 307 PVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQIL 366 P AEV++++FA+G++G+++VV +L PV L DK++ RV++GS+ W++ D+ GDQ+ Sbjct: 305 PPEATAEVRSVEFAIGRTGRVNVVLNLLPVQLGDKRISRVSVGSIENWKQTDVIAGDQVS 364 Query: 367 VSLAGQGIPRIDDVVWRGAERTKPTPPE-NRFNSLTCYFASDVCQEQFISRLVWLGAKQV 425 +SLAG G PR+D V+WR AER P P+ +FNS++C+ + C++QF++RL WLG K V Sbjct: 365 ISLAGLGAPRLDKVLWRVAERAYPPQPDAAQFNSVSCFHLTPQCRQQFLARLEWLGGKSV 424 Query: 426 LGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPF 485 L L G G W+ L Q+ HIFSWL LT EQL+ PGI + ++ W QF L+R+ PF Sbjct: 425 LNLVGTGRQTWQQLIQSGSMVHIFSWLALTKEQLEAVPGIGEQRAQLFWQQFKLSRQLPF 484 Query: 486 TRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKK 545 RWV A+G+P+ ALN + +W L+ Q WQQLPG G A +++ + + ++++ Sbjct: 485 KRWVKALGVPIPEKALNTLTDDNWQPLVSRRLQEWQQLPGVGRKLAGKIVSFLQQREVRQ 544 Query: 546 LGSWLAAQQITG 557 L L IT Sbjct: 545 LIEGLEPPLITP 556 >UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR65_9FIRM Length = 669 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 109/583 (18%), Positives = 223/583 (38%), Gaps = 49/583 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVM 83 A ++ L+++++ Y+ K E+ D +D+L L ++ + D Sbjct: 1 MVTAEIIKKAEELRKKLRYHSYLYYVLDKPEITDFEFDRLYRSLVDLEKEYPEIVTPDSP 60 Query: 84 MPPLNGAVMHPV-------AHTGVRKMVDKNALSLWMRERS--------DLWVQPKVDGV 128 + G + L + R + + K+DG+ Sbjct: 61 TQRVGGKASDDFRKIPFKKPMLSLANAFSAEELRDFDRRVHGGIGAMPVEYITELKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 ++ L+Y +G L + ++RG+G GED T V I +P + A ++GE+++ R+ Sbjct: 121 SMNLIYENGSLMQGLTRGDGKVGEDVTSNVKTIKTIPLYIENAPAYMEVRGEVYMPRKSF 180 Query: 189 IQQQMG--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQL----MSDR 235 I N R AG + + D T L F +A L D Sbjct: 181 IALNEERDEAGMMPFANCRNAAAGSLRQLDPKVTAARNLDFFAYALGAEEGLDISSQDDL 240 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RH 291 L +L F + Y + + + V EW + EL + TDG+V++ + Sbjct: 241 LLQLKKFHFRVNPHYRKW-DSIEGVITGVREWEKKRRELDYDTDGMVIKVNDFRQQELLG 299 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 +W +A+KY P V +++ I ++G++G ++ A L PV L V+R + ++ Sbjct: 300 ATGKDPKWAIAYKYPPEEAVTKIEKIVVSMGRTGVLTPSADLTPVRLAGTTVKRATLHNL 359 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRG-----AERTKPTPPENRFNSLTCY--- 403 +E DI GD +++ AG+ IP I V+ E P NS+ Sbjct: 360 DFIREKDIREGDTVIIYKAGEIIPEIAAVLKEKRNGSEKEFEMPENCPVCGNSIRRIDTE 419 Query: 404 ----FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + C +L+ ++ + ++G+G A +L + L + L Sbjct: 420 AAFRCINPACGGVVREKLIHFASRDAMDIEGLGPAVVDSLLAYRLVADAADFYALKEDDL 479 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFST 516 + + + +A L ++++ + + +GI L A + ++ + Sbjct: 480 RQIERMGEKSAANLITAIRASKERGLAKLLFGLGIRFLGEKGSELAAHYFHTIDAIMAAD 539 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + ++ G G A+ + ++ + + ++ + L + E Sbjct: 540 VETIEETEGIGKITAKSLYDYFHDEKNIEMINKLKNAGVLMEE 582 >UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=DNLJ_ACIC5 Length = 677 Score = 579 bits (1493), Expect = e-164, Method: Composition-based stats. Identities = 127/596 (21%), Positives = 238/596 (39%), Gaps = 67/596 (11%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S A A ++I L++ I+ + Y+ + + E++D +D+L +L + + S Sbjct: 1 MSHASAAQQIESLRESIRHHEYLYYVQDQPEIDDLAFDELMRKLQRLEAEHPELITPDSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKVDG 127 + V P G V H + + + L W R + + K+DG Sbjct: 61 TQRVGGKPKEGFAKVAHSRPMLSLDNVNSEEELRDWERRVREQAGQNAEIEYVCEYKLDG 120 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-------LANSTLQGE 180 +++ L YRDG+L + ++RG+G GED T V I +VP +++ AN ++GE Sbjct: 121 LSMALHYRDGQLARGLTRGDGEIGEDVTTNVRTIRSVPLSIADGKLQQAKMPANFEVRGE 180 Query: 181 IFLQREGHIQQQMGGINARAK------------VAGLMMRQDDSDTL-NSLGVFVWAW-- 225 + + + R AG + + + L + + Sbjct: 181 VVMPFTAFEKLNEE----REAQGLAPAANPRNAAAGTIRTLEPNIVAQRRLDFYAYFALT 236 Query: 226 ---PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARV--RNEWWKAELPFVTDGVV 280 D + L LAT GF + Q + A K+ + V R E ++ L + DGVV Sbjct: 237 EKGEDAFGEQEEALDALATLGFRVNQ-HRHAAKSIETVVEFVNRAEEHRSRLGYEIDGVV 295 Query: 281 VRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVML 338 V+ R + W VA+K+ + V +V+ IQ VG++GK++ VA LAPV + Sbjct: 296 VKVNSAVLQRRLGYTGRAPRWAVAYKFAARSGVTQVEDIQVQVGRTGKLTPVAWLAPVQV 355 Query: 339 DDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV-----WRGAE--RTKPT 391 V R + + + + GD + + G IP++ +VV RG + Sbjct: 356 GGTTVTRATLHNADEIERLGLRIGDFVRIERGGDVIPKVVEVVDDAEHPRGTKHFHFPHA 415 Query: 392 PPENRFNSLTCY------FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRF 445 P + + C + L+ ++ V+ ++G+GEA L Sbjct: 416 CPACGSEVVRTPGEADYRCVNTDCPARLRESLLHFASRGVMNIEGMGEAIVMQLLGRGLV 475 Query: 446 EHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALN 502 + + LT EQL + + K + L + + +R+ P R + +GI A Sbjct: 476 KTVSDIYSLTEEQLVSLERMGKKSATALLGEIDKSRQAPLDRVLFGLGIRFVGERTAQAL 535 Query: 503 ASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 A + S L+ ++ + +++ G + + E+ + + + L L + Sbjct: 536 AEEYGSMDALMQASREELERVNDVGPRVSEAIREFFDEPRNRDLVERLREAGLRFT 591 >UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0P0_9DELT Length = 680 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 129/586 (22%), Positives = 233/586 (39%), Gaps = 54/586 (9%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 A + +A++ ++ L++QI+ + Y+ E+ D YD L L + + + S Sbjct: 8 AAAKEQARQRVAELREQIRYHNHRYYVLDDPEIPDAEYDALFRELQELEERYPGLAGADS 67 Query: 78 EPRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW---------VQPKVD 126 R V PL V H + + ++ +S ++ +PK+D Sbjct: 68 PSRQVGAEPLAQFAPVAHRLPMLSLENAFNEGEISDFLLRLGRFLHTDQVPALHAEPKLD 127 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----PLANSTLQGEIF 182 G+AV LVY DG +RG+G GE+ T ++ I+ +P+ + P A ++GE+ Sbjct: 128 GLAVELVYEDGLFTLGSTRGDGFTGENITANLATIATIPRRLKTGGNPPPARLEIRGEVC 187 Query: 183 LQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GP 229 L G + N R AG + + D + T L F + D Sbjct: 188 LSITGFKELNRRRGEAGESLFANPRNAAAGSLRQLDPAITADRPLEFFAYGAADSAALAV 247 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNAD-EVARVRN-EWWKAELPFVTDGVVVRAAKEP 287 + L++L G L + R + + +A R + + ++P+ DG+V++ Sbjct: 248 TTQAQLLEQLHAFGLQLIP-HGRVCPDLETALAHFRFLDEQRRQMPYEIDGMVLKVNDLA 306 Query: 288 ESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + W VA K+ V ++ ++F VG++G ++ VA L PV + V R Sbjct: 307 LQKRLGAKARSPRWAVAAKFAAVQAATKLIGVEFQVGRTGAVTPVAVLEPVKVGGVLVSR 366 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS---- 399 + + + D+ D +LV AG+ IP + V R + P N Sbjct: 367 ATLHNEDEIKRKDLRLHDTVLVQRAGEVIPEVVKPVADKRRGDEKPIQLPANCPECDHAL 426 Query: 400 ------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + C Q + L+ +K L +DG+G+ L QT I Sbjct: 427 IRKEGEAVRRCPNPQCPAQRLRSLIHFCSKAGLDIDGLGKKAVELLVQTGLVGDIPDIYR 486 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWS 510 L PEQL PG + +A++ A+ R + A+GI A + A S Sbjct: 487 LRPEQLAPLPGWGEKSAAKVCDAIAAAKSPKLARLLAALGIRHVGEVNAQVLARHFPSLE 546 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 L + E+ + ++ G GS A ++ + ++ + + L +T Sbjct: 547 ALQQAMEEDFLEVEGIGSQVAASLVTFFKDPTTTAMLAQLKELGLT 592 >UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_LACH4 Length = 668 Score = 577 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 125/578 (21%), Positives = 229/578 (39%), Gaps = 50/578 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMMPP 86 A++E + L+ ++ +W D Y+ + EVED VYDQ RL + ++ F D + Sbjct: 7 DEAKKEAASLRTKLDEWADAYYSKDAPEVEDNVYDQSYNRLLELEKAFPEIVTPDSITQR 66 Query: 87 LNG-------AVMHPVAHTGVRKMVDKNALSLWMRERSDLW-------VQPKVDGVAVTL 132 + G V HP+ + + K+ L + + L V+ K+DG++++L Sbjct: 67 VGGEIDSDFTKVNHPIPMLSMGDVFSKDELKEFDQRMQKLVGHPVEYNVELKIDGLSLSL 126 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 Y+DGKL +A +RGNG GED T I+ +PQ + PL ++GE ++ +E + Sbjct: 127 EYQDGKLVRASTRGNGYIGEDVTANARYIADIPQVLPEPLT-IEVRGECYMGKEAFAKLN 185 Query: 193 MG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ---LMSDRLKELA 240 N R AG + + D T L F++ W + P+ ++ + Sbjct: 186 QEREDEGLSVFANPRNAAAGSLRQLDPKVTKKRQLSTFIYTWVNPPREITSQHQAIERMH 245 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP--ESRHWLPGQ 296 GF +T R + N DEV +E+ + L + DG+V++ + Sbjct: 246 ELGFHTNET-GRKLANLDEVFDFIDEYTAKRNSLTYGIDGIVLKVDDLSLEQQLGNTVKV 304 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K+ P Q V+ I + VG++G ++ A + PV L V R ++ + E Sbjct: 305 PRWEIAYKFPPEEQETIVRDIVWTVGRTGVVTPTAVMDPVQLAGTTVARASLHNPDYLNE 364 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-------------Y 403 + GD + + AG IP I +VV P E +C Sbjct: 365 KGVRIGDTVKLHKAGDIIPEISEVVLSKRPAD-SVPYEIPTTCPSCGQKLVHLEDEVALR 423 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 + C Q ++ ++ + + G+G + L ++ LT + L Sbjct: 424 CINPSCPAQVEEGIIHFASRPAMNIAGLGPKIVKQLIAKDLVHNVADLYHLTEDDLAQLD 483 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFSTEQFW 520 + L + ++K + +GI A L A ++ +++ Q Sbjct: 484 HFKEKSINNLLTAIDNSKKNSVELLITGLGIDHVGAKAARLIAQKFKNLEKIMSLGVQDI 543 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 + G A + + + +KL L + Sbjct: 544 ASIDTIGMTTAESMTTYFAQPEAQKLIEELRESGLNMD 581 >UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7C8A9_9FIRM Length = 667 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 106/582 (18%), Positives = 221/582 (37%), Gaps = 52/582 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S + I L+++++++ +Y+ + D YD+L L + + S Sbjct: 1 MSMMDEKARILELRKELEKYSIEYYVYDNPSITDQEYDRLMQELMALEEKYPEMYDATSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAV 130 + ++ L+G V H + + +K + +++ + V+ K DG+A+ Sbjct: 61 SQRIIGSVLDGFEKVTHDTQMLSLSNVFNKEEIEEFVQRISESVSNPEFVVECKYDGLAM 120 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ 190 L+Y DG +A++RG+G+ GED + V I ++P + + + ++GE+++ + Q Sbjct: 121 ALLYDDGNFTRAVTRGDGIVGEDVSNNVKTILSIPMHIPE-MRHVEVRGEVYMPKASFEQ 179 Query: 191 QQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGP----QLMSDRLK 237 N R AG + + D S L + + + + Q + L+ Sbjct: 180 LNKRQEEKGLAPFANPRNAAAGSIRQLDSSICASRKLDAYWYYFQNASDFAVQTQEEALQ 239 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPESR--HWL 293 ++ F + +++ + E + +LP+ DG+V++ + R Sbjct: 240 AMSKMHFRTNP-LRKVCTTVEQIWQFIQEIQEKREDLPYEIDGMVIKLNNLADQRRLGST 298 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 + A+K+ + +K I VG++GKI+ A L PV + V + + Sbjct: 299 AKVPRYATAYKFPAQEVLTRLKDIVITVGRTGKITPNAVLEPVRVAGTTVSAAQLHNEDM 358 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC----------- 402 D+ GD ++V AG+ IP + V + T+ P + C Sbjct: 359 IVNKDLRIGDIVVVRKAGEIIPEVVTSVPERRDGTQ-VPYKFPTTCPICGSHLVRLPDEA 417 Query: 403 --YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQ 458 Y + C + + ++ ++ + +D +G+ LH+ I L ++ Sbjct: 418 AHYCINQDCPARVVESMIHFASRDAMNIDTLGDKKIEQLHEWGYLNSIEDIYFLDRYYDE 477 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 L PG K +L ++KQP + +GI A + A L+ + Sbjct: 478 LIEKPGYQKKSVDKLLESIEKSKKQPLGVILYGLGIRQVGKKAAMILAEQFGDIDTLMHA 537 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + G A V+ + + + L L Sbjct: 538 CVDELVLIHDIGLITASSVVAFFKEEKNLHLIDVLKQAGCNF 579 >UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriaceae RepID=C7NA81_LEPBD Length = 706 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 108/591 (18%), Positives = 242/591 (40%), Gaps = 63/591 (10%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPL 87 ++ QE+ +L+ +I+ ++ Y+ E + D YD L L Q ++ + + P Sbjct: 24 SKIQEKYKKLRNEIEYHNNLYYNEDNPIISDMEYDALMRELKQLEQEYPELLENSENSPT 83 Query: 88 N----------GAVMHPVAHTGVRKMVDKNALSLWMR-----------------ERSDLW 120 V H + + + + + + E + Sbjct: 84 KKIGGTASEKFSKVRHRTPMLSLSNTYNISEIEDFDKRVKKIILSQIDENKNNDENLEYI 143 Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGE 180 ++ K+DG++++L+Y +G+L +A++RG+G GED T+ + IS++P+ + P++ ++GE Sbjct: 144 LELKLDGLSISLIYENGELVQAVTRGDGQIGEDVTENIREISSIPKKLKDPVS-LEVRGE 202 Query: 181 IFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD---- 227 I L + N R +G + + D + L +++ + Sbjct: 203 IILPISNFNRINQEREDDGEDVFANPRNAASGTIRQLDKTIVADRGLDCYLYYLVNAENY 262 Query: 228 GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK 285 G + ++ + GF T + + + E+ + ++W + L + TDG+V++ Sbjct: 263 GINTHLESIEYIKNLGFQTTGVFEKY-TDFTELEKSIDKWHDKRKTLDYETDGLVIKVNN 321 Query: 286 EP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 E+ + W +A+K+ ++ + F VG++G I+ VA L V L V Sbjct: 322 FALYETLGYTTKSPRWAIAYKFPAEQVKTKLTDVTFQVGRTGVITPVAELEAVNLSGSVV 381 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS-- 399 +R ++ + + DI GD ++V A + IP++ +VV+ R + + P N Sbjct: 382 KRASLHNFDEIRRKDIKIGDNVIVEKAAEIIPQVVNVVFDDRTGKEIEIQEPTNCPVCNS 441 Query: 400 --------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 + + +C E+ ++ + ++ + + G+G+ + + + I Sbjct: 442 ELSHEEGLVALKCHNPLCPEKVKRQIAYFVSRDAMNISGLGDKIVEKFIELGKIKTIVDI 501 Query: 452 LLLTP--EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDE 506 L E+L+N + + L + ++ + F++ + A+GIP A L Sbjct: 502 YSLEKYREELENLEKMGQKSVDNLINSIESSKTRDFSKVLYALGIPFVGKFNANLLTKTF 561 Query: 507 RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 ++ L + + + G G A V + + K+ + L + Sbjct: 562 KNIENLKNQSIENLLAVKGIGDKVAVAVNTFLNDENNWKIITDLQNIGLQF 612 >UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT Length = 684 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 120/598 (20%), Positives = 232/598 (38%), Gaps = 73/598 (12%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN-- 88 +E+I L+ ++++ + +Y+ + D +D+ +L + E D P + Sbjct: 4 KEQIQSLRDELREHNYNYYVNDNPTISDFEFDKKLEQLKTLEAAHP-EFYDATSPSVRVG 62 Query: 89 -------GAVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVAVTLVY 134 + H + L W + + K DG +++L Y Sbjct: 63 GEVTKNFNTIKHINRMYSLDNSYSIEDLRDWEKRIKKIVDGEIQYTCELKYDGASISLHY 122 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQ 192 +GK +A++RG+G +G++ T V I +VP + G A ++GEI L +G + Sbjct: 123 ENGKFVQAVTRGDGNQGDEVTANVRTIKSVPLQLKGDDVPAKFEIRGEIVLPWDGFHKMN 182 Query: 193 MGGI--------NARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG---PQLMSDRLKELA 240 N R +G + QD ++ L ++ + D L Sbjct: 183 EERADQGLDLYRNPRNTASGSLKLQDSAEVAKRPLDCLLYQLAGENLPVKSQFDSLTLAR 242 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQ 296 GF Q ++ V + +EV N W + ELP+ TDGVV++ + + Sbjct: 243 KWGFKAPQE-SKLVHSIEEVFEFINHWDVARKELPYETDGVVIKVNSLDQQDELGFTAKA 301 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 +W +A+K+ ++ I + VG++G I+ VA+L PV + V+R ++ + + ++ Sbjct: 302 PKWAMAYKFAAEQVSTRLEEITYQVGRTGSITPVANLEPVEISGTTVRRASLHNADQIEK 361 Query: 357 WDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKPT-----PPENRFNSLTC------YF 404 DI GD++ V G+ IP+I V + + + + PT PE + Y Sbjct: 362 LDIRVGDEVYVEKGGEIIPKIVAVELTKRPDNSTPTVYATHCPECHTELVRTEGDAKHYC 421 Query: 405 ASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 +D C Q R+ +++ + +DGIG L + LT EQ+ Sbjct: 422 PNDMACPPQVKGRIEHFISRKAMDIDGIGAETVGQLVDAGFINNYADLYDLTVEQVLPLE 481 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE--- 517 +A+ + + + +++ PF R + +GI A A ++ LL Sbjct: 482 RMAQKSAENMINGIEASKQVPFERVLFGLGIRYVGETVAKKLAKHYKNVDALLNMPAEPD 541 Query: 518 ------------------QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + +P G A+ ++E+ +N + L + Sbjct: 542 KSSIDLFADVSSAADKKMEELTAVPEIGESIAQSLVEFIQNEDQMAIIERLKNTGLQF 599 >UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P5_9ACTN Length = 742 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 112/598 (18%), Positives = 222/598 (37%), Gaps = 78/598 (13%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE-PRDVMMPPLNGAV--- 91 L+ ++ Y+ E+ D +D++ L + + + D + G V Sbjct: 39 ELRHELDYHAYRYYMLDAPEITDAAFDKMLVELQEIEAAYPDLVTPDSYTQRVGGYVSEQ 98 Query: 92 ----MHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYRDGKL 139 H + +D + L W++ D + K+DG+ V L Y++G Sbjct: 99 FTPVTHMARMYSMDDAMDLDELDAWLQRTEDALGAGNVTYTCELKIDGLGVALTYQNGTF 158 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL---------ANSTLQGEIFLQREGHIQ 190 +A +RG+G GED + V I VP +S P ++GE+++ + ++ Sbjct: 159 VRAATRGDGTTGEDVSLNVRTIKDVPMHLSEPALTHMGADRERTIEVRGEVYMPKGSFVR 218 Query: 191 QQMG--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLM----SDRLK 237 N R AG + ++D T L F++A D L + L Sbjct: 219 LNEEADAEGRDPFANPRNAAAGSLRQKDPKVTARRDLATFIYAIADTDPLHVHSQREFLD 278 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEPESR--HWL 293 L +AGF++ R EV + + +L + DGVVV+ + + Sbjct: 279 WLRSAGFSVNPNVAR-CATPAEVHEFCAQALEHRGDLDYDIDGVVVKVDSFQQQLDLGFT 337 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W +A+K+ P + ++ I+ VG++G ++ VA PV + + R + ++ Sbjct: 338 ARAPRWAIAFKFPPEEKQTVLREIRIQVGRTGVLTPVAEFDPVTVAGSTIARATLHNIDE 397 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVV----------WRGAERTKPT--PPENRFNSLT 401 + ++ GD I+V AG IP + V W+ E P + + Sbjct: 398 IRRKNVREGDTIIVHKAGDVIPEVVGPVLDKRPADSVDWQMPEVCPVCGSPVVHEDGEVA 457 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 S C Q RL+ ++ + +DG+G+ + + + LT + + Sbjct: 458 YRCVSIDCPAQLKERLLHWVSRGCMDVDGLGDEIVDKMIAAGLIHDVADFYQLTVDDIAG 517 Query: 462 TPG--------------------IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL 501 + + ++ + N ++ QP R + A+GI ++ Sbjct: 518 LDTGRTYASSNSKKGVKKGDPIPVGLKTAEKIIVELNKSKSQPLGRVLFALGIRHVGKSV 577 Query: 502 N---ASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 A S +L+ ++E+ + G G A V ++ + + L ++ Sbjct: 578 GEVIAERFLSIDKLILASEEDIAECEGIGPKIAASVKQFLAVPENLAVLERLRQAGLS 635 >UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DNLJ_PSYA2 Length = 691 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 119/589 (20%), Positives = 227/589 (38%), Gaps = 59/589 (10%) Query: 23 PAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------ 76 P + ++ +KQ + Y+ +ED YDQL L + + + Sbjct: 18 PITNDDAIVTQMRTFIDTLKQHNYAYYVLDNPILEDSEYDQLRRSLLELEEEYPDLVQPD 77 Query: 77 SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD----------LWVQPK 124 S V PL V H + + + + N L +MR +D ++ K Sbjct: 78 SPINQVGDMPLPAFTQVTHDIPMLSLGNVFEYNDLRDFMRRVNDRLSVAQQSPEYEMELK 137 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQGEIF 182 +DG+AV+L Y GK +A++RG+G GED TQ I +P ++ + ++GE+ Sbjct: 138 LDGLAVSLKYVHGKFTQAVTRGDGQTGEDITQNAKTIRNMPLWLADAADIELLEVRGEVL 197 Query: 183 LQREGHIQ--------QQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWP------DG 228 + + G + ++ N R AG + + D S S + +A+ D Sbjct: 198 MPKAGFERLNRLAAEKEEKTFANPRNAAAGSLRQLDPS-VAASRPLAFYAYSVNQGLLDT 256 Query: 229 PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKE 286 S L + GF+++ V N E +A+LPF DG+V++ Sbjct: 257 IDTQSAALAWIKDIGFSVSA--VEVVSNPREAQTYYESIIATRADLPFEIDGMVIKVNSL 314 Query: 287 --PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 + +L + W A+K+ + + AI + VG++G+I+ V L PV + V Sbjct: 315 ALQQQLGFLSREPRWATAYKFPAETVMTRLHAIDWQVGRTGQITPVGKLEPVKVGGVTVS 374 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKP-----TPPEN--- 395 V + + Q D+ GD + V AG IP++ V + E ++P T P Sbjct: 375 NVTLHNFGEIQRLDVRAGDMVSVHRAGDVIPKVTRVWHEQRPENSEPVQLPSTCPVCDSP 434 Query: 396 ----RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 + +L C Q L+ +++ + +DG+G + + + + + Sbjct: 435 VVLPKDEALARCTGGLFCPAQQQEALIHFVSRRAMDIDGLGASWLISFFEHGLVKTVADI 494 Query: 452 LLL--TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDE 506 L E+L + + + ++ +R++ A+GI A A Sbjct: 495 YQLHNHQEELVTLEKLGEKSVQNIISAIEASKHTTLSRFIYALGIRGVGETTAQNLAQQF 554 Query: 507 RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 L+ ++ + P G+ A ++ ++ + L + Sbjct: 555 GDLDALMSASIEKLLLTPDVGAITAELAYKFFRAPHNIEVITALREAGV 603 >UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_EIKCO Length = 778 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 124/601 (20%), Positives = 216/601 (35%), Gaps = 78/601 (12%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 Q+ I L Q + ++ +Y+ V D YD+L L + S + V Sbjct: 5 QQRIRTLVQTLNRYAHEYYTLDAPSVPDAEYDRLYRELEALEAEHPQFRLPESPTQRVGG 64 Query: 85 PPLNG--AVMHPVAHTGVRKMV----------DKNALSLWMRE--------RSDLWVQPK 124 L+G V+H V + D + + + +PK Sbjct: 65 AVLDGFETVVHAVPMLSLNNAFSPRDDETGAFDHAEFLAFDERVCKELGVAQVEYAAEPK 124 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIF 182 DG+AV+L+Y++G L +A +RG+G GE+ T+ + + +P + G A ++GE+ Sbjct: 125 FDGLAVSLLYQNGILVQAATRGDGTTGENVTENIKTVRNIPLRLHGEKQPALLEVRGEVL 184 Query: 183 LQREGHIQQ--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG----- 228 + + Q N R AG + + D T L F + Sbjct: 185 MLKADFAALNQRQLEAGQKPFANPRNAAAGSLRQLDSKITAQRKLHFFAYGIAQLSGVER 244 Query: 229 -PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAK 285 P+ + L L GF+L + Y A A V R + LP+ DG+VV+ Sbjct: 245 LPESHMEELALLHEIGFSLPKGYFGAYTGAAAVLREYERLAEHRPRLPYEIDGMVVKVNS 304 Query: 286 --EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 E + ++ W +A K+ + V+AI VG++G ++ VA LAPV + V Sbjct: 305 LAEQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGAVTPVARLAPVFVGGVTV 364 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE----------------- 386 + + D+ GD ++V AG IP + V+ Sbjct: 365 TNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVLLERRPMQPVDLLGEQMEPLHEP 424 Query: 387 -RTKPTPPENR-------FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRA 438 R T P ++ +CQ Q L+ +++ + + G+G+ A Sbjct: 425 FRLPETCPVCGSAVEREAGEAVARCTGGMLCQAQRAQGLIHFASRKAMDIAGLGDKQIEA 484 Query: 439 LHQTHRFEHIFSWLLLTPEQLQNT-PGIAK--SKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L L +LQ G + + + +R P R++ A+GI Sbjct: 485 LVAADVLHSFADIYRLDIAKLQTIKDGKSAATKWAQNILDSIAQSRTPPLARFLFALGIR 544 Query: 496 LTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 A A+ + + + E LP GS A + + +K+ L Sbjct: 545 HVGESTAKQLAAAFGNLDTVRRAPEPILACLPDIGSVVAHAIAHYFRQPAQQKMLDDLLQ 604 Query: 553 Q 553 Sbjct: 605 H 605 >UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R902_9FIRM Length = 664 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 103/576 (17%), Positives = 218/576 (37%), Gaps = 50/576 (8%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 Q+ I L++ + + +Y+ K V D YD+ L + + F S + V Sbjct: 3 QQRILELRKILDRLAYEYYVLDKPSVSDQEYDRYYQELLKLEDEFPQYRDPNSITQRVGG 62 Query: 85 PPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVYRD 136 L+ V H + + L + + V+ K+DG+A++L Y + Sbjct: 63 VVLDAFEKVSHKRRMLSLDNAFNLEDLMAFDERVRQSVKNPEYVVELKMDGLAISLHYHN 122 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI------- 189 G+ +A++RG+GL GED T V I+++P + + ++GE+ + ++ Sbjct: 123 GRFVQAVTRGDGLVGEDVTNNVRTIASIPMHIDME-GDLEVRGEVIMPKKSFEALNEQRR 181 Query: 190 -QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ----LMSDRLKELATAG 243 Q + N R AG + + D L +++ + Q + L+ L Sbjct: 182 KQGEEEFANPRNAAAGSIRQLDSRIAASRKLDAYLYYFEGAQQHAMHTHEEALEALEAMR 241 Query: 244 FTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEW 299 + + KN EV + E + +LP+ DG+V++ + + Sbjct: 242 IKVNP-LRKVCKNMQEVWQFIQEMSERRNDLPYEIDGMVLKVNDLHAWDLLGTTAKAPRY 300 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +A+K+ V ++ I +VG++G+I+ A L PV + V + + +E D+ Sbjct: 301 AIAYKFPAEEVVTKLLDIVLSVGRTGRITPNAVLEPVRVAGTTVSAATLHNEDMIKEKDV 360 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERTK-----PTPPENRFNSLTC-------YFASD 407 D +++ AG IP + + T+ P + L Y + Sbjct: 361 RINDDVIIRKAGDIIPEVVRSLPERRNGTQGIYKFPQICPFCGSKLVRFADEAAHYCMNQ 420 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL--LTPEQLQNTPGI 465 C + + ++ ++ + +D +G+ H+ I L E++ G Sbjct: 421 DCPARIVRGMIHFASRDAMNIDTLGDKKIEFFHKQGFLNTIEDIYELSLHKEEILALEGF 480 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQ 522 + ++ ++++P + +GI A + A + L+ + E Sbjct: 481 QEKSFQKMILAIEASKERPLEDLLFGLGIREVGKKAARVLAKTYGNIDDLMAAEEAELTA 540 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 + G A+ + + + K+L + L + Sbjct: 541 IKDIGVVTAQSIRAYFAEPKNKELIAHLKGFGLRMD 576 >UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB Length = 684 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 118/592 (19%), Positives = 222/592 (37%), Gaps = 62/592 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVM 83 +A EI RL+++I + + Y+ + E+ D YD + +L + F + D Sbjct: 1 MDKKQAVAEIIRLREEIDRHNYRYYVLARPEISDFQYDAMLEKLVALEGEFPELKTSDSP 60 Query: 84 MPPLNG-------AVMHPVAHTGVRKMVDKNALSLWM-----------RERSDLWVQPKV 125 + G V H + + + R+ + + K Sbjct: 61 SQRVGGGITKEFPTVEHREPMLSLSNTYSIEEVGEFYHRVVKLLPEEHRDSPEFVAELKF 120 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLA-----------N 174 DGVAV+L+YRDG L + +RG+G +G+D T + I +VP + P Sbjct: 121 DGVAVSLLYRDGLLVRGATRGDGSQGDDITGNIRTIRSVPLRLGNPSGSGEGVERYEGRE 180 Query: 175 STLQGEIFLQREGHI------QQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG 228 ++GE+F+ + ++ N R AG + QD + VFV + Sbjct: 181 IEVRGEVFMTKTDFAVLNEGRPEEERFANPRNATAGTLKLQDSGEVSRRKMVFVAYYLKE 240 Query: 229 PQ----LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAEL---PFVTDGVVV 281 ++RL+ L GF T R + ++ + W K L P+ DG+V+ Sbjct: 241 SSAEIISHAERLELLERLGF-YTGGEHRVCRTLKDIREYIDGWQKKRLTGLPYEIDGIVL 299 Query: 282 RAAKEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 + + W +A+K+ +++I F VG+ G I+ VA L PV L Sbjct: 300 KLNNTALRDELGATSKSPRWAIAYKFPAERARTVIRSIVFQVGRLGTITPVAELEPVRLA 359 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRG------------AER 387 V R + ++ + D+ D +++ +G+ IP++ VV + Sbjct: 360 GTTVSRSTLHNLEEVERLDVRLHDTVVIEKSGEIIPKVISVVEEKRRPGTLPVVVPESCP 419 Query: 388 TKPTPPENRFNSLTCYFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 + TP N + Y + C Q +R+ ++ + ++G+G+A L + Sbjct: 420 SCGTPLVKPPNEVHYYCPNSEGCPAQTKARIEHFASRNAMDINGLGKAIVEQLVSSGMVV 479 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNA 503 LTP+ + A+ + L + +R + + R + A+GI A A Sbjct: 480 DAGDLYRLTPDLIMRLDRQAEKSAGNLVNAIAKSRNREYFRVLFALGIRHVGIATARELA 539 Query: 504 SDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + L ++ + + G A V + + L + Sbjct: 540 GAYPTLDMLCKASVEALSDVTDVGPVIAESVHAFFRKPSATAMIEKLREAGV 591 >UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV4_9BACT Length = 675 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 117/591 (19%), Positives = 233/591 (39%), Gaps = 60/591 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + +E +L++ + Q+ +Y+ + V D +YD L L + + S Sbjct: 1 MTKPHLRERAIKLRELLSQYSYEYYVLDRPSVADAIYDSLFGELKKLEAEHPELITADSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLW----------MRERSDLWVQPKVD 126 + V P+ V H + + + + W M E+ + + + K+D Sbjct: 61 TQRVGGVPIAKFQKVEHRTRMLSLNDVFSREEVEAWLLRVRKLAPEMDEKVEFFAEVKMD 120 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN-------STLQG 179 G+A +L+Y +GKL +A++RG+GL GED T V I +VP + + + ++G Sbjct: 121 GLACSLIYENGKLVRAVTRGDGLVGEDVTSNVRTIPSVPLALRTNKEDWRFLKGITEVRG 180 Query: 180 EIFLQREGH--------IQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQL 231 EI + ++ + + N R AG + RQ D + ++ A+ Sbjct: 181 EIVMFKKDFELLNAQLEQEGKKTYANPRNLAAGTI-RQLDPRLVAQRKLYFLAYDLLRDD 239 Query: 232 MSD------RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA--ELPFVTDGVVVRA 283 ++ + + GF + + +++ DE+ W K +LP+ TDG+V++ Sbjct: 240 PAEVPTWEMAYRIVRELGFRSNRD-AKVIQSVDELVEFAESWEKKRFDLPYNTDGMVIKL 298 Query: 284 AKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 R + +A+KY +K I ++G++G + VA L PV++ Sbjct: 299 NDRALYRALGVVGKNPRGAIAYKYPAEQATTRIKDIFVSIGRTGAATPVAMLEPVVIAGS 358 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTP---PEN 395 VQ + + + + GD ++V AG IP + + + G+E+ P PE Sbjct: 359 TVQMATLHNEDEVKRKGVLIGDTVVVQKAGDIIPEVISPIEKLRNGSEKAFKMPKNCPEC 418 Query: 396 RFNSLTC------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + + + +C + + +K L +DG+GE AL + Sbjct: 419 ETDLVRPEGEAVWRCPNPICPAKTWRSIQHFASKAALDIDGMGEKNVAALLDAGLIKDAA 478 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALN---ASDE 506 +L EQ+ A + +L + P +++ A+GI A + Sbjct: 479 DLYVLKKEQILELERFADISAGKLIDAIAAKKHPPLAKFLFALGIRHVGAQTAIDVTAHF 538 Query: 507 RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 S + + +T ++ G G A ++ W E+ + + L + Sbjct: 539 GSLTAIRQATIDQLHEVEGVGEVVAESIVAWFEDPEHQALLDKFEKYGVQP 589 >UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 Length = 841 Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 125/651 (19%), Positives = 221/651 (33%), Gaps = 126/651 (19%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVM 83 A + I RL + ++ +Y+ V D YD+L L + S + V Sbjct: 26 AAQHICRLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 85 Query: 84 MPPLNG--AVMHPVAHTGVRKMVDKN---------ALSLWMRE--------RSDLWVQPK 124 PL G V H V + + + + + ++PK Sbjct: 86 GEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVIEPK 145 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIF 182 DG+A++L+YRDG L +A +RG+G GED TQ + +S +P + G ++GE+ Sbjct: 146 FDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGEVL 205 Query: 183 LQREGHI--------QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP---DG-- 228 + + + Q N R AG + + D T L F ++ DG Sbjct: 206 MLKADFVALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQDGFV 265 Query: 229 PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKE 286 + L GF+L KN DEV + ELP+ DG+VV+ Sbjct: 266 AEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAFYEHMQQKRPELPYEIDGMVVKVNSL 325 Query: 287 PES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 + ++ W VA K+ + V+AI +G++G ++ VA L PV + V Sbjct: 326 AQQHELGFISRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVT 385 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRG-------------------- 384 + + D+ GD ++V AG IP + V++ Sbjct: 386 NATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMRETAVAVSDGIGHRQDD 445 Query: 385 -------AERTKPTPPENRF----NSLTC--------------YFASDVCQEQFISRLVW 419 A +T+ P + + C +CQ Q L+ Sbjct: 446 LFAETPSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIH 505 Query: 420 LGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK------------ 467 +++ + +DG+GE L H L + + + Sbjct: 506 FASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRL---DIPTLQKMKETADKTVAESDQM 562 Query: 468 ------------------SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDE 506 + + ++ R++ A+GI A A Sbjct: 563 PSEGSSVGASGKHKKQPVKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTLAQAF 622 Query: 507 RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + ++ + E LP G+ AR + + A+ + + L A + Sbjct: 623 GTLERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGVAP 673 >UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=DNLJ_GLOVI Length = 668 Score = 569 bits (1467), Expect = e-161, Method: Composition-based stats. Identities = 138/576 (23%), Positives = 226/576 (39%), Gaps = 49/576 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 P +E L+ + +W Y+ EV D +YDQ L + + S R Sbjct: 6 PPEIEEHTRTLRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSPDSPTR 65 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVAVT 131 V P + +V H V + + L W + + K+DG A Sbjct: 66 RVGERPASAFVSVTHRVPMFSLENAFSQAELEKWGERLLRAIGPGLEFICELKIDGSATA 125 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHI 189 L Y DG L + +RG+G++GE+ TQ + I A+P + G A ++GE F+ R+ Sbjct: 126 LSYEDGVLVRGATRGDGVEGEEITQNLRTIRAIPLKLLGGEVPAVLEVRGEAFIPRDEFE 185 Query: 190 QQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG-PQLMSDRLKEL 239 + N R AG + + D LG F + G + + L EL Sbjct: 186 RINQERQAAGEKLFANPRNACAGTLRQLDSRVVASRRLGFFAYTAHYGRAESQWEALAEL 245 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESR--HWLPG 295 + GF + + ++ EV W + ELP+ TDGVVV+ R + Sbjct: 246 ESHGFRVNP-HRSLCRDLAEVRTFCEHWENHRHELPYDTDGVVVKVNAFDHQREVGFTSK 304 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A+KY + V+AI VG++G ++ VA L PV + V R + + R + Sbjct: 305 FPRWAIAFKYPAEEKSTVVEAIAVQVGRTGALTPVAELQPVAVAGTTVSRATLHNQDRIE 364 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNSLT----------CY 403 D+ GD +++ AG+ IP + V+ R E P+ T Sbjct: 365 SLDVRVGDTVIIRKAGEIIPEVVRVIGELRPPEAVPYVFPQTCPECGTAVVRAPGEAAVR 424 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 + C +L A L +DGIG+ L + L+ EQL Sbjct: 425 CPNPRCPALIRGKLGHWCA--ALEIDGIGDKLIARLVSLGLVHTVADLYELSAEQLAGLE 482 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQFW 520 + +A++ Q + + +QP++R + +G+ A++ A S L + Sbjct: 483 RLGARSAAKIVEQLDRSHRQPWSRVLYGLGLRHIGASVSVELARAFASADALARADLAAI 542 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 L G G AR V+EW A+ + L L A + Sbjct: 543 ASLYGFGEELARSVVEWFAQAENRALLERLKAHGLQ 578 >UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5Z4_FLAB3 Length = 667 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 119/577 (20%), Positives = 233/577 (40%), Gaps = 49/577 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 P Q++I L+++I Q + Y+ + + D +D L + F S Sbjct: 2 PENIQQKIDALRKEIHQHNYSYYSLDEPTISDFEFDLKLKELQDLELQFPEFYDNNSPTL 61 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLW-------MRERSDLWVQPKVDGVAVT 131 V V H + D N L W + E + + K DG +++ Sbjct: 62 RVGGQITKNFPTVQHQFRMFSLDNSYDFNDLEEWEKRIRKTLNEPVEFVAELKYDGASIS 121 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN-STLQGEIFLQREGHIQ 190 ++Y +GKLN+A++RG+G +G++ T V IS +P + G ++GEI+L + + Sbjct: 122 ILYENGKLNEAVTRGDGFQGDEITSNVKTISQIPMQLHGDFPERFFMRGEIYLTHQNFEK 181 Query: 191 QQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD---GPQLMSDRLKE 238 +N R +G + QD + L ++ + Q + L++ Sbjct: 182 INKRREEEGLDPFMNPRNTASGSLKMQDSGEVRKRGLSAVLYQFISENTAAQTHWELLQK 241 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESR--HWLP 294 + GF ++ + + DEV N W + L F DG+VV+ + R + Sbjct: 242 AKSWGFRISDQ-AKLCADLDEVKAFINFWDENRHTLAFDIDGIVVKVNDLAQQRVLGYTA 300 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 W +A+KY+ E++ + + VG++G I+ VA+L PV+L V+R ++ + Sbjct: 301 KSPRWAMAYKYKAEKAETELQTVTYQVGRTGAITPVANLKPVLLAGTVVKRASLHNEDII 360 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDV--VWRGAERTKP----TPPENR------FNSLTC 402 ++ + D + V G+ IP+I V R + PE + Sbjct: 361 RKLGLYEHDFVYVEKGGEIIPKIVGVNLAKRNPANAEIQYIKNCPECSTALIRVEDQAIH 420 Query: 403 YFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 + ++ C Q I R++ +++ L ++ +G L++ E+ + LT EQL Sbjct: 421 FCPNELHCPPQVIGRMIHYVSRKALNIENLGSETIEQLYREKLVENPADFYALTKEQLLP 480 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ 518 +A+ + + +++ F + + +GI A + S L +T Sbjct: 481 LERMAEKSAQNIITGIEKSKEIAFEKVLFGIGIKHVGETVAKKLVKNFNSIDDLKNATAA 540 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 Q+ G A + E+ +N + + L + + Sbjct: 541 ELVQVEDIGLKIAESITEFFKNPENVLMIERLKSYGV 577 >UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetaceae RepID=D2R1J9_9PLAN Length = 676 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 125/584 (21%), Positives = 226/584 (38%), Gaps = 55/584 (9%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 E + L++ I++ D Y+ + E+ D YD+L LT + F S + V Sbjct: 7 EILERLQALREAIRRHDYLYYVRAQPEISDLEYDRLMQDLTTIEASFPELVTPDSPTQRV 66 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERS--------DLWVQPKVDGVAVTL 132 P+ G V H + L + S + V+ KVDGVA+++ Sbjct: 67 GEEPMEGLVQVAHRAPMLSIENSYTVEDLQKFAERTSKSLDGEAVEWVVELKVDGVAISV 126 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREG--- 187 Y +G L +A++RGNG G+D T V I+ VP + G A ++GE+++ Sbjct: 127 RYENGLLVQALTRGNGEVGDDVTHNVRTIADVPLRLYGDKIPAVLEVRGEVYMTNSDLVL 186 Query: 188 --HIQQQMGG---INARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLK 237 QQ++G N R +G + D L + V + L+ Sbjct: 187 LNKRQQELGKELYANTRNVASGTIRLLDPKLCAERKLRMLVHGVGVCEGMTAENHMQFLE 246 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEPES--RHWL 293 ++++ G T + + E + E EL F DG+V++ + + Sbjct: 247 QVSSLGLPPTP-HCKCFATFSEAVKYCEEIPERLHELDFEVDGLVLKVNRFDQRAKLGQR 305 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W++A+K++ ++ I VGK+G I+ VA L PV L V R ++ + Sbjct: 306 SKSPRWVIAYKFEKYEATTKLLGISVQVGKTGAITPVAELEPVQLAGTTVSRASLHNADE 365 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP-ENRFNSLTC---------- 402 DI GD ++V AG+ IP I V AERT P + + C Sbjct: 366 IVRKDIRIGDIVVVEKAGKIIPHIVRV--EAAERTTDLPVFQFPTHCPVCGSDVAKDEGG 423 Query: 403 ---YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + C Q +L + + + ++G+G+ L + LT ++L Sbjct: 424 VYIRCTNPSCPAQLREKLRFFATRGAMDIEGLGDKLVDQLVASKLVTCYGDLYRLTLDKL 483 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQLLFST 516 + + + + +L ++ +P +R + + I + + A + + +T Sbjct: 484 TSLERMGEKSATKLLEGIVASKSRPLSRLLNGLSIRHIGSNGSQVLARHFGTLDAIRQAT 543 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + ++ G A V E+ + K L A + EP Sbjct: 544 LEDLSRVSEVGEITAASVYEFLHSDYGKTTIDDLVALGLNTQEP 587 >UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R586_9CHLA Length = 668 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 121/587 (20%), Positives = 222/587 (37%), Gaps = 54/587 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + + + L QI + Y+ + + + D +D L +L Q ++ S Sbjct: 1 MTKPSSHQSYQELCNQIWSHNKAYYVDHRPVISDEEFDHLMHQLEQMEKEHPEWISSASP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGV 128 + V G V H + K+ + ++ + K+DG+ Sbjct: 61 TQRVGEMLTEGFQTVAHRTPMLSLANSYSKDEVQDFIHRVKKLTRSQDVAFSCELKMDGI 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN--STLQGEIFLQRE 186 A++ + G + I+RG+G KG+D TQ + ++A P + GP A ++GEIF+ ++ Sbjct: 121 AISAQFEKGIFVRGITRGDGKKGDDITQNLRTVAAFPLQLIGPSAPDFLEVRGEIFMPKQ 180 Query: 187 GHIQQQMGG--------INARAKVAGLMMRQDDSDTLNS-LGVFVWAWP----DGPQLMS 233 + N R AG + D ++T L V + D Sbjct: 181 VFQKLNAEKELEGEDLWANPRNAAAGSLKLLDPNETRRRKLDVVFYGIGQDSQDALTSQF 240 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES-- 289 L + G + + +E+ + +A LPF DGVVV+ E Sbjct: 241 ACHALLKSYGLPILHQVEK-CHTLEEIWEFVEKVRTLRASLPFEIDGVVVKLDSLAEQKR 299 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W VA+K+ ++ +I VG++G ++ VA L PV L + R + Sbjct: 300 LGSTGKNPRWAVAYKFAAEQAETDIYSITVQVGRTGVLTPVAELKPVFLAGSTIARATLH 359 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TKPTPPENRFN------ 398 + DI GD +++ G IP++ V + + PT + Sbjct: 360 NEEEVLRKDIREGDSVIIEKGGDVIPKVVSVNFDKRKSDSHPWKMPTHCPSCGALVARSV 419 Query: 399 ---SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 ++ C + C EQ + RL++ K + ++ +GE L + + LT Sbjct: 420 DEVAVKCPN-TLHCPEQQLRRLIYFAGKFAMDIEHMGEKVVEQLVRLGFVKRPSDIYALT 478 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 EQL G L ++ F+R++MA+GI A L A + L Sbjct: 479 SEQLFQLEGFKTKSVENLITSIEKSKDVSFSRFIMALGIKHVGEGTAELLAKRAGNVHIL 538 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + T + Q+ G G A ++E+ +A+ ++ L + + E Sbjct: 539 MQMTTEELLQIEGIGEKVATAIVEYFADARNQEEIQLLLQRGVLPQE 585 >UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUF5_9FIRM Length = 671 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 107/579 (18%), Positives = 222/579 (38%), Gaps = 49/579 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 Q + ++ + + Y+ +S V D YD L L + + S Sbjct: 3 MPSQNLQARLEEVKHLLNDYAYHYYVLDQSLVSDASYDALYRELEEIEAAHPEWITPDSP 62 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVA 129 + V L G V H + + ++ ++ + + K+DG+A Sbjct: 63 TQRVGDQLLEGFSKVAHAESMYSLGNAFSPEEVTQFIERVTQQVEGPVSFMCECKIDGLA 122 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 + L Y+DG + +RG+G GED TQ + I ++P + L+ ++GE ++ + + Sbjct: 123 IALTYQDGVFVRGATRGDGTIGEDITQNLRTIRSLPLRLRQNLS-VEVRGECYMPKAVFL 181 Query: 190 --------QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQLMSDR----L 236 Q Q N R AG + + D L +F+++ + + Sbjct: 182 ALNEEREAQGQEIFKNPRNAAAGGLRQLDPRAVADRQLNIFLYSAVYTDEFHPESQAGLF 241 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHW 292 G R + A+EV + +LP+ DGVV++ + ++ + Sbjct: 242 AAFEQLGLRTNP-LRRECQTAEEVIDYIQMIGQQRHDLPYEIDGVVIKVNHIDQQQALGF 300 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W +A+K+ V ++ +++ VG++G ++ A + PV L VQR ++ +V Sbjct: 301 TVKAPRWAIAYKFPAEEAVTTLREVEWTVGRTGVVTPTAIMDPVPLAGTTVQRASLHNVD 360 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVW-RGAERTKPT-----PPEN------RFNSL 400 + D+ GDQ+ + AG IP I V+ + + ++P PE + + Sbjct: 361 LIESLDVRIGDQVTIHKAGDIIPEITSVLLAKRPQDSQPLAIPTHCPECQTALVRQGEEV 420 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 + VC Q ++ L ++ + + G+G L + + L+ E L Sbjct: 421 ALRCPNLVCPAQRLALLSHFVSRGAMNIQGLGPRILNQLVASQAVTELDDLYRLSLEDLL 480 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFSTE 517 + I + + +L ++ R + +GI A L ++L +T Sbjct: 481 SLDKIQEKSAQKLLAAIEASKSNSAERLLFGLGIRHVGAKAARLVLQVFGDLNRLSQATA 540 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 + + G G ++ ++++ + + LA + Sbjct: 541 EEIGAIEGVGPIISQSLVQYLTLESSQAMLKRLAEAGVN 579 >UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ6_CRYCD Length = 725 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 126/602 (20%), Positives = 223/602 (37%), Gaps = 71/602 (11%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 I L+++I+ Y+ + + D +D L L Q + S Sbjct: 11 DQDDVGARIEALRREIEHNSWLYYAQDAPAISDAAFDSLMRELRQLEAEHPEFYDPTSPT 70 Query: 80 RDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVAV 130 + V AV H + +D + L WM + L + K+DG + Sbjct: 71 QRVGGYVGEQFAAVTHAERMYSLDNAMDLDELDAWMDRTFEALGTDVPLCCELKIDGSGI 130 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN--------STLQGEIF 182 + Y DG+L +A +RG+G+ GED T + + VP + + L+GE++ Sbjct: 131 AVTYEDGRLMRAATRGDGVVGEDVTANIRTVRDVPLRLRAEALDALTDVEEALELRGEVY 190 Query: 183 LQREGH--------IQQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQL-- 231 + ++ + + N R AG + ++D + T L F +A L Sbjct: 191 MPKKSFNALNAAADREGRQEFANPRNAAAGSLRQKDPTITAQRDLSTFTYATASNAALTL 250 Query: 232 --MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK-- 285 + L+ + AGF + R + DEV E + LP+ DGVVV+ Sbjct: 251 PGQWELLEWMRNAGFHVNPD-VRLCHSRDEVRAFCKEALDKRQSLPYEIDGVVVKVNDFS 309 Query: 286 EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + + W +A+K+ P + ++ I VG++G ++ VA L PV + V R Sbjct: 310 LQDRLGFTARAPRWAIAFKFPPEEKTTLLRDITVQVGRTGALTPVAELEPVSVSGSVVSR 369 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTK------------PT 391 + + + D+ GD ++V AG IP + V R A+ P Sbjct: 370 ATLHNEDEVRRKDVRVGDTVIVRKAGDVIPEVLGPVLSLRPADAQPWHAPTSCPSCGSPV 429 Query: 392 PPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 E L C S C Q RL+ ++ L ++G+GE L ++ R + + Sbjct: 430 VREEGGAILRC--VSLDCPAQAHERLIHWASRGALDIEGMGEEVIGRLLESGRVVDVADY 487 Query: 452 LLLTPEQLQNTPG-----------IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR-- 498 LT L + + +A++ Q + ++ + F R + +GI Sbjct: 488 YHLTEYDLATLDMGRVNKDGEAIHLGSTVAAKIVGQIDQSKHRGFARVLFGLGIRHVGKT 547 Query: 499 -AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 A A S L + + G G A + + Q ++ L A + Sbjct: 548 TAEAIAQAYPSIEALREAKMDDLAAIEGIGPIIAESLFVFLRTPQNVQVIDRLLAAGVVM 607 Query: 558 FE 559 E Sbjct: 608 EE 609 >UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI Length = 774 Score = 566 bits (1459), Expect = e-160, Method: Composition-based stats. Identities = 127/628 (20%), Positives = 217/628 (34%), Gaps = 100/628 (15%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 ++ L++++++ Y+ + +ED VYD L L + + + S + V Sbjct: 7 EVEQYTQNLREKLQEAGYSYYVLDQPIMEDAVYDHLLRELQELESQYPQLIVSDSPTQRV 66 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------------------------- 115 P +V H + + + L W Sbjct: 67 GEKPATKFVSVKHNIPLYSLENAFNIQELKSWQERWQRQTLLENQRLTLPLRGEVKIKNS 126 Query: 116 ----------------------------RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGN 147 D + K+DG A+ L Y +G L + +RG+ Sbjct: 127 IDESDNFSTVNSLAPVITGSNFDEIDLASVDYICELKIDGSALALTYENGLLVRGATRGD 186 Query: 148 GLKGEDWTQKVSLISAVPQTVS--GPLANSTLQGEIFLQREGHIQQQMG--------GIN 197 G+ GED TQ V I+++P + P ++GE FL N Sbjct: 187 GIMGEDITQNVKTINSIPLKLKVDNPPLLVEVRGEAFLSINVFENINAEREKIGEIIFAN 246 Query: 198 ARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ--------LMSDRLKELATAGFTLTQ 248 R AG + + D L F + S L+ L GF + Sbjct: 247 PRNAAAGTLRQLDSKIVAKRRLDFFAYTLYLEENESNFLQFYTQSQCLELLKKLGFKVNP 306 Query: 249 TYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE--PESRHWLPGQAEWLVAWK 304 + + +EV W + LP++TDGVVV+ E + W +A K Sbjct: 307 N-GQVCSSLNEVEAYYQYWDKQRENLPYLTDGVVVKLNSLSLQEKLGFTQKYPRWAIALK 365 Query: 305 YQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQ 364 Y V+ + VG++G I+ VA L PV L VQR ++ + R E D+ GD Sbjct: 366 YPAEEIPTIVQGVTVQVGRTGAITPVAELKPVQLAGTTVQRASLHNSDRLAELDLHIGDT 425 Query: 365 ILVSLAGQGIPRIDDVVWRGAER-----TKPTPPENRF-------NSLTCYFASDVCQEQ 412 ++V AG+ IP + V+ + PT N + C Sbjct: 426 VIVRKAGEIIPEVVRVLPELRPKKAQRFQMPTHCPECSQPLIKPRNEAVTRCINTSCPAI 485 Query: 413 FISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQ 472 L ++ L ++G+GE + L + + + LT E L + + K + + Sbjct: 486 LRGSLAHWASRAALDINGLGEKLVQQLVNSGLVKSVADLYNLTMEDLTSLERMGKKSANK 545 Query: 473 LWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSG 529 L ++ QP+ R + +GI A L + +QL + + + G G Sbjct: 546 LIEAMGTSKAQPWRRVLYGLGIRHVGTVNAELLTQKFPTVAQLSQAKATDIETVHGIGPE 605 Query: 530 RARQVIEWKENAQIKKLGSWLAAQQITG 557 A+ V +W + L L +T Sbjct: 606 IAQYVEQWFRVPANQNLVERLKIAGVTM 633 >UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH Length = 714 Score = 566 bits (1459), Expect = e-160, Method: Composition-based stats. Identities = 119/590 (20%), Positives = 218/590 (36%), Gaps = 59/590 (10%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 + A+ I L+ I+ D Y+ + D YDQL L + F S Sbjct: 27 TKEDAEAIIEDLRDVIRYHDWRYYVLANPVISDYEYDQLFHLLKDIESRFPELITPDSPT 86 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVA 129 + V V H + ++ L + R + V+PK DG Sbjct: 87 QRVPSELTKEFPQVKHLAPMLSLDNSYNEEDLREFDRRVREAVGIDIIEYAVEPKFDGAG 146 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS---GPLANSTLQGEIFLQRE 186 ++LVY + +RG+G+ GED T + +I VP + + ++GE+ + +E Sbjct: 147 ISLVYEKDMFVRGATRGDGVVGEDITPNIRVIKTVPLSAEFSVYGIDRIEIRGEVLINKE 206 Query: 187 -----GHIQQQMGG---INARAKVAGLMMRQDDSDTLNS-LGVFVWAW------------ 225 H + + G N R AG + QD + L FV+ Sbjct: 207 KFKEINHQRLEEGLPPLANPRNAAAGSLRLQDPKEVAKRGLEAFVYQITYAVDKDGNNLL 266 Query: 226 PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA--ELPFVTDGVVVRA 283 + + D +K L GF + + DEV EW + + P+ DG+V++ Sbjct: 267 GNKLRYHYDSIKILYELGFKSPYKEIKVCRGIDEVIDYCREWERKRDDYPYEIDGMVIKV 326 Query: 284 AK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + W +A+K++ ++ + F VG++G ++ VA L PV + Sbjct: 327 NDISLYDRLGVTSHHPRWAIAFKFRARQATTKIIKVVFQVGRTGAVTPVAKLEPVEIGGV 386 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS 399 V V++ + +E DI GD +L+ AG IP + VV R + P+ + Sbjct: 387 TVSSVSLINEDFIKEKDIRVGDLVLIERAGDVIPYVVKVVTEARTGKEKPIQFPKECPSC 446 Query: 400 LTC----------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + + C Q + R+++ +K + + G+GEA R +Q I Sbjct: 447 GSPLVKPAGEAVWRCININCPAQVVERIIYFASKDAMDIRGLGEANIRKFYQLGFLRSIP 506 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSW 509 L +++ G + L ++ +P R + +GI + + Sbjct: 507 DIYRLPYDKIIQLEGFGQKSVENLKKAIEESKNRPINRLITGLGIRFVGKVTARTLAENI 566 Query: 510 ---SQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 L + + ++LP G A + ++ N K+ L + Sbjct: 567 NCVEDLKDWSVEDLERLPDVGYVVAHSIYDFFHNPDNIKMIQELKRLGVQ 616 >UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL Length = 859 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 121/653 (18%), Positives = 219/653 (33%), Gaps = 129/653 (19%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 + I L + ++ +Y+ V D YD+L L + S + V Sbjct: 42 AQRIKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGG 101 Query: 85 PPLNG--AVMHPVAHTGVRKMVDKN---------ALSLWMR--------ERSDLWVQPKV 125 PL G V H V + + + E+ + ++PK Sbjct: 102 EPLAGFDEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDERVHGGLNGEKPEYVIEPKF 161 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFL 183 DG+A++L+YRDG L +A +RG+G GED TQ V +S +P + G ++GE+ + Sbjct: 162 DGLAISLLYRDGVLTQAATRGDGTTGEDVTQNVKTVSNIPLRLHGENIPELIEIRGEVLM 221 Query: 184 QREGHI--------QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP--DGPQLM 232 + Q N R AG + + D T L F ++ G + Sbjct: 222 LKADFAALNARQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSIARQQGGFIA 281 Query: 233 SDRLKEL---ATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP 287 + L+EL GF+L + N DEV + + LP+ DG+VV+ Sbjct: 282 EEHLQELSYCKELGFSLPDSNFGCFPNIDEVLAFYEQMQQKRPTLPYEIDGMVVKVNSLA 341 Query: 288 ES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + ++ W +A K+ + V+AI +G++G ++ VA L PV + V Sbjct: 342 QQEKLGFISRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTN 401 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE------------------- 386 + + D+ GD ++V AG IP + V++ Sbjct: 402 ATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETKISVSDGLQDDLFAE 461 Query: 387 -----RTKPTPPENRF--NSLTCY--------------FASDVCQEQFISRLVWLGAKQV 425 R++P R + C+ +CQ Q L+ +++ Sbjct: 462 TPSETRSEPIHKPYRLPTHCPICHSEIEREEGEAVARCSGGMLCQAQRAQGLIHFASRKA 521 Query: 426 LGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK------------------ 467 + +DG+G+ L H L + + + Sbjct: 522 MDIDGLGQKQIEQLVAQDLVRHFADLYRL---DIPTLQKMKETADKASANEEEPSNSEIE 578 Query: 468 --------------------SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNAS 504 + + ++ R++ A+GI A A Sbjct: 579 DFEGETGNTLLAKNVKKQPTKWAENILAGIEASKTPELARFLFALGIRYVGERTAKTLAQ 638 Query: 505 DERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + + + E LP G+ AR + + + + L A + Sbjct: 639 AFGTLENVRHAPEPILACLPDIGTVVARSIAHFFAQKAQQAMIDELLAVGVAP 691 >UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGA2_9BACT Length = 652 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 111/571 (19%), Positives = 216/571 (37%), Gaps = 49/571 (8%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC------FGSEPRDVMMPPL 87 L ++ + Y+ E V D YD+L L + + S + V P+ Sbjct: 3 YRELVDKLNYYSKKYYVEDDPVVADAEYDKLYNELLRIEAEDPSIISHDSPSQRVGDKPV 62 Query: 88 NG--AVMHPVAHTGVRKMVDKNALSLWMRER------SDLWVQPKVDGVAVTLVYRDGKL 139 G V H + + + L ++ +++ V+PK+DG A+ L Y DGKL Sbjct: 63 TGLENVTHEIKLLSLSNAYSREELEKFVENIWDEYPGAEIVVEPKIDGAAMVLTYEDGKL 122 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ-------- 191 + +RG+G GED T + I ++P + ++GE+F+ + Sbjct: 123 VRGATRGDGTTGEDVTHNIRTIRSLPLEI-EKSGRMIIRGEVFMPVASFERLNRLKGEKG 181 Query: 192 QMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWP---DGPQLMSDRLKELATAGFTLTQ 248 + N R AG + + DS T G+ V+ + G + ++ + + GF + + Sbjct: 182 EKLFANPRNAAAGTL-KLLDSKTAYERGLDVFLYGMDMGGTEHHLKDMELMKSLGFNINE 240 Query: 249 TYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWK 304 TR N +++ + L + DG V++ + R +W +A+K Sbjct: 241 -MTRKFNNFEDIWAHVEYIGSRRNSLEYDIDGAVIKVDSKAYQRSLGSTIKSPKWAIAYK 299 Query: 305 YQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQ 364 Y V ++ + F VG++G I+ VA L PV L + + + I GD+ Sbjct: 300 YPAQEAVTILRDVDFQVGRTGSITPVAKLEPVFLAGSTISNATLHNEDEIARLGIKIGDK 359 Query: 365 ILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCY-------------FASDVCQE 411 + + G IP++ + + ++ E N C + VC Sbjct: 360 VTIRKGGDIIPKVVRPIIDERDGSERDI-EFLSNCPVCQSKLQKEETDINRKCINPVCPA 418 Query: 412 QFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSA 471 Q +L+ +++ + + G GEA L + + L+ G + Sbjct: 419 QRKLKLLHFASRKAMDIQGFGEALVNKLVDDGELHDVADIYEKRFDYLKEEDGYGEKSVQ 478 Query: 472 QLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGS 528 +L ++K+PF + + +GI A + A +L+ + E+ + GS Sbjct: 479 KLHEAIENSKKKPFDKVLYGLGIRHVGERTAQVLAEYFGDIDKLVSADEEALVNVRDIGS 538 Query: 529 GRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 A ++ N + + + L + Sbjct: 539 ETAGAIVNSFANDDLSNIINRLKKSGLCFTA 569 >UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UL89_YERRU Length = 569 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 229/566 (40%), Positives = 352/566 (62%), Gaps = 9/566 (1%) Query: 1 MKVWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV 60 M ++A+++G + Q++ + CP WS EI+++++Q QWD Y ++G S ++D + Sbjct: 3 MMRFIAVMLGWVICQAATASECPEWSEHELVTEIAKMEEQFGQWDKAYHQQGNSLIDDDI 62 Query: 61 YDQLSARLTQWQRCFGSEPRDVMM-----PPLNGAVMHPVAHTGVRKMVDKNALSLWMRE 115 YDQL RL+ W+ C + V ++ V HPVAHTG++K+ A S W+ Sbjct: 63 YDQLHQRLSHWKSCVKALEPAVNSHITALAGVSDKVTHPVAHTGLKKLTGNLAASEWILA 122 Query: 116 RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS 175 R +LWVQPKVDGVAVTL Y G L + ISRG+G++G+DWT K ISA+P +S Sbjct: 123 RKNLWVQPKVDGVAVTLTYLQGHLTQVISRGDGVRGQDWTDKAQYISAIPSLISPAPPLL 182 Query: 176 TLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDR 235 L GE+FL+ H Q+ GGINARA VAG +MR+ S L+ +GVF+WAWPDGP M ++ Sbjct: 183 VLHGELFLRVHDHRQKDSGGINARASVAGALMRKSPSSLLSQIGVFIWAWPDGPASMVEK 242 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPG 295 L+ L GFTL++ ++ + + + R W+++ LPFVTDG+V+R +EP +W Sbjct: 243 LRTLHRMGFTLSEEFSVPITSFTDAVHWRKIWFQSPLPFVTDGIVIRQEEEPAGHYWQSQ 302 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +AWKY P Q+A+VK++ F +G++GKIS V L+P+ LDDK V+ VN+G+V RW+ Sbjct: 303 PGYWSIAWKYPPFQQMAQVKSVNFTIGRTGKISAVLHLSPIKLDDKWVKGVNLGTVARWK 362 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE-NRFNSLTCY-FASDVCQEQF 413 W++ PGDQ++VSLAGQGIPR+D V WR +R + + P+ ++F++ +C+ S +C+ QF Sbjct: 363 RWNVLPGDQVIVSLAGQGIPRLDKVAWRVDKRDEISTPDMDQFHTFSCFRRESTLCETQF 422 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQL 473 I+RL WL + L + GI W+AL + SWL LTPE + PGI + K+ ++ Sbjct: 423 IARLTWLSGRSGLDMLGISSGIWQALTAHGLMGDLASWLELTPEIIATVPGIGEVKANKI 482 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQ 533 + QF A+ +PF W+ A+G P +AA+N ++W+ L W + G+GR +Q Sbjct: 483 YLQFQKAKTRPFISWLAALGFP--KAAINPRVPKTWAALQQQPRGEWLTMANIGAGRLKQ 540 Query: 534 VIEWKENAQIKKLGSWLAAQQITGFE 559 + E+ + ++ +L LA Q+ GF+ Sbjct: 541 ITEFTTHPEMLQLAERLAYHQVQGFK 566 >UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW Length = 663 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 114/579 (19%), Positives = 229/579 (39%), Gaps = 47/579 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A++ I +L + I + Y+ + E+ED YD+L L +R F S Sbjct: 1 MNIEEAKQRIEQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGV 128 V L HP+A + ++++ + + V+ K DG+ Sbjct: 61 TNKVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLEFDNRMQKELNQSKIKYTVENKFDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 A+ L+Y GKL A +RG+G GE+ T V ++S VP+++ ++GE + ++ Sbjct: 121 ALELIYEKGKLTVASTRGDGQVGENVTNNVKMMSNVPKSIKEK-KKLIVRGEALITKKDF 179 Query: 189 IQ--------QQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQL----MSDR 235 +++ NAR +G + + D +++ L F + + Sbjct: 180 EALNKEREELEEIPFANARNAASGGLRQLDSAESKKRRLKFFAYQIANYKDFDLTNEYKS 239 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAK--EPESRHWL 293 ++ L+ GFT+ + + ++++ + DG+V++ E +L Sbjct: 240 MEFLSELGFTVEGVHPNIDAKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKHQEKLGFL 299 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 + VA+K++P + +K I+ VG++G ++ VA L PV + V V + + Sbjct: 300 SRAPRFAVAFKFKPEEKETVLKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHNPNE 359 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA-------ERTKPTPPENRFNSLT----- 401 + DI GD ++V +G IP+I VV E K P ++T Sbjct: 360 IKSKDIRIGDTVVVIRSGDVIPKITRVVLEKRTADSKPFEFPKKCPVCGGDTAVTDGDVI 419 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 ++ C + + + +K + ++ IG+ ++ + +T + L Sbjct: 420 VRCINEECPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRDDLFK 479 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ 518 + + + + ++ R++ A+GI A L A S +T Sbjct: 480 FERMGEKLAGYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIENFKKATID 539 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 Q + G G A+ + ++ N + KL L A + Sbjct: 540 DLQNIEGIGEISAKSIYDFLHNEKTLKLIDDLLASGVNP 578 >UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNLJ_PARL1 Length = 710 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 118/608 (19%), Positives = 225/608 (37%), Gaps = 76/608 (12%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A EE+ RL +I++ D Y+++ + D YD L R + + S Sbjct: 20 LTLEEAPEELERLAAEIEKHDKLYYQKDAPRISDAEYDTLRRRNEAIEARYPELVREDSP 79 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPKV 125 V P +G V+H V + D + + +PK+ Sbjct: 80 SHRVGAQPADGFGKVVHKVPMLSLSNAFDDEDVRDFALRIRRFLNLKEEDILPITAEPKI 139 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFL 183 DG++ L Y GK +RG+G +GE+ T+ + I +P + G ++GE+++ Sbjct: 140 DGLSAALRYEKGKFVMGATRGDGREGENVTENLKTIGDIPAELKGKNIPDVVEVRGEVYM 199 Query: 184 QREGHI-----QQQMG---GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQLMSD 234 E Q++ G N R AG + + D T L F + W + L +D Sbjct: 200 SHEDFAALNERQREAGKPVFANPRNAAAGSLRQLDAKITASRPLRFFAYTWGEMSDLPAD 259 Query: 235 R----LKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKE-- 286 + GFT+ + R + + + E +A L + DGVV + + Sbjct: 260 TQSGVMDAFRKWGFTVNPLFGR-CDTVEALIDFYHDIEERRATLGYDIDGVVYKVDRLDW 318 Query: 287 PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 ++ W +A K+ + ++ I+ VG++G ++ VA L PV + V Sbjct: 319 QNRLGFVSRSPRWALAHKFPAEQAMTVLEKIEIQVGRTGALTPVARLTPVTVGGVVVSNA 378 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP-----TPPENRFNSLT 401 + + + + PGD ++V AG IP+I VV K T PE +++ Sbjct: 379 TLHNADEIERLGVRPGDTVVVQRAGDVIPQIVRVVEDRPRGKKKFVFPDTCPECGSHAVR 438 Query: 402 -------------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 VC Q + RL ++ ++G+GE A + + Sbjct: 439 EVNPKTGKLDAVARCTGGLVCPAQAVERLRHFVSRNAFDIEGLGEKQIAAFFEDGLIKKP 498 Query: 449 FSWLLL------TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALN 502 L + ++L++ G + + +L+ + R+ R++ +GI Sbjct: 499 DDIFTLAARDAKSLKKLKDREGWGATSARKLFDAIDARREVELDRFIFGLGIRHVGETNA 558 Query: 503 ASDERSWSQL------LFSTEQ-------FWQQLPGTGSGRARQVIEWKENAQIKKLGSW 549 RS+ L + + + G G A ++++ +++ Sbjct: 559 RLLARSYGTLDHFEEQMRAAADREDEAYAELLSIDGVGEVLAESIVDFFAEKHNREVLDG 618 Query: 550 LAAQQITG 557 L + G Sbjct: 619 LREAGVKG 626 >UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDU0_RHOVA Length = 777 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 128/631 (20%), Positives = 225/631 (35%), Gaps = 107/631 (16%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------E 78 S A++E L +I + D Y ++ E+ D YD+L RL + F S Sbjct: 59 LSAEDAKDEHDALAAEIARHDLLY-QDAAPEISDAEYDRLRLRLNALEAAFPSLITPESP 117 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWM-----------RERSDLWVQPKV 125 + V P V H V + + ++ + E D+ + K+ Sbjct: 118 SQTVGATPSEKFAKVRHTVRMLSLGNVFSDEDVADFAGRVRRFLKFAPDEALDVTAEMKI 177 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFL 183 DG++V+L Y +G+L A +RG+G +GED T V I+ +PQ + A ++GE+++ Sbjct: 178 DGLSVSLRYENGRLAVAATRGDGSEGEDVTANVRTIADIPQVIRANDVPAVFEVRGEVYM 237 Query: 184 QREGHI---QQQMG-----GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD------- 227 ++Q+G N R AG + + D + T L F W W + Sbjct: 238 SHADFQALNERQVGKGGRMFANPRNAAAGSLRQLDPAITAARPLRFFAWGWGEVRGWGEA 297 Query: 228 ---GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVR 282 L+ + GF L ++ +E+ V E +A L + DGVV + Sbjct: 298 SALPADTNFGVLQAIHGWGFPLPP--VEICRSVEEMLAVYRAIEMKRASLGYDIDGVVYK 355 Query: 283 AA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 E ++ W A K+ + I VG++G ++ VA LAPV + Sbjct: 356 VNRLDLQERLGFISRTPRWATAHKFSAEKATTVLNGIDIQVGRTGALTPVAKLAPVTVGG 415 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA-----ERTKPT---- 391 VQ + + + D+ GD ++V AG IP+I V E PT Sbjct: 416 VVVQNATLHNEDEIRRKDVRIGDTVIVQRAGDVIPQILGPVLEQRPADAVEFVFPTLCPV 475 Query: 392 ----------PPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 P + +++ +C Q + RL ++ ++G+GE +A Sbjct: 476 CGSHAVRETHPKTGKVDAVRRCTGGLICAAQAVERLRHFVSRHAFDIEGLGEKNIQAFFD 535 Query: 442 THRFEHIFSWLLLTPEQ------LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 R + + L G +A L+ R R++ A+GI Sbjct: 536 EGRIKAPADIFTMAARDGVDLPKLSEKEGWGAQSAANLFAAIEARRTISLERFIFALGIR 595 Query: 496 LTR---AALNASDERSWSQLLFSTEQ--------------------------------FW 520 A L A S L + + Sbjct: 596 HVGETTAKLLAKTFGSLDALRAAMAEPDAAELRPGDELLLESASGEDKRSLHRAIILAKL 655 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLA 551 ++ G G A+ ++++ + ++ L Sbjct: 656 NEIDGIGDVVAQSIVDFFDEPHNREAVDALR 686 >UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 Length = 671 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 117/588 (19%), Positives = 221/588 (37%), Gaps = 56/588 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 +A++EI RL + + Y++E + E+ D +DQL +L + F S Sbjct: 1 MDKEQARKEIKRLTALVAYHNKLYYEEAQPEISDYEFDQLLEKLIALENQFPDLRLPNSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERS--------DLWVQPKVDGV 128 + V P V H + + +++ + + + K DGV Sbjct: 61 TQRVGGEPSKKFATVYHQYPMLSLSNTYSAEEVMQFVKRAHKQLPGATIEFFCELKFDGV 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQRE 186 A++L+Y++GKL+K ++RG+G KG+D T+ I +PQ + ++GE F+ Sbjct: 121 AISLLYKEGKLDKVVTRGDGFKGDDITENAKQIPNIPQIIEHKDLPPAFEVRGEAFMSLA 180 Query: 187 GHIQQQMGG--------INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG---PQLMSDR 235 + N R AG + + L ++++ Sbjct: 181 DFEKLNRDRLAHGLEPLANPRNATAGTLKTLKSTGPKRWLDCYMYSLLSTDMDLPTHEVC 240 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RH 291 ++ L F ++ TY + + +EV W K LP DGVV++ + Sbjct: 241 IQWLEKWCFHVSPTY-KKCRTLEEVMAYIEYWESAKNSLPVAIDGVVIKVNDTLQQNKLG 299 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W +A+KY+P ++++ + VG++G I+ VA L P++L V+R + + Sbjct: 300 LTAKSPRWAIAYKYKPENLATILESVDYQVGRTGVITPVAHLKPILLAGTIVKRATLHNA 359 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRI--DDVVWRGAERTKPTPPENRFNSLTC------- 402 Q D+ GD + + G+ IP+I DV R + P + + C Sbjct: 360 GEIQRLDLHLGDTVFIEKGGEIIPKITGTDVSKRSLD---SEPVKFVTHCPACGTELVKR 416 Query: 403 ------YFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 Y + C Q L ++ + + IG+ L L Sbjct: 417 YEKALYYCPNTKGCPYQLQGLLKHFVHRKAMDIRSIGKQTIEMLINRGLVHTPADLYSLK 476 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASD---ERSWSQL 512 + +++ G + + ++++PF R + A+GI + L Sbjct: 477 YQDIRSLEGFKDLATRNVLSGIESSKQRPFERVLFALGIRHVGEVIADKITQYYTDIDTL 536 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 +T + +P G+ A V + EN + L L + P Sbjct: 537 SNATVEDLIAIPFIGTEIAHSVTNYFENPENLALIDVLKQAGLQLSRP 584 >UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV Length = 686 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 131/588 (22%), Positives = 232/588 (39%), Gaps = 54/588 (9%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD-V 82 A SP L+ ++ + + Y+++ E+ D YD L+ L + D Sbjct: 4 AASPDD-HARYLALRAEVARHNRAYYEQDAPEISDDEYDALARALRDMEARHPEWVEDDS 62 Query: 83 MMPPLNGA-------VMHPVAHTGVRKMVDKNALSLWMRE------------RSDLWVQP 123 + + GA V H T + + D + L W + + Sbjct: 63 PVQTIGGAPSAAFEPVAHLTPMTSLDNVFDADELREWQEKLARSLNLPPESDDFTFTGEI 122 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DG++V L Y DG L A +RGNG GE T +V I +PQ + G ++GE++L Sbjct: 123 KIDGLSVNLYYLDGTLQWAATRGNGRVGEMVTAQVLTIPGIPQHLDGLKGQLEVRGEVYL 182 Query: 184 QREGHIQQQMGG--------INARAKVAGLMMRQDDSDT-LNSLGVFVWAWP--DGPQ-- 230 R N R AG + ++D T +L ++ DG + Sbjct: 183 SRADFAAFNAQAEELGTPLLKNPRNGAAGALRQKDPEVTRTRNLKAIFYSLGRRDGVEAR 242 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARV--RNEWWKAELPFVTDGVVVRAAKE-- 286 S+ L+ LA GF ++ Y+ + A R ++ F DG V++ Sbjct: 243 TQSEVLQWLAGRGFPVSH-YSETFRGYVAAADYHRRMTEARSNFEFDADGTVIKLDPLAL 301 Query: 287 PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 E + W +A+K+ +++I VG++GK++ +A LAP +++ V + Sbjct: 302 QEEAGFTSRAPRWAIAFKFPVEQVETVLESITVNVGRTGKLAPLAHLAPRLIEGSTVSKA 361 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV-----WRGAERTKPTPPENRFNSLT 401 + + ++ D+ GD ++V +G IP+I VV + PT + +T Sbjct: 362 TLHNEDYIRQMDLRVGDTVVVRKSGGVIPQIMRVVTEKRPEKTTPFVFPTYCPECGHEVT 421 Query: 402 C-------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 Y + C Q R+ + ++ + + GIGE + +T LL Sbjct: 422 RAEGDANTYCPNPACPAQRFERIRYFVSRGAMDVRGIGEKLVIQVIETGLVRDAADLYLL 481 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 T EQL + K+ + Q ++ +P R + A+G+ A A S Sbjct: 482 TAEQLAGLERGGEKKAQNVLAQLEASKTRPLWRLINALGMTHVGERNAQALARAFGSLDA 541 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 LL +T + + +PG G A V + ++ L L A ++ E Sbjct: 542 LLRATPEQIEAVPGMGKVTAVSVSAALADPTMRNLIERLRAAGMSPEE 589 >UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0G8_ACIFD Length = 664 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 123/571 (21%), Positives = 222/571 (38%), Gaps = 43/571 (7%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 A ++ L+ I++ + Y+ + D +D L L + S Sbjct: 2 TESAAARVAALRSLIQRASEAYYVADDPIMSDDEFDGLVLELRALEAAHPELRSPDSPTE 61 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVAVT 131 V PP + V H + + D + L W+ L+ + K+DG+A++ Sbjct: 62 RVGAPPGSSFAPVRHRTPMLSLDNVFDADELDAWVERTRRGLGHDPALFFELKIDGLALS 121 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQGEIFLQREGHI 189 L Y DG+L +A +RG+G GED T ++ A+P+ + G ++GE+FL R Sbjct: 122 LTYVDGRLAQAATRGDGEVGEDVTANALVVDAIPRRLKGVTGPGLVEVRGELFLPRSAFR 181 Query: 190 ----QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQL--MSDRLKELATA 242 + + N R AG + ++D + T L F + +GP + L+ L Sbjct: 182 ALNERVERPFANPRNAAAGSLRQKDPALTRDRGLSFFAYQLEEGPSFDYHHEALQWLGEV 241 Query: 243 GFTL-TQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAA--KEPESRHWLPGQAEW 299 GF + + + E + L + DG V++ ++ W Sbjct: 242 GFQVEAHATPVGLDELADKLAWLAEA-RDGLDYDIDGAVIKVDRLEDRVRLGTTTHAPRW 300 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 ++A+K+ + + I+ +VGKSGK++ A L PV + V R + + + D+ Sbjct: 301 MIAYKFPAEERPTRLVGIEVSVGKSGKVTPFAVLDPVRVGGSTVSRATLHNADQIARLDV 360 Query: 360 APGDQILVSLAGQGIPRIDDVVWR------------GAERTKPTPPENRFNSLTCYFASD 407 GD ++V AG+ IP + V TP + + Sbjct: 361 RVGDTVIVRRAGEVIPEVVRPVLELRPDDAVPWVFPTTCPVCHTPLVRDRGEVDWRCPNR 420 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK 467 C EQ + RL+ ++ + +DG+GE R L + LT + L PG+ Sbjct: 421 RCPEQLVQRLIHFASRDAMDIDGLGEQRARQLVEAGLVVVPPDLYRLTDDDLARLPGVRH 480 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFSTEQFWQQLP 524 +L +R +P R + A+ I L A S S L TE ++ Sbjct: 481 RSIERLRAGIEASRSRPLGRVIFALAIDNVGQHVGMLVADVVGSLSGLRTVTEDELCRVE 540 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 G G A V+ ++++ +++ L + Sbjct: 541 GIGPVVAASVVAFRDSDLGREILDKLERAGV 571 >UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO Length = 678 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 118/585 (20%), Positives = 232/585 (39%), Gaps = 51/585 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVM 83 + A + I +L + Q Y K + D YD+L L +P + + Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 84 MPPLNGAV-------MHPVAHTGVRKMVDKNALSLWMRE---RSDLWVQPKVDGVAVTLV 133 + + G V H T + + L + + +L +PK+DG+A+++ Sbjct: 74 LDRVGGEVLAGFETIKHKKKMTSLANVFSLEELRDFYDKIEYDIELECEPKMDGLAISIF 133 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFLQREGHI-- 189 Y++GK + A++RG+G++GE ++ V I VP + S P ++GEI L ++ + Sbjct: 134 YKNGKFDYAVTRGDGIQGEKVSENVKTIRNVPLKLNTSNPPEELEVRGEIILDKQSFLSL 193 Query: 190 ------QQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG--------PQLMSDR 235 + N R AG + R DS + + ++++ G P+ + Sbjct: 194 NEYMQTHENKTFANPRNAAAGSI-RMLDSKVVAKRPLKLYSYGIGYFSKDFVYPETQFEL 252 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK--EPESRH 291 ++ L + GFT++ KN EV ++ +A+L + DG+V + ++ Sbjct: 253 MQLLQSFGFTISDNMF-LAKNFSEVEEYHHKMSHQRADLAYDIDGLVFKVNNIKLQDTIG 311 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 + +W +A+K+ +EV ++F VG++G I+ VA L PV + V + ++ Sbjct: 312 YTARGPKWAIAYKFPAEEVESEVLNVEFQVGRTGAITPVARLKPVAVGGVIVSNATLHNI 371 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS---------- 399 + DI GD+++V AG IP + + R ++ P N Sbjct: 372 NEIKSKDIRVGDRVIVRRAGDVIPEVVKSLPQYRKSDAQIVEMPTNCPVCDSKIENVNDQ 431 Query: 400 -LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 + CQ Q RL +++ + +D +G L + ++ L EQ Sbjct: 432 AIYRCTGGWHCQAQTTERLKHFVSRKAMDIDKLGAKLIEQLVAANLIKYPADIYKLNFEQ 491 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFS 515 L +A S + +++ R++ A+GI A+ S + Sbjct: 492 LTGLERMAAKSSQNVLDSITKSKEPSLARFIFAIGIKDIGEVSSDALANHFGSLESFRDA 551 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + ++ G A ++ + ++ K+ A I P Sbjct: 552 KFEELIEINYVGEIIANNIVSFWHDSLNIKIVEEFLAIGIKIQNP 596 >UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 Length = 720 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 132/611 (21%), Positives = 229/611 (37%), Gaps = 81/611 (13%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 SPA A E L Q+I D Y++E V D YD L R + F S Sbjct: 23 DLSPAEAASEHKALAQEITGHDAAYYREDAPVVSDAEYDALRHRYEAIEERFPGLRGEDS 82 Query: 78 EPRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPK 124 V P G V H V + + ++ +PK Sbjct: 83 LSEKVGAAPSEKFGKVAHKVPMLSLANCFSDEEVVEFVARVKRFLNLGPDDEVAFTCEPK 142 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIF 182 +DG++ +L Y +G+L A +RG+G +GED TQ V I+ +P+ ++G ++GE++ Sbjct: 143 IDGLSCSLHYENGRLTVAATRGDGSQGEDVTQNVRTIADIPERLAGKGVPQTIDVRGEVY 202 Query: 183 LQREGH--------IQQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQLMS 233 + + ++ N R AG + + D S T L F +AW + L + Sbjct: 203 MAKADFEALNARQAAAEEKVFANPRNAAAGSLRQLDSSITASRPLKFFAYAWGEASDLPA 262 Query: 234 DRL----KELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAKEPE 288 + + A GFT A A +A R+ E +A L + DGVV + Sbjct: 263 ETQFGVVEAFARWGFTTNPLMVVAKDAAGLIAHYRSIEAQRALLGYDIDGVVYKVNSLEL 322 Query: 289 SR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 R ++ W +A K+ ++ I+ VG++G ++ VA L PV + V Sbjct: 323 QRRLGFVSRSPRWAIAHKFPAEQATTVLEDIEIQVGRTGALTPVAKLTPVTVGGVVVSSA 382 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA-------ERTKPTPPE----- 394 + + D+ GD ++V AG IP++ V+ E P Sbjct: 383 TLHNEDEIARKDVRIGDTVVVQRAGDVIPQVVRVIEEKRPAGSKPYEFPTHCPACGSHAV 442 Query: 395 -------NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEH 447 + +++ +C Q + RL ++ ++G+GE RA ++ Sbjct: 443 REVDTKSGKVDAVRRCTGGLICPAQMVERLRHFVSRNAFDIEGLGEKQVRAFYEWGLIAS 502 Query: 448 IFSWLLL------TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL 501 L + ++L+N G K+ +A L+ R R+V A+GI Sbjct: 503 PADIFTLETRNARSLQRLENRDGWGKTSAANLFAAIAERRTVAVDRFVFALGIRHVGETN 562 Query: 502 NASDERSWSQLLFSTE----------------QFWQQ---LPGTGSGRARQVIEWKENAQ 542 R + + + WQ+ + G G A VIE+ + Sbjct: 563 AKRLMRHYGTVEALEAGALAAVIPGEEHPKGNEAWQEMIGIDGIGDVVAEAVIEFFGEPR 622 Query: 543 IKKLGSWLAAQ 553 +++ + L + Sbjct: 623 NREVVTALLKE 633 >UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_LACLM Length = 686 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 119/604 (19%), Positives = 226/604 (37%), Gaps = 78/604 (12%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVM 83 + +I L Q+ Q+ +Y+ + VED YD L L + ++ S Sbjct: 3 IESKIKELTDQLNQFAYEYYTLDEPSVEDSEYDHLYHELVKLEQENPQLVRADSPTHRTG 62 Query: 84 MPPLNGAVM--HPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVYR 135 L+G V HP + + + L+LW + + K+DG++++L Y Sbjct: 63 GVILDGFVKFRHPYNLYSLGDVFSREELALWEERVRKEIVNPEYICELKIDGLSLSLYYE 122 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG- 194 +G L A +RG+G GE+ T+ V I VP + + + ++GE +L R+ + Sbjct: 123 NGLLVTAATRGDGTTGENITENVKRIKDVPLKLKEAI-DIVVRGEAYLPRQNFAKLNAER 181 Query: 195 -------GINARAKVAGLMMRQDDSDTLNS-LGVFVW--AWPDGPQLMSDRLKELATAGF 244 N R AG + + D L F++ A P + L+ GF Sbjct: 182 ELEGAAPFANPRNAAAGTLRQLDTKIVAKRGLATFLYQEASPATNDTQEEVLEYFEELGF 241 Query: 245 TLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWL 300 + + +N DE+ E + ELP+ DGVV++ E + W Sbjct: 242 QVNPE-RKFARNLDEIWEFIEEATRLRDELPYDIDGVVIKVNNLAEQEELGFTVKAPRWA 300 Query: 301 VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA 360 +A+K+ E+ ++ + VG++G ++ A++ V+L V R + +V QE DI Sbjct: 301 IAYKFPAEQAETEILSVDWTVGRTGVVTPTANMTAVLLAQTTVARATLHNVDYIQEKDIR 360 Query: 361 PGDQILVSLAGQGIPRIDDVVWRGAE---------------------------------- 386 D++++ AG IP++ V+ + Sbjct: 361 NHDKVMIYKAGDIIPKVGKVLLEKRKPARHLRKTHRANKYVWTRFGRRSVEKGLVFSKRE 420 Query: 387 ---RTKPTPPENRFNSLTCY-------FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 PT + L + + +C Q +L+ ++ + + G+G + Sbjct: 421 DNRVKIPTQCPECDSDLIHFEDEVALRCVNPLCPAQIREKLIHFASRDAMNIVGLGPSVI 480 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 L + LT E L + ++ + ++ +R+ + + +GI Sbjct: 481 SQLFDKKLVTDVADLYQLTVEDLLTLDKVKETLAQKIVSAIAQSRENSAEKLLFGLGIRH 540 Query: 497 TR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 A L + L ++E+ ++P G A V+ + E A K L L Sbjct: 541 VGGKAAKLLLERFANLRALSQASEEEISEIPSLGGVIATAVVSYFETAGAKTLLDELENA 600 Query: 554 QITG 557 + Sbjct: 601 GLNF 604 >UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW Length = 698 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 128/595 (21%), Positives = 215/595 (36%), Gaps = 67/595 (11%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 P QE + L+Q + + Y+ ++ED VYD+L L + S + Sbjct: 4 PQGLQERAAELRQLLNRAAHAYYVLDAPDLEDSVYDRLYRELLDLEAAHPELVEADSPTQ 63 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDL----------------WVQ 122 V P G +V H + + L W + + Sbjct: 64 RVGGSPAEGFRSVTHRIPLFSLDNAFSAEELRGWYTRLLKVLDREPPSGSPLPALAMVGE 123 Query: 123 PKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGE 180 K+DG A+ L Y +G L +A +RG+G +GED T V I+++P + P A ++GE Sbjct: 124 LKIDGNALALSYDNGVLVRAATRGDGDQGEDITANVRTIASIPLRLHLDPPPAWVEVRGE 183 Query: 181 IFLQREGHI--------QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAW------ 225 + + + N R AG + + D L F + Sbjct: 184 ALIPDNTFAAINSERAARDEPLFANPRNACAGTLRQLDPKVVAARRLDFFAYTLHLPEDW 243 Query: 226 -PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVR 282 + P + L+ L AGF + + + D V + +W + +L + TDGVVV+ Sbjct: 244 SGERPTSQWESLRWLEDAGFRVNPNAA-LLPDVDSVEQFFGDWDSRRHDLNYATDGVVVK 302 Query: 283 AAKE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 ++ + W +A KY + + + VG++G ++ VA PV L Sbjct: 303 LNDLRLQDAAGFTQKAPRWAIALKYPAEEAPSRLLKLTCQVGRTGVVTPVAEFEPVSLAG 362 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSL 400 V R + + R QE D+ GD I+V AG+ IP + V+ P E Sbjct: 363 TSVSRATLHNADRLQELDLHSGDTIIVRKAGEIIPEVLRVLPELRPEGA-LPLELPQQCP 421 Query: 401 TC-------------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEH 447 +C + C L +K L +DG+G L + Sbjct: 422 SCGSDLVRESGEAATRCVNSSCPAILSGALRHWVSKGALDVDGLGSKLIEQLVERGLVRS 481 Query: 448 IFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNAS 504 I L L + + + + L +R QP++R + +GI A AS Sbjct: 482 IADLYRLDTALLTSLERMGEKSAGNLVAALAQSRTQPWSRQLYGLGIHHVGEVNAKALAS 541 Query: 505 DERSWSQLLFST---EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 L + + L G G A+ + +W + + L L A +T Sbjct: 542 AFADAHSLADAAVQRPEAITDLHGIGPEIAQSLQQWFNTSANQDLLQQLRAVGLT 596 >UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C335E5 Length = 682 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 129/582 (22%), Positives = 226/582 (38%), Gaps = 53/582 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + Q+ I +L++ ++Q + Y +S +ED VYDQL +L ++ S Sbjct: 1 MNNLNIQKTIIKLRKHLQQANYAYHVLNESIMEDSVYDQLYRQLYNLEQRNPNLISSDSV 60 Query: 79 PRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRERSDL-----------WVQPKV 125 + V P +V H + + + L W + K+ Sbjct: 61 TQRVGEKPALHFNSVKHDIPLYSLENAFNLQELEAWENRNQKYLKSQENQLIKYIAELKI 120 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFL 183 DG A++L Y +G L + ++RG+G+ GED TQ + I ++P + P + + GE FL Sbjct: 121 DGSALSLTYENGLLTRGLTRGDGIVGEDITQNIRTIFSIPLHLNLDDPPSIMHVNGEAFL 180 Query: 184 QREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWA-WPDGPQLMS 233 + + N R AG + + D L F ++ + D + S Sbjct: 181 PLDEFKRINKQKQKEGKSLFANPRNAAAGTLRQLDSKIVSERKLQFFAYSLYADNLDIKS 240 Query: 234 --DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES 289 D LK L GF L Y R K+ D V NEW K LP++TDGVV++ Sbjct: 241 QWDTLKFLQECGF-LVNPYYRLCKSLDTVTNYFNEWKSAKKHLPYMTDGVVIKINSHILQ 299 Query: 290 RH--WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 + + W +A KY V+ I F G++G ++ +A + PV+L V++ Sbjct: 300 KELAYTQRFPRWAIALKYPAEEISTVVEDIIFNTGRTGAVTPMAVMNPVLLGGTIVRKAT 359 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-------TKPTPPENRF--- 397 + ++ R + I GD + + AG+ IP + V+ ++ P N Sbjct: 360 LHNIDRIAQLGICIGDTVTIRKAGEIIPEVIRVLKTLRHHKTKVFQISERCPKCNSMLVS 419 Query: 398 --NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 N ++ C L+ ++ + + G+GE L I L Sbjct: 420 FSNEAVVRCINNSCPAILKGNLIHWSSRDAVDISGLGEKIIDLLISNGLVNSISDLYHLN 479 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 +++ N + + L ++ + +T+ + +GI A L + S QL Sbjct: 480 FQEVSNLERMGIKSAENLIKSIESSKTKSWTKVLYGLGIHHVGYTTAILLTENFSSVQQL 539 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQ 554 L + + G G A + W + +KL S L Sbjct: 540 LQAPYDTLVTIKGIGKEVAYSIRSWFSLEENQKLISELDKNG 581 >UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 Length = 669 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 122/575 (21%), Positives = 237/575 (41%), Gaps = 54/575 (9%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPP 86 I L++ +++ + Y+ ++D YD + +L + +R + S V Sbjct: 10 RIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVGSDK 69 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYRD 136 G +V H + + + + + R S+ + + K DG++++L+Y D Sbjct: 70 TEGFASVRHDRPMLSLSNTYNYDEIGDFYRRVSEGLQGAPFEIVAELKFDGLSISLIYED 129 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN--STLQGEIFLQREGH----IQ 190 G L +A++RG+G+ G+D T V I +VP + G ++GEI L + Q Sbjct: 130 GMLVRAVTRGDGIMGDDVTANVRTIRSVPLRLRGDDYPRMLEVRGEILLPFKEFDRINAQ 189 Query: 191 QQMGG----INARAKVAGLMMRQDDSDTL-NSLGVFVWA-WPDGP--QLMSDRLKELATA 242 ++ G N R +G + + D +L + + + D P + DRL + Sbjct: 190 REAEGEPLFANPRNAASGTIKQLDPHIVAGRNLDAYFYYLYSDEPLAENHYDRLMQARQW 249 Query: 243 GFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAE 298 GF ++ T + ++V + + + LP TDG+V++ + + Sbjct: 250 GFKVSDAVTLCC-SKEDVYAFIDRFDTERLTLPVATDGIVLKVNAPAQQDLLGFTAKSPR 308 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W +A+KYQ ++ + + VG++G ++ VA+L PV++ V+R ++ + E D Sbjct: 309 WAIAYKYQAERVRTRLQHVSYQVGRTGAVTPVANLDPVLISGTVVRRASLHNADFIAEKD 368 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRG--------------AERTKPTPPENRFNSLTCYF 404 + GD + V G+ IP+I V + P E + C Sbjct: 369 LHEGDFVYVEKGGEIIPKIVGVDTDARSIDGRPIVFTVLCPDCATPLVREQGEAAYYCPN 428 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 A + C +Q RL ++ ++ IG L+ + ++ + LT EQL PG Sbjct: 429 A-EGCPQQQKGRLEHYCGRKAADIN-IGPETIELLYSRNMIRNVADFYALTEEQLLTLPG 486 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 K +A+L ++ +P+ + +GI A A+ S L +T + Sbjct: 487 FKKRAAAKLLDSIEASKARPYQAILFGLGIRFVGETVAKKLAAVYPSIDALAAATSEELV 546 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 Q+ G A V+ + Q ++L L ++ Sbjct: 547 QIDEIGERIAAAVLHFFSLRQNRELIERLRLAGVS 581 >UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_HALWD Length = 736 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 123/574 (21%), Positives = 235/574 (40%), Gaps = 42/574 (7%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-----GSEP 79 S A E+ ++L++ I++ D Y+ + D YD L RL + F S Sbjct: 69 LSEEAAVEQATQLREAIREHDYQYYIRASPIIADRAYDILFDRLQALEDIFNLDTEASPT 128 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVT 131 R V PL+ V H + + + +++ + + +PK DG++V Sbjct: 129 RRVGGEPLDELETVEHVTSMLSIDQSTAVDSVRDFDERVRDVVGDLEYICEPKFDGLSVE 188 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN-STLQGEIFLQREGHIQ 190 ++Y DG+ +A +RG+G +G+D T +V + AVP + G + ++GE+++ + G + Sbjct: 189 VIYEDGEYIRAATRGDGNRGDDVTAQVETVGAVPLKLHGDYPSYLAVRGEVYMPKAGFRE 248 Query: 191 Q--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQLMSDR---LKE 238 + N R AG + + D L F + D +L D+ L + Sbjct: 249 YNRERIECDEKPFANPRNAAAGTLRQLDPGVVAERPLSCFFYDILDATELPPDQWTTLND 308 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAK--EPESRHWLP 294 L + G +R V + D+ R++ +AEL + DG V++ E Sbjct: 309 LQSWGLRTNDRISR-VDSIDDAIAYRDQLKAARAELNYEIDGTVIKVNDRGNREILGATS 367 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 W A+K+ P A++ + I VG++G+++ VA L PV + V R ++ + Sbjct: 368 RSVRWAFAYKFPPRAEITHITDIVVQVGRTGRLTPVALLDPVDVGGVTVSRASLHNPEEI 427 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP--------PENRFNSLTCYFAS 406 + + GD++ V AG IP + +V + A T P + L Sbjct: 428 KRLSVNSGDEVRVRRAGDVIPEVAEVTQKRATGTFNFPNQCPICHSSVEQDGPLAFCTGG 487 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIA 466 C Q + +V G++ L +DG+GE L ++ + L+ L G Sbjct: 488 LTCDAQLVRTIVHYGSRSALDIDGLGEQRVEQLVESGVIGELADLYTLSVADLSKLDGWG 547 Query: 467 KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQL 523 + + L + + T +++ +GIP A A ++ ++ + E +++ Sbjct: 548 TTSAENLIQAISETQTPSLTDFLVGLGIPEVGPTIARNLAGTFDNFDAIIDADEAALREI 607 Query: 524 PGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 G + + E+ N Q + L + +T Sbjct: 608 EDIGPTVSTHISEFFTNEQNRAAIDNLLSAGVTP 641 >UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA Length = 567 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 246/564 (43%), Positives = 355/564 (62%), Gaps = 10/564 (1%) Query: 1 MKVWMAILIGILCWQSSVWAV--CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVED 58 +K+ M +LI WA CP W R EI+ L+QQ+ +W Y ++G S V D Sbjct: 6 LKIIMFLLISNTIVVGGAWATSTCPDWPATRIAVEINALEQQLNKWSAAYHQQGHSPVTD 65 Query: 59 GVYDQLSARLTQWQRCFGSEPRDVMMP-PLNGAVMHPVAHTGVRKMVDKNALSLWMRERS 117 +YDQL +L WQ C G + P P G +HPVAH+G++K+ D+ AL+ WM R Sbjct: 66 DIYDQLQDKLRVWQSCRGLPDKTESQPIPGKGQFLHPVAHSGLKKLKDETALTRWMAGRK 125 Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL 177 +LWVQPKVDGVAVTLVY GKL + +SRGNG+KG++WT+K ISA+PQ ++ A TL Sbjct: 126 NLWVQPKVDGVAVTLVYHGGKLVQLLSRGNGVKGQNWTEKAPFISAIPQYIANAPALLTL 185 Query: 178 QGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLK 237 QGE+FL +GH Q + GG+NAR+ VAG +MR+ S L +GVF+WAWPDGP M +++ Sbjct: 186 QGELFLLMDGHQQAKSGGVNARSTVAGALMRKSPSPLLAQVGVFIWAWPDGPTTMKEKVA 245 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQA 297 L GF T Y+ V + +V + R W++A LPFVTDGVVVR +EP R+W Sbjct: 246 LLQVMGFPFTAKYSEPVMSHLDVVQWRQFWFQAPLPFVTDGVVVRQEEEPAGRYWQATPG 305 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 +W +AWKY P+ +AEVK I F +G++GK +VV + P+ +DDK ++RVNIGSV RW++W Sbjct: 306 QWSMAWKYPPLQHIAEVKDIHFTLGRTGKGTVVLEVLPIKIDDKWIRRVNIGSVTRWKQW 365 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE-NRFNSLTCY-FASDVCQEQFIS 415 DIAPGD I ++LAG GIPR+D+VVWR +R T P ++F+ L+C+ C+ QF+S Sbjct: 366 DIAPGDHITLALAGHGIPRLDNVVWRVHQRNTITAPNWDKFHQLSCFQRLPHGCEPQFLS 425 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWH 475 RL+WL L + GIG W+ L + WLLLTPEQ+ + PGI +++ +++ Sbjct: 426 RLIWLSGPGGLDIGGIGGGFWQELIHHELINDLVGWLLLTPEQIASIPGIGNARAEKIYQ 485 Query: 476 QFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVI 535 QF A++QPF+RW++A+G P S + W +L + W + G G RA+Q+ Sbjct: 486 QFQRAKQQPFSRWLLALGFPQV-----VSVDAQWQVVLRRSLSEWATMAGIGQMRAKQIK 540 Query: 536 EWKENAQIKKLGSWLAAQQITGFE 559 + ++ ++ L +L+ Q++ GFE Sbjct: 541 HFLDHPDVQALADFLSTQKVVGFE 564 >UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP Length = 768 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 116/640 (18%), Positives = 218/640 (34%), Gaps = 102/640 (15%) Query: 15 QSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC 74 A P A A + L+ ++ Y+ E+ D YD+L L + Sbjct: 21 VGPASAAPPDLQTAAA--RAAWLRSTLQHHAHLYYVLDAPELPDAEYDRLFQELQAIEAM 78 Query: 75 FG------SEPRDVMMPPLNGAV--MHPVAHTGVRKMVDKNA-----LSLWMRERSD--- 118 + S + V+ +G V H V +R D A +R + Sbjct: 79 YPALRTADSPTQRVLGQVRDGFVVVRHAVPMLSIRTETDTEASGAVAFDARVRRELELPD 138 Query: 119 ------LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL 172 + K DG+A+ L Y G L +A +RG+G GED TQ + I +P + Sbjct: 139 DAPPISYATELKFDGLAINLRYEHGVLVQAATRGDGESGEDVTQNIRTIGQIPLRLRWAP 198 Query: 173 --------------------------------ANSTLQGEIFLQREGHI----------- 189 A ++GE++++R+ Sbjct: 199 TLGADAHSLPPEGARFALGRPGGETGAPDLAPAVLEVRGEVYMRRDDFEALNERQRERIA 258 Query: 190 ---QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG-----PQLMSDRLKELA 240 + + +N R AG + + D + L F + + P + L LA Sbjct: 259 RGDKGEKTFVNPRNAAAGAVRQLDPAIAAQRPLSFFAYGLGEVQGWALPHTHAGLLDALA 318 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE--PESRHWLPGQ 296 AG + V+ AD + + L F DGVV + + ++ + Sbjct: 319 AAGLPVCAERA-VVQGADGLVAFHQRIGALRDSLAFDIDGVVYKVDSLALQQRLGFVTRE 377 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W VA KY Q+ + I+ VG++GK++ VA L PV + V + + + Sbjct: 378 PRWAVAHKYPAQEQMTRLLGIEIQVGRTGKLTPVARLEPVFVGGTTVSNATLHNEDEARR 437 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE----NRFNSLTC---------- 402 D+ GD ++V AG IP++ VV P + C Sbjct: 438 KDVRVGDTVIVRRAGDVIPQVVGVVLEQRPDDVGEPFDLYQRLGGRCPVCGSAIARPEGE 497 Query: 403 ----YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 C Q ++ +++++ ++G+G+ L + L + Sbjct: 498 ADWRCTGGLFCAAQRKQAILHFASRRMMDIEGLGDKLVDQLVDAGVIRTLPELYKLGVAK 557 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 L + + + L +++ R++ ++GI A A + +++ + Sbjct: 558 LTALERMGEKSAVNLVAALEKSKQTTLARFLFSLGIRQVGEATAKALARHFGALDRVMDA 617 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + Q +P G A + + + +++ L A I Sbjct: 618 SVDQLQAVPDVGPIVALSIRTFFDQPHNREVVEQLRAAGI 657 >UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVH Length = 799 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 118/597 (19%), Positives = 210/597 (35%), Gaps = 59/597 (9%) Query: 17 SVWAVCPA---WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR 73 + A PA P A++ ++L+ +++ + Y++ E+ D YD L L + Sbjct: 23 AAEATSPARHDAIPEEARQRAAQLRADLERHNRLYYELDTPEISDAEYDALYRELVGLET 82 Query: 74 CFG------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD------- 118 + S + V L G H + + ++ +++ + Sbjct: 83 RWPALRDEASPTQRVGGEVLEGLEKQAHTLRMYSLDNAFSRDEWGAFIQRMYNALPDAPS 142 Query: 119 -LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANS 175 W PK+DG+A+ ++Y +G A++RGNG GE T + + +P + G Sbjct: 143 AFWCDPKMDGLALEVIYENGVFTSALTRGNGEVGEVVTAAMRTVRNLPLALRGDDVPRRI 202 Query: 176 TLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP 226 ++GE+ + + Q N R AG + + D + T L + Sbjct: 203 EVRGEVVIAKADFEQLNARQSAAGGKLFANPRNAAAGSVRQLDTTVTAGRPLQFLAYGVG 262 Query: 227 DGP--------QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVT 276 S + L GF R + DEV + L Sbjct: 263 QVVLEGGTAPWTTHSGLMARLREWGFDTPPE-GRLCASPDEVWAYYEALGARRESLAIEI 321 Query: 277 DGVVVRAAKE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DGVV + E+ + W +A K+ + + I+ VG++G ++ VA L Sbjct: 322 DGVVAKLDDTEAQEALGFTARAPRWALALKFPAMQARTRLDDIRVQVGRTGVLTPVAILE 381 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDD--VVWRGAERTKPTP 392 PV + +V R + + + + GD +LV AG IP + V R + Sbjct: 382 PVRVGGVEVSRATLHNEDEIRAKGLMLGDMVLVQRAGDVIPEVVRPLVEERTGDERPFVF 441 Query: 393 PENRFNS----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 PEN + + +C ++ +K L + G+GE + L Sbjct: 442 PENCPECDSPVVRPQGEVAHRCVNVMCPAVRRQSIIHFVSKAGLDVRGVGERWVQQLVDG 501 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARK-QPFTRWVMAMGIPLTR--- 498 LLT L + + +A + AR R + A+GI Sbjct: 502 GHVTSPVGLFLLTKLDLMRFERMGPTSAANFVTALDAARTGATLVRLICALGIRHVGEQT 561 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 A A++ L + + QQLP G A + + N +L L A + Sbjct: 562 ARTLAANFTDLDALREADAETLQQLPDIGPEVAGSIRSFFANEGNLELLERLRAIGL 618 >UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKI9_9FIRM Length = 675 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 118/584 (20%), Positives = 241/584 (41%), Gaps = 52/584 (8%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE-PRDVMM 84 S + ++E++ L++ I+ ++ Y+ E E+ D YDQL RL + + ++ Sbjct: 9 SIQQVKKELTELRKTIRYHNNRYYNEDNPEISDYEYDQLMLRLKAIEAKYPELITKNSPT 68 Query: 85 PPLNGA--------VMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAV 130 + G V H V ++ + K + ++ E + V+ K+DG+++ Sbjct: 69 QVVGGQARRTAGVLVKHDVPMLSLQDVFSKEEIFAFVEELQQELEAPEFVVEEKIDGLSM 128 Query: 131 TLVYRDGKLNKAISRGNGL-KGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH- 188 L Y DG+L +AI+RG+G+ +GED T+ +I V + + L ++GE++++++ Sbjct: 129 ALRYEDGELVRAITRGDGIVQGEDVTENAKVIHDVKKKLKDKLPYFEIRGEVYMEKKAFD 188 Query: 189 ---IQQQM----GGINARAKVAGLMMRQDDSDTL-NSLGVFVW----AWPDGPQLMSDRL 236 +Q++ N R AG + + D T L +F++ A ++ Sbjct: 189 AVNARQELLGLKPFANPRNCAAGTLRQLDSRITKERHLSLFIFNLQTARGRTFTTHTEAY 248 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP--ESRHW 292 + G + Y + ADEV + + LP+ DG VV+ E Sbjct: 249 DFMKKQGIKVIHGY-KVCHTADEVWQAITAIGENRGNLPYDIDGAVVKLNNLADREKLGA 307 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W +A+KY P + ++ I+ +VG++G+I+ A P+ L V+R + + Sbjct: 308 TAKVPRWAIAYKYPPEEKETVIRKIELSVGRTGRITPTAVFDPIRLCGTTVERATLHNQD 367 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVV-WRGAERTKP-----TPPENRFNSLTCY--- 403 D+ GD + V +G+ IP++ +VV + T+P T P ++ Sbjct: 368 FIDNLDVRIGDTVRVYKSGEIIPKVKEVVKEKRPAGTEPFVIGTTCPVCGAPAVREPDTS 427 Query: 404 ---FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQ 458 + C Q S ++ + + + G+GEA L + I L E+ Sbjct: 428 DIKCKNPSCPAQLESHILNFVGRSAMDIKGLGEAAIHRLIEDGFIATIADLYRLGGKREE 487 Query: 459 LQNTPGIA-KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNAS---DERSWSQLLF 514 L I + + ++ +++ R + +GIP S L Sbjct: 488 LIEKGIIGKEKNTDKVLAAIEASKENEPQRLLTGLGIPGIGRTAARELMLHFGSIDALAK 547 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 ++E+ ++ G A+ ++++ + +K+ + A + Sbjct: 548 ASEEEILEVRDMGEISAKAIVQYFNDPASQKILAAFRAAGVNFT 591 >UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=DNLJ_NITSB Length = 660 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 119/575 (20%), Positives = 240/575 (41%), Gaps = 54/575 (9%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 +E +++K+W Y+ EV D VYD+L + ++++ S + + Sbjct: 6 QEYKEAVEKLKRWAYAYYVLDNPEVPDEVYDKLYREVEEYEKAHPDQIDPTSPTQRIGAE 65 Query: 86 PLN--GAVMHPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGVAVTLVYR 135 P + H + + ++ + W+ R+ +++PK DG ++ L+Y Sbjct: 66 PAKEFKKIKHLSKMWSMEDVFNQREMHEWLERVYKNAGRKDLQFYIEPKFDGASLNLIYE 125 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH------- 188 +G L A +RG+G GED T I ++P + ++GE+ ++++ Sbjct: 126 NGLLKSAATRGDGEVGEDVTANAKTIPSIPLGIDYK-GLIEIRGEVVIRKDDFEKLNHER 184 Query: 189 -IQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQL-----MSDRLKELATA 242 ++ + N R AG + + D T ++ + W G +++ + Sbjct: 185 ALKGESTFANPRNAAAGSLRQLDPKVTA-QRKLYFYPWDIGYNTLNFKYQHEKMDFVYQQ 243 Query: 243 GFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRHWLPGQAE 298 GF + +N +E+ ++ E+ + +LP + DG+VV+ + E + Sbjct: 244 GF-IKPFKRAICENEEEIQQLYEEFSKERDKLPVMLDGMVVKVDEIALHEILGYTVKYPR 302 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W+VA+K+ V ++ + I VG++G I+ VA L PV ++ V+R + + + D Sbjct: 303 WMVAYKFPAVEKMTRIIDIVPQVGRTGVITPVAILEPVEIEGVVVERATLHNYAEIERKD 362 Query: 359 IAPGDQILVSLAGQGIPRIDDVV-------WRGAERTKPTPPENRF---NSLTCYFASDV 408 I GD ++V +G IP + V+ + ER K P + + + Sbjct: 363 IRIGDMVIVIRSGDVIPEVTKVLTQYRTGKEKKVERPKVCPVCGQPVLDEGILIKCQNLS 422 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKS 468 C + ++ +++ +KQ L + G+GEA + L++ + + L E L PG A+ Sbjct: 423 CPARVVNSIIYFASKQCLDISGLGEATVKLLYEKGLVKDVVDLFKLKKEDLLRLPGFAEK 482 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWS-QLLFSTEQFWQQLPGTG 527 K+ L + R+V A+GI + + + ++ ++ G G Sbjct: 483 KAQNLIDATQSVKGVECWRFVNALGIEHIGEVASKKLCEKFGLDWYKAPKEKLYEIEGFG 542 Query: 528 SGRARQVIEWKE--NAQIKKLGSWLAAQQITGFEP 560 R + E+ E +I+KL L EP Sbjct: 543 PEMVRSIEEFVEVNKEKIEKLIELL-----QPTEP 572 >UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA Length = 771 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 129/585 (22%), Positives = 225/585 (38%), Gaps = 53/585 (9%) Query: 23 PAWSPARA-QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPR 80 PA + + A + + L +++ + Y+ V D YD+L LT + Sbjct: 51 PAVAASVADRARAAELARELDEHAYRYYVLDSPTVSDAEYDRLMRELTALEEHHPELRTP 110 Query: 81 DVMMPPLNGA-------VMHPVAHTGVRKMVDKNALSLWMR------ERSDLWVQPKVDG 127 D + G+ V H + + D + LW E + K+DG Sbjct: 111 DSPTQKVAGSYSTLFTPVEHLERLLSLDNVFDDDEFHLWAARAARETEVDGWLCELKIDG 170 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQR 185 +AV LVY +G+L +A +RG+G GED T + +++VP + G ++GE+F Sbjct: 171 LAVDLVYEEGRLVRAATRGDGRTGEDITPNIRTLASVPTRLRGASVPELLEVRGEVFFPT 230 Query: 186 EGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLM 232 E + N R AG + ++D T L + V Sbjct: 231 EKFAELNASLVAGGGKPFANPRNAAAGSLRQKDPRVTATRPLDMIVHGLGAQRGFDAASQ 290 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWK--AELPFVTDGVVVRAAKEPESR 290 S A G ++ T+ + + +V + W + ++ DGVVV+ R Sbjct: 291 SAAYARFAEFGLPVS-THFEVLASVGDVLAFIHRWGRARHDVEHEIDGVVVKVDAFALQR 349 Query: 291 --HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 W VA+KY P +++ I+ VG++G+++ L PV++ V + Sbjct: 350 RLGSTSKAPRWAVAFKYPPEEVTTKLRDIRVNVGRTGRVTPFGELEPVLVAGSTVGLATL 409 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK-----PTPPENRFNSL--- 400 +V + GD +++ AG IP I V + T+ PT L Sbjct: 410 HNVDEVGRKGVLIGDTVVLRKAGDVIPEIVGPVVDLRDGTERAFVMPTHCPECGTELVRP 469 Query: 401 ------TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 C +D C Q + L ++ L +DG+G AL + R I L Sbjct: 470 EGEVDIRCPN-TDACPAQLRELIFHLASRNALDIDGLGYETAIALLEADRVGDIGDIFHL 528 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 TPE + G + K Q+ AR +P R ++ + I A A + RS Sbjct: 529 TPESFEGLRGFGQKKIDQILRGVEAARHRPLWRLLVGLSIRHVGPTAARALARELRSLDA 588 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 + + + + G G A V++W +A+ + + + +AA + Sbjct: 589 IAAAPAEQLAAVEGVGPKIASAVVDWFADARHRDIVARIAAGGAS 633 >UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NYF9_9DELT Length = 678 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 121/568 (21%), Positives = 210/568 (36%), Gaps = 54/568 (9%) Query: 39 QQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE-PRDVMMPPLNGA------- 90 + I + Y+ E+ DG YD+L L + + + D + GA Sbjct: 22 ELIAYHNHRYYVLDDPELSDGEYDRLFRELEELESRWPELVTADSPSRRVGGAAAEQFAP 81 Query: 91 VMHPVAHTGVRKMVDKNALSLWMRERSDL----------WVQPKVDGVAVTLVYRDGKLN 140 V H V + + L + + +PK+DG+AV LVY G Sbjct: 82 VRHAVPMLSLENAFAEAELYDFENRLRRFLNLDDQPIAYYAEPKLDGLAVELVYEQGFFT 141 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGH--------IQ 190 +RG+GL GE+ + + I +P + G A ++GE+ L G Sbjct: 142 LGSTRGDGLVGENISANLKTIDDIPIRLRGEQAPARLDIRGEVCLTVAGFTALNEQRAQN 201 Query: 191 QQMGGINARAKVAGLMMRQDDSD-TLNSLGVFVWAWPDGPQL----MSDRLKELATAGFT 245 + N R AG + + D + L F + D L ++ LA GF Sbjct: 202 GESLFANPRNAAAGSLRQLDPAISAARPLEFFAYGVADADPLAVGSQQQVIELLAALGFK 261 Query: 246 LTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHWLP--GQAEWLV 301 T + + V + +++LP+ DG+V + + + W + Sbjct: 262 -TIPHGHLCPDLAAVIAHFQQLAQRRSQLPYEIDGMVAKVNELALQKRLGSKTRTPRWAI 320 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 A K+ V + A+++ VG++G ++ VA L PV + V R + + + D+ Sbjct: 321 AAKFPAVQATTRLLAVEYQVGRTGAVTPVARLEPVTVGGVTVSRATLHNEAEIRRKDLRL 380 Query: 362 GDQILVSLAGQGIPRIDDVVW-----RGAERTKPTPPENRFNSLTCY-------FASD-V 408 D +LV AG+ IP + + R E T PT + L + Sbjct: 381 EDTVLVQRAGEVIPEVVKPLAEKRNGRQREITLPTHCPECGSQLIRPAAEVVLRCPNHRH 440 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKS 468 C Q + L+ K L ++G+G+ L I L QL PG + Sbjct: 441 CPAQRLRALIHFCGKAGLDIEGLGQKVLEQLTAAGLVGDIPDIFRLRAAQLAPLPGWGEK 500 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPG 525 K+A + N R+ R + A+GI A L A + LL + E+ + + G Sbjct: 501 KAANVIAAVNRRRRVELGRLLAALGIRHIGEVTAQLLARRFGTLEGLLAAGEEDFLDIEG 560 Query: 526 TGSGRARQVIEWKENAQIKKLGSWLAAQ 553 G A ++ + +++ L + Sbjct: 561 IGPQAAAALVTYFAAPGNREILRQLQEE 588 >UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30ED5 Length = 684 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 123/590 (20%), Positives = 221/590 (37%), Gaps = 57/590 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S + + L++++ Y+ E+ D YD L L + S Sbjct: 1 MSAGPDAQRAAVLRRELAYHGHRYYDLDDPEIGDDAYDALLDELRALEAAHPELLTPDSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-------------RSDLWVQP 123 + V ++ V H + + L W+ R + V+P Sbjct: 61 TQRVGGAVVSELRKVRHRRRMLSLANARSEQELLAWVERMRAHLAREGIEDPRFEYVVEP 120 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 KVDG+A++L Y +G L + ++RG+G GED T + I +PQ + G A ++GE+++ Sbjct: 121 KVDGLAMSLHYENGTLIRGVTRGDGEIGEDVTHNIRTIEQIPQQIDGAPAWLEVRGEVYM 180 Query: 184 QREGHI--------QQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQ----- 230 + + +N R AG + RQ DS + +W + G Sbjct: 181 SLADFEALNLRRAEEGRSTFMNPRNSAAGTI-RQLDSRLAAERPLSMWCYGIGETEGISF 239 Query: 231 -LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP 287 + L+ L GF + R ++ A++V W + L F DGVVV+ Sbjct: 240 STHWESLQWLRAHGFPVNDEIRR-IRTAEKVVARCERWQERRGSLDFEIDGVVVKVDDVE 298 Query: 288 ESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 R + W +AWK+ P V ++ + + VGK G + A L PV + V+ Sbjct: 299 LQRRLGVVGRDPRWAIAWKFPPTTAVTQLHDVMWNVGKFGTLHPFAVLEPVHVGGVTVKL 358 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP------------- 392 + + D+ PGD ++V AG IP++ AER+ P Sbjct: 359 ATLHNEEDLARKDVRPGDDVIVLRAGDVIPQVLSPAPHVAERSDRAPVPRPPARCPVCDT 418 Query: 393 PENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 P + + + C + L ++ + +DGIGE L + + Sbjct: 419 PTVKGEGVFTKCPNRDCPGRRWQLLQHYVSRGAMDVDGIGEKQVSVLMEHGLLRTPGDYY 478 Query: 453 LLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSW 509 L+ EQL + + ++++PF R + +GI + A R+ Sbjct: 479 RLSAEQLMQLDRFGEVSARNAVEAIAASKERPFGRVLFGLGIEGVGSVTGRSLAQRFRTI 538 Query: 510 SQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 L ++ + PG G R + + + ++ + L A + E Sbjct: 539 DALTAASAEEIAATPGIGPIVGRLIHDQLRDEHLRAVIDDLRAHGVRMEE 588 >UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIGB_PSEPW Length = 567 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 211/546 (38%), Positives = 326/546 (59%), Gaps = 7/546 (1%) Query: 17 SVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 + + CP WS +A+ E+++L+ + WDD Y ++G + V D +YDQ L Q+CFG Sbjct: 18 AQASHCPDWSTKQARTEVAQLRATLANWDDHYHRQGIALVADELYDQARHHLLHLQQCFG 77 Query: 77 SEPRDV-MMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYR 135 E D + G + HPVAHTGV K+ D A++ WM + +WVQPKVDGVAV+LVYR Sbjct: 78 QEFTDPSPLASARGPIAHPVAHTGVEKLHDAAAVARWMTGKKGVWVQPKVDGVAVSLVYR 137 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 G+L + +SRG+GL+G DW++ + + ++ + + PL + LQGE++L+ + H+Q + G Sbjct: 138 QGRLVQLLSRGDGLQGHDWSRHIKDLDSITRQLPQPL-DVVLQGELYLRLQAHVQAEAGS 196 Query: 196 INARAKVAGLM-MRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAV 254 N R VAG++ +Q + S+G+FVW WP GP +RL +LA GF +Q ++ A+ Sbjct: 197 SNVRGTVAGMLARKQLGPEPGASIGLFVWDWPHGPDNQGERLTQLAAWGFPDSQRFSTAI 256 Query: 255 KNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEV 314 +E R W+++ LPF TDGV++R P + W P W+ AWKY +AEV Sbjct: 257 DTPEEATHWRLHWYRSPLPFATDGVILRQDSRPPADRWQPNAPYWIAAWKYPFAQALAEV 316 Query: 315 KAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGI 374 + ++F +G++GK++ + L PV LDD+++ +V++GS+ RW+ DI PGDQ+ +SLAG I Sbjct: 317 REVRFLIGRTGKVTPLLRLKPVTLDDRRISQVSLGSLARWRALDIRPGDQVAISLAGLTI 376 Query: 375 PRIDDVVWRGAER-TKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGE 433 PR D VV R ER P P ++ +C+ ASD CQEQFI+RLVWL KQ L + G G+ Sbjct: 377 PRFDQVVHRAVERQVLPVPEAEQYGQHSCWQASDGCQEQFIARLVWLSGKQGLAMPGTGK 436 Query: 434 AGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMG 493 W+ L Q + WL L +QL + PGI++ + QL F++ R +PF +W +G Sbjct: 437 GTWKRLVQAGLVTSLTDWLTLDAQQLLSVPGISRKTATQLQRSFDIGRNRPFAQWRKGLG 496 Query: 494 IPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 +P A + +W L + WQ LPG G+ RA Q+ + + Q++++ + L + Sbjct: 497 VP---APAQVPRDENWQTLAGRSASDWQTLPGIGATRATQLANFFTHEQVQRIATLLGTR 553 Query: 554 QITGFE 559 I GF Sbjct: 554 GIDGFH 559 >UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT Length = 668 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 108/582 (18%), Positives = 221/582 (37%), Gaps = 51/582 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVM 83 S + I++L++Q+ W Y+ + V+D YD L + + D Sbjct: 1 MSKEQILLRINQLKEQLNLWSKQYYVDDNPSVDDTEYDLALKELISLENLYPEFITSDSP 60 Query: 84 MPPLNGAV-------MHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGV 128 + G V H + + + + + + ++ + K+DG+ Sbjct: 61 SQKVGGTVSEKFLKITHKTPMLSLGNVFNFDEFLEFNTQVSKVSNNLNNEYVAELKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 +++LVY +G L A +RGNG+ GED T V I ++P +S ++GEI+L + Sbjct: 121 SISLVYENGVLVSAATRGNGVIGEDVTTNVRTIKSIPLKIS-KKERVEVRGEIYLSKAEF 179 Query: 189 --------IQQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP--DGPQL-MSDRL 236 + + IN R AG + + D +L F++ + D P L + + Sbjct: 180 EKINQKRLLNNEDLFINPRNAAAGTLRQLDSKIVASRNLDAFLYYYISDDSPNLNQYESI 239 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK--EPESRHW 292 +L GF + T KN D++ +++ K +L + DG+V + S + Sbjct: 240 LKLNQLGFKTNKE-TMLCKNLDQIKAYIDKYTNLKNDLDYQIDGIVFKINDKNLQNSLGF 298 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 +W +A+K+ + ++ I VG++GKI+ A L PV L + + + Sbjct: 299 TSKIPKWAIAYKFPAEIKQTKLLDIFATVGRTGKITYNAKLEPVFLMGATISAATLNNAE 358 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA------------ERTKPTPPENRFNSL 400 + D+ + + AG IP + + + + E N + Sbjct: 359 YIKSKDLRINSIVKIKKAGDVIPEVIEAIKDETFYNLEVFQPILYCPNCHSLLEKNENEV 418 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQ 458 + + C + + L +++ + + +G+ L ++I L +Q Sbjct: 419 DQFCINSSCSMKILRSLQHFSSREAMNIVSLGDRSLEILFNLEIIQNISDIYKLEEYKDQ 478 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 + L N+++ + + +GI A + A ++ L+ + Sbjct: 479 ILAIENFGLKSYLNLIDSINMSKNNSLEKVLFGLGIRHIGSKTAKILARKYQNIDNLMKA 538 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + Q+ G A +I+W + KL + L + I Sbjct: 539 SYDELIQINSIGESLALSIIDWFKIEDNLKLINELKSFNINF 580 >UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C45C0 Length = 678 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 128/591 (21%), Positives = 229/591 (38%), Gaps = 56/591 (9%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 +P E + L++Q+ + Y+ E + D +D L L +R S Sbjct: 3 TAAPTPPAERAAELRKQLDHHNYLYYVEAAPVISDREFDTLLKELADIERANPGLVTPDS 62 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKVD 126 + V P+ G V H + D+ L + + D + K+D Sbjct: 63 PTQRVGGQPIPGFKQVTHKTPMLSIDNSYDEGDLRKFDADVRKAVGPGAAVDYVTELKID 122 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--GPLANSTLQGEIFLQ 184 GV+++L Y +G L A +RG+G G+D T + I+A+P + P A ++GE+++ Sbjct: 123 GVSMSLTYENGVLAFAATRGSGTVGDDVTHNIKTIAAIPLKLKTSNPPAIFEVRGEVYMT 182 Query: 185 REGHIQ--------QQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQL 231 R + Q NAR AG + +D + L F + D Sbjct: 183 RGELARINAEQAKGNQEPYKNARNLTAGTLKLKDPRECATRKLAFFAYGSGDIGGLAITT 242 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EP 287 + L +L GF + + R + DEV EW + EL + TDG+VV+ + Sbjct: 243 QAAMLAKLKEFGFPVNP-HERVCGSIDEVIAYCQEWEPKRKELAYDTDGIVVKVNDWAQR 301 Query: 288 ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP-VMLDDKKVQRV 346 E + +W A+K++ ++ + F +GK G+++ VA+ P V L V Sbjct: 302 ERIGYTAKVPKWAKAYKFEAEQATTKLGKVVFYLGKFGELTPVATFDPPVQLAGTTVTHA 361 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--------------RGAERTKPTP 392 ++ + E D+ GD ++V G+ IP++ DV+ + + P Sbjct: 362 SMHNASWVAERDVRIGDTVVVEKKGEIIPQVVDVIKADRTGAEQVITWPDKCPKCGGPVE 421 Query: 393 PENRFNSLTCYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 E S A+ VC Q RL K + +DG+G L T + + Sbjct: 422 KEESATSYNFICANTGVCPAQLAKRLEGFAKKTRMEIDGLGREVAVQLVDTELVKSVADL 481 Query: 452 LLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERS 508 LT QL G K+ L ++ + R + + I + A L + Sbjct: 482 YRLTKAQLLALEGFKDKKAQNLLDGIAASKGRGLARLLPGLTIYMVGEAMSDLLVEEFPD 541 Query: 509 WSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 ++ + + ++ G G RA+ V + ++ ++L + L I Sbjct: 542 IDLIIAAAPEDLARVKGFGPKRAQFVRAFFDSESGRQLIADLKQFGIKMTH 592 >UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID=C2M9J9_9PORP Length = 679 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 125/594 (21%), Positives = 227/594 (38%), Gaps = 62/594 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM 84 +P + EI +L++ I+Q + Y+ + + D YD L RL + E D Sbjct: 1 MTPNSTELEIEQLRKTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHP-EFADPTS 59 Query: 85 PPLNG---------AVMHPVAHTGVRKMVDKNALSLWMRERSDL--------WVQPKVDG 127 P L V H + + + ++ + L + K DG Sbjct: 60 PSLRVGRDRNDAFVQVAHEQPMLSLSNTYNYDEIAEICKRTDTLLATDDVPWVAEMKYDG 119 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQT---VSGPL----ANSTLQGE 180 +++L+Y +G L +A++RG+G G+D T V I +VP ++G ++GE Sbjct: 120 SSISLIYEEGVLARAVTRGDGTLGDDVTVNVRTIQSVPLRLHSIAGHPDYTRGRIEVRGE 179 Query: 181 IFLQREGH--------IQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG---- 228 + L + + + N R AG + + + + + Sbjct: 180 VLLPFKEFERLNGERTAESEAPFANPRNAAAGTLKTLNSRIVAQRRLLCICYYLYALDDE 239 Query: 229 ---PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRA 283 P +R+K L GF ++ + + +EW + +LP+ TDG+V++ Sbjct: 240 TRLPDSYYERMKLLEEMGFDTGVAPFKS-SDLSALYHYIDEWDVQRGDLPYATDGIVLKV 298 Query: 284 AKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + R W A+KYQP AE+ ++ + VG+SG ++ VA++ PV++ Sbjct: 299 DSLTQQRVLGNTAKSPRWAFAYKYQPENARAELLSVDYQVGRSGIVTPVANVEPVLISGT 358 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS 399 V+R + + + D+ D + + G+ IP+I V R E PE Sbjct: 359 VVRRATLHNEEFIKSLDLHYHDYVYIEKGGEIIPKITAVEPSLRRPEAEPVRLPERCPAC 418 Query: 400 LTC----------YFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 Y + C Q + R+ ++ ++ +G AL H E+I Sbjct: 419 GAPLQQIDGSVGYYCVNSYACPPQIMGRIEHYCTRRAADIN-VGPETIDALFDRHLIENI 477 Query: 449 FSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASD 505 LT L P + L ++ +PF R + +GI A A Sbjct: 478 DDLYKLTASDLAQLPNFKEKSINNLLASIEQSKGRPFARLLYGIGIRFVGEGTAKTLARH 537 Query: 506 ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 +S +L +T Q LP G A QV+ + + ++L + L + E Sbjct: 538 FQSIDRLAQATAYELQALPDVGPKIAEQVVYFFSLERNQQLIAELQRCGVRLEE 591 >UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DNLJ_AZOC5 Length = 739 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 121/636 (19%), Positives = 220/636 (34%), Gaps = 106/636 (16%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVM 83 S A +E + L Q+I D Y++E + D YD+L R + F + D Sbjct: 17 DLSATEASDEHAALSQEIASHDARYYQEDAPVISDADYDRLRRRYEDIEARFPALKNDDS 76 Query: 84 MPPLNG--------AVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPK 124 + G V+H V ++ + ++ +PK Sbjct: 77 LSRKVGAAPSAKFAKVVHQVPMLSLQNAFSDEEVEEFVARVRRFLNLAESAELAFTAEPK 136 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL--QGEIF 182 +DG++ +L Y G L +A +RG+G +GED T V I+ +P ++G + +GE++ Sbjct: 137 IDGLSCSLRYEGGVLVRAATRGDGTQGEDVTANVRTIAEIPHRLTGAGVPDIIDIRGEVY 196 Query: 183 LQREGHI-----QQQMG---GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGP---- 229 + + + Q++ G N R AG + + D T L F +AW Sbjct: 197 MGKADFLALNARQEEAGKPVFANPRNAAAGSLRQLDPEITRSRPLRFFAYAWGQAEPGPP 256 Query: 230 -QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAKE- 286 + + G R A +A R +A L + DGVV + Sbjct: 257 GASQHEVVDAFRRFGLPTNPLTIRVTDAAGLLAHYRKIGAERASLGYDIDGVVYKVDSLA 316 Query: 287 -PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 E ++ W +A K+ ++AI+ VG++G ++ VA L PV + V Sbjct: 317 LQERLGFVSRSPRWAIAHKFAAEQATTVIEAIEIQVGRTGALTPVAKLTPVTVGGVVVSN 376 Query: 346 VNIGSVRRWQE-----------WDIAPGDQILVSLAGQGIPRIDDVVWRGAER------- 387 + + + DI GD ++V AG IP++ VV Sbjct: 377 ATLHNEDYIRAIGGNGEEIREGIDIRVGDTVVVQRAGDVIPQVVSVVLDKRPAGATAYQF 436 Query: 388 ------------TKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG 435 + P + +++ +C Q + RL ++ ++G+GE Sbjct: 437 PHHCPVCNSQAVREVDPKTGKQDAVRRCTGGLICPAQAVERLRHFVSRNAFDIEGLGEKQ 496 Query: 436 WRALHQTHRFEHIFSWLLL------TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWV 489 A ++ L + +L+N G ++ + L+ R R++ Sbjct: 497 AHAFYEWKLIAEPADIFRLQARNEQSLSKLENREGWGRTSAQNLFAAIEARRTIALDRFI 556 Query: 490 MAMGIPLTR---AALNASDERSWSQLLFSTE----------------------------- 517 A+GI A A S L + Sbjct: 557 FALGIRHVGETNAKRLARHYGSVEALRDAAIGAEMPTEMEEASEETPPTRRRKPQGNEVW 616 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 Q + G G+ A V+E+ +++ L + Sbjct: 617 QEMTDIDGIGAVVAEAVVEFFREPHNRQVVEELLKE 652 >UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVM Length = 808 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 112/595 (18%), Positives = 194/595 (32%), Gaps = 70/595 (11%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMMPPLNGAVM- 92 L+ Q+ Y+ +E+ D YD L L + + S D + V+ Sbjct: 38 EALRDQLNYHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVGDTVVA 97 Query: 93 ------HPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYRDGK 138 H + + +++ W PK+DG+A+ ++Y +G Sbjct: 98 ALETQAHTLRMYSLDNAFSAEEWDGFIQRMLRAEPDAPTAFWCDPKMDGLALEVIYENGV 157 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSG---PLANSTLQGEIFLQREGHIQQQMG- 194 A++RG+G KGE T + + +P + G A ++GE+ + R Sbjct: 158 FTTALTRGDGEKGEIVTTAMRTVRNLPLRLHGEGPHPARLEVRGEVVITRAEFDALNAAR 217 Query: 195 -------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----------------GPQ 230 N R AG + + D S T L + GP+ Sbjct: 218 RGAGEKLFANPRNAAAGSVRQLDASVTAGRPLRFLAYGVGQVVWPAETSDGAASAAQGPE 277 Query: 231 ----LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA 284 + LA GF R + +V + ++ELPF DGVV + Sbjct: 278 ARWATHGQVMAALADYGFGTPPDARR-CETPAQVMAYYEDLGRRRSELPFDIDGVVAKLD 336 Query: 285 KEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 + W +A K+ ++ I VG++G ++ VA LAPV + Sbjct: 337 DLSAQAALGYTARAPRWAIALKFPAHQATTRLEHIAIQVGRTGVLTPVAELAPVAVGGVT 396 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC 402 V R + + + D+ GD ++V AG IP + + + E C Sbjct: 397 VSRATLHNEDEIRAKDLRVGDMVVVQRAGDVIPEVVRPLVDQRPASGLPEFEFPAECPVC 456 Query: 403 Y-------------FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + + C ++ +K L + G+G L + Sbjct: 457 HTPVRREPGEAAWRCVNVGCPAVVRQSIIHFVSKAGLDIQGVGRRWVELLVDRGKVTSPA 516 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARK-QPFTRWVMAMGIPLTR---AALNASD 505 L + L + + F+ AR R + A+GI A A+ Sbjct: 517 DLFGLDKQTLLAFERMGPKLAENFIAAFDTARTGATLNRLICALGIRHVGEQTARTLAAH 576 Query: 506 ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 L + + QQLP G A + + N + L L + P Sbjct: 577 FADLDALGAAQAETLQQLPDIGPEVAASIRAFFANEGNRALLERLRGVGLWPVRP 631 >UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacteraceae RepID=D2QGP9_9SPHI Length = 696 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 123/607 (20%), Positives = 231/607 (38%), Gaps = 82/607 (13%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN-- 88 +E+I L ++ Q++ Y++ SEV+D +D+L A LT + + E R P Sbjct: 4 EEQIIDLTNRLNQYNFQYYQNSISEVDDFTFDKLLADLTALENQYP-EFRQPDSPTARVG 62 Query: 89 -------GAVMHPVAHTGVRKMVDKNALSLWMRERS--------DLWVQPKVDGVAVTLV 133 V H + + L + + + + K DGVA++L Sbjct: 63 GTISKEFKTVYHRFPMLSLGNTYSEEDLIEFDKRVQKGLNGQTYEYICELKFDGVALSLT 122 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV-----------------SGPLANST 176 Y +G L + +RG+G++G+D T + I VP + + A Sbjct: 123 YENGVLVQGATRGDGVRGDDITNNIRTIRTVPLRIGAGHKATHTQPESAPAVAALPALFE 182 Query: 177 LQGEIFLQREGHIQQQMGG--------INARAKVAGLMMRQDDSDTL-NSLGVFVWAW-- 225 ++GE FL + N R +G +QD L +++++ Sbjct: 183 VRGEGFLPLAEFDRINKEREDIGEPLLANPRNAASGTFKQQDSGAVAKRRLDCYLYSFLS 242 Query: 226 -PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVR 282 D Q + L + GF ++ T+ R + EV NEW + +LP TDG+V++ Sbjct: 243 DTDIFQTHEESLVAMNAWGFNVSPTW-RKCTDIQEVMAYINEWETKRFDLPLGTDGIVIK 301 Query: 283 AAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 + + R + W +A+KY+ +A E+ IQ+ VG++G ++ VA L PV+L Sbjct: 302 VNRYDQQRDLGYTAKSPRWAIAFKYKAMAASTELNGIQYQVGRTGAVTPVALLTPVLLAG 361 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKP-----TPPE 394 V+R ++ + + + D + V G+ IP+I V + R ++++P T P Sbjct: 362 TIVKRASLHNANEIERLGVMMHDTVFVEKGGEIIPKITGVDLNRRTDKSQPIVYPTTCPA 421 Query: 395 N------RFNSLTCYFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEH 447 + Y ++ C Q +R ++ + ++ +GE L + Sbjct: 422 CGTALVRKEGEAHFYCPNEQGCPPQRQARFEHFIQRRAMNIESLGEGKIELLIDRGLVQT 481 Query: 448 IFSWLLLTPEQLQNTPG--------------IAKSKSAQLWHQFNLARKQPFTRWVMAMG 493 L L + + ++ QPF + +G Sbjct: 482 PADLYDLKATDLLGIEKVFLVEETGKKRVVSFREKTVENILTAIERSKSQPFANVLFGLG 541 Query: 494 IPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWL 550 I A S ++ +T++ +P TG A V+ W + ++ L Sbjct: 542 IRYVGNTTAEKLVDYFGSMDAIMNATQEQLLAVPDTGPRIAESVVAWFGDTANQEFVERL 601 Query: 551 AAQQITG 557 A + Sbjct: 602 RAAGLQF 608 >UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ1_OPITP Length = 675 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 124/596 (20%), Positives = 224/596 (37%), Gaps = 61/596 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 +P AQ I+ L+ Q+ + D+ Y + + ++ D YD L L + + + S Sbjct: 1 MTPVEAQSRIAELRAQVARHDELYHRRAQPQIGDFEYDALKRELAELEAAWPQFARGASP 60 Query: 79 PRDVMMPPLNGAV--MHPVAHTGVRKMVDKNALSLW--------MRERSDLWVQPKVDGV 128 V G H + + L + R+ ++PK+DG+ Sbjct: 61 TEQVGDDRTEGFQVYRHRERMMSLDNTYSETELREFHDRLVRELERDGLKFVIEPKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIFL 183 AV++ Y GKL +A++RGNG++G+D T I ++P+ + A ++GE+FL Sbjct: 121 AVSITYEKGKLVRAVTRGNGIEGDDITTNALTIKSLPRELKRADGVPLPAVIEIRGEVFL 180 Query: 184 QREGHI----QQQMGG----INARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG------ 228 E + Q++ G N R AG + + D + L V ++ Sbjct: 181 TTEEFLRINRQREEAGEPLYANPRNLAAGTIKQLDPREVAQRKLEVVLYGRGYVEPASAL 240 Query: 229 PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKE 286 P+ + + G + + ADE+ E + + TDG VV+ Sbjct: 241 PETQAQFHGWVKAWGLPTVERF-WTATGADEIWAAVQELDALRDTFAYATDGAVVKLDAV 299 Query: 287 PESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 P R W +A+K+ P +++AI VG++G ++ VA L PV L V Sbjct: 300 PLQRRAGSTSKSPRWAMAYKFAPDRAETQLRAITVQVGRTGVLTPVAELDPVQLAGTTVS 359 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV--VWRGAERTKPTPPENRFNS--- 399 R + + DI GD + V AG+ IP + V R E PE Sbjct: 360 RATLHNRDEIARKDIRVGDFVYVEKAGEIIPAVIGVNPARRAPECVPYVFPEKCPECGTA 419 Query: 400 -------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 + + C Q R+ +K + ++G+GEA L + + Sbjct: 420 VVQLEGEVAVRCPNFSCPVQVRRRVQHFASKACVDIEGMGEAMVDVLVEKGWVHSVPDIY 479 Query: 453 LLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSW 509 L E L + + +L +++ R++ +GIP AA A Sbjct: 480 QLKRENLLTLGKSVEKSTDKLLEAIEASKRAELWRFIHGLGIPHAGAAAAKDLARTFGGL 539 Query: 510 SQLLFSTEQFWQQ-----LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 +L + + + + + G G A ++ + + + + L + P Sbjct: 540 ERLASARYEDFIREKASVIGGIGETMALAILAYFAEPRNRAVVDELVRVGVQPVVP 595 >UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNLJ_RHOPB Length = 795 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 127/608 (20%), Positives = 228/608 (37%), Gaps = 96/608 (15%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 S A+A+ E+ RL +I++ ++ Y+++ ++ D YD L R+ + F S Sbjct: 14 TLSKAKAKVELKRLSLEIERHNNAYYQDDAPKISDAEYDALRHRVEAIEAKFPELVSSDS 73 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDL-----------WVQPK 124 + V P G V H V + + ++ ++ +PK Sbjct: 74 PTQKVGAAPARGFAKVQHAVPMLSLGNAFSDDEVAEFLTRVRRFLKLDAEQIPAIVAEPK 133 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--GPLANSTLQGEIF 182 +DG++++L Y GKL +A +RG+G GED T V I +P ++ P A L+GE++ Sbjct: 134 IDGLSLSLRYEHGKLVRAATRGDGFTGEDVTANVRTIKDIPHALAVAEPPAACELRGEVY 193 Query: 183 LQREGHI----QQQMGG----INARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ--- 230 + + + +Q+ G N R AG + ++D + T L F +AW + Sbjct: 194 MLKSDFLALNQRQETAGEPPFANPRNSAAGSLRQKDVAITASRPLKFFAYAWGEFSDLPE 253 Query: 231 -LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKE- 286 L L AGFT+ T K+ D+ + +A LP+ DGVV + + Sbjct: 254 ATQYGMLGWLKRAGFTVNPLIT-LCKSVDDALAFYRKIGEERATLPYDIDGVVYKVDRLD 312 Query: 287 -PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 E + W +A K+ + I+ VG++G ++ VA LAPV + VQ Sbjct: 313 WQERLGFAGRAPRWAIAHKFAAEQATTILNGIEIQVGRTGALTPVARLAPVTVGGVVVQN 372 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA-------ERTKPTPP----- 393 + + + DI GD ++V AG IP+I VV E K P Sbjct: 373 ATLHNEDYIKSLDIHIGDTVVVQRAGDVIPQIVSVVRDKRPEDAEPYEFPKFCPACGSHA 432 Query: 394 ---ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 E+ ++ +C Q I RL ++ + G GE L++ + Sbjct: 433 VRDEDEGEAVRRCTGGLICPAQAIERLRHFVSRGAFDIAGFGETYVELLYEEGLVRNPAD 492 Query: 451 WLLL--TPEQLQNT-------------PGIAKSK-------------SAQLWHQFNLARK 482 L ++L+ K + L + R Sbjct: 493 IFALHSKVDELKAALFRKRESLATQREEKTGKKRKSSLSEEKRQYTDVENLLAAIDARRT 552 Query: 483 QPFTRWVMAMGIPLTRAALNASDERSWSQLL-------FSTEQ-------FWQQLPGTGS 528 F R++ +GI + + R ++ + + + + G Sbjct: 553 VAFNRFIFGLGIRHVGEVTSKALVRHFADVKAFLDGVDAAALARPGPAWLDLKNVRYIGE 612 Query: 529 GRARQVIE 536 +++E Sbjct: 613 ITLERLLE 620 >UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJM8_FIBSS Length = 715 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 113/586 (19%), Positives = 234/586 (39%), Gaps = 62/586 (10%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDVMM 84 + L++Q+++ Y+K+G S + D +D + + + GS + V Sbjct: 9 RTRYFELKKQLEEASRLYYKDGVSPMSDQDFDFGLKEMEALEAKYPELRGKGSLTQKVGS 68 Query: 85 PPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSD-------------LWVQPKVDGVA 129 N V H V + + + + +++ + + K+DGV+ Sbjct: 69 DLTNDFAKVAHAVPMLSIANVYSEEEMREFVKAAEEGLSSFVSRLSSKKWICERKIDGVS 128 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG----------PLANSTLQG 179 ++++Y +G+L +A +RG+G +G+D T I+ +P+ P ++G Sbjct: 129 LSVIYENGRLKQAATRGDGAQGDDVTLNALTIADIPEYFDAKKLKIDPSEIPQGTFEVRG 188 Query: 180 EIFLQREGH--------IQQQMGGINARAKVAGLMMRQDDSDT-LNSLGVFVWAWPD-GP 229 E++++RE ++ + N R V+G + + ++ + F + P Sbjct: 189 EVYMEREAFERLNEQFILENKKTFQNCRNTVSGSLKLKSVAECKTRPMRFFAYHIPQSNN 248 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP 287 + + LK+L GF +T DE+ + + + LPF DG+VV+ Sbjct: 249 KTHEENLKQLKRLGFHTNDYWT--ADTVDEIMAISEKIGASRDSLPFDIDGMVVKLNDLQ 306 Query: 288 ESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + R W +A+K++ + +++F VG++G ++ VA+LAPV L V+R Sbjct: 307 QQRELGSTSKSPRWAIAYKFKAERAYTPLLSVEFQVGRTGAVTPVANLAPVRLAGTTVKR 366 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS---- 399 + + D+ GD + V G+ IP+I DV R A + PE Sbjct: 367 ATLHNFDEVARLDLHYGDTVGVEKGGEIIPKITDVKRELRPAGASPVVAPEKCPVCGEQL 426 Query: 400 ------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + + C+ Q +++ + ++ +G A +L T + + I Sbjct: 427 THIDGEVILRCENLHCKAQVQCLFEHFVSREAMNIENLGPALIASLLATGKIKRIPDLYR 486 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWS 510 LT E L++ +AK + ++ ++++ + +GI A A R+ Sbjct: 487 LTLEDLESQERMAKKSAKNVFDAIQASKQRSLENLLHGLGIRFVGRTSARNIAKHFRTLE 546 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 ++ +T + Q + G + V E+ L A + Sbjct: 547 KIRTATVEELQNVTDVGERIGKSVYEFFHTPLYTNEIDELVALGLP 592 >UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=DNLJ_PARUW Length = 665 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 112/578 (19%), Positives = 223/578 (38%), Gaps = 56/578 (9%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 Q++ +L +I + Y+ E + + D +D L +L + +R S + V Sbjct: 4 QKDYEKLCHEIWHHNKLYYIEHQPIISDEEFDALLKKLEEIERSHPEWITEFSPSQRVNE 63 Query: 85 PPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGVAVTLVY 134 +G V H + K + +++ + + V+ K+DG+A+T +Y Sbjct: 64 SLTSGFKTVAHRTPMLSLANTYSKEEIEDFIKRLQKLVGKRQVEFSVELKMDGIAITAIY 123 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQ 192 G + I+RGNG +G+D T + +I +P +SG ++GE+F+ R+ +Q Sbjct: 124 EQGIFKRGITRGNGKRGDDITTNMRMIENLPLQLSGENLPDFLEIRGEVFMPRQVFLQLN 183 Query: 193 MGG--------INARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLKEL 239 N R AG + D L V + + + ++ Sbjct: 184 EQKLQDGEVLWANPRNAAAGSLKLLDPKMVAERRLAVVFYGLAEDSSASIKKQAEVPSFF 243 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESRHWLPG 295 + G + + +N +++ + E + LP+ DG+V++ + + Sbjct: 244 RSIGLPALEHHA-YCQNIEQIWKFAEEIRSLRTILPYDIDGIVIKLNDFKDQKRLGVTGK 302 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A+K+ + I +G++G ++ VA L P+ L + R ++ + Q Sbjct: 303 SPRWAIAYKFAAEQAKTRIIDITVQIGRTGVLTPVAELEPIFLSGSTIARASLYNQEEVQ 362 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP-ENRFNSLTC------------ 402 DI GD + + G IP++ +V ++R + P + +C Sbjct: 363 RKDIRIGDLVTIEKGGDVIPKVLNV--ELSQRPLHSQPWQMPLYCPSCGTQVINIIGEVA 420 Query: 403 -YFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 + D C EQ I +L++ KQ + + +GE L Q LT Q+ Sbjct: 421 VRCPNEDSCTEQQIRKLIYFVGKQAMDIKHMGEKIVIQLFQKGFIHLPSDIFALTEGQIS 480 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE 517 L ++ R++MA+ I A L A+ + L+ E Sbjct: 481 QLTNFKTKAIQNLMRSIEESKHVSLERFIMALEIKYIGIGTAELLAARAGTIETLMQLNE 540 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + ++ G G A+ V+E +N + ++ L + Sbjct: 541 EDLIKIEGVGGKVAQAVVEHFQNPKHRQEVYRLLELGV 578 >UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 Length = 673 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 113/583 (19%), Positives = 238/583 (40%), Gaps = 55/583 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMMPP 86 R + +I+ L+Q++ QW+ +Y+ V D VYDQ L + + + + + Sbjct: 2 DRIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQAMRELIELENAYPQFKTNNSPSVR 61 Query: 87 LNG-------AVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVAVTL 132 + G V H + D N L + ++ + V+PK+DG+++++ Sbjct: 62 VGGFVSEKFNKVKHKRPMLSLSNAFDANDLRKFDQDNQNASVDLKGYVVEPKIDGLSISI 121 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN--STLQGEIFLQREGH-- 188 +Y++ KL++AI+RG+G+ GED T + I +P + + ++GE+++ Sbjct: 122 IYKNAKLHQAITRGDGVNGEDVTSNILTIKDIPHYIDQKYKDYEIEVRGEVYMAFHDFYE 181 Query: 189 -----IQQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLKE 238 + N R AG + D+S L F++ + G + + ++ Sbjct: 182 MNDNLEESDKKFANPRNAAAGTLRSLDNSIVAERKLSAFMYYLVNAQELGIKTHYESIQF 241 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKE--PESRHWLP 294 L F ++ + V DEV + + + +L ++ DG+V++ + + Sbjct: 242 LKDNKFKVSDLIVK-VDTIDEVINQIDRYTKVRNDLSYMIDGIVIKINNLEVYDEIGYTS 300 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 +W +A+K+ +++ I VG++GKIS VA + P++LD V+ + + Sbjct: 301 KFPKWAIAYKFPANVVSSQLLEIINDVGRTGKISYVAKIKPILLDGSIVEYATLHNFDFI 360 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC------------ 402 +E DI D+I + AG IP +D V P E+ N +C Sbjct: 361 KEKDIRINDEIKIYKAGDVIPYVDGVDL-SKRLANSVPYESITNCPSCQSVLVRENDEVD 419 Query: 403 -YFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ-- 458 + C++ I ++V+ ++ + ++G+ +A + + +++ L + Sbjct: 420 QRCLNIYGCKKINIEKIVYFVSRNCMNIEGMSDAIINKFYDANLIKNVADLYYLQKHKEF 479 Query: 459 -LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLF 514 L + I + L + N ++ + + A GI A A ++ + L+ Sbjct: 480 ILASDFKIKDKSFSNLINSINNSKTRSLEFLLTAFGIRHVGPNLAKKLAKQFKTMTTLMH 539 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + + G A +I W + L + L + Sbjct: 540 ANFGELTNVDACGEKAALSLINWFNDDHNVSLVNQLQQVGVNM 582 >UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ Length = 817 Score = 535 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 124/625 (19%), Positives = 216/625 (34%), Gaps = 94/625 (15%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMM 84 S R + + L+ ++ ++ +Y+ + V D YD+L L + + D Sbjct: 13 SKDRPEARAAWLRAELNRYAHEYYVLDQPSVPDVEYDRLYRELEALETEHPELKTPDSPT 72 Query: 85 PPLNGAV-------MHPVAHTGVRKMVD-----KNALSLWMRER---------SDLWVQP 123 + GAV H + +R D A +R + + Sbjct: 73 LRVGGAVLPEFAAVRHVIPMLSIRTETDTTANGARAFDASVRRELGLDDTDPPVEYAAEL 132 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV---SGPLAN-STLQG 179 K DG+A+ L Y G L +A +RG+G GED TQ + I +P + G + + ++G Sbjct: 133 KFDGLAINLRYERGYLVQAATRGDGTTGEDVTQNIRTIRQIPLGLSPVDGHVPDVLEVRG 192 Query: 180 EIFLQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWA------ 224 E++++R+ + +N R AG + + D L F + Sbjct: 193 EVYMRRDDFEKLNARQRERGDKTFVNPRNTAAGAVRQLDPKMAAERPLSFFAYGLGEVAG 252 Query: 225 WPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVR 282 W P S L L GF ++ AV + + R + LPF DGVV + Sbjct: 253 WKGMPGTHSSMLDVLQAFGFPVSNE-RAAVAGGEGLVRFHEAIRAKRDSLPFDIDGVVYK 311 Query: 283 AAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 R + + W VA KY + V++I VG++G I+ VA L PV + Sbjct: 312 VNSLALQRELGFRSREPRWAVAHKYPAQEALTTVESIDVQVGRTGAITPVARLVPVFVGG 371 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--------------WRGAE 386 V + + + D+ GD ++V AG IP + VV + + Sbjct: 372 VTVTNATLHNEDEVRRKDVRVGDTVIVRRAGDVIPEVVSVVLDRRPLDDVPGSDLFNPQQ 431 Query: 387 RTKPTPPENRFNSLTC--------------YFASDVCQEQFISRLVWLGAKQVLGLDGIG 432 + K P E C C Q + ++++ ++G+G Sbjct: 432 QPKYPPFELPKTCPVCGSHVVREEGEAVARCSGGLFCSAQRKEAIRHFAGRRMMDIEGLG 491 Query: 433 EAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG-----------------IAKSKSAQLWH 475 E L + I LT E IA + L Sbjct: 492 ERYIDNLVELDYVHGIADLYKLTLEDFLEMKRRADERDGVTPETVSAGKIATKWAENLLE 551 Query: 476 QFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRAR 532 ++ P R++ A+GI A A S + + + LP G+ A Sbjct: 552 GIQASKTPPLARFLFALGIRHVGESTAKTLADWLGSLAMIRRAPAPLLLALPDVGATVAE 611 Query: 533 QVIEWKENAQIKKLGSWLAAQQITG 557 + ++ + ++ L + Sbjct: 612 AIADFFAEPKNQQALDALLEAGVAP 636 >UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AEV0_BURGB Length = 747 Score = 535 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 118/654 (18%), Positives = 219/654 (33%), Gaps = 119/654 (18%) Query: 18 VWAVCPAWSPA-RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 + PA PA + E + L+Q++++ + Y+ + E+ D YD+L L Q + Sbjct: 1 MARTTPADPPASQPSERAAWLRQELERANHAYYVLDQPELLDAEYDRLFRELQQIEAEHP 60 Query: 77 ------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR-------------- 114 S + V +G V+H + ++ + + Sbjct: 61 DFITPDSPTQRVGGEAADGFTPVLHDAPMLSLNNGFTDEDIAAFDKRVADALGKAVDLAG 120 Query: 115 --ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG-- 170 E + + K DG+A++L Y GK +A +RG+G GED T+ V I ++P T+ G Sbjct: 121 TAEPVEYACELKFDGLAISLRYVHGKFTQAATRGDGTTGEDVTENVRTIKSIPLTLKGKH 180 Query: 171 PLANSTLQGEIFLQREGHIQ--------QQMGGINARAKVAGLMMRQDDSDTL-NSLGVF 221 P A ++GE+ + + + +Q N R AG + + D T L F Sbjct: 181 PPALLDVRGEVLMYKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDSKVTAQRPLSFF 240 Query: 222 VWAWP--DG---PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPF 274 + DG P S L + G + + V+ A+ + + + LP+ Sbjct: 241 AYGIGVLDGAPMPDTHSGLLDWYESLGLPVNRERA-VVQGAEGLLDFFRKVGEKREALPY 299 Query: 275 VTDGVVVRAA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVAS 332 DGVV + E + ++ + +A K+ + AI+ VG++G I+ VA Sbjct: 300 DIDGVVYKVNRRDEQDRLGFVSRAPRFALAHKFPAQEARTRLVAIEVQVGRTGAITPVAR 359 Query: 333 LAPVMLDDKKVQRVNIGSVRRWQEWDI---------APGD--------------QILVS- 368 L PV + V + + + DI GD Q+ V Sbjct: 360 LEPVFVGGATVTNATLHNEDEVRRKDIRVGDTVIVRRAGDVIPEVVGRDGPHAMQVRVRF 419 Query: 369 ---------------------------------------LAGQGIPRIDDVVWRGAERTK 389 G P + + V + R Sbjct: 420 RGVRTVARRNRLRAAASSGRPMTWKPRLLKPTDRRGIRVRRGCLRPSLFEFVEQEPFRMP 479 Query: 390 PTPPEN-------RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 P ++ C Q L ++ L +DG+GE L + Sbjct: 480 TECPVCGSRIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQ 539 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL- 501 + L L A+ + L AR R++ A+GI + Sbjct: 540 NLVRTPADLFHLGFATLAALDRFAEKSAQNLLDSLEKARHTTLARFIYALGIRHVGESTA 599 Query: 502 --NASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 A + ++ ++ ++ G A + ++ + + + L + Sbjct: 600 KDLAKHFGALQPIMDASIDALLEVNDVGPVVAESLHQFFAEEHNRTVIAQLREK 653 >UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP Length = 765 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 125/650 (19%), Positives = 216/650 (33%), Gaps = 123/650 (18%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSE 78 A+ E +RL +++ Q + Y++E + D YD RL + + F GS Sbjct: 28 LDVKAAEAEHARLSEEVAQANLAYYQEDAPFISDAEYDASKRRLEEIEARFPDLAHSGSP 87 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPKV 125 V P V H + + + + +++ +PK+ Sbjct: 88 TAQVGAAPDTRFAKVPHRLPMLSLENGFSQGDVEAFVQRVRSFLNLASGAPLEVTAEPKI 147 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFL 183 DG++++L Y G+L +A +RG+G GE+ T I+ +P +SG ++GE ++ Sbjct: 148 DGLSLSLRYEGGRLVQAATRGDGAVGENVTANARTIADIPGQLSGDGYPEVLEIRGECYM 207 Query: 184 QREGHIQQQMG-----GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMS 233 E + N R AG + + D S T L F +AW + Sbjct: 208 SHEDFEKLNQSETGRVFANPRNAAAGSLRQLDPSVTAARPLRFFAYAWGEVSASFAGTQM 267 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES-- 289 + ++ + GF TR + E+ E +A L + DGVV + Sbjct: 268 EAVRRMQAFGFQTNP-LTRICASVSEMLSAWAEIEQMRATLGYDIDGVVYKVNDLAYQAR 326 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A K+ ++AI VG++G +S VA L PV + V + Sbjct: 327 LGMRSTTPRWALAHKFPAERAWTRLEAIDIQVGRTGALSPVARLHPVTVGGVVVSNATLH 386 Query: 350 SVRRWQ-----------EWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKP-----TP 392 + DI GD + V AG IP++ DV + + +P T Sbjct: 387 NEDYIAGRGADGSEIRGGKDIRIGDWVEVYRAGDVIPKVADVDLAKRPSEAEPYAFPTTC 446 Query: 393 PEN-------RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRF 445 PE +S+ +C Q + +L ++ ++G+G L + Sbjct: 447 PECGSPAIREEGDSVRRCTGGLICPAQAVEKLRHFVSRAAFDIEGLGAKLVEELFRDGWI 506 Query: 446 EHIFSWLLL-------TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR 498 L QL+N G + +A L+ R+ P R + A+GI Sbjct: 507 AEPADIFTLQDRYGPGQLTQLKNREGWGEKSAASLFQAIEKRREIPLARLLFALGIRHVG 566 Query: 499 ---AALNASDERSWSQL-------------------------------------LFSTEQ 518 A A SW L + Sbjct: 567 EVAAQDLARHYGSWEALEIALDTARPAALAHRVAEDAALAEREAARAEGRRARPSEARAA 626 Query: 519 FWQQL----------------PGTGSGRARQVIEWKENAQIKKLGSWLAA 552 Q+ G G A + + N + + L + Sbjct: 627 ALAQVDLSPEATAAWTGLIAADGIGPVLAMSLSDAFANERERAAIDRLVS 676 >UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=A6GU16_9BURK Length = 597 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 116/559 (20%), Positives = 219/559 (39%), Gaps = 62/559 (11%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 SP A + RL + +W+ Y+ EV D YD++ L Q + S Sbjct: 22 SPTVA---MRRLIDLLNRWEYAYYVLDAPEVPDSEYDKVYRSLQQIENNHPELIQNDSPT 78 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD-----------LWVQPKVD 126 + V P +G V H V + + + + + R + V PK D Sbjct: 79 QRVGGKPADGFEQVRHRVPMLSLGNAFEDSDVLAFDRRVKELADLPIDTTIAYAVDPKFD 138 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQ 184 G+A+++ Y +G ++AI+RG+G GED + V I ++P + G A+ ++GEIF+ Sbjct: 139 GLAISIHYTNGMFDQAITRGDGTVGEDVSANVKTIRSLPLKLKGSVVPAHLEIRGEIFMT 198 Query: 185 REGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQ------ 230 ++ +Q N R AG + RQ D S + + + + Sbjct: 199 KKDFLQMNQRQAELGLKVFANPRNAAAGTI-RQLDPKVAASRPLRFYCYGAALEREQLRE 257 Query: 231 --LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA-- 284 S +K LA G +++ ++ A+ + ++ LPF DGVV + Sbjct: 258 LKSQSAMMKWLAALGLPVSE-LSQTATGAEGLLSFYRSVGGRRSTLPFEIDGVVYKVDSF 316 Query: 285 KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 + ++ + VA K+ P ++ + I+ VG++G I+ VA L PV + V Sbjct: 317 DLQDQLGYVAKAPRFAVAHKFPPDEVLSRLLNIEVQVGRTGSITPVAKLEPVKVGGVVVS 376 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI-----DDVVWRGAERTKPTPPE----- 394 + ++ Q D+ GDQ+LV AG IP + + + PT Sbjct: 377 SATLHNLDEIQRKDLRVGDQVLVRRAGDVIPEVLPFPGNQRSPVSSAFVMPTHCPICNSL 436 Query: 395 ---NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 + VC+ Q ++ ++ + ++G+G L + Sbjct: 437 VRKEEGEAAFRCTGGLVCKAQLTQSIIHFAHRRAIDIEGLGSKLVEVLVDKEWVKTPADL 496 Query: 452 LLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERS 508 L + L + + L + A++ F R++ +GI A A+ ++ Sbjct: 497 FRLEFDALVQLERMGDKSARNLLDSIDKAKQTTFGRFLFGLGIRHVGEATARDLAAYFKN 556 Query: 509 WSQLLFSTEQFWQQLPGTG 527 +L+ ++E+ ++ G Sbjct: 557 VERLMNASEEELLEVTMLG 575 >UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 Length = 663 Score = 534 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 112/577 (19%), Positives = 229/577 (39%), Gaps = 50/577 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 ++ I L++ I+ +D Y+ + E+ D YD+L L + S + V Sbjct: 2 DIKKRIDELRKIIEYHNDKYYNQDDPEITDYEYDKLYVELRNLENSHPEYKIQSSPTQKV 61 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVY 134 V H + ++ + K + ++ + V+ K+DG+ V L Y Sbjct: 62 GGTVKRELRKVKHDIPVVSLQDVFSKEEVYSFVEKITSEVTYPKFVVEKKIDGLTVVLRY 121 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 +G+L +AI+RG+G GE + + + ++P+ + L ++GEI++ E I+ Sbjct: 122 YNGELKEAITRGDGSIGESVFENILQVKSIPKHIPSKLNYLEIRGEIYMTNENFIKVNEK 181 Query: 195 --------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW----PDGPQLMSDRLKELAT 241 N R AG + + D S +L +F++ + S+ L+ L+ Sbjct: 182 QEEIGGKIFKNPRNLAAGTIRQLDTSIVKDRNLDIFIFNLEISEGKKFETHSETLEWLSN 241 Query: 242 AGFTLTQTYTRAVKNADEVARVR--NEWWKAELPFVTDGVVVRAAKEPE--SRHWLPGQA 297 GF ++ + + + ADEV E + +L + DG VV+ + S Sbjct: 242 QGFDVSPNF-KICETADEVWNAILDIEESRWDLGYSIDGAVVKVDNLNDRISLGMTSKVP 300 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 +W VA+KY P + ++ I V ++G+++ +A L PV+L + + + + + Sbjct: 301 KWTVAFKYPPEQKETVIEDIIVQVSRTGRLNPLALLRPVILANTTISKATLHNQDFIDSK 360 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAE---RTKPTPPENRF---------NSLTCYFA 405 DI GD +++ AG IP I + + P + + + Sbjct: 361 DIRIGDTVIIQKAGDIIPEIIRSIPEKRPDWAKKYIIPDVCPVCNSKTIREPDGVDTRCS 420 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTP 463 + C+ Q ++ + +K + + G G+ AL + + I +L + L Sbjct: 421 NPDCEAQSFRKIGYFVSKDAMNIVGFGQNTVEALMKDGYIKKISDIYILKNYKDALIEKG 480 Query: 464 GIA-KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 I + L + L++ R + +GI A + A + +S +L + + Sbjct: 481 IIGKEKSVNNLLNAIELSKDNDIDRLITGLGIRNVGKQSAKILAGNFKSMDELAGAAYEQ 540 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 +L G ++E+ + +L L + Sbjct: 541 LIELEDFGPTTVPDILEFFNSNAYIELIKKLKEAGVN 577 >UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN Length = 727 Score = 533 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 128/592 (21%), Positives = 221/592 (37%), Gaps = 63/592 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMMP 85 PA +E + L +Q++ Y+ + DG +D+L L + + D Sbjct: 40 PAGVRERYADLVEQVRAHQFRYYVLDSPTISDGEFDELFTELQTLESDHPALRDPDSPTQ 99 Query: 86 PLNG-------AVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVAVT 131 + G AV H + D + L W+ + K+DG+A+ Sbjct: 100 VVGGTFSTDFTAVDHLERMLSLDNAFDPDELRAWVERVEREVGSSAHYLCELKIDGLAIN 159 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIFLQRE 186 L+YRDGKL +A++RG+G GED T V + VP ++G A ++GE+F + + Sbjct: 160 LLYRDGKLERALTRGDGRTGEDVTLNVRTMDDVPDQLTGTDEYPVPALVEIRGEVFFRVD 219 Query: 187 GHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMS 233 Q N R AG + ++D T L + P+ S Sbjct: 220 EFAQLNASLVEAGKPPFANPRNSAAGSLRQKDPRVTKSRPLRMICHGLGKREGFEPKQQS 279 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESR- 290 + L G ++ +T+ + DEV + W + DGVVV+ + R Sbjct: 280 ESYAALRAWGLRVSP-HTKVLSTVDEVLEHIDYWGKHRNSAEHEIDGVVVKVDEVSLQRR 338 Query: 291 -HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A+KY P + IQ AVG++G+++ A + PV + V R + Sbjct: 339 LGATSRAPRWSIAYKYPPEQATTRLLDIQVAVGRTGRVTPYAVMEPVKVAGSTVARATLH 398 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS-------- 399 + + + + GD++++ AG IP + V R + P + Sbjct: 399 NADQVRHKGVLIGDRVVIRKAGDVIPEVLGPVVDVRDGSEREFVMPTECPDCGTALAHQK 458 Query: 400 -----LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 L C S C Q RL L ++ ++ +G G AL L Sbjct: 459 EGDVDLRCPN-SHNCIGQRRERLFQLAGRKAFDIEVLGYEGVSALLSAGVVFDEGDLFDL 517 Query: 455 TPEQLQNT------PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASD 505 E L T G +L A++QP R ++A+ I A + A + Sbjct: 518 NEEALLKTTLFRTDDGSLSVNGGKLLANLESAKQQPLWRVLVALSIRHVGPIAARVLARE 577 Query: 506 ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 S ++ ++E+ G G A V EW + +++ + + Sbjct: 578 FGSLDRIQEASEEELAAGEGVGPTIATAVREWFDVDWHREIVRKWSEAGVRM 629 >UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LIGB_PHOLL Length = 580 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 216/562 (38%), Positives = 335/562 (59%), Gaps = 12/562 (2%) Query: 3 VWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYD 62 V+ + ++ + S+ CP WS + Q E + L QQ+ WD Y ++G SE++D VYD Sbjct: 12 VFSSPIVAAEIFVSNTEKNCPEWSQDKLQRETNSLMQQMAHWDQLYRQKGISEIDDEVYD 71 Query: 63 QLSARLTQWQRCFGSEPRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW 120 QL + LT WQ C P + + ++HPVAHTG+ K+ DK ++ W+ R +W Sbjct: 72 QLMSELTHWQFCLKQAPHSDFPVEVFPDNKLVHPVAHTGLSKLKDKQEINRWLHGRLPVW 131 Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGE 180 +QPK+DGVAVTLVY++GKL ISRGNG +G +WT K I +PQ + + LQGE Sbjct: 132 LQPKIDGVAVTLVYQNGKLVSLISRGNGAEGVNWTAKSRYIPDIPQNIENAPPDLVLQGE 191 Query: 181 IFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELA 240 +FL +E H QQ +G AR +VAGLMMR+D S L +G+F+W+WPDGP M +L++LA Sbjct: 192 LFLHKEEHRQQLLGSDGARNRVAGLMMRKDHSSELKQIGLFIWSWPDGPAEMESKLRKLA 251 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWL 300 GF L Y+ ++ ++V ++R +++ + F TDG+V++ EP+ W G W Sbjct: 252 DMGFPLALRYSHKIEEPEQVQKLRMHYFEQPMLFATDGIVLKQEIEPKGNQWRSGSNSWA 311 Query: 301 VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA 360 VAWK+ QV +V+ + F +G++GKISVV L V LDD+++ RVNIGSVRRW++ D+ Sbjct: 312 VAWKHPLRHQVTQVREVNFTIGRTGKISVVLGLDKVKLDDRQISRVNIGSVRRWRQLDVL 371 Query: 361 PGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENR-FNSLTCYFASDVCQEQFISRLVW 419 PGD++ ++LAG GIP++ VVWR ER PP+ + +++L+C + C++QF +RL W Sbjct: 372 PGDRVTLTLAGHGIPKLAQVVWRIKERQDIQPPDKQHYHALSCLTLTVGCEQQFNARLKW 431 Query: 420 LGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNL 479 LG + L + G+ W L + + WL L+ +Q+ PGI ++ ++ QF+ Sbjct: 432 LG--ENLQMTGVSSGSWAMLTERKLVTDLTGWLALSAQQIAALPGIGDKRAQAIYSQFSK 489 Query: 480 ARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLF--STEQFWQQLPGTGSGRARQVIEW 537 A+ QPF+ W+ +G+P + + W QL + Q QQL G +++ ++ Sbjct: 490 AKNQPFSYWMKGIGVPYMDK--LSDNVYHWQQLEQKLAAAQLKQQLT-VGQ--LKKLSDF 544 Query: 538 KENAQIKKLGSWLAAQQITGFE 559 +AQIK + L+ ITGF+ Sbjct: 545 VSDAQIKAIAEKLSVAGITGFD 566 >UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE Length = 659 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 111/574 (19%), Positives = 230/574 (40%), Gaps = 50/574 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 + +I +L IK +D Y+ + ++D YD L L Q ++ S + V Sbjct: 3 DVKLKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQRV 62 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWM-------RERSDLWVQPKVDGVAVTLV 133 + G + H + ++ ++ +++ V+PK+DGV+++L Sbjct: 63 GGEAVKGFKKLNHNSPMLSLENAFSTKEIANFIDNINFQTNSKNEFVVEPKIDGVSISLT 122 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI---- 189 Y++G L A++RG+G GED V I ++P T+ ++GEIF+ ++ + Sbjct: 123 YKNGVLVHALTRGDGSVGEDVLNNVKTIKSIPLTIPF-TKTIEIRGEIFVDKKTFLAINN 181 Query: 190 QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ----LMSDRLKELATAGF 244 Q + NAR AG + + T L + P+G + + L++L F Sbjct: 182 QLEKPFANARNLAAGTIRNLNSEITAQRKLRALFYYIPNGLEESITTQTMVLEQLKQWKF 241 Query: 245 TLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWL 300 ++ T R +N ++ + + +L F DG+V++ + W Sbjct: 242 PVSDT-IRVFQNKFQLINYLEAFDKKREQLTFNLDGLVIKLNSLLFYQQLGATSKSPRWA 300 Query: 301 VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA 360 +A+K+ P ++ A+ +G++G+++ A L V LD KV + + + DI Sbjct: 301 IAFKFSPKFVQTKLTAVLITIGRTGRVNYTAKLESVNLDGTKVTAATLHNFDYIKTKDIR 360 Query: 361 PGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-------------YFASD 407 D +++ AG+ IP++ V + E ++ +C Y ++ Sbjct: 361 INDTVVIYKAGEIIPKVLKVNLEKRKNDTIIIQEQKY-CPSCNSKLVKIVDEVDQYCTNE 419 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTP-G 464 C+E+ I + + +K + ++G+ L++ + I L Q+ Sbjct: 420 TCKERNIQLINYFVSKTAMDINGLNINTITKLYEHNLVRSIVDLYDLKDKKNQVLKLDLK 479 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 I +L ++++ R + +GI A A+ ++ L ++ + Sbjct: 480 IGDKLFNKLVDNIENSKQKGMARLLTGLGIKHVGNVLAKNLANHFKNIKALQHASLENLI 539 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 L G A + W + +L L +Q+ Sbjct: 540 SLNDVGITVAESLYNWFHDPNHLQLIEQLELRQV 573 >UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 RepID=DNLJ_ACICJ Length = 682 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 108/580 (18%), Positives = 207/580 (35%), Gaps = 55/580 (9%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG---SEPRDVM 83 PA + ++ L +++ D Y+++ ++D YD L + + V Sbjct: 11 PADPKARLAELVERLAAADAAYYRDDAPIMDDAAYDALRREAESLRAAHPDLAAALDQVG 70 Query: 84 MPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDL----------WVQPKVDGVAVT 131 P G V H + + + + + +PK+DG++++ Sbjct: 71 AAPSGAFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVAEPKIDGLSIS 130 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN-STLQGEIFLQREGHIQ 190 L Y + + + +RG+G +GED T+ + + +P T+ + ++GE+++ + I Sbjct: 131 LTYENRRFVRGATRGDGTEGEDVTENLRTLRELPATLPDDAPDFIEIRGEVYMTKTDFIT 190 Query: 191 QQMG----GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGP----QLMSDRLKELAT 241 G N R AG + + D + T L +F +A + D L L Sbjct: 191 LNQGQARQFANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQAVGETHWDYLAILRR 250 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKE--PESRHWLPGQAEW 299 GF + R + E + +A L + DGVV + E + W Sbjct: 251 WGFPVNPLAERVSEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQERLGFAGRAPRW 310 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 VAWK+ + + I VG++G ++ A L PV + V + + D+ Sbjct: 311 AVAWKFPAERALTTLLGIDIQVGRTGALTPRARLDPVNVGGVLVSHATLHNEDEIARKDV 370 Query: 360 APGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENR-----------FNSLTCYFAS 406 GD + + AG IP+I + R A+ P++ + Sbjct: 371 RIGDTVELQRAGDVIPQILRALPERRPADSVPFVFPDHCPVCGALAIRPAGEVVRRCTGG 430 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTPG 464 C Q + RL+ ++ ++G+GE + H E L + G Sbjct: 431 LSCPAQVVERLIHFCSRLAFDIEGMGEKTVQEFHGLGWLESPADIFTLRDREAAIAALEG 490 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ--- 518 + + +L + R+ R++ A+GI A L A S++ E+ Sbjct: 491 WGEVSARKLIAAIDARRRISLARFIYALGIRRIGEQNAKLLARHYSSYAVWRRQMEEAGV 550 Query: 519 -------FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLA 551 + G G A ++ + + L L Sbjct: 551 IGSDARLELGSISGIGPSIAEELAGFFAEPHNRDLLDRLV 590 >UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=DNLJ_AYWBP Length = 671 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 117/576 (20%), Positives = 226/576 (39%), Gaps = 51/576 (8%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN- 88 +++I L +Q+ + + Y+ ++ D YD L L + + + + P L Sbjct: 7 IKQKIKSLVKQLNKANYQYYNLSDPDLSDQQYDALIKELINLENHYP-QFKLPYSPTLKI 65 Query: 89 --------GAVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVY 134 + H + + + L + L + K+DGVA++L Y Sbjct: 66 GGFVEKKFSTIKHKTPMMSLANVFNIEELKAFYDRIVKKIPTFSLLTELKIDGVAISLKY 125 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 + G L +A++RGNG+ GED T+ I +P ++ L + ++GEI+L + Sbjct: 126 QKGILVRALTRGNGIWGEDVTKNAQTIKTIPLRLNEDL-DLEVRGEIYLSHPDFEKLNAQ 184 Query: 195 --------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD---GPQLMSDRLKELATA 242 N R +G + + + + L +FV+ D + L L Sbjct: 185 RKQENKPLFSNPRNAASGTLRQLNSAVVAKRNLSIFVYGIADPYLTKPTQKETLVFLTAL 244 Query: 243 GFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPE--SRHWLPGQAE 298 GF + V N + + V ++ K +L + TDG+V++ + Sbjct: 245 GFATNPHHY-FVSNFENLLSVIEKYKSIKEQLTYDTDGIVIKINELVFHSLIGATAKAPR 303 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W A+K+ + + ++ I F VG++G I+ V + PVM+D V +V + + + D Sbjct: 304 WATAYKFATITSQSIIQNIIFQVGRTGVITPVCEIMPVMVDGSLVSKVFLHNYDYICKKD 363 Query: 359 IAPGDQILVSLAGQGIPRIDDVVW-RGAERTKPTPPENRFNSLTC-----------YFAS 406 I D ++V AG IP I +V+ + + KPT + S + + Sbjct: 364 IRIKDHVIVHKAGSVIPEILEVIKSKRTDLQKPTLMIEKCPSCKTILEKQPGGIDYFCLN 423 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ--LQNTPG 464 C+EQ I +L+ +K + ++ +GE + LL Q LQ G Sbjct: 424 PNCREQKIQKLIHFVSKNAMDINVLGEQTIITFFDKNLITKPSDLYLLKNHQHILQEISG 483 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFSTEQFWQ 521 K + ++++ F + A+GI + A ++ L ST Sbjct: 484 FGAKKITNILDAIEASKQKGFEDVLFALGIKHIGKKVSQVLAKYFQTIENLQQSTSDTIT 543 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 Q+ G A+ + ++ N+ + + L ++ Sbjct: 544 QIREIGIKIAQSIQQYFSNSCNLEEVTKLKKLGVSF 579 >UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF Length = 699 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 127/613 (20%), Positives = 223/613 (36%), Gaps = 80/613 (13%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDV 82 A+ + L+ +I D Y+ + + D YD+L L + + D Sbjct: 4 DADRDSAETRAAELRARILDADHAYYVLDRPVLADAEYDRLVRELAEIEAAHPELATSDS 63 Query: 83 MMPPLNGA-------VMHPVAHTGVRKMVDKNALSLWMRE-----------RSDLWVQPK 124 ++GA V+H + + L + + +PK Sbjct: 64 PTQRVSGAPSERFERVVHREPMLSLGNIQSDGELDEFDARVHRLLGLAGDVQVGYVAEPK 123 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLI------SAVPQTVSGPLAN-STL 177 +DG+AV LVY G+L + +RG+G+ GED T + + VP+ ++G + + Sbjct: 124 LDGLAVELVYEGGRLVQGSTRGDGVNGEDVTANLRTVGRTRANRGVPERLAGEVPPRVEV 183 Query: 178 QGEIFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTLNS-LGVFVW----- 223 +GE+ L +E N R AG + + D T L + Sbjct: 184 RGEVLLFKEHFEAMNRQILRAGDEPFANPRNAAAGSLRQLDWRVTARRPLSFIAYEALVP 243 Query: 224 --------AWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELP 273 A P + +++L+ LA GF R + V R+ + LP Sbjct: 244 GAEPGGARAGPWAWRTHAEKLEALARWGFETNAENER-CEGIAAVKAYRDRMAERRFALP 302 Query: 274 FVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVA 331 + TDGVVV+ R W VA+KY P + ++ I +VG++G ++ V Sbjct: 303 YDTDGVVVKVDDLDWRRRLGAASKFPRWAVAFKYPPQEEATRIRRIWASVGRTGILTPVV 362 Query: 332 SLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERT 388 PV L V R + + + D+ GD ILV AG+ IP + + G ER Sbjct: 363 DFEPVRLSGAMVSRATLHNEDEMRRKDVLEGDWILVRRAGEVIPEVVMPLKERRTGEERP 422 Query: 389 KPTPPEN--------RFNSLTCY-FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRAL 439 P E R Y C Q + RL ++ + +DG+G+ L Sbjct: 423 FAFPAECPICGAKVVREEGEKVYRCTGAACPAQLVGRLTHFAQRRAMDIDGLGDKLALGL 482 Query: 440 HQTHRFEHIFSWLLLTP---EQLQNTPGIAK---------SKSAQLWHQFNLARKQPFTR 487 + + + ++L + P + + + ++ R Sbjct: 483 VERGLVKDFADLYAVPFPAWQELFSRPRKEERDAKAELPQKSAQNMVDALERSKATTLRR 542 Query: 488 WVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIK 544 + A+GIP AA A ++ + ++E + G AR++ W E Q + Sbjct: 543 LLFALGIPQVGEATAATLARHFGELARFMDASEDALLAVRDVGPETAREIRAWTEEPQNR 602 Query: 545 KLGSWLAAQQITG 557 ++ L A + Sbjct: 603 RVVERLLAAGVRP 615 >UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DNLJ_MYCPE Length = 701 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 105/599 (17%), Positives = 230/599 (38%), Gaps = 70/599 (11%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMM 84 + I L++ + Q++ +Y+ V D YD L Q + + + + Sbjct: 18 NNKEILNRIQNLRKNLNQYNYEYYGLENPSVSDYEYDMCLKELIQLETQYPEFDSPNSPS 77 Query: 85 PPLNG-------AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGVA 129 + G V H + + D+ L + + V+PK+DG++ Sbjct: 78 KKVGGYISEKFNKVKHEIPMMSLSNAFDEEDLLKFDNDIKKAIGSSDFSYVVEPKIDGLS 137 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 +++ Y+DG L +A++RG+G GED TQ + I ++P + + ++GE+FL ++ Sbjct: 138 ISVKYKDGNLIQAVTRGDGEIGEDVTQNIKTIKSLPLNIEYD-KDLEIRGEVFLTKKDFE 196 Query: 190 QQQ------MGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQL----MSDRLKE 238 + NAR +G + D + T L + P +L D L Sbjct: 197 KINSDPNLTKKFANARNAASGSLRNLDSNITAKRNLSALFYYVPKATELKIAKQYDVLSW 256 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP--ESRHWLP 294 L +++ N V +E + + + DG+V++ E + Sbjct: 257 LDKQLIPISREIRH-CNNIQGVIERISELTDTRDQFKYDIDGIVIKVNDFNHYEEIGYTS 315 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 +W +A+K+ V + ++ +I VG++G+I+ +A+L ++L+ +V++ + + Sbjct: 316 KFPKWAIAYKFPAVVKQTKLNSIDVTVGRTGRINYIANLDEILLEGSQVKKATLHNYDYI 375 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC------------ 402 ++ +I D + + AG+ IP+I + + ++ PE N +C Sbjct: 376 KDHEIMLNDIVEIYKAGEIIPKIIRSIKEKRDGSQVVFPE-PTNCPSCDSKLVKKEQEVD 434 Query: 403 -YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQL 459 Y ++ C E+ I ++ + ++ + ++G+ + L + L E L Sbjct: 435 LYCLNENCVEKQIQQIEYFSSRDAMNIEGLSISIISQLFRNKIINDAIDLYELAHKKEIL 494 Query: 460 QNTPG------------------IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR--- 498 T + ++ +++ +GI Sbjct: 495 IATKQKFYRKNDDGTKTEFERSLFKDKSFTNIIEAIEKSKSNSMEKFLTGLGIKYVGLRA 554 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 A + +S +L +T + +Q+P TG + ++ W + + + L I Sbjct: 555 AKALSKRFKSIEELAMATREEIEQVPDTGEKMSESLVNWFSDPKNQDLLWRAKKVGINF 613 >UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=DNLJ_ERYLH Length = 736 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 117/640 (18%), Positives = 220/640 (34%), Gaps = 112/640 (17%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM 84 S A A E+ RL +QI + D Y E E+ D YD L R + + F R+ Sbjct: 8 LSEAEAANELMRLARQIAKHDRLYHAEDAPEITDQEYDALVRRNAELEAAFPHLVREDSP 67 Query: 85 PPLNG---------AVMHPVAHTGVRKMVDKNALSLWM-----------RERSDLWVQPK 124 G V H V + ++ ++ E + K Sbjct: 68 SRKVGHAVAASPLSKVTHEVRMMSLDNAFADEEVAEFVARVRRYLNIGEDEAIAFTAEDK 127 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--------------- 169 +DG++ +L Y +GKL +A +RG+G GED T V+ I +PQ ++ Sbjct: 128 IDGLSCSLRYENGKLVRAATRGDGQVGEDVTPNVAHIGDIPQELTPLPLAGGAGGGPLDD 187 Query: 170 -----------------GPLANSTLQGEIFLQREGHIQQQMG------------------ 194 A ++GE+++ Sbjct: 188 SGSAPTPDPSRRREGKWNGPAVFEIRGEVYMATADFHALNARLMDEARAEADEKDNAFDT 247 Query: 195 -----GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD-----GPQLMSDRLKELATAG 243 N R AG + ++D S T L + W + + ++++A G Sbjct: 248 AKVRQFANPRNAAAGSLRQKDASVTATRPLRFWAHGWGAVEGDVPGETQVEVVEQIAAWG 307 Query: 244 FTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHWLPGQAEW 299 ++ + R + +E+ +A+LP+ DGVV + + ++ W Sbjct: 308 VPVSPLFRR-CETLEEMLAHYEAIGAQRADLPYEIDGVVYKVDRLDYQQRLGFVAKAPRW 366 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +A K+ ++ I VG++GK++ V LAPV++ V V + + + + Sbjct: 367 AIARKFPAEQAETTLENIDIQVGRTGKLTPVGRLAPVLVGGVTVTNVTLHNRDEIERLGV 426 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERT----KPTPPENRFNSLT-------CYFASDV 408 PGD+++V AG IP++ + +R T PE +++ + Sbjct: 427 RPGDRVVVQRAGDVIPQVVRNLTPDEKRDSFEFPDTCPECGSEAVSEEGGVDVRCTGGLI 486 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIA 466 C Q RL ++ L +DG+GE E L +++ G Sbjct: 487 CPAQRTERLKHFVSRAALDIDGLGEKTIDQFFALGWLESPADIFRLKDRRDEILALEGWM 546 Query: 467 KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQL---------LFSTE 517 L R+ R ++ +GI A + + +L + + Sbjct: 547 DKSVDNLLASVEARREPDTARLLLGLGIRHVGAVTARDLMKYFHELPALRETAEKARAGD 606 Query: 518 QF----WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 + + G GS + ++ + + L ++ Sbjct: 607 EEAVVALTSIDGIGSAVVEALGDFFHEEHNRAVWDDLLSE 646 >UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 Length = 663 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 114/572 (19%), Positives = 213/572 (37%), Gaps = 43/572 (7%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-----EPRDV 82 A ++++ L ++ + D Y+ + + D YD L + + P Sbjct: 3 AVSRDDYIALCTELVEHDRRYYALNQPTISDYSYDMKMRELQEIEVQHPEWKVSWSPTMY 62 Query: 83 MMPPLNGA---VMHPVAHTGVRKMVDKNALSLWMRERSDLW-------VQPKVDGVAVTL 132 + +G V H + + L + L ++ K+DG+AV + Sbjct: 63 LGDRPSGQFPVVPHSSPMLSIANVYSLQELEEFFSRTEKLLGYSPGYSLELKIDGIAVAI 122 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-GPLANSTLQGEIFLQREGHI-- 189 Y +A+SRGNG+KGED T VS I ++P + + ++GE+FL E Sbjct: 123 RYEKRLFAQALSRGNGVKGEDITANVSTIRSLPMRLPQEAPEDLEVRGEVFLSYEAFEEL 182 Query: 190 ------QQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQ--LMSDRLKELA 240 Q ++ N R G + + L + V+ + + L+ + Sbjct: 183 NACQREQGKLEFANPRNAAGGTLKLLSSKEAAKRKLDLSVYGLITDQKKRSHFENLQLCS 242 Query: 241 TAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAK--EPESRHWLPGQA 297 GF + + + V R+R E +A LP DGVV++ + Sbjct: 243 QWGFFVAGMPKQCRSRQEVVERIREIEEMRAALPMAIDGVVIKVDNIAHQDRLGLTSKHY 302 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 W +A+KY P ++ I VGK+G ++ VA LAPV L +V R ++ + ++ Sbjct: 303 RWAIAYKYAPERAETILEDIVVQVGKTGILTPVAELAPVFLSGSRVSRASLYNQDEIEKK 362 Query: 358 DIAPGDQILVSLAGQGIPRIDDVV----------WRGAERTKPTPPENRFNSLTCYFASD 407 DI GD + V G+ IP+I + W+ ++ + Sbjct: 363 DIRIGDSVYVEKGGEVIPKIVGINLAKRSLESEPWKMPSLCPVCHEPVVKEKVSVRCINP 422 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK 467 +C + ++ + +K L +D +GE L + LT E L+ PG Sbjct: 423 LCSGGMLEKICFFASKSALNIDHLGEKVVTKLFEVGLISSCSDIFALTEEDLKQVPGFKD 482 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQLLFSTEQFWQQLP 524 L A+K R + A+ IP A A + +++ ++ + Sbjct: 483 RSIQNLLASIAGAKKVALDRLLTALSIPFVGSSGAIALADHFGTLDKVIEASLDELMSIE 542 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 G G A ++ + + ++ + + Sbjct: 543 GIGPKVAASIVAFFSKHENREEIRRMQELGVQ 574 >UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL Length = 664 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 108/578 (18%), Positives = 211/578 (36%), Gaps = 53/578 (9%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMMPP 86 E++ L +++ Q+ +Y+ + D YD L ++ S + V Sbjct: 6 EKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKKTEVTLPYSPTQRVGDKI 65 Query: 87 LN--GAVMHPVAHTGVRKMVDKNALSLWMRERSD-----------------LWVQPKVDG 127 L H + K + L W V K DG Sbjct: 66 LGEFSKYTHKGRLWSLDKAQNMEQLIEWHNRNLKVIEQYNSMSEDKLPELRYIVTKKFDG 125 Query: 128 VAVTLVY-RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQRE 186 + V Y +G L K+ +RG G+ GED T ++ I VP + + GE + + Sbjct: 126 LTVNCTYDENGILIKSATRGTGIIGEDITAQIKTIKTVPLKIKNSYV-IEVHGEAIMTKT 184 Query: 187 GHIQQQMGG----INARAKVAGLMMRQDDSDTLNS-LGVFVW--AWPDGPQLMS--DRLK 237 + N R AG + D +T L F + + +GP+ S + + Sbjct: 185 AFEEYNKAAQVPLKNLRNGAAGALRNLDIKETARRNLSAFFYDVGYNEGPEFKSYREMMN 244 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAK--EPESRHWL 293 + G Y + N +EV + E + EL + DG V+ E + Sbjct: 245 FIRNMGLP-QDKYIKECTNMEEVEKEIEYIESIRGELDYDIDGAVIVVDDIKTREILGYT 303 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 +W +A+K++ ++ +++ VG+SG+++ A L PV L V+R + ++ Sbjct: 304 IKFPKWAIAYKFEAKEITTKLLDVEWNVGRSGRVTPTALLEPVELGGVTVKRATLNNMDD 363 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRF---------NSLTCYF 404 + ++ G ++LV + IP I VV E ++ +R N + Y Sbjct: 364 IKRKNVKLGAKVLVRRSNDVIPEIMGVVEESLEESEEIQAPDRCPYCNSHLVQNGVHYYC 423 Query: 405 AS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 + C+ Q + +V +++ + + G E L + + I + E+L Sbjct: 424 ENTLSCKPQMVKSIVHFASREAMNIAGFSEKTAEQLFEKLDIKSIADLYKIKKEELLTLE 483 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQFW 520 KS L ++ ++ A+GIP ++ + +T + Sbjct: 484 KFKDKKSQNLIDAIQNSKNCDLASFIYALGIPNVGKKTANDLVMKFKTLESIKNTTIEQL 543 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 ++P G A+ + ++ E+ +I L + + Sbjct: 544 VEVPDVGEIVAKSIYDFFEDEKIISNIEELLNLGVKPY 581 >UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BDK0_9FIRM Length = 667 Score = 525 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 112/580 (19%), Positives = 222/580 (38%), Gaps = 55/580 (9%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAV 91 +E+ ++ ++I + D Y+ K V DG YD+L +L + Q+ P + + G + Sbjct: 5 DELKKIIERINELDYHYYTLDKPLVSDGEYDKLYNQLIKLQKNLAYVPENSPTNRVGGQI 64 Query: 92 M-------HPVAHTGVRKMVDKNALSLWMRE-----------------RSDLWVQPKVDG 127 + H K + + W+ + ++ K DG Sbjct: 65 LDKFEKHYHLTRLLSQDKAQSYDEIKEWIERCKRLKEAYESTSGERLPNLEFVMEYKFDG 124 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 + + L Y DG L A +RGNG+ GE + I ++P T+ + +QGE + Sbjct: 125 LTINLTYEDGILKTAATRGNGIVGEQVKAQAETIRSIPFTIKEK-SLLEIQGEALMPLSE 183 Query: 188 ----HIQQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGP---QLMSDRLKEL 239 + + + NAR AG + D +T L + +A P + + L L Sbjct: 184 LDRYNKENETQLKNARNAAAGAIRNLDTKETAKRHLTAYFYAVPTNSINFKNEEEMLSFL 243 Query: 240 ATAGFTLTQTYTRAVKNADEVARV--RNEWWKAELPFVTDGVVVRAAK--EPESRHWLPG 295 + Y + V + DE+ R + + L +TDGVV++ E Sbjct: 244 KEMKLNV-HPYHKKVTSLDEIINELERIKEERKTLDVLTDGVVIKINDKKTQEVLGVTEK 302 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A+K++P ++ + + VG++GK++ A L PV V R + + + Sbjct: 303 FPRWSIAFKFEPEEFTTKLLDVIWNVGRTGKVTPSAILEPVDFSGVTVSRATLNNYDDIE 362 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCY-----------F 404 + G + + + IP I VV T E + C+ Sbjct: 363 RKKVKIGSDVFIRRSNDVIPEILGVVDENQPGTIKI--EKPTHCPYCHSELIQEKVHIVC 420 Query: 405 ASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 + + C Q ++R+ ++ + ++G+ E L + + I+ LT ++L Sbjct: 421 PNSISCTPQLLARMEHYASRNAMDIEGLSEKTIGQLIEELSIKEIYDIYDLTYDELIKLE 480 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQFW 520 K+ L + ++ + ++ A+GIP A+ +S+ +L +T Sbjct: 481 RFGHKKAKNLLASIDNSKNRDLDAFIYAIGIPNVGERTARDLANKFKSFDKLRNATVDEL 540 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 ++ G ++E+ + I + L ++ I P Sbjct: 541 IEIDDIGEITGENIVEFFHDKNIVESIDILLSKGINLNNP 580 >UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZM17_PLALI Length = 707 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 127/600 (21%), Positives = 221/600 (36%), Gaps = 68/600 (11%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S +A+ + +L+Q+I++ D Y+ ++E+ D YD+L ARL + + F S Sbjct: 17 TSADQARHLLDKLRQEIRRHDRLYYVLAQNEISDLEYDRLMARLLEVEAAFPELTTADSP 76 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERS------------DLWVQPK 124 + V P+ G V H V + + D++ L + ++ S + + K Sbjct: 77 SQKVGGEPIEGFVQVAHSVPMLSIDNVYDESGLLEFGQKVSRRASEVGWKGPMEWLAEFK 136 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV------------SGPL 172 VDGVA++L+Y +GKL +A++RG+G G+D T I VP + S Sbjct: 137 VDGVALSLIYEEGKLIRAVTRGDGRVGDDVTHNAKTIKGVPLFLEDGSSKKSLFAESNIP 196 Query: 173 ANSTLQGEIFLQREGHI--------QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVW 223 ++GE ++ + + + N+R AG + D L F Sbjct: 197 RLLEVRGEAYIGNQDFAKVRAHQLERGEEPFKNSRNATAGSLKLLDPKLCAQRQLRFFAH 256 Query: 224 AWPD-------GPQLMSDRLKELATAGFTLTQ-TYTRAVKNADEVARVRNEWWKAELPFV 275 + + +D L+ G T A A + L F Sbjct: 257 SLGAIDEQEATRFKTHADYLELFYQVGLPTVPMTACHPSFEAAVAASPTMMEALSTLDFE 316 Query: 276 TDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DG+V + W+VA+K++ +V I VGK+G ++ VA L Sbjct: 317 VDGLVFKVNNLALRAELGMTSKSPRWIVAYKWERYEAATKVLNITVQVGKTGVLTPVADL 376 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE------R 387 PV + V R ++ + + + GD ++V AG+ IP I V R Sbjct: 377 EPVEIAGTTVSRSSLHNRDEIERLGLGVGDTVIVEKAGKIIPHIVRVEEHLRPTNTAPYR 436 Query: 388 TKPTPPEN------RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 T PE + + C +F L + ++Q + ++G+G L Sbjct: 437 FPETCPECSTIVEQDEGGVYIRCPNINCPARFRESLRYFASRQAMDIEGLGTKLVEQLVS 496 Query: 442 THRFEHIFSWLLL--TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR- 498 + + I L +L + + L +R+QP R + A+ I Sbjct: 497 SRLVQSISDLYRLVDKRAELLELERLGEKSVDSLLAGLEASRQQPLWRLLTALNIRHVGQ 556 Query: 499 --AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 A + A S +L T + P G A+ V + KL L + Sbjct: 557 RTAQILAERFGSMDRLSAQTIEELSATPEVGEVIAQSVHHFFHTEYGSKLIEELKNLGLN 616 >UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE Length = 647 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 115/570 (20%), Positives = 223/570 (39%), Gaps = 44/570 (7%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 ++E + W Y+ + D YD+L ++ +++R S + V Sbjct: 3 KKEYLEAVDTLNAWAKAYYTDDAPIATDEEYDELYHKVLEFERANPGDISMFSPTKRVGG 62 Query: 85 PPLNGAVM--HPVAHTGVRKMVDKNALSLWMR----ERSDLWVQPKVDGVAVTLVYRDGK 138 +G V H V + + L W++ E + +QPK DG ++ L+Y +G Sbjct: 63 EVSDGFVKARHSVRMWSMEDIFSFEELLAWLKRGDKEGLEFALQPKFDGASLNLLYENGA 122 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI-- 196 L +AI+RG+G+ GED T +I +P ++ ++GE+ + + + Sbjct: 123 LVRAITRGDGITGEDVTSNAKVIKNIPLQIAYN-GRIEIRGEVVIAKNDFDEINFARAQR 181 Query: 197 ------NARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD---GPQLMSDRLKELATAGFTL 246 N R AG + + D + T L W + + G + S + + + GF Sbjct: 182 GEPQLSNPRNAAAGSLRQLDSAVTASRRLRFKPWGYGEQNLGLETYSQMMDFIYSQGFE- 240 Query: 247 TQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVA 302 + + + + A+++ + + PF+ DG+VVR E + +++VA Sbjct: 241 REEFFKICRTAEQIEEAYKQLVAQRDSKPFMMDGLVVRVQSIAASEELGYTEKFPKFMVA 300 Query: 303 WKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPG 362 +K+ + + + + F VG+SG ++ V L PV +D V+ + + + + G Sbjct: 301 YKFPAIEKTTRLLDVAFQVGRSGVVTPVGVLEPVNIDGATVKSATLHNFDEIERLGVQKG 360 Query: 363 DQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-----------YFASDVCQE 411 D I + +G IP+I V + + ++ P E C + C+ Sbjct: 361 DFISIIRSGDVIPKITGVFKQRRDGSQ-MPIERPRECPVCGSMLLDEGVFVKCQNLECKA 419 Query: 412 QFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSA 471 + I+ L+ +K+ L +DG+GEA L + I LT + L + G K A Sbjct: 420 RVINSLIHFASKKCLNIDGLGEAIVNQLFEAGLVAKIADIYELTAQDLASLEGFKDKKIA 479 Query: 472 QLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSW-SQLLFSTEQFWQQLPGTGSGR 530 L +R ++ ++GI + + + + G G Sbjct: 480 NLLGAIEASRTPALHSFIASLGIEHIGEVAAKKIAQIYPQNWRELSFGEVAAIEGFGEAM 539 Query: 531 ARQVIEWKE-NAQIKKLGSWLAAQQITGFE 559 A E+ + N Q + Q +E Sbjct: 540 AESYAEFMQVNRQNLDEILRFVSPQAQIYE 569 >UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_ACTMD Length = 816 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 126/594 (21%), Positives = 217/594 (36%), Gaps = 63/594 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-GSEPRDVMMP 85 PA A++ L ++++ Y+ + DG +D L L + G D Sbjct: 43 PADARDRHRALAEEVRGHQFRYYVLDAPTISDGEFDALLRELQSLEDAHPGLATPDSPTQ 102 Query: 86 PLNG-------AVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVAVT 131 + G AV H + D++ L W + + KVDG+A+ Sbjct: 103 QVGGTFSTEFTAVDHLERMLSLDNAFDEDGLRAWFERVGKEVGDAARYLCELKVDGLAIN 162 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIFLQRE 186 L Y G+L +A++RG+G GED T + + VP+ ++G ++GE++ E Sbjct: 163 LRYERGRLVRALTRGDGRTGEDVTLNLRTLRDVPEVLTGTDEWPVPELVEVRGEVYFAVE 222 Query: 187 GHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGP----QLMS 233 ++ N R AG + ++D T L + + S Sbjct: 223 DFLELNAKLVEAGLPPFANPRNTAAGSLRQKDPKVTASRRLRMVCHGIGKRAGFELERQS 282 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESR- 290 D L G ++ +T V DEV W + + DG+VV+ + P R Sbjct: 283 DAYAALRAWGLPTSE-HTAVVATFDEVWARVAHWGEHRHDAAHEIDGLVVKVDEVPLQRR 341 Query: 291 -HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A+KY P + I VG++G+++ A + PV + V R + Sbjct: 342 LGSTSRAPRWAIAFKYPPEEATTTLLDIGVQVGRTGRVTPFAIMEPVKVAGSTVARATLH 401 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-----RGAERTKPTPPENRFNSL---- 400 + + + GD+I++ AG IP + V E P ++L Sbjct: 402 NASEVKRKGVLIGDRIVIRKAGDVIPEVLGPVVDVRPADAREFVMPASCPECGHALRPMK 461 Query: 401 ------TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 C A + C Q RL +L ++ L ++ +G G AL + + + L Sbjct: 462 EGDVDIRCPNA-EGCPAQLRERLAYLASRSALDVEVLGYEGAAALASSEVYGNEADLFDL 520 Query: 455 TPEQLQNTPGIAK------SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASD 505 T E L + A+L A+ QP R ++A+ I A A + Sbjct: 521 TAEDLLRVDLFRNQDGALVTNGAKLLENLEAAKSQPLWRVLVALSIRHVGPTAARALAVE 580 Query: 506 ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 +L + E G G A V EW +++ AA + + Sbjct: 581 FGGVQAILDAEEADLAAAGGVGPTIAAAVREWALTPWRQEVVRRWAAAGVRMVD 634 >UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 4222 RepID=C3IV00_BACTU Length = 656 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 98/575 (17%), Positives = 215/575 (37%), Gaps = 48/575 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 + L ++ + Y+ K D YD+L L + + S V Sbjct: 3 DLRARYLHLVGELTMLNHHYYTMDKPIASDAEYDRLYDELVKIEELHPEWTVAHSPSNRV 62 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVY 134 L+ H + + K + + ++ + + ++ K+DG+A L Y Sbjct: 63 GGEVLDKFEKKEHTMPLYSLEKSQTYDGVRKFVEDVKREFPNATFTIEQKMDGLANVLRY 122 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI----- 189 G ++ +RG G GE ++++ I ++P + +GE+F+ G Sbjct: 123 SGGSFSEGRTRGTGKIGEIVSEQIKTIRSIPLNIRF-QGVIEPRGEVFMPISGFEAYNAS 181 Query: 190 --QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVW--AWPDG--PQLMSDRLKELATA 242 + + N R AG + D L F + A+ +G + ++ + L Sbjct: 182 LPEGEAPLKNPRNGAAGALRNLDPRIAASRPLDAFWYDIAYSEGITFETQAEMMTFLQEQ 241 Query: 243 GFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE--PESRHWLPGQAE 298 GF + Y + D + E + L + DG+V++ + E + + Sbjct: 242 GFKINP-YFYVTDSIDVIIEKLEEMKEVRPTLNWDIDGMVIKVNELHIREELGYTSKFPK 300 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W +A+K++ V + + ++ + VG++GK++ +A L PV + V + + + Sbjct: 301 WAIAYKFEAVEETTTLNSVTWEVGRTGKLTPLAHLEPVDIGGTTVTKATLNNYDDILRKG 360 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS----------LTCYFASDV 408 + G ++ V + IP I +V G+E T+ PP + L C D Sbjct: 361 VKVGAEVFVRRSNDVIPEIMGIV-EGSEGTEIVPPTHCPECETVLVQDGAHLRCMNI-DS 418 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF-SWLLLTPEQLQNTPGIAK 467 C Q + + +++ + +D E L + + F L +L + Sbjct: 419 CSAQSVGKFTHFASREAMNIDSFSEKTAEQLFEAGLIRNSFVDLYRLDRNELLKLDRFGE 478 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLP 524 K+ +L ++ + ++ A+G+ + A + + ++ + ++ Sbjct: 479 RKADRLLAAIEESKSRTLEAFIYALGMRHSGKGTAERLLRYYNNIDDIANASVEDLMRIE 538 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 GS A+ + ++ N + ++ L A +T Sbjct: 539 DIGSAVAQSIFDYFHNERNLQMIEELKALGLTLTH 573 >UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR Length = 683 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 121/586 (20%), Positives = 218/586 (37%), Gaps = 63/586 (10%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE--PRD-VMM 84 + EE ++L+ QI D Y ++ K E+ D YD+L +L + + +D V Sbjct: 5 EKMIEEFTKLRDQISYHDVLYHQKSKPEIADAEYDKLKQKLVEMEGQLPGACVTQDGVGA 64 Query: 85 PPLN--GAVMHPVAHTGVRKMVDKNALSLW--------MRERSDLWVQPKVDGVAVTLVY 134 P + H + D+ + + + E +++ +PK+DG++ + VY Sbjct: 65 APDEKFSKIKHREPMLSLENAYDEQGVERFLSRIKRFLIEEEIEVFCEPKIDGLSFSAVY 124 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM- 193 DG+ KA +RG+G GED T+ V+ I P+ + ++GEI++ ++ Sbjct: 125 EDGRFVKAATRGDGFIGEDVTRNVATIKGFPRFLQDVQDRLEVRGEIYINNSDFLKLNKD 184 Query: 194 -GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ-LMSDRLKELATAGFTLTQTY 250 N R AG + + D S T L F ++ G + S+ L L + GF + + + Sbjct: 185 NEFANPRNAAAGSLKQLDVSITANRPLKYFAYSLIGGKEKSQSEVLNRLESLGFCVNE-H 243 Query: 251 TRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQ 306 N + N+ + + L + DG+V + +A+K+ Sbjct: 244 RSLTNNLSGMLEFYNKVYNCRYSLDYDIDGIVYKVNDLILQSRLGSTHKAPRSALAYKFS 303 Query: 307 PVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQIL 366 V ++ I VG++G ++ VA L PV + V R N+ + + D+ GD + Sbjct: 304 AVYAKTKLNKIFIQVGRTGVLTPVADLIPVNIGGVLVSRANLHNQDEIKRKDVREGDIVT 363 Query: 367 VSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS---------LTCYFASDVCQEQFIS 415 + AG IP+I V R A+ PE C+ Q I Sbjct: 364 IKRAGDVIPQIVRVDKGSRHADAPGFVFPEICPECGGKVQAEGAAIRCSEELTCKAQIIG 423 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE----QLQNTPGIAKSKSA 471 +L +K + G+GE + + + I L L+ P + A Sbjct: 424 KLSHFVSKGAFDIFGLGEKQIKFFYDLGLIKQIPDIFNLEERLNEFSLKEQPDWGERSIA 483 Query: 472 QLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASD-------ERSWSQLLFSTEQ--- 518 L + R R++ ++GI A L A+ S +LL + + Sbjct: 484 NLLNAIQNRRVITLDRFIFSLGIRFIGQVAAELLANYYVSYNNWYNSMIKLLSNDAEVGV 543 Query: 519 -------------FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLA 551 + G G A + + K+ L Sbjct: 544 GGVEKKIAKSFSDELVGIDGIGEKVAESLKSFFSKEHNIKMLKDLT 589 >UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG Length = 658 Score = 520 bits (1341), Expect = e-146, Method: Composition-based stats. Identities = 113/574 (19%), Positives = 222/574 (38%), Gaps = 46/574 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 ++Q+E + Y+ +S V D VYD+L L ++ S + V Sbjct: 3 KSQKEYLERIAYLNTLSHHYYNLDESIVSDAVYDELYQELKAYEEKNPNDIQANSPTQKV 62 Query: 83 MMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVY 134 N H + + + +++ L W++ + PK+DGV++ L+Y Sbjct: 63 GATATNSFNKNPHLMRMWSLDDVFNQSELQAWLQRILKTYPSASFVCSPKLDGVSLNLLY 122 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 + GKL A +RGNGL+GE T I+ +P ++ ++GE+ + +E Sbjct: 123 QHGKLVSATTRGNGLEGELVTNNAKHIANIPHFIAYD-GEIEIRGEVIISKEDFDALNKE 181 Query: 195 --------GINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMS-----DRLKELAT 241 N R +G + RQ DS+ + W G ++ + L + + Sbjct: 182 RLNANEPLFANPRNAASGSL-RQLDSEITKKRKLQFIPWGVGKHSLNFLSFKECLDFIVS 240 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEWWKAELPF--VTDGVVVRAA--KEPESRHWLPGQA 297 GF+ Q Y KN E+ + + F + DG+V+ + + Sbjct: 241 LGFSAIQ-YLNLNKNHQEIEENYHTLIREREGFFALLDGMVIVVNELNIQKELGYTQKSP 299 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 ++ A+K+ + + ++ + VG+SG I+ VA L PV + + R + + ++ Sbjct: 300 KFACAYKFPALEKHTKIVGVINQVGRSGAITPVALLEPVEIAGAMINRATLHNYSEIEKK 359 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAERTK-----PTPPENRFNSLTC-----YFASD 407 +I D+++V +G IP+I + + ++ P + L C Y + Sbjct: 360 NIMLNDKVVVIRSGDVIPKIIKPLETYRDGSQQKIMRPKVCPICSHELLCEEIFTYCQNL 419 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK 467 C + L+ +K L + G+G+ L + + L E L Sbjct: 420 NCPARLKESLIHFASKDALNIQGLGDKVIEQLFEEKLIVNALDLYALKLEDLMRLDKFKI 479 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTG 527 K+ L ++ P R + A+GI + + + +L +E + ++ G G Sbjct: 480 KKAQNLLDAIQKSKNPPLWRLINALGIEHIGKGASKTLAKYGLNVLEKSEAEFLEMEGFG 539 Query: 528 SGRARQVIEWKENAQ--IKKLGSWLAAQQITGFE 559 R ++ + + Q I+ L L + E Sbjct: 540 VEMVRSLVNFYASNQEFIRSLFELLNPKNSDMAE 573 >UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQQ1_9ACTO Length = 749 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 120/639 (18%), Positives = 218/639 (34%), Gaps = 111/639 (17%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-SEPRDVMMPPLN 88 A+E ++L +I + Y ++ ++ D YD L L + +D + Sbjct: 18 ARERHTKLAAEIDRHRQLYHRDDAPQISDAEYDALMRELLAIEEAHPVLATQDSPSQQVG 77 Query: 89 G-------AVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGVAVTLVYR 135 G +V H + L+ W+ + + K+DG+AV L Y Sbjct: 78 GDVSELFASVRHAERLYSLDNAFSPEELTAWVERVTAEVPGEAYLCELKIDGLAVNLTYE 137 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIFLQREGHIQ 190 +G L + +RG+G GED T V I+++P+ + G ++GE+F+ E + Sbjct: 138 NGVLVRGATRGDGTTGEDITPNVRTIASIPEKLKGTKKYPVPEFVEIRGEVFMSTESFEK 197 Query: 191 QQMG----------------------------GINARAKVAGLMMRQDDSDTL-NSLGVF 221 N R AG + ++D + T +L + Sbjct: 198 LNADRLAENERITAANEERKAEGKRLQKLLPLYANPRNAAAGSLRQKDPTITASRALSMT 257 Query: 222 VWAWPD----GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFV 275 V+ + P S L G + +Y + + + V + + ++ Sbjct: 258 VYGFGARRGFEPTHQSQGYAALKAWGLPTS-SYFKVLDTVEGVTEYIEHYGEHRHDIEHE 316 Query: 276 TDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DGVV++ R W +A+KY P ++ I+ +VG++G+ + A L Sbjct: 317 IDGVVIKIDDIAVQRRLGSTTRAPRWAIAYKYPPEEVTTTLRDIKVSVGRTGRATPYAVL 376 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPT 391 PV + +V+ + + + + GD++++ AG IP + V R + + Sbjct: 377 EPVRVAGSEVEFATLHNQDIVKAKGVLIGDRVIIRKAGDVIPEVLGPVEGARTGDEHEFV 436 Query: 392 PPENRFNS-------------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRA 438 P N L C A C Q RL +L + L +DG+G A Sbjct: 437 MPSNCPECGTELRQMSEGDIDLRCPNA-RSCPAQLRERLSYLTGRSCLDIDGLGYVACTA 495 Query: 439 LHQTHR-----FEHIFSWLLLTPEQLQNT---------------PGIAKSK--------- 469 L Q LT EQL P K K Sbjct: 496 LVQPLEPKQPPLADEGDLFNLTMEQLLPIKSLVLDPDSGLPKKDPKTGKDKEVTYFATQD 555 Query: 470 ------SAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFW 520 + ++ A++Q R + + I A A++ + + E+ Sbjct: 556 GAPKAGATKMLEGIEAAKQQELWRIINGLSIRHVGPVAARALATEFGDLDAIRDADEERL 615 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + G G A V +W ++ A + E Sbjct: 616 AAVDGVGPTIATAVKQWFAEDWHVEILEKWRAAGVRFVE 654 >UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=DNLJ_PELPD Length = 704 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 126/600 (21%), Positives = 220/600 (36%), Gaps = 79/600 (13%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKS--EVEDGVYDQLSARLTQWQRCFG------SEPRD 81 E I L+Q I + Y++ E+ D YD+L L + + F S + Sbjct: 14 VAERIQELRQLIAHNNRLYYENIPPRREIHDYEYDELFKELQELESRFPEFQSADSPTQI 73 Query: 82 VMMPPLNG--AVMHPVAHTGVRK------MVDKNALSLWMRERS---DLWVQPKVDGVAV 130 V G V H V + + + ++ +++ + D+ +PK+DG++ Sbjct: 74 VGGSVSEGFKKVQHSVPMLSIENKPVTKMLSEVRSIIKELKDDAISIDIVAEPKIDGLSC 133 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-GPLANSTLQGEIFLQREGHI 189 ++ Y +L +A +RG+GL+GED T V IS +P+ + ++GE+++ Sbjct: 134 SIRYEKHQLVRAATRGDGLEGEDITVNVHSISEIPKILPLDAPEVIEIRGEVYMSNSDFK 193 Query: 190 QQ--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRL 236 Q + N R AG + + D S T L F +AW + + D L Sbjct: 194 QYTAQQNKIGEKPPENPRNAAAGSLRQLDPSVTASRPLRFFAYAWGEISNSFAKSQWDAL 253 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKE--PESRHW 292 + L GF + R + ++DE+ E ++EL F DG+V + E Sbjct: 254 QTLRGWGFKVCDD-IRLLYSSDELNSYFEEMQERRSELDFTIDGIVYKLNSLSLQERVGQ 312 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W A K+ P + ++ I +VG+SG ++ VA L PV L V + + Sbjct: 313 TNRAPRWAAAQKFPPEKRETLLQNITISVGRSGALTPVAELLPVRLLGTTVSNATLHNQD 372 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA---------ERTKPTPPENRFNSLTC- 402 + D D I+V AG IP++ VV P Sbjct: 373 EVECKDFRIDDTIVVQRAGDVIPQVVSVVIEKRLSGSIPFVFPSACPVCGSKAVREPREA 432 Query: 403 ---YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--- 456 C Q + RL ++ +DG+GE + L Sbjct: 433 VWKCTGGLTCPAQSLERLKHFVSRDAFNIDGLGEKNIELFYNKGLLASPVDIFRLEEILS 492 Query: 457 ------------EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AAL 501 + LQ G + + L+ +K R++ A+GIP A + Sbjct: 493 PPLLWQQKPSEFKPLQEWDGWGELSANNLFRAIRTKQKITLYRFIYALGIPKVGEVTAKI 552 Query: 502 NASDERSWSQ----LLFSTEQF------WQQLPGTGSGRARQVIEWKENAQIKKLGSWLA 551 A + S +L + E+ + G GS A +++ + A ++ L Sbjct: 553 LADNYVSLDNWQSSMLKAAERESECYQHLISIDGIGSVVADEIVSFFAEAHNIQVLDSLK 612 >UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A405_9BACT Length = 761 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 132/657 (20%), Positives = 231/657 (35%), Gaps = 127/657 (19%) Query: 25 WSPARA--QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------ 76 +PA + I+ L+ ++ + D+ Y++ + E+ D YD+L L + Sbjct: 1 MTPAEPTPVQRIANLRAELARHDELYYRAARPEISDYDYDRLKRELANLESQHPQLDLGD 60 Query: 77 SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDK---------------------------- 106 S + + G V H A + D+ Sbjct: 61 SPTLRIGDDRVEGFTRVRHRQAMLTLDNTYDEGELREFHVRVVKALSKENPPPPPPPPPS 120 Query: 107 ---------NALSLWM---------------RERSDLWVQPKVDGVAVTLVYRDGKLNKA 142 L L+ V+PK+DGV+++L Y GKL +A Sbjct: 121 PTTTATKPTEQLDLFAPVPSPPPPPLPPATFDANIAYIVEPKIDGVSISLTYEHGKLTQA 180 Query: 143 ISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN-------STLQGEIFLQREGHI----QQ 191 I+RG+G +G+D T V I +P T+ ++GEIFL+ E QQ Sbjct: 181 ITRGDGTEGDDVTANVKTIHGLPHTLCHAPGTTTPLPALIEIRGEIFLREEEFRRINQQQ 240 Query: 192 QMGG----INARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD-----------------GP 229 + G N R AG + + D + L + ++ G Sbjct: 241 EEAGDAPYANPRNLAAGTLKQLDPTLVASRRLEIVLYGLGACEPAVPPPPPSAPTDALGF 300 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP 287 + ++L G + +V+ D V E + + TDG VV+ Sbjct: 301 DSQTTYQRQLIAWGLPTVEK-IWSVRGIDAVWTAIQELDRLRRTFAYATDGAVVKLDLFA 359 Query: 288 ESRHWLPG--------------QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 + + W A+K+ P ++AI VG++G ++ VA L Sbjct: 360 QQKILGYRGADATGRAQEARKLSPRWACAFKFPPDRAKTRLRAITIQVGRTGVLTPVAEL 419 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPT 391 PV+L V+R + + D+ D +L+ AG+ IP + +V+ R + Sbjct: 420 DPVLLAGSTVRRATLHNADEIARKDVRINDTVLIEKAGEIIPAVINVIVEKRPPDSIPYA 479 Query: 392 PPENRFNS----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 P+N + + C + R+ +K L ++G+G L Sbjct: 480 FPQNCPACNTPAVRIEGEVAWRCLNPHCPGKMRRRIAHFVSKACLDIEGLGREIVELLLD 539 Query: 442 THRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR--- 498 + + I LT EQL ++ S L + R R + +GIP Sbjct: 540 HNLIKTIPDLFRLTREQLLPLKKSGETWSGNLINAIAARRTADLWRVIHGLGIPQVGAAA 599 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 A A RS L +T ++LP G+ A+ V +W + ++L + L + Sbjct: 600 AKNLARAFRSLDALAAATLPDLERLPDFGATTAQAVRDWFADPHNQELIADLQRAGL 656 >UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=LIGB_CHRSD Length = 629 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 203/556 (36%), Positives = 302/556 (54%), Gaps = 11/556 (1%) Query: 6 AILIGILCWQSSVWAV---CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYD 62 +L+G+ WA CP +P Q + L +I +WD Y+++G+ V+DG YD Sbjct: 27 CLLVGLSTLAMPGWASAPPCPQMTPEAMQNDYQALDARIARWDRAYYRQGQRLVDDGTYD 86 Query: 63 QLSARLTQWQRCFGS-EPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--L 119 RL W CF V GA HPVA TG+ K+ D++A++ W+ + D L Sbjct: 87 SAKRRLAHWAECFPLLAKPSVNTHEPTGAKHHPVAQTGIAKLPDRDAVAGWVARQGDHPL 146 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL-Q 178 WVQPKVDGVAVTLVYR G+L AISRG+G+ G+DW K I+A+P + + Q Sbjct: 147 WVQPKVDGVAVTLVYRHGRLAAAISRGDGVSGQDWYTKALHIAAIPSHLPADAPPLVILQ 206 Query: 179 GEIFLQREGHIQQQMGGINARAKVAGLMMRQ-DDSDTLNSLGVFVWAWPDGPQLMSDRLK 237 GE++ +R H Q + G ARA++AGLM R +++G+FVWAWP+GP M +RL+ Sbjct: 207 GELYARRTAHRQSRDGTDGARARIAGLMARDTLTDREGSTIGLFVWAWPNGPDTMPERLE 266 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQA 297 LA GF T V A+++A R W++ LPF TDGVVV+ P W Sbjct: 267 TLAGWGFGDVAEMTHGVATAEDIAAWRQRWYRHALPFATDGVVVKRGDRPPGSDWQASPP 326 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 +W +AWKY +A V A++F+VG++G+I+VVA L PV+L DK+V RV++GS+ W+ Sbjct: 327 DWAMAWKYPAREALARVDALEFSVGRTGRIAVVAELEPVLLGDKRVTRVSLGSLAHWRRT 386 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE-NRFNSLTCYFASDVCQEQFISR 416 D+ PGDQ+ + LAG IP++ +VV R R + PE ++++ L+C + C++QF++R Sbjct: 387 DVRPGDQVRLRLAGLTIPQLQEVVVRTRPRPQVDAPEADQYDRLSCLRFTPACRDQFLAR 446 Query: 417 LVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQ 476 L WLG+ + L GIG A W L + + W L L+ PG+ K + Sbjct: 447 LEWLGSDEGLDFPGIGPATWNQLVDAGLVKGLLDWRTLDTAALEALPGVGKKTARAWQRH 506 Query: 477 FNLARKQPFTRWVMAMGIPLTRAALN--ASDERSWSQLLFSTEQFWQQLPGTGSGRARQV 534 F LA + RW+ A+G+P A + + L W+ G G RA Q+ Sbjct: 507 FALADTRSAVRWLRALGVPAVPRQALTDALERYGMAGLGTLAPPDWRDYSGIGETRAMQL 566 Query: 535 IEWKENAQIKKLGSWL 550 + + I+ + L Sbjct: 567 TRFFRDTDIRHWLASL 582 >UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=DNLJ_RHOBA Length = 706 Score = 513 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 127/611 (20%), Positives = 227/611 (37%), Gaps = 80/611 (13%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 + + +L +I + + Y+ + E+ D YDQL A LTQ + S Sbjct: 8 ASDSIASRVQQLVDEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENDHPDLRRPDSPT 67 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR--------ERSDLWVQPKVDGVA 129 + V ++ V H V + + L+ M E ++ K+DGVA Sbjct: 68 QLVGGDVVDQLVQVPHRVPMLSIDNTYSREELAAAMERIEKSLEGESVAWTMEYKIDGVA 127 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP------------LANSTL 177 ++ Y +G+L A++RGNG G+D T V I +P++++ + Sbjct: 128 GSIRYENGELTLALTRGNGQVGDDITHNVRTIRELPRSIADAALAHPEVAGGNVPEVLEV 187 Query: 178 QGEIFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG- 228 +GE+++ N R AG + R D S + + G Sbjct: 188 RGELYMTDADLADLNVRQTDAGHEPFKNTRNVTAGTI-RLLDPKIAASRNIRFFCHGSGE 246 Query: 229 -----PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVR 282 L+ + G + R D + + E +LPF DG+V + Sbjct: 247 LVGVRASDHMTFLQHVQALGIPIAPDVVRFENKEDALQAIAKLELEMPDLPFEIDGIVFK 306 Query: 283 AA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 ++ E W++A+K++ + ++AI VGK+G I+ VA L PV + D Sbjct: 307 VDSFEQREKLGVRSKSPRWVIAYKFERYEAITTLEAIDVQVGKTGTITPVAYLTPVDIAD 366 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPP-ENRFNS 399 V R ++ + + D+ GD ++V AG+ IP++ V RTKP P E + Sbjct: 367 TTVSRASLHNADEIERLDVRVGDTVVVEKAGKIIPKVVRV--EKHARTKPLPKFEFPTHC 424 Query: 400 LTC-------------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 C + C Q RLV+ G++ + +DG+GE L Q E Sbjct: 425 PQCDEVLTRDEGGVYIRCTNPACPAQLRQRLVYFGSRTGMDIDGLGEEVVDLLLQKELVE 484 Query: 447 HIFSWLLLTPEQLQNT--PG-------------IAKSKSAQLWHQFNLARKQPFTRWVMA 491 + L ++L P + + L N +R + R + + Sbjct: 485 NYADLYRLNVDELAELTWPRLRKGKGDEMIEVQFGRKNAESLVAGINESRTRGLARVLSS 544 Query: 492 MGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGS 548 + I A L + + L + + + G A ++++ + + S Sbjct: 545 ISIRHIGPRVAKLITAKFWNLDLLRSAKAEDLAAIHEIGDRIAESLVKFIHSESGSQTLS 604 Query: 549 WLAAQQITGFE 559 L A +T E Sbjct: 605 DLDAVGVTMSE 615 >UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DNLJ_XANOM Length = 841 Score = 513 bits (1321), Expect = e-144, Method: Composition-based stats. Identities = 120/651 (18%), Positives = 220/651 (33%), Gaps = 128/651 (19%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE-PRDVMMPPLNG- 89 E L+++I+ D Y+ E+ D YDQL L + ++ + D + G Sbjct: 7 ERARELRRRIENADHRYYDLADPEITDAQYDQLFRELQELEQKYPELVTADSPSMRVGGA 66 Query: 90 ------AVMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKVDGVAVTLVY 134 V H + + D+ + ++ + V+PK DG+A++L Y Sbjct: 67 VRKSFVKVRHSIPMLSLANAFDEVEVKNFVDRIFRRMGSSNPLEFSVEPKFDGLAISLRY 126 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQ 192 GK + ++RG+G GED ++ + I +VP + G A ++GE+++ R+G + Sbjct: 127 ELGKFVQGVTRGDGDVGEDVSENIRTIRSVPLKLKGNNVPAILEVRGEVYMPRDGFSEFN 186 Query: 193 MGG--------INARAKVAGLMMRQDDSDTL-NSLGVFVWAWP--------------DGP 229 N R AG + + D + L F + Sbjct: 187 KRAMARGEKLLANPRNGAAGSLRQLDSRISAQRPLSFFAYGVGLIQVEQDLFEEIPQSIA 246 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEP 287 S L +L GF ++ + V+ +D + + LPF DGVV + Sbjct: 247 STHSAMLAQLRAWGFPVS-SLVEVVQGSDGLLAYYQRIGEARDGLPFDIDGVVYKLDDLA 305 Query: 288 ESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 R ++ W +A K+ Q V+AI+ +G++G + VA L PV + V Sbjct: 306 GQREMGFVSRAPRWALAHKFPAQEQSTTVEAIEIQIGRTGAATPVARLKPVHVAGVIVTN 365 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV----------WRGAERTKPTPPE- 394 + + + D+ GD ++V AG IP + VV W+ + E Sbjct: 366 ATLHNADQIARLDVRVGDTVIVRRAGDVIPEVAAVVADQRPPATQSWQMPTQCPVCGSEI 425 Query: 395 --NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEA------------------ 434 ++ C Q +++ + +DG+GE Sbjct: 426 VREEGQAVWRCSGELTCPAQRKEAFRHFVSRRAMDVDGLGEKFIEVLVDSGVVQGVADLY 485 Query: 435 --GWRALHQTHRF---EHIFSWLLLTPEQLQ----------------------------- 460 L Q E ++L E L Sbjct: 486 LLTVDQLLQLRMISTAESPHAFLREAREHLASGAYAQLEATLVGIGVDLAGEREVPQTWQ 545 Query: 461 -------------NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNAS 504 N IA + L +R R++ A+GI A ++ Sbjct: 546 ADLLRAGLPTFDWNRKKIATKWAENLIEAIETSRDTTLERFLFALGIEHVGESTAKALSA 605 Query: 505 DERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + ++++P G AR + + + +K L A+++ Sbjct: 606 WFGDLDLIRHLPWPLFKRVPDIGGEVARSLGHFFDQPGNQKAIDHLLARKV 656 >UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_ARTS2 Length = 790 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 120/626 (19%), Positives = 225/626 (35%), Gaps = 98/626 (15%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVM 83 +EE L +++++ Y++E + D +D+L RL + S ++V Sbjct: 51 VREEYENLVEEVRKHRFAYYQEDAPIISDAEFDELFRRLETIEAMHPELVANDSPTQEVG 110 Query: 84 M--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRER-------------SDLWVQPKVDGV 128 AV H + + L W+ + + K+DG+ Sbjct: 111 GEVSAAFAAVEHLQRMYSLEDVFSLEELESWIAKAEASVAKLGNGTAGPAWLTELKIDGL 170 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQRE 186 AV L+YRDGKL +A +RG+G GED T V I +PQ ++G A ++GE+F+ + Sbjct: 171 AVNLLYRDGKLVRAATRGDGYTGEDITHNVLTIKEIPQQLTGGNYPAEMEVRGEVFIPSK 230 Query: 187 GHIQQQMGG--------INARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQL----MS 233 + N R AG + ++D ++T L ++V L S Sbjct: 231 AFAEYNEALIEAGKAPLANPRNAAAGSLRQKDPAETAKRPLRMYVHGIGAREGLRTVSQS 290 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPESR- 290 D ++LA G + Y + + ++ + + L DG+VV+ R Sbjct: 291 DTYRQLAEWGLPTSP-YFEVLGSLKDILDFIKRYGDKRHSLTHEIDGIVVKVDDFATQRA 349 Query: 291 -HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 + W VA+KY P ++ I VG++G+++ + PV + V + Sbjct: 350 LGYTSRVPRWAVAYKYPPEEVHTKLLDIAVNVGRTGRVTPFGIMEPVKVAGSTVGMATLH 409 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP------------------T 391 + + + GD +++ AG IP I V ++ P Sbjct: 410 NQDVVKAKGVKIGDIVVLRKAGDVIPEIVGPVLALRDQQDPPVRDFVMPTECPACGTPLA 469 Query: 392 PPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHR-----FE 446 P + + C S C Q R+ + ++ ++ +G AL Q Sbjct: 470 PGKEGDVDIRCPN-SRSCPAQLRERVFHVASRGAFDIEALGWEAAIALTQPAEPVTPPLT 528 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKS------------------------------AQLWHQ 476 + LT E L + + +S +L+ + Sbjct: 529 SEANLFRLTREDLADVRIRREKRSKGVATGEFELVPYFYTKGTAKSPSKPTATTEKLFTE 588 Query: 477 FNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQ 533 A+ QP R ++A+ I + A+ S + ++E+ + G G A Sbjct: 589 LEKAKSQPLWRVLVALSIRHVGPRASRALATAFGSMDAIREASEEELAHVDGVGPVIAAA 648 Query: 534 VIEWKENAQIKKLGSWLAAQQITGFE 559 + EW +++ A + + Sbjct: 649 LKEWFAEDWHREIVDTWAEDGVRMED 674 >UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_BLASB Length = 681 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 113/573 (19%), Positives = 237/573 (41%), Gaps = 54/573 (9%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN------- 88 +L++++ +++ Y+ S++ D +D+ L ++ + E D P + Sbjct: 27 QLRKELSKYNYQYYNFDTSDISDFHFDKKLEELFFLEKKYP-EFYDPTSPTIKIGAEIHE 85 Query: 89 -GAVM-HPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGVAVTLVYRDGKLN 140 V H ++K K L +W ++ S + K DGV++ L+Y++G L Sbjct: 86 PSTVFYHKYKMYSLQKTYSKKELIIWKKKISKSIHTFSFVCELKYDGVSINLIYKNGFLT 145 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQMG---- 194 A +RGNG KGED T+ + I VP + G A ++GE+FL + I+ Sbjct: 146 NAGTRGNGEKGEDVTENIKTIKHVPLKLRGNNYPAYLEIRGEVFLTTKNFIEINKKRIKS 205 Query: 195 ----GINARAKVAGLMMRQDDSDTLNSLGVFVWAWPD-----GPQLMSDRLKELATAGFT 245 N R +G + QD +F A+ + LK + GF Sbjct: 206 GKTPYANPRNTASGTLKIQDRKKV-RQRNLFCIAFHVVGKNLPFDTQYESLKHIKNWGFQ 264 Query: 246 LTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLV 301 + +T R KN +EV + W WK +LP+ DG+V++ + + + W + Sbjct: 265 IPET-ARFCKNMEEVFHFIDFWNLWKDKLPYQIDGIVIKVNEYQKQSLLGFTNKYPRWAI 323 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 A+K++ ++ ++ F VG++G ++ VA++ P+++ ++RV + + Q+ I Sbjct: 324 AYKFRQKLSETKLLSLTFQVGRTGIVTPVANVVPILISGTIIKRVALYNDSFIQKMGIYH 383 Query: 362 GDQILVSLAGQGIPRIDDV-VWRGAERTKPTPPENRFNSLTC-----------YFASDVC 409 GD +L+ G IP++ + + + + + P + +C Y + C Sbjct: 384 GDTLLLEKGGNIIPKVTRINIKKRSSQAFPVFFLKK--CPSCNSVLTKNNELFYCTNQNC 441 Query: 410 QEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSK 469 Q I ++ + + + + IG + L++ ++ L E+L G+ + Sbjct: 442 FSQRIEKIRHFVSVKAMNIQKIGNEMIKKLYKKGFLYSFYNLYELKKEELLQIDGVKEKL 501 Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASD---ERSWSQLLFSTEQFWQQLPGT 526 + + + +++ PF+R + A+GI ++ + L+ + + G Sbjct: 502 ADSIINNIKKSKENPFSRVLYALGIRHVGEDISKKLTKQFLDINSLMHANYDHLISISGI 561 Query: 527 GSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 G +I + + + L + + Sbjct: 562 GKKITESIITYFSIYENRHAVQMLIKYGLHFSK 594 >UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA Length = 667 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 102/578 (17%), Positives = 208/578 (35%), Gaps = 55/578 (9%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMMPP 86 E I L + + ++ DY+ V D YD+ L ++ G S + Sbjct: 6 ERIKELVEILNKYSYDYYVLDNPSVSDKDYDKKYDELKLLEKETGVVLPYSPTLRIGDIV 65 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLW----------------VQPKVDGV 128 L+G H + K + + W K DG+ Sbjct: 66 LDGFNKYTHKGKLWSLDKAQSLDEIKDWHNRNIKFVNDMRAQGEDLPDLKYIATKKFDGL 125 Query: 129 AVTLVY-RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 V L Y +G L + +RGNG GE+ T +V I ++P + + GE + +E Sbjct: 126 TVNLTYNEEGMLEVSATRGNGEIGENVTAQVKTIKSIPLKLQENHDLFEVHGEAIMTQEA 185 Query: 188 HIQQQMGGINA----RAKVAGLMMRQDDSDTLNS-LGVFVW--AWPDGPQLMS--DRLKE 238 + + R AG + + +T L F + + +G Q + + + Sbjct: 186 FEKYNSSADSPLKNLRNGAAGALRNLNVKETARRDLSAFFYDVGYKEGYQFKTYLEMMDF 245 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAK--EPESRHWLP 294 + G + Y + + +++ + E + +L + DG+V+ E + Sbjct: 246 IKEKGLPV-DDYLKVCVSIEDIKNEIDYIEKIRFDLNYDIDGLVIAIDDIRTRELLGYTV 304 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 +W +A+K++ ++ +++ VG+SG+I A L PV L V+R + ++ Sbjct: 305 KFPKWAIAYKFEAQEATTKLVDVEWNVGRSGRIGPTAILEPVELAGVTVKRATLNNMDDI 364 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-----------Y 403 + + G + + + IP I + E ++ P C + Sbjct: 365 KRKGVRIGADVFIRRSNDVIPEIMGTLENTLENSEEIFPPT--ECPACGSHVVLNGAHYF 422 Query: 404 FAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNT 462 + C+ Q + +V ++ + + G E L + + I L E L N Sbjct: 423 CENTLSCKPQLVKTIVHYASRDAMNIAGFSEKTAEQLFEKLNIKSISDLYKLKKEDLINL 482 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 K+ L + +++ ++ A+GIP A + +S L +T + Sbjct: 483 EKFGDKKAENLLNAVEGSKECKLYSFIYALGIPNVGVKTAKDIVNKFKSIDGLKNATFEE 542 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + G A+ +IE+ + ++ L + + Sbjct: 543 LVSVQDVGDIVAQDIIEFFKEEKVISTIDELLSLGVNP 580 >UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_ANAPZ Length = 677 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 109/587 (18%), Positives = 202/587 (34%), Gaps = 62/587 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM 84 S ++ ++ L Q+K D Y + E+ D YD L + F Sbjct: 1 MSDNDSRRRLADLNAQLKLHDVLYHEHDAPEISDAQYDALVQEKRELLEKFPELSAYNDY 60 Query: 85 PPLNG---------AVMHPVAHTGVRKMVDKNALSLWMRERS-----------DLWVQPK 124 + G + H + + ++ + +PK Sbjct: 61 EGVIGALTVDARLPKIAHREPMLSLENSFTIQDVEKFISRVKRSLNMDPEVSITIACEPK 120 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQ 184 +DG++ +Y G L + +RGNG GED T +I +P ++ ++GEI++ Sbjct: 121 IDGLSFAALYEKGSLIRVATRGNGHLGEDITNTAKVIRKLPHKIANAPEVLEVRGEIYMH 180 Query: 185 REGHIQQQM--GGINARAKVAGLMMRQDDSDTLNSLGVFVWAWP---DGPQLMSDRLKEL 239 + + N R AG + RQ + + A+ LK+L Sbjct: 181 HSDFEKLKDVCNFANPRNAAAGSI-RQLNPKIAEERNLRYVAYCIVNSALASQEAILKQL 239 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWLPG 295 A GF T T N D+ + ++ L + DG+V + Sbjct: 240 AEWGF-CTHTEVLFADNMDDALSFHTRMYNTRSTLGYDIDGIVYKVNDTHLQKLLGSTSK 298 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W A K+ + +++ I VG++G I+ +A L P+ + V R ++ ++ Sbjct: 299 YPRWATAHKFPSTEAITKLRDISVQVGRTGVITPIAELEPINIGGTLVSRASLHNLNEIA 358 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPEN---RFNSLTC---------- 402 DI GD ++V AG+ IP++ V R PE + +C Sbjct: 359 RKDIRIGDSVIVKRAGEVIPQVVGV--DHTARCNSAVPEEYVFPSHCPSCGSTLSRAPGE 416 Query: 403 ----YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE- 457 A CQ Q + R+ ++ L + G+GE ++ L + Sbjct: 417 VAMRCTAELSCQAQVLERVKHFVSRDGLNIVGLGEKQIEFFCNASYISNVADIFSLREKI 476 Query: 458 ---QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 L G + A L + N + + ++ A+GI A L A RS+S Sbjct: 477 SHMNLSAEHGWGEKSIALLINAINASTTVKLSNFIFALGIRFIGKGAAKLIAEHYRSYSA 536 Query: 512 LLF-----STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 + + + + G G + + + ++ L + Sbjct: 537 WVRAMTSLANGEDPDNIHGIGLKSIESLRAFFSSEDNLRVLQTLEEK 583 >UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN Length = 696 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 106/578 (18%), Positives = 234/578 (40%), Gaps = 54/578 (9%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 E+I +L++ + ++ D Y+ + KS + D +D L L + + S V Sbjct: 29 EKIVKLREDLNKYRDSYYNDNKSLISDYEFDILLKELESLEEKYPQYKEISSPTTSVGAS 88 Query: 86 PLNGA---VMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKVDGVAVTLV 133 V H + + + ++ ++ K+DG++++L Sbjct: 89 LKENKFKKVEHLHPMLSLANSYNIGEIVEFIERIKKKIPKEQELKYCLEVKLDGLSISLT 148 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM 193 YR GKL +A++RG+G GED T+ + I+++ +T+ + + ++GE+ L + Sbjct: 149 YRQGKLVRAVTRGDGFIGEDVTENILEIASIVKTLPQAI-DMEIRGEVVLPLASFEKLNN 207 Query: 194 G--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLKELA 240 N R +G + + D L + + + G + S+ +K L Sbjct: 208 ERLEKGEELFANPRNAASGTLRQLDSKIVKDRGLDAYFYFLVEADKLGLKSHSESIKFLE 267 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP--ESRHWLPGQ 296 + G T + ++ + ++ + N W + LP+ TDG+V++ + + + Sbjct: 268 SMGIKTTGIF-ELLETSKDIEKRINYWEKERESLPYETDGLVIKVDEINLWDEIGYTSKT 326 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K+ + + + VG++GK++ VA L V L KV+R ++ ++ Q Sbjct: 327 PRWAIAYKFPAHQVSTVLNDVTWQVGRTGKLTPVAELQEVELSGSKVKRASLHNISEIQR 386 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWR---GAERT--KPTPPENRFNSLTC-------YF 404 DI GD++ + A + IP++ + G E+ +PT + L Sbjct: 387 KDIRIGDRVFIEKAAEIIPQVVKAIKEERTGNEKVIEEPTCCPICNHKLEREEGLVDIKC 446 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNT 462 ++ C + + + ++ L + G+G + + L E L+N Sbjct: 447 INEECPAKVQGEIEYFVSRDALNIMGLGSKIVEKFIDLGYIKTVVDIFDLKNHREALENI 506 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRA---ALNASDERSWSQLLFSTEQF 519 + K L + ++ + + + + A+GI + A ++ +L+ T + Sbjct: 507 DKMGKKSIENLLNSIEESKNRDYDKILYALGIAEIGKVTSKILAKASKNIDKLMAMTFED 566 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + G G A ++I + + +K+ L + + Sbjct: 567 LTSIEGIGEIAANEIIAFFTKEKNQKIIQGLKEKGLKF 604 >UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM Length = 670 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 114/572 (19%), Positives = 224/572 (39%), Gaps = 50/572 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE--PRDVMMPP 86 A++EI L +++ + + Y+++ E+ D YD + R + S P V P Sbjct: 2 EAKKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKDRYLKLLEANPSLGFPVVVGYPA 61 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERS---------DLWVQPKVDGVAVTLVYR 135 V H +R + + L ++ + + +PK+DGV+ + Y Sbjct: 62 SEKFQKVKHLSPMLSLRNIFSEEELVEYIEKTKRFLNLKSALEFLCEPKIDGVSFSARYV 121 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 +GKL +RG+G GE+ + +I+ P + ++GE+FL + Q G Sbjct: 122 NGKLVSCATRGDGKIGENIIDNMKVINGFPIEIMDVPDLLEVRGEVFLDHDTF-QTLEGF 180 Query: 196 INARAKVAGLMMRQDDSDTLNSLGVFVWAWP----DGPQLMSDRLKELATAGFTLTQTYT 251 N R AG + RQ + + N + +A+ DG + D L L+ GF +T Sbjct: 181 SNPRNAAAGSL-RQLNPEITNERNLQYFAYSASKIDGIEHQEDVLHFLSGRGF-MTNPLR 238 Query: 252 RAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWKYQP 307 A E+ + ++++ + DG+V + L W +A K+ Sbjct: 239 LASSKVPEIMSFYDSVYRRRSQIKYDIDGLVYKVNDLKLHARLGTLSDAPRWAIAHKFPS 298 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 ++ I+ +VG++G I+ VA L P+ + + R ++ + + DI GD ++V Sbjct: 299 HRAKTILEKIKLSVGRTGIITPVAHLKPITIGGVVISRASLYNEDELERKDIREGDLVIV 358 Query: 368 SLAGQGIPRIDDV--VWRGAERTKPTPPEN----------RFNSLTCYFASDVCQEQFIS 415 AG IP++ +V +R + P + + T S C EQ I Sbjct: 359 ERAGDVIPKVLEVDISYRTNQERFIFPDKCPSCSSTLIRKNNEAATRCNNSKKCPEQVIQ 418 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTPGIAKSKSAQL 473 ++ L + Q +DGIG + + L ++++ G + + Sbjct: 419 QIKHLVSAQAFDIDGIGTSHISFFIEKGFISEPADIFRLDKHRDEIKKYDGWGEKSVENI 478 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFS---------TEQFWQ 521 +RK +++ ++GI + A +S++ TE + Sbjct: 479 LKNIKNSRKISLEKFIFSLGIKNIGEKTAYMLAQQFKSFANWFDKMSMLKDDTQTEDEIR 538 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 L G GS ++++ ++ + L+ Sbjct: 539 NLDGMGSCICESLLDFFSDSDNCNMVKSLSNH 570 >UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNLJ_CAUSK Length = 792 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 119/601 (19%), Positives = 205/601 (34%), Gaps = 90/601 (14%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVM 83 + A+A EE+ RL + D Y ++ + D YD L R + F RD Sbjct: 8 DLTEAQAAEELERLADDLAAHDLRYHQQDAPTISDAEYDALKRRNLDIEDRFPHLVRDNS 67 Query: 84 MPPLNGA--------VMHPVAHTGVRKMVDKNALSLWMRERSDLW----------VQPKV 125 GA V H V + + + + +PK+ Sbjct: 68 PSMRVGAARAEQFSPVEHGVPMLSLDNAFSNDEATEFDARIRRFLRLTNEPVFYTAEPKI 127 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-------LANSTLQ 178 DG++ +L Y G L + +RG+G GED T + I+ +P + G ++ Sbjct: 128 DGLSASLRYEKGVLVQGATRGDGRMGEDVTANLRTIADIPHRLRGGDPQGGGWPDVIEIR 187 Query: 179 GEIFLQREGHIQQ--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP--- 226 GE++++ E Q N R AG + + D + L F +AW Sbjct: 188 GEVYVELEAFAAFNAAALEAGQRTYANPRNFAAGSLRQIDPKISAQRPLRFFAYAWGLTS 247 Query: 227 -DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRA 283 + L +L GF T V++A + + E + +L F DGVV + Sbjct: 248 EGFAATQWEALGKLRDWGFVTTAPPAERVQDAQGLLDIYAKFEVERPKLAFDIDGVVYKV 307 Query: 284 AKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + R ++ W +A K+ ++AI VG++G I+ VA L PV + Sbjct: 308 DDLEQQRRLGFVSRSPRWAIARKFPAQQARTILEAIDLQVGRTGAITPVARLKPVTVGGV 367 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLT 401 V + + D+ GD +++ AG IP+I V ER P Sbjct: 368 SVTNATLHNADEIARKDVRIGDTVILQRAGDVIPQIVGPVLE--ERPAGAVPFEFPTHCP 425 Query: 402 CYFASD---------------------VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALH 440 C+ + C Q I L +++ ++G+GE A Sbjct: 426 CHLETPLVRESTAAGAETVVRRCSGEFACPFQRIEHLRHFVSRRAFDIEGLGEKQLAAFF 485 Query: 441 QTHRFEHIFSWLLL-----TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 + + L +L+ G ++ A L R R + +G+ Sbjct: 486 EEGWIKEPADIFKLARDEAKLAELRERDGYGETSVANLVKGIEARRTIGLDRVIYGLGMR 545 Query: 496 LTRA---ALNASDERS------WSQLLFSTEQ-----------FWQQLPGTGSGRARQVI 535 + A + S + L + E+ PG G +++ Sbjct: 546 DIGETTSTVLARNFASPKGKGGFEDLQAAAERAAGQLPGAVYLELAGAPGVGPKARDELV 605 Query: 536 E 536 E Sbjct: 606 E 606 Score = 43.7 bits (102), Expect = 0.018, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 18/68 (26%), Gaps = 11/68 (16%) Query: 497 TRAALNASDERSWSQLLFSTEQ-----------FWQQLPGTGSGRARQVIEWKENAQIKK 545 A W + Q + G G A+ + + A ++ Sbjct: 637 PARVALAERYGDWDTFAQALAQAGQGAPGEDYLQLAAIDGIGPVAAQSIARFFAEAHNRE 696 Query: 546 LGSWLAAQ 553 + L A+ Sbjct: 697 KVANLIAE 704 >UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia floridanus RepID=DNLJ_BLOFL Length = 594 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 116/585 (19%), Positives = 227/585 (38%), Gaps = 66/585 (11%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNG 89 + + L++++ + Y+ + +S+V D YD L L Q + + Sbjct: 4 IKNRVQILRERLNYLEYLYYVKSESKVSDEEYDILLEELRQLEFKYPYLITKSSSTQSIS 63 Query: 90 AV--------MHPVAHTGVRKMVDKNALSLWMRERS--------------DLWVQPKVDG 127 V H + + DK+ L L+ + + K+DG Sbjct: 64 NVCDNSLNRIRHQKPMLSLNSIRDKSQLLLFDKRIKYKLSNHYNINQNLIVYCCELKIDG 123 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIF 182 VA++++Y+ GKL A +RG+G GE+ T+ V+ I ++P+ + ++GEIF Sbjct: 124 VALSILYKQGKLVHAATRGDGKIGENVTKNVNAIDSIPKNLKKNNNEILPDLLEIRGEIF 183 Query: 183 LQREGHIQQQMG--------GINARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDG----- 228 + + + NAR +G + + D T L SL + Sbjct: 184 ISKLSFSKLNQEMLSSGKKVFSNARNAASGSLRQLDPHVTELRSLVFCCYGISYYAGLKQ 243 Query: 229 -PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK 285 P RLK G ++ Y + V D V N ++EL + DG+V++ Sbjct: 244 LPNSHWGRLKLCNRWGLSINN-YIQIVSGIDPVLEYYNYVRKIRSELEYQIDGIVIKIDN 302 Query: 286 --EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 + W VA+K+ ++ ++ + F VG++G I+ +A + PV++ + + Sbjct: 303 CIYQDQLGCGFRAPNWAVAYKFPAELKLTKLNDVVFKVGRTGLITPIAYINPVVIGNVII 362 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS-- 399 ++VN+ +V + ++ GD ++V +G IP+I ++ R PE + Sbjct: 363 KKVNMHNVNEVKRLNLMIGDTVIVQRSGDVIPKILKIILENRVDNAKFIKIPEFCPSCGS 422 Query: 400 -----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 L C A C Q S L +++ + + G+G L Sbjct: 423 ILKVEDNKSSVLRCL-AKLTCLAQRKSALKHFASRKAMNIQGMGSRVINQLVDKGLICTP 481 Query: 449 FSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASD 505 + L+ E+L + + +L +A++ + ++ A+GIP ++ A Sbjct: 482 VDFFSLSKEKLLCLDRYGEKSAERLLQSILIAKEITLSAFIYALGIPGVGESVSNKLAYM 541 Query: 506 ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWL 550 R+ L+ + Q + QL G A + + + L Sbjct: 542 YRTIENLMNADLQSFLQLKFIGKIAAMNIYSFLHQSDNYNNIQGL 586 >UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=DNLJ_AKKM8 Length = 794 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 122/557 (21%), Positives = 214/557 (38%), Gaps = 66/557 (11%) Query: 17 SVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 + P + A I L+ ++++ + Y+++ + E+ D YD L L + ++ Sbjct: 32 NAGTDHPGNAEDPAHRRIDYLRSELRRHNRLYYEQAEPEISDAEYDALFLELEKLEKAHP 91 Query: 77 ------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVD-------KNALSLWMR------- 114 S R V PL G + H V + + + L+ + Sbjct: 92 ELSDPDSPTRRVGGAPLQGFNQIRHAVPMLSIDDIFEQRDAPVPDEELAEFYHKLSRALQ 151 Query: 115 -ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-GPL 172 E + V+PK+DGVA++++YR+GKL A +RG+G G+D T V I +VP T+ G Sbjct: 152 TENVPVSVEPKIDGVALSIMYRNGKLAYAATRGDGDVGDDVTANVRTIRSVPLTLPPGAP 211 Query: 173 ANSTLQGEIFLQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVW 223 ++GE+F+ E + N R AG + + D L Sbjct: 212 PVLEVRGEVFMPNEAFAKLNEERDADGLPAFANPRNATAGTLKQLDPRQVAARPLAFLAH 271 Query: 224 AWP--DGPQL--MSDRLKELATAGFTLTQT--YTRAVKNADEVARVRNEWWKAELPFVTD 277 +GP+L D L G + YT ++++ + R + + LP+ TD Sbjct: 272 GLGAYEGPELRDAKDFWNMLRHCGIPCNEPVYYTDSLESTRQAVRDIDR-LRHTLPYGTD 330 Query: 278 GVVVRAAKEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 G V++ + E+ W A+K+ P + + I VG++G ++ VA L P Sbjct: 331 GAVIKISSTATREALGATARAPRWAAAYKFPPEQKETTLLNIVVQVGRTGVLTPVAELQP 390 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE---RTKPTP 392 V+L V R + + D+ GD +LV AG+ IP + V R Sbjct: 391 VLLSGSTVARATLHNQDEIDRKDVRIGDTVLVEKAGEIIPAVLKVNLSKRPQDARPYSIL 450 Query: 393 PENRFNSLTC-------------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRAL 439 + C + C Q ++ + ++ L ++ IG + AL Sbjct: 451 EATKGLCPACGNPIMKEEGKVAWRCTNFTCPAQAVTGITHFCSRSALDVESIGSSVAEAL 510 Query: 440 HQTHRFEHIFSWLLLTPEQLQNT--------PGIAKSKSAQLWHQFNLARKQPFTRWVMA 491 + L P+QL N + + + AR P RW++A Sbjct: 511 RSSGLASSALDLFSLMPDQLANLNLGTPEEPRRYGEKNARKALDALQNARGLPLERWLIA 570 Query: 492 MGIPLTRAALNASDERS 508 GIPL + + + Sbjct: 571 FGIPLVGEVVAKALADT 587 >UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB Length = 676 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 106/576 (18%), Positives = 214/576 (37%), Gaps = 58/576 (10%) Query: 33 EISRLQQ--QIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 EI L++ ++ + Y+ + K V D +D L + +R + S + + Sbjct: 7 EIEYLKKIDLFQRHNKHYYDKNKPIVSDQEFDLLKKDIIDLERKYKFLKSEYSPTKSIGF 66 Query: 85 PPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-----------RSDLWVQPKVDGVAVT 131 P + H V + ++ L + ++ + +PK+DG++ + Sbjct: 67 KPSKNFQKIKHKVPMLSLGNAFNEEDLKNFEKKIINFLSLKDVNTIEYSAEPKIDGISAS 126 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFLQREGHI 189 L+Y DGKL K +SRG+G +GED TQ + I +P + S ++GE+F++ Sbjct: 127 LIYIDGKLTKGLSRGDGNEGEDITQNLKTIKDIPLEITKSNFPKEIDIRGEVFIENNDFK 186 Query: 190 QQQMGGINARAKVAGLMMRQDDSDTLN-SLGVFVWAWPD----GPQLMSDRLKELATAGF 244 + + N R +G + +++ T L + + + + L+ L GF Sbjct: 187 KIKDKFANPRNAASGSLRQKNSLITAKIPLKFIAYTYGYEKKMNIKNQTSFLENLKLWGF 246 Query: 245 TLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLV 301 + + + + + E + EL F DG+V + + W + Sbjct: 247 KTNPFNKKIIGVKNLMLNHKELEEKRKELAFDIDGIVYKVNDFDLQKRLGFAANAPRWAI 306 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 A K+ + ++E+ I+ +G++G ++ VA + PV + V + + DI Sbjct: 307 AHKFSANSSISEIMNIEIQIGRTGALTPVAKIKPVNIGGVIVSNATLHNEDEIVRKDIRV 366 Query: 362 GDQILVSLAGQGIPRIDDVVWRGAERT---------KPTP-----------PENRFNSLT 401 GD + V AG IP + V + ++ P+ + + Sbjct: 367 GDTVTVERAGDVIPHVVSVDLKKRKQNSKKFIFPLKCPSCGSKTIKDYNETTKRQDAVRR 426 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 C C++ I R+ +K +DG G+ L +++ Sbjct: 427 CASEGFECEKIAIERIKHFVSKDAFNIDGFGKKIVENFWNLKLVRLPQDIFKLNYNKIEE 486 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFST-- 516 G K A L + R++ ++GI A L A ++ S + Sbjct: 487 LEGWGKLSVANLRFSIEEKKNISLERFIYSLGIRHIGQENAKLIARHLKTASNFFRLSGE 546 Query: 517 --EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWL 550 + + G G + + + ++ N K+ S L Sbjct: 547 KNIESLSNIDGIGITQIQSIKKFFLNKTNLKVLSEL 582 >UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=DNLJ_NAUPA Length = 656 Score = 503 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 109/562 (19%), Positives = 226/562 (40%), Gaps = 53/562 (9%) Query: 38 QQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLNG-- 89 +K+W Y+ V D YD+L + ++++ S + V L G Sbjct: 12 VDTLKKWAYYYYVLDNPLVTDEEYDKLYHEVEEYEKKHPDKIDPTSPTQRVGDVVLEGFE 71 Query: 90 AVMHPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGVAVTLVYRDGKLNK 141 H + + ++ W+ E +++PK DG ++ L+Y +GKL + Sbjct: 72 KAKHLSRMWSMEDVFNEKDFLDWVGRVKRILGHENFSFYIEPKFDGASLNLIYENGKLIR 131 Query: 142 AISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG------- 194 A +RG+G GED T I+++P + + ++GE+ ++++ + Sbjct: 132 AETRGDGEIGEDVTLNAKTINSIPLEIKEK-SLIEIRGEVVIKKDDFDKLNEERLKNGEP 190 Query: 195 -GINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG-----PQLMSDRLKELATAGFTLTQ 248 N R AG + + D T + + W G + S+ + + + GF Sbjct: 191 TFANPRNAAAGSLRQLDPKITAK-RPLIFYPWGVGVNSLNYERYSELMDYIYSLGFKEPP 249 Query: 249 TYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPE--SRHWLPGQAEWLVAWK 304 K+ V + +E+ + + DG+VV+ + + W+VA+K Sbjct: 250 K-RGVCKDIPCVEKKYDEFVKLRDSFEVMLDGMVVKIDEIKYHDILGYTQKYPRWMVAYK 308 Query: 305 YQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQ 364 + + + ++ + VG++G ++ VA L PV + V+R + + + DI GD Sbjct: 309 FPAIEKETIIEDVIVQVGRTGVLTPVAVLKPVEIGGVIVERATLHNFDEIERMDIRIGDH 368 Query: 365 ILVSLAGQGIPRIDDVV-WRGAERTKPTPPENRFNSLTC-----------YFASDVCQEQ 412 ++V +G IP+I V+ W+ KP P + C + C + Sbjct: 369 VIVIRSGDVIPKITKVLTWKRKGDEKPIP--RPTHCPVCGAEVLDEGALIKCQNLSCPAR 426 Query: 413 FISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQ 472 ++ +++ +K L ++G+GE+ + L++ + + L E L+ P A+ K+ Sbjct: 427 VVNTIIYFASKNCLDIEGLGESVAKLLYEHGLVKDVTDLFELKVEDLEKLPLFARKKAEN 486 Query: 473 LWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWS-QLLFSTEQFWQQLPGTGSGRA 531 L + R+V A+GI + + + + ++++ G G Sbjct: 487 LVNAIKSKVGVECWRFVNALGIEHIGEVASKKICEKFGVEFYKHAPEEFEEIEGFGPEMV 546 Query: 532 RQVIEWKE--NAQIKKLGSWLA 551 + + E+ +I+KL L Sbjct: 547 KSIAEYIRVNKEKIEKLIEILK 568 >UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=DNLJ_MYCA5 Length = 665 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 107/579 (18%), Positives = 222/579 (38%), Gaps = 52/579 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR------- 80 + + E+ LQ +I +WD+ Y+ VED +YD+ +L + + + S Sbjct: 5 EKIRNEVFELQAKINEWDNAYYNLDAPLVEDAIYDREILKLKKLEEQYSSYFSFEELANS 64 Query: 81 -----DVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMR------ERSDLWVQPKVDGVA 129 + L V H + K + + ++ +++PK+DG++ Sbjct: 65 PTQKINAKSSDLFKKVTHDSPMLSLNKAYTEEEIQKFIDNIKKVTPTFSFFLEPKIDGLS 124 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 +++ YR+G+L +A++RG+GL GED T+ + I +P+ ++ ++GE++L Sbjct: 125 ISIKYRNGQLFQAVTRGDGLVGEDVTENIKQIKNIPKEIAY-QKPLEVRGEVYLALSEFE 183 Query: 190 QQQMGG--------INARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQ----LMSDRL 236 + + N R AG + + D N L F++ + + Sbjct: 184 KINLNFQKENKPLMANPRNAAAGTLRQLDKEIVANRNLSAFLYNIVAPEDHNIFTILEAR 243 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRHW 292 L GF++T+ T K+ E+ + K L + TDGVV++ + ++ Sbjct: 244 DFLKNLGFSVTKEAT-YAKDLSEINSYIENFKHLKKTLDYETDGVVIKLNELQHYDALGA 302 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 +A+KY+P +K I VG++G ++ A L PV+L + + + + Sbjct: 303 TNKFPHSAIAFKYEPNTTTTVLKNIFITVGRTGLVTYNAELEPVILSGSCITFATLNNYQ 362 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS----------LTC 402 ++ + GD + + AG+ IP + +V + E T+ L Sbjct: 363 YIKDLKLNKGDLVYIKKAGEIIPCVIGLVNKKHEETEFNKFLKCPYCNSDLIETDTLLEQ 422 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQ 460 Y +++ C E +++ +K+ + L+ +GE E++ + L +++ Sbjct: 423 YCSNENCPEIRRKKIIHFASKKAMELNSLGEKNIDVFINEGLLENVIDFYKLKEKKDKIM 482 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTE 517 + + ++K R + + I + + AS S L Sbjct: 483 SLERFGTKSVMNILKSIEESKKNSLDRVIFGLSIKHIGSKVAYFLASKILKLSNFLDFDF 542 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 G + W + K L L + Sbjct: 543 DSLISYNEIGEKIISSLKNWVAKEENKNLVKDLLDNDVD 581 >UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT Length = 668 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 110/545 (20%), Positives = 211/545 (38%), Gaps = 41/545 (7%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 +E + W Y+ + + D YD+L ++ +++ S R + Sbjct: 4 DEYRSAVDTLNAWARAYYTDDRPIASDEEYDELYSQAEKFEEQNPELALSYSPTRRIGGA 63 Query: 86 PLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD----LWVQPKVDGVAVTLVYRDGKL 139 G + H + + D L W+ +V+PK DG ++ L Y G L Sbjct: 64 ISEGFSKLAHGAQMWSMEDIFDDADLLAWLARGEKSGAQFYVEPKFDGASLNLTYEGGVL 123 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH--------IQQ 191 A +RG+GL GED TQ I +VP + ++GE + + Sbjct: 124 ISAATRGDGLIGEDVTQNARAIKSVPLQIPYA-GRIEIRGETLIAKSDFDALNDERAANG 182 Query: 192 QMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGP---QLMSDRLKELATAGFTLT 247 + N R AG + + D + L W + L S ++ + + GF L Sbjct: 183 ESLFSNPRNAAAGSLRQLDSAIVAKRKLKFIPWGVGEHSLSFALHSQIMEFVRSLGF-LR 241 Query: 248 QTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPE--SRHWLPGQAEWLVAW 303 + R K+A E+ +A + DG+V+R + + + ++VA+ Sbjct: 242 DEFCRICKSASEIRAAYEALHSMRASKDLMLDGMVIRVNELSKCAQMGYTVKFPRFMVAY 301 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 K+ V +V ++ I VG++G ++ VA + V +D V + + + D Sbjct: 302 KFPAVEKVTRLREINLQVGRTGAVTPVAVVYSVNIDGANVSNATLHNFDEIARLGLMKND 361 Query: 364 QILVSLAGQGIPRIDDVVWRGAERT---------KPTPPENRFNSLTCY-FASDVCQEQF 413 + + +G IP+I V + + T P E + + C+ + Sbjct: 362 FVGIIRSGDVIPKITSVYKQRRDGTQSEISRPDRCPVCGEKLLDEGALIKCQNLDCKARV 421 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQL 473 I L++ +K+ + ++G+ +A L ++ + I L + L + G A K + L Sbjct: 422 IGSLIYFCSKKCMNIEGLSDATITQLFESGKISKIGDIYALGAQDLADLEGFADKKISNL 481 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQ-LLFSTEQFWQQLPGTGSGRAR 532 N ++ P R++ ++GI ++ Q L ++E +L G G AR Sbjct: 482 LGAINASKNAPLERFIASLGIEHIGEVAARKIAAAFGQDWLDASEDEILRLEGFGEAMAR 541 Query: 533 QVIEW 537 + E+ Sbjct: 542 SLAEF 546 >UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGZ2_LIBAP Length = 731 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 113/622 (18%), Positives = 224/622 (36%), Gaps = 93/622 (14%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG----SEP 79 A S +A++E+S L+Q+I DD Y++ K + D YD L R F SE Sbjct: 11 ALSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSED 70 Query: 80 RDVMMPPLNG-------AVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------V 121 + + + G V H + + K+ + L ++ W + Sbjct: 71 PNGPLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTL 130 Query: 122 QPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS-TLQGE 180 +PK+DG +T+ Y GK A RG+G GED + + I +P+ +S + ++GE Sbjct: 131 EPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGE 190 Query: 181 IFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQL- 231 +++ + + N R +G++ R + +D L FV ++ Sbjct: 191 VYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDITRYLNFFVHGLGKTSEIF 250 Query: 232 ---MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK- 285 + L+++ GF + R + NE ++ LP+ DG+V + + Sbjct: 251 AKGQYEMLQKMRCLGFPVNNG-VRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEF 309 Query: 286 -EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 + W+++ K+ + I +G++G ++ VA L PV + + Sbjct: 310 SLQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGALIT 369 Query: 345 RVNIGSVRRWQEW-----------DIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPT 391 + + + DI GD++LV AG+ IP++ D++ R + + Sbjct: 370 NATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQPFS 429 Query: 392 PPENRFNSLT-----------------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEA 434 P + C Q + RL ++ ++G+G+ Sbjct: 430 FPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGLGKQ 489 Query: 435 GWRALHQTHR----FEHIFSWLLLTPEQ------LQNTPGIAKSKSAQLWHQFNLARKQP 484 ++ L Q ++N G L+ N R Sbjct: 490 QLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRRNIS 549 Query: 485 FTRWVMAMGIPLTRAALNASDERS----------WSQLLFSTEQFWQQ---LPGTGSGRA 531 R++ ++GI A + S + + ++ W +P G A Sbjct: 550 LERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIA 609 Query: 532 RQVIEWKENAQIKKLGSWLAAQ 553 + ++E+ +N + L + Sbjct: 610 QAIVEFYQNPRNICAVEALLKE 631 >UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=DNLJ_BUCBP Length = 672 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 117/580 (20%), Positives = 233/580 (40%), Gaps = 55/580 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC-------FGSEPR 80 + I +LQ +I+ Y ++ D YD L L + ++ S + Sbjct: 2 KDIKNYILKLQDEIRYHAYLYHTLNSPKISDEKYDFLVIELQRLEKKCKYSVRFKDSPTQ 61 Query: 81 DVMMP--PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAV 130 V P H + + KN + ++ + + K DGVA+ Sbjct: 62 SVGSENLPEFKKFSHITPMLSLNNVFIKNDFLKFYKKIVNNITVEKIFFCSELKFDGVAI 121 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGH 188 L+Y +G L +A++RGNG +GED T V++IS+VP+ + G ++GEIF+ + Sbjct: 122 NLIYINGLLFRAVTRGNGYEGEDVTSNVNMISSVPKKLIGIDIPETLEVRGEIFMLKSDF 181 Query: 189 IQ--------QQMGGINARAKVAGLMMRQDDSDT-LNSLGVFVWA-----WPDGPQLMSD 234 + ++ N+R +G + ++ T L SL + + + + Sbjct: 182 KKLNVRLTKFKKKLFSNSRNAASGSLRHKNAKVTELRSLTFYCYGCGYCSYENFTDSHFL 241 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESR 290 RLK+L + GF ++ Y + DE+ R N + L F DG+V++ +S Sbjct: 242 RLKKLKSWGFPISD-YNFLHSSYDEILRFYNFIQNERYFLNFNIDGIVIKVDSICLQKSL 300 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 W VA+K+ ++ + I + VG++G I+ VA + P+ + +++V++ + Sbjct: 301 STTSKAPRWAVAYKFSDKIKITTIMNILYQVGRTGVITPVAQVTPIYISGVLIKKVSLHN 360 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDV-----VWRGAERTKPTPPENRFNSLT---- 401 + ++ GD + + +G IP I +V + R + + P + L Sbjct: 361 FNEIRRLNLNIGDSVFIKRSGDVIPHIIEVASKCKLQRNEDISIPKFCPECGSKLKVDSF 420 Query: 402 -----CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP 456 A C QF L + +K+ L + G+G L + L Sbjct: 421 SNIKIRCMAGLKCLSQFKKLLHYFCSKKGLNILGLGPKIIDKLVDLGYVSDLSDIFDLNV 480 Query: 457 EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASD---ERSWSQLL 513 L I KS + N ++ F++++ ++GI + + S + + + Sbjct: 481 SLLTKVENIGIIKSQNIIRSINNSKNVSFSKFLCSLGIFEVGSIVARSISNYFFTLDKFM 540 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 S+++ + + G G A + + + K + L+ + Sbjct: 541 NSSKEEFLLINGIGVNIADNLYNFINDEFNKNIIFKLSKK 580 >UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DNLJ_METNO Length = 829 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 125/652 (19%), Positives = 210/652 (32%), Gaps = 127/652 (19%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVM 83 + A+A+E L +I + D Y E + D YD L RL + F Sbjct: 13 EMTAAQAREAHESLSAEIAEHDRRYHGEDAPIISDAEYDALRRRLEAIEERFPELAGTGA 72 Query: 84 MPPLNG--------AVMHPVAHTGVRKMVDKNALSLWMR-----------ERSDLWVQPK 124 G V H V + + ++ ++ E +PK Sbjct: 73 ASVSVGAKASDKFAKVRHAVPMLSLGNAFAEEEITEFVERVRRFLGLPASEPLAFTAEPK 132 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS--TLQGEIF 182 +DG++++L Y G+L A +RG+G GED T V I +P ++G ++GE++ Sbjct: 133 IDGLSLSLRYEGGRLVTAATRGDGEVGEDVTANVRTIREIPHELAGDDVPEICEVRGEVY 192 Query: 183 LQREGHI-----QQQMG---GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG----P 229 L Q++ G N R AG + + D T L F +A + Sbjct: 193 LSHADFAAINARQEEAGRPLFANPRNAAAGSLRQLDPGITASRPLRFFAYAAGEMSSWPA 252 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAKEPE 288 + S + G + R A+ +A R E +AEL + DGVV + + Sbjct: 253 ETQSGLIGAFRRFGLPVNPRTKRCTSVAEMLAHYRAIETERAELGYDIDGVVYKVDEFAL 312 Query: 289 SR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 R ++ W +A K+ V ++AI+ VG++G ++ +A L PV + V Sbjct: 313 QRRLGFVARAPRWALAHKFPAQRAVTVIEAIEINVGRTGSLNPLARLKPVTVGGVVVSNA 372 Query: 347 NIGSVRRWQ-------------------EW----------DIAPGDQILVSLAGQGIPRI 377 + + + D+ GD ++V AG IP++ Sbjct: 373 TLHNEDYIRGIDADGNTIRSGINIWDGFRLREDVDLRQGSDVRVGDTVVVLRAGDVIPKV 432 Query: 378 DDVVWRGAERT------KPTPPENRFNSLTCYFA-------------SDVCQEQFISRLV 418 DVV T P +++ Y +C Q RL Sbjct: 433 ADVVLERRPADAVPYAFPETCPACGSHAVRAYNPRTGKLDSVRRCTGGLICPAQGQERLR 492 Query: 419 WLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL------------------------ 454 ++ ++G GE L + L Sbjct: 493 HFVSRNAFDIEGFGETYIATLFEAGLVRQPADLFRLDFEPLKAAIVARRQALSAERALAA 552 Query: 455 --TPEQLQNTPGIAK--SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDER 507 TPE + P + L R P R++ A+GI A A Sbjct: 553 GKTPEAKKAKPKANEEDKAIHNLLAAVEARRTIPLNRFIFALGIEQVGEATAKALAKHFP 612 Query: 508 SWSQLL---FSTEQ--------FWQQLPGTGSGRARQVIEWKENAQIKKLGS 548 L+ + LP G +++ E + L Sbjct: 613 DMPALMEGVRAAAACRPGPDWIELASLPRVGPTTRERLLAAAEAGETDLLAD 664 >UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=DNLJ_BUCCC Length = 587 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 120/574 (20%), Positives = 234/574 (40%), Gaps = 57/574 (9%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF---------GSEPRDVM 83 +I +LQ QIK + Y + D +YD+L +L Q ++ + V Sbjct: 7 QILKLQLQIKYHNYMYHTLDSPIISDILYDELYNKLLQLEKLYFKKKSLDKKIKLLDQVG 66 Query: 84 MPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW---------VQPKVDGVAVTL 132 L+ H + +R + + + L+ ++ + + K DG+AV L Sbjct: 67 AKKLHIFTEFFHKIPMLSLRSINNISDFDLFDKKIKEYFKHINVITYFCDFKFDGLAVNL 126 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGH-- 188 Y++G L A +RGNG GE+ T+ + +IS++P+ ++G ++GEIF+++ Sbjct: 127 FYKNGILISASTRGNGSVGENITKNILMISSIPKKIAGSNIPKKIEIRGEIFMRKSDFFI 186 Query: 189 ------IQQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWP-----DGPQLMSDRL 236 + + N R AG + + + L FV+ + RL Sbjct: 187 LNQSCKLSGKKEFSNPRNAAAGSVRQLNPEIVKKRKLNFFVYGFGLFDYNKKIDSHYQRL 246 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHW 292 ++ GF L + Y KN EV + +++L F DG+V++ K + Sbjct: 247 LQIKKWGFPLYKNYC-VCKNKKEVIHFYHYANKIRSQLDFEIDGIVIKLDSIKLQNNLGC 305 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 + +W +A K+ + + ++ I F VG++G I+ VA P+ L + + ++ +++ Sbjct: 306 IEKYPKWAIALKFFSLDKETKIFKISFKVGRTGIITPVAYFFPINLFGVSISKASLYNIK 365 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TKPTPPENRFNSL------- 400 + DI D + V AG IP+I +V+ + PT + L Sbjct: 366 TIKLLDIRLHDYVTVYRAGDVIPKIRNVLIHKRNKYTQKIIIPTYCPSCCTKLIFSDDLK 425 Query: 401 TCYFA-SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 TCY S C Q + RL++ +K L G+G+ L + LT ++L Sbjct: 426 TCYCPASFSCFSQNVKRLIYFSSKNGLNFKGLGKKNIIKLINYGYLYTPIDFFSLTVKKL 485 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFST 516 +N + S ++ +++ +++ ++GI A A RS + + Sbjct: 486 KNIFRMGDKLSEKIIKNIAFSKRVSLDKFICSLGIFGVGTSIAKRLAYYYRSVEKFFNTN 545 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWL 550 ++ G + +I + +N + + L Sbjct: 546 YDTLSKIDHIGYNISNAIISFLKNKSNRSIILKL 579 >UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=DNLJ_WIGBR Length = 591 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 104/578 (17%), Positives = 228/578 (39%), Gaps = 57/578 (9%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN 88 + + +I L+++I+ W+++Y+ + S V D YD L + ++ + + Sbjct: 9 KIKTKILNLRKKIEMWNNNYYVKNLSLVSDEKYDSTLFELNELEKKYSMFLNTSYSNKIV 68 Query: 89 GA--------VMHPVAHTGVR---------KMVDKNALSLWMRERSDLWVQPKVDGVAVT 131 + H + +K +L+ E+ + K+DG+A+ Sbjct: 69 AKNICNKFKKIKHLSNMLSLESIFNYKNLLNFHEKVKKNLFYNEKRYYCCELKIDGLAIN 128 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP----LANSTLQGEIFLQREG 187 L+Y++G L+ A +RG+GL+GED T+ I ++P + ++GE+F++ Sbjct: 129 LIYKNGILDSASTRGDGLQGEDVTKNALEIKSIPHILKKNNLSFPKKIEIRGEVFIKLST 188 Query: 188 HIQ--------QQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQL-------M 232 + ++ NAR +G + RQ + + + + + G Sbjct: 189 FNKINKMLKSKRKKLFSNARNMASGSL-RQINPKITKNRSLSFYGYGIGYVNEKKYYYDQ 247 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAA--KEPE 288 D LK + + G + + T K+ +EV + + L F DG+VV+ K + Sbjct: 248 HDALKLINSWGIPI-EKNTELCKSLNEVKNFYEKSIKIRDYLDFNIDGIVVKVNSMKLQK 306 Query: 289 SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 W +A+K+ + ++ + F VG++G I+ VA L PV ++ ++ Sbjct: 307 KLGCSSKYPRWAIAYKFSSEEKCTKILGVNFNVGRTGVITPVAKLKPVYFMGTIIKYSSL 366 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP-----TPPENRFNSLTC- 402 + + I D + + +G IP+I V++ + K T + C Sbjct: 367 HNKDIIDKLGIMINDTVCLKKSGDVIPKISRVIFEKRKNVKEIIFPKTCIFCKSKIEFCL 426 Query: 403 ------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP 456 +C Q L +++ L + G+G L + ++ L Sbjct: 427 RKKNLYCTGGFLCYAQRKQLLNHFVSREALNIKGMGNKIISQLIEKKIIKYPSDIFKLNT 486 Query: 457 EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLL 513 +++ G+ S L + ++ R + +GIP + A+ ++ S + Sbjct: 487 DKIIFLKGMGLKSSENLIKEIIKSKTTELYRVIYGIGIPNVGIYTSMNLANYYKNISNFI 546 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLA 551 ++ + + + G GS + + ++ ++ + + S L Sbjct: 547 NTSYEDLRSIKGIGSFTSNCIKKFLKDKRNISIISDLL 584 >UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LK14_HALO1 Length = 751 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 118/542 (21%), Positives = 212/542 (39%), Gaps = 55/542 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S A+ E L ++ D Y+ E + + D YD+L +L + S Sbjct: 1 MSDDTARAEYLGLVDELSDHDRRYYVEAEPIISDVEYDKLLKKLRAIEEEHPAWVVEWSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-------------RSDLWVQP 123 + V P++ V+ V + D++ L+ + + + V+P Sbjct: 61 TQRVGHSPISSFPKVVREVPMLSLDNTYDESELADFHQRVLRGLGLSGDEAGAVNYVVEP 120 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DG+ V L Y G +RG+G GED +Q + + +P + + + ++GE F+ Sbjct: 121 KIDGIGVELSYERGAFRLGTTRGDGRVGEDISQNLRTLRGLPLRLREEV-DLIVRGEAFM 179 Query: 184 QREGHIQQQMGGI--------NARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQL--- 231 R N R VAG + + D + V ++ G + Sbjct: 180 TRADFTALNEARAEAGEEPFKNPRNTVAGSLKQLDPRLVAERPMQVILYEVVGGERFARE 239 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNAD---EVARVRNEWWKAELPFVTDGVVVRAAKEPE 288 + L L G ++ +RA A EVA +AELPF DG+V++ + Sbjct: 240 HFEVLARLRELGLPTSEHNSRADSWAALKREVAAWAE--RRAELPFDVDGLVIKVNSFDQ 297 Query: 289 S--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 W +A+K+ ++ ++ VG++G ++ VA L PV + VQR Sbjct: 298 RDALGTTSKFPRWAIAYKFPAQQVTTVIEDLEVNVGRTGAVTPVAMLTPVEVSGTTVQRA 357 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPEN---------RF 397 ++ + + + I P D++L+ AG+ IP++ VV R +E+ P P Sbjct: 358 SLHNWDQIERLGIGPKDRVLLEKAGEIIPQVIAVVERASEQVFPRPSTCPSCGHGLIQEP 417 Query: 398 NSLTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP 456 + + C Q ++ L + + + +DG+GE +AL T ++ L+ Sbjct: 418 GRVALLCPNRLACPRQLLASLEFFAGRGQMNIDGLGEKVAQALLDTGLVSNVADLFALSK 477 Query: 457 EQLQNTPGIAKSKSAQLWHQFNLAR-KQPFTRWVMAMG---IPLTRAALNASDERSWSQL 512 E L + + L AR F+R + A+G I A A+ L Sbjct: 478 EDLLTLERFGEQSAQNLVDAIARARDSATFSRLLAALGVAHIGGVAARAIAAHYPDMDAL 537 Query: 513 LF 514 L Sbjct: 538 LA 539 Score = 43.7 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 17/43 (39%) Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 ++ G G A + + + + +++ L + + EP Sbjct: 625 DVLGEIEGVGRIMASSLESFLRDPEAREVLRLLRERGVNPREP 667 >UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ_MAGSM Length = 768 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 122/576 (21%), Positives = 221/576 (38%), Gaps = 59/576 (10%) Query: 29 RAQEEISR--LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP 86 R QE ++ + + ++ + D+Y + D L R + + + Sbjct: 95 RVQEGLAESVVVEAVQHYQDEY------GLSDLG--ALVGRPGALEGVARDVTQRLNQTL 146 Query: 87 LNGAVMHPVAHTGV----RKMVD-KNALSLWMRE---RSDLWVQPKVDGVAVTLVYRDGK 138 + P + RK D L LW E R + +PK+DG+A +L Y +G Sbjct: 147 SFVEPLQPPDTKSLLSSGRKAADILRRLRLWAAEQPQRVEYVAEPKLDGLAFSLTYAEGV 206 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFLQREGHI------- 189 L +A +RG+G +GED T I VP + +G A ++GE+++ Sbjct: 207 LVRAATRGDGQEGEDVTAHARTIQDVPLRLQGAGYPALLEVRGEVYMPLATFEKLNAEAR 266 Query: 190 -QQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWA--WPDGPQL---MSDRLKELATA 242 + + N R AG + + D T + L +F + + +G L ++ L L Sbjct: 267 ERGEKTFANPRNAAAGSLRQLDPKITASRGLRMFCYGTGYVEGGTLADRYAEILAALKGW 326 Query: 243 GFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAE 298 G ++ R V+ A + LP+ DG V++ + E ++ Sbjct: 327 GLRVSPEAER-VEGAQGCLAYTERLGEKRETLPYEIDGAVLKVDSQRLRERLGFVARAPR 385 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W +A+K+ + V+AI VG++G I+ VA L PV + V + + D Sbjct: 386 WAMAFKFPATEESTTVQAIDLQVGRTGVITPVARLEPVAVGGVTVTNATLHNFLELARKD 445 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERT--------------KPTPPENRFNSLTCYF 404 + GD+++V AG IP + V+ R + PT E +L C Sbjct: 446 VRVGDRVIVRRAGDVIPEVVRVIPRESHGALAVYKEPVACPVCGAPTEREGGETALRC-S 504 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ--LQNT 462 C+ Q + +++ + ++G+G+ L Q E I L ++ L Sbjct: 505 GGLTCRAQVKEGVKHFASRKAMNIEGLGDKLVALLMQAGLVERISDLYRLHEQRQVLVGL 564 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 + A L ++ Q R++ +GI A A+ S L+ +T + Sbjct: 565 ERLGGKSVANLLEAIEQSKAQSAARFLFGLGIRDVGVTLAGSLAAHFTSLDALMAATVED 624 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + G AR+V+ + A + L A + Sbjct: 625 LVGIEDVGEVVARRVVHFFAQAHHGAELAALRALGV 660 Score = 93.0 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 8/98 (8%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC------FGSEPRDVMMPP 86 + L++++ + Y S V D YD+L L + S V Sbjct: 5 RAAELRKRLNHYAHSYHTLDTSLVSDAEYDRLFRELQSLEAADPTLISADSPTHRVGGAI 64 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQ 122 L G V H VA + L + R + + Sbjct: 65 LEGFEKVRHRVAMLSLDNAFSAQDLVEFHRRVQEGLAE 102 >UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEU9_MYCFE Length = 664 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 109/573 (19%), Positives = 239/573 (41%), Gaps = 48/573 (8%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 A + +++I L ++ QW+ +Y+++ V D YD+ L Q ++ + S Sbjct: 4 AMNALDIKKKIIELSNKLNQWNKEYYQDNNPSVSDFEYDKALQELEQLEKKYPQFIYVNS 63 Query: 78 EPRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMR--------ERSDLWVQPKVDG 127 + + V+H + K D + + ++ E + ++PK+DG Sbjct: 64 PTQKLGSFADNKFKKVVHQKPMLSLSKAYDYSEIEKYVNNIEKLVPIEDINFSIEPKIDG 123 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 ++++L Y G LN+A++RG+G +GED T+ + I+++P+ ++ A ++GE+FL + Sbjct: 124 LSISLHYNHGFLNQALTRGDGHEGEDVTENIYQIASIPKIINYD-AELEVRGEVFLPKAE 182 Query: 188 HIQQ--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ----LMSD 234 + + N R +G + + D + L F++ + + Sbjct: 183 FQRLNENLIKAGEKPFSNPRNAASGTLRQLDPTIVKNRQLASFLYELVEPQKHNITTQEQ 242 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPE--SRHW 292 L+ + E A K +L + DG+V++ Sbjct: 243 ALEFFQKLNIPTNPYHKVVEVEELEEAISFFAEMKNKLNYDADGLVIKLNNLTYWNKMGK 302 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 + +A+KY+ ++ +K I+ VG++GKI+ VASL PV L+ V+ + + Sbjct: 303 TAKFPKHSIAFKYEVETAISTIKDIKTTVGRTGKITYVASLEPVELNQTIVRAATLHNYN 362 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE----RTKPTPPE-----NRFNSLTCY 403 ++ +I DQ+ + AG+ IP++ +V + ++ +T P +++ + Sbjct: 363 FIEDLNININDQVQIVKAGEIIPKVLALVKKQSKGVFGKTLECPSCGSVLVEIEDNVDQF 422 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQN 461 + C E I+ + +++ L + G+G + ++ + + I L ++L Sbjct: 423 CVNKNCPEMTINAIYHFASRKSLNIVGLGLITVKDFYKHNLVKSIEDIFNLHKHKDELLK 482 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ 518 A+ K L A+ F++ + A+GI A L + ++ +L+ ++ Sbjct: 483 LERYAELKVNNLLTNIGKAKDSTFSKVLFALGIKHVGERAAKLISKQYHNFDELICEKDE 542 Query: 519 --FWQQLPGTGSGRARQVIEWKENAQIKKLGSW 549 + G + E+ +N + KL Sbjct: 543 LAKISAINNIGPKILDSLKEYLKNEENVKLLRK 575 >UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=DNLJ_BUCAT Length = 676 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 105/579 (18%), Positives = 215/579 (37%), Gaps = 53/579 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQ-RCFGSEPRDVMMPP 86 +++I +L++ + +++ Y +S + D YD L +L + + + P D Sbjct: 2 TSTKDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQK 61 Query: 87 LNG-------AVMHPVAHTGVRKMVDKNALSLWMR---------ERSDLWVQPKVDGVAV 130 + + H + D N + + E + K+DGVA+ Sbjct: 62 VGSHILQKFKKIKHFSPMLSLENTFDVNGYLNFKKRIKKSIHNNEPLSFCCELKLDGVAI 121 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGH 188 +++Y +G +A +RG+G +GE+ T +I ++P + G ++GE+F+ + Sbjct: 122 SIIYEEGIFVRAATRGDGFEGENITSNARMIDSIPLKLKGIDIPKRLEIRGEVFMLKSNF 181 Query: 189 I--------QQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGP-------QLMS 233 I Q N R AG + D + T +F D Sbjct: 182 IKLNKKYKLNQNKYFSNPRNAAAGSLRHIDPNITAERKLIFSCHGCDFFVKTNKELTTHY 241 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW-KAELPFVTDGVVVRAAKEPESR-- 290 RL + + G + + + + + + + L F DG+V++ + Sbjct: 242 QRLMKCLSWGIPVNKEIVICSSDIEIIQFYKKIAQKRNFLDFDIDGIVIKVNSLELQKKI 301 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 W +A+K+ P ++ + ++F VG++G I+ VA PV + + + ++ + Sbjct: 302 GSTTKSPRWAIAFKFSPKERITTLNDVKFQVGRTGVITPVAYFNPVYISGVMISKASLHN 361 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPP-----------ENRF 397 + ++ D I + +G IPR+ +V+ R K P EN Sbjct: 362 KNEIERLNLHFNDTITICRSGDVIPRLLNVIEIRRCDNAKKIIFPSFCPVCNTELLENIE 421 Query: 398 NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 L + C Q L +K+ L + G+G L + ++ + L Sbjct: 422 EKLIRCHSGLTCDAQKKQALYHFFSKKSLYVVGLGPKIINELVEKGLVKNPIDFFYLKDI 481 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLF 514 L + K KS ++ + +K ++ A+GIP A A+ +L+ Sbjct: 482 DLIQLKNVGKRKSIKIINSIKKCKKTTLKCFIYALGIPGVGEVVAGKIANYFIKLDKLMN 541 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 S + G G + + + +++ L Q Sbjct: 542 SNILELNCISGVGKIISNNIFNYFSTISNREMVVKLIKQ 580 >UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL Length = 681 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 109/576 (18%), Positives = 234/576 (40%), Gaps = 47/576 (8%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-----E 78 S A++ I++L +I+ Y+ + + E+ D +DQL RL + F Sbjct: 11 TLSEKEAKKVIAKLADEIRHHQYLYYVKNQPEISDFDFDQLFKRLRDLEEEFPQFKDLNS 70 Query: 79 PRDVMMPPLNG---AVMHPVAHTGVRKMVDKNALSLWMRERSD---LWVQPKVDGVAVTL 132 P V+ L+ H + + + + L W+ + V+ K+DG ++ L Sbjct: 71 PTLVVGSDLDKDFEKFQHKLPVLSLINTYNDDELLDWVNKTDPDGLYSVEWKIDGASIVL 130 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 Y +G L ++RG+G G+D T + + +P + P+ L+GE+F+ + + Sbjct: 131 YYENGMLKNGVTRGSGGIGDDVTDNIRTVRNIPLRLPEPIT-VYLRGEVFMTFKDFEEFN 189 Query: 193 M----GGINARAKVAGLMMRQDDSDTL-NSLGVFVW-----AWPDGPQLMSDRLKELATA 242 N R AG + +++ +DT L +F + + + L +L Sbjct: 190 ELSSGKYANPRNLSAGSIKQKNSADTAKRPLRIFTYDATFPGFTKKFKTHQQILSKLEKL 249 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVRAAKEPES--RHWLPGQAE 298 F + N ++A ++ K + L F TDG+V++ + + + Sbjct: 250 TFPVPPDT--VFVNGSKIAETIKDFKKKKDTLGFPTDGLVIKLNDISKRDAQGYTSHSPR 307 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W A+K+ + + + + I +AVG++GKI+ + PV L V + + E Sbjct: 308 WARAYKFDAIMKESRIVDITYAVGRTGKITPRVEIEPVNLAGTTVTFATLHNQDYIDELG 367 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTK-----PTPPE---NRFNSLTCYFASDVCQ 410 + G + V+ G+ IP +++V+ G + K P+ + N + + + C Sbjct: 368 VGIGAIVRVAKRGEIIPAVEEVITPGKDVFKIPDYCPSCKTKTIKKENLVDLFCPNPDCP 427 Query: 411 EQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKS 468 ++ + +++ ++ + ++G+G+ L+ I L E+L G + Sbjct: 428 DRVKNGIIFYCQRKQMDIEGLGDKQIEFLYDHGYIRSIADLYDLKDQKEKLIEEEGFGEK 487 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIP----LTRAALNASDERSWSQLLFSTEQF----- 519 A +++ ++++ F + ++G+P L S ++L + Sbjct: 488 SLAIIFNGIEHSKQKDFRFLLPSIGLPELGHKVTELLIEHGIDSIDEILSIAKDKKRISS 547 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 ++PG G + E + +I KL + L + Sbjct: 548 LLEIPGIGPSTIKAFEENFSDKRILKLIARLKNAGL 583 >UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI Length = 699 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 120/596 (20%), Positives = 228/596 (38%), Gaps = 70/596 (11%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A++ + L +++++D Y+ + V D YD L + F Sbjct: 14 LTSDHAKKIVDFLALELQKYDQAYYSDNNPLVTDAQYDVLKNLNNKIVAKFPHLALVNDH 73 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDL---------WVQPKVDG 127 + V P V+H + +S ++ + + + K+DG Sbjct: 74 SKKVGFTPSAQFSKVVHLKPMLSLANGFCVEDISNFITKIQNFLKIDHCPKIVCEYKIDG 133 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 ++ Y G L A +RG+G GE+ T+ + I + PQT+ ++GEI++ Sbjct: 134 LSFNARYEYGVLTLASTRGDGQIGENITENLKTIQSFPQTLPITDKVFEVRGEIYITNND 193 Query: 188 HI-----QQQMGGI---NARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD-----GPQLMS 233 QQ++G N R AG + + D + T L FV+A + Sbjct: 194 FRVLNIQQQKLGKALFSNPRNAAAGSIRQLDPAITAQRPLKYFVYALGEVTNHHFASTQF 253 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK--EPES 289 + L++L+ F++ Y N + N + L F DGVV + E Sbjct: 254 ELLQKLSQLKFSVNTDYI-LSDNLHSMIEFYNNVATERNNLAFEIDGVVYKVNDFALQER 312 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 + +A+K+ + ++ I VGK+G ++ VA L P+ + + R + Sbjct: 313 LGATSTSPRFAIAYKFPALIGRTKITNITLQVGKTGAVTPVAWLIPINIAGVTISRATLH 372 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDV-----VWRGAER-----TKPTPPE----N 395 + + + DI GD + + AG IP+I+ V + +ER T P+ + N Sbjct: 373 NKQEIESKDIRIGDYVFLHRAGDVIPKINGVDLSARDTQSSERFIFPTTCPSCNQNLVVN 432 Query: 396 RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 ++ S CQ Q R+ +K L +DG+G+ + L +I LL Sbjct: 433 EGETVARCGNSLACQAQIYERICHFVSKDALNIDGLGKQRIQFLLDNKYIVNIVDIFLLE 492 Query: 456 P-------EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASD 505 +L++ G +L+ N A+ +++ A+ I A L A + Sbjct: 493 ENNKFLYSNKLEDIAGWGIKSVNKLFQNINQAKNVILDKFIYALAIKHVGKYSAKLLAKE 552 Query: 506 ERSWSQLL--------FSTE--QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLA 551 ++ + +TE + + + G G A Q+ ++ + L + L Sbjct: 553 FKTAKNFINQSLKLANNATEIYEKLRNIEGVGVKTADQLKQFFMVSANVNLITKLV 608 >UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=DNLJ_NOCSJ Length = 752 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 126/603 (20%), Positives = 219/603 (36%), Gaps = 74/603 (12%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMMPP 86 +EE + ++I++ Y+ ++D +D+ RL + F D Sbjct: 61 TDPREEHRLIAEEIEEARWRYYVLDSPTIDDADFDRRMRRLEALEEEFPELRTPDSPTQT 120 Query: 87 LNGAVM-------HPVAHTGVRKMVDKNALSLWMR-------ERSDLWVQPKVDGVAVTL 132 + GAV H + + W E L + KVDG+A+ L Sbjct: 121 VGGAVSTDFTSHPHLRRMESLDNAFSVEEVEAWYARLRRDGVEDPALLCELKVDGLAINL 180 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIFLQREG 187 +Y +G+L +A++RG+G GED T V I++VP ++G A ++GE+FL E Sbjct: 181 LYEEGRLVRALTRGDGTTGEDVTSNVKTITSVPHRLTGTDEFPVPALVEVRGEVFLPVEA 240 Query: 188 HIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSD 234 + N R AG + ++D T +LG+ + PQ S Sbjct: 241 FERLNESLLEAGKAPFANPRNSAAGSLRQKDPRITASRALGMVCHGIGERRGFEPQAQSH 300 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAE---LPFVTDGVVVRAAKEPESR- 290 LA G + R V V +P+ DGVVV+ R Sbjct: 301 AYDALAAWGLPTSD-QVRVVSTLKGVEGYIENAGARRHTIVPYEIDGVVVKVDDVALQRR 359 Query: 291 -HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A+KY P A++ I+ VG++G+++ A + P + V+ + Sbjct: 360 LGSTSRAPRWAIAFKYPPEEVNAKLLEIRVNVGRTGRVTPYAVMEPTKVAGSTVENATLH 419 Query: 350 SVRRWQEWDIA------PGDQILVSLAGQGIPRIDD-VVWRGAERTKPTPP--------- 393 + + D+ PGD +++ AG IP I V+ E +P P Sbjct: 420 NFYEVERKDVRPGGPGDPGDTVILRKAGDVIPEILGPVLALRPEGLQPWVPPTTCPSCGT 479 Query: 394 ---ENRFNSLTCYFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 E + + C Q R+ ++ ++ ++G+G AL + Sbjct: 480 PLVEQKEGDKDRRCPNHEKCPGQLRERVFFVASRNAFDIEGLGYEAAVALLDAEVIANEG 539 Query: 450 SWLLLTPEQLQNTPGI--AKSK----------SAQLWHQFNLARKQPFTRWVMAMGIPLT 497 L L P A K +L + A++ P R ++A+ I Sbjct: 540 DVFDLDAAALLRAPLFTRAPKKDEDGPQLSANGQRLLDNLDKAKQVPLWRVLVALSIRHV 599 Query: 498 R---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQ 554 A++ S + + +TE+ G G A VIEW + ++ Sbjct: 600 GPKAGRALATEFGSMAAIRAATEEQLAAAEGVGPTIAEAVIEWFKEPWHVEIVDKWERAG 659 Query: 555 ITG 557 +T Sbjct: 660 VTM 662 >UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 Length = 676 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 117/567 (20%), Positives = 226/567 (39%), Gaps = 51/567 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 ++EI L+ I++W+ +Y+ + V D YD+ RL + + S Sbjct: 11 KDIEDEILCLRDNIRKWNKEYYVDSSPSVSDLTYDKALLRLQDLESKYPEYKTLDSPTLK 70 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE----------RSDLWVQPKVDGVA 129 LN V H + K D L LW+ + + + V+PK+DG + Sbjct: 71 FGSDLLNNFEEVTHSFPILSLDKAYDIKELLLWIEKMVLEGSSLGSYTGISVEPKIDGCS 130 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 + L Y+DG L KA++RG+G G D T+ V I VP ++ + L+GEI++ +E + Sbjct: 131 IVLYYKDGILQKALTRGDGRVGNDVTENVRTIKNVPLSIDEKV-ELVLRGEIYITKENFL 189 Query: 190 QQQMGGINA----RAKVAGLMMRQDDSDTLN-SLGVFVWAWPD---GPQLMSDRLKELAT 241 + N R +G++ R + + + L +FV+ G D +L Sbjct: 190 KINHTLKNPYLNARNLASGILRRINSREVASFPLDIFVYDILYSSFGLSTNHDAFDKLKK 249 Query: 242 AGFTLTQTYTRAV--KNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPES--RHWLPG 295 GF + + + KN +E+ E + L + DGVV++ + Sbjct: 250 FGFKINP-FCKFFGGKNLEEITNHVKKIEMQRNSLEYEIDGVVLKVDSFILRDILGYTSH 308 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 +W VA+K++ V+++ I VG+SGKI+ VA + V + + ++ + Sbjct: 309 HPKWSVAYKFESCTGVSKIVDIVVQVGRSGKITPVAHVEKVFVAGAFITNASLHNQDYID 368 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTPPENRF----NSLTCYFASDV 408 + GD + +S G IP ++ VV + G+ + P + + + Sbjct: 369 SIGLNVGDVVAISRRGDVIPAVELVVEKLSIGSFKISSNCPSCKMALIKEGSHLFCVNKH 428 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKS 468 C + I ++ + +K+ + + G+ L + ++L N G Sbjct: 429 CPYRIIEQIKYFCSKKCMNIVGLSGKTIEFLFEMKFISSEIELYTFNFDRLINLRGFDLK 488 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNA----SDERSWSQL------LFSTEQ 518 + L + ++ +PF + ++ MGI A ++ S+ + + Sbjct: 489 RIDNLKRSISDSKGRPFRKLLLGMGIKELGANTILVLINNNLNSFDIISTLCKNKEAALA 548 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKK 545 ++ G G A +IE + I Sbjct: 549 KLLKIKGIGEKIALNIIEAFNDKIILD 575 >UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CUT6_BACTU Length = 669 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 105/575 (18%), Positives = 228/575 (39%), Gaps = 50/575 (8%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVM 83 +++I +L++++ + D Y EG + D YDQ+ L + S + + Sbjct: 2 IEQKIKQLREEVMKHDLLY-DEGTPIITDSEYDQMYYELVSLEEKHPEFADENSPTKRIY 60 Query: 84 MPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-RSDLWVQPKVDGVAVTLVYRDGKLN 140 ++ + H K + + + + ++ K DG+ + L Y +G Sbjct: 61 SVVVDSLKKIKHSTPMLSQDKGHTEEDIVKFANKSDDEIIAGDKEDGLTIVLKYNNGIYY 120 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI--NA 198 +A +RG+G GED T V I+ +P+ +S ++ E + + + G + Sbjct: 121 EASTRGDGYIGEDVTHTVRTITNLPKKISFK-GYLEVRAESVIPFSEFERINVDGKYKSP 179 Query: 199 RAKVAGLMMRQDDSDTLNSLGVFVWAW------PDGPQLMSDRLKELATAGFTLTQT--Y 250 R V+G + R +++ G+ + A+ + +++L+ L GF + + Sbjct: 180 RNLVSGSV-RTLNANIAKERGLSIIAFDLVKAEGITFEKDTEQLEFLKEQGFNVVPYKVF 238 Query: 251 TRAVKNADEVARV---RNEWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWKY 305 + E+ + N+ + +P + DG+V++ ES + W A+K+ Sbjct: 239 KNTPEGIKELIQYCLTYNKEVRPTIPHMIDGLVLKFNNLAVRESLGYTSKFPRWGFAFKF 298 Query: 306 QPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQI 365 + ++ I VGKSG+I+ PV +D +Q+ ++ + +E DI GD I Sbjct: 299 DSLDATTKLLNIVETVGKSGQITPNGIFEPVEIDGVTIQKASLANYDNIKERDIRIGDTI 358 Query: 366 LVSLAGQGIPRIDDVVW--RGAERTKPTPPENR----------FNSLTCYFASDVCQEQF 413 +V+ A IP+I V R + PP +++ + + C Q Sbjct: 359 VVARANDVIPQIVSAVTELRDGTEKEILPPTCCPVCKGEVVKEEDNVHYFCINSTCSAQQ 418 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSA 471 L ++ + +DG+G ++ I L ++L G + K Sbjct: 419 ERILKHFVSRNAMNIDGLGAKTVETFYEKGILSSISDIYTLKDNLDKLSVLRGFGEKKIQ 478 Query: 472 QLWHQFNLARKQPFTRWVMAMGIPLTRAALN---ASDERSWSQLLFSTEQ------FWQQ 522 ++ ++ P ++++ A+ IP ++ A ++ L+ ++ + Sbjct: 479 KMLSGIEESKHVPLSKFLYALAIPNVGSSTGKDIAKKFKTMRHLIELSKDPVVLKTELMK 538 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + G G A ++ + E + +L +L + T Sbjct: 539 IDGIGETVASSMVSYFEESHNIELIEFLYSIGFTM 573 >UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYX3_JONDD Length = 798 Score = 487 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 126/646 (19%), Positives = 224/646 (34%), Gaps = 120/646 (18%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNG- 89 QE+ RL + I+++ +Y+ +G+S V D YD L A L + G P+ + G Sbjct: 54 QEQWERLARLIQRYQFEYYIQGESSVPDADYDALLAELVAVEEQLGGAPQGSPTQRVGGT 113 Query: 90 ------AVMHPVAHTGVRKMVDKNALSLWMRERS--------DLWVQPKVDGVAVTLVYR 135 V H + L W + K+DG+AV+L Y Sbjct: 114 FSTEFEEVDHRQPMLSLDNAFSLEELQAWADRVHGELSGGAVSYLCEVKIDGLAVSLTYE 173 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLA----NSTLQGEIFLQREGHI-- 189 G+L +A++RG+G GED T V I ++PQ + G A ++GE+F++ Sbjct: 174 RGELVRALTRGDGQTGEDVTLNVQTIRSIPQRLGGDPAFHPQVVEIRGEVFMKVADFADL 233 Query: 190 ------QQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGP-----------QLM 232 Q N R AG + ++D T + ++A G Sbjct: 234 NDSQARQGGKTFANPRNAAAGSLRQKDPRVTA-QRRLSMYAHGIGALEWDGQSPVDLARQ 292 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPE 288 SD G ++ ++ + D V R + + + DG V++ + + Sbjct: 293 SDVYALYQQWGIPVS-SHNSVEHDLDAVTRKIEYYRENRHSIEHELDGFVIKVDEVAAQK 351 Query: 289 SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 W +A+KY P + IQ VG++G+++ + PV++ V + Sbjct: 352 QLGSTSRAPRWAIAFKYPPEEVTTRLLDIQVNVGRTGRVTPFGMMEPVLVAGSTVSMATL 411 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS------- 399 + + D+ PGD ++V AG IP I V R + PP + + Sbjct: 412 HNFHEVRRKDVRPGDTVIVRKAGDVIPEILGAVESLRPDGLPQWEPPTHCPSCGTEIREA 471 Query: 400 ------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH---------- 443 L C A C Q R+ L ++ ++ +G AL Sbjct: 472 KEGDKDLRCPNA-QSCPSQLRERVFALASRGAFDIEALGWESAVALCDPESSRPVGPDAP 530 Query: 444 ---------RFEHIFSWLLLTPE-----------------QLQNTPGI-----------A 466 L E +L++ A Sbjct: 531 QLDGPPLTPVLTSEAHIFDLADENSSLTRSLKDVVVWRERKLKSGTRWELVPYFYTRATA 590 Query: 467 KSKS------AQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE 517 S +L+ + A+ QP R ++A+ I A A++ S ++ ++ Sbjct: 591 SKSSVPTATTVKLFEEVQKAKSQPLWRVLVALSIRHVGPTAARALATEFGSMDRIRAASV 650 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKK----LGSWLAAQQITGFE 559 + G GS A V+EW + + + A ++ + Sbjct: 651 SELAAVDGVGSTIAESVVEWFREVDGNQWRPAIVAAWAKAGVSMED 696 >UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7Y7_MYCHP Length = 668 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 109/554 (19%), Positives = 217/554 (39%), Gaps = 52/554 (9%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD---- 81 + ++EI LQ +I WD+ Y+ EV D +YD +L + + S D Sbjct: 6 DIEKIRKEIFDLQAKISAWDNAYYNLDSPEVPDEIYDVEFNKLKALEEKYASFFSDEELK 65 Query: 82 --------VMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDG 127 + L V H + K + + ++ +++PK+DG Sbjct: 66 NSPTRKINALASDLFKKVKHKRPMLSLNKAYSLDEIQKFIDNIKKITSDFSFFIEPKIDG 125 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 ++++++Y DGKL +AI+RG+G+ GED T V +S +P+T+ + ++GE++L Sbjct: 126 LSISIIYEDGKLVRAITRGDGITGEDVTANVVQMSCIPKTIEYK-ESLEVRGEVYLAISD 184 Query: 188 H--------IQQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSD 234 + + N R AG + + + +L F++ D + M + Sbjct: 185 FEKLNLKLGQENKNKLANPRNAAAGTLRQLNSQIIKERNLSAFLYYVVDPLQHNIKTMQE 244 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAEL--PFVTDGVVVRAAKEPE--SR 290 + L T GF +T A ++ + +L + TDGVV++ + Sbjct: 245 EHEFLKTYGFPVTHEVQHA-NTLQDIEEYIRNFKNQKLLIDYETDGVVIKLNEVQYFDKL 303 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 + +A+KY+P + +K I VG++G ++ A L PV + V + + Sbjct: 304 GSTAKFPHYAIAFKYEPNVETTTIKRIYATVGRTGLVTYNAELEPVEISGSLVSFATLNN 363 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE-----RTKPTPPE-----NRFNSL 400 + ++ ++ D + + AG+ IP + ++ E + + P + L Sbjct: 364 FQYIKDLNLNENDLVYIKKAGEIIPCVIGLISGKKEIDHFQKVEFCPYCHNKLVDSETGL 423 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQ 458 + ++D C E +L+ +K L ++ +GE + + L + Sbjct: 424 EQFCSNDQCPEIQRRKLIHFCSKDGLDINTMGERNIDLFLKNSLISNPIDIFNLKNKKQD 483 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 L + + + + + +P + + A+ IPL A AS +S LL Sbjct: 484 LLKLNRMGEKSIENILISIDECKNKPLYKMISALSIPLIGVKLAKFVASKIKSLHNLLNY 543 Query: 516 TEQFWQQLPGTGSG 529 G Sbjct: 544 DFSQLIDYHEIGDK 557 >UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_SANKS Length = 871 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 109/616 (17%), Positives = 199/616 (32%), Gaps = 107/616 (17%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVM 83 A+ + L + I+ Y+ V D YD L L + S + V Sbjct: 44 ARTRWAELAETIEAHQFAYYVRDAPTVSDAEYDTLLRELGDIEEAHPQLRTPDSPTQRVG 103 Query: 84 M--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLV 133 AV H + + L W + K+DG+A+ L+ Sbjct: 104 GTFSTDFAAVDHREQMLSLDNAFNAEDLDAWAERVHREIGTSQVHYLCEVKIDGLAIALL 163 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS----GPLANSTLQGEIFLQREGHI 189 Y G+L +A +RG+G GED T V I +P+ + ++GE+F+ + Sbjct: 164 YEKGRLVRAATRGDGRTGEDVTLNVLTIEGIPKALDASVREVPDLIEIRGEVFMLVDQFA 223 Query: 190 QQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW---------PDGPQL 231 N R AG + +++ T L ++ P + Sbjct: 224 ALNEAQVAAGKPPFANPRNAAAGSLRQKNPKITAGRPLRMYAHGVGALHWEAGTPSELRR 283 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES 289 SD G ++ + R V+ V + + + + ++ DG+VV+ + Sbjct: 284 QSDAYDYFRAWGVPVSD-HNRVVEGMPGVQEMIDYYGDHRHDIEHELDGIVVKVDELALQ 342 Query: 290 R--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 R W +A+KY P + I VG++G+++ + PV++ V Sbjct: 343 RQLGATSRAPRWAIAYKYPPEEVNTTLLDILVNVGRTGRVTPFGMMEPVLVAGSTVSMAT 402 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV---WRGAERTKPTPPEN--------- 395 + + + + GD +++ AG IP I V G+ER P E Sbjct: 403 LHNGSEVRRKGVLIGDTVVLRKAGDVIPEIVGPVVDLRDGSEREFVMPTECPSCGTTLAP 462 Query: 396 -RFNSLTCYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH---------- 443 + + + C Q R+ L + ++ +G AL Sbjct: 463 AKEGDVDIRCPNQRSCPSQLRERVFHLAGRGAFDIEAMGWEAAIALVDPEHNRPESADAE 522 Query: 444 -------RFEHIFSWLLLTPEQLQNTPGIAKSKSA------------------------- 471 E + + L + + K A Sbjct: 523 GVPVQVPVLETEAGFFDFEVDALADVLVWREKKKAGVGTGVWEQVPFFWTKATAKTPSKP 582 Query: 472 -----QLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQL 523 + + + A+ +P R ++A+ I A A+ S ++ +TE+ Sbjct: 583 SATTVKFFEEREKAKARPLWRVLVALSIRHVGPTAARALATAFESVEAIMAATEEELAAT 642 Query: 524 PGTGSGRARQVIEWKE 539 G G AR V W Sbjct: 643 EGVGPTIARAVRIWFN 658 >UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD Length = 669 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 125/585 (21%), Positives = 231/585 (39%), Gaps = 58/585 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 ++EI RL+ IK+W+ +Y+ + V D YD+ RL + + S Sbjct: 3 EDVEDEILRLKNIIKRWNREYYVDSSPSVGDLTYDKALLRLQDLESKYPEYKTLDSPTFR 62 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE----------RSDLWVQPKVDGVA 129 LN V H + K D LSLW+ + + + V+PK+DG + Sbjct: 63 FGSDLLNDFEEVKHSFPILSLDKTYDIKGLSLWIEKMVLESAISGLHTGISVEPKIDGCS 122 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 + L Y+DG L KA++RG+G G D T+ V I VP + + L+GEI++ +E + Sbjct: 123 IVLHYKDGILEKALTRGDGRVGNDVTENVKTIRNVPLRIDEKI-ELVLRGEIYITKENFL 181 Query: 190 QQQ----MGGINARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGP---QLMSDRLKELAT 241 + +NAR +G++ R + N L +FV+ D +L Sbjct: 182 KINRTLKNPYVNARNLASGILRRISSKEVANFPLDIFVYDILYSSLKLNTSHDAFDKLKQ 241 Query: 242 AGFTLTQT---YTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAKEPES--RHWLPG 295 GF + + A +A V+ E + + DGVV++ Sbjct: 242 FGFKVNPFCEFFGGKNLEAGIIAHVKKIEALRDSFEYEIDGVVLKIDSFILRKILGSTSH 301 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 +W +A+K++ +++V I VG+SGKI+ VA + V++ + ++ + Sbjct: 302 HPKWSIAYKFESCTGMSKVVDIVVQVGRSGKITPVAHVEKVLVAGASITNASLHNQDYID 361 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-----------YF 404 + GD +++S G IP +D V+ + A + P N +C + Sbjct: 362 FVGLNVGDIVVISRRGDVIPAVDLVIEKLAVGSFKIPS----NCPSCKMTLIKEGAHLFC 417 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 + C + I ++ + +K+ + + G+ E L + ++L N G Sbjct: 418 VNRHCSCRIIEQVKYFCSKKCMNIVGLSEKTIEFLFEKKFISSEVELYTFNCDRLINLKG 477 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIP-------LTRAALNASDERSWSQL---LF 514 + L ++ +PF + ++ MGI L N + + S L Sbjct: 478 FNLKRINNLKRSIEDSKSRPFRKLLLGMGIKDLGENTILVLINNNLNSFDTISTLCKNKE 537 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + ++ G G A +IE + I ++ + E Sbjct: 538 AALAKLLKIKGIGERIALNIIEAFNDKTILDKFNFFKELGLKMEE 582 >UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XES8_9HELI Length = 686 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 109/582 (18%), Positives = 207/582 (35%), Gaps = 77/582 (13%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR------CFGSEPRDV 82 ++ EE + + + Y++ D YD L + ++ S + + Sbjct: 5 KSHEEYLESIKTLNLYAKHYYELDDPIASDFEYDMLYKAVKLYEENNIDKIAKDSPTQRI 64 Query: 83 MMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRE------------------------- 115 L H + + + + L W+ + Sbjct: 65 GDKILKDFSKNKHKKRMWSLEDIFNPSDLDEWLTKLSNAIARVQKTTLSPTLFDTETQID 124 Query: 116 ---RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL 172 + PK DG+++ L+Y +G L A +RG+G GE TQ + ++P T+ Sbjct: 125 SINNLAFCISPKYDGMSLNLLYENGILQSATTRGDGEIGEVVTQNAKTLHSLPHTIPFK- 183 Query: 173 ANSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNSLGVFVWA 224 + ++GE+ L +E + N R AG M RQ DS+ + A Sbjct: 184 GSIEIRGEVVLSKENFARLNKEQERNNKALFANPRNAAAGSM-RQLDSNLTRERNLSFVA 242 Query: 225 WPDGPQLM--------------SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW-- 268 W G M D L L GF+ + R NA+ + R + Sbjct: 243 WGIGSVDMKELEKYAKRSNLGFYDMLMLLPEFGFSPFRYLERV--NAESIEREYQKILND 300 Query: 269 KAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGK 326 + PF+ DG V+ + + A+K+ V +++I VG++G Sbjct: 301 RDNYPFMLDGFVIVLDDLALQDKLGFTQKAPRFACAYKFPATEVVINIESITPQVGRTGI 360 Query: 327 ISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RG 384 I+ VA+ P LD + R + + + + DI D L+ +G IP+I V+ R Sbjct: 361 ITPVANFKPTPLDGAFISRATLHNYKEIDQKDIRIRDYCLLVRSGDVIPKITKVLHERRK 420 Query: 385 AERTKPTPPENR--------FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 + K P + + + Y + C ++L+ +K+ + +DG+G + Sbjct: 421 GDEIKIAKPTHCPICSHELSYEDIYIYCTNPNCDAIIKAKLIHFASKKCMDIDGLGSSII 480 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA-RKQPFTRWVMAMGIP 495 L + L E G + K+ L + + + F R++ A+GI Sbjct: 481 ELLVDNGVIKECKDIYSLKEEDFLRFEGFKEKKAQNLINAIKDSIENREFWRFIHALGIL 540 Query: 496 LTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 + ++ + Q++ G G A+ ++ Sbjct: 541 HIGEVASKKLASYGYEIFDYDIEKLQEIEGFGKDMAQSFYDF 582 >UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1_NOCFA Length = 663 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 124/566 (21%), Positives = 217/566 (38%), Gaps = 44/566 (7%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD------V 82 A E I L +I + Y+ EG V D YD + L D V Sbjct: 2 DAGERIRELADRIVELRTAYY-EGAPLVADAEYDAVEDELRALIAAHPELAPDPNPLDQV 60 Query: 83 MMP-PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--LWVQPKVDGVAVTLVYRDGKL 139 P L+ V H + K ++ + + V PK+DG+++ LVY DG+L Sbjct: 61 GAPAVLHAPVRHSRPMLSLEKATTPEQVAAFFERFPGQPVVVMPKLDGLSLALVYEDGRL 120 Query: 140 NKAISRGNGLKGEDWTQKVS-LISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG--- 195 +A++RG+G G+D T V L+ VP+ + P ++GE + R + Sbjct: 121 VRAVTRGDGTTGDDVTMLVRALVDGVPEQIDVP-GRVEVRGEAVMLRSTFLAYNAAHPDK 179 Query: 196 --INARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQLMSDRLKE-LATAGFTLTQTYT 251 IN R AG + +D + L F + + L E L G + Sbjct: 180 PLINPRNAAAGTLRAKDPATVAERRLRFFGFDLDTAEGGAAADLGEGLRALG--IAGAAM 237 Query: 252 RAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQP 307 R +A++ E + +L + DG V+R A +A+K+ Sbjct: 238 RMCADAEQAQAAITDIERGRNDLDYDIDGAVLRLADRDAYAAAGTRSNSPRGALAFKFAA 297 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 + ++A+ + VGK+GKI VA L PV + V + + + + + DI GD +LV Sbjct: 298 EEKTTVLEAVTWDVGKTGKIVPVARLEPVFVGGTTVTKATLANQQVIRARDIKVGDTVLV 357 Query: 368 SLAGQGIPRIDDVV---WRGAERTKPTPPENR----------FNSLTCYFASDVCQEQFI 414 AG IP + V+ R + PP NS + + C Q + Sbjct: 358 RRAGDVIPFVAGVLDASKRTGAEVEIVPPTECPSCGQPVTEQGNSRELFCTNASCPAQTV 417 Query: 415 SRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLW 474 RL+ ++ +D IG L + E+ + LT E+L I + + ++ Sbjct: 418 RRLIHWASRAAADIDAIGGVWIERLAEAGILENPSDFYTLTKERLLEFDRIGEVSATRMI 477 Query: 475 HQFNLARKQPFTRWVMAMGIPLTRAALNASDER----SWSQLLFSTEQFWQQLPGTGSGR 530 + +R R ++ + IP+ A R S ++ + E+ + G Sbjct: 478 ESIDRSRDVGLRRALIGLAIPMASEGTAARLARAGFASLEEVADAGEERLVAVEDIGPKV 537 Query: 531 ARQVIEWKENAQIKKLGSWLAAQQIT 556 A ++E +++ L + ++ Sbjct: 538 AASLVE--HLTRLRPELERLRERGVS 561 >UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQN2_9BACT Length = 718 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 122/618 (19%), Positives = 239/618 (38%), Gaps = 65/618 (10%) Query: 1 MKVWMAILIGILCWQSSVWAVCPAWSPARAQEE------ISRLQQQIKQWDDDYWKEGKS 54 ++VW+ + + I C S ++ EE + L+ +I + DD Y+++ Sbjct: 17 VRVWLLVSMCI-CLAGSFGVYSTFGDTSKLSEEERGRGRLVELRAEIARHDDLYYRKAAP 75 Query: 55 EVEDGVYDQLSARLTQWQRCFGSEPRDVMM--------PPLNGAVMHPVAHTGVRKMVDK 106 E+ D YD L L + + + +++ + G H + K + Sbjct: 76 EISDADYDALKRELHRLEELYPDLQDGLLIVDEIGDDRSGVRGEFRHFAPMLSLEKAYTE 135 Query: 107 NALSLWMR--------ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKV 158 AL + E D V+PKVDG+A++++Y G+ +A+SRGNG GED ++ V Sbjct: 136 EALLSFYDRVLSQLTFEELDCLVEPKVDGMAISVLYERGEFVRAVSRGNGRVGEDVSENV 195 Query: 159 SLISAVPQTVSG--PLANSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMR 208 I +P+ + P L+GE+++ EG + + R+ AG + Sbjct: 196 LRIEGLPRRLETESPPERVELRGEVYVSFEGFRRLNEARVAAGEEPFAHPRSLAAGSLKL 255 Query: 209 QDDSDTL-NSLGVFVWAWP------DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVA 261 D SL + + + + P+ S + G + + + +A Sbjct: 256 DDPEVVSERSLSIVFFGYGAFEPVEEAPETQSGFYGLAQSWGIPVLEELRKTRGTEALLA 315 Query: 262 RVRN-EWWKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQ 318 VR E + PF DG VV+ + R W +A+K+ + I+ Sbjct: 316 AVREMEERRVLYPFPMDGAVVKIDRADVQRELGLGTSAPRWAMAYKFAEKRVETRLLGIR 375 Query: 319 FAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRID 378 VG++G ++ VA L + L ++R ++ + + D+ GD + + AG+ IP + Sbjct: 376 IQVGRTGLLTPVAELEEIRLGGSSIRRASLHNGGVIERMDLRIGDVVYLERAGEVIPNVV 435 Query: 379 DV--VWRGAERTKPTPPENRFNS----------LTCYFASDVCQEQFISRLVWLGAKQVL 426 V R + TK P+ + + Y S C Q ++ + + + Sbjct: 436 GVNLAKRKSSSTKYVFPDLCPSCGYAAELDEGRVERYCRSSTCPAQAQRKIEHFASSRAV 495 Query: 427 GLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFT 486 G++GIG A L E + LL L +++ + +L + + +R Sbjct: 496 GIEGIGPAKIADLMDAGLVETVADLYLLEVPDLVQAGVGSEAVARKLVSEISGSRAASLW 555 Query: 487 RWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFW------QQLPGTGSGRARQVIEW 537 R + +GIP + A+ + ++ + ++ G G V+ + Sbjct: 556 RVLFGLGIPEVGVSRSKKLAAAYGDLAAFARASALDFSPGGRAAEV-GFGPVAREAVLAY 614 Query: 538 KENAQIKKLGSWLAAQQI 555 + ++L L + Sbjct: 615 LSLDENRELIGRLVELGL 632 >UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 Length = 853 Score = 480 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 124/660 (18%), Positives = 220/660 (33%), Gaps = 127/660 (19%) Query: 23 PAWSPAR---AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-E 78 PA +PA A + L+ +I++ D+Y+ S + D YD L L + + Sbjct: 16 PATTPADLEAASARVDALRTEIERHRDEYYGADASTLSDAEYDALVHELEALEEAHPTLR 75 Query: 79 PRDVMMPPLNGA--------VMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQ 122 +D + G V H + + + L+ W + R + Sbjct: 76 SQDSPTQTVGGRAETTLFAPVTHAERMLSLDNVFSEEELAEWAAKVERDAGSGRVRYLSE 135 Query: 123 PKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGE 180 K+DG+A+ L Y G L A +RG+G+ GED TQ V + VP+ + SG ++GE Sbjct: 136 LKIDGLAINLRYEHGVLVTAATRGDGVVGEDVTQNVLTMGTVPERLMGSGHPPLVEVRGE 195 Query: 181 IFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSD----------TLNSLGVFV 222 IF + N R AG + ++++ + L + V Sbjct: 196 IFFPVAEFDELNARQLEVGERVFANPRNAAAGSLRQKEEGKSPARLELMRARIRRLRMLV 255 Query: 223 WAWPDGP----------QLMSDRLKELATAGFTLTQTYTRAVKNADEVARV--RNEWWKA 270 P S+ LA G ++ T+ R + EV R+ +A Sbjct: 256 HGIGAWPVRELASDAHVSAQSEVYGLLAGWGLPIS-THFRVFDDISEVTEFVRRHGAHRA 314 Query: 271 ELPFVTDGVVVRAAKE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKIS 328 E+ DG+VV+ E W A+KY P + I +VG++G+ + Sbjct: 315 EVEHQIDGIVVKVDDLGLHEELGATSRAPRWATAYKYPPEEVNTTLLDIVVSVGRTGRAT 374 Query: 329 VVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR----- 383 A + V + +V++ + + + + + GD +++ AG IP + V Sbjct: 375 PFAVMEKVEVAGSEVRQATLHNQQVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELRDGT 434 Query: 384 ---------GAERTKPTPPENRFN-SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGE 433 E P P + L C A C Q R+ + ++ L ++G+GE Sbjct: 435 EREFVMPTLCPECQTPLRPAKEGDIDLRCPNA-RSCPAQVRGRVEHVASRGALDIEGLGE 493 Query: 434 AGWRALHQTHRFEHI-----FSWLLLTPEQLQNT---------------PGIAK------ 467 AL Q E LT L + Sbjct: 494 VAAAALTQPLEPEDPPLETEAGLFELTMADLVPITVVVRDAETGMVKVDEKTGEAKRVTP 553 Query: 468 ---------------------------SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR-- 498 + L + A+ Q R ++A+ I Sbjct: 554 FRRRRAPKRDGVFDPAAPWGDEDSVPSKSAEVLLENLDKAKTQDLWRILVALSIRHVGPV 613 Query: 499 -AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 A A S + ++ + + G G A +++W E +++ + Sbjct: 614 AARALAGWFGSLDAIRSASREELAAVDGVGGIIADALLDWFEVDWHREIVDRWRKAGVVM 673 >UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepID=D2AQV6_STRRD Length = 696 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 117/569 (20%), Positives = 217/569 (38%), Gaps = 63/569 (11%) Query: 48 YWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLNGAVMHPVAHTGVR 101 Y+ +G S ++D YD+L + ++ S V + G V H V + Sbjct: 30 YYGDGTSTLDDDAYDRLVRGIQAYEAEHPDEVLPTSPTGKVAGGAVVGDVPHTVPMLSLD 89 Query: 102 KMVDKNALSLWM--------RERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGED 153 + L+ W R ++ V+PK+DG+A+ YR G+L + ++RG+G GED Sbjct: 90 NVFGAGQLADWAASLERRLGRPVTEWSVEPKLDGLAIAARYRGGRLVQLVTRGDGTAGED 149 Query: 154 WTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH--------IQQQMGGINARAKVAGL 205 + + I +P ++ P+ L+GE+ + N R+ AG Sbjct: 150 VSHAIGTIVGLPARLAEPVT-VELRGEVMMTASQFEDACVKRQAHDGTTFANPRSAAAGT 208 Query: 206 MMRQDDSDTLNSLGVFVWA---WPDGPQL---------MSDRLKELATAGF---TLTQTY 250 + QD L F + +PD S+ + +A G +T Sbjct: 209 LRAQDRPYVCE-LTFFGYGALPYPDDTSEQAVQLRELPHSEVMTWVAGQGVQTPAVTDVG 267 Query: 251 TRAVKNADEVARVRNEWW--KAELPFVTDGVVVR--AAKEPESRHWLPGQAEWLVAWKYQ 306 +++ + + ELPF DG+V++ A + + W +A+K Sbjct: 268 GIVATTLEQIQERVEQIAAKRTELPFGIDGIVIKCDLAADQAQAGFSSRAPRWAIAYKLP 327 Query: 307 PVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQIL 366 ++ ++ +++ G+SG I+ A L PV LD V + +V + GD ++ Sbjct: 328 ATEKITKLLGVEWNTGRSGIIAPRAVLEPVELDGSIVTYATLHNVADITRRGLMLGDSVV 387 Query: 367 VSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----------LTCYFASDVCQEQFI 414 V AG IPR++ V R + P+ C C + I Sbjct: 388 VYKAGDVIPRVEAPVVHLRTGDEQPIAIPQVCPTCGDAIDASQERWRCVR-GRAC--RVI 444 Query: 415 SRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLW 474 + + + + L ++G+ E + L LT EQ+ + + + L Sbjct: 445 ASIGYAAGRDQLDIEGLAENRIQQLLDAGLIVDFADLFYLTREQVLGLERMGATSTDNLL 504 Query: 475 HQFNLARKQPFTRWVMAMGIPLTRAALN---ASDERSWSQLLFSTEQFWQQLPGTGSGRA 531 A+ QP +R A+G+ T +++ A S + + + + + G G +A Sbjct: 505 AAIERAKAQPLSRVFCALGVRGTGRSMSRRIARHFGSMDAIRAADAEAIEAVEGIGPKKA 564 Query: 532 RQVIEWKENAQIKKLGSWLAAQQITGFEP 560 V+ E ++ L L +T EP Sbjct: 565 PGVVA--ELVELADLIDKLVKAGVTMTEP 591 >UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXK5_RUMGN Length = 663 Score = 477 bits (1228), Expect = e-133, Method: Composition-based stats. Identities = 107/559 (19%), Positives = 214/559 (38%), Gaps = 43/559 (7%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN--- 88 + I L +Q+ ++ D Y+ E +S+V D YD+L L++ + G + + Sbjct: 18 KRIKELVEQLNEYRDAYYNEARSDVSDAEYDRLFDELSELENETGVVYTNSPTQSVGYEV 77 Query: 89 ----GAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 V H + K + L + ++ D + K+DG+ L Y +G+L +A + Sbjct: 78 KSELEKVKHSHPMLSLDKTKSVDDLVKFAGDK-DCILSLKMDGLTCLLTYENGELVQAET 136 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM------GGINA 198 RG+G GE T + +P ++ + ++GE + E + N Sbjct: 137 RGDGEIGELITHNAKVFENIPLSIDYK-GHFEIEGEAIITYEDFDKINKSLPDDKKYKNP 195 Query: 199 RAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSD----RLKELATAGFTLTQTY-TRA 253 R +G + RQ DS + AW + S RL+ GF R Sbjct: 196 RNLASGSV-RQLDSKIAAQRHIKFIAWKVPTDIASSSFINRLQYALDIGFDTVPFLPIRG 254 Query: 254 VKNADEVARVRNEWWK--AELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWKYQPVA 309 NA+ + V + K E F DG+V ES + +A+K+ + Sbjct: 255 NCNAEFINIVVEQLRKRAKEKSFPIDGLVATYNDITYGESLGMTGHHPKHSIAFKFAEDS 314 Query: 310 QVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSL 369 + ++ I++++GK+G ++ VA V L V R ++ ++ +E +I+ G + V Sbjct: 315 EETVLREIEWSIGKTGTLTPVAIFDSVDLAGTSVSRASLHNISIMKELNISIGSTVTVVK 374 Query: 370 AGQGIPRIDDVVWRGAERTKPTPPE---------NRFNSLTCYFASDVCQEQFISRLVWL 420 + IP+I + PT +S + C+ + + R+ Sbjct: 375 KNEIIPQIISCDANAMDADIPTTCPVCGGETRIVKENDSEVLMCVNPHCKGKLLGRVSHF 434 Query: 421 GAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQLWHQFN 478 +K+ + + G+ E + L + I L ++L G K +L Sbjct: 435 VSKKGMDISGLSEETIKKLIELGWITEITDIYNLDQYYDRLSTMSGFGKKSVDKLRTSIE 494 Query: 479 LARKQPFTRWVMAMGIPLTRAALNASD---ERSWSQLLFSTEQ--FWQQLPGTGSGRARQ 533 ++ +++ ++ +P + + +W + ++ + QL G G Sbjct: 495 NSKTVRLDKFIASLSVPGIGTSQSKELVKAFGTWDKFRDASVGYYDFTQLDGFGDVLNNN 554 Query: 534 VIEWKENAQIKKLGSWLAA 552 + W E+ + +LA+ Sbjct: 555 IHSWFEDMSN--IADYLAS 571 >UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_MYCMO Length = 671 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 94/561 (16%), Positives = 220/561 (39%), Gaps = 49/561 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDV 82 R E + L+ +I W+ Y+ + VED +YD +L +++ + S +++ Sbjct: 15 RIISEYNDLKNKINLWNKAYFDYDEPLVEDSIYDATLLKLIKFENQYKFLDNSDSPTKNI 74 Query: 83 MMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRER------SDLWVQPKVDGVAVTLVY 134 V H + K + L ++ R + +++ K+DG++++L Y Sbjct: 75 GAKVSKKFSKVQHQFPMLSLNKAYKFDDLKIFERHINKLGFFPNYFLELKIDGLSISLKY 134 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM- 193 +G L +A++RG+G+ GED T+ V I +P+ + ++GEI+L + + Sbjct: 135 DNGNLIQALTRGDGISGEDVTENVFQIQDIPKQIKY-SKPIEIRGEIYLSKSTFYEINEC 193 Query: 194 -------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG----PQLMSDRLKELAT 241 N R +G + + D S L F ++ + + +D+ L Sbjct: 194 QKSQNLTIFANPRNAASGSLRQLDSSIVKERKLNSFFYSVTNPLDHKIKNFNDQELFLKE 253 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEW----WKAELPFVTDGVVVRAAKEP--ESRHWLPG 295 F + + + V ++ ++ ++ +L + DG+VV+ + Sbjct: 254 NNFQV-PSLNKFVDTIEKAYEFIKDFEKNNYREKLNYEIDGIVVKVDDFSLYDILGQTSK 312 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 ++A+K+ ++ ++ I +VG++GKI+ A L PV+++ V + + + Sbjct: 313 FPRSMIAFKFSDISIETKLIDIFISVGRTGKITYNAILEPVIINGTLVSAATLHNYEYVE 372 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAE----RTKPTPPENR-----FNSLTCYFAS 406 + D + + AG+ IP++ + + +E R + N + + Y + Sbjct: 373 SLKLNKNDNVKIIKAGEIIPKVVSLSKKNSETIFKRIEYCTSCNEKLVQPEDEVDQYCIN 432 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ--LQNTPG 464 C + ++ +K+ + + G+G + L + +++ P Sbjct: 433 KKCLMIRLRKIEHFASKKAMNILGLGFQNIEKFFKLGILTKYSDLFFLEKYKNLIESQPS 492 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 + L N ++ +++ A+GI A L A++ + S L+ + Sbjct: 493 FGEKSFNNLIESINRSKSNSLEKFIFAIGIKQIGERSAKLIANEVKLLSNLINFDFEKLN 552 Query: 522 QLPGTGSGRARQVIEWKENAQ 542 + + + + Sbjct: 553 NIRDISCKTINSLKCFFSDEN 573 >UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8W2_9FIRM Length = 675 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 120/588 (20%), Positives = 220/588 (37%), Gaps = 61/588 (10%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 E L QI D Y+ + K+E+ D YDQL +L + S + + Sbjct: 4 ETYQELIDQINYHMDLYYNQDKTEISDYEYDQLMQQLKAAEAEHPDWVRPDSPSQKIGGT 63 Query: 86 PL---NGAVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGVAVTLVYRD 136 V H V + + D ++ W+++ + V+ K+DG+++TL YR Sbjct: 64 TKREAGVKVEHNVPMLSIEDVFDFQSVIDWVKKVQEMHPDAIFSVEQKIDGLSMTLRYRK 123 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG-- 194 G+L A +RG+G GED TQ I VP + L+GE+++ R+ Sbjct: 124 GRLELAETRGDGHIGEDVTQNARAIPQVPDKLPITDPYLELRGEVYMTRDRFEAYNARQE 183 Query: 195 ------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGP----QLMSDRLKELATAG 243 N R AG + + D T L +F++ DG + D L L+ G Sbjct: 184 KDEKPLAANPRNLAAGTLRQLDPGITAKRGLALFIFNVQDGEPHFMRSQLDNLDRLSAMG 243 Query: 244 FTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHWLPGQAEWL- 300 +T Y + NA EV E + +L + DG VV+ + + + G Sbjct: 244 LPVT--YHKRADNAKEVIAAIEEIGKMRDQLGYDIDGAVVKIDQIAYRKDFPAGAKYSAG 301 Query: 301 -VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA------PVMLDDKKVQRVNIGSVRR 353 +A+KY P +V E+ I VG++GK++ P L V R + + Sbjct: 302 HIAYKYPPEERVVEMDQILVDVGRTGKLTFTGQFHDVKTGGPARLCGTSVSRATLHNQDY 361 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA---ERTKPTP-----PENRFNSLTCYFA 405 ++ I G + +G+ IP+++ V + + P E + Sbjct: 362 IRQMKIGIGGHYKLFKSGEIIPKLNGCVKEPKAVFKAPQFCPVCGEELEQEEGTADIRCV 421 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH-------RFEHIFSWLLL--TP 456 + C Q + + + + + G+G+ AL Q L Sbjct: 422 NPSCPAQISRTIAYFAGRSCMDIAGLGQTLVDALCQEKITGSETFYLTSYVDIYRLREHR 481 Query: 457 EQLQNTPGIA-KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 + L + + + + ++ ++ Q TR + +GI AA + L Sbjct: 482 DSLISRGILGKEKNTDKILAAIEDSKSQRPTRLLAGLGIRNVGLSTAAALMAVYPDLMDL 541 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + + + Q +P G A ++ + + +++ + A +T P Sbjct: 542 MHAGFEDLQGIPDIGEKTAADIVHFFAHEDKRRMMADFRALGLTMRMP 589 >UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1BD54_CLOBO Length = 649 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 105/559 (18%), Positives = 210/559 (37%), Gaps = 43/559 (7%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-----GSEPRDVMMPP 86 + + L +++ + D Y+ K+ + D +D L Q ++ S + V Sbjct: 6 QRVKELIKELNEASDKYYNSDKTTMIDKEWDDKFDELKQLEQETEVILSNSPTQKVGYEV 65 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 + V+H + + K + L ++ +++ + K DG+ L+Y +G+L + + Sbjct: 66 KSKLDKVVHNIPLKSLGKTKSIDDLQKFIG-NNEILIMDKGDGLTCELIYDNGQLLQGST 124 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH------IQQQMGGINA 198 RGNG GED T V +P + L GE + E + ++ N+ Sbjct: 125 RGNGEIGEDITHNVKTFKNIPLQIDFK-GYLKLSGESVILDEDFELINAKLDEEDKYSNS 183 Query: 199 RAKVAGLMMRQDDSDTLNSLGVFVWAW------PDGPQLMSDRLKELATAGFTLTQTYTR 252 R VAG + RQ DS + V +A+ + ++L+ L+ GF + Sbjct: 184 RNLVAGSV-RQLDSKICDKRNVRFYAFSLLECGEAEFKTKEEQLEFLSRLGFETIEYI-- 240 Query: 253 AVKNADEVARVRNEWWKAELP--FVTDGVVVRAAKEPE--SRHWLPGQAEWLVAWKYQPV 308 N++E+ +V ++ K+ F DG+V S +A+K+ Sbjct: 241 KYDNSEELEQVISKMQKSAYEKGFPIDGLVFAYNNIEYANSLGDTLHHPLHSIAYKFYDE 300 Query: 309 AQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVS 368 + A ++ V ++G I+ VA PV ++ V+R + ++ +++ + GD I V Sbjct: 301 EYETKYIATEWQVSRTGMINPVARFEPVEIEGSVVERATLHNLDYFEDLKLGQGDTIKVI 360 Query: 369 LAGQGIPRIDDVVWRGAERTKPTPPENRF---------NSLTCYFASDVCQEQFISRLVW 419 A Q IP++ PT + + C + ISR+V Sbjct: 361 KANQVIPKVMSNDTMSNTEIIPTECPVCGGKTEEKLLKTARVLICINPECSAKHISRIVH 420 Query: 420 LGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQLWHQF 477 ++ + +DG+ E + I L E++ N G + Sbjct: 421 YCSRNAMNIDGLSEKTIEKFVNLGYLKDIDDIYKLEQYKEEIINIDGFGTKSYNNMIEAI 480 Query: 478 NLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQV 534 ++ ++ A+G+P A L +S +++ + + G G ++ Sbjct: 481 EKSKHCKLENFIFALGVPSVGLGTAKLLVKKFKSIEKVMNCNLEEIYSIDGIGDVVGNEI 540 Query: 535 IEWK-ENAQIKKLGSWLAA 552 + N L + L Sbjct: 541 YNYFIINKDSINLVNKLLK 559 >UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepID=DNLJ_MYCGA Length = 717 Score = 473 bits (1217), Expect = e-132, Method: Composition-based stats. Identities = 109/624 (17%), Positives = 229/624 (36%), Gaps = 96/624 (15%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 +E I L +++ +W+ +Y+ V D VYD L ++R + S + Sbjct: 9 ESIKEIIEDLVKKLTKWEHEYYVLSNPSVSDEVYDNTYRTLLGYERKYPQYVLSYSPTQR 68 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR--------ERSDLWVQPKVDGVAVT 131 V N V H + + L + E + ++PK+DG++++ Sbjct: 69 VGSSISNKFIKVKHDYLMLSLGNCFNFEELLNFNENIAKISKQEDNPYVLEPKIDGLSIS 128 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH--- 188 L+Y DG L++A++RG+G+ GE + I +P ++ + ++GE+++ + Sbjct: 129 LIYLDGVLSEALTRGDGVFGESVIANIKTIKTIPLKINTTIKKIVIRGEVYVSNQDFEAI 188 Query: 189 ---IQQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQLMSDRLKELA 240 + N+R +G + D S+ L F + P+ G + +++L Sbjct: 189 NASRDEDKKFANSRNYASGSLRNIDVSEVAKRKLNAFFYYIPNAYELGFETQYQVIQQLK 248 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESRHWLPGQ 296 GF + + + N E+ E K +L + DG V++ + E + Sbjct: 249 EWGFNVAKE-IKLFSNIKELYTSLKELENNKNKLDYRIDGAVIKYNNFKDYEIIGYTSKF 307 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 +W +A+K+ P ++K I VG++GK++ VA LAP+ L+ + + ++ + Sbjct: 308 PKWAIAYKFAPTQVQTQLKDIILNVGRTGKLTFVAQLAPIELEGSIITYATLHNLEYIND 367 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAER------------TKPTPPENRFNSLTCYF 404 DI D + + A + IP++ V + P + + Y Sbjct: 368 LDIRINDYVYLIKAAEIIPKVIGVNLDKRPNNAKKLEFDYNCPSCHQPLVKKPEEVDWYC 427 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH--------------------- 443 D C+++ + L++ +K ++ ++G+ E+ T Sbjct: 428 IYDQCKQKQLQYLIYYCSKPIMNIEGLSESTLALFFNTKVNDVIRECNELITNQNVSEDL 487 Query: 444 ------------RFEHIFSWLLL----------------TPEQLQNTPGIAKSKSAQLWH 475 + L + L+ + +L + Sbjct: 488 SLFKLLDNEEQTFVNSVLDIYQLERYKEIIIKPWLKKGFSKSSLKYNFRFQEKSFDKLIN 547 Query: 476 QFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRAR 532 N ++ + R + A+ I A A+ QL T + + +L S A Sbjct: 548 SINESKNRELYRLLAALNIKYIGIATAKSIANTYHDIDQLKNLTVEDYMRLADISSITAN 607 Query: 533 QVIEWKENAQIKKLGSWLAAQQIT 556 + + + + +L L I Sbjct: 608 SLFSFFSDEKNWELIEQLKTLSIN 631 >UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria (class) RepID=C6WRP3_ACTMD Length = 674 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 121/566 (21%), Positives = 212/566 (37%), Gaps = 43/566 (7%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD------VM 83 A+E I L ++ D Y++ G V D YD L D V Sbjct: 11 AEERIRDLADRVVSLRDAYYR-GSPLVADAEYDATEDELRSLIAANPELTPDPNPLDQVG 69 Query: 84 MP-PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--LWVQPKVDGVAVTLVYRDGKLN 140 P L+ V H + K ++ ++ + V PK+DG++++LVY G L Sbjct: 70 APAVLHAPVRHARPMLSLEKATQPEQVAAFLDRFPGQPVVVMPKLDGLSLSLVYEGGALL 129 Query: 141 KAISRGNGLKGEDWTQKVSLI-SAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG---- 195 +A++RG+G G+D T V + VP V P ++GE + R Sbjct: 130 RAVTRGDGTTGDDVTPLVRALADGVPTRVPAP-GRVEVRGEAVMLRSTFTAYNEAHPDKP 188 Query: 196 -INARAKVAGLMMRQDDSDTL-NSLGVFVWAW----PDGPQLMSDRLKELATAGFTLTQT 249 IN R AG + +D + L + G + +D + L GFT Sbjct: 189 LINPRNAAAGTLRAKDPATVAGRRLRFLAFELDTDAEAGAGVGADLEEGLRALGFTPADM 248 Query: 250 YTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQP 307 A A + E +A+L + DG V+R A +A+K+ Sbjct: 249 RHAADAEAAQRVITGIETGRADLDYDLDGAVLRLADRRAYAAAGTRSNSPRGALAFKFAA 308 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 + + + + VGK+GK+ VA L PV + V R + + + + GD +LV Sbjct: 309 EEKTTLLVDVVWDVGKTGKVVPVAHLEPVFVGGTTVTRATLANQEVIKARGVMVGDTVLV 368 Query: 368 SLAGQGIPRIDDVV---WRGAERTKPTPP----------ENRFNSLTCYFASDVCQEQFI 414 AG IP + V+ R E + PP + NS + + C Q + Sbjct: 369 RRAGDVIPFVAGVLDAAKRTGEEREIVPPSTCPSCDQPLTEQGNSRELFCTNVSCAAQTV 428 Query: 415 SRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLW 474 RL+ ++ +D IG + EH + LLT EQL + ++ + ++ Sbjct: 429 RRLIHWASRAAADIDAIGPVWIERFAEAGLLEHPSDFYLLTKEQLLEFERVGETSATRMI 488 Query: 475 HQFNLARKQPFTRWVMAMGIPLTRAALNASD----ERSWSQLLFSTEQFWQQLPGTGSGR 530 +R R ++ +P+ S ++ + E+ ++ G Sbjct: 489 ESIAASRAVGLRRALIGFAVPMASEGTATRLCRAGFGSLEEVADAGEERLVEVEDIGPKV 548 Query: 531 ARQVIEWKENAQIKKLGSWLAAQQIT 556 A + E A+++ + L + ++ Sbjct: 549 AASLTE--HLARLRPELTRLRQRGVS 572 >UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C379D5 Length = 685 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 101/562 (17%), Positives = 208/562 (37%), Gaps = 44/562 (7%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR-----CFGSEPRDVMMPPL 87 + L + + + D Y+ G + D YD+L L + ++ GS + V Sbjct: 42 RMKELNELLAKAADSYYNTGVEIMSDHEYDELYDELEKLEKETGVILNGSRTQQVGFEVA 101 Query: 88 NG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISR 145 + V H + K + L+ W+ + K+DG+ + L + +G L +A++R Sbjct: 102 SSLTKVKHTSRMLSLDKTKSIDELTEWLGGHEGF-LSWKLDGLTLVLTFDNGTLTQAVTR 160 Query: 146 GNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM------GGINAR 199 GNG GED T I +P + + ++GE ++ + + N R Sbjct: 161 GNGETGEDITMNARHIIGIPAKIPFE-GHLVVRGESLMKYKDFERVNSLIEDGSKYKNPR 219 Query: 200 AKVAGLMMRQDDSDTL-NSLGVFVWAW--PDGPQLMS--DRLKELATAGF-TLTQTYTRA 253 G + D T ++ F + DG + S +R++ L + GF T+ + Sbjct: 220 NLCVGTVRNLDSKVTAERNINFFAFNLVSADGYESNSFAERIQWLNSLGFQTVYGVKVDS 279 Query: 254 VKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQV 311 A++VA + E F +DG+V+ R +A+K++ Sbjct: 280 SVLAEKVAEFEKDIVNNE--FPSDGLVLMLDDVAYGRSLGETSHAPRNGMAFKWRDETAD 337 Query: 312 AEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAG 371 ++ I+++ ++G ++ VA PV L+ V R ++ +V ++ + GD + + A Sbjct: 338 TTLREIEWSASRTGLLNPVAIFDPVELEGTTVSRASVHNVSIVKQLKLGIGDTLSIYKAN 397 Query: 372 QGIPRIDDVVWRGAERTKPTPPENRFNS----------LTCYFASDVCQEQFISRLVWLG 421 IP++ + A P T + + C + I R Sbjct: 398 MIIPQVLENKTGSASAAIPEVCPICGEKTEIKTSDDDVETLFCTNKECPAKHIGRFEHFV 457 Query: 422 AKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTPGIAKSKSAQLWHQFNL 479 + + + G+ A + + L E++ G + ++ Sbjct: 458 QRDAMNIVGLSTATIETFVSEGFVKKYSDFYHLDRFREKIVTMEGFGERSYQKMQEAVEA 517 Query: 480 ARKQPFTRWVMAMGIPLTRAALNA---SDERSWSQLLFSTEQFWQQLPGTGSGRARQVIE 536 +R +R + A+GIP A + ++ + + T + + G G A ++ Sbjct: 518 SRHTEMSRILYAVGIPNIGRAASRLICAEYPDVNAIEKLTAEELTAIDGIGEVLANDYVK 577 Query: 537 WKENAQI----KKLGSWLAAQQ 554 + N +L + L + Sbjct: 578 FFANEDNLTEYHELLTELDIAE 599 >UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L1C3_9FIRM Length = 692 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 103/563 (18%), Positives = 213/563 (37%), Gaps = 48/563 (8%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR-----CFGSEPRDVMMPPL 87 + L + + Y++EG+ V + YD+ L ++ GS ++V Sbjct: 44 RMKELISFLNEAAKAYYQEGREIVSNLEYDKAYDTLLSLEKESGVVLSGSPSQNVGYAVA 103 Query: 88 NG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISR 145 H + K L +++ + + + K+DG+ + L Y++GKL KA++R Sbjct: 104 TALPKEAHETPMLSLDKTKSVEDLQSFLQGQEGI-LSWKLDGLTIVLHYQEGKLLKAVTR 162 Query: 146 GNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG-------GINA 198 GNG+ GE T+ +P + + ++GE F+ + N Sbjct: 163 GNGIIGELVTENAKTFQNLPLQIPFK-GHLVVRGEAFISYSDFERINEELPEEGAKYKNP 221 Query: 199 RAKVAGLMMRQDDSDTLNSL---GVFVW-------AWPDGPQLMSDRLKELATAGFTLTQ 248 R +G + + D T +F PD + + L GF++ Sbjct: 222 RNLCSGSVRQLDPKVTKERRVQISLFSLVLAEEEGKAPDFHNQHEEEFRFLEKQGFSVVH 281 Query: 249 TYTRAVKNADEVARVRNEWWK--AELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWK 304 R + NA+ + E+ K + F +DG+V+ ES +A+K Sbjct: 282 ---RKMVNAENIQEAVAEFSKLMPKNDFPSDGLVLLYNDIAYGESLGRTAKFPRNAIAFK 338 Query: 305 YQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQ 364 +Q + ++ +++++ ++G I+ VA PV L+ V R ++ ++ ++ + GD+ Sbjct: 339 WQDEEETTKLLSVEWSPSRTGLINPVAIFTPVELEGTVVSRASLHNITYCEDLALGIGDE 398 Query: 365 ILVSLAGQGIPRIDDVVWRGA--ERTKPTPPENRFNSLT-------CYFASDVCQEQFIS 415 I V A IP+I + + E K P + Y + C + I Sbjct: 399 ITVYKANMIIPQIGENKTKSGNLEIPKHCPACQGETKIVKDKETKMLYCTNPHCPAKRIK 458 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTPGIAKSKSAQL 473 + ++ L ++G+ E + L E++ G ++ Sbjct: 459 QFALFVSRDALNIEGLSEMTLEKWLGRGFIQEFPDLFSLEKYREEIIGMEGFGLKSFEKI 518 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQ----LLFSTEQFWQQLPGTGSG 529 A+ R + +GI + ++SQ L+ +T++ Q+ G G Sbjct: 519 QENIEKAKTSNLGRLLYGLGIEGIGVSNGRMLAEAFSQDPYKLMDATKEEILQVKGIGQV 578 Query: 530 RARQVIEWKENAQIKKLGSWLAA 552 A + E+ + + +++ L + Sbjct: 579 LADSIAEYFQKEENRRIVLELLS 601 >UniRef50_B2PUQ1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PUQ1_PROST Length = 570 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 190/536 (35%), Positives = 304/536 (56%), Gaps = 20/536 (3%) Query: 21 VCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC--FGSE 78 C S ++E +L +Q++QW+ Y G S V D YDQL QWQ+C + Sbjct: 40 QCSTLSQDELKKESQKLGEQLQQWNRLYRLSGNSPVTDETYDQLLNTWQQWQKCQNLSGQ 99 Query: 79 PRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGK 138 + +PP + V HP+ HTG++K+ ++ + W+ R ++W+QPKVDGVA++LVY+ GK Sbjct: 100 LPPIHLPPHSRTVKHPIVHTGLKKL-NEVDIGKWIDTREEVWLQPKVDGVAISLVYQQGK 158 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINA 198 L ISRGNG++G +W K I A+P+ + LQGE+F + + H QQ GG+NA Sbjct: 159 LVSMISRGNGIEGLEWRDKADFIPAIPKQLPTSQPQLILQGELFWRLKDHRQQASGGVNA 218 Query: 199 RAKVAGLMMRQDDSDT-LNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNA 257 R +VAG +MR+ T ++ VF+WAWP+G ++ ++LA GF LTQ Y+ V Sbjct: 219 RNQVAGWLMRKSKPVTPEANIDVFIWAWPEGVGKAEEQWRQLANLGFPLTQQYSHKVTTM 278 Query: 258 DEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAI 317 +V + ++ +++ +PF TDG+V+++ P W W VAWK+ ++V + Sbjct: 279 AQVKKWQSYYYQQPMPFATDGIVLKSFPTPRVAAWQVNHNSWSVAWKHPYTRIASKVTDL 338 Query: 318 QFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 F VG++G +SVVA + PV LD KKV R+ +GS++ WQ+ D+ GD I V+LAG GIP++ Sbjct: 339 HFRVGRTGAVSVVAEIEPVELDSKKVSRLYLGSLKSWQKKDLLVGDTIQVALAGHGIPKL 398 Query: 378 DDVVWRGAERTKPTPPE-NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 + V+WR +RT P + +F++L+C+ + C++QF++RL WLG + L + GI EA W Sbjct: 399 ESVIWRLQQRTYPDLSQFKQFHALSCFVMTPQCEQQFVARLNWLG--KQLKIKGISEATW 456 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 R + + + +W L+P + P K+ ++ QF L +QP W+ +GIPL Sbjct: 457 REWAEHYHLNKLTTW--LSPSWQTSLPN--TKKTKKIIEQFRLVGQQPLMNWLKGLGIPL 512 Query: 497 TRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRAR--QVIEWKENAQIKKLGSWL 550 L+ E S LL +T L G G + ++ +W IK++ + Sbjct: 513 KDKHLSLITELS---LLDNT----LFLEGLGLSIIQKTKLNQWLSTPDIKEIFQVI 561 >UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_STRGG Length = 719 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 126/561 (22%), Positives = 226/561 (40%), Gaps = 56/561 (9%) Query: 52 GKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLNGAVMHPVAHTGVRKMVD 105 G+S ++D YD+L+ + ++ S V G V H V + + Sbjct: 42 GESALDDDAYDRLARGIAAYEADHPEEVLADSPTGKVAGGAAVGDVPHTVPMLSLDNVFS 101 Query: 106 KNALSLWM--------RERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQK 157 W R + V+PK+DG+AV YRDG+ + I+RG+G GED + Sbjct: 102 AEQFVTWTASLERRIGRPVTAWSVEPKLDGLAVAARYRDGRFERLITRGDGTAGEDVSHA 161 Query: 158 VSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM--------GGINARAKVAGLMMRQ 209 + +P+ ++ P+ ++GEI + E Q N R AG + + Sbjct: 162 AGAVVGLPERLAEPVT-IEVRGEILMTNEQFAQGNAIRTEHGGAPFANPRNGAAGTLRAK 220 Query: 210 DDSDTLNSLGVFVWA---WPDGPQL--------MSDRLKELATAGFTL---TQTYTRAVK 255 D + + + F + PD +L S+ L +A G T Sbjct: 221 DRAYRVET-TFFAYGALPLPDSGELGEALAELPHSEVLAYVAGLGVHTAAGTAVAPLRAT 279 Query: 256 NADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQV 311 +EV + +A LPF DG+V++A + + W VA+K V ++ Sbjct: 280 TVEEVQARVDGIGALRAALPFGIDGIVIKADLAADQQEAGSGTRAPRWAVAYKLPAVEKI 339 Query: 312 AEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAG 371 + A+++ VG++G I+ A L PV +D V + + D+ GDQ++V AG Sbjct: 340 TRLLAVEWNVGRTGIIAPRAVLEPVEIDGSTVGYATLHNPADITRRDLRLGDQVMVYKAG 399 Query: 372 QGIPRIDDVV--WRGAERTKPTPPENRFNSLTCYFASDV---C----QEQFISRLVWLGA 422 IPRI+ V R + T PE+ + AS+ C + ++ + + Sbjct: 400 DIIPRIEAPVVHLRTGDETPIAFPESCPQCGSEIDASEQRWRCTRGRDCRLVASVSYAAG 459 Query: 423 KQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARK 482 + L ++G+G L L EQL + ++ + L AR Sbjct: 460 RDQLDIEGLGSTRVVQLVDAGLVADFADLFTLRREQLLALDRMGETSTDNLLAAIETART 519 Query: 483 QPFTRWVMAMGIPLTRAALN---ASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKE 539 +P +R A+G+ T +++ A + +++ + + Q++ G G +A V+ E Sbjct: 520 RPLSRVFCALGVRGTGRSMSRRIARHFATMDRIVAADAESLQRVDGIGKEKAAAVVA--E 577 Query: 540 NAQIKKLGSWLAAQQITGFEP 560 ++ L L A ++ EP Sbjct: 578 LVELAPLIGKLVAAGVSMTEP 598 >UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ2_OPITP Length = 708 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 123/611 (20%), Positives = 239/611 (39%), Gaps = 58/611 (9%) Query: 2 KVWMAILIGILCWQSSVWAVCPAWSPARAQ----EEISRLQQQIKQWDDDYWKEGKSEVE 57 ++ + +G++ C A S + A+ + L+ +I + DD Y+++ + E+ Sbjct: 11 RLALGASLGVVALTVIPNLSCAARSVSVAETESLRRLELLRVEIARHDDLYFRKAQPEIS 70 Query: 58 DGVYDQLSARLTQWQRCFG-------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNA 108 D YD L L + + FG + RD+ ++G H + + K ++ Sbjct: 71 DADYDALKQELRELESRFGRRVPRDPAALRDMGDDRVSGFPKARHRMRMLSLEKTTTESG 130 Query: 109 LSLWMRE---------RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVS 159 + + + V+PK DG+A++ Y +G+L + ++RGNG +G+D T Sbjct: 131 VRAFDQALRRLVKPPAEIAYVVEPKFDGLAISATYEEGRLVRLVTRGNGEEGDDVTAAAG 190 Query: 160 LISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQ 209 I +P ++G ++GE+FL + G + R G + Sbjct: 191 RIRTLPPRLAGAAWPRVVEVRGEVFLTFAEFERINRGRRENGRPTFSSPRNLAVGTLKSL 250 Query: 210 DDSDT-LNSLGVFVWAWPD-----GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARV 263 + D + L V + P + L+ +A G + R V + D+ R Sbjct: 251 EPEDREVRQLDVVFFGLGAIDGHAAPASQTQLLEWIAQWGLPSVEDARR-VDSIDDAWRA 309 Query: 264 RNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQF 319 E ++ L F DG V++ W +A+KY P V+ + Sbjct: 310 VQELGGRRSHLAFPIDGAVIKLDDAVGQTAAGVSEVAPRWAIAFKYAPARVGTRVRGVAL 369 Query: 320 AVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDD 379 VG++G I+ VA L PV L ++ R + + + D+ GD + + G+ IP + Sbjct: 370 QVGRTGVITPVAELEPVALAGARITRATLHNASEMERSDLRVGDFVWIERMGEIIPAVVA 429 Query: 380 V--VWRGAERTKPTPPENR----------FNSLTCYFASDVCQEQFISRLVWLGAKQVLG 427 V RG P + + +D C + + ++ + + +G Sbjct: 430 VDTAQRGTVSAPFVFPRDCPGCGALLVRALDDANWRCTNDDCPARQVRKVEHYVSDEGVG 489 Query: 428 LDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTR 487 + G+G A AL ++ R I LT ++ ++ +++A++ +RK P R Sbjct: 490 IRGLGAASVEALVRSQRVREIPDLYTLTAAEVTAHTRLSAAQAARVVDAIQRSRKAPLRR 549 Query: 488 WVMAMGIPLT---RAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIK 544 + +G+P A + Q + E QQ+ G R + + + Sbjct: 550 VIAGLGLPGIGPAGANALGARFADLPQFAAARESDLQQVEGLRPESVRALATALSAERTQ 609 Query: 545 KLGSWLAAQQI 555 +L + LAA + Sbjct: 610 QLLARLAAAGV 620 >UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 Length = 692 Score = 463 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 104/604 (17%), Positives = 222/604 (36%), Gaps = 76/604 (12%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR----------CFGS 77 ++ + +I L+++I++W+ Y++ V+D VYD+ L + +R S Sbjct: 5 SQIRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQS 64 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGVA 129 + V + V H + K L W ++ + +V+PK+DG+A Sbjct: 65 PSQKVGSKITSKFEKVAHSSPMLSLNKAYSNEELEKWAKKAREILKTVTFFVEPKIDGIA 124 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISA--VPQTVSGPLANSTLQGEIFLQREG 187 ++L Y++G L KA++RG+G+ GE+ I+ +P+ ++ L + ++GEI++ Sbjct: 125 LSLFYQNGNLIKALTRGDGVFGENVLVNALKINDEFIPKKINY-LEDLEVRGEIYIDNST 183 Query: 188 HIQQQMG---GINARAKVAGLMMR---QDDSDTLNSLGV------------FVWAWPDGP 229 Q+ N R +G++ R S+ F + + Sbjct: 184 FASLQLETKKFKNPRNAASGILRRYKNHKPKIDAKSIKFLEEESDFRYLKSFFYTLVNPE 243 Query: 230 Q----LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRA 283 + D + L GF + + + + +V + + + L + DGVVV+ Sbjct: 244 KHKINSQFDSINFLRNLGFQVNP-FQKKCSDLKDVFNFISIIKQKRDFLNYNIDGVVVKV 302 Query: 284 AKEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + E +A+K++ ++ AI +G++GK++ A + PV L Sbjct: 303 NEFSIYEKLGSTSKFPHSAIAFKFEDDIAKTKLLAIFATIGRTGKVTYNAKIEPVTLAGS 362 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE------RTKPTPPEN 395 K+ + + + + ++ + AG+ IP+I V + + P Sbjct: 363 KISSAILPNYSYIENLKLNLNTEVYIKKAGEIIPQIIGSVHNYPKTNFSIVKNCPKCNSE 422 Query: 396 RFNS---LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 NS L + + C E + ++V +K L ++ + + + Sbjct: 423 LVNSESGLDQFCQNQFCPEIILQKIVHFCSKNALNIESLAQKRIEKFLEKGLISSACDIF 482 Query: 453 LLT------------PEQLQNTPG----IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 L QL + +L ++ A+ F R + +GI Sbjct: 483 YLKDKLELIYERLSNKNQLLTKQNASQSMQIKSIMKLLNEVERAKNIDFYRLIFGLGIRN 542 Query: 497 TR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 A + + + S+L + G +I++ N + + + L Sbjct: 543 VGLKAAKILSRYASNLSELRNLDFNLLKNQHDFGPVIIESLIDYFNNQKNSEQLNCLETV 602 Query: 554 QITG 557 Sbjct: 603 GFNF 606 >UniRef50_D2U3F9 NAD-dependent DNA ligase LigB n=1 Tax=Arsenophonus nasoniae RepID=D2U3F9_9ENTR Length = 547 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 186/549 (33%), Positives = 290/549 (52%), Gaps = 53/549 (9%) Query: 21 VCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP- 79 CP W EI + ++K+WD+ Y+ G+S V D YDQ+ A W C P Sbjct: 37 QCPDWPKLVLHREIKAINSELKRWDEAYYINGQSLVNDETYDQIFALWKHWSNCLRLPPD 96 Query: 80 -RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGK 138 + + P+ G HPV HTG++K + + ++ W+ R ++W+QPKVDGVA TLVY+ GK Sbjct: 97 KTNTLSLPIKGRKTHPVIHTGLKK-ITADEIARWIAGRHEVWLQPKVDGVAATLVYKKGK 155 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINA 198 L ISRGNG++G DWT K + A+P+T+ LQGE+F + GH Q GG NA Sbjct: 156 LAALISRGNGIEGIDWTPKADFLPAIPKTIPNHATQLILQGELFWYQTGHQQAIAGGANA 215 Query: 199 RAKVAGLMMRQ-DDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNA 257 R KVAG +MR+ +G+F+W+WPDGP M + +L GF LT+ Y+ V + Sbjct: 216 RNKVAGWLMRKNLLVQQEEQIGIFIWSWPDGPSNMQTQFAQLERWGFPLTKRYSHLVTSV 275 Query: 258 DEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAI 317 D++ + + ++ +PF TDG+V++ ++W G W VAWKY +VA+V A+ Sbjct: 276 DQITQWQRYYYNQPMPFATDGIVLKQLPYTLGQYWQAGINNWSVAWKYPTQNRVAQVAAV 335 Query: 318 QFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 +F +G++GKI+ + I PGD I +SL+G GIP+ Sbjct: 336 KFNIGRTGKINPII--------------------------GILPGDAIQISLSGHGIPKF 369 Query: 378 DDVVWRGAERTKPTPPENR-FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 D +VW+ +R + PE + ++ L+C++ S C+ QF++RLVWL + L ++GI E GW Sbjct: 370 DKIVWQIKQRKMLSVPEQKNYHQLSCFYYSMRCESQFVARLVWLA--KQLKMEGINEKGW 427 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 AL + + ++ W LT EQ+ +K ++ QF A+K+PF+ W+ +G+PL Sbjct: 428 LALIRAGKITNLMDWSRLTLEQITEVAMFKANKGKFIYQQFLSAQKRPFSEWLKGLGVPL 487 Query: 497 TRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRA-------RQVIEWKENAQIKKLGSW 549 LFS W L A ++++++ EN +K+L Sbjct: 488 PEK-------------LFSKINCWNDLSSKEINSAILSRKQQKKLVQFIENKDVKQLVKV 534 Query: 550 LAAQQITGF 558 L +I GF Sbjct: 535 LGQHKINGF 543 >UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=DNLJ_MYCS5 Length = 697 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 115/612 (18%), Positives = 226/612 (36%), Gaps = 92/612 (15%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM 84 S + +E+I L +K + Y+ EV+D YD L L + + + S + + Sbjct: 1 MSNQQIKEKIISLNNYLKHLNHLYYDLDAPEVDDKTYDSLYNELLELEAKYPSLVLEDSV 60 Query: 85 PPLNG--------AVMHPVAHTGVRKMVDKNALSLWMR--------ERSDLWVQPKVDGV 128 + G H + K ++ + + E ++PK+DG+ Sbjct: 61 TKIIGAFVSNKFKKTKHNKEMLSLDKAYKESEIFSFYENFTQYKNLENFGFSLEPKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG- 187 ++++ Y +GK KAI+RG+G GED ++ V I VP+ +S L ++GEI++++ Sbjct: 121 SISIHYDNGKFIKAITRGDGTTGEDVSENVFQIRDVPKQISY-LKPLEVRGEIYMKKSTW 179 Query: 188 -----------------------------------HIQQQMGGINARAKVAGLMMRQDDS 212 I+ + NAR AG + ++D Sbjct: 180 KSLNEDIKNQYFQTNIEKIFSYMQALPKSKSWSNLKIKTPIFFKNARNAAAGTLRQKDPK 239 Query: 213 DTL-NSLGVFVWAW----PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW 267 +L + + + L L F + + + + KN E+ NE+ Sbjct: 240 IVKSRNLSSLFYEIVSPLEHNLKTQMEVLAFLKEQNFEVNE-FQKLAKNDQEIMFEINEF 298 Query: 268 --WKAELPFVTDGVVVRAA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGK 323 K F DG V++ + E + +W +A+KY ++ I VG+ Sbjct: 299 SKIKNNFEFDCDGFVIKFNLIDKWEQIGFTSKFPKWAIAYKYMLEEANTKILNIVAQVGR 358 Query: 324 SGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR 383 +G I+ +A PV L++ VQ + + ++ +I GD+I + +G+ IP++ + + Sbjct: 359 TGNITYIAQFMPVELNNTTVQNATLHNYEFIKKNNINIGDEITIIKSGEIIPKVISIYKK 418 Query: 384 GAERTKPTPPENRFNSLTC-------------YFASDVCQEQFISRLVWLGAKQVLGLDG 430 + E N +C + ++ C E+ I L + +K L + Sbjct: 419 NTDSVF----EKVLNCPSCNSLLEIPEGYVDQFCRNENCDEKKIQMLTFFVSKNCLNITN 474 Query: 431 IGEAGWRALHQTHRF--EHIFSWLLLT--PEQLQNTPGIA-----KSKSAQLWHQFNLAR 481 + R + I LL ++++ A K + A+ Sbjct: 475 LSVQNIRIFYNHPVIQMREIQDIFLLKNHVDEIKKIKFFAGKSQENKKINNILQSIEKAK 534 Query: 482 KQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWK 538 + A+GI A L + S L T++ + G + E+ Sbjct: 535 DAYLRNVLAALGIKGIGNIAANLLTNKITKLSDLNNLTDEDLLSIDTFGEKSIENLKEFL 594 Query: 539 ENAQIKKLGSWL 550 + + + L +L Sbjct: 595 SSEKNQDLIKFL 606 >UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 RepID=DNLJ_MYCAP Length = 654 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 108/572 (18%), Positives = 237/572 (41%), Gaps = 49/572 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 A+E I L ++I QW+ +Y++ K V D YD+ L + ++ S Sbjct: 1 MQKEEAKELIKSLVEKINQWNYEYYQLNKPSVSDLEYDKALLELEKLEKEHPDLILSNSP 60 Query: 79 PRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMR--------ERSDLWVQPKVDGV 128 + ++ + K + + ++ ++ E + ++PK+DG+ Sbjct: 61 TFRIGSFASEKFTKFVYQKPMLSLAKAYNYDDINSFINNISKIVPTENINFNIEPKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 ++ L Y+ GKL KA +RG+G +GED T+ + I ++P+ ++ + ++GE+F+ + Sbjct: 121 SIALRYKQGKLVKAATRGDGSEGEDVTENIYQIKSIPKLINY-FNDLEVRGEVFITKNDF 179 Query: 189 --IQQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLKELAT 241 I + NAR +G + + D + +L F++ + G + L+ + Sbjct: 180 KKINESNNFANARNAASGTLRQLDANIVAERNLSAFLYEIVEPEKHGIYYQHEALEFMKN 239 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEW 299 F E + K +L + DG+V++ + + Sbjct: 240 LDFPTNPFSKVVEIEELEESISDFAEIKNKLDYDADGLVIKLNDLQMWDKLGKTSKFPKH 299 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +A+KY + + I +VG++GKI+ +A++ PV+L+ V+ + + ++ +I Sbjct: 300 SIAFKYDVEVASSRITDILTSVGRTGKITYIANILPVLLNQTTVKAATLHNHNFIKDMNI 359 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-------------YFAS 406 D++ + AG+ IP++ + E+ + N +C + + Sbjct: 360 NINDEVNIIKAGEIIPKVISL---KEEKNYVDYYKKATNCPSCGSQLVEFEGIVDQFCTN 416 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTPG 464 D C ++ I+ + ++ L + G+G + + + ++I L +L P Sbjct: 417 DECPDKNINNIYHFASRNCLNIVGLGLSTVKDFY-PKFIKNIKDIFDLHKYRAELIKLPR 475 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS-TEQFW 520 K + + A+ + F++ + A+GI A L A + ++++LL Sbjct: 476 YRDLKVDNILNSIESAKNKKFSKVIFALGIKHIGQRAAKLIADNYANFAELLDDHNLLKL 535 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 Q G +IE+ + + L ++L A Sbjct: 536 QNTKNIGPKIIESLIEFISSPANQDLLAFLDA 567 >UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNLJ_TROWT Length = 628 Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 115/610 (18%), Positives = 216/610 (35%), Gaps = 97/610 (15%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA- 90 I L QI Y++E S + D YD L L + G R+ + A Sbjct: 10 RRIELLTAQIIAARKAYYQENTSLMSDVEYDALEHELKDAEHAKGFSDRNSPSLTVGIAA 69 Query: 91 -------VMHPVAHTGVRKMVDKNALSLWMRERS---------DLWVQPKVDGVAVTLVY 134 V H + + + L W + + K+DGV V+L Y Sbjct: 70 QLNLFEPVKHIEPMLSLDNVFSLDQLHSWYEKTKKICPEGDQCTFVCELKIDGVGVSLRY 129 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH------ 188 +G L A +RG+G GED TQ + + ++P ++ P ++GE F++R+ Sbjct: 130 ANGYLISAATRGDGAIGEDITQNMLYVPSIPPRIALP-GIFEIRGEAFIKRDEFDRINQL 188 Query: 189 -IQQQMGGINARAKVAGLMMRQDDS-DTLNSLGVFVWAW-------PDGPQLMSD----- 234 +++ N R V+G + + + L S+ + + G L SD Sbjct: 189 SLERSKQFANPRNFVSGCIRTKTPNMRYLESISFYAHGFTQVYGYTSGGMNLHSDITASG 248 Query: 235 ------------RLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVV 280 L+ + +Y R N E+ + +P+ DG+V Sbjct: 249 GVKTEIEHGMFSAYSRLSECKIPVN-SYNRLCTNFSEIESYIENIRLNRQCVPYAIDGIV 307 Query: 281 VRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVML 338 V+ + W VA+K+ + V + I+ +VG++G+++ A L P+ L Sbjct: 308 VKIDSLQKQALLGSTTKAPRWAVAYKFPSESTVTRLLDIEVSVGRTGRVTPYAVLQPIQL 367 Query: 339 DDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP-------- 390 D +V R + + + + D+ GD + + AG +P + + + ++ Sbjct: 368 DGSEVSRATLHNQKVIGDKDLLIGDYVRIRKAGDIVPEVLCALPEKRDGSEVLFKMPSLC 427 Query: 391 -------TPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH 443 P + L C C Q RL ++G++ VL + + E AL Sbjct: 428 PSCGAELMPSKLGDIDLRCPNM-QSCLVQLAGRLEYIGSRGVLDIAYLAEENAYALSHLR 486 Query: 444 RFEHIFS--WLLLTPEQLQNT-------------------PGIAK--SKSAQLWHQFNLA 480 +F +T + L PG + + + A Sbjct: 487 KFGKSAEVQLFKITIDDLVALEFMYKGNMRSPFRKKGDSFPGFEEPTKSAQDMVDSIERA 546 Query: 481 RKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 ++ P ++++A+ I A A S ++ + ++ G A V +W Sbjct: 547 KRSPLWKFLLALNIRHIGPASAKALADHFGSIESIINAKIDELLKVRSLGETIAISVHDW 606 Query: 538 KENAQIKKLG 547 + +L Sbjct: 607 FRDPWRVELV 616 >UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G8_9ZZZZ Length = 707 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 112/596 (18%), Positives = 223/596 (37%), Gaps = 84/596 (14%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNG--A 90 E RL +I++ + Y+ + E+ D +D L RL + + V P G Sbjct: 10 EADRLASEIQRHSELYYNYAEPEITDAQFDLLIQRLREIDPS-NPQLEKVGADPAPGSVK 68 Query: 91 VMHPVAHTGVRKMVDKNALSLWMR----ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRG 146 V H + K ++ ++ VQPK+DG A++L YR G L +A++RG Sbjct: 69 VEHIYPMLSLDKANTPQEIAHFVNITSAATQRFVVQPKLDGSAISLEYRRGMLVRAVTRG 128 Query: 147 NGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG-GINARAKVAGL 205 +G +GED T+ V I +P + N ++GE+ + + + + N R AG Sbjct: 129 SGTRGEDVTRNVRRIPNIPNRIKWR-GNCFVRGEVVMLLDTYRENYAEVAPNPRNLAAGA 187 Query: 206 MMRQDD---SDTLNSLGVFVWA--WPDGPQ-----------LMSDRLKELATAGFTLTQT 249 + +++ L F + +P+G S L+ L T Sbjct: 188 LRQKNPESGKARAEDLRFFAYDVKFPEGASGEESKAPLNYIHDSQILEWLFTMDIQPAGR 247 Query: 250 YTRAVKNADEVARV----RNEWW--KAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLV 301 + ++DEV + E + E+P+ DG+V++ + + W + Sbjct: 248 FVVEADDSDEVIELLISKTEEAIGSREEMPWEIDGLVIKVDELTKRPLLGETAHHPRWAL 307 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 AWK+ P V ++ + G++G ++ VA +APVM+ V+ + + + + Sbjct: 308 AWKFPPEEATTVVMSVDWQTGRTGNVTPVARVAPVMVSGVTVENTTLHNPGEVERLGLKI 367 Query: 362 GDQILVSLAGQGIPRIDDVVWRG--------------------AERTKPTPPENRFNSLT 401 GD++++ G IP+I V+ + ER PP T Sbjct: 368 GDRVMIVRRGDVIPKITKVIGQATGTDLEGRRHSDGTPFHEALPERIDVEPPSVCPRCGT 427 Query: 402 --------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + C + + +++ + L +DG+GE L ++ + Sbjct: 428 NLHSEGAFLKCRNSGCPSRVVRSILYWC--KSLEIDGVGEKLANQLVESGLAPELADLYR 485 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWS 510 L+ + + + + + ++ Q RK ++ ++G+P A++ + + ++ Sbjct: 486 LSHADVLSLERMGEKSARRVIDQIQSKRKMSLDHFIASLGLPRIGPEIASMISKEIKTIE 545 Query: 511 QLLF------STEQF-------WQQLPGTGSGRAR-----QVIEWKENAQIKKLGS 548 S + + G G AR W + + L Sbjct: 546 NFRNLVNTWSSGREETTDILPRLVAIDGIGEIVARLFLDGSKSNWSQIEDLSSLLE 601 >UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE Length = 657 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 110/572 (19%), Positives = 226/572 (39%), Gaps = 49/572 (8%) Query: 30 AQEEISRLQQQIK---QWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRD 81 ++I ++ +I+ + Y++E + + YD+L L + ++ G S Sbjct: 1 MADKIQLMKDKIEILDRAAKAYYQENTEIMSNIEYDKLYDELLELEKETGVVLSNSPSIH 60 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKL 139 V L+ H + K D L W+ + + + K+DG+ + L Y+DG L Sbjct: 61 VGYELLSNLPKERHEKPMLSLDKTKDVGTLKEWLGTQKGI-LSWKLDGLTIVLTYQDGHL 119 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG----- 194 KA++RG G +GE T + +P T++ L+GE ++ I+ Sbjct: 120 VKAVTRGTGEEGEVITNNARVFRNLPVTIAYK-GTLILRGEAIIRYSDFIKINNEIADVG 178 Query: 195 --GINARAKVAGLMMRQDDSDTLNSLGVFVWAW----PDGPQLMSDR---LKELATAGFT 245 N R +G + RQ ++ + V+ + + D +L + R + L GF Sbjct: 179 VKYKNPRNLCSGSV-RQLNNKVTSERNVYFFGFSLVKADNVELDNSRASQMNWLKNQGFD 237 Query: 246 LTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAW 303 + N +E + ++ +A F +DG+V+ ES +A+ Sbjct: 238 IVDFKEVTSSNIEETVQWFSQNIEAN-DFPSDGLVLTFEDIAYGESLGSTAKFPRDSIAF 296 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 K++ + + I+++ ++G I+ +A PV L+ V R +I ++ + ++ GD Sbjct: 297 KWRDEIKETTLLNIEWSPSRTGLINPIAIFEPVELEGTTVSRASIHNISIMEGLELGIGD 356 Query: 364 QILVSLAGQGIPRIDDVVWRGAERTKP-TPPENRFNSL--------TCYFASDVCQEQFI 414 I V A IP+I + + R P P + + T Y ++ C + I Sbjct: 357 TIGVYKANMIIPQISENLTRSGMAPIPEECPVCKGKTEIKQENGVKTLYCVNNECLAKQI 416 Query: 415 SRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQ 472 + + ++G+ EA L + + + ++ G+ + + Sbjct: 417 KSFTHFVGRDAMNMEGLSEATLEKLIAKGLIKELADLFHIEKYKNEILELEGLGEKSFNK 476 Query: 473 LWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERS-WSQLLFSTEQFWQQLPGTGS 528 L N ARK R + ++GIP A L + W+++ + Q+ G G Sbjct: 477 LITSINKARKTTAVRLLYSLGIPNVGLSNAKLICRYFKYDWNKIENAEFSELIQIGGIGD 536 Query: 529 GRARQVIEWKENAQ----IKKLGSWLAAQQIT 556 A I + + + ++ + + L +++ Sbjct: 537 IMAESFIRFFSDEKKKVIVQDVLNELELEEVQ 568 >UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWP3_9BACE Length = 656 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 116/552 (21%), Positives = 213/552 (38%), Gaps = 40/552 (7%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMMPP 86 E + L Q IK+ D+ Y+K + D YD+L L +R G S + V Sbjct: 5 ERMRELIQTIKEADEAYYKYDAPIMADLDYDRLYDELAALERETGTILSSSPTQRVSGEV 64 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 L AV H K + ++ + + K+DG+ + L Y +GKL +AI+ Sbjct: 65 LESLTAVRHSRPMLSADKCKSVADIHKYLGGH-EAVLSWKLDGLTLVLRYENGKLVQAIT 123 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ----MGGINARA 200 RG+GL+GED T V ++ VP + ++GE + + + R Sbjct: 124 RGDGLQGEDVTHTVRIMKNVPLVIPCK-EPLEVRGEGVISWKEFHALNGTLDEPYAHPRN 182 Query: 201 KVAGLMMRQDDSDTLNSLGVFVWAWPD-----GPQLMSDRLKELATAGFTLTQTYTRAVK 255 AG + R+ +++ + G+ A+ G + L+ LA GFT A Sbjct: 183 LAAGSV-RKLNAEEVRERGLSFMAFDLISDNLGGSTKWETLRFLAQMGFTTVGYSILAAG 241 Query: 256 NADEVARVRNEWWK-AELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVA 312 ++E R ++++ E + TDG++ R + A+K+ Sbjct: 242 ASEEAVRQAMDFYQPKEYAYPTDGLIFEFNDLAYGRSLGATGHHENRMTAFKWPDTRYET 301 Query: 313 EVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQ 372 + + ++ A ++G IS+ A+ V++D V + ++ + + PGD I V A Sbjct: 302 KFRRLEVATTRTGMISLTAAFDDVVIDGTTVNHAYLHNLDNFTRLALGPGDTISVYKANM 361 Query: 373 GIPRIDDVVWRGAERTKPTPPENRFNSLTC----------YFASDVCQEQFISRLVWLGA 422 IP+I + + P ++L Y ++ C + + + V + Sbjct: 362 IIPQIAENKTKSGGCPLPDVCPCCGSTLVVRQSSGGTRQLYCENEACPARLVRKFVHFCS 421 Query: 423 KQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTPGIAKSKSAQLWHQFNLA 480 K + + G+ E Q ++ L E++ TPG + A+L + + Sbjct: 422 KTRMEIKGLDEQTLTTFVQHGWVKNYGDLYELERHKEEILKTPGFGEKSFARLQNAVDER 481 Query: 481 RKQPFTRWVMAMGIP----LTRAALNASDERSWSQLLFSTEQF--WQQLPGTGSGRARQV 534 R +++ A+GIP LN SW + + QL G + Sbjct: 482 RTCTLNQFIAALGIPEVGRHAGRILNRKFGGSWDAFERAILDQFDFTQLEDFGQVMNDNI 541 Query: 535 IEWKENAQIKKL 546 W + + KL Sbjct: 542 YCWYSDEEEAKL 553 >UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XH23_9ENTR Length = 564 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 189/556 (33%), Positives = 300/556 (53%), Gaps = 19/556 (3%) Query: 6 AILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLS 65 A+ I +C E RL +Q+++WD Y EG SEV D VYDQ+ Sbjct: 22 AVSIAYGTEFVDSQKICHTLDDKLMGAEQLRLGEQLQEWDRQYQIEGVSEVSDEVYDQIL 81 Query: 66 ARLTQWQRCFGSEPR--DVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQP 123 A+ + QRC R + P V HP+ HTG++K+ + ++ W+ R ++W+QP Sbjct: 82 AQWRRGQRCLNLPDRLPQPVQPNTERLVKHPIPHTGLKKL-EFKEIAPWLESRHEVWLQP 140 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 KVDGVAVTL Y +G L ISRG+G KG +W +K I +P+T+S + LQGE+F Sbjct: 141 KVDGVAVTLHYENGHLVSMISRGDGSKGLNWREKADFIQGIPKTISIK-QSIVLQGELFW 199 Query: 184 QREGHIQQQMGGINARAKVAGLMMRQD-DSDTLNSLGVFVWAWPDGPQLMSDRLKELATA 242 + H+Q+ GG NAR+KVAG +MR+D + + +GVF+W+WPD MS +L ELA Sbjct: 200 KLNEHVQKIDGGQNARSKVAGWLMRKDMPAQVTDDIGVFIWSWPDNSTPMSQQLSELAML 259 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVA 302 GF L Q Y+ + + +A+ R+ ++ +PF TDGVV+++ P S W Q W +A Sbjct: 260 GFDLAQRYSHPIVESQSIAQWRDHYYSISMPFATDGVVLKSFPTPSSSAWRANQNSWSIA 319 Query: 303 WKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPG 362 WKY + V++V + F VG+SG ++V+A++ PV +DDKKV ++ +GS+ W++ D+ G Sbjct: 320 WKYPLKSIVSDVVDLTFRVGRSGVVNVIANIEPVRIDDKKVSKIRLGSLNSWKQKDVLVG 379 Query: 363 DQILVSLAGQGIPRIDDVVWRGAERTK-PTPPENRFNSLTCYFASDVCQEQFISRLVWLG 421 D+I ++L+G G P ++ V+WR R T P F++L+C S C QF++RL WLG Sbjct: 380 DKIQLTLSGHGAPLMEKVIWRQKPRQYLNTLPLENFHALSCLSYSTDCASQFVARLTWLG 439 Query: 422 AKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLAR 481 + L + G+GE W + + + W L+P+ P ++ A Q A+ Sbjct: 440 --KQLNIRGVGEKTWMVWVEKYGLSELLGW--LSPDWQNRLPKTQQT--ANALEQLQQAQ 493 Query: 482 KQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTE-QFWQQLPGTGSGRARQVIEWKEN 540 Q W+ +GIPL L + + +E + +++ R + + +W Sbjct: 494 HQLTANWLKGLGIPLKSEQL-----EKIAAITTLSEPEQIEKMA-VSETRKQALQQWLAA 547 Query: 541 AQIKKLGSWLAAQQIT 556 +IK+ L I+ Sbjct: 548 PEIKQALQTLQNLGIS 563 >UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostridium difficile QCD-76w55 RepID=UPI00016C60E9 Length = 663 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 110/581 (18%), Positives = 240/581 (41%), Gaps = 54/581 (9%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 + +E+I L++++ + D Y +G + D YD+L +L + + S + + Sbjct: 3 KVEEKIRDLREEVIKHDLAY-AKGDPIISDTEYDKLYLKLVGLEELYPEYSDENSPTKRI 61 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-RSDLWVQPKVDGVAVTLVYRDGKL 139 + + G V H + +K+ + L ++R+ +L V+ K+DG+ V Y +G L Sbjct: 62 IDIKVEGLKKVEHTIPMLSQKKINTPDELDKFIRQMNDELLVEDKLDGLTVIAKYNNGVL 121 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH------IQQQM 193 + I+RG+G G+D T V +P+T+ ++ E + E ++++ Sbjct: 122 YEGITRGDGKIGDDITHIVLNTPNIPKTIPFN-DYLEIRLEGIIPNEDFEMVNSILEEED 180 Query: 194 GGINARAKVAGLMMRQDDSDTLNSLGVFVWAWP------DGPQLMSDRLKELATAGFTLT 247 ++R +G + R + G+ + A+ + +RL+ L T GF + Sbjct: 181 KYKSSRNLASGTV-RSLNGCVAKERGLKLIAFELVKADNIIFEKDYERLEFLKTLGFDVV 239 Query: 248 QTYTRAVKNADEVARV------RNEWWKAELPFVTDGVVVRAA--KEPESRHWLPGQAEW 299 YT KN +++ ++ N+ + L + DG+V++A + +S +W Sbjct: 240 N-YTLFKKNEEDILKLKDYIFSYNQEVRPFLSYKVDGLVIKANSLELRDSLGNTSKYPKW 298 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 A+K++ + ++K VGKSG+++ VA PV +D + + + + + ++ DI Sbjct: 299 SSAFKFENEEAITKLKDCIIEVGKSGQLTPVALFEPVQIDGITISKATLSNFKNVKDKDI 358 Query: 360 APGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS--------LTCYFASDVC 409 GD ++V+ A IP+I+ + R E + P+ + + +D C Sbjct: 359 KIGDMVVVARANDVIPKIEHSIKEDRTGEEKEIEIPKFCPVCNEPIVKENVHYFCVNDDC 418 Query: 410 QEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL--LTPEQLQNTPGIAK 467 Q +++ +K+ L +DG+GE + I + L A Sbjct: 419 PAQIEGKIIHFVSKKSLDIDGLGEESIKLFLDNGLISSIIDIFYLKDKKDDLLKLDKYAD 478 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF----- 519 K + L +++ ++ + + I L + A+ S +L ++ Sbjct: 479 KKVSNLLENIEASKQASLSKILHGLSIKLIGGRASKELANKFISMKNILNISKNEEEFKQ 538 Query: 520 -WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + G + ++ + ++ + +L + L E Sbjct: 539 SILSINNFGEEMSNNLVLFFKDERNIELINKLMEVGFKMEE 579 >UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C9H9_MICLC Length = 797 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 115/483 (23%), Positives = 186/483 (38%), Gaps = 67/483 (13%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 A +EE L ++++ Y++ E+ D YD L RL + S Sbjct: 15 DIPAADLREEYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALHPELVSNDS 74 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER------------SDLWVQP 123 ++V V H + + L +W R V+ Sbjct: 75 PTQEVGGEVSEAFAPVRHGARMYSLEDVFSVEELEVWFRRAAQALTQVRPGVAPRWLVEV 134 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEI 181 K+DG+AV L YRDG+L +A +RG+G+ GED T V I +P +SG A ++GE+ Sbjct: 135 KIDGLAVALRYRDGRLVQAATRGDGVTGEDVTANVRTIGDIPHELSGEGWPAEFEVRGEV 194 Query: 182 FLQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----G 228 F+ + N R AG + ++D + T L +FV G Sbjct: 195 FMSSAAFAELNARRAEEGQPPFANPRNAAAGALRQKDPAVTAQRPLAMFVHGIGSVEAFG 254 Query: 229 PQLMSDRLKELATAGFTLTQTYTRAVKNADE-----VARVRNEW--WKAELPFVTDGVVV 281 + + LA+ G ++ YTR V+ ADE V V E+ + EL DG+V+ Sbjct: 255 LESQHEAYDALASWGLPVSP-YTRRVEGADEEALAAVVAVIEEYGRRRHELIHEIDGIVL 313 Query: 282 RAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 +A + R W A+KY P ++ I +VG++G+++ A L PV + Sbjct: 314 KADAFADQRYLGHTSRVPRWAAAYKYPPEEVHTLLRDIAVSVGRTGRVTPFAVLEPVTVA 373 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER------------ 387 V + + + + GD ++V AG IP + V E+ Sbjct: 374 GSTVSLATLHNQDVVKAKGVLIGDTVVVRKAGDVIPEVVGPVLPLREKAIEAGRELREFV 433 Query: 388 ---------TKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRA 438 T P + L C A C Q R+ L ++ ++ +GE R Sbjct: 434 MPAHCPSCGTPLAPAKEGDVDLRCPNA-RSCPAQLAGRVEHLASRGAFDVEALGEEAARW 492 Query: 439 LHQ 441 L Q Sbjct: 493 LVQ 495 Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 7/95 (7%) Query: 472 QLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE----QFWQQLP 524 +L+ + A+ QP R ++A+ I A A+ S + L + E ++ Sbjct: 596 RLFDELEKAKSQPLWRTLVALSIRHVGPTAARSLATAFGSMTALRAAAEAGDRDRLAEID 655 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 G G A +IEW +++ A + + Sbjct: 656 GVGPIIADALIEWFAEDWHREIVDRWTAAGVAMED 690 >UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli RepID=DNLJ_LEIXX Length = 747 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 120/650 (18%), Positives = 218/650 (33%), Gaps = 118/650 (18%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVMMP 85 A A+ E L +I + D Y++ V D YD++ RL + +R + +D Sbjct: 2 AADARAEAQGLTTRILELRDAYYELDTVLVSDEEYDRMLRRLEELERLHPELQSQDSPTQ 61 Query: 86 PLNGA--------VMHPVAHTGVRKMVDKNALSLWMR-------ERSDLWVQPKVDGVAV 130 + G V H + + A W R D + K+DG+A+ Sbjct: 62 TVGGRAQTTLFAPVEHAERMLSLDNVFSFEAFEAWAAKIERDAGRRVDYLCELKIDGLAI 121 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP---LANSTLQGEIFLQREG 187 L Y +G L A +RG+G+ GED T+ + I A+ Q +SG ++GE+F Sbjct: 122 NLRYENGVLVTAATRGDGVVGEDVTENIRHIPAITQRLSGAGPFPPVVEVRGEVFFPVAK 181 Query: 188 HIQQQMG--------GINARAKVAGLMMRQDDSDTLNSLGVF-------------VWAWP 226 + NAR +G + ++ + + + AWP Sbjct: 182 FEELNANQQAAGERVFANARNAASGSLRQKAEGKNPAQRRLMRDRLGRLRMLVHGIGAWP 241 Query: 227 DGP-QLMSDRLKELATAGFTLTQTYTRAVKNADEVARV--RNEWWKAELPFVTDGVVVRA 283 + P S + L + G + + R E A R+ + + DGVV++ Sbjct: 242 NPPVATQSGVYELLRSWGLPTS-AHGRVFGTVQEAADFIGRSAERRDTVEHEIDGVVIKV 300 Query: 284 AKE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + + W +A+KY P ++ I +VG++G+ + A + V + Sbjct: 301 DELVLHDELGATSRAPRWAIAYKYPPEQVNTKLLDIVVSVGRTGRATPFAVMEKVKVAGS 360 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS 399 +V++ + + + + GD +++ AG IP + V R + P + Sbjct: 361 EVRQATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELRDGTEREFAMPTDCPEC 420 Query: 400 -------------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHR-- 444 L C A + C Q R+ +G++ L ++ +GE AL Q Sbjct: 421 GTPLAPAKEGDIDLRCPNA-EFCPAQVRGRVEHIGSRGGLDIEALGEVAAAALTQPRFPE 479 Query: 445 ---FEHIFSWLLLTPEQL-----------QNTPGIAK----------------------- 467 L E L P + + Sbjct: 480 RAPLPTEAGLFGLRLEDLFPIEVVVRDSETGLPKLTETGVEKVDAPFRRRRQKKDGAFDP 539 Query: 468 --------------SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWS 510 + +L AR +P R ++++ I A A S Sbjct: 540 EAEAFDGDEIAVPSKSAIELLANLRAARTKPLWRILVSLNIRHVGPVAARALADHFGSLD 599 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + ++ + G G A V+ W E ++ A + P Sbjct: 600 AIRAASRDELAAVDGVGGIVADAVLSWFEIGWHCEIVENWARDGVQFAIP 649 >UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation domain protein n=1 Tax=uncultured marine microorganism HF4000_001N02 RepID=B3T074_9ZZZZ Length = 727 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 118/616 (19%), Positives = 212/616 (34%), Gaps = 102/616 (16%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNG--A 90 I L Q + D Y+ E + D YD L L + R V P G Sbjct: 14 RIEELAQLLAHHSDLYYNEAAPVITDAEYDLLFDELKRLDPTHPQLDR-VGSDPAPGSVK 72 Query: 91 VMHPVAHTGVRKMVDKNALSLWMRERS----DLWVQPKVDGVAVTLVYRDGKLNKAISRG 146 V H + K + +S ++ + + QPK+DG A++L YR G+L +A +RG Sbjct: 73 VEHLFPMQSLDKASEVAEISHFVAQTTAHGRRFVCQPKLDGSALSLEYRRGRLVRAATRG 132 Query: 147 NGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI-NARAKVAGL 205 NG +GED T I +P+++ G + ++GE+ + E + N R AG Sbjct: 133 NGERGEDVTANARRIPNIPESL-GWDGDCHIRGEVVMPLETFRSKYASFAPNPRNLAAGS 191 Query: 206 MMRQ---DDSDTLNSLGVFVWAW---------PDGP-----QLMSDRLKELATAGFTLTQ 248 + ++ L + PD P S + L G Sbjct: 192 LRQKHVKAGKGDAADLSFHAYGVMFPGLDHKHPDSPAPPDFNHDSQAIDWLTQNGIAAAG 251 Query: 249 TYTRAVKNADE--------------VARVRNEWWKAE--LPFVTDGVVVRAAKEP--ESR 290 DE + +V W + + DGVV++ + E Sbjct: 252 NEV-VEAGVDEGIEEAEADEAVAEALLQVTENWARKRDTADWELDGVVIKLDEFRKRELL 310 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 W +AWK+ P + + + G++G ++ VA +APV + V+ + + Sbjct: 311 GKTAHHPRWALAWKFPPEEATTVLLGVDWQTGRTGTVTPVARVAPVRVSGVTVENTTLHN 370 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR-------------GAERTKPTPPENRF 397 + I+ GD++ ++ G IP+I +V+ G P P Sbjct: 371 AGEIERLGISVGDRVRITRRGDVIPKIVEVLGEATSADLDNRFHADGTPFADPLPLRRGV 430 Query: 398 ----NSLTC-----------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 N C + C + +++ + L +DGIGE L + Sbjct: 431 KIPANCPRCRSGLQEDGAFIRCFNLECPSRLERSILYWC--RALEMDGIGEKLAEQLCEA 488 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARK-----------QPFTRWVMA 491 + + L+ + L+ +A+ +A + Q + ++ P Sbjct: 489 GLVKTLPDLYRLSGKDLEGLERMAEKSAANVIAQLDDSKTLDLAAFLAALGLP------- 541 Query: 492 MGIPLTRAALNASDERS----WSQLLF--STEQFWQQLPGTGSGRARQVIEWKENAQ--I 543 GI A A + S + L + + ++ G G A + E + + Sbjct: 542 -GIGPELAGGFAQEIGSSTAMFELLADSEAAVERLIRIEGVGETVAGSFLSGLEMRREMV 600 Query: 544 KKLGSWLAAQQITGFE 559 + L L + E Sbjct: 601 EDLVDVLTITDVEAVE 616 >UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNLJ_MYCPU Length = 679 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 112/586 (19%), Positives = 221/586 (37%), Gaps = 66/586 (11%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPV 95 L +++K ++ Y+ + +S V D YD L + F E V + +V+ V Sbjct: 14 ELNEKLKLYNHHYYNKNESLVSDEYYDAKLLELENIRDNFPEEYNQVFQKDFSKSVLEKV 73 Query: 96 A-----------------HTGVRKMVDKNALSL-------WMRERSDLWVQPKVDGVAVT 131 + K L ++ +Q K+DGV+++ Sbjct: 74 NHLDEQDVKLKKEKHQKLMLSLNKAYSFEDLERYTNRINTFVGNNHQYILQEKIDGVSIS 133 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQ------- 184 L Y +G L KA++RG+G+ GE+ T I +P+T++ N L+GEIF Sbjct: 134 LYYENGILTKALTRGDGIYGENVTHNALNIKDIPKTINIK-ENIELRGEIFFSLKLFESL 192 Query: 185 REGHIQQQMGGIN-----ARAKVAGLMMRQDDSDTLNSLGVFVWAWPD----GPQLMSDR 235 + + +Q G N R K +G++ +D + L F++ + Sbjct: 193 KNEFLDKQDGTKNKKWNTPRNKASGILKSLKTTDESSWLSCFIYEVVSPENFNLKTQKQL 252 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEP--ESRHWL 293 L GF L + +N E ++ + + DG+V++ + Sbjct: 253 FDFLKIQGFNLPKFEFIENENLIENFITNFKFEDDQRDYEIDGLVIKLNDLSLYDLLGKT 312 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 +A+K++ + +++ I VG++G I+ A L V+L+ K++ + + Sbjct: 313 SKFFHHSIAYKFRKKFVMTKIEDIFVTVGRTGLITYNAKLQEVVLNGSKIKAATLHNYEY 372 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS----------LTCY 403 + I GD++ + AG+ IPR+ +V ++ +P E + L + Sbjct: 373 IKNIKINIGDKVYIEKAGEIIPRVVKLVSPKNDQNYFSPIEFCPSCKNKLSWSENMLNQF 432 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQN 461 + C E+ I +L + +K + + +G + I L + L Sbjct: 433 CLNPDCIEKKIQKLKYFVSKDGMEIQELGGKKIELFFAKGWVKKIEDIYNLKNNYDDLLK 492 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNAS--------DERSWSQLL 513 + L H+ ++ + + A+GI L S D+++ LL Sbjct: 493 LENFQEHSVNVLLHKIEESKDVYTWKLIAALGIKNIGKKLAKSLVKIIFENDQKNLLSLL 552 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 ++ GS + + E+ N + + L +L GFE Sbjct: 553 EFNYDELEKYDEFGSVKIESLKEFFANDENRNLIQFLDQ---NGFE 595 >UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4V767_9ACTO Length = 696 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 140/618 (22%), Positives = 240/618 (38%), Gaps = 80/618 (12%) Query: 5 MAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQL 64 M L S+ PA R++ E + L+ ++++ Y+ +G S ++D YD+L Sbjct: 1 MTTLTAAQALSSTSGTSGPAALTGRSEYE-AALR-RLREASQAYYGDGDSVMDDASYDRL 58 Query: 65 SARLTQWQRCFGSE--PRDVMMPPLNGA-----VMHPVAHTGVRKMVDKNALSLWMRERS 117 L W+ +E P +GA V H + + D L W Sbjct: 59 RLALLAWETEHPAEVAPGSPTTLVADGAAPAGDVAHTTRLLSLDNVFDAEGLVAWGASVE 118 Query: 118 ---------DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV 168 V+PK+DG AV YR G+L + ++RG+G +GED + + I +P+ + Sbjct: 119 RRLGRAPAGGFTVEPKIDGAAVAARYRGGRLVRIVTRGDGSQGEDISHVIGQIDGLPELL 178 Query: 169 SGPLANSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNSLGV 220 +G A ++GE+ +E N R AG + +D L + Sbjct: 179 AGE-ATVEVRGEVAFTQEQFEVANAVRVAHGAPVFANPRNGTAGTLRAKDRP---YRLRM 234 Query: 221 FVWAWP----DGPQLMSD----------------RLKELATAGFTLTQTYTRAVKNADEV 260 WA+ +G + R A AG + A + D + Sbjct: 235 TFWAYGAVELEGVPFLPAGATQAEALAAVAAAGVRTTAAAGAGLHIVDDLAGAQQAVDAM 294 Query: 261 ARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQ--AEWLVAWKYQPVAQVAEVKAIQ 318 A +AELP DGVV++ E G W +A K V + ++ + Sbjct: 295 AA-----MRAELPVGIDGVVIKLNDTAEQEAIGSGTRFPYWAIAVKLPAVERQTVLEDVV 349 Query: 319 FAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI- 377 + VG++G ++ A LAPV +D V R + + + D+ GD + V AG IPR+ Sbjct: 350 WEVGRTGVLAPTAVLAPVEIDGSTVTRATLHNPADIRRRDLHIGDTVTVYKAGDIIPRVQ 409 Query: 378 DDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISR------------LVWLGAKQV 425 V KP P C + Q R + + +++ Sbjct: 410 AAVALLRPAGAKPVPLPE--TCPRCGGEINT--AQERWRCAKGTSCALPALIEYAAGREM 465 Query: 426 LGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPF 485 L +DG+G+ AL + + LT EQL G + ++A+L Q A+ +P Sbjct: 466 LDIDGLGKTYVAALVDSGDVTDVADLFTLTLEQLTAASG-SSRRAAKLAEQIEAAKARPL 524 Query: 486 TRWVMAMGIPLTRAALN---ASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 +R A+G+ T +++ A + + + Q + G G +A ++E + A Sbjct: 525 SRVFCALGVLGTGRSMSRRIARHFVTMEAIRRADAAEMQDVEGIGPEKAPVIVE--QVAA 582 Query: 543 IKKLGSWLAAQQITGFEP 560 + + L A +T EP Sbjct: 583 LAPVIDKLIAAGVTLHEP 600 >UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2H2_9SPHI Length = 791 Score = 440 bits (1131), Expect = e-122, Method: Composition-based stats. Identities = 106/463 (22%), Positives = 186/463 (40%), Gaps = 50/463 (10%) Query: 51 EGKSEVEDGVYDQLSARLTQWQRCFGSEPR-DVMMPPLNGA-------VMHPVAHTGVRK 102 E ++ + D +D+L L Q + F + D + G V+H + Sbjct: 2 EDQAVISDFEFDKLLEELVQLETEFPDLLQPDSPSQRVGGTITKEFETVVHAYKMLSLGN 61 Query: 103 MVDKNALSLWMRERS--------DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDW 154 K L + + + + K DGVA++LVY +GKL +A++RG+G +G+D Sbjct: 62 TYSKEELIAFDERVQKGLGGNPYEYFCEMKFDGVAISLVYENGKLVRAVTRGDGTRGDDV 121 Query: 155 TQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQMGG--------INARAKVAG 204 T V I +P V G ++GEIFL + N R +G Sbjct: 122 TANVRTIRNIPLYVKGDKIPERFEVRGEIFLPHREFEKINAERNENGEALMANPRNAASG 181 Query: 205 LMMRQDDSDTL-NSLGVFVWAWPD---GPQLMSDRLKELATAGFTLTQTYTRAVKNADEV 260 + QD S L + + G + + + + GF ++ TY R ++V Sbjct: 182 TLKMQDSSVVAKRRLNCYFYQLLGEDIGVNAHDEAISLIESWGFNVSPTY-RKTNTIEDV 240 Query: 261 ARVRNEWW--KAELPFVTDGVVVRAAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKA 316 +W + LP TDGVV++ + E + W +A+KY+ + E+ + Sbjct: 241 LTYIEDWREKRFTLPLDTDGVVLKINDYEQREELGFTAKNPRWAIAYKYKAESSETELLS 300 Query: 317 IQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPR 376 + + VG++G I+ VA+LAPV L V+R ++ + + + GD + V G+ IP+ Sbjct: 301 VTYQVGRTGAITPVANLAPVSLAGTTVKRASLHNANEIERLGLHTGDVVFVEKGGEIIPK 360 Query: 377 IDDV-VWRGAERTKP-----------TPPENRFNSLTCYFAS-DVCQEQFISRLVWLGAK 423 I V + + +KP TP E + + + C Q + R+ K Sbjct: 361 ITGVSLEQRKPDSKPIEYISECPECGTPLERKEGEAKHFCPNASNCPPQVLGRIEHFVHK 420 Query: 424 QVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTPG 464 + + +D +G RAL ++ L L Sbjct: 421 RAMDIDSLGTERIRALIDQGFIQNPADIYDLESKQSDLLGLEM 463 Score = 95.7 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 14/139 (10%) Query: 433 EAGWRALHQTHRFEHIFSWLLLTPEQLQNT-PGIAKSKSA--------QLWHQFNLARKQ 483 EA A + I L L E Q I K K+ + ++KQ Sbjct: 569 EAILEASKRHGTVHRI--LLDLDLELSQELRERIKKLKANTFQEGVISNMMEGIAASKKQ 626 Query: 484 PFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN 540 PF + + A+G+ AAL A S +L ++ + ++ G G + + E+ Sbjct: 627 PFEKVLFALGVRNIGENTAALLAQHFGSIDKLNEASTEELLEINGVGETLVQSIHEFFSR 686 Query: 541 AQIKKLGSWLAAQQITGFE 559 + + S L + Sbjct: 687 QENLDIISRLKKSGLQFDA 705 >UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VLG0_9BACT Length = 673 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 105/569 (18%), Positives = 207/569 (36%), Gaps = 48/569 (8%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMM 84 +EI L Q+ D Y+ + D +D +L + + G S ++V Sbjct: 1 MNKEIQSLVNQLNAASDAYYNGRDELMTDYEWDAAFDKLKKLEEETGIILPDSPTQNVSA 60 Query: 85 PPLNGAVM-HPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAI 143 + G H + K L+ W E +W+ K+DG+ + + Y +GKL K + Sbjct: 61 DNVAGKKEEHEFPALSLAKTKKVEDLAKWA-ENKPIWLSWKLDGLTLVVTYDNGKLTKVV 119 Query: 144 SRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ----QQMGGINAR 199 +RGNG G + T + I + QT+ + ++GE + Q + N R Sbjct: 120 TRGNGHIGTNITHLSTAIDGILQTIPYK-GHLVIRGEAVISYPDFEQFNMEAEEEYANPR 178 Query: 200 AKVAGLMMRQD----DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK 255 +G + +D + L + + + R++ L GF + Sbjct: 179 NLASGSLTLKDINEVKARHLRWIPFTLVYTEEEINSWGGRMEWLEHQGFRVVDRELIEQP 238 Query: 256 NADEVARVRNEWWK-------AELPFVTDGVVVRAAKEPESRHWLP---GQAEWLVAWKY 305 + + V + W + + P+ DG+V+ + A+K+ Sbjct: 239 TVNNIEAVIHHWTERVTGVSSSPFPYPVDGLVISYEDTVYAATGSVTGHHATRAGYAFKW 298 Query: 306 QPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA-PGDQ 364 Q + E+ I+++ S IS VA P+ L+ V+R ++ ++ + I G + Sbjct: 299 QDESAETELDYIEWSCAAS-TISPVAVFRPIELEGTTVKRASLCNISECERLGIGDKGTK 357 Query: 365 ILVSLAGQGIPRIDDVVWRGAERTKP-TPPENRFNSL----------TCYFASDVCQEQF 413 I V A + IP++ +V+ P T P + T + + C + Sbjct: 358 IAVIKANKIIPKVINVIESVGTFHIPETCPVCHSATEVSESEVSGTRTLHCTNTHCPAKQ 417 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE--QLQNTPGIAKSKSA 471 + + +K+ + +DG+ E + LT +L+ G Sbjct: 418 LKKFGRFVSKEGVNIDGLSEQTVQKFINLGWVREYADLFHLTEHATELRTMEGFGNKSVT 477 Query: 472 QLWHQFNLARKQPFTRWVMAMGIPLTR-----AALNASDERSW--SQLLFSTEQFWQQLP 524 +L AR R + A+ IPL L+A + + + E + + Sbjct: 478 KLLAAIEKARNVEARRLLFALNIPLVGQDVCNRLLSAYPLEELIKTAIESAAEDVFSTIA 537 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 G G ++ + W ++ + + L A+ Sbjct: 538 GIGPEKSASFVRWMKDTDNQSMLQHLLAE 566 >UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XV29_9BACT Length = 678 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 111/600 (18%), Positives = 213/600 (35%), Gaps = 70/600 (11%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRD 81 + + L Q+ + D Y+ + D +D RL + G S Sbjct: 2 TEDKHKIMEALVLQLNEASDAYYNGKGEAMTDFEWDAAFDRLKALEEELGEVLPNSPTNS 61 Query: 82 VMMPPLNG-AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLN 140 V L G H + K + L+ W ER +W+ K+DG+ + + Y +GKL Sbjct: 62 VSADKLKGQKEEHEYPALSLAKTKSETELAKWAEERP-IWLSWKLDGLTLVVTYDNGKLT 120 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ----QQMGGI 196 K ++RGNG G + T + I + TV + ++GE + Q + Sbjct: 121 KVVTRGNGHIGTNITHLAAAIDNILPTVKAN-GHIVIRGEAVISYADFEQFNLESEEEYA 179 Query: 197 NARAKVAGLMMRQD----DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTR 252 N R +G + +D + L + + + DR+ L GF + Sbjct: 180 NPRNLASGSLTLKDINEVKARHLRWIPFSLVHTDEEIISWGDRMAFLDKLGFNTVERELI 239 Query: 253 AVKNADEVARVRNEW--------WKAELPFVTDGVVVRAAKEPESRHWLP---GQAEWLV 301 + A+ + +V W K + P+ DG+V+ + Sbjct: 240 TLPTAENIEKVIATWTLRVTDTTRKDKQPYPVDGLVITYDDTEYAATGSVTGHHATRAGF 299 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA- 360 A+K+Q + ++ I+++ + IS VA PV L+ V+R ++ ++ + I Sbjct: 300 AFKWQDESVETTLEYIEWSCA-TSTISPVAVFKPVELEGTTVKRASLCNISECERLGIGD 358 Query: 361 PGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE-----------NRFNSLTCYFASDVC 409 G +++V A + IP++ V T PT + T + + C Sbjct: 359 AGTKLMVIKANKIIPKVISVTECLGSFTIPTTCPVCHQPTQIVESEASGTRTLHCTNHHC 418 Query: 410 QEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTPGIAK 467 + + + +K+ + +DG+ E + L E L+ G + Sbjct: 419 PAKQLKKFARFVSKEGINIDGLSEQTVQKFINLGWVSEYADLFHLQEKAEALKYMEGFGE 478 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERS--WSQLLFST--------- 516 L +RK + + A+ IPL + + +L+ + Sbjct: 479 KSCDNLLTAIEKSRKVEAKQLLFALSIPLVGKDVCTRLLSAYPLEELINKSRENMVSPTL 538 Query: 517 ------------EQFWQQLPGTGSGRARQVIEWKEN----AQIKKLGSWLAAQQITGFEP 560 E+ + + G G ++ + W ++ AQ+++L L Q T EP Sbjct: 539 QRSLFEEPRPNNEEIFSTIDGIGPEKSASFVGWMQDDSNYAQLQRLLQELTVSQ-TSSEP 597 >UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB60_9BACT Length = 658 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 102/446 (22%), Positives = 180/446 (40%), Gaps = 47/446 (10%) Query: 115 ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN 174 E+ + V+PKVDG+AV+L+Y +G + +RG+G +G++ T + + ++P + G A Sbjct: 5 EQLEWLVEPKVDGLAVSLLYENGVFTRGATRGDGERGDEITDNLKTLRSIPLRLHGKGAP 64 Query: 175 --STLQGEIFLQREGHIQQ--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVW 223 ++GE++L G + + NAR AG + + D + L + ++ Sbjct: 65 EVLEVRGEVYLPVAGFQRIREEMIAAGEEPFANARNTAAGTLKQLDPALVAKRPLEIVLY 124 Query: 224 AWP----DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTD 277 D P + L+ + G + +TR A+EV + +E + F TD Sbjct: 125 GLGEISVDPPPTQAALLEWMKAFGLRTPK-FTRVCHTAEEVMKAIDELDSIRDGFGFETD 183 Query: 278 GVVVRAA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 G V++ ++ E + +W AWKY +++I VG++G ++ VA L P Sbjct: 184 GAVIKLNSIEQRERVGYHSRAPKWAKAWKYVSEQAETVLESITIQVGRTGVLTPVAELRP 243 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV-WRGAERTKPTPPE 394 V L + R + + + DI GD +L+ AG+ IP + VV + +P P Sbjct: 244 VFLRGSTISRATLHNEDEIKRKDIRIGDTVLIEKAGEVIPAVVKVVLEKRPSSAQPFPFP 303 Query: 395 NRFNSLTCY-------------FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 + C+ + C Q RL + + L +DG+G L + Sbjct: 304 H--ECPVCHSQAKRDPNFAVWVCENVNCPAQLTRRLEYFAKRGALDIDGLGGIVADKLVE 361 Query: 442 THRFEHIFSWLLLTPEQLQNT-------PG-IAKSKSAQLWHQFNLARKQPFTRWVMAMG 493 L EQL P + + ++ A+ QP RW+ A+ Sbjct: 362 RSLVRDPLDLFELKLEQLATLNLGTDDEPRVFGEKNATKVTEAIKRAKTQPLARWLHALA 421 Query: 494 IPLTRAAL---NASDERSWSQLLFST 516 IP A S + S Sbjct: 422 IPEVGEETAHDLAKHHPSLEAVRDSA 447 >UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZ73_9ACTO Length = 806 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 108/498 (21%), Positives = 195/498 (39%), Gaps = 55/498 (11%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA A + L +I Q DY+ D YD L L + + S + Sbjct: 30 PAEATAKWRDLVTEINQMRFDYYNLDAPTASDAEYDVLFEELKDLEAKWPMLVTPDSPTQ 89 Query: 81 DVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGVAV 130 V +N V H + + + A W+ + ++ + KVDG+AV Sbjct: 90 TVGGSAVNTFAPVAHRIPMLSLDDVFSVEATHQWLDRCLTGLGMNQVEILAEVKVDGLAV 149 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGHI 189 +++Y +G L +A +RG+G GED T V IS VP+ ++G A+ ++GEI+ + Sbjct: 150 SILYENGLLTRAATRGDGRVGEDVTANVLTISNVPRQLTGDFPASVEVRGEIYFPIADFL 209 Query: 190 --------QQQMGGINARAKVAGLMMRQDDSDTLNS------LGVFVWAWPDG-PQLMSD 234 + + +NAR AG + ++D ++T G+ ++ P Sbjct: 210 DFNEQRALRGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVCHGIGIYEGGQSQPDSQHA 269 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--R 290 ++L G +++ YTR + E+ V + +A+L DG+V + Sbjct: 270 WYEQLKAWGLPVSE-YTRLISTHAEIDEVIEYFGKHRADLSHEIDGMVFKVDSRQYQAAL 328 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 W A+K+ P + I+ VG++G+++ + V++ V + + Sbjct: 329 GTTSRAPRWAAAYKFPPTEVHTRLLDIRTQVGRTGRVTPYGVMEKVLVAGSHVSSATLHN 388 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAERTKPTP-----------PENR 396 + + GD +++ AG IP I V G+ER P P Sbjct: 389 QDEVKRKGVLIGDMVILRKAGDVIPEILGPVESLRDGSERAFVMPSHCPSCGAPLAPAKE 448 Query: 397 FN-SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALH--QTHRFEHIFSWLL 453 + L C + C Q R+ ++G + ++G+G+ AL + +RFE I + Sbjct: 449 GDVDLRCPNQAS-CPAQITQRISFMGGRSAFDIEGLGDESALALTQPEVNRFEVISALAA 507 Query: 454 LTPEQLQNTPGIAKSKSA 471 P L T Sbjct: 508 GEPVLLAETDTSEDKTIQ 525 Score = 92.6 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 3/92 (3%) Query: 471 AQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTG 527 ++ Q A++QP R + A+ I + A RS L ++ + G G Sbjct: 625 TKMLDQLEKAKQQPLWRVLNALSIRHVGPTASQALADHFRSLDALQQASVAELAAVEGVG 684 Query: 528 SGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 A V+ W + K + + AA + + Sbjct: 685 QIIAEAVVAWFQVDWHKHIVNTWAASGVRMED 716 >UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepID=C9LC53_RUMHA Length = 671 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 112/577 (19%), Positives = 213/577 (36%), Gaps = 57/577 (9%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMMPP 86 E+I +L + + Y+ E + D YD++ L + ++ G S + V P Sbjct: 11 EKIKQLVDYLNLQRNAYYNENSPNISDAEYDRIFDELVELEKQTGFILSNSPTQTVGYTP 70 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 ++ V HPV + K L + ++ L++ K+DG+ LVY +G L +A + Sbjct: 71 ISELPKVKHPVPLLSLDKTKQVQDLISFAGKQPVLFM-LKLDGLTTKLVYENGTLVEAST 129 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM--------GGI 196 RG+G GE T + VP ++ + GE F+ + + Sbjct: 130 RGDGEIGELITHNIPAYVDVPLSIPYK-GRLVIVGESFIPTHDFERLKETLRDGKGEPYK 188 Query: 197 NARAKVAGLMMRQDDS----DTLNSLGVFVWAWPDGPQLMSD----RLKELATAGFTLTQ 248 N R +G + D + L+ + V D P L D ++ L GF Sbjct: 189 NGRNLASGSVRSLDPANCAGRCLHFMPFNVLEGLDSPFLFPDSRAMKISSLFDYGFQPCP 248 Query: 249 TY--TRAVKNA---DEVARVRNEWWKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLV 301 + + + R+ + K LP DG+V+ S+ + + Sbjct: 249 YIAANHPLTSELVNQYIERLTDLAGKKHLP--IDGIVMIFDSLDYSKNCGRTGHHYKDGL 306 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 A+K++ ++ I++ + G+I+ V PV +D V R + ++ +E ++ P Sbjct: 307 AFKFEDETYETTLRNIEWTPTRFGEIAPVGVFDPVEIDGCSVSRATLHNLTFIKELELVP 366 Query: 362 GDQILVSLAGQGIPRIDDVVWRGA--ERTKPTPPENRFNS-------------LTCYFAS 406 G +I VS IP I++ + RG + P P + T + + Sbjct: 367 GCRISVSKRNMIIPHIEENLERGHYVDAVPPVCPCCGSQTRIYQRKGNDGRLIETVHCDN 426 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTPG 464 C Q R K+ + ++G+ E + L E++ G Sbjct: 427 PNCDSQIRKRFTHFVGKKAMNIEGLSETTLEKFLTLGYLQTFPDIYHLNEHQEEILQLEG 486 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASD----ERSWSQLLFST--EQ 518 K +LW+ +R F R++++M IP+ + S + + + Sbjct: 487 FGKKSFERLWNSITSSRNTTFVRFLVSMDIPMVGRTKSRILDTVFHGSLQEFFDAASGDY 546 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + QL G + + +W + L L + I Sbjct: 547 DFTQLDDFGDTLNQNIHDWFSDENNLILWHELQKELI 583 >UniRef50_D1P0P2 NAD-dependent DNA ligase adenylation domain protein n=2 Tax=Providencia RepID=D1P0P2_9ENTR Length = 557 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 184/528 (34%), Positives = 295/528 (55%), Gaps = 24/528 (4%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG--SEPRDVMMPPLNGAV 91 RL Q+++W+ +Y +G S + D VYDQL ++ Q QRC V +P L V Sbjct: 34 HQRLGNQLQEWNKNYLVDGFSPINDEVYDQLLSKWQQRQRCLSLSDSLPQVPLPILTPLV 93 Query: 92 MHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKG 151 HP+ HTG++K + N ++ W+ +R ++W+QPKVDGVAV+LVY +G+L ISRGNG++G Sbjct: 94 KHPLPHTGLKKQ-NLNEITTWIAKRKEIWLQPKVDGVAVSLVYDNGQLVSLISRGNGVEG 152 Query: 152 EDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQ-D 210 +W +K I +P+ + LQGE+F + H+Q+Q+GG+NAR+KVAG +MR+ Sbjct: 153 LEWRKKADFILDLPKVIPIK-QRVILQGELFWKLNNHVQKQLGGLNARSKVAGWLMRKKL 211 Query: 211 DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA 270 +++G+F+WAWPDG +L L+ GF L++ Y+ V + +++ + + +++ Sbjct: 212 PEKIEDNIGIFIWAWPDGDLQQEVQLSRLSEIGFDLSKRYSHQVTSIEQIIQRQEDYFST 271 Query: 271 ELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVV 330 LPF TDG+V+++ P S W Q W +AWKY ++E+ ++F VG++G ++VV Sbjct: 272 PLPFATDGIVLKSFPTPPSAAWQSNQNSWAIAWKYPLQNIISEITGLKFGVGRTGIVNVV 331 Query: 331 ASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP 390 AS+ PV LD K+V VN+GS+ W++ D+ GD I ++LAG GIP+++ V+WR A R P Sbjct: 332 ASIKPVTLDAKQVSHVNLGSLNSWKKKDLLVGDHIQLTLAGHGIPKVEQVIWRVAHRDYP 391 Query: 391 -TPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 T +FN +C+ S C QF++RL WLG + LG+ G+GE W+ + + + Sbjct: 392 ETMLLEQFNRWSCFSYSIECLPQFVARLTWLG--KQLGIKGVGEKTWQQWAENYGLSQLL 449 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQL--WHQFNLARKQPFTRWVMAMGIPLTRAALNASDER 507 W L+P P L Q QP W+ + IPL+ + D Sbjct: 450 EW--LSPSWQGQLP----KTKTNLKHLEQLQKVADQPLAVWLKGLDIPLSNTEIKKID-- 501 Query: 508 SWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIK---KLGSWLAA 552 + S L T + +L R +Q W E +IK ++ + Sbjct: 502 TISMLYEPTIIKYLKLSD---KREQQFKHWIEVTEIKLALQIIQEIKK 546 >UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4SB11_OSTLU Length = 755 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 116/630 (18%), Positives = 209/630 (33%), Gaps = 119/630 (18%) Query: 44 WDDDYWKEGKSEVEDGVYDQLSARL------TQWQRCFGSEPRDVMMPPLNG----AVMH 93 D Y+ + + + D YD + AR G V P + H Sbjct: 2 HDGKYYNDAEPVISDSEYDGMRARYDAIAAAHPTAAKAGGARARVGATPDGASGLEKIAH 61 Query: 94 PVAHTGVRKMVDKNALSLWMRERS----------------DLWVQPKVDGVAVTLVYRDG 137 V + D + +M+ + +PKVDG + +L Y +G Sbjct: 62 AVPMRSLGNAFDVGQVEAFMKRVEKLRGETEGEAATTTAIEYCAEPKVDGASASLRYENG 121 Query: 138 KLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGHIQQQMGGI 196 +L A+SRG+G GED T+ + VP ++ P A ++GE+ + E + Sbjct: 122 ELVYAVSRGDGEMGEDVTRHLIGARGVPMKLAEPYPAVLEIRGEVHVADEDFQRVNAERA 181 Query: 197 --------NARAKVAGLMMRQDDSDTLNSLGVFVWAWP---------DGP-QLMSDRL-K 237 NAR AG M D L + W + P + S+ L Sbjct: 182 ATGLRVFKNARNAAAGAMRTLVVDDNQMPLRFLAYGWGAVGASNEETNAPWRTQSEFLSA 241 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAA--KEPESRHWL 293 L GF + K E+ + E + +P+ DGVV + + + Sbjct: 242 FLPAQGFDAVP-FLGVAKTIGELIEAYDALEIARPTMPYEIDGVVYKVNSVELQTALGAD 300 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 Q W +A K+ ++ V ++AI+ VG++G ++ VA L PV + + R + + Sbjct: 301 ARQPRWAIAHKFTAMSAVTTLRAIEIQVGRTGALTPVALLDPVDIGGASISRATLHNFDE 360 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDV--------------VWRGAERTKPTPPENRFNS 399 + G Q+ V AG IPR+ + + E P+ + +S Sbjct: 361 IARKHLKVGAQVTVERAGDVIPRVVSLAGDDLAEASAYAEDIKPLPEWLPPSKCPDCGSS 420 Query: 400 L---------------TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHR 444 + C Q + RL+ A+ L + G+ LH+ Sbjct: 421 VVRAPLSASKTAMGSIVRCTGGLKCPSQSMERLLHFCARDALDIRGLARGTLETLHREGV 480 Query: 445 FEHIFSWLLLT----PEQLQNTPGI------------------AKS-KSAQLWHQFNLAR 481 + L P+ P + +L+ + R Sbjct: 481 VKTPADIFTLERRFGPDSGDAVPTWWRYAGVKNSKGEIKHGSDGLKQSAVKLFQAIEVRR 540 Query: 482 K-QPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE------------QFWQQLPG 525 + P R++ A+GIP A + A+ S + + + G Sbjct: 541 QGVPLHRFIYALGIPNIGAHTAKVLATHYGSLAAFKKAALAAAKGGPASLAHAALTHVDG 600 Query: 526 TGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 G A+ ++++ + + A + Sbjct: 601 VGPVLAQSLVDFWGEPGNAFIVDEIIATGV 630 >UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM Length = 647 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 102/548 (18%), Positives = 198/548 (36%), Gaps = 39/548 (7%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVM--MP 85 ++ L + + + Y+ + + + YD+L L + G S +V Sbjct: 6 RMNELIDILSKANKAYYSDANEIMSNREYDELYDELQALEEESGIVLAASPTVNVGYEAS 65 Query: 86 PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISR 145 + H + K + L W+ E+ L + PK+DG+ V + Y +G L A++R Sbjct: 66 SSLEKMAHEKKMLSLNKTKSVDELVEWLGEQEGL-LSPKLDGLTVVITYDEGSLKLAVTR 124 Query: 146 GNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG------GINAR 199 G+G++GE T+ +P + L+GE ++ + N R Sbjct: 125 GDGVEGEVITKNAKTFIGIPLKIPYA-GRLVLRGEAYITYGDFNKLNEEIDDAAKYKNPR 183 Query: 200 AKVAGLMMRQDDSDTLNSLGVF-----VWAWPDGPQLMSDRLKELATAGFTLTQTYTRAV 254 +G + D S T F + G + +K L GF + T Sbjct: 184 NLCSGSVRNLDPSITKERRVRFKVFSMLGGIEHGFNKKRECMKWLGDIGFDVVHTEMVTG 243 Query: 255 KNA-DEVARVRNEWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWKYQPVAQV 311 +N D + + E ++P DG+V+ + +A+K+ Sbjct: 244 ENLKDTMNSLMEELQNGDIP--VDGLVLTYDDIKTCNLLGETAKYPKDSIAFKWSDELYD 301 Query: 312 AEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAG 371 E+ +++ ++G ++ VA +PV + V+R + ++ + GD+I V A Sbjct: 302 TELTGVEWNTSRTGLVNPVAVFSPVEISGTTVKRAALHNLDILDGLALGKGDKIRVYKAN 361 Query: 372 QGIPRIDDVVWRGA--ERTKPTPPENRF------NSLTCYFASDVCQEQFISRLVWLGAK 423 IP++ + + R E K P + +D C + R+V K Sbjct: 362 MIIPQVYENITRSGNIEYPKVCPVCGCGLKLETEGARVLRCVNDDCPAKNAKRIVHFAGK 421 Query: 424 QVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQLWHQFNLAR 481 + + GI E L T + L + +++ G + L + A+ Sbjct: 422 SGINIKGISEKTIEKLIATGIIRNEVDLLDIENYKDEILKLDGFKEKSFENLKKAIDGAK 481 Query: 482 KQPFTRWVMAM---GIPLTRA-ALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 R++ AM GI T A + A+ +L T + + G G + Sbjct: 482 TMTLQRFISAMAFTGIGYTNAGKIAAALGFDVMKLFELTPEKINNIEGLGEVLTESFMAE 541 Query: 538 KENAQIKK 545 + +K+ Sbjct: 542 LSDENMKR 549 >UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 201phi2-1 RepID=B3FJJ3_9CAUD Length = 695 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 110/589 (18%), Positives = 217/589 (36%), Gaps = 75/589 (12%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA 90 + E L ++I+ ++ Y+ S + D +YDQL L ++ P V Sbjct: 4 RHEYDVLCKRIRHYNYMYYVLDISIIPDSLYDQLLISLKLLEKEH---PEWVTRDSPTQT 60 Query: 91 VMHPV------------AHTGVRKMVDKNALSLWM------------RERSDLWVQPKVD 126 V HPV + + + W E +++ + K+D Sbjct: 61 VGHPVYESHFELVKRVKPMLSLDNLFTCDEAVDWSIDIHGDIYVGKKDESAEIVAEWKMD 120 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQR 185 G+++ + Y + A +RG+G GED T ++ +P+ + P +++GE+ ++ Sbjct: 121 GLSLDVNYTYDTMELASTRGDGTTGEDVTPNAMVVEGIPRVLKTPRHGGVSIRGEVVVRL 180 Query: 186 EGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNSLGVFVWA-----WPDGPQLM 232 + Q N R AG + ++D T VFV D Sbjct: 181 ADYNQINADLEAAGKKTFANPRNYAAGSLRQKDPRITRERKLVFVAYSVERTLGDPEATW 240 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEV------ARVRNEWWKAELPFVTDGVVVRAAKE 286 D L GF T R + + + ++ PF DG+V + K Sbjct: 241 YDDQAWLKENGFYTADTGKRLSHDQRGMTSGFPALIAECQAERSSYPFEVDGIVFKVVKH 300 Query: 287 P--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 E+ + W A+K+ + ++ VG++GK++ +A + P+ + + Sbjct: 301 THRETLGYTSRFPRWGRAYKFPASKGETRLISVDRQVGRTGKLTPMARIEPIHVHGTTIS 360 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR-------GAERTKPTP----- 392 V I +++ ++ + G + +S AG IP ++ + G P Sbjct: 361 NVTIHNLKELEQHKLFEGCYVEISRAGDVIPYLERRITDHNGEKLYGEVEACPCCGTKVV 420 Query: 393 -------PENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHR- 444 EN S T Y + C+++ ++ L++ + VL + G+G+ L+ Sbjct: 421 VVHGKKTKENPEGSRTEYCPNTKCKDRQVAHLLYCTQRHVLNIKGLGDELVMDLYNAGVV 480 Query: 445 -FEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFN-LARKQPFTRWVMAMGIPLT---RA 499 S L+L E G ++ + +L + TR + A+GI A Sbjct: 481 DVTRPLSLLMLKHEDFLKI-GQSERMAEKLAMAVTIASANLDLTRVITALGISGAADGTA 539 Query: 500 ALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGS 548 A + R+ ++ +T ++ G A+ + E+ + K G Sbjct: 540 ERLAREIRTLEEISIATIDRMLEIDDIGDVTAQSIFEFFDEDNRKPHGQ 588 >UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=DNLJ2_ARTCA Length = 701 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 117/576 (20%), Positives = 232/576 (40%), Gaps = 62/576 (10%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA 90 +EE Y E+ D +D+L A++ + G EP + + Sbjct: 37 EEEYQAAVTTALSAAKAYETTDVEEMNDAEFDRLLAKIASHEAANGIEPEHDLHDTIGHG 96 Query: 91 ------VMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 V H + K ++A+ + + ++PK+DG+A+++ Y +GK+ +A Sbjct: 97 GAGGGDVEHATPMKSLEKP-GEDAVIEFAAKHPKAVIEPKIDGLAISVRYENGKMVRAAR 155 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM--------GGI 196 RG+G GED T +V + +P+ + ++GE++L E + Sbjct: 156 RGDGYTGEDVTDRVRGVDGLPEM--AGDGDYEVRGELYLNDENKAKANAIRQAAGKAPFA 213 Query: 197 NARAKVAGLMMRQDDSDTLNSLGVFVWAW----PDGPQLMSDRLKELATAGFTLTQTYT- 251 NAR VAG++ +QD S G+F +A D D +++L GFT ++ Sbjct: 214 NARNGVAGMLNKQDGS----YAGLFSFAAYSTTIDEKADHLDSMQQLEGMGFTTARSLLP 269 Query: 252 RAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQP 307 ++V +A++ + L F+ DG V++ E +W VA+KY Sbjct: 270 QSVLDAEDPMAAIAALGAERKGLNFLMDGAVLKVNTAAERAELGEGSRAPKWAVAYKYPA 329 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 V + ++ I++ +GK+G++S+ A L PV +D V+ ++ +V Q D+ GD + Sbjct: 330 VEEPTVIEDIEYNIGKTGRLSIRARLTPVEVDGSVVEYASLHNVGHLQAADMRIGDTVSA 389 Query: 368 SLAGQGIPRIDDVVWRGAERTKPTPP-ENRFNSLTC-----------YFASDVCQEQFIS 415 A IP++ + R R + + P + C + C Sbjct: 390 YKANDIIPQVH--LPRADLRDESSQPWQPPSVCPQCSEPFDKSTELWRCHTPECS--VSG 445 Query: 416 RLVWLGAKQV-LGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP----------G 464 R+ + ++ L ++G+G + AL + + + L +QL Sbjct: 446 RISYAASRDAGLDIEGLGGSIGDALIEKDLVKDVSDLFYLGEDQLAEVELGETSTGGTRT 505 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQFWQ 521 + + +A++ + A+ QP R + A+ + T A++ + L +T Sbjct: 506 LGQKNAAKIMAEIEKAKSQPLNRVITALSMRFTGRTFGRRLAAEFGTMEALQAATVSQLA 565 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + G G +A + E + + + + L + Sbjct: 566 NVEGIGQKKAEVIHE--QLKKNAPVIAKLREAGVNM 599 >UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDQ2_BRAFD Length = 871 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 113/511 (22%), Positives = 182/511 (35%), Gaps = 94/511 (18%) Query: 23 PAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------ 76 P + AQ+ I+ L +I+Q DY++ + D YD+L L + Sbjct: 14 PRTADETAQQRIAALTARIEQARVDYYEHDAPTMADAEYDELEKELRALEEANPQLAAED 73 Query: 77 SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLW-------MRERSDLWVQPKVDG 127 S R V G + H + + L W + + K+DG Sbjct: 74 SPTRTVGGAAAAGLPTIDHAERMQSLDNVFSLEELREWCAHAAAELGGEVRYLTELKIDG 133 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQGEIFLQR 185 +A+ L Y G+L A +RG+G GED T I +PQ +SG A ++GE+F+ Sbjct: 134 LAINLRYEHGELVTAATRGDGRTGEDVTVNALQIDGIPQRLSGSGHPALVEVRGEVFMPT 193 Query: 186 EGHIQQQM------------------------------------------GGINARAKVA 203 + N R A Sbjct: 194 ADFERLNDLQVELRERAVAESRTRWESRQGSGRRPFDEQRESLAAARRFPTFANPRNTAA 253 Query: 204 GLMMRQDDSD----------TLNSLGVFVW---AWPDGP-QLMSDRLKELATAGFTLTQT 249 G + +Q D L +L + V AWPD P S+ + LA+ G + Sbjct: 254 GGLRQQLDKKEGLEREAGEARLAALRLTVHGLGAWPDPPVGSQSEMYELLASWGLPTS-R 312 Query: 250 YTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKY 305 Y V + DEVA + +L DG+VV+ + R W +A K+ Sbjct: 313 YMDVVDSIDEVAAYVEHHGEHRHDLEHEIDGIVVKVDSFAQQRALGSTSRAPRWAIAVKF 372 Query: 306 QPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQI 365 P ++ IQ VG++G+++ + PV + V++ + + + + GD I Sbjct: 373 PPEEVTTKLLDIQVQVGRTGRVTPFGVMEPVTVAGSTVEKATLHNQFDVERKGVLIGDTI 432 Query: 366 LVSLAGQGIPRIDDVVW---RGAERTKPTP-----------PENRFN-SLTCYFASDVCQ 410 ++ AG IP I V G+ER P PE + C D C Sbjct: 433 VLRKAGDVIPEILAPVESLRDGSERPFVMPAQCPACGTEIRPEREGDKDWRCPNQRD-CP 491 Query: 411 EQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 Q R+ G++ ++ +GE AL Sbjct: 492 AQVTGRVEHAGSRGAFDIESLGEESAIALTD 522 Score = 85.6 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 3/93 (3%) Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLP 524 + L + A+ QP R ++A+ I A A+ S + ++ + Sbjct: 655 KSTEVLISELEKAKSQPLWRVLVALSIRHVGPTAARSLATAYGSMDAIREASVEQLSDTD 714 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 G G A V+EW ++L A + Sbjct: 715 GVGEIIAEAVVEWFAVDWHRELVDGWARSGVRM 747 >UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetales RepID=D1BVV0_XYLCX Length = 830 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 135/687 (19%), Positives = 223/687 (32%), Gaps = 152/687 (22%) Query: 21 VCPAWSPAR-----AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 P S A AQ + L+ ++ Y++ V D YD L + Sbjct: 2 TTPDLSTAELDEQAAQRRWAELRDLVEADQRAYYEHDSPLVSDAEYDARLHELAALEAAH 61 Query: 76 G------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDL 119 S + V +G V H + + + L W Sbjct: 62 PALATPESPTQRVGGAAASGFTTVEHVERMLSLDNVFSVDELRDWDARVARDLGAGDVGY 121 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTL 177 + K+DG+A+ L+Y G+L +A +RG+G GED T I+ VPQ + G A + Sbjct: 122 LAEVKIDGLAIALLYEHGRLTRAATRGDGRTGEDVTVNALRIADVPQQLDGEGHPALVEV 181 Query: 178 QGEIFLQREGHIQQQM-----------------------------------GGINARAKV 202 +GEIF+ + N R Sbjct: 182 RGEIFIPTASFTRLNELQEELRARVVEDTRARQGARFDEEKARLAALRRFPTFANPRNAA 241 Query: 203 AGLMMRQDDSD----------TLNSLGVFV-------WAWPDGPQL--MSDRLKELATAG 243 AG + +Q D + SL ++V W + +L SD AT G Sbjct: 242 AGGLRQQLDKKDGLERDAGLARIESLRLYVHGIGALQWEAGEHAELGRQSDAYSYFATWG 301 Query: 244 FTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEW 299 ++ + R V D V + + + ++ DG+VV+ P+ W Sbjct: 302 LPVSP-HNRVVNGIDAVIEMIEHFGAHRHDIEHELDGIVVKVDALPDQQRLGATSRAPRW 360 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +A+KY P + AIQ VG++G+ + A + PV++ V++ + + + + Sbjct: 361 AIAYKYPPEEVNTRLLAIQVGVGRTGRATPYAVMEPVLVAGSTVRQATLHNQDVVRAKGV 420 Query: 360 APGDQILVSLAGQGIPRIDDVVW----------------RGAERTKPTPPENRFN-SLTC 402 GD +++ AG IP I V + E P P + L C Sbjct: 421 RVGDVVVLRKAGDVIPEILGPVPAAADDGFPRHDFVMPAQCPECGTPLRPMKEGDVDLRC 480 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI-----FSWLLLTPE 457 A C Q R+ +G++ L ++G+GE AL Q LT E Sbjct: 481 PNA-RSCPAQVRGRVEHIGSRGGLDVEGLGEVAAAALTQPLEPADPPLDTEAGLFSLTIE 539 Query: 458 QLQNT---------------PGIAKSKSAQLWHQ----FNLARKQPFTRWV--------- 489 +L G+ + SA+L F +PF R V Sbjct: 540 ELLPIRVVVRDPETGLPRPYDGVGE--SAELPTADGATFTAKVVRPFQRLVERTYPPGTE 597 Query: 490 --------MAMGIP--LTRAALNASDERSWSQLLFSTEQFW------QQLPGTGSGRARQ 533 A GI S + +L + + + G AR Sbjct: 598 TMTPAERRKA-GIRKDHPVYGPAKSAQVLLDELDRAKTKDLWRQLVSLNIRHVGPVAARA 656 Query: 534 VIEWKENAQIKKLGSWLAAQQITGFEP 560 + +W + + S + G P Sbjct: 657 LADWFGSLDAIRAASSEELAAVEGVGP 683 Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 11/96 (11%), Positives = 30/96 (31%), Gaps = 3/96 (3%) Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLP 524 + L + + A+ + R ++++ I A A S + ++ + + Sbjct: 620 KSAQVLLDELDRAKTKDLWRQLVSLNIRHVGPVAARALADWFGSLDAIRAASSEELAAVE 679 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 G G ++ W + + + P Sbjct: 680 GVGPVIGAELQAWFDVDWHVDIVDSWTRAGVRFATP 715 >UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q1ZXG5_DICDI Length = 843 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 111/648 (17%), Positives = 228/648 (35%), Gaps = 145/648 (22%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP--RDVMMPPL------N 88 L+ +I +++D Y+ + KSE+ D YD+L RL ++ F + V P Sbjct: 71 LRNKINRYNDLYYNKSKSEISDFEYDKLFKRLEILEKKFNQQTITNQVGAPISDYSNNRG 130 Query: 89 GAVMHPVAHTGVRKMVDKNALSLWMRERS------------------DLWVQPKVDGVAV 130 H ++ K+ + + + + ++ K DG+ + Sbjct: 131 LKFRHKSRMLSLQNTYSKDDIIAFKNKIEKFLLKKQTSQQQQPQQQIEYSLELKYDGIGI 190 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSL-ISAVPQTVSGP-------------LANST 176 +LVY + KL + ++RGNG GED T I ++ ++ P + Sbjct: 191 SLVYENNKLKRVLTRGNGEIGEDITTNALQFIPSLKNLLTLPSNLTVFILFLILKYKDFE 250 Query: 177 LQGEIFLQRE---------GHIQQQMGGINARAKVAGLMMR---QDDSDTLN-------- 216 ++GE+ L + Q N R V+G++ + +D +D+LN Sbjct: 251 IRGEVVLNKSYLKIINKLKLDNNDQHQYKNTRNIVSGILRKSIEEDANDSLNIEPILLLN 310 Query: 217 ---SLGVFVWAWP--------------------------------DGPQLMSDRLKELAT 241 F + + + S LK Sbjct: 311 EQMKFDFFPYFFIPTNNNNNNINNGENENENDNEKENDNEMIIDDERCNTQSKNLKLFEK 370 Query: 242 AGFTLTQTYTRAVK----------NADEVARVRNEWW---KAELPFVTDGVVVRAAKEPE 288 GF + V + + EW + + DG+V++ Sbjct: 371 MGFQIDNGSNTVVTLSTGGGGNNNDIKNIEEFIKEWELKKRENHNWDIDGIVIKVNDINI 430 Query: 289 SR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 R + W A+K+ ++++ +K I VGKSG+I+ VA + P+ + + R Sbjct: 431 QRILGDINRSPRWAFAYKFGAKSEISTIKDIVLQVGKSGRITPVALVEPIQVHGVTISRA 490 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRID----------------------DVVWRG 384 + ++ + +I G ++L+ AG IP+I + +++ Sbjct: 491 TLNNLSYINKLNIKIGSKVLIERAGDVIPKIITNLDDNINNTNTNTNTNNTNNIESLFKC 550 Query: 385 AERTKPTPPE-------NRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 E P NR + + ++ C Q + ++ W K+ + + G+G++ + Sbjct: 551 NENGNILCPCNLKSELVNRVGYVDYFCVAENCPNQLVQQISWFVDKKAMNIQGVGKSQIQ 610 Query: 438 ALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L + E L E+L + G + +K L ++ + + A+GIP Sbjct: 611 VLLENQLIEDFGDLYELYQFKEKLLSLKGFSHTKVNNLLESIEDSKSRGLASLLCAIGIP 670 Query: 496 LTR---AALNASDERSWSQLLFS-TEQFWQQLPGTGSGRARQVIEWKE 539 + + + +S L+ S + + + G G + + + Sbjct: 671 GIGSSNSKILSEKFQSLDNLINSPSIESIELQSGLGRQTSESIFNFFN 718 >UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_BIFAA Length = 892 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 94/485 (19%), Positives = 178/485 (36%), Gaps = 69/485 (14%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------ 77 + S A +R+ ++ Y+ + D YD L + F S Sbjct: 65 SMSAEAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARLRCLQSLEAQFPSLDSPQS 124 Query: 78 EPRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMR-----------ERSDLWVQPK 124 V +V HP + + L W + + + K Sbjct: 125 PTHRVGGTFSNDFASVRHPSRMMSLDDVFSIEELREWYDGVLRGLDWPESKPLPMTCEVK 184 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS----TLQGE 180 +DG+A+ L+YR+G L + ++RG+G+ GED T V IS +PQ ++GP + ++GE Sbjct: 185 IDGLALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTISTIPQNLAGPEEDIPEFVEIRGE 244 Query: 181 IFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP----- 226 +F++ + + N R AG + ++D T L + Sbjct: 245 VFMRWDDFNKLNAENEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGIGSLRWG 304 Query: 227 --------DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVT 276 D S+ + G ++ + R V + E+ + + + + ++ Sbjct: 305 AGHAGNGHDVVNDQSEAYELYKKWGVPVSP-HNREVTSFKEILDMIDYYGEHRGDIEHAL 363 Query: 277 DGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DG+VV+ R W +A+KY P E+ I VG++G+++ VA L Sbjct: 364 DGIVVKVDDLGLQRSLGATSRAPRWAIAYKYPPEEVNTELLDITVQVGRTGRVTPVAVLK 423 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT------ 388 PV + V R + + + + GD ++V AG IP + V + Sbjct: 424 PVYVAGSTVSRTTLHNPFEVERKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREGELRR 483 Query: 389 ------------KPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 + P + + C + C Q R++ L +++ ++ +G+ Sbjct: 484 FVMPTRCPSCGAELAPAKEGDKDIRCPNV-ESCPAQLTERIINLASRKAFDIEHLGDQSA 542 Query: 437 RALHQ 441 AL Sbjct: 543 IALTN 547 Score = 72.9 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 3/77 (3%) Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPL---TRAALNASDERSWSQLLFSTEQFWQQLPG 525 + ++ + + AR R ++A+ I A AS + + ++ Q+ G Sbjct: 707 NTRKMLDEMDKARHADLWRVLVALSIRRLGPPTARTIASAFGTLDAIEHASVDELSQIDG 766 Query: 526 TGSGRARQVIEWKENAQ 542 GS A V+ W A+ Sbjct: 767 IGSEIAESVVTWFTAAR 783 >UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B8R1_9ACTO Length = 777 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 98/477 (20%), Positives = 182/477 (38%), Gaps = 55/477 (11%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 + ++ + L +I + Y+ + D YD++ + + + + S Sbjct: 6 DSTFETTRDRYNDLVDRINEARAAYYDRDSPTLADADYDRMYREVEEIEERYPQLRGADS 65 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDG 127 V +G V H + + L+ W ++ + KVDG Sbjct: 66 PTMSVGGSVDSGFSEVRHLAQMMSLDDVFSLEELAGWETRMAEATGISDLEMTTEVKVDG 125 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLA-NSTLQGEIFLQRE 186 +++ L+Y +G+L +A +RG+G GED T I+++PQT+SG + ++GE++ Sbjct: 126 LSINLLYENGRLVRAATRGDGYVGEDVTANARTIASIPQTLSGTVPTRIEVRGEVYFPVA 185 Query: 187 GHIQQQMG--------GINARAKVAGLMMRQDDSDTLNSLGV-------FVWAWPDGPQL 231 +NAR AG + ++D ++T FV A D + Sbjct: 186 DFAAFNEARVEAGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVAHGIGFVEAGEDFTEP 245 Query: 232 MSDR--LKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEP 287 ++ ++L G ++ YTR + + E + +L DGVVV+ Sbjct: 246 ITQMGWYEQLRDWGLPVSP-YTRVLTGRKAIEERIAELGEKRHDLEHEIDGVVVKINDLD 304 Query: 288 ESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 R W A+K+ P + I+ VG++G+++ + V++ V R Sbjct: 305 LQRSLGSTSRTPRWAAAYKFPPEEVHTRLLDIRVQVGRTGRVTPYGVMESVLVAGSNVAR 364 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW---RGAERTKPTPPENR------ 396 + + + + GD +++ AG IP I V G+ER P E Sbjct: 365 ATLHNAQEVARKGVLIGDLVVLRKAGDVIPEIVAPVEDARNGSERPFVMPTECPSCGTTL 424 Query: 397 ------FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEH 447 L C C Q RL +GA+ L ++G+G+ A+ Q Sbjct: 425 VQEKEGDVDLRCPNKGL-CPAQITERLAHVGARSALDVEGLGDESALAMTQPENDRD 480 Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 3/93 (3%) Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLP 524 + ++ + A+ QP R ++A+ I A A S L ++ + + Sbjct: 593 KGTEKMLVELEKAKSQPLARVLVALSIRHVGPTAARALAEKFLSMDALRAASVEELSAVE 652 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 G G R + +W ++ A + Sbjct: 653 GVGEEIGRSLRDWFTVDWHLEVLQAWARAGVRM 685 >UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=DNLJ_BIFA0 Length = 863 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 100/484 (20%), Positives = 181/484 (37%), Gaps = 69/484 (14%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-EPRDVM 83 + +A SRL ++ Y+ + D YD L + + F + Sbjct: 43 LNVEQAVRLWSRLSAWVEGDQVAYYVKDAPLSSDAAYDARMNCLKRLESEFPQLDTPQSP 102 Query: 84 MPPLNG-------AVMHPVAHTGVRKMVDKNALSLW---MRERSDL--------WVQPKV 125 + G AV HP + + L W +R+ + + K+ Sbjct: 103 THRVGGTFSNDFTAVRHPSQMMSLDDVFSFEELRAWYDGVRKDLEWPEDKLLPMTCEVKI 162 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS----TLQGEI 181 DG+A+ L+YR+G L + ++RG+G+ GED T V I ++P + GP + ++GE+ Sbjct: 163 DGLALNLIYRNGVLTQGLTRGDGVTGEDITMNVRTIHSIPTNLDGPEGDIPDMVEIRGEV 222 Query: 182 FLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP------ 226 F++ + + N R AG + ++D T L + Sbjct: 223 FMRWDDFHKLNEANEDAGRPPFANPRNAAAGSLRQKDPRITAQRHLSFYAHGIGELVWGS 282 Query: 227 -------DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTD 277 D + SD G ++ + R V + D++ + + + ++ D Sbjct: 283 GKPVDVADEVRNQSDAYTMYRKWGVPISP-HNREVTDFDQILDMIEYYGEHRGDIEHALD 341 Query: 278 GVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 G+VV+ R W +A+KY P ++ I VG++G+++ VA L P Sbjct: 342 GIVVKVDDLALQRRLGSTSRAPRWAIAYKYPPEEVNTKLLNIVVQVGRTGRVTPVAILNP 401 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--------WRGAER 387 V + V R + + + I GD ++V AG IP + V E Sbjct: 402 VYVAGSTVSRTTLHNAYEVKRKGILIGDTVVVRKAGDVIPELVGPVIAKREGHEQDLREF 461 Query: 388 TKPTPPENRFN----------SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 PT + L C S+ C Q R++ L A++ ++ +G+ Sbjct: 462 VMPTRCPSCDTVLRYEKEGDKDLRCPN-SESCPAQLAERVINLAARKAFDIEHLGDQSAV 520 Query: 438 ALHQ 441 AL Sbjct: 521 ALTN 524 Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 38/98 (38%), Gaps = 8/98 (8%) Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPG 525 + ++ + A+ +R ++A+ I A A ++ L ++ + +Q+ G Sbjct: 679 NTRKMLDEIEKAKHTDLSRVLVALSIRHVGPPTAFTLAKHFKTLDALADASAEELEQIDG 738 Query: 526 TGSGRARQVIEWKENAQIK-----KLGSWLAAQQITGF 558 G+ A + + E A++ ++ A + Sbjct: 739 IGAEIADSIATFFEEARMPGNWRGRVLEAWKAAGVGMS 776 >UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHH0_9CELL Length = 824 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 107/475 (22%), Positives = 175/475 (36%), Gaps = 62/475 (13%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-GSEPRDVMMP 85 PA + + L +QI+ Y+ D YD+ L + + G D Sbjct: 14 PAEVRHRWTALAEQIRADQFAYYVRDAPSSSDAAYDERMRELERLEDEHPGLRTPDSPTQ 73 Query: 86 PLNG-------AVMHPVAHTGVRKMVDKNALSLWMRERS---------DLWVQPKVDGVA 129 + G AV H + + L W + + K+DG+A Sbjct: 74 QVGGTFSTEFTAVDHVERMLSLDNAFSREDLVAWAERVQRDLESTVPVEYLCELKIDGLA 133 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN----STLQGEIFLQR 185 + L+Y G+L +A +RG+G GED T V IS +P + G A ++GE+FL Sbjct: 134 IALLYEKGRLVRAATRGDGRTGEDVTLNVRTISTIPDVLGGDPATHPDVIEIRGEVFLPV 193 Query: 186 EGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNS------LGVFVWAWPDGPQL 231 + N R AG + ++D T G+ W DG Sbjct: 194 DAFRALNEAQVAAGRAPFANPRNAAAGSLRQKDPRVTAARPLRMYAHGIGALTWGDGRGT 253 Query: 232 ----MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK 285 S LA G + T+TR V + DEV + + ++ DGVVV+ Sbjct: 254 GIDRQSQVYDLLAGWGVPTS-THTRVVGSLDEVWDRVAHFGEHRHDVEHEIDGVVVKVDD 312 Query: 286 EPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 R W +A+KY P + AI+ +G++G+ + A + PV++ V Sbjct: 313 IALQRRLGATSRAPRWAIAYKYPPEEVNTRLLAIELGIGRTGRATPFAVMEPVLVAGSTV 372 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP--------TPPEN 395 ++ + + + + GD +++ AG IP I + + P PE Sbjct: 373 RQATLHNQDVVKVKGVRVGDMVVLRKAGDVIPEIVGPAPQAPDDDVPRVEWHMPADCPEC 432 Query: 396 RFN---------SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 L C A C Q RL +G++ ++ +GE AL Q Sbjct: 433 GTPLRPMREGDVDLRCPNA-QGCPAQVRGRLEHIGSRGAFDIEVLGEVTAAALTQ 486 Score = 58.3 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 37/133 (27%), Gaps = 45/133 (33%) Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLF------------ 514 + L Q +LA+ + R ++A+ I A A + S + L Sbjct: 586 ARTLLDQLDLAKTKELWRAIVALSIRHVGPTAARALAQEFGSMAALRAVVDPTARGAVDA 645 Query: 515 --------STEQFWQQ----------------------LPGTGSGRARQVIEWKENAQIK 544 + + + G G AR +++W + Sbjct: 646 PQEAVDGGAVADDAVEGSIADEDGAPAADAAAVARLAGVEGVGPTIARSLLDWFAEPWHR 705 Query: 545 KLGSWLAAQQITG 557 ++ AA + Sbjct: 706 EIVDRWAAAGVVM 718 >UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=DNLJ_SORC5 Length = 676 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 120/575 (20%), Positives = 216/575 (37%), Gaps = 53/575 (9%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNG- 89 + I L ++I+++ Y+ G E+ D +D L L R + Sbjct: 26 KARIEELAERIEKYRASYYA-GHPEISDAAFDALEDELRALDPAHPVLARVGSASLITEW 84 Query: 90 -AVMHPVAHTGVRKMVDKNALSLWMRE----------------------------RSDLW 120 H + + K+V ++ L W+ DL+ Sbjct: 85 EKARHEIPMGSLNKVVSEDELLGWVARCDEILVKDGHGDGGTGAAPPAPGSISSVAGDLF 144 Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGE 180 V K+DG+++ ++Y+ GKL AI+RG+G GE T V+ + +P + +++GE Sbjct: 145 VAEKLDGISIEVIYKGGKLVDAITRGDGEWGERITANVARMKGIPSRIREK-GRLSVRGE 203 Query: 181 IFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDR--LKE 238 I L+ + G + R AG R D V + D ++ + R Sbjct: 204 IILRLSDMKRHFPGVTSPRNMAAGAAKR-FDGQGAEHCTVLFYDVADHLEIPTCRARFAW 262 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQ 296 L GF QT +V++ ++ R + +A L + DG+VV + + Sbjct: 263 LRELGFATPQTAHGSVEDVVKLYRRYSSELRAGLDYEIDGLVVYVDSLHVQGLLGDVNRR 322 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 VA+K+ A+V V AIQ+ G SG+++ VA + PV L V+R ++ + + Sbjct: 323 PRGAVAFKFASPAKVTTVVAIQWDTGPSGRVTPVAIVEPVELAGANVRRASLHNSANVRS 382 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVW-RGAERTKPTPPENRFNSLTC-----YFASDVCQ 410 I GD++LVS IP +++VV RG P+ L + C+ Sbjct: 383 LGIGVGDEVLVSRRNDVIPYVEEVVEKRGPVAVPPSVCPVCSAPLVVEGEYLLCRNAACR 442 Query: 411 EQFISRLV-WLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSK 469 R+ W+ A L G+ + LT + + + + Sbjct: 443 ALIEGRIHNWIDAIGALE---WGDKLIEQVVAAGLVREPLDLYKLTVKSIADLDRRGEKS 499 Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIP----LTRAALNASDERSWSQLLFSTEQFWQQLPG 525 + + Q ++ A+GI T L ++ + +LL + E +PG Sbjct: 500 ATKCLEQLKSRLPLALPVFLAALGIEGFAIQTARLLVSAGYTTIEKLLAAGEDELAGIPG 559 Query: 526 TGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 G+ +A ++ + L A I P Sbjct: 560 LGAIKAASIVRGLRARSDE--IGRLLAAGIVPVAP 592 >UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNLJ_TREDE Length = 645 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 98/543 (18%), Positives = 208/543 (38%), Gaps = 46/543 (8%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN-G 89 ++ I L++ IK+ D Y+ + E+ D +D L L + Sbjct: 4 EKRILDLEKTIKKHQDLYYN-AQPEISDAEFDALWDELKALDPQNKLFFTVPLESTEGFA 62 Query: 90 AVMHPVAHTGVRKMVDKNALSLWMRERS--DLWVQPKVDGVAVTLVYRDGKLNKAISRGN 147 H + K D + W + + VQ K+DG ++ L Y +G +A++RG+ Sbjct: 63 KSEHIIPMGSQEKAADPPSFEAWALKMPFKEYIVQYKMDGASLELQYEEGHFVRAVTRGD 122 Query: 148 GLKGEDWTQKVSLISAVPQTVSGPLANST--------LQGEIFLQREGHIQQQMGGINAR 199 G G+D T+ V + + + ++ + ++ E+ + R H + N R Sbjct: 123 GKIGDDITENVLKMKGLIKDITVNAGPAYGTKPFSGGIRCEVIMLRSIHQKYFKDKANCR 182 Query: 200 AKVAGLMMRQDDSDTLNSLGVFVWAWPDGP-----------QLMSDRLKELATAGFTLTQ 248 GLM ++ + + L +F + G + S++L L AGF + Sbjct: 183 NAANGLMKKK-NGELCEHLNLFAYDAVQGSIGRPFTGDAPFKTESEKLVWLKKAGFNCVE 241 Query: 249 TYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQ 306 + K+ EV R + L + DG+V++ + + E +A+K+ Sbjct: 242 --VKYCKSIAEVIEYRAHVMDIRPSLDYDIDGLVIK-NDTIDPEDMKRARPEKQIAFKFS 298 Query: 307 PVAQVAEVKAIQFAVGKSG-KISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQI 365 V +K I+++ +SG + +A + PV L V+R ++ + + ++ G ++ Sbjct: 299 LEEAVTVLKEIEWS--ESGATYTPIALIEPVRLAGTTVKRASLANPNIIKALNLKIGSRV 356 Query: 366 LVSLAGQGIPRIDDVVWRGAERTKPTPPENR--------FNSLTCYFASDVCQEQFISRL 417 +V+ G+ IP+I+ + + P+ Y + C + R+ Sbjct: 357 VVTKRGEIIPKIEALAENPPNVKEIEYPDTCSVCGSPLTNEGTRLYCPNMSCPKLIHHRI 416 Query: 418 VWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQF 477 + VL + G + L + R I LT E+L + K + +++ Sbjct: 417 EKWIS--VLDIRDFGITLIKRLFEMGRVNSITDLYTLTVEELAAIDRMGKLSAEKVYKAL 474 Query: 478 NLARKQPFTRWVMAMGIPLTR----AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQ 533 + ++ T ++ I L + ++LL ++E + + G + Sbjct: 475 HSKKEISLTEFIAGFDIEGIGETMVEKLEEAGFNDLNELLGASEADFANVYQFGQVLSHT 534 Query: 534 VIE 536 ++ Sbjct: 535 LVT 537 >UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MVF8_9CHLO Length = 887 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 121/710 (17%), Positives = 203/710 (28%), Gaps = 172/710 (24%) Query: 16 SSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 + WA A + ++ L + I + D+ Y + D YD RL + Sbjct: 70 AQAWAS--ALPASEVPAAMASLAEFISRADEAYHNDADPVASDAAYDATRLRLEALEALH 127 Query: 76 GSEPRDVMMPPLNGA----------VMHPVAHTGVRKMVDKNALSLWMRERSD------- 118 + R+ GA V H V + D + + ++ + Sbjct: 128 PAMIREDSPIGAVGAKPAAWSALPQVEHAVPMRSLGNCFDDDDVRAFVARVTRALGPPER 187 Query: 119 ----------LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV 168 +PK+DG + +L Y DG L A SRG+G GED T+++ I P T+ Sbjct: 188 FDDDARAPLRFCAEPKIDGASASLRYVDGVLVVAASRGDGEVGEDVTRQIGGIPGAPTTL 247 Query: 169 SGPLAN----STLQGEIFLQREGHIQQQM--------GGINARAKVAGLMMRQDDS---- 212 +G + ++GE+F+ + +AR AG M R + Sbjct: 248 TGRAGDWPATLEIRGEVFIADDDFAALNARREARGMPTFKSARNAAAGAMRRLEPPSRDG 307 Query: 213 -DTLNSLGVFVWAWPDGP--------QLMSDRLKELATAGFTLTQTYTRAVKNADEVA-- 261 D L + W + L L G + T + + Sbjct: 308 ADAGRYLRFLAYGWGEVKPQTELLPWSSQRAFLASLPALGLSPVPTLGPITDDVAALVAG 367 Query: 262 -RVRNEWWKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQ 318 E +A L + DGVV + R W A K+ V ++A+ Sbjct: 368 SHAALERDRASLGYRVDGVVYKVDDVASQRILGADSRAPRWATAHKFAAETAVTTLRAVD 427 Query: 319 FAVGKSGKISVVASLAP-VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 VG++G ++ VA+L P V L V R + + + G +++V AG IPR+ Sbjct: 428 VQVGRTGALTPVATLDPPVALGGATVTRATLHNFEDVARKGLRLGARVVVERAGDVIPRV 487 Query: 378 DDVVWRGAER------TKPTPPENRFNSLTCYFASDVC---------------------- 409 VV G E P S T AS C Sbjct: 488 VRVVAEGEEEGAVVATPTRCPACGSAVSKTPLAASVKCPKKRLSSPYESGDAASSSFAAV 547 Query: 410 -----------------------------QEQFISRLVWLGAKQVLGLDGIGEAGWRALH 440 Q + R+ ++ L + G+ L Sbjct: 548 DDESEDATSSPSSSSSSAAVLRCTGGWRCPAQALERVAHFASRDALDVRGLARKQIADLL 607 Query: 441 QTHRFEHIFSWLLLTP--EQL------------------------------QNTPGIAKS 468 + E L G K Sbjct: 608 DAGVIASPADLFTMRARFEHLGVDPDASGEDDDARGDGGGVAVPEFWTYASGKDEGKLKR 667 Query: 469 KSAQLWHQF-NLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLL----------- 513 + +L+ A P R++ ++GIP A L + R+ Sbjct: 668 SAKKLFDALDETAAGVPLHRFIYSLGIPQVGLTTAKLLSRKYRTLDAFRDAAEEAAAAKA 727 Query: 514 --------FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + + G G A + E+ + + + Sbjct: 728 AASADAAASTEAPAMTDIDGIGPVVAATIGEFWSERANVNVVDDMLRNGV 777 >UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ_BIFLI Length = 921 Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 96/485 (19%), Positives = 178/485 (36%), Gaps = 69/485 (14%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------ 77 + A +R+ ++ Y+ + D YD L + + F S Sbjct: 56 TMTAEAAARLWARVAAWVESDQIAYYIDDSPVSSDAAYDARMRCLERLEAAFPSLDNPQS 115 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR-----------ERSDLWVQPK 124 V N +V HP + + L W + + + K Sbjct: 116 PTHRVGGSFSNDFVSVRHPSRMMSLDDVFSIEELKDWYDSVIRDLDWPESKPLPMSCEVK 175 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS----TLQGE 180 +DG+A+ L+YR+G L + ++RG+G+ GED T V I ++P + GP + ++GE Sbjct: 176 IDGLALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTIGSIPANLGGPKEDVPDFVEIRGE 235 Query: 181 IFLQREGH----IQQQMGG----INARAKVAGLMMRQDDSDTL-NSLGVFVWAWP----- 226 +F++ + +Q+ G N R AG + ++D T L + Sbjct: 236 VFMRWDDFHTLNNEQEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGLGQLTWG 295 Query: 227 --------DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVT 276 D S G ++ + RAV + E+ + + + ++ Sbjct: 296 ADHPRGTHDVVADQSQAYDLYTRWGVPVSP-HNRAVTSFQEILDMIEYYGEHRGDIEHAL 354 Query: 277 DGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DG+VV+ R W +A+KY P E+ I VG++G+++ VA L Sbjct: 355 DGIVVKVDDLGLQRTLGATSRAPRWAIAYKYPPEEVNTELLNITVQVGRTGRVTPVAVLK 414 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK----- 389 PV + V R + + + + GD ++V AG IP + V + + Sbjct: 415 PVYVAGSTVARTTLHNGFEVKRKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREDQLRE 474 Query: 390 -------------PTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 P + + C + C Q R++ L +++ ++ +GE Sbjct: 475 FVMPEFCPSCGAKLAPAKEGDKDIRCPNV-ESCPAQLTERVISLASRKAFDIEHLGEQSA 533 Query: 437 RALHQ 441 AL Sbjct: 534 IALTN 538 Score = 72.2 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPL---TRAALNASDERSWSQLLFSTEQFWQQLPG 525 + +++ + + AR R ++A+ I A L AS S + + +T + + G Sbjct: 736 NTRKMFDEMDKARHADLWRVLVALSIRRLGPPTARLIASAMGSLAAIEKATIEDLTAIDG 795 Query: 526 TGSGRARQVIEWKENAQIKKLGSWLAA 552 G A V+ W A ++ G W A Sbjct: 796 VGPEIAESVVNWF--AATREPGDWRGA 820 >UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS Length = 823 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 109/542 (20%), Positives = 208/542 (38%), Gaps = 43/542 (7%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR-DVMMPPLN 88 AQ + L++ I D Y+ +S++ D +D L L + Sbjct: 4 AQRRVQELEKLILHHQDRYYN-AESDISDDAFDALWEELARLDPGNPLLKAIGSDSQRDA 62 Query: 89 GAVMHPVAHTGVRKMVDKNALSLWMRER--SDLWVQPKVDGVAVTLVYRDGKLNKAISRG 146 H V K D+ + S W ++ VQ K+DGV++ L Y G A++RG Sbjct: 63 VKKRHIVPMGSQHKAADEESFSAWAKKNALQAFLVQHKLDGVSLELQYERGHFCCALTRG 122 Query: 147 NGLKGEDWTQKVSLISAVPQTVS---GPLANST----LQGEIFLQREGHIQQQMGGINAR 199 NG+ G+D T V + T++ GP N ++GE+ + ++ H N R Sbjct: 123 NGIVGDDVTANVRGMRGFVPTLTAEWGPCGNLPFTGGVRGEVIMHKDIHRSHYPTHANCR 182 Query: 200 AKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLM----------SDRLKELATAGFTLTQT 249 V G++ R+D + V A P P +++L LA GF Sbjct: 183 NTVNGILKRKDGRGRTHLHIVCYDAVPGTPGKPFTGSLPFADETEKLAWLARQGFVTV-- 240 Query: 250 YTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQP 307 ++ NA EV +R+E + LP+ DG+VV++ LP + +A+K+ Sbjct: 241 HSHRCANAQEVVALRSEIMRTRELLPYSIDGLVVKSTDLDFQDAQLPR-PKKQIAFKFST 299 Query: 308 VAQVAEVKAIQFAVGKSG-KISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQIL 366 + ++ +Q+ SG + + PV L V+R N+ + + + G +L Sbjct: 300 QEAITTLRDVQWQT--SGVTYTPIGITDPVRLAGTTVKRANLCNPNMLTKLCLKIGSHVL 357 Query: 367 VSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS--------LTCYFASDVCQEQFISRLV 418 +S G+ IP+I+ +V A + P + + + C R+ Sbjct: 358 ISKRGEIIPKIEALVSTPAHAQEIHIPTQCTSCNTVLENSGSRLFCPNVNCPLLSHHRIT 417 Query: 419 WLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFN 478 + L + +G + L + + I LT E L + + + ++ + Sbjct: 418 RWI--ECLEIKHVGTELIQRLFEEKKVRRIPDLYTLTCEDLIEIEHVGNATAKKILEAIH 475 Query: 479 LARKQPFTRWVMAMGIPLTRAALNASD----ERSWSQLLFSTEQFWQQLPGTGSGRARQV 534 ++ ++ GI + + ++L +T + + + G+ A+ V Sbjct: 476 HKKEIALQTFIAGFGIEGIGETMGEKLICAGFDTLEKVLHATTETLESIYQFGTELAKSV 535 Query: 535 IE 536 + Sbjct: 536 VT 537 >UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI82_9DELT Length = 706 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 117/572 (20%), Positives = 209/572 (36%), Gaps = 58/572 (10%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------------------ 76 L I++ + +YW + D VYD+L L + Sbjct: 33 DTLAALIRRTNHEYWNLHAPTIPDPVYDRLVEGLRRLDPAHPVLDELGEATPEGPVIEAD 92 Query: 77 SEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRE-RSDLWVQPKVDGVAVTLVYR 135 + L V H A + K L W + ++ V PK+DGVA +L Y Sbjct: 93 ATASIPPAERLGAPVRHTRAMLSLDKCYGPEDLYSWTEKFEGEVLVMPKMDGVACSLRYD 152 Query: 136 -DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-----------GPLANSTLQGEIFL 183 +GKL A +RGNG +GED T V + VPQ + G ++GE+F+ Sbjct: 153 AEGKLFLAATRGNGSEGEDITVNVLEVEDVPQQLDPAAFAELPGPDGAAPAVEVRGELFM 212 Query: 184 QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLMSDRLKE--LA 240 + + + N R AG + ++ T L + + G +L ++R K L Sbjct: 213 KLSVFERYKEQYSNPRNLTAGAIKHKERGKTKAYTLSFYAYDL-QGTELPTEREKFASLR 271 Query: 241 TAGFTLTQ-TYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR--HWLPGQA 297 GF + + + + R E+ + DGVV RA++ E R Sbjct: 272 ALGFAVEECDFVPRGELQAAYERWSARRSADEIDYEIDGVVYRASEVAEQRRMGETGHHP 331 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 W +A+K+Q ++ + ++V ++G I+ VA P+ L + R + ++ + E Sbjct: 332 RWSMAYKFQGDTGTTTLEEVLWSVSRTGTITPVAIFKPIELSGAMIARAGLFNLNHFDEL 391 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS------------LTCYFA 405 + G I V+ G IP ++ VV GAE P+ Y + Sbjct: 392 GLTAGAAIEVTRRGGVIPYVERVVTPGAEGETFDIPKRCPACNSEAVRRKKRDGEFLYCS 451 Query: 406 SDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 C + L +V+ + G G + L E L+ Sbjct: 452 KPEGCGSARLGELQHFA--KVVDIQGFGPKVVTQAVDAGLLSSPADFYTLRVEDLEEFDR 509 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 + + + L Q + R+ ++ ++GI A L A++ R+ + + + + Sbjct: 510 LGRRSAENLVAQVDAHRRIELPIFLQSLGIDHLGKQNAVLLANEFRTLAGVRGVSREALL 569 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 ++ G A ++ E +L L Sbjct: 570 EVKGIKDAIADALLAGLETR--AELIDALLEH 599 >UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBA4_9BACT Length = 626 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 122/531 (22%), Positives = 216/531 (40%), Gaps = 63/531 (11%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPL--NGAVM 92 L + I+ + YW EG+ E+ D YD+L L + + R V P + +G V Sbjct: 14 DELIRLIEYHNRRYWDEGEPEIPDARYDELIRALQKLEPDHELVTR-VYAPAVAGSGKVR 72 Query: 93 HPVAHTGVRKMVDKNALSLWMR-----ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGN 147 H + K + W + E +L V+PK DG++ DG++ +RG+ Sbjct: 73 HLRPMLSLDKAYSLEEVLEWAKKFARSEDEELLVEPKYDGISANF---DGRV--LSTRGD 127 Query: 148 GLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG------HIQQQMGGI--NAR 199 G GE+ T K+ L+ +G + + ++GE+ ++ + HI+++ GG+ N+R Sbjct: 128 GELGENITDKLPLVELETAGHTGKV-DRPVRGELVIRDDDFKTLYSHIRKKGGGVYKNSR 186 Query: 200 AKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQ-TYTRAVKNAD 258 VAG+M G + +++ EL A TL Sbjct: 187 NAVAGIM---------------------GLKEIAEM--ELQGAKITLVDYNLVSFRVKYS 223 Query: 259 EVARVRNEWWK--AELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEV 314 E+A E + LP+ DG+V++ A S +A+K+ + + + Sbjct: 224 ELAAKWEELRRQLEALPYPQDGIVIKLADSAYSASLGNTAHHPRGEIAFKFTNIRRETRL 283 Query: 315 KAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGI 374 ++++ GK+ ++ VA L PV + ++R + +++ E + GD + V AG I Sbjct: 284 IGVEWSFGKNC-LTPVAELEPVEISGTTIRRATLHNIQNILELGVQIGDTVTVERAGDVI 342 Query: 375 PRIDDVVWRGAERTKP---TPPENRFNSLTC----YFASDVCQEQFISRLVWLGAKQVLG 427 P I G ER P P + + C E + RL A + LG Sbjct: 343 PYIVSSTP-GEERRSPLIEDCPSCGAKLVRRGPELCCPNPECPETQLQRLA--AAVRNLG 399 Query: 428 LDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTR 487 ++ +GE R L + H+ LT L G A +A L + AR + Sbjct: 400 IERLGEPTLRKLMENSGVRHLGDLFELTAMDLLRLDGFAAKSAANLIEEIQKARIVNDYQ 459 Query: 488 WVMAMGIPLTRAALNASDERS--WSQLLFSTEQFWQQLPGTGSGRARQVIE 536 + A+ IP A + ++ L +E+ +PG G RA+ ++ Sbjct: 460 LLAALNIPNIGANVAKVIFSHTDFAGLRRMSEEELSAIPGIGPERAKALVS 510 >UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID=C4ZCZ5_EUBR3 Length = 656 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 93/577 (16%), Positives = 193/577 (33%), Gaps = 51/577 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR-----CFGSEP 79 + +++I L + + + Y+ + + +D + LTQ ++ S Sbjct: 1 MENNKIKDKIDELVESLNRASKAYYNGADEIMPNYEWDAMFDELTQLEKETGYIRHDSPT 60 Query: 80 RDVMMPPLNGA-VMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGK 138 ++ G H + K L W + +W+ K+DG+ + L Y G+ Sbjct: 61 QNAGYEAEAGNREPHEYPALSLAKTKSIEELKKWAGDMP-IWLSWKLDGLTLVLTYDGGR 119 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH-------IQQ 191 L K ++RGNG G + T IS P+ + + ++GE + Sbjct: 120 LVKILTRGNGTVGSNITFLQDAISGFPKEIPYK-GHMVVRGEATISYTDFKLLNDTIEDD 178 Query: 192 QMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAW-----PDGPQLMSDRLKELATAGFTL 246 N R +G + DD + + V +A+ D DR+ L+ F + Sbjct: 179 DEKYANPRNLASGTLN-LDDVEEVKRRHVVFYAFTLVHIDDDIISWGDRMSYLSDMKFNV 237 Query: 247 TQTYTRAVKNADE-VARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLP---GQAEWLVA 302 + DE V R + + DG+V+ + A Sbjct: 238 VKREATDAAGLDEAVKRWTRDVESGRMDVPVDGLVICYDDTAYAAGGSVTGHHATRAGFA 297 Query: 303 WKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPG 362 +K+Q A ++ I+++ S IS VA PV ++ V R ++ ++ + + Sbjct: 298 FKWQDEAVDTRLRYIEWSCAVS-TISPVAVFEPVQIEGTTVSRASLCNLTEIERLGVGKE 356 Query: 363 DQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCY-----------FASDVCQE 411 + V A + IP+ V E P + + + C Sbjct: 357 CTLSVIKANKIIPKCIAVKDAVGEVEIPKECPVCHHPTRIFVSKNSGVKTLHCTNPDCTA 416 Query: 412 QFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTPGIAKSK 469 + + + +K + +DG+ + L +++ + G + Sbjct: 417 KNVKKFSRFVSKSGMDIDGLSVQTMLKFINEGFIKQFPDIYHLPEHFDKISSMEGFGEKS 476 Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSW------SQLLFSTEQFWQQL 523 + +R + A+ IPL + ++ +T + + Sbjct: 477 CMNMQTAIEKSRHVHPVNLIFALCIPLIGTDAGKKIVNAIGFDGFADRMRNAT--DFVDI 534 Query: 524 PGTGSGRARQVIEWKENAQI----KKLGSWLAAQQIT 556 G G ++ ++EW N Q + L L +++ Sbjct: 535 DGIGQEKSGSILEWYANPQNSTMFEALIKELDIEKVD 571 >UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WS37_9ACTO Length = 799 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 100/463 (21%), Positives = 174/463 (37%), Gaps = 52/463 (11%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 A+E + + + Y + V D YD+L L + + S + V Sbjct: 13 DARERWNEIAPLVSSAQRAYHSGDEPIVTDEHYDRLVRELRRLEAEHPELAVDSSPAQSV 72 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD---LWVQPKVDGVAVTLVYRDG 137 P G V H ++ + + L W + + K+DG+AV L Y G Sbjct: 73 GAPAAAGFENVAHLERLYSLQDVFTLDDLKEWYEGTAGAARCTAEVKIDGLAVNLRYVGG 132 Query: 138 KLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS-TLQGEIFLQREGH-----IQQ 191 +L +RG+G+ GED T V IS+VPQ++ G + ++GE+F+ Q+ Sbjct: 133 ELVVGATRGDGVTGEDVTANVRTISSVPQSLRGDFPDVVEIRGEVFIPLAKFDSFNARQR 192 Query: 192 QMG---GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP----------DGPQLMSDRLK 237 G N R AG + ++D L + + Sbjct: 193 AAGLKEFANPRNAAAGSLRQKDPKVAAERPLDFIAHGAGRIDGTSSAVDEKLASQKGLYE 252 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWL 293 G ++ Y R V + D+V E+ +++L DG V + E Sbjct: 253 LFQEWGVPVSP-YVRLVSSWDDVEGFVREYADLRSDLIHGIDGAVFKIDSRAEQEDLGAT 311 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W VA+KY P + I+ VG++G+++ A + PV + V + + + Sbjct: 312 SRVPRWAVAYKYPPEEVETRLLDIKVQVGRTGRVTPFAVMKPVTVAGSTVAQATLHNPSE 371 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVV---WRGAER------------TKPTPPENRFN 398 + GD ++V AG IP + V G+ER T+ P ++ Sbjct: 372 VARKGVLIGDVVVVRKAGDVIPEVLGPVSALRDGSEREWTMPSACPSCGTELAPAKDGDV 431 Query: 399 SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 + C A C Q R+ ++G++ L ++ +GE L Sbjct: 432 DIRCPNA-RSCPAQLAERVAYIGSRAALDVEALGEETSLWLTD 473 Score = 72.6 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 3/93 (3%) Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLP 524 + + AR + R ++A+ I A AS S S ++ + Q+ Sbjct: 610 KMIELVVAELQAARTKELWRKIVALSIRHVGPTAAKAIASSFGSLSAAREASVEEMAQID 669 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 G G A+ ++W + ++ A + Sbjct: 670 GVGRVIAQSFLDWFDVPWHTEIVEAWEAAGVVF 702 >UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRA8_9ACTO Length = 799 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 103/487 (21%), Positives = 174/487 (35%), Gaps = 74/487 (15%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSE-----VEDGVYDQLSARLTQWQRCFGSE-PR 80 P A + + L QI+ DY+ + E + D YD L +L + + Sbjct: 9 PESALAQHADLVDQIEAARTDYYDQ-TPETGVTRLSDAEYDALFVQLQLLEAAYPDLVTP 67 Query: 81 DVMMPPLNGAVM-----------HPVAHTGVRKMVDKNALSLWMR------ERSDLWV-- 121 D + G+ H + + + W E D V Sbjct: 68 DSPTQTVGGSGETANTEGFPPHHHLCQMGSIDDVFSYAEVDAWWARVEKSLEGQDFSVSA 127 Query: 122 QPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQG 179 + KVDG+A++L Y G L +RG+G GED T+ V I+ VP +SG ++G Sbjct: 128 EVKVDGLAMSLTYLHGTLAVGATRGDGFTGEDVTENVKTIATVPVRLSGENVPELVEIRG 187 Query: 180 EIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNSLGVFV--------W 223 E++L N R G + ++D F+ W Sbjct: 188 EVYLPLADFAAMNAARERDGEKLFANPRNAATGSLKQKDPVQAAKRPLAFLAHGVGKVRW 247 Query: 224 AWPDGP---QLMSDRLKELATAGFTLTQT-------YTRAVKNADEVARVRNEW--WKAE 271 A P + D + L + G + + + E+ V ++ + + Sbjct: 248 ADPGAAAHLETQEDFYELLESWGLHSVRETPASLGLSLAGIHSLAEIHTVLDQMTAHRHD 307 Query: 272 LPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISV 329 DGVV++ + W A+K+ P + I+ VG++G+++ Sbjct: 308 FAHQIDGVVLKVDSFAQRDALGSTARAPRWACAYKFPPEEVHTRLLGIEVQVGRTGRVTP 367 Query: 330 VASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK 389 + V++D V R + + + D+ PGD +++ AG IP I V Sbjct: 368 FGVMERVLVDGSYVSRATLHNAKEVARKDVRPGDTVVLRKAGDIIPEILGPVMSLRTAGL 427 Query: 390 P------TPPENRFN---------SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEA 434 P T P L C S C Q RL+ +G++ L ++G+GE Sbjct: 428 PEWVMPDTCPSCGTELGAQKEGDIDLRCPNQSG-CPAQITERLIHVGSRNALDIEGLGEE 486 Query: 435 GWRALHQ 441 G AL Q Sbjct: 487 GALALTQ 493 Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 7/108 (6%) Query: 455 TPEQLQNTPGIA----KSKSAQLWHQFNLARKQPFTRWVMAMGIPL---TRAALNASDER 507 Q + Q A+ + R ++A+ I A A Sbjct: 590 KAAQEATGQRFGPPVAGKVVQTFFEQLQAAKSKELWRVLVALSIRHLGPVAARTIARQFV 649 Query: 508 SWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + S L ++ + + G G A + +W +++ A + Sbjct: 650 TMSALRVASAEQLGEAEGIGEVIAASIRDWFTVPWHQEIVDAWEAAGV 697 >UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris RepID=C2KQS7_9ACTO Length = 917 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 109/534 (20%), Positives = 177/534 (33%), Gaps = 122/534 (22%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSE------VEDGVYDQLSARLTQWQRCFG---- 76 P + Q E L QI+ DY+ + + D YD L RL + + Sbjct: 8 PPQIQNEHQELVAQIEAARADYY--DNPDEHGVTRLSDADYDALFVRLQLLEGSYPALVT 65 Query: 77 --SEPRDVMMP----------------------PLNGAV-----------MHPVAHTGVR 101 S + V AV H + Sbjct: 66 PDSPTQTVGGGAGGGGGVKRAAAATTEAVGAAHVPENAVAVATTEGFPPHTHAKRMQSID 125 Query: 102 KMVDKNALSLWMRERS--------DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGED 153 + + W + + KVDG+A++L Y DG+L +RG+G GED Sbjct: 126 DVFSTAEVDAWWERVEKGLEGKPFTVSAEVKVDGLAMSLTYVDGQLMTGATRGDGRVGED 185 Query: 154 WTQKVSLISAVPQTVSGPLAN--STLQGEIFLQREGHIQQQMG----------------- 194 T V I VPQT+ G + ++GE++L E Q Sbjct: 186 VTANVRTIKTVPQTLGGTVIPHLVEIRGEVYLPLEDFAQMNAEREANNAAWEAARAAGDK 245 Query: 195 -----------GINARAKVAGLMMRQDDSDTLNSLGVF-------VWAWPDG---PQLMS 233 N R G + ++D + F V WPDG Sbjct: 246 EKLKTLKKMPLFANPRNAATGSLKQKDSIEAAKRPLAFLAHGLGAVQGWPDGVSPMATQE 305 Query: 234 DRLKELATAGFT----LTQTYTRAVKNADEVARVR-----NEWWKAELPFVTDGVVVRAA 284 D ++L G Q+ + + +V + + DGVV++ Sbjct: 306 DFYRQLEVWGIPSVRRTPQSLGLRMAGLTTLTQVHAVLAAMTEHRHDFSHQIDGVVLKVD 365 Query: 285 KEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 W A+K+ P + I+ VG++G+++ A + V++D Sbjct: 366 NLAARVLLGSTARAPRWACAYKFPPEEVHTRLLGIEVQVGRTGRVTPFAVMERVLVDGSY 425 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS- 399 V R + + + D+ PGD +++ AG IP + V R + PE + Sbjct: 426 VSRATLHNAKEVARKDVRPGDTVVLRKAGDIIPEVLGPVLSLRPGGLPEWVMPEMCPSCG 485 Query: 400 ------------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 L C + C Q RL+ +GA+ L ++G+GE G AL Q Sbjct: 486 TRLGQEKEGDIDLRCPNQAG-CPAQITERLIHVGARGALDIEGLGEEGALALTQ 538 Score = 70.6 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 3/91 (3%) Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPL---TRAALNASDERSWSQLLFSTEQFWQQLP 524 ++Q AR + R ++A+ I A A + + + + + Q+ Sbjct: 655 KTVETFFNQLAAARSKETWRVLVALSIRHLGPVAARAVARRFPTLAAVAAADVEGLSQVE 714 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 G G+ A V++W +++ + Sbjct: 715 GVGAVIAASVVDWFRVPWHQEIVLAWTQAGL 745 >UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudomonas phage EL RepID=Q2Z0V9_9CAUD Length = 656 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 117/586 (19%), Positives = 215/586 (36%), Gaps = 78/586 (13%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQW-------QRCFGSEPRDVMM 84 E I L +Q+ Y+ E ++E+ D YD L L + F R V + Sbjct: 8 ERIKYLHEQLTYHAHLYFVENRNEISDEAYDVLEQELNELYDRYPEIAAKFDFYNRPVPI 67 Query: 85 PPLNGAVMHPV----AHTGVRKMVDKNALSLWMRERSD---LWVQPKVDGVAVTLVYRDG 137 +G + PV ++K + ++ + D + + K+DG+A+ LVY G Sbjct: 68 HEPSGETIQPVRFEEPMLSLKKALSVEEADTFLLKFPDGTNFFYEEKLDGLALELVYEQG 127 Query: 138 KLNKAISRGNGLKGEDWTQKV---------SLISAVPQTVSGPLANSTLQGEIFLQREGH 188 +L +RG+GL GED T + + +P ++GE ++ E Sbjct: 128 QLVSMSTRGSGLVGEDVTHSIVLFDEATLPRTLRTLPDRHKPQGDRLVIRGEGYISLERF 187 Query: 189 IQQQMGG---INARAKVAGLMM---RQDDSDTLNSLGVFVWAWPD--GPQLMSDRLKELA 240 G N R V+G + + D +L + D G + S+ + L Sbjct: 188 DSLNETGGKRSNPRNAVSGWVRSLPQNQREDIRGTLYFAAYYASDRLGTKAYSELRQVLL 247 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR--HWLPGQAE 298 GF + ++ + + +R DG+V++ K E Sbjct: 248 GLGFGVPESRDWIAVSENRRGNIR----------PVDGIVIKVDKFKEQDASGNGSKFPH 297 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W +A+K+ +A+V+ + + G++ V PV + Q ++ + + + Sbjct: 298 WAIAYKFPAEEALAQVEGCIWNTSRFGRVVPVVQYTPVTIQGVICQSASLDNYGSFMDLG 357 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGA----ERTKPTPPENRF---------NSLTCYFA 405 ++ GD+I+++ IPR++ V G E P + + L C Sbjct: 358 LSIGDRIVITRNNDVIPRLNRVEECGEGDLLEAPTSCPSCDSLLEVVVGRDSSELVCNNV 417 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL----TPEQLQN 461 ++ C Q + R V K L +DG+G L + + L L + L Sbjct: 418 AE-CPAQIVMRCVTTFDKFGLDVDGLGPVKVSELVEKGWVKQPADILTLPEGIKDQCLTP 476 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP-----LTRAALNASDERSWSQLLFST 516 T ++ + P R++ A+GIP L + NA E + L + Sbjct: 477 TTRRGL---ERVLQE-----PVPLHRFLKALGIPDIGITLAKRLANAIPEGKIEESL-TN 527 Query: 517 EQFWQQLPGTGSGRARQVIEWKENA---QIKKLGSWLAAQQITGFE 559 +F Q + G G A +V+ ++ L Q TG + Sbjct: 528 PKFLQSVRGVSVGIAYRVVNAFDSPVFKDNFHALKGLLTLQYTGTQ 573 >UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GA45_PHATR Length = 864 Score = 350 bits (898), Expect = 1e-94, Method: Composition-based stats. Identities = 116/682 (17%), Positives = 213/682 (31%), Gaps = 166/682 (24%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVE------------DG------VYDQLSARLTQWQR 73 EE+ RL +++ D Y+ +SE+ D Y Sbjct: 104 EELVRLASDLRRHDALYY---ESEMARNSVGRIPPCSNDSNVRVAWAYKP--RGTEDASE 158 Query: 74 CFGSEPRDVMMPPLNGAVM------HPVAHTGVRKMVDKNALSLWMRE------------ 115 F PR V+ H + + + L W+ Sbjct: 159 TFFCRPRRPTPNDATRIVVDRVKRPHVRPMLSLDNVHREEELLAWLERIRKKLTVDDGPS 218 Query: 116 RSDLWVQPKVDGVAVTLVYRDGK-------LNKAISRGNGLKGEDWTQKVSLISAVPQTV 168 + +PK+DG++++ Y + A +RG+G +G+D T V + VP T+ Sbjct: 219 SLTILTEPKLDGLSLSCRYEQRQSNTTLYTFVWASTRGDGKQGQDVTHAVQQGNLVPLTL 278 Query: 169 S-----------GPLANSTLQGEIFLQREGHIQQQ---MGGINARAKVAGLMMRQD---D 211 ++GEI L + + NAR +G+++R++ D Sbjct: 279 DWASLVADPESYTHPKVLEIRGEIVLPTTVFQSLEGEGLAFANARNAASGILLRKESITD 338 Query: 212 SDTLNSLG--VFVWAWP----DGPQLMSDRLKE-LATAGFTLTQTYT-----------RA 253 +L + +A+ DG + +L+ L T GF + + Sbjct: 339 PVASQALREKLCFYAYDVAGDDGFTVSGVQLRRVLPTLGFRVPEPVAVTRLRLNNTTAWN 398 Query: 254 VKNADEVARVRNEWWKAEL---------PFVTDGVVVRAAKEPES--RHWLPGQAEWLVA 302 V + + + + + DG V + ++ W +A Sbjct: 399 VNDIQALLKYHHSMQHHRQGKKTSQTYGDYDMDGAVHKVSESDLRIILGQSNRAPRWAIA 458 Query: 303 WKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE-WD--- 358 K+ P+A V + I VG++G ++ VA L PV L V+R + + Q+ Sbjct: 459 HKFAPLAAVTTLLDITVQVGRTGALTPVAILQPVELAGVVVRRATLHNFAHMQQVLGSTT 518 Query: 359 -IAPGDQILVSLAGQGIPRID--------------DVVWRGAERTKPTP----------- 392 IA +LV AG IP++ D + T P Sbjct: 519 TIAKESSVLVRRAGDVIPQVVQRIAGTDAGSNNGFDTISVAFPETCPACGSPVVTDEVNK 578 Query: 393 ---PENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 E L C C + + + ++ L + G+ EA L + Sbjct: 579 TASKETAGQVLRCGGPQWNCTPRAVGSIAHAVSRDALDVTGLSEARIMQLIEAGFISRPS 638 Query: 450 SWLLLTP-----EQLQNTPGIAKSKSAQLWHQFNL--ARK-QPFTRWVMAMGIPLTR--- 498 L E+L G + L A+ +R+V ++GI + Sbjct: 639 DIFALAKSPTQLEKLAEMDGWGPKSAQNL-AAVANRIAKNGISLSRFVYSLGIRFSGVHS 697 Query: 499 AALNASDERSWSQLLF-----------------STEQFWQQL----------PGTGSGRA 531 +AL A+ S L S ++ Q G G Sbjct: 698 SALIAAAYGSVEDFLKDVEAASTLPIKQVQDQESNDEQVQSFARLREETDITKGIGPVLL 757 Query: 532 RQVIEWKENAQIKKLGSWLAAQ 553 + + ++ ++ + LA+ Sbjct: 758 NSLDTFAQDQELVEAAESLASS 779 >UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J8R2_ACIF2 Length = 609 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 95/553 (17%), Positives = 181/553 (32%), Gaps = 75/553 (13%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLNG 89 L ++++ + Y + G + D YD L RL + Q EP ++ Sbjct: 2 SLVHKLEEANAAY-RAGAPIMSDAEYDALVERLRREQPDHPYLQTVEPEPENIFG---GA 57 Query: 90 AVMHPVAHTGVRKMVDKNALSLWMRERSD-----------LWVQPKVDGVAVTLVYRDGK 138 V H K ++ L + + + K+DG+A + G Sbjct: 58 KVRHHAPMLSTEKAYTESDLIRYFSAVTRQAARLGMDEVIYAMTAKLDGLAGSRDRAHG- 116 Query: 139 LNKAISRGNGLKGEDW-TQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ--QMGG 195 +RGNGL+GED + V V GP GEI + ++ + +G Sbjct: 117 -VDLATRGNGLQGEDIGKAFARGLKIVGADVDGP-------GEIVMPKDFFEEHLVPLGF 168 Query: 196 INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK 255 + R + G + D + +KE A F R Sbjct: 169 KHPRNFMVG------------------FVGADTEKDHHRLVKESGMAHFVPYANLPRFYA 210 Query: 256 NADEVAR---VRNEWWKAELPFVTDGVVVRAAK--EPESRHWLPGQAEWLVAWKYQPVAQ 310 + D + R +E + P+ TDG+V+ + + W +A+K + Sbjct: 211 DKDTILRDIAYISEDIRKNTPYDTDGIVIEVEEPELRAALGSTNHHHRWQIAYKTKGETA 270 Query: 311 VAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLA 370 V + + G++G+I+ V + PV L ++R + ++ ++ + G ++ + + Sbjct: 271 ETTVTGVVWQTGRTGRITPVIEIDPVELSGATIRRATAHNFQKARKDGLGVGSRVTMIRS 330 Query: 371 GQGIPRIDDVVWRGAERTKPTPPENRF----NSLTCYFASDVCQEQFISRLVWLGAKQVL 426 G+ IP I DV+ P + + C+ Q + +++ Sbjct: 331 GEVIPFIMDVLSPAPLDVPTACPCCNGPVEEDGEYLTCVNPHCEAQAEGAISHFF--KIM 388 Query: 427 GL-DGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPF 485 G DG G + I + L +T + G ++ L + P Sbjct: 389 GTADGFGPKAVEKIVAAG-ITDILAVLDMTRADFEGM-GFGPGQAENLEREMKRCMSTPV 446 Query: 486 --TRWVMAMGIPLTRAALNASDE---RSWSQLLFSTEQFWQQLPGTGSGRARQVIE---- 536 R++ A GI + + L T + G A + Sbjct: 447 EDWRFLAAFGIRYLGRGDSKALLCAIGGLDALNGITPAQIMAIDGFAEKTALCIAHDLTW 506 Query: 537 -WKENAQIKKLGS 548 W E ++ Sbjct: 507 RWMEIEAVRDRME 519 >UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNLJ_DESAA Length = 631 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 107/525 (20%), Positives = 187/525 (35%), Gaps = 60/525 (11%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-SEPRDVMMPPLNGAVMHPV 95 L Q ++++++ Y + GK + D YD L RL + G + V HP Sbjct: 17 LGQWLEKYNEAY-RAGKPMISDAHYDLLVERLREIAPDHGFLSAVEAETFADKREVRHPA 75 Query: 96 AHTGVRKMVDKNALSLWMRERSD-----------LWVQPKVDGVAVTLVYRDGKLNKAIS 144 K DK +L ++ V PK+DG+A DG++ + Sbjct: 76 PMLSTEKAYDKQSLERFVERVYKEAAQIGVTDVLFQVTPKLDGLAAR---DDGQI--LAT 130 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG--GINARAKV 202 RGNG G D T +PQ G GEI + + Q+ + + R V Sbjct: 131 RGNGYAGYDIT-NALEKGVIPQGGRGLG-----LGEIV-AVQSYFQENLADRFEHPRNMV 183 Query: 203 AGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVAR 262 G++ SD L + + Q+ L + + + Sbjct: 184 VGII----SSDV---LNISAKQALEDKQVHFVPYATLNKW-------EGSGKELLENSEK 229 Query: 263 VRNEWWKAELPFVTDGVVVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFA 320 + + +A + DG+V + H W +A K + V V AI + Sbjct: 230 ITQDLIQAT-DYPMDGMVASVMNQDVRDHMGATSHHYRWQIAIKAKGETGVTTVNAITWQ 288 Query: 321 VGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDV 380 VG++G ++ V + P+ L ++RV + R +E G I V +G+ IP++++V Sbjct: 289 VGRTGNVTPVLEVEPLKLSGATIRRVTAHNAGRIREKGAGVGASIEVIRSGEVIPKLENV 348 Query: 381 VWRGAERTKP-------TPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGE 433 + + P TP E + L C + C+ + R+ + + D G Sbjct: 349 LTPSDDTLIPENCPVCETPLEWNNDFLKCPNLN--CKARVEQRIRHWF-RILGNADWFGI 405 Query: 434 AGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPF--TRWVMA 491 L F+ + +T E + +S L NL++ +P R++ A Sbjct: 406 KTVERLV-AGGFDSLEKIYAMTEEDFLSLE-FGPVQSKNLAEAINLSKSRPVEDWRFLAA 463 Query: 492 MGIPLTRAALNASD--ERSWSQLLFSTEQFWQQLPGTGSGRARQV 534 GI + +LL T L G G + + Sbjct: 464 FGISDLGEGDSRKILSFFPLEELLDKTRDDIVALHGFGDVTSISI 508 >UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQN7_9GAMM Length = 652 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 102/542 (18%), Positives = 183/542 (33%), Gaps = 59/542 (10%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA--- 90 + L ++ + Y + G+ V D VYD L + P + P A Sbjct: 30 VDELATACERLNASY-RAGQPLVPDAVYDHLF--IATLSEKDPEHPFLKAVEPEGEAFEG 86 Query: 91 --VMHPVAHTGVRKMVDKNALSLWMR-------------ERSDLWVQPKVDGVAVTLVYR 135 V H K ++ L ++ E + PK+DG+A + Sbjct: 87 DTVKHDTPMLSTDKAYTEDELRRFLGRVEVAAEALGIRSETLTFRMTPKLDGIA-GMQRP 145 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 DG+L +RGNG G D + P P + E+F Q E I+ G Sbjct: 146 DGRLV---TRGNGFAGADISHAFERGLRTPDGSMEPGPGELVLEEMFFQDE--IRVAFGM 200 Query: 196 INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK 255 + R VAG + +DT+ D ++ ++L + + Sbjct: 201 PHPRNFVAGFV----GADTVKPH---HQKAADAQAIIFFPYRQLPAW----QASAAVVMA 249 Query: 256 NADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAE 313 + E R E + +P+ TDGVV+ E H W VA K + Sbjct: 250 SWQE----RMEALRQAVPYRTDGVVLEVTDETVKAHMGSTSHHHRWRVALKTKGEVAHVR 305 Query: 314 VKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQG 373 V+ I+ G++G+I+ V PV+L ++ V + + + G +I +S AG Sbjct: 306 VRDIRIQTGRTGRITPVLEFDPVLLTGARISNVTAHTAANLAQQGLGVGAEIEISRAGDV 365 Query: 374 IPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQ------EQFISRLVWLGAKQVL- 426 IP+++ V+ +E T + + VC Q +RL V+ Sbjct: 366 IPKLERVLEPASEPMTVTHCPSCGHEAEVEGEYAVCPNTVGCLAQAEARLRHFF--HVMG 423 Query: 427 GLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNL--ARKQP 484 D G L + + L + G +++ L + P Sbjct: 424 NADLFGPKTVEVLVENGH-TDLRGLFDLNAVAFVSM-GFGPGQASNLVRELARCLREAVP 481 Query: 485 FTRWVMAMGIPLTRAALNASDER--SWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 R++ A+G+ + + T + + G G + + E + + Sbjct: 482 DWRFLAALGLRHLGRGDSRKLLAVYPLESITNLTAEDIAAVEGFGPITSASIAEQLQEQR 541 Query: 543 IK 544 + Sbjct: 542 ER 543 >UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate iridescent virus 6 RepID=VF205_IIV6 Length = 615 Score = 300 bits (770), Expect = 7e-80, Method: Composition-based stats. Identities = 112/525 (21%), Positives = 212/525 (40%), Gaps = 52/525 (9%) Query: 42 KQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVR 101 ++ D Y+ K + D YD L+ +L +V PL P+ + Sbjct: 26 EKADHFYFNTEKEILTDNEYDILAEQLQ---------STNVGCSPLISKTDLPLWMGSLD 76 Query: 102 KMVDKNALSLWMRER--SDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVS 159 K+ + L+LW+++ +Q K+DGV+ ++ +D KL KA +RGNG G D + + Sbjct: 77 KVYNDKELNLWIKKVASDKYIIQCKLDGVSCLIINKDNKL-KAYTRGNGKVGTDISHLIK 135 Query: 160 L-ISA--VPQTVSGPLANSTLQGEIFLQREGHIQQQM-GGINARAKVAGLMMRQDDSDT- 214 I +P ++ L+ EI +++E Q+ N R+ V+G++ R+ ++ Sbjct: 136 YFIKDKCLPNNIA-------LRCEIIIKKETFNQKYKHAFSNPRSFVSGVVNRKQENIVI 188 Query: 215 --LNSLGVFVWAWPDGP--------QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVR 264 LN L + + + P + +++L F +T + ++ + Sbjct: 189 SELNDLCLIAYELINFPVNEYQKNILTQIEIIEQLNFIQFVNFKTISNEFLTQKALSNLF 248 Query: 265 NEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQ-PVAQVAEVKAIQFAVGK 323 E L F DG+V+ A P R G + +A+K + + A+V I++ VGK Sbjct: 249 KEMKNNSL-FEMDGLVI-LANTPYIR-VTEGNPKHSIAFKVRGDNVKEAKVTFIEWNVGK 305 Query: 324 SGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR 383 +G + + P ++ V + E I G ILV+ AG IP+I V + Sbjct: 306 TGVFTPKVHIVPTEINGTTVSCFTGFNANYLIEKGIGEGAIILVTRAGDAIPQIIGV-KQ 364 Query: 384 GAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH 443 T P E + + +E+ I +++ + + + I EA L+ Sbjct: 365 TGVLTFPKDYEWKGDCRIVEKIES--KERIIKQILHFV--ESVDIPYIKEATINKLYNNG 420 Query: 444 RFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWV---MAMG--IPLTR 498 I +L LT + L S+ +++ + + P +++ A G I + Sbjct: 421 C-TSIELFLKLTQKDLLL---FGPKLSSTIYNSIQKSFEAPIEKFLSGYNAFGDYIGEKK 476 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQI 543 L + +L + G GS A Q+ + NA++ Sbjct: 477 ILLLLQKYPNLFELENLDAIDLVSIEGIGSKTATQIKQHFINAKL 521 >UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S561_PHYPA Length = 1163 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 83/394 (21%), Positives = 136/394 (34%), Gaps = 65/394 (16%) Query: 13 CWQSSVWAVCPAWSPAR-------AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLS 65 +S AV A S + + + L++ I + Y G + D YD L Sbjct: 292 LLAASKGAVETADSESEHPLVDGDILDRVETLRRVIADYSYQYHTLGNPLISDSAYDALV 351 Query: 66 ARLTQWQRCFGSE------PRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRE-- 115 L + +E V PP V H V + + ++ L W Sbjct: 352 RELKDLESKLPAEASEESVTAKVGAPPPLEIAKVRHAVPMLSLAAVYKEDELKAWHERLQ 411 Query: 116 -------------RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLIS 162 V+PKVDG+A+TL+Y GKL A +RG+G +GED T + Sbjct: 412 QRLNRMSNGEQPSTGAWVVEPKVDGIALTLLYERGKLVCAATRGDGAEGEDVTHNARNLK 471 Query: 163 AVPQTVSGPLAN-------STLQGEIFLQREGHIQQ--------QMGGINARAKVAGLMM 207 VP+ +S ++GE+++ + + N R AG M Sbjct: 472 GVPEVLSDHHKEINLQESVLEVRGEVYMTLLDFQELNDMKVKGGEKPFANPRNATAGSMR 531 Query: 208 RQDDSDT-LNSLGVFVWAWPDGPQLMS--------------DRLKELATAGFTLTQTYTR 252 + D L +A +S D L L F++ R Sbjct: 532 ILKNRDGDDRRLSFMAYAILSPEDNVSAGVETPPRLVRAQWDALNLLKQLDFSVNDD-NR 590 Query: 253 AVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPV 308 + D+ W ++ L + +DGVV + + W VAWK+ Sbjct: 591 KFASFDDALHYATRWRDSRSTLKYESDGVVFKINDLATQAKLGVVGSDPRWAVAWKFAAT 650 Query: 309 AQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 V ++ I+ ++G+SG I A L + + Sbjct: 651 EVVTILEGIELSIGRSGAIIPNARLKDITVSSSS 684 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 6/158 (3%) Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 ++ C + ++ K + G+G + L + + L L Sbjct: 870 CCNNKCPGRHSRKIKHFA-KTLF--KGLGPSILSDLEEAGMVVDPADFYALDVVSLSRLD 926 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP---LTRAALNASDERSWSQLLFSTEQFW 520 G+ + +A+L ++ + + A+GIP +T A L S +LL ++ + Sbjct: 927 GLGEKSAAKLVKAIEESKGKALWELITALGIPSVGVTAAKLLEQWFGSMERLLVASREEL 986 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 +PG G+ A + +W + +L S + + Sbjct: 987 LLVPGIGTVSASAIHDWCTDPFNVQLVSSIKEAGFSPT 1024 >UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JLD8_9ALTE Length = 490 Score = 290 bits (743), Expect = 9e-77, Method: Composition-based stats. Identities = 96/504 (19%), Positives = 170/504 (33%), Gaps = 70/504 (13%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR-DVMMPPLNGAVMH 93 ++++ +++ +D Y S + D YD L L + + G V H Sbjct: 19 RQIEESLERANDAYRNTDDSIISDSDYDALIDELARRDPGHALLTEVESEADFGAGKVRH 78 Query: 94 PVAHTGVRKMVDKNALSLWMRERSD------------LWVQPKVDGVAVTLVYRDGKLNK 141 + K+ + LS W+R L V K+DG+A L +DG L Sbjct: 79 QIPMLSTEKVKTDSELSAWVRRVESAAQNIGIRTPVLLSVTAKLDGMAGRL--KDGVL-- 134 Query: 142 AISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ-QMGGINARA 200 SRG+GL G + T +P+ V + + GE+ + + + + R Sbjct: 135 -ASRGDGLTGNNITH------ILPKLVVHGVGD----GELVMIQSYFDEHLSEEFKHPRN 183 Query: 201 KVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEV 260 V G + P + ++D + F T TR D + Sbjct: 184 VVTGAVGADTPR-------------PAAMKALNDH-----SIHFVSFTTLTRIDSRTDTI 225 Query: 261 AR---VRNEWWKAELPFVTDGVVVRAA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVK 315 E+ P+ TDG+V+ + + W+VA K V Sbjct: 226 VAQLPEIREYLLGNTPYPTDGLVLAVESPELRKELGSTGHHHNWMVAAKTVGETATTAVV 285 Query: 316 AIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIP 375 +Q+ +GK+G+++ V L V L + V + + +E I G ++ +G+ IP Sbjct: 286 GVQWQIGKTGRLTPVIQLKKVTLSGAVIANVTGHNAGKVEEMGIDVGAMATITRSGEIIP 345 Query: 376 RIDDVVWRGAERTKPTPPENRFNSLTCY-----FASDVCQEQFISRLVWLGAKQVLGLDG 430 + + PT L ++ C+ + +RL + G Sbjct: 346 FLVSATPAPNGASLPTHCPACTEHLKRRGDFLVCINNECEGRRHARLHHF-----FNIIG 400 Query: 431 ----IGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFT 486 G L I +T + + G +SA L + A+ +P Sbjct: 401 SIDLFGPVACDKLIAAG-VRSIQEVFAITAAEFEAM-GFGPGQSANLVAELEAAKTRPVD 458 Query: 487 --RWVMAMGIPLTRAALNASDERS 508 R + AMGI + R Sbjct: 459 DFRVLAAMGISNLGRGDSKKLLRH 482 >UniRef50_A1SX61 DNA ligase n=6 Tax=Proteobacteria RepID=DNLJ_PSYIN Length = 649 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 95/522 (18%), Positives = 174/522 (33%), Gaps = 55/522 (10%) Query: 46 DDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-SEPRDVMMPPLNGAVMHPVAHTGVRKMV 104 + +++ + + D YD + + + + + + V P K Sbjct: 50 NAFYRSAEQIINDSTYDAFLSEFSTYNPDHPYLLTVEPEVLADSKTVPLPKKMLSTDKAY 109 Query: 105 DKNALSLWMRE-------------RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKG 151 + W+ + V PK+DG A Y DG +RG+G +G Sbjct: 110 SFEEIKKWIDRLLKAAIEVGVSESEIQIKVTPKLDGYAA---YDDG--ISLYTRGDGARG 164 Query: 152 EDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ-QQMGGINARAKVAGLMMRQD 210 +D T+ + V L GEI +++ N+R A ++ + Sbjct: 165 QDITRAFNKGLQVANNGDRGLGP----GEIVIKKSYFDTVLSDKFENSRNIQAAIIAEKK 220 Query: 211 DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA 270 +++ A G + L L YT + + + + W + Sbjct: 221 VDESIQK------AIDVGACVFFPFLS-LENW----IGHYTEILVDFESIVE--KMW--S 265 Query: 271 ELPFVTDGVVVRAAKEPESRHW--LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKIS 328 + + DGVV+ E H W +A+K + +V + ++G+++ Sbjct: 266 AVDYDIDGVVLEVTNETLKEHMGATRHHHRWQIAFKVNAESAEVKVLNVTPQTSRTGRVT 325 Query: 329 VVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT 388 VA L P L + R + + + PG + + +G IP+I+ V+ + Sbjct: 326 PVAELEPTKLSGATISRATVHHYNMVKTNGVGPGAIVQLVRSGLVIPKIEKVIKAVEPQL 385 Query: 389 KPTPPENRFN------SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 P + L C +D C Q + LV K + DG G LH+ Sbjct: 386 AKECPSCGTHLIWESDHLVCPNKTD-CPAQTENTLVHFF-KTLGNNDGFGPKVIEKLHEF 443 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPF--TRWVMAMGI-PLTRA 499 + I L E + G + L Q ++R R++ A G+ L Sbjct: 444 G-IKKIHEIYELKQESFVSF-GFGDKTAQNLVEQLQVSRDVEIEDWRFLAAFGVSRLAGG 501 Query: 500 ALNASD-ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN 540 S L +T + QL G A ++E N Sbjct: 502 NCEKLLQHHSLDSLFEATVEDLVQLDGFAQVSADAIVEGLAN 543 >UniRef50_A6DPT5 NAD-dependent DNA ligase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPT5_9BACT Length = 647 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 91/533 (17%), Positives = 182/533 (34%), Gaps = 52/533 (9%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD-VMMPPLNGAVM 92 I L+ ++ Q + Y G+S + D YD L ++ + RD V V Sbjct: 3 IDALKAKLDQANQLYRTGGESPLSDAEYDYL------LEQVNDQKFRDKVGYEIEKNKVE 56 Query: 93 HPVAHTGVRKMVDKNALSLWMRERS-----DLWVQPKVDGVAVTLVYRDGKLNKAISRGN 147 V + K+ + + W + +S ++ V PK DG+++ + + DG A +RG+ Sbjct: 57 LAVPMGSLNKIKTQAEVFDWSKSKSIPLDTEICVTPKYDGLSLLVYFVDGIYKGAYTRGD 116 Query: 148 GLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI-QQQMGGINARAKVAGLM 206 G+ G+D + ++ + + GE + + N R VAGL+ Sbjct: 117 GMFGQDVGEHFTVNPLCDLRLPQDFTGYLI-GECIMDEAKFQTKYSEKFKNPRNMVAGLL 175 Query: 207 MRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKEL------ATAGFTLTQTYTRAVKNAD-E 259 R+ S L + + E A + + + D E Sbjct: 176 SRKTLSRELADVCYVAYGVRSAQMAHKQDQVEFCNRYINAQWKYKVLCPLYKLEDLKDAE 235 Query: 260 VARVRNEWWKAELPFVTDGVVVRAAKEPE----SRHWLPGQAEWLVAWK-YQPVAQVAEV 314 + +V + + F DG+V+ + AWK + + V Sbjct: 236 LQKVYDSETR----FQCDGLVLEINDSDLFHQIGKETNSLNPGAARAWKPESDDSLPSIV 291 Query: 315 KAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGI 374 K + + + K+G V + P+ L + V + R ++ IA G + + +G I Sbjct: 292 KEVVWQISKNGAAKPVIRIEPIDLAGVTISNVTGINARFIEDSGIAKGATVTIIRSGDVI 351 Query: 375 PRIDDVVWRGAERTKPTPPENRFNSLTCY-------FASDVCQEQFISRLVWLGAKQVLG 427 P++ V P + + L + +C + L+ + L Sbjct: 352 PKVIGVPNAIENVDLPKQCPSCESELVWNENRVDIVCENKLCPATNKAALIDFFS--TLK 409 Query: 428 LDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA-RKQPFT 486 D +GE +L + + + L LT E L G + K+ ++ ++ P Sbjct: 410 ADEVGEGIITSLWDAGY-QSVKNLLNLTMEDLLKLEGFKQRKAKKVLDSIKISVVDVPLP 468 Query: 487 R------WVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQ 533 R +G ++ + + + ++ G A+ Sbjct: 469 RLQHASNLFKGLG-----EKKLELLQKYDQAGIKPSFEELLEVDGYSEISAKS 516 >UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=DNLJ_MIMIV Length = 636 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 92/475 (19%), Positives = 176/475 (37%), Gaps = 32/475 (6%) Query: 18 VWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS 77 +WA+ P+ + +E +S + Y G S + D YD L RL + Sbjct: 13 LWAILPSLNATDIEEALSVSSEY-------YHNTGTSLISDQEYDILMDRLKELNPS-SK 64 Query: 78 EPRDVMMPPLNGAVMHPVAHTGVRKMV-DKNALSLWMRERSD-LWVQPKVDGVAVTLVYR 135 V P V P + K+ D+ A++ W+ E S + K+DG++ L + Sbjct: 65 IFAQVGAPVKGKKVKLPFWMGSMNKIKADEKAVNKWLNEYSGPYVISDKLDGISCLLTIK 124 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 + K K +RG+G G+D T + LI+ + + ++GE+ + ++ + Q Sbjct: 125 NNK-TKLYTRGDGTYGQDITHLLGLINIDIGLLEEIDQDIAIRGELIMSKKNFEKYQEIM 183 Query: 196 INARAKVAGLMMRQDDS---DTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTR 252 NAR V G++ + +S D + + + +S +LK L G + Y Sbjct: 184 ANARNMVGGIVNSKPESVNKDHAADVDLIFYEVIKPNDKLSRQLKILKEWGLKVV--YYN 241 Query: 253 AVKNAD-EVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQV 311 K D + K + + DG++V + + G + A+K Sbjct: 242 IYKTFDVNILESVLSERKKKSGYEIDGIIVTDNNKHVR--NISGNPSYSFAFKGDTPTID 299 Query: 312 AEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAG 371 VK + + K G + V L + ++ + + + I G I V +G Sbjct: 300 TVVKRVIWTPSKDGVLVPRIKFKKVRLSNVDLEYTTGFNAKYIVDNKIGSGAIINVVRSG 359 Query: 372 QGIPRIDDVVWRGAERTKPTPP---ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVL-G 427 IP I VV + P + ++ +D + I RL + Sbjct: 360 DVIPYITHVVKPAKKPDLPNIEYVWDKNGVNIILADINDN-ETVIIKRLTKF-----MRN 413 Query: 428 L--DGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA 480 + + I E L + F+ I + +T E G + + ++++ + Sbjct: 414 IGAENISEGITTRLVEAG-FDTIPKIINMTEEDFLTIDGFQERLAEKIYNNLQNS 467 >UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepID=DNLJ_SHEB5 Length = 648 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 102/550 (18%), Positives = 194/550 (35%), Gaps = 77/550 (14%) Query: 31 QEEISRLQQ----QIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP 86 +E I L + + + + ++ G +ED +YD W + + P + Sbjct: 32 KESIDELSEDELLALLKVTNALYRSGFPVIEDILYDS------FWNKFALNHPNHPFITS 85 Query: 87 LNGAVMH-------PVAHTGVRKMVDKNALSLWMRE-------------RSDLWVQPKVD 126 + V++ P K K + W+ ++ + PK+D Sbjct: 86 VETEVLNLGKTVALPQKMLSTDKAYSKEEIKKWLDRILKAAEELDIDTNEIEIRITPKLD 145 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQRE 186 G A + DG+ + +RG+G+KG+D ++ V + L GEI + + Sbjct: 146 GYAA---FDDGE--RLYTRGDGVKGQDVSRAFERGLKVVRNSERGLGA----GEIVINKA 196 Query: 187 GHIQQQMG-GINARAKVAGLMMRQD-DSDTLNSL--GVFVWAWPDGPQLMSDRLKELATA 242 ++ N+R A ++ ++ D L ++ G V+ L Sbjct: 197 YFEKKLSQYFENSRNIQAAIIAEKNVDERVLEAIKEGACVFH----------PFAVLPNW 246 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLP--GQAEWL 300 T Y + + D + E + + DGV++ A H W Sbjct: 247 ----TGNYQDLMTDFDGII----EQVWNSVEYDVDGVILEATDTRIKEHMGANRKFHRWQ 298 Query: 301 VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA 360 +A+K EV ++ ++G+++ VA L P + + RV + + + Sbjct: 299 IAFKINDEVAEVEVISVTPQTSRTGRVTPVAELVPTRISGAMISRVTVHHYNMVKINGVG 358 Query: 361 PGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFN------SLTCYFASDVCQEQFI 414 PG + + +G IP+I+ V+ + P + + L C SD C Q Sbjct: 359 PGAIVQIVRSGLVIPKIEKVIKPVDPQMPELCPSCKSHLLWESDHLVCPNKSD-CPAQTE 417 Query: 415 SRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLW 474 + LV K + DG G L +HI L P Q G + S L+ Sbjct: 418 NTLVHFF-KTLANNDGFGPKNIEKLANLG-VKHIHQMYDLKPHQFA-MYGFGEKTSKNLY 474 Query: 475 HQFNLARKQPF--TRWVMAMGIPLTRAALNASDERSWS--QLLFSTEQFWQQLPGTGSGR 530 Q ++ R++ A G+ + +S +L +T + +L G Sbjct: 475 DQLQASKNIEIEDWRFLSAFGVSRLGGGNCEKLLQHYSLRELFEATVEDIAELNGFARVS 534 Query: 531 ARQVIEWKEN 540 A +++ N Sbjct: 535 AEAIVKGLAN 544 >UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Moritella sp. PE36 RepID=A6FGB3_9GAMM Length = 413 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 158/373 (42%), Gaps = 19/373 (5%) Query: 22 CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD 81 CP+ Q IS L+ QI + Y+ + DG +D L LT C Sbjct: 44 CPS---VLNQHRISYLETQIIKHRRIYYAGQTPLLHDGEFDLLVDELTVLSHCLSPVLTQ 100 Query: 82 VMMPPLNGA-------VMHPVAHTGVRKMVDKNALSLW--MRERSDLWVQPKVDGVAVTL 132 + L H + + ++ A+ + + + L +QPK DG+A+ L Sbjct: 101 IGGGNLQHNDTRQRDRQPHRQQMLSLNSVRERTAVDKFYQLHQDQQLLIQPKFDGMAIEL 160 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 VY G L A SRG+G +G+D + +AV ++ P + GE+++ ++ Q + Sbjct: 161 VYEKGMLVGASSRGDGKQGKDLLALMLRSNAVNSMIAYPYT-LVIHGELYVGQQDW-QLR 218 Query: 193 MGGINARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDGPQLMSDR-LKELATAGFTLTQTY 250 +++R AG+ + + T + SL W W D P L +LA GF Sbjct: 219 GKYVSSRHMTAGIASQLSPAQTDVMSLRFMPWRWIDSPYNNELMGLAQLAMLGFADMSKM 278 Query: 251 TRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPV 308 + + ++ + E F+ DG+V++ A R W +A K+ Sbjct: 279 SHVIDRPQDIDYWLAHYQNTE-AFLLDGIVLKLANNTLQRQYGHTQHAPRWALALKFTGP 337 Query: 309 AQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVS 368 ++ V I + VGKSG+++ + + P+ L ++V RV+ S + I G Q+ + Sbjct: 338 KGLSNVIDITYQVGKSGRVTPIIHVQPLALSGRQVTRVSGRSQPWLLQSKIEVGSQVEIE 397 Query: 369 LAGQGIPRIDDVV 381 L G P++ +V Sbjct: 398 LVGNATPQLTRLV 410 >UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=DNLJ_VESOH Length = 632 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 100/525 (19%), Positives = 177/525 (33%), Gaps = 73/525 (13%) Query: 49 WKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP-----LNGAVMHPVAHTGVRKM 103 ++ GK + + YD + L + + P + P V+ P + K Sbjct: 36 YRSGKPIISNEDYDFIY--LATLKNKEPNNPLFKSIEPEGRAFAEEKVLLPELMLSIDKA 93 Query: 104 VDKNALSLWMRE-------------RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLK 150 N +S W+ + PK+DG A + DG N+ +RG+G K Sbjct: 94 YSWNEMSKWIERLEKSGMLIGLDLNAIQIKATPKLDGFAG---FDDG--NRLYTRGDGKK 148 Query: 151 GEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ-QMGGINARAKVAGLMMRQ 209 G D ++ V + L GEI +++ + R + L+ + Sbjct: 149 GSDISRVFKRGLCVFKDSGRGLGA----GEIVVKKSYFEKYLVHSFEYPRNFQSSLIKEK 204 Query: 210 DDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWK 269 + A D L +K L + + T V +E+ Sbjct: 205 ALDEQAQK------AIIDKGALFVPFIK-LPIW----SGSMTELVAKFEEIVSQVLVM-- 251 Query: 270 AELPFVTDGVVVRAAKEPE--SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKI 327 + F DGVV W +A+K +V + VG+SGKI Sbjct: 252 --VDFDVDGVVFEVINIDLKTQMGANRKFHRWQIAFKENKDIVQVKVLNVMPQVGRSGKI 309 Query: 328 SVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER 387 + VA + P +L + RV +E + G + ++ +G IP+I V+ Sbjct: 310 TPVAEVEPTLLSGATIVRVTGHHYGLVKEQGLGIGSVVELTRSGLVIPKIISVL------ 363 Query: 388 TKPTPPENRFNSLTC-----------YFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAG 435 KP P + N L+C + C Q I R+ + DG G A Sbjct: 364 -KPMPVDIPDNCLSCGMPLVWESDFLVCVNHKNCPAQIIGRITYFFKVLANN-DGFGIAT 421 Query: 436 WRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNL--ARKQPFTRWVMAMG 493 L+ + + L E+L G + S L Q + + K R++ A G Sbjct: 422 VEKLYAHN-IRSVSQIYTLNVERLMAI-GFGEKTSINLISQLSRSISEKIEDWRFLAAFG 479 Query: 494 IPLTRAALNASDERS--WSQLLFSTEQFWQQLPGTGSGRARQVIE 536 + + +S + + T + + G A+ +++ Sbjct: 480 MHRMGLGNCENLLKSYRLNDIFDLTLEQITNIDGFAELTAQVIVQ 524 >UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Siphoviridae RepID=B2I4G8_9CAUD Length = 323 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 80/360 (22%), Positives = 146/360 (40%), Gaps = 49/360 (13%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMH 93 ++ +++ IK+ + Y++ G S + D YD+L R + G G + H Sbjct: 1 MTNVKEFIKRCQEAYYQ-GMSLISDEEYDRLIKRF-PLEEEIGP----------KGDIPH 48 Query: 94 PVAHTGVRKMV----DKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGL 149 ++K+ DK + + +D K+DG A++L+Y +G+ +A++RGNG+ Sbjct: 49 LYRMYSLQKVYYGRGDKAPFNPLGQVETD-----KLDGCAISLLYINGEFVQALTRGNGI 103 Query: 150 KGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQ 209 G D T V + +P+T+S + + + GE+ + +E N R +G + + Sbjct: 104 LGNDVTHNVK-MLNIPKTISQKV-PTQITGEVLITKEVE--------NKRNYASGAINLK 153 Query: 210 DDSDTLNSLG-----VFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVR 264 D D + +G + + + L L V N + Sbjct: 154 DSDDFIQRIGEGGLIFVAYGIQCSAETVGITEAYLKDM-LWLENENFLTVVNVRSFFKWI 212 Query: 265 NEWWKAELPFVTDGVVVRAAKEPE--SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVG 322 TDG VVR + W A K ++ + +++ VG Sbjct: 213 ----------PTDGKVVRINDNNKFFREGWTNKFPRGAFAIKEDEEGEITTLVKVEWQVG 262 Query: 323 KSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW 382 SGK++ V PV++DD + + + +V D+ G QI V AG IP I + V+ Sbjct: 263 ASGKVTPVGYFEPVIIDDATIVKATLNNVDYINALDLEIGCQIRVIRAGGVIPCIVERVY 322 >UniRef50_C1M1N3 DNA ligase, NAD-dependent, putative n=1 Tax=Schistosoma mansoni RepID=C1M1N3_SCHMA Length = 311 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 15/202 (7%) Query: 279 VVVRAAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPV 336 +VV+ + ++ W VA+K+ ++AI++ VG++G ++ VA LAPV Sbjct: 1 MVVKVDDRRLQQDLGFVARAPRWAVAYKFPAQEASTRLEAIEWQVGRTGALTPVARLAPV 60 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV------WRGAERTKP 390 + V + ++ D+ GD +++ AG IP++ + R Sbjct: 61 SVGGVVVSNATLHNIDEVHRLDLRAGDTVVIYRAGDVIPKVMRRLDDDGHAARAPVALPD 120 Query: 391 TPPEN-------RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH 443 P + A C Q L +++ + ++G+GE + Sbjct: 121 ACPVCASAVVRPEGEVVARCSAGLFCPAQRKEALRHFASRRAMDIEGLGEKWVDLMVDAG 180 Query: 444 RFEHIFSWLLLTPEQLQNTPGI 465 L+ EQL P + Sbjct: 181 LLHTPADIYRLSAEQLLQLPRM 202 >UniRef50_D1JM64 NAD-dependent DNA ligase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM64_9BACE Length = 652 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 95/560 (16%), Positives = 187/560 (33%), Gaps = 101/560 (18%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-SEPRDVMMPPLNGAVMH 93 L IK+ + Y + G E+ D YD L + + Sbjct: 11 DVLLDMIKRHNKMY-RMGAPEISDAEYDAEIELLKTLDPDNEWFKHTEPAFVSETRKRAL 69 Query: 94 PVAHTGVRKMVDKNALSLW-----MRERSDLWVQPKVDGVAVTLVYRDGKLN-KAISRGN 147 P+ + K+ D + L W ++ + + PK+DG++ L+Y +L +A SRG Sbjct: 70 PIPMKSLNKVKDISELKKWYMSLGLKGNAGVVCMPKLDGLS--LLYN--ELTGEAYSRG- 124 Query: 148 GLK--GEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG---------GI 196 G++ G+D T A Q + + GE + R Q G Sbjct: 125 GIENEGQDCTNH---YQASTQCYNPASSFHYTFGEFVINRSDWEQHFHGKRSKFTGDIFK 181 Query: 197 NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGP-----------QLMSDRLKELATAGFT 245 + R AGL+ R + D L F + + + + + ++ F Sbjct: 182 SPRNTAAGLLNRDEPCDYLEHASFFRYGVDESSLHDYNNFHSLIETICNIYQQEHLYHFA 241 Query: 246 LTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPE----SRHWLPGQAEWLV 301 N + + + EW K + DG+V+ RH G + + Sbjct: 242 FIDEL-----NEELLMNLFKEWSKI---YPIDGIVIYVDDLRLWEVIGRHQTSGNPLYAI 293 Query: 302 AWKYQP--VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 A+K+ + VK I + V KSG + V ++ V D ++ + + +I Sbjct: 294 AYKHPDFTESFETTVKGIVWKVSKSGALKPVVNIEMVDTGDCNMENPTGYNAGWINDHEI 353 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-------------YFAS 406 A G +ILV+ +G IP+I + + + + C + Sbjct: 354 AKGAEILVTRSGGVIPKILSTLSPATQEEQEKLWDEMSECPHCGSSTMWNENHIELCCTN 413 Query: 407 DVCQEQFISRLVWL---GAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 C ++++++ + + GE + F I + L +T L Sbjct: 414 PSCPGVQLAKIIFFYLTCGAENM-----GEETLSKIFNAG-FTSIPAILNVTFNDLIKIE 467 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQL 523 G + + RK + L+ +++ F Sbjct: 468 GFGD-SISNII--LENNRKI--------------------MQGVDLATLMQASDCF---- 500 Query: 524 PGTGSGRARQVIEWKENAQI 543 G G +A+++++ ++ + Sbjct: 501 KGIGKIKAQKILDEMDDEDL 520 >UniRef50_Q9EMK7 AMV199 n=1 Tax=Amsacta moorei entomopoxvirus 'L' RepID=Q9EMK7_AMEPV Length = 532 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 91/523 (17%), Positives = 189/523 (36%), Gaps = 59/523 (11%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR-DVMMPPLNGAVM 92 + L+ I+ D+ Y+ + + D YD L + +E + V Sbjct: 25 YNDLENIIQTLDNSYYDKEA-LISDKKYD-LIR--NFINNKYPNESLCKKIGYTPEDKVR 80 Query: 93 HPVAHTGVRKMV-DKNALSLWMRERSD--LWVQPKVDGVAVTLVYRDGKLNKAISRGNGL 149 K N L W+ E L + K DG++V D K NK SRG+G Sbjct: 81 LKYFMGSENKTYKSDNKLLSWINEYHTNILVLSAKADGISVLW---DIKNNKIYSRGDGK 137 Query: 150 KGEDWTQKVSLI-----SAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAG 204 G+D T ++ + + ++GE+ + + + R VAG Sbjct: 138 YGKDITHFINYFNFSDDKNINNNDIFKNNINFVRGELVIDKPEN----------RNIVAG 187 Query: 205 LMMRQD-DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK-------- 255 + R + D +T L ++ A+ +++ R+ +L LT+ R VK Sbjct: 188 QINRNEIDKETA--LKIYFVAY----EILEPRMTQLEQFH-KLTENSIRTVKYDSVDYNI 240 Query: 256 NADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVK 315 + ++++ + N + EL + DG+++R G W + +K + VK Sbjct: 241 SYEQLSEIYNNYT-QELSYYIDGIIIRNNNLNPVIK--SGNPPWSICFKETDKIYITTVK 297 Query: 316 AIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIP 375 I++ + K A L P+++D+ + V + + + I G + + G IP Sbjct: 298 EIKWDISKKNIYIPKAILEPIIIDNSTINAVACHNAKYVIDKKINTGSIVEIVKKGGVIP 357 Query: 376 RIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG 435 I++V+ + P+ + + F +E I R+++ + G I + Sbjct: 358 IINNVIKESD--IEIILPDGILSGVNIIFTGVN-KESEIKRILYFF--KSFGYKNINKTI 412 Query: 436 WRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKS-AQLWHQFN--LARKQPFTRWVMAM 492 L+ + E+ N K+ +L ++ + A+ Sbjct: 413 IDKLYMLGYVNILKYL-----EKDINIEEYNNKKTYIKLLEVIKDIKSKNYNIVDILTAL 467 Query: 493 GIPLTRAALNASDERSW-SQLLFSTEQFWQQLPGTGSGRARQV 534 + + + + L E+ + + G G ++++ Sbjct: 468 SLDSISKSRVCAIYNEFPDFLKDKNEKDYSSINGIGKSISKKI 510 >UniRef50_Q197A8 Putative DNA ligase 052L n=1 Tax=Invertebrate iridescent virus 3 RepID=VF205_IIV3 Length = 756 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 88/508 (17%), Positives = 186/508 (36%), Gaps = 52/508 (10%) Query: 32 EEISRLQQQIKQWDDDYWK-EGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA 90 E+ ++L + ++ D Y+ G + D YD L + + G + + P + + Sbjct: 7 EKYNQLLKLKEKADKAYYNGVGDPIMSDEEYDNLVDYMDELNPDGGVKTKVGASPSRSKS 66 Query: 91 VMHPVAHTGVRKMVDKNALSLWMR---ERSDLWVQPKVDGVAVTLVY--RDGK--LNKAI 143 V P+ + K+ ++ WM+ ++ L V+ K+DGV+ V+ K + Sbjct: 67 VKLPMPMNSLDKIKTQHEFDNWMKNWKPKAMLLVKEKLDGVSCLAVFTLEQNKPPKIELF 126 Query: 144 SRGNGLKGEDWTQKVSLI----------------------------SAVPQTVSGPLANS 175 +RG+G G + T+ ++ A+ P+ Sbjct: 127 TRGDGTTGTNITRLLNHGLKVGNDYCFDDMVNEDKWTTDWGCYLNAEAIDHWKKLPVKKV 186 Query: 176 TLQGEIFLQREGHIQQQMG-GINARAKVAGLMMRQD-DSDTLNSLGVFVWAWPDGPQ--L 231 ++GE+ + R+ +NAR V+G + ++ D L + + + Sbjct: 187 YIRGELIVTRKNFQTWYSNRFMNARNLVSGQVNKKSPDPKILQDIDFVPYDLVIDLKRPT 246 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEV----ARVRNEWWKAELPFVTDGVVVRAAKEP 287 M+ ++ L T YTR + +D + E K + + DG+V++ + Sbjct: 247 MTHEVEHLLFRMIGATPVYTRFLFLSDTISTESMADYLERRKEKSDYEIDGLVIQVDDDT 306 Query: 288 ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 + VA+K V +++ + K K + PV L + +V Sbjct: 307 LFAPPDNRNPKDTVAFKIMGTTARTTVTHVEWNLSKGSKYKPTIHITPVSLSGVTISKVT 366 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASD 407 + E I G +L++ +G+ IP I V+ A++ P + + Y+ Sbjct: 367 GFHGKYISENKIGKGAVVLITRSGEVIPHIVSVISPAAKQDVLLPSNGVWKGVDIYYDGA 426 Query: 408 VCQ-EQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIA 466 E + ++V LG G+ L+ + + + + ++L G Sbjct: 427 EEPREITVKKMVHFF--TSLGCLGLKTMTVGRLYDAG-YRTVEAIVGADTKKLVLINGFR 483 Query: 467 KSKSAQLWHQ--FNLARKQPFTRWVMAM 492 + +L N+A+ P + A+ Sbjct: 484 MV-AQKLLPSMWVNVAKATP-HELMAAL 509 >UniRef50_Q9YVT0 ORF MSV162 putative NAD+ dependent DNA ligase, similar to Thermus thermophilus SW:P26996 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVT0_MSEPV Length = 522 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 87/512 (16%), Positives = 195/512 (38%), Gaps = 43/512 (8%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMH 93 + + + IK ++ Y+ EG++ + D +YD++ + + + ++ + V Sbjct: 22 LEDISEIIKILNEKYY-EGETLISDEIYDKIIEYVNK--KYPDNDITKKIGYEPKNKVKL 78 Query: 94 PVAHTGVRKMVDKNA--LSLWMRE--RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGL 149 P K+ D++ + W+ + S + V K DG++V KL +RG+G Sbjct: 79 PYYMGSENKIYDEDEKKFNNWIEKYGTSSIIVSVKADGISVLWDIGKNKL---YTRGDGN 135 Query: 150 KGEDWTQKVSLIS-AVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMR 208 G+D + + ++ +P L++ ++GE+ + ++ G IN + Sbjct: 136 YGKDISWFLKYMNYDLP-----ELSDYVIRGELVINKDKTRNDVAGAIN-------SLEA 183 Query: 209 QDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFT--LTQTYTRAVKNADEVARVRNE 266 + D L + + + ++ K+L Y + + ++ + E Sbjct: 184 NRNEDILKEIYFVGYEILNPRFNQENQFKKLKQHKIRHIKAMKYDIEDVSLECLSELYQE 243 Query: 267 WWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGK 326 K ++ + DG+V+R + G W A+K +V + + + K K Sbjct: 244 -LKPKMKYDIDGLVIRNNNVNDPI--TDGNPPWSFAYKPPNTIYTTKVLNVIWQISKQNK 300 Query: 327 ISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE 386 +A L P+ L++K ++RV+ + + E I + + G IP++ +V+ Sbjct: 301 YIPIAELEPIKLENKTIKRVSCYNAKFVTENGIGTDAIVEIEYRGGAIPKLVNVIKPVT- 359 Query: 387 RTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 + P+ + Y D +E I + ++L + + L+ Sbjct: 360 VDESDLPDGKIIDNHLYAPIDS-KESNIKIISQFF--KILSIQAPNKKVIEHLYDNG-IT 415 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQ----PFTRWVMAMGIPLTRAALN 502 +I L L K + H N+A+ P + A+ IP + Sbjct: 416 NIVELL---KSDLTELLDTTKKINKNALHSINIAKSIEISLPLA--IAALSIPNLTEKVL 470 Query: 503 ASDERSWSQLLFSTEQFWQQLPGTGSGRARQV 534 + L +T+Q ++++ G A ++ Sbjct: 471 EKIYNTHKDFL-TTKQDFEKIKGINKLSAEKI 501 >UniRef50_B2ZXT5 NAD-dependent DNA ligase n=1 Tax=Ralstonia phage RSL1 RepID=B2ZXT5_9CAUD Length = 625 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 92/545 (16%), Positives = 190/545 (34%), Gaps = 56/545 (10%) Query: 42 KQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR---DVMMPPLNGAVMHPVAHT 98 KQ Y+++ + + D +D L + + + + V + V Sbjct: 16 KQARVAYYEKAE-IMTDAEFDALEDSIRRLDPKWDELQKTGTKVEVKNKKQEVKLLEFMP 74 Query: 99 GVRKMVDKNALSLWMRERS-DLW-VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWT- 155 K+ ++ + S ++W V K+DG ++ L YR G+ K I+RG+G G+D + Sbjct: 75 SKNKIYPEHVAKYAAKHASVEVWNVSHKLDGTSLQLAYRGGRPWKLITRGDGALGKDISF 134 Query: 156 ---QKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI-NARAKVAGLMMRQDD 211 V I +P + + E + ++ G NAR G+ RQD Sbjct: 135 FLPHLVK-IGMIPDHIKTDALVVVFRCEGIMPVAVFEKKWAGKYDNARQLANGVFNRQDM 193 Query: 212 SDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQT-YTRAVKNADEVARVRNEWWKA 270 L + + V + + + GF + T + +A+ + R+ N+ +A Sbjct: 194 HPALADVHMVVLSVYGMK--QGEGIMYAKRQGFHVVPTRMLKGRLDAEVLTRLLNKEREA 251 Query: 271 ELPFVTDGVVVRAAKEPESRHWLP-GQAEWLVAWKYQPVA--QVAEVKAIQFAVGKSGKI 327 + + DG+++ P + + + + A+K+ V+++ + + + Sbjct: 252 SI-YEMDGLILV--PSPRIMSYTSPDRPKDITAFKFNDEENAAEVPVESVVWQKTRLHRW 308 Query: 328 SVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER 387 ++ P +D V V + +E I PG + V +G IP+I VV +G + Sbjct: 309 QPKITIKPTFMDGVMVTNVTAHNPAWMKERGIGPGAIVKVLRSGGVIPKIVGVVKKGKFQ 368 Query: 388 TKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHR--F 445 P P + ++ + + LG++ + L++ Sbjct: 369 PPPGPYVEDG---RLFRMTEGDASTEVRGIHHF--MTTLGIELLASKTITKLYEEGFTTV 423 Query: 446 EHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFT-RWVM--------AMGIPL 496 + E T GI S ++ + R +M +G Sbjct: 424 YDYIDLAINGDEGRLQTAGIGVKMSQKIQAELERVLGSTINLRLLMVASGCFRDGIG--- 480 Query: 497 TRAALNASDERSWS------QLLFSTEQFWQQLPGTGSGRARQVIE-------WKENAQI 543 R L A + S F+ ++ G VI+ W + ++ Sbjct: 481 -RRKLEALEAAGISMRFLLKSSDFALRGELSKVKGFSDITIEAVIDGVNAFRKWFD--EV 537 Query: 544 KKLGS 548 ++L Sbjct: 538 RELLE 542 >UniRef50_Q7R767 DNA ligase, NAD-dependent, putative (Fragment) n=1 Tax=Plasmodium yoelii yoelii RepID=Q7R767_PLAYO Length = 354 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 16/169 (9%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA E+ +L+++I+ + Y++ + D YD+L A L + + S + Sbjct: 184 PAEVVEKARKLREEIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEARYPELVTPDSPTQ 243 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGVAV 130 V PP+ V H V + + L+ + R + +PK+DG+AV Sbjct: 244 RVGAPPVEAFTEVRHEVPMLSLENAFSEEDLTAFDRRVRKELSRDTLEYVAEPKLDGLAV 303 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQG 179 L+Y+DG L +A +RG+G GED T V + A+P + G +G Sbjct: 304 NLLYQDGVLVRAATRGDGEVGEDVTHNVRAVRAIPLRLKGEDFPDRFEG 352 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN 680 0.0 UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolytic... 679 0.0 UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI 676 0.0 UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNL... 674 0.0 UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN 673 0.0 UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DN... 669 0.0 UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH 664 0.0 UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 664 0.0 UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum ... 663 0.0 UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_T... 659 0.0 UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriac... 658 0.0 UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS 656 0.0 UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_H... 656 0.0 UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD 655 0.0 UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidan... 655 0.0 UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defen... 655 0.0 UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 654 0.0 UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_A... 653 0.0 UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT 652 0.0 UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA 651 0.0 UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 651 0.0 UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD 650 0.0 UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA 650 0.0 UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL 650 0.0 UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XG... 649 0.0 UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID... 647 0.0 UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ... 644 0.0 UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 643 0.0 UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU 642 0.0 UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9... 641 0.0 UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowsto... 641 0.0 UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV... 640 0.0 UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB 639 0.0 UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 ... 637 0.0 UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP 637 0.0 UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter pisco... 636 0.0 UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_E... 636 0.0 UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DN... 636 0.0 UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD 635 e-180 UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB 634 e-180 UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invi... 634 e-180 UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Clo... 634 e-180 UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipe... 633 e-180 UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL 633 e-180 UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus Re... 633 e-180 UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI 632 e-180 UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATC... 631 e-179 UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacte... 630 e-179 UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_L... 629 e-179 UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 Re... 629 e-178 UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DN... 629 e-178 UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus ... 629 e-178 UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A ... 627 e-178 UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 626 e-178 UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicu... 626 e-178 UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 626 e-177 UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNL... 626 e-177 UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB 625 e-177 UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ... 625 e-177 UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachl... 624 e-177 UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT 622 e-177 UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriac... 622 e-176 UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetac... 622 e-176 UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC ... 621 e-176 UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL 621 e-176 UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW 621 e-176 UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=D... 619 e-176 UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH 617 e-175 UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium... 616 e-175 UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate divi... 616 e-175 UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNL... 616 e-175 UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV 615 e-174 UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans D... 614 e-174 UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 614 e-174 UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM... 614 e-174 UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW 613 e-174 UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO 612 e-173 UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3... 611 e-173 UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ... 611 e-173 UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepI... 608 e-172 UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 ... 606 e-172 UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanoba... 603 e-171 UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN 603 e-171 UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 602 e-170 UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP 601 e-170 UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella mu... 601 e-170 UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepI... 601 e-170 UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_L... 600 e-170 UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA 599 e-170 UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 599 e-169 UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=... 599 e-169 UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia... 597 e-169 UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexib... 597 e-169 UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subs... 597 e-169 UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ 597 e-169 UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_A... 596 e-169 UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 Rep... 595 e-168 UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_H... 594 e-168 UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT 594 e-168 UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP 593 e-168 UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID... 593 e-168 UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacterace... 592 e-168 UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNL... 591 e-167 UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata ... 590 e-167 UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 589 e-167 UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DN... 588 e-166 UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2... 587 e-166 UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_... 586 e-166 UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 586 e-166 UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE 585 e-165 UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF 584 e-165 UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=... 580 e-164 UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM ... 579 e-163 UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 578 e-163 UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 42... 577 e-163 UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amo... 577 e-163 UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 Re... 576 e-163 UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=... 575 e-162 UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR 575 e-162 UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=... 574 e-162 UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DN... 572 e-162 UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN 572 e-161 UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 23... 572 e-161 UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 ... 572 e-161 UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_E... 570 e-161 UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE 570 e-161 UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_A... 569 e-160 UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 566 e-160 UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 206... 562 e-159 UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LI... 562 e-158 UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB 560 e-158 UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 Re... 560 e-158 UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL 560 e-158 UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG 557 e-157 UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA 557 e-157 UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthos... 555 e-156 UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM 555 e-156 UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=... 555 e-156 UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongi... 555 e-156 UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC ... 553 e-156 UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_S... 552 e-155 UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNL... 552 e-155 UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia florid... 552 e-155 UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactoly... 550 e-155 UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_... 550 e-155 UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT 550 e-155 UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=D... 550 e-155 UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuri... 548 e-154 UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL 547 e-154 UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=... 546 e-154 UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 1436... 546 e-153 UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DN... 545 e-153 UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI 545 e-153 UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ... 544 e-153 UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwini... 543 e-153 UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 Re... 543 e-153 UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-... 543 e-153 UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia en... 542 e-152 UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DN... 540 e-152 UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9... 538 e-151 UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 535 e-150 UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus... 534 e-150 UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobi... 532 e-149 UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD 532 e-149 UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepI... 531 e-149 UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli Re... 530 e-149 UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobact... 529 e-148 UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttle... 528 e-148 UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminoc... 526 e-147 UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473... 523 e-147 UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma h... 523 e-147 UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminoc... 523 e-147 UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (... 521 e-146 UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepI... 521 e-146 UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIG... 521 e-146 UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNL... 520 e-146 UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1... 519 e-146 UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_... 518 e-145 UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1B... 518 e-145 UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L... 517 e-145 UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepI... 517 e-145 UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA 515 e-144 UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens... 515 e-144 UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 513 e-144 UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=... 512 e-143 UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ... 511 e-143 UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria... 508 e-142 UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_S... 505 e-141 UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE 503 e-141 UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured orga... 503 e-140 UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LI... 500 e-140 UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 Rep... 500 e-140 UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostri... 499 e-139 UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation do... 498 e-139 UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bactero... 498 e-139 UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetale... 495 e-138 UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_... 492 e-137 UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocan... 491 e-137 UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4... 487 e-136 UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepI... 485 e-135 UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 484 e-135 UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3... 483 e-135 UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subs... 481 e-134 UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM 481 e-134 UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ... 480 e-134 UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATC... 479 e-133 UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCM... 478 e-133 UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNL... 478 e-133 UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas f... 473 e-132 UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin42... 471 e-131 UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4... 469 e-130 UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninog... 467 e-130 UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 84... 467 e-130 UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 20... 465 e-129 UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 5... 463 e-129 UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis p... 462 e-128 UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=... 462 e-128 UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID... 460 e-128 UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolic... 460 e-127 UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris ... 450 e-125 UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyoste... 446 e-124 UniRef50_B2PUQ1 Putative uncharacterized protein n=1 Tax=Provide... 446 e-123 UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS 442 e-122 UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNL... 440 e-122 UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Provide... 440 e-122 UniRef50_D2U3F9 NAD-dependent DNA ligase LigB n=1 Tax=Arsenophon... 428 e-118 UniRef50_D1P0P2 NAD-dependent DNA ligase adenylation domain prot... 422 e-116 UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis... 419 e-115 UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudo... 397 e-109 UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornu... 389 e-106 UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acid... 376 e-102 UniRef50_A1SX61 DNA ligase n=6 Tax=Proteobacteria RepID=DNLJ_PSYIN 373 e-101 UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNL... 363 1e-98 UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepI... 351 6e-95 UniRef50_A6DPT5 NAD-dependent DNA ligase n=1 Tax=Lentisphaera ar... 349 2e-94 UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp.... 347 7e-94 UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate ir... 334 5e-90 UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens ... 330 8e-89 UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 ... 330 9e-89 UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius ok... 328 4e-88 UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivi... 310 6e-83 UniRef50_B2ZXT5 NAD-dependent DNA ligase n=1 Tax=Ralstonia phage... 301 4e-80 UniRef50_Q197A8 Putative DNA ligase 052L n=1 Tax=Invertebrate ir... 298 4e-79 UniRef50_D1JM64 NAD-dependent DNA ligase n=1 Tax=Bacteroides sp.... 297 8e-79 UniRef50_Q9YVT0 ORF MSV162 putative NAD+ dependent DNA ligase, s... 289 1e-76 UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Sipho... 278 4e-73 UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Mori... 275 3e-72 UniRef50_Q9EMK7 AMV199 n=1 Tax=Amsacta moorei entomopoxvirus 'L'... 265 2e-69 UniRef50_C1M1N3 DNA ligase, NAD-dependent, putative n=1 Tax=Schi... 245 5e-63 UniRef50_A6MA76 Gp012 n=1 Tax=Lactococcus phage KSY1 RepID=A6MA7... 206 2e-51 Sequences not found previously or not previously below threshold: >UniRef50_A7GKJ1 DNA ligase n=95 Tax=Firmicutes RepID=DNLJ_BACCN Length = 669 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 114/582 (19%), Positives = 213/582 (36%), Gaps = 50/582 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S Q+ I L+ + ++ Y V D YD+ L + + S Sbjct: 1 MSKEAVQQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLETENPEFITEDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGV 128 V L+ V H + ++ L + R + K+DG+ Sbjct: 61 SVRVGGAVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDGVNVRYICELKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 AV+L Y G+ + +RG+G+ GED TQ + I A+P + + ++GE ++ + Sbjct: 121 AVSLHYEKGRFIQGSTRGDGITGEDITQNLKTIKAIPLRLQEEVT-LEVRGEAYMPKRSF 179 Query: 189 IQQQMG--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQLMSDR 235 ++ N R AG + + D L +FV+ D S+ Sbjct: 180 VKLNEEKEQNGEAVFANPRNAAAGSLRQLDPKIAAKRNLSMFVYGLADIEGKTITSHSEA 239 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESRH 291 L L GF R + +EV EW + L + DG+V++ E Sbjct: 240 LDFLGELGFKTNPN-RRICETIEEVIAYVEEWQEKRPNLDYEIDGIVIKVDDVTLQERLG 298 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W +A+K+ V + I+ +VG++G ++ A L PV + V+R ++ + Sbjct: 299 TTAKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNE 358 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK-----PTPPENR-------FNS 399 +E DI GD ++V AG IP + +VV+ + PT Sbjct: 359 DLIREKDIRIGDYVVVKKAGDIIPEVVNVVFDKRTGKEEAYHMPTHCPTCDSGLVRLEEE 418 Query: 400 LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + + C Q L+ ++ + +DG+GE L + + LT +QL Sbjct: 419 VALRCINPACPAQIREGLIHFVSRNAMNIDGLGERVITQLFEANYIRTFADLYGLTKDQL 478 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFST 516 + ++ L +++ R + +GI A A + L+ + Sbjct: 479 LQLDRFGEKSASNLVQAIEASKENSLERLLFGLGIRHVGAKAARTLAEHFETMDNLVKAG 538 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 E+ + + G A+ ++ + +N + L + Sbjct: 539 EEELKAINEIGEKMAQSIVTYFDNEDVLHLIQQFKDYGVNMT 580 >UniRef50_B5Y6V5 DNA ligase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=DNLJ_COPPD Length = 666 Score = 679 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 126/583 (21%), Positives = 233/583 (39%), Gaps = 49/583 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A++ I RL++ I+ + Y+ E+ D YD+L L ++ F S Sbjct: 1 MTREEAKKRIERLRELIEYHNYRYYVLDSPEISDEEYDKLYRELVTLEKQFPEFITPDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMR--------ERSDLWVQPKVDGV 128 + V PP V H V + ++ + + + + + + + K+DG+ Sbjct: 61 TQRVGAPPAKEFATVTHEVPMLSLDNAFTEDEIKAFDQRVRSALNQQHVEYFCEHKLDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQRE 186 AV+L+Y +G + +RGNG GED T + I +P + G ++GE F+ Sbjct: 121 AVSLLYENGLFVRGSTRGNGYVGEDVTANLKTIKTIPLRLKGENIPPVVEIRGEAFMMLR 180 Query: 187 GHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMS 233 N R AG + + D S T L + + + Sbjct: 181 DFEALNEQRQALGQPLFANPRNAAAGSIRQLDSSITAQRKLYFMPYGFGLVQGMDFETQE 240 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPE--S 289 LK+ GF + + + R + +E W + ELPF DGVV++ Sbjct: 241 RFLKQCQEWGFRINE-HNRKASSIEEALEFIRYWTEHRVELPFPADGVVIKVNNLRYWDI 299 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 + +A+K+ + ++K + F VG++G I+ VA L PV+LD V R + Sbjct: 300 LGTTAHAPRYAIAYKFPAEEKETKLKDVVFQVGRTGIITPVAMLEPVVLDGATVSRATLH 359 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS-------- 399 + ++ D+ GD + + AG IP I V R + + PP Sbjct: 360 NFDIVRQLDVRKGDVVKLKRAGMVIPEIIGVAAEKRTGKEEQIEPPTTCPVCGGPTEWDG 419 Query: 400 LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + C Q L+ ++ + +DG+GE+ L ++I L+ + L Sbjct: 420 AYLKCVNITCPAQLKGHLLHWASRDAMDIDGLGESIIENLVDMGLVKNIADLYKLSVQDL 479 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFST 516 P +A+ + +L+ ++ +PF R + +GIP A + A S + LL +T Sbjct: 480 LTLPRLAQRSATKLYENIQRSKDRPFFRVLYGLGIPRVGLKTAQMLAEHFGSINALLNAT 539 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + G G+ A +++ ++ Q+ +L L + + Sbjct: 540 MDELTSIEGIGTDTAETILKALQSPQVHELIDQLKTLGLKMEQ 582 >UniRef50_B0TDL0 DNA ligase n=41 Tax=Bacteria RepID=DNLJ_HELMI Length = 675 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 132/580 (22%), Positives = 226/580 (38%), Gaps = 49/580 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA A + I+ L++QI++ D Y+ E+ D YD+L L ++ S + Sbjct: 10 PADAAQRIAELREQIRRHDYCYYVLDAPEISDAEYDRLMRELLDLEQSHPELVTADSPSQ 69 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER-------SDLWVQPKVDGVAVT 131 V PL AV H V + VD L + R V+PK+DG+ V Sbjct: 70 RVGGQPLAAFRAVSHRVPLLSLANAVDDQDLREFDRRARERADRPLTYVVEPKIDGLTVV 129 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ 191 L Y +G+ +A +RG+GL GED T+ + + AVP + + + ++GE +L + + Sbjct: 130 LSYEEGRFIRAATRGDGLIGEDITENIKTVRAVPLRLKRDIKSLEVRGEAYLPKAAFARL 189 Query: 192 QMGGI--------NARAKVAGLMMRQDDSDTL-NSLGVFVWAW-----PDGPQLMSDRLK 237 N R AG + + D T L + + DG + L+ Sbjct: 190 NEEREEAGEAAFANPRNAAAGSLRQLDPKVTASRPLRAYFYNILHLEGADGVGEQVEALQ 249 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWL 293 L G + R + D+V W + +LP+ DG+VV+ + + Sbjct: 250 MLEDLGLPVNPE-RRYCRTIDDVIDYCRYWTEHRHDLPYEIDGMVVKVNELDQYPLLGET 308 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 + +A+K+ P + V+ I VG++G I+ A L PV L V R + + Sbjct: 309 AKSPRYAIAFKFPPEQAITRVRDITVKVGRTGVITPTAELEPVRLAGTTVSRATLHNEDI 368 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA--ERTKPTPPENRFNSLT---------- 401 +E DI GD +++ AG IP + V+ E P+ + Sbjct: 369 IRERDIHIGDYVVIQKAGDIIPEVLSVLKEKRTGEERPFFMPQTCPECHSPVSRLKGEAA 428 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 S C Q L+ ++ + ++G+G A L + LT EQ+ Sbjct: 429 IRCTSLACPAQAKEGLIHFASRDAMNIEGLGPAVVNLLWEAGLVRDPADLYDLTAEQVAP 488 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ 518 + K +A L ++ + + A+GI L A A S QL+ +T + Sbjct: 489 LERMGKKSAANLIAAIENSKSRGLAALIFALGIRLVGQTAAKTLARHFGSMDQLMKATTE 548 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 Q + G A + W +++ LA + + Sbjct: 549 ELQAVSEIGPKMAESLQRWFAVPANRQMIDRLAEKGLQME 588 >UniRef50_Q2SD47 DNA ligase n=5 Tax=Gammaproteobacteria RepID=DNLJ_HAHCH Length = 683 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 122/587 (20%), Positives = 228/587 (38%), Gaps = 55/587 (9%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA QEE++ L++ I + Y+ + D YD+L RL + + F S + Sbjct: 5 PAAIQEELNTLRETINDHNYRYYTLDDPSIPDAEYDRLMRRLREIEAEFPQTITPDSPTQ 64 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-----------RSDLWVQPKVDG 127 V P G V H + + ++ L + R R D +PK+DG Sbjct: 65 RVGAAPAEGFETVSHRLPMLSLDNAFEEQDLLDFDRRVRERLKEAEDARIDYCCEPKLDG 124 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQR 185 +A++L+YRDG L + ++RG+G GED T V + +P + G A ++GEI+L + Sbjct: 125 IAISLLYRDGYLVRGVTRGDGSAGEDITANVKTVKNIPLKLRGEGYPAELEVRGEIYLPK 184 Query: 186 EGH--------IQQQMGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG----PQLM 232 + + +N R AG + + D T L + ++ P Sbjct: 185 AAFDAINKDAAAKGEKTFVNPRNAAAGSLRQLDPRITAKRALEMCCYSVGYFEGELPGTQ 244 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAA--KEPE 288 D L +L G + + A E + +LP+ DGVV + + Sbjct: 245 HDILTQLQQWGLKINSQM-KLASGAQECLDYYRHIMSVRDQLPYEIDGVVFKVNRIDLQQ 303 Query: 289 SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 ++ W +A K+ ++ E+ A+ F VG++G ++ VA L PV + V + Sbjct: 304 ELGFVSRAPRWAIAHKFPAHEEMTELLAVDFQVGRTGAVTPVARLKPVFVGGVTVSNATL 363 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER--TKPTPPENRFNS------- 399 ++ + D+ GD +++ AG IP++ VV PE+ Sbjct: 364 HNMDEIRRLDVHIGDTVIIRRAGDVIPQVVSVVQDRRPENAVPVDRPEHCPVCGSDVLQL 423 Query: 400 ----LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 + C Q + +++ + +DG+G+ L + + S L Sbjct: 424 EGEAVARCSGGLYCSAQRKEAIKHFASRKAMDIDGLGDRLVELLVEKELIDSPASLYSLK 483 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 + + + + L + +++ F R++ A+GI A + A + L Sbjct: 484 APDVAGLERMGEKSAQNLINAIEASKQTTFARFIYALGIREVGEATAKVLAQHFPTLDLL 543 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 +TE+ + P G A + + + + L Q ++ E Sbjct: 544 KQATEEDLVEAPDIGPISAGHIRSFFQQEHNLETIDALLNQGVSWPE 590 >UniRef50_B9K734 DNA ligase n=13 Tax=Bacteria RepID=DNLJ_THENN Length = 693 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 129/583 (22%), Positives = 241/583 (41%), Gaps = 52/583 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 P EE+ RL+++I+ + Y+ + D YD+L RL + +R + S + Sbjct: 12 PKEVIEEVERLREEIEYHNYRYYVLNDPVITDEEYDRLMRRLIELERMYPELVTPDSPTQ 71 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGVAV 130 V L G V H V + ++ + + + + + K+DGV++ Sbjct: 72 RVGGKVLEGFKTVKHSVPMLSLDNTYNEEEIIEFDKRVKKTLQESEVEYVAELKIDGVSI 131 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ 190 L Y +G+ +RG+G++GED ++ V I +VP + ++GEI++ + + Sbjct: 132 ALRYENGRFVLGATRGDGVEGEDVSENVKTIRSVPLRLR-KPLTIEVRGEIYMPVDEFKR 190 Query: 191 QQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLK 237 N R AG + + + + L F++ G + + L+ Sbjct: 191 LNEEREEEGLPPFANPRNAAAGTLRQLNTALVASRRLDSFIYYVVHPENYGLKTQWEALQ 250 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHWL 293 L GF + ++R KN EV EW K EL + DGVVV+ + Sbjct: 251 FLKEIGFKVNP-HSRLCKNIQEVIEYWREWKERKRELDYWVDGVVVKVNRFDFQKVLGET 309 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W +A+K+ + + VG++G ++ VA L PV L V+R ++ + Sbjct: 310 SKAPRWAIAFKFPAEQARTRILDVTIQVGRTGVLTPVAELEPVQLAGTIVKRASLHNFEY 369 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS-----------L 400 +E DI GD + V AG IP+I + R + PP++ + Sbjct: 370 IREKDIRIGDYVFVEKAGGIIPQIVKSIPELRTGSEKEIKPPQSCPVCGGKVGKLSPDEV 429 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 + C + L +++ L ++G+GE L + + I LTP L Sbjct: 430 AIRCLNPHCPAKLKRALRTFVSREALDIEGLGEKIIDRLVDSGLVKDIADIFYLTPFDLA 489 Query: 461 NT-PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFST 516 PGI + A++ + A+K+P + + +GIP+ A + A +S + ++ Sbjct: 490 QLGPGIGQRTIAKILQEIEEAKKRPLHKLITGLGIPMVGQKTAKILAEHFKSLEAIAEAS 549 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + + +PG G AR ++E+ N + +++ L + E Sbjct: 550 YETLKDIPGIGPEIARSIVEYFRNPKTREIIEKLKKAGVKLEE 592 >UniRef50_A8ADI2 DNA ligase n=96 Tax=Gammaproteobacteria RepID=DNLJ_CITK8 Length = 671 Score = 669 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 120/586 (20%), Positives = 224/586 (38%), Gaps = 54/586 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 +++++ L+ ++ + Y E+ D YD+L L + + S + Sbjct: 2 ESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQHPDLITPDSPSQR 61 Query: 82 VMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVDGVAV 130 V PL + H V + + D+ + + + D + K+DG+AV Sbjct: 62 VGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSGDKLTWCCELKLDGLAV 121 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGH 188 +++Y +G L A +RG+G GED T V I A+P + G A ++GE+FL + G Sbjct: 122 SILYENGVLISAATRGDGTTGEDITSNVRTIRAIPLKLRGDNIPARLEVRGEVFLPQAGF 181 Query: 189 IQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DGPQLMSD 234 + N R AG + + D T L F + + P Sbjct: 182 EKINEEARRTGNKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHLG 241 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAK--EPESR 290 RL + G ++ T + + V + E + L F DGVV++ E Sbjct: 242 RLLQFKAWGLPVSDRVT-LCDSPEAVLDFYHKVEEDRPTLGFDIDGVVIKVNSMALQEQL 300 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 ++ W VA+K+ Q+ V+ ++F VG++G I+ VA L PV + V + + Sbjct: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVV-----WRGAERTKPTPPENR--------F 397 + + GD++++ AG IP++ +VV PT Sbjct: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEETRPVEFPTHCPVCGSDVERVEG 420 Query: 398 NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 ++ +C Q L +++ + +DG+G+ L + LT Sbjct: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFRLTAG 480 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLF 514 +L + + + + A++ F R++ A+GI A A+ + L Sbjct: 481 KLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 ++ Q++P G A V + + + L A+ I P Sbjct: 541 ASIDELQKVPDVGIVVATHVFNFFAEESNRDVIGQLLAEGIHWPAP 586 >UniRef50_A3DE88 DNA ligase n=12 Tax=Firmicutes RepID=DNLJ_CLOTH Length = 663 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 128/577 (22%), Positives = 224/577 (38%), Gaps = 50/577 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 ++ I L++ + Y+ E E+ D YD+L L + ++ S + + Sbjct: 2 DIEKRILELREILNYHSHKYYVEDAPEISDFEYDELYRELEKLEQERPDLITPDSPTQRI 61 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVAVTLV 133 PL G V+H V + + + L + R + V+ K+DG++V+LV Sbjct: 62 GGKPLEGFKKVVHAVQMQSLSDVFSREELLAFDRRVREAVGDDVEYVVEKKIDGLSVSLV 121 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM 193 Y +G + +RG+GL GED TQ + I +P + L ++GE+F+ ++ I+ Sbjct: 122 YENGVFTRGATRGDGLVGEDVTQNLKTIRTIPLRLKRDLPLLEVRGEVFISKKDFIKINE 181 Query: 194 G--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW----PDGPQLMSDRLKELA 240 N R AG + + D T L +FV+ + S+ L+ L Sbjct: 182 EQEAAGQQLFANPRNAAAGSLRQLDPKVTSQRKLDIFVFNIQRIEGQSFKTHSETLEFLK 241 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEPES--RHWLPGQ 296 GF + Y + K+ + V N + E+ F DG VV+ + Sbjct: 242 ELGFKTSPGY-KVCKDINAVWEEINRIGEERGEIDFEIDGAVVKVNSLEQREILGSTIKA 300 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W VA+KY + VK I VG++G ++ +A PV L V R + ++ +E Sbjct: 301 PRWAVAYKYPAEVKETVVKKITVNVGRTGVLTPIAIFDPVRLAGSTVSRATLHNMDYIKE 360 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----------LTCYF 404 DI GD + + AG IP + DVV R + PE Sbjct: 361 KDIRIGDTVRIRKAGDIIPEVVDVVFEKRSGNEAEFNMPEQCPVCGADVVREEGEAAYRC 420 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ--LQNT 462 C Q ++V ++ + ++G+G A L + + I L E+ L N Sbjct: 421 TGIECSAQLYRKIVHFASRDAMNIEGLGPAIIEVLLEKGLIKEIADLYYLHKEKETLVNI 480 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 + K L +++ R + GI A L + + S L+ ++ + Sbjct: 481 ERMGKKSVENLLASIEKSKQNNIDRLIFGFGIRHIGLRAAQLLSENFESLDALMNASAED 540 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 +P G A+ V ++ Q + L A + Sbjct: 541 IMAIPEFGEKMAKSVEQFFRQKQNRDTVEKLKAAGVN 577 >UniRef50_B6J1C6 DNA ligase n=8 Tax=Proteobacteria RepID=DNLJ_COXB2 Length = 677 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 117/586 (19%), Positives = 227/586 (38%), Gaps = 54/586 (9%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA+ Q+ I RL+Q+I + Y+ + + D VYD+L L + ++ + S + Sbjct: 7 PAKIQKRIERLRQEINDHNYRYYVLSQPTIPDSVYDELFHELQKLEKKYPETITPSSPTQ 66 Query: 81 DVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMRERS---------DLWVQPKVDGVA 129 V P + V H + + + D+ L + + + +PK+DGVA Sbjct: 67 RVGAEPLKVFEPVHHEIPMLSLDNVFDEKGLRAFDKRIRQRLKLDKPFEYVCEPKMDGVA 126 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREG 187 ++L+Y +G+L +A +RG+G GE+ TQ I++VP + G ++GE+ + REG Sbjct: 127 LSLLYENGELIRAATRGDGYTGENVTQNTRTIASVPLQLRGNDYPELVEIRGEVLMPREG 186 Query: 188 HIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DGPQLMS 233 + N R +G + + D T L + + D P+ Sbjct: 187 FAKFNREAEKRGDKTFANPRNAASGSLRQLDPRITAKRPLIFYGYLIGLLKGKDFPKNHC 246 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES-- 289 D LK G + + + V + + ++PF DG+V++ Sbjct: 247 DVLKWFKDWGIPVI-SEIKVVGGIEGCLDYYEHLVKTREKMPFDIDGIVIKVNSLQVQAE 305 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 ++ W +A+K+ ++ VKAI+F VG++G ++ VA L PV + V + Sbjct: 306 LGFVSRAPRWAIAYKFPAQEKMTVVKAIEFQVGRTGAVTPVARLEPVSVSGVTVSNATLH 365 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS-------- 399 + D+ GD ++V AG IP + + R + P Sbjct: 366 NFDELYRKDVRVGDTVIVRRAGDVIPEVVGPILAKRPKKAKLIKIPSRCPVCHAEVIKPE 425 Query: 400 ---LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP 456 + C+ Q + +++ L ++G+G+ Q + I L Sbjct: 426 GEAVARCVGGLYCRAQLRESIKHFASRRALDIEGLGDKLVELFIQEKLIKDITGIYQLKK 485 Query: 457 EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLL 513 + P + + + L ++K R++ A+GI A A L+ Sbjct: 486 SAITALPRMGEKSAENLLTAIEKSKKTTLPRFLYALGIRGVGDTTARTLARHFHELDLLM 545 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 ++ + Q++ G A + + +L + L + + Sbjct: 546 KASIETLQEIRDIGPVAAENIHAFFHQKHNAELINKLIHLGVHWPQ 591 >UniRef50_B3DWU2 DNA ligase n=1 Tax=Methylacidiphilum infernorum V4 RepID=DNLJ_METI4 Length = 689 Score = 663 bits (1712), Expect = 0.0, Method: Composition-based stats. Identities = 118/587 (20%), Positives = 217/587 (36%), Gaps = 52/587 (8%) Query: 23 PAWSP---ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG--- 76 P+ ++ L + I+++D Y+ E V D YD L L ++ Sbjct: 20 PSLDSLGYEEIKKRHDELVKLIRKYDYAYYVEAHPLVSDQEYDNLYHELETLEKLHPELI 79 Query: 77 ---SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQP 123 S + + PL+G V H + + K L ++ V+P Sbjct: 80 TPDSPTQRIGETPLSGFSQVTHEIPMLSLENTYSKEELFAFLERIKRALPGKKISFTVEP 139 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEI 181 K+DGV+++ VY++G + +RGNG G+D TQ + I ++P + P ++GE Sbjct: 140 KIDGVSISAVYKNGLFSLGATRGNGTVGDDITQNLKTIRSLPLRLETPDPPEYLEVRGEA 199 Query: 182 FLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----G 228 ++ + + N R AG + + D L V + Sbjct: 200 YMSPKDFERLNAQREKEGKVLFANPRNATAGSLKQLDPRVVAERPLAVVFYGAGKLVGMK 259 Query: 229 PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKE 286 + + L L G + N +EV + + +LP+ TDG V+ + Sbjct: 260 CKTQEEWLNFLKKIGLPI-PIVFWVCSNENEVYEAIGKLNECRNQLPYPTDGAAVKVNEW 318 Query: 287 PES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 + W A+KY + + F VG+SG I+ VA + PV L V Sbjct: 319 EYYSLLGYTAKAPRWAFAYKYGAERAKTRLNNVIFQVGRSGTITPVAEMDPVFLSGTTVS 378 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS--- 399 R + + + + D+ GD + + AG+ IP + V R + PPE + Sbjct: 379 RATLHNFDQVKRLDVKIGDVVYLEKAGEVIPEVVGVDLNQRRGTEKEIVPPEFCPSCGEK 438 Query: 400 -----LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 + ++ C Q R++ + + + G+GE+ L + + L Sbjct: 439 LSWEGIFLRCENENCPAQLKERILHFAQRNAMDIQGLGESLVDQLVDKGIVKDVADIYDL 498 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQ 511 E L N + K + L ++K+ +R + +GIP A + + Sbjct: 499 DEETLVNLDRMGKKSAQNLLKAIEESKKKDLSRLIFGLGIPHIGQKASEDLARYFGTMDK 558 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 L +TE+ LP G AR ++ + ++ L + + Sbjct: 559 LSHATEEELLNLPFIGEIMARSIVNYFRKEANRRRLEKLRKKGLNFV 605 >UniRef50_D1B5Q8 DNA ligase n=3 Tax=Synergistaceae RepID=D1B5Q8_THEAS Length = 673 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 129/582 (22%), Positives = 230/582 (39%), Gaps = 49/582 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A+ + L + I+ D Y++E E+ D YD L L +R F S Sbjct: 1 MDRSAARSRMEELAELIRHHDRLYYQENSPEITDQEYDALFRELVDLERSFPDLRLPDSP 60 Query: 79 PRDVMMPPLNGAVM--HPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVA 129 V P H + V + +S ++R D + +PK+DG+A Sbjct: 61 TLRVSGSPSEAFKRLPHSEPMLSLDNAVSREEVSDFLRRLYDALGGSAPVVCEPKLDGLA 120 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 V+L+YR G L + ++RG+G GED T V I +P+ + ++GE+++ R Sbjct: 121 VSLLYRGGVLIRGLTRGDGSVGEDVTSNVMTIRDLPKRIDYM-GELEVRGEVYMSRRDFA 179 Query: 190 QQQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQLMSDRL 236 N R AG + + D T L F++ + G + + L Sbjct: 180 ALNQRREEEGLPPFANPRNAAAGSLRQLDPRVTAQRNLSCFLYHVVNHREVGLKTQEELL 239 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE--PESRHW 292 L F + + + R ++ +EV ++W + P TDGVV++ E Sbjct: 240 LWLKGRSFPVQEDF-RLCRDPEEVLEYLDDWDRRRHSYPADTDGVVIKLDSLEGREVLGS 298 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W VA+K+ P + V +I+ +VG++G ++ A L PV L +V+R ++ + Sbjct: 299 TNRSPRWAVAFKFPPEERPTRVLSIEVSVGRTGVVTPTAVLEPVRLSGTEVRRASLHNFD 358 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER--TKPTPPENRFNS----------L 400 D+ GD + V AG+ IP + V PPE + + Sbjct: 359 ELARKDVRVGDTVWVRKAGEIIPEVIRVDLGLRPEGTAPFVPPEGCPSCGSRLVRLPGEV 418 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 + C Q R++ ++ + + G+GE L + + LT E Sbjct: 419 AIRCINPSCPAQMKERIIHFASRDGMDVRGLGEKVASQLVDRGMVKDLADLFFLTMEDWL 478 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE 517 + + + ++ L ++AR +P + + A+GIP A A L+ ++E Sbjct: 479 SLDRMGERSASNLVRALDVARDRPLRKLIYALGIPGVGERTAQDLADRFGRLEALMDASE 538 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + + G G AR V ++ N +L L + E Sbjct: 539 EELASVEGVGPVVARSVRDFFRNDSTVRLVRRLRDAGVRMEE 580 >UniRef50_C7N3E3 DNA ligase, NAD-dependent n=3 Tax=Coriobacteriaceae RepID=C7N3E3_SLAHD Length = 708 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 124/611 (20%), Positives = 232/611 (37%), Gaps = 67/611 (10%) Query: 15 QSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC 74 S A A + + + I L+++I+ Y+ + E+ D +D L L + + Sbjct: 4 TSLFDADESAATVSDVKARIDALRKEIEHHTYLYYAKDAPEISDAAFDSLMRELRELELA 63 Query: 75 FG------SEPRDVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMRERSD-------L 119 S + V V H V + + + L W+ + Sbjct: 64 NPQYIDPTSPTQRVGGYVGEQFSPVRHAVRMYSLDNAMGLDELDEWLARTLEAIGHPVQF 123 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL------- 172 + K+DG ++ L Y G L KA +RG+G GED T + + +P + Sbjct: 124 CCELKIDGSSIALTYEAGVLTKAATRGDGTTGEDVTVNMRTVRDIPLRLRDDGMAGLRDS 183 Query: 173 -ANSTLQGEIFLQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFV 222 A+ ++GE+++ + + G N R AG + ++D T N L F+ Sbjct: 184 DASIEVRGEVYMPKSSFEKLNAAAEATGKQGFANPRNAAAGSLRQKDPKITQNRDLATFL 243 Query: 223 WAWPDGP----QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVT 276 +A D + +D L+ L GF + + EV + + LP+ Sbjct: 244 YAIADDAPIRAESQNDLLEWLRDCGFHVNPD-VKLCDTPQEVHDFCEQVAEKRDSLPYGI 302 Query: 277 DGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DGVVV+ R + W +A+K+ P + + I VG++G + VA L Sbjct: 303 DGVVVKVNDFATQRDMGFTARAPRWAIAYKFPPEEKTTVMHDITVQVGRTGACTPVAELD 362 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TK 389 PV++D V R + ++ + D+ GD ++V AG IP I V Sbjct: 363 PVLVDGSTVARATLHNLDEVRRKDVRIGDTVIVRKAGDVIPEILGPVLSLRPEGAKPWEM 422 Query: 390 PTPPENRFNSLTC-------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 P + + L S C Q + RL+ ++ + +DG+G+ L ++ Sbjct: 423 PATCPSCGSPLVREEGEAAFRCVSIDCPAQAMERLIHWASRGAMDIDGMGDEIVARLVES 482 Query: 443 HRFEHIFSWLLLTPEQLQNTPG-----------IAKSKSAQLWHQFNLARKQPFTRWVMA 491 R + + LT L + + +A+L ++ + F R + Sbjct: 483 GRVLDVADYYNLTEYDLATLETGRINKEGEPIHLGGTIAAKLMASLEASKSRTFARVLFG 542 Query: 492 MGIPLTRA---ALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGS 548 +GI A+ S +L+ +TE+ Q+ G G+ A+ ++ + +++ Sbjct: 543 LGIRHVGKTTGEAIAAAYPSMEKLMNATEEGLAQVDGIGAVIAKSIVTFLATEDNREVIH 602 Query: 549 WLAAQQITGFE 559 L +T + Sbjct: 603 RLERAGVTMAD 613 >UniRef50_Q2LTN8 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_SYNAS Length = 672 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 121/589 (20%), Positives = 218/589 (37%), Gaps = 55/589 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 A++ I L+ +I+ + Y++ E+ D YD L L ++ F S Sbjct: 2 MDAESARKNIEDLKARIEYHNRRYYQLDDPEISDAEYDSLLQELIALEKQFPQWLTEDSP 61 Query: 79 PRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKVDG 127 R + PL +H + + + + R R V+PK+DG Sbjct: 62 SRRIGAAPLSKFAPAVHLSPMLSLANAFSEEEILEFDRRLKRFLDSSERLSFVVEPKIDG 121 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIF 182 VAV L+Y G L +RG+G KGED TQ + + +P + ++GEI+ Sbjct: 122 VAVNLIYSSGVLTTGATRGDGAKGEDVTQNIRTLHTIPLKIQNGSDERLPEQIEIRGEIY 181 Query: 183 LQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GP 229 ++ + N R AG + + D S T L +F +A Sbjct: 182 METAAFRKLNERRLAAGEPPFANPRNAAAGSLRQLDASITARRPLKMFCYAVGIVRGRAF 241 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP 287 D L L GF++ + R V+ ++ E + ELP+ DG+V++ Sbjct: 242 TYHHDVLHALKKWGFSVNP-FIRQVEGIEKCIEFYRELQDLRNELPYEIDGMVIKVDDLS 300 Query: 288 ES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + W VA K+ ++ I VG++G ++ VA + PV + V R Sbjct: 301 LQTRLGAVSRSPRWAVACKFAATQATTVIRDIIVNVGRTGTLTPVALMTPVKVGGVTVSR 360 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP------TPPENRFNS 399 + + + DI GD +LV AG IP + V+ + T PE Sbjct: 361 ATLHNQDEIDKKDIRIGDTVLVQRAGDVIPEVVKVIVSNRSGREIPFKIPDTCPECGSEV 420 Query: 400 LTC------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + C Q + ++ + ++G+G+ L Sbjct: 421 VRLAGEAAHRCIGLSCPAQLRRHIQHFVSRGGMDIEGLGDKLVSQLVNQKLIHDPADLYY 480 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRA---ALNASDERSWS 510 L+ + L N +A+ + L L++ + + A+GI + A R+ Sbjct: 481 LSHDALLNLERMAEKSVSNLLSAIELSKHPSLDKIIFALGIRHVGEHISKILARRFRTLD 540 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 L+ +TE + G + ++E+ NA +++ L ++ E Sbjct: 541 ALINTTENELLAIRDIGPEVSSSILEFFRNASNRRVIEKLKKAGVSPLE 589 >UniRef50_A4G4R4 DNA ligase n=108 Tax=Proteobacteria RepID=DNLJ_HERAR Length = 696 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 114/591 (19%), Positives = 209/591 (35%), Gaps = 57/591 (9%) Query: 23 PAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------ 76 P S A+ L+ ++ + + Y+ V D YDQL L + Sbjct: 22 PDASDPSARAAW--LRSELNRHNYAYYVLDNPIVPDAEYDQLFRELQALEASHPELLVFD 79 Query: 77 SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKV 125 S + V L V H V + + + + + + + K Sbjct: 80 SPTQRVGALALTAFPPVTHSVPMLSLGNGFEDEDVLAFDKRVSEGLNSREEVEYATELKF 139 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFL 183 DG+A+ L Y DG L +A +RG+G GE+ T + + A+P + + P ++GE+ + Sbjct: 140 DGLAINLRYEDGVLVQAATRGDGATGENVTANIRTVRAIPLRLHTNNPPKVLDVRGEVMM 199 Query: 184 QREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DGP 229 + + N R AG + + D T SL F + D P Sbjct: 200 YKADLAKLNARQRDAGAKEFANPRNAAAGSLRQLDSRITAQRSLRFFSYGIGLLEGADMP 259 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAA--K 285 S L A G + + V+ + + +LP+ DGVV + Sbjct: 260 ASHSALLDWYAELGIPVC-SERAVVRGVQGLLEFYKATSEKRPQLPYEIDGVVYKVNRVD 318 Query: 286 EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + ++ + +A K+ + V+ I+ VG++G I+ VA LAPV++ V Sbjct: 319 QQLQLGFVSRAPRFAIAHKFPAEEALTTVQDIEVQVGRTGAITPVARLAPVLVGGVTVTN 378 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT--KPTPPENRFNS---- 399 + + + DI GD ++V AG IP + V + P + Sbjct: 379 ATLHNEDEVRRKDIQIGDTVIVRRAGDVIPEVVAFVPERRPASARPFIMPSSCPVCGSPI 438 Query: 400 --------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 C C Q L+ +++ + ++G+G+ L H Sbjct: 439 VRLEDEAIARCSGGWVKCAAQRKGGLLHFVSRRAMDVEGLGDQLVEQLVDKHIITTAADL 498 Query: 452 LLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERS 508 L L +A + + +++ R++ A+GI A A + Sbjct: 499 YKLGFRALAELDRMADKSAQNVLDALEKSKRTTLARFIYALGIRHVGEATAKELARHFGN 558 Query: 509 WSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 LL ++ + ++ G A + + +A +L L A +T E Sbjct: 559 LDALLQASPEQLLEVADIGPVVAASITAFFTDAMNIELIEQLRAAGVTWPE 609 >UniRef50_Q1D0P7 DNA ligase n=9 Tax=Bacteria RepID=DNLJ_MYXXD Length = 672 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 118/589 (20%), Positives = 219/589 (37%), Gaps = 56/589 (9%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------EP 79 +A L +++ + Y+ EV D YD+L L + S Sbjct: 3 DFQKAAARARELHRELAHHNYRYYVLDSPEVSDAQYDKLMRELQDLEAKHPSLQTPDSPT 62 Query: 80 RDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVA 129 + V G V+H + + + L+ + +PK+DG+A Sbjct: 63 QRVGGAAAEEFGEVVHRAPMISLANIFEDQGLTEFDERIRKLVGLPGIAYVCEPKLDGLA 122 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV-----SGPLANSTLQGEIFLQ 184 + L Y G + +RG+G GED T + I ++P ++ ++GE+F++ Sbjct: 123 IALRYEKGAFVQGATRGDGTTGEDVTSNLRTIRSLPMSLFPQDDVKVPDVLEVRGEVFIR 182 Query: 185 REGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG-----PQ 230 ++ + N R AG + + D T L VF++ G + Sbjct: 183 KKDFQKLNEKREEEGEPLFANPRNAAAGSLRQLDPRMTAARPLSVFLYECVPGEGVPVFK 242 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPE 288 ++L+ L T G + Q R + + V + + + ELPF DG+VV+ E + Sbjct: 243 THIEKLEYLKTLGLPINQY--RRAEGLEGVRQAYDASLKGRHELPFEVDGMVVKVDDEDQ 300 Query: 289 S--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 + W VA+K+ P + EV I VG++G ++ VA L PV + V R Sbjct: 301 RKRLGQVSKSPRWAVAYKFPPEEESTEVMDIGIQVGRTGALTPVAHLKPVKVGGVTVARA 360 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----- 399 + + + D+ GD + V AG IP I VV R A+ P++ Sbjct: 361 TLHNEDELRRKDVRKGDTVFVRRAGDVIPEIVSVVLSKRPADSAPFEFPKHCPVCDAVAT 420 Query: 400 -----LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 C Q + ++ ++ + ++G+G+ L T R + L Sbjct: 421 KDEDGAIIRCTGASCPAQLVEKIRHFASRLAMDIEGLGDKLAAQLVSTGRVKAFADLYAL 480 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 T E L + + L +++ R++ ++GI A A Sbjct: 481 TKEDLLTLERMGDKSADNLIASLERSKQTTQRRFLYSLGIRHVGDATAKALAEAFPRSEM 540 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 L ++ + ++ G A+ + + + Q ++ L A + P Sbjct: 541 LFEASLEDISRVKDVGPIMAQVIHTFFQEPQNQEAIRALLAAGVQPAAP 589 >UniRef50_B7J653 DNA ligase n=2 Tax=Acidithiobacillus ferrooxidans RepID=DNLJ_ACIF2 Length = 671 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 128/577 (22%), Positives = 222/577 (38%), Gaps = 52/577 (9%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 E I +L+ ++ ++ Y++E + D YD L + S + V Sbjct: 10 ERIQQLRAELVAANNAYYREDSPTLSDAEYDARLRELRTLEDRNPQWQSADSPTQRVGAA 69 Query: 86 PLN--GAVMHPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGVAVTLVYR 135 P+ G V + + T + + D++ S W+ RE L +PK DG++V + Y Sbjct: 70 PVEVFGEVHYAIPLTSLDNVFDQDGFSDWLARVQKGLGREDVPLSAEPKFDGLSVNIRYI 129 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQ- 192 +GKL +A +RG+G GED T V I VP ++G ++GE+ + + Sbjct: 130 EGKLVQAGTRGDGQTGEDVTANVRTIRNVPLQLTGKDWPELLEVRGEVVIPVAAFRRLNG 189 Query: 193 -------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGP----QLMSDRLKELA 240 N R AG + + D S T L F W W + + ++ L+ Sbjct: 190 ERLRAGDNPFANPRNAAAGSLRQLDSSVTAKRPLAYFPWGWGESSVPLGKSHIAVMERLS 249 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKE--PESRHWLPGQ 296 GF +T +Y R V E R +E + +PF DG+V + E + Sbjct: 250 AWGFEVT-SYLRGVHELTECQRYFSEMQKIREGMPFEIDGLVFKVDDLLAREQLGFTARA 308 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K+ + V+ I +VG++G I+ VA L PV + V R ++ + Sbjct: 309 PRWAIAYKFPAHEERTVVEDILASVGRTGVITPVAVLKPVQVGGVTVSRASLHNQDEVDR 368 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVW-RGAERTKPTP-PENRFNS-----------LTCY 403 DI GD +LV AG IP + V+ T+P P+ Sbjct: 369 KDIRVGDTVLVRRAGDVIPEVVMVIKEERPPATQPWHMPQRCPVCGSEVLRLANESAHRC 428 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 C Q + + +++ + + G+GE L + L L Sbjct: 429 MGGLYCPAQRMGAIRHFASRRAMDIRGLGEKLVEQLVGHGLVHTVADIYHLDEAALCGLE 488 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFW 520 +A + +L + + +R R++ A+GI A A L+ +T + Sbjct: 489 RMASRSAQKLLAEIDRSRHTSLPRFLYALGIRQVGEGTAKSLAIYFGDLDPLMAATPELL 548 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 Q +P G A V + + + + L A + Sbjct: 549 QNIPDVGPIVAESVAHFFAQPHNRDVIAALRAAGVQW 585 >UniRef50_C4K4K4 DNA ligase n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=DNLJ_HAMD5 Length = 702 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 126/612 (20%), Positives = 235/612 (38%), Gaps = 81/612 (13%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 E+I++L+ +K + Y E+ D YD L +L +W+ + S + Sbjct: 2 KSMLEKINQLRDVLKHHEYLYHVNDAPEITDAEYDALLEKLREWESQYPELMNPDSPTQK 61 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------------------- 118 V P V H V + + D+ + + S+ Sbjct: 62 VGASPSTAFKPVTHQVPMLSLDNVFDEKGFLAFNKRVSERLEAESSAQKASLNPLVRDSD 121 Query: 119 --------------LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAV 164 + K+DG+AV+L+Y G+L +A +RGNG +GE+ T + I ++ Sbjct: 122 QKNRSEKNVQEALTFCCELKLDGLAVSLIYEKGELTQAATRGNGFQGENITHNIRTIQSI 181 Query: 165 PQTVSGP--LANSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDT 214 P + G ++GE+++ + G + N R AG + + D T Sbjct: 182 PLRLKGKALPQRIEIRGEVYMPQAGFEKLNKQARANHEKIFSNPRNAAAGSLRQLDPHIT 241 Query: 215 L-NSLGVFVWAWP--DG---PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW 268 L F + +G PQ RL +L G + T A++V E Sbjct: 242 AQRPLNFFCYGVGLLEGGVLPQSHIQRLMQLKAWGLPVHDRIT-LCTGAEQVMAFYQEIA 300 Query: 269 --KAELPFVTDGVVVRAAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKS 324 +A L F DG+V++ E +L W A+K+ + +V ++F VG++ Sbjct: 301 QARATLGFDIDGIVIKVDDVLLQEKLGFLAKAPRWATAFKFPAQEKTTQVLGVEFQVGRT 360 Query: 325 GKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRG 384 G ++ VA L PV L V N+ + + GD ++V AG IP+I +V+ Sbjct: 361 GALTPVARLEPVELGGALVSNANLHNADEIARLGLRIGDTVVVRRAGDVIPQIVNVIIES 420 Query: 385 AER--TKPTPPENRFNS-----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGI 431 + + P + + C Q L A++ L ++G+ Sbjct: 421 RPQNTVEIIFPHHCPICKSVAKRIEGEAVIRCTGGLFCPAQRKEALKHFVARRALDIEGL 480 Query: 432 GEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMA 491 G+ L ++ LT E+L + + + + L + ++K F R++ A Sbjct: 481 GDKIIHQLVDKKYVQNPADLFHLTSEKLLSLKRMREKSAQNLLNSLKKSQKTTFARFLYA 540 Query: 492 MGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGS 548 +GI AA A L + + +++P G A+ ++++ N +++ S Sbjct: 541 LGIREVGETTAANLALYFGQLDLLRKADIETLKKVPDVGEVVAKNLVDFFGNEHHQQVIS 600 Query: 549 WLAAQQITGFEP 560 L + + +P Sbjct: 601 ALESV-LDWPDP 611 >UniRef50_Q2G1Y0 DNA ligase n=126 Tax=Firmicutes RepID=DNLJ_STAA8 Length = 667 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 125/576 (21%), Positives = 227/576 (39%), Gaps = 48/576 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 A ++ L + Q+ +Y+ E V D YD+L L + + S Sbjct: 2 ADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEYKTVDSPTVR 61 Query: 82 VMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLV 133 V V H + +++ L + + + + K+DG+AV+L Sbjct: 62 VGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGNVEYMCELKIDGLAVSLK 121 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM 193 Y DG + ++RG+G GED T+ + I A+P + PL ++GE ++ R ++ Sbjct: 122 YVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPLN-VEVRGEAYMPRRSFLRLNE 180 Query: 194 G--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQ----LMSDRLKELA 240 N R AG + + D T L VF+++ D S+ L EL Sbjct: 181 EKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELD 240 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQ 296 GFT + R V N D V +W + LP+ DG+V++ + + Sbjct: 241 KLGFTTNKNRAR-VNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKS 299 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K+ V ++ I+ ++G++G ++ A L PV + V R ++ + + Sbjct: 300 PRWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHNEDLIHD 359 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERT-----KPTPPENRFNSLTC-------YF 404 DI GD ++V AG IP + + PT + + L Sbjct: 360 RDIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEGEVALRC 419 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 + CQ Q + L+ ++Q + +DG+G + L+Q+ + + LT E L Sbjct: 420 INPKCQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEEDLLPLDR 479 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 + + K L A+ + +GI + + A + +LL TE Sbjct: 480 MGQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAELV 539 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 ++ G A+ V+ + EN I+ L L + + Sbjct: 540 EIHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNM 575 >UniRef50_Q0VR01 DNA ligase n=120 Tax=Proteobacteria RepID=DNLJ_ALCBS Length = 777 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 108/587 (18%), Positives = 209/587 (35%), Gaps = 54/587 (9%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 + + L+ Q+ W Y+ + V D YD++ L + + S Sbjct: 3 NNNDPSLQAQSLRDQLNDWSYRYYVQDDPAVPDAEYDRVFRALKDLEAQYPDLVTADSPT 62 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVDGV 128 + V PL+ V H V + D L + + + +PK+DG+ Sbjct: 63 QRVGDVPLDAFEQVQHEVPMLSLDNAFDDEELWAFDKRIRERLDVSEIIDYVAEPKLDGL 122 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQRE 186 AV+L+Y +G+L +A +RG+G GE+ T I +VP + G ++GE+ + Sbjct: 123 AVSLLYENGELVRAATRGDGQTGENITVNARTIRSVPLKLRGNDVPKRLEVRGEVVMPHA 182 Query: 187 GHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DGPQLM 232 G + N R AG + + D T L + ++ + P Sbjct: 183 GFEELNARQQEAGLKLFANPRNAAAGSLRQLDSRITASRPLEFYAYSMAQLEGWEHPPTH 242 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAA--KEPE 288 S L L G + R + + R + L + DGVV + + Sbjct: 243 SAMLDALRDWGLRVNPE-IRVCHGVEALLRFYQGILEKREHLDYDIDGVVYKVNRFDWQD 301 Query: 289 SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 ++ W +A K+ ++ + + + VG++G ++ VA L PV + V + Sbjct: 302 DLGFVSRAPRWAIAHKFPAQEELTVLNGVDWQVGRTGALTPVARLEPVHVGGVIVSNATL 361 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT------KPTPPENRFNSLT- 401 ++ Q DI GD ++V AG IP++ + + P L Sbjct: 362 HNIDEIQRLDIRIGDTVVVYRAGDVIPKVVRALPERRPANAQGIALPSSCPVCGSEILRG 421 Query: 402 ------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 +C +Q + +++ + +DG+G+ AL + L Sbjct: 422 HDQVVARCTGGLICGDQRREAIKHFASRRAMDIDGLGDKLVDALVDQELITTVADLYRLK 481 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 EQ+ + + + L ++ R++ A+GI A A + Sbjct: 482 AEQVAGLERMGEKSADNLIAALEASKTVGLGRFLFALGILQIGEETAKNLADCFGDLDSI 541 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + +P G A+ + + + + + L AQ ++ Sbjct: 542 RHAPLLLLLAVPDVGLEVAKAIGAFFAESDNEAVIDGLLAQGVSPQA 588 >UniRef50_B6FXZ9 DNA ligase n=2 Tax=Clostridia RepID=B6FXZ9_9CLOT Length = 678 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 122/580 (21%), Positives = 224/580 (38%), Gaps = 50/580 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + +I L +I D Y+ + E+ D YD L L + + S Sbjct: 1 MGKEDIKLQIDNLIDKINYHSDKYYNQDTPEISDFEYDMLMKELIKLEAENPEFKRVDSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVA 129 V L+ V H + L + R + V+ K+DG++ Sbjct: 61 SNRVGGMALDKFDQVTHKNPMLSLSNAYSAEDLRDFDRRVREMTDGDVEYVVEFKIDGLS 120 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 V + Y +G+ A +RGNG+ GED ++ V I ++P + ++GE+++ +E Sbjct: 121 VGITYENGEFKSAATRGNGIIGEDISKNVMTIKSIPLKIDDK-REIIVRGEVYISKENFE 179 Query: 190 QQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW-----PDGPQLMSDR 235 + N R AG + + D T L +FV+ DG SD Sbjct: 180 KVNEYQEEHDLQIFANPRNLAAGSLRQLDSKLTAKRPLDIFVFNLENINELDGIDTHSDS 239 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RH 291 L+ L GF++++ Y + K+ DEV W + L F DG+VV+ + Sbjct: 240 LEYLKKLGFSVSENY-KICKSIDEVIEFIEYWTENRGSLKFDIDGMVVKVNNIEQRNEMG 298 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 + W +A+K+ + +++ I+ VG++G I+ A L PV L V R + + Sbjct: 299 FTAKSPRWAIAYKFPAERKKSKILDIEVEVGRTGTITPTAILEPVRLAGTSVSRATLHNE 358 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS---------- 399 +E DI D ++V AG IP+I +VV R + P Sbjct: 359 DFIREKDIKLFDHVIVQKAGDIIPQIVEVVKEDRTGDEKDFVMPSVCPECGEPTVRLEGE 418 Query: 400 LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + C Q ++ +++ + +DG+GE+ + + + L EQ+ Sbjct: 419 AAVKCINISCPAQIRRGMIHFVSREAMDIDGMGESIITLFLKEGLIKDVSDIYYLKKEQI 478 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQLLFST 516 + + + L ++ R + +GI A + AS+ S +++ + Sbjct: 479 VPLERMGEKSADNLIKAIEKSKSNDLWRLINGLGIRFVGVKGAKILASNFSSLDEIINAD 538 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 + QQL GS + V+++ Q + L + Sbjct: 539 VERLQQLEEFGSIMSESVVKFFREEQNLAVIQKLKDAGVN 578 >UniRef50_A1VN98 DNA ligase n=75 Tax=Bacteria RepID=DNLJ_POLNA Length = 707 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 121/610 (19%), Positives = 225/610 (36%), Gaps = 69/610 (11%) Query: 18 VWAVCPA-WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 + PA PA E I+ L+ ++ Y+ + + D YD+L L + Sbjct: 7 FASPTPAPMPPASVIERIAALRAELDLHAHRYYVLDEPSIPDAEYDRLFKELQALEAAHP 66 Query: 77 ------SEPRDVMMPPLN--GAVMHPVAHTGVRKMVDKNA--LSLWM------------R 114 S + V PL +V H + +R D A + Sbjct: 67 ELLTPDSPTQRVGGKPLGQFASVRHRIPMLSIRTETDTEATGARNFDTRVRKELGLKESD 126 Query: 115 ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-GPLA 173 + + K DG+A++L Y +G L +A +RG+G GED TQ + I +P + Sbjct: 127 PPVEYVAELKFDGLAMSLRYENGVLVQAATRGDGEVGEDVTQNIRTIRQIPLRLPADAPP 186 Query: 174 NSTLQGEIFLQREGHIQQQM--------------GGINARAKVAGLMMRQDDSDTL-NSL 218 ++GE++++R+ +N R AG + + D + L Sbjct: 187 VMEVRGEVYMRRDEFEALNERQREKIAKGAKGEKTFVNPRNAAAGGVRQLDPAFAAERRL 246 Query: 219 GVFVWAWPDG---------PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW-- 267 F + + + + L+ L + F + TR A E+ Sbjct: 247 SFFAYGVGEITPPEEGGPVFETHFELLQTLKSWCFPVAAQ-TRLAYGAPELIAFHEAIGR 305 Query: 268 WKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSG 325 + +LP+ DGVV + R ++ + W VA KY Q+ V AI VG++G Sbjct: 306 QRDQLPYDIDGVVYKVNSLALQRKMGFVSREPRWAVAHKYPAQEQLTTVLAIDIQVGRTG 365 Query: 326 KISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA 385 K++ VA LAPV + V + + + D+ GD ++V AG IP + V+ Sbjct: 366 KLTPVAKLAPVFVGGVTVTNATLHNEDEARRKDVRVGDTVIVRRAGDVIPEVVSVLLDKR 425 Query: 386 ERTKP------TPPENRFNSLT-------CYFASDVCQEQFISRLVWLGAKQVLGLDGIG 432 + P P +++ C Q ++ K+ + ++G+G Sbjct: 426 VQDAPQFSMPRQCPVCGSDAVREEGEADYRCTGGLFCAAQRKEAILHYAHKRAVEIEGLG 485 Query: 433 EAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAM 492 + L T + L L + +A+ ++ L +++ R+V + Sbjct: 486 DKLVEQLVDTGVIRTLPDLYRLGFTSLASLDRMAEKSASNLVAALEKSKQTTLPRFVFGL 545 Query: 493 GIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSW 549 GI A A ++ ++E+ ++ G A+ + + E +++ Sbjct: 546 GIRHVGEATAKALARHFGQLDSIMDASEEQLLEVADVGPIVAKSIRTFFEQPHNREVVEQ 605 Query: 550 LAAQQITGFE 559 L A +T E Sbjct: 606 LRACGVTWEE 615 >UniRef50_Q180F3 DNA ligase n=8 Tax=Firmicutes RepID=DNLJ_CLOD6 Length = 677 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 112/579 (19%), Positives = 235/579 (40%), Gaps = 49/579 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 ++EI++L + I ++ Y+ + E+ D YD+L L + S Sbjct: 1 MQKVSVKDEINKLIETINYHNERYYNQDSPEISDYEYDKLMKELISLEEEHPELKRIDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVA 129 V PL+ ++H + + L + + + V+ K+DG++ Sbjct: 61 TNRVGGKPLDKFNQIVHKTPMLSLSNAFSEQDLRDFDKRVQEYVGENVEYVVEFKIDGLS 120 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 V L Y +G+ K +RG+G+ GED +Q + + ++P ++ ++GE+++ ++ Sbjct: 121 VGLTYNNGEFEKGATRGDGVVGEDISQNLMTVKSIPLKINDK-KELIVRGEVYISKDNFR 179 Query: 190 QQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRL 236 + N R AG + + D T L +FV+ + + S+ L Sbjct: 180 KVNEQQEEQEQPLFANPRNLAAGSLRQLDPKLTAKRPLDIFVFNMENIEEYDLESHSESL 239 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHW 292 + L GF+++Q+Y + K+ DEV W + L + DG+V++ + + Sbjct: 240 EYLEKLGFSVSQSY-KVCKSIDEVIEHIEYWTDNRGNLDYEIDGMVIKVNNIKQRDEMGY 298 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W +A+K+ + ++ I VG++G I+ A L PV L V R + + Sbjct: 299 TAKSPRWAIAYKFPAEKKKTKIVDIIVEVGRTGTITPSAILEPVRLAGTTVSRATLHNED 358 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS----------L 400 +E DI D +LV AG IP++ +V+ R + PE Sbjct: 359 YIREKDIKINDTVLVQKAGDIIPQVLEVIKEERTGDEIDFKMPEKCPVCSEPTIRLEGEA 418 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 + C Q ++ ++ + +DG+GE+ L + + + E + Sbjct: 419 AVKCINMSCPAQIRRGIIHFVSRDAMNIDGLGESIITLLLNEKIIQDVSDLYYIKKEDVV 478 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE 517 + + + + L + +++ R + +GI A + A + + +++ +T Sbjct: 479 DLERMGEKSADNLINSIEKSKENDLWRLINGLGIKFIGVKAAKILAYNFKDLDEVISATS 538 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 + ++L GS A V+E+ + + + + L + Sbjct: 539 EQLEELEEFGSIMANSVVEFFKEDKNMNVINKLKNVGVN 577 >UniRef50_Q1AZ75 DNA ligase n=16 Tax=Bacteria RepID=DNLJ_RUBXD Length = 685 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 129/581 (22%), Positives = 228/581 (39%), Gaps = 53/581 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 A A++ + L++QI+ + Y+ E E+ D YD L L + + F S + Sbjct: 18 AEARQRVEELREQIRYHNRKYYVEDAPEISDAEYDALYRELEELESRFPELVTPDSPTQR 77 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWM-----------RERSDLWVQPKVDGV 128 V PL V H V ++ L W R + K+DG+ Sbjct: 78 VGGEPLEEFEEVRHAVPMLSLQNARRVEELREWDARVRRLLGPEEEGRLRYVTELKIDGL 137 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG-PLANSTLQGEIFLQREG 187 AV+L Y +G+L + +RGNG GED T+++ I +VP + P +GE++++ + Sbjct: 138 AVSLRYENGRLVRGATRGNGFVGEDVTRQLRTIRSVPDRLDDDPPGVLEPRGEVYIKLKD 197 Query: 188 HIQQQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG---PQLMSDR 235 + N R AG + + D T L ++++ +G + S+ Sbjct: 198 FEEFNRRRQERGERPFANPRNLAAGSVRQLDPRVTARRPLTIYLYGVGEGYENFESHSEA 257 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRH 291 L L G + + D V W + L F DGVVV+ ++ E Sbjct: 258 LAALRRYGLRVNPHTVH--GDIDSVIEECGRWAKKREALDFQVDGVVVKVDSREQQERLG 315 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 + W +A+K++P+A ++ I VG++G ++ A L PV + + R + + Sbjct: 316 AVQKAPRWAIAYKFEPLAGRTRLRDIVVTVGRTGALTPQAVLEPVNVGGVTISRATLHNE 375 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT--KPTPPENRFNSLTC------- 402 +E I GD ++V AG IP++ V + + PE Sbjct: 376 DYIKEKGILIGDTVIVERAGDVIPQVVRPVPEERDGDEEEFRMPERCPVCGERVSRPEGE 435 Query: 403 ---YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 A+ C Q + ++ ++ + ++G+GE R L + L EQL Sbjct: 436 AITRCANVRCPAQALEHIIHWASRGAMDIEGLGEKLARKLFDLGLIRDVADLYELRAEQL 495 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFST 516 G+ + + L ++++PF R + +GI A L A L Sbjct: 496 APLEGLGEKSAQNLIRAIERSKERPFDRVLFGLGIRHVGSATAELIAERFSGEELLRGVG 555 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + Q+ G G AR V+E+ + +KL L + Sbjct: 556 VEELTQIEGVGEIVARAVVEYFSLEENRKLVRRLMEHGLNF 596 >UniRef50_Q2RGY0 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_MOOTA Length = 666 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 123/584 (21%), Positives = 213/584 (36%), Gaps = 50/584 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 A A++ + L++ I++ + Y+ + + D YD L L + + S Sbjct: 1 MDLAAARQRVEELRRLIEEHNYRYYVLDQPSISDREYDALMQELIALEEAYPELRTPDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRER-------SDLWVQPKVDGVA 129 + V P V HP + ++ L + R + ++ K+DG+A Sbjct: 61 SQRVGGAPREEFNQVRHPQVLLSLNDAFNEGDLLEFDRRVRDLAGRPVEYVIEAKIDGLA 120 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 V L YRDG +RG+G GE+ T + I A+P + PL ++GE+++ + Sbjct: 121 VALTYRDGLFTLGATRGDGQVGEEVTANLKTIPALPLRLRRPLPFLVVRGEVYMPKVAFT 180 Query: 190 QQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW----PDGPQLMSDRL 236 N R AG + + D T SL +FV+ + L Sbjct: 181 ALNAAREEAGEPLFANPRNAAAGSLRQLDPKITASRSLSLFVYQVISLTGAEVATQAGAL 240 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW---WKAELPFVTDGVVVRAAKEPES--RH 291 LA GF + Y + V W +A LP+ DG+V++ Sbjct: 241 DFLAELGFPVNP-YRVVAPDIQAVLEEVKAWTPERRASLPYEIDGLVIKVNDLALHSVLG 299 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W +A+K+ A V+ I VG++G ++ A L PV L V R + + Sbjct: 300 ATAKAPRWAMAYKFPAEQATARVEGIILRVGRTGVLTPTAVLTPVRLAGTTVSRATLHNE 359 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK--PTPPENRFNS---------- 399 +E DI GD ++V AG IP + V+ ++ T PE Sbjct: 360 DYIREKDIRIGDTVIVQKAGDIIPEVVAVIPERRTGSEEVFTMPERCPACGAAVVRPPGE 419 Query: 400 -LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 C Q + ++ ++ + + G+G A L + L E Sbjct: 420 AAHRCTGGLACPAQVLEGIIHFASRGAMDIQGLGPAIVAQLLEAGLIHDAADLYYLKEED 479 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 L + ++ L ++KQP R + A+GI A + A S +L + Sbjct: 480 LLKLERFGQQSASNLLAAIAASKKQPLERLIFALGIRNVGQRAARVLADHFGSLDKLAAA 539 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 T + LP G A + E+ + + + L + Sbjct: 540 TVEELTALPDIGPRIAENIREFFGEPRNRAVLEKLKKAGVRLEA 583 >UniRef50_A1WY80 DNA ligase n=2 Tax=Bacteria RepID=DNLJ_HALHL Length = 711 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 128/621 (20%), Positives = 227/621 (36%), Gaps = 84/621 (13%) Query: 23 PAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------ 76 P + +AQ+ +++L+ +I + D Y+ + + D YD L L + + + Sbjct: 4 PTATREQAQQRMAQLRGEISEHDYHYYVLDRPTISDAEYDALFRELQRLEAAYPDLVSSD 63 Query: 77 SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVD 126 S + V G AV+H + + + L + R D +PK+D Sbjct: 64 SPTQRVAGTAQEGFEAVVHDTPMLSLDNAFEADDLVDFDRRIRDRLGVASVVYTGEPKLD 123 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQ 184 G++++L Y+DG+L +A +RG+G GED T V + +VP + G ++GE+ ++ Sbjct: 124 GISLSLTYQDGELVRAGTRGDGHTGEDVTANVRTLRSVPLRLRGDGYPGRLEVRGEVVIR 183 Query: 185 REGHIQQQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQL 231 +E + N R AG + + D T L +F + D G + Sbjct: 184 KEDFERLNQARLDAGERPFANPRNAAAGSLRQLDPRITARRPLTLFTFGVGDPLALGVES 243 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEP-- 287 L+ LA GF T + R+ + LPF DG V + Sbjct: 244 HWQVLECLAGWGFRTTAPLEHL-EGVSACQAYRDRLIEERDALPFEIDGAVFKVDDLAVR 302 Query: 288 ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 E + W +A+K V+AI +VG++GKI+ +A L PV + V R + Sbjct: 303 EQLGFTARAPRWALAFKLPAREATTVVEAIVPSVGRTGKITPLARLQPVEVSGVTVARAS 362 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-RGAERTKP--------TPPENR-- 396 + + D+ GD ++V AG IP+I DVV + E +P PE Sbjct: 363 LHNADELARMDVREGDTVMVRRAGDVIPQITDVVLAKRPEGAQPWRFEERVQACPECGSA 422 Query: 397 -----FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 + C Q ++ +++ L +DG+GE L + Sbjct: 423 VQRIEGEAAHRCVGGLYCPAQREGAILHFASRRALDIDGLGEKIVEQLVAKGLVVDLADL 482 Query: 452 LLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDE----- 506 L QL + + L + AR R++ A+GIP Sbjct: 483 FRLGHAQLAGLERMGDKSADNLLAALDRARSTTLARFLYALGIPHVGEVTARRLAEAAYG 542 Query: 507 ---------------------------RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKE 539 + +++ + + + G AR + + Sbjct: 543 LMVAVPRGDRAALRAAAGLDAQTAITSEALLRVMAAPADDLEAIEDVGPVVARAIAGFFA 602 Query: 540 NAQIKKLGSWLAAQQITGFEP 560 +++ L A + EP Sbjct: 603 EPHNRQVVDHLCAAGVHWPEP 623 >UniRef50_B9XGZ1 DNA ligase n=3 Tax=Verrucomicrobiales RepID=B9XGZ1_9BACT Length = 680 Score = 649 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 113/592 (19%), Positives = 220/592 (37%), Gaps = 60/592 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A+ ++L ++I+ D+ Y+ E K + D YD+L L ++ F S Sbjct: 1 MTHNEAKTRHTQLVEEIRGHDNAYYVEAKPTISDQAYDRLYHELLDLEKKFPDLITSDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGV 128 + V PL V H + + + ++ E + ++PKVDGV Sbjct: 61 SQRVSGEPLKEFKPVHHLSPMMSLDNTYSQQDVRDFVGRVQRLLPNETLEWILEPKVDGV 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP----LANSTLQGEIFLQ 184 A+ L Y G +RG+G G+D T + I ++ + ++GE++L Sbjct: 121 AINLKYEKGVFVCGATRGDGTTGDDVTSNLKTIRSIAGKLKASGRKLPDVVEIRGEVYLP 180 Query: 185 REGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DGPQ 230 + + N R AG + + D L V V+ + P+ Sbjct: 181 KAAFTKINAERVAAGEEPFANPRNSAAGSLKQLDPRIVAKRPLDVIVYGLGVFEGAERPK 240 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK--E 286 + L L +AG + + +ADE+ NE + + + TDG V++ Sbjct: 241 EHDEVLAWLKSAGCKTPEKTWKCC-SADELIDAINELDQLRRKFTYETDGAVIKLNSFAL 299 Query: 287 PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 E + W +A+KY ++KAI VG++G ++ VA L PV L + R Sbjct: 300 RERIGFTSKAPRWAIAYKYAAEQAETKLKAITIQVGRTGALTPVAELEPVFLAGSTISRA 359 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----- 399 + + + DI GD + + AG+ IP + VV R + + P + Sbjct: 360 TLHNEDELRRKDIRVGDTVTIEKAGEVIPAVVGVVLTKRTGKEVQFQFPTHCPECGSKVA 419 Query: 400 -----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 + + C Q R+ A+ + ++G GEA L + Sbjct: 420 RTEGTENGAAGVVWRCLNAACPAQIRGRIEHWCARGAMDIEGGGEALVSQLVTKGLVREV 479 Query: 449 FSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNA---SD 505 LT +Q+ + + + ++ + R + +GI A + Sbjct: 480 SDLYSLTLDQVAGLERMGEKSAQNFLDGVQASKTRDMWRLLFGLGILHVGAGVAKRLGRR 539 Query: 506 ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + + ++++ ++ G A +++W + + ++L L + Sbjct: 540 FTTLDDIFAASQEQLTEVEDIGEVIAHSIVQWHQEPKNRELIELLRKAGLNF 591 >UniRef50_B8HV17 DNA ligase n=1 Tax=Cyanothece sp. PCC 7425 RepID=DNLJ_CYAP4 Length = 738 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 124/638 (19%), Positives = 223/638 (34%), Gaps = 103/638 (16%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 A + ++ + L+Q +++ Y+ +ED VYDQL L + + S Sbjct: 14 AAATTEIRQRVLELRQLVQRASYAYYVLDAPILEDVVYDQLYRELQDLETQYPELLTPDS 73 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE----------------RSDL 119 + V P +V H + + + W + Sbjct: 74 PTQRVGEQPATQFVSVQHRIPLYSLENAFAVADMQAWQDRWQRQGQAIGEQSATLRSPEY 133 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTL 177 + K+DG A+ L Y +G L + +RG+G+ GED T V I ++P + P + Sbjct: 134 VCELKIDGSALALTYENGVLVRGATRGDGVYGEDITANVRTIRSIPLRLDWPDPPPIVEV 193 Query: 178 QGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW--- 225 +GE FL + + N R AG + + D L F + Sbjct: 194 RGEAFLPLDVFHRLNQEREQAGESLFANPRNAAAGTLRQLDARIVAKRRLDFFAYTLHLP 253 Query: 226 ---------------------------------------------PDGPQLMSDRLKELA 240 PQ L+ L Sbjct: 254 LASARSATQPAAAQQLDLLAVAQSDPAVAAQQLDLSSASQAESVTTHLPQTQWQSLELLQ 313 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQ 296 GF + + + +V + + W + +LP++TDGVVV+ + Sbjct: 314 QIGFRVNP-HRQLCPTLADVRQYYDHWNHGRLDLPYMTDGVVVKLNSLRLQEHLGFTQKF 372 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +AWKY+P V EV I VG++G ++ VA L PV L V R + + R E Sbjct: 373 PRWAIAWKYEPEQAVTEVLNISVNVGRTGALTPVAELRPVQLAGTTVSRATLHNRDRLAE 432 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERT-----KPTPPENRF-------NSLTCYF 404 D+ GD++++ AG+ IP I V PT + Sbjct: 433 LDLHIGDKVVIHKAGEIIPEILQVFPELRPADARPYQLPTHCPECGQPVVQPVDEAVTRC 492 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 + C +V + + +DG+GE R L + LT QL Sbjct: 493 LNVSCPAIVRGAIVHWVGRDAMDIDGVGEKLVRQLVDRGLVNSVADLYRLTVAQLLTLER 552 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 + + ++ ++ +P++R + +GI A + + S +L+ ++ + + Sbjct: 553 MGNKLAEKVVAAIAKSQSRPWSRVLYGLGIRHVGSVNAQVLTTAFPSVERLMAASAEDIE 612 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + G G A+ +++W + L L+A + + Sbjct: 613 AVHGIGPEIAQSIVQWFQTPANHSLIEQLSAAGVQLAQ 650 >UniRef50_A9A0L9 DNA ligase n=9 Tax=cellular organisms RepID=DNLJ_DESOH Length = 682 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 121/592 (20%), Positives = 205/592 (34%), Gaps = 56/592 (9%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 + A+E ++ L+ ++ + + Y+ + E+ D YD+L L + + S Sbjct: 4 TLDKSEAKERVTFLRNELHRHNHLYYIKDAPEISDAEYDRLFRELAELEALHPDLADPAS 63 Query: 78 EPRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVD 126 V PP V + + L + +PK+D Sbjct: 64 PTARVGAPPTGDLATVTRTIPMLSISNAFADEELFKFDERVRRSLQTGDPVTYLAEPKLD 123 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP----LANSTLQGEIF 182 G AV LVY G+L A +RG+G+ GE T I +VP ++G ++GE+ Sbjct: 124 GTAVELVYEKGRLVMAATRGDGVTGEVITPNARTIGSVPLHLTGDAVPMPNLLEVRGEVV 183 Query: 183 LQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP-----DG 228 + +EG + NAR AG + + D T L + + D Sbjct: 184 MTKEGFEKLNALRLERDEPLFANARNAAAGSLRQLDSRVTASRPLTLIAYGIGRFSEIDA 243 Query: 229 PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKE 286 + + LA GF ++ R + V E + LP+ DG+VV+ + Sbjct: 244 ISTQHEIVTRLADFGFKTN-SHVRWDLDIKGVIDFYRFLEGIRPSLPYDIDGMVVKVDRL 302 Query: 287 PES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 W++A+K+ + + AI VG++G ++ VA L PV + V Sbjct: 303 DFQRTLGATSRSPRWVIAYKFAASQETTRLVAIDVQVGRTGALTPVALLEPVTIGGVTVS 362 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS--- 399 R + + DI GD +LV AG IP + V+ R T P Sbjct: 363 RATLHNEDEIARKDIRVGDAVLVQRAGDVIPEVVQVITGRRTGNETPFQMPATCPVCGTP 422 Query: 400 -------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 + C Q R+ AK +DG+G+ L Sbjct: 423 VVREPSEAVTRCVNAACPAQVKERIKHFAAKGAFDIDGLGDKLVDQLVDRGMIASYADLF 482 Query: 453 LLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSW 509 L E L++ + + L +R F ++ +G+ A L A Sbjct: 483 TLRVEDLESLDRMGFKSAQNLVAAIEKSRHITFDAFLYGLGMRHVGAHVATLLARAFPGI 542 Query: 510 SQLLFSTEQ-FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 QL + + G G A V + N + ++ L + P Sbjct: 543 DQLAEAALAGQLNSIDGIGGVIAESVKNFFSNPENRQTVDSLINHGVALQFP 594 >UniRef50_A5V1U3 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_ROSS1 Length = 726 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 123/599 (20%), Positives = 219/599 (36%), Gaps = 68/599 (11%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + + L++QI+ + Y+ + + D YD L L + S Sbjct: 1 MNNDHLTRRVEALREQIRYHNYRYYVLDEPVISDAEYDALMRELRALEAAHPELVTPDSP 60 Query: 79 PRDVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVDG 127 + V PP V H V + D+ + W V+PK+DG Sbjct: 61 TQRVGAPPGEQFAKVQHVVPMLSLANASDEAEVRAWYDRVVRLLGNDARVAFVVEPKIDG 120 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV-----------------SG 170 +AVTL+YR+G L + +RG+G GED T + I +P + + Sbjct: 121 LAVTLIYRNGILVRGATRGDGETGEDVTANLRTIPGIPLRLGAFASNPEGQTNGAPVQAV 180 Query: 171 PLANSTLQGEIFLQREGHIQQQMGGI--------NARAKVAGLMMRQDDSDTLNS-LGVF 221 ++GE++++ ++ N R AG + ++D + T L F Sbjct: 181 IPPLIEVRGEVYMRIADFLRLNEQLAASGEKVAANPRNAAAGSLRQKDPAITARRPLRFF 240 Query: 222 VWAWPDGP----QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFV 275 + Q + L L T GF + + R + D+ EW + EL + Sbjct: 241 AYGIGQIEGVQVQTQWETLNLLRTLGFPVNRDARRF-ERLDDALAYCREWMTRRDELEYE 299 Query: 276 TDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DGVV++ + + W +A+K+ V+ + I VG++G I+ A + Sbjct: 300 VDGVVIKIDSLAQQAQLGVVGRDPRWAIAFKFPAREAVSRLIDIVVNVGRTGVITPNAVI 359 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP--- 390 PV + V+ ++ + E DI GD ++V AG IP I + + ++ Sbjct: 360 EPVNIGGVTVRNASLHNADYIAERDIRIGDYVIVKRAGDVIPYIVGPIVARRDGSERPWQ 419 Query: 391 ---------TPPENRFNSLTCYFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALH 440 TP E + + C Q R+ ++ + + GIGE + Sbjct: 420 MPATCPACGTPLERAEGEVAYRCPNFGICPAQITRRIEHFVSRGAMDIAGIGEKQVQLFV 479 Query: 441 QTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR-- 498 + + + LTP+ N G + A L ++ +P R ++ +GI Sbjct: 480 ERGWVQDVADLYTLTPDHFANVEGYGPKRVANLLSAIAGSKNRPLHRLIVGLGIRYVGEV 539 Query: 499 -AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 A + A S L ++ L G G A V + + K L + L + Sbjct: 540 VAQILADHFGSLDALAAASADEIDALEGIGPAIAASVAAYFARPESKALIAKLKRAGVR 598 >UniRef50_C1XJW9 DNA ligase n=3 Tax=Thermaceae RepID=C1XJW9_MEIRU Length = 666 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 115/576 (19%), Positives = 222/576 (38%), Gaps = 49/576 (8%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 ++ I L++ I+ + Y+ K E+ D YD+L L + S + V Sbjct: 5 KQRIMELRELIRYHNYRYYVLDKPEISDAEYDRLLQELRALEEAHPELIIPDSPTQTVGS 64 Query: 85 ---PPLNGAVMHPVAHTGVRKMVDKNALSLWM---------RERSDLWVQPKVDGVAVTL 132 V HP + ++ ++ + E + ++ K+DG++V L Sbjct: 65 AILETPFTPVPHPTRMYSLGNAFSQDDIADFEASINRFLGREESREYVLEYKIDGLSVNL 124 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 +Y +G + ++RG+GL GED T + I +P+ + PL + ++GEI+L + ++ Sbjct: 125 IYEEGVFRQGLTRGDGLTGEDVTPNLLAIPDIPRQLPQPL-DLEVRGEIYLPIQTFLELN 183 Query: 193 M--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQLMSDRLKEL 239 N R AG + ++D + + L + G + L++L Sbjct: 184 TQLEEAGEPPFKNPRNAAAGSLRQKDPRISASRGLRGLFYGVGRPESLGVGTQQELLEKL 243 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPE--SRHWLPG 295 GF++ Y + V+ + + + + LPF DGV V+ + Sbjct: 244 GQLGFSVDPHY-QVVRGVEGIEQGYQAMLAARKSLPFEADGVTVKLNNLSLWSELGYTAK 302 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 + +A+K+ + V + F VG++G+++ VA L PV LD V RV + + Q Sbjct: 303 TPRFAIAYKFPAEEKTTRVLRVIFQVGRTGRVTPVAELEPVFLDGSTVSRVTLHNESYVQ 362 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK----PTPPENRFNSLTC-----YFAS 406 E + GD +LV +G IP + VV PT +L + Sbjct: 363 ELGLRIGDTVLVHKSGGVIPEVLRVVTEAPRGHAPVEWPTHCPECGTALELSGKIHLCPN 422 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIA 466 +C + + +++ + + G+GE L +T L E + A Sbjct: 423 PLCPAKAFEAIRHFASRRAMDIQGLGEKLIEQLLETGLVRDAADLYNLKKEDIAALERKA 482 Query: 467 KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQL 523 + + L Q ++ + R + A+GIP A A +L +T + + Sbjct: 483 EKSAQNLIEQIEASKSRGLERLLFALGIPQVGESTARALAKRFGHLDSILKATVEELDAV 542 Query: 524 PGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 P A+ + + +++ L A + Sbjct: 543 PDIAETTAQAIHQALARPEMQSFIERLRAAGLVFEA 578 >UniRef50_C4GER0 DNA ligase n=2 Tax=Proteobacteria RepID=C4GER0_9NEIS Length = 797 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 125/607 (20%), Positives = 222/607 (36%), Gaps = 79/607 (13%) Query: 23 PAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------ 76 P P +AQ++I L Q+ Q+ +Y+ V D YD+L L + + Sbjct: 17 PIM-PQQAQQKIQTLTAQLNQYAHEYYTLDAPTVPDSEYDRLYRELEALETEYPQFRLPE 75 Query: 77 SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDK----------NALSLWMRE--------R 116 S V L+G V+H V + + + Sbjct: 76 SPTNRVGGAVLDGFETVIHAVPMLSLANAFSPRDDEAGTFDHAEMRAFDERVCKDLGAAH 135 Query: 117 SDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LAN 174 ++ ++PK DG+A++L+Y++G L +A +RG+G GED T+ + + +P + G Sbjct: 136 TEYIIEPKFDGLAISLLYQNGILIQAATRGDGTTGEDVTENIKTVRNIPLRLHGDEVPDL 195 Query: 175 STLQGEIFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAW 225 ++GE+ + + N R AG + + + + T L F + Sbjct: 196 IEVRGEVLMLKADFAALNARQLDAGQKPFANPRNAAAGSLRQLNSAITAQRKLHFFGYGI 255 Query: 226 PD------GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTD 277 P+ + ++ LA GF+ Q R N EV + +LP+ D Sbjct: 256 ARLSTAFRQPENHAQEIELLARLGFSEPQAQIRVCANIQEVLDFYETMAQQRPQLPYEID 315 Query: 278 GVVVRAAKE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 G+VV+ + ++ W +A K+ + V+AI VG++G I+ VA L P Sbjct: 316 GMVVKVNDLRQQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGSITPVARLKP 375 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE--------- 386 V + V + + D+ GD ++V AG IP + VV Sbjct: 376 VFVGGVTVTNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVVLERRPMRNVDLLGE 435 Query: 387 ---------RTKPTPPENR-------FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDG 430 R T P ++ VC+ Q L+ +++ + + G Sbjct: 436 RQEPQHPAFRLPETCPVCGSAVEREIGEAVARCTGGIVCKAQRAQGLIHFASRKAMDIVG 495 Query: 431 IGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI---AKSKSAQLWHQFNLARKQPFTR 487 +G+ AL + L +LQ A + + +R+ P R Sbjct: 496 LGDKQIEALVEQDVLHSFADIYQLDIAKLQTIKDSKSGANKWTHNILDAVAASRQPPLAR 555 Query: 488 WVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIK 544 ++ A+GI A A+ W + + E LP GS A + + + + Sbjct: 556 FLFALGIRHVGESTAKQLAAAFGDWDTVRRAPEPVLACLPDIGSVVAHSIAHFFRLPEQQ 615 Query: 545 KLGSWLA 551 KL L Sbjct: 616 KLLDDLL 622 >UniRef50_B5YIF8 DNA ligase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=DNLJ_THEYD Length = 670 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 131/585 (22%), Positives = 224/585 (38%), Gaps = 52/585 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRD 81 P ++EI +L +++ + Y+ + D YD + RL + + +G S + Sbjct: 5 PEDIKKEIEKLVKELNYHNYRYYVLDSPVISDEEYDMMLRRLKELEEKWGYILPDSPTQR 64 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKVDGVAV 130 V P H + L + + V+PK DG+AV Sbjct: 65 VGAAPSEKFEKAEHREPMLSLDNAFSIEELRDFDARVKRLLGSSEEVEYTVEPKYDGLAV 124 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG---PLANSTLQGEIFLQREG 187 L Y+DG L KA +RG+G GED TQ + I A+P + G ++GE++L + Sbjct: 125 ELSYKDGLLYKASTRGDGYVGEDITQNIKTIKAIPLRIEGVDKIPEEIDIRGEVYLNIDE 184 Query: 188 HIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSD 234 + N R +G + + D S T L + + + + Sbjct: 185 FERINKERIEKGEPVFANPRNAASGSVRQLDPSITASRRLYMSCYGIGYVKGIEFKSQIE 244 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--R 290 ++ L F + Y + K +EV E + PF TDG VV+ Sbjct: 245 FIEWLKKGRFPV-PAYVKLAKGIEEVIEAIKEIEKLRQGYPFETDGAVVKVNSFELQRKL 303 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 + W +A+KY + ++K I +VG++G I+ VA L PV + V R + + Sbjct: 304 GTKTREPRWAIAYKYPAHQGITKLKDILASVGRTGVITPVAVLEPVKIGGVTVSRSTLHN 363 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS--------- 399 + DI GD ++V AG+ IP I VV R E + PE+ Sbjct: 364 WDEVERKDIRVGDYVIVERAGEVIPHIIGVVKDRRTGEEKEVKIPEHCPVCGSKTVREPG 423 Query: 400 -LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 + + C Q R+ +++ + ++G+G+ LH +H L E Sbjct: 424 EVAVKCINFNCPAQVEERIKHFASRRAMNIEGLGDKTVELLHNKGIIKHFVDLYKLRQED 483 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRA---ALNASDERSWSQLLFS 515 ++ PG A+ S +L ++K +R + A+GI L A R L Sbjct: 484 IKGLPGFAELSSKKLIEAIAKSKKTTLSRLLYALGISQVGEYASKLLAQHFRKLEDLYHI 543 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + Q+P G A+ + ++ N + K L + P Sbjct: 544 KAEKLVQIPQIGEKTAKTIEQFFNNEENLKAIEELKRMGLKVENP 588 >UniRef50_Q0F129 DNA ligase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F129_9PROT Length = 670 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 124/586 (21%), Positives = 211/586 (36%), Gaps = 54/586 (9%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 A I L+ Q+++ + Y+ + D YD+L L + G S R Sbjct: 4 KATLTARIEHLRSQLREHNYRYYILDAPVISDAEYDRLLRELESLEAELGEPVPADSPTR 63 Query: 81 DVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAV 130 V PP + H A + + ++R + V+PKVDG+AV Sbjct: 64 TVGAPPSQVFTTRTHGEALLSLANAFSAGEVEAFVRRIGETLPATTLSFIVEPKVDGLAV 123 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-----GPLANSTLQGEIFLQR 185 L Y G L A +RG+G GED T V I +P + ++GEI++ R Sbjct: 124 NLRYEQGSLTIAATRGDGTTGEDVTDNVRTIGDIPWQLKQVDGIELPTVLEVRGEIYMSR 183 Query: 186 EGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG----PQLM 232 E N R AG + + D T LG F + G Sbjct: 184 EAFAALNARQDAEGAQPFANPRNAAAGSLRQLDARVTASRRLGFFAYGAGLGGRAIASSQ 243 Query: 233 SDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES- 289 S L+ LA GF + +T + + + + + ++P+ DGVV + + Sbjct: 244 SQLLERLAGFGFAVQKTA--CADDLEGLLATYQQLQQQRPDMPYEIDGVVYKLDEFALQD 301 Query: 290 -RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNI 348 + W +A K+ VK I + VG++G I+ VA + PV + V R + Sbjct: 302 RMGAVARSPRWAIAHKFPAEEVTTTVKDIIWQVGRTGVITPVADMEPVAVGGVVVSRATL 361 Query: 349 GSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS--------- 399 ++ + + G +++V AG IP + V A+ P P Sbjct: 362 HNIDELKRKQVYAGARVIVRRAGDVIPEVVRAVDVDAQAMMPKAPAQCPVCGASLFRLEG 421 Query: 400 --LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 C Q RL ++ + ++G+G+ L I Sbjct: 422 EVAIRCSGGLSCSAQLTERLRHFVSRGAMDIEGMGDKLIARLVDEGCLNDIADLYEFDYA 481 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLF 514 L G+ + K L ++++P R++ A+GI AA A+ L+ Sbjct: 482 SLHEWQGMGEKKITNLQLSIERSKQRPLARFLHALGIRHVGSATAAALATHFADLELLMQ 541 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + E+ +P G A ++ + + + L A +T P Sbjct: 542 ADEEALLAVPDVGPEVAGSILSFFREQHNRDVIDRLLAAGVTPEAP 587 >UniRef50_Q02K12 DNA ligase n=29 Tax=Bacteria RepID=DNLJ_PSEAB Length = 794 Score = 639 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 118/610 (19%), Positives = 221/610 (36%), Gaps = 77/610 (12%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 A E I++L+ ++ + Y+ + + D YD+L L + + S Sbjct: 3 DTQAAAERIAQLRTELDTHNYRYYVLDEPSIPDAEYDRLFRELQALETEYPQLLTPDSPT 62 Query: 80 RDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRE-------------------RSD 118 + V P G V H + + ++ L + R + Sbjct: 63 QRVSGTPASAFGEVRHEIPMLSLGNAFEEQDLLDFDRRVREGLADLLPGGDLLGGGAEVE 122 Query: 119 LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANST 176 +PK+DG+AV+L+Y G+L + +RG+G GED T V I VP + G Sbjct: 123 YSCEPKLDGLAVSLLYERGQLVRGATRGDGSTGEDITSNVRTIRNVPLKLHGEGWPEILE 182 Query: 177 LQGEIFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD 227 ++GE+F+ + G N R AG + + D T L + + Sbjct: 183 VRGEVFMSKAGFEALNAKAVETGGKTFANPRNAAAGSLRQLDSKITASRPLEFCAYGFGQ 242 Query: 228 G----PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVV 281 P L+ G +++ R VK A ++ + L + DGVV Sbjct: 243 VSGTLPDTQVGILEAFRGWGIPISREL-RLVKGAQACRDYYDDIGRRRDALAYEIDGVVF 301 Query: 282 RAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 + + + + W +A K+ ++ E+ ++F VG++G ++ VA L PV + Sbjct: 302 KVNRIAFQRELGFRAREPRWAIAHKFPAREELTELLGVEFQVGRTGAVTPVARLKPVQVA 361 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT--KPTPPENRF 397 V + ++ + GD +++ AG IP++ VV PE+ Sbjct: 362 GVTVSNATLHNMDEVARLGLRIGDTVVIRRAGDVIPQVMQVVLERRPADAQAIEVPEHCP 421 Query: 398 NS-----------------------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEA 434 + CQ Q ++ +++ + +DG+G+ Sbjct: 422 VCGSAVERTQLVKRSKGKESISEGAIYRCVGRLSCQAQLKQAIIHFVSRRAMDIDGLGDK 481 Query: 435 GWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 L LT EQ+ G A+ + L +RK R++ A+GI Sbjct: 482 IVEQLVDRGLVASPADLYTLTYEQVFELEGFAELSTNNLLAAIADSRKPSLARFIFALGI 541 Query: 495 PLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLA 551 P A L A S ++ + + LP G+ A ++ + + +++ + L Sbjct: 542 PDVGEETAKLLARSLGSLERIGKALPEVLTYLPDVGAEVAYEIHNFFADEHNRQVIAQLR 601 Query: 552 --AQQITGFE 559 + E Sbjct: 602 DAEHGVQLQE 611 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/110 (10%), Positives = 28/110 (25%), Gaps = 14/110 (12%) Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQ 511 E + + A ++ + IP A AS S Sbjct: 602 DAEHGVQLQEEGEVAA-------EFAACASLAGFIDKLNIPFIAATGAEKLASRFGSLDG 654 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKK---LGS-WLAAQQITG 557 ++ + +Q+ A+ + ++ + + L + Sbjct: 655 IIRADWLDLRQVERLPERAAKSLRDFFDEPANVQRALAIEAQLREFGMHW 704 >UniRef50_C1A6H2 DNA ligase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=DNLJ_GEMAT Length = 689 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 133/590 (22%), Positives = 224/590 (37%), Gaps = 56/590 (9%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 P + E L++Q+ +Y+ + + D YD+L L + + S Sbjct: 8 PPHQTVERARELREQLGTAQHEYYVLDRPTLSDQEYDRLFRELQGIEAEYPTLCTEDSPT 67 Query: 80 RDVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMR----------ERSDLWVQPKVDG 127 R V P H V + D + L + + S V+ K+DG Sbjct: 68 RRVGAPVQSAFSPHRHLVRMLSLDNAFDLSELEDFEQSLKRVVGDAIHTSGYTVELKIDG 127 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQR 185 AV L YR+G L A +RG+G GED T V I VP + G ++GE++L Sbjct: 128 AAVALTYREGVLVTAATRGDGTDGEDVTANVRTIRGVPLRLHGDNHPPLMEVRGEVYLPF 187 Query: 186 EGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWA--WPDG---PQL 231 G + +N R AG M + D ++T L F +A PDG + Sbjct: 188 AGFERMNEARVAAGEPVYVNPRNAAAGSMRQLDSANTAARPLRFFGYAAVLPDGSAPARS 247 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARV---RNEWWKAELPFVTDGVVVRAAKEPE 288 + L++L+ G + + + E +A L F DG VV+ Sbjct: 248 QWELLEQLSAWGVPVAP-HRQRCHTIQEAEAWATVVEHETRATLGFAIDGGVVKVNDMAL 306 Query: 289 S--RHWLP-GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 W VA K+ P + +++ I VG++G ++ A L PV + V Sbjct: 307 QDELGIRADRTPRWGVARKFAPDMALTKLRRIDVNVGRTGVLTPFAVLEPVDVGGATVTF 366 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK-----PTPPENR---- 396 ++ + + D+ GD + V AG IP + V + ++ PT Sbjct: 367 ASLHNADQIAAKDLREGDTVQVVRAGDVIPYVLGPVPEQRDGSQQPWSMPTQCPRCNTPV 426 Query: 397 ---FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + + Y + C + + LV +K L +DG+ A + L + Sbjct: 427 ERYGDDVAVYCPNVACPGRQLEGLVHFSSKDALDIDGLSYARIQQLLDAGLVHDVADLFD 486 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWS 510 +T +QL + AK + L A++QP +R + +GI A L + S Sbjct: 487 ITVDQLTSLERFAKKSAENLVAAIAAAKQQPLSRLMFGLGIRHVGAQAAQLLSRQYGSLD 546 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 L+ +T + + G GS A+ V + + + L L A+ + EP Sbjct: 547 ALMNATAEQLGAVRGIGSIIAQSVASYFADPTTRALMERLRARGLRFDEP 596 >UniRef50_B2KE31 DNA ligase n=2 Tax=Elusimicrobia RepID=DNLJ_ELUMP Length = 656 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 118/578 (20%), Positives = 229/578 (39%), Gaps = 48/578 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 + ++EI L+ +I ++ Y+ +E+ D YD L ARL + S + Sbjct: 2 DKIKKEIEDLRSKINYHNNLYYNLDNAEISDAEYDGLYARLKFLEAMNPDYADAASPTQK 61 Query: 82 VMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGVAVT 131 + + +V H + + W ++ + K+DGV+ + Sbjct: 62 IGGAASRVFTSVTHASQMMSLDNTYSSEEVLRWHERCVKSLGHGNFEMVAEAKIDGVSCS 121 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ 191 L Y G L A +RG+G GED T + I +P +S ++GEI++++ + Sbjct: 122 LTYEGGVLTVAATRGDGKTGEDVTANIKTIKTIPHNISFK-NKIEIRGEIYIEKADLKRL 180 Query: 192 QMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG---PQLMSDRLKEL 239 N R AG + +++ + L F ++ G + ++ + Sbjct: 181 NEIQENEGENIFANTRNAAAGSIRQKNAEISASRPLKFFAHSFGYGDVDVKGFAEFMDLC 240 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPES--RHWLPG 295 + GF++T R + +E+ E +A LP+ DG+VV+ E Sbjct: 241 KSWGFSVTPNRIRT-ADINEITSFYKRFEELRAGLPYDVDGIVVKINSFAEQKILGVTAK 299 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A+KY+P V I F+VG++G I+ VA L PV + + + + + Sbjct: 300 SPRWAIAFKYKPPQGKTVVNKIIFSVGRTGIITPVAELEPVAVAGVIISNATLHNFDEIK 359 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS----------LTCYFA 405 + GD ++V AG+ IP+I +VV G + P+N + + Sbjct: 360 RLGVKEGDTVIVERAGEVIPKILNVVKDGG-GNEVKAPKNCPSCGSKVYRYEDEVAIRCI 418 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI 465 + C Q L+ ++ + +DG GEA + + + L EQL Sbjct: 419 NPACPAQIKGHLLHFVSRAAMDIDGFGEAVVEQVVEKKYVKDFADIYNLKAEQLLTLDLF 478 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFSTEQFWQQ 522 K L ++K+ +R + A GI + A+ +L ++ + +Q+ Sbjct: 479 KDKKVNNLLLAVEASKKRSLSRVLYAFGIRHVGQKTGEILANHFEDIENMLAASLEDFQK 538 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + G + V ++ ++A+ K+ + L + +P Sbjct: 539 INEIGPVVGQSVYDFMQSAKGKEEIARLKTAGVNFTQP 576 >UniRef50_D1Y3B8 DNA ligase (NAD(+)) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3B8_9BACT Length = 681 Score = 636 bits (1641), Expect = 0.0, Method: Composition-based stats. Identities = 122/575 (21%), Positives = 231/575 (40%), Gaps = 50/575 (8%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 + L ++ + Y+ E+ED YD L + Q++R S + V Sbjct: 10 DRYYWLVDELNRHGRLYYVLDAPEIEDDEYDALMREMLQFEREHPDLIRDDSPSKRVGGA 69 Query: 86 PLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYR 135 L+ V H + + KN L W++ ++ + K+DG+AV+L++ Sbjct: 70 VLDAFEKVTHAKPMLSLEDVFSKNELHDWLQRAAEGVGQPWIPWCCELKIDGLAVSLIFE 129 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGHIQQQMG 194 DGK +A +RG+G+ GED T+ + + +P + G + L+GE+++ ++G Q Sbjct: 130 DGKFVQASTRGDGVVGEDVTENLKTVKDLPLRLLGDVPGHLELRGEVYMGKDGFAQLNAA 189 Query: 195 --------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQLMSDRLKELAT 241 N R AG + + D S L +F + D G S+ L+ L Sbjct: 190 REEAGLPLFANPRNAAAGSLRQLDTSVAAKRNLRLFTYYVQDAESYGLHSQSEILEWLKA 249 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPE--SRHWLPGQA 297 G + + + R + E W + LP+ TDG V +A Sbjct: 250 RGLPVQKAWRR-AETETEALDFLERWSGERFSLPYATDGAVFKADATEYWTVLGNNVKTP 308 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 W VA+KY P + ++++I+ ++G++G ++ VA+L PV+L V+R ++ + Q Sbjct: 309 RWAVAYKYPPEERKTKLESIEISLGRTGVLTPVANLEPVLLSGTVVKRASLHNDEEIQRK 368 Query: 358 DIAPGDQILVSLAGQGIPRIDD--VVWRGAERTKPTPPENRFNS----------LTCYFA 405 DI GD++ V AG+ IP I V R P + Sbjct: 369 DIRVGDRVWVRKAGEIIPEIVRVDVASRTGTEEPFAMPATCPVCGAAVAKLPGEVALRCL 428 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI 465 + C Q L+ ++Q + + G+G+ L ++ ++ L E L + Sbjct: 429 NRSCPAQLTQGLIHFASRQGMNIQGLGDRLAEQLVRSGLVKNFSDLYALRVEPLVRLDRM 488 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQFWQQ 522 + + +L ++++P + A+GI A + A S ++ + E+ Sbjct: 489 GEKSAGKLLQAIAKSKERPLKFLITALGIREVGAGVAAELAKRFSSLDEIAAADEERLAA 548 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + G G A + + ++L L ++ Sbjct: 549 VEGVGPVIAGSIKTFFGEEHNRRLIDGLREAGVSM 583 >UniRef50_C0DZ27 DNA ligase n=2 Tax=Proteobacteria RepID=C0DZ27_EIKCO Length = 778 Score = 636 bits (1640), Expect = 0.0, Method: Composition-based stats. Identities = 122/601 (20%), Positives = 212/601 (35%), Gaps = 78/601 (12%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 Q+ I L Q + ++ +Y+ V D YD+L L + S + V Sbjct: 5 QQRIRTLVQTLNRYAHEYYTLDAPSVPDAEYDRLYRELEALEAEHPQFRLPESPTQRVGG 64 Query: 85 PPLNG--AVMHPVAHTGVRKMVDK----------NALSLWMRE--------RSDLWVQPK 124 L+G V+H V + + + + +PK Sbjct: 65 AVLDGFETVVHAVPMLSLNNAFSPRDDETGAFDHAEFLAFDERVCKELGVAQVEYAAEPK 124 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIF 182 DG+AV+L+Y++G L +A +RG+G GE+ T+ + + +P + G A ++GE+ Sbjct: 125 FDGLAVSLLYQNGILVQAATRGDGTTGENVTENIKTVRNIPLRLHGEKQPALLEVRGEVL 184 Query: 183 LQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG----- 228 + + N R AG + + D T L F + Sbjct: 185 MLKADFAALNQRQLEAGQKPFANPRNAAAGSLRQLDSKITAQRKLHFFAYGIAQLSGVER 244 Query: 229 -PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAK 285 P+ + L L GF+L + Y A A V R + LP+ DG+VV+ Sbjct: 245 LPESHMEELALLHEIGFSLPKGYFGAYTGAAAVLREYERLAEHRPRLPYEIDGMVVKVNS 304 Query: 286 EPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 E ++ W +A K+ + V+AI VG++G ++ VA LAPV + V Sbjct: 305 LAEQQQLGFVSRAPRWAIAHKFPAEEALTTVEAIDVQVGRTGAVTPVARLAPVFVGGVTV 364 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE----------------- 386 + + D+ GD ++V AG IP + V+ Sbjct: 365 TNATLHNQDEVARKDVRVGDTVVVRRAGDVIPEVVRVLLERRPMQPVDLLGEQMEPLHEP 424 Query: 387 -RTKPTPPENR-------FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRA 438 R T P ++ +CQ Q L+ +++ + + G+G+ A Sbjct: 425 FRLPETCPVCGSAVEREAGEAVARCTGGMLCQAQRAQGLIHFASRKAMDIAGLGDKQIEA 484 Query: 439 LHQTHRFEHIFSWLLLTPEQLQNTPG---IAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L L +LQ A + + +R P R++ A+GI Sbjct: 485 LVAADVLHSFADIYRLDIAKLQTIKDGKSAATKWAQNILDSIAQSRTPPLARFLFALGIR 544 Query: 496 LTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 A A+ + + + E LP GS A + + +K+ L Sbjct: 545 HVGESTAKQLAAAFGNLDTVRRAPEPILACLPDIGSVVAHAIAHYFRQPAQQKMLDDLLQ 604 Query: 553 Q 553 Sbjct: 605 H 605 >UniRef50_Q04GN6 DNA ligase n=106 Tax=cellular organisms RepID=DNLJ_OENOB Length = 684 Score = 636 bits (1640), Expect = 0.0, Method: Composition-based stats. Identities = 129/587 (21%), Positives = 232/587 (39%), Gaps = 54/587 (9%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------ 77 + +AQ EI L ++ +W +Y++E VED VYD ARL ++ + S Sbjct: 12 DLTFTQAQAEIRDLSDELTKWGREYYEEDNPSVEDYVYDAHYARLVALEKAYPSLAMPDS 71 Query: 78 EPRDVMMPPLNG-------AVMHPVAHTGVRKMVDKNALSLWM-------RERSDLWVQP 123 + V V+HPV + + L W + ++ Sbjct: 72 PTQHVAAGNQTKNDSRGLQKVVHPVPMLSLGDVFSIQELLDWDLVTTKNAGSQQKYNLEL 131 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DG+A++L Y +G+L +A +RG+G GE+ T V I+ +P+ ++ PL ++GEI++ Sbjct: 132 KIDGLAISLRYENGRLIQASTRGDGSIGENVTDNVKTITEIPKVLNEPLT-IEVRGEIYM 190 Query: 184 QREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQ 230 ++E N R AG + + D T L F++ G Sbjct: 191 RKEAFADLNQQRDEEGKTIFANPRNAAAGSLRQLDPKITAKRHLSSFIYYTAQNDVLGVN 250 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPE 288 SD L+ GF + + + + EV +E+ + LP+ DGVVV+ Sbjct: 251 TQSDVLERFRQLGFPVNSS-NKVIDRMTEVKDYIDEYTIKRDNLPYGIDGVVVKVNDLDV 309 Query: 289 S--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 W +A+K+ P + V+ I + VG++G ++ A + PV L KV+R Sbjct: 310 ENELGNTVKIPRWSIAYKFPPEEALTVVRDITWTVGRTGVVTPTAIMDPVFLAGTKVKRA 369 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT------KPTPPENRF--- 397 ++ + QE D+ GD + + AG IP + V+ + P + Sbjct: 370 SLHNPDYLQEKDVRIGDTVTLHKAGDIIPEVGQVILKKRPADAQAYPIPVYCPSCKSKLV 429 Query: 398 ---NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 + + C Q L+ ++ + +DG+G L + I L Sbjct: 430 HVQGEVALRCINPECPAQIKEGLIHFASRNAMNIDGLGPRVVEQLLSKNLIRKISDLYAL 489 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQ 511 T QL A S L + +R+ R + A+GI A A+ ++ Sbjct: 490 TESQLTTLDKFADLSSKNLIQAIDRSRQNSVERLITALGIRGVGAKAAKVLAAHFKNLRN 549 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 L + + ++ G G A + ++ + + L + L Q+ Sbjct: 550 LQNAGAEEIAEIDGVGQVMADAIRQYFNSESVASLINELENFQVNFD 596 >UniRef50_Q2S459 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_SALRD Length = 690 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 112/573 (19%), Positives = 216/573 (37%), Gaps = 53/573 (9%) Query: 41 IKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLN--GAVM 92 ++ + Y+ V D YD+L +L + + S V P + G V Sbjct: 32 LRHHNYRYYVLDAPVVSDAEYDRLFQQLQTLEAEYPVLQTPDSPTHQVGGPVRDELGTVT 91 Query: 93 HPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYRDGKLNKAIS 144 HP ++ + +++ + + + +PK DG+AV L+Y DG+L + + Sbjct: 92 HPAPMLSLKAVYEEDEVRNFAETCREELGRETVTYIAEPKFDGLAVELIYEDGRLVQGAT 151 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGP----LANSTLQGEIFLQREGH--------IQQQ 192 RG+G GE+ T V I VP + ++GE +++++ + + Sbjct: 152 RGDGETGEEITANVKTIKGVPLRLRDDARPVPDRLVVRGEAYMRKDEFNAFNRRREEEGK 211 Query: 193 MGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAW----PDGPQLMSDRLKELATAGFTLT 247 N R AG + + D + T L ++ + ++ L+ L G + Sbjct: 212 KVFANPRNAAAGSLRQLDSNITARRPLRIYFYEIAPVDGRDFATHAEVLEALPEWGLRVC 271 Query: 248 QTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAW 303 + + R D + +LP+ DG+V++ E+ W A+ Sbjct: 272 EDHIRRCDGIDAALAHHAALVDRRDDLPYEIDGLVIKVNDFDGHETLGVRDRDPRWAAAY 331 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 K+ P ++ + VG++G+I+ VA LAPV + +V R ++ + DI GD Sbjct: 332 KFPPRRATTSIEDLFVQVGRTGRITPVAVLAPVEVGGVEVTRASLHNQNEIDRKDIRIGD 391 Query: 364 QILVSLAGQGIPRIDDVVWRGAERTK-----PTPPENRFNSLTC--------YFASDVCQ 410 +L+ AG IP++ V+ + T+ P + + C Sbjct: 392 TVLIERAGDVIPQVVKVIEDERDGTEAPYHIPDACPVCGSEVVLSDDKKQAFCTGGMTCP 451 Query: 411 EQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKS 470 QF RL +++ ++G+G+ L + I L L A + Sbjct: 452 AQFRERLKHYASREATDIEGLGDKRAEQLIDAGLIQTISDLYELEKADLLQLERYADKSA 511 Query: 471 AQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTG 527 L + + +Q R++ A+GIPL A L A + L+ + E + G Sbjct: 512 QNLIDEIEASLEQDLDRFLYALGIPLVGSATARLLAQHFDTLDALVDADEDALTTIDDIG 571 Query: 528 SGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 A + + + + + + +T P Sbjct: 572 PEVAHSIATFFADDANRGVIDEMRDAGLTLTNP 604 >UniRef50_A5FRL4 DNA ligase n=5 Tax=Dehalococcoides RepID=DNLJ_DEHSB Length = 680 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 121/586 (20%), Positives = 217/586 (37%), Gaps = 61/586 (10%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPP 86 E+ L+++I + + Y+ + E+ D YD L RL + + S + V P Sbjct: 10 EVENLRREINRHNQLYYVQDNPEISDAQYDTLIRRLKELEEAHPELVTPDSPTQRVGAEP 69 Query: 87 LN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW--------VQPKVDGVAVTLVYRD 136 L G V HP + L W + L +PK+DG+AV L YR+ Sbjct: 70 LKAFGIVNHPYPLLSLANAFSDTELEAWYQRVKKLLGNIPFQIDCEPKMDGLAVALTYRN 129 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTV-SGPLANSTLQGEIFLQREGHIQQQMG- 194 GK +RG+G +GE+ T+ + I ++P ++GE++L + G + Sbjct: 130 GKFATGATRGDGFQGENITRNLRTIHSIPLNAEPNAPPVFEVRGEVYLSKNGFAKLNRER 189 Query: 195 -------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG-----PQLMSDRLKELAT 241 N R AG + + D S T L +F++A P L + Sbjct: 190 ADKGLPLFANPRNAAAGSLRQLDPSVTAERPLDIFIYALGYSEDSLLPDSHWQILDYFSK 249 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESRHWLPGQA 297 GF + R V +E + +A LP+ DGVV + + + Sbjct: 250 IGFRINP-LNRLVNTLEEAKEYYRQMAANRASLPYEADGVVFKVDSVSLQHRLGDVGREP 308 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 W +A+K+ + +K I +VG++G ++ A L PV + V++ + + Sbjct: 309 RWAIAYKFPAEQVMTRLKKIGISVGRTGTLNPFAVLEPVNVGGVVVKQAALHNEDDILRK 368 Query: 358 DIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKP--------------TPPENRFNSLT 401 DI GD +++ AG+ IP + V R E P Sbjct: 369 DIREGDTVIIQRAGEVIPEVVAPVLSKRNPESKPFRMEESLFNPNLNRTACPVCGGEIYR 428 Query: 402 ------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 Y A+ C QF +L ++ + + GIGE+ L Q +++ LT Sbjct: 429 PAGEAMHYCANVSCPAQFERQLEHFVSRGAMDIRGIGESLSVILAQQGLVKNVSDLYYLT 488 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 L P + + + + ++ +P R + +G+ A L + + L Sbjct: 489 TADLLQLPRMGEKSADNIIDAIADSKTRPLDRVIFGLGVRHVGNETATLLSRHYGNIWAL 548 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 + Q +P G A ++ + + + L + Sbjct: 549 AKTGLGELQTIPDIGDKIASSIVAYFSEEKNVAVIRRLEEAGVRLT 594 >UniRef50_C9LR65 DNA ligase, NAD-dependent n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR65_9FIRM Length = 669 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 107/583 (18%), Positives = 224/583 (38%), Gaps = 49/583 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 A ++ L+++++ Y+ K E+ D +D+L L ++ + S Sbjct: 1 MVTAEIIKKAEELRKKLRYHSYLYYVLDKPEITDFEFDRLYRSLVDLEKEYPEIVTPDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRER--------SDLWVQPKVDGV 128 + V + + + L + R + + K+DG+ Sbjct: 61 TQRVGGKASDDFRKIPFKKPMLSLANAFSAEELRDFDRRVHGGIGAMPVEYITELKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 ++ L+Y +G L + ++RG+G GED T V I +P + A ++GE+++ R+ Sbjct: 121 SMNLIYENGSLMQGLTRGDGKVGEDVTSNVKTIKTIPLYIENAPAYMEVRGEVYMPRKSF 180 Query: 189 IQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG----PQLMSDR 235 I N R AG + + D T +L F +A D Sbjct: 181 IALNEERDEAGMMPFANCRNAAAGSLRQLDPKVTAARNLDFFAYALGAEEGLDISSQDDL 240 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RH 291 L +L F + Y + + + V EW + EL + TDG+V++ + Sbjct: 241 LLQLKKFHFRVNPHYRKW-DSIEGVITGVREWEKKRRELDYDTDGMVIKVNDFRQQELLG 299 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 +W +A+KY P V +++ I ++G++G ++ A L PV L V+R + ++ Sbjct: 300 ATGKDPKWAIAYKYPPEEAVTKIEKIVVSMGRTGVLTPSADLTPVRLAGTTVKRATLHNL 359 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA--ERTKPTPPENRFNS---------- 399 +E DI GD +++ AG+ IP I V+ + PEN Sbjct: 360 DFIREKDIREGDTVIIYKAGEIIPEIAAVLKEKRNGSEKEFEMPENCPVCGNSIRRIDTE 419 Query: 400 LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + C +L+ ++ + ++G+G A +L + L + L Sbjct: 420 AAFRCINPACGGVVREKLIHFASRDAMDIEGLGPAVVDSLLAYRLVADAADFYALKEDDL 479 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFST 516 + + + +A L ++++ + + +GI L A + ++ + Sbjct: 480 RQIERMGEKSAANLITAIRASKERGLAKLLFGLGIRFLGEKGSELAAHYFHTIDAIMAAD 539 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + ++ G G A+ + ++ + + ++ + L + E Sbjct: 540 VETIEETEGIGKITAKSLYDYFHDEKNIEMINKLKNAGVLMEE 582 >UniRef50_B0VHM5 DNA ligase, NAD-dependent n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHM5_9BACT Length = 667 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 113/587 (19%), Positives = 222/587 (37%), Gaps = 56/587 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSE 78 + + I RL+ +I+ + Y+ K E+ D YD L L + + + S Sbjct: 1 MNKNELKARIDRLRAEIEHHNRLYYTLAKPEISDYEYDMLVKELQELEAQYAEGAVEESP 60 Query: 79 PRDVMMP--PLNGAVMHPVAHTGVRKMVDKNALSLWMRER-------SDLWVQPKVDGVA 129 + V P + H V + + ++ S+ + K+DG + Sbjct: 61 TQKVGSDLTPGAKTIPHKVRMASLENAYSLEEVLAFINRTNNDLGYASEYCAELKIDGFS 120 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 + L Y +G A +RG+GL+GED T+ L+ VP T+ ++GEI++ + + Sbjct: 121 INLYYENGNFIYATTRGDGLEGEDVTENFRLLPDVPFTIDYK-GAIEIRGEIYIPVQDFL 179 Query: 190 QQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP----------DGPQ 230 N R AG + + + L +A + Sbjct: 180 ALNEFRRENELKTFANPRNAAAGSIKLKSREEVKSRHLKALFYALGYYETPLQYKNEIID 239 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVR--NEWWKAELPFVTDGVVVRAAKEPE 288 + L L GF ++ K+ E + E + +P+ DG+V++ + Sbjct: 240 KQTRLLDFLDELGFPTSKRT--LCKHYQEAEKFCLQMEQERYTIPYDIDGIVIKVNSLED 297 Query: 289 S--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 W +W +A+K++P + ++++ F VG++G ++ VA+L PV + V Sbjct: 298 QKKLGWTAKSPKWAIAYKFKPEEKETVLESVSFQVGRTGAVTPVANLKPVFISGSTVSHA 357 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRI--DDVVWRGAERTKPTPPENRFNSLTC-- 402 + + + D+ GD +LV +G+ IP+I +V R P Sbjct: 358 TLHNADEIKRLDLHYGDTVLVVKSGEIIPKILSVNVSKRPVNAKPVIFPATCPVCNAPLQ 417 Query: 403 --------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 Y + C Q +L +++ + + G+G + L +T + + I L Sbjct: 418 RDEDGSINYCPNANCPAQIQRKLEHFASREAMDIYGLGSSLIARLIETGQIKWIPDIYHL 477 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 ++ + K + L ++ + F R + A+GI A A ++ Sbjct: 478 DYNKIAEMERMGKKSADNLQKAIEASKTKNFDRVLFALGIRHIGSITARTLAQHFKNIDA 537 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 L+ + E+ +P GS AR +I + ++L L + Sbjct: 538 LIMAKEEELLSVPDIGSIIARSIIGFFSQKSNRELIDSLRKVGLQFT 584 >UniRef50_B7C8A9 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7C8A9_9FIRM Length = 667 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 104/581 (17%), Positives = 216/581 (37%), Gaps = 50/581 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S + I L+++++++ +Y+ + D YD+L L + + S Sbjct: 1 MSMMDEKARILELRKELEKYSIEYYVYDNPSITDQEYDRLMQELMALEEKYPEMYDATSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAV 130 + ++ L+G V H + + +K + +++ + V+ K DG+A+ Sbjct: 61 SQRIIGSVLDGFEKVTHDTQMLSLSNVFNKEEIEEFVQRISESVSNPEFVVECKYDGLAM 120 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ 190 L+Y DG +A++RG+G+ GED + V I ++P + + ++GE+++ + Q Sbjct: 121 ALLYDDGNFTRAVTRGDGIVGEDVSNNVKTILSIPMHIPEM-RHVEVRGEVYMPKASFEQ 179 Query: 191 QQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ----LMSDRLK 237 N R AG + + D S L + + + + + L+ Sbjct: 180 LNKRQEEKGLAPFANPRNAAAGSIRQLDSSICASRKLDAYWYYFQNASDFAVQTQEEALQ 239 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWL 293 ++ F + +++ + E + +LP+ DG+V++ + Sbjct: 240 AMSKMHFRTNP-LRKVCTTVEQIWQFIQEIQEKREDLPYEIDGMVIKLNNLADQRRLGST 298 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 + A+K+ + +K I VG++GKI+ A L PV + V + + Sbjct: 299 AKVPRYATAYKFPAQEVLTRLKDIVITVGRTGKITPNAVLEPVRVAGTTVSAAQLHNEDM 358 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT-----KPTPPENRFNSLTC------ 402 D+ GD ++V AG+ IP + V + T PT + L Sbjct: 359 IVNKDLRIGDIVVVRKAGEIIPEVVTSVPERRDGTQVPYKFPTTCPICGSHLVRLPDEAA 418 Query: 403 -YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQL 459 Y + C + + ++ ++ + +D +G+ LH+ I L ++L Sbjct: 419 HYCINQDCPARVVESMIHFASRDAMNIDTLGDKKIEQLHEWGYLNSIEDIYFLDRYYDEL 478 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFST 516 PG K +L ++KQP + +GI A L+ + Sbjct: 479 IEKPGYQKKSVDKLLESIEKSKKQPLGVILYGLGIRQVGKKAAMILAEQFGDIDTLMHAC 538 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + G A V+ + + + L L Sbjct: 539 VDELVLIHDIGLITASSVVAFFKEEKNLHLIDVLKQAGCNF 579 >UniRef50_Q1IHJ4 DNA ligase n=4 Tax=Bacteria RepID=DNLJ_ACIBL Length = 673 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 112/587 (19%), Positives = 225/587 (38%), Gaps = 57/587 (9%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 ++ L+++++ + Y+ E+ D YD + L + S + Sbjct: 4 TKDPAKQAEDLREKLRYHEHRYYVLDDPEISDADYDVMMNELKALEAKHPELLTPDSPTQ 63 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGVAV 130 V P G V H + ++ L W + + + K+DG+++ Sbjct: 64 RVGGKPREGFVKVAHSAPMLSLDNAYNEEELRDWARRVEELSGKAEIEYECELKLDGLSM 123 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-------GPLANSTLQGEIFL 183 L Y+D + A++RG+G GED T + + +VP VS L + ++GE+ Sbjct: 124 ALRYQDARFVLAVTRGDGSIGEDVTLNLRTVKSVPLGVSSATLKKTHMLGDFEVRGEVIF 183 Query: 184 QREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAW-PDG---PQ 230 + + N R AG + + + T L + + DG Sbjct: 184 PTKSFEKMNEDREKQGLAKFANPRNAAAGAVRVLEPNITAQRRLDFYAYFLLVDGRVHID 243 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVR--NEWWKAELPFVTDGVVVRAAKEP- 287 S+ L L GF + K+ D+V + E + +LP+ DGVV++ Sbjct: 244 RQSEALDTLEKLGFKVNSN-RAVFKSIDDVLKFIHKKEEDREKLPYEIDGVVIKVNSTAL 302 Query: 288 -ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 + + W +A+KY A V +V+ I VG++GK++ VA+L PV + V R Sbjct: 303 WQRLGFTGKAPRWAIAYKYAARAAVTQVEDILVQVGRTGKLTPVAALKPVPIGGTTVSRA 362 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW-------RGAERTKPTPPENRFNS 399 + ++ + GD + V G IP++ V+ + + PE + Sbjct: 363 TLHNMDEIDRLGLLIGDWVQVERGGDVIPKVVKVIDDKDHPRGKKKFKMPERCPECGGHV 422 Query: 400 LT------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + + C + ++ ++ V+ ++G+G++ L +++ Sbjct: 423 VRTEGEADHRCVNANCPAKLRESILHFASRGVMNIEGMGDSLVNQLVDRGLVKNVADIYE 482 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWS 510 L E+L + + K + + + +K P R + +GI + A A S Sbjct: 483 LDEEKLLSLERMGKKSAQNILDEIKGTKKLPLERVIYGLGIRMVGERTAQFLAEHFGSLD 542 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 ++ +TE+ ++ G A+ + E+ ++L L A + Sbjct: 543 GVMKATEEELLEVEEVGPRIAQSIHEFFAEPSNRELVKRLEAAGLQF 589 >UniRef50_Q6MRL9 DNA ligase n=1 Tax=Bdellovibrio bacteriovorus RepID=DNLJ_BDEBA Length = 684 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 115/603 (19%), Positives = 217/603 (35%), Gaps = 62/603 (10%) Query: 20 AVCPAWSPAR------AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR 73 A C W+ +++ L++ I + D +Y K + D YDQL A L ++ Sbjct: 4 AFCRDWTSEMGANYSMSKKRHEELKKIISEHDHNYHVLDKPTITDYEYDQLFAELLDIEK 63 Query: 74 C------FGSEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER--------- 116 S + V L G H + + + + Sbjct: 64 NPKGLDLSDSPSQRVGGTVLEGFTKAQHRLPMLSLANSYSPEDIFEFDERVRKFLNTEDP 123 Query: 117 SDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLAN 174 + + K DG+++ L+Y +G+L +AI+RG+G GED T + I ++P + P Sbjct: 124 VEYLCELKFDGLSMELIYENGQLVRAITRGDGTVGEDVTHNIKTIKSIPLKLSHKNPPPL 183 Query: 175 STLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW 225 ++GE+ + +E + N R AG + + D L F +A Sbjct: 184 LEVRGEVLMFKEDFARLNETQQENGQQTFANPRNAAAGTVRQLDSRIAASRPLRFFGYAL 243 Query: 226 P----DGPQLMSDRLKELATAGFTLTQTYTR----AVKNADEVARVRNEWW--KAELPFV 275 + + + G Y K +EV + + + +LPF Sbjct: 244 GAVEGETFNTQKNIQEYFNDHGIPTVLPYKEDLLVVAKGPEEVVKYYHHIEKVRPKLPFD 303 Query: 276 TDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 DGVV++ + W A K++P V+ I VG++G ++ VA + Sbjct: 304 IDGVVIKVNSLRLQEDLGLVARSPRWATAAKFKPEQAQTTVEDIVVQVGRTGALTPVAIM 363 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV---WRGAERTKP 390 PV + V + + DI GD +++ AG IP + +VV R A+R Sbjct: 364 KPVKVGGVTVTNATLHNQDEITRKDIRIGDTVIIQRAGDVIPEVVEVVNPDKRPADRLPY 423 Query: 391 TPPENRFNS----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALH 440 + PE + + +C L A++ + +D +G+ L Sbjct: 424 SIPERCPACDSVAVKAEGEVVTRCVNPLCIAVVKESLKHFVARRAMNIDKVGDRLIETLV 483 Query: 441 QTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA 500 + LT EQ+ + + + ++ R++ A+GI Sbjct: 484 DNKLLTRFSDFYRLTKEQILSLERQGDKSADNIIKSIENSKNPTLARFIFALGIRFVGEQ 543 Query: 501 L---NASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 A + + L ++E+ Q+P G+ A+ + +W N ++ + + Sbjct: 544 TGKHLADHFLTIDKFLEASEEELLQVPEIGAKVAKSIRDWTGNPKLVDEVKAMIELGVKI 603 Query: 558 FEP 560 P Sbjct: 604 AGP 606 >UniRef50_Q112N5 DNA ligase n=5 Tax=Bacteria RepID=DNLJ_TRIEI Length = 774 Score = 632 bits (1632), Expect = e-180, Method: Composition-based stats. Identities = 126/629 (20%), Positives = 219/629 (34%), Gaps = 100/629 (15%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 ++ L++++++ Y+ + +ED VYD L L + + + S + V Sbjct: 7 EVEQYTQNLREKLQEAGYSYYVLDQPIMEDAVYDHLLRELQELESQYPQLIVSDSPTQRV 66 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------------------------- 115 P +V H + + + L W Sbjct: 67 GEKPATKFVSVKHNIPLYSLENAFNIQELKSWQERWQRQTLLENQRLTLPLRGEVKIKNS 126 Query: 116 ----------------------------RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGN 147 D + K+DG A+ L Y +G L + +RG+ Sbjct: 127 IDESDNFSTVNSLAPVITGSNFDEIDLASVDYICELKIDGSALALTYENGLLVRGATRGD 186 Query: 148 GLKGEDWTQKVSLISAVPQTVS--GPLANSTLQGEIFLQREGHIQQQMG--------GIN 197 G+ GED TQ V I+++P + P ++GE FL N Sbjct: 187 GIMGEDITQNVKTINSIPLKLKVDNPPLLVEVRGEAFLSINVFENINAEREKIGEIIFAN 246 Query: 198 ARAKVAGLMMRQDDSDTL-NSLGVFVWA-WPDGPQ-------LMSDRLKELATAGFTLTQ 248 R AG + + D L F + + + + S L+ L GF + Sbjct: 247 PRNAAAGTLRQLDSKIVAKRRLDFFAYTLYLEENESNFLQFYTQSQCLELLKKLGFKVNP 306 Query: 249 TYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWK 304 + + +EV W + LP++TDGVVV+ + W +A K Sbjct: 307 N-GQVCSSLNEVEAYYQYWDKQRENLPYLTDGVVVKLNSLSLQEKLGFTQKYPRWAIALK 365 Query: 305 YQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQ 364 Y V+ + VG++G I+ VA L PV L VQR ++ + R E D+ GD Sbjct: 366 YPAEEIPTIVQGVTVQVGRTGAITPVAELKPVQLAGTTVQRASLHNSDRLAELDLHIGDT 425 Query: 365 ILVSLAGQGIPRIDDVVWRGAER-----TKPTPPENRF-------NSLTCYFASDVCQEQ 412 ++V AG+ IP + V+ + PT N + C Sbjct: 426 VIVRKAGEIIPEVVRVLPELRPKKAQRFQMPTHCPECSQPLIKPRNEAVTRCINTSCPAI 485 Query: 413 FISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQ 472 L ++ L ++G+GE + L + + + LT E L + + K + + Sbjct: 486 LRGSLAHWASRAALDINGLGEKLVQQLVNSGLVKSVADLYNLTMEDLTSLERMGKKSANK 545 Query: 473 LWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSG 529 L ++ QP+ R + +GI A L + +QL + + + G G Sbjct: 546 LIEAMGTSKAQPWRRVLYGLGIRHVGTVNAELLTQKFPTVAQLSQAKATDIETVHGIGPE 605 Query: 530 RARQVIEWKENAQIKKLGSWLAAQQITGF 558 A+ V +W + L L +T Sbjct: 606 IAQYVEQWFRVPANQNLVERLKIAGVTME 634 >UniRef50_C1F7S7 DNA ligase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=DNLJ_ACIC5 Length = 677 Score = 631 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 123/596 (20%), Positives = 233/596 (39%), Gaps = 67/596 (11%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S A A ++I L++ I+ + Y+ + + E++D +D+L +L + + S Sbjct: 1 MSHASAAQQIESLRESIRHHEYLYYVQDQPEIDDLAFDELMRKLQRLEAEHPELITPDSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE---------RSDLWVQPKVDG 127 + V P G V H + + + L W R + + K+DG Sbjct: 61 TQRVGGKPKEGFAKVAHSRPMLSLDNVNSEEELRDWERRVREQAGQNAEIEYVCEYKLDG 120 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-------LANSTLQGE 180 +++ L YRDG+L + ++RG+G GED T V I +VP +++ AN ++GE Sbjct: 121 LSMALHYRDGQLARGLTRGDGEIGEDVTTNVRTIRSVPLSIADGKLQQAKMPANFEVRGE 180 Query: 181 IFLQREGHIQQQMGGINARAKVA------------GLMMRQDDSDTL-NSLGVFVWAWP- 226 + + + R G + + + L + + Sbjct: 181 VVMPFTAFEKLNEE----REAQGLAPAANPRNAAAGTIRTLEPNIVAQRRLDFYAYFALT 236 Query: 227 ----DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVV 280 D + L LAT GF + Q + A K+ + V N E ++ L + DGVV Sbjct: 237 EKGEDAFGEQEEALDALATLGFRVNQ-HRHAAKSIETVVEFVNRAEEHRSRLGYEIDGVV 295 Query: 281 VRAAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVML 338 V+ + W VA+K+ + V +V+ IQ VG++GK++ VA LAPV + Sbjct: 296 VKVNSAVLQRRLGYTGRAPRWAVAYKFAARSGVTQVEDIQVQVGRTGKLTPVAWLAPVQV 355 Query: 339 DDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT-------KPT 391 V R + + + + GD + + G IP++ +VV Sbjct: 356 GGTTVTRATLHNADEIERLGLRIGDFVRIERGGDVIPKVVEVVDDAEHPRGTKHFHFPHA 415 Query: 392 PPENRFNSLT------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRF 445 P + + C + L+ ++ V+ ++G+GEA L Sbjct: 416 CPACGSEVVRTPGEADYRCVNTDCPARLRESLLHFASRGVMNIEGMGEAIVMQLLGRGLV 475 Query: 446 EHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALN 502 + + LT EQL + + K + L + + +R+ P R + +GI A Sbjct: 476 KTVSDIYSLTEEQLVSLERMGKKSATALLGEIDKSRQAPLDRVLFGLGIRFVGERTAQAL 535 Query: 503 ASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 A + S L+ ++ + +++ G + + E+ + + + L L + Sbjct: 536 AEEYGSMDALMQASREELERVNDVGPRVSEAIREFFDEPRNRDLVERLREAGLRFT 591 >UniRef50_A8R902 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R902_9FIRM Length = 664 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 102/576 (17%), Positives = 216/576 (37%), Gaps = 50/576 (8%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 Q+ I L++ + + +Y+ K V D YD+ L + + F S + V Sbjct: 3 QQRILELRKILDRLAYEYYVLDKPSVSDQEYDRYYQELLKLEDEFPQYRDPNSITQRVGG 62 Query: 85 PPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVYRD 136 L+ V H + + L + + V+ K+DG+A++L Y + Sbjct: 63 VVLDAFEKVSHKRRMLSLDNAFNLEDLMAFDERVRQSVKNPEYVVELKMDGLAISLHYHN 122 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI------- 189 G+ +A++RG+GL GED T V I+++P + + ++GE+ + ++ Sbjct: 123 GRFVQAVTRGDGLVGEDVTNNVRTIASIPMHIDME-GDLEVRGEVIMPKKSFEALNEQRR 181 Query: 190 -QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ----LMSDRLKELATAG 243 Q + N R AG + + D L +++ + Q + L+ L Sbjct: 182 KQGEEEFANPRNAAAGSIRQLDSRIAASRKLDAYLYYFEGAQQHAMHTHEEALEALEAMR 241 Query: 244 FTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEW 299 + + KN EV + E + +LP+ DG+V++ + + Sbjct: 242 IKVNP-LRKVCKNMQEVWQFIQEMSERRNDLPYEIDGMVLKVNDLHAWDLLGTTAKAPRY 300 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +A+K+ V ++ I +VG++G+I+ A L PV + V + + +E D+ Sbjct: 301 AIAYKFPAEEVVTKLLDIVLSVGRTGRITPNAVLEPVRVAGTTVSAATLHNEDMIKEKDV 360 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERT-----KPTPPENRFNSLTC-------YFASD 407 D +++ AG IP + + T P + L Y + Sbjct: 361 RINDDVIIRKAGDIIPEVVRSLPERRNGTQGIYKFPQICPFCGSKLVRFADEAAHYCMNQ 420 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGI 465 C + + ++ ++ + +D +G+ H+ I L+ E++ G Sbjct: 421 DCPARIVRGMIHFASRDAMNIDTLGDKKIEFFHKQGFLNTIEDIYELSLHKEEILALEGF 480 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQFWQQ 522 + ++ ++++P + +GI A + L+ + E Sbjct: 481 QEKSFQKMILAIEASKERPLEDLLFGLGIREVGKKAARVLAKTYGNIDDLMAAEEAELTA 540 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 + G A+ + + + K+L + L + Sbjct: 541 IKDIGVVTAQSIRAYFAEPKNKELIAHLKGFGLRMD 576 >UniRef50_A8YTZ3 DNA ligase n=8 Tax=Lactobacillaceae RepID=DNLJ_LACH4 Length = 668 Score = 629 bits (1624), Expect = e-179, Method: Composition-based stats. Identities = 124/579 (21%), Positives = 230/579 (39%), Gaps = 48/579 (8%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 + A++E + L+ ++ +W D Y+ + EVED VYDQ RL + ++ F S Sbjct: 5 TLDEAKKEAASLRTKLDEWADAYYSKDAPEVEDNVYDQSYNRLLELEKAFPEIVTPDSIT 64 Query: 80 RDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMR-------ERSDLWVQPKVDGVAV 130 + V V HP+ + + K+ L + + + V+ K+DG+++ Sbjct: 65 QRVGGEIDSDFTKVNHPIPMLSMGDVFSKDELKEFDQRMQKLVGHPVEYNVELKIDGLSL 124 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ 190 +L Y+DGKL +A +RGNG GED T I+ +PQ + PL ++GE ++ +E + Sbjct: 125 SLEYQDGKLVRASTRGNGYIGEDVTANARYIADIPQVLPEPLT-IEVRGECYMGKEAFAK 183 Query: 191 QQMG--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGP---QLMSDRLKE 238 N R AG + + D T L F++ W + P ++ Sbjct: 184 LNQEREDEGLSVFANPRNAAAGSLRQLDPKVTKKRQLSTFIYTWVNPPREITSQHQAIER 243 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE--PESRHWLP 294 + GF +T R + N DEV +E+ + L + DG+V++ + Sbjct: 244 MHELGFHTNET-GRKLANLDEVFDFIDEYTAKRNSLTYGIDGIVLKVDDLSLEQQLGNTV 302 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 W +A+K+ P Q V+ I + VG++G ++ A + PV L V R ++ + Sbjct: 303 KVPRWEIAYKFPPEEQETIVRDIVWTVGRTGVVTPTAVMDPVQLAGTTVARASLHNPDYL 362 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----------LTC 402 E + GD + + AG IP I +VV R A+ P + + Sbjct: 363 NEKGVRIGDTVKLHKAGDIIPEISEVVLSKRPADSVPYEIPTTCPSCGQKLVHLEDEVAL 422 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNT 462 + C Q ++ ++ + + G+G + L ++ LT + L Sbjct: 423 RCINPSCPAQVEEGIIHFASRPAMNIAGLGPKIVKQLIAKDLVHNVADLYHLTEDDLAQL 482 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFSTEQF 519 + L + ++K + +GI A L A ++ +++ Q Sbjct: 483 DHFKEKSINNLLTAIDNSKKNSVELLITGLGIDHVGAKAARLIAQKFKNLEKIMSLGVQD 542 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 + G A + + + +KL L + Sbjct: 543 IASIDTIGMTTAESMTTYFAQPEAQKLIEELRESGLNMD 581 >UniRef50_C4FUF5 DNA ligase n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FUF5_9FIRM Length = 671 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 104/581 (17%), Positives = 215/581 (37%), Gaps = 49/581 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 Q + ++ + + Y+ +S V D YD L L + + S Sbjct: 3 MPSQNLQARLEEVKHLLNDYAYHYYVLDQSLVSDASYDALYRELEEIEAAHPEWITPDSP 62 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVA 129 + V L G V H + + ++ ++ + + K+DG+A Sbjct: 63 TQRVGDQLLEGFSKVAHAESMYSLGNAFSPEEVTQFIERVTQQVEGPVSFMCECKIDGLA 122 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 + L Y+DG + +RG+G GED TQ + I ++P + L+ ++GE ++ + + Sbjct: 123 IALTYQDGVFVRGATRGDGTIGEDITQNLRTIRSLPLRLRQNLS-VEVRGECYMPKAVFL 181 Query: 190 QQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG----PQLMSDRL 236 N R AG + + D L +F+++ P+ + Sbjct: 182 ALNEEREAQGQEIFKNPRNAAAGGLRQLDPRAVADRQLNIFLYSAVYTDEFHPESQAGLF 241 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHW 292 G R + A+EV + +LP+ DGVV++ + ++ + Sbjct: 242 AAFEQLGLRTNP-LRRECQTAEEVIDYIQMIGQQRHDLPYEIDGVVIKVNHIDQQQALGF 300 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W +A+K+ V ++ +++ VG++G ++ A + PV L VQR ++ +V Sbjct: 301 TVKAPRWAIAYKFPAEEAVTTLREVEWTVGRTGVVTPTAIMDPVPLAGTTVQRASLHNVD 360 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT-----KPTPPENR-------FNSL 400 + D+ GDQ+ + AG IP I V+ + PT + Sbjct: 361 LIESLDVRIGDQVTIHKAGDIIPEITSVLLAKRPQDSQPLAIPTHCPECQTALVRQGEEV 420 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 + VC Q ++ L ++ + + G+G L + + L+ E L Sbjct: 421 ALRCPNLVCPAQRLALLSHFVSRGAMNIQGLGPRILNQLVASQAVTELDDLYRLSLEDLL 480 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNA---SDERSWSQLLFSTE 517 + I + + +L ++ R + +GI A ++L +T Sbjct: 481 SLDKIQEKSAQKLLAAIEASKSNSAERLLFGLGIRHVGAKAARLVLQVFGDLNRLSQATA 540 Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 + + G G ++ ++++ + + LA + Sbjct: 541 EEIGAIEGVGPIISQSLVQYLTLESSQAMLKRLAEAGVNLT 581 >UniRef50_Q4FUW9 DNA ligase n=25 Tax=Gammaproteobacteria RepID=DNLJ_PSYA2 Length = 691 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 115/592 (19%), Positives = 218/592 (36%), Gaps = 57/592 (9%) Query: 23 PAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------ 76 P + ++ +KQ + Y+ +ED YDQL L + + + Sbjct: 18 PITNDDAIVTQMRTFIDTLKQHNYAYYVLDNPILEDSEYDQLRRSLLELEEEYPDLVQPD 77 Query: 77 SEPRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRER----------SDLWVQPK 124 S V PL V H + + + + N L +MR + ++ K Sbjct: 78 SPINQVGDMPLPAFTQVTHDIPMLSLGNVFEYNDLRDFMRRVNDRLSVAQQSPEYEMELK 137 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQGEIF 182 +DG+AV+L Y GK +A++RG+G GED TQ I +P ++ + ++GE+ Sbjct: 138 LDGLAVSLKYVHGKFTQAVTRGDGQTGEDITQNAKTIRNMPLWLADAADIELLEVRGEVL 197 Query: 183 LQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVW----AWPDGP 229 + + G + N R AG + + D S L + + D Sbjct: 198 MPKAGFERLNRLAAEKEEKTFANPRNAAAGSLRQLDPSVAASRPLAFYAYSVNQGLLDTI 257 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKE- 286 S L + GF+++ V N E +A+LPF DG+V++ Sbjct: 258 DTQSAALAWIKDIGFSVSA--VEVVSNPREAQTYYESIIATRADLPFEIDGMVIKVNSLA 315 Query: 287 -PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + +L + W A+K+ + + AI + VG++G+I+ V L PV + V Sbjct: 316 LQQQLGFLSREPRWATAYKFPAETVMTRLHAIDWQVGRTGQITPVGKLEPVKVGGVTVSN 375 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT------KPTPPEN---- 395 V + + Q D+ GD + V AG IP++ V T P Sbjct: 376 VTLHNFGEIQRLDVRAGDMVSVHRAGDVIPKVTRVWHEQRPENSEPVQLPSTCPVCDSPV 435 Query: 396 ---RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 + +L C Q L+ +++ + +DG+G + + + + + Sbjct: 436 VLPKDEALARCTGGLFCPAQQQEALIHFVSRRAMDIDGLGASWLISFFEHGLVKTVADIY 495 Query: 453 LL--TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDER 507 L E+L + + + ++ +R++ A+GI A A Sbjct: 496 QLHNHQEELVTLEKLGEKSVQNIISAIEASKHTTLSRFIYALGIRGVGETTAQNLAQQFG 555 Query: 508 SWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 L+ ++ + P G+ A ++ ++ + L + + Sbjct: 556 DLDALMSASIEKLLLTPDVGAITAELAYKFFRAPHNIEVITALREAGVHWDK 607 >UniRef50_C8R0P0 DNA ligase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0P0_9DELT Length = 680 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 128/586 (21%), Positives = 231/586 (39%), Gaps = 54/586 (9%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 A + +A++ ++ L++QI+ + Y+ E+ D YD L L + + + S Sbjct: 8 AAAKEQARQRVAELREQIRYHNHRYYVLDDPEIPDAEYDALFRELQELEERYPGLAGADS 67 Query: 78 EPRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWM---------RERSDLWVQPKVD 126 R V PL V H + + ++ +S ++ + L +PK+D Sbjct: 68 PSRQVGAEPLAQFAPVAHRLPMLSLENAFNEGEISDFLLRLGRFLHTDQVPALHAEPKLD 127 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS----GPLANSTLQGEIF 182 G+AV LVY DG +RG+G GE+ T ++ I+ +P+ + P A ++GE+ Sbjct: 128 GLAVELVYEDGLFTLGSTRGDGFTGENITANLATIATIPRRLKTGGNPPPARLEIRGEVC 187 Query: 183 LQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ--- 230 L G + N R AG + + D + T L F + D Sbjct: 188 LSITGFKELNRRRGEAGESLFANPRNAAAGSLRQLDPAITADRPLEFFAYGAADSAALAV 247 Query: 231 -LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEP 287 + L++L G L + R + + + + ++P+ DG+V++ Sbjct: 248 TTQAQLLEQLHAFGLQLIP-HGRVCPDLETALAHFRFLDEQRRQMPYEIDGMVLKVNDLA 306 Query: 288 ES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 W VA K+ V ++ ++F VG++G ++ VA L PV + V R Sbjct: 307 LQKRLGAKARSPRWAVAAKFAAVQAATKLIGVEFQVGRTGAVTPVAVLEPVKVGGVLVSR 366 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS---- 399 + + + D+ D +LV AG+ IP + V R + P N Sbjct: 367 ATLHNEDEIKRKDLRLHDTVLVQRAGEVIPEVVKPVADKRRGDEKPIQLPANCPECDHAL 426 Query: 400 ------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + C Q + L+ +K L +DG+G+ L QT I Sbjct: 427 IRKEGEAVRRCPNPQCPAQRLRSLIHFCSKAGLDIDGLGKKAVELLVQTGLVGDIPDIYR 486 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWS 510 L PEQL PG + +A++ A+ R + A+GI A + A S Sbjct: 487 LRPEQLAPLPGWGEKSAAKVCDAIAAAKSPKLARLLAALGIRHVGEVNAQVLARHFPSLE 546 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 L + E+ + ++ G GS A ++ + ++ + + L +T Sbjct: 547 ALQQAMEEDFLEVEGIGSQVAASLVTFFKDPTTTAMLAQLKELGLT 592 >UniRef50_A9NHW0 DNA ligase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=DNLJ_ACHLI Length = 659 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 134/578 (23%), Positives = 238/578 (41%), Gaps = 52/578 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 Q I L++QI + + Y + + + D VYD L L + + + S + + Sbjct: 2 DIQTRIKELRKQINEANYLYHTKDQPIISDFVYDGLMRELIELETKYPEYDDETSPTKKI 61 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR------ERSDLWVQPKVDGVAVTLVY 134 L+ H V + + +K L ++ + + K+DG+AVTL+Y Sbjct: 62 GGVVLDAFKKHTHTVPMMSLSNIFNKEELKVFYDRIQKVIPNTSFTTELKIDGLAVTLIY 121 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 G KA +RGNG+ GED T+ V I +P +S + ++GEI++ + + + Sbjct: 122 EKGIFKKAATRGNGVVGEDITENVKTIKTLPLQLS-KPLDIEVRGEIYMSHKTFKEVNLE 180 Query: 195 --------GINARAKVAGLMMRQDDSDTL-NSLGVFVW---AWPDGPQLMSDRLKELATA 242 +N R AG + + D L +F + + + L+ L+ Sbjct: 181 RANSNLDLFVNPRNAAAGTVRQLDSKVVAKRRLDLFTYTVVGASNFNSTQKETLEFLSEL 240 Query: 243 GFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHWLPGQAE 298 GF + Y + V N D ++ + + + LP+ TDGVV++ + E+ + + Sbjct: 241 GFPVNPHY-KLVDNLDALSDAIDNYDILRKTLPYDTDGVVIKVNQFEHYETIGYTAKYPK 299 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 + A+K++ Q+ +V+ I F VG++G I+ VA L PV + V R + + D Sbjct: 300 YAGAYKFEAEKQITKVEDIIFQVGRTGVITPVAVLTPVFISGSLVSRATLHNEDYILNKD 359 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-------------YFA 405 I DQ+LV AG+ IP + +VV RT P E + C Y A Sbjct: 360 IRIDDQVLVHKAGEIIPEVIEVVL--GSRTNQAPFEMVKHCPACESNLVRKQGEADYYCA 417 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTP 463 +D C + + L+ ++ + +D +GE LH + I L +QL+ P Sbjct: 418 NDNCPGKNVFGLIHFASRAAMDIDTLGEKVVELLHDQTYLQTIPDIYKLHTFKDQLEELP 477 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFW 520 G K K +L + ++ Q R + +GI A + S + L + + Sbjct: 478 GFGKKKVEKLLNAIEASKMQTLDRLIFGLGIKNVGAKVAKTLLNHYPSITLLADAKYEDL 537 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 Q+P G A V + N + + L + Sbjct: 538 IQIPDIGPEIADSVTTYFSNESNQHMLEELKNLGLQMT 575 >UniRef50_Q72BM7 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVH Length = 799 Score = 626 bits (1615), Expect = e-178, Method: Composition-based stats. Identities = 116/599 (19%), Positives = 207/599 (34%), Gaps = 59/599 (9%) Query: 17 SVWAVCP---AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQR 73 + A P P A++ ++L+ +++ + Y++ E+ D YD L L + Sbjct: 23 AAEATSPARHDAIPEEARQRAAQLRADLERHNRLYYELDTPEISDAEYDALYRELVGLET 82 Query: 74 CFG------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD------- 118 + S + V L G H + + ++ +++ + Sbjct: 83 RWPALRDEASPTQRVGGEVLEGLEKQAHTLRMYSLDNAFSRDEWGAFIQRMYNALPDAPS 142 Query: 119 -LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANS 175 W PK+DG+A+ ++Y +G A++RGNG GE T + + +P + G Sbjct: 143 AFWCDPKMDGLALEVIYENGVFTSALTRGNGEVGEVVTAAMRTVRNLPLALRGDDVPRRI 202 Query: 176 TLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP 226 ++GE+ + + Q N R AG + + D + T L + Sbjct: 203 EVRGEVVIAKADFEQLNARQSAAGGKLFANPRNAAAGSVRQLDTTVTAGRPLQFLAYGVG 262 Query: 227 D--------GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVT 276 S + L GF R + DEV + L Sbjct: 263 QVVLEGGTAPWTTHSGLMARLREWGFDTPPE-GRLCASPDEVWAYYEALGARRESLAIEI 321 Query: 277 DGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DGVV + + W +A K+ + + I+ VG++G ++ VA L Sbjct: 322 DGVVAKLDDTEAQEALGFTARAPRWALALKFPAMQARTRLDDIRVQVGRTGVLTPVAILE 381 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDD--VVWRGAERTKPTP 392 PV + +V R + + + + GD +LV AG IP + V R + Sbjct: 382 PVRVGGVEVSRATLHNEDEIRAKGLMLGDMVLVQRAGDVIPEVVRPLVEERTGDERPFVF 441 Query: 393 PENRFNS----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 PEN + + +C ++ +K L + G+GE + L Sbjct: 442 PENCPECDSPVVRPQGEVAHRCVNVMCPAVRRQSIIHFVSKAGLDVRGVGERWVQQLVDG 501 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARK-QPFTRWVMAMGIPLTR--- 498 LLT L + + +A + AR R + A+GI Sbjct: 502 GHVTSPVGLFLLTKLDLMRFERMGPTSAANFVTALDAARTGATLVRLICALGIRHVGEQT 561 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 A A++ L + + QQLP G A + + N +L L A + Sbjct: 562 ARTLAANFTDLDALREADAETLQQLPDIGPEVAGSIRSFFANEGNLELLERLRAIGLWP 620 >UniRef50_C0QJ86 DNA ligase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=DNLJ_DESAH Length = 685 Score = 626 bits (1614), Expect = e-178, Method: Composition-based stats. Identities = 118/596 (19%), Positives = 214/596 (35%), Gaps = 58/596 (9%) Query: 21 VCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG---- 76 + P+ S R ++E L++Q+ + +Y + + DG YD++ RL + F Sbjct: 2 IDPSSSFDRIKKEARLLREQLHVHNINYHVKDDPVISDGEYDRMMQRLIAIETQFPELST 61 Query: 77 --SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPK 124 S R + L H + + + + V+PK Sbjct: 62 PDSPTRRIGAKALTAFETAEHAIPMQSLDNAFSDQDVIDFHNRTAKILNTSDIRYTVEPK 121 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQG 179 +DGVAV L Y G L A++RG+G GE T I +VP ++ ++G Sbjct: 122 LDGVAVELRYEQGSLTLALTRGDGTMGEVITDNARTIPSVPLKLAPAGNGTIPDVLEVRG 181 Query: 180 EIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ 230 E+ + + N R AG + + D T L +FV+ + Sbjct: 182 EVIINSKDFEGLNKKRLATGEPLFANPRNAAAGSLRQLDSRVTAKRPLEIFVYGVGRAQE 241 Query: 231 --------LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVV 280 S L+ L GF + R+ + EV E + +L + DG+V Sbjct: 242 LMANFDIGSHSALLESLKRLGFRINP-LIRSGLSLTEVLDRFKAFETMRQDLDYEIDGMV 300 Query: 281 VRAAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVML 338 ++ E W +A+K+ + + + I VG++G ++ VA L PV + Sbjct: 301 IKVDDIVFQERLGTKARSPRWAIAYKFPAMEETTVINDIIVQVGRTGTLTPVAILEPVNI 360 Query: 339 DDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENR 396 V R ++ + Q DI D +LV AG IP++ V R P + Sbjct: 361 GGVMVARASLHNQDEIQNKDIRINDTVLVKRAGDVIPKVVKPVTALRTGSERVFVMPTHC 420 Query: 397 FNSLT----------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 + + C+ Q RL +K ++G+G L Sbjct: 421 PVCHSPVRRLDNEAAVKCINASCKAQLKQRLKHFVSKGGFDMEGLGTKLIDQLVDRTLVG 480 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNA 503 L E L + + + + +++ P R++ A+G+ T A L + Sbjct: 481 SFADLFTLDRETLAAMDRMGEKSATNIVQAIERSKRIPLKRFLFALGMAHTGESAAQLLS 540 Query: 504 SDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 S + LL ++ + + G G A V+ + N ++ + + + Sbjct: 541 STFFTLEALLKASAEALGAIEGVGPKTADSVVAFFANPDNQETIARMMENGVVIEN 596 >UniRef50_A9M2U7 DNA ligase n=39 Tax=Bacteria RepID=DNLJ_NEIM0 Length = 841 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 125/648 (19%), Positives = 217/648 (33%), Gaps = 120/648 (18%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVM 83 A + I RL + ++ +Y+ V D YD+L L + S + V Sbjct: 26 AAQHICRLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVG 85 Query: 84 MPPLNG--AVMHPVAHTGVRKMVDKN---------ALSLWMRE--------RSDLWVQPK 124 PL G V H V + + + + + ++PK Sbjct: 86 GEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVIEPK 145 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIF 182 DG+A++L+YRDG L +A +RG+G GED TQ + +S +P + G ++GE+ Sbjct: 146 FDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGEVL 205 Query: 183 LQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP---DGP- 229 + + + N R AG + + D T L F ++ DG Sbjct: 206 MLKADFVALNKRQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQDGFV 265 Query: 230 -QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKE 286 + L GF+L KN DEV + ELP+ DG+VV+ Sbjct: 266 AEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAFYEHMQQKRPELPYEIDGMVVKVNSL 325 Query: 287 PES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 + ++ W VA K+ + V+AI +G++G ++ VA L PV + V Sbjct: 326 AQQHELGFISRAPRWAVAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVT 385 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK--------------- 389 + + D+ GD ++V AG IP + V++ + Sbjct: 386 NATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMRETAVAVSDGIGHRQDD 445 Query: 390 ----------------------PTPPENR--------FNSLTCYFASDVCQEQFISRLVW 419 PT ++ +CQ Q L+ Sbjct: 446 LFAETPSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIH 505 Query: 420 LGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSK---------- 469 +++ + +DG+GE L H L LQ A Sbjct: 506 FASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKTVAESDQMPSE 565 Query: 470 -----------------SAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSW 509 + + ++ R++ A+GI A A + Sbjct: 566 GSSVGASGKHKKQPVKWAENILAGIEASKTPELARFLFALGIRHVGERTAKTLAQAFGTL 625 Query: 510 SQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 ++ + E LP G+ AR + + A+ + + L A + Sbjct: 626 ERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGVAP 673 >UniRef50_A5EVZ5 DNA ligase n=3 Tax=Gammaproteobacteria RepID=DNLJ_DICNV Length = 678 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 118/587 (20%), Positives = 230/587 (39%), Gaps = 52/587 (8%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 A + + E+ L+Q I+ + Y+ + D +D L +L + G S Sbjct: 2 AQNSSLIAAELEALRQTIRAHEYAYYVLEAPNIADSEFDALMQKLRALEAASGLPIPADS 61 Query: 78 EPRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVD 126 + V V H +A + + + + + + R + L +PK D Sbjct: 62 PTQRVGGKADNRFRNVAHHIAMLSLDNVFNADEFADFYRRLQEQLSPTTAISLIAEPKFD 121 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQGEIFLQ 184 G+A+ L Y +G L +A +RG+G+ GED TQ V IS +P ++ P ++GEI++ Sbjct: 122 GLAINLRYENGILQRASTRGDGITGEDVTQNVRTISTIPLRLNTHTPPDVIEIRGEIYMP 181 Query: 185 REGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG-----PQ 230 ++ N R +G + + D T L F + + + P+ Sbjct: 182 KKAFYALNEQAAANGEKIFANPRNAASGSLRQLDPRITARRQLAFFAYGYGEITNYQLPE 241 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW-WKAELPFVTDGVVVRAAKEPES 289 L++ + + +A + +A + + +LPF DGVV + + + Sbjct: 242 TYEALLEQYRAWHIPVCSLHQKAATLPEALAAYQQFAKQREQLPFDIDGVVFKVNRFADQ 301 Query: 290 --RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 +L W +AWK+ + + ++AI+ VG++G ++ VA L PV + V+ + Sbjct: 302 QRAGFLARAPRWAIAWKFPALEKTTRIEAIELQVGRTGAVTPVARLQPVTIAGVVVRSAS 361 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS------ 399 + + R DI GD I + AG IP + VV R + PE+ Sbjct: 362 LHNAREIARKDIRVGDTIFIRRAGDVIPEVVSVVLEKRLPDAPVFAMPEHCPVCAAAIVQ 421 Query: 400 -----LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 + C Q ++ L+ +++ L + G+GE + L L Sbjct: 422 NEDEAVARCSGGLHCPAQRVAALIHFASREALDIRGLGEKLIQQLVAQEFVRTPADLFCL 481 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 T + + P + K + + + A+K R++ A+GI A A+ + Sbjct: 482 TADDWASLPRMGKKSAHNVMTAIDAAKKTTLARFIYALGIRGVGSVNAQALAAHFGDLAA 541 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 + + Q++ G G A + + + + + + + A + Sbjct: 542 FMAADRAALQEIEGIGDVVAADIEHFFADEDNRAVIAAIVAAGVHWS 588 >UniRef50_B3EM49 DNA ligase n=13 Tax=Chlorobiaceae RepID=DNLJ_CHLPB Length = 684 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 116/596 (19%), Positives = 219/596 (36%), Gaps = 62/596 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 +A EI RL+++I + + Y+ + E+ D YD + +L + F S Sbjct: 1 MDKKQAVAEIIRLREEIDRHNYRYYVLARPEISDFQYDAMLEKLVALEGEFPELKTSDSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWM-----------RERSDLWVQPKV 125 + V V H + + + R+ + + K Sbjct: 61 SQRVGGGITKEFPTVEHREPMLSLSNTYSIEEVGEFYHRVVKLLPEEHRDSPEFVAELKF 120 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLA-----------N 174 DGVAV+L+YRDG L + +RG+G +G+D T + I +VP + P Sbjct: 121 DGVAVSLLYRDGLLVRGATRGDGSQGDDITGNIRTIRSVPLRLGNPSGSGEGVERYEGRE 180 Query: 175 STLQGEIFLQREGHIQQQMG------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD 227 ++GE+F+ + G N R AG + QD + + + + Sbjct: 181 IEVRGEVFMTKTDFAVLNEGRPEEERFANPRNATAGTLKLQDSGEVSRRKMVFVAYYLKE 240 Query: 228 GPQ---LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAEL---PFVTDGVVV 281 ++RL+ L GF + R + ++ + W K L P+ DG+V+ Sbjct: 241 SSAEIISHAERLELLERLGFYTGGEH-RVCRTLKDIREYIDGWQKKRLTGLPYEIDGIVL 299 Query: 282 RAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 + W +A+K+ +++I F VG+ G I+ VA L PV L Sbjct: 300 KLNNTALRDELGATSKSPRWAIAYKFPAERARTVIRSIVFQVGRLGTITPVAELEPVRLA 359 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA---------ERTKP 390 V R + ++ + D+ D +++ +G+ IP++ VV + P Sbjct: 360 GTTVSRSTLHNLEEVERLDVRLHDTVVIEKSGEIIPKVISVVEEKRRPGTLPVVVPESCP 419 Query: 391 ---TPPENRFNSLTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 TP N + Y + + C Q +R+ ++ + ++G+G+A L + Sbjct: 420 SCGTPLVKPPNEVHYYCPNSEGCPAQTKARIEHFASRNAMDINGLGKAIVEQLVSSGMVV 479 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNA 503 LTP+ + A+ + L + +R + + R + A+GI A A Sbjct: 480 DAGDLYRLTPDLIMRLDRQAEKSAGNLVNAIAKSRNREYFRVLFALGIRHVGIATARELA 539 Query: 504 SDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + L ++ + + G A V + + L + Sbjct: 540 GAYPTLDMLCKASVEALSDVTDVGPVIAESVHAFFRKPSATAMIEKLREAGVRLEA 595 >UniRef50_C7MMQ6 DNA ligase n=6 Tax=Coriobacteriaceae RepID=C7MMQ6_CRYCD Length = 725 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 124/605 (20%), Positives = 220/605 (36%), Gaps = 68/605 (11%) Query: 22 CPAW-SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG---- 76 P I L+++I+ Y+ + + D +D L L Q + Sbjct: 6 TPTLFDQDDVGARIEALRREIEHNSWLYYAQDAPAISDAAFDSLMRELRQLEAEHPEFYD 65 Query: 77 --SEPRDVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKV 125 S + V AV H + +D + L WM + L + K+ Sbjct: 66 PTSPTQRVGGYVGEQFAAVTHAERMYSLDNAMDLDELDAWMDRTFEALGTDVPLCCELKI 125 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL--------ANSTL 177 DG + + Y DG+L +A +RG+G+ GED T + + VP + L Sbjct: 126 DGSGIAVTYEDGRLMRAATRGDGVVGEDVTANIRTVRDVPLRLRAEALDALTDVEEALEL 185 Query: 178 QGEIFLQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG 228 +GE+++ ++ N R AG + ++D + T L F +A Sbjct: 186 RGEVYMPKKSFNALNAAADREGRQEFANPRNAAAGSLRQKDPTITAQRDLSTFTYATASN 245 Query: 229 PQL----MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVR 282 L + L+ + AGF + R + DEV E + LP+ DGVVV+ Sbjct: 246 AALTLPGQWELLEWMRNAGFHVNPD-VRLCHSRDEVRAFCKEALDKRQSLPYEIDGVVVK 304 Query: 283 AAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 + + W +A+K+ P + ++ I VG++G ++ VA L PV + Sbjct: 305 VNDFSLQDRLGFTARAPRWAIAFKFPPEEKTTLLRDITVQVGRTGALTPVAELEPVSVSG 364 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFN 398 V R + + + D+ GD ++V AG IP + V R A+ P + + Sbjct: 365 SVVSRATLHNEDEVRRKDVRVGDTVIVRKAGDVIPEVLGPVLSLRPADAQPWHAPTSCPS 424 Query: 399 S----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 S C Q RL+ ++ L ++G+GE L ++ R + Sbjct: 425 CGSPVVREEGGAILRCVSLDCPAQAHERLIHWASRGALDIEGMGEEVIGRLLESGRVVDV 484 Query: 449 FSWLLLTPEQLQNTPG-----------IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT 497 + LT L + + +A++ Q + ++ + F R + +GI Sbjct: 485 ADYYHLTEYDLATLDMGRVNKDGEAIHLGSTVAAKIVGQIDQSKHRGFARVLFGLGIRHV 544 Query: 498 R---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQ 554 A A S L + + G G A + + Q ++ L A Sbjct: 545 GKTTAEAIAQAYPSIEALREAKMDDLAAIEGIGPIIAESLFVFLRTPQNVQVIDRLLAAG 604 Query: 555 ITGFE 559 + E Sbjct: 605 VVMEE 609 >UniRef50_D1R586 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R586_9CHLA Length = 668 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 119/586 (20%), Positives = 220/586 (37%), Gaps = 52/586 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + + + L QI + Y+ + + + D +D L +L Q ++ S Sbjct: 1 MTKPSSHQSYQELCNQIWSHNKAYYVDHRPVISDEEFDHLMHQLEQMEKEHPEWISSASP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGV 128 + V G V H + K+ + ++ + K+DG+ Sbjct: 61 TQRVGEMLTEGFQTVAHRTPMLSLANSYSKDEVQDFIHRVKKLTRSQDVAFSCELKMDGI 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQRE 186 A++ + G + I+RG+G KG+D TQ + ++A P + GP ++GEIF+ ++ Sbjct: 121 AISAQFEKGIFVRGITRGDGKKGDDITQNLRTVAAFPLQLIGPSAPDFLEVRGEIFMPKQ 180 Query: 187 GHIQQQMGG--------INARAKVAGLMMRQDDSDTLNS-LGVFVWAWP----DGPQLMS 233 + N R AG + D ++T L V + D Sbjct: 181 VFQKLNAEKELEGEDLWANPRNAAAGSLKLLDPNETRRRKLDVVFYGIGQDSQDALTSQF 240 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES-- 289 L + G + + +E+ + +A LPF DGVVV+ E Sbjct: 241 ACHALLKSYGLPILHQVEK-CHTLEEIWEFVEKVRTLRASLPFEIDGVVVKLDSLAEQKR 299 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W VA+K+ ++ +I VG++G ++ VA L PV L + R + Sbjct: 300 LGSTGKNPRWAVAYKFAAEQAETDIYSITVQVGRTGVLTPVAELKPVFLAGSTIARATLH 359 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDV--VWRGAERTKPTPPENRFNS-------- 399 + DI GD +++ G IP++ V R ++ P + + Sbjct: 360 NEEEVLRKDIREGDSVIIEKGGDVIPKVVSVNFDKRKSDSHPWKMPTHCPSCGALVARSV 419 Query: 400 --LTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP 456 + + C EQ + RL++ K + ++ +GE L + + LT Sbjct: 420 DEVAVKCPNTLHCPEQQLRRLIYFAGKFAMDIEHMGEKVVEQLVRLGFVKRPSDIYALTS 479 Query: 457 EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLL 513 EQL G L ++ F+R++MA+GI A L A + L+ Sbjct: 480 EQLFQLEGFKTKSVENLITSIEKSKDVSFSRFIMALGIKHVGEGTAELLAKRAGNVHILM 539 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 T + Q+ G G A ++E+ +A+ ++ L + + E Sbjct: 540 QMTTEELLQIEGIGEKVATAIVEYFADARNQEEIQLLLQRGVLPQE 585 >UniRef50_Q26BQ5 DNA ligase n=2 Tax=Bacteroidetes RepID=Q26BQ5_9BACT Length = 684 Score = 622 bits (1605), Expect = e-177, Method: Composition-based stats. Identities = 120/603 (19%), Positives = 231/603 (38%), Gaps = 74/603 (12%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 SP +E+I L+ ++++ + +Y+ + D +D+ +L + S Sbjct: 1 MSP---KEQIQSLRDELREHNYNYYVNDNPTISDFEFDKKLEQLKTLEAAHPEFYDATSP 57 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVA 129 V + H + L W + + K DG + Sbjct: 58 SVRVGGEVTKNFNTIKHINRMYSLDNSYSIEDLRDWEKRIKKIVDGEIQYTCELKYDGAS 117 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREG 187 ++L Y +GK +A++RG+G +G++ T V I +VP + G A ++GEI L +G Sbjct: 118 ISLHYENGKFVQAVTRGDGNQGDEVTANVRTIKSVPLQLKGDDVPAKFEIRGEIVLPWDG 177 Query: 188 HIQQQMGGI--------NARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD---GPQLMSDR 235 + N R +G + QD ++ L ++ + D Sbjct: 178 FHKMNEERADQGLDLYRNPRNTASGSLKLQDSAEVAKRPLDCLLYQLAGENLPVKSQFDS 237 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RH 291 L GF ++ V + +EV N W + ELP+ TDGVV++ + Sbjct: 238 LTLARKWGFK-APQESKLVHSIEEVFEFINHWDVARKELPYETDGVVIKVNSLDQQDELG 296 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 + +W +A+K+ ++ I + VG++G I+ VA+L PV + V+R ++ + Sbjct: 297 FTAKAPKWAMAYKFAAEQVSTRLEEITYQVGRTGSITPVANLEPVEISGTTVRRASLHNA 356 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDV-VWRGAERTKPT-----PPENRFNSLT---- 401 + ++ DI GD++ V G+ IP+I V + + + + PT PE + Sbjct: 357 DQIEKLDIRVGDEVYVEKGGEIIPKIVAVELTKRPDNSTPTVYATHCPECHTELVRTEGD 416 Query: 402 --CYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 Y +D C Q R+ +++ + +DGIG L + LT EQ Sbjct: 417 AKHYCPNDMACPPQVKGRIEHFISRKAMDIDGIGAETVGQLVDAGFINNYADLYDLTVEQ 476 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 + +A+ + + + +++ PF R + +GI A A ++ LL Sbjct: 477 VLPLERMAQKSAENMINGIEASKQVPFERVLFGLGIRYVGETVAKKLAKHYKNVDALLNM 536 Query: 516 TE---------------------QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQ 554 + +P G A+ ++E+ +N + L Sbjct: 537 PAEPDKSSIDLFADVSSAADKKMEELTAVPEIGESIAQSLVEFIQNEDQMAIIERLKNTG 596 Query: 555 ITG 557 + Sbjct: 597 LQF 599 >UniRef50_C7NA81 DNA ligase, NAD-dependent n=12 Tax=Fusobacteriaceae RepID=C7NA81_LEPBD Length = 706 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 107/593 (18%), Positives = 243/593 (40%), Gaps = 63/593 (10%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG--------S 77 + ++ QE+ +L+ +I+ ++ Y+ E + D YD L L Q ++ + S Sbjct: 22 NFSKIQEKYKKLRNEIEYHNNLYYNEDNPIISDMEYDALMRELKQLEQEYPELLENSENS 81 Query: 78 EPRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRE-----------------RSD 118 + + V H + + + + + + + Sbjct: 82 PTKKIGGTASEKFSKVRHRTPMLSLSNTYNISEIEDFDKRVKKIILSQIDENKNNDENLE 141 Query: 119 LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ 178 ++ K+DG++++L+Y +G+L +A++RG+G GED T+ + IS++P+ + P++ ++ Sbjct: 142 YILELKLDGLSISLIYENGELVQAVTRGDGQIGEDVTENIREISSIPKKLKDPVS-LEVR 200 Query: 179 GEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD-- 227 GEI L + N R +G + + D + L +++ + Sbjct: 201 GEIILPISNFNRINQEREDDGEDVFANPRNAASGTIRQLDKTIVADRGLDCYLYYLVNAE 260 Query: 228 --GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRA 283 G + ++ + GF T + + + E+ + ++W + L + TDG+V++ Sbjct: 261 NYGINTHLESIEYIKNLGFQTTGVFEKY-TDFTELEKSIDKWHDKRKTLDYETDGLVIKV 319 Query: 284 AKEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 E+ + W +A+K+ ++ + F VG++G I+ VA L V L Sbjct: 320 NNFALYETLGYTTKSPRWAIAYKFPAEQVKTKLTDVTFQVGRTGVITPVAELEAVNLSGS 379 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS 399 V+R ++ + + DI GD ++V A + IP++ +VV+ R + + P N Sbjct: 380 VVKRASLHNFDEIRRKDIKIGDNVIVEKAAEIIPQVVNVVFDDRTGKEIEIQEPTNCPVC 439 Query: 400 ----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + + +C E+ ++ + ++ + + G+G+ + + + I Sbjct: 440 NSELSHEEGLVALKCHNPLCPEKVKRQIAYFVSRDAMNISGLGDKIVEKFIELGKIKTIV 499 Query: 450 SWLLLTP--EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNAS 504 L E+L+N + + L + ++ + F++ + A+GIP A L Sbjct: 500 DIYSLEKYREELENLEKMGQKSVDNLINSIESSKTRDFSKVLYALGIPFVGKFNANLLTK 559 Query: 505 DERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 ++ L + + + G G A V + + K+ + L + Sbjct: 560 TFKNIENLKNQSIENLLAVKGIGDKVAVAVNTFLNDENNWKIITDLQNIGLQF 612 >UniRef50_D2R1J9 DNA ligase, NAD-dependent n=3 Tax=Planctomycetaceae RepID=D2R1J9_9PLAN Length = 676 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 117/584 (20%), Positives = 218/584 (37%), Gaps = 51/584 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 E + L++ I++ D Y+ + E+ D YD+L LT + F S + Sbjct: 5 TPEILERLQALREAIRRHDYLYYVRAQPEISDLEYDRLMQDLTTIEASFPELVTPDSPTQ 64 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER--------SDLWVQPKVDGVAV 130 V P+ G V H + L + + V+ KVDGVA+ Sbjct: 65 RVGEEPMEGLVQVAHRAPMLSIENSYTVEDLQKFAERTSKSLDGEAVEWVVELKVDGVAI 124 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGH 188 ++ Y +G L +A++RGNG G+D T V I+ VP + G A ++GE+++ Sbjct: 125 SVRYENGLLVQALTRGNGEVGDDVTHNVRTIADVPLRLYGDKIPAVLEVRGEVYMTNSDL 184 Query: 189 IQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG----PQLMSDR 235 + N R +G + D L + V + Sbjct: 185 VLLNKRQQELGKELYANTRNVASGTIRLLDPKLCAERKLRMLVHGVGVCEGMTAENHMQF 244 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEPES--RH 291 L+++++ G T + + E + E EL F DG+V++ + + Sbjct: 245 LEQVSSLGLPPTP-HCKCFATFSEAVKYCEEIPERLHELDFEVDGLVLKVNRFDQRAKLG 303 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W++A+K++ ++ I VGK+G I+ VA L PV L V R ++ + Sbjct: 304 QRSKSPRWVIAYKFEKYEATTKLLGISVQVGKTGAITPVAELEPVQLAGTTVSRASLHNA 363 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDV--VWRGAERTKPTPPENRFNS---------- 399 DI GD ++V AG+ IP I V R + P + Sbjct: 364 DEIVRKDIRIGDIVVVEKAGKIIPHIVRVEAAERTTDLPVFQFPTHCPVCGSDVAKDEGG 423 Query: 400 LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + + C Q +L + + + ++G+G+ L + LT ++L Sbjct: 424 VYIRCTNPSCPAQLREKLRFFATRGAMDIEGLGDKLVDQLVASKLVTCYGDLYRLTLDKL 483 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQLLFST 516 + + + + +L ++ +P +R + + I + + A + + +T Sbjct: 484 TSLERMGEKSATKLLEGIVASKSRPLSRLLNGLSIRHIGSNGSQVLARHFGTLDAIRQAT 543 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + ++ G A V E+ + K L A + EP Sbjct: 544 LEDLSRVSEVGEITAASVYEFLHSDYGKTTIDDLVALGLNTQEP 587 >UniRef50_A4E8P5 DNA ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P5_9ACTN Length = 742 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 110/600 (18%), Positives = 217/600 (36%), Gaps = 78/600 (13%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLN- 88 L+ ++ Y+ E+ D +D++ L + + + S + V Sbjct: 39 ELRHELDYHAYRYYMLDAPEITDAAFDKMLVELQEIEAAYPDLVTPDSYTQRVGGYVSEQ 98 Query: 89 -GAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYRDGKL 139 V H + +D + L W++ D + K+DG+ V L Y++G Sbjct: 99 FTPVTHMARMYSMDDAMDLDELDAWLQRTEDALGAGNVTYTCELKIDGLGVALTYQNGTF 158 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL---------ANSTLQGEIFLQREGHIQ 190 +A +RG+G GED + V I VP +S P ++GE+++ + ++ Sbjct: 159 VRAATRGDGTTGEDVSLNVRTIKDVPMHLSEPALTHMGADRERTIEVRGEVYMPKGSFVR 218 Query: 191 QQMG--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG----PQLMSDRLK 237 N R AG + ++D T L F++A D + L Sbjct: 219 LNEEADAEGRDPFANPRNAAAGSLRQKDPKVTARRDLATFIYAIADTDPLHVHSQREFLD 278 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEPESR--HWL 293 L +AGF++ R EV + + +L + DGVVV+ + + Sbjct: 279 WLRSAGFSVNPNVAR-CATPAEVHEFCAQALEHRGDLDYDIDGVVVKVDSFQQQLDLGFT 337 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W +A+K+ P + ++ I+ VG++G ++ VA PV + + R + ++ Sbjct: 338 ARAPRWAIAFKFPPEEKQTVLREIRIQVGRTGVLTPVAEFDPVTVAGSTIARATLHNIDE 397 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPT--PPENRFNS----------LT 401 + ++ GD I+V AG IP + V PE + Sbjct: 398 IRRKNVREGDTIIVHKAGDVIPEVVGPVLDKRPADSVDWQMPEVCPVCGSPVVHEDGEVA 457 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 S C Q RL+ ++ + +DG+G+ + + + LT + + Sbjct: 458 YRCVSIDCPAQLKERLLHWVSRGCMDVDGLGDEIVDKMIAAGLIHDVADFYQLTVDDIAG 517 Query: 462 TPG--------------------IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRA-- 499 + + ++ + N ++ QP R + A+GI Sbjct: 518 LDTGRTYASSNSKKGVKKGDPIPVGLKTAEKIIVELNKSKSQPLGRVLFALGIRHVGKSV 577 Query: 500 -ALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 + A S +L+ ++E+ + G G A V ++ + + L ++ Sbjct: 578 GEVIAERFLSIDKLILASEEDIAECEGIGPKIAASVKQFLAVPENLAVLERLRQAGLSLE 637 >UniRef50_C5TMG5 DNA ligase n=8 Tax=Bacteria RepID=C5TMG5_NEIFL Length = 859 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 118/656 (17%), Positives = 211/656 (32%), Gaps = 125/656 (19%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 +P + I L + ++ +Y+ V D YD+L L + S Sbjct: 38 MNPT--AQRIKYLTDLLNRYAYEYYTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSP 95 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKN---------ALSLWMRE--------RSDL 119 + V PL G V H V + + + + + Sbjct: 96 TQRVGGEPLAGFDEVRHEVPMLSLTNAFSPQDENGVFDHAEMYAFDERVHGGLNGEKPEY 155 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTL 177 ++PK DG+A++L+YRDG L +A +RG+G GED TQ V +S +P + G + Sbjct: 156 VIEPKFDGLAISLLYRDGVLTQAATRGDGTTGEDVTQNVKTVSNIPLRLHGENIPELIEI 215 Query: 178 QGEIFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAW--- 225 +GE+ + + N R AG + + D T L F ++ Sbjct: 216 RGEVLMLKADFAALNARQAENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSIARQ 275 Query: 226 --PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVV 281 + L GF+L + N DEV + + LP+ DG+VV Sbjct: 276 QGGFIAEEHLQELSYCKELGFSLPDSNFGCFPNIDEVLAFYEQMQQKRPTLPYEIDGMVV 335 Query: 282 RAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLD 339 + + ++ W +A K+ + V+AI +G++G ++ VA L PV + Sbjct: 336 KVNSLAQQEKLGFISRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVG 395 Query: 340 DKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK---------- 389 V + + D+ GD ++V AG IP + V++ + Sbjct: 396 GVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETKISVSDGLQ 455 Query: 390 ----------------------PTPPENR--------FNSLTCYFASDVCQEQFISRLVW 419 PT ++ +CQ Q L+ Sbjct: 456 DDLFAETPSETRSEPIHKPYRLPTHCPICHSEIEREEGEAVARCSGGMLCQAQRAQGLIH 515 Query: 420 LGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK------------ 467 +++ + +DG+G+ L H L LQ A Sbjct: 516 FASRKAMDIDGLGQKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKASANEEEPSNS 575 Query: 468 -----------------------SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AAL 501 + + ++ R++ A+GI A Sbjct: 576 EIEDFEGETGNTLLAKNVKKQPTKWAENILAGIEASKTPELARFLFALGIRYVGERTAKT 635 Query: 502 NASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 A + + + E LP G+ AR + + + + L A + Sbjct: 636 LAQAFGTLENVRHAPEPILACLPDIGTVVARSIAHFFAQKAQQAMIDELLAVGVAP 691 >UniRef50_A5GPI9 DNA ligase n=47 Tax=Cyanobacteria RepID=DNLJ_SYNPW Length = 698 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 127/594 (21%), Positives = 211/594 (35%), Gaps = 65/594 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 P QE + L+Q + + Y+ ++ED VYD+L L + S + Sbjct: 4 PQGLQERAAELRQLLNRAAHAYYVLDAPDLEDSVYDRLYRELLDLEAAHPELVEADSPTQ 63 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD----------------LWVQ 122 V P G +V H + + L W + + Sbjct: 64 RVGGSPAEGFRSVTHRIPLFSLDNAFSAEELRGWYTRLLKVLDREPPSGSPLPALAMVGE 123 Query: 123 PKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGE 180 K+DG A+ L Y +G L +A +RG+G +GED T V I+++P + P A ++GE Sbjct: 124 LKIDGNALALSYDNGVLVRAATRGDGDQGEDITANVRTIASIPLRLHLDPPPAWVEVRGE 183 Query: 181 IFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW------ 225 + N R AG + + D L F + Sbjct: 184 ALIPDNTFAAINSERAARDEPLFANPRNACAGTLRQLDPKVVAARRLDFFAYTLHLPEDW 243 Query: 226 -PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVR 282 + P + L+ L AGF + + + D V + +W + +L + TDGVVV+ Sbjct: 244 SGERPTSQWESLRWLEDAGFRVNPNAA-LLPDVDSVEQFFGDWDSRRHDLNYATDGVVVK 302 Query: 283 AAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 + W +A KY + + + VG++G ++ VA PV L Sbjct: 303 LNDLRLQDAAGFTQKAPRWAIALKYPAEEAPSRLLKLTCQVGRTGVVTPVAEFEPVSLAG 362 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TKPTPPEN 395 V R + + R QE D+ GD I+V AG+ IP + V+ P + Sbjct: 363 TSVSRATLHNADRLQELDLHSGDTIIVRKAGEIIPEVLRVLPELRPEGALPLELPQQCPS 422 Query: 396 RFNSLTC-------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 + L + C L +K L +DG+G L + I Sbjct: 423 CGSDLVRESGEAATRCVNSSCPAILSGALRHWVSKGALDVDGLGSKLIEQLVERGLVRSI 482 Query: 449 FSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASD 505 L L + + + + L +R QP++R + +GI A AS Sbjct: 483 ADLYRLDTALLTSLERMGEKSAGNLVAALAQSRTQPWSRQLYGLGIHHVGEVNAKALASA 542 Query: 506 ERSWSQLLFST---EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 L + + L G G A+ + +W + + L L A +T Sbjct: 543 FADAHSLADAAVQRPEAITDLHGIGPEIAQSLQQWFNTSANQDLLQQLRAVGLT 596 >UniRef50_Q7NMN8 DNA ligase n=1 Tax=Gloeobacter violaceus RepID=DNLJ_GLOVI Length = 668 Score = 619 bits (1598), Expect = e-176, Method: Composition-based stats. Identities = 137/576 (23%), Positives = 226/576 (39%), Gaps = 49/576 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 P +E L+ + +W Y+ EV D +YDQ L + + S R Sbjct: 6 PPEIEEHTRTLRALLHRWGYAYYVLDAPEVSDAIYDQHYRELVDLESRYPELVSPDSPTR 65 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLW-------MRERSDLWVQPKVDGVAVT 131 V P + +V H V + + L W + + + K+DG A Sbjct: 66 RVGERPASAFVSVTHRVPMFSLENAFSQAELEKWGERLLRAIGPGLEFICELKIDGSATA 125 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHI 189 L Y DG L + +RG+G++GE+ TQ + I A+P + G A ++GE F+ R+ Sbjct: 126 LSYEDGVLVRGATRGDGVEGEEITQNLRTIRAIPLKLLGGEVPAVLEVRGEAFIPRDEFE 185 Query: 190 QQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG-PQLMSDRLKEL 239 + N R AG + + D LG F + G + + L EL Sbjct: 186 RINQERQAAGEKLFANPRNACAGTLRQLDSRVVASRRLGFFAYTAHYGRAESQWEALAEL 245 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESR--HWLPG 295 + GF + + ++ EV W + ELP+ TDGVVV+ R + Sbjct: 246 ESHGFRVNP-HRSLCRDLAEVRTFCEHWENHRHELPYDTDGVVVKVNAFDHQREVGFTSK 304 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A+KY + V+AI VG++G ++ VA L PV + V R + + R + Sbjct: 305 FPRWAIAFKYPAEEKSTVVEAIAVQVGRTGALTPVAELQPVAVAGTTVSRATLHNQDRIE 364 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----------LTCY 403 D+ GD +++ AG+ IP + V+ R E P+ Sbjct: 365 SLDVRVGDTVIIRKAGEIIPEVVRVIGELRPPEAVPYVFPQTCPECGTAVVRAPGEAAVR 424 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 + C +L A L +DGIG+ L + L+ EQL Sbjct: 425 CPNPRCPALIRGKLGHWCA--ALEIDGIGDKLIARLVSLGLVHTVADLYELSAEQLAGLE 482 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQFW 520 + +A++ Q + + +QP++R + +G+ A++ A S L + Sbjct: 483 RLGARSAAKIVEQLDRSHRQPWSRVLYGLGLRHIGASVSVELARAFASADALARADLAAI 542 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 L G G AR V+EW A+ + L L A + Sbjct: 543 ASLYGFGEELARSVVEWFAQAENRALLERLKAHGLQ 578 >UniRef50_C0QSF6 DNA ligase n=21 Tax=Bacteria RepID=DNLJ_PERMH Length = 714 Score = 617 bits (1591), Expect = e-175, Method: Composition-based stats. Identities = 119/590 (20%), Positives = 215/590 (36%), Gaps = 59/590 (10%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 + A+ I L+ I+ D Y+ + D YDQL L + F S Sbjct: 27 TKEDAEAIIEDLRDVIRYHDWRYYVLANPVISDYEYDQLFHLLKDIESRFPELITPDSPT 86 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER--------SDLWVQPKVDGVA 129 + V V H + ++ L + R + V+PK DG Sbjct: 87 QRVPSELTKEFPQVKHLAPMLSLDNSYNEEDLREFDRRVREAVGIDIIEYAVEPKFDGAG 146 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS---GPLANSTLQGEIFLQRE 186 ++LVY + +RG+G+ GED T + +I VP + + ++GE+ + +E Sbjct: 147 ISLVYEKDMFVRGATRGDGVVGEDITPNIRVIKTVPLSAEFSVYGIDRIEIRGEVLINKE 206 Query: 187 GHIQQQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAW------------ 225 + N R AG + QD + L FV+ Sbjct: 207 KFKEINHQRLEEGLPPLANPRNAAAGSLRLQDPKEVAKRGLEAFVYQITYAVDKDGNNLL 266 Query: 226 PDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWK--AELPFVTDGVVVRA 283 + + D +K L GF + + DEV EW + + P+ DG+V++ Sbjct: 267 GNKLRYHYDSIKILYELGFKSPYKEIKVCRGIDEVIDYCREWERKRDDYPYEIDGMVIKV 326 Query: 284 AK--EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + W +A+K++ ++ + F VG++G ++ VA L PV + Sbjct: 327 NDISLYDRLGVTSHHPRWAIAFKFRARQATTKIIKVVFQVGRTGAVTPVAKLEPVEIGGV 386 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS 399 V V++ + +E DI GD +L+ AG IP + VV R + P+ + Sbjct: 387 TVSSVSLINEDFIKEKDIRVGDLVLIERAGDVIPYVVKVVTEARTGKEKPIQFPKECPSC 446 Query: 400 ----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + C Q + R+++ +K + + G+GEA R +Q I Sbjct: 447 GSPLVKPAGEAVWRCININCPAQVVERIIYFASKDAMDIRGLGEANIRKFYQLGFLRSIP 506 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDE 506 L +++ G + L ++ +P R + +GI A A + Sbjct: 507 DIYRLPYDKIIQLEGFGQKSVENLKKAIEESKNRPINRLITGLGIRFVGKVTARTLAENI 566 Query: 507 RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 L + + ++LP G A + ++ N K+ L + Sbjct: 567 NCVEDLKDWSVEDLERLPDVGYVVAHSIYDFFHNPDNIKMIQELKRLGVQ 616 >UniRef50_D2LDU0 DNA ligase, NAD-dependent n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDU0_RHOVA Length = 777 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 122/633 (19%), Positives = 215/633 (33%), Gaps = 107/633 (16%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------E 78 S A++E L +I + D Y ++ E+ D YD+L RL + F S Sbjct: 59 LSAEDAKDEHDALAAEIARHDLLY-QDAAPEISDAEYDRLRLRLNALEAAFPSLITPESP 117 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPKV 125 + V P V H V + + ++ + + K+ Sbjct: 118 SQTVGATPSEKFAKVRHTVRMLSLGNVFSDEDVADFAGRVRRFLKFAPDEALDVTAEMKI 177 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFL 183 DG++V+L Y +G+L A +RG+G +GED T V I+ +PQ + A ++GE+++ Sbjct: 178 DGLSVSLRYENGRLAVAATRGDGSEGEDVTANVRTIADIPQVIRANDVPAVFEVRGEVYM 237 Query: 184 QREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD------- 227 N R AG + + D + T L F W W + Sbjct: 238 SHADFQALNERQVGKGGRMFANPRNAAAGSLRQLDPAITAARPLRFFAWGWGEVRGWGEA 297 Query: 228 ---GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVR 282 L+ + GF L ++ +E+ V E +A L + DGVV + Sbjct: 298 SALPADTNFGVLQAIHGWGFPLPP--VEICRSVEEMLAVYRAIEMKRASLGYDIDGVVYK 355 Query: 283 AA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 E ++ W A K+ + I VG++G ++ VA LAPV + Sbjct: 356 VNRLDLQERLGFISRTPRWATAHKFSAEKATTVLNGIDIQVGRTGALTPVAKLAPVTVGG 415 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT-----KPTPPEN 395 VQ + + + D+ GD ++V AG IP+I V PT Sbjct: 416 VVVQNATLHNEDEIRRKDVRIGDTVIVQRAGDVIPQILGPVLEQRPADAVEFVFPTLCPV 475 Query: 396 RF--------------NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 +++ +C Q + RL ++ ++G+GE +A Sbjct: 476 CGSHAVRETHPKTGKVDAVRRCTGGLICAAQAVERLRHFVSRHAFDIEGLGEKNIQAFFD 535 Query: 442 THRFEHIFSWLLLTPEQ------LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 R + + L G +A L+ R R++ A+GI Sbjct: 536 EGRIKAPADIFTMAARDGVDLPKLSEKEGWGAQSAANLFAAIEARRTISLERFIFALGIR 595 Query: 496 LTR---AALNASDERSWSQLLFSTEQ--------------------------------FW 520 A L A S L + + Sbjct: 596 HVGETTAKLLAKTFGSLDALRAAMAEPDAAELRPGDELLLESASGEDKRSLHRAIILAKL 655 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 ++ G G A+ ++++ + ++ L + Sbjct: 656 NEIDGIGDVVAQSIVDFFDEPHNREAVDALRRE 688 >UniRef50_A5KRV4 DNA ligase, NAD-dependent n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRV4_9BACT Length = 675 Score = 616 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 110/592 (18%), Positives = 222/592 (37%), Gaps = 58/592 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + +E +L++ + Q+ +Y+ + V D +YD L L + + S Sbjct: 1 MTKPHLRERAIKLRELLSQYSYEYYVLDRPSVADAIYDSLFGELKKLEAEHPELITADSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWM----------RERSDLWVQPKVD 126 + V P+ V H + + + + W+ E+ + + + K+D Sbjct: 61 TQRVGGVPIAKFQKVEHRTRMLSLNDVFSREEVEAWLLRVRKLAPEMDEKVEFFAEVKMD 120 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN-------STLQG 179 G+A +L+Y +GKL +A++RG+GL GED T V I +VP + + + ++G Sbjct: 121 GLACSLIYENGKLVRAVTRGDGLVGEDVTSNVRTIPSVPLALRTNKEDWRFLKGITEVRG 180 Query: 180 EIFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAW----P 226 EI + ++ N R AG + + D L + P Sbjct: 181 EIVMFKKDFELLNAQLEQEGKKTYANPRNLAAGTIRQLDPRLVAQRKLYFLAYDLLRDDP 240 Query: 227 DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAA 284 + + GF + + +++ DE+ W + +LP+ TDG+V++ Sbjct: 241 AEVPTWEMAYRIVRELGFRSNRD-AKVIQSVDELVEFAESWEKKRFDLPYNTDGMVIKLN 299 Query: 285 KEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 + +A+KY +K I ++G++G + VA L PV++ Sbjct: 300 DRALYRALGVVGKNPRGAIAYKYPAEQATTRIKDIFVSIGRTGAATPVAMLEPVVIAGST 359 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK--PTPPENRFNS- 399 VQ + + + + GD ++V AG IP + + + ++ P+N Sbjct: 360 VQMATLHNEDEVKRKGVLIGDTVVVQKAGDIIPEVISPIEKLRNGSEKAFKMPKNCPECE 419 Query: 400 ---------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 + +C + + +K L +DG+GE AL + Sbjct: 420 TDLVRPEGEAVWRCPNPICPAKTWRSIQHFASKAALDIDGMGEKNVAALLDAGLIKDAAD 479 Query: 451 WLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALN---ASDER 507 +L EQ+ A + +L + P +++ A+GI A + Sbjct: 480 LYVLKKEQILELERFADISAGKLIDAIAAKKHPPLAKFLFALGIRHVGAQTAIDVTAHFG 539 Query: 508 SWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 S + + +T ++ G G A ++ W E+ + + L + + Sbjct: 540 SLTAIRQATIDQLHEVEGVGEVVAESIVAWFEDPEHQALLDKFEKYGVQPQD 591 >UniRef50_A7HVV8 DNA ligase n=8 Tax=Alphaproteobacteria RepID=DNLJ_PARL1 Length = 710 Score = 616 bits (1589), Expect = e-175, Method: Composition-based stats. Identities = 114/609 (18%), Positives = 217/609 (35%), Gaps = 76/609 (12%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A EE+ RL +I++ D Y+++ + D YD L R + + S Sbjct: 20 LTLEEAPEELERLAAEIEKHDKLYYQKDAPRISDAEYDTLRRRNEAIEARYPELVREDSP 79 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPKV 125 V P +G V+H V + D + + +PK+ Sbjct: 80 SHRVGAQPADGFGKVVHKVPMLSLSNAFDDEDVRDFALRIRRFLNLKEEDILPITAEPKI 139 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFL 183 DG++ L Y GK +RG+G +GE+ T+ + I +P + G ++GE+++ Sbjct: 140 DGLSAALRYEKGKFVMGATRGDGREGENVTENLKTIGDIPAELKGKNIPDVVEVRGEVYM 199 Query: 184 QREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQ 230 E N R AG + + D T L F + W + Sbjct: 200 SHEDFAALNERQREAGKPVFANPRNAAAGSLRQLDAKITASRPLRFFAYTWGEMSDLPAD 259 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAA--KE 286 S + GFT+ + R + + + E +A L + DGVV + Sbjct: 260 TQSGVMDAFRKWGFTVNPLFGR-CDTVEALIDFYHDIEERRATLGYDIDGVVYKVDRLDW 318 Query: 287 PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 ++ W +A K+ + ++ I+ VG++G ++ VA L PV + V Sbjct: 319 QNRLGFVSRSPRWALAHKFPAEQAMTVLEKIEIQVGRTGALTPVARLTPVTVGGVVVSNA 378 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT-----KPTPPENRFNSLT 401 + + + + PGD ++V AG IP+I VV T PE +++ Sbjct: 379 TLHNADEIERLGVRPGDTVVVQRAGDVIPQIVRVVEDRPRGKKKFVFPDTCPECGSHAVR 438 Query: 402 -------------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI 448 VC Q + RL ++ ++G+GE A + + Sbjct: 439 EVNPKTGKLDAVARCTGGLVCPAQAVERLRHFVSRNAFDIEGLGEKQIAAFFEDGLIKKP 498 Query: 449 FSWLLL------TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---A 499 L + ++L++ G + + +L+ + R+ R++ +GI A Sbjct: 499 DDIFTLAARDAKSLKKLKDREGWGATSARKLFDAIDARREVELDRFIFGLGIRHVGETNA 558 Query: 500 ALNASDERSWSQL---LFSTEQ-------FWQQLPGTGSGRARQVIEWKENAQIKKLGSW 549 L A + + + + G G A ++++ +++ Sbjct: 559 RLLARSYGTLDHFEEQMRAAADREDEAYAELLSIDGVGEVLAESIVDFFAEKHNREVLDG 618 Query: 550 LAAQQITGF 558 L + G Sbjct: 619 LREAGVKGV 627 >UniRef50_C1CVC7 DNA ligase 2 n=5 Tax=Deinococci RepID=DNLJ2_DEIDV Length = 686 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 128/588 (21%), Positives = 228/588 (38%), Gaps = 54/588 (9%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 A SP L+ ++ + + Y+++ E+ D YD L+ L + S Sbjct: 4 AASPDD-HARYLALRAEVARHNRAYYEQDAPEISDDEYDALARALRDMEARHPEWVEDDS 62 Query: 78 EPRDVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMR------------ERSDLWVQP 123 + + P V H T + + D + L W + + Sbjct: 63 PVQTIGGAPSAAFEPVAHLTPMTSLDNVFDADELREWQEKLARSLNLPPESDDFTFTGEI 122 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DG++V L Y DG L A +RGNG GE T +V I +PQ + G ++GE++L Sbjct: 123 KIDGLSVNLYYLDGTLQWAATRGNGRVGEMVTAQVLTIPGIPQHLDGLKGQLEVRGEVYL 182 Query: 184 QREGHIQQQMG--------GINARAKVAGLMMRQDDSDT-LNSLGVFVWAWP--DGPQ-- 230 R N R AG + ++D T +L ++ DG + Sbjct: 183 SRADFAAFNAQAEELGTPLLKNPRNGAAGALRQKDPEVTRTRNLKAIFYSLGRRDGVEAR 242 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPE 288 S+ L+ LA GF ++ Y+ + A ++ F DG V++ Sbjct: 243 TQSEVLQWLAGRGFPVSH-YSETFRGYVAAADYHRRMTEARSNFEFDADGTVIKLDPLAL 301 Query: 289 S--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 + W +A+K+ +++I VG++GK++ +A LAP +++ V + Sbjct: 302 QEEAGFTSRAPRWAIAFKFPVEQVETVLESITVNVGRTGKLAPLAHLAPRLIEGSTVSKA 361 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TKPTPPENRFNSLT 401 + + ++ D+ GD ++V +G IP+I VV PT + +T Sbjct: 362 TLHNEDYIRQMDLRVGDTVVVRKSGGVIPQIMRVVTEKRPEKTTPFVFPTYCPECGHEVT 421 Query: 402 C-------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 Y + C Q R+ + ++ + + GIGE + +T LL Sbjct: 422 RAEGDANTYCPNPACPAQRFERIRYFVSRGAMDVRGIGEKLVIQVIETGLVRDAADLYLL 481 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 T EQL + K+ + Q ++ +P R + A+G+ A A S Sbjct: 482 TAEQLAGLERGGEKKAQNVLAQLEASKTRPLWRLINALGMTHVGERNAQALARAFGSLDA 541 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 LL +T + + +PG G A V + ++ L L A ++ E Sbjct: 542 LLRATPEQIEAVPGMGKVTAVSVSAALADPTMRNLIERLRAAGMSPEE 589 >UniRef50_C7M0G8 DNA ligase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0G8_ACIFD Length = 664 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 124/571 (21%), Positives = 221/571 (38%), Gaps = 43/571 (7%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 A ++ L+ I++ + Y+ + D +D L L + S Sbjct: 2 TESAAARVAALRSLIQRASEAYYVADDPIMSDDEFDGLVLELRALEAAHPELRSPDSPTE 61 Query: 81 DVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMR-------ERSDLWVQPKVDGVAVT 131 V PP V H + + D + L W+ L+ + K+DG+A++ Sbjct: 62 RVGAPPGSSFAPVRHRTPMLSLDNVFDADELDAWVERTRRGLGHDPALFFELKIDGLALS 121 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQGEIFLQREGHI 189 L Y DG+L +A +RG+G GED T ++ A+P+ + G ++GE+FL R Sbjct: 122 LTYVDGRLAQAATRGDGEVGEDVTANALVVDAIPRRLKGVTGPGLVEVRGELFLPRSAFR 181 Query: 190 QQQM----GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQL--MSDRLKELATA 242 N R AG + ++D + T L F + +GP + L+ L Sbjct: 182 ALNERVERPFANPRNAAAGSLRQKDPALTRDRGLSFFAYQLEEGPSFDYHHEALQWLGEV 241 Query: 243 GFTLTQTYTRA-VKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQAEW 299 GF + T + + E + L + DG V++ + + W Sbjct: 242 GFQVEAHATPVGLDELADKLAWLAEA-RDGLDYDIDGAVIKVDRLEDRVRLGTTTHAPRW 300 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 ++A+K+ + + I+ +VGKSGK++ A L PV + V R + + + D+ Sbjct: 301 MIAYKFPAEERPTRLVGIEVSVGKSGKVTPFAVLDPVRVGGSTVSRATLHNADQIARLDV 360 Query: 360 APGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----------LTCYFASD 407 GD ++V AG+ IP + V R + P + + Sbjct: 361 RVGDTVIVRRAGEVIPEVVRPVLELRPDDAVPWVFPTTCPVCHTPLVRDRGEVDWRCPNR 420 Query: 408 VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK 467 C EQ + RL+ ++ + +DG+GE R L + LT + L PG+ Sbjct: 421 RCPEQLVQRLIHFASRDAMDIDGLGEQRARQLVEAGLVVVPPDLYRLTDDDLARLPGVRH 480 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFSTEQFWQQLP 524 +L +R +P R + A+ I L A S S L TE ++ Sbjct: 481 RSIERLRAGIEASRSRPLGRVIFALAIDNVGQHVGMLVADVVGSLSGLRTVTEDELCRVE 540 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 G G A V+ ++++ +++ L + Sbjct: 541 GIGPVVAASVVAFRDSDLGREILDKLERAGV 571 >UniRef50_C3L496 DNA ligase n=3 Tax=Bacteroidetes RepID=DNLJ_AMOA5 Length = 671 Score = 614 bits (1584), Expect = e-174, Method: Composition-based stats. Identities = 116/585 (19%), Positives = 218/585 (37%), Gaps = 50/585 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 +A++EI RL + + Y++E + E+ D +DQL +L + F S Sbjct: 1 MDKEQARKEIKRLTALVAYHNKLYYEEAQPEISDYEFDQLLEKLIALENQFPDLRLPNSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGV 128 + V P V H + + +++ + + + K DGV Sbjct: 61 TQRVGGEPSKKFATVYHQYPMLSLSNTYSAEEVMQFVKRAHKQLPGATIEFFCELKFDGV 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQRE 186 A++L+Y++GKL+K ++RG+G KG+D T+ I +PQ + ++GE F+ Sbjct: 121 AISLLYKEGKLDKVVTRGDGFKGDDITENAKQIPNIPQIIEHKDLPPAFEVRGEAFMSLA 180 Query: 187 GHIQQQ--------MGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQ---LMSDR 235 + N R AG + + L ++++ Sbjct: 181 DFEKLNRDRLAHGLEPLANPRNATAGTLKTLKSTGPKRWLDCYMYSLLSTDMDLPTHEVC 240 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RH 291 ++ L F ++ TY + + +EV W K LP DGVV++ + Sbjct: 241 IQWLEKWCFHVSPTY-KKCRTLEEVMAYIEYWESAKNSLPVAIDGVVIKVNDTLQQNKLG 299 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W +A+KY+P ++++ + VG++G I+ VA L P++L V+R + + Sbjct: 300 LTAKSPRWAIAYKYKPENLATILESVDYQVGRTGVITPVAHLKPILLAGTIVKRATLHNA 359 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDD--VVWRGAERTKPTPPENRFNSLT-------- 401 Q D+ GD + + G+ IP+I V R + + T Sbjct: 360 GEIQRLDLHLGDTVFIEKGGEIIPKITGTDVSKRSLDSEPVKFVTHCPACGTELVKRYEK 419 Query: 402 --CYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 Y + C Q L ++ + + IG+ L L + Sbjct: 420 ALYYCPNTKGCPYQLQGLLKHFVHRKAMDIRSIGKQTIEMLINRGLVHTPADLYSLKYQD 479 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 +++ G + + ++++PF R + A+GI A L + Sbjct: 480 IRSLEGFKDLATRNVLSGIESSKQRPFERVLFALGIRHVGEVIADKITQYYTDIDTLSNA 539 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 T + +P G+ A V + EN + L L + P Sbjct: 540 TVEDLIAIPFIGTEIAHSVTNYFENPENLALIDVLKQAGLQLSRP 584 >UniRef50_C1SGA2 DNA ligase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGA2_9BACT Length = 652 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 107/569 (18%), Positives = 210/569 (36%), Gaps = 45/569 (7%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC------FGSEPRDVMMPPL 87 L ++ + Y+ E V D YD+L L + + S + V P+ Sbjct: 3 YRELVDKLNYYSKKYYVEDDPVVADAEYDKLYNELLRIEAEDPSIISHDSPSQRVGDKPV 62 Query: 88 NG--AVMHPVAHTGVRKMVDKNALSLWMRER------SDLWVQPKVDGVAVTLVYRDGKL 139 G V H + + + L ++ +++ V+PK+DG A+ L Y DGKL Sbjct: 63 TGLENVTHEIKLLSLSNAYSREELEKFVENIWDEYPGAEIVVEPKIDGAAMVLTYEDGKL 122 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ------- 192 + +RG+G GED T + I ++P + ++GE+F+ + Sbjct: 123 VRGATRGDGTTGEDVTHNIRTIRSLPLEI-EKSGRMIIRGEVFMPVASFERLNRLKGEKG 181 Query: 193 -MGGINARAKVAGLMMRQDDSDT-LNSLGVFVWAWP-DGPQLMSDRLKELATAGFTLTQT 249 N R AG + D L VF++ G + ++ + + GF + + Sbjct: 182 EKLFANPRNAAAGTLKLLDSKTAYERGLDVFLYGMDMGGTEHHLKDMELMKSLGFNINE- 240 Query: 250 YTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKY 305 TR N +++ + L + DG V++ + +W +A+KY Sbjct: 241 MTRKFNNFEDIWAHVEYIGSRRNSLEYDIDGAVIKVDSKAYQRSLGSTIKSPKWAIAYKY 300 Query: 306 QPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQI 365 V ++ + F VG++G I+ VA L PV L + + + I GD++ Sbjct: 301 PAQEAVTILRDVDFQVGRTGSITPVAKLEPVFLAGSTISNATLHNEDEIARLGIKIGDKV 360 Query: 366 LVSLAGQGIPRIDDVVWRGAERTK--PTPPENRFNS----------LTCYFASDVCQEQF 413 + G IP++ + + ++ N + + VC Q Sbjct: 361 TIRKGGDIIPKVVRPIIDERDGSERDIEFLSNCPVCQSKLQKEETDINRKCINPVCPAQR 420 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQL 473 +L+ +++ + + G GEA L + + L+ G + +L Sbjct: 421 KLKLLHFASRKAMDIQGFGEALVNKLVDDGELHDVADIYEKRFDYLKEEDGYGEKSVQKL 480 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGR 530 ++K+PF + + +GI A + A +L+ + E+ + GS Sbjct: 481 HEAIENSKKKPFDKVLYGLGIRHVGERTAQVLAEYFGDIDKLVSADEEALVNVRDIGSET 540 Query: 531 ARQVIEWKENAQIKKLGSWLAAQQITGFE 559 A ++ N + + + L + Sbjct: 541 AGAIVNSFANDDLSNIINRLKKSGLCFTA 569 >UniRef50_C0QVE5 DNA ligase n=2 Tax=Brachyspira RepID=DNLJ_BRAHW Length = 663 Score = 613 bits (1581), Expect = e-174, Method: Composition-based stats. Identities = 113/580 (19%), Positives = 227/580 (39%), Gaps = 47/580 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A++ I +L + I + Y+ + E+ED YD+L L +R F S Sbjct: 1 MNIEEAKQRIEQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWM--------RERSDLWVQPKVDGV 128 V L HP+A + ++++ + + + V+ K DG+ Sbjct: 61 TNKVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLEFDNRMQKELNQSKIKYTVENKFDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 A+ L+Y GKL A +RG+G GE+ T V ++S VP+++ ++GE + ++ Sbjct: 121 ALELIYEKGKLTVASTRGDGQVGENVTNNVKMMSNVPKSIKEK-KKLIVRGEALITKKDF 179 Query: 189 IQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDR 235 NAR +G + + D +++ L F + + Sbjct: 180 EALNKEREELEEIPFANARNAASGGLRQLDSAESKKRRLKFFAYQIANYKDFDLTNEYKS 239 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAK--EPESRHWL 293 ++ L+ GFT+ + + ++++ + DG+V++ E +L Sbjct: 240 MEFLSELGFTVEGVHPNIDAKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKHQEKLGFL 299 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 + VA+K++P + +K I+ VG++G ++ VA L PV + V V + + Sbjct: 300 SRAPRFAVAFKFKPEEKETVLKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHNPNE 359 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----------LT 401 + DI GD ++V +G IP+I VV R A+ P+ + Sbjct: 360 IKSKDIRIGDTVVVIRSGDVIPKITRVVLEKRTADSKPFEFPKKCPVCGGDTAVTDGDVI 419 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 ++ C + + + +K + ++ IG+ ++ + +T + L Sbjct: 420 VRCINEECPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRDDLFK 479 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ 518 + + + + ++ R++ A+GI A L A S +T Sbjct: 480 FERMGEKLAGYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIENFKKATID 539 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 Q + G G A+ + ++ N + KL L A + Sbjct: 540 DLQNIEGIGEISAKSIYDFLHNEKTLKLIDDLLASGVNPV 579 >UniRef50_Q0BMQ3 DNA ligase n=19 Tax=Francisella RepID=DNLJ_FRATO Length = 678 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 117/584 (20%), Positives = 221/584 (37%), Gaps = 49/584 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A + I +L + Q Y K + D YD+L L S Sbjct: 14 LAKAELKAYIDKLADYLSQQSYLYHTLDKPIISDSDYDKLFRLLQDLVNDNPQFKPINSV 73 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE---RSDLWVQPKVDGVAVTLV 133 V L G + H T + + L + + +L +PK+DG+A+++ Sbjct: 74 LDRVGGEVLAGFETIKHKKKMTSLANVFSLEELRDFYDKIEYDIELECEPKMDGLAISIF 133 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFLQREGHIQQ 191 Y++GK + A++RG+G++GE ++ V I VP + S P ++GEI L ++ + Sbjct: 134 YKNGKFDYAVTRGDGIQGEKVSENVKTIRNVPLKLNTSNPPEELEVRGEIILDKQSFLSL 193 Query: 192 QM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG------PQLMSDRL 236 N R AG + D L ++ + P+ + + Sbjct: 194 NEYMQTHENKTFANPRNAAAGSIRMLDSKVVAKRPLKLYSYGIGYFSKDFVYPETQFELM 253 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHW 292 + L + GFT++ KN EV ++ +A+L + DG+V + + Sbjct: 254 QLLQSFGFTISDNMF-LAKNFSEVEEYHHKMSHQRADLAYDIDGLVFKVNNIKLQDTIGY 312 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 +W +A+K+ +EV ++F VG++G I+ VA L PV + V + ++ Sbjct: 313 TARGPKWAIAYKFPAEEVESEVLNVEFQVGRTGAITPVARLKPVAVGGVIVSNATLHNIN 372 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS----------- 399 + DI GD+++V AG IP + + R ++ P N Sbjct: 373 EIKSKDIRVGDRVIVRRAGDVIPEVVKSLPQYRKSDAQIVEMPTNCPVCDSKIENVNDQA 432 Query: 400 LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + CQ Q RL +++ + +D +G L + ++ L EQL Sbjct: 433 IYRCTGGWHCQAQTTERLKHFVSRKAMDIDKLGAKLIEQLVAANLIKYPADIYKLNFEQL 492 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFST 516 +A S + +++ R++ A+GI A+ S + Sbjct: 493 TGLERMAAKSSQNVLDSITKSKEPSLARFIFAIGIKDIGEVSSDALANHFGSLESFRDAK 552 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + ++ G A ++ + ++ K+ A I P Sbjct: 553 FEELIEINYVGEIIANNIVSFWHDSLNIKIVEEFLAIGIKIQNP 596 >UniRef50_C6X5Z4 DNA ligase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5Z4_FLAB3 Length = 667 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 116/581 (19%), Positives = 230/581 (39%), Gaps = 49/581 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 P Q++I L+++I Q + Y+ + + D +D L + F S Sbjct: 2 PENIQQKIDALRKEIHQHNYSYYSLDEPTISDFEFDLKLKELQDLELQFPEFYDNNSPTL 61 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVAVT 131 V V H + D N L W + + + K DG +++ Sbjct: 62 RVGGQITKNFPTVQHQFRMFSLDNSYDFNDLEEWEKRIRKTLNEPVEFVAELKYDGASIS 121 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGHIQ 190 ++Y +GKLN+A++RG+G +G++ T V IS +P + G ++GEI+L + + Sbjct: 122 ILYENGKLNEAVTRGDGFQGDEITSNVKTISQIPMQLHGDFPERFFMRGEIYLTHQNFEK 181 Query: 191 QQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD---GPQLMSDRLKE 238 +N R +G + QD + L ++ + Q + L++ Sbjct: 182 INKRREEEGLDPFMNPRNTASGSLKMQDSGEVRKRGLSAVLYQFISENTAAQTHWELLQK 241 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWLP 294 + GF ++ + + DEV N W + L F DG+VV+ + + Sbjct: 242 AKSWGFRISDQ-AKLCADLDEVKAFINFWDENRHTLAFDIDGIVVKVNDLAQQRVLGYTA 300 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 W +A+KY+ E++ + + VG++G I+ VA+L PV+L V+R ++ + Sbjct: 301 KSPRWAMAYKYKAEKAETELQTVTYQVGRTGAITPVANLKPVLLAGTVVKRASLHNEDII 360 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDV--VWRGAERTKPTPPENRFNS----------LTC 402 ++ + D + V G+ IP+I V R + +N Sbjct: 361 RKLGLYEHDFVYVEKGGEIIPKIVGVNLAKRNPANAEIQYIKNCPECSTALIRVEDQAIH 420 Query: 403 YFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQN 461 + + C Q I R++ +++ L ++ +G L++ E+ + LT EQL Sbjct: 421 FCPNELHCPPQVIGRMIHYVSRKALNIENLGSETIEQLYREKLVENPADFYALTKEQLLP 480 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ 518 +A+ + + +++ F + + +GI A + S L +T Sbjct: 481 LERMAEKSAQNIITGIEKSKEIAFEKVLFGIGIKHVGETVAKKLVKNFNSIDDLKNATAA 540 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 Q+ G A + E+ +N + + L + + + Sbjct: 541 ELVQVEDIGLKIAESITEFFKNPENVLMIERLKSYGVKLEK 581 >UniRef50_B8DJT6 DNA ligase n=7 Tax=Desulfovibrionales RepID=DNLJ_DESVM Length = 808 Score = 611 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 110/595 (18%), Positives = 190/595 (31%), Gaps = 70/595 (11%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------EPRDVMMPPLN 88 L+ Q+ Y+ +E+ D YD L L + + S V + Sbjct: 38 EALRDQLNYHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVGDTVVA 97 Query: 89 G--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYRDGK 138 H + + +++ W PK+DG+A+ ++Y +G Sbjct: 98 ALETQAHTLRMYSLDNAFSAEEWDGFIQRMLRAEPDAPTAFWCDPKMDGLALEVIYENGV 157 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP---LANSTLQGEIFLQREGHIQQQMG- 194 A++RG+G KGE T + + +P + G A ++GE+ + R Sbjct: 158 FTTALTRGDGEKGEIVTTAMRTVRNLPLRLHGEGPHPARLEVRGEVVITRAEFDALNAAR 217 Query: 195 -------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----------------GPQ 230 N R AG + + D S T L + GP+ Sbjct: 218 RGAGEKLFANPRNAAAGSVRQLDASVTAGRPLRFLAYGVGQVVWPAETSDGAASAAQGPE 277 Query: 231 ----LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA 284 + LA GF R + +V + ++ELPF DGVV + Sbjct: 278 ARWATHGQVMAALADYGFGTPPDARR-CETPAQVMAYYEDLGRRRSELPFDIDGVVAKLD 336 Query: 285 KEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 + W +A K+ ++ I VG++G ++ VA LAPV + Sbjct: 337 DLSAQAALGYTARAPRWAIALKFPAHQATTRLEHIAIQVGRTGVLTPVAELAPVAVGGVT 396 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER---TKPTPPENRFNS 399 V R + + + D+ GD ++V AG IP + + + P Sbjct: 397 VSRATLHNEDEIRAKDLRVGDMVVVQRAGDVIPEVVRPLVDQRPASGLPEFEFPAECPVC 456 Query: 400 ----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + C ++ +K L + G+G L + Sbjct: 457 HTPVRREPGEAAWRCVNVGCPAVVRQSIIHFVSKAGLDIQGVGRRWVELLVDRGKVTSPA 516 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARK-QPFTRWVMAMGIPLTR---AALNASD 505 L + L + + F+ AR R + A+GI A A+ Sbjct: 517 DLFGLDKQTLLAFERMGPKLAENFIAAFDTARTGATLNRLICALGIRHVGEQTARTLAAH 576 Query: 506 ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 L + + QQLP G A + + N + L L + P Sbjct: 577 FADLDALGAAQAETLQQLPDIGPEVAASIRAFFANEGNRALLERLRGVGLWPVRP 631 >UniRef50_B1ZWH2 DNA ligase 1 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ1_OPITP Length = 675 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 121/596 (20%), Positives = 220/596 (36%), Gaps = 61/596 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 +P AQ I+ L+ Q+ + D+ Y + + ++ D YD L L + + + S Sbjct: 1 MTPVEAQSRIAELRAQVARHDELYHRRAQPQIGDFEYDALKRELAELEAAWPQFARGASP 60 Query: 79 PRDVMMPPLNGAV--MHPVAHTGVRKMVDKNALSLW--------MRERSDLWVQPKVDGV 128 V G H + + L + R+ ++PK+DG+ Sbjct: 61 TEQVGDDRTEGFQVYRHRERMMSLDNTYSETELREFHDRLVRELERDGLKFVIEPKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIFL 183 AV++ Y GKL +A++RGNG++G+D T I ++P+ + A ++GE+FL Sbjct: 121 AVSITYEKGKLVRAVTRGNGIEGDDITTNALTIKSLPRELKRADGVPLPAVIEIRGEVFL 180 Query: 184 QREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG------ 228 E ++ N R AG + + D + L V ++ Sbjct: 181 TTEEFLRINRQREEAGEPLYANPRNLAAGTIKQLDPREVAQRKLEVVLYGRGYVEPASAL 240 Query: 229 PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKE 286 P+ + + G + + ADE+ E + + TDG VV+ Sbjct: 241 PETQAQFHGWVKAWGLPTVERF-WTATGADEIWAAVQELDALRDTFAYATDGAVVKLDAV 299 Query: 287 PESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 P R W +A+K+ P +++AI VG++G ++ VA L PV L V Sbjct: 300 PLQRRAGSTSKSPRWAMAYKFAPDRAETQLRAITVQVGRTGVLTPVAELDPVQLAGTTVS 359 Query: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS--- 399 R + + DI GD + V AG+ IP + V R E PE Sbjct: 360 RATLHNRDEIARKDIRVGDFVYVEKAGEIIPAVIGVNPARRAPECVPYVFPEKCPECGTA 419 Query: 400 -------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 + + C Q R+ +K + ++G+GEA L + + Sbjct: 420 VVQLEGEVAVRCPNFSCPVQVRRRVQHFASKACVDIEGMGEAMVDVLVEKGWVHSVPDIY 479 Query: 453 LLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL---TRAALNASDERSW 509 L E L + + +L +++ R++ +GIP A A Sbjct: 480 QLKRENLLTLGKSVEKSTDKLLEAIEASKRAELWRFIHGLGIPHAGAAAAKDLARTFGGL 539 Query: 510 SQLLFSTEQFWQQ-----LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 +L + + + + + G G A ++ + + + + L + P Sbjct: 540 ERLASARYEDFIREKASVIGGIGETMALAILAYFAEPRNRAVVDELVRVGVQPVVP 595 >UniRef50_Q1NYF9 DNA ligase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NYF9_9DELT Length = 678 Score = 606 bits (1563), Expect = e-172, Method: Composition-based stats. Identities = 116/568 (20%), Positives = 206/568 (36%), Gaps = 54/568 (9%) Query: 39 QQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLN--GA 90 + I + Y+ E+ DG YD+L L + + + S R V Sbjct: 22 ELIAYHNHRYYVLDDPELSDGEYDRLFRELEELESRWPELVTADSPSRRVGGAAAEQFAP 81 Query: 91 VMHPVAHTGVRKMVDKNALSLW----------MRERSDLWVQPKVDGVAVTLVYRDGKLN 140 V H V + + L + + + +PK+DG+AV LVY G Sbjct: 82 VRHAVPMLSLENAFAEAELYDFENRLRRFLNLDDQPIAYYAEPKLDGLAVELVYEQGFFT 141 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQGEIFLQREGHIQQQMG---- 194 +RG+GL GE+ + + I +P + G A ++GE+ L G Sbjct: 142 LGSTRGDGLVGENISANLKTIDDIPIRLRGEQAPARLDIRGEVCLTVAGFTALNEQRAQN 201 Query: 195 ----GINARAKVAGLMMRQDDSD-TLNSLGVFVWAWPDG----PQLMSDRLKELATAGFT 245 N R AG + + D + L F + D ++ LA GF Sbjct: 202 GESLFANPRNAAAGSLRQLDPAISAARPLEFFAYGVADADPLAVGSQQQVIELLAALGFK 261 Query: 246 LTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLV 301 + + V + +++LP+ DG+V + + W + Sbjct: 262 TIP-HGHLCPDLAAVIAHFQQLAQRRSQLPYEIDGMVAKVNELALQKRLGSKTRTPRWAI 320 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 A K+ V + A+++ VG++G ++ VA L PV + V R + + + D+ Sbjct: 321 AAKFPAVQATTRLLAVEYQVGRTGAVTPVARLEPVTVGGVTVSRATLHNEAEIRRKDLRL 380 Query: 362 GDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS----------LTCYFASD-V 408 D +LV AG+ IP + + R + + T P + + + Sbjct: 381 EDTVLVQRAGEVIPEVVKPLAEKRNGRQREITLPTHCPECGSQLIRPAAEVVLRCPNHRH 440 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKS 468 C Q + L+ K L ++G+G+ L I L QL PG + Sbjct: 441 CPAQRLRALIHFCGKAGLDIEGLGQKVLEQLTAAGLVGDIPDIFRLRAAQLAPLPGWGEK 500 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPG 525 K+A + N R+ R + A+GI A L A + LL + E+ + + G Sbjct: 501 KAANVIAAVNRRRRVELGRLLAALGIRHIGEVTAQLLARRFGTLEGLLAAGEEDFLDIEG 560 Query: 526 TGSGRARQVIEWKENAQIKKLGSWLAAQ 553 G A ++ + +++ L + Sbjct: 561 IGPQAAAALVTYFAAPGNREILRQLQEE 588 >UniRef50_UPI0001C335E5 DNA ligase, NAD-dependent n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C335E5 Length = 682 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 125/587 (21%), Positives = 221/587 (37%), Gaps = 53/587 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + Q+ I +L++ ++Q + Y +S +ED VYDQL +L ++ S Sbjct: 1 MNNLNIQKTIIKLRKHLQQANYAYHVLNESIMEDSVYDQLYRQLYNLEQRNPNLISSDSV 60 Query: 79 PRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRER-----------SDLWVQPKV 125 + V P +V H + + + L W + K+ Sbjct: 61 TQRVGEKPALHFNSVKHDIPLYSLENAFNLQELEAWENRNQKYLKSQENQLIKYIAELKI 120 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGEIFL 183 DG A++L Y +G L + ++RG+G+ GED TQ + I ++P + P + + GE FL Sbjct: 121 DGSALSLTYENGLLTRGLTRGDGIVGEDITQNIRTIFSIPLHLNLDDPPSIMHVNGEAFL 180 Query: 184 QREGHIQQQMG--------GINARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDG---PQL 231 + + N R AG + + D L F ++ + Sbjct: 181 PLDEFKRINKQKQKEGKSLFANPRNAAAGTLRQLDSKIVSERKLQFFAYSLYADNLDIKS 240 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EP 287 D LK L GF + Y R K+ D V NEW K LP++TDGVV++ Sbjct: 241 QWDTLKFLQECGFLVNPYY-RLCKSLDTVTNYFNEWKSAKKHLPYMTDGVVIKINSHILQ 299 Query: 288 ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 + + W +A KY V+ I F G++G ++ +A + PV+L V++ Sbjct: 300 KELAYTQRFPRWAIALKYPAEEISTVVEDIIFNTGRTGAVTPMAVMNPVLLGGTIVRKAT 359 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS------ 399 + ++ R + I GD + + AG+ IP + V+ R + E Sbjct: 360 LHNIDRIAQLGICIGDTVTIRKAGEIIPEVIRVLKTLRHHKTKVFQISERCPKCNSMLVS 419 Query: 400 ----LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 ++ C L+ ++ + + G+GE L I L Sbjct: 420 FSNEAVVRCINNSCPAILKGNLIHWSSRDAVDISGLGEKIIDLLISNGLVNSISDLYHLN 479 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 +++ N + + L ++ + +T+ + +GI A L + S QL Sbjct: 480 FQEVSNLERMGIKSAENLIKSIESSKTKSWTKVLYGLGIHHVGYTTAILLTENFSSVQQL 539 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 L + + G G A + W + +KL S L Sbjct: 540 LQAPYDTLVTIKGIGKEVAYSIRSWFSLEENQKLISELDKNGFVLEN 586 >UniRef50_A4FMS5 DNA ligase n=71 Tax=Bacteria RepID=DNLJ_SACEN Length = 727 Score = 603 bits (1555), Expect = e-171, Method: Composition-based stats. Identities = 123/593 (20%), Positives = 219/593 (36%), Gaps = 61/593 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA +E + L +Q++ Y+ + DG +D+L L + S + Sbjct: 40 PAGVRERYADLVEQVRAHQFRYYVLDSPTISDGEFDELFTELQTLESDHPALRDPDSPTQ 99 Query: 81 DVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVAVT 131 V AV H + D + L W+ + K+DG+A+ Sbjct: 100 VVGGTFSTDFTAVDHLERMLSLDNAFDPDELRAWVERVEREVGSSAHYLCELKIDGLAIN 159 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIFLQRE 186 L+YRDGKL +A++RG+G GED T V + VP ++G A ++GE+F + + Sbjct: 160 LLYRDGKLERALTRGDGRTGEDVTLNVRTMDDVPDQLTGTDEYPVPALVEIRGEVFFRVD 219 Query: 187 GHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMS 233 Q N R AG + ++D T L + P+ S Sbjct: 220 EFAQLNASLVEAGKPPFANPRNSAAGSLRQKDPRVTKSRPLRMICHGLGKREGFEPKQQS 279 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK--EPES 289 + L G ++ +T+ + DEV + W + DGVVV+ + Sbjct: 280 ESYAALRAWGLRVSP-HTKVLSTVDEVLEHIDYWGKHRNSAEHEIDGVVVKVDEVSLQRR 338 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A+KY P + IQ AVG++G+++ A + PV + V R + Sbjct: 339 LGATSRAPRWSIAYKYPPEQATTRLLDIQVAVGRTGRVTPYAVMEPVKVAGSTVARATLH 398 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE--RTKPTPPENRFNS-------- 399 + + + + GD++++ AG IP + V + + P + Sbjct: 399 NADQVRHKGVLIGDRVVIRKAGDVIPEVLGPVVDVRDGSEREFVMPTECPDCGTALAHQK 458 Query: 400 ---LTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 + + C Q RL L ++ ++ +G G AL L Sbjct: 459 EGDVDLRCPNSHNCIGQRRERLFQLAGRKAFDIEVLGYEGVSALLSAGVVFDEGDLFDLN 518 Query: 456 PEQLQNT------PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDE 506 E L T G +L A++QP R ++A+ I A + A + Sbjct: 519 EEALLKTTLFRTDDGSLSVNGGKLLANLESAKQQPLWRVLVALSIRHVGPIAARVLAREF 578 Query: 507 RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 S ++ ++E+ G G A V EW + +++ + + + Sbjct: 579 GSLDRIQEASEEELAAGEGVGPTIATAVREWFDVDWHREIVRKWSEAGVRMAD 631 >UniRef50_B2RKL2 DNA ligase n=66 Tax=Bacteroidetes RepID=DNLJ_PORG3 Length = 669 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 117/577 (20%), Positives = 231/577 (40%), Gaps = 52/577 (9%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPP 86 I L++ +++ + Y+ ++D YD + +L + +R + S V Sbjct: 10 RIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVGSDK 69 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYRD 136 G +V H + + + + + R S+ + + K DG++++L+Y D Sbjct: 70 TEGFASVRHDRPMLSLSNTYNYDEIGDFYRRVSEGLQGAPFEIVAELKFDGLSISLIYED 129 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQMG 194 G L +A++RG+G+ G+D T V I +VP + G ++GEI L + + Sbjct: 130 GMLVRAVTRGDGIMGDDVTANVRTIRSVPLRLRGDDYPRMLEVRGEILLPFKEFDRINAQ 189 Query: 195 --------GINARAKVAGLMMRQDDSDTL-NSLGVFVWA-WPDGP--QLMSDRLKELATA 242 N R +G + + D +L + + + D P + DRL + Sbjct: 190 REAEGEPLFANPRNAASGTIKQLDPHIVAGRNLDAYFYYLYSDEPLAENHYDRLMQARQW 249 Query: 243 GFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAE 298 GF ++ T + ++V + + + LP TDG+V++ + + Sbjct: 250 GFKVSDAVTLCC-SKEDVYAFIDRFDTERLTLPVATDGIVLKVNAPAQQDLLGFTAKSPR 308 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W +A+KYQ ++ + + VG++G ++ VA+L PV++ V+R ++ + E D Sbjct: 309 WAIAYKYQAERVRTRLQHVSYQVGRTGAVTPVANLDPVLISGTVVRRASLHNADFIAEKD 368 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGA--ERTKPTPPENRFNS----------LTCYFAS 406 + GD + V G+ IP+I V + + Y + Sbjct: 369 LHEGDFVYVEKGGEIIPKIVGVDTDARSIDGRPIVFTVLCPDCATPLVREQGEAAYYCPN 428 Query: 407 -DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI 465 + C +Q RL ++ + IG L+ + ++ + LT EQL PG Sbjct: 429 AEGCPQQQKGRLEHYCGRKAADI-NIGPETIELLYSRNMIRNVADFYALTEEQLLTLPGF 487 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQ 522 K +A+L ++ +P+ + +GI A A+ S L +T + Q Sbjct: 488 KKRAAAKLLDSIEASKARPYQAILFGLGIRFVGETVAKKLAAVYPSIDALAAATSEELVQ 547 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + G A V+ + Q ++L L ++ Sbjct: 548 IDEIGERIAAAVLHFFSLRQNRELIERLRLAGVSLEA 584 >UniRef50_B1Y6D4 DNA ligase n=26 Tax=Proteobacteria RepID=DNLJ_LEPCP Length = 768 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 114/642 (17%), Positives = 214/642 (33%), Gaps = 102/642 (15%) Query: 15 QSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC 74 A P A A+ L+ ++ Y+ E+ D YD+L L + Sbjct: 21 VGPASAAPPDLQTAAARAAW--LRSTLQHHAHLYYVLDAPELPDAEYDRLFQELQAIEAM 78 Query: 75 FG------SEPRDVMMPPLNGAV--MHPVAHTGVRKMVDKNA--LSLWMRERSD------ 118 + S + V+ +G V H V +R D A + Sbjct: 79 YPALRTADSPTQRVLGQVRDGFVVVRHAVPMLSIRTETDTEASGAVAFDARVRRELELPD 138 Query: 119 ------LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPL 172 + K DG+A+ L Y G L +A +RG+G GED TQ + I +P + Sbjct: 139 DAPPISYATELKFDGLAINLRYEHGVLVQAATRGDGESGEDVTQNIRTIGQIPLRLRWAP 198 Query: 173 --------------------------------ANSTLQGEIFLQREGHIQQQM------- 193 A ++GE++++R+ Sbjct: 199 TLGADAHSLPPEGARFALGRPGGETGAPDLAPAVLEVRGEVYMRRDDFEALNERQRERIA 258 Query: 194 -------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG-----PQLMSDRLKELA 240 +N R AG + + D + L F + + P + L LA Sbjct: 259 RGDKGEKTFVNPRNAAAGAVRQLDPAIAAQRPLSFFAYGLGEVQGWALPHTHAGLLDALA 318 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQ 296 AG + V+ AD + + L F DGVV + ++ + Sbjct: 319 AAGLPVCAE-RAVVQGADGLVAFHQRIGALRDSLAFDIDGVVYKVDSLALQQRLGFVTRE 377 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W VA KY Q+ + I+ VG++GK++ VA L PV + V + + + Sbjct: 378 PRWAVAHKYPAQEQMTRLLGIEIQVGRTGKLTPVARLEPVFVGGTTVSNATLHNEDEARR 437 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP----------PENRFNSLT----- 401 D+ GD ++V AG IP++ VV P +++ Sbjct: 438 KDVRVGDTVIVRRAGDVIPQVVGVVLEQRPDDVGEPFDLYQRLGGRCPVCGSAIARPEGE 497 Query: 402 ---CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ 458 C Q ++ +++++ ++G+G+ L + L + Sbjct: 498 ADWRCTGGLFCAAQRKQAILHFASRRMMDIEGLGDKLVDQLVDAGVIRTLPELYKLGVAK 557 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 L + + + L +++ R++ ++GI A A + +++ + Sbjct: 558 LTALERMGEKSAVNLVAALEKSKQTTLARFLFSLGIRQVGEATAKALARHFGALDRVMDA 617 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + Q +P G A + + + +++ L A I Sbjct: 618 SVDQLQAVPDVGPIVALSIRTFFDQPHNREVVEQLRAAGIHW 659 >UniRef50_C9KKI9 DNA ligase, NAD-dependent n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKI9_9FIRM Length = 675 Score = 601 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 117/584 (20%), Positives = 234/584 (40%), Gaps = 52/584 (8%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 S + ++E++ L++ I+ ++ Y+ E E+ D YDQL RL + + S Sbjct: 9 SIQQVKKELTELRKTIRYHNNRYYNEDNPEISDYEYDQLMLRLKAIEAKYPELITKNSPT 68 Query: 80 RDVMMP---PLNGAVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAV 130 + V V H V ++ + K + ++ E + V+ K+DG+++ Sbjct: 69 QVVGGQARRTAGVLVKHDVPMLSLQDVFSKEEIFAFVEELQQELEAPEFVVEEKIDGLSM 128 Query: 131 TLVYRDGKLNKAISRGNGLK-GEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 L Y DG+L +AI+RG+G+ GED T+ +I V + + L ++GE++++++ Sbjct: 129 ALRYEDGELVRAITRGDGIVQGEDVTENAKVIHDVKKKLKDKLPYFEIRGEVYMEKKAFD 188 Query: 190 QQQ--------MGGINARAKVAGLMMRQDDSDT-LNSLGVFVWAW----PDGPQLMSDRL 236 N R AG + + D T L +F++ ++ Sbjct: 189 AVNARQELLGLKPFANPRNCAAGTLRQLDSRITKERHLSLFIFNLQTARGRTFTTHTEAY 248 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEPES--RHW 292 + G + Y + ADEV + + LP+ DG VV+ + Sbjct: 249 DFMKKQGIKVIHGY-KVCHTADEVWQAITAIGENRGNLPYDIDGAVVKLNNLADREKLGA 307 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 W +A+KY P + ++ I+ +VG++G+I+ A P+ L V+R + + Sbjct: 308 TAKVPRWAIAYKYPPEEKETVIRKIELSVGRTGRITPTAVFDPIRLCGTTVERATLHNQD 367 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-TKP-----TPPENRFNSLT----- 401 D+ GD + V +G+ IP++ +VV T+P T P ++ Sbjct: 368 FIDNLDVRIGDTVRVYKSGEIIPKVKEVVKEKRPAGTEPFVIGTTCPVCGAPAVREPDTS 427 Query: 402 -CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQ 458 + C Q S ++ + + + G+GEA L + I L E+ Sbjct: 428 DIKCKNPSCPAQLESHILNFVGRSAMDIKGLGEAAIHRLIEDGFIATIADLYRLGGKREE 487 Query: 459 LQNTPGIA-KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLF 514 L I + + ++ +++ R + +GIP A S L Sbjct: 488 LIEKGIIGKEKNTDKVLAAIEASKENEPQRLLTGLGIPGIGRTAARELMLHFGSIDALAK 547 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 ++E+ ++ G A+ ++++ + +K+ + A + Sbjct: 548 ASEEEILEVRDMGEISAKAIVQYFNDPASQKILAAFRAAGVNFT 591 >UniRef50_C5AEV0 DNA ligase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AEV0_BURGB Length = 747 Score = 601 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 117/653 (17%), Positives = 215/653 (32%), Gaps = 119/653 (18%) Query: 18 VWAVCPAWSPA-RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 + PA PA + E + L+Q++++ + Y+ + E+ D YD+L L Q + Sbjct: 1 MARTTPADPPASQPSERAAWLRQELERANHAYYVLDQPELLDAEYDRLFRELQQIEAEHP 60 Query: 77 ------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER------------ 116 S + V +G V+H + ++ + + Sbjct: 61 DFITPDSPTQRVGGEAADGFTPVLHDAPMLSLNNGFTDEDIAAFDKRVADALGKAVDLAG 120 Query: 117 ----SDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG-- 170 + + K DG+A++L Y GK +A +RG+G GED T+ V I ++P T+ G Sbjct: 121 TAEPVEYACELKFDGLAISLRYVHGKFTQAATRGDGTTGEDVTENVRTIKSIPLTLKGKH 180 Query: 171 PLANSTLQGEIFLQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVF 221 P A ++GE+ + + + N R AG + + D T L F Sbjct: 181 PPALLDVRGEVLMYKRDFARLNERQRAAEQREFANPRNAAAGSLRQLDSKVTAQRPLSFF 240 Query: 222 VWAWP--DG---PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPF 274 + DG P S L + G + + V+ A+ + + + LP+ Sbjct: 241 AYGIGVLDGAPMPDTHSGLLDWYESLGLPVNRE-RAVVQGAEGLLDFFRKVGEKREALPY 299 Query: 275 VTDGVVVRAA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVAS 332 DGVV + E + ++ + +A K+ + AI+ VG++G I+ VA Sbjct: 300 DIDGVVYKVNRRDEQDRLGFVSRAPRFALAHKFPAQEARTRLVAIEVQVGRTGAITPVAR 359 Query: 333 LAPVMLDDKKVQRVNIGSVRRWQEWDI---------APGD--------------QILVS- 368 L PV + V + + + DI GD Q+ V Sbjct: 360 LEPVFVGGATVTNATLHNEDEVRRKDIRVGDTVIVRRAGDVIPEVVGRDGPHAMQVRVRF 419 Query: 369 ---------------------------------------LAGQGIPRIDDVVWRGAERTK 389 G P + + V + R Sbjct: 420 RGVRTVARRNRLRAAASSGRPMTWKPRLLKPTDRRGIRVRRGCLRPSLFEFVEQEPFRMP 479 Query: 390 PTPPEN-------RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 P ++ C Q L ++ L +DG+GE L + Sbjct: 480 TECPVCGSRIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQ 539 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---A 499 + L L A+ + L AR R++ A+GI A Sbjct: 540 NLVRTPADLFHLGFATLAALDRFAEKSAQNLLDSLEKARHTTLARFIYALGIRHVGESTA 599 Query: 500 ALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 A + ++ ++ ++ G A + ++ + + + L Sbjct: 600 KDLAKHFGALQPIMDASIDALLEVNDVGPVVAESLHQFFAEEHNRTVIAQLRE 652 >UniRef50_A2RIF3 DNA ligase n=7 Tax=Streptococcaceae RepID=DNLJ_LACLM Length = 686 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 117/604 (19%), Positives = 224/604 (37%), Gaps = 78/604 (12%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVM 83 + +I L Q+ Q+ +Y+ + VED YD L L + ++ S Sbjct: 3 IESKIKELTDQLNQFAYEYYTLDEPSVEDSEYDHLYHELVKLEQENPQLVRADSPTHRTG 62 Query: 84 MPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVTLVYR 135 L+G HP + + + L+LW + + K+DG++++L Y Sbjct: 63 GVILDGFVKFRHPYNLYSLGDVFSREELALWEERVRKEIVNPEYICELKIDGLSLSLYYE 122 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG- 194 +G L A +RG+G GE+ T+ V I VP + + + ++GE +L R+ + Sbjct: 123 NGLLVTAATRGDGTTGENITENVKRIKDVPLKLKEAI-DIVVRGEAYLPRQNFAKLNAER 181 Query: 195 -------GINARAKVAGLMMRQDDSDTLNS-LGVFVW--AWPDGPQLMSDRLKELATAGF 244 N R AG + + D L F++ A P + L+ GF Sbjct: 182 ELEGAAPFANPRNAAAGTLRQLDTKIVAKRGLATFLYQEASPATNDTQEEVLEYFEELGF 241 Query: 245 TLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWL 300 + + +N DE+ E + ELP+ DGVV++ E + W Sbjct: 242 QVNPE-RKFARNLDEIWEFIEEATRLRDELPYDIDGVVIKVNNLAEQEELGFTVKAPRWA 300 Query: 301 VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA 360 +A+K+ E+ ++ + VG++G ++ A++ V+L V R + +V QE DI Sbjct: 301 IAYKFPAEQAETEILSVDWTVGRTGVVTPTANMTAVLLAQTTVARATLHNVDYIQEKDIR 360 Query: 361 PGDQILVSLAGQGIPRIDDVVWRGAERT-------------------------------- 388 D++++ AG IP++ V+ + Sbjct: 361 NHDKVMIYKAGDIIPKVGKVLLEKRKPARHLRKTHRANKYVWTRFGRRSVEKGLVFSKRE 420 Query: 389 -----KPTPPENR-------FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 PT + + + +C Q +L+ ++ + + G+G + Sbjct: 421 DNRVKIPTQCPECDSDLIHFEDEVALRCVNPLCPAQIREKLIHFASRDAMNIVGLGPSVI 480 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 L + LT E L + ++ + ++ +R+ + + +GI Sbjct: 481 SQLFDKKLVTDVADLYQLTVEDLLTLDKVKETLAQKIVSAIAQSRENSAEKLLFGLGIRH 540 Query: 497 TR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 A L + L ++E+ ++P G A V+ + E A K L L Sbjct: 541 VGGKAAKLLLERFANLRALSQASEEEISEIPSLGGVIATAVVSYFETAGAKTLLDELENA 600 Query: 554 QITG 557 + Sbjct: 601 GLNF 604 >UniRef50_Q0RDH8 DNA ligase n=7 Tax=Actinomycetales RepID=DNLJ_FRAAA Length = 771 Score = 599 bits (1546), Expect = e-170, Method: Composition-based stats. Identities = 124/573 (21%), Positives = 217/573 (37%), Gaps = 50/573 (8%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 + + L +++ + Y+ V D YD+L LT + S + V Sbjct: 60 RARAAELARELDEHAYRYYVLDSPTVSDAEYDRLMRELTALEEHHPELRTPDSPTQKVAG 119 Query: 85 P--PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGVAVTLVYRD 136 L V H + + D + LW + + K+DG+AV LVY + Sbjct: 120 SYSTLFTPVEHLERLLSLDNVFDDDEFHLWAARAARETEVDGWLCELKIDGLAVDLVYEE 179 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQ-- 192 G+L +A +RG+G GED T + +++VP + G ++GE+F E + Sbjct: 180 GRLVRAATRGDGRTGEDITPNIRTLASVPTRLRGASVPELLEVRGEVFFPTEKFAELNAS 239 Query: 193 ------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLKELAT 241 N R AG + ++D T L + V S A Sbjct: 240 LVAGGGKPFANPRNAAAGSLRQKDPRVTATRPLDMIVHGLGAQRGFDAASQSAAYARFAE 299 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQA 297 G ++ T+ + + +V + W + ++ DGVVV+ Sbjct: 300 FGLPVS-THFEVLASVGDVLAFIHRWGRARHDVEHEIDGVVVKVDAFALQRRLGSTSKAP 358 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 W VA+KY P +++ I+ VG++G+++ L PV++ V + +V Sbjct: 359 RWAVAFKYPPEEVTTKLRDIRVNVGRTGRVTPFGELEPVLVAGSTVGLATLHNVDEVGRK 418 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAERTK-----PTPPENRFNSLTC-------YFA 405 + GD +++ AG IP I V + T+ PT L Sbjct: 419 GVLIGDTVVLRKAGDVIPEIVGPVVDLRDGTERAFVMPTHCPECGTELVRPEGEVDIRCP 478 Query: 406 S-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 + D C Q + L ++ L +DG+G AL + R I LTPE + G Sbjct: 479 NTDACPAQLRELIFHLASRNALDIDGLGYETAIALLEADRVGDIGDIFHLTPESFEGLRG 538 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 + K Q+ AR +P R ++ + I A A + RS + + + Sbjct: 539 FGQKKIDQILRGVEAARHRPLWRLLVGLSIRHVGPTAARALARELRSLDAIAAAPAEQLA 598 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQ 554 + G G A V++W +A+ + + + +AA Sbjct: 599 AVEGVGPKIASAVVDWFADARHRDIVARIAAGG 631 >UniRef50_A7IG64 DNA ligase n=56 Tax=Bacteria RepID=DNLJ_XANP2 Length = 720 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 129/617 (20%), Positives = 220/617 (35%), Gaps = 84/617 (13%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 SPA A E L Q+I D Y++E V D YD L R + F S Sbjct: 23 DLSPAEAASEHKALAQEITGHDAAYYREDAPVVSDAEYDALRHRYEAIEERFPGLRGEDS 82 Query: 78 EPRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPK 124 V P G V H V + + ++ +PK Sbjct: 83 LSEKVGAAPSEKFGKVAHKVPMLSLANCFSDEEVVEFVARVKRFLNLGPDDEVAFTCEPK 142 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIF 182 +DG++ +L Y +G+L A +RG+G +GED TQ V I+ +P+ ++G ++GE++ Sbjct: 143 IDGLSCSLHYENGRLTVAATRGDGSQGEDVTQNVRTIADIPERLAGKGVPQTIDVRGEVY 202 Query: 183 LQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG----P 229 + + N R AG + + D S T L F +AW + Sbjct: 203 MAKADFEALNARQAAAEEKVFANPRNAAAGSLRQLDSSITASRPLKFFAYAWGEASDLPA 262 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEP 287 + ++ A GFT K+A + E +A L + DGVV + Sbjct: 263 ETQFGVVEAFARWGFTTNPLMV-VAKDAAGLIAHYRSIEAQRALLGYDIDGVVYKVNSLE 321 Query: 288 ES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 ++ W +A K+ ++ I+ VG++G ++ VA L PV + V Sbjct: 322 LQRRLGFVSRSPRWAIAHKFPAEQATTVLEDIEIQVGRTGALTPVAKLTPVTVGGVVVSS 381 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TKPTPPENRF--- 397 + + D+ GD ++V AG IP++ V+ PT Sbjct: 382 ATLHNEDEIARKDVRIGDTVVVQRAGDVIPQVVRVIEEKRPAGSKPYEFPTHCPACGSHA 441 Query: 398 -----------NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFE 446 +++ +C Q + RL ++ ++G+GE RA ++ Sbjct: 442 VREVDTKSGKVDAVRRCTGGLICPAQMVERLRHFVSRNAFDIEGLGEKQVRAFYEWGLIA 501 Query: 447 HIFSWLLLT------PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR-- 498 L ++L+N G K+ +A L+ R R+V A+GI Sbjct: 502 SPADIFTLETRNARSLQRLENRDGWGKTSAANLFAAIAERRTVAVDRFVFALGIRHVGET 561 Query: 499 -AALNASDERSWSQLL----------------FSTEQFWQQLPGTGSGRARQVIEWKENA 541 A + L Q + G G A VIE+ Sbjct: 562 NAKRLMRHYGTVEALEAGALAAVIPGEEHPKGNEAWQEMIGIDGIGDVVAEAVIEFFGEP 621 Query: 542 QIKKLGSWLAAQQITGF 558 + +++ + L + +T Sbjct: 622 RNREVVTALLKE-VTPE 637 >UniRef50_A6Q433 DNA ligase n=33 Tax=Epsilonproteobacteria RepID=DNLJ_NITSB Length = 660 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 116/572 (20%), Positives = 233/572 (40%), Gaps = 48/572 (8%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 +E +++K+W Y+ EV D VYD+L + ++++ S + + Sbjct: 6 QEYKEAVEKLKRWAYAYYVLDNPEVPDEVYDKLYREVEEYEKAHPDQIDPTSPTQRIGAE 65 Query: 86 PLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYR 135 P + H + + ++ + W+ +++PK DG ++ L+Y Sbjct: 66 PAKEFKKIKHLSKMWSMEDVFNQREMHEWLERVYKNAGRKDLQFYIEPKFDGASLNLIYE 125 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG- 194 +G L A +RG+G GED T I ++P + ++GE+ ++++ + Sbjct: 126 NGLLKSAATRGDGEVGEDVTANAKTIPSIPLGIDYK-GLIEIRGEVVIRKDDFEKLNHER 184 Query: 195 -------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG---PQLMSDRLKELATAG 243 N R AG + + D T L + W + +++ + G Sbjct: 185 ALKGESTFANPRNAAAGSLRQLDPKVTAQRKLYFYPWDIGYNTLNFKYQHEKMDFVYQQG 244 Query: 244 FTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEW 299 F + +N +E+ ++ E+ + +LP + DG+VV+ + E + W Sbjct: 245 F-IKPFKRAICENEEEIQQLYEEFSKERDKLPVMLDGMVVKVDEIALHEILGYTVKYPRW 303 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +VA+K+ V ++ + I VG++G I+ VA L PV ++ V+R + + + DI Sbjct: 304 MVAYKFPAVEKMTRIIDIVPQVGRTGVITPVAILEPVEIEGVVVERATLHNYAEIERKDI 363 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGA-------ERTKPTPPENRF---NSLTCYFASDVC 409 GD ++V +G IP + V+ + ER K P + + + C Sbjct: 364 RIGDMVIVIRSGDVIPEVTKVLTQYRTGKEKKVERPKVCPVCGQPVLDEGILIKCQNLSC 423 Query: 410 QEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSK 469 + ++ +++ +KQ L + G+GEA + L++ + + L E L PG A+ K Sbjct: 424 PARVVNSIIYFASKQCLDISGLGEATVKLLYEKGLVKDVVDLFKLKKEDLLRLPGFAEKK 483 Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWS-QLLFSTEQFWQQLPGTGS 528 + L + R+V A+GI + + + ++ ++ G G Sbjct: 484 AQNLIDATQSVKGVECWRFVNALGIEHIGEVASKKLCEKFGLDWYKAPKEKLYEIEGFGP 543 Query: 529 GRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 R + E+ E K+ L + EP Sbjct: 544 EMVRSIEEFVEV--NKEKIEKLIEL-LQPTEP 572 >UniRef50_C4DQQ1 DNA ligase, NAD-dependent n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DQQ1_9ACTO Length = 749 Score = 597 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 118/652 (18%), Positives = 219/652 (33%), Gaps = 110/652 (16%) Query: 16 SSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 + P A+E ++L +I + Y ++ ++ D YD L L + Sbjct: 5 VTAAEQVPD-DFDAARERHTKLAAEIDRHRQLYHRDDAPQISDAEYDALMRELLAIEEAH 63 Query: 76 G------SEPRDVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMRERSD------LWV 121 S + V L +V H + L+ W+ + Sbjct: 64 PVLATQDSPSQQVGGDVSELFASVRHAERLYSLDNAFSPEELTAWVERVTAEVPGEAYLC 123 Query: 122 QPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANST 176 + K+DG+AV L Y +G L + +RG+G GED T V I+++P+ + G Sbjct: 124 ELKIDGLAVNLTYENGVLVRGATRGDGTTGEDITPNVRTIASIPEKLKGTKKYPVPEFVE 183 Query: 177 LQGEIFLQREGHIQQQMG----------------------------GINARAKVAGLMMR 208 ++GE+F+ E + N R AG + + Sbjct: 184 IRGEVFMSTESFEKLNADRLAENERITAANEERKAEGKRLQKLLPLYANPRNAAAGSLRQ 243 Query: 209 QDDSDTLNS-LGVFVWAWPD----GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARV 263 +D + T + L + V+ + P S L G + +Y + + + V Sbjct: 244 KDPTITASRALSMTVYGFGARRGFEPTHQSQGYAALKAWGLPTS-SYFKVLDTVEGVTEY 302 Query: 264 RNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQF 319 + + ++ DGVV++ W +A+KY P ++ I+ Sbjct: 303 IEHYGEHRHDIEHEIDGVVIKIDDIAVQRRLGSTTRAPRWAIAYKYPPEEVTTTLRDIKV 362 Query: 320 AVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDD 379 +VG++G+ + A L PV + +V+ + + + + GD++++ AG IP + Sbjct: 363 SVGRTGRATPYAVLEPVRVAGSEVEFATLHNQDIVKAKGVLIGDRVIIRKAGDVIPEVLG 422 Query: 380 VVW--RGAERTKPTPPENRFNS-----------LTCYFASD-VCQEQFISRLVWLGAKQV 425 V R + + P N + + C Q RL +L + Sbjct: 423 PVEGARTGDEHEFVMPSNCPECGTELRQMSEGDIDLRCPNARSCPAQLRERLSYLTGRSC 482 Query: 426 LGLDGIGEAGWRALHQTHRFEHIF-----SWLLLTPEQLQNT---------------PGI 465 L +DG+G AL Q + LT EQL P Sbjct: 483 LDIDGLGYVACTALVQPLEPKQPPLADEGDLFNLTMEQLLPIKSLVLDPDSGLPKKDPKT 542 Query: 466 AKSK---------------SAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDER 507 K K + ++ A++Q R + + I A A++ Sbjct: 543 GKDKEVTYFATQDGAPKAGATKMLEGIEAAKQQELWRIINGLSIRHVGPVAARALATEFG 602 Query: 508 SWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + + E+ + G G A V +W ++ A + E Sbjct: 603 DLDAIRDADEERLAAVDGVGPTIATAVKQWFAEDWHVEILEKWRAAGVRFVE 654 >UniRef50_UPI0001C30ED5 DNA ligase, NAD-dependent n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30ED5 Length = 684 Score = 597 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 119/589 (20%), Positives = 215/589 (36%), Gaps = 55/589 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S + + L++++ Y+ E+ D YD L L + S Sbjct: 1 MSAGPDAQRAAVLRRELAYHGHRYYDLDDPEIGDDAYDALLDELRALEAAHPELLTPDSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR-------------ERSDLWVQP 123 + V ++ V H + + L W+ R + V+P Sbjct: 61 TQRVGGAVVSELRKVRHRRRMLSLANARSEQELLAWVERMRAHLAREGIEDPRFEYVVEP 120 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 KVDG+A++L Y +G L + ++RG+G GED T + I +PQ + G A ++GE+++ Sbjct: 121 KVDGLAMSLHYENGTLIRGVTRGDGEIGEDVTHNIRTIEQIPQQIDGAPAWLEVRGEVYM 180 Query: 184 QREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQ 230 +N R AG + + D L ++ + + Sbjct: 181 SLADFEALNLRRAEEGRSTFMNPRNSAAGTIRQLDSRLAAERPLSMWCYGIGETEGISFS 240 Query: 231 LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KE 286 + L+ L GF + R + A++V W + L F DGVVV+ + Sbjct: 241 THWESLQWLRAHGFPVNDEIRRI-RTAEKVVARCERWQERRGSLDFEIDGVVVKVDDVEL 299 Query: 287 PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 + W +AWK+ P V ++ + + VGK G + A L PV + V+ Sbjct: 300 QRRLGVVGRDPRWAIAWKFPPTTAVTQLHDVMWNVGKFGTLHPFAVLEPVHVGGVTVKLA 359 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER----TKPTPPENRFNS--- 399 + + D+ PGD ++V AG IP++ AER P PP Sbjct: 360 TLHNEEDLARKDVRPGDDVIVLRAGDVIPQVLSPAPHVAERSDRAPVPRPPARCPVCDTP 419 Query: 400 ------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + + C + L ++ + +DGIGE L + + Sbjct: 420 TVKGEGVFTKCPNRDCPGRRWQLLQHYVSRGAMDVDGIGEKQVSVLMEHGLLRTPGDYYR 479 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWS 510 L+ EQL + + ++++PF R + +GI + A R+ Sbjct: 480 LSAEQLMQLDRFGEVSARNAVEAIAASKERPFGRVLFGLGIEGVGSVTGRSLAQRFRTID 539 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 L ++ + PG G R + + + ++ + L A + E Sbjct: 540 ALTAASAEEIAATPGIGPIVGRLIHDQLRDEHLRAVIDDLRAHGVRMEE 588 >UniRef50_C9RJM8 DNA ligase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJM8_FIBSS Length = 715 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 108/585 (18%), Positives = 229/585 (39%), Gaps = 62/585 (10%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 + L++Q+++ Y+K+G S + D +D + + + S + V Sbjct: 9 RTRYFELKKQLEEASRLYYKDGVSPMSDQDFDFGLKEMEALEAKYPELRGKGSLTQKVGS 68 Query: 85 P--PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD-------------LWVQPKVDGVA 129 V H V + + + + +++ + + K+DGV+ Sbjct: 69 DLTNDFAKVAHAVPMLSIANVYSEEEMREFVKAAEEGLSSFVSRLSSKKWICERKIDGVS 128 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVP-----QTVSGPLANS-----TLQG 179 ++++Y +G+L +A +RG+G +G+D T I+ +P + + + ++G Sbjct: 129 LSVIYENGRLKQAATRGDGAQGDDVTLNALTIADIPEYFDAKKLKIDPSEIPQGTFEVRG 188 Query: 180 EIFLQREGHIQQQMGGI--------NARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDGP- 229 E++++RE + I N R V+G + + ++ + F + P Sbjct: 189 EVYMEREAFERLNEQFILENKKTFQNCRNTVSGSLKLKSVAECKTRPMRFFAYHIPQSNN 248 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP 287 + + LK+L GF +T DE+ + + + LPF DG+VV+ Sbjct: 249 KTHEENLKQLKRLGFHTNDYWT--ADTVDEIMAISEKIGASRDSLPFDIDGMVVKLNDLQ 306 Query: 288 ES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + W +A+K++ + +++F VG++G ++ VA+LAPV L V+R Sbjct: 307 QQRELGSTSKSPRWAIAYKFKAERAYTPLLSVEFQVGRTGAVTPVANLAPVRLAGTTVKR 366 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE--RTKPTPPENRFNS---- 399 + + D+ GD + V G+ IP+I DV + PE Sbjct: 367 ATLHNFDEVARLDLHYGDTVGVEKGGEIIPKITDVKRELRPAGASPVVAPEKCPVCGEQL 426 Query: 400 ------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + + C+ Q +++ + ++ +G A +L T + + I Sbjct: 427 THIDGEVILRCENLHCKAQVQCLFEHFVSREAMNIENLGPALIASLLATGKIKRIPDLYR 486 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWS 510 LT E L++ +AK + ++ ++++ + +GI A A R+ Sbjct: 487 LTLEDLESQERMAKKSAKNVFDAIQASKQRSLENLLHGLGIRFVGRTSARNIAKHFRTLE 546 Query: 511 QLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 ++ +T + Q + G + V E+ L A + Sbjct: 547 KIRTATVEELQNVTDVGERIGKSVYEFFHTPLYTNEIDELVALGL 591 >UniRef50_B2UB00 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_RALPJ Length = 817 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 119/625 (19%), Positives = 207/625 (33%), Gaps = 94/625 (15%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 S R + + L+ ++ ++ +Y+ + V D YD+L L + S Sbjct: 13 SKDRPEARAAWLRAELNRYAHEYYVLDQPSVPDVEYDRLYRELEALETEHPELKTPDSPT 72 Query: 80 RDVMMP--PLNGAVMHPVAHTGVRKMVD--KNALSLWM------------RERSDLWVQP 123 V P AV H + +R D N + + + Sbjct: 73 LRVGGAVLPEFAAVRHVIPMLSIRTETDTTANGARAFDASVRRELGLDDTDPPVEYAAEL 132 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS----GPLANSTLQG 179 K DG+A+ L Y G L +A +RG+G GED TQ + I +P +S ++G Sbjct: 133 KFDGLAINLRYERGYLVQAATRGDGTTGEDVTQNIRTIRQIPLGLSPVDGHVPDVLEVRG 192 Query: 180 EIFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD--- 227 E++++R+ + +N R AG + + D L F + + Sbjct: 193 EVYMRRDDFEKLNARQRERGDKTFVNPRNTAAGAVRQLDPKMAAERPLSFFAYGLGEVAG 252 Query: 228 ---GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVR 282 P S L L GF ++ AV + + R + LPF DGVV + Sbjct: 253 WKGMPGTHSSMLDVLQAFGFPVSNE-RAAVAGGEGLVRFHEAIRAKRDSLPFDIDGVVYK 311 Query: 283 AAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 + + W VA KY + V++I VG++G I+ VA L PV + Sbjct: 312 VNSLALQRELGFRSREPRWAVAHKYPAQEALTTVESIDVQVGRTGAITPVARLVPVFVGG 371 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE-------------- 386 V + + + D+ GD ++V AG IP + VV Sbjct: 372 VTVTNATLHNEDEVRRKDVRVGDTVIVRRAGDVIPEVVSVVLDRRPLDDVPGSDLFNPQQ 431 Query: 387 -------RTKPTPPENRFNSLT-------CYFASDVCQEQFISRLVWLGAKQVLGLDGIG 432 T P + + C Q + ++++ ++G+G Sbjct: 432 QPKYPPFELPKTCPVCGSHVVREEGEAVARCSGGLFCSAQRKEAIRHFAGRRMMDIEGLG 491 Query: 433 EAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAK-----------------SKSAQLWH 475 E L + I LT E A + L Sbjct: 492 ERYIDNLVELDYVHGIADLYKLTLEDFLEMKRRADERDGVTPETVSAGKIATKWAENLLE 551 Query: 476 QFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRAR 532 ++ P R++ A+GI A A S + + + LP G+ A Sbjct: 552 GIQASKTPPLARFLFALGIRHVGESTAKTLADWLGSLAMIRRAPAPLLLALPDVGATVAE 611 Query: 533 QVIEWKENAQIKKLGSWLAAQQITG 557 + ++ + ++ L + Sbjct: 612 AIADFFAEPKNQQALDALLEAGVAP 636 >UniRef50_A0JUH2 DNA ligase n=38 Tax=Actinomycetales RepID=DNLJ_ARTS2 Length = 790 Score = 596 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 115/629 (18%), Positives = 221/629 (35%), Gaps = 96/629 (15%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 +EE L +++++ Y++E + D +D+L RL + S Sbjct: 47 PSGAVREEYENLVEEVRKHRFAYYQEDAPIISDAEFDELFRRLETIEAMHPELVANDSPT 106 Query: 80 RDVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMRER-------------SDLWVQPK 124 ++V AV H + + L W+ + + K Sbjct: 107 QEVGGEVSAAFAAVEHLQRMYSLEDVFSLEELESWIAKAEASVAKLGNGTAGPAWLTELK 166 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIF 182 +DG+AV L+YRDGKL +A +RG+G GED T V I +PQ ++G A ++GE+F Sbjct: 167 IDGLAVNLLYRDGKLVRAATRGDGYTGEDITHNVLTIKEIPQQLTGGNYPAEMEVRGEVF 226 Query: 183 LQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ--- 230 + + + N R AG + ++D ++T L ++V Sbjct: 227 IPSKAFAEYNEALIEAGKAPLANPRNAAAGSLRQKDPAETAKRPLRMYVHGIGAREGLRT 286 Query: 231 -LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP 287 SD ++LA G + Y + + ++ + + L DG+VV+ Sbjct: 287 VSQSDTYRQLAEWGLPTSP-YFEVLGSLKDILDFIKRYGDKRHSLTHEIDGIVVKVDDFA 345 Query: 288 ES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 + W VA+KY P ++ I VG++G+++ + PV + V Sbjct: 346 TQRALGYTSRVPRWAVAYKYPPEEVHTKLLDIAVNVGRTGRVTPFGIMEPVKVAGSTVGM 405 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP-----TPPENRFNS- 399 + + + + GD +++ AG IP I V ++ P P Sbjct: 406 ATLHNQDVVKAKGVKIGDIVVLRKAGDVIPEIVGPVLALRDQQDPPVRDFVMPTECPACG 465 Query: 400 ----------LTCYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHR---- 444 + + C Q R+ + ++ ++ +G AL Q Sbjct: 466 TPLAPGKEGDVDIRCPNSRSCPAQLRERVFHVASRGAFDIEALGWEAAIALTQPAEPVTP 525 Query: 445 -FEHIFSWLLLTPEQLQNTPGIAKSK------------------------------SAQL 473 + LT E L + + + + +L Sbjct: 526 PLTSEANLFRLTREDLADVRIRREKRSKGVATGEFELVPYFYTKGTAKSPSKPTATTEKL 585 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGR 530 + + A+ QP R ++A+ I + A+ S + ++E+ + G G Sbjct: 586 FTELEKAKSQPLWRVLVALSIRHVGPRASRALATAFGSMDAIREASEEELAHVDGVGPVI 645 Query: 531 ARQVIEWKENAQIKKLGSWLAAQQITGFE 559 A + EW +++ A + + Sbjct: 646 AAALKEWFAEDWHREIVDTWAEDGVRMED 674 >UniRef50_A5FWJ5 DNA ligase n=1 Tax=Acidiphilium cryptum JF-5 RepID=DNLJ_ACICJ Length = 682 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 105/579 (18%), Positives = 201/579 (34%), Gaps = 55/579 (9%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR---DVM 83 PA + ++ L +++ D Y+++ ++D YD L + V Sbjct: 11 PADPKARLAELVERLAAADAAYYRDDAPIMDDAAYDALRREAESLRAAHPDLAAALDQVG 70 Query: 84 MPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDL----------WVQPKVDGVAVT 131 P G V H + + + + + +PK+DG++++ Sbjct: 71 AAPSGAFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVAEPKIDGLSIS 130 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGHIQ 190 L Y + + + +RG+G +GED T+ + + +P T+ ++GE+++ + I Sbjct: 131 LTYENRRFVRGATRGDGTEGEDVTENLRTLRELPATLPDDAPDFIEIRGEVYMTKTDFIT 190 Query: 191 QQMG----GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGP----QLMSDRLKELAT 241 G N R AG + + D + T L +F +A + D L L Sbjct: 191 LNQGQARQFANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQAVGETHWDYLAILRR 250 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQAEW 299 GF + R + E + +A L + DGVV + + W Sbjct: 251 WGFPVNPLAERVSEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQERLGFAGRAPRW 310 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 VAWK+ + + I VG++G ++ A L PV + V + + D+ Sbjct: 311 AVAWKFPAERALTTLLGIDIQVGRTGALTPRARLDPVNVGGVLVSHATLHNEDEIARKDV 370 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERT--KPTPPENRFNS-----------LTCYFAS 406 GD + + AG IP+I + P++ + Sbjct: 371 RIGDTVELQRAGDVIPQILRALPERRPADSVPFVFPDHCPVCGALAIRPAGEVVRRCTGG 430 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTPG 464 C Q + RL+ ++ ++G+GE + H E L + G Sbjct: 431 LSCPAQVVERLIHFCSRLAFDIEGMGEKTVQEFHGLGWLESPADIFTLRDREAAIAALEG 490 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ--- 518 + + +L + R+ R++ A+GI A L A S++ E+ Sbjct: 491 WGEVSARKLIAAIDARRRISLARFIYALGIRRIGEQNAKLLARHYSSYAVWRRQMEEAGV 550 Query: 519 -------FWQQLPGTGSGRARQVIEWKENAQIKKLGSWL 550 + G G A ++ + + L L Sbjct: 551 IGSDARLELGSISGIGPSIAEELAGFFAEPHNRDLLDRL 589 >UniRef50_Q18E49 DNA ligase n=9 Tax=Halobacteriaceae RepID=DNLJ_HALWD Length = 736 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 122/575 (21%), Positives = 231/575 (40%), Gaps = 44/575 (7%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEP 79 S A E+ ++L++ I++ D Y+ + D YD L RL + F S Sbjct: 69 LSEEAAVEQATQLREAIREHDYQYYIRASPIIADRAYDILFDRLQALEDIFNLDTEASPT 128 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE------RSDLWVQPKVDGVAVT 131 R V PL+ V H + + + +++ + + +PK DG++V Sbjct: 129 RRVGGEPLDELETVEHVTSMLSIDQSTAVDSVRDFDERVRDVVGDLEYICEPKFDGLSVE 188 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGHIQ 190 ++Y DG+ +A +RG+G +G+D T +V + AVP + G + ++GE+++ + G + Sbjct: 189 VIYEDGEYIRAATRGDGNRGDDVTAQVETVGAVPLKLHGDYPSYLAVRGEVYMPKAGFRE 248 Query: 191 QQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQL---MSDRLKE 238 N R AG + + D L F + D +L L + Sbjct: 249 YNRERIECDEKPFANPRNAAAGTLRQLDPGVVAERPLSCFFYDILDATELPPDQWTTLND 308 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKE--PESRHWLP 294 L + G +R V + D+ R++ +AEL + DG V++ E Sbjct: 309 LQSWGLRTNDRISR-VDSIDDAIAYRDQLKAARAELNYEIDGTVIKVNDRGNREILGATS 367 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 W A+K+ P A++ + I VG++G+++ VA L PV + V R ++ + Sbjct: 368 RSVRWAFAYKFPPRAEITHITDIVVQVGRTGRLTPVALLDPVDVGGVTVSRASLHNPEEI 427 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS---------LTCYFA 405 + + GD++ V AG IP + +V + A T P L Sbjct: 428 KRLSVNSGDEVRVRRAGDVIPEVAEVTQKRATGT-FNFPNQCPICHSSVEQDGPLAFCTG 486 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI 465 C Q + +V G++ L +DG+GE L ++ + L+ L G Sbjct: 487 GLTCDAQLVRTIVHYGSRSALDIDGLGEQRVEQLVESGVIGELADLYTLSVADLSKLDGW 546 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQ 522 + + L + + T +++ +GIP A A ++ ++ + E ++ Sbjct: 547 GTTSAENLIQAISETQTPSLTDFLVGLGIPEVGPTIARNLAGTFDNFDAIIDADEAALRE 606 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + G + + E+ N Q + L + +T Sbjct: 607 IEDIGPTVSTHISEFFTNEQNRAAIDNLLSAGVTP 641 >UniRef50_Q2SRE1 DNA ligase n=5 Tax=Mollicutes RepID=DNLJ_MYCCT Length = 668 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 105/582 (18%), Positives = 218/582 (37%), Gaps = 51/582 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S + I++L++Q+ W Y+ + V+D YD L + + S Sbjct: 1 MSKEQILLRINQLKEQLNLWSKQYYVDDNPSVDDTEYDLALKELISLENLYPEFITSDSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGV 128 + V + H + + + + + + ++ + K+DG+ Sbjct: 61 SQKVGGTVSEKFLKITHKTPMLSLGNVFNFDEFLEFNTQVSKVSNNLNNEYVAELKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 +++LVY +G L A +RGNG+ GED T V I ++P +S ++GEI+L + Sbjct: 121 SISLVYENGVLVSAATRGNGVIGEDVTTNVRTIKSIPLKISKK-ERVEVRGEIYLSKAEF 179 Query: 189 IQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP--DGPQ-LMSDRL 236 + IN R AG + + D +L F++ + D P + + Sbjct: 180 EKINQKRLLNNEDLFINPRNAAAGTLRQLDSKIVASRNLDAFLYYYISDDSPNLNQYESI 239 Query: 237 KELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHW 292 +L GF + T KN D++ +++ K +L + DG+V + + + Sbjct: 240 LKLNQLGFKTNKE-TMLCKNLDQIKAYIDKYTNLKNDLDYQIDGIVFKINDKNLQNSLGF 298 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 +W +A+K+ + ++ I VG++GKI+ A L PV L + + + Sbjct: 299 TSKIPKWAIAYKFPAEIKQTKLLDIFATVGRTGKITYNAKLEPVFLMGATISAATLNNAE 358 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE-----RTKPTPPENR-------FNSL 400 + D+ + + AG IP + + + N N + Sbjct: 359 YIKSKDLRINSIVKIKKAGDVIPEVIEAIKDETFYNLEVFQPILYCPNCHSLLEKNENEV 418 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQ 458 + + C + + L +++ + + +G+ L ++I L +Q Sbjct: 419 DQFCINSSCSMKILRSLQHFSSREAMNIVSLGDRSLEILFNLEIIQNISDIYKLEEYKDQ 478 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 + L N+++ + + +GI A + A ++ L+ + Sbjct: 479 ILAIENFGLKSYLNLIDSINMSKNNSLEKVLFGLGIRHIGSKTAKILARKYQNIDNLMKA 538 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + Q+ G A +I+W + KL + L + I Sbjct: 539 SYDELIQINSIGESLALSIIDWFKIEDNLKLINELKSFNINF 580 >UniRef50_A1B9F5 DNA ligase n=54 Tax=Bacteria RepID=DNLJ_PARDP Length = 765 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 122/648 (18%), Positives = 209/648 (32%), Gaps = 123/648 (18%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 A+ E +RL +++ Q + Y++E + D YD RL + + F S Sbjct: 28 LDVKAAEAEHARLSEEVAQANLAYYQEDAPFISDAEYDASKRRLEEIEARFPDLAHSGSP 87 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPKV 125 V P V H + + + + +++ +PK+ Sbjct: 88 TAQVGAAPDTRFAKVPHRLPMLSLENGFSQGDVEAFVQRVRSFLNLASGAPLEVTAEPKI 147 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFL 183 DG++++L Y G+L +A +RG+G GE+ T I+ +P +SG ++GE ++ Sbjct: 148 DGLSLSLRYEGGRLVQAATRGDGAVGENVTANARTIADIPGQLSGDGYPEVLEIRGECYM 207 Query: 184 QREGHIQQQMG-----GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMS 233 E + N R AG + + D S T L F +AW + Sbjct: 208 SHEDFEKLNQSETGRVFANPRNAAAGSLRQLDPSVTAARPLRFFAYAWGEVSASFAGTQM 267 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES-- 289 + ++ + GF TR + E+ E +A L + DGVV + Sbjct: 268 EAVRRMQAFGFQTNP-LTRICASVSEMLSAWAEIEQMRATLGYDIDGVVYKVNDLAYQAR 326 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A K+ ++AI VG++G +S VA L PV + V + Sbjct: 327 LGMRSTTPRWALAHKFPAERAWTRLEAIDIQVGRTGALSPVARLHPVTVGGVVVSNATLH 386 Query: 350 SVRRWQ-----------EWDIAPGDQILVSLAGQGIPRIDDV--VWRGAERTKPTPPENR 396 + DI GD + V AG IP++ DV R +E P Sbjct: 387 NEDYIAGRGADGSEIRGGKDIRIGDWVEVYRAGDVIPKVADVDLAKRPSEAEPYAFPTTC 446 Query: 397 FNS-----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRF 445 + +C Q + +L ++ ++G+G L + Sbjct: 447 PECGSPAIREEGDSVRRCTGGLICPAQAVEKLRHFVSRAAFDIEGLGAKLVEELFRDGWI 506 Query: 446 EHIFSWLLLTPE-------QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR 498 L QL+N G + +A L+ R+ P R + A+GI Sbjct: 507 AEPADIFTLQDRYGPGQLTQLKNREGWGEKSAASLFQAIEKRREIPLARLLFALGIRHVG 566 Query: 499 ---AALNASDERSWSQLL-------------------------------------FSTEQ 518 A A SW L + Sbjct: 567 EVAAQDLARHYGSWEALEIALDTARPAALAHRVAEDAALAEREAARAEGRRARPSEARAA 626 Query: 519 FWQQL----------------PGTGSGRARQVIEWKENAQIKKLGSWL 550 Q+ G G A + + N + + L Sbjct: 627 ALAQVDLSPEATAAWTGLIAADGIGPVLAMSLSDAFANERERAAIDRL 674 >UniRef50_C2M9J9 DNA ligase, NAD-dependent n=3 Tax=Bacteria RepID=C2M9J9_9PORP Length = 679 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 122/593 (20%), Positives = 220/593 (37%), Gaps = 60/593 (10%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 +P + EI +L++ I+Q + Y+ + + D YD L RL + S Sbjct: 1 MTPNSTELEIEQLRKTIEQHNRAYYLDNAPTISDADYDALMQRLLTLEAEHPEFADPTSP 60 Query: 79 PRDVMMPP--LNGAVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGV 128 V V H + + + ++ + + K DG Sbjct: 61 SLRVGRDRNDAFVQVAHEQPMLSLSNTYNYDEIAEICKRTDTLLATDDVPWVAEMKYDGS 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV-------SGPLANSTLQGEI 181 +++L+Y +G L +A++RG+G G+D T V I +VP + ++GE+ Sbjct: 121 SISLIYEEGVLARAVTRGDGTLGDDVTVNVRTIQSVPLRLHSIAGHPDYTRGRIEVRGEV 180 Query: 182 FLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTLNSLGVFV----WAWPDG- 228 L + + N R AG + + + + +A D Sbjct: 181 LLPFKEFERLNGERTAESEAPFANPRNAAAGTLKTLNSRIVAQRRLLCICYYLYALDDET 240 Query: 229 --PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA 284 P +R+K L GF + + +EW + +LP+ TDG+V++ Sbjct: 241 RLPDSYYERMKLLEEMGFDT-GVAPFKSSDLSALYHYIDEWDVQRGDLPYATDGIVLKVD 299 Query: 285 KEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 + W A+KYQP AE+ ++ + VG+SG ++ VA++ PV++ Sbjct: 300 SLTQQRVLGNTAKSPRWAFAYKYQPENARAELLSVDYQVGRSGIVTPVANVEPVLISGTV 359 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS- 399 V+R + + + D+ D + + G+ IP+I V R E PE Sbjct: 360 VRRATLHNEEFIKSLDLHYHDYVYIEKGGEIIPKITAVEPSLRRPEAEPVRLPERCPACG 419 Query: 400 ---------LTCYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + Y + C Q + R+ ++ + +G AL H E+I Sbjct: 420 APLQQIDGSVGYYCVNSYACPPQIMGRIEHYCTRRAADI-NVGPETIDALFDRHLIENID 478 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDE 506 LT L P + L ++ +PF R + +GI A A Sbjct: 479 DLYKLTASDLAQLPNFKEKSINNLLASIEQSKGRPFARLLYGIGIRFVGEGTAKTLARHF 538 Query: 507 RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 +S +L +T Q LP G A QV+ + + ++L + L + E Sbjct: 539 QSIDRLAQATAYELQALPDVGPKIAEQVVYFFSLERNQQLIAELQRCGVRLEE 591 >UniRef50_D2QGP9 DNA ligase, NAD-dependent n=2 Tax=Flexibacteraceae RepID=D2QGP9_9SPHI Length = 696 Score = 592 bits (1528), Expect = e-168, Method: Composition-based stats. Identities = 120/613 (19%), Positives = 223/613 (36%), Gaps = 83/613 (13%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 +P E+I L ++ Q++ Y++ SEV+D +D+L A LT + + S Sbjct: 1 MNPE---EQIIDLTNRLNQYNFQYYQNSISEVDDFTFDKLLADLTALENQYPEFRQPDSP 57 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMR--------ERSDLWVQPKVDGV 128 V V H + + L + + + + + K DGV Sbjct: 58 TARVGGTISKEFKTVYHRFPMLSLGNTYSEEDLIEFDKRVQKGLNGQTYEYICELKFDGV 117 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLA--------------- 173 A++L Y +G L + +RG+G++G+D T + I VP + Sbjct: 118 ALSLTYENGVLVQGATRGDGVRGDDITNNIRTIRTVPLRIGAGHKATHTQPESAPAVAAL 177 Query: 174 --NSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFV 222 ++GE FL + N R +G +QD L ++ Sbjct: 178 PALFEVRGEGFLPLAEFDRINKEREDIGEPLLANPRNAASGTFKQQDSGAVAKRRLDCYL 237 Query: 223 WAWP---DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTD 277 +++ D Q + L + GF ++ T+ R + EV NEW + +LP TD Sbjct: 238 YSFLSDTDIFQTHEESLVAMNAWGFNVSPTW-RKCTDIQEVMAYINEWETKRFDLPLGTD 296 Query: 278 GVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 G+V++ + + + W +A+KY+ +A E+ IQ+ VG++G ++ VA L P Sbjct: 297 GIVIKVNRYDQQRDLGYTAKSPRWAIAFKYKAMAASTELNGIQYQVGRTGAVTPVALLTP 356 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA-----ERTKP 390 V+L V+R ++ + + + D + V G+ IP+I V P Sbjct: 357 VLLAGTIVKRASLHNANEIERLGVMMHDTVFVEKGGEIIPKITGVDLNRRTDKSQPIVYP 416 Query: 391 TPPENRFNSLTC-------YFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 T +L Y ++ C Q +R ++ + ++ +GE L Sbjct: 417 TTCPACGTALVRKEGEAHFYCPNEQGCPPQRQARFEHFIQRRAMNIESLGEGKIELLIDR 476 Query: 443 HRFEHIFSWLLLTPEQLQNTPG--------------IAKSKSAQLWHQFNLARKQPFTRW 488 + L L + + ++ QPF Sbjct: 477 GLVQTPADLYDLKATDLLGIEKVFLVEETGKKRVVSFREKTVENILTAIERSKSQPFANV 536 Query: 489 VMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKK 545 + +GI A S ++ +T++ +P TG A V+ W + ++ Sbjct: 537 LFGLGIRYVGNTTAEKLVDYFGSMDAIMNATQEQLLAVPDTGPRIAESVVAWFGDTANQE 596 Query: 546 LGSWLAAQQITGF 558 L A + Sbjct: 597 FVERLRAAGLQFV 609 >UniRef50_Q211V0 DNA ligase n=3 Tax=Alphaproteobacteria RepID=DNLJ_RHOPB Length = 795 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 123/608 (20%), Positives = 214/608 (35%), Gaps = 96/608 (15%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 S A+A+ E+ RL +I++ ++ Y+++ ++ D YD L R+ + F S Sbjct: 14 TLSKAKAKVELKRLSLEIERHNNAYYQDDAPKISDAEYDALRHRVEAIEAKFPELVSSDS 73 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDL-----------WVQPK 124 + V P G V H V + + ++ ++ +PK Sbjct: 74 PTQKVGAAPARGFAKVQHAVPMLSLGNAFSDDEVAEFLTRVRRFLKLDAEQIPAIVAEPK 133 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--GPLANSTLQGEIF 182 +DG++++L Y GKL +A +RG+G GED T V I +P ++ P A L+GE++ Sbjct: 134 IDGLSLSLRYEHGKLVRAATRGDGFTGEDVTANVRTIKDIPHALAVAEPPAACELRGEVY 193 Query: 183 LQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ--- 230 + + + N R AG + ++D + T L F +AW + Sbjct: 194 MLKSDFLALNQRQETAGEPPFANPRNSAAGSLRQKDVAITASRPLKFFAYAWGEFSDLPE 253 Query: 231 -LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAA--K 285 L L AGFT+ T K+ D+ + +A LP+ DGVV + Sbjct: 254 ATQYGMLGWLKRAGFTVNPLIT-LCKSVDDALAFYRKIGEERATLPYDIDGVVYKVDRLD 312 Query: 286 EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 E + W +A K+ + I+ VG++G ++ VA LAPV + VQ Sbjct: 313 WQERLGFAGRAPRWAIAHKFAAEQATTILNGIEIQVGRTGALTPVARLAPVTVGGVVVQN 372 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS---- 399 + + + DI GD ++V AG IP+I VV R + P+ Sbjct: 373 ATLHNEDYIKSLDIHIGDTVVVQRAGDVIPQIVSVVRDKRPEDAEPYEFPKFCPACGSHA 432 Query: 400 ---------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 + +C Q I RL ++ + G GE L++ + Sbjct: 433 VRDEDEGEAVRRCTGGLICPAQAIERLRHFVSRGAFDIAGFGETYVELLYEEGLVRNPAD 492 Query: 451 WLLL-------------TPEQLQNT--PGIAKSK-------------SAQLWHQFNLARK 482 L E L K + L + R Sbjct: 493 IFALHSKVDELKAALFRKRESLATQREEKTGKKRKSSLSEEKRQYTDVENLLAAIDARRT 552 Query: 483 QPFTRWVMAMGIPLTRA---ALNASDERS----WSQLLFSTEQ-------FWQQLPGTGS 528 F R++ +GI + + + + G Sbjct: 553 VAFNRFIFGLGIRHVGEVTSKALVRHFADVKAFLDGVDAAALARPGPAWLDLKNVRYIGE 612 Query: 529 GRARQVIE 536 +++E Sbjct: 613 ITLERLLE 620 >UniRef50_UPI00016C45C0 NAD-dependent DNA ligase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C45C0 Length = 678 Score = 590 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 126/591 (21%), Positives = 225/591 (38%), Gaps = 56/591 (9%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 +P E + L++Q+ + Y+ E + D +D L L +R S Sbjct: 3 TAAPTPPAERAAELRKQLDHHNYLYYVEAAPVISDREFDTLLKELADIERANPGLVTPDS 62 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER---------SDLWVQPKVD 126 + V P+ G V H + D+ L + + D + K+D Sbjct: 63 PTQRVGGQPIPGFKQVTHKTPMLSIDNSYDEGDLRKFDADVRKAVGPGAAVDYVTELKID 122 Query: 127 GVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--GPLANSTLQGEIFLQ 184 GV+++L Y +G L A +RG+G G+D T + I+A+P + P A ++GE+++ Sbjct: 123 GVSMSLTYENGVLAFAATRGSGTVGDDVTHNIKTIAAIPLKLKTSNPPAIFEVRGEVYMT 182 Query: 185 REGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQL 231 R + NAR AG + +D + L F + D Sbjct: 183 RGELARINAEQAKGNQEPYKNARNLTAGTLKLKDPRECATRKLAFFAYGSGDIGGLAITT 242 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP-- 287 + L +L GF + + R + DEV EW + EL + TDG+VV+ Sbjct: 243 QAAMLAKLKEFGFPVNP-HERVCGSIDEVIAYCQEWEPKRKELAYDTDGIVVKVNDWAQR 301 Query: 288 ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP-VMLDDKKVQRV 346 E + +W A+K++ ++ + F +GK G+++ VA+ P V L V Sbjct: 302 ERIGYTAKVPKWAKAYKFEAEQATTKLGKVVFYLGKFGELTPVATFDPPVQLAGTTVTHA 361 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS----- 399 ++ + E D+ GD ++V G+ IP++ DV+ R T P+ Sbjct: 362 SMHNASWVAERDVRIGDTVVVEKKGEIIPQVVDVIKADRTGAEQVITWPDKCPKCGGPVE 421 Query: 400 --------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 + VC Q RL K + +DG+G L T + + Sbjct: 422 KEESATSYNFICANTGVCPAQLAKRLEGFAKKTRMEIDGLGREVAVQLVDTELVKSVADL 481 Query: 452 LLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERS 508 LT QL G K+ L ++ + R + + I + A L + Sbjct: 482 YRLTKAQLLALEGFKDKKAQNLLDGIAASKGRGLARLLPGLTIYMVGEAMSDLLVEEFPD 541 Query: 509 WSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 ++ + + ++ G G RA+ V + ++ ++L + L I Sbjct: 542 IDLIIAAAPEDLARVKGFGPKRAQFVRAFFDSESGRQLIADLKQFGIKMTH 592 >UniRef50_B9DWM9 DNA ligase n=12 Tax=Bacteria RepID=DNLJ_CLOK1 Length = 663 Score = 589 bits (1520), Expect = e-167, Method: Composition-based stats. Identities = 112/577 (19%), Positives = 228/577 (39%), Gaps = 50/577 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 ++ I L++ I+ +D Y+ + E+ D YD+L L + S + V Sbjct: 2 DIKKRIDELRKIIEYHNDKYYNQDDPEITDYEYDKLYVELRNLENSHPEYKIQSSPTQKV 61 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER------SDLWVQPKVDGVAVTLVY 134 V H + ++ + K + ++ + V+ K+DG+ V L Y Sbjct: 62 GGTVKRELRKVKHDIPVVSLQDVFSKEEVYSFVEKITSEVTYPKFVVEKKIDGLTVVLRY 121 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 +G+L +AI+RG+G GE + + + ++P+ + L ++GEI++ E I+ Sbjct: 122 YNGELKEAITRGDGSIGESVFENILQVKSIPKHIPSKLNYLEIRGEIYMTNENFIKVNEK 181 Query: 195 --------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAW----PDGPQLMSDRLKELAT 241 N R AG + + D S +L +F++ + S+ L+ L+ Sbjct: 182 QEEIGGKIFKNPRNLAAGTIRQLDTSIVKDRNLDIFIFNLEISEGKKFETHSETLEWLSN 241 Query: 242 AGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPES--RHWLPGQA 297 GF ++ + + + ADEV E + +L + DG VV+ + Sbjct: 242 QGFDVSPNF-KICETADEVWNAILDIEESRWDLGYSIDGAVVKVDNLNDRISLGMTSKVP 300 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 +W VA+KY P + ++ I V ++G+++ +A L PV+L + + + + + Sbjct: 301 KWTVAFKYPPEQKETVIEDIIVQVSRTGRLNPLALLRPVILANTTISKATLHNQDFIDSK 360 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAE--RTKPTPPENRFNS----------LTCYFA 405 DI GD +++ AG IP I + K P+ + + Sbjct: 361 DIRIGDTVIIQKAGDIIPEIIRSIPEKRPDWAKKYIIPDVCPVCNSKTIREPDGVDTRCS 420 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTP 463 + C+ Q ++ + +K + + G G+ AL + + I +L + L Sbjct: 421 NPDCEAQSFRKIGYFVSKDAMNIVGFGQNTVEALMKDGYIKKISDIYILKNYKDALIEKG 480 Query: 464 GIA-KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 I + L + L++ R + +GI A + A + +S +L + + Sbjct: 481 IIGKEKSVNNLLNAIELSKDNDIDRLITGLGIRNVGKQSAKILAGNFKSMDELAGAAYEQ 540 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 +L G ++E+ + +L L + Sbjct: 541 LIELEDFGPTTVPDILEFFNSNAYIELIKKLKEAGVN 577 >UniRef50_A8IGY0 DNA ligase n=56 Tax=Alphaproteobacteria RepID=DNLJ_AZOC5 Length = 739 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 119/637 (18%), Positives = 214/637 (33%), Gaps = 108/637 (16%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 S A +E + L Q+I D Y++E + D YD+L R + F S Sbjct: 17 DLSATEASDEHAALSQEIASHDARYYQEDAPVISDADYDRLRRRYEDIEARFPALKNDDS 76 Query: 78 EPRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPK 124 R V P V+H V ++ + ++ +PK Sbjct: 77 LSRKVGAAPSAKFAKVVHQVPMLSLQNAFSDEEVEEFVARVRRFLNLAESAELAFTAEPK 136 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIF 182 +DG++ +L Y G L +A +RG+G +GED T V I+ +P ++G ++GE++ Sbjct: 137 IDGLSCSLRYEGGVLVRAATRGDGTQGEDVTANVRTIAEIPHRLTGAGVPDIIDIRGEVY 196 Query: 183 LQREGHIQQQMG--------GINARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDGP---- 229 + + + N R AG + + D T L F +AW Sbjct: 197 MGKADFLALNARQEEAGKPVFANPRNAAAGSLRQLDPEITRSRPLRFFAYAWGQAEPGPP 256 Query: 230 -QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE 286 + + G T V +A + + +A L + DGVV + Sbjct: 257 GASQHEVVDAFRRFGLPTNP-LTIRVTDAAGLLAHYRKIGAERASLGYDIDGVVYKVDSL 315 Query: 287 PES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 ++ W +A K+ ++AI+ VG++G ++ VA L PV + V Sbjct: 316 ALQERLGFVSRSPRWAIAHKFAAEQATTVIEAIEIQVGRTGALTPVAKLTPVTVGGVVVS 375 Query: 345 RVNIGSVRRWQE-----------WDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----T 388 + + + DI GD ++V AG IP++ VV Sbjct: 376 NATLHNEDYIRAIGGNGEEIREGIDIRVGDTVVVQRAGDVIPQVVSVVLDKRPAGATAYQ 435 Query: 389 KPTPPENRF--------------NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEA 434 P +++ +C Q + RL ++ ++G+GE Sbjct: 436 FPHHCPVCNSQAVREVDPKTGKQDAVRRCTGGLICPAQAVERLRHFVSRNAFDIEGLGEK 495 Query: 435 GWRALHQTHRFEHIFSWLLL------TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRW 488 A ++ L + +L+N G ++ + L+ R R+ Sbjct: 496 QAHAFYEWKLIAEPADIFRLQARNEQSLSKLENREGWGRTSAQNLFAAIEARRTIALDRF 555 Query: 489 VMAMGIPLTR---AALNASDERSWSQLLFSTE---------------------------- 517 + A+GI A A S L + Sbjct: 556 IFALGIRHVGETNAKRLARHYGSVEALRDAAIGAEMPTEMEEASEETPPTRRRKPQGNEV 615 Query: 518 -QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 Q + G G+ A V+E+ +++ L + Sbjct: 616 WQEMTDIDGIGAVVAEAVVEFFREPHNRQVVEELLKE 652 >UniRef50_Q2N9V6 DNA ligase n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=DNLJ_ERYLH Length = 736 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 115/640 (17%), Positives = 216/640 (33%), Gaps = 112/640 (17%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S A A E+ RL +QI + D Y E E+ D YD L R + + F S Sbjct: 8 LSEAEAANELMRLARQIAKHDRLYHAEDAPEITDQEYDALVRRNAELEAAFPHLVREDSP 67 Query: 79 PRDVM---MPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPK 124 R V V H V + ++ ++ + K Sbjct: 68 SRKVGHAVAASPLSKVTHEVRMMSLDNAFADEEVAEFVARVRRYLNIGEDEAIAFTAEDK 127 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS--------------- 169 +DG++ +L Y +GKL +A +RG+G GED T V+ I +PQ ++ Sbjct: 128 IDGLSCSLRYENGKLVRAATRGDGQVGEDVTPNVAHIGDIPQELTPLPLAGGAGGGPLDD 187 Query: 170 -----------------GPLANSTLQGEIFLQREGHIQQQM------------------- 193 A ++GE+++ Sbjct: 188 SGSAPTPDPSRRREGKWNGPAVFEIRGEVYMATADFHALNARLMDEARAEADEKDNAFDT 247 Query: 194 ----GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD-----GPQLMSDRLKELATAG 243 N R AG + ++D S T L + W + + ++++A G Sbjct: 248 AKVRQFANPRNAAAGSLRQKDASVTATRPLRFWAHGWGAVEGDVPGETQVEVVEQIAAWG 307 Query: 244 FTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEW 299 ++ + R + +E+ +A+LP+ DGVV + + ++ W Sbjct: 308 VPVSPLFRR-CETLEEMLAHYEAIGAQRADLPYEIDGVVYKVDRLDYQQRLGFVAKAPRW 366 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +A K+ ++ I VG++GK++ V LAPV++ V V + + + + Sbjct: 367 AIARKFPAEQAETTLENIDIQVGRTGKLTPVGRLAPVLVGGVTVTNVTLHNRDEIERLGV 426 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLT-----------CYFASDV 408 PGD+++V AG IP++ + +R P+ + + Sbjct: 427 RPGDRVVVQRAGDVIPQVVRNLTPDEKRDSFEFPDTCPECGSEAVSEEGGVDVRCTGGLI 486 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIA 466 C Q RL ++ L +DG+GE E L +++ G Sbjct: 487 CPAQRTERLKHFVSRAALDIDGLGEKTIDQFFALGWLESPADIFRLKDRRDEILALEGWM 546 Query: 467 KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQL---------LFSTE 517 L R+ R ++ +GI A + + +L + + Sbjct: 547 DKSVDNLLASVEARREPDTARLLLGLGIRHVGAVTARDLMKYFHELPALRETAEKARAGD 606 Query: 518 QF----WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 + + G GS + ++ + + L ++ Sbjct: 607 EEAVVALTSIDGIGSAVVEALGDFFHEEHNRAVWDDLLSE 646 >UniRef50_C6WG81 DNA ligase n=2 Tax=Actinomycetales RepID=C6WG81_ACTMD Length = 816 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 123/593 (20%), Positives = 217/593 (36%), Gaps = 61/593 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA A++ L ++++ Y+ + DG +D L L + S + Sbjct: 43 PADARDRHRALAEEVRGHQFRYYVLDAPTISDGEFDALLRELQSLEDAHPGLATPDSPTQ 102 Query: 81 DVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRER-------SDLWVQPKVDGVAVT 131 V AV H + D++ L W + + KVDG+A+ Sbjct: 103 QVGGTFSTEFTAVDHLERMLSLDNAFDEDGLRAWFERVGKEVGDAARYLCELKVDGLAIN 162 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIFLQRE 186 L Y G+L +A++RG+G GED T + + VP+ ++G ++GE++ E Sbjct: 163 LRYERGRLVRALTRGDGRTGEDVTLNLRTLRDVPEVLTGTDEWPVPELVEVRGEVYFAVE 222 Query: 187 GHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMS 233 ++ N R AG + ++D T L + + S Sbjct: 223 DFLELNAKLVEAGLPPFANPRNTAAGSLRQKDPKVTASRRLRMVCHGIGKRAGFELERQS 282 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES-- 289 D L G ++ +T V DEV W + + DG+VV+ + P Sbjct: 283 DAYAALRAWGLPTSE-HTAVVATFDEVWARVAHWGEHRHDAAHEIDGLVVKVDEVPLQRR 341 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A+KY P + I VG++G+++ A + PV + V R + Sbjct: 342 LGSTSRAPRWAIAFKYPPEEATTTLLDIGVQVGRTGRVTPFAIMEPVKVAGSTVARATLH 401 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS-------- 399 + + + GD+I++ AG IP + V R A+ + P + Sbjct: 402 NASEVKRKGVLIGDRIVIRKAGDVIPEVLGPVVDVRPADAREFVMPASCPECGHALRPMK 461 Query: 400 ---LTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 + + + C Q RL +L ++ L ++ +G G AL + + + LT Sbjct: 462 EGDVDIRCPNAEGCPAQLRERLAYLASRSALDVEVLGYEGAAALASSEVYGNEADLFDLT 521 Query: 456 PEQLQNT------PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDE 506 E L G + A+L A+ QP R ++A+ I A A + Sbjct: 522 AEDLLRVDLFRNQDGALVTNGAKLLENLEAAKSQPLWRVLVALSIRHVGPTAARALAVEF 581 Query: 507 RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 +L + E G G A V EW +++ AA + + Sbjct: 582 GGVQAILDAEEADLAAAGGVGPTIAAAVREWALTPWRQEVVRRWAAAGVRMVD 634 >UniRef50_B5ZAV3 DNA ligase n=15 Tax=Ureaplasma RepID=DNLJ_UREU1 Length = 673 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 114/584 (19%), Positives = 236/584 (40%), Gaps = 55/584 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 R + +I+ L+Q++ QW+ +Y+ V D VYDQ L + + + S Sbjct: 2 DRIKAKINELKQKLDQWNYEYYVLDDPSVPDHVYDQAMRELIELENAYPQFKTNNSPSVR 61 Query: 82 VMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD-------LWVQPKVDGVAVTL 132 V V H + D N L + ++ + V+PK+DG+++++ Sbjct: 62 VGGFVSEKFNKVKHKRPMLSLSNAFDANDLRKFDQDNQNASVDLKGYVVEPKIDGLSISI 121 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN--STLQGEIFLQREGHIQ 190 +Y++ KL++AI+RG+G+ GED T + I +P + + ++GE+++ + Sbjct: 122 IYKNAKLHQAITRGDGVNGEDVTSNILTIKDIPHYIDQKYKDYEIEVRGEVYMAFHDFYE 181 Query: 191 QQ-------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLKE 238 N R AG + D+S L F++ + G + + ++ Sbjct: 182 MNDNLEESDKKFANPRNAAAGTLRSLDNSIVAERKLSAFMYYLVNAQELGIKTHYESIQF 241 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRHWLP 294 L F ++ + V DEV + + + +L ++ DG+V++ + + Sbjct: 242 LKDNKFKVSDLIVK-VDTIDEVINQIDRYTKVRNDLSYMIDGIVIKINNLEVYDEIGYTS 300 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 +W +A+K+ +++ I VG++GKIS VA + P++LD V+ + + Sbjct: 301 KFPKWAIAYKFPANVVSSQLLEIINDVGRTGKISYVAKIKPILLDGSIVEYATLHNFDFI 360 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC------------ 402 +E DI D+I + AG IP +D V P E+ N +C Sbjct: 361 KEKDIRINDEIKIYKAGDVIPYVDGVDLSKRLAN-SVPYESITNCPSCQSVLVRENDEVD 419 Query: 403 -YFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ-- 458 + C++ I ++V+ ++ + ++G+ +A + + +++ L + Sbjct: 420 QRCLNIYGCKKINIEKIVYFVSRNCMNIEGMSDAIINKFYDANLIKNVADLYYLQKHKEF 479 Query: 459 -LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLF 514 L + I + L + N ++ + + A GI A A ++ + L+ Sbjct: 480 ILASDFKIKDKSFSNLINSINNSKTRSLEFLLTAFGIRHVGPNLAKKLAKQFKTMTTLMH 539 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 + + G A +I W + L + L + Sbjct: 540 ANFGELTNVDACGEKAALSLINWFNDDHNVSLVNQLQQVGVNME 583 >UniRef50_P47496 DNA ligase n=3 Tax=Mycoplasma RepID=DNLJ_MYCGE Length = 659 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 110/574 (19%), Positives = 228/574 (39%), Gaps = 48/574 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 + +I +L IK +D Y+ + ++D YD L L Q ++ S + V Sbjct: 3 DVKLKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQRV 62 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVAVTLV 133 + G + H + ++ ++ +++ V+PK+DGV+++L Sbjct: 63 GGEAVKGFKKLNHNSPMLSLENAFSTKEIANFIDNINFQTNSKNEFVVEPKIDGVSISLT 122 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI---- 189 Y++G L A++RG+G GED V I ++P T+ ++GEIF+ ++ + Sbjct: 123 YKNGVLVHALTRGDGSVGEDVLNNVKTIKSIPLTIPFT-KTIEIRGEIFVDKKTFLAINN 181 Query: 190 QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ----LMSDRLKELATAGF 244 Q + NAR AG + + T L + P+G + + L++L F Sbjct: 182 QLEKPFANARNLAAGTIRNLNSEITAQRKLRALFYYIPNGLEESITTQTMVLEQLKQWKF 241 Query: 245 TLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE--PESRHWLPGQAEWL 300 ++ T R +N ++ + + +L F DG+V++ + W Sbjct: 242 PVSDT-IRVFQNKFQLINYLEAFDKKREQLTFNLDGLVIKLNSLLFYQQLGATSKSPRWA 300 Query: 301 VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA 360 +A+K+ P ++ A+ +G++G+++ A L V LD KV + + + DI Sbjct: 301 IAFKFSPKFVQTKLTAVLITIGRTGRVNYTAKLESVNLDGTKVTAATLHNFDYIKTKDIR 360 Query: 361 PGDQILVSLAGQGIPRIDDVVWRGAERTKPT------PPENRF------NSLTCYFASDV 408 D +++ AG+ IP++ V + P + + Y ++ Sbjct: 361 INDTVVIYKAGEIIPKVLKVNLEKRKNDTIIIQEQKYCPSCNSKLVKIVDEVDQYCTNET 420 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTP-GI 465 C+E+ I + + +K + ++G+ L++ + I L Q+ I Sbjct: 421 CKERNIQLINYFVSKTAMDINGLNINTITKLYEHNLVRSIVDLYDLKDKKNQVLKLDLKI 480 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQ 522 +L ++++ R + +GI A A+ ++ L ++ + Sbjct: 481 GDKLFNKLVDNIENSKQKGMARLLTGLGIKHVGNVLAKNLANHFKNIKALQHASLENLIS 540 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 L G A + W + +L L +Q+ Sbjct: 541 LNDVGITVAESLYNWFHDPNHLQLIEQLELRQVK 574 >UniRef50_A7H8A2 DNA ligase n=7 Tax=Proteobacteria RepID=DNLJ_ANADF Length = 699 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 121/613 (19%), Positives = 214/613 (34%), Gaps = 80/613 (13%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 A+ + L+ +I D Y+ + + D YD+L L + + S Sbjct: 4 DADRDSAETRAAELRARILDADHAYYVLDRPVLADAEYDRLVRELAEIEAAHPELATSDS 63 Query: 78 EPRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSD-----------LWVQPK 124 + V P V+H + + L + +PK Sbjct: 64 PTQRVSGAPSERFERVVHREPMLSLGNIQSDGELDEFDARVHRLLGLAGDVQVGYVAEPK 123 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLI------SAVPQTVSGP-LANSTL 177 +DG+AV LVY G+L + +RG+G+ GED T + + VP+ ++G + Sbjct: 124 LDGLAVELVYEGGRLVQGSTRGDGVNGEDVTANLRTVGRTRANRGVPERLAGEVPPRVEV 183 Query: 178 QGEIFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTLNS-LGVFVW----- 223 +GE+ L +E N R AG + + D T L + Sbjct: 184 RGEVLLFKEHFEAMNRQILRAGDEPFANPRNAAAGSLRQLDWRVTARRPLSFIAYEALVP 243 Query: 224 --------AWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELP 273 A P + +++L+ LA GF R + V R+ + LP Sbjct: 244 GAEPGGARAGPWAWRTHAEKLEALARWGFETNAENER-CEGIAAVKAYRDRMAERRFALP 302 Query: 274 FVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVA 331 + TDGVVV+ W VA+KY P + ++ I +VG++G ++ V Sbjct: 303 YDTDGVVVKVDDLDWRRRLGAASKFPRWAVAFKYPPQEEATRIRRIWASVGRTGILTPVV 362 Query: 332 SLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA--ERTK 389 PV L V R + + + D+ GD ILV AG+ IP + + E Sbjct: 363 DFEPVRLSGAMVSRATLHNEDEMRRKDVLEGDWILVRRAGEVIPEVVMPLKERRTGEERP 422 Query: 390 PTPPENRFNSL----------TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRAL 439 P C Q + RL ++ + +DG+G+ L Sbjct: 423 FAFPAECPICGAKVVREEGEKVYRCTGAACPAQLVGRLTHFAQRRAMDIDGLGDKLALGL 482 Query: 440 HQTHRFEHIFSWLLLTP---EQLQNTPGIAK---------SKSAQLWHQFNLARKQPFTR 487 + + + ++L + P + + + ++ R Sbjct: 483 VERGLVKDFADLYAVPFPAWQELFSRPRKEERDAKAELPQKSAQNMVDALERSKATTLRR 542 Query: 488 WVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIK 544 + A+GIP AA A ++ + ++E + G AR++ W E Q + Sbjct: 543 LLFALGIPQVGEATAATLARHFGELARFMDASEDALLAVRDVGPETAREIRAWTEEPQNR 602 Query: 545 KLGSWLAAQQITG 557 ++ L A + Sbjct: 603 RVVERLLAAGVRP 615 >UniRef50_Q2NJF5 DNA ligase n=6 Tax=Candidatus Phytoplasma RepID=DNLJ_AYWBP Length = 671 Score = 580 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 114/577 (19%), Positives = 222/577 (38%), Gaps = 49/577 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 +++I L +Q+ + + Y+ ++ D YD L L + + S Sbjct: 5 DPIKQKIKSLVKQLNKANYQYYNLSDPDLSDQQYDALIKELINLENHYPQFKLPYSPTLK 64 Query: 82 VMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGVAVTLV 133 + + H + + + L + L + K+DGVA++L Sbjct: 65 IGGFVEKKFSTIKHKTPMMSLANVFNIEELKAFYDRIVKKIPTFSLLTELKIDGVAISLK 124 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM 193 Y+ G L +A++RGNG+ GED T+ I +P ++ L + ++GEI+L + Sbjct: 125 YQKGILVRALTRGNGIWGEDVTKNAQTIKTIPLRLNEDL-DLEVRGEIYLSHPDFEKLNA 183 Query: 194 G--------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG---PQLMSDRLKELAT 241 N R +G + + + + L +FV+ D + L L Sbjct: 184 QRKQENKPLFSNPRNAASGTLRQLNSAVVAKRNLSIFVYGIADPYLTKPTQKETLVFLTA 243 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKE--PESRHWLPGQA 297 GF + V N + + V ++ K +L + TDG+V++ + Sbjct: 244 LGFATNPHHY-FVSNFENLLSVIEKYKSIKEQLTYDTDGIVIKINELVFHSLIGATAKAP 302 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 W A+K+ + + ++ I F VG++G I+ V + PVM+D V +V + + + Sbjct: 303 RWATAYKFATITSQSIIQNIIFQVGRTGVITPVCEIMPVMVDGSLVSKVFLHNYDYICKK 362 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAE---------RTKPTPP---ENRFNSLTCYFA 405 DI D ++V AG IP I +V+ P+ E + + + Sbjct: 363 DIRIKDHVIVHKAGSVIPEILEVIKSKRTDLQKPTLMIEKCPSCKTILEKQPGGIDYFCL 422 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ--LQNTP 463 + C+EQ I +L+ +K + ++ +GE + LL Q LQ Sbjct: 423 NPNCREQKIQKLIHFVSKNAMDINVLGEQTIITFFDKNLITKPSDLYLLKNHQHILQEIS 482 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFSTEQFW 520 G K + ++++ F + A+GI + A ++ L ST Sbjct: 483 GFGAKKITNILDAIEASKQKGFEDVLFALGIKHIGKKVSQVLAKYFQTIENLQQSTSDTI 542 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 Q+ G A+ + ++ N+ + + L ++ Sbjct: 543 TQIREIGIKIAQSIQQYFSNSCNLEEVTKLKKLGVSF 579 >UniRef50_C1ZM17 DNA ligase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZM17_PLALI Length = 707 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 124/599 (20%), Positives = 217/599 (36%), Gaps = 68/599 (11%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 S +A+ + +L+Q+I++ D Y+ ++E+ D YD+L ARL + + F S Sbjct: 18 SADQARHLLDKLRQEIRRHDRLYYVLAQNEISDLEYDRLMARLLEVEAAFPELTTADSPS 77 Query: 80 RDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLW------------MRERSDLWVQPKV 125 + V P+ G V H V + + D++ L + + + + KV Sbjct: 78 QKVGGEPIEGFVQVAHSVPMLSIDNVYDESGLLEFGQKVSRRASEVGWKGPMEWLAEFKV 137 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP------------LA 173 DGVA++L+Y +GKL +A++RG+G G+D T I VP + Sbjct: 138 DGVALSLIYEEGKLIRAVTRGDGRVGDDVTHNAKTIKGVPLFLEDGSSKKSLFAESNIPR 197 Query: 174 NSTLQGEIFLQREGH--------IQQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWA 224 ++GE ++ + + + N+R AG + D L F + Sbjct: 198 LLEVRGEAYIGNQDFAKVRAHQLERGEEPFKNSRNATAGSLKLLDPKLCAQRQLRFFAHS 257 Query: 225 WPD-------GPQLMSDRLKELATAGFTLTQ-TYTRAVKNADEVARVRNEWWKAELPFVT 276 + +D L+ G T A A + L F Sbjct: 258 LGAIDEQEATRFKTHADYLELFYQVGLPTVPMTACHPSFEAAVAASPTMMEALSTLDFEV 317 Query: 277 DGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DG+V + W+VA+K++ +V I VGK+G ++ VA L Sbjct: 318 DGLVFKVNNLALRAELGMTSKSPRWIVAYKWERYEAATKVLNITVQVGKTGVLTPVADLE 377 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTP 392 PV + V R ++ + + + GD ++V AG+ IP I V R Sbjct: 378 PVEIAGTTVSRSSLHNRDEIERLGLGVGDTVIVEKAGKIIPHIVRVEEHLRPTNTAPYRF 437 Query: 393 PENRFNS----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 PE + + C +F L + ++Q + ++G+G L + Sbjct: 438 PETCPECSTIVEQDEGGVYIRCPNINCPARFRESLRYFASRQAMDIEGLGTKLVEQLVSS 497 Query: 443 HRFEHIFSWLLL--TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR-- 498 + I L +L + + L +R+QP R + A+ I Sbjct: 498 RLVQSISDLYRLVDKRAELLELERLGEKSVDSLLAGLEASRQQPLWRLLTALNIRHVGQR 557 Query: 499 -AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 A + A S +L T + P G A+ V + KL L + Sbjct: 558 TAQILAERFGSMDRLSAQTIEELSATPEVGEVIAQSVHHFFHTEYGSKLIEELKNLGLN 616 >UniRef50_B0B9Q4 DNA ligase n=14 Tax=Chlamydiaceae RepID=DNLJ_CHLT2 Length = 663 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 112/570 (19%), Positives = 207/570 (36%), Gaps = 45/570 (7%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 +++ L ++ + D Y+ + + D YD L + + S + Sbjct: 6 RDDYIALCTELVEHDRRYYALNQPTISDYSYDMKMRELQEIEVQHPEWKVSWSPTMYLGD 65 Query: 85 PPLNGA--VMHPVAHTGVRKMVDKNALSLWMRER-------SDLWVQPKVDGVAVTLVYR 135 P V H + + L + ++ K+DG+AV + Y Sbjct: 66 RPSGQFPVVPHSSPMLSIANVYSLQELEEFFSRTEKLLGYSPGYSLELKIDGIAVAIRYE 125 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-GPLANSTLQGEIFLQREGHIQQQM- 193 +A+SRGNG+KGED T VS I ++P + + ++GE+FL E + Sbjct: 126 KRLFAQALSRGNGVKGEDITANVSTIRSLPMRLPQEAPEDLEVRGEVFLSYEAFEELNAC 185 Query: 194 -------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQ--LMSDRLKELATAG 243 N R G + + L + V+ + + L+ + G Sbjct: 186 QREQGKLEFANPRNAAGGTLKLLSSKEAAKRKLDLSVYGLITDQKKRSHFENLQLCSQWG 245 Query: 244 FTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKE--PESRHWLPGQAEW 299 F + + ++ EV E +A LP DGVV++ + W Sbjct: 246 FFVAG-MPKQCRSRQEVVERIREIEEMRAALPMAIDGVVIKVDNIAHQDRLGLTSKHYRW 304 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +A+KY P ++ I VGK+G ++ VA LAPV L +V R ++ + ++ DI Sbjct: 305 AIAYKYAPERAETILEDIVVQVGKTGILTPVAELAPVFLSGSRVSRASLYNQDEIEKKDI 364 Query: 360 APGDQILVSLAGQGIPRIDDV--VWRGAERTKPTPPENRFNS--------LTCYFASDVC 409 GD + V G+ IP+I + R E P ++ + +C Sbjct: 365 RIGDSVYVEKGGEVIPKIVGINLAKRSLESEPWKMPSLCPVCHEPVVKEKVSVRCINPLC 424 Query: 410 QEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSK 469 + ++ + +K L +D +GE L + LT E L+ PG Sbjct: 425 SGGMLEKICFFASKSALNIDHLGEKVVTKLFEVGLISSCSDIFALTEEDLKQVPGFKDRS 484 Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIPLT---RAALNASDERSWSQLLFSTEQFWQQLPGT 526 L A+K R + A+ IP A A + +++ ++ + G Sbjct: 485 IQNLLASIAGAKKVALDRLLTALSIPFVGSSGAIALADHFGTLDKVIEASLDELMSIEGI 544 Query: 527 GSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 G A ++ + + ++ + + Sbjct: 545 GPKVAASIVAFFSKHENREEIRRMQELGVQ 574 >UniRef50_C3IV00 DNA ligase n=1 Tax=Bacillus thuringiensis IBL 4222 RepID=C3IV00_BACTU Length = 656 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 92/574 (16%), Positives = 206/574 (35%), Gaps = 46/574 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 + L ++ + Y+ K D YD+L L + + S V Sbjct: 3 DLRARYLHLVGELTMLNHHYYTMDKPIASDAEYDRLYDELVKIEELHPEWTVAHSPSNRV 62 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR------ERSDLWVQPKVDGVAVTLVY 134 L+ H + + K + + ++ + ++ K+DG+A L Y Sbjct: 63 GGEVLDKFEKKEHTMPLYSLEKSQTYDGVRKFVEDVKREFPNATFTIEQKMDGLANVLRY 122 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM- 193 G ++ +RG G GE ++++ I ++P + +GE+F+ G Sbjct: 123 SGGSFSEGRTRGTGKIGEIVSEQIKTIRSIPLNIRF-QGVIEPRGEVFMPISGFEAYNAS 181 Query: 194 ------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAW----PDGPQLMSDRLKELATA 242 N R AG + D L F + + ++ + L Sbjct: 182 LPEGEAPLKNPRNGAAGALRNLDPRIAASRPLDAFWYDIAYSEGITFETQAEMMTFLQEQ 241 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKE--PESRHWLPGQAE 298 GF + + + D + E + L + DG+V++ + E + + Sbjct: 242 GFKINPYFY-VTDSIDVIIEKLEEMKEVRPTLNWDIDGMVIKVNELHIREELGYTSKFPK 300 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W +A+K++ V + + ++ + VG++GK++ +A L PV + V + + + Sbjct: 301 WAIAYKFEAVEETTTLNSVTWEVGRTGKLTPLAHLEPVDIGGTTVTKATLNNYDDILRKG 360 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS--------LTCYFAS-DVC 409 + G ++ V + IP I +V G+E T+ PP + + D C Sbjct: 361 VKVGAEVFVRRSNDVIPEIMGIV-EGSEGTEIVPPTHCPECETVLVQDGAHLRCMNIDSC 419 Query: 410 QEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEH-IFSWLLLTPEQLQNTPGIAKS 468 Q + + +++ + +D E L + + L +L + Sbjct: 420 SAQSVGKFTHFASREAMNIDSFSEKTAEQLFEAGLIRNSFVDLYRLDRNELLKLDRFGER 479 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPG 525 K+ +L ++ + ++ A+G+ + A + + ++ + ++ Sbjct: 480 KADRLLAAIEESKSRTLEAFIYALGMRHSGKGTAERLLRYYNNIDDIANASVEDLMRIED 539 Query: 526 TGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 GS A+ + ++ N + ++ L A +T Sbjct: 540 IGSAVAQSIFDYFHNERNLQMIEELKALGLTLTH 573 >UniRef50_Q6MAB5 DNA ligase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=DNLJ_PARUW Length = 665 Score = 577 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 110/578 (19%), Positives = 217/578 (37%), Gaps = 52/578 (8%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 Q++ +L +I + Y+ E + + D +D L +L + +R S + V Sbjct: 4 QKDYEKLCHEIWHHNKLYYIEHQPIISDEEFDALLKKLEEIERSHPEWITEFSPSQRVNE 63 Query: 85 PPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGVAVTLVY 134 +G V H + K + +++ + + V+ K+DG+A+T +Y Sbjct: 64 SLTSGFKTVAHRTPMLSLANTYSKEEIEDFIKRLQKLVGKRQVEFSVELKMDGIAITAIY 123 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQ 192 G + I+RGNG +G+D T + +I +P +SG ++GE+F+ R+ +Q Sbjct: 124 EQGIFKRGITRGNGKRGDDITTNMRMIENLPLQLSGENLPDFLEIRGEVFMPRQVFLQLN 183 Query: 193 MGG--------INARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLKEL 239 N R AG + D L V + + + ++ Sbjct: 184 EQKLQDGEVLWANPRNAAAGSLKLLDPKMVAERRLAVVFYGLAEDSSASIKKQAEVPSFF 243 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWLPG 295 + G + + +N +++ + E + LP+ DG+V++ + Sbjct: 244 RSIGLPALEHHA-YCQNIEQIWKFAEEIRSLRTILPYDIDGIVIKLNDFKDQKRLGVTGK 302 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A+K+ + I +G++G ++ VA L P+ L + R ++ + Q Sbjct: 303 SPRWAIAYKFAAEQAKTRIIDITVQIGRTGVLTPVAELEPIFLSGSTIARASLYNQEEVQ 362 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAE--RTKPTPPENRFNS----------LTCY 403 DI GD + + G IP++ +V P + + Sbjct: 363 RKDIRIGDLVTIEKGGDVIPKVLNVELSQRPLHSQPWQMPLYCPSCGTQVINIIGEVAVR 422 Query: 404 FAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNT 462 + D C EQ I +L++ KQ + + +GE L Q LT Q+ Sbjct: 423 CPNEDSCTEQQIRKLIYFVGKQAMDIKHMGEKIVIQLFQKGFIHLPSDIFALTEGQISQL 482 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 L ++ R++MA+ I A L A+ + L+ E+ Sbjct: 483 TNFKTKAIQNLMRSIEESKHVSLERFIMALEIKYIGIGTAELLAARAGTIETLMQLNEED 542 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 ++ G G A+ V+E +N + ++ L + Sbjct: 543 LIKIEGVGGKVAQAVVEHFQNPKHRQEVYRLLELGVCP 580 >UniRef50_C0A405 DNA ligase n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A405_9BACT Length = 761 Score = 576 bits (1485), Expect = e-163, Method: Composition-based stats. Identities = 128/657 (19%), Positives = 227/657 (34%), Gaps = 127/657 (19%) Query: 25 WSPARA--QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------ 76 +PA + I+ L+ ++ + D+ Y++ + E+ D YD+L L + Sbjct: 1 MTPAEPTPVQRIANLRAELARHDELYYRAARPEISDYDYDRLKRELANLESQHPQLDLGD 60 Query: 77 SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLW---------------------- 112 S + + G V H A + D+ L + Sbjct: 61 SPTLRIGDDRVEGFTRVRHRQAMLTLDNTYDEGELREFHVRVVKALSKENPPPPPPPPPS 120 Query: 113 ------------------------------MRERSDLWVQPKVDGVAVTLVYRDGKLNKA 142 V+PK+DGV+++L Y GKL +A Sbjct: 121 PTTTATKPTEQLDLFAPVPSPPPPPLPPATFDANIAYIVEPKIDGVSISLTYEHGKLTQA 180 Query: 143 ISRGNGLKGEDWTQKVSLISAVPQTVSGPLA-------NSTLQGEIFLQREGHIQQQ--- 192 I+RG+G +G+D T V I +P T+ ++GEIFL+ E + Sbjct: 181 ITRGDGTEGDDVTANVKTIHGLPHTLCHAPGTTTPLPALIEIRGEIFLREEEFRRINQQQ 240 Query: 193 -----MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD-----------------GP 229 N R AG + + D + L + ++ G Sbjct: 241 EEAGDAPYANPRNLAAGTLKQLDPTLVASRRLEIVLYGLGACEPAVPPPPPSAPTDALGF 300 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP 287 + ++L G + +V+ D V E + + TDG VV+ Sbjct: 301 DSQTTYQRQLIAWGLPTVEK-IWSVRGIDAVWTAIQELDRLRRTFAYATDGAVVKLDLFA 359 Query: 288 ES--RHW-----LPGQ-------AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASL 333 + + W A+K+ P ++AI VG++G ++ VA L Sbjct: 360 QQKILGYRGADATGRAQEARKLSPRWACAFKFPPDRAKTRLRAITIQVGRTGVLTPVAEL 419 Query: 334 APVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPT 391 PV+L V+R + + D+ D +L+ AG+ IP + +V+ R + Sbjct: 420 DPVLLAGSTVRRATLHNADEIARKDVRINDTVLIEKAGEIIPAVINVIVEKRPPDSIPYA 479 Query: 392 PPENRFNS----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 P+N + + C + R+ +K L ++G+G L Sbjct: 480 FPQNCPACNTPAVRIEGEVAWRCLNPHCPGKMRRRIAHFVSKACLDIEGLGREIVELLLD 539 Query: 442 THRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR--- 498 + + I LT EQL ++ S L + R R + +GIP Sbjct: 540 HNLIKTIPDLFRLTREQLLPLKKSGETWSGNLINAIAARRTADLWRVIHGLGIPQVGAAA 599 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 A A RS L +T ++LP G+ A+ V +W + ++L + L + Sbjct: 600 AKNLARAFRSLDALAAATLPDLERLPDFGATTAQAVRDWFADPHNQELIADLQRAGL 656 >UniRef50_A6GU16 DNA ligase n=1 Tax=Limnobacter sp. MED105 RepID=A6GU16_9BURK Length = 597 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 111/550 (20%), Positives = 214/550 (38%), Gaps = 57/550 (10%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPL 87 + RL + +W+ Y+ EV D YD++ L Q + S + V P Sbjct: 27 MRRLIDLLNRWEYAYYVLDAPEVPDSEYDKVYRSLQQIENNHPELIQNDSPTQRVGGKPA 86 Query: 88 NG--AVMHPVAHTGVRKMVDKNALSLWMRERSD-----------LWVQPKVDGVAVTLVY 134 +G V H V + + + + + R + V PK DG+A+++ Y Sbjct: 87 DGFEQVRHRVPMLSLGNAFEDSDVLAFDRRVKELADLPIDTTIAYAVDPKFDGLAISIHY 146 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQ 192 +G ++AI+RG+G GED + V I ++P + G A+ ++GEIF+ ++ +Q Sbjct: 147 TNGMFDQAITRGDGTVGEDVSANVKTIRSLPLKLKGSVVPAHLEIRGEIFMTKKDFLQMN 206 Query: 193 MG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP------DGPQLMSDRLK 237 N R AG + + D L + + + S +K Sbjct: 207 QRQAELGLKVFANPRNAAAGTIRQLDPKVAASRPLRFYCYGAALEREQLRELKSQSAMMK 266 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHWL 293 LA G +++ ++ A+ + ++ LPF DGVV + + ++ Sbjct: 267 WLAALGLPVSE-LSQTATGAEGLLSFYRSVGGRRSTLPFEIDGVVYKVDSFDLQDQLGYV 325 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 + VA K+ P ++ + I+ VG++G I+ VA L PV + V + ++ Sbjct: 326 AKAPRFAVAHKFPPDEVLSRLLNIEVQVGRTGSITPVAKLEPVKVGGVVVSSATLHNLDE 385 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDV--VWRGAERTKPTPPENRFNSLT---------- 401 Q D+ GDQ+LV AG IP + R + P + + Sbjct: 386 IQRKDLRVGDQVLVRRAGDVIPEVLPFPGNQRSPVSSAFVMPTHCPICNSLVRKEEGEAA 445 Query: 402 -CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQ 460 VC+ Q ++ ++ + ++G+G L + L + L Sbjct: 446 FRCTGGLVCKAQLTQSIIHFAHRRAIDIEGLGSKLVEVLVDKEWVKTPADLFRLEFDALV 505 Query: 461 NTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTE 517 + + L + A++ F R++ +GI A A+ ++ +L+ ++E Sbjct: 506 QLERMGDKSARNLLDSIDKAKQTTFGRFLFGLGIRHVGEATARDLAAYFKNVERLMNASE 565 Query: 518 QFWQQLPGTG 527 + ++ G Sbjct: 566 EELLEVTMLG 575 >UniRef50_Q5GS88 DNA ligase n=9 Tax=Wolbachia RepID=DNLJ_WOLTR Length = 683 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 120/585 (20%), Positives = 216/585 (36%), Gaps = 63/585 (10%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG--SEPRD-VMM 84 + EE ++L+ QI D Y ++ K E+ D YD+L +L + + +D V Sbjct: 5 EKMIEEFTKLRDQISYHDVLYHQKSKPEIADAEYDKLKQKLVEMEGQLPGACVTQDGVGA 64 Query: 85 PPLN--GAVMHPVAHTGVRKMVDKNALSLW--------MRERSDLWVQPKVDGVAVTLVY 134 P + H + D+ + + + E +++ +PK+DG++ + VY Sbjct: 65 APDEKFSKIKHREPMLSLENAYDEQGVERFLSRIKRFLIEEEIEVFCEPKIDGLSFSAVY 124 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM- 193 DG+ KA +RG+G GED T+ V+ I P+ + ++GEI++ ++ Sbjct: 125 EDGRFVKAATRGDGFIGEDVTRNVATIKGFPRFLQDVQDRLEVRGEIYINNSDFLKLNKD 184 Query: 194 -GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ-LMSDRLKELATAGFTLTQTY 250 N R AG + + D S T L F ++ G + S+ L L + GF + + + Sbjct: 185 NEFANPRNAAAGSLKQLDVSITANRPLKYFAYSLIGGKEKSQSEVLNRLESLGFCVNE-H 243 Query: 251 TRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQ 306 N + N+ + + L + DG+V + +A+K+ Sbjct: 244 RSLTNNLSGMLEFYNKVYNCRYSLDYDIDGIVYKVNDLILQSRLGSTHKAPRSALAYKFS 303 Query: 307 PVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQIL 366 V ++ I VG++G ++ VA L PV + V R N+ + + D+ GD + Sbjct: 304 AVYAKTKLNKIFIQVGRTGVLTPVADLIPVNIGGVLVSRANLHNQDEIKRKDVREGDIVT 363 Query: 367 VSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS---------LTCYFASDVCQEQFIS 415 + AG IP+I V R A+ PE C+ Q I Sbjct: 364 IKRAGDVIPQIVRVDKGSRHADAPGFVFPEICPECGGKVQAEGAAIRCSEELTCKAQIIG 423 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE----QLQNTPGIAKSKSA 471 +L +K + G+GE + + + I L L+ P + A Sbjct: 424 KLSHFVSKGAFDIFGLGEKQIKFFYDLGLIKQIPDIFNLEERLNEFSLKEQPDWGERSIA 483 Query: 472 QLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE----------- 517 L + R R++ ++GI A L A+ S++ S Sbjct: 484 NLLNAIQNRRVITLDRFIFSLGIRFIGQVAAELLANYYVSYNNWYNSMIKLLSNDAEVGV 543 Query: 518 ------------QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWL 550 + G G A + + K+ L Sbjct: 544 GGVEKKIAKSFSDELVGIDGIGEKVAESLKSFFSKEHNIKMLKDL 588 >UniRef50_Q7UKD1 DNA ligase n=1 Tax=Rhodopirellula baltica RepID=DNLJ_RHOBA Length = 706 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 118/606 (19%), Positives = 217/606 (35%), Gaps = 74/606 (12%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 + +L +I + + Y+ + E+ D YDQL A LTQ + S + Sbjct: 10 DSIASRVQQLVDEINRHNRLYYDDAAPEITDLQYDQLLAELTQLENDHPDLRRPDSPTQL 69 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVT 131 V ++ V H V + + L+ M ++ K+DGVA + Sbjct: 70 VGGDVVDQLVQVPHRVPMLSIDNTYSREELAAAMERIEKSLEGESVAWTMEYKIDGVAGS 129 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP------------LANSTLQG 179 + Y +G+L A++RGNG G+D T V I +P++++ ++G Sbjct: 130 IRYENGELTLALTRGNGQVGDDITHNVRTIRELPRSIADAALAHPEVAGGNVPEVLEVRG 189 Query: 180 EIFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWA----WP 226 E+++ N R AG + D ++ F Sbjct: 190 ELYMTDADLADLNVRQTDAGHEPFKNTRNVTAGTIRLLDPKIAASRNIRFFCHGSGELVG 249 Query: 227 DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAK 285 L+ + G + R D + + E +LPF DG+V + Sbjct: 250 VRASDHMTFLQHVQALGIPIAPDVVRFENKEDALQAIAKLELEMPDLPFEIDGIVFKVDS 309 Query: 286 EPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 + W++A+K++ + ++AI VGK+G I+ VA L PV + D V Sbjct: 310 FEQREKLGVRSKSPRWVIAYKFERYEAITTLEAIDVQVGKTGTITPVAYLTPVDIADTTV 369 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS-- 399 R ++ + + D+ GD ++V AG+ IP++ V R K P + Sbjct: 370 SRASLHNADEIERLDVRVGDTVVVEKAGKIIPKVVRVEKHARTKPLPKFEFPTHCPQCDE 429 Query: 400 --------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 + + C Q RLV+ G++ + +DG+GE L Q E+ Sbjct: 430 VLTRDEGGVYIRCTNPACPAQLRQRLVYFGSRTGMDIDGLGEEVVDLLLQKELVENYADL 489 Query: 452 LLLTPEQLQNTP---------------GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 L ++L + + L N +R + R + ++ I Sbjct: 490 YRLNVDELAELTWPRLRKGKGDEMIEVQFGRKNAESLVAGINESRTRGLARVLSSISIRH 549 Query: 497 TR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 A L + + L + + + G A ++++ + + S L A Sbjct: 550 IGPRVAKLITAKFWNLDLLRSAKAEDLAAIHEIGDRIAESLVKFIHSESGSQTLSDLDAV 609 Query: 554 QITGFE 559 +T E Sbjct: 610 GVTMSE 615 >UniRef50_Q8EWL9 DNA ligase n=1 Tax=Mycoplasma penetrans RepID=DNLJ_MYCPE Length = 701 Score = 572 bits (1476), Expect = e-162, Method: Composition-based stats. Identities = 105/598 (17%), Positives = 229/598 (38%), Gaps = 68/598 (11%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEP 79 + I L++ + Q++ +Y+ V D YD L Q + + S Sbjct: 18 NNKEILNRIQNLRKNLNQYNYEYYGLENPSVSDYEYDMCLKELIQLETQYPEFDSPNSPS 77 Query: 80 RDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVA 129 + V V H + + D+ L + + V+PK+DG++ Sbjct: 78 KKVGGYISEKFNKVKHEIPMMSLSNAFDEEDLLKFDNDIKKAIGSSDFSYVVEPKIDGLS 137 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 +++ Y+DG L +A++RG+G GED TQ + I ++P + + ++GE+FL ++ Sbjct: 138 ISVKYKDGNLIQAVTRGDGEIGEDVTQNIKTIKSLPLNIEYD-KDLEIRGEVFLTKKDFE 196 Query: 190 QQQ------MGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQL----MSDRLKE 238 + NAR +G + D + T L + P +L D L Sbjct: 197 KINSDPNLTKKFANARNAASGSLRNLDSNITAKRNLSALFYYVPKATELKIAKQYDVLSW 256 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP--ESRHWLP 294 L +++ N V +E + + + DG+V++ E + Sbjct: 257 LDKQLIPISREIRH-CNNIQGVIERISELTDTRDQFKYDIDGIVIKVNDFNHYEEIGYTS 315 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 +W +A+K+ V + ++ +I VG++G+I+ +A+L ++L+ +V++ + + Sbjct: 316 KFPKWAIAYKFPAVVKQTKLNSIDVTVGRTGRINYIANLDEILLEGSQVKKATLHNYDYI 375 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE--NRFNS----------LTC 402 ++ +I D + + AG+ IP+I + + ++ PE N + + Sbjct: 376 KDHEIMLNDIVEIYKAGEIIPKIIRSIKEKRDGSQVVFPEPTNCPSCDSKLVKKEQEVDL 435 Query: 403 YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQ 460 Y ++ C E+ I ++ + ++ + ++G+ + L + L E L Sbjct: 436 YCLNENCVEKQIQQIEYFSSRDAMNIEGLSISIISQLFRNKIINDAIDLYELAHKKEILI 495 Query: 461 NTPG------------------IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---A 499 T + ++ +++ +GI A Sbjct: 496 ATKQKFYRKNDDGTKTEFERSLFKDKSFTNIIEAIEKSKSNSMEKFLTGLGIKYVGLRAA 555 Query: 500 ALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + +S +L +T + +Q+P TG + ++ W + + + L I Sbjct: 556 KALSKRFKSIEELAMATREEIEQVPDTGEKMSESLVNWFSDPKNQDLLWRAKKVGINF 613 >UniRef50_Q8RI94 DNA ligase n=12 Tax=Fusobacterium RepID=DNLJ_FUSNN Length = 696 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 103/579 (17%), Positives = 231/579 (39%), Gaps = 54/579 (9%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 E+I +L++ + ++ D Y+ + KS + D +D L L + + S V Sbjct: 29 EKIVKLREDLNKYRDSYYNDNKSLISDYEFDILLKELESLEEKYPQYKEISSPTTSVGAS 88 Query: 86 ---PLNGAVMHPVAHTGVRKMVDKNALSLWMR---------ERSDLWVQPKVDGVAVTLV 133 V H + + + ++ + ++ K+DG++++L Sbjct: 89 LKENKFKKVEHLHPMLSLANSYNIGEIVEFIERIKKKIPKEQELKYCLEVKLDGLSISLT 148 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM 193 YR GKL +A++RG+G GED T+ + I+++ +T+ + + ++GE+ L + Sbjct: 149 YRQGKLVRAVTRGDGFIGEDVTENILEIASIVKTLPQAI-DMEIRGEVVLPLASFEKLNN 207 Query: 194 G--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GPQLMSDRLKELA 240 N R +G + + D L + + + G + S+ +K L Sbjct: 208 ERLEKGEELFANPRNAASGTLRQLDSKIVKDRGLDAYFYFLVEADKLGLKSHSESIKFLE 267 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAA--KEPESRHWLPGQ 296 + G T + ++ + ++ + N W + LP+ TDG+V++ + + Sbjct: 268 SMGIKTTGIF-ELLETSKDIEKRINYWEKERESLPYETDGLVIKVDEINLWDEIGYTSKT 326 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W +A+K+ + + + VG++GK++ VA L V L KV+R ++ ++ Q Sbjct: 327 PRWAIAYKFPAHQVSTVLNDVTWQVGRTGKLTPVAELQEVELSGSKVKRASLHNISEIQR 386 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERT-----KPTPPENRFNS-------LTCYF 404 DI GD++ + A + IP++ + +PT + + Sbjct: 387 KDIRIGDRVFIEKAAEIIPQVVKAIKEERTGNEKVIEEPTCCPICNHKLEREEGLVDIKC 446 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNT 462 ++ C + + + ++ L + G+G + + L E L+N Sbjct: 447 INEECPAKVQGEIEYFVSRDALNIMGLGSKIVEKFIDLGYIKTVVDIFDLKNHREALENI 506 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRA---ALNASDERSWSQLLFSTEQF 519 + K L + ++ + + + + A+GI + A ++ +L+ T + Sbjct: 507 DKMGKKSIENLLNSIEESKNRDYDKILYALGIAEIGKVTSKILAKASKNIDKLMAMTFED 566 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 + G G A ++I + + +K+ L + + Sbjct: 567 LTSIEGIGEIAANEIIAFFTKEKNQKIIQGLKEKGLKFE 605 >UniRef50_A1ATJ6 DNA ligase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=DNLJ_PELPD Length = 704 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 127/611 (20%), Positives = 220/611 (36%), Gaps = 79/611 (12%) Query: 20 AVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKS--EVEDGVYDQLSARLTQWQRCFG- 76 + + E I L+Q I + Y++ E+ D YD+L L + + F Sbjct: 4 SPTTEQTKNIVAERIQELRQLIAHNNRLYYENIPPRREIHDYEYDELFKELQELESRFPE 63 Query: 77 -----SEPRDVMMPPLNG--AVMHPVAHTGVRK---MVDKNALSLWMRE------RSDLW 120 S + V G V H V + + + ++E D+ Sbjct: 64 FQSADSPTQIVGGSVSEGFKKVQHSVPMLSIENKPVTKMLSEVRSIIKELKDDAISIDIV 123 Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-GPLANSTLQG 179 +PK+DG++ ++ Y +L +A +RG+GL+GED T V IS +P+ + ++G Sbjct: 124 AEPKIDGLSCSIRYEKHQLVRAATRGDGLEGEDITVNVHSISEIPKILPLDAPEVIEIRG 183 Query: 180 EIFLQREGHIQQ--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD--- 227 E+++ Q + N R AG + + D S T L F +AW + Sbjct: 184 EVYMSNSDFKQYTAQQNKIGEKPPENPRNAAAGSLRQLDPSVTASRPLRFFAYAWGEISN 243 Query: 228 -GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA 284 + D L+ L GF + R + ++DE+ E ++EL F DG+V + Sbjct: 244 SFAKSQWDALQTLRGWGFKVCDD-IRLLYSSDELNSYFEEMQERRSELDFTIDGIVYKLN 302 Query: 285 KE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 E W A K+ P + ++ I +VG+SG ++ VA L PV L Sbjct: 303 SLSLQERVGQTNRAPRWAAAQKFPPEKRETLLQNITISVGRSGALTPVAELLPVRLLGTT 362 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA-----ERTKPTPPENRF 397 V + + + D D I+V AG IP++ VV P+ Sbjct: 363 VSNATLHNQDEVECKDFRIDDTIVVQRAGDVIPQVVSVVIEKRLSGSIPFVFPSACPVCG 422 Query: 398 NSLTC--------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + C Q + RL ++ +DG+GE + Sbjct: 423 SKAVREPREAVWKCTGGLTCPAQSLERLKHFVSRDAFNIDGLGEKNIELFYNKGLLASPV 482 Query: 450 SWLLLTP---------------EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 L + LQ G + + L+ +K R++ A+GI Sbjct: 483 DIFRLEEILSPPLLWQQKPSEFKPLQEWDGWGELSANNLFRAIRTKQKITLYRFIYALGI 542 Query: 495 PLTR---AALNASDERSWSQL----LFSTEQF------WQQLPGTGSGRARQVIEWKENA 541 P A + A + S L + E+ + G GS A +++ + A Sbjct: 543 PKVGEVTAKILADNYVSLDNWQSSMLKAAERESECYQHLISIDGIGSVVADEIVSFFAEA 602 Query: 542 QIKKLGSWLAA 552 ++ L Sbjct: 603 HNIQVLDSLKN 613 >UniRef50_C5C9H9 DNA ligase n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5C9H9_MICLC Length = 797 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 133/685 (19%), Positives = 231/685 (33%), Gaps = 142/685 (20%) Query: 16 SSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 S+ A +EE L ++++ Y++ E+ D YD L RL + Sbjct: 7 SAAQPDPQDIPAADLREEYEDLVERVRAARTAYYQRDAPEISDAEYDALYRRLEDLEALH 66 Query: 76 G------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRER----------- 116 S ++V V H + + L +W R Sbjct: 67 PELVSNDSPTQEVGGEVSEAFAPVRHGARMYSLEDVFSVEELEVWFRRAAQALTQVRPGV 126 Query: 117 -SDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LA 173 V+ K+DG+AV L YRDG+L +A +RG+G+ GED T V I +P +SG A Sbjct: 127 APRWLVEVKIDGLAVALRYRDGRLVQAATRGDGVTGEDVTANVRTIGDIPHELSGEGWPA 186 Query: 174 NSTLQGEIFLQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWA 224 ++GE+F+ + N R AG + ++D + T L +FV Sbjct: 187 EFEVRGEVFMSSAAFAELNARRAEEGQPPFANPRNAAAGALRQKDPAVTAQRPLAMFVHG 246 Query: 225 WPD----GPQLMSDRLKELATAGFTLTQTYTRAVKNADE-----VARVRNEW--WKAELP 273 G + + LA+ G ++ YTR V+ ADE V V E+ + EL Sbjct: 247 IGSVEAFGLESQHEAYDALASWGLPVSP-YTRRVEGADEEALAAVVAVIEEYGRRRHELI 305 Query: 274 FVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVA 331 DG+V++A + W A+KY P ++ I +VG++G+++ A Sbjct: 306 HEIDGIVLKADAFADQRYLGHTSRVPRWAAAYKYPPEEVHTLLRDIAVSVGRTGRVTPFA 365 Query: 332 SLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT--- 388 L PV + V + + + + GD ++V AG IP + V E+ Sbjct: 366 VLEPVTVAGSTVSLATLHNQDVVKAKGVLIGDTVVVRKAGDVIPEVVGPVLPLREKAIEA 425 Query: 389 -----KPTPPENRFNS-----------LTCYFASD-VCQEQFISRLVWLGAKQVLGLDGI 431 + P + + + + C Q R+ L ++ ++ + Sbjct: 426 GRELREFVMPAHCPSCGTPLAPAKEGDVDLRCPNARSCPAQLAGRVEHLASRGAFDVEAL 485 Query: 432 GEAGWRALHQ-----------------THRFEHIFSWLLL------------TPEQLQNT 462 GE R L Q L + L + Sbjct: 486 GEEAARWLVQGPGEDPAEHEGHVRPEGPGPITAEAQIFDLASGTPEAITGPRGEDGLTDL 545 Query: 463 P---------GIAKSKSA--------------------------------QLWHQFNLAR 481 ++K +L+ + A+ Sbjct: 546 QRSLGAVRVWREGRTKVDGRMVPSGVFTLKPYFFTAGTAKRPSAPTANTLRLFDELEKAK 605 Query: 482 KQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE----QFWQQLPGTGSGRARQV 534 QP R ++A+ I A A+ S + L + E ++ G G A + Sbjct: 606 SQPLWRTLVALSIRHVGPTAARSLATAFGSMTALRAAAEAGDRDRLAEIDGVGPIIADAL 665 Query: 535 IEWKENAQIKKLGSWLAAQQITGFE 559 IEW +++ A + + Sbjct: 666 IEWFAEDWHREIVDRWTAAGVAMED 690 >UniRef50_Q6DB58 DNA ligase B n=3 Tax=Pectobacterium RepID=LIGB_ERWCT Length = 563 Score = 570 bits (1471), Expect = e-161, Method: Composition-based stats. Identities = 252/541 (46%), Positives = 358/541 (66%), Gaps = 1/541 (0%) Query: 17 SVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 +V AVCP W RA +EI L+QQ++QWDD Y+ EGKS +ED VYDQL +L QW +CF Sbjct: 22 AVAAVCPDWDNTRASKEIDALRQQLEQWDDVYYTEGKSPIEDDVYDQLREQLNQWSQCFQ 81 Query: 77 SEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRD 136 + P NG HPVAHTG++K+ D+ L W+ +R DLWVQPKVDGVAVTLVY+ Sbjct: 82 PQNVIPARLPDNGKQPHPVAHTGLKKLSDRVQLVQWIVQREDLWVQPKVDGVAVTLVYQH 141 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI 196 GKL A+SRGNGL+GEDWT+K LI +P +SG ++ LQGE+FL+ H Q GG+ Sbjct: 142 GKLVSAVSRGNGLQGEDWTEKARLIPDIPHLLSGAPSSFVLQGELFLKMTDHRQYAQGGV 201 Query: 197 NARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKN 256 NAR+ VAG M R S L+ +G+FVW WPDGP+ M +RL +L GF +T YT A+++ Sbjct: 202 NARSIVAGEMRRHQPSPVLSQIGLFVWEWPDGPKAMPERLDKLKEMGFAMTADYTHAIES 261 Query: 257 ADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKA 316 +V + R+ W+ + LPFVTDGVV+R KEP+ R+W A+W +AWKY PV QVAEV Sbjct: 262 FADVEKWRDHWYHSPLPFVTDGVVIRQTKEPQGRYWRNTSADWAIAWKYPPVHQVAEVVD 321 Query: 317 IQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPR 376 + F+VG++GK++VV ++P+ LDDK V RVN+GS+ RW++WD+ PGD++ VSLAGQGIPR Sbjct: 322 VAFSVGRTGKVAVVLKISPLKLDDKSVSRVNVGSLSRWKQWDVLPGDRVSVSLAGQGIPR 381 Query: 377 IDDVVWRGAERT-KPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG 435 +D+VVWRG ER +P E+ F++ +C+ S VCQ+QF++RLVWL + L L G+ + Sbjct: 382 LDNVVWRGTERPVIVSPDEHNFHAFSCFRYSVVCQQQFLARLVWLSGEHGLNLAGMRDGM 441 Query: 436 WRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 W L Q + SWL LT QL G+ ++ ++ AR++ + W++A+GIP Sbjct: 442 WLRLMQHDLLGDVLSWLYLTEAQLNAVNGMGDKRARDIYMSLQSARQKSLSHWLLALGIP 501 Query: 496 LTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + R+A++A + +W L T Q W+Q G G RA +++ + + + +L + L + I Sbjct: 502 VPRSAISALNNVNWLALQQRTAQQWRQFSGIGERRAEEIMAFLNHPIVMELIARLDLEGI 561 Query: 556 T 556 Sbjct: 562 H 562 >UniRef50_B9D1H8 DNA ligase n=2 Tax=Campylobacter RepID=B9D1H8_WOLRE Length = 647 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 114/570 (20%), Positives = 222/570 (38%), Gaps = 44/570 (7%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 ++E + W Y+ + D YD+L ++ +++R S + V Sbjct: 3 KKEYLEAVDTLNAWAKAYYTDDAPIATDEEYDELYHKVLEFERANPGDISMFSPTKRVGG 62 Query: 85 PPLNGAV--MHPVAHTGVRKMVDKNALSLWMRER----SDLWVQPKVDGVAVTLVYRDGK 138 +G V H V + + L W++ + +QPK DG ++ L+Y +G Sbjct: 63 EVSDGFVKARHSVRMWSMEDIFSFEELLAWLKRGDKEGLEFALQPKFDGASLNLLYENGA 122 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI-- 196 L +AI+RG+G+ GED T +I +P ++ ++GE+ + + + Sbjct: 123 LVRAITRGDGITGEDVTSNAKVIKNIPLQIAYN-GRIEIRGEVVIAKNDFDEINFARAQR 181 Query: 197 ------NARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD---GPQLMSDRLKELATAGFTL 246 N R AG + + D + T L W + + G + S + + + GF Sbjct: 182 GEPQLSNPRNAAAGSLRQLDSAVTASRRLRFKPWGYGEQNLGLETYSQMMDFIYSQGFE- 240 Query: 247 TQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVA 302 + + + + A+++ + + PF+ DG+VVR E + +++VA Sbjct: 241 REEFFKICRTAEQIEEAYKQLVAQRDSKPFMMDGLVVRVQSIAASEELGYTEKFPKFMVA 300 Query: 303 WKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPG 362 +K+ + + + + F VG+SG ++ V L PV +D V+ + + + + G Sbjct: 301 YKFPAIEKTTRLLDVAFQVGRSGVVTPVGVLEPVNIDGATVKSATLHNFDEIERLGVQKG 360 Query: 363 DQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-----------YFASDVCQE 411 D I + +G IP+I V + + ++ P E C + C+ Sbjct: 361 DFISIIRSGDVIPKITGVFKQRRDGSQ-MPIERPRECPVCGSMLLDEGVFVKCQNLECKA 419 Query: 412 QFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSA 471 + I+ L+ +K+ L +DG+GEA L + I LT + L + G K A Sbjct: 420 RVINSLIHFASKKCLNIDGLGEAIVNQLFEAGLVAKIADIYELTAQDLASLEGFKDKKIA 479 Query: 472 QLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSW-SQLLFSTEQFWQQLPGTGSGR 530 L +R ++ ++GI + + + + G G Sbjct: 480 NLLGAIEASRTPALHSFIASLGIEHIGEVAAKKIAQIYPQNWRELSFGEVAAIEGFGEAM 539 Query: 531 ARQVIEWKE-NAQIKKLGSWLAAQQITGFE 559 A E+ + N Q + Q +E Sbjct: 540 AESYAEFMQVNRQNLDEILRFVSPQAQIYE 569 >UniRef50_Q2GLI8 DNA ligase n=10 Tax=Anaplasmataceae RepID=DNLJ_ANAPZ Length = 677 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 106/583 (18%), Positives = 202/583 (34%), Gaps = 56/583 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMM 84 S ++ ++ L Q+K D Y + E+ D YD L + F Sbjct: 1 MSDNDSRRRLADLNAQLKLHDVLYHEHDAPEISDAQYDALVQEKRELLEKFPELSAYNDY 60 Query: 85 PPLNG---------AVMHPVAHTGVRKMVDKNALSLWM-----------RERSDLWVQPK 124 + G + H + + ++ + +PK Sbjct: 61 EGVIGALTVDARLPKIAHREPMLSLENSFTIQDVEKFISRVKRSLNMDPEVSITIACEPK 120 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQ 184 +DG++ +Y G L + +RGNG GED T +I +P ++ ++GEI++ Sbjct: 121 IDGLSFAALYEKGSLIRVATRGNGHLGEDITNTAKVIRKLPHKIANAPEVLEVRGEIYMH 180 Query: 185 REGHIQQQM--GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGP-QLMSDRLKELA 240 + + N R AG + + + L + + LK+LA Sbjct: 181 HSDFEKLKDVCNFANPRNAAAGSIRQLNPKIAEERNLRYVAYCIVNSALASQEAILKQLA 240 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWLPGQ 296 GF T T N D+ + ++ L + DG+V + Sbjct: 241 EWGF-CTHTEVLFADNMDDALSFHTRMYNTRSTLGYDIDGIVYKVNDTHLQKLLGSTSKY 299 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 W A K+ + +++ I VG++G I+ +A L P+ + V R ++ ++ Sbjct: 300 PRWATAHKFPSTEAITKLRDISVQVGRTGVITPIAELEPINIGGTLVSRASLHNLNEIAR 359 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGA-------ERTKPTPPENRFNSLT-------- 401 DI GD ++V AG+ IP++ V E P+ + ++L+ Sbjct: 360 KDIRIGDSVIVKRAGEVIPQVVGVDHTARCNSAVPEEYVFPSHCPSCGSTLSRAPGEVAM 419 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE---- 457 A CQ Q + R+ ++ L + G+GE ++ L + Sbjct: 420 RCTAELSCQAQVLERVKHFVSRDGLNIVGLGEKQIEFFCNASYISNVADIFSLREKISHM 479 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLF 514 L G + A L + N + + ++ A+GI A L A RS+S + Sbjct: 480 NLSAEHGWGEKSIALLINAINASTTVKLSNFIFALGIRFIGKGAAKLIAEHYRSYSAWVR 539 Query: 515 -----STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 + + + G G + + + ++ L Sbjct: 540 AMTSLANGEDPDNIHGIGLKSIESLRAFFSSEDNLRVLQTLEE 582 >UniRef50_A5CQU5 DNA ligase n=8 Tax=Bacteria RepID=DNLJ_CLAM3 Length = 853 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 119/660 (18%), Positives = 215/660 (32%), Gaps = 123/660 (18%) Query: 20 AVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG--- 76 A PA A + L+ +I++ D+Y+ S + D YD L L + Sbjct: 17 ATTPA-DLEAASARVDALRTEIERHRDEYYGADASTLSDAEYDALVHELEALEEAHPTLR 75 Query: 77 ---SEPRDVMM---PPLNGAVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQ 122 S + V L V H + + + L+ W + R + Sbjct: 76 SQDSPTQTVGGRAETTLFAPVTHAERMLSLDNVFSEEELAEWAAKVERDAGSGRVRYLSE 135 Query: 123 PKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV--SGPLANSTLQGE 180 K+DG+A+ L Y G L A +RG+G+ GED TQ V + VP+ + SG ++GE Sbjct: 136 LKIDGLAINLRYEHGVLVTAATRGDGVVGEDVTQNVLTMGTVPERLMGSGHPPLVEVRGE 195 Query: 181 IFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDT----------LNSLGVFV 222 IF + N R AG + ++++ + + L + V Sbjct: 196 IFFPVAEFDELNARQLEVGERVFANPRNAAAGSLRQKEEGKSPARLELMRARIRRLRMLV 255 Query: 223 WAWPDGP----------QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKA 270 P S+ LA G ++ T+ R + EV +A Sbjct: 256 HGIGAWPVRELASDAHVSAQSEVYGLLAGWGLPIS-THFRVFDDISEVTEFVRRHGAHRA 314 Query: 271 ELPFVTDGVVVRAAKE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKIS 328 E+ DG+VV+ E W A+KY P + I +VG++G+ + Sbjct: 315 EVEHQIDGIVVKVDDLGLHEELGATSRAPRWATAYKYPPEEVNTTLLDIVVSVGRTGRAT 374 Query: 329 VVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT 388 A + V + +V++ + + + + + GD +++ AG IP + V + T Sbjct: 375 PFAVMEKVEVAGSEVRQATLHNQQVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELRDGT 434 Query: 389 --KPTPPENRFNS-----------LTCYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEA 434 + P + + C Q R+ + ++ L ++G+GE Sbjct: 435 EREFVMPTLCPECQTPLRPAKEGDIDLRCPNARSCPAQVRGRVEHVASRGALDIEGLGEV 494 Query: 435 GWRALHQTHRFEHI-----FSWLLLTPEQLQNT---------------PGIAK------- 467 AL Q E LT L + Sbjct: 495 AAAALTQPLEPEDPPLETEAGLFELTMADLVPITVVVRDAETGMVKVDEKTGEAKRVTPF 554 Query: 468 --------------------------SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR--- 498 + L + A+ Q R ++A+ I Sbjct: 555 RRRRAPKRDGVFDPAAPWGDEDSVPSKSAEVLLENLDKAKTQDLWRILVALSIRHVGPVA 614 Query: 499 AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 A A S + ++ + + G G A +++W E +++ + Sbjct: 615 ARALAGWFGSLDAIRSASREELAAVDGVGGIIADALLDWFEVDWHREIVDRWRKAGVVME 674 >UniRef50_C7QYX3 DNA ligase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QYX3_JONDD Length = 798 Score = 562 bits (1450), Expect = e-159, Method: Composition-based stats. Identities = 120/646 (18%), Positives = 215/646 (33%), Gaps = 116/646 (17%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVM 83 QE+ RL + I+++ +Y+ +G+S V D YD L A L + G S + V Sbjct: 52 SLQEQWERLARLIQRYQFEYYIQGESSVPDADYDALLAELVAVEEQLGGAPQGSPTQRVG 111 Query: 84 M--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLV 133 V H + L W + K+DG+AV+L Sbjct: 112 GTFSTEFEEVDHRQPMLSLDNAFSLEELQAWADRVHGELSGGAVSYLCEVKIDGLAVSLT 171 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLA----NSTLQGEIFLQREGHI 189 Y G+L +A++RG+G GED T V I ++PQ + G A ++GE+F++ Sbjct: 172 YERGELVRALTRGDGQTGEDVTLNVQTIRSIPQRLGGDPAFHPQVVEIRGEVFMKVADFA 231 Query: 190 QQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD---------GPQL 231 N R AG + ++D T L ++ Sbjct: 232 DLNDSQARQGGKTFANPRNAAAGSLRQKDPRVTAQRRLSMYAHGIGALEWDGQSPVDLAR 291 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKE--P 287 SD G ++ ++ + D V R + + + DG V++ + Sbjct: 292 QSDVYALYQQWGIPVS-SHNSVEHDLDAVTRKIEYYRENRHSIEHELDGFVIKVDEVAAQ 350 Query: 288 ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 + W +A+KY P + IQ VG++G+++ + PV++ V Sbjct: 351 KQLGSTSRAPRWAIAFKYPPEEVTTRLLDIQVNVGRTGRVTPFGMMEPVLVAGSTVSMAT 410 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TKPTPPENRFNSLT- 401 + + + D+ PGD ++V AG IP I V PT + + Sbjct: 411 LHNFHEVRRKDVRPGDTVIVRKAGDVIPEILGAVESLRPDGLPQWEPPTHCPSCGTEIRE 470 Query: 402 -------CYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH---------- 443 + C Q R+ L ++ ++ +G AL Sbjct: 471 AKEGDKDLRCPNAQSCPSQLRERVFALASRGAFDIEALGWESAVALCDPESSRPVGPDAP 530 Query: 444 ---------RFEHIFSWLLLTPE------QLQNTPGIAKSKSA----------------- 471 L E L++ + K Sbjct: 531 QLDGPPLTPVLTSEAHIFDLADENSSLTRSLKDVVVWRERKLKSGTRWELVPYFYTRATA 590 Query: 472 -----------QLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTE 517 +L+ + A+ QP R ++A+ I A A++ S ++ ++ Sbjct: 591 SKSSVPTATTVKLFEEVQKAKSQPLWRVLVALSIRHVGPTAARALATEFGSMDRIRAASV 650 Query: 518 QFWQQLPGTGSGRARQVIEWKE----NAQIKKLGSWLAAQQITGFE 559 + G GS A V+EW N + + A ++ + Sbjct: 651 SELAAVDGVGSTIAESVVEWFREVDGNQWRPAIVAAWAKAGVSMED 696 >UniRef50_C6DJC3 DNA ligase B n=5 Tax=Enterobacteriaceae RepID=LIGB_PECCP Length = 562 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 245/554 (44%), Positives = 360/554 (64%), Gaps = 1/554 (0%) Query: 4 WMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQ 63 ++ I++G + S+V VCP W R+++EI L+QQ++QWDD Y+ EGKS V D VYDQ Sbjct: 8 FLIIIVGGISGFSAVAGVCPDWDNTRSKKEIDALRQQLEQWDDVYYTEGKSPVADDVYDQ 67 Query: 64 LSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQP 123 L +L QW CF + + P +G +HPVAHTG++K+ D+ L W+ +R D+W+QP Sbjct: 68 LREQLNQWLGCFQPQSVASVRLPDHGKQLHPVAHTGLKKLSDREQLVQWIAQREDVWIQP 127 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DGVAVTLVY+ GKL A+SRGNGL+GEDWT+KV LI +P ++ + LQGE+FL Sbjct: 128 KIDGVAVTLVYQHGKLESAVSRGNGLQGEDWTEKVRLIPEIPHLLTNVPSLLVLQGELFL 187 Query: 184 QREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAG 243 + H Q GG+NAR+ VAG M R S L+ +G+F+W WPDGP+ M +RL++L G Sbjct: 188 KMTDHRQHIQGGVNARSVVAGEMRRHQPSPVLSQIGLFIWEWPDGPKTMPERLEKLTEMG 247 Query: 244 FTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAW 303 F +T YT A+ + + + + W+ LPFVTDGVV+R KEP+ R+W A+W +AW Sbjct: 248 FAMTADYTHAIGSFADAEKWHHYWYHNPLPFVTDGVVLRQTKEPQGRYWRNTSADWAIAW 307 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 KY P QVAEV + F+VG++GK++VV L + LDDK V RVN+GS+ RW++WD+ PGD Sbjct: 308 KYPPFHQVAEVIDVVFSVGRTGKLAVVLKLNLLKLDDKSVSRVNVGSLSRWKQWDVLPGD 367 Query: 364 QILVSLAGQGIPRIDDVVWRGAERTKPT-PPENRFNSLTCYFASDVCQEQFISRLVWLGA 422 ++ VSLAGQGIPR+D+VVWR ER P E+ F++ +C+ S VCQ+QF++RLVWL Sbjct: 368 RVSVSLAGQGIPRLDNVVWRSTERLPIVSPSEHDFHAFSCFRYSTVCQQQFLARLVWLSG 427 Query: 423 KQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARK 482 + L L G+ + W L Q E + SWL LT QL G+ ++ ++ AR+ Sbjct: 428 EHGLNLTGVRDGMWLRLMQHGLLEDVLSWLSLTEAQLNAVTGMGDKRARDIYKSLQSARQ 487 Query: 483 QPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 P +RW++A+G+P+ R+A++A + +W L T Q W+Q G G RA +++ + ++ Sbjct: 488 MPLSRWLLALGLPVPRSAISALNHVNWLALQQWTAQQWRQFSGIGERRAEEIMAFLKHPA 547 Query: 543 IKKLGSWLAAQQIT 556 + + + L A+ I Sbjct: 548 VVEFIARLDAEGIH 561 >UniRef50_Q4FPL3 DNA ligase n=4 Tax=SAR11 cluster RepID=DNLJ_PELUB Length = 676 Score = 560 bits (1445), Expect = e-158, Method: Composition-based stats. Identities = 104/584 (17%), Positives = 211/584 (36%), Gaps = 56/584 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + + E + ++ + Y+ + K V D +D L + +R + S Sbjct: 1 MNDKDLEIEYLKKIDLFQRHNKHYYDKNKPIVSDQEFDLLKKDIIDLERKYKFLKSEYSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR-----------ERSDLWVQPKV 125 + + P + H V + ++ L + + + +PK+ Sbjct: 61 TKSIGFKPSKNFQKIKHKVPMLSLGNAFNEEDLKNFEKKIINFLSLKDVNTIEYSAEPKI 120 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFL 183 DG++ +L+Y DGKL K +SRG+G +GED TQ + I +P ++ ++GE+F+ Sbjct: 121 DGISASLIYIDGKLTKGLSRGDGNEGEDITQNLKTIKDIPLEITKSNFPKEIDIRGEVFI 180 Query: 184 QREGHIQQQMGGINARAKVAGLMMRQDDSDTLN-SLGVFVWAWPD----GPQLMSDRLKE 238 + + + N R +G + +++ T L + + + + L+ Sbjct: 181 ENNDFKKIKDKFANPRNAASGSLRQKNSLITAKIPLKFIAYTYGYEKKMNIKNQTSFLEN 240 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRN-EWWKAELPFVTDGVVVRAAKEPES--RHWLPG 295 L GF + + + + + E + EL F DG+V + + Sbjct: 241 LKLWGFKTNPFNKKIIGVKNLMLNHKELEEKRKELAFDIDGIVYKVNDFDLQKRLGFAAN 300 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A K+ + ++E+ I+ +G++G ++ VA + PV + V + + Sbjct: 301 APRWAIAHKFSANSSISEIMNIEIQIGRTGALTPVAKIKPVNIGGVIVSNATLHNEDEIV 360 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT--KPTPPENRFNS-------------- 399 DI GD + V AG IP + V + ++ K P + Sbjct: 361 RKDIRVGDTVTVERAGDVIPHVVSVDLKKRKQNSKKFIFPLKCPSCGSKTIKDYNETTKR 420 Query: 400 ----LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 C C++ I R+ +K +DG G+ L Sbjct: 421 QDAVRRCASEGFECEKIAIERIKHFVSKDAFNIDGFGKKIVENFWNLKLVRLPQDIFKLN 480 Query: 456 PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 +++ G K A L + R++ ++GI A L A ++ S Sbjct: 481 YNKIEELEGWGKLSVANLRFSIEEKKNISLERFIYSLGIRHIGQENAKLIARHLKTASNF 540 Query: 513 LFST----EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 + + + G G + + + ++ N K+ S L Sbjct: 541 FRLSGEKNIESLSNIDGIGITQIQSIKKFFLNKTNLKVLSELEK 584 >UniRef50_D1S0P4 DNA ligase B n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S0P4_SEROD Length = 567 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 259/560 (46%), Positives = 364/560 (65%), Gaps = 4/560 (0%) Query: 1 MKVWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV 60 ++V M +L G++ + CPAW P R Q EI+ L+ Q+++WD Y+++G S +ED V Sbjct: 6 IRVGMTLLGGLMFCGALRAESCPAWRPERLQLEITALKNQLERWDVAYYQQGDSLIEDQV 65 Query: 61 YDQLSARLTQWQRCFGSEPRDVMMPPL-NGAVMHPVAHTGVRKMVDKNALSLWMRERSDL 119 YD L +L W RC G E + L G HPVAHTG+ K+ D A+ W+R RSD+ Sbjct: 66 YDSLRQKLQLWHRCAGLERVEEPSSLLPAGKTPHPVAHTGLHKLADPAAVDQWLRGRSDV 125 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQG 179 WVQPKVDGVA+TLVYRDG+L A+SRGNGL+GE+W +KV I A+P V A LQG Sbjct: 126 WVQPKVDGVAITLVYRDGELAAAVSRGNGLQGENWLEKVRAIPAIPAAVKDAPATLILQG 185 Query: 180 EIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKEL 239 E+FL GH Q+ GGINAR+ VAG +M+ S L +G+FVWAWPDGP+ M+ RL++L Sbjct: 186 ELFLMVNGHQQKIHGGINARSTVAGALMKNRLSPVLQQIGLFVWAWPDGPKEMTQRLQQL 245 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEW 299 A GF L Y++ V + D+V + R W++ LPFVTDGVV+ A+ P+ R+W +W Sbjct: 246 AAMGFPLALAYSQPVSSLDDVRQWRERWYREALPFVTDGVVIHQARSPQGRYWQAKPGDW 305 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 VAWKY PV QVA V ++F+VG++GKI+VV L P+ +DDK V RVN+GS+ RW++W + Sbjct: 306 AVAWKYPPVQQVARVNDVEFSVGRTGKIAVVLKLDPLRMDDKWVSRVNLGSLPRWRQWAV 365 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERTKP-TPPENRFNSLTCYFASDVCQEQFISRLV 418 PGDQ+ +SL G GIPR+D V WR ER +P P +R+++L+C+ C++QF++RLV Sbjct: 366 VPGDQVAISLMGNGIPRLDKVAWRTTERIEPSAPAADRYHALSCFTWLPECRQQFLARLV 425 Query: 419 WLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFN 478 WLG Q LGL G+ E+ W+ L H+ WL+LTPEQL + PGI + + QF Sbjct: 426 WLGGPQGLGLHGVSESTWQVLIDQGLVRHLLDWLVLTPEQLMSAPGIGDKRGRSIHRQFQ 485 Query: 479 LARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWK 538 LAR+QPF RW++A+G+PL+ A +SW Q+ W+++ G G+ +A Q+ + Sbjct: 486 LARQQPFARWLIALGVPLSLQQTQAL--KSWHQIRQLPVGEWRKMTGIGAKKAEQITGFL 543 Query: 539 ENAQIKKLGSWLAAQQITGF 558 ++ L S L AQ+ITGF Sbjct: 544 QHPPFLTLVSTLEAQEITGF 563 >UniRef50_A7GIK6 DNA ligase n=28 Tax=Clostridiales RepID=DNLJ_CLOBL Length = 664 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 103/578 (17%), Positives = 203/578 (35%), Gaps = 53/578 (9%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMMPP 86 E++ L +++ Q+ +Y+ + D YD L ++ S + V Sbjct: 6 EKMKELVEELNQYAYEYYVLDNPSISDKEYDLKYDELVILEKKTEVTLPYSPTQRVGDKI 65 Query: 87 LN--GAVMHPVAHTGVRKMVDKNALSLWMRERS-----------------DLWVQPKVDG 127 L H + K + L W V K DG Sbjct: 66 LGEFSKYTHKGRLWSLDKAQNMEQLIEWHNRNLKVIEQYNSMSEDKLPELRYIVTKKFDG 125 Query: 128 VAVTLVY-RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQRE 186 + V Y +G L K+ +RG G+ GED T ++ I VP + + GE + + Sbjct: 126 LTVNCTYDENGILIKSATRGTGIIGEDITAQIKTIKTVPLKIKNSY-VIEVHGEAIMTKT 184 Query: 187 GHIQQQM----GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG----PQLMSDRLK 237 + N R AG + D +T L F + + + + Sbjct: 185 AFEEYNKAAQVPLKNLRNGAAGALRNLDIKETARRNLSAFFYDVGYNEGPEFKSYREMMN 244 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK--EPESRHWL 293 + G Y + N +EV + + EL + DG V+ E + Sbjct: 245 FIRNMGLP-QDKYIKECTNMEEVEKEIEYIESIRGELDYDIDGAVIVVDDIKTREILGYT 303 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 +W +A+K++ ++ +++ VG+SG+++ A L PV L V+R + ++ Sbjct: 304 IKFPKWAIAYKFEAKEITTKLLDVEWNVGRSGRVTPTALLEPVELGGVTVKRATLNNMDD 363 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVW---------RGAERTKPTPPENRFNSLTCYF 404 + ++ G ++LV + IP I VV + +R N + Y Sbjct: 364 IKRKNVKLGAKVLVRRSNDVIPEIMGVVEESLEESEEIQAPDRCPYCNSHLVQNGVHYYC 423 Query: 405 AS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP 463 + C+ Q + +V +++ + + G E L + + I + E+L Sbjct: 424 ENTLSCKPQMVKSIVHFASREAMNIAGFSEKTAEQLFEKLDIKSIADLYKIKKEELLTLE 483 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQFW 520 KS L ++ ++ A+GIP ++ + +T + Sbjct: 484 KFKDKKSQNLIDAIQNSKNCDLASFIYALGIPNVGKKTANDLVMKFKTLESIKNTTIEQL 543 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 ++P G A+ + ++ E+ +I L + + Sbjct: 544 VEVPDVGEIVAKSIYDFFEDEKIISNIEELLNLGVKPY 581 >UniRef50_B5Z6Y6 DNA ligase n=17 Tax=Helicobacter RepID=DNLJ_HELPG Length = 658 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 106/562 (18%), Positives = 212/562 (37%), Gaps = 44/562 (7%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 ++Q+E + Y+ +S V D VYD+L L ++ S + V Sbjct: 3 KSQKEYLERIAYLNTLSHHYYNLDESIVSDAVYDELYQELKAYEEKNPNDIQANSPTQKV 62 Query: 83 MMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGVAVTLVY 134 H + + + +++ L W++ PK+DGV++ L+Y Sbjct: 63 GATATNSFNKNPHLMRMWSLDDVFNQSELQAWLQRILKTYPSASFVCSPKLDGVSLNLLY 122 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG 194 + GKL A +RGNGL+GE T I+ +P ++ ++GE+ + +E Sbjct: 123 QHGKLVSATTRGNGLEGELVTNNAKHIANIPHFIAYD-GEIEIRGEVIISKEDFDALNKE 181 Query: 195 --------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD---GPQLMSDRLKELATA 242 N R +G + + D T L W + L + + Sbjct: 182 RLNANEPLFANPRNAASGSLRQLDSEITKKRKLQFIPWGVGKHSLNFLSFKECLDFIVSL 241 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWWKAELPF--VTDGVVVRAAKE--PESRHWLPGQAE 298 GF+ Q Y KN E+ + + F + DG+V+ + + + + Sbjct: 242 GFSAIQ-YLNLNKNHQEIEENYHTLIREREGFFALLDGMVIVVNELNIQKELGYTQKSPK 300 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 + A+K+ + + ++ + VG+SG I+ VA L PV + + R + + ++ + Sbjct: 301 FACAYKFPALEKHTKIVGVINQVGRSGAITPVALLEPVEIAGAMINRATLHNYSEIEKKN 360 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTK-----PTPPENRFNSLTC-----YFASDV 408 I D+++V +G IP+I + + ++ P + L C Y + Sbjct: 361 IMLNDKVVVIRSGDVIPKIIKPLETYRDGSQQKIMRPKVCPICSHELLCEEIFTYCQNLN 420 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKS 468 C + L+ +K L + G+G+ L + + L E L Sbjct: 421 CPARLKESLIHFASKDALNIQGLGDKVIEQLFEEKLIVNALDLYALKLEDLMRLDKFKIK 480 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGS 528 K+ L ++ P R + A+GI + + + +L +E + ++ G G Sbjct: 481 KAQNLLDAIQKSKNPPLWRLINALGIEHIGKGASKTLAKYGLNVLEKSEAEFLEMEGFGV 540 Query: 529 GRARQVIEWKENAQIKKLGSWL 550 R ++ + + ++ L Sbjct: 541 EMVRSLVNFYAS--NQEFIRSL 560 >UniRef50_B2UZ23 DNA ligase n=22 Tax=Firmicutes RepID=DNLJ_CLOBA Length = 667 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 99/576 (17%), Positives = 202/576 (35%), Gaps = 51/576 (8%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMMPP 86 E I L + + ++ DY+ V D YD+ L ++ G S + Sbjct: 6 ERIKELVEILNKYSYDYYVLDNPSVSDKDYDKKYDELKLLEKETGVVLPYSPTLRIGDIV 65 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLW----------------VQPKVDGV 128 L+G H + K + + W K DG+ Sbjct: 66 LDGFNKYTHKGKLWSLDKAQSLDEIKDWHNRNIKFVNDMRAQGEDLPDLKYIATKKFDGL 125 Query: 129 AVTLVY-RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 V L Y +G L + +RGNG GE+ T +V I ++P + + GE + +E Sbjct: 126 TVNLTYNEEGMLEVSATRGNGEIGENVTAQVKTIKSIPLKLQENHDLFEVHGEAIMTQEA 185 Query: 188 HIQQQM----GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG----PQLMSDRLKE 238 + N R AG + + +T L F + + + + Sbjct: 186 FEKYNSSADSPLKNLRNGAAGALRNLNVKETARRDLSAFFYDVGYKEGYQFKTYLEMMDF 245 Query: 239 LATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLP 294 + G + Y + + +++ + + +L + DG+V+ + Sbjct: 246 IKEKGLPV-DDYLKVCVSIEDIKNEIDYIEKIRFDLNYDIDGLVIAIDDIRTRELLGYTV 304 Query: 295 GQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRW 354 +W +A+K++ ++ +++ VG+SG+I A L PV L V+R + ++ Sbjct: 305 KFPKWAIAYKFEAQEATTKLVDVEWNVGRSGRIGPTAILEPVELAGVTVKRATLNNMDDI 364 Query: 355 QEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT-KPTPPENRFNS--------LTCYFA 405 + + G + + + IP I + E + + PP + Sbjct: 365 KRKGVRIGADVFIRRSNDVIPEIMGTLENTLENSEEIFPPTECPACGSHVVLNGAHYFCE 424 Query: 406 S-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 + C+ Q + +V ++ + + G E L + + I L E L N Sbjct: 425 NTLSCKPQLVKTIVHYASRDAMNIAGFSEKTAEQLFEKLNIKSISDLYKLKKEDLINLEK 484 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 K+ L + +++ ++ A+GIP A + +S L +T + Sbjct: 485 FGDKKAENLLNAVEGSKECKLYSFIYALGIPNVGVKTAKDIVNKFKSIDGLKNATFEELV 544 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + G A+ +IE+ + ++ L + + Sbjct: 545 SVQDVGDIVAQDIIEFFKEEKVISTIDELLSLGVNP 580 >UniRef50_B8D6X9 DNA ligase n=3 Tax=Buchnera aphidicola (Acyrthosiphon pisum) RepID=DNLJ_BUCAT Length = 676 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 103/583 (17%), Positives = 213/583 (36%), Gaps = 56/583 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRD 81 +++I +L++ + +++ Y +S + D YD L +L + + S + Sbjct: 2 TSTKDKIEKLRKILLKYEYFYHTLNQSIISDAEYDYLFRQLYELELKNKELIPSDSPTQK 61 Query: 82 VMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVDGVAV 130 V L + H + D N + + + K+DGVA+ Sbjct: 62 VGSHILQKFKKIKHFSPMLSLENTFDVNGYLNFKKRIKKSIHNNEPLSFCCELKLDGVAI 121 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGH 188 +++Y +G +A +RG+G +GE+ T +I ++P + G ++GE+F+ + Sbjct: 122 SIIYEEGIFVRAATRGDGFEGENITSNARMIDSIPLKLKGIDIPKRLEIRGEVFMLKSNF 181 Query: 189 IQQQMG--------GINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGP-------QLMS 233 I+ N R AG + D + T +F D Sbjct: 182 IKLNKKYKLNQNKYFSNPRNAAAGSLRHIDPNITAERKLIFSCHGCDFFVKTNKELTTHY 241 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESR- 290 RL + + G + + + E+ + + + L F DG+V++ + Sbjct: 242 QRLMKCLSWGIPVNKEIVICSSDI-EIIQFYKKIAQKRNFLDFDIDGIVIKVNSLELQKK 300 Query: 291 -HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A+K+ P ++ + ++F VG++G I+ VA PV + + + ++ Sbjct: 301 IGSTTKSPRWAIAFKFSPKERITTLNDVKFQVGRTGVITPVAYFNPVYISGVMISKASLH 360 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS-------- 399 + + ++ D I + +G IPR+ +V+ R K P Sbjct: 361 NKNEIERLNLHFNDTITICRSGDVIPRLLNVIEIRRCDNAKKIIFPSFCPVCNTELLENI 420 Query: 400 ---LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP 456 L + C Q L +K+ L + G+G L + ++ + L Sbjct: 421 EEKLIRCHSGLTCDAQKKQALYHFFSKKSLYVVGLGPKIINELVEKGLVKNPIDFFYLKD 480 Query: 457 EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLL 513 L + K KS ++ + +K ++ A+GIP A A+ +L+ Sbjct: 481 IDLIQLKNVGKRKSIKIINSIKKCKKTTLKCFIYALGIPGVGEVVAGKIANYFIKLDKLM 540 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWL-AAQQI 555 S + G G + + + +++ L I Sbjct: 541 NSNILELNCISGVGKIISNNIFNYFSTISNREMVVKLIKQAGI 583 >UniRef50_Q2GDR2 DNA ligase n=2 Tax=Neorickettsia RepID=DNLJ_NEOSM Length = 670 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 110/571 (19%), Positives = 220/571 (38%), Gaps = 48/571 (8%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE--PRDVMMPP 86 A++EI L +++ + + Y+++ E+ D YD + R + S P V P Sbjct: 2 EAKKEIQELYEKLLRHNKKYYQDDSPEITDAEYDSIKDRYLKLLEANPSLGFPVVVGYPA 61 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRER---------SDLWVQPKVDGVAVTLVYR 135 V H +R + + L ++ + + +PK+DGV+ + Y Sbjct: 62 SEKFQKVKHLSPMLSLRNIFSEEELVEYIEKTKRFLNLKSALEFLCEPKIDGVSFSARYV 121 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 +GKL +RG+G GE+ + +I+ P + ++GE+FL + + G Sbjct: 122 NGKLVSCATRGDGKIGENIIDNMKVINGFPIEIMDVPDLLEVRGEVFLDHDTFQTLE-GF 180 Query: 196 INARAKVAGLMMRQDDSDT-LNSLGVFVWAW--PDGPQLMSDRLKELATAGFTLTQTYTR 252 N R AG + + + T +L F ++ DG + D L L+ GF Sbjct: 181 SNPRNAAAGSLRQLNPEITNERNLQYFAYSASKIDGIEHQEDVLHFLSGRGFMTNP-LRL 239 Query: 253 AVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPE--SRHWLPGQAEWLVAWKYQPV 308 A E+ + ++++ + DG+V + L W +A K+ Sbjct: 240 ASSKVPEIMSFYDSVYRRRSQIKYDIDGLVYKVNDLKLHARLGTLSDAPRWAIAHKFPSH 299 Query: 309 AQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVS 368 ++ I+ +VG++G I+ VA L P+ + + R ++ + + DI GD ++V Sbjct: 300 RAKTILEKIKLSVGRTGIITPVAHLKPITIGGVVISRASLYNEDELERKDIREGDLVIVE 359 Query: 369 LAGQGIPRIDDV-VWRGAERTKPTPPENRFNS-----------LTCYFASDVCQEQFISR 416 AG IP++ +V + + + P+ + T S C EQ I + Sbjct: 360 RAGDVIPKVLEVDISYRTNQERFIFPDKCPSCSSTLIRKNNEAATRCNNSKKCPEQVIQQ 419 Query: 417 LVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTPGIAKSKSAQLW 474 + L + Q +DGIG + + L ++++ G + + Sbjct: 420 IKHLVSAQAFDIDGIGTSHISFFIEKGFISEPADIFRLDKHRDEIKKYDGWGEKSVENIL 479 Query: 475 HQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFS---------TEQFWQQ 522 +RK +++ ++GI A +S++ TE + Sbjct: 480 KNIKNSRKISLEKFIFSLGIKNIGEKTAYMLAQQFKSFANWFDKMSMLKDDTQTEDEIRN 539 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 L G GS ++++ ++ + L+ Sbjct: 540 LDGMGSCICESLLDFFSDSDNCNMVKSLSNH 570 >UniRef50_A1SMA5 DNA ligase n=1 Tax=Nocardioides sp. JS614 RepID=DNLJ_NOCSJ Length = 752 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 121/605 (20%), Positives = 214/605 (35%), Gaps = 74/605 (12%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 +EE + ++I++ Y+ ++D +D+ RL + F S + Sbjct: 61 TDPREEHRLIAEEIEEARWRYYVLDSPTIDDADFDRRMRRLEALEEEFPELRTPDSPTQT 120 Query: 82 VMMPPLNGAVMHP--VAHTGVRKMVDKNALSLWMRE-------RSDLWVQPKVDGVAVTL 132 V HP + + W L + KVDG+A+ L Sbjct: 121 VGGAVSTDFTSHPHLRRMESLDNAFSVEEVEAWYARLRRDGVEDPALLCELKVDGLAINL 180 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIFLQREG 187 +Y +G+L +A++RG+G GED T V I++VP ++G A ++GE+FL E Sbjct: 181 LYEEGRLVRALTRGDGTTGEDVTSNVKTITSVPHRLTGTDEFPVPALVEVRGEVFLPVEA 240 Query: 188 HIQQQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQLMSD 234 + N R AG + ++D T + LG+ + PQ S Sbjct: 241 FERLNESLLEAGKAPFANPRNSAAGSLRQKDPRITASRALGMVCHGIGERRGFEPQAQSH 300 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAEL-PFVTDGVVVRAAK--EPES 289 LA G + R V V + + P+ DGVVV+ Sbjct: 301 AYDALAAWGLPTSDQ-VRVVSTLKGVEGYIENAGARRHTIVPYEIDGVVVKVDDVALQRR 359 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A+KY P A++ I+ VG++G+++ A + P + V+ + Sbjct: 360 LGSTSRAPRWAIAFKYPPEEVNAKLLEIRVNVGRTGRVTPYAVMEPTKVAGSTVENATLH 419 Query: 350 SVRRWQEWDIA------PGDQILVSLAGQGIPRIDDVVWRGAER--TKPTPPENRFNSL- 400 + + D+ PGD +++ AG IP I V PP + Sbjct: 420 NFYEVERKDVRPGGPGDPGDTVILRKAGDVIPEILGPVLALRPEGLQPWVPPTTCPSCGT 479 Query: 401 ----------TCYFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + C Q R+ ++ ++ ++G+G AL + Sbjct: 480 PLVEQKEGDKDRRCPNHEKCPGQLRERVFFVASRNAFDIEGLGYEAAVALLDAEVIANEG 539 Query: 450 SWLLLTPEQLQNTP--GIAKSK----------SAQLWHQFNLARKQPFTRWVMAMGIPLT 497 L L P A K +L + A++ P R ++A+ I Sbjct: 540 DVFDLDAAALLRAPLFTRAPKKDEDGPQLSANGQRLLDNLDKAKQVPLWRVLVALSIRHV 599 Query: 498 R---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQ 554 A++ S + + +TE+ G G A VIEW + ++ Sbjct: 600 GPKAGRALATEFGSMAAIRAATEEQLAAAEGVGPTIAEAVIEWFKEPWHVEIVDKWERAG 659 Query: 555 ITGFE 559 +T + Sbjct: 660 VTMAD 664 >UniRef50_Q89B02 DNA ligase n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=DNLJ_BUCBP Length = 672 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 117/579 (20%), Positives = 230/579 (39%), Gaps = 55/579 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC-------FGSEPR 80 + I +LQ +I+ Y ++ D YD L L + ++ S + Sbjct: 2 KDIKNYILKLQDEIRYHAYLYHTLNSPKISDEKYDFLVIELQRLEKKCKYSVRFKDSPTQ 61 Query: 81 DVMMP--PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAV 130 V P H + + KN + ++ + + K DGVA+ Sbjct: 62 SVGSENLPEFKKFSHITPMLSLNNVFIKNDFLKFYKKIVNNITVEKIFFCSELKFDGVAI 121 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGH 188 L+Y +G L +A++RGNG +GED T V++IS+VP+ + G ++GEIF+ + Sbjct: 122 NLIYINGLLFRAVTRGNGYEGEDVTSNVNMISSVPKKLIGIDIPETLEVRGEIFMLKSDF 181 Query: 189 IQQQ--------MGGINARAKVAGLMMRQDDSDT-LNSLGVFVWA-----WPDGPQLMSD 234 + N+R +G + ++ T L SL + + + + Sbjct: 182 KKLNVRLTKFKKKLFSNSRNAASGSLRHKNAKVTELRSLTFYCYGCGYCSYENFTDSHFL 241 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPESR 290 RLK+L + GF ++ Y + DE+ R N + L F DG+V++ +S Sbjct: 242 RLKKLKSWGFPISD-YNFLHSSYDEILRFYNFIQNERYFLNFNIDGIVIKVDSICLQKSL 300 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 W VA+K+ ++ + I + VG++G I+ VA + P+ + +++V++ + Sbjct: 301 STTSKAPRWAVAYKFSDKIKITTIMNILYQVGRTGVITPVAQVTPIYISGVLIKKVSLHN 360 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDV-----VWRGAERTKPTPPENRFNSL----- 400 + ++ GD + + +G IP I +V + R + + P + L Sbjct: 361 FNEIRRLNLNIGDSVFIKRSGDVIPHIIEVASKCKLQRNEDISIPKFCPECGSKLKVDSF 420 Query: 401 ----TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP 456 A C QF L + +K+ L + G+G L + L Sbjct: 421 SNIKIRCMAGLKCLSQFKKLLHYFCSKKGLNILGLGPKIIDKLVDLGYVSDLSDIFDLNV 480 Query: 457 EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLL 513 L I KS + N ++ F++++ ++GI A ++ + + + Sbjct: 481 SLLTKVENIGIIKSQNIIRSINNSKNVSFSKFLCSLGIFEVGSIVARSISNYFFTLDKFM 540 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 S+++ + + G G A + + + K + L+ Sbjct: 541 NSSKEEFLLINGIGVNIADNLYNFINDEFNKNIIFKLSK 579 >UniRef50_B2UL69 DNA ligase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=DNLJ_AKKM8 Length = 794 Score = 553 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 134/625 (21%), Positives = 231/625 (36%), Gaps = 92/625 (14%) Query: 17 SVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 + P + A I L+ ++++ + Y+++ + E+ D YD L L + ++ Sbjct: 32 NAGTDHPGNAEDPAHRRIDYLRSELRRHNRLYYEQAEPEISDAEYDALFLELEKLEKAHP 91 Query: 77 ------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVD-------KNALSLWMR------- 114 S R V PL G + H V + + + L+ + Sbjct: 92 ELSDPDSPTRRVGGAPLQGFNQIRHAVPMLSIDDIFEQRDAPVPDEELAEFYHKLSRALQ 151 Query: 115 -ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-GPL 172 E + V+PK+DGVA++++YR+GKL A +RG+G G+D T V I +VP T+ G Sbjct: 152 TENVPVSVEPKIDGVALSIMYRNGKLAYAATRGDGDVGDDVTANVRTIRSVPLTLPPGAP 211 Query: 173 ANSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVW 223 ++GE+F+ E + N R AG + + D L Sbjct: 212 PVLEVRGEVFMPNEAFAKLNEERDADGLPAFANPRNATAGTLKQLDPRQVAARPLAFLAH 271 Query: 224 AWP--DGPQL--MSDRLKELATAGFTLTQ--TYTRAVKNADEVARVRNEWWKAELPFVTD 277 +GP+L D L G + YT ++++ + R + + LP+ TD Sbjct: 272 GLGAYEGPELRDAKDFWNMLRHCGIPCNEPVYYTDSLESTRQAVRDIDR-LRHTLPYGTD 330 Query: 278 GVVVRAAKEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 G V++ + E+ W A+K+ P + + I VG++G ++ VA L P Sbjct: 331 GAVIKISSTATREALGATARAPRWAAAYKFPPEQKETTLLNIVVQVGRTGVLTPVAELQP 390 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA---------- 385 V+L V R + + D+ GD +LV AG+ IP + V Sbjct: 391 VLLSGSTVARATLHNQDEIDRKDVRIGDTVLVEKAGEIIPAVLKVNLSKRPQDARPYSIL 450 Query: 386 ERTKPTPPENR------FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRAL 439 E TK P + + C Q ++ + ++ L ++ IG + AL Sbjct: 451 EATKGLCPACGNPIMKEEGKVAWRCTNFTCPAQAVTGITHFCSRSALDVESIGSSVAEAL 510 Query: 440 HQTHRFEHIFSWLLLTPEQLQNT--------PGIAKSKSAQLWHQFNLARKQPFTRWVMA 491 + L P+QL N + + + AR P RW++A Sbjct: 511 RSSGLASSALDLFSLMPDQLANLNLGTPEEPRRYGEKNARKALDALQNARGLPLERWLIA 570 Query: 492 MGIPLTR---AALNASDERSWSQLLFSTE-QFWQQLPGT--------------------G 527 GIPL A A + S + +L G Sbjct: 571 FGIPLVGEVVAKALADTHPDLKHVADSPYLRDIVRLDELVEQAAKTNPNTRENKKAVKEG 630 Query: 528 SGRARQVIEWKENAQIKKLGSWLAA 552 + A V E + ++ + L A Sbjct: 631 ALSAEAVQE--RHQELMEEIDRLTA 653 >UniRef50_D1BCZ9 DNA ligase n=3 Tax=Micrococcineae RepID=D1BCZ9_SANKS Length = 871 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 103/618 (16%), Positives = 195/618 (31%), Gaps = 107/618 (17%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 + A+ + L + I+ Y+ V D YD L L + S + Sbjct: 42 SAARTRWAELAETIEAHQFAYYVRDAPTVSDAEYDTLLRELGDIEEAHPQLRTPDSPTQR 101 Query: 82 VMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVT 131 V AV H + + L W + K+DG+A+ Sbjct: 102 VGGTFSTDFAAVDHREQMLSLDNAFNAEDLDAWAERVHREIGTSQVHYLCEVKIDGLAIA 161 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS----GPLANSTLQGEIFLQREG 187 L+Y G+L +A +RG+G GED T V I +P+ + ++GE+F+ + Sbjct: 162 LLYEKGRLVRAATRGDGRTGEDVTLNVLTIEGIPKALDASVREVPDLIEIRGEVFMLVDQ 221 Query: 188 HIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP---------DGP 229 N R AG + +++ T L ++ Sbjct: 222 FAALNEAQVAAGKPPFANPRNAAAGSLRQKNPKITAGRPLRMYAHGVGALHWEAGTPSEL 281 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP 287 + SD G ++ + R V+ V + + + + ++ DG+VV+ + Sbjct: 282 RRQSDAYDYFRAWGVPVSD-HNRVVEGMPGVQEMIDYYGDHRHDIEHELDGIVVKVDELA 340 Query: 288 ES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 W +A+KY P + I VG++G+++ + PV++ V Sbjct: 341 LQRQLGATSRAPRWAIAYKYPPEEVNTTLLDILVNVGRTGRVTPFGMMEPVLVAGSTVSM 400 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE--RTKPTPPENRFNS---- 399 + + + + GD +++ AG IP I V + + P + Sbjct: 401 ATLHNGSEVRRKGVLIGDTVVLRKAGDVIPEIVGPVVDLRDGSEREFVMPTECPSCGTTL 460 Query: 400 -------LTCYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH-------- 443 + + C Q R+ L + ++ +G AL Sbjct: 461 APAKEGDVDIRCPNQRSCPSQLRERVFHLAGRGAFDIEAMGWEAAIALVDPEHNRPESAD 520 Query: 444 ---------RFEHIFSWLLLTPEQLQNTPGIAKSKSA----------------------- 471 E + + L + + K A Sbjct: 521 AEGVPVQVPVLETEAGFFDFEVDALADVLVWREKKKAGVGTGVWEQVPFFWTKATAKTPS 580 Query: 472 -------QLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQ 521 + + + A+ +P R ++A+ I A A+ S ++ +TE+ Sbjct: 581 KPSATTVKFFEEREKAKARPLWRVLVALSIRHVGPTAARALATAFESVEAIMAATEEELA 640 Query: 522 QLPGTGSGRARQVIEWKE 539 G G AR V W Sbjct: 641 ATEGVGPTIARAVRIWFN 658 >UniRef50_B0T1N5 DNA ligase n=7 Tax=Alphaproteobacteria RepID=DNLJ_CAUSK Length = 792 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 112/599 (18%), Positives = 196/599 (32%), Gaps = 86/599 (14%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 + A+A EE+ RL + D Y ++ + D YD L R + F S Sbjct: 8 DLTEAQAAEELERLADDLAAHDLRYHQQDAPTISDAEYDALKRRNLDIEDRFPHLVRDNS 67 Query: 78 EPRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW----------VQPKV 125 V V H V + + + + +PK+ Sbjct: 68 PSMRVGAARAEQFSPVEHGVPMLSLDNAFSNDEATEFDARIRRFLRLTNEPVFYTAEPKI 127 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-------LANSTLQ 178 DG++ +L Y G L + +RG+G GED T + I+ +P + G ++ Sbjct: 128 DGLSASLRYEKGVLVQGATRGDGRMGEDVTANLRTIADIPHRLRGGDPQGGGWPDVIEIR 187 Query: 179 GEIFL--------QREGHIQQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP--- 226 GE+++ Q N R AG + + D + L F +AW Sbjct: 188 GEVYVELEAFAAFNAAALEAGQRTYANPRNFAAGSLRQIDPKISAQRPLRFFAYAWGLTS 247 Query: 227 -DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRA 283 + L +L GF T V++A + + E + +L F DGVV + Sbjct: 248 EGFAATQWEALGKLRDWGFVTTAPPAERVQDAQGLLDIYAKFEVERPKLAFDIDGVVYKV 307 Query: 284 AKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + ++ W +A K+ ++AI VG++G I+ VA L PV + Sbjct: 308 DDLEQQRRLGFVSRSPRWAIARKFPAQQARTILEAIDLQVGRTGAITPVARLKPVTVGGV 367 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE--RTKPTPPENRF-- 397 V + + D+ GD +++ AG IP+I V P + Sbjct: 368 SVTNATLHNADEIARKDVRIGDTVILQRAGDVIPQIVGPVLEERPAGAVPFEFPTHCPCH 427 Query: 398 ---------------NSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 + C Q I L +++ ++G+GE A + Sbjct: 428 LETPLVRESTAAGAETVVRRCSGEFACPFQRIEHLRHFVSRRAFDIEGLGEKQLAAFFEE 487 Query: 443 HRFEHIFSWLLL-----TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLT 497 + L +L+ G ++ A L R R + +G+ Sbjct: 488 GWIKEPADIFKLARDEAKLAELRERDGYGETSVANLVKGIEARRTIGLDRVIYGLGMRDI 547 Query: 498 RAAL---NASDERS------WSQLLFSTEQ-----------FWQQLPGTGSGRARQVIE 536 A + S + L + E+ PG G +++E Sbjct: 548 GETTSTVLARNFASPKGKGGFEDLQAAAERAAGQLPGAVYLELAGAPGVGPKARDELVE 606 Score = 52.9 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 14/116 (12%), Positives = 28/116 (24%), Gaps = 20/116 (17%) Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFT------RWVMAMGIPL---TRAALNASDERS 508 +L PG+ +L K + +P A Sbjct: 589 ELAGAPGVGPKARDELVEAGKGGLKADPWPEADSLEVKIGHAVPKLSKPARVALAERYGD 648 Query: 509 WSQLLFS-----------TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 W + + G G A+ + + A ++ + L A+ Sbjct: 649 WDTFAQALAQAGQGAPGEDYLQLAAIDGIGPVAAQSIARFFAEAHNREKVANLIAE 704 >UniRef50_Q7VRU2 DNA ligase n=1 Tax=Candidatus Blochmannia floridanus RepID=DNLJ_BLOFL Length = 594 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 113/591 (19%), Positives = 226/591 (38%), Gaps = 64/591 (10%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNG 89 + + L++++ + Y+ + +S+V D YD L L Q + + Sbjct: 4 IKNRVQILRERLNYLEYLYYVKSESKVSDEEYDILLEELRQLEFKYPYLITKSSSTQSIS 63 Query: 90 AV--------MHPVAHTGVRKMVDKNALSLWMRER--------------SDLWVQPKVDG 127 V H + + DK+ L L+ + + K+DG Sbjct: 64 NVCDNSLNRIRHQKPMLSLNSIRDKSQLLLFDKRIKYKLSNHYNINQNLIVYCCELKIDG 123 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-----LANSTLQGEIF 182 VA++++Y+ GKL A +RG+G GE+ T+ V+ I ++P+ + ++GEIF Sbjct: 124 VALSILYKQGKLVHAATRGDGKIGENVTKNVNAIDSIPKNLKKNNNEILPDLLEIRGEIF 183 Query: 183 LQREGHIQQQMG--------GINARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDG----- 228 + + + NAR +G + + D T L SL + Sbjct: 184 ISKLSFSKLNQEMLSSGKKVFSNARNAASGSLRQLDPHVTELRSLVFCCYGISYYAGLKQ 243 Query: 229 -PQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK 285 P RLK G ++ Y + V D V N ++EL + DG+V++ Sbjct: 244 LPNSHWGRLKLCNRWGLSIN-NYIQIVSGIDPVLEYYNYVRKIRSELEYQIDGIVIKIDN 302 Query: 286 --EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 + W VA+K+ ++ ++ + F VG++G I+ +A + PV++ + + Sbjct: 303 CIYQDQLGCGFRAPNWAVAYKFPAELKLTKLNDVVFKVGRTGLITPIAYINPVVIGNVII 362 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA--ERTKPTPPENRFNS-- 399 ++VN+ +V + ++ GD ++V +G IP+I ++ PE + Sbjct: 363 KKVNMHNVNEVKRLNLMIGDTVIVQRSGDVIPKILKIILENRVDNAKFIKIPEFCPSCGS 422 Query: 400 ----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIF 449 + A C Q S L +++ + + G+G L Sbjct: 423 ILKVEDNKSSVLRCLAKLTCLAQRKSALKHFASRKAMNIQGMGSRVINQLVDKGLICTPV 482 Query: 450 SWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDE 506 + L+ E+L + + +L +A++ + ++ A+GIP ++ A Sbjct: 483 DFFSLSKEKLLCLDRYGEKSAERLLQSILIAKEITLSAFIYALGIPGVGESVSNKLAYMY 542 Query: 507 RSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 R+ L+ + Q + QL G A + + + L + Sbjct: 543 RTIENLMNADLQSFLQLKFIGKIAAMNIYSFLHQSDNYNNIQGLIRSNLIF 593 >UniRef50_C2BDK0 DNA ligase (NAD(+)) n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BDK0_9FIRM Length = 667 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 113/578 (19%), Positives = 216/578 (37%), Gaps = 51/578 (8%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-----GSEPRDVMMPP 86 +E+ ++ ++I + D Y+ K V DG YD+L +L + Q+ S V Sbjct: 5 DELKKIIERINELDYHYYTLDKPLVSDGEYDKLYNQLIKLQKNLAYVPENSPTNRVGGQI 64 Query: 87 LNGAVMH--PVAHTGVRKMVDKNALSLWMR-----------------ERSDLWVQPKVDG 127 L+ H K + + W+ + ++ K DG Sbjct: 65 LDKFEKHYHLTRLLSQDKAQSYDEIKEWIERCKRLKEAYESTSGERLPNLEFVMEYKFDG 124 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 + + L Y DG L A +RGNG+ GE + I ++P T+ + +QGE + Sbjct: 125 LTINLTYEDGILKTAATRGNGIVGEQVKAQAETIRSIPFTIKEK-SLLEIQGEALMPLSE 183 Query: 188 HIQQQMG----GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP---DGPQLMSDRLKEL 239 + NAR AG + D +T L + +A P + + L L Sbjct: 184 LDRYNKENETQLKNARNAAAGAIRNLDTKETAKRHLTAYFYAVPTNSINFKNEEEMLSFL 243 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAK--EPESRHWLPG 295 + + + V + DE+ + L +TDGVV++ E Sbjct: 244 KEMKLNVHPYH-KKVTSLDEIINELERIKEERKTLDVLTDGVVIKINDKKTQEVLGVTEK 302 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A+K++P ++ + + VG++GK++ A L PV V R + + + Sbjct: 303 FPRWSIAFKFEPEEFTTKLLDVIWNVGRTGKVTPSAILEPVDFSGVTVSRATLNNYDDIE 362 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT----KPTPPENR-----FNSLTCYFAS 406 + G + + + IP I VV T KPT + + Sbjct: 363 RKKVKIGSDVFIRRSNDVIPEILGVVDENQPGTIKIEKPTHCPYCHSELIQEKVHIVCPN 422 Query: 407 D-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI 465 C Q ++R+ ++ + ++G+ E L + + I+ LT ++L Sbjct: 423 SISCTPQLLARMEHYASRNAMDIEGLSEKTIGQLIEELSIKEIYDIYDLTYDELIKLERF 482 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQ 522 K+ L + ++ + ++ A+GIP A A+ +S+ +L +T + Sbjct: 483 GHKKAKNLLASIDNSKNRDLDAFIYAIGIPNVGERTARDLANKFKSFDKLRNATVDELIE 542 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + G ++E+ + I + L ++ I P Sbjct: 543 IDDIGEITGENIVEFFHDKNIVESIDILLSKGINLNNP 580 >UniRef50_D0JB06 DNA ligase n=2 Tax=Blattabacterium RepID=D0JB06_BLASB Length = 681 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 106/569 (18%), Positives = 229/569 (40%), Gaps = 46/569 (8%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLNG 89 +L++++ +++ Y+ S++ D +D+ L ++ + S + Sbjct: 27 QLRKELSKYNYQYYNFDTSDISDFHFDKKLEELFFLEKKYPEFYDPTSPTIKIGAEIHEP 86 Query: 90 AVM--HPVAHTGVRKMVDKNALSLWMR------ERSDLWVQPKVDGVAVTLVYRDGKLNK 141 + + H ++K K L +W + + K DGV++ L+Y++G L Sbjct: 87 STVFYHKYKMYSLQKTYSKKELIIWKKKISKSIHTFSFVCELKYDGVSINLIYKNGFLTN 146 Query: 142 AISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQM------ 193 A +RGNG KGED T+ + I VP + G A ++GE+FL + I+ Sbjct: 147 AGTRGNGEKGEDVTENIKTIKHVPLKLRGNNYPAYLEIRGEVFLTTKNFIEINKKRIKSG 206 Query: 194 --GGINARAKVAGLMMRQDDSDTLNSLGVF-VWAWPD---GPQLMSDRLKELATAGFTLT 247 N R +G + QD + + LK + GF + Sbjct: 207 KTPYANPRNTASGTLKIQDRKKVRQRNLFCIAFHVVGKNLPFDTQYESLKHIKNWGFQIP 266 Query: 248 QTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAW 303 +T R KN +EV + W WK +LP+ DG+V++ + + + W +A+ Sbjct: 267 ET-ARFCKNMEEVFHFIDFWNLWKDKLPYQIDGIVIKVNEYQKQSLLGFTNKYPRWAIAY 325 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 K++ ++ ++ F VG++G ++ VA++ P+++ ++RV + + Q+ I GD Sbjct: 326 KFRQKLSETKLLSLTFQVGRTGIVTPVANVVPILISGTIIKRVALYNDSFIQKMGIYHGD 385 Query: 364 QILVSLAGQGIPRIDDV-VWRGAERTKPTPP-ENRFNSLTC--------YFASDVCQEQF 413 +L+ G IP++ + + + + + P + + + Y + C Q Sbjct: 386 TLLLEKGGNIIPKVTRINIKKRSSQAFPVFFLKKCPSCNSVLTKNNELFYCTNQNCFSQR 445 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQL 473 I ++ + + + + IG + L++ ++ L E+L G+ + + + Sbjct: 446 IEKIRHFVSVKAMNIQKIGNEMIKKLYKKGFLYSFYNLYELKKEELLQIDGVKEKLADSI 505 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTRA---ALNASDERSWSQLLFSTEQFWQQLPGTGSGR 530 + +++ PF+R + A+GI + L+ + + G G Sbjct: 506 INNIKKSKENPFSRVLYALGIRHVGEDISKKLTKQFLDINSLMHANYDHLISISGIGKKI 565 Query: 531 ARQVIEWKENAQIKKLGSWLAAQQITGFE 559 +I + + + L + + Sbjct: 566 TESIITYFSIYENRHAVQMLIKYGLHFSK 594 >UniRef50_C8PJ57 DNA ligase n=3 Tax=Campylobacter RepID=C8PJ57_9PROT Length = 668 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 108/560 (19%), Positives = 218/560 (38%), Gaps = 43/560 (7%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 +E + W Y+ + + D YD+L ++ +++ S R + Sbjct: 4 DEYRSAVDTLNAWARAYYTDDRPIASDEEYDELYSQAEKFEEQNPELALSYSPTRRIGGA 63 Query: 86 PLNG--AVMHPVAHTGVRKMVDKNALSLWM----RERSDLWVQPKVDGVAVTLVYRDGKL 139 G + H + + D L W+ + + +V+PK DG ++ L Y G L Sbjct: 64 ISEGFSKLAHGAQMWSMEDIFDDADLLAWLARGEKSGAQFYVEPKFDGASLNLTYEGGVL 123 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG----- 194 A +RG+GL GED TQ I +VP + ++GE + + Sbjct: 124 ISAATRGDGLIGEDVTQNARAIKSVPLQIPYA-GRIEIRGETLIAKSDFDALNDERAANG 182 Query: 195 ---GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD---GPQLMSDRLKELATAGFTLT 247 N R AG + + D + L W + L S ++ + + GF L Sbjct: 183 ESLFSNPRNAAAGSLRQLDSAIVAKRKLKFIPWGVGEHSLSFALHSQIMEFVRSLGF-LR 241 Query: 248 QTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPE--SRHWLPGQAEWLVAW 303 + R K+A E+ +A + DG+V+R + + + ++VA+ Sbjct: 242 DEFCRICKSASEIRAAYEALHSMRASKDLMLDGMVIRVNELSKCAQMGYTVKFPRFMVAY 301 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 K+ V +V ++ I VG++G ++ VA + V +D V + + + D Sbjct: 302 KFPAVEKVTRLREINLQVGRTGAVTPVAVVYSVNIDGANVSNATLHNFDEIARLGLMKND 361 Query: 364 QILVSLAGQGIPRIDDVVWRGAE--RTKPTPPENRFNS--------LTCYFASDVCQEQF 413 + + +G IP+I V + + +++ + P+ + C+ + Sbjct: 362 FVGIIRSGDVIPKITSVYKQRRDGTQSEISRPDRCPVCGEKLLDEGALIKCQNLDCKARV 421 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQL 473 I L++ +K+ + ++G+ +A L ++ + I L + L + G A K + L Sbjct: 422 IGSLIYFCSKKCMNIEGLSDATITQLFESGKISKIGDIYALGAQDLADLEGFADKKISNL 481 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSW-SQLLFSTEQFWQQLPGTGSGRAR 532 N ++ P R++ ++GI ++ L ++E +L G G AR Sbjct: 482 LGAINASKNAPLERFIASLGIEHIGEVAARKIAAAFGQDWLDASEDEILRLEGFGEAMAR 541 Query: 533 QVIEWKENAQIKKLGSWLAA 552 + E+ + ++ L+ Sbjct: 542 SLAEFCKI--NREKILNLSE 559 >UniRef50_B9L8R4 DNA ligase n=3 Tax=Epsilonproteobacteria RepID=DNLJ_NAUPA Length = 656 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 105/563 (18%), Positives = 222/563 (39%), Gaps = 47/563 (8%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPL 87 + +K+W Y+ V D YD+L + ++++ S + V L Sbjct: 8 YKKAVDTLKKWAYYYYVLDNPLVTDEEYDKLYHEVEEYEKKHPDKIDPTSPTQRVGDVVL 67 Query: 88 NG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYRDG 137 G H + + ++ W+ +++PK DG ++ L+Y +G Sbjct: 68 EGFEKAKHLSRMWSMEDVFNEKDFLDWVGRVKRILGHENFSFYIEPKFDGASLNLIYENG 127 Query: 138 KLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG--- 194 KL +A +RG+G GED T I+++P + + ++GE+ ++++ + Sbjct: 128 KLIRAETRGDGEIGEDVTLNAKTINSIPLEIKEK-SLIEIRGEVVIKKDDFDKLNEERLK 186 Query: 195 -----GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGP---QLMSDRLKELATAGFT 245 N R AG + + D T L + W + S+ + + + GF Sbjct: 187 NGEPTFANPRNAAAGSLRQLDPKITAKRPLIFYPWGVGVNSLNYERYSELMDYIYSLGFK 246 Query: 246 LTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPE--SRHWLPGQAEWLV 301 K+ V + +E+ + + DG+VV+ + + W+V Sbjct: 247 EPPK-RGVCKDIPCVEKKYDEFVKLRDSFEVMLDGMVVKIDEIKYHDILGYTQKYPRWMV 305 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 A+K+ + + ++ + VG++G ++ VA L PV + V+R + + + DI Sbjct: 306 AYKFPAIEKETIIEDVIVQVGRTGVLTPVAVLKPVEIGGVIVERATLHNFDEIERMDIRI 365 Query: 362 GDQILVSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNSLT--------CYFASDVCQE 411 GD ++V +G IP+I V+ R + P + + C Sbjct: 366 GDHVIVIRSGDVIPKITKVLTWKRKGDEKPIPRPTHCPVCGAEVLDEGALIKCQNLSCPA 425 Query: 412 QFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSA 471 + ++ +++ +K L ++G+GE+ + L++ + + L E L+ P A+ K+ Sbjct: 426 RVVNTIIYFASKNCLDIEGLGESVAKLLYEHGLVKDVTDLFELKVEDLEKLPLFARKKAE 485 Query: 472 QLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWS-QLLFSTEQFWQQLPGTGSGR 530 L + R+V A+GI + + + + ++++ G G Sbjct: 486 NLVNAIKSKVGVECWRFVNALGIEHIGEVASKKICEKFGVEFYKHAPEEFEEIEGFGPEM 545 Query: 531 ARQVIEWKE--NAQIKKLGSWLA 551 + + E+ +I+KL L Sbjct: 546 VKSIAEYIRVNKEKIEKLIEILK 568 >UniRef50_C3CUT6 DNA ligase, NAD-dependent n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CUT6_BACTU Length = 669 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 102/574 (17%), Positives = 220/574 (38%), Gaps = 48/574 (8%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVM 83 +++I +L++++ + D Y EG + D YDQ+ L + S + + Sbjct: 2 IEQKIKQLREEVMKHDLLY-DEGTPIITDSEYDQMYYELVSLEEKHPEFADENSPTKRIY 60 Query: 84 MPPLNG--AVMHPVAHTGVRKMVDKNALSLWM-RERSDLWVQPKVDGVAVTLVYRDGKLN 140 ++ + H K + + + + ++ K DG+ + L Y +G Sbjct: 61 SVVVDSLKKIKHSTPMLSQDKGHTEEDIVKFANKSDDEIIAGDKEDGLTIVLKYNNGIYY 120 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ--MGGINA 198 +A +RG+G GED T V I+ +P+ +S ++ E + + + Sbjct: 121 EASTRGDGYIGEDVTHTVRTITNLPKKISFK-GYLEVRAESVIPFSEFERINVDGKYKSP 179 Query: 199 RAKVAGLMMRQDDSDTLNS-LGVFVWAW----PDGPQLMSDRLKELATAGFTLTQT--YT 251 R V+G + + + L + + + +++L+ L GF + + Sbjct: 180 RNLVSGSVRTLNANIAKERGLSIIAFDLVKAEGITFEKDTEQLEFLKEQGFNVVPYKVFK 239 Query: 252 RAVKNADEVARV---RNEWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWKYQ 306 + E+ + N+ + +P + DG+V++ ES + W A+K+ Sbjct: 240 NTPEGIKELIQYCLTYNKEVRPTIPHMIDGLVLKFNNLAVRESLGYTSKFPRWGFAFKFD 299 Query: 307 PVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQIL 366 + ++ I VGKSG+I+ PV +D +Q+ ++ + +E DI GD I+ Sbjct: 300 SLDATTKLLNIVETVGKSGQITPNGIFEPVEIDGVTIQKASLANYDNIKERDIRIGDTIV 359 Query: 367 VSLAGQGIPRIDDVVWRGAERT--KPTPPENRFNS----------LTCYFASDVCQEQFI 414 V+ A IP+I V + T + PP + + + C Q Sbjct: 360 VARANDVIPQIVSAVTELRDGTEKEILPPTCCPVCKGEVVKEEDNVHYFCINSTCSAQQE 419 Query: 415 SRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTPGIAKSKSAQ 472 L ++ + +DG+G ++ I L ++L G + K + Sbjct: 420 RILKHFVSRNAMNIDGLGAKTVETFYEKGILSSISDIYTLKDNLDKLSVLRGFGEKKIQK 479 Query: 473 LWHQFNLARKQPFTRWVMAMGIPLTRA---ALNASDERSWSQLLFSTEQ------FWQQL 523 + ++ P ++++ A+ IP + A ++ L+ ++ ++ Sbjct: 480 MLSGIEESKHVPLSKFLYALAIPNVGSSTGKDIAKKFKTMRHLIELSKDPVVLKTELMKI 539 Query: 524 PGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 G G A ++ + E + +L +L + T Sbjct: 540 DGIGETVASSMVSYFEESHNIELIEFLYSIGFTM 573 >UniRef50_Q04XH0 DNA ligase n=6 Tax=Leptospira RepID=DNLJ_LEPBL Length = 681 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 106/579 (18%), Positives = 229/579 (39%), Gaps = 51/579 (8%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 S A++ I++L +I+ Y+ + + E+ D +DQL RL + F S Sbjct: 11 TLSEKEAKKVIAKLADEIRHHQYLYYVKNQPEISDFDFDQLFKRLRDLEEEFPQFKDLNS 70 Query: 78 EPRDVMMP--PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD---LWVQPKVDGVAVTL 132 V H + + + + L W+ + V+ K+DG ++ L Sbjct: 71 PTLVVGSDLDKDFEKFQHKLPVLSLINTYNDDELLDWVNKTDPDGLYSVEWKIDGASIVL 130 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 Y +G L ++RG+G G+D T + + +P + P+ L+GE+F+ + + Sbjct: 131 YYENGMLKNGVTRGSGGIGDDVTDNIRTVRNIPLRLPEPIT-VYLRGEVFMTFKDFEEFN 189 Query: 193 M----GGINARAKVAGLMMRQDDSDTL-NSLGVFVW-----AWPDGPQLMSDRLKELATA 242 N R AG + +++ +DT L +F + + + L +L Sbjct: 190 ELSSGKYANPRNLSAGSIKQKNSADTAKRPLRIFTYDATFPGFTKKFKTHQQILSKLEKL 249 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVRAAKEPES--RHWLPGQAE 298 F + N ++A ++ K + L F TDG+V++ + + + Sbjct: 250 TFPVPPDT--VFVNGSKIAETIKDFKKKKDTLGFPTDGLVIKLNDISKRDAQGYTSHSPR 307 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W A+K+ + + + + I +AVG++GKI+ + PV L V + + E Sbjct: 308 WARAYKFDAIMKESRIVDITYAVGRTGKITPRVEIEPVNLAGTTVTFATLHNQDYIDELG 367 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS----------LTCYFASDV 408 + G + V+ G+ IP +++V+ G + P+ + + + + Sbjct: 368 VGIGAIVRVAKRGEIIPAVEEVITPGKD--VFKIPDYCPSCKTKTIKKENLVDLFCPNPD 425 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIA 466 C ++ + +++ ++ + ++G+G+ L+ I L E+L G Sbjct: 426 CPDRVKNGIIFYCQRKQMDIEGLGDKQIEFLYDHGYIRSIADLYDLKDQKEKLIEEEGFG 485 Query: 467 KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR----AALNASDERSWSQLLFSTEQF--- 519 + A +++ ++++ F + ++G+P L S ++L + Sbjct: 486 EKSLAIIFNGIEHSKQKDFRFLLPSIGLPELGHKVTELLIEHGIDSIDEILSIAKDKKRI 545 Query: 520 --WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 ++PG G + E + +I KL + L + Sbjct: 546 SSLLEIPGIGPSTIKAFEENFSDKRILKLIARLKNAGLK 584 >UniRef50_A6TFP6 DNA ligase B n=110 Tax=cellular organisms RepID=LIGB_KLEP7 Length = 564 Score = 546 bits (1408), Expect = e-154, Method: Composition-based stats. Identities = 296/551 (53%), Positives = 393/551 (71%), Gaps = 1/551 (0%) Query: 9 IGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARL 68 + + + +S A CP W AR ++E SRL QQI W + YW++G S V D VYDQL+ RL Sbjct: 14 LALGMFSASALATCPDWPLARGRQETSRLHQQIVAWKEAYWRQGASGVSDDVYDQLTLRL 73 Query: 69 TQWQRCFGSEPR-DVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDG 127 QW++CF D +PP G HPVAHTGVRK+ D+++++ WM+ +SDLW+QPKVDG Sbjct: 74 AQWRQCFPGATPEDDDLPPPTGDARHPVAHTGVRKLADEDSVARWMKNKSDLWIQPKVDG 133 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 VAVTLVYR G+L +AISRG+GL+GE WT + I A+ + ++G LA+S LQGE+FL+R+G Sbjct: 134 VAVTLVYRQGRLVQAISRGDGLRGEAWTARARQIPALAKVMTGELADSVLQGELFLRRDG 193 Query: 188 HIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLT 247 H+QQQ GG+NARAKVAGLMMR D + L+ L VF+WAWPDGP M R + LA AGF + Sbjct: 194 HVQQQTGGMNARAKVAGLMMRADAAAALSQLDVFIWAWPDGPSDMRRRQQLLAQAGFKYS 253 Query: 248 QTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQP 307 YT V ++VA+ R W+++ LPFV+DGV+VR +EP R W PG+ EWL AWKY P Sbjct: 254 GQYTHPVSRIEQVAQWRQRWYRSPLPFVSDGVIVREGREPPGRVWSPGKGEWLAAWKYPP 313 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 ++V +V+AI+F++G+SG+++VVA L P LDDK+VQRVN+GSV RWQ DI GDQ+ + Sbjct: 314 ASRVMQVRAIRFSIGRSGRLNVVAELEPQRLDDKRVQRVNVGSVSRWQMLDIGVGDQLQI 373 Query: 368 SLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLG 427 SLAGQGIPR+D VVWR AER KPTPP +FN+LTCYFA+ C EQF+SRL+WL +K L Sbjct: 374 SLAGQGIPRVDAVVWRTAERHKPTPPPAKFNALTCYFATPECSEQFLSRLIWLSSKSALN 433 Query: 428 LDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTR 487 +DG+GE WR + Q + HIFSWL LT EQLQ PGI+ ++ LWHQF+L RK+PF R Sbjct: 434 VDGVGENLWRVIQQQNPMTHIFSWLALTVEQLQAVPGISAARGQHLWHQFDLVRKRPFIR 493 Query: 488 WVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLG 547 WV+AMGIP+ + AL + +W L +E W+ LPG G RARQ++ + + + L Sbjct: 494 WVLAMGIPVPQGALAQLESENWHLLAAKSEAQWRTLPGVGEIRARQLVAFLHHPDVVALA 553 Query: 548 SWLAAQQITGF 558 WL+ Q+I GF Sbjct: 554 QWLSGQRIPGF 564 >UniRef50_D0LK14 DNA ligase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LK14_HALO1 Length = 751 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 114/541 (21%), Positives = 213/541 (39%), Gaps = 53/541 (9%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 S A+ E L ++ D Y+ E + + D YD+L +L + S Sbjct: 1 MSDDTARAEYLGLVDELSDHDRRYYVEAEPIISDVEYDKLLKKLRAIEEEHPAWVVEWSP 60 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD-------------LWVQP 123 + V P++ V+ V + D++ L+ + + V+P Sbjct: 61 TQRVGHSPISSFPKVVREVPMLSLDNTYDESELADFHQRVLRGLGLSGDEAGAVNYVVEP 120 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 K+DG+ V L Y G +RG+G GED +Q + + +P + + + ++GE F+ Sbjct: 121 KIDGIGVELSYERGAFRLGTTRGDGRVGEDISQNLRTLRGLPLRLREEV-DLIVRGEAFM 179 Query: 184 QREGH--------IQQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDG---PQL 231 R + N R VAG + + D + V ++ G + Sbjct: 180 TRADFTALNEARAEAGEEPFKNPRNTVAGSLKQLDPRLVAERPMQVILYEVVGGERFARE 239 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES 289 + L L G ++ +R + + R W +AELPF DG+V++ + Sbjct: 240 HFEVLARLRELGLPTSEHNSR-ADSWAALKREVAAWAERRAELPFDVDGLVIKVNSFDQR 298 Query: 290 --RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 W +A+K+ ++ ++ VG++G ++ VA L PV + VQR + Sbjct: 299 DALGTTSKFPRWAIAYKFPAQQVTTVIEDLEVNVGRTGAVTPVAMLTPVEVSGTTVQRAS 358 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP--PENRFNS------ 399 + + + + I P D++L+ AG+ IP++ VV R +E+ P P + + Sbjct: 359 LHNWDQIERLGIGPKDRVLLEKAGEIIPQVIAVVERASEQVFPRPSTCPSCGHGLIQEPG 418 Query: 400 -LTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 + + C Q ++ L + + + +DG+GE +AL T ++ L+ E Sbjct: 419 RVALLCPNRLACPRQLLASLEFFAGRGQMNIDGLGEKVAQALLDTGLVSNVADLFALSKE 478 Query: 458 QLQNTPGIAKSKSAQLWHQFNLAR-KQPFTRWVMAMGIPLTR---AALNASDERSWSQLL 513 L + + L AR F+R + A+G+ A A+ LL Sbjct: 479 DLLTLERFGEQSAQNLVDAIARARDSATFSRLLAALGVAHIGGVAARAIAAHYPDMDALL 538 Query: 514 F 514 Sbjct: 539 A 539 Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 17/43 (39%) Query: 518 QFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 ++ G G A + + + + +++ L + + EP Sbjct: 625 DVLGEIEGVGRIMASSLESFLRDPEAREVLRLLRERGVNPREP 667 >UniRef50_B8ICE5 DNA ligase n=10 Tax=Alphaproteobacteria RepID=DNLJ_METNO Length = 829 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 116/641 (18%), Positives = 197/641 (30%), Gaps = 129/641 (20%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE----- 78 + A+A+E L +I + D Y E + D YD L RL + F Sbjct: 13 EMTAAQAREAHESLSAEIAEHDRRYHGEDAPIISDAEYDALRRRLEAIEERFPELAGTGA 72 Query: 79 -PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------VQPK 124 V + V H V + + ++ ++ +PK Sbjct: 73 ASVSVGAKASDKFAKVRHAVPMLSLGNAFAEEEITEFVERVRRFLGLPASEPLAFTAEPK 132 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIF 182 +DG++++L Y G+L A +RG+G GED T V I +P ++G ++GE++ Sbjct: 133 IDGLSLSLRYEGGRLVTAATRGDGEVGEDVTANVRTIREIPHELAGDDVPEICEVRGEVY 192 Query: 183 LQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD----GP 229 L N R AG + + D T L F +A + Sbjct: 193 LSHADFAAINARQEEAGRPLFANPRNAAAGSLRQLDPGITASRPLRFFAYAAGEMSSWPA 252 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEP 287 + S + G + T+ + E+ E +AEL + DGVV + + Sbjct: 253 ETQSGLIGAFRRFGLPVNPR-TKRCTSVAEMLAHYRAIETERAELGYDIDGVVYKVDEFA 311 Query: 288 ES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 ++ W +A K+ V ++AI+ VG++G ++ +A L PV + V Sbjct: 312 LQRRLGFVARAPRWALAHKFPAQRAVTVIEAIEINVGRTGSLNPLARLKPVTVGGVVVSN 371 Query: 346 VNIGSVRRWQ-------------------EW----------DIAPGDQILVSLAGQGIPR 376 + + + D+ GD ++V AG IP+ Sbjct: 372 ATLHNEDYIRGIDADGNTIRSGINIWDGFRLREDVDLRQGSDVRVGDTVVVLRAGDVIPK 431 Query: 377 IDDVVWRGAERT--KPTPPENRFNS-----------------LTCYFASDVCQEQFISRL 417 + DVV PE + +C Q RL Sbjct: 432 VADVVLERRPADAVPYAFPETCPACGSHAVRAYNPRTGKLDSVRRCTGGLICPAQGQERL 491 Query: 418 VWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL----------------------- 454 ++ ++G GE L + L Sbjct: 492 RHFVSRNAFDIEGFGETYIATLFEAGLVRQPADLFRLDFEPLKAAIVARRQALSAERALA 551 Query: 455 ---TPEQLQNTPGIAK--SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDE 506 TPE + P + L R P R++ A+GI A A Sbjct: 552 AGKTPEAKKAKPKANEEDKAIHNLLAAVEARRTIPLNRFIFALGIEQVGEATAKALAKHF 611 Query: 507 RSWSQLLF-----------STEQFWQQLPGTGSGRARQVIE 536 L+ LP G +++ Sbjct: 612 PDMPALMEGVRAAAACRPGPDWIELASLPRVGPTTRERLLA 652 Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 45/156 (28%), Gaps = 35/156 (22%) Query: 425 VLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE--------------QLQNTPGIAKSKS 470 LG++ +GEA +AL +H L +L + P + + Sbjct: 593 ALGIEQVGEATAKALA-----KHFPDMPALMEGVRAAAACRPGPDWIELASLPRVGPTTR 647 Query: 471 AQLWHQFNLARKQPFTRWVMAMGIPLTRAA--LNASDERSWSQLLFSTEQFWQQLPG--- 525 +L + LT A + L + E+ +Q PG Sbjct: 648 ERLLAAAEAGETDLLADGAVT---RLTSAQKEALLAAYGDRDGLRNAVERALRQKPGDAY 704 Query: 526 --------TGSGRARQVIEWKENAQIKKLGSWLAAQ 553 G+ +IE+ A + L + Sbjct: 705 RHLADDSEIGAVTTASLIEFFSEAHNVEAVEALLRE 740 >UniRef50_B3CVK1 DNA ligase n=20 Tax=Proteobacteria RepID=DNLJ_ORITI Length = 699 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 112/597 (18%), Positives = 215/597 (36%), Gaps = 70/597 (11%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + A++ + L +++++D Y+ + V D YD L + F Sbjct: 14 LTSDHAKKIVDFLALELQKYDQAYYSDNNPLVTDAQYDVLKNLNNKIVAKFPHLALVNDH 73 Query: 79 PRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWM---------RERSDLWVQPKVDG 127 + V P V+H + +S ++ + + K+DG Sbjct: 74 SKKVGFTPSAQFSKVVHLKPMLSLANGFCVEDISNFITKIQNFLKIDHCPKIVCEYKIDG 133 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 ++ Y G L A +RG+G GE+ T+ + I + PQT+ ++GEI++ Sbjct: 134 LSFNARYEYGVLTLASTRGDGQIGENITENLKTIQSFPQTLPITDKVFEVRGEIYITNND 193 Query: 188 HIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD-----GPQLMS 233 N R AG + + D + T L FV+A + Sbjct: 194 FRVLNIQQQKLGKALFSNPRNAAAGSIRQLDPAITAQRPLKYFVYALGEVTNHHFASTQF 253 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK--EPES 289 + L++L+ F++ Y N + N + L F DGVV + E Sbjct: 254 ELLQKLSQLKFSVNTDYI-LSDNLHSMIEFYNNVATERNNLAFEIDGVVYKVNDFALQER 312 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 + +A+K+ + ++ I VGK+G ++ VA L P+ + + R + Sbjct: 313 LGATSTSPRFAIAYKFPALIGRTKITNITLQVGKTGAVTPVAWLIPINIAGVTISRATLH 372 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE------RTKPTPPENR------- 396 + + + DI GD + + AG IP+I+ V + PT + Sbjct: 373 NKQEIESKDIRIGDYVFLHRAGDVIPKINGVDLSARDTQSSERFIFPTTCPSCNQNLVVN 432 Query: 397 -FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT 455 ++ S CQ Q R+ +K L +DG+G+ + L +I LL Sbjct: 433 EGETVARCGNSLACQAQIYERICHFVSKDALNIDGLGKQRIQFLLDNKYIVNIVDIFLLE 492 Query: 456 P-------EQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASD 505 +L++ G +L+ N A+ +++ A+ I A L A + Sbjct: 493 ENNKFLYSNKLEDIAGWGIKSVNKLFQNINQAKNVILDKFIYALAIKHVGKYSAKLLAKE 552 Query: 506 ERSWSQLLFST----------EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 ++ + + + + + G G A Q+ ++ + L + L Sbjct: 553 FKTAKNFINQSLKLANNATEIYEKLRNIEGVGVKTADQLKQFFMVSANVNLITKLVN 609 >UniRef50_A0LDY1 DNA ligase n=4 Tax=cellular organisms RepID=DNLJ_MAGSM Length = 768 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 116/575 (20%), Positives = 213/575 (37%), Gaps = 57/575 (9%) Query: 29 RAQEEISR--LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPP 86 R QE ++ + + ++ + D+Y + D L R + + + Sbjct: 95 RVQEGLAESVVVEAVQHYQDEY------GLSDLG--ALVGRPGALEGVARDVTQRLNQTL 146 Query: 87 LNGAVMHPVAHTGV----RKMVD-KNALSLWMRERS---DLWVQPKVDGVAVTLVYRDGK 138 + P + RK D L LW E+ + +PK+DG+A +L Y +G Sbjct: 147 SFVEPLQPPDTKSLLSSGRKAADILRRLRLWAAEQPQRVEYVAEPKLDGLAFSLTYAEGV 206 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQMG-- 194 L +A +RG+G +GED T I VP + G A ++GE+++ + Sbjct: 207 LVRAATRGDGQEGEDVTAHARTIQDVPLRLQGAGYPALLEVRGEVYMPLATFEKLNAEAR 266 Query: 195 ------GINARAKVAGLMMRQDDSDTLNS-LGVFVWA--WPDG---PQLMSDRLKELATA 242 N R AG + + D T + L +F + + +G ++ L L Sbjct: 267 ERGEKTFANPRNAAAGSLRQLDPKITASRGLRMFCYGTGYVEGGTLADRYAEILAALKGW 326 Query: 243 GFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAK--EPESRHWLPGQAE 298 G ++ R V+ A + LP+ DG V++ E ++ Sbjct: 327 GLRVSPEAER-VEGAQGCLAYTERLGEKRETLPYEIDGAVLKVDSQRLRERLGFVARAPR 385 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W +A+K+ + V+AI VG++G I+ VA L PV + V + + D Sbjct: 386 WAMAFKFPATEESTTVQAIDLQVGRTGVITPVARLEPVAVGGVTVTNATLHNFLELARKD 445 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERT------KPTPPEN-------RFNSLTCYFA 405 + GD+++V AG IP + V+ R + P + Sbjct: 446 VRVGDRVIVRRAGDVIPEVVRVIPRESHGALAVYKEPVACPVCGAPTEREGGETALRCSG 505 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ--LQNTP 463 C+ Q + +++ + ++G+G+ L Q E I L ++ L Sbjct: 506 GLTCRAQVKEGVKHFASRKAMNIEGLGDKLVALLMQAGLVERISDLYRLHEQRQVLVGLE 565 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFW 520 + A L ++ Q R++ +GI A A+ S L+ +T + Sbjct: 566 RLGGKSVANLLEAIEQSKAQSAARFLFGLGIRDVGVTLAGSLAAHFTSLDALMAATVEDL 625 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + G AR+V+ + A + L A + Sbjct: 626 VGIEDVGEVVARRVVHFFAQAHHGAELAALRALGV 660 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 8/98 (8%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPP 86 + L++++ + Y S V D YD+L L + S V Sbjct: 5 RAAELRKRLNHYAHSYHTLDTSLVSDAEYDRLFRELQSLEAADPTLISADSPTHRVGGAI 64 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQ 122 L G V H VA + L + R + + Sbjct: 65 LEGFEKVRHRVAMLSLDNAFSAQDLVEFHRRVQEGLAE 102 >UniRef50_B2VL61 Putative NAD-dependent DNA ligase n=1 Tax=Erwinia tasmaniensis RepID=B2VL61_ERWT9 Length = 561 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 241/554 (43%), Positives = 349/554 (62%), Gaps = 2/554 (0%) Query: 7 ILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSA 66 ++ + S++ A CP WS +RA EIS LQ Q+++WDD Y++ G+S + D YD L Sbjct: 4 AILAAWLFSSAIQAQCPVWSASRADAEISALQAQLEKWDDAYYRRGESPIPDEQYDTLHG 63 Query: 67 RLTQWQRCF-GSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKV 125 +L QWQRCF + + +G V+HPV+H V+K+ DK AL+ WM RS LWVQPK+ Sbjct: 64 KLRQWQRCFSPASDLRKPLLKTDGKVLHPVSHMRVKKLPDKTALTRWMARRSGLWVQPKI 123 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQR 185 DGVAV+L+YRDG+L + ISRG+G++GEDWT+K LI +P+ + + QGE++L+ Sbjct: 124 DGVAVSLLYRDGQLEQMISRGDGVRGEDWTEKARLIPDIPKFIPHSMRVQVFQGELYLKM 183 Query: 186 EGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFT 245 H Q GG NAR+ VAG +M + + L +G FVW WPDGP ++ RL E + GF Sbjct: 184 TDHRQAINGGKNARSAVAGALMAKAPAPLLQQIGFFVWEWPDGPTSLAQRLTETRSLGFP 243 Query: 246 LTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKY 305 +T V N DEV R W+ LPFVTDG+VV + WLP EW++AWKY Sbjct: 244 DISAWTHRVDNVDEVESWRERWFHQPLPFVTDGIVVHSIPTRRGSDWLPEFGEWVIAWKY 303 Query: 306 QPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQI 365 P AEV++++FA+G++G+++VV +L PV L DK++ RV++GS+ W++ D+ GDQ+ Sbjct: 304 APPEATAEVRSVEFAIGRTGRVNVVLNLLPVQLGDKRISRVSVGSIENWKQTDVIAGDQV 363 Query: 366 LVSLAGQGIPRIDDVVWRGAERTKPTPPE-NRFNSLTCYFASDVCQEQFISRLVWLGAKQ 424 +SLAG G PR+D V+WR AER P P+ +FNS++C+ + C++QF++RL WLG K Sbjct: 364 SISLAGLGAPRLDKVLWRVAERAYPPQPDAAQFNSVSCFHLTPQCRQQFLARLEWLGGKS 423 Query: 425 VLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQP 484 VL L G G W+ L Q+ HIFSWL LT EQL+ PGI + ++ W QF L+R+ P Sbjct: 424 VLNLVGTGRQTWQQLIQSGSMVHIFSWLALTKEQLEAVPGIGEQRAQLFWQQFKLSRQLP 483 Query: 485 FTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIK 544 F RWV A+G+P+ ALN + +W L+ Q WQQLPG G A +++ + + +++ Sbjct: 484 FKRWVKALGVPIPEKALNTLTDDNWQPLVSRRLQEWQQLPGVGRKLAGKIVSFLQQREVR 543 Query: 545 KLGSWLAAQQITGF 558 +L L IT Sbjct: 544 QLIEGLEPPLITPV 557 >UniRef50_C4XEU9 DNA ligase n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEU9_MYCFE Length = 664 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 107/576 (18%), Positives = 235/576 (40%), Gaps = 48/576 (8%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 A + +++I L ++ QW+ +Y+++ V D YD+ L Q ++ + S Sbjct: 4 AMNALDIKKKIIELSNKLNQWNKEYYQDNNPSVSDFEYDKALQELEQLEKKYPQFIYVNS 63 Query: 78 EPRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDG 127 + + V+H + K D + + ++ + ++PK+DG Sbjct: 64 PTQKLGSFADNKFKKVVHQKPMLSLSKAYDYSEIEKYVNNIEKLVPIEDINFSIEPKIDG 123 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 ++++L Y G LN+A++RG+G +GED T+ + I+++P+ ++ A ++GE+FL + Sbjct: 124 LSISLHYNHGFLNQALTRGDGHEGEDVTENIYQIASIPKIINYD-AELEVRGEVFLPKAE 182 Query: 188 HIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQ----LMSD 234 + N R +G + + D + L F++ + + Sbjct: 183 FQRLNENLIKAGEKPFSNPRNAASGTLRQLDPTIVKNRQLASFLYELVEPQKHNITTQEQ 242 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPE--SRHW 292 L+ + E A K +L + DG+V++ Sbjct: 243 ALEFFQKLNIPTNPYHKVVEVEELEEAISFFAEMKNKLNYDADGLVIKLNNLTYWNKMGK 302 Query: 293 LPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVR 352 + +A+KY+ ++ +K I+ VG++GKI+ VASL PV L+ V+ + + Sbjct: 303 TAKFPKHSIAFKYEVETAISTIKDIKTTVGRTGKITYVASLEPVELNQTIVRAATLHNYN 362 Query: 353 RWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENR---------FNSLTCY 403 ++ +I DQ+ + AG+ IP++ +V + ++ E +++ + Sbjct: 363 FIEDLNININDQVQIVKAGEIIPKVLALVKKQSKGVFGKTLECPSCGSVLVEIEDNVDQF 422 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQN 461 + C E I+ + +++ L + G+G + ++ + + I L ++L Sbjct: 423 CVNKNCPEMTINAIYHFASRKSLNIVGLGLITVKDFYKHNLVKSIEDIFNLHKHKDELLK 482 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ 518 A+ K L A+ F++ + A+GI A L + ++ +L+ ++ Sbjct: 483 LERYAELKVNNLLTNIGKAKDSTFSKVLFALGIKHVGERAAKLISKQYHNFDELICEKDE 542 Query: 519 --FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 + G + E+ +N + KL Sbjct: 543 LAKISAINNIGPKILDSLKEYLKNEENVKLLRKFDE 578 >UniRef50_B3PMJ0 DNA ligase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=DNLJ_MYCA5 Length = 665 Score = 543 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 107/582 (18%), Positives = 223/582 (38%), Gaps = 52/582 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF----------G 76 + + E+ LQ +I +WD+ Y+ VED +YD+ +L + + + Sbjct: 4 KEKIRNEVFELQAKINEWDNAYYNLDAPLVEDAIYDREILKLKKLEEQYSSYFSFEELAN 63 Query: 77 SEPRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGV 128 S + + L V H + K + + ++ +++PK+DG+ Sbjct: 64 SPTQKINAKSSDLFKKVTHDSPMLSLNKAYTEEEIQKFIDNIKKVTPTFSFFLEPKIDGL 123 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 ++++ YR+G+L +A++RG+GL GED T+ + I +P+ ++ ++GE++L Sbjct: 124 SISIKYRNGQLFQAVTRGDGLVGEDVTENIKQIKNIPKEIAY-QKPLEVRGEVYLALSEF 182 Query: 189 IQQQMGG--------INARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQ----LMSDR 235 + + N R AG + + D N L F++ + + Sbjct: 183 EKINLNFQKENKPLMANPRNAAAGTLRQLDKEIVANRNLSAFLYNIVAPEDHNIFTILEA 242 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEP--ESRH 291 L GF++T+ T K+ E+ + K L + TDGVV++ + ++ Sbjct: 243 RDFLKNLGFSVTKEAT-YAKDLSEINSYIENFKHLKKTLDYETDGVVIKLNELQHYDALG 301 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 +A+KY+P +K I VG++G ++ A L PV+L + + + Sbjct: 302 ATNKFPHSAIAFKYEPNTTTTVLKNIFITVGRTGLVTYNAELEPVILSGSCITFATLNNY 361 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS----------LT 401 + ++ + GD + + AG+ IP + +V + E T+ L Sbjct: 362 QYIKDLKLNKGDLVYIKKAGEIIPCVIGLVNKKHEETEFNKFLKCPYCNSDLIETDTLLE 421 Query: 402 CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQL 459 Y +++ C E +++ +K+ + L+ +GE E++ + L +++ Sbjct: 422 QYCSNENCPEIRRKKIIHFASKKAMELNSLGEKNIDVFINEGLLENVIDFYKLKEKKDKI 481 Query: 460 QNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFST 516 + + ++K R + + I + + AS S L Sbjct: 482 MSLERFGTKSVMNILKSIEESKKNSLDRVIFGLSIKHIGSKVAYFLASKILKLSNFLDFD 541 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 G + W + K L L + Sbjct: 542 FDSLISYNEIGEKIISSLKNWVAKEENKNLVKDLLDNDVDLE 583 >UniRef50_Q8D2B9 DNA ligase n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=DNLJ_WIGBR Length = 591 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 100/582 (17%), Positives = 222/582 (38%), Gaps = 55/582 (9%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPL- 87 + + +I L+++I+ W+++Y+ + S V D YD L + ++ + + Sbjct: 9 KIKTKILNLRKKIEMWNNNYYVKNLSLVSDEKYDSTLFELNELEKKYSMFLNTSYSNKIV 68 Query: 88 -------NGAVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVDGVAVT 131 + H + + + L + + + K+DG+A+ Sbjct: 69 AKNICNKFKKIKHLSNMLSLESIFNYKNLLNFHEKVKKNLFYNEKRYYCCELKIDGLAIN 128 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP----LANSTLQGEIFLQREG 187 L+Y++G L+ A +RG+GL+GED T+ I ++P + ++GE+F++ Sbjct: 129 LIYKNGILDSASTRGDGLQGEDVTKNALEIKSIPHILKKNNLSFPKKIEIRGEVFIKLST 188 Query: 188 HIQQQM--------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQ-----LMS 233 + NAR +G + + + T N L + + + Sbjct: 189 FNKINKMLKSKRKKLFSNARNMASGSLRQINPKITKNRSLSFYGYGIGYVNEKKYYYDQH 248 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAK--EPES 289 D LK + + G + + T K+ +EV + + L F DG+VV+ + Sbjct: 249 DALKLINSWGIPI-EKNTELCKSLNEVKNFYEKSIKIRDYLDFNIDGIVVKVNSMKLQKK 307 Query: 290 RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349 W +A+K+ + ++ + F VG++G I+ VA L PV ++ ++ Sbjct: 308 LGCSSKYPRWAIAYKFSSEEKCTKILGVNFNVGRTGVITPVAKLKPVYFMGTIIKYSSLH 367 Query: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA--------ERTKPTPPENRFNSLT 401 + + I D + + +G IP+I V++ +T L Sbjct: 368 NKDIIDKLGIMINDTVCLKKSGDVIPKISRVIFEKRKNVKEIIFPKTCIFCKSKIEFCLR 427 Query: 402 ----CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE 457 +C Q L +++ L + G+G L + ++ L + Sbjct: 428 KKNLYCTGGFLCYAQRKQLLNHFVSREALNIKGMGNKIISQLIEKKIIKYPSDIFKLNTD 487 Query: 458 QLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLF 514 ++ G+ S L + ++ R + +GIP + A+ ++ S + Sbjct: 488 KIIFLKGMGLKSSENLIKEIIKSKTTELYRVIYGIGIPNVGIYTSMNLANYYKNISNFIN 547 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 ++ + + + G GS + + ++ ++ + + S L + Sbjct: 548 TSYEDLRSIKGIGSFTSNCIKKFLKDKRNISIISDLLNVNLK 589 >UniRef50_Q2P334 DNA ligase n=26 Tax=Gammaproteobacteria RepID=DNLJ_XANOM Length = 841 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 116/654 (17%), Positives = 218/654 (33%), Gaps = 132/654 (20%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 E L+++I+ D Y+ E+ D YDQL L + ++ + S V Sbjct: 7 ERARELRRRIENADHRYYDLADPEITDAQYDQLFRELQELEQKYPELVTADSPSMRVGGA 66 Query: 86 PLNG--AVMHPVAHTGVRKMVDKNALSLWMR---------ERSDLWVQPKVDGVAVTLVY 134 V H + + D+ + ++ + V+PK DG+A++L Y Sbjct: 67 VRKSFVKVRHSIPMLSLANAFDEVEVKNFVDRIFRRMGSSNPLEFSVEPKFDGLAISLRY 126 Query: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQ 192 GK + ++RG+G GED ++ + I +VP + G A ++GE+++ R+G + Sbjct: 127 ELGKFVQGVTRGDGDVGEDVSENIRTIRSVPLKLKGNNVPAILEVRGEVYMPRDGFSEFN 186 Query: 193 MG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP--------------DGP 229 N R AG + + D + L F + Sbjct: 187 KRAMARGEKLLANPRNGAAGSLRQLDSRISAQRPLSFFAYGVGLIQVEQDLFEEIPQSIA 246 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEP 287 S L +L GF ++ + V+ +D + + LPF DGVV + Sbjct: 247 STHSAMLAQLRAWGFPVS-SLVEVVQGSDGLLAYYQRIGEARDGLPFDIDGVVYKLDDLA 305 Query: 288 ESR--HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 R ++ W +A K+ Q V+AI+ +G++G + VA L PV + V Sbjct: 306 GQREMGFVSRAPRWALAHKFPAQEQSTTVEAIEIQIGRTGAATPVARLKPVHVAGVIVTN 365 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TKPTPPENRFN-- 398 + + + D+ GD ++V AG IP + VV PT + Sbjct: 366 ATLHNADQIARLDVRVGDTVIVRRAGDVIPEVAAVVADQRPPATQSWQMPTQCPVCGSEI 425 Query: 399 ------SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWL 452 ++ C Q +++ + +DG+GE L + + + Sbjct: 426 VREEGQAVWRCSGELTCPAQRKEAFRHFVSRRAMDVDGLGEKFIEVLVDSGVVQGVADLY 485 Query: 453 LLTPEQLQNTPGIAKSKSAQLWHQFNLARK-------QPFTRWVMAMGIPLTRA------ 499 LLT +QL I+ + AR+ ++ +G+ L Sbjct: 486 LLTVDQLLQLRMIS--TAESPHAFLREAREHLASGAYAQLEATLVGIGVDLAGEREVPQT 543 Query: 500 ----------------------ALNASDERSWSQLLFSTEQFWQ---------------- 521 + + +T + + Sbjct: 544 WQADLLRAGLPTFDWNRKKIATKWAENLIEAIETSRDTTLERFLFALGIEHVGESTAKAL 603 Query: 522 -------------------QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 ++P G AR + + + +K L A+++ Sbjct: 604 SAWFGDLDLIRHLPWPLFKRVPDIGGEVARSLGHFFDQPGNQKAIDHLLARKVR 657 Score = 42.1 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 38/149 (25%), Gaps = 33/149 (22%) Query: 425 VLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKS------------AQ 472 LG++ +GE+ +AL F + L + P I + + Sbjct: 589 ALGIEHVGESTAKALSA--WFGDLDLIRHLPWPLFKRVPDIGGEVARSLGHFFDQPGNQK 646 Query: 473 LWHQFNLARKQ---------------PFTRWVMAMGIPLT---RAALNASDERSWSQLLF 514 + + + + IP RAA A+ S L Sbjct: 647 AIDHLLARKVRIGDTHPPSPKLRGELRLANLLEDLEIPKVTPIRAAQIATAFGSIDALRN 706 Query: 515 STEQFWQQLPGTGSGRARQVIEWKENAQI 543 + + G A + W Sbjct: 707 GGPEPLVE-AGVPQSVAESLATWLLVPAN 734 >UniRef50_C9Y3A9 DNA ligase B n=4 Tax=Enterobacteriaceae RepID=C9Y3A9_CROTZ Length = 550 Score = 538 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 288/544 (52%), Positives = 381/544 (70%), Gaps = 1/544 (0%) Query: 17 SVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 S +A CP W+ +A++E++ L+ Q+ +WD+ YW G++ V D VYD + RL W+ CF Sbjct: 5 SAYASCPGWTSEQARQEVAALESQLARWDEAYWLRGENNVSDAVYDGMRQRLNVWKTCFS 64 Query: 77 SEPRDVMMPPLN-GAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYR 135 PP+ G HPVAHTGV+K+ D +LS WM ++DLWVQPKVDGVAV+LVYR Sbjct: 65 LATVSAAPPPVAAGRTHHPVAHTGVQKLKDAASLSQWMHGKTDLWVQPKVDGVAVSLVYR 124 Query: 136 DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGG 195 G+L + ISRG+GL+GEDWT + I A+P V G LA+S LQGE+FL+REGH QQQ GG Sbjct: 125 KGELRQVISRGDGLQGEDWTARARHIPAIPLQVKGELADSVLQGELFLRREGHHQQQDGG 184 Query: 196 INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK 255 INARA+VAG MMR S LN L +F+WAWPDGP+ M RL LA GF L + +++ V Sbjct: 185 INARAQVAGAMMRNTASPLLNDLDLFIWAWPDGPKEMETRLTILAQGGFPLARAWSQPVS 244 Query: 256 NADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVK 315 + +V R R +W++ LPFVTDGVV+R A+EP + W PG+ W+ AWKY PV QV EV Sbjct: 245 SVADVTRWRKQWFREPLPFVTDGVVIREAREPPGKSWRPGEGSWVAAWKYPPVKQVTEVN 304 Query: 316 AIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIP 375 A++FAVG++GKISVVA L P+ LDDK+V +V+IGS+ RW++ D+A GD++ VSLAGQGIP Sbjct: 305 ALRFAVGRTGKISVVAQLEPITLDDKQVSKVSIGSLTRWEKLDLAEGDEVEVSLAGQGIP 364 Query: 376 RIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAG 435 R+D VVWR A+R+KP PP RF++L+C FA+ C+EQFISRLVWL K V L G+GEA Sbjct: 365 RLDAVVWRPAKRSKPAPPAARFDALSCLFATGACEEQFISRLVWLSGKPVFDLAGMGEAT 424 Query: 436 WRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 WR L HRFEH+FSWL L+ + L+ TPG + ++ +LWHQFNL R+ PF RWV A+G+P Sbjct: 425 WRQLSSRHRFEHLFSWLALSVDALKQTPGFSAPRATRLWHQFNLTRQLPFQRWVKALGLP 484 Query: 496 LTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 L A A + +W QL E+ WQ LPG G+ RARQ++ + + + L WL Q+I Sbjct: 485 LPARAWQALADDTWHQLQMRDERSWQTLPGVGAERARQLVNYIHHPDVAALAQWLVEQKI 544 Query: 556 TGFE 559 GF Sbjct: 545 DGFA 548 >UniRef50_A1QZY4 DNA ligase n=3 Tax=Borrelia RepID=DNLJ_BORT9 Length = 676 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 118/581 (20%), Positives = 228/581 (39%), Gaps = 51/581 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 ++EI L+ I++W+ +Y+ + V D YD+ RL + + S Sbjct: 11 KDIEDEILCLRDNIRKWNKEYYVDSSPSVSDLTYDKALLRLQDLESKYPEYKTLDSPTLK 70 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERS----------DLWVQPKVDGVA 129 LN V H + K D L LW+ + + V+PK+DG + Sbjct: 71 FGSDLLNNFEEVTHSFPILSLDKAYDIKELLLWIEKMVLEGSSLGSYTGISVEPKIDGCS 130 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 + L Y+DG L KA++RG+G G D T+ V I VP ++ + L+GEI++ +E + Sbjct: 131 IVLYYKDGILQKALTRGDGRVGNDVTENVRTIKNVPLSIDEKVE-LVLRGEIYITKENFL 189 Query: 190 QQQMGGINA----RAKVAGLMMRQDDSDTLN-SLGVFVWAWPD---GPQLMSDRLKELAT 241 + N R +G++ R + + + L +FV+ G D +L Sbjct: 190 KINHTLKNPYLNARNLASGILRRINSREVASFPLDIFVYDILYSSFGLSTNHDAFDKLKK 249 Query: 242 AGFTLTQTYTRAV--KNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPES--RHWLPG 295 GF + + + KN +E+ E + L + DGVV++ + Sbjct: 250 FGFKINP-FCKFFGGKNLEEITNHVKKIEMQRNSLEYEIDGVVLKVDSFILRDILGYTSH 308 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 +W VA+K++ V+++ I VG+SGKI+ VA + V + + ++ + Sbjct: 309 HPKWSVAYKFESCTGVSKIVDIVVQVGRSGKITPVAHVEKVFVAGAFITNASLHNQDYID 368 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWR---GAERTKPTPPENRF----NSLTCYFASDV 408 + GD + +S G IP ++ VV + G+ + P + + + Sbjct: 369 SIGLNVGDVVAISRRGDVIPAVELVVEKLSIGSFKISSNCPSCKMALIKEGSHLFCVNKH 428 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKS 468 C + I ++ + +K+ + + G+ L + ++L N G Sbjct: 429 CPYRIIEQIKYFCSKKCMNIVGLSGKTIEFLFEMKFISSEIELYTFNFDRLINLRGFDLK 488 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNA----SDERSWSQL------LFSTEQ 518 + L + ++ +PF + ++ MGI A ++ S+ + + Sbjct: 489 RIDNLKRSISDSKGRPFRKLLLGMGIKELGANTILVLINNNLNSFDIISTLCKNKEAALA 548 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 ++ G G A +IE + I ++ E Sbjct: 549 KLLKIKGIGEKIALNIIEAFNDKIILDKFNFFKELGFKLEE 589 >UniRef50_C6XGZ2 NAD-dependent DNA ligase LigA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGZ2_LIBAP Length = 731 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 114/622 (18%), Positives = 222/622 (35%), Gaps = 93/622 (14%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG----SEP 79 A S +A++E+S L+Q+I DD Y++ K + D YD L R F SE Sbjct: 11 ALSIEQARKELSSLEQEISYHDDCYYQYSKPIILDSEYDALKRRCDAIAHAFPDLARSED 70 Query: 80 RDVMMPPLNG-------AVMHPVAHTGVRKMVDKNALSLWMRERSDLW-----------V 121 + + + G V H + + K+ + L ++ W + Sbjct: 71 PNGPLNKIGGEMNLSLFKVTHSIPTLSLEKIWNIEDLRKFITRIYRFWQKKDDNSIFFTL 130 Query: 122 QPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGE 180 +PK+DG +T+ Y GK A RG+G GED + + I +P+ +S ++GE Sbjct: 131 EPKIDGTMITIRYEKGKFVYAALRGDGHSGEDVSACIRAIPTIPRVLSLNIPEIIEVRGE 190 Query: 181 IFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQL- 231 +++ + + N R +G++ R + +D L FV ++ Sbjct: 191 VYISKNDFLALNDEMIAVGRKPYANPRNAASGILRRLNPTDITRYLNFFVHGLGKTSEIF 250 Query: 232 ---MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAK- 285 + L+++ GF + R + NE ++ LP+ DG+V + + Sbjct: 251 AKGQYEMLQKMRCLGFPVNNG-VRQANTFHGIVSYYNEMKSIRSTLPYDIDGLVYKVDEF 309 Query: 286 -EPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344 + W+++ K+ + I +G++G ++ VA L PV + + Sbjct: 310 SLQKQLGERARSPRWMISHKFAEKQASTRLLDIDIQIGRTGILTPVARLEPVNIGGALIT 369 Query: 345 RVNIGSVRRWQEW-----------DIAPGDQILVSLAGQGIPRIDDVV--WRGAERTKPT 391 + + + DI GD++LV AG+ IP++ D++ R + + Sbjct: 370 NATLHNEDYIKGLDASGKVMRGGRDIRVGDRVLVKRAGEVIPKVVDIIVNERHPDAQPFS 429 Query: 392 PPENRFNS-----------------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEA 434 P C Q + RL ++ ++G+G+ Sbjct: 430 FPSFCPICQSRVVRDLNPKTGKLVAAHRCTGGLACSAQQLERLKHFVSRDAFNIEGLGKQ 489 Query: 435 GWRALHQTHR----FEHIFSWLLLTPEQ------LQNTPGIAKSKSAQLWHQFNLARKQP 484 ++ L Q ++N G L+ N R Sbjct: 490 QLDFFFKSEDPAFSIRIPADIFTLQRRQQTSTTKIENILGFGDVSVTNLYDSINKRRNIS 549 Query: 485 FTRWVMAMGIPLTRAAL---NASDERS-------WSQLLFSTEQFWQQ---LPGTGSGRA 531 R++ ++GI A + A S + ++ W +P G A Sbjct: 550 LERFIFSLGIRHVGAEIARSLAKYYLSYQNFAQEINNIIAHNNDDWLSLIRVPLVGDIIA 609 Query: 532 RQVIEWKENAQIKKLGSWLAAQ 553 + ++E+ +N + L + Sbjct: 610 QAIVEFYQNPRNICAVEALLKE 631 >UniRef50_B5JQN2 DNA ligase, NAD-dependent n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQN2_9BACT Length = 718 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 119/618 (19%), Positives = 233/618 (37%), Gaps = 65/618 (10%) Query: 1 MKVWMAILIGILCWQSSVWAVCPAWSPARAQE------EISRLQQQIKQWDDDYWKEGKS 54 ++VW+ + + I C S ++ E + L+ +I + DD Y+++ Sbjct: 17 VRVWLLVSMCI-CLAGSFGVYSTFGDTSKLSEEERGRGRLVELRAEIARHDDLYYRKAAP 75 Query: 55 EVEDGVYDQLSARLTQWQRCFGSE------PRDVMMPPLN--GAVMHPVAHTGVRKMVDK 106 E+ D YD L L + + + ++ G H + K + Sbjct: 76 EISDADYDALKRELHRLEELYPDLQDGLLIVDEIGDDRSGVRGEFRHFAPMLSLEKAYTE 135 Query: 107 NALSLWMRE--------RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKV 158 AL + D V+PKVDG+A++++Y G+ +A+SRGNG GED ++ V Sbjct: 136 EALLSFYDRVLSQLTFEELDCLVEPKVDGMAISVLYERGEFVRAVSRGNGRVGEDVSENV 195 Query: 159 SLISAVPQTVSG--PLANSTLQGEIFLQREGHIQQQM--------GGINARAKVAGLMMR 208 I +P+ + P L+GE+++ EG + + R+ AG + Sbjct: 196 LRIEGLPRRLETESPPERVELRGEVYVSFEGFRRLNEARVAAGEEPFAHPRSLAAGSLKL 255 Query: 209 QDDSDT-LNSLGVFVWAWP------DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVA 261 D SL + + + + P+ S + G + + + +A Sbjct: 256 DDPEVVSERSLSIVFFGYGAFEPVEEAPETQSGFYGLAQSWGIPVLEELRKTRGTEALLA 315 Query: 262 RVRN-EWWKAELPFVTDGVVVRAA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQ 318 VR E + PF DG VV+ W +A+K+ + I+ Sbjct: 316 AVREMEERRVLYPFPMDGAVVKIDRADVQRELGLGTSAPRWAMAYKFAEKRVETRLLGIR 375 Query: 319 FAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRID 378 VG++G ++ VA L + L ++R ++ + + D+ GD + + AG+ IP + Sbjct: 376 IQVGRTGLLTPVAELEEIRLGGSSIRRASLHNGGVIERMDLRIGDVVYLERAGEVIPNVV 435 Query: 379 DV--VWRGAERTKPTPPENRFNS----------LTCYFASDVCQEQFISRLVWLGAKQVL 426 V R + TK P+ + + Y S C Q ++ + + + Sbjct: 436 GVNLAKRKSSSTKYVFPDLCPSCGYAAELDEGRVERYCRSSTCPAQAQRKIEHFASSRAV 495 Query: 427 GLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFT 486 G++GIG A L E + LL L +++ + +L + + +R Sbjct: 496 GIEGIGPAKIADLMDAGLVETVADLYLLEVPDLVQAGVGSEAVARKLVSEISGSRAASLW 555 Query: 487 RWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFW------QQLPGTGSGRARQVIEW 537 R + +GIP + A+ + ++ + ++ G G V+ + Sbjct: 556 RVLFGLGIPEVGVSRSKKLAAAYGDLAAFARASALDFSPGGRAAEV-GFGPVAREAVLAY 614 Query: 538 KENAQIKKLGSWLAAQQI 555 + ++L L + Sbjct: 615 LSLDENRELIGRLVELGL 632 >UniRef50_B2S0Q2 DNA ligase n=19 Tax=Borrelia RepID=DNLJ_BORHD Length = 669 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 116/581 (19%), Positives = 219/581 (37%), Gaps = 50/581 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 ++EI RL+ IK+W+ +Y+ + V D YD+ RL + + S Sbjct: 3 EDVEDEILRLKNIIKRWNREYYVDSSPSVGDLTYDKALLRLQDLESKYPEYKTLDSPTFR 62 Query: 82 VMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRE----------RSDLWVQPKVDGVA 129 L V H + K D LSLW+ + + + V+PK+DG + Sbjct: 63 FGSDLLNDFEEVKHSFPILSLDKTYDIKGLSLWIEKMVLESAISGLHTGISVEPKIDGCS 122 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 + L Y+DG L KA++RG+G G D T+ V I VP + + L+GEI++ +E + Sbjct: 123 IVLHYKDGILEKALTRGDGRVGNDVTENVKTIRNVPLRIDEKIE-LVLRGEIYITKENFL 181 Query: 190 QQQMGGINA----RAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGP---QLMSDRLKELAT 241 + N R +G++ R + N L +FV+ D +L Sbjct: 182 KINRTLKNPYVNARNLASGILRRISSKEVANFPLDIFVYDILYSSLKLNTSHDAFDKLKQ 241 Query: 242 AGFTLTQ--TYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPES--RHWLPG 295 GF + + + E + + DGVV++ Sbjct: 242 FGFKVNPFCEFFGGKNLEAGIIAHVKKIEALRDSFEYEIDGVVLKIDSFILRKILGSTSH 301 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 +W +A+K++ +++V I VG+SGKI+ VA + V++ + ++ + Sbjct: 302 HPKWSIAYKFESCTGMSKVVDIVVQVGRSGKITPVAHVEKVLVAGASITNASLHNQDYID 361 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRF-------NSLTCYFASDV 408 + GD +++S G IP +D V+ + A + P + + Sbjct: 362 FVGLNVGDIVVISRRGDVIPAVDLVIEKLAVGSFKIPSNCPSCKMTLIKEGAHLFCVNRH 421 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKS 468 C + I ++ + +K+ + + G+ E L + ++L N G Sbjct: 422 CSCRIIEQVKYFCSKKCMNIVGLSEKTIEFLFEKKFISSEVELYTFNCDRLINLKGFNLK 481 Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALN-------ASDERSWSQL---LFSTEQ 518 + L ++ +PF + ++ MGI + + S L + Sbjct: 482 RINNLKRSIEDSKSRPFRKLLLGMGIKDLGENTILVLINNNLNSFDTISTLCKNKEAALA 541 Query: 519 FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 ++ G G A +IE + I ++ + E Sbjct: 542 KLLKIKGIGERIALNIIEAFNDKTILDKFNFFKELGLKMEE 582 >UniRef50_Q7NAF8 DNA ligase n=1 Tax=Mycoplasma gallisepticum RepID=DNLJ_MYCGA Length = 717 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 108/625 (17%), Positives = 225/625 (36%), Gaps = 96/625 (15%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 +E I L +++ +W+ +Y+ V D VYD L ++R + S + Sbjct: 8 NESIKEIIEDLVKKLTKWEHEYYVLSNPSVSDEVYDNTYRTLLGYERKYPQYVLSYSPTQ 67 Query: 81 DVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------LWVQPKVDGVAV 130 V N V H + + L + + ++PK+DG+++ Sbjct: 68 RVGSSISNKFIKVKHDYLMLSLGNCFNFEELLNFNENIAKISKQEDNPYVLEPKIDGLSI 127 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ 190 +L+Y DG L++A++RG+G+ GE + I +P ++ + ++GE+++ + Sbjct: 128 SLIYLDGVLSEALTRGDGVFGESVIANIKTIKTIPLKINTTIKKIVIRGEVYVSNQDFEA 187 Query: 191 QQ------MGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPD----GPQLMSDRLKEL 239 N+R +G + D S+ L F + P+ G + +++L Sbjct: 188 INASRDEDKKFANSRNYASGSLRNIDVSEVAKRKLNAFFYYIPNAYELGFETQYQVIQQL 247 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEP--ESRHWLPG 295 GF + + + N E+ E K +L + DG V++ E + Sbjct: 248 KEWGFNVAKE-IKLFSNIKELYTSLKELENNKNKLDYRIDGAVIKYNNFKDYEIIGYTSK 306 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 +W +A+K+ P ++K I VG++GK++ VA LAP+ L+ + + ++ Sbjct: 307 FPKWAIAYKFAPTQVQTQLKDIILNVGRTGKLTFVAQLAPIELEGSIITYATLHNLEYIN 366 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAER------------TKPTPPENRFNSLTCY 403 + DI D + + A + IP++ V + P + + Y Sbjct: 367 DLDIRINDYVYLIKAAEIIPKVIGVNLDKRPNNAKKLEFDYNCPSCHQPLVKKPEEVDWY 426 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH-------------------- 443 D C+++ + L++ +K ++ ++G+ E+ T Sbjct: 427 CIYDQCKQKQLQYLIYYCSKPIMNIEGLSESTLALFFNTKVNDVIRECNELITNQNVSED 486 Query: 444 -------------RFEHIFSWLLLT----------------PEQLQNTPGIAKSKSAQLW 474 + L L+ + +L Sbjct: 487 LSLFKLLDNEEQTFVNSVLDIYQLERYKEIIIKPWLKKGFSKSSLKYNFRFQEKSFDKLI 546 Query: 475 HQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRA 531 + N ++ + R + A+ I A A+ QL T + + +L S A Sbjct: 547 NSINESKNRELYRLLAALNIKYIGIATAKSIANTYHDIDQLKNLTVEDYMRLADISSITA 606 Query: 532 RQVIEWKENAQIKKLGSWLAAQQIT 556 + + + + +L L I Sbjct: 607 NSLFSFFSDEKNWELIEQLKTLSIN 631 >UniRef50_Q6AEE5 DNA ligase n=2 Tax=Leifsonia xyli subsp. xyli RepID=DNLJ_LEIXX Length = 747 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 118/649 (18%), Positives = 213/649 (32%), Gaps = 116/649 (17%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 A A+ E L +I + D Y++ V D YD++ RL + +R S + Sbjct: 2 AADARAEAQGLTTRILELRDAYYELDTVLVSDEEYDRMLRRLEELERLHPELQSQDSPTQ 61 Query: 81 DVMM---PPLNGAVMHPVAHTGVRKMVDKNALSLWMR-------ERSDLWVQPKVDGVAV 130 V L V H + + A W R D + K+DG+A+ Sbjct: 62 TVGGRAQTTLFAPVEHAERMLSLDNVFSFEAFEAWAAKIERDAGRRVDYLCELKIDGLAI 121 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP---LANSTLQGEIFLQREG 187 L Y +G L A +RG+G+ GED T+ + I A+ Q +SG ++GE+F Sbjct: 122 NLRYENGVLVTAATRGDGVVGEDVTENIRHIPAITQRLSGAGPFPPVVEVRGEVFFPVAK 181 Query: 188 HIQQQMG--------GINARAKVAGLMMRQ----------DDSDTLNSLGVFVWAWPDGP 229 + NAR +G + ++ D L L + V P Sbjct: 182 FEELNANQQAAGERVFANARNAASGSLRQKAEGKNPAQRRLMRDRLGRLRMLVHGIGAWP 241 Query: 230 Q----LMSDRLKELATAGFTLTQTYTRAVKNADEVARVR--NEWWKAELPFVTDGVVVRA 283 S + L + G + + R E A + + + DGVV++ Sbjct: 242 NPPVATQSGVYELLRSWGLPTS-AHGRVFGTVQEAADFIGRSAERRDTVEHEIDGVVIKV 300 Query: 284 AKE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDK 341 + + W +A+KY P ++ I +VG++G+ + A + V + Sbjct: 301 DELVLHDELGATSRAPRWAIAYKYPPEQVNTKLLDIVVSVGRTGRATPFAVMEKVKVAGS 360 Query: 342 KVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT--KPTPPENRFNS 399 +V++ + + + + GD +++ AG IP + V + T + P + Sbjct: 361 EVRQATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELRDGTEREFAMPTDCPEC 420 Query: 400 -----------LTCYFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHR--- 444 + + C Q R+ +G++ L ++ +GE AL Q Sbjct: 421 GTPLAPAKEGDIDLRCPNAEFCPAQVRGRVEHIGSRGGLDIEALGEVAAAALTQPRFPER 480 Query: 445 --FEHIFSWLLLTPEQL-----------QNTPGIAK------------------------ 467 L E L P + + Sbjct: 481 APLPTEAGLFGLRLEDLFPIEVVVRDSETGLPKLTETGVEKVDAPFRRRRQKKDGAFDPE 540 Query: 468 -------------SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 + +L AR +P R ++++ I A A S Sbjct: 541 AEAFDGDEIAVPSKSAIELLANLRAARTKPLWRILVSLNIRHVGPVAARALADHFGSLDA 600 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + ++ + G G A V+ W E ++ A + P Sbjct: 601 IRAASRDELAAVDGVGGIVADAVLSWFEIGWHCEIVENWARDGVQFAIP 649 >UniRef50_C3XES8 NAD-dependent DNA ligase LigA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XES8_9HELI Length = 686 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 109/605 (18%), Positives = 209/605 (34%), Gaps = 76/605 (12%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSE 78 ++ EE + + + Y++ D YD L + ++ S Sbjct: 1 MQEIKSHEEYLESIKTLNLYAKHYYELDDPIASDFEYDMLYKAVKLYEENNIDKIAKDSP 60 Query: 79 PRDVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMR---------------------- 114 + + L H + + + + L W+ Sbjct: 61 TQRIGDKILKDFSKNKHKKRMWSLEDIFNPSDLDEWLTKLSNAIARVQKTTLSPTLFDTE 120 Query: 115 ------ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV 168 + PK DG+++ L+Y +G L A +RG+G GE TQ + ++P T+ Sbjct: 121 TQIDSINNLAFCISPKYDGMSLNLLYENGILQSATTRGDGEIGEVVTQNAKTLHSLPHTI 180 Query: 169 SGPLANSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNS-LG 219 + ++GE+ L +E + N R AG M + D + T L Sbjct: 181 PFK-GSIEIRGEVVLSKENFARLNKEQERNNKALFANPRNAAAGSMRQLDSNLTRERNLS 239 Query: 220 VFVWAWP--DGPQL----------MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW 267 W D +L D L L GF+ + R NA+ + R + Sbjct: 240 FVAWGIGSVDMKELEKYAKRSNLGFYDMLMLLPEFGFSPFRYLERV--NAESIEREYQKI 297 Query: 268 W--KAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGK 323 + PF+ DG V+ + + A+K+ V +++I VG+ Sbjct: 298 LNDRDNYPFMLDGFVIVLDDLALQDKLGFTQKAPRFACAYKFPATEVVINIESITPQVGR 357 Query: 324 SGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR 383 +G I+ VA+ P LD + R + + + + DI D L+ +G IP+I V+ Sbjct: 358 TGIITPVANFKPTPLDGAFISRATLHNYKEIDQKDIRIRDYCLLVRSGDVIPKITKVLHE 417 Query: 384 GAERTK-----PTPPENRFNSLT-----CYFASDVCQEQFISRLVWLGAKQVLGLDGIGE 433 + + PT + L+ Y + C ++L+ +K+ + +DG+G Sbjct: 418 RRKGDEIKIAKPTHCPICSHELSYEDIYIYCTNPNCDAIIKAKLIHFASKKCMDIDGLGS 477 Query: 434 AGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA-RKQPFTRWVMAM 492 + L + L E G + K+ L + + + F R++ A+ Sbjct: 478 SIIELLVDNGVIKECKDIYSLKEEDFLRFEGFKEKKAQNLINAIKDSIENREFWRFIHAL 537 Query: 493 GIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW-KENAQIKKLGSWLA 551 GI + ++ + Q++ G G A+ ++ N + Sbjct: 538 GILHIGEVASKKLASYGYEIFDYDIEKLQEIEGFGKDMAQSFYDFCIHNKDFINEMQEIL 597 Query: 552 AQQIT 556 Q+ Sbjct: 598 KPQLQ 602 >UniRef50_C4G8W2 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8W2_9FIRM Length = 675 Score = 528 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 121/588 (20%), Positives = 218/588 (37%), Gaps = 61/588 (10%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMP 85 E L QI D Y+ + K+E+ D YDQL +L + S + + Sbjct: 4 ETYQELIDQINYHMDLYYNQDKTEISDYEYDQLMQQLKAAEAEHPDWVRPDSPSQKIGGT 63 Query: 86 P---LNGAVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGVAVTLVYRD 136 V H V + + D ++ W+++ + V+ K+DG+++TL YR Sbjct: 64 TKREAGVKVEHNVPMLSIEDVFDFQSVIDWVKKVQEMHPDAIFSVEQKIDGLSMTLRYRK 123 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG-- 194 G+L A +RG+G GED TQ I VP + L+GE+++ R+ Sbjct: 124 GRLELAETRGDGHIGEDVTQNARAIPQVPDKLPITDPYLELRGEVYMTRDRFEAYNARQE 183 Query: 195 ------GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG----PQLMSDRLKELATAG 243 N R AG + + D T L +F++ DG + D L L+ G Sbjct: 184 KDEKPLAANPRNLAAGTLRQLDPGITAKRGLALFIFNVQDGEPHFMRSQLDNLDRLSAMG 243 Query: 244 FTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHWLPGQAEWL- 300 + TY + NA EV E + +L + DG VV+ + + + G Sbjct: 244 LPV--TYHKRADNAKEVIAAIEEIGKMRDQLGYDIDGAVVKIDQIAYRKDFPAGAKYSAG 301 Query: 301 -VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA------PVMLDDKKVQRVNIGSVRR 353 +A+KY P +V E+ I VG++GK++ P L V R + + Sbjct: 302 HIAYKYPPEERVVEMDQILVDVGRTGKLTFTGQFHDVKTGGPARLCGTSVSRATLHNQDY 361 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWR-GAERTKPTPPENRFNSL-------TCYFA 405 ++ I G + +G+ IP+++ V A P L Sbjct: 362 IRQMKIGIGGHYKLFKSGEIIPKLNGCVKEPKAVFKAPQFCPVCGEELEQEEGTADIRCV 421 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH-------RFEHIFSWLLLTP-- 456 + C Q + + + + + G+G+ AL Q L Sbjct: 422 NPSCPAQISRTIAYFAGRSCMDIAGLGQTLVDALCQEKITGSETFYLTSYVDIYRLREHR 481 Query: 457 EQLQNTPGIA-KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQL 512 + L + + + + ++ ++ Q TR + +GI AA + L Sbjct: 482 DSLISRGILGKEKNTDKILAAIEDSKSQRPTRLLAGLGIRNVGLSTAAALMAVYPDLMDL 541 Query: 513 LFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + + + Q +P G A ++ + + +++ + A +T P Sbjct: 542 MHAGFEDLQGIPDIGEKTAADIVHFFAHEDKRRMMADFRALGLTMRMP 589 >UniRef50_UPI0001C379D5 DNA ligase, NAD-dependent n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C379D5 Length = 685 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 102/579 (17%), Positives = 204/579 (35%), Gaps = 45/579 (7%) Query: 20 AVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC----- 74 A P + L + + + D Y+ G + D YD+L L + ++ Sbjct: 29 ATPPKEVNMDKINRMKELNELLAKAADSYYNTGVEIMSDHEYDELYDELEKLEKETGVIL 88 Query: 75 FGSEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTL 132 GS + V + V H + K + L+ W+ K+DG+ + L Sbjct: 89 NGSRTQQVGFEVASSLTKVKHTSRMLSLDKTKSIDELTEWLGGHEGFL-SWKLDGLTLVL 147 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 + +G L +A++RGNG GED T I +P + + ++GE ++ + + Sbjct: 148 TFDNGTLTQAVTRGNGETGEDITMNARHIIGIPAKIPFE-GHLVVRGESLMKYKDFERVN 206 Query: 193 M------GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAW----PDGPQLMSDRLKELAT 241 N R G + D T + F + ++R++ L + Sbjct: 207 SLIEDGSKYKNPRNLCVGTVRNLDSKVTAERNINFFAFNLVSADGYESNSFAERIQWLNS 266 Query: 242 AGFTLTQTYTRAVKN---ADEVARVRNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQ 296 GF Y V + A++VA + E F +DG+V+ Sbjct: 267 LGFQTV--YGVKVDSSVLAEKVAEFEKDIVNNE--FPSDGLVLMLDDVAYGRSLGETSHA 322 Query: 297 AEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE 356 +A+K++ ++ I+++ ++G ++ VA PV L+ V R ++ +V ++ Sbjct: 323 PRNGMAFKWRDETADTTLREIEWSASRTGLLNPVAIFDPVELEGTTVSRASVHNVSIVKQ 382 Query: 357 WDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS----------LTCYFAS 406 + GD + + A IP++ + A P T + + Sbjct: 383 LKLGIGDTLSIYKANMIIPQVLENKTGSASAAIPEVCPICGEKTEIKTSDDDVETLFCTN 442 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPG 464 C + I R + + + G+ A + + L E++ G Sbjct: 443 KECPAKHIGRFEHFVQRDAMNIVGLSTATIETFVSEGFVKKYSDFYHLDRFREKIVTMEG 502 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAA---LNASDERSWSQLLFSTEQFWQ 521 + ++ +R +R + A+GIP A L ++ + + T + Sbjct: 503 FGERSYQKMQEAVEASRHTEMSRILYAVGIPNIGRAASRLICAEYPDVNAIEKLTAEELT 562 Query: 522 QLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + G G A +++ N L + + EP Sbjct: 563 AIDGIGEVLANDYVKFFANEDNLTEYHELLTE-LDIAEP 600 >UniRef50_C4UL89 DNA ligase B n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UL89_YERRU Length = 569 Score = 523 bits (1349), Expect = e-147, Method: Composition-based stats. Identities = 229/566 (40%), Positives = 352/566 (62%), Gaps = 9/566 (1%) Query: 1 MKVWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV 60 M ++A+++G + Q++ + CP WS EI+++++Q QWD Y ++G S ++D + Sbjct: 3 MMRFIAVMLGWVICQAATASECPEWSEHELVTEIAKMEEQFGQWDKAYHQQGNSLIDDDI 62 Query: 61 YDQLSARLTQWQRCFGSEPRDVMMPP-----LNGAVMHPVAHTGVRKMVDKNALSLWMRE 115 YDQL RL+ W+ C + V ++ V HPVAHTG++K+ A S W+ Sbjct: 63 YDQLHQRLSHWKSCVKALEPAVNSHITALAGVSDKVTHPVAHTGLKKLTGNLAASEWILA 122 Query: 116 RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS 175 R +LWVQPKVDGVAVTL Y G L + ISRG+G++G+DWT K ISA+P +S Sbjct: 123 RKNLWVQPKVDGVAVTLTYLQGHLTQVISRGDGVRGQDWTDKAQYISAIPSLISPAPPLL 182 Query: 176 TLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDR 235 L GE+FL+ H Q+ GGINARA VAG +MR+ S L+ +GVF+WAWPDGP M ++ Sbjct: 183 VLHGELFLRVHDHRQKDSGGINARASVAGALMRKSPSSLLSQIGVFIWAWPDGPASMVEK 242 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPG 295 L+ L GFTL++ ++ + + + R W+++ LPFVTDG+V+R +EP +W Sbjct: 243 LRTLHRMGFTLSEEFSVPITSFTDAVHWRKIWFQSPLPFVTDGIVIRQEEEPAGHYWQSQ 302 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +AWKY P Q+A+VK++ F +G++GKIS V L+P+ LDDK V+ VN+G+V RW+ Sbjct: 303 PGYWSIAWKYPPFQQMAQVKSVNFTIGRTGKISAVLHLSPIKLDDKWVKGVNLGTVARWK 362 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE-NRFNSLTCY-FASDVCQEQF 413 W++ PGDQ++VSLAGQGIPR+D V WR +R + + P+ ++F++ +C+ S +C+ QF Sbjct: 363 RWNVLPGDQVIVSLAGQGIPRLDKVAWRVDKRDEISTPDMDQFHTFSCFRRESTLCETQF 422 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQL 473 I+RL WL + L + GI W+AL + SWL LTPE + PGI + K+ ++ Sbjct: 423 IARLTWLSGRSGLDMLGISSGIWQALTAHGLMGDLASWLELTPEIIATVPGIGEVKANKI 482 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQ 533 + QF A+ +PF W+ A+G P +AA+N ++W+ L W + G+GR +Q Sbjct: 483 YLQFQKAKTRPFISWLAALGFP--KAAINPRVPKTWAALQQQPRGEWLTMANIGAGRLKQ 540 Query: 534 VIEWKENAQIKKLGSWLAAQQITGFE 559 + E+ + ++ +L LA Q+ GF+ Sbjct: 541 ITEFTTHPEMLQLAERLAYHQVQGFK 566 >UniRef50_D1J7Y7 NAD(+)-dependent DNA ligase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7Y7_MYCHP Length = 668 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 114/579 (19%), Positives = 219/579 (37%), Gaps = 52/579 (8%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF---------- 75 + ++EI LQ +I WD+ Y+ EV D +YD +L + + Sbjct: 6 DIEKIRKEIFDLQAKISAWDNAYYNLDSPEVPDEIYDVEFNKLKALEEKYASFFSDEELK 65 Query: 76 GSEPRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDG 127 S R + L V H + K + + ++ +++PK+DG Sbjct: 66 NSPTRKINALASDLFKKVKHKRPMLSLNKAYSLDEIQKFIDNIKKITSDFSFFIEPKIDG 125 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREG 187 ++++++Y DGKL +AI+RG+G+ GED T V +S +P+T+ + ++GE++L Sbjct: 126 LSISIIYEDGKLVRAITRGDGITGEDVTANVVQMSCIPKTIEYK-ESLEVRGEVYLAISD 184 Query: 188 HIQQQ--------MGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG----PQLMSD 234 + N R AG + + + L F++ D + M + Sbjct: 185 FEKLNLKLGQENKNKLANPRNAAAGTLRQLNSQIIKERNLSAFLYYVVDPLQHNIKTMQE 244 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAEL--PFVTDGVVVRAAKEPE--SR 290 + L T GF +T ++ + +L + TDGVV++ + Sbjct: 245 EHEFLKTYGFPVTHEVQH-ANTLQDIEEYIRNFKNQKLLIDYETDGVVIKLNEVQYFDKL 303 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 + +A+KY+P + +K I VG++G ++ A L PV + V + + Sbjct: 304 GSTAKFPHYAIAFKYEPNVETTTIKRIYATVGRTGLVTYNAELEPVEISGSLVSFATLNN 363 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS----------L 400 + ++ ++ D + + AG+ IP + ++ E E L Sbjct: 364 FQYIKDLNLNENDLVYIKKAGEIIPCVIGLISGKKEIDHFQKVEFCPYCHNKLVDSETGL 423 Query: 401 TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQ 458 + ++D C E +L+ +K L ++ +GE + + L + Sbjct: 424 EQFCSNDQCPEIQRRKLIHFCSKDGLDINTMGERNIDLFLKNSLISNPIDIFNLKNKKQD 483 Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 L + + + + + +P + + A+ IPL A AS +S LL Sbjct: 484 LLKLNRMGEKSIENILISIDECKNKPLYKMISALSIPLIGVKLAKFVASKIKSLHNLLNY 543 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQ 554 G +I W N KKL + Sbjct: 544 DFSQLIDYHEIGDKIINSIISWISNDFNKKLVEDIINLG 582 >UniRef50_A7AXK5 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AXK5_RUMGN Length = 663 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 101/566 (17%), Positives = 204/566 (36%), Gaps = 47/566 (8%) Query: 25 WSPARAQ--------EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG 76 + + Q + I L +Q+ ++ D Y+ E +S+V D YD+L L++ + G Sbjct: 3 MNEEKMQRSDLMDKVKRIKELVEQLNEYRDAYYNEARSDVSDAEYDRLFDELSELENETG 62 Query: 77 -----SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVA 129 S + V + V H + K + L + D + K+DG+ Sbjct: 63 VVYTNSPTQSVGYEVKSELEKVKHSHPMLSLDKTKSVDDLVKFA-GDKDCILSLKMDGLT 121 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI 189 L Y +G+L +A +RG+G GE T + +P ++ + ++GE + E Sbjct: 122 CLLTYENGELVQAETRGDGEIGELITHNAKVFENIPLSIDYK-GHFEIEGEAIITYEDFD 180 Query: 190 QQQM------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP--DGPQLMSDRLKELA 240 + N R +G + + D + W P +RL+ Sbjct: 181 KINKSLPDDKKYKNPRNLASGSVRQLDSKIAAQRHIKFIAWKVPTDIASSSFINRLQYAL 240 Query: 241 TAGFTLTQTY-TRAVKNADEVARVRNEWWK--AELPFVTDGVVVRAAKEPES--RHWLPG 295 GF R NA+ + V + K E F DG+V Sbjct: 241 DIGFDTVPFLPIRGNCNAEFINIVVEQLRKRAKEKSFPIDGLVATYNDITYGESLGMTGH 300 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 + +A+K+ ++ ++ I++++GK+G ++ VA V L V R ++ ++ + Sbjct: 301 HPKHSIAFKFAEDSEETVLREIEWSIGKTGTLTPVAIFDSVDLAGTSVSRASLHNISIMK 360 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLT---------CYFAS 406 E +I+ G + V + IP+I + PT + Sbjct: 361 ELNISIGSTVTVVKKNEIIPQIISCDANAMDADIPTTCPVCGGETRIVKENDSEVLMCVN 420 Query: 407 DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPG 464 C+ + + R+ +K+ + + G+ E + L + I L ++L G Sbjct: 421 PHCKGKLLGRVSHFVSKKGMDISGLSEETIKKLIELGWITEITDIYNLDQYYDRLSTMSG 480 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQ--F 519 K +L ++ +++ ++ +P + +W + ++ Sbjct: 481 FGKKSVDKLRTSIENSKTVRLDKFIASLSVPGIGTSQSKELVKAFGTWDKFRDASVGYYD 540 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKK 545 + QL G G + W E+ Sbjct: 541 FTQLDGFGDVLNNNIHSWFEDMSNIA 566 >UniRef50_Q058C9 DNA ligase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=DNLJ_BUCCC Length = 587 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 118/579 (20%), Positives = 230/579 (39%), Gaps = 57/579 (9%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR------- 80 +I +LQ QIK + Y + D +YD+L +L Q ++ + + Sbjct: 2 KDIYNQILKLQLQIKYHNYMYHTLDSPIISDILYDELYNKLLQLEKLYFKKKSLDKKIKL 61 Query: 81 --DVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRERSDLW---------VQPKVDG 127 V L+ H + +R + + + L+ ++ + + K DG Sbjct: 62 LDQVGAKKLHIFTEFFHKIPMLSLRSINNISDFDLFDKKIKEYFKHINVITYFCDFKFDG 121 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGEIFLQR 185 +AV L Y++G L A +RGNG GE+ T+ + +IS++P+ ++G ++GEIF+++ Sbjct: 122 LAVNLFYKNGILISASTRGNGSVGENITKNILMISSIPKKIAGSNIPKKIEIRGEIFMRK 181 Query: 186 EGHIQQQ--------MGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWP-----DGPQL 231 N R AG + + + L FV+ + Sbjct: 182 SDFFILNQSCKLSGKKEFSNPRNAAAGSVRQLNPEIVKKRKLNFFVYGFGLFDYNKKIDS 241 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES 289 RL ++ GF L + Y KN EV + +++L F DG+V++ Sbjct: 242 HYQRLLQIKKWGFPLYKNYC-VCKNKKEVIHFYHYANKIRSQLDFEIDGIVIKLDSIKLQ 300 Query: 290 --RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 + +W +A K+ + + ++ I F VG++G I+ VA P+ L + + + Sbjct: 301 NNLGCIEKYPKWAIALKFFSLDKETKIFKISFKVGRTGIITPVAYFFPINLFGVSISKAS 360 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER--TKPTPPENRFNSL----- 400 + +++ + DI D + V AG IP+I +V+ + K P + Sbjct: 361 LYNIKTIKLLDIRLHDYVTVYRAGDVIPKIRNVLIHKRNKYTQKIIIPTYCPSCCTKLIF 420 Query: 401 -----TCYFA-SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL 454 TCY S C Q + RL++ +K L G+G+ L + L Sbjct: 421 SDDLKTCYCPASFSCFSQNVKRLIYFSSKNGLNFKGLGKKNIIKLINYGYLYTPIDFFSL 480 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 T ++L+N + S ++ +++ +++ ++GI A A RS + Sbjct: 481 TVKKLKNIFRMGDKLSEKIIKNIAFSKRVSLDKFICSLGIFGVGTSIAKRLAYYYRSVEK 540 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWL 550 + ++ G + +I + +N + + L Sbjct: 541 FFNTNYDTLSKIDHIGYNISNAIISFLKNKSNRSIILKL 579 >UniRef50_B1ZMR3 DNA ligase 2 n=1 Tax=Opitutus terrae PB90-1 RepID=DNLJ2_OPITP Length = 708 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 122/611 (19%), Positives = 237/611 (38%), Gaps = 58/611 (9%) Query: 2 KVWMAILIGILCWQSSVWAVCPAWSPARAQ----EEISRLQQQIKQWDDDYWKEGKSEVE 57 ++ + +G++ C A S + A+ + L+ +I + DD Y+++ + E+ Sbjct: 11 RLALGASLGVVALTVIPNLSCAARSVSVAETESLRRLELLRVEIARHDDLYFRKAQPEIS 70 Query: 58 DGVYDQLSARLTQWQRCF-------GSEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNA 108 D YD L L + + F + RD+ ++G H + + K ++ Sbjct: 71 DADYDALKQELRELESRFGRRVPRDPAALRDMGDDRVSGFPKARHRMRMLSLEKTTTESG 130 Query: 109 LSLWMRERSD---------LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVS 159 + + + V+PK DG+A++ Y +G+L + ++RGNG +G+D T Sbjct: 131 VRAFDQALRRLVKPPAEIAYVVEPKFDGLAISATYEEGRLVRLVTRGNGEEGDDVTAAAG 190 Query: 160 LISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQ 209 I +P ++G ++GE+FL + G + R G + Sbjct: 191 RIRTLPPRLAGAAWPRVVEVRGEVFLTFAEFERINRGRRENGRPTFSSPRNLAVGTLKSL 250 Query: 210 DDSD-TLNSLGVFVWAWPD-----GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARV 263 + D + L V + P + L+ +A G + R V + D+ R Sbjct: 251 EPEDREVRQLDVVFFGLGAIDGHAAPASQTQLLEWIAQWGLPSVEDARR-VDSIDDAWRA 309 Query: 264 RNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQF 319 E ++ L F DG V++ W +A+KY P V+ + Sbjct: 310 VQELGGRRSHLAFPIDGAVIKLDDAVGQTAAGVSEVAPRWAIAFKYAPARVGTRVRGVAL 369 Query: 320 AVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDD 379 VG++G I+ VA L PV L ++ R + + + D+ GD + + G+ IP + Sbjct: 370 QVGRTGVITPVAELEPVALAGARITRATLHNASEMERSDLRVGDFVWIERMGEIIPAVVA 429 Query: 380 VVW--RGAERTKPTPPENRFNS----------LTCYFASDVCQEQFISRLVWLGAKQVLG 427 V RG P + +D C + + ++ + + +G Sbjct: 430 VDTAQRGTVSAPFVFPRDCPGCGALLVRALDDANWRCTNDDCPARQVRKVEHYVSDEGVG 489 Query: 428 LDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTR 487 + G+G A AL ++ R I LT ++ ++ +++A++ +RK P R Sbjct: 490 IRGLGAASVEALVRSQRVREIPDLYTLTAAEVTAHTRLSAAQAARVVDAIQRSRKAPLRR 549 Query: 488 WVMAMGIPLT---RAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIK 544 + +G+P A + Q + E QQ+ G R + + + Sbjct: 550 VIAGLGLPGIGPAGANALGARFADLPQFAAARESDLQQVEGLRPESVRALATALSAERTQ 609 Query: 545 KLGSWLAAQQI 555 +L + LAA + Sbjct: 610 QLLARLAAAGV 620 >UniRef50_B1J2Z7 DNA ligase B n=16 Tax=Pseudomonadaceae RepID=LIGB_PSEPW Length = 567 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 211/548 (38%), Positives = 326/548 (59%), Gaps = 7/548 (1%) Query: 15 QSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC 74 + + CP WS +A+ E+++L+ + WDD Y ++G + V D +YDQ L Q+C Sbjct: 16 SIAQASHCPDWSTKQARTEVAQLRATLANWDDHYHRQGIALVADELYDQARHHLLHLQQC 75 Query: 75 FGSEPRDV-MMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLV 133 FG E D + G + HPVAHTGV K+ D A++ WM + +WVQPKVDGVAV+LV Sbjct: 76 FGQEFTDPSPLASARGPIAHPVAHTGVEKLHDAAAVARWMTGKKGVWVQPKVDGVAVSLV 135 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM 193 YR G+L + +SRG+GL+G DW++ + + ++ + + PL + LQGE++L+ + H+Q + Sbjct: 136 YRQGRLVQLLSRGDGLQGHDWSRHIKDLDSITRQLPQPL-DVVLQGELYLRLQAHVQAEA 194 Query: 194 GGINARAKVAGLM-MRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTR 252 G N R VAG++ +Q + S+G+FVW WP GP +RL +LA GF +Q ++ Sbjct: 195 GSSNVRGTVAGMLARKQLGPEPGASIGLFVWDWPHGPDNQGERLTQLAAWGFPDSQRFST 254 Query: 253 AVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVA 312 A+ +E R W+++ LPF TDGV++R P + W P W+ AWKY +A Sbjct: 255 AIDTPEEATHWRLHWYRSPLPFATDGVILRQDSRPPADRWQPNAPYWIAAWKYPFAQALA 314 Query: 313 EVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQ 372 EV+ ++F +G++GK++ + L PV LDD+++ +V++GS+ RW+ DI PGDQ+ +SLAG Sbjct: 315 EVREVRFLIGRTGKVTPLLRLKPVTLDDRRISQVSLGSLARWRALDIRPGDQVAISLAGL 374 Query: 373 GIPRIDDVVWRGAERT-KPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGI 431 IPR D VV R ER P P ++ +C+ ASD CQEQFI+RLVWL KQ L + G Sbjct: 375 TIPRFDQVVHRAVERQVLPVPEAEQYGQHSCWQASDGCQEQFIARLVWLSGKQGLAMPGT 434 Query: 432 GEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMA 491 G+ W+ L Q + WL L +QL + PGI++ + QL F++ R +PF +W Sbjct: 435 GKGTWKRLVQAGLVTSLTDWLTLDAQQLLSVPGISRKTATQLQRSFDIGRNRPFAQWRKG 494 Query: 492 MGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLA 551 +G+P A + +W L + WQ LPG G+ RA Q+ + + Q++++ + L Sbjct: 495 LGVP---APAQVPRDENWQTLAGRSASDWQTLPGIGATRATQLANFFTHEQVQRIATLLG 551 Query: 552 AQQITGFE 559 + I GF Sbjct: 552 TRGIDGFH 559 >UniRef50_Q83G99 DNA ligase n=2 Tax=Tropheryma whipplei RepID=DNLJ_TROWT Length = 628 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 110/622 (17%), Positives = 212/622 (34%), Gaps = 95/622 (15%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP 85 I L QI Y++E S + D YD L L + G R+ Sbjct: 4 PDGDLDRRIELLTAQIIAARKAYYQENTSLMSDVEYDALEHELKDAEHAKGFSDRNSPSL 63 Query: 86 PLN--------GAVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVDGV 128 + V H + + + L W + + K+DGV Sbjct: 64 TVGIAAQLNLFEPVKHIEPMLSLDNVFSLDQLHSWYEKTKKICPEGDQCTFVCELKIDGV 123 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 V+L Y +G L A +RG+G GED TQ + + ++P ++ ++GE F++R+ Sbjct: 124 GVSLRYANGYLISAATRGDGAIGEDITQNMLYVPSIPPRIAL-PGIFEIRGEAFIKRDEF 182 Query: 189 IQQQ-------MGGINARAKVAGLMMRQDDS-DTLNSLGVFVWAWPD-------GPQLMS 233 + N R V+G + + + L S+ + + G L S Sbjct: 183 DRINQLSLERSKQFANPRNFVSGCIRTKTPNMRYLESISFYAHGFTQVYGYTSGGMNLHS 242 Query: 234 D-----------------RLKELATAGFTLTQTYTRAVKNADEVARVRNEWW--KAELPF 274 D L+ + +Y R N E+ + +P+ Sbjct: 243 DITASGGVKTEIEHGMFSAYSRLSECKIPVN-SYNRLCTNFSEIESYIENIRLNRQCVPY 301 Query: 275 VTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVAS 332 DG+VV+ + W VA+K+ + V + I+ +VG++G+++ A Sbjct: 302 AIDGIVVKIDSLQKQALLGSTTKAPRWAVAYKFPSESTVTRLLDIEVSVGRTGRVTPYAV 361 Query: 333 LAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK--- 389 L P+ LD +V R + + + + D+ GD + + AG +P + + + ++ Sbjct: 362 LQPIQLDGSEVSRATLHNQKVIGDKDLLIGDYVRIRKAGDIVPEVLCALPEKRDGSEVLF 421 Query: 390 --PTPPENRFNSL--------TCYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRA 438 P+ + L + C Q RL ++G++ VL + + E A Sbjct: 422 KMPSLCPSCGAELMPSKLGDIDLRCPNMQSCLVQLAGRLEYIGSRGVLDIAYLAEENAYA 481 Query: 439 LHQTHRFEHIFS--WLLLTPEQLQNTP------------GIAK---------SKSAQLWH 475 L +F +T + L + + Sbjct: 482 LSHLRKFGKSAEVQLFKITIDDLVALEFMYKGNMRSPFRKKGDSFPGFEEPTKSAQDMVD 541 Query: 476 QFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRAR 532 A++ P ++++A+ I A A S ++ + ++ G A Sbjct: 542 SIERAKRSPLWKFLLALNIRHIGPASAKALADHFGSIESIINAKIDELLKVRSLGETIAI 601 Query: 533 QVIEWKENAQIKKLGSWLAAQQ 554 V +W + +L + + Sbjct: 602 SVHDWFRDPWRVELVNTWRSDG 623 >UniRef50_Q5YVN7 DNA ligase 1 n=2 Tax=Actinomycetales RepID=DNLJ1_NOCFA Length = 663 Score = 519 bits (1338), Expect = e-146, Method: Composition-based stats. Identities = 116/566 (20%), Positives = 212/566 (37%), Gaps = 44/566 (7%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------EPRDV 82 A E I L +I + Y+ EG V D YD + L V Sbjct: 2 DAGERIRELADRIVELRTAYY-EGAPLVADAEYDAVEDELRALIAAHPELAPDPNPLDQV 60 Query: 83 MMP-PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--LWVQPKVDGVAVTLVYRDGKL 139 P L+ V H + K ++ + + V PK+DG+++ LVY DG+L Sbjct: 61 GAPAVLHAPVRHSRPMLSLEKATTPEQVAAFFERFPGQPVVVMPKLDGLSLALVYEDGRL 120 Query: 140 NKAISRGNGLKGEDWTQKVSL-ISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ-----M 193 +A++RG+G G+D T V + VP+ + ++GE + R + Sbjct: 121 VRAVTRGDGTTGDDVTMLVRALVDGVPEQIDV-PGRVEVRGEAVMLRSTFLAYNAAHPDK 179 Query: 194 GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPDGPQLMSDRL-KELATAGFTLTQTYT 251 IN R AG + +D + L F + + L + L G + Sbjct: 180 PLINPRNAAAGTLRAKDPATVAERRLRFFGFDLDTAEGGAAADLGEGLRALG--IAGAAM 237 Query: 252 RAVKNADEVARVRNEWWK--AELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAWKYQP 307 R +A++ + + +L + DG V+R A +A+K+ Sbjct: 238 RMCADAEQAQAAITDIERGRNDLDYDIDGAVLRLADRDAYAAAGTRSNSPRGALAFKFAA 297 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 + ++A+ + VGK+GKI VA L PV + V + + + + + DI GD +LV Sbjct: 298 EEKTTVLEAVTWDVGKTGKIVPVARLEPVFVGGTTVTKATLANQQVIRARDIKVGDTVLV 357 Query: 368 SLAGQGIPRIDDVV---WRGAERTKPTPPENRFNS----------LTCYFASDVCQEQFI 414 AG IP + V+ R + PP + + + C Q + Sbjct: 358 RRAGDVIPFVAGVLDASKRTGAEVEIVPPTECPSCGQPVTEQGNSRELFCTNASCPAQTV 417 Query: 415 SRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLW 474 RL+ ++ +D IG L + E+ + LT E+L I + + ++ Sbjct: 418 RRLIHWASRAAADIDAIGGVWIERLAEAGILENPSDFYTLTKERLLEFDRIGEVSATRMI 477 Query: 475 HQFNLARKQPFTRWVMAMGIPLTRAALNASD----ERSWSQLLFSTEQFWQQLPGTGSGR 530 + +R R ++ + IP+ A S ++ + E+ + G Sbjct: 478 ESIDRSRDVGLRRALIGLAIPMASEGTAARLARAGFASLEEVADAGEERLVAVEDIGPKV 537 Query: 531 ARQVIEWKENAQIKKLGSWLAAQQIT 556 A ++E +++ L + ++ Sbjct: 538 AASLVEHLT--RLRPELERLRERGVS 561 >UniRef50_Q6KI95 DNA ligase n=1 Tax=Mycoplasma mobile RepID=DNLJ_MYCMO Length = 671 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 94/578 (16%), Positives = 222/578 (38%), Gaps = 49/578 (8%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPR 80 R E + L+ +I W+ Y+ + VED +YD +L +++ + S + Sbjct: 13 NNRIISEYNDLKNKINLWNKAYFDYDEPLVEDSIYDATLLKLIKFENQYKFLDNSDSPTK 72 Query: 81 DVMMPPLN--GAVMHPVAHTGVRKMVDKNALSLWMRER------SDLWVQPKVDGVAVTL 132 ++ V H + K + L ++ R + +++ K+DG++++L Sbjct: 73 NIGAKVSKKFSKVQHQFPMLSLNKAYKFDDLKIFERHINKLGFFPNYFLELKIDGLSISL 132 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 Y +G L +A++RG+G+ GED T+ V I +P+ + ++GEI+L + + Sbjct: 133 KYDNGNLIQALTRGDGISGEDVTENVFQIQDIPKQIKYS-KPIEIRGEIYLSKSTFYEIN 191 Query: 193 M--------GGINARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDG----PQLMSDRLKEL 239 N R +G + + D S L F ++ + + +D+ L Sbjct: 192 ECQKSQNLTIFANPRNAASGSLRQLDSSIVKERKLNSFFYSVTNPLDHKIKNFNDQELFL 251 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEW----WKAELPFVTDGVVVRAAKEPES--RHWL 293 F + + + V ++ ++ ++ +L + DG+VV+ Sbjct: 252 KENNFQV-PSLNKFVDTIEKAYEFIKDFEKNNYREKLNYEIDGIVVKVDDFSLYDILGQT 310 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 ++A+K+ ++ ++ I +VG++GKI+ A L PV+++ V + + Sbjct: 311 SKFPRSMIAFKFSDISIETKLIDIFISVGRTGKITYNAILEPVIINGTLVSAATLHNYEY 370 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE----RTKPTPPEN-----RFNSLTCYF 404 + + D + + AG+ IP++ + + +E R + N + + Y Sbjct: 371 VESLKLNKNDNVKIIKAGEIIPKVVSLSKKNSETIFKRIEYCTSCNEKLVQPEDEVDQYC 430 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQ--LQNT 462 + C + ++ +K+ + + G+G + L + +++ Sbjct: 431 INKKCLMIRLRKIEHFASKKAMNILGLGFQNIEKFFKLGILTKYSDLFFLEKYKNLIESQ 490 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 P + L N ++ +++ A+GI A L A++ + S L+ + Sbjct: 491 PSFGEKSFNNLIESINRSKSNSLEKFIFAIGIKQIGERSAKLIANEVKLLSNLINFDFEK 550 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 + + + + + + + Sbjct: 551 LNNIRDISCKTINSLKCFFSDENEIEEIKIILELGLDF 588 >UniRef50_B1BD54 DNA ligase, NAD-dependent n=2 Tax=root RepID=B1BD54_CLOBO Length = 649 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 102/569 (17%), Positives = 207/569 (36%), Gaps = 42/569 (7%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-----GSEPRDV 82 + + L +++ + D Y+ K+ + D +D L Q ++ S + V Sbjct: 2 EDKTQRVKELIKELNEASDKYYNSDKTTMIDKEWDDKFDELKQLEQETEVILSNSPTQKV 61 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLN 140 + V+H + + K + L ++ ++ + K DG+ L+Y +G+L Sbjct: 62 GYEVKSKLDKVVHNIPLKSLGKTKSIDDLQKFIGNN-EILIMDKGDGLTCELIYDNGQLL 120 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG------ 194 + +RGNG GED T V +P + L GE + E Sbjct: 121 QGSTRGNGEIGEDITHNVKTFKNIPLQIDFK-GYLKLSGESVILDEDFELINAKLDEEDK 179 Query: 195 GINARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDG----PQLMSDRLKELATAGFTLTQT 249 N+R VAG + + D ++ + ++ + + ++L+ L+ GF + Sbjct: 180 YSNSRNLVAGSVRQLDSKICDKRNVRFYAFSLLECGEAEFKTKEEQLEFLSRLGFETIEY 239 Query: 250 YTRAVKNADEVARVRNEWWKAELP--FVTDGVVVRAAKEPE--SRHWLPGQAEWLVAWKY 305 N++E+ +V ++ K+ F DG+V S +A+K+ Sbjct: 240 I--KYDNSEELEQVISKMQKSAYEKGFPIDGLVFAYNNIEYANSLGDTLHHPLHSIAYKF 297 Query: 306 QPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQI 365 + A ++ V ++G I+ VA PV ++ V+R + ++ +++ + GD I Sbjct: 298 YDEEYETKYIATEWQVSRTGMINPVARFEPVEIEGSVVERATLHNLDYFEDLKLGQGDTI 357 Query: 366 LVSLAGQGIPRIDDVVWRGAERTKPTPPENRF---------NSLTCYFASDVCQEQFISR 416 V A Q IP++ PT + + C + ISR Sbjct: 358 KVIKANQVIPKVMSNDTMSNTEIIPTECPVCGGKTEEKLLKTARVLICINPECSAKHISR 417 Query: 417 LVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQLW 474 +V ++ + +DG+ E + I L E++ N G + Sbjct: 418 IVHYCSRNAMNIDGLSEKTIEKFVNLGYLKDIDDIYKLEQYKEEIINIDGFGTKSYNNMI 477 Query: 475 HQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRA 531 ++ ++ A+G+P A L +S +++ + + G G Sbjct: 478 EAIEKSKHCKLENFIFALGVPSVGLGTAKLLVKKFKSIEKVMNCNLEEIYSIDGIGDVVG 537 Query: 532 RQVIEWK-ENAQIKKLGSWLAAQQITGFE 559 ++ + N L + L I E Sbjct: 538 NEIYNYFIINKDSINLVNKLLKF-IDFEE 565 >UniRef50_C2L1C3 DNA ligase (NAD(+)) n=8 Tax=Firmicutes RepID=C2L1C3_9FIRM Length = 692 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 94/570 (16%), Positives = 207/570 (36%), Gaps = 44/570 (7%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SE 78 + + L + + Y++EG+ V + YD+ L ++ G S Sbjct: 35 EADKQDSIARMKELISFLNEAAKAYYQEGREIVSNLEYDKAYDTLLSLEKESGVVLSGSP 94 Query: 79 PRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRD 136 ++V H + K L +++ + + K+DG+ + L Y++ Sbjct: 95 SQNVGYAVATALPKEAHETPMLSLDKTKSVEDLQSFLQGQEGIL-SWKLDGLTIVLHYQE 153 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG-- 194 GKL KA++RGNG+ GE T+ +P + + ++GE F+ + Sbjct: 154 GKLLKAVTRGNGIIGELVTENAKTFQNLPLQIPFK-GHLVVRGEAFISYSDFERINEELP 212 Query: 195 -----GINARAKVAGLMMRQDDSDT-LNSLGVFVWAW---------PDGPQLMSDRLKEL 239 N R +G + + D T + + +++ PD + + L Sbjct: 213 EEGAKYKNPRNLCSGSVRQLDPKVTKERRVQISLFSLVLAEEEGKAPDFHNQHEEEFRFL 272 Query: 240 ATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQA 297 GF++ +N E ++ + F +DG+V+ Sbjct: 273 EKQGFSVVHRKMVNAENIQEAVAEFSKLM-PKNDFPSDGLVLLYNDIAYGESLGRTAKFP 331 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 +A+K+Q + ++ +++++ ++G I+ VA PV L+ V R ++ ++ ++ Sbjct: 332 RNAIAFKWQDEEETTKLLSVEWSPSRTGLINPVAIFTPVELEGTVVSRASLHNITYCEDL 391 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLT---------CYFASDV 408 + GD+I V A IP+I + + P Y + Sbjct: 392 ALGIGDEITVYKANMIIPQIGENKTKSGNLEIPKHCPACQGETKIVKDKETKMLYCTNPH 451 Query: 409 CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTPGIA 466 C + I + ++ L ++G+ E + L E++ G Sbjct: 452 CPAKRIKQFALFVSRDALNIEGLSEMTLEKWLGRGFIQEFPDLFSLEKYREEIIGMEGFG 511 Query: 467 KSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWS----QLLFSTEQFWQQ 522 ++ A+ R + +GI + ++S +L+ +T++ Q Sbjct: 512 LKSFEKIQENIEKAKTSNLGRLLYGLGIEGIGVSNGRMLAEAFSQDPYKLMDATKEEILQ 571 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 + G G A + E+ + + +++ L + Sbjct: 572 VKGIGQVLADSIAEYFQKEENRRIVLELLS 601 >UniRef50_D2AQV6 DNA ligase (NAD(+)) n=2 Tax=Actinomycetales RepID=D2AQV6_STRRD Length = 696 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 114/568 (20%), Positives = 212/568 (37%), Gaps = 61/568 (10%) Query: 48 YWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLNGAVMHPVAHTGVR 101 Y+ +G S ++D YD+L + ++ S V + G V H V + Sbjct: 30 YYGDGTSTLDDDAYDRLVRGIQAYEAEHPDEVLPTSPTGKVAGGAVVGDVPHTVPMLSLD 89 Query: 102 KMVDKNALSLWM--------RERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGED 153 + L+ W R ++ V+PK+DG+A+ YR G+L + ++RG+G GED Sbjct: 90 NVFGAGQLADWAASLERRLGRPVTEWSVEPKLDGLAIAARYRGGRLVQLVTRGDGTAGED 149 Query: 154 WTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ--------QQMGGINARAKVAGL 205 + + I +P ++ P+ L+GE+ + N R+ AG Sbjct: 150 VSHAIGTIVGLPARLAEPVT-VELRGEVMMTASQFEDACVKRQAHDGTTFANPRSAAAGT 208 Query: 206 MMRQDDSDTLNSLGVFVWAWPDGPQL------------MSDRLKELATAGFT---LTQTY 250 + QD L F + P S+ + +A G +T Sbjct: 209 LRAQDRPYVCE-LTFFGYGALPYPDDTSEQAVQLRELPHSEVMTWVAGQGVQTPAVTDVG 267 Query: 251 TRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHWLPGQAEWLVAWKYQ 306 +++ + + ELPF DG+V++ + + W +A+K Sbjct: 268 GIVATTLEQIQERVEQIAAKRTELPFGIDGIVIKCDLAADQAQAGFSSRAPRWAIAYKLP 327 Query: 307 PVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQIL 366 ++ ++ +++ G+SG I+ A L PV LD V + +V + GD ++ Sbjct: 328 ATEKITKLLGVEWNTGRSGIIAPRAVLEPVELDGSIVTYATLHNVADITRRGLMLGDSVV 387 Query: 367 VSLAGQGIPRIDDVV--WRGAERTKPTPPENRFNS--------LTCYFA-SDVCQEQFIS 415 V AG IPR++ V R + P+ C + I+ Sbjct: 388 VYKAGDVIPRVEAPVVHLRTGDEQPIAIPQVCPTCGDAIDASQERWRCVRGRAC--RVIA 445 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWH 475 + + + L ++G+ E + L LT EQ+ + + + L Sbjct: 446 SIGYAAGRDQLDIEGLAENRIQQLLDAGLIVDFADLFYLTREQVLGLERMGATSTDNLLA 505 Query: 476 QFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQFWQQLPGTGSGRAR 532 A+ QP +R A+G+ T ++ A S + + + + + G G +A Sbjct: 506 AIERAKAQPLSRVFCALGVRGTGRSMSRRIARHFGSMDAIRAADAEAIEAVEGIGPKKAP 565 Query: 533 QVIEWKENAQIKKLGSWLAAQQITGFEP 560 V+ E ++ L L +T EP Sbjct: 566 GVVA--ELVELADLIDKLVKAGVTMTEP 591 >UniRef50_Q1C259 DNA ligase B n=34 Tax=Yersinia RepID=LIGB_YERPA Length = 567 Score = 515 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 246/564 (43%), Positives = 354/564 (62%), Gaps = 10/564 (1%) Query: 1 MKVWMAILIGILCWQSSVWAV--CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVED 58 +K+ M +LI WA CP W R EI+ L+QQ+ +W Y ++G S V D Sbjct: 6 LKIIMFLLISNTIVVGGAWATSTCPDWPATRIAVEINALEQQLNKWSAAYHQQGHSPVTD 65 Query: 59 GVYDQLSARLTQWQRCFGSEPRDVMMP-PLNGAVMHPVAHTGVRKMVDKNALSLWMRERS 117 +YDQL +L WQ C G + P P G +HPVAH+G++K+ D+ AL+ WM R Sbjct: 66 DIYDQLQDKLRVWQSCRGLPDKTESQPIPGKGQFLHPVAHSGLKKLKDETALTRWMAGRK 125 Query: 118 DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL 177 +LWVQPKVDGVAVTLVY GKL + +SRGNG+KG++WT+K ISA+PQ ++ A TL Sbjct: 126 NLWVQPKVDGVAVTLVYHGGKLVQLLSRGNGVKGQNWTEKAPFISAIPQYIANAPALLTL 185 Query: 178 QGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLK 237 QGE+FL +GH Q + GG+NAR+ VAG +MR+ S L +GVF+WAWPDGP M +++ Sbjct: 186 QGELFLLMDGHQQAKSGGVNARSTVAGALMRKSPSPLLAQVGVFIWAWPDGPTTMKEKVA 245 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQA 297 L GF T Y+ V + +V + R W++A LPFVTDGVVVR +EP R+W Sbjct: 246 LLQVMGFPFTAKYSEPVMSHLDVVQWRQFWFQAPLPFVTDGVVVRQEEEPAGRYWQATPG 305 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 +W +AWKY P+ +AEVK I F +G++GK +VV + P+ +DDK ++RVNIGSV RW++W Sbjct: 306 QWSMAWKYPPLQHIAEVKDIHFTLGRTGKGTVVLEVLPIKIDDKWIRRVNIGSVTRWKQW 365 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPEN-RFNSLTCY-FASDVCQEQFIS 415 DIAPGD I ++LAG GIPR+D+VVWR +R T P +F+ L+C+ C+ QF+S Sbjct: 366 DIAPGDHITLALAGHGIPRLDNVVWRVHQRNTITAPNWDKFHQLSCFQRLPHGCEPQFLS 425 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWH 475 RL+WL L + GIG W+ L + WLLLTPEQ+ + PGI +++ +++ Sbjct: 426 RLIWLSGPGGLDIGGIGGGFWQELIHHELINDLVGWLLLTPEQIASIPGIGNARAEKIYQ 485 Query: 476 QFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVI 535 QF A++QPF+RW++A+G P S + W +L + W + G G RA+Q+ Sbjct: 486 QFQRAKQQPFSRWLLALGFPQV-----VSVDAQWQVVLRRSLSEWATMAGIGQMRAKQIK 540 Query: 536 EWKENAQIKKLGSWLAAQQITGFE 559 + ++ ++ L +L+ Q++ GFE Sbjct: 541 HFLDHPDVQALADFLSTQKVVGFE 564 >UniRef50_Q1QXD7 DNA ligase B n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=LIGB_CHRSD Length = 629 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 203/558 (36%), Positives = 303/558 (54%), Gaps = 11/558 (1%) Query: 6 AILIGILCWQSSVWAV---CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYD 62 +L+G+ WA CP +P Q + L +I +WD Y+++G+ V+DG YD Sbjct: 27 CLLVGLSTLAMPGWASAPPCPQMTPEAMQNDYQALDARIARWDRAYYRQGQRLVDDGTYD 86 Query: 63 QLSARLTQWQRCFGSEP-RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--L 119 RL W CF V GA HPVA TG+ K+ D++A++ W+ + D L Sbjct: 87 SAKRRLAHWAECFPLLAKPSVNTHEPTGAKHHPVAQTGIAKLPDRDAVAGWVARQGDHPL 146 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTL-Q 178 WVQPKVDGVAVTLVYR G+L AISRG+G+ G+DW K I+A+P + + Q Sbjct: 147 WVQPKVDGVAVTLVYRHGRLAAAISRGDGVSGQDWYTKALHIAAIPSHLPADAPPLVILQ 206 Query: 179 GEIFLQREGHIQQQMGGINARAKVAGLMMRQ-DDSDTLNSLGVFVWAWPDGPQLMSDRLK 237 GE++ +R H Q + G ARA++AGLM R +++G+FVWAWP+GP M +RL+ Sbjct: 207 GELYARRTAHRQSRDGTDGARARIAGLMARDTLTDREGSTIGLFVWAWPNGPDTMPERLE 266 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQA 297 LA GF T V A+++A R W++ LPF TDGVVV+ P W Sbjct: 267 TLAGWGFGDVAEMTHGVATAEDIAAWRQRWYRHALPFATDGVVVKRGDRPPGSDWQASPP 326 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 +W +AWKY +A V A++F+VG++G+I+VVA L PV+L DK+V RV++GS+ W+ Sbjct: 327 DWAMAWKYPAREALARVDALEFSVGRTGRIAVVAELEPVLLGDKRVTRVSLGSLAHWRRT 386 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPE-NRFNSLTCYFASDVCQEQFISR 416 D+ PGDQ+ + LAG IP++ +VV R R + PE ++++ L+C + C++QF++R Sbjct: 387 DVRPGDQVRLRLAGLTIPQLQEVVVRTRPRPQVDAPEADQYDRLSCLRFTPACRDQFLAR 446 Query: 417 LVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQ 476 L WLG+ + L GIG A W L + + W L L+ PG+ K + Sbjct: 447 LEWLGSDEGLDFPGIGPATWNQLVDAGLVKGLLDWRTLDTAALEALPGVGKKTARAWQRH 506 Query: 477 FNLARKQPFTRWVMAMGIPLTRAALN--ASDERSWSQLLFSTEQFWQQLPGTGSGRARQV 534 F LA + RW+ A+G+P A + + L W+ G G RA Q+ Sbjct: 507 FALADTRSAVRWLRALGVPAVPRQALTDALERYGMAGLGTLAPPDWRDYSGIGETRAMQL 566 Query: 535 IEWKENAQIKKLGSWLAA 552 + + I+ + L + Sbjct: 567 TRFFRDTDIRHWLASLES 584 >UniRef50_Q4A899 DNA ligase n=6 Tax=Mycoplasma RepID=DNLJ_MYCH7 Length = 692 Score = 513 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 102/605 (16%), Positives = 219/605 (36%), Gaps = 76/605 (12%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG---------- 76 ++ + +I L+++I++W+ Y++ V+D VYD+ L + +R Sbjct: 4 NSQIRAKIIELREKIEKWNHHYYQLQNPLVDDLVYDKTLRELEKLERENFFLFSLEELNQ 63 Query: 77 SEPRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRERSD------LWVQPKVDGV 128 S + V V H + K L W ++ + +V+PK+DG+ Sbjct: 64 SPSQKVGSKITSKFEKVAHSSPMLSLNKAYSNEELEKWAKKAREILKTVTFFVEPKIDGI 123 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISA--VPQTVSGPLANSTLQGEIFLQRE 186 A++L Y++G L KA++RG+G+ GE+ I+ +P+ ++ L + ++GEI++ Sbjct: 124 ALSLFYQNGNLIKALTRGDGVFGENVLVNALKINDEFIPKKINY-LEDLEVRGEIYIDNS 182 Query: 187 GHIQQQ---MGGINARAKVAGLMMR---QDDSDTLNSLGV------------FVWAWPDG 228 Q N R +G++ R S+ F + + Sbjct: 183 TFASLQLETKKFKNPRNAASGILRRYKNHKPKIDAKSIKFLEEESDFRYLKSFFYTLVNP 242 Query: 229 PQ----LMSDRLKELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVR 282 + D + L GF + + + + +V + + + L + DGVVV+ Sbjct: 243 EKHKINSQFDSINFLRNLGFQVNP-FQKKCSDLKDVFNFISIIKQKRDFLNYNIDGVVVK 301 Query: 283 AAKEP--ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDD 340 + E +A+K++ ++ AI +G++GK++ A + PV L Sbjct: 302 VNEFSIYEKLGSTSKFPHSAIAFKFEDDIAKTKLLAIFATIGRTGKVTYNAKIEPVTLAG 361 Query: 341 KKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPT---PPENRF 397 K+ + + + + ++ + AG+ IP+I V + P+ Sbjct: 362 SKISSAILPNYSYIENLKLNLNTEVYIKKAGEIIPQIIGSVHNYPKTNFSIVKNCPKCNS 421 Query: 398 N------SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSW 451 L + + C E + ++V +K L ++ + + + Sbjct: 422 ELVNSESGLDQFCQNQFCPEIILQKIVHFCSKNALNIESLAQKRIEKFLEKGLISSACDI 481 Query: 452 LLLT------------PEQLQNTPGIAK----SKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L QL ++ +L ++ A+ F R + +GI Sbjct: 482 FYLKDKLELIYERLSNKNQLLTKQNASQSMQIKSIMKLLNEVERAKNIDFYRLIFGLGIR 541 Query: 496 LTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAA 552 A + + + S+L + G +I++ N + + + L Sbjct: 542 NVGLKAAKILSRYASNLSELRNLDFNLLKNQHDFGPVIIESLIDYFNNQKNSEQLNCLET 601 Query: 553 QQITG 557 Sbjct: 602 VGFNF 606 >UniRef50_Q4A5J6 DNA ligase n=1 Tax=Mycoplasma synoviae 53 RepID=DNLJ_MYCS5 Length = 697 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 110/610 (18%), Positives = 218/610 (35%), Gaps = 84/610 (13%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSE------ 78 S + +E+I L +K + Y+ EV+D YD L L + + + S Sbjct: 1 MSNQQIKEKIISLNNYLKHLNHLYYDLDAPEVDDKTYDSLYNELLELEAKYPSLVLEDSV 60 Query: 79 PRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDGV 128 + + H + K ++ + + ++PK+DG+ Sbjct: 61 TKIIGAFVSNKFKKTKHNKEMLSLDKAYKESEIFSFYENFTQYKNLENFGFSLEPKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 ++++ Y +GK KAI+RG+G GED ++ V I VP+ +S L ++GEI++++ Sbjct: 121 SISIHYDNGKFIKAITRGDGTTGEDVSENVFQIRDVPKQISY-LKPLEVRGEIYMKKSTW 179 Query: 189 IQQQMG------------------------------------GINARAKVAGLMMRQDDS 212 NAR AG + ++D Sbjct: 180 KSLNEDIKNQYFQTNIEKIFSYMQALPKSKSWSNLKIKTPIFFKNARNAAAGTLRQKDPK 239 Query: 213 DTL-NSLGVFVWAWP----DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW 267 +L + + + L L F + + + + KN E+ NE+ Sbjct: 240 IVKSRNLSSLFYEIVSPLEHNLKTQMEVLAFLKEQNFEVNE-FQKLAKNDQEIMFEINEF 298 Query: 268 --WKAELPFVTDGVVVRAA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGK 323 K F DG V++ + E + +W +A+KY ++ I VG+ Sbjct: 299 SKIKNNFEFDCDGFVIKFNLIDKWEQIGFTSKFPKWAIAYKYMLEEANTKILNIVAQVGR 358 Query: 324 SGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR 383 +G I+ +A PV L++ VQ + + ++ +I GD+I + +G+ IP++ + + Sbjct: 359 TGNITYIAQFMPVELNNTTVQNATLHNYEFIKKNNINIGDEITIIKSGEIIPKVISIYKK 418 Query: 384 GAERTKPT---PPEN------RFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEA 434 + P + + ++ C E+ I L + +K L + + Sbjct: 419 NTDSVFEKVLNCPSCNSLLEIPEGYVDQFCRNENCDEKKIQMLTFFVSKNCLNITNLSVQ 478 Query: 435 GWRALHQTHRF--EHIFSWLLLT--PEQLQNTPGIA-----KSKSAQLWHQFNLARKQPF 485 R + I LL ++++ A K + A+ Sbjct: 479 NIRIFYNHPVIQMREIQDIFLLKNHVDEIKKIKFFAGKSQENKKINNILQSIEKAKDAYL 538 Query: 486 TRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 + A+GI A L + S L T++ + G + E+ + + Sbjct: 539 RNVLAALGIKGIGNIAANLLTNKITKLSDLNNLTDEDLLSIDTFGEKSIENLKEFLSSEK 598 Query: 543 IKKLGSWLAA 552 + L +L Sbjct: 599 NQDLIKFLDE 608 >UniRef50_C2BRA8 DNA ligase (NAD(+)) n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BRA8_9ACTO Length = 799 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 114/689 (16%), Positives = 209/689 (30%), Gaps = 160/689 (23%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKE----GKSEVEDGVYDQLSARLTQWQRCFG------ 76 P A + + L QI+ DY+ + G + + D YD L +L + + Sbjct: 9 PESALAQHADLVDQIEAARTDYYDQTPETGVTRLSDAEYDALFVQLQLLEAAYPDLVTPD 68 Query: 77 SEPRDVMMPPLNGAVM------HPVAHTGVRKMVDKNALSLWMRERSD--------LWVQ 122 S + V H + + + W + + Sbjct: 69 SPTQTVGGSGETANTEGFPPHHHLCQMGSIDDVFSYAEVDAWWARVEKSLEGQDFSVSAE 128 Query: 123 PKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTLQGE 180 KVDG+A++L Y G L +RG+G GED T+ V I+ VP +SG ++GE Sbjct: 129 VKVDGLAMSLTYLHGTLAVGATRGDGFTGEDVTENVKTIATVPVRLSGENVPELVEIRGE 188 Query: 181 IFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWPD---- 227 ++L N R G + ++D L Sbjct: 189 VYLPLADFAAMNAARERDGEKLFANPRNAATGSLKQKDPVQAAKRPLAFLAHGVGKVRWA 248 Query: 228 ------GPQLMSDRLKELATAGFTLTQTYTRA-------VKNADEVARVRNEW--WKAEL 272 + D + L + G + + + + E+ V ++ + + Sbjct: 249 DPGAAAHLETQEDFYELLESWGLHSVRETPASLGLSLAGIHSLAEIHTVLDQMTAHRHDF 308 Query: 273 PFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVV 330 DGVV++ + W A+K+ P + I+ VG++G+++ Sbjct: 309 AHQIDGVVLKVDSFAQRDALGSTARAPRWACAYKFPPEEVHTRLLGIEVQVGRTGRVTPF 368 Query: 331 ASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV--WRGAERT 388 + V++D V R + + + D+ PGD +++ AG IP I V R A Sbjct: 369 GVMERVLVDGSYVSRATLHNAKEVARKDVRPGDTVVLRKAGDIIPEILGPVMSLRTAGLP 428 Query: 389 KPTPPENRFNS-----------LTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 + P+ + + + C Q RL+ +G++ L ++G+GE G Sbjct: 429 EWVMPDTCPSCGTELGAQKEGDIDLRCPNQSGCPAQITERLIHVGSRNALDIEGLGEEGA 488 Query: 437 RALHQTHR-----------------------------------------------FEHIF 449 AL Q Sbjct: 489 LALTQPEFGRGDVAAALAAGGHCELEDGTIVAVPSGEPRSLEAIEDLLPPPQSPVLTSEA 548 Query: 450 SWLLLTPEQL------QNTPGIA----------------------------------KSK 469 L PE L + PG Sbjct: 549 GLFALQPEDLRDVMVWREIPGTGGRDWQQVRFFWAKPRPLPKAAQEATGQRFGPPVAGKV 608 Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGT 526 + Q A+ + R ++A+ I A A + S L ++ + + G Sbjct: 609 VQTFFEQLQAAKSKELWRVLVALSIRHLGPVAARTIARQFVTMSALRVASAEQLGEAEGI 668 Query: 527 GSGRARQVIEWKENAQIKKLGSWLAAQQI 555 G A + +W +++ A + Sbjct: 669 GEVIAASIRDWFTVPWHQEIVDAWEAAGV 697 >UniRef50_C6WRP3 DNA ligase, NAD-dependent n=3 Tax=Actinobacteria (class) RepID=C6WRP3_ACTMD Length = 674 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 117/570 (20%), Positives = 209/570 (36%), Gaps = 43/570 (7%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD---- 81 A+E I L ++ D Y++ G V D YD L D Sbjct: 7 PTVNAEERIRDLADRVVSLRDAYYR-GSPLVADAEYDATEDELRSLIAANPELTPDPNPL 65 Query: 82 --VMMP-PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD--LWVQPKVDGVAVTLVYRD 136 V P L+ V H + K ++ ++ + V PK+DG++++LVY Sbjct: 66 DQVGAPAVLHAPVRHARPMLSLEKATQPEQVAAFLDRFPGQPVVVMPKLDGLSLSLVYEG 125 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISA-VPQTVSGPLANSTLQGEIFLQREGHIQQQM-- 193 G L +A++RG+G G+D T V ++ VP V ++GE + R Sbjct: 126 GALLRAVTRGDGTTGDDVTPLVRALADGVPTRVP-APGRVEVRGEAVMLRSTFTAYNEAH 184 Query: 194 ---GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP----DGPQLMSDRLKELATAGFT 245 IN R AG + +D + L + G + +D + L GFT Sbjct: 185 PDKPLINPRNAAAGTLRAKDPATVAGRRLRFLAFELDTDAEAGAGVGADLEEGLRALGFT 244 Query: 246 LTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAW 303 A A + E +A+L + DG V+R A +A+ Sbjct: 245 PADMRHAADAEAAQRVITGIETGRADLDYDLDGAVLRLADRRAYAAAGTRSNSPRGALAF 304 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGD 363 K+ + + + + VGK+GK+ VA L PV + V R + + + + GD Sbjct: 305 KFAAEEKTTLLVDVVWDVGKTGKVVPVAHLEPVFVGGTTVTRATLANQEVIKARGVMVGD 364 Query: 364 QILVSLAGQGIPRIDDVV---WRGAERTKPTPPENRFNS----------LTCYFASDVCQ 410 +LV AG IP + V+ R E + PP + + + C Sbjct: 365 TVLVRRAGDVIPFVAGVLDAAKRTGEEREIVPPSTCPSCDQPLTEQGNSRELFCTNVSCA 424 Query: 411 EQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKS 470 Q + RL+ ++ +D IG + EH + LLT EQL + ++ + Sbjct: 425 AQTVRRLIHWASRAAADIDAIGPVWIERFAEAGLLEHPSDFYLLTKEQLLEFERVGETSA 484 Query: 471 AQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASD----ERSWSQLLFSTEQFWQQLPGT 526 ++ +R R ++ +P+ S ++ + E+ ++ Sbjct: 485 TRMIESIAASRAVGLRRALIGFAVPMASEGTATRLCRAGFGSLEEVADAGEERLVEVEDI 544 Query: 527 GSGRARQVIEWKENAQIKKLGSWLAAQQIT 556 G A + E +++ + L + ++ Sbjct: 545 GPKVAASLTEHLA--RLRPELTRLRQRGVS 572 >UniRef50_B1VUC2 DNA ligase 1 n=13 Tax=Streptomyces RepID=DNLJ1_STRGG Length = 719 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 122/563 (21%), Positives = 219/563 (38%), Gaps = 60/563 (10%) Query: 52 GKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLNGAVMHPVAHTGVRKMVD 105 G+S ++D YD+L+ + ++ S V G V H V + + Sbjct: 42 GESALDDDAYDRLARGIAAYEADHPEEVLADSPTGKVAGGAAVGDVPHTVPMLSLDNVFS 101 Query: 106 KNALSLWM--------RERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQK 157 W R + V+PK+DG+AV YRDG+ + I+RG+G GED + Sbjct: 102 AEQFVTWTASLERRIGRPVTAWSVEPKLDGLAVAARYRDGRFERLITRGDGTAGEDVSHA 161 Query: 158 VSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM--------GGINARAKVAGLMMRQ 209 + +P+ ++ P+ ++GEI + E Q N R AG + + Sbjct: 162 AGAVVGLPERLAEPVT-IEVRGEILMTNEQFAQGNAIRTEHGGAPFANPRNGAAGTLRAK 220 Query: 210 DDSDTLNSLGVFVWAWPDGPQL-----------MSDRLKELATAGFTL---TQTYTRAVK 255 D + + + F + P S+ L +A G T Sbjct: 221 DRAYRVET-TFFAYGALPLPDSGELGEALAELPHSEVLAYVAGLGVHTAAGTAVAPLRAT 279 Query: 256 NADEVARVRNEW--WKAELPFVTDGVVVRAA--KEPESRHWLPGQAEWLVAWKYQPVAQV 311 +EV + +A LPF DG+V++A + + W VA+K V ++ Sbjct: 280 TVEEVQARVDGIGALRAALPFGIDGIVIKADLAADQQEAGSGTRAPRWAVAYKLPAVEKI 339 Query: 312 AEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAG 371 + A+++ VG++G I+ A L PV +D V + + D+ GDQ++V AG Sbjct: 340 TRLLAVEWNVGRTGIIAPRAVLEPVEIDGSTVGYATLHNPADITRRDLRLGDQVMVYKAG 399 Query: 372 QGIPRIDDVV--WRGAERTKPTPPENRFNSLT---------CYFASDVCQEQFISRLVWL 420 IPRI+ V R + T PE+ + C + ++ + + Sbjct: 400 DIIPRIEAPVVHLRTGDETPIAFPESCPQCGSEIDASEQRWRCTRGRDC--RLVASVSYA 457 Query: 421 GAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA 480 + L ++G+G L L EQL + ++ + L A Sbjct: 458 AGRDQLDIEGLGSTRVVQLVDAGLVADFADLFTLRREQLLALDRMGETSTDNLLAAIETA 517 Query: 481 RKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEW 537 R +P +R A+G+ T ++ A + +++ + + Q++ G G +A V+ Sbjct: 518 RTRPLSRVFCALGVRGTGRSMSRRIARHFATMDRIVAADAESLQRVDGIGKEKAAAVVA- 576 Query: 538 KENAQIKKLGSWLAAQQITGFEP 560 E ++ L L A ++ EP Sbjct: 577 -ELVELAPLIGKLVAAGVSMTEP 598 >UniRef50_B8I3I1 DNA ligase n=24 Tax=Bacteria RepID=DNLJ_CLOCE Length = 657 Score = 503 bits (1295), Expect = e-141, Method: Composition-based stats. Identities = 104/574 (18%), Positives = 220/574 (38%), Gaps = 47/574 (8%) Query: 30 AQEEISRLQQQIK---QWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRD 81 ++I ++ +I+ + Y++E + + YD+L L + ++ G S Sbjct: 1 MADKIQLMKDKIEILDRAAKAYYQENTEIMSNIEYDKLYDELLELEKETGVVLSNSPSIH 60 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKL 139 V L+ H + K D L W+ + + K+DG+ + L Y+DG L Sbjct: 61 VGYELLSNLPKERHEKPMLSLDKTKDVGTLKEWLGTQKGIL-SWKLDGLTIVLTYQDGHL 119 Query: 140 NKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG----- 194 KA++RG G +GE T + +P T++ L+GE ++ I+ Sbjct: 120 VKAVTRGTGEEGEVITNNARVFRNLPVTIAYK-GTLILRGEAIIRYSDFIKINNEIADVG 178 Query: 195 --GINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLMSD-----RLKELATAGFTL 246 N R +G + + ++ T + F ++ + D ++ L GF + Sbjct: 179 VKYKNPRNLCSGSVRQLNNKVTSERNVYFFGFSLVKADNVELDNSRASQMNWLKNQGFDI 238 Query: 247 TQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWK 304 N +E + ++ +A F +DG+V+ +A+K Sbjct: 239 VDFKEVTSSNIEETVQWFSQNIEAN-DFPSDGLVLTFEDIAYGESLGSTAKFPRDSIAFK 297 Query: 305 YQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQ 364 ++ + + I+++ ++G I+ +A PV L+ V R +I ++ + ++ GD Sbjct: 298 WRDEIKETTLLNIEWSPSRTGLINPIAIFEPVELEGTTVSRASIHNISIMEGLELGIGDT 357 Query: 365 ILVSLAGQGIPRIDDVVWRGAERTKP-TPPENRFNSLT--------CYFASDVCQEQFIS 415 I V A IP+I + + R P P + + Y ++ C + I Sbjct: 358 IGVYKANMIIPQISENLTRSGMAPIPEECPVCKGKTEIKQENGVKTLYCVNNECLAKQIK 417 Query: 416 RLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQL 473 + + ++G+ EA L + + + ++ G+ + +L Sbjct: 418 SFTHFVGRDAMNMEGLSEATLEKLIAKGLIKELADLFHIEKYKNEILELEGLGEKSFNKL 477 Query: 474 WHQFNLARKQPFTRWVMAMGIPLTR---AALNASDER-SWSQLLFSTEQFWQQLPGTGSG 529 N ARK R + ++GIP A L + W+++ + Q+ G G Sbjct: 478 ITSINKARKTTAVRLLYSLGIPNVGLSNAKLICRYFKYDWNKIENAEFSELIQIGGIGDI 537 Query: 530 RARQVIEWKENAQ----IKKLGSWLAAQQITGFE 559 A I + + + ++ + + L +++ + Sbjct: 538 MAESFIRFFSDEKKKVIVQDVLNELELEEVQLSQ 571 >UniRef50_Q2Q0G8 NAD-dependent DNA ligase n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G8_9ZZZZ Length = 707 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 109/596 (18%), Positives = 220/596 (36%), Gaps = 81/596 (13%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNG--A 90 E RL +I++ + Y+ + E+ D +D L RL + V P G Sbjct: 10 EADRLASEIQRHSELYYNYAEPEITDAQFDLLIQRLREIDPSNPQL-EKVGADPAPGSVK 68 Query: 91 VMHPVAHTGVRKMVDKNALSLWMR----ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRG 146 V H + K ++ ++ VQPK+DG A++L YR G L +A++RG Sbjct: 69 VEHIYPMLSLDKANTPQEIAHFVNITSAATQRFVVQPKLDGSAISLEYRRGMLVRAVTRG 128 Query: 147 NGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI-NARAKVAGL 205 +G +GED T+ V I +P + N ++GE+ + + + + N R AG Sbjct: 129 SGTRGEDVTRNVRRIPNIPNRIKWR-GNCFVRGEVVMLLDTYRENYAEVAPNPRNLAAGA 187 Query: 206 MMRQDD---SDTLNSLGVFVWAW--PDGPQ-----------LMSDRLKELATAGFTLTQT 249 + +++ L F + P+G S L+ L T Sbjct: 188 LRQKNPESGKARAEDLRFFAYDVKFPEGASGEESKAPLNYIHDSQILEWLFTMDIQPAGR 247 Query: 250 YTRAVKNADEVARVR----NEWW--KAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLV 301 + ++DEV + E + E+P+ DG+V++ + + W + Sbjct: 248 FVVEADDSDEVIELLISKTEEAIGSREEMPWEIDGLVIKVDELTKRPLLGETAHHPRWAL 307 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 AWK+ P V ++ + G++G ++ VA +APVM+ V+ + + + + Sbjct: 308 AWKFPPEEATTVVMSVDWQTGRTGNVTPVARVAPVMVSGVTVENTTLHNPGEVERLGLKI 367 Query: 362 GDQILVSLAGQGIPRIDDVV--------------------WRGAERTKPTPPENRFNS-- 399 GD++++ G IP+I V+ ER PP Sbjct: 368 GDRVMIVRRGDVIPKITKVIGQATGTDLEGRRHSDGTPFHEALPERIDVEPPSVCPRCGT 427 Query: 400 ------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL 453 + C + + +++ + L +DG+GE L ++ + Sbjct: 428 NLHSEGAFLKCRNSGCPSRVVRSILYWC--KSLEIDGVGEKLANQLVESGLAPELADLYR 485 Query: 454 LTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWS 510 L+ + + + + + ++ Q RK ++ ++G+P A++ + + ++ Sbjct: 486 LSHADVLSLERMGEKSARRVIDQIQSKRKMSLDHFIASLGLPRIGPEIASMISKEIKTIE 545 Query: 511 QLLFS------TEQF-------WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 + + G G AR ++ + L++ Sbjct: 546 NFRNLVNTWSSGREETTDILPRLVAIDGIGEIVARLFLD--GSKSNWSQIEDLSSL 599 >UniRef50_Q7N9N4 DNA ligase B n=3 Tax=Enterobacteriaceae RepID=LIGB_PHOLL Length = 580 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 213/561 (37%), Positives = 332/561 (59%), Gaps = 10/561 (1%) Query: 3 VWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYD 62 V+ + ++ + S+ CP WS + Q E + L QQ+ WD Y ++G SE++D VYD Sbjct: 12 VFSSPIVAAEIFVSNTEKNCPEWSQDKLQRETNSLMQQMAHWDQLYRQKGISEIDDEVYD 71 Query: 63 QLSARLTQWQRCFGSEPRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW 120 QL + LT WQ C P + + ++HPVAHTG+ K+ DK ++ W+ R +W Sbjct: 72 QLMSELTHWQFCLKQAPHSDFPVEVFPDNKLVHPVAHTGLSKLKDKQEINRWLHGRLPVW 131 Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGE 180 +QPK+DGVAVTLVY++GKL ISRGNG +G +WT K I +PQ + + LQGE Sbjct: 132 LQPKIDGVAVTLVYQNGKLVSLISRGNGAEGVNWTAKSRYIPDIPQNIENAPPDLVLQGE 191 Query: 181 IFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELA 240 +FL +E H QQ +G AR +VAGLMMR+D S L +G+F+W+WPDGP M +L++LA Sbjct: 192 LFLHKEEHRQQLLGSDGARNRVAGLMMRKDHSSELKQIGLFIWSWPDGPAEMESKLRKLA 251 Query: 241 TAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWL 300 GF L Y+ ++ ++V ++R +++ + F TDG+V++ EP+ W G W Sbjct: 252 DMGFPLALRYSHKIEEPEQVQKLRMHYFEQPMLFATDGIVLKQEIEPKGNQWRSGSNSWA 311 Query: 301 VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA 360 VAWK+ QV +V+ + F +G++GKISVV L V LDD+++ RVNIGSVRRW++ D+ Sbjct: 312 VAWKHPLRHQVTQVREVNFTIGRTGKISVVLGLDKVKLDDRQISRVNIGSVRRWRQLDVL 371 Query: 361 PGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENR-FNSLTCYFASDVCQEQFISRLVW 419 PGD++ ++LAG GIP++ VVWR ER PP+ + +++L+C + C++QF +RL W Sbjct: 372 PGDRVTLTLAGHGIPKLAQVVWRIKERQDIQPPDKQHYHALSCLTLTVGCEQQFNARLKW 431 Query: 420 LGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNL 479 LG + L + G+ W L + + WL L+ +Q+ PGI ++ ++ QF+ Sbjct: 432 LG--ENLQMTGVSSGSWAMLTERKLVTDLTGWLALSAQQIAALPGIGDKRAQAIYSQFSK 489 Query: 480 ARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLF-STEQFWQQLPGTGSGRARQVIEWK 538 A+ QPF+ W+ +G+P + + W QL +Q G +++ ++ Sbjct: 490 AKNQPFSYWMKGIGVPYMDK--LSDNVYHWQQLEQKLAAAQLKQQLTVGQL--KKLSDFV 545 Query: 539 ENAQIKKLGSWLAAQQITGFE 559 +AQIK + L+ ITGF+ Sbjct: 546 SDAQIKAIAEKLSVAGITGFD 566 >UniRef50_A5IY71 DNA ligase n=1 Tax=Mycoplasma agalactiae PG2 RepID=DNLJ_MYCAP Length = 654 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 104/569 (18%), Positives = 232/569 (40%), Gaps = 43/569 (7%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 A+E I L ++I QW+ +Y++ K V D YD+ L + ++ S Sbjct: 1 MQKEEAKELIKSLVEKINQWNYEYYQLNKPSVSDLEYDKALLELEKLEKEHPDLILSNSP 60 Query: 79 PRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW--------VQPKVDGV 128 + ++ + K + + ++ ++ S + ++PK+DG+ Sbjct: 61 TFRIGSFASEKFTKFVYQKPMLSLAKAYNYDDINSFINNISKIVPTENINFNIEPKIDGL 120 Query: 129 AVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGH 188 ++ L Y+ GKL KA +RG+G +GED T+ + I ++P+ ++ + ++GE+F+ + Sbjct: 121 SIALRYKQGKLVKAATRGDGSEGEDVTENIYQIKSIPKLINY-FNDLEVRGEVFITKNDF 179 Query: 189 IQQQM--GGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQL----MSDRLKELAT 241 + NAR +G + + D + L F++ + + + L+ + Sbjct: 180 KKINESNNFANARNAASGTLRQLDANIVAERNLSAFLYEIVEPEKHGIYYQHEALEFMKN 239 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEW 299 F E + K +L + DG+V++ + + Sbjct: 240 LDFPTNPFSKVVEIEELEESISDFAEIKNKLDYDADGLVIKLNDLQMWDKLGKTSKFPKH 299 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +A+KY + + I +VG++GKI+ +A++ PV+L+ V+ + + ++ +I Sbjct: 300 SIAFKYDVEVASSRITDILTSVGRTGKITYIANILPVLLNQTTVKAATLHNHNFIKDMNI 359 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS----------LTCYFASDVC 409 D++ + AG+ IP++ + N + + + +D C Sbjct: 360 NINDEVNIIKAGEIIPKVISLKEEKNYVDYYKKATNCPSCGSQLVEFEGIVDQFCTNDEC 419 Query: 410 QEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTPGIAK 467 ++ I+ + ++ L + G+G + + + ++I L +L P Sbjct: 420 PDKNINNIYHFASRNCLNIVGLGLSTVKDFY-PKFIKNIKDIFDLHKYRAELIKLPRYRD 478 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLL-FSTEQFWQQL 523 K + + A+ + F++ + A+GI A L A + ++++LL Q Sbjct: 479 LKVDNILNSIESAKNKKFSKVIFALGIKHIGQRAAKLIADNYANFAELLDDHNLLKLQNT 538 Query: 524 PGTGSGRARQVIEWKENAQIKKLGSWLAA 552 G +IE+ + + L ++L A Sbjct: 539 KNIGPKIIESLIEFISSPANQDLLAFLDA 567 >UniRef50_UPI00016C60E9 DNA ligase, NAD-dependent n=1 Tax=Clostridium difficile QCD-76w55 RepID=UPI00016C60E9 Length = 663 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 107/581 (18%), Positives = 231/581 (39%), Gaps = 52/581 (8%) Query: 28 ARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRD 81 + +E+I L++++ + D Y +G + D YD+L +L + + S + Sbjct: 2 NKVEEKIRDLREEVIKHDLAY-AKGDPIISDTEYDKLYLKLVGLEELYPEYSDENSPTKR 60 Query: 82 VMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMR-ERSDLWVQPKVDGVAVTLVYRDGK 138 ++ + G V H + +K+ + L ++R +L V+ K+DG+ V Y +G Sbjct: 61 IIDIKVEGLKKVEHTIPMLSQKKINTPDELDKFIRQMNDELLVEDKLDGLTVIAKYNNGV 120 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI------QQQ 192 L + I+RG+G G+D T V +P+T+ ++ E + E +++ Sbjct: 121 LYEGITRGDGKIGDDITHIVLNTPNIPKTIPFN-DYLEIRLEGIIPNEDFEMVNSILEEE 179 Query: 193 MGGINARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDG----PQLMSDRLKELATAGFTLT 247 ++R +G + + L + + + +RL+ L T GF + Sbjct: 180 DKYKSSRNLASGTVRSLNGCVAKERGLKLIAFELVKADNIIFEKDYERLEFLKTLGFDVV 239 Query: 248 QTYTRAVKNADEVARV------RNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQAEW 299 YT KN +++ ++ N+ + L + DG+V++A +W Sbjct: 240 -NYTLFKKNEEDILKLKDYIFSYNQEVRPFLSYKVDGLVIKANSLELRDSLGNTSKYPKW 298 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 A+K++ + ++K VGKSG+++ VA PV +D + + + + + ++ DI Sbjct: 299 SSAFKFENEEAITKLKDCIIEVGKSGQLTPVALFEPVQIDGITISKATLSNFKNVKDKDI 358 Query: 360 APGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS--------LTCYFASDVC 409 GD ++V+ A IP+I+ + R E + P+ + + +D C Sbjct: 359 KIGDMVVVARANDVIPKIEHSIKEDRTGEEKEIEIPKFCPVCNEPIVKENVHYFCVNDDC 418 Query: 410 QEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLL--LTPEQLQNTPGIAK 467 Q +++ +K+ L +DG+GE + I + L A Sbjct: 419 PAQIEGKIIHFVSKKSLDIDGLGEESIKLFLDNGLISSIIDIFYLKDKKDDLLKLDKYAD 478 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAAL---NASDERSWSQLLFSTEQF----- 519 K + L +++ ++ + + I L A+ S +L ++ Sbjct: 479 KKVSNLLENIEASKQASLSKILHGLSIKLIGGRASKELANKFISMKNILNISKNEEEFKQ 538 Query: 520 -WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + G + ++ + ++ + +L + L E Sbjct: 539 SILSINNFGEEMSNNLVLFFKDERNIELINKLMEVGFKMEE 579 >UniRef50_B3T074 Putative NAD-dependent DNA ligase adenylation domain protein n=1 Tax=uncultured marine microorganism HF4000_001N02 RepID=B3T074_9ZZZZ Length = 727 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 111/608 (18%), Positives = 213/608 (35%), Gaps = 84/608 (13%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNG-- 89 I L Q + D Y+ E + D YD L L + V P G Sbjct: 13 ARIEELAQLLAHHSDLYYNEAAPVITDAEYDLLFDELKRLDPTHPQLD-RVGSDPAPGSV 71 Query: 90 AVMHPVAHTGVRKMVDKNALSLWMRERS----DLWVQPKVDGVAVTLVYRDGKLNKAISR 145 V H + K + +S ++ + + QPK+DG A++L YR G+L +A +R Sbjct: 72 KVEHLFPMQSLDKASEVAEISHFVAQTTAHGRRFVCQPKLDGSALSLEYRRGRLVRAATR 131 Query: 146 GNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGI-NARAKVAG 204 GNG +GED T I +P+++ G + ++GE+ + E + N R AG Sbjct: 132 GNGERGEDVTANARRIPNIPESL-GWDGDCHIRGEVVMPLETFRSKYASFAPNPRNLAAG 190 Query: 205 LMMRQ---DDSDTLNSLGVFVWAW--------------PDGPQLMSDRLKELATAGFTLT 247 + ++ L + P S + L G Sbjct: 191 SLRQKHVKAGKGDAADLSFHAYGVMFPGLDHKHPDSPAPPDFNHDSQAIDWLTQNGIAAA 250 Query: 248 QTYTRAVKNADEV-------------ARVRNEW--WKAELPFVTDGVVVRAAKEPES--R 290 + + +V W + + DGVV++ + + Sbjct: 251 GNEVVEAGVDEGIEEAEADEAVAEALLQVTENWARKRDTADWELDGVVIKLDEFRKRELL 310 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 W +AWK+ P + + + G++G ++ VA +APV + V+ + + Sbjct: 311 GKTAHHPRWALAWKFPPEEATTVLLGVDWQTGRTGTVTPVARVAPVRVSGVTVENTTLHN 370 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGA----------ERTKPTPP------- 393 + I+ GD++ ++ G IP+I +V+ + T P Sbjct: 371 AGEIERLGISVGDRVRITRRGDVIPKIVEVLGEATSADLDNRFHADGTPFADPLPLRRGV 430 Query: 394 ENRFNSLTC-----------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 + N C + C + +++ + L +DGIGE L + Sbjct: 431 KIPANCPRCRSGLQEDGAFIRCFNLECPSRLERSILYWC--RALEMDGIGEKLAEQLCEA 488 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---A 499 + + L+ + L+ +A+ +A + Q + ++ ++ A+G+P A Sbjct: 489 GLVKTLPDLYRLSGKDLEGLERMAEKSAANVIAQLDDSKTLDLAAFLAALGLPGIGPELA 548 Query: 500 ALNASDERS----WSQLLF--STEQFWQQLPGTGSGRARQVIEWKENAQ--IKKLGSWLA 551 A + S + L + + ++ G G A + E + ++ L L Sbjct: 549 GGFAQEIGSSTAMFELLADSEAAVERLIRIEGVGETVAGSFLSGLEMRREMVEDLVDVLT 608 Query: 552 AQQITGFE 559 + E Sbjct: 609 ITDVEAVE 616 >UniRef50_A6NWP3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NWP3_9BACE Length = 656 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 112/551 (20%), Positives = 205/551 (37%), Gaps = 38/551 (6%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMMPP 86 E + L Q IK+ D+ Y+K + D YD+L L +R G S + V Sbjct: 5 ERMRELIQTIKEADEAYYKYDAPIMADLDYDRLYDELAALERETGTILSSSPTQRVSGEV 64 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 L AV H K + ++ + + K+DG+ + L Y +GKL +AI+ Sbjct: 65 LESLTAVRHSRPMLSADKCKSVADIHKYLGGH-EAVLSWKLDGLTLVLRYENGKLVQAIT 123 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ----MGGINARA 200 RG+GL+GED T V ++ VP + ++GE + + + R Sbjct: 124 RGDGLQGEDVTHTVRIMKNVPLVIPCK-EPLEVRGEGVISWKEFHALNGTLDEPYAHPRN 182 Query: 201 KVAGLMMRQDDSDTLNS-LGVFVWAWPD---GPQLMSDRLKELATAGFTLTQTYTRAV-K 255 AG + + + + L + G + L+ LA GFT A Sbjct: 183 LAAGSVRKLNAEEVRERGLSFMAFDLISDNLGGSTKWETLRFLAQMGFTTVGYSILAAGA 242 Query: 256 NADEVARVRNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAE 313 + + V + + + E + TDG++ + A+K+ + Sbjct: 243 SEEAVRQAMDFYQPKEYAYPTDGLIFEFNDLAYGRSLGATGHHENRMTAFKWPDTRYETK 302 Query: 314 VKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQG 373 + ++ A ++G IS+ A+ V++D V + ++ + + PGD I V A Sbjct: 303 FRRLEVATTRTGMISLTAAFDDVVIDGTTVNHAYLHNLDNFTRLALGPGDTISVYKANMI 362 Query: 374 IPRIDDVVWRGAERTKPTPPENRFNSLT----------CYFASDVCQEQFISRLVWLGAK 423 IP+I + + P ++L Y ++ C + + + V +K Sbjct: 363 IPQIAENKTKSGGCPLPDVCPCCGSTLVVRQSSGGTRQLYCENEACPARLVRKFVHFCSK 422 Query: 424 QVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQLWHQFNLAR 481 + + G+ E Q ++ L E++ TPG + A+L + + R Sbjct: 423 TRMEIKGLDEQTLTTFVQHGWVKNYGDLYELERHKEEILKTPGFGEKSFARLQNAVDERR 482 Query: 482 KQPFTRWVMAMGIP----LTRAALNASDERSWSQLLFSTEQ--FWQQLPGTGSGRARQVI 535 +++ A+GIP LN SW + + QL G + Sbjct: 483 TCTLNQFIAALGIPEVGRHAGRILNRKFGGSWDAFERAILDQFDFTQLEDFGQVMNDNIY 542 Query: 536 EWKENAQIKKL 546 W + + KL Sbjct: 543 CWYSDEEEAKL 553 >UniRef50_D1BVV0 DNA ligase, NAD-dependent n=3 Tax=Actinomycetales RepID=D1BVV0_XYLCX Length = 830 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 126/717 (17%), Positives = 215/717 (29%), Gaps = 180/717 (25%) Query: 21 VCPAWSPAR-----AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 P S A AQ + L+ ++ Y++ V D YD L + Sbjct: 2 TTPDLSTAELDEQAAQRRWAELRDLVEADQRAYYEHDSPLVSDAEYDARLHELAALEAAH 61 Query: 76 G------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERSD--------L 119 S + V +G V H + + + L W + Sbjct: 62 PALATPESPTQRVGGAAASGFTTVEHVERMLSLDNVFSVDELRDWDARVARDLGAGDVGY 121 Query: 120 WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--LANSTL 177 + K+DG+A+ L+Y G+L +A +RG+G GED T I+ VPQ + G A + Sbjct: 122 LAEVKIDGLAIALLYEHGRLTRAATRGDGRTGEDVTVNALRIADVPQQLDGEGHPALVEV 181 Query: 178 QGEIFLQREGHIQQQM-----------------------------------GGINARAKV 202 +GEIF+ + N R Sbjct: 182 RGEIFIPTASFTRLNELQEELRARVVEDTRARQGARFDEEKARLAALRRFPTFANPRNAA 241 Query: 203 AGLMMRQDDSD----------TLNSLGVFVWAWPD---------GPQLMSDRLKELATAG 243 AG + +Q D + SL ++V SD AT G Sbjct: 242 AGGLRQQLDKKDGLERDAGLARIESLRLYVHGIGALQWEAGEHAELGRQSDAYSYFATWG 301 Query: 244 FTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEW 299 ++ + R V D V + + + ++ DG+VV+ P+ W Sbjct: 302 LPVSP-HNRVVNGIDAVIEMIEHFGAHRHDIEHELDGIVVKVDALPDQQRLGATSRAPRW 360 Query: 300 LVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDI 359 +A+KY P + AIQ VG++G+ + A + PV++ V++ + + + + Sbjct: 361 AIAYKYPPEEVNTRLLAIQVGVGRTGRATPYAVMEPVLVAGSTVRQATLHNQDVVRAKGV 420 Query: 360 APGDQILVSLAGQGIPRIDDVVWRGAERTKP----TPPENRFNS-----------LTCYF 404 GD +++ AG IP I V A+ P P + Sbjct: 421 RVGDVVVLRKAGDVIPEILGPVPAAADDGFPRHDFVMPAQCPECGTPLRPMKEGDVDLRC 480 Query: 405 ASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHI-----FSWLLLTPEQ 458 + C Q R+ +G++ L ++G+GE AL Q LT E+ Sbjct: 481 PNARSCPAQVRGRVEHIGSRGGLDVEGLGEVAAAALTQPLEPADPPLDTEAGLFSLTIEE 540 Query: 459 LQNT---------------PGIAKSKSAQLWHQ----FNLARKQPFTRWV---------- 489 L G+ + SA+L F +PF R V Sbjct: 541 LLPIRVVVRDPETGLPRPYDGVGE--SAELPTADGATFTAKVVRPFQRLVERTYPPGTET 598 Query: 490 ------MAMGIP--LTRAALNASDERSWSQLLFS-------------------------- 515 GI S + +L + Sbjct: 599 MTPAERRKAGIRKDHPVYGPAKSAQVLLDELDRAKTKDLWRQLVSLNIRHVGPVAARALA 658 Query: 516 ------------TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 + + + G G ++ W + + + P Sbjct: 659 DWFGSLDAIRAASSEELAAVEGVGPVIGAELQAWFDVDWHVDIVDSWTRAGVRFATP 715 >UniRef50_A1A200 DNA ligase n=12 Tax=Actinobacteridae RepID=DNLJ_BIFAA Length = 892 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 92/486 (18%), Positives = 174/486 (35%), Gaps = 67/486 (13%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------ 77 + S A +R+ ++ Y+ + D YD L + F S Sbjct: 65 SMSAEAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARLRCLQSLEAQFPSLDSPQS 124 Query: 78 EPRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD-----------LWVQPK 124 V +V HP + + L W + + K Sbjct: 125 PTHRVGGTFSNDFASVRHPSRMMSLDDVFSIEELREWYDGVLRGLDWPESKPLPMTCEVK 184 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP----LANSTLQGE 180 +DG+A+ L+YR+G L + ++RG+G+ GED T V IS +PQ ++GP ++GE Sbjct: 185 IDGLALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTISTIPQNLAGPEEDIPEFVEIRGE 244 Query: 181 IFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP----- 226 +F++ + + N R AG + ++D T L + Sbjct: 245 VFMRWDDFNKLNAENEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGIGSLRWG 304 Query: 227 --------DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVT 276 D S+ + G ++ + R V + E+ + + + + ++ Sbjct: 305 AGHAGNGHDVVNDQSEAYELYKKWGVPVSP-HNREVTSFKEILDMIDYYGEHRGDIEHAL 363 Query: 277 DGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DG+VV+ W +A+KY P E+ I VG++G+++ VA L Sbjct: 364 DGIVVKVDDLGLQRSLGATSRAPRWAIAYKYPPEEVNTELLDITVQVGRTGRVTPVAVLK 423 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK----- 389 PV + V R + + + + GD ++V AG IP + V + + Sbjct: 424 PVYVAGSTVSRTTLHNPFEVERKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREGELRR 483 Query: 390 PTPPENRFNSL-----------TCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 P + + + C Q R++ L +++ ++ +G+ Sbjct: 484 FVMPTRCPSCGAELAPAKEGDKDIRCPNVESCPAQLTERIINLASRKAFDIEHLGDQSAI 543 Query: 438 ALHQTH 443 AL Sbjct: 544 ALTNPE 549 Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 32/95 (33%), Gaps = 8/95 (8%) Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPG 525 + ++ + + AR R ++A+ I A AS + + ++ Q+ G Sbjct: 707 NTRKMLDEMDKARHADLWRVLVALSIRRLGPPTARTIASAFGTLDAIEHASVDELSQIDG 766 Query: 526 TGSGRARQVIEWK---ENAQIK--KLGSWLAAQQI 555 GS A V+ W + A + Sbjct: 767 IGSEIAESVVTWFTAAREPGNWRGAVLDAWKAAGV 801 >UniRef50_C0VZ73 DNA ligase (NAD(+)) n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZ73_9ACTO Length = 806 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 102/497 (20%), Positives = 190/497 (38%), Gaps = 53/497 (10%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA A + L +I Q DY+ D YD L L + + S + Sbjct: 30 PAEATAKWRDLVTEINQMRFDYYNLDAPTASDAEYDVLFEELKDLEAKWPMLVTPDSPTQ 89 Query: 81 DVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMR--------ERSDLWVQPKVDGVAV 130 V + V H + + + A W+ + ++ + KVDG+AV Sbjct: 90 TVGGSAVNTFAPVAHRIPMLSLDDVFSVEATHQWLDRCLTGLGMNQVEILAEVKVDGLAV 149 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGHI 189 +++Y +G L +A +RG+G GED T V IS VP+ ++G A+ ++GEI+ + Sbjct: 150 SILYENGLLTRAATRGDGRVGEDVTANVLTISNVPRQLTGDFPASVEVRGEIYFPIADFL 209 Query: 190 --------QQQMGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP------DGPQLMSD 234 + + +NAR AG + ++D ++T L + P Sbjct: 210 DFNEQRALRGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVCHGIGIYEGGQSQPDSQHA 269 Query: 235 RLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--R 290 ++L G +++ YTR + E+ V + +A+L DG+V + Sbjct: 270 WYEQLKAWGLPVSE-YTRLISTHAEIDEVIEYFGKHRADLSHEIDGMVFKVDSRQYQAAL 328 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 W A+K+ P + I+ VG++G+++ + V++ V + + Sbjct: 329 GTTSRAPRWAAAYKFPPTEVHTRLLDIRTQVGRTGRVTPYGVMEKVLVAGSHVSSATLHN 388 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTK--PTPPENRFNS--------- 399 + + GD +++ AG IP I V + ++ P + + Sbjct: 389 QDEVKRKGVLIGDMVILRKAGDVIPEILGPVESLRDGSERAFVMPSHCPSCGAPLAPAKE 448 Query: 400 --LTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT--HRFEHIFSWLLL 454 + + C Q R+ ++G + ++G+G+ AL Q +RFE I + Sbjct: 449 GDVDLRCPNQASCPAQITQRISFMGGRSAFDIEGLGDESALALTQPEVNRFEVISALAAG 508 Query: 455 TPEQLQNTPGIAKSKSA 471 P L T Sbjct: 509 EPVLLAETDTSEDKTIQ 525 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 3/92 (3%) Query: 471 AQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTG 527 ++ Q A++QP R + A+ I + A RS L ++ + G G Sbjct: 625 TKMLDQLEKAKQQPLWRVLNALSIRHVGPTASQALADHFRSLDALQQASVAELAAVEGVG 684 Query: 528 SGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 A V+ W + K + + AA + + Sbjct: 685 QIIAEAVVAWFQVDWHKHIVNTWAASGVRMED 716 >UniRef50_B4V767 DNA ligase n=1 Tax=Streptomyces sp. Mg1 RepID=B4V767_9ACTO Length = 696 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 133/609 (21%), Positives = 231/609 (37%), Gaps = 62/609 (10%) Query: 5 MAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQL 64 M L S+ PA + E +++++ Y+ +G S ++D YD+L Sbjct: 1 MTTLTAAQALSSTSGTSGPAALTG--RSEYEAALRRLREASQAYYGDGDSVMDDASYDRL 58 Query: 65 SARLTQWQRCFG------SEPRDVM-MPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERS 117 L W+ S V G V H + + D L W Sbjct: 59 RLALLAWETEHPAEVAPGSPTTLVADGAAPAGDVAHTTRLLSLDNVFDAEGLVAWGASVE 118 Query: 118 D---------LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV 168 V+PK+DG AV YR G+L + ++RG+G +GED + + I +P+ + Sbjct: 119 RRLGRAPAGGFTVEPKIDGAAVAARYRGGRLVRIVTRGDGSQGEDISHVIGQIDGLPELL 178 Query: 169 SGPLANSTLQGEIFLQREGHIQQQMG--------GINARAKVAGLMMRQDDSDTLNSLGV 220 +G A ++GE+ +E N R AG + +D L + Sbjct: 179 AGE-ATVEVRGEVAFTQEQFEVANAVRVAHGAPVFANPRNGTAGTLRAKDRPYRLR-MTF 236 Query: 221 FVWAWPD--------GPQLMSDRLKELATAGFTLTQTY---TRAVKNADEVARVRNEW-- 267 + + + ++ L +A AG T V + + + Sbjct: 237 WAYGAVELEGVPFLPAGATQAEALAAVAAAGVRTTAAAGAGLHIVDDLAGAQQAVDAMAA 296 Query: 268 WKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSG 325 +AELP DGVV++ E W +A K V + ++ + + VG++G Sbjct: 297 MRAELPVGIDGVVIKLNDTAEQEAIGSGTRFPYWAIAVKLPAVERQTVLEDVVWEVGRTG 356 Query: 326 KISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI-DDVVWRG 384 ++ A LAPV +D V R + + + D+ GD + V AG IPR+ V Sbjct: 357 VLAPTAVLAPVEIDGSTVTRATLHNPADIRRRDLHIGDTVTVYKAGDIIPRVQAAVALLR 416 Query: 385 AERTKPTP-PENRFNS--------LTCYFA-SDVCQEQFISRLVWLGAKQVLGLDGIGEA 434 KP P PE A C + + + +++L +DG+G+ Sbjct: 417 PAGAKPVPLPETCPRCGGEINTAQERWRCAKGTSCA--LPALIEYAAGREMLDIDGLGKT 474 Query: 435 GWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGI 494 AL + + LT EQL G + ++A+L Q A+ +P +R A+G+ Sbjct: 475 YVAALVDSGDVTDVADLFTLTLEQLTAASGSS-RRAAKLAEQIEAAKARPLSRVFCALGV 533 Query: 495 PLTRAAL---NASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLA 551 T ++ A + + + Q + G G +A ++E + A + + L Sbjct: 534 LGTGRSMSRRIARHFVTMEAIRRADAAEMQDVEGIGPEKAPVIVE--QVAALAPVIDKLI 591 Query: 552 AQQITGFEP 560 A +T EP Sbjct: 592 AAGVTLHEP 600 >UniRef50_C9LC53 DNA ligase, NAD-dependent n=10 Tax=Bacteria RepID=C9LC53_RUMHA Length = 671 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 109/578 (18%), Positives = 204/578 (35%), Gaps = 59/578 (10%) Query: 32 EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMMPP 86 E+I +L + + Y+ E + D YD++ L + ++ G S + V P Sbjct: 11 EKIKQLVDYLNLQRNAYYNENSPNISDAEYDRIFDELVELEKQTGFILSNSPTQTVGYTP 70 Query: 87 LNG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 ++ V HPV + K L + ++ L++ K+DG+ LVY +G L +A + Sbjct: 71 ISELPKVKHPVPLLSLDKTKQVQDLISFAGKQPVLFM-LKLDGLTTKLVYENGTLVEAST 129 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM--------GGI 196 RG+G GE T + VP ++ + GE F+ + + Sbjct: 130 RGDGEIGELITHNIPAYVDVPLSIPYK-GRLVIVGESFIPTHDFERLKETLRDGKGEPYK 188 Query: 197 NARAKVAGLMMRQDDSDTLNS-LGVFVWAWPDGPQLMSDR-------LKELATAGFTLTQ 248 N R +G + D ++ L + +G + L GF Sbjct: 189 NGRNLASGSVRSLDPANCAGRCLHFMPFNVLEGLDSPFLFPDSRAMKISSLFDYGFQPCP 248 Query: 249 TYTRAVKNADEVARVRNE-----WWKAELPFVTDGVVVRAAKEPESR--HWLPGQAEWLV 301 E+ E K LP DG+V+ S+ + + Sbjct: 249 YIAANHPLTSELVNQYIERLTDLAGKKHLP--IDGIVMIFDSLDYSKNCGRTGHHYKDGL 306 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 A+K++ ++ I++ + G+I+ V PV +D V R + ++ +E ++ P Sbjct: 307 AFKFEDETYETTLRNIEWTPTRFGEIAPVGVFDPVEIDGCSVSRATLHNLTFIKELELVP 366 Query: 362 GDQILVSLAGQGIPRIDDVVWRGA--ERTKPTPPENRFNSLTCY--------------FA 405 G +I VS IP I++ + RG + P P + Y Sbjct: 367 GCRISVSKRNMIIPHIEENLERGHYVDAVPPVCP-CCGSQTRIYQRKGNDGRLIETVHCD 425 Query: 406 SDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTP--EQLQNTP 463 + C Q R K+ + ++G+ E + L E++ Sbjct: 426 NPNCDSQIRKRFTHFVGKKAMNIEGLSETTLEKFLTLGYLQTFPDIYHLNEHQEEILQLE 485 Query: 464 GIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASD----ERSWSQLLFSTEQ- 518 G K +LW+ +R F R++++M IP+ + S + + Sbjct: 486 GFGKKSFERLWNSITSSRNTTFVRFLVSMDIPMVGRTKSRILDTVFHGSLQEFFDAASGD 545 Query: 519 -FWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + QL G + + +W + L L + I Sbjct: 546 YDFTQLDDFGDTLNQNIHDWFSDENNLILWHELQKELI 583 >UniRef50_A4SB11 Predicted protein n=2 Tax=Ostreococcus RepID=A4SB11_OSTLU Length = 755 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 116/633 (18%), Positives = 206/633 (32%), Gaps = 125/633 (19%) Query: 44 WDDDYWKEGKSEVEDGVYDQLSARL------TQWQRCFGSEPRDVMMPPLNG----AVMH 93 D Y+ + + + D YD + AR G V P + H Sbjct: 2 HDGKYYNDAEPVISDSEYDGMRARYDAIAAAHPTAAKAGGARARVGATPDGASGLEKIAH 61 Query: 94 PVAHTGVRKMVDKNALSLWMRER----------------SDLWVQPKVDGVAVTLVYRDG 137 V + D + +M+ + +PKVDG + +L Y +G Sbjct: 62 AVPMRSLGNAFDVGQVEAFMKRVEKLRGETEGEAATTTAIEYCAEPKVDGASASLRYENG 121 Query: 138 KLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGHIQQQMG-- 194 +L A+SRG+G GED T+ + VP ++ P A ++GE+ + E + Sbjct: 122 ELVYAVSRGDGEMGEDVTRHLIGARGVPMKLAEPYPAVLEIRGEVHVADEDFQRVNAERA 181 Query: 195 ------GINARAKVAGLMMRQDDSDTLNSLGVFVWAWPD----------GPQLMSDRL-K 237 NAR AG M D L + W + S+ L Sbjct: 182 ATGLRVFKNARNAAAGAMRTLVVDDNQMPLRFLAYGWGAVGASNEETNAPWRTQSEFLSA 241 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRN--EWWKAELPFVTDGVVVRAAKEPES--RHWL 293 L GF + K E+ + E + +P+ DGVV + Sbjct: 242 FLPAQGFDAVP-FLGVAKTIGELIEAYDALEIARPTMPYEIDGVVYKVNSVELQTALGAD 300 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 Q W +A K+ ++ V ++AI+ VG++G ++ VA L PV + + R + + Sbjct: 301 ARQPRWAIAHKFTAMSAVTTLRAIEIQVGRTGALTPVALLDPVDIGGASISRATLHNFDE 360 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDV--------------VWRGAERTKPTPPENRFNS 399 + G Q+ V AG IPR+ + + E P+ + +S Sbjct: 361 IARKHLKVGAQVTVERAGDVIPRVVSLAGDDLAEASAYAEDIKPLPEWLPPSKCPDCGSS 420 Query: 400 L---------------TCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHR 444 + C Q + RL+ A+ L + G+ LH+ Sbjct: 421 VVRAPLSASKTAMGSIVRCTGGLKCPSQSMERLLHFCARDALDIRGLARGTLETLHREGV 480 Query: 445 FEHIFSWLLLT----PEQLQNTPGI------------------AKS-KSAQLWHQFNLAR 481 + L P+ P + +L+ + R Sbjct: 481 VKTPADIFTLERRFGPDSGDAVPTWWRYAGVKNSKGEIKHGSDGLKQSAVKLFQAIEVRR 540 Query: 482 K-QPFTRWVMAMGIPLTR---AALNASDERSW---------------SQLLFSTEQFWQQ 522 + P R++ A+GIP A + A+ S + L + Sbjct: 541 QGVPLHRFIYALGIPNIGAHTAKVLATHYGSLAAFKKAALAAAKGGPASLAHAA---LTH 597 Query: 523 LPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + G G A+ ++++ + + A + Sbjct: 598 VDGVGPVLAQSLVDFWGEPGNAFIVDEIIATGV 630 >UniRef50_A3I2H2 DNA ligase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2H2_9SPHI Length = 791 Score = 483 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 105/466 (22%), Positives = 184/466 (39%), Gaps = 50/466 (10%) Query: 51 EGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMMPPLNG--AVMHPVAHTGVRK 102 E ++ + D +D+L L Q + F S + V V+H + Sbjct: 2 EDQAVISDFEFDKLLEELVQLETEFPDLLQPDSPSQRVGGTITKEFETVVHAYKMLSLGN 61 Query: 103 MVDKNALSLWMRERS--------DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDW 154 K L + + + + K DGVA++LVY +GKL +A++RG+G +G+D Sbjct: 62 TYSKEELIAFDERVQKGLGGNPYEYFCEMKFDGVAISLVYENGKLVRAVTRGDGTRGDDV 121 Query: 155 TQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQMG--------GINARAKVAG 204 T V I +P V G ++GEIFL + N R +G Sbjct: 122 TANVRTIRNIPLYVKGDKIPERFEVRGEIFLPHREFEKINAERNENGEALMANPRNAASG 181 Query: 205 LMMRQDDSDTL-NSLGVFVWAWPD---GPQLMSDRLKELATAGFTLTQTYTRAVKNADEV 260 + QD S L + + G + + + + GF ++ TY R ++V Sbjct: 182 TLKMQDSSVVAKRRLNCYFYQLLGEDIGVNAHDEAISLIESWGFNVSPTY-RKTNTIEDV 240 Query: 261 ARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKA 316 +W + LP TDGVV++ + + W +A+KY+ + E+ + Sbjct: 241 LTYIEDWREKRFTLPLDTDGVVLKINDYEQREELGFTAKNPRWAIAYKYKAESSETELLS 300 Query: 317 IQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPR 376 + + VG++G I+ VA+LAPV L V+R ++ + + + GD + V G+ IP+ Sbjct: 301 VTYQVGRTGAITPVANLAPVSLAGTTVKRASLHNANEIERLGLHTGDVVFVEKGGEIIPK 360 Query: 377 IDDV-VWRGAERTKP-----------TPPENRFNSLTCYFASD-VCQEQFISRLVWLGAK 423 I V + + +KP TP E + + + C Q + R+ K Sbjct: 361 ITGVSLEQRKPDSKPIEYISECPECGTPLERKEGEAKHFCPNASNCPPQVLGRIEHFVHK 420 Query: 424 QVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTPGIAK 467 + + +D +G RAL ++ L L Sbjct: 421 RAMDIDSLGTERIRALIDQGFIQNPADIYDLESKQSDLLGLEMSQD 466 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 48/137 (35%), Gaps = 10/137 (7%) Query: 433 EAGWRALHQTHRFEHIF-SW-LLLTPEQLQNTPGIAKSKSA-----QLWHQFNLARKQPF 485 EA A + I L L+ E + + + + ++KQPF Sbjct: 569 EAILEASKRHGTVHRILLDLDLELSQELRERIKKLKANTFQEGVISNMMEGIAASKKQPF 628 Query: 486 TRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQ 542 + + A+G+ AAL A S +L ++ + ++ G G + + E+ + Sbjct: 629 EKVLFALGVRNIGENTAALLAQHFGSIDKLNEASTEELLEINGVGETLVQSIHEFFSRQE 688 Query: 543 IKKLGSWLAAQQITGFE 559 + S L + Sbjct: 689 NLDIISRLKKSGLQFDA 705 >UniRef50_B8DU32 DNA ligase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=DNLJ_BIFA0 Length = 863 Score = 481 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 98/486 (20%), Positives = 176/486 (36%), Gaps = 69/486 (14%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SE 78 + +A SRL ++ Y+ + D YD L + + F S Sbjct: 43 LNVEQAVRLWSRLSAWVEGDQVAYYVKDAPLSSDAAYDARMNCLKRLESEFPQLDTPQSP 102 Query: 79 PRDVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD-----------LWVQPKV 125 V AV HP + + L W + + K+ Sbjct: 103 THRVGGTFSNDFTAVRHPSQMMSLDDVFSFEELRAWYDGVRKDLEWPEDKLLPMTCEVKI 162 Query: 126 DGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANS----TLQGEI 181 DG+A+ L+YR+G L + ++RG+G+ GED T V I ++P + GP + ++GE+ Sbjct: 163 DGLALNLIYRNGVLTQGLTRGDGVTGEDITMNVRTIHSIPTNLDGPEGDIPDMVEIRGEV 222 Query: 182 FLQREGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP------ 226 F++ + + N R AG + ++D T L + Sbjct: 223 FMRWDDFHKLNEANEDAGRPPFANPRNAAAGSLRQKDPRITAQRHLSFYAHGIGELVWGS 282 Query: 227 -------DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTD 277 D + SD G ++ + R V + D++ + + + ++ D Sbjct: 283 GKPVDVADEVRNQSDAYTMYRKWGVPISP-HNREVTDFDQILDMIEYYGEHRGDIEHALD 341 Query: 278 GVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 G+VV+ W +A+KY P ++ I VG++G+++ VA L P Sbjct: 342 GIVVKVDDLALQRRLGSTSRAPRWAIAYKYPPEEVNTKLLNIVVQVGRTGRVTPVAILNP 401 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TKP 390 V + V R + + + I GD ++V AG IP + V E + Sbjct: 402 VYVAGSTVSRTTLHNAYEVKRKGILIGDTVVVRKAGDVIPELVGPVIAKREGHEQDLREF 461 Query: 391 TPPENRFNS-------------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 P + L C S+ C Q R++ L A++ ++ +G+ Sbjct: 462 VMPTRCPSCDTVLRYEKEGDKDLRCPN-SESCPAQLAERVINLAARKAFDIEHLGDQSAV 520 Query: 438 ALHQTH 443 AL Sbjct: 521 ALTNPE 526 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 38/98 (38%), Gaps = 8/98 (8%) Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPG 525 + ++ + A+ +R ++A+ I A A ++ L ++ + +Q+ G Sbjct: 679 NTRKMLDEIEKAKHTDLSRVLVALSIRHVGPPTAFTLAKHFKTLDALADASAEELEQIDG 738 Query: 526 TGSGRARQVIEWKENAQIK-----KLGSWLAAQQITGF 558 G+ A + + E A++ ++ A + Sbjct: 739 IGAEIADSIATFFEEARMPGNWRGRVLEAWKAAGVGMS 776 >UniRef50_C7H112 DNA ligase n=2 Tax=Clostridiales RepID=C7H112_9FIRM Length = 647 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 97/555 (17%), Positives = 194/555 (34%), Gaps = 41/555 (7%) Query: 33 EISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMMPPL 87 ++ L + + + Y+ + + + YD+L L + G S +V Sbjct: 6 RMNELIDILSKANKAYYSDANEIMSNREYDELYDELQALEEESGIVLAASPTVNVGYEAS 65 Query: 88 NG--AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISR 145 + + H + K + L W+ E+ L PK+DG+ V + Y +G L A++R Sbjct: 66 SSLEKMAHEKKMLSLNKTKSVDELVEWLGEQEGLL-SPKLDGLTVVITYDEGSLKLAVTR 124 Query: 146 GNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG------GINAR 199 G+G++GE T+ +P + L+GE ++ + N R Sbjct: 125 GDGVEGEVITKNAKTFIGIPLKIPYA-GRLVLRGEAYITYGDFNKLNEEIDDAAKYKNPR 183 Query: 200 AKVAGLMMRQDDSDT-LNSLGVFVW----AWPDGPQLMSDRLKELATAGFTLTQTYTRAV 254 +G + D S T + V+ G + +K L GF + T Sbjct: 184 NLCSGSVRNLDPSITKERRVRFKVFSMLGGIEHGFNKKRECMKWLGDIGFDVVHTEMVTG 243 Query: 255 KNADEVARVRNEWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWKYQPVAQVA 312 +N + E + DG+V+ + +A+K+ Sbjct: 244 ENLKDTMNSLMEELQNG-DIPVDGLVLTYDDIKTCNLLGETAKYPKDSIAFKWSDELYDT 302 Query: 313 EVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQ 372 E+ +++ ++G ++ VA +PV + V+R + ++ + GD+I V A Sbjct: 303 ELTGVEWNTSRTGLVNPVAVFSPVEISGTTVKRAALHNLDILDGLALGKGDKIRVYKANM 362 Query: 373 GIPRIDDVVWRGAERTKPTPPENRF--------NSLTCYFASDVCQEQFISRLVWLGAKQ 424 IP++ + + R P + +D C + R+V K Sbjct: 363 IIPQVYENITRSGNIEYPKVCPVCGCGLKLETEGARVLRCVNDDCPAKNAKRIVHFAGKS 422 Query: 425 VLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQLWHQFNLARK 482 + + GI E L T + L + +++ G + L + A+ Sbjct: 423 GINIKGISEKTIEKLIATGIIRNEVDLLDIENYKDEILKLDGFKEKSFENLKKAIDGAKT 482 Query: 483 QPFTRWVMAM---GIPLTRAALNASDER-SWSQLLFSTEQFWQQLPGTGSGRARQVIEWK 538 R++ AM GI T A A+ +L T + + G G + Sbjct: 483 MTLQRFISAMAFTGIGYTNAGKIAAALGFDVMKLFELTPEKINNIEGLGEVLTESFMAEL 542 Query: 539 ENA----QIKKLGSW 549 + +++++ Sbjct: 543 SDENMKRRMREIIKR 557 >UniRef50_B7GPV4 DNA ligase n=6 Tax=Bifidobacteriaceae RepID=DNLJ_BIFLI Length = 921 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 92/486 (18%), Positives = 170/486 (34%), Gaps = 67/486 (13%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------ 77 + A +R+ ++ Y+ + D YD L + + F S Sbjct: 56 TMTAEAAARLWARVAAWVESDQIAYYIDDSPVSSDAAYDARMRCLERLEAAFPSLDNPQS 115 Query: 78 EPRDVMMP--PLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD-----------LWVQPK 124 V +V HP + + L W + + K Sbjct: 116 PTHRVGGSFSNDFVSVRHPSRMMSLDDVFSIEELKDWYDSVIRDLDWPESKPLPMSCEVK 175 Query: 125 VDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP----LANSTLQGE 180 +DG+A+ L+YR+G L + ++RG+G+ GED T V I ++P + GP ++GE Sbjct: 176 IDGLALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTIGSIPANLGGPKEDVPDFVEIRGE 235 Query: 181 IFLQREGHIQQQ--------MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP----- 226 +F++ + N R AG + ++D T L + Sbjct: 236 VFMRWDDFHTLNNEQEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGLGQLTWG 295 Query: 227 --------DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVT 276 D S G ++ + RAV + E+ + + + ++ Sbjct: 296 ADHPRGTHDVVADQSQAYDLYTRWGVPVSP-HNRAVTSFQEILDMIEYYGEHRGDIEHAL 354 Query: 277 DGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA 334 DG+VV+ W +A+KY P E+ I VG++G+++ VA L Sbjct: 355 DGIVVKVDDLGLQRTLGATSRAPRWAIAYKYPPEEVNTELLNITVQVGRTGRVTPVAVLK 414 Query: 335 PVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER-----TK 389 PV + V R + + + + GD ++V AG IP + V + + Sbjct: 415 PVYVAGSTVARTTLHNGFEVKRKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREDQLRE 474 Query: 390 PTPPENRFNSL-----------TCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 PE + + + C Q R++ L +++ ++ +GE Sbjct: 475 FVMPEFCPSCGAKLAPAKEGDKDIRCPNVESCPAQLTERVISLASRKAFDIEHLGEQSAI 534 Query: 438 ALHQTH 443 AL Sbjct: 535 ALTNPE 540 Score = 79.5 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 8/99 (8%) Query: 469 KSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPG 525 + +++ + + AR R ++A+ I A L AS S + + +T + + G Sbjct: 736 NTRKMFDEMDKARHADLWRVLVALSIRRLGPPTARLIASAMGSLAAIEKATIEDLTAIDG 795 Query: 526 TGSGRARQVIEWKEN-----AQIKKLGSWLAAQQITGFE 559 G A V+ W A + E Sbjct: 796 VGPEIAESVVNWFAATREPGDWRGATLRAWQAAGVGVDE 834 >UniRef50_A7B8R1 DNA ligase n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7B8R1_9ACTO Length = 777 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 90/476 (18%), Positives = 173/476 (36%), Gaps = 53/476 (11%) Query: 24 AWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------S 77 + ++ + L +I + Y+ + D YD++ + + + + S Sbjct: 6 DSTFETTRDRYNDLVDRINEARAAYYDRDSPTLADADYDRMYREVEEIEERYPQLRGADS 65 Query: 78 EPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE--------RSDLWVQPKVDG 127 V +G V H + + L+ W ++ + KVDG Sbjct: 66 PTMSVGGSVDSGFSEVRHLAQMMSLDDVFSLEELAGWETRMAEATGISDLEMTTEVKVDG 125 Query: 128 VAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQRE 186 +++ L+Y +G+L +A +RG+G GED T I+++PQT+SG ++GE++ Sbjct: 126 LSINLLYENGRLVRAATRGDGYVGEDVTANARTIASIPQTLSGTVPTRIEVRGEVYFPVA 185 Query: 187 GHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP--------DGP 229 +NAR AG + ++D ++T L + P Sbjct: 186 DFAAFNEARVEAGEKTFVNARNAAAGSLRQKDPAETAKRPLAMVAHGIGFVEAGEDFTEP 245 Query: 230 QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEP 287 ++L G ++ YTR + + E + +L DGVVV+ Sbjct: 246 ITQMGWYEQLRDWGLPVSP-YTRVLTGRKAIEERIAELGEKRHDLEHEIDGVVVKINDLD 304 Query: 288 ES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQR 345 W A+K+ P + I+ VG++G+++ + V++ V R Sbjct: 305 LQRSLGSTSRTPRWAAAYKFPPEEVHTRLLDIRVQVGRTGRVTPYGVMESVLVAGSNVAR 364 Query: 346 VNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVW--RGAERTKPTPPENRFNS---- 399 + + + + GD +++ AG IP I V R P + Sbjct: 365 ATLHNAQEVARKGVLIGDLVVLRKAGDVIPEIVAPVEDARNGSERPFVMPTECPSCGTTL 424 Query: 400 -------LTCYFASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEH 447 + + C Q RL +GA+ L ++G+G+ A+ Q Sbjct: 425 VQEKEGDVDLRCPNKGLCPAQITERLAHVGARSALDVEGLGDESALAMTQPENDRD 480 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 3/104 (2%) Query: 459 LQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFS 515 + A + ++ + A+ QP R ++A+ I A A S L + Sbjct: 584 FEPIEPTASKGTEKMLVELEKAKSQPLARVLVALSIRHVGPTAARALAEKFLSMDALRAA 643 Query: 516 TEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + + + G G R + +W ++ A + + Sbjct: 644 SVEELSAVEGVGEEIGRSLRDWFTVDWHLEVLQAWARAGVRMAD 687 >UniRef50_C1MVF8 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MVF8_9CHLO Length = 887 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 119/710 (16%), Positives = 201/710 (28%), Gaps = 172/710 (24%) Query: 16 SSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 + WA A + ++ L + I + D+ Y + D YD RL + Sbjct: 70 AQAWAS--ALPASEVPAAMASLAEFISRADEAYHNDADPVASDAAYDATRLRLEALEALH 127 Query: 76 G------SEPRDVMMPPLN----GAVMHPVAHTGVRKMVDKNALSLWM------------ 113 S V P V H V + D + + ++ Sbjct: 128 PAMIREDSPIGAVGAKPAAWSALPQVEHAVPMRSLGNCFDDDDVRAFVARVTRALGPPER 187 Query: 114 -----RERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV 168 R +PK+DG + +L Y DG L A SRG+G GED T+++ I P T+ Sbjct: 188 FDDDARAPLRFCAEPKIDGASASLRYVDGVLVVAASRGDGEVGEDVTRQIGGIPGAPTTL 247 Query: 169 SGP----LANSTLQGEIFLQREGHIQQQM--------GGINARAKVAGLMMRQDDS---- 212 +G A ++GE+F+ + +AR AG M R + Sbjct: 248 TGRAGDWPATLEIRGEVFIADDDFAALNARREARGMPTFKSARNAAAGAMRRLEPPSRDG 307 Query: 213 -DTLNSLGVFVWAWPD--------GPQLMSDRLKELATAGFTLTQTYTRAVKNADEVAR- 262 D L + W + L L G + T + + Sbjct: 308 ADAGRYLRFLAYGWGEVKPQTELLPWSSQRAFLASLPALGLSPVPTLGPITDDVAALVAG 367 Query: 263 --VRNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQ 318 E +A L + DGVV + W A K+ V ++A+ Sbjct: 368 SHAALERDRASLGYRVDGVVYKVDDVASQRILGADSRAPRWATAHKFAAETAVTTLRAVD 427 Query: 319 FAVGKSGKISVVASLAP-VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 VG++G ++ VA+L P V L V R + + + G +++V AG IPR+ Sbjct: 428 VQVGRTGALTPVATLDPPVALGGATVTRATLHNFEDVARKGLRLGARVVVERAGDVIPRV 487 Query: 378 DDVVWRGAER----TKPTPPENRFNSLT-------------------------------- 401 VV G E PT ++++ Sbjct: 488 VRVVAEGEEEGAVVATPTRCPACGSAVSKTPLAASVKCPKKRLSSPYESGDAASSSFAAV 547 Query: 402 ---------------------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALH 440 C Q + R+ ++ L + G+ L Sbjct: 548 DDESEDATSSPSSSSSSAAVLRCTGGWRCPAQALERVAHFASRDALDVRGLARKQIADLL 607 Query: 441 QTHRFEHIFSWLLLTP--EQL------------------------------QNTPGIAKS 468 + E L G K Sbjct: 608 DAGVIASPADLFTMRARFEHLGVDPDASGEDDDARGDGGGVAVPEFWTYASGKDEGKLKR 667 Query: 469 KSAQLWHQF-NLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLL----------- 513 + +L+ A P R++ ++GIP A L + R+ Sbjct: 668 SAKKLFDALDETAAGVPLHRFIYSLGIPQVGLTTAKLLSRKYRTLDAFRDAAEEAAAAKA 727 Query: 514 --------FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + + G G A + E+ + + + Sbjct: 728 AASADAAASTEAPAMTDIDGIGPVVAATIGEFWSERANVNVVDDMLRNGV 777 >UniRef50_Q98QH2 DNA ligase n=2 Tax=Mycoplasma pulmonis RepID=DNLJ_MYCPU Length = 679 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 106/581 (18%), Positives = 211/581 (36%), Gaps = 63/581 (10%) Query: 36 RLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAV---- 91 L +++K ++ Y+ + +S V D YD L + F E V + +V Sbjct: 14 ELNEKLKLYNHHYYNKNESLVSDEYYDAKLLELENIRDNFPEEYNQVFQKDFSKSVLEKV 73 Query: 92 -------------MHPVAHTGVRKMVDKNALSL-------WMRERSDLWVQPKVDGVAVT 131 H + K L ++ +Q K+DGV+++ Sbjct: 74 NHLDEQDVKLKKEKHQKLMLSLNKAYSFEDLERYTNRINTFVGNNHQYILQEKIDGVSIS 133 Query: 132 LVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ 191 L Y +G L KA++RG+G+ GE+ T I +P+T++ N L+GEIF + Sbjct: 134 LYYENGILTKALTRGDGIYGENVTHNALNIKDIPKTINIK-ENIELRGEIFFSLKLFESL 192 Query: 192 QMGG-------IN-----ARAKVAGLMMRQDDSDTLNSLGVFVWAWPDG----PQLMSDR 235 + N R K +G++ +D + L F++ + Sbjct: 193 KNEFLDKQDGTKNKKWNTPRNKASGILKSLKTTDESSWLSCFIYEVVSPENFNLKTQKQL 252 Query: 236 LKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPES--RHWL 293 L GF L + +N E ++ + + DG+V++ Sbjct: 253 FDFLKIQGFNLPKFEFIENENLIENFITNFKFEDDQRDYEIDGLVIKLNDLSLYDLLGKT 312 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 +A+K++ + +++ I VG++G I+ A L V+L+ K++ + + Sbjct: 313 SKFFHHSIAYKFRKKFVMTKIEDIFVTVGRTGLITYNAKLQEVVLNGSKIKAATLHNYEY 372 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS----------LTCY 403 + I GD++ + AG+ IPR+ +V ++ +P E + L + Sbjct: 373 IKNIKINIGDKVYIEKAGEIIPRVVKLVSPKNDQNYFSPIEFCPSCKNKLSWSENMLNQF 432 Query: 404 FASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLT--PEQLQN 461 + C E+ I +L + +K + + +G + I L + L Sbjct: 433 CLNPDCIEKKIQKLKYFVSKDGMEIQELGGKKIELFFAKGWVKKIEDIYNLKNNYDDLLK 492 Query: 462 TPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDE--------RSWSQLL 513 + L H+ ++ + + A+GI L S ++ LL Sbjct: 493 LENFQEHSVNVLLHKIEESKDVYTWKLIAALGIKNIGKKLAKSLVKIIFENDQKNLLSLL 552 Query: 514 FSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQ 554 ++ GS + + E+ N + + L +L Sbjct: 553 EFNYDELEKYDEFGSVKIESLKEFFANDENRNLIQFLDQNG 593 >UniRef50_C1RHH0 DNA ligase, NAD-dependent n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RHH0_9CELL Length = 824 Score = 473 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 101/474 (21%), Positives = 173/474 (36%), Gaps = 60/474 (12%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPR 80 PA + + L +QI+ Y+ D YD+ L + + S + Sbjct: 14 PAEVRHRWTALAEQIRADQFAYYVRDAPSSSDAAYDERMRELERLEDEHPGLRTPDSPTQ 73 Query: 81 DVMM--PPLNGAVMHPVAHTGVRKMVDKNALSLWMRER---------SDLWVQPKVDGVA 129 V AV H + + L W + + K+DG+A Sbjct: 74 QVGGTFSTEFTAVDHVERMLSLDNAFSREDLVAWAERVQRDLESTVPVEYLCELKIDGLA 133 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLA----NSTLQGEIFLQR 185 + L+Y G+L +A +RG+G GED T V IS +P + G A ++GE+FL Sbjct: 134 IALLYEKGRLVRAATRGDGRTGEDVTLNVRTISTIPDVLGGDPATHPDVIEIRGEVFLPV 193 Query: 186 EGHIQQQM--------GGINARAKVAGLMMRQDDSDTL-NSLGVFVWA-----WPDGPQL 231 + N R AG + ++D T L ++ W DG Sbjct: 194 DAFRALNEAQVAAGRAPFANPRNAAAGSLRQKDPRVTAARPLRMYAHGIGALTWGDGRGT 253 Query: 232 ----MSDRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAK 285 S LA G + T+TR V + DEV + ++ DGVVV+ Sbjct: 254 GIDRQSQVYDLLAGWGVPTS-THTRVVGSLDEVWDRVAHFGEHRHDVEHEIDGVVVKVDD 312 Query: 286 EPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKV 343 W +A+KY P + AI+ +G++G+ + A + PV++ V Sbjct: 313 IALQRRLGATSRAPRWAIAYKYPPEEVNTRLLAIELGIGRTGRATPFAVMEPVLVAGSTV 372 Query: 344 QRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE----RTKPTPPENRFNS 399 ++ + + + + GD +++ AG IP I + + R + P + Sbjct: 373 RQATLHNQDVVKVKGVRVGDMVVLRKAGDVIPEIVGPAPQAPDDDVPRVEWHMPADCPEC 432 Query: 400 -----------LTCYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 + + C Q RL +G++ ++ +GE AL Q Sbjct: 433 GTPLRPMREGDVDLRCPNAQGCPAQVRGRLEHIGSRGAFDIEVLGEVTAAALTQ 486 Score = 78.7 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 38/135 (28%), Gaps = 45/135 (33%) Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLF------------ 514 + L Q +LA+ + R ++A+ I A A + S + L Sbjct: 586 ARTLLDQLDLAKTKELWRAIVALSIRHVGPTAARALAQEFGSMAALRAVVDPTARGAVDA 645 Query: 515 --------STEQFWQQ----------------------LPGTGSGRARQVIEWKENAQIK 544 + + + G G AR +++W + Sbjct: 646 PQEAVDGGAVADDAVEGSIADEDGAPAADAAAVARLAGVEGVGPTIARSLLDWFAEPWHR 705 Query: 545 KLGSWLAAQQITGFE 559 ++ AA + + Sbjct: 706 EIVDRWAAAGVVMQD 720 >UniRef50_B4DB60 DNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB60_9BACT Length = 658 Score = 471 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 98/444 (22%), Positives = 170/444 (38%), Gaps = 43/444 (9%) Query: 115 ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP--L 172 E+ + V+PKVDG+AV+L+Y +G + +RG+G +G++ T + + ++P + G Sbjct: 5 EQLEWLVEPKVDGLAVSLLYENGVFTRGATRGDGERGDEITDNLKTLRSIPLRLHGKGAP 64 Query: 173 ANSTLQGEIFLQREGHIQQ--------QMGGINARAKVAGLMMRQDDSDTL-NSLGVFVW 223 ++GE++L G + + NAR AG + + D + L + ++ Sbjct: 65 EVLEVRGEVYLPVAGFQRIREEMIAAGEEPFANARNTAAGTLKQLDPALVAKRPLEIVLY 124 Query: 224 AWP----DGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTD 277 D P + L+ + G +TR A+EV + +E + F TD Sbjct: 125 GLGEISVDPPPTQAALLEWMKAFGLRT-PKFTRVCHTAEEVMKAIDELDSIRDGFGFETD 183 Query: 278 GVVVRAAKE--PESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAP 335 G V++ E + +W AWKY +++I VG++G ++ VA L P Sbjct: 184 GAVIKLNSIEQRERVGYHSRAPKWAKAWKYVSEQAETVLESITIQVGRTGVLTPVAELRP 243 Query: 336 VMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE--RTKPTPP 393 V L + R + + + DI GD +L+ AG+ IP + VV P Sbjct: 244 VFLRGSTISRATLHNEDEIKRKDIRIGDTVLIEKAGEVIPAVVKVVLEKRPSSAQPFPFP 303 Query: 394 ENRFNSLT----------CYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH 443 + + C Q RL + + L +DG+G L + Sbjct: 304 HECPVCHSQAKRDPNFAVWVCENVNCPAQLTRRLEYFAKRGALDIDGLGGIVADKLVERS 363 Query: 444 RFEHIFSWLLLTPEQLQNT--------PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L EQL + + ++ A+ QP RW+ A+ IP Sbjct: 364 LVRDPLDLFELKLEQLATLNLGTDDEPRVFGEKNATKVTEAIKRAKTQPLARWLHALAIP 423 Query: 496 LTRAAL---NASDERSWSQLLFST 516 A S + S Sbjct: 424 EVGEETAHDLAKHHPSLEAVRDSA 447 >UniRef50_C7MDQ2 DNA ligase n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDQ2_BRAFD Length = 871 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 104/518 (20%), Positives = 176/518 (33%), Gaps = 92/518 (17%) Query: 16 SSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF 75 + P + AQ+ I+ L +I+Q DY++ + D YD+L L + Sbjct: 7 VTTNEQGPRTADETAQQRIAALTARIEQARVDYYEHDAPTMADAEYDELEKELRALEEAN 66 Query: 76 G------SEPRDVMMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRE-------RSDLW 120 S R V G + H + + L W Sbjct: 67 PQLAAEDSPTRTVGGAAAAGLPTIDHAERMQSLDNVFSLEELREWCAHAAAELGGEVRYL 126 Query: 121 VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSG--PLANSTLQ 178 + K+DG+A+ L Y G+L A +RG+G GED T I +PQ +SG A ++ Sbjct: 127 TELKIDGLAINLRYEHGELVTAATRGDGRTGEDVTVNALQIDGIPQRLSGSGHPALVEVR 186 Query: 179 GEIFLQREGHIQQQM------------------------------------------GGI 196 GE+F+ + Sbjct: 187 GEVFMPTADFERLNDLQVELRERAVAESRTRWESRQGSGRRPFDEQRESLAAARRFPTFA 246 Query: 197 NARAKVAGLMMRQDDSDT----------LNSLGVFVWA---WPDGP-QLMSDRLKELATA 242 N R AG + +Q D L +L + V WPD P S+ + LA+ Sbjct: 247 NPRNTAAGGLRQQLDKKEGLEREAGEARLAALRLTVHGLGAWPDPPVGSQSEMYELLASW 306 Query: 243 GFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRAAKEPES--RHWLPGQAE 298 G + Y V + DEVA + +L DG+VV+ + Sbjct: 307 GLPTS-RYMDVVDSIDEVAAYVEHHGEHRHDLEHEIDGIVVKVDSFAQQRALGSTSRAPR 365 Query: 299 WLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWD 358 W +A K+ P ++ IQ VG++G+++ + PV + V++ + + + Sbjct: 366 WAIAVKFPPEEVTTKLLDIQVQVGRTGRVTPFGVMEPVTVAGSTVEKATLHNQFDVERKG 425 Query: 359 IAPGDQILVSLAGQGIPRIDDVVWRGAERTK-----PTPPENRFNSLT--------CYFA 405 + GD I++ AG IP I V + ++ P + Sbjct: 426 VLIGDTIVLRKAGDVIPEILAPVESLRDGSERPFVMPAQCPACGTEIRPEREGDKDWRCP 485 Query: 406 SD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 + C Q R+ G++ ++ +GE AL Sbjct: 486 NQRDCPAQVTGRVEHAGSRGAFDIESLGEESAIALTDP 523 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 41/163 (25%), Gaps = 44/163 (26%) Query: 441 QTHRFEHIFSWLLLTPEQLQNTPGIAK--------------------------------- 467 Q LTPE L+ Sbjct: 587 QQGVITTGADLFDLTPEGLEGVFVWQPERRNGEPTGDWRIQPAFWSRPQFRHYKRDEEWR 646 Query: 468 --------SKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFST 516 + L + A+ QP R ++A+ I A A+ S + ++ Sbjct: 647 QQKAPSVLKSTEVLISELEKAKSQPLWRVLVALSIRHVGPTAARSLATAYGSMDAIREAS 706 Query: 517 EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 + G G A V+EW ++L A + + Sbjct: 707 VEQLSDTDGVGEIIAEAVVEWFAVDWHRELVDGWARSGVRMAD 749 >UniRef50_C5VLG0 Putative DNA ligase n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VLG0_9BACT Length = 673 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 101/576 (17%), Positives = 208/576 (36%), Gaps = 49/576 (8%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRDVMM 84 +EI L Q+ D Y+ + D +D +L + + G S ++V Sbjct: 1 MNKEIQSLVNQLNAASDAYYNGRDELMTDYEWDAAFDKLKKLEEETGIILPDSPTQNVSA 60 Query: 85 PPLNGAVM-HPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAI 143 + G H + K L+ W + +W+ K+DG+ + + Y +GKL K + Sbjct: 61 DNVAGKKEEHEFPALSLAKTKKVEDLAKWAENKP-IWLSWKLDGLTLVVTYDNGKLTKVV 119 Query: 144 SRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ----MGGINAR 199 +RGNG G + T + I + QT+ + ++GE + Q N R Sbjct: 120 TRGNGHIGTNITHLSTAIDGILQTIPYK-GHLVIRGEAVISYPDFEQFNMEAEEEYANPR 178 Query: 200 AKVAGLMMRQDDSDT----LNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK 255 +G + +D ++ L + + + R++ L GF + Sbjct: 179 NLASGSLTLKDINEVKARHLRWIPFTLVYTEEEINSWGGRMEWLEHQGFRVVDRELIEQP 238 Query: 256 NADEVARVRNEWWK-------AELPFVTDGVVVRAAKEPESRHWLP---GQAEWLVAWKY 305 + + V + W + + P+ DG+V+ + A+K+ Sbjct: 239 TVNNIEAVIHHWTERVTGVSSSPFPYPVDGLVISYEDTVYAATGSVTGHHATRAGYAFKW 298 Query: 306 QPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA-PGDQ 364 Q + E+ I+++ S IS VA P+ L+ V+R ++ ++ + I G + Sbjct: 299 QDESAETELDYIEWSCAAS-TISPVAVFRPIELEGTTVKRASLCNISECERLGIGDKGTK 357 Query: 365 ILVSLAGQGIPRIDDVVWRGAERTKPTPPENR-----------FNSLTCYFASDVCQEQF 413 I V A + IP++ +V+ P + T + + C + Sbjct: 358 IAVIKANKIIPKVINVIESVGTFHIPETCPVCHSATEVSESEVSGTRTLHCTNTHCPAKQ 417 Query: 414 ISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPE--QLQNTPGIAKSKSA 471 + + +K+ + +DG+ E + LT +L+ G Sbjct: 418 LKKFGRFVSKEGVNIDGLSEQTVQKFINLGWVREYADLFHLTEHATELRTMEGFGNKSVT 477 Query: 472 QLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSW-------SQLLFSTEQFWQQLP 524 +L AR R + A+ IPL + ++ + + + E + + Sbjct: 478 KLLAAIEKARNVEARRLLFALNIPLVGQDVCNRLLSAYPLEELIKTAIESAAEDVFSTIA 537 Query: 525 GTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 G G ++ + W ++ + + L A+ + +P Sbjct: 538 GIGPEKSASFVRWMKDTDNQSMLQHLLAE-LNVSQP 572 >UniRef50_D0WS37 DNA ligase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WS37_9ACTO Length = 799 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 100/545 (18%), Positives = 186/545 (34%), Gaps = 65/545 (11%) Query: 29 RAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDV 82 A+E + + + Y + V D YD+L L + + S + V Sbjct: 13 DARERWNEIAPLVSSAQRAYHSGDEPIVTDEHYDRLVRELRRLEAEHPELAVDSSPAQSV 72 Query: 83 MMPPLNG--AVMHPVAHTGVRKMVDKNALSLWMRERS---DLWVQPKVDGVAVTLVYRDG 137 P G V H ++ + + L W + + K+DG+AV L Y G Sbjct: 73 GAPAAAGFENVAHLERLYSLQDVFTLDDLKEWYEGTAGAARCTAEVKIDGLAVNLRYVGG 132 Query: 138 KLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGHIQQQ---- 192 +L +RG+G+ GED T V IS+VPQ++ G ++GE+F+ Sbjct: 133 ELVVGATRGDGVTGEDVTANVRTISSVPQSLRGDFPDVVEIRGEVFIPLAKFDSFNARQR 192 Query: 193 ----MGGINARAKVAGLMMRQDDSDTL-NSLGVFVWAWP----------DGPQLMSDRLK 237 N R AG + ++D L + + Sbjct: 193 AAGLKEFANPRNAAAGSLRQKDPKVAAERPLDFIAHGAGRIDGTSSAVDEKLASQKGLYE 252 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPES--RHWL 293 G ++ Y R V + D+V E+ +++L DG V + E Sbjct: 253 LFQEWGVPVSP-YVRLVSSWDDVEGFVREYADLRSDLIHGIDGAVFKIDSRAEQEDLGAT 311 Query: 294 PGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRR 353 W VA+KY P + I+ VG++G+++ A + PV + V + + + Sbjct: 312 SRVPRWAVAYKYPPEEVETRLLDIKVQVGRTGRVTPFAVMKPVTVAGSTVAQATLHNPSE 371 Query: 354 WQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE--RTKPTPPENRFNS-----------L 400 + GD ++V AG IP + V + + T P + + Sbjct: 372 VARKGVLIGDVVVVRKAGDVIPEVLGPVSALRDGSEREWTMPSACPSCGTELAPAKDGDV 431 Query: 401 TCYFASD-VCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQL 459 + C Q R+ ++G++ L ++ +GE L R + + + Sbjct: 432 DIRCPNARSCPAQLAERVAYIGSRAALDVEALGEETSLWLTDPER-RRPDALMAFAEGRK 490 Query: 460 QNTPGI-AKSKS-----AQLWH--------QFNLARKQPFTRWVMAMGIPLTRAALNASD 505 G ++++ +L + + GIP + +S+ Sbjct: 491 LYIEGEDGRTRAVCAPTEKLRELGVVDHDGAIIDSEHIVAPDVQRSFGIPAPQTPALSSE 550 Query: 506 ERSWS 510 + Sbjct: 551 AGLFE 555 Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 38/108 (35%), Gaps = 4/108 (3%) Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQ 511 P +L + + + AR + R ++A+ I A AS S S Sbjct: 598 KPAELASPSKPG-KMIELVVAELQAARTKELWRKIVALSIRHVGPTAAKAIASSFGSLSA 656 Query: 512 LLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFE 559 ++ + Q+ G G A+ ++W + ++ A + + Sbjct: 657 AREASVEEMAQIDGVGRVIAQSFLDWFDVPWHTEIVEAWEAAGVVFAD 704 >UniRef50_B3FJJ3 Putative DNA ligase n=1 Tax=Pseudomonas phage 201phi2-1 RepID=B3FJJ3_9CAUD Length = 695 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 100/583 (17%), Positives = 213/583 (36%), Gaps = 70/583 (12%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG------SEPRDVMM 84 + E L ++I+ ++ Y+ S + D +YDQL L ++ S + V Sbjct: 4 RHEYDVLCKRIRHYNYMYYVLDISIIPDSLYDQLLISLKLLEKEHPEWVTRDSPTQTVGH 63 Query: 85 PP---LNGAVMHPVAHTGVRKMVDKNALSLW------------MRERSDLWVQPKVDGVA 129 P V + + + W E +++ + K+DG++ Sbjct: 64 PVYESHFELVKRVKPMLSLDNLFTCDEAVDWSIDIHGDIYVGKKDESAEIVAEWKMDGLS 123 Query: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP-LANSTLQGEIFLQREGH 188 + + Y + A +RG+G GED T ++ +P+ + P +++GE+ ++ + Sbjct: 124 LDVNYTYDTMELASTRGDGTTGEDVTPNAMVVEGIPRVLKTPRHGGVSIRGEVVVRLADY 183 Query: 189 IQQQ--------MGGINARAKVAGLMMRQDDSDT-LNSLGVFVWAW----PDGPQLMSDR 235 Q N R AG + ++D T L ++ D D Sbjct: 184 NQINADLEAAGKKTFANPRNYAAGSLRQKDPRITRERKLVFVAYSVERTLGDPEATWYDD 243 Query: 236 LKELATAGFTLTQTYTRAVKNADEVA----RVRNE--WWKAELPFVTDGVVVRAAKE--P 287 L GF T R + + + E ++ PF DG+V + K Sbjct: 244 QAWLKENGFYTADTGKRLSHDQRGMTSGFPALIAECQAERSSYPFEVDGIVFKVVKHTHR 303 Query: 288 ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 E+ + W A+K+ + ++ VG++GK++ +A + P+ + + V Sbjct: 304 ETLGYTSRFPRWGRAYKFPASKGETRLISVDRQVGRTGKLTPMARIEPIHVHGTTISNVT 363 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT---KPTPPENRFNSLTC-- 402 I +++ ++ + G + +S AG IP ++ + + + Sbjct: 364 IHNLKELEQHKLFEGCYVEISRAGDVIPYLERRITDHNGEKLYGEVEACPCCGTKVVVVH 423 Query: 403 --------------YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHR--FE 446 Y + C+++ ++ L++ + VL + G+G+ L+ Sbjct: 424 GKKTKENPEGSRTEYCPNTKCKDRQVAHLLYCTQRHVLNIKGLGDELVMDLYNAGVVDVT 483 Query: 447 HIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFN-LARKQPFTRWVMAMGIPLT---RAALN 502 S L+L E G ++ + +L + TR + A+GI A Sbjct: 484 RPLSLLMLKHEDFLKI-GQSERMAEKLAMAVTIASANLDLTRVITALGISGAADGTAERL 542 Query: 503 ASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKK 545 A + R+ ++ +T ++ G A+ + E+ + +K Sbjct: 543 AREIRTLEEISIATIDRMLEIDDIGDVTAQSIFEFF-DEDNRK 584 >UniRef50_A9F3W3 DNA ligase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=DNLJ_SORC5 Length = 676 Score = 463 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 116/580 (20%), Positives = 214/580 (36%), Gaps = 53/580 (9%) Query: 26 SPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMP 85 + + + I L ++I+++ Y+ G E+ D +D L L V Sbjct: 21 TDPKHKARIEELAERIEKYRASYY-AGHPEISDAAFDALEDELRALDPAHP-VLARVGSA 78 Query: 86 PLN---GAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQ-------------------- 122 L H + + K+V ++ L W+ ++ V+ Sbjct: 79 SLITEWEKARHEIPMGSLNKVVSEDELLGWVARCDEILVKDGHGDGGTGAAPPAPGSISS 138 Query: 123 --------PKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLAN 174 K+DG+++ ++Y+ GKL AI+RG+G GE T V+ + +P + Sbjct: 139 VAGDLFVAEKLDGISIEVIYKGGKLVDAITRGDGEWGERITANVARMKGIPSRIREK-GR 197 Query: 175 STLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMS- 233 +++GEI L+ + G + R AG R D V + D ++ + Sbjct: 198 LSVRGEIILRLSDMKRHFPGVTSPRNMAAGAAKRFD-GQGAEHCTVLFYDVADHLEIPTC 256 Query: 234 -DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPES--R 290 R L GF QT +V++ ++ R + +A L + DG+VV Sbjct: 257 RARFAWLRELGFATPQTAHGSVEDVVKLYRRYSSELRAGLDYEIDGLVVYVDSLHVQGLL 316 Query: 291 HWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGS 350 + + VA+K+ A+V V AIQ+ G SG+++ VA + PV L V+R ++ + Sbjct: 317 GDVNRRPRGAVAFKFASPAKVTTVVAIQWDTGPSGRVTPVAIVEPVELAGANVRRASLHN 376 Query: 351 VRRWQEWDIAPGDQILVSLAGQGIPRIDDVV-WRGAERTKPTPPENRF-----NSLTCYF 404 + I GD++LVS IP +++VV RG P+ Sbjct: 377 SANVRSLGIGVGDEVLVSRRNDVIPYVEEVVEKRGPVAVPPSVCPVCSAPLVVEGEYLLC 436 Query: 405 ASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPG 464 + C+ R+ +G G+ + LT + + + Sbjct: 437 RNAACRALIEGRIHNWI--DAIGALEWGDKLIEQVVAAGLVREPLDLYKLTVKSIADLDR 494 Query: 465 IAKSKSAQLWHQFNLARKQPFTRWVMAMGIP----LTRAALNASDERSWSQLLFSTEQFW 520 + + + Q ++ A+GI T L ++ + +LL + E Sbjct: 495 RGEKSATKCLEQLKSRLPLALPVFLAALGIEGFAIQTARLLVSAGYTTIEKLLAAGEDEL 554 Query: 521 QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGFEP 560 +PG G+ +A ++ L A I P Sbjct: 555 AGIPGLGAIKAASIVRGLRARS--DEIGRLLAAGIVPVAP 592 >UniRef50_A6GI82 DNA ligase, NAD-dependent n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI82_9DELT Length = 706 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 114/574 (19%), Positives = 206/574 (35%), Gaps = 62/574 (10%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR-------------- 80 L I++ + +YW + D VYD+L L + Sbjct: 33 DTLAALIRRTNHEYWNLHAPTIPDPVYDRLVEGLRRLDPAHPVLDELGEATPEGPVIEAD 92 Query: 81 ----DVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRE-RSDLWVQPKVDGVAVTLVYR 135 L V H A + K L W + ++ V PK+DGVA +L Y Sbjct: 93 ATASIPPAERLGAPVRHTRAMLSLDKCYGPEDLYSWTEKFEGEVLVMPKMDGVACSLRYD 152 Query: 136 -DGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVS-----------GPLANSTLQGEIFL 183 +GKL A +RGNG +GED T V + VPQ + G ++GE+F+ Sbjct: 153 AEGKLFLAATRGNGSEGEDITVNVLEVEDVPQQLDPAAFAELPGPDGAAPAVEVRGELFM 212 Query: 184 QREGHIQQQMGGINARAKVAGLMMRQDDSDT-LNSLGVFVWAW-PDGPQLMSDRLKELAT 241 + + + N R AG + ++ T +L + + ++ L Sbjct: 213 KLSVFERYKEQYSNPRNLTAGAIKHKERGKTKAYTLSFYAYDLQGTELPTEREKFASLRA 272 Query: 242 AGFTLTQTYTRAVKNADEVARVRNEW--WK--AELPFVTDGVVVRAAKEPESR--HWLPG 295 GF + + E+ W + E+ + DGVV RA++ E R Sbjct: 273 LGFAVEECDFVPRG---ELQAAYERWSARRSADEIDYEIDGVVYRASEVAEQRRMGETGH 329 Query: 296 QAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQ 355 W +A+K+Q ++ + ++V ++G I+ VA P+ L + R + ++ + Sbjct: 330 HPRWSMAYKFQGDTGTTTLEEVLWSVSRTGTITPVAIFKPIELSGAMIARAGLFNLNHFD 389 Query: 356 EWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLT------------CY 403 E + G I V+ G IP ++ VV GAE P+ + Y Sbjct: 390 ELGLTAGAAIEVTRRGGVIPYVERVVTPGAEGETFDIPKRCPACNSEAVRRKKRDGEFLY 449 Query: 404 FASDV-CQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNT 462 + C + L +V+ + G G + L E L+ Sbjct: 450 CSKPEGCGSARLGELQHFA--KVVDIQGFGPKVVTQAVDAGLLSSPADFYTLRVEDLEEF 507 Query: 463 PGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQF 519 + + + L Q + R+ ++ ++GI A L A++ R+ + + + + Sbjct: 508 DRLGRRSAENLVAQVDAHRRIELPIFLQSLGIDHLGKQNAVLLANEFRTLAGVRGVSREA 567 Query: 520 WQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 ++ G A ++ E +L L Sbjct: 568 LLEVKGIKDAIADALLAGLETRA--ELIDALLEH 599 >UniRef50_D1XV29 NAD-dependent DNA ligase domain protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XV29_9BACT Length = 678 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 104/589 (17%), Positives = 204/589 (34%), Gaps = 65/589 (11%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-----SEPRD 81 + + L Q+ + D Y+ + D +D RL + G S Sbjct: 2 TEDKHKIMEALVLQLNEASDAYYNGKGEAMTDFEWDAAFDRLKALEEELGEVLPNSPTNS 61 Query: 82 VMMPPLNG-AVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLN 140 V L G H + K + L+ W ER +W+ K+DG+ + + Y +GKL Sbjct: 62 VSADKLKGQKEEHEYPALSLAKTKSETELAKWAEERP-IWLSWKLDGLTLVVTYDNGKLT 120 Query: 141 KAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ----MGGI 196 K ++RGNG G + T + I + TV + ++GE + Q Sbjct: 121 KVVTRGNGHIGTNITHLAAAIDNILPTVKAN-GHIVIRGEAVISYADFEQFNLESEEEYA 179 Query: 197 NARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDGPQ---LMSDRLKELATAGFTLTQTYTR 252 N R +G + +D ++ L ++ + DR+ L GF + Sbjct: 180 NPRNLASGSLTLKDINEVKARHLRWIPFSLVHTDEEIISWGDRMAFLDKLGFNTVERELI 239 Query: 253 AVKNADEVARVRNEW--------WKAELPFVTDGVVVRAAKEPESRHWLP---GQAEWLV 301 + A+ + +V W K + P+ DG+V+ + Sbjct: 240 TLPTAENIEKVIATWTLRVTDTTRKDKQPYPVDGLVITYDDTEYAATGSVTGHHATRAGF 299 Query: 302 AWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA- 360 A+K+Q + ++ I+++ + IS VA PV L+ V+R ++ ++ + I Sbjct: 300 AFKWQDESVETTLEYIEWSCA-TSTISPVAVFKPVELEGTTVKRASLCNISECERLGIGD 358 Query: 361 PGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENR-----------FNSLTCYFASDVC 409 G +++V A + IP++ V T PT + T + + C Sbjct: 359 AGTKLMVIKANKIIPKVISVTECLGSFTIPTTCPVCHQPTQIVESEASGTRTLHCTNHHC 418 Query: 410 QEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTPGIAK 467 + + + +K+ + +DG+ E + L E L+ G + Sbjct: 419 PAKQLKKFARFVSKEGINIDGLSEQTVQKFINLGWVSEYADLFHLQEKAEALKYMEGFGE 478 Query: 468 SKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERS--WSQLLFST--------- 516 L +RK + + A+ IPL + + +L+ + Sbjct: 479 KSCDNLLTAIEKSRKVEAKQLLFALSIPLVGKDVCTRLLSAYPLEELINKSRENMVSPTL 538 Query: 517 ------------EQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQ 553 E+ + + G G ++ + W ++ L + Sbjct: 539 QRSLFEEPRPNNEEIFSTIDGIGPEKSASFVGWMQDDSNYAQLQRLLQE 587 >UniRef50_C4ZCZ5 DNA ligase, NAD-dependent n=8 Tax=Bacteria RepID=C4ZCZ5_EUBR3 Length = 656 Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 93/577 (16%), Positives = 192/577 (33%), Gaps = 51/577 (8%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC-----FGSEP 79 + +++I L + + + Y+ + + +D + LTQ ++ S Sbjct: 1 MENNKIKDKIDELVESLNRASKAYYNGADEIMPNYEWDAMFDELTQLEKETGYIRHDSPT 60 Query: 80 RDVMMPPLNGAVM-HPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGK 138 ++ G H + K L W + +W+ K+DG+ + L Y G+ Sbjct: 61 QNAGYEAEAGNREPHEYPALSLAKTKSIEELKKWAGDMP-IWLSWKLDGLTLVLTYDGGR 119 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ------ 192 L K ++RGNG G + T IS P+ + + ++GE + Sbjct: 120 LVKILTRGNGTVGSNITFLQDAISGFPKEIPYK-GHMVVRGEATISYTDFKLLNDTIEDD 178 Query: 193 -MGGINARAKVAGLMMRQDDSDTLNSLGVFVWA-----WPDGPQLMSDRLKELATAGFTL 246 N R +G + DD + + V +A D DR+ L+ F + Sbjct: 179 DEKYANPRNLASGTLN-LDDVEEVKRRHVVFYAFTLVHIDDDIISWGDRMSYLSDMKFNV 237 Query: 247 TQTYTRAVKNADE-VARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLP---GQAEWLVA 302 + DE V R + + DG+V+ + A Sbjct: 238 VKREATDAAGLDEAVKRWTRDVESGRMDVPVDGLVICYDDTAYAAGGSVTGHHATRAGFA 297 Query: 303 WKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPG 362 +K+Q A ++ I+++ S IS VA PV ++ V R ++ ++ + + Sbjct: 298 FKWQDEAVDTRLRYIEWSCAVS-TISPVAVFEPVQIEGTTVSRASLCNLTEIERLGVGKE 356 Query: 363 DQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCY-----------FASDVCQE 411 + V A + IP+ V E P + + + C Sbjct: 357 CTLSVIKANKIIPKCIAVKDAVGEVEIPKECPVCHHPTRIFVSKNSGVKTLHCTNPDCTA 416 Query: 412 QFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL--TPEQLQNTPGIAKSK 469 + + + +K + +DG+ + L +++ + G + Sbjct: 417 KNVKKFSRFVSKSGMDIDGLSVQTMLKFINEGFIKQFPDIYHLPEHFDKISSMEGFGEKS 476 Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSW------SQLLFSTEQFWQQL 523 + +R + A+ IPL + ++ +T + + Sbjct: 477 CMNMQTAIEKSRHVHPVNLIFALCIPLIGTDAGKKIVNAIGFDGFADRMRNAT--DFVDI 534 Query: 524 PGTGSGRARQVIEWKENAQI----KKLGSWLAAQQIT 556 G G ++ ++EW N Q + L L +++ Sbjct: 535 DGIGQEKSGSILEWYANPQNSTMFEALIKELDIEKVD 571 >UniRef50_B8HIQ9 DNA ligase 2 n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=DNLJ2_ARTCA Length = 701 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 113/571 (19%), Positives = 224/571 (39%), Gaps = 52/571 (9%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA 90 +EE Y E+ D +D+L A++ + G EP + + Sbjct: 37 EEEYQAAVTTALSAAKAYETTDVEEMNDAEFDRLLAKIASHEAANGIEPEHDLHDTIGHG 96 Query: 91 ------VMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAIS 144 V H + K ++A+ + + ++PK+DG+A+++ Y +GK+ +A Sbjct: 97 GAGGGDVEHATPMKSLEKP-GEDAVIEFAAKHPKAVIEPKIDGLAISVRYENGKMVRAAR 155 Query: 145 RGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM--------GGI 196 RG+G GED T +V + +P+ + ++GE++L E + Sbjct: 156 RGDGYTGEDVTDRVRGVDGLPE--MAGDGDYEVRGELYLNDENKAKANAIRQAAGKAPFA 213 Query: 197 NARAKVAGLMMRQDDSDTLNSLGVFVWAW-PDGPQLMSDRLKELATAGFTLTQTYT-RAV 254 NAR VAG++ +QD S ++ D D +++L GFT ++ ++V Sbjct: 214 NARNGVAGMLNKQDGSY-AGLFSFAAYSTTIDEKADHLDSMQQLEGMGFTTARSLLPQSV 272 Query: 255 KNADEVARVRNE--WWKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQ 310 +A++ + L F+ DG V++ E +W VA+KY V + Sbjct: 273 LDAEDPMAAIAALGAERKGLNFLMDGAVLKVNTAAERAELGEGSRAPKWAVAYKYPAVEE 332 Query: 311 VAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLA 370 ++ I++ +GK+G++S+ A L PV +D V+ ++ +V Q D+ GD + A Sbjct: 333 PTVIEDIEYNIGKTGRLSIRARLTPVEVDGSVVEYASLHNVGHLQAADMRIGDTVSAYKA 392 Query: 371 GQGIPRID--DVVWRGAERTKPTPPENRFNSLT--------CYFASDVCQEQFISRLVWL 420 IP++ R PP + C R+ + Sbjct: 393 NDIIPQVHLPRADLRDESSQPWQPPSVCPQCSEPFDKSTELWRCHTPECS--VSGRISYA 450 Query: 421 GAKQV-LGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTP----------GIAKSK 469 ++ L ++G+G + AL + + + L +QL + + Sbjct: 451 ASRDAGLDIEGLGGSIGDALIEKDLVKDVSDLFYLGEDQLAEVELGETSTGGTRTLGQKN 510 Query: 470 SAQLWHQFNLARKQPFTRWVMAMGIPLTRA---ALNASDERSWSQLLFSTEQFWQQLPGT 526 +A++ + A+ QP R + A+ + T A++ + L +T + G Sbjct: 511 AAKIMAEIEKAKSQPLNRVITALSMRFTGRTFGRRLAAEFGTMEALQAATVSQLANVEGI 570 Query: 527 GSGRARQVIEWKENAQIKKLGSWLAAQQITG 557 G +A + E + + + + L + Sbjct: 571 GQKKAEVIHE--QLKKNAPVIAKLREAGVNM 599 >UniRef50_C2KQS7 DNA ligase (NAD(+)) n=2 Tax=Mobiluncus mulieris RepID=C2KQS7_9ACTO Length = 917 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 122/740 (16%), Positives = 211/740 (28%), Gaps = 213/740 (28%) Query: 27 PARAQEEISRLQQQIKQWDDDYWKEGKSE------VEDGVYDQLSARLTQWQRCFG---- 76 P + Q E L QI+ DY+ + + D YD L RL + + Sbjct: 8 PPQIQNEHQELVAQIEAARADYY--DNPDEHGVTRLSDADYDALFVRLQLLEGSYPALVT 65 Query: 77 --SEPRDV----------------------MMPPLNGAV-----------MHPVAHTGVR 101 S + V AV H + Sbjct: 66 PDSPTQTVGGGAGGGGGVKRAAAATTEAVGAAHVPENAVAVATTEGFPPHTHAKRMQSID 125 Query: 102 KMVDKNALSLWMRERSD--------LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGED 153 + + W + + KVDG+A++L Y DG+L +RG+G GED Sbjct: 126 DVFSTAEVDAWWERVEKGLEGKPFTVSAEVKVDGLAMSLTYVDGQLMTGATRGDGRVGED 185 Query: 154 WTQKVSLISAVPQTVSGP--LANSTLQGEIFLQREGHIQQQMG----------------- 194 T V I VPQT+ G ++GE++L E Q Sbjct: 186 VTANVRTIKTVPQTLGGTVIPHLVEIRGEVYLPLEDFAQMNAEREANNAAWEAARAAGDK 245 Query: 195 -----------GINARAKVAGLMMRQDDSDTL-NSLGVFVW------AWPDG---PQLMS 233 N R G + ++D + L WPDG Sbjct: 246 EKLKTLKKMPLFANPRNAATGSLKQKDSIEAAKRPLAFLAHGLGAVQGWPDGVSPMATQE 305 Query: 234 DRLKELATAGFT----LTQTYTRAVKNADEVARVR-----NEWWKAELPFVTDGVVVRAA 284 D ++L G Q+ + + +V + + DGVV++ Sbjct: 306 DFYRQLEVWGIPSVRRTPQSLGLRMAGLTTLTQVHAVLAAMTEHRHDFSHQIDGVVLKVD 365 Query: 285 KEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 W A+K+ P + I+ VG++G+++ A + V++D Sbjct: 366 NLAARVLLGSTARAPRWACAYKFPPEEVHTRLLGIEVQVGRTGRVTPFAVMERVLVDGSY 425 Query: 343 VQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAER--TKPTPPENRFNS- 399 V R + + + D+ PGD +++ AG IP + V + PE + Sbjct: 426 VSRATLHNAKEVARKDVRPGDTVVLRKAGDIIPEVLGPVLSLRPGGLPEWVMPEMCPSCG 485 Query: 400 ----------LTCYFAS-DVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH----- 443 + + C Q RL+ +GA+ L ++G+GE G AL Q Sbjct: 486 TRLGQEKEGDIDLRCPNQAGCPAQITERLIHVGARGALDIEGLGEEGALALTQPEAGRAD 545 Query: 444 ------------------------------------------RFEHIFSWLLLTPEQLQN 461 L + L++ Sbjct: 546 VAAALSAGGSCMLEDGTEIRVPAGKPLELGAIESLLPPTQEPVLRSEAGLFDLKSKDLRD 605 Query: 462 TPGIAKS--KSAQLWHQFN----------LARKQPFTRWVMAMGIPLTRAA--------L 501 + + + W Q A F +G P+ Sbjct: 606 VFVWREVPGTAGRDWQQVRFFWAKPKRVTAAEAATFGLVAGELGEPVAGKTVETFFNQLA 665 Query: 502 NASDERSWSQLLFSTE--------------------------QFWQQLPGTGSGRARQVI 535 A + +W L+ + + Q+ G G+ A V+ Sbjct: 666 AARSKETWRVLVALSIRHLGPVAARAVARRFPTLAAVAAADVEGLSQVEGVGAVIAASVV 725 Query: 536 EWKENAQIKKLGSWLAAQQI 555 +W +++ + Sbjct: 726 DWFRVPWHQEIVLAWTQAGL 745 >UniRef50_Q1ZXG5 BRCT domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q1ZXG5_DICDI Length = 843 Score = 446 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 107/648 (16%), Positives = 227/648 (35%), Gaps = 145/648 (22%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP--RDVMMPPLNG----- 89 L+ +I +++D Y+ + KSE+ D YD+L RL ++ F + V P + Sbjct: 71 LRNKINRYNDLYYNKSKSEISDFEYDKLFKRLEILEKKFNQQTITNQVGAPISDYSNNRG 130 Query: 90 -AVMHPVAHTGVRKMVDKNALSLWMRE------------------RSDLWVQPKVDGVAV 130 H ++ K+ + + + + + ++ K DG+ + Sbjct: 131 LKFRHKSRMLSLQNTYSKDDIIAFKNKIEKFLLKKQTSQQQQPQQQIEYSLELKYDGIGI 190 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKV-------SLISAVPQTVS-------GPLANST 176 +LVY + KL + ++RGNG GED T + +P ++ + Sbjct: 191 SLVYENNKLKRVLTRGNGEIGEDITTNALQFIPSLKNLLTLPSNLTVFILFLILKYKDFE 250 Query: 177 LQGEIFLQREGHIQQQM---------GGINARAKVAGLMMR---QDDSDTLN-------- 216 ++GE+ L + N R V+G++ + +D +D+LN Sbjct: 251 IRGEVVLNKSYLKIINKLKLDNNDQHQYKNTRNIVSGILRKSIEEDANDSLNIEPILLLN 310 Query: 217 ---SLGVFVWAWP--------------------------------DGPQLMSDRLKELAT 241 F + + + S LK Sbjct: 311 EQMKFDFFPYFFIPTNNNNNNINNGENENENDNEKENDNEMIIDDERCNTQSKNLKLFEK 370 Query: 242 AGFTLTQTYTRAVK----------NADEVARVRNEWW---KAELPFVTDGVVVRAAKEPE 288 GF + V + + EW + + DG+V++ Sbjct: 371 MGFQIDNGSNTVVTLSTGGGGNNNDIKNIEEFIKEWELKKRENHNWDIDGIVIKVNDINI 430 Query: 289 S--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRV 346 + W A+K+ ++++ +K I VGKSG+I+ VA + P+ + + R Sbjct: 431 QRILGDINRSPRWAFAYKFGAKSEISTIKDIVLQVGKSGRITPVALVEPIQVHGVTISRA 490 Query: 347 NIGSVRRWQEWDIAPGDQILVSLAGQGIPRID----------------------DVVWRG 384 + ++ + +I G ++L+ AG IP+I + +++ Sbjct: 491 TLNNLSYINKLNIKIGSKVLIERAGDVIPKIITNLDDNINNTNTNTNTNNTNNIESLFKC 550 Query: 385 AERTKPTPPENRFNS-------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 E P N + + + ++ C Q + ++ W K+ + + G+G++ + Sbjct: 551 NENGNILCPCNLKSELVNRVGYVDYFCVAENCPNQLVQQISWFVDKKAMNIQGVGKSQIQ 610 Query: 438 ALHQTHRFEHIFSWLLLT--PEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIP 495 L + E L E+L + G + +K L ++ + + A+GIP Sbjct: 611 VLLENQLIEDFGDLYELYQFKEKLLSLKGFSHTKVNNLLESIEDSKSRGLASLLCAIGIP 670 Query: 496 LTR---AALNASDERSWSQLLFS-TEQFWQQLPGTGSGRARQVIEWKE 539 + + + +S L+ S + + + G G + + + Sbjct: 671 GIGSSNSKILSEKFQSLDNLINSPSIESIELQSGLGRQTSESIFNFFN 718 >UniRef50_B2PUQ1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PUQ1_PROST Length = 570 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 190/538 (35%), Positives = 304/538 (56%), Gaps = 20/538 (3%) Query: 21 VCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRC--FGSE 78 C S ++E +L +Q++QW+ Y G S V D YDQL QWQ+C + Sbjct: 40 QCSTLSQDELKKESQKLGEQLQQWNRLYRLSGNSPVTDETYDQLLNTWQQWQKCQNLSGQ 99 Query: 79 PRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGK 138 + +PP + V HP+ HTG++K+ ++ + W+ R ++W+QPKVDGVA++LVY+ GK Sbjct: 100 LPPIHLPPHSRTVKHPIVHTGLKKL-NEVDIGKWIDTREEVWLQPKVDGVAISLVYQQGK 158 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINA 198 L ISRGNG++G +W K I A+P+ + LQGE+F + + H QQ GG+NA Sbjct: 159 LVSMISRGNGIEGLEWRDKADFIPAIPKQLPTSQPQLILQGELFWRLKDHRQQASGGVNA 218 Query: 199 RAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNA 257 R +VAG +MR+ T ++ VF+WAWP+G ++ ++LA GF LTQ Y+ V Sbjct: 219 RNQVAGWLMRKSKPVTPEANIDVFIWAWPEGVGKAEEQWRQLANLGFPLTQQYSHKVTTM 278 Query: 258 DEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAI 317 +V + ++ +++ +PF TDG+V+++ P W W VAWK+ ++V + Sbjct: 279 AQVKKWQSYYYQQPMPFATDGIVLKSFPTPRVAAWQVNHNSWSVAWKHPYTRIASKVTDL 338 Query: 318 QFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 F VG++G +SVVA + PV LD KKV R+ +GS++ WQ+ D+ GD I V+LAG GIP++ Sbjct: 339 HFRVGRTGAVSVVAEIEPVELDSKKVSRLYLGSLKSWQKKDLLVGDTIQVALAGHGIPKL 398 Query: 378 DDVVWRGAERTKPTPPENR-FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 + V+WR +RT P + + F++L+C+ + C++QF++RL WLG + L + GI EA W Sbjct: 399 ESVIWRLQQRTYPDLSQFKQFHALSCFVMTPQCEQQFVARLNWLG--KQLKIKGISEATW 456 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 R + + + +W L+P + P K+ ++ QF L +QP W+ +GIPL Sbjct: 457 REWAEHYHLNKLTTW--LSPSWQTSLPNT--KKTKKIIEQFRLVGQQPLMNWLKGLGIPL 512 Query: 497 TRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRAR--QVIEWKENAQIKKLGSWLAA 552 L+ E S LL +T L G G + ++ +W IK++ + Sbjct: 513 KDKHLSLITELS---LLDNT----LFLEGLGLSIIQKTKLNQWLSTPDIKEIFQVIDE 563 >UniRef50_B2S3M4 DNA ligase n=3 Tax=Treponema RepID=DNLJ_TREPS Length = 823 Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats. Identities = 109/558 (19%), Positives = 211/558 (37%), Gaps = 47/558 (8%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR-DVMMPPLN 88 AQ + L++ I D Y+ +S++ D +D L L + Sbjct: 4 AQRRVQELEKLILHHQDRYYN-AESDISDDAFDALWEELARLDPGNPLLKAIGSDSQRDA 62 Query: 89 GAVMHPVAHTGVRKMVDKNALSLWMRER--SDLWVQPKVDGVAVTLVYRDGKLNKAISRG 146 H V K D+ + S W ++ VQ K+DGV++ L Y G A++RG Sbjct: 63 VKKRHIVPMGSQHKAADEESFSAWAKKNALQAFLVQHKLDGVSLELQYERGHFCCALTRG 122 Query: 147 NGLKGEDWTQKVSLISAVPQTVS---GPLANST----LQGEIFLQREGHIQQQMGGINAR 199 NG+ G+D T V + T++ GP N ++GE+ + ++ H N R Sbjct: 123 NGIVGDDVTANVRGMRGFVPTLTAEWGPCGNLPFTGGVRGEVIMHKDIHRSHYPTHANCR 182 Query: 200 AKVAGLMMRQDDSDTLNSLGVFVWAWPDG-----------PQLMSDRLKELATAGFTLTQ 248 V G++ R+D L + + G +++L LA GF Sbjct: 183 NTVNGILKRKDGRGRT-HLHIVCYDAVPGTPGKPFTGSLPFADETEKLAWLARQGFVTV- 240 Query: 249 TYTRAVKNADEVARVRNEWWKAE--LPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQ 306 ++ NA EV +R+E + LP+ DG+VV++ LP + +A+K+ Sbjct: 241 -HSHRCANAQEVVALRSEIMRTRELLPYSIDGLVVKSTDLDFQDAQLPR-PKKQIAFKFS 298 Query: 307 PVAQVAEVKAIQFAVGKSGK-ISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQI 365 + ++ +Q+ SG + + PV L V+R N+ + + + G + Sbjct: 299 TQEAITTLRDVQWQT--SGVTYTPIGITDPVRLAGTTVKRANLCNPNMLTKLCLKIGSHV 356 Query: 366 LVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS--------LTCYFASDVCQEQFISRL 417 L+S G+ IP+I+ +V A + P + + + C R+ Sbjct: 357 LISKRGEIIPKIEALVSTPAHAQEIHIPTQCTSCNTVLENSGSRLFCPNVNCPLLSHHRI 416 Query: 418 VWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQF 477 + L + +G + L + + I LT E L + + + ++ Sbjct: 417 TRWI--ECLEIKHVGTELIQRLFEEKKVRRIPDLYTLTCEDLIEIEHVGNATAKKILEAI 474 Query: 478 NLARKQPFTRWVMAMGIPLT----RAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQ 533 + ++ ++ GI L + + ++L +T + + + G+ A+ Sbjct: 475 HHKKEIALQTFIAGFGIEGIGETMGEKLICAGFDTLEKVLHATTETLESIYQFGTELAKS 534 Query: 534 VIEWKE--NAQIKKLGSW 549 V+ + +L Sbjct: 535 VVTGIARVKDDMCELLDR 552 Score = 45.6 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 5/78 (6%) Query: 485 FTRWVMAMGIPLTRAALNASDERS-----WSQLLFSTEQFWQQLPGTGSGRARQVIEWKE 539 TRW+ + I L L T + ++ G+ A++++E Sbjct: 416 ITRWIECLEIKHVGTELIQRLFEEKKVRRIPDLYTLTCEDLIEIEHVGNATAKKILEAIH 475 Query: 540 NAQIKKLGSWLAAQQITG 557 + + L +++A I G Sbjct: 476 HKKEIALQTFIAGFGIEG 493 >UniRef50_Q73MH0 DNA ligase n=1 Tax=Treponema denticola RepID=DNLJ_TREDE Length = 645 Score = 440 bits (1133), Expect = e-122, Method: Composition-based stats. Identities = 98/546 (17%), Positives = 207/546 (37%), Gaps = 46/546 (8%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLN-G 89 ++ I L++ IK+ D Y+ + E+ D +D L L + Sbjct: 4 EKRILDLEKTIKKHQDLYYN-AQPEISDAEFDALWDELKALDPQNKLFFTVPLESTEGFA 62 Query: 90 AVMHPVAHTGVRKMVDKNALSLWMRERS--DLWVQPKVDGVAVTLVYRDGKLNKAISRGN 147 H + K D + W + + VQ K+DG ++ L Y +G +A++RG+ Sbjct: 63 KSEHIIPMGSQEKAADPPSFEAWALKMPFKEYIVQYKMDGASLELQYEEGHFVRAVTRGD 122 Query: 148 GLKGEDWTQKVSLISAVPQTVSGPLANST--------LQGEIFLQREGHIQQQMGGINAR 199 G G+D T+ V + + + ++ + ++ E+ + R H + N R Sbjct: 123 GKIGDDITENVLKMKGLIKDITVNAGPAYGTKPFSGGIRCEVIMLRSIHQKYFKDKANCR 182 Query: 200 AKVAGLMMRQDDSDTLNSLGVFVWAWPDG-----------PQLMSDRLKELATAGFTLTQ 248 GLM ++ + + L +F + G + S++L L AGF + Sbjct: 183 NAANGLMKKK-NGELCEHLNLFAYDAVQGSIGRPFTGDAPFKTESEKLVWLKKAGFNCVE 241 Query: 249 TYTRAVKNADEVARVRNEW--WKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQ 306 + K+ EV R + L + DG+V++ + + E +A+K+ Sbjct: 242 --VKYCKSIAEVIEYRAHVMDIRPSLDYDIDGLVIK-NDTIDPEDMKRARPEKQIAFKFS 298 Query: 307 PVAQVAEVKAIQFAVGKSGK-ISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQI 365 V +K I+++ SG + +A + PV L V+R ++ + + ++ G ++ Sbjct: 299 LEEAVTVLKEIEWSE--SGATYTPIALIEPVRLAGTTVKRASLANPNIIKALNLKIGSRV 356 Query: 366 LVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNS--------LTCYFASDVCQEQFISRL 417 +V+ G+ IP+I+ + + P+ Y + C + R+ Sbjct: 357 VVTKRGEIIPKIEALAENPPNVKEIEYPDTCSVCGSPLTNEGTRLYCPNMSCPKLIHHRI 416 Query: 418 VWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQF 477 + VL + G + L + R I LT E+L + K + +++ Sbjct: 417 EKWIS--VLDIRDFGITLIKRLFEMGRVNSITDLYTLTVEELAAIDRMGKLSAEKVYKAL 474 Query: 478 NLARKQPFTRWVMAMGIPLTR----AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQ 533 + ++ T ++ I L + ++LL ++E + + G + Sbjct: 475 HSKKEISLTEFIAGFDIEGIGETMVEKLEEAGFNDLNELLGASEADFANVYQFGQVLSHT 534 Query: 534 VIEWKE 539 ++ Sbjct: 535 LVTNLS 540 >UniRef50_B6XH23 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XH23_9ENTR Length = 564 Score = 440 bits (1131), Expect = e-122, Method: Composition-based stats. Identities = 188/556 (33%), Positives = 299/556 (53%), Gaps = 19/556 (3%) Query: 6 AILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLS 65 A+ I +C E RL +Q+++WD Y EG SEV D VYDQ+ Sbjct: 22 AVSIAYGTEFVDSQKICHTLDDKLMGAEQLRLGEQLQEWDRQYQIEGVSEVSDEVYDQIL 81 Query: 66 ARLTQWQRCF--GSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQP 123 A+ + QRC + P V HP+ HTG++K+ + ++ W+ R ++W+QP Sbjct: 82 AQWRRGQRCLNLPDRLPQPVQPNTERLVKHPIPHTGLKKL-EFKEIAPWLESRHEVWLQP 140 Query: 124 KVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFL 183 KVDGVAVTL Y +G L ISRG+G KG +W +K I +P+T+S + LQGE+F Sbjct: 141 KVDGVAVTLHYENGHLVSMISRGDGSKGLNWREKADFIQGIPKTISIKQS-IVLQGELFW 199 Query: 184 QREGHIQQQMGGINARAKVAGLMMRQD-DSDTLNSLGVFVWAWPDGPQLMSDRLKELATA 242 + H+Q+ GG NAR+KVAG +MR+D + + +GVF+W+WPD MS +L ELA Sbjct: 200 KLNEHVQKIDGGQNARSKVAGWLMRKDMPAQVTDDIGVFIWSWPDNSTPMSQQLSELAML 259 Query: 243 GFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVA 302 GF L Q Y+ + + +A+ R+ ++ +PF TDGVV+++ P S W Q W +A Sbjct: 260 GFDLAQRYSHPIVESQSIAQWRDHYYSISMPFATDGVVLKSFPTPSSSAWRANQNSWSIA 319 Query: 303 WKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPG 362 WKY + V++V + F VG+SG ++V+A++ PV +DDKKV ++ +GS+ W++ D+ G Sbjct: 320 WKYPLKSIVSDVVDLTFRVGRSGVVNVIANIEPVRIDDKKVSKIRLGSLNSWKQKDVLVG 379 Query: 363 DQILVSLAGQGIPRIDDVVWRGAERTKP-TPPENRFNSLTCYFASDVCQEQFISRLVWLG 421 D+I ++L+G G P ++ V+WR R T P F++L+C S C QF++RL WLG Sbjct: 380 DKIQLTLSGHGAPLMEKVIWRQKPRQYLNTLPLENFHALSCLSYSTDCASQFVARLTWLG 439 Query: 422 AKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLAR 481 + L + G+GE W + + + W L+P+ P + +A Q A+ Sbjct: 440 --KQLNIRGVGEKTWMVWVEKYGLSELLGW--LSPDWQNRLPKTQQ--TANALEQLQQAQ 493 Query: 482 KQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTE-QFWQQLPGTGSGRARQVIEWKEN 540 Q W+ +GIPL L + + +E + +++ R + + +W Sbjct: 494 HQLTANWLKGLGIPLKSEQLEK-----IAAITTLSEPEQIEKMA-VSETRKQALQQWLAA 547 Query: 541 AQIKKLGSWLAAQQIT 556 +IK+ L I+ Sbjct: 548 PEIKQALQTLQNLGIS 563 >UniRef50_D2U3F9 NAD-dependent DNA ligase LigB n=1 Tax=Arsenophonus nasoniae RepID=D2U3F9_9ENTR Length = 547 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 180/543 (33%), Positives = 290/543 (53%), Gaps = 41/543 (7%) Query: 21 VCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP- 79 CP W EI + ++K+WD+ Y+ G+S V D YDQ+ A W C P Sbjct: 37 QCPDWPKLVLHREIKAINSELKRWDEAYYINGQSLVNDETYDQIFALWKHWSNCLRLPPD 96 Query: 80 -RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGK 138 + + P+ G HPV HTG++K+ + ++ W+ R ++W+QPKVDGVA TLVY+ GK Sbjct: 97 KTNTLSLPIKGRKTHPVIHTGLKKI-TADEIARWIAGRHEVWLQPKVDGVAATLVYKKGK 155 Query: 139 LNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINA 198 L ISRGNG++G DWT K + A+P+T+ LQGE+F + GH Q GG NA Sbjct: 156 LAALISRGNGIEGIDWTPKADFLPAIPKTIPNHATQLILQGELFWYQTGHQQAIAGGANA 215 Query: 199 RAKVAGLMMRQDD-SDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNA 257 R KVAG +MR++ +G+F+W+WPDGP M + +L GF LT+ Y+ V + Sbjct: 216 RNKVAGWLMRKNLLVQQEEQIGIFIWSWPDGPSNMQTQFAQLERWGFPLTKRYSHLVTSV 275 Query: 258 DEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAI 317 D++ + + ++ +PF TDG+V++ ++W G W VAWKY +VA+V A+ Sbjct: 276 DQITQWQRYYYNQPMPFATDGIVLKQLPYTLGQYWQAGINNWSVAWKYPTQNRVAQVAAV 335 Query: 318 QFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 +F +G++GKI+ + I PGD I +SL+G GIP+ Sbjct: 336 KFNIGRTGKINPII--------------------------GILPGDAIQISLSGHGIPKF 369 Query: 378 DDVVWRGAERTKPTPPENR-FNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGW 436 D +VW+ +R + PE + ++ L+C++ S C+ QF++RLVWL + L ++GI E GW Sbjct: 370 DKIVWQIKQRKMLSVPEQKNYHQLSCFYYSMRCESQFVARLVWLA--KQLKMEGINEKGW 427 Query: 437 RALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPL 496 AL + + ++ W LT EQ+ +K ++ QF A+K+PF+ W+ +G+PL Sbjct: 428 LALIRAGKITNLMDWSRLTLEQITEVAMFKANKGKFIYQQFLSAQKRPFSEWLKGLGVPL 487 Query: 497 TRAALNASDERSWSQLLFSTEQFW-QQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQI 555 + + + + + ++++++ EN +K+L L +I Sbjct: 488 P-----EKLFSKINCWNDLSSKEINSAI--LSRKQQKKLVQFIENKDVKQLVKVLGQHKI 540 Query: 556 TGF 558 GF Sbjct: 541 NGF 543 >UniRef50_D1P0P2 NAD-dependent DNA ligase adenylation domain protein n=2 Tax=Providencia RepID=D1P0P2_9ENTR Length = 557 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 184/559 (32%), Positives = 303/559 (54%), Gaps = 20/559 (3%) Query: 1 MKVWMAILIGILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV 60 M + + + C + + + RL Q+++W+ +Y +G S + D V Sbjct: 1 MLLQVVTSLAYGMEYHQAKDNCDSPNQNILINDHQRLGNQLQEWNKNYLVDGFSPINDEV 60 Query: 61 YDQLSARLTQWQRCFGSEP--RDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD 118 YDQL ++ Q QRC V +P L V HP+ HTG++K + N ++ W+ +R + Sbjct: 61 YDQLLSKWQQRQRCLSLSDSLPQVPLPILTPLVKHPLPHTGLKK-QNLNEITTWIAKRKE 119 Query: 119 LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ 178 +W+QPKVDGVAV+LVY +G+L ISRGNG++G +W +K I +P+ + LQ Sbjct: 120 IWLQPKVDGVAVSLVYDNGQLVSLISRGNGVEGLEWRKKADFILDLPKVIPIKQRVI-LQ 178 Query: 179 GEIFLQREGHIQQQMGGINARAKVAGLMMRQ-DDSDTLNSLGVFVWAWPDGPQLMSDRLK 237 GE+F + H+Q+Q+GG+NAR+KVAG +MR+ +++G+F+WAWPDG +L Sbjct: 179 GELFWKLNNHVQKQLGGLNARSKVAGWLMRKKLPEKIEDNIGIFIWAWPDGDLQQEVQLS 238 Query: 238 ELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQA 297 L+ GF L++ Y+ V + +++ + + +++ LPF TDG+V+++ P S W Q Sbjct: 239 RLSEIGFDLSKRYSHQVTSIEQIIQRQEDYFSTPLPFATDGIVLKSFPTPPSAAWQSNQN 298 Query: 298 EWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEW 357 W +AWKY ++E+ ++F VG++G ++VVAS+ PV LD K+V VN+GS+ W++ Sbjct: 299 SWAIAWKYPLQNIISEITGLKFGVGRTGIVNVVASIKPVTLDAKQVSHVNLGSLNSWKKK 358 Query: 358 DIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP-TPPENRFNSLTCYFASDVCQEQFISR 416 D+ GD I ++LAG GIP+++ V+WR A R P T +FN +C+ S C QF++R Sbjct: 359 DLLVGDHIQLTLAGHGIPKVEQVIWRVAHRDYPETMLLEQFNRWSCFSYSIECLPQFVAR 418 Query: 417 LVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQ 476 L WLG + LG+ G+GE W+ + + + W L+P P + + Q Sbjct: 419 LTWLG--KQLGIKGVGEKTWQQWAENYGLSQLLEW--LSPSWQGQLPKT--KTNLKHLEQ 472 Query: 477 FNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIE 536 QP W+ + IPL+ + + S L T + +L R +Q Sbjct: 473 LQKVADQPLAVWLKGLDIPLSNTEI--KKIDTISMLYEPTIIKYLKLSD---KREQQFKH 527 Query: 537 WKENAQIK---KLGSWLAA 552 W E +IK ++ + Sbjct: 528 WIEVTEIKLALQIIQEIKK 546 >UniRef50_D1NBA4 DNA ligase (NAD(+)) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NBA4_9BACT Length = 626 Score = 419 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 113/547 (20%), Positives = 203/547 (37%), Gaps = 63/547 (11%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPL--NGAVM 92 L + I+ + YW EG+ E+ D YD+L L + + V P + +G V Sbjct: 14 DELIRLIEYHNRRYWDEGEPEIPDARYDELIRALQKLEPDHELVT-RVYAPAVAGSGKVR 72 Query: 93 HPVAHTGVRKMVDKNALSLWMR-----ERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGN 147 H + K + W + E +L V+PK DG++ DG++ +RG+ Sbjct: 73 HLRPMLSLDKAYSLEEVLEWAKKFARSEDEELLVEPKYDGISANF---DGRV--LSTRGD 127 Query: 148 GLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG--------GINAR 199 G GE+ T K+ L+ +G + ++GE+ ++ + N+R Sbjct: 128 GELGENITDKLPLVELETAGHTGKVDR-PVRGELVIRDDDFKTLYSHIRKKGGGVYKNSR 186 Query: 200 AKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQ-TYTRAVKNAD 258 VAG+M ++ ++ EL A TL Sbjct: 187 NAVAGIMGLKEIAE-----------------------MELQGAKITLVDYNLVSFRVKYS 223 Query: 259 EVARVRNEWWK--AELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEV 314 E+A E + LP+ DG+V++ A S +A+K+ + + + Sbjct: 224 ELAAKWEELRRQLEALPYPQDGIVIKLADSAYSASLGNTAHHPRGEIAFKFTNIRRETRL 283 Query: 315 KAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGI 374 ++++ GK+ ++ VA L PV + ++R + +++ E + GD + V AG I Sbjct: 284 IGVEWSFGKNC-LTPVAELEPVEISGTTIRRATLHNIQNILELGVQIGDTVTVERAGDVI 342 Query: 375 PRIDDVV--WRGAERTKPTPPENRFNSLTC----YFASDVCQEQFISRLVWLGAKQVLGL 428 P I P + + C E + RL A + LG+ Sbjct: 343 PYIVSSTPGEERRSPLIEDCPSCGAKLVRRGPELCCPNPECPETQLQRLA--AAVRNLGI 400 Query: 429 DGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRW 488 + +GE R L + H+ LT L G A +A L + AR + Sbjct: 401 ERLGEPTLRKLMENSGVRHLGDLFELTAMDLLRLDGFAAKSAANLIEEIQKARIVNDYQL 460 Query: 489 VMAMGIPLTRAALNASDER--SWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKL 546 + A+ IP A + ++ L +E+ +PG G RA+ ++ + Sbjct: 461 LAALNIPNIGANVAKVIFSHTDFAGLRRMSEEELSAIPGIGPERAKALVSELAAQS--EY 518 Query: 547 GSWLAAQ 553 L Sbjct: 519 LDELLGA 525 >UniRef50_Q2Z0V9 Putative NAD-dependent DNA ligase n=1 Tax=Pseudomonas phage EL RepID=Q2Z0V9_9CAUD Length = 656 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 106/594 (17%), Positives = 198/594 (33%), Gaps = 80/594 (13%) Query: 25 WSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS------- 77 E I L +Q+ Y+ E ++E+ D YD L L + + Sbjct: 1 MGKHSPVERIKYLHEQLTYHAHLYFVENRNEISDEAYDVLEQELNELYDRYPEIAAKFDF 60 Query: 78 ----EPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD---LWVQPKVDGVAV 130 P V ++K + ++ + D + + K+DG+A+ Sbjct: 61 YNRPVPIHEPSGETIQPVRFEEPMLSLKKALSVEEADTFLLKFPDGTNFFYEEKLDGLAL 120 Query: 131 TLVYRDGKLNKAISRGNGLKGEDWTQKV---------SLISAVPQTVSGPLANSTLQGEI 181 LVY G+L +RG+GL GED T + + +P ++GE Sbjct: 121 ELVYEQGQLVSMSTRGSGLVGEDVTHSIVLFDEATLPRTLRTLPDRHKPQGDRLVIRGEG 180 Query: 182 FLQREGHIQQQMGG---INARAKVAGLMM---RQDDSDTLNSLGVFVWAWPD--GPQLMS 233 ++ E G N R V+G + + D +L + D G + S Sbjct: 181 YISLERFDSLNETGGKRSNPRNAVSGWVRSLPQNQREDIRGTLYFAAYYASDRLGTKAYS 240 Query: 234 DRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESR--H 291 + + L GF + ++ + E + + DG+V++ K E Sbjct: 241 ELRQVLLGLGFGVPESRDWIAVS---------ENRRGNIR-PVDGIVIKVDKFKEQDASG 290 Query: 292 WLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSV 351 W +A+K+ +A+V+ + + G++ V PV + Q ++ + Sbjct: 291 NGSKFPHWAIAYKFPAEEALAQVEGCIWNTSRFGRVVPVVQYTPVTIQGVICQSASLDNY 350 Query: 352 RRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC--------- 402 + + ++ GD+I+++ IPR++ V E P + + + Sbjct: 351 GSFMDLGLSIGDRIVITRNNDVIPRLNRV-EECGEGDLLEAPTSCPSCDSLLEVVVGRDS 409 Query: 403 ----YFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLL---- 454 C Q + R V K L +DG+G L + + L L Sbjct: 410 SELVCNNVAECPAQIVMRCVTTFDKFGLDVDGLGPVKVSELVEKGWVKQPADILTLPEGI 469 Query: 455 TPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSW----- 509 + L T ++ + P R++ A+GIP L + Sbjct: 470 KDQCLTPTTRRGL---ERVLQE-----PVPLHRFLKALGIPDIGITLAKRLANAIPEGKI 521 Query: 510 -SQLLFSTEQFWQQLPGTGSGRARQVIEWKENA---QIKKLGSWLAAQQITGFE 559 L Q + G G A +V+ ++ L Q TG + Sbjct: 522 EESLTNPKF--LQSVRGVSVGIAYRVVNAFDSPVFKDNFHALKGLLTLQYTGTQ 573 >UniRef50_B7GA45 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GA45_PHATR Length = 864 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 114/679 (16%), Positives = 209/679 (30%), Gaps = 158/679 (23%) Query: 30 AQEEISRLQQQIKQWDDDYWKEGK---------SEVEDG------VYDQLSARLTQWQRC 74 EE+ RL +++ D Y++ D Y Sbjct: 102 IYEELVRLASDLRRHDALYYESEMARNSVGRIPPCSNDSNVRVAWAYKP--RGTEDASET 159 Query: 75 FGSEPRDVMMPPLNGAV------MHPVAHTGVRKMVDKNALSLWMRERSD---------- 118 F PR V H + + + L W+ Sbjct: 160 FFCRPRRPTPNDATRIVVDRVKRPHVRPMLSLDNVHREEELLAWLERIRKKLTVDDGPSS 219 Query: 119 --LWVQPKVDGVAVTLVYRDGK-------LNKAISRGNGLKGEDWTQKVSLISAVPQTVS 169 + +PK+DG++++ Y + A +RG+G +G+D T V + VP T+ Sbjct: 220 LTILTEPKLDGLSLSCRYEQRQSNTTLYTFVWASTRGDGKQGQDVTHAVQQGNLVPLTLD 279 Query: 170 -----------GPLANSTLQGEIFLQREGHIQQQMG---GINARAKVAGLMMRQDD---- 211 ++GEI L + NAR +G+++R++ Sbjct: 280 WASLVADPESYTHPKVLEIRGEIVLPTTVFQSLEGEGLAFANARNAASGILLRKESITDP 339 Query: 212 --SDTLN-SLGVFVWAWP--DGPQLMSDRLKE-LATAGFTLTQ-----------TYTRAV 254 S L L + + DG + +L+ L T GF + + T V Sbjct: 340 VASQALREKLCFYAYDVAGDDGFTVSGVQLRRVLPTLGFRVPEPVAVTRLRLNNTTAWNV 399 Query: 255 KNADEVARVRNEWWKAEL---------PFVTDGVVVRAAKEPES--RHWLPGQAEWLVAW 303 + + + + + DG V + ++ W +A Sbjct: 400 NDIQALLKYHHSMQHHRQGKKTSQTYGDYDMDGAVHKVSESDLRIILGQSNRAPRWAIAH 459 Query: 304 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQE-WD---- 358 K+ P+A V + I VG++G ++ VA L PV L V+R + + Q+ Sbjct: 460 KFAPLAAVTTLLDITVQVGRTGALTPVAILQPVELAGVVVRRATLHNFAHMQQVLGSTTT 519 Query: 359 IAPGDQILVSLAGQGIPRIDDVV-------WRGAERTKPTPPENRFNS------------ 399 IA +LV AG IP++ + G + PE Sbjct: 520 IAKESSVLVRRAGDVIPQVVQRIAGTDAGSNNGFDTISVAFPETCPACGSPVVTDEVNKT 579 Query: 400 ---------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFS 450 L C C + + + ++ L + G+ EA L + Sbjct: 580 ASKETAGQVLRCGGPQWNCTPRAVGSIAHAVSRDALDVTGLSEARIMQLIEAGFISRPSD 639 Query: 451 WLLLTP-----EQLQNTPGIAKSKSAQLWHQFNL-ARK-QPFTRWVMAMGIPLTR---AA 500 L E+L G + L N A+ +R+V ++GI + +A Sbjct: 640 IFALAKSPTQLEKLAEMDGWGPKSAQNLAAVANRIAKNGISLSRFVYSLGIRFSGVHSSA 699 Query: 501 LNASDERSWSQLLF----STEQFWQQL-----------------------PGTGSGRARQ 533 L A+ S L ++ +Q+ G G Sbjct: 700 LIAAAYGSVEDFLKDVEAASTLPIKQVQDQESNDEQVQSFARLREETDITKGIGPVLLNS 759 Query: 534 VIEWKENAQIKKLGSWLAA 552 + + ++ ++ + LA+ Sbjct: 760 LDTFAQDQELVEAAESLAS 778 >UniRef50_B7J8R2 DNA ligase, NAD-dependent, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J8R2_ACIF2 Length = 609 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 93/549 (16%), Positives = 178/549 (32%), Gaps = 69/549 (12%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-SEPRDVMMPPLNG--AVMH 93 L ++++ + Y + G + D YD L RL + Q + + + G V H Sbjct: 3 LVHKLEEANAAY-RAGAPIMSDAEYDALVERLRREQPDHPYLQTVEPEPENIFGGAKVRH 61 Query: 94 PVAHTGVRKMVDKNALSLWMRERSD-----------LWVQPKVDGVAVTLVYRDGKLNKA 142 K ++ L + + + K+DG+A + G Sbjct: 62 HAPMLSTEKAYTESDLIRYFSAVTRQAARLGMDEVIYAMTAKLDGLAGSRDRAHG--VDL 119 Query: 143 ISRGNGLKGEDW-TQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ--QMGGINAR 199 +RGNGL+GED + V V GP GEI + ++ + +G + R Sbjct: 120 ATRGNGLQGEDIGKAFARGLKIVGADVDGP-------GEIVMPKDFFEEHLVPLGFKHPR 172 Query: 200 AKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADE 259 + G + D + +KE A F R + D Sbjct: 173 NFMVG------------------FVGADTEKDHHRLVKESGMAHFVPYANLPRFYADKDT 214 Query: 260 V---ARVRNEWWKAELPFVTDGVVVRAAK--EPESRHWLPGQAEWLVAWKYQPVAQVAEV 314 + +E + P+ TDG+V+ + + W +A+K + V Sbjct: 215 ILRDIAYISEDIRKNTPYDTDGIVIEVEEPELRAALGSTNHHHRWQIAYKTKGETAETTV 274 Query: 315 KAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGI 374 + + G++G+I+ V + PV L ++R + ++ ++ + G ++ + +G+ I Sbjct: 275 TGVVWQTGRTGRITPVIEIDPVELSGATIRRATAHNFQKARKDGLGVGSRVTMIRSGEVI 334 Query: 375 PRIDDVVWRGAERTKPTPPENRF----NSLTCYFASDVCQEQFISRLVWLGAKQVLG-LD 429 P I DV+ P + + C+ Q + +++G D Sbjct: 335 PFIMDVLSPAPLDVPTACPCCNGPVEEDGEYLTCVNPHCEAQAEGAISHFF--KIMGTAD 392 Query: 430 GIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPF--TR 487 G G + I + L +T + G ++ L + P R Sbjct: 393 GFGPKAVEKIVAAG-ITDILAVLDMTRADFEGM-GFGPGQAENLEREMKRCMSTPVEDWR 450 Query: 488 WVMAMGIPLTRA---ALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIE-----WKE 539 ++ A GI L T + G A + W E Sbjct: 451 FLAAFGIRYLGRGDSKALLCAIGGLDALNGITPAQIMAIDGFAEKTALCIAHDLTWRWME 510 Query: 540 NAQIKKLGS 548 ++ Sbjct: 511 IEAVRDRME 519 >UniRef50_A1SX61 DNA ligase n=6 Tax=Proteobacteria RepID=DNLJ_PSYIN Length = 649 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 97/540 (17%), Positives = 178/540 (32%), Gaps = 57/540 (10%) Query: 46 DDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-SEPRDVMMPPLNGAVMHPVAHTGVRKMV 104 + +++ + + D YD + + + + + + V P K Sbjct: 50 NAFYRSAEQIINDSTYDAFLSEFSTYNPDHPYLLTVEPEVLADSKTVPLPKKMLSTDKAY 109 Query: 105 DKNALSLWM-------------RERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKG 151 + W+ + V PK+DG A Y DG +RG+G +G Sbjct: 110 SFEEIKKWIDRLLKAAIEVGVSESEIQIKVTPKLDGYAA---YDDG--ISLYTRGDGARG 164 Query: 152 EDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ-QQMGGINARAKVAGLMMRQD 210 +D T+ + V L GEI +++ N+R A ++ + Sbjct: 165 QDITRAFNKGLQVANNGDRGLGP----GEIVIKKSYFDTVLSDKFENSRNIQAAIIAEKK 220 Query: 211 DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKA 270 +++ A G + L L YT + + + + E + Sbjct: 221 VDESIQK------AIDVGACVFFPFLS-LENW----IGHYTEILVDFESIV----EKMWS 265 Query: 271 ELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKIS 328 + + DGVV+ E W +A+K + +V + ++G+++ Sbjct: 266 AVDYDIDGVVLEVTNETLKEHMGATRHHHRWQIAFKVNAESAEVKVLNVTPQTSRTGRVT 325 Query: 329 VVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERT 388 VA L P L + R + + + PG + + +G IP+I+ V+ + Sbjct: 326 PVAELEPTKLSGATISRATVHHYNMVKTNGVGPGAIVQLVRSGLVIPKIEKVIKAVEPQL 385 Query: 389 KPTPPENRFN------SLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQT 442 P + L C +D C Q + LV K + DG G LH+ Sbjct: 386 AKECPSCGTHLIWESDHLVCPNKTD-CPAQTENTLVHFF-KTLGNNDGFGPKVIEKLHEF 443 Query: 443 HRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPF--TRWVMAMGIPLTRAA 500 + I L E + G + L Q ++R R++ A G+ Sbjct: 444 G-IKKIHEIYELKQESFVSF-GFGDKTAQNLVEQLQVSRDVEIEDWRFLAAFGVSRLAGG 501 Query: 501 LNASD--ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKKLGSWLAAQQITGF 558 S L +T + QL G A ++E N IK+ L+A Sbjct: 502 NCEKLLQHHSLDSLFEATVEDLVQLDGFAQVSADAIVEGLAN--IKEEFLKLSALNFNLT 559 >UniRef50_B8FKD5 DNA ligase n=3 Tax=Deltaproteobacteria RepID=DNLJ_DESAA Length = 631 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 99/540 (18%), Positives = 184/540 (34%), Gaps = 56/540 (10%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP-RDVMMPPLNGAVMH 93 L Q ++++++ Y + GK + D YD L RL + G + V H Sbjct: 15 ELLGQWLEKYNEAY-RAGKPMISDAHYDLLVERLREIAPDHGFLSAVEAETFADKREVRH 73 Query: 94 PVAHTGVRKMVDKNALSLWMRERSD-----------LWVQPKVDGVAVTLVYRDGKLNKA 142 P K DK +L ++ V PK+DG+A DG++ Sbjct: 74 PAPMLSTEKAYDKQSLERFVERVYKEAAQIGVTDVLFQVTPKLDGLAAR---DDGQI--L 128 Query: 143 ISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ-QQMGGINARAK 201 +RGNG G D T +PQ G GEI + + + R Sbjct: 129 ATRGNGYAGYDIT-NALEKGVIPQGGRGLGL-----GEIVAVQSYFQENLADRFEHPRNM 182 Query: 202 VAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVA 261 V G++ + + + Q+ L + ++N++++ Sbjct: 183 VVGIISSDVLNISAKQ-------ALEDKQVHFVPYATLNKW----EGSGKELLENSEKIT 231 Query: 262 RVRNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQF 319 + + + DG+V + W +A K + V V AI + Sbjct: 232 QDLIQAT----DYPMDGMVASVMNQDVRDHMGATSHHYRWQIAIKAKGETGVTTVNAITW 287 Query: 320 AVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDD 379 VG++G ++ V + P+ L ++RV + R +E G I V +G+ IP++++ Sbjct: 288 QVGRTGNVTPVLEVEPLKLSGATIRRVTAHNAGRIREKGAGVGASIEVIRSGEVIPKLEN 347 Query: 380 VVWRGAERTKPTPPENRFNSLTC-----YFASDVCQEQFISRLVWLGAKQVLGLDGIGEA 434 V+ + P L + C+ + R+ + + D G Sbjct: 348 VLTPSDDTLIPENCPVCETPLEWNNDFLKCPNLNCKARVEQRIRHWF-RILGNADWFGIK 406 Query: 435 GWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPF--TRWVMAM 492 L F+ + +T E + +S L NL++ +P R++ A Sbjct: 407 TVERLV-AGGFDSLEKIYAMTEEDFLSLE-FGPVQSKNLAEAINLSKSRPVEDWRFLAAF 464 Query: 493 GIPLTRAALNASD--ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN--AQIKKLGS 548 GI + +LL T L G G + + + + I+ + Sbjct: 465 GISDLGEGDSRKILSFFPLEELLDKTRDDIVALHGFGDVTSISIEKGLKALGPTIRHMLD 524 >UniRef50_A3D5Y2 DNA ligase n=1 Tax=Shewanella baltica OS155 RepID=DNLJ_SHEB5 Length = 648 Score = 351 bits (900), Expect = 6e-95, Method: Composition-based stats. Identities = 99/541 (18%), Positives = 186/541 (34%), Gaps = 59/541 (10%) Query: 31 QEEISRLQQ----QIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP-RDVMMP 85 +E I L + + + + ++ G +ED +YD + + + Sbjct: 32 KESIDELSEDELLALLKVTNALYRSGFPVIEDILYDSFWNKFALNHPNHPFITSVETEVL 91 Query: 86 PLNGAVMHPVAHTGVRKMVDKNALSLWMR-------------ERSDLWVQPKVDGVAVTL 132 L V P K K + W+ ++ + PK+DG A Sbjct: 92 NLGKTVALPQKMLSTDKAYSKEEIKKWLDRILKAAEELDIDTNEIEIRITPKLDGYAA-- 149 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI-QQ 191 + DG+ + +RG+G+KG+D ++ V + L GEI + + + Sbjct: 150 -FDDGE--RLYTRGDGVKGQDVSRAFERGLKVVRNSERGLGA----GEIVINKAYFEKKL 202 Query: 192 QMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYT 251 N+R A ++ ++ + + A +G + L T Y Sbjct: 203 SQYFENSRNIQAAIIAEKNVDERVLE------AIKEGACVFH-PFAVLPNW----TGNYQ 251 Query: 252 RAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEP--ESRHWLPGQAEWLVAWKYQPVA 309 + + D + E + + DGV++ A E W +A+K Sbjct: 252 DLMTDFDGII----EQVWNSVEYDVDGVILEATDTRIKEHMGANRKFHRWQIAFKINDEV 307 Query: 310 QVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSL 369 EV ++ ++G+++ VA L P + + RV + + + PG + + Sbjct: 308 AEVEVISVTPQTSRTGRVTPVAELVPTRISGAMISRVTVHHYNMVKINGVGPGAIVQIVR 367 Query: 370 AGQGIPRIDDVVWRGAERTKPTPPENRFN------SLTCYFASDVCQEQFISRLVWLGAK 423 +G IP+I+ V+ + P + + L C SD C Q + LV K Sbjct: 368 SGLVIPKIEKVIKPVDPQMPELCPSCKSHLLWESDHLVCPNKSD-CPAQTENTLVHFF-K 425 Query: 424 QVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQ 483 + DG G L +HI L P Q G + S L+ Q ++ Sbjct: 426 TLANNDGFGPKNIEKLANLG-VKHIHQMYDLKPHQF-AMYGFGEKTSKNLYDQLQASKNI 483 Query: 484 PF--TRWVMAMGIPLTRAALNASD--ERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKE 539 R++ A G+ S +L +T + +L G A +++ Sbjct: 484 EIEDWRFLSAFGVSRLGGGNCEKLLQHYSLRELFEATVEDIAELNGFARVSAEAIVKGLA 543 Query: 540 N 540 N Sbjct: 544 N 544 >UniRef50_A6DPT5 NAD-dependent DNA ligase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DPT5_9BACT Length = 647 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 90/531 (16%), Positives = 184/531 (34%), Gaps = 42/531 (7%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD-VMMPPLNGAVM 92 I L+ ++ Q + Y G+S + D YD L ++ + RD V V Sbjct: 3 IDALKAKLDQANQLYRTGGESPLSDAEYDYL------LEQVNDQKFRDKVGYEIEKNKVE 56 Query: 93 HPVAHTGVRKMVDKNALSLWMRE-----RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGN 147 V + K+ + + W + +++ V PK DG+++ + + DG A +RG+ Sbjct: 57 LAVPMGSLNKIKTQAEVFDWSKSKSIPLDTEICVTPKYDGLSLLVYFVDGIYKGAYTRGD 116 Query: 148 GLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHI-QQQMGGINARAKVAGLM 206 G+ G+D + ++ + + GE + + N R VAGL+ Sbjct: 117 GMFGQDVGEHFTVNPLCDLRLPQDFTGYLI-GECIMDEAKFQTKYSEKFKNPRNMVAGLL 175 Query: 207 MRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKEL------ATAGFTLTQTYTRAVKNAD-E 259 R+ S L + + E A + + + D E Sbjct: 176 SRKTLSRELADVCYVAYGVRSAQMAHKQDQVEFCNRYINAQWKYKVLCPLYKLEDLKDAE 235 Query: 260 VARVRNEWWKAELPFVTDGVVVRAAKEPE----SRHWLPGQAEWLVAWKYQ-PVAQVAEV 314 + +V + + F DG+V+ + AWK + + + V Sbjct: 236 LQKVYDSETR----FQCDGLVLEINDSDLFHQIGKETNSLNPGAARAWKPESDDSLPSIV 291 Query: 315 KAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGI 374 K + + + K+G V + P+ L + V + R ++ IA G + + +G I Sbjct: 292 KEVVWQISKNGAAKPVIRIEPIDLAGVTISNVTGINARFIEDSGIAKGATVTIIRSGDVI 351 Query: 375 PRIDDVVWRGAERTKPTPPENRFNSLTC-------YFASDVCQEQFISRLVWLGAKQVLG 427 P++ V P + + L + +C + L+ + L Sbjct: 352 PKVIGVPNAIENVDLPKQCPSCESELVWNENRVDIVCENKLCPATNKAALIDFFS--TLK 409 Query: 428 LDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA-RKQPFT 486 D +GE +L + + + L LT E L G + K+ ++ ++ P Sbjct: 410 ADEVGEGIITSLWDAGY-QSVKNLLNLTMEDLLKLEGFKQRKAKKVLDSIKISVVDVPLP 468 Query: 487 RWVMAMGI-PLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIE 536 R A + ++ + + + ++ G A+ ++ Sbjct: 469 RLQHASNLFKGLGEKKLELLQKYDQAGIKPSFEELLEVDGYSEISAKSYLD 519 >UniRef50_B9ZQN7 DNA ligase (NAD(+)) n=2 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQN7_9GAMM Length = 652 Score = 347 bits (891), Expect = 7e-94, Method: Composition-based stats. Identities = 98/554 (17%), Positives = 180/554 (32%), Gaps = 57/554 (10%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLS-ARLTQWQRCFGSE--PRDVMMPPLNGA 90 + L ++ + Y + G+ V D VYD L A L++ Sbjct: 30 VDELATACERLNASY-RAGQPLVPDAVYDHLFIATLSEKDPEHPFLKAVEPEGEAFEGDT 88 Query: 91 VMHPVAHTGVRKMVDKNALSLWMRE-------------RSDLWVQPKVDGVAVTLVYRDG 137 V H K ++ L ++ + PK+DG+A + DG Sbjct: 89 VKHDTPMLSTDKAYTEDELRRFLGRVEVAAEALGIRSETLTFRMTPKLDGIA-GMQRPDG 147 Query: 138 KLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGIN 197 +L +RGNG G D + P P + E+F Q E I+ G + Sbjct: 148 RLV---TRGNGFAGADISHAFERGLRTPDGSMEPGPGELVLEEMFFQDE--IRVAFGMPH 202 Query: 198 ARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNA 257 R VAG + +DT+ D ++ ++L + + + Sbjct: 203 PRNFVAGFV----GADTVKPHHQKA---ADAQAIIFFPYRQLPAW----QASAAVVMASW 251 Query: 258 DEVARVRNEWWKAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVK 315 E R E + +P+ TDGVV+ E W VA K + V+ Sbjct: 252 QE----RMEALRQAVPYRTDGVVLEVTDETVKAHMGSTSHHHRWRVALKTKGEVAHVRVR 307 Query: 316 AIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIP 375 I+ G++G+I+ V PV+L ++ V + + + G +I +S AG IP Sbjct: 308 DIRIQTGRTGRITPVLEFDPVLLTGARISNVTAHTAANLAQQGLGVGAEIEISRAGDVIP 367 Query: 376 RIDDVVWRGAERTKPTPPENRFNS-------LTCYFASDVCQEQFISRLVWLGAKQVLGL 428 +++ V+ +E T + + C + C Q +RL Sbjct: 368 KLERVLEPASEPMTVTHCPSCGHEAEVEGEYAVCPN-TVGCLAQAEARLRHFFHVMG-NA 425 Query: 429 DGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA--RKQPFT 486 D G L + + L + G +++ L + P Sbjct: 426 DLFGPKTVEVLVENGH-TDLRGLFDLNAVAFVSM-GFGPGQASNLVRELARCLREAVPDW 483 Query: 487 RWVMAMGIPLTRAALNASDER--SWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIK 544 R++ A+G+ + + T + + G G + + E + + Sbjct: 484 RFLAALGLRHLGRGDSRKLLAVYPLESITNLTAEDIAAVEGFGPITSASIAEQLQEQ--R 541 Query: 545 KLGSWLAAQQITGF 558 + + Sbjct: 542 ERIEAMIRLGFNLE 555 >UniRef50_Q91FW5 Putative DNA ligase 205R n=1 Tax=Invertebrate iridescent virus 6 RepID=VF205_IIV6 Length = 615 Score = 334 bits (857), Expect = 5e-90, Method: Composition-based stats. Identities = 109/527 (20%), Positives = 210/527 (39%), Gaps = 54/527 (10%) Query: 42 KQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVR 101 ++ D Y+ K + D YD L+ +L +V PL P+ + Sbjct: 26 EKADHFYFNTEKEILTDNEYDILAEQLQ---------STNVGCSPLISKTDLPLWMGSLD 76 Query: 102 KMVDKNALSLWMRERS--DLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVS 159 K+ + L+LW+++ + +Q K+DGV+ ++ +D KL KA +RGNG G D + + Sbjct: 77 KVYNDKELNLWIKKVASDKYIIQCKLDGVSCLIINKDNKL-KAYTRGNGKVGTDISHLIK 135 Query: 160 LI---SAVPQTVSGPLANSTLQGEIFLQREGH-IQQQMGGINARAKVAGLMMRQDDSDT- 214 +P ++ L+ EI +++E + + N R+ V+G++ R+ ++ Sbjct: 136 YFIKDKCLPNNIA-------LRCEIIIKKETFNQKYKHAFSNPRSFVSGVVNRKQENIVI 188 Query: 215 --LNSLGVFVWAWPDGP--------QLMSDRLKELATAGFTLTQTYTRAVKNADEVARVR 264 LN L + + + P + +++L F +T + ++ + Sbjct: 189 SELNDLCLIAYELINFPVNEYQKNILTQIEIIEQLNFIQFVNFKTISNEFLTQKALSNLF 248 Query: 265 NEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQ-PVAQVAEVKAIQFAVGK 323 E L F DG+V+ A P R G + +A+K + + A+V I++ VGK Sbjct: 249 KEMKNNSL-FEMDGLVI-LANTPYIR-VTEGNPKHSIAFKVRGDNVKEAKVTFIEWNVGK 305 Query: 324 SGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR 383 +G + + P ++ V + E I G ILV+ AG IP+I V + Sbjct: 306 TGVFTPKVHIVPTEINGTTVSCFTGFNANYLIEKGIGEGAIILVTRAGDAIPQIIGV-KQ 364 Query: 384 GAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH 443 T P E + + +E+ I +++ + + + I EA L+ Sbjct: 365 TGVLTFPKDYEWKGDCRIVEKIES--KERIIKQILHFV--ESVDIPYIKEATINKLYNNG 420 Query: 444 RFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFTRWV---MAMGIPLTRAA 500 I +L LT + L S+ +++ + + P +++ A G Sbjct: 421 C-TSIELFLKLTQKDLLL---FGPKLSSTIYNSIQKSFEAPIEKFLSGYNAFG-DYIGEK 475 Query: 501 ---LNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIK 544 L + +L + G GS A Q+ + NA++ Sbjct: 476 KILLLLQKYPNLFELENLDAIDLVSIEGIGSKTATQIKQHFINAKLI 522 >UniRef50_A9S561 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S561_PHYPA Length = 1163 Score = 330 bits (847), Expect = 8e-89, Method: Composition-based stats. Identities = 82/394 (20%), Positives = 132/394 (33%), Gaps = 65/394 (16%) Query: 13 CWQSSVWAVCPAWSPAR-------AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLS 65 +S AV A S + + + L++ I + Y G + D YD L Sbjct: 292 LLAASKGAVETADSESEHPLVDGDILDRVETLRRVIADYSYQYHTLGNPLISDSAYDALV 351 Query: 66 ARLTQWQRCFG------SEPRDVMMPPL--NGAVMHPVAHTGVRKMVDKNALSLWMRERS 117 L + S V PP V H V + + ++ L W Sbjct: 352 RELKDLESKLPAEASEESVTAKVGAPPPLEIAKVRHAVPMLSLAAVYKEDELKAWHERLQ 411 Query: 118 D---------------LWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLIS 162 V+PKVDG+A+TL+Y GKL A +RG+G +GED T + Sbjct: 412 QRLNRMSNGEQPSTGAWVVEPKVDGIALTLLYERGKLVCAATRGDGAEGEDVTHNARNLK 471 Query: 163 AVPQTVSGPLA-------NSTLQGEIFLQREGHIQQQ--------MGGINARAKVAGLMM 207 VP+ +S ++GE+++ + N R AG M Sbjct: 472 GVPEVLSDHHKEINLQESVLEVRGEVYMTLLDFQELNDMKVKGGEKPFANPRNATAGSMR 531 Query: 208 RQDDSD-TLNSLGVFVWAWPDGPQL--------------MSDRLKELATAGFTLTQTYTR 252 + D L +A D L L F++ R Sbjct: 532 ILKNRDGDDRRLSFMAYAILSPEDNVSAGVETPPRLVRAQWDALNLLKQLDFSVNDD-NR 590 Query: 253 AVKNADEVARVRNEWW--KAELPFVTDGVVVRAAKEPES--RHWLPGQAEWLVAWKYQPV 308 + D+ W ++ L + +DGVV + + W VAWK+ Sbjct: 591 KFASFDDALHYATRWRDSRSTLKYESDGVVFKINDLATQAKLGVVGSDPRWAVAWKFAAT 650 Query: 309 AQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKK 342 V ++ I+ ++G+SG I A L + + Sbjct: 651 EVVTILEGIELSIGRSGAIIPNARLKDITVSSSS 684 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 18/198 (9%) Query: 376 RIDDVVWRGAER-----TKPTPPENRFNSLTCY-------FASDVCQEQFISRLVWLGAK 423 ++ V+ P LT ++ C + ++ K Sbjct: 830 QVVQVLRELRSDHMHSWVPPDRCPFCNGELTVSKDNNITSCCNNKCPGRHSRKIKHFA-K 888 Query: 424 QVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQ 483 + G+G + L + + L L G+ + +A+L ++ + Sbjct: 889 TLF--KGLGPSILSDLEEAGMVVDPADFYALDVVSLSRLDGLGEKSAAKLVKAIEESKGK 946 Query: 484 PFTRWVMAMGIPLTR---AALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN 540 + A+GIP A L S +LL ++ + +PG G+ A + +W + Sbjct: 947 ALWELITALGIPSVGVTAAKLLEQWFGSMERLLVASREELLLVPGIGTVSASAIHDWCTD 1006 Query: 541 AQIKKLGSWLAAQQITGF 558 +L S + + Sbjct: 1007 PFNVQLVSSIKEAGFSPT 1024 >UniRef50_A3JLD8 Putative uncharacterized protein (Fragment) n=1 Tax=Marinobacter sp. ELB17 RepID=A3JLD8_9ALTE Length = 490 Score = 330 bits (847), Expect = 9e-89, Method: Composition-based stats. Identities = 95/500 (19%), Positives = 165/500 (33%), Gaps = 62/500 (12%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPR-DVMMPPLNGAVMH 93 ++++ +++ +D Y S + D YD L L + + G V H Sbjct: 19 RQIEESLERANDAYRNTDDSIISDSDYDALIDELARRDPGHALLTEVESEADFGAGKVRH 78 Query: 94 PVAHTGVRKMVDKNALSLWMRERSD------------LWVQPKVDGVAVTLVYRDGKLNK 141 + K+ + LS W+R L V K+DG+A L +DG L Sbjct: 79 QIPMLSTEKVKTDSELSAWVRRVESAAQNIGIRTPVLLSVTAKLDGMAGRL--KDGVL-- 134 Query: 142 AISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQ-QMGGINARA 200 SRG+GL G + T +P+ V + + GE+ + + + + R Sbjct: 135 -ASRGDGLTGNNITH------ILPKLVVHGVGD----GELVMIQSYFDEHLSEEFKHPRN 183 Query: 201 KVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEV 260 V G + S F T TR D + Sbjct: 184 VVTGAVGADTPRPAAMK----------ALNDHS--------IHFVSFTTLTRIDSRTDTI 225 Query: 261 AR---VRNEWWKAELPFVTDGVVVRAA--KEPESRHWLPGQAEWLVAWKYQPVAQVAEVK 315 E+ P+ TDG+V+ + + W+VA K V Sbjct: 226 VAQLPEIREYLLGNTPYPTDGLVLAVESPELRKELGSTGHHHNWMVAAKTVGETATTAVV 285 Query: 316 AIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIP 375 +Q+ +GK+G+++ V L V L + V + + +E I G ++ +G+ IP Sbjct: 286 GVQWQIGKTGRLTPVIQLKKVTLSGAVIANVTGHNAGKVEEMGIDVGAMATITRSGEIIP 345 Query: 376 RIDDVVWRGAERTKPTPPENRFNSLTCY-----FASDVCQEQFISRLVWLGAKQVLGLDG 430 + + PT L ++ C+ + +RL +D Sbjct: 346 FLVSATPAPNGASLPTHCPACTEHLKRRGDFLVCINNECEGRRHARLHHFFNIIG-SIDL 404 Query: 431 IGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQPFT--RW 488 G L I +T + + G +SA L + A+ +P R Sbjct: 405 FGPVACDKLIAAG-VRSIQEVFAITAAEFEAM-GFGPGQSANLVAELEAAKTRPVDDFRV 462 Query: 489 VMAMGIPLTRAALNASDERS 508 + AMGI + R Sbjct: 463 LAAMGISNLGRGDSKKLLRH 482 >UniRef50_A5CXB8 DNA ligase n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=DNLJ_VESOH Length = 632 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 96/534 (17%), Positives = 172/534 (32%), Gaps = 60/534 (11%) Query: 35 SRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP-----RDVMMPPLNG 89 L + + Y + GK + + YD + L + + P Sbjct: 23 EELSIFCQTANLAY-RSGKPIISNEDYDFIY--LATLKNKEPNNPLFKSIEPEGRAFAEE 79 Query: 90 AVMHPVAHTGVRKMVDKNALSLWMR-------------ERSDLWVQPKVDGVAVTLVYRD 136 V+ P + K N +S W+ + PK+DG A + D Sbjct: 80 KVLLPELMLSIDKAYSWNEMSKWIERLEKSGMLIGLDLNAIQIKATPKLDGFAG---FDD 136 Query: 137 GKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQ-QQMGG 195 G N+ +RG+G KG D ++ V + L GEI +++ + Sbjct: 137 G--NRLYTRGDGKKGSDISRVFKRGLCVFKDSGRGLGA----GEIVVKKSYFEKYLVHSF 190 Query: 196 INARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK 255 R + L+ + + A D L +K L + + T V Sbjct: 191 EYPRNFQSSLIKEKALDEQAQK------AIIDKGALFVPFIK-LPIW----SGSMTELVA 239 Query: 256 NADEVARVRNEWWKAELPFVTDGVVVRAAKEPE--SRHWLPGQAEWLVAWKYQPVAQVAE 313 +E+ + F DGVV W +A+K + Sbjct: 240 KFEEIVSQVLVM----VDFDVDGVVFEVINIDLKTQMGANRKFHRWQIAFKENKDIVQVK 295 Query: 314 VKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQG 373 V + VG+SGKI+ VA + P +L + RV +E + G + ++ +G Sbjct: 296 VLNVMPQVGRSGKITPVAEVEPTLLSGATIVRVTGHHYGLVKEQGLGIGSVVELTRSGLV 355 Query: 374 IPRIDDVVWRGAERTKPTPPENR----FNSLTCYFASD-VCQEQFISRLVWLGAKQVLGL 428 IP+I V+ + S + C Q I R+ + Sbjct: 356 IPKIISVLKPMPVDIPDNCLSCGMPLVWESDFLVCVNHKNCPAQIIGRITYFFKVLA-NN 414 Query: 429 DGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNL--ARKQPFT 486 DG G A L+ + + L E+L G + S L Q + + K Sbjct: 415 DGFGIATVEKLYAHN-IRSVSQIYTLNVERLMAI-GFGEKTSINLISQLSRSISEKIEDW 472 Query: 487 RWVMAMGIPLTRAALNASDERS--WSQLLFSTEQFWQQLPGTGSGRARQVIEWK 538 R++ A G+ + +S + + T + + G A+ +++ Sbjct: 473 RFLAAFGMHRMGLGNCENLLKSYRLNDIFDLTLEQITNIDGFAELTAQVIVQGL 526 >UniRef50_Q5UPZ0 DNA ligase n=1 Tax=Acanthamoeba polyphaga mimivirus RepID=DNLJ_MIMIV Length = 636 Score = 310 bits (796), Expect = 6e-83, Method: Composition-based stats. Identities = 94/504 (18%), Positives = 180/504 (35%), Gaps = 33/504 (6%) Query: 18 VWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS 77 +WA+ P+ + +E +S + Y G S + D YD L RL + S Sbjct: 13 LWAILPSLNATDIEEALSVSSEY-------YHNTGTSLISDQEYDILMDRLKEL---NPS 62 Query: 78 E--PRDVMMPPLNGAVMHPVAHTGVRKMV-DKNALSLWMRERSD-LWVQPKVDGVAVTLV 133 V P V P + K+ D+ A++ W+ E S + K+DG++ L Sbjct: 63 SKIFAQVGAPVKGKKVKLPFWMGSMNKIKADEKAVNKWLNEYSGPYVISDKLDGISCLLT 122 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQM 193 ++ K K +RG+G G+D T + LI+ + + ++GE+ + ++ + Q Sbjct: 123 IKNNK-TKLYTRGDGTYGQDITHLLGLINIDIGLLEEIDQDIAIRGELIMSKKNFEKYQE 181 Query: 194 GGINARAKVAGLMMRQD---DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTY 250 NAR V G++ + + D + + + +S +LK L G + Y Sbjct: 182 IMANARNMVGGIVNSKPESVNKDHAADVDLIFYEVIKPNDKLSRQLKILKEWGLKVV--Y 239 Query: 251 TRAVKNAD-EVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVA 309 K D + K + + DG++V + + G + A+K Sbjct: 240 YNIYKTFDVNILESVLSERKKKSGYEIDGIIVTDNNKHVR--NISGNPSYSFAFKGDTPT 297 Query: 310 QVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSL 369 VK + + K G + V L + ++ + + + I G I V Sbjct: 298 IDTVVKRVIWTPSKDGVLVPRIKFKKVRLSNVDLEYTTGFNAKYIVDNKIGSGAIINVVR 357 Query: 370 AGQGIPRIDDVVWRGAERTKPTPP---ENRFNSLTCYFASDVCQEQFISRLVWLGAKQVL 426 +G IP I VV + P + ++ +D + I RL + + Sbjct: 358 SGDVIPYITHVVKPAKKPDLPNIEYVWDKNGVNIILADINDN-ETVIIKRLTKF--MRNI 414 Query: 427 GLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA-RKQPF 485 G + I E L + + I + +T E G + + ++++ + Sbjct: 415 GAENISEGITTRLVEAGF-DTIPKIINMTEEDFLTIDGFQERLAEKIYNNLQNSLDNLDI 473 Query: 486 TRWVMAMGIPLTRAALNASDERSW 509 + A I + Sbjct: 474 LTLMDASNIF--GRGFGTKKFKKI 495 >UniRef50_B2ZXT5 NAD-dependent DNA ligase n=1 Tax=Ralstonia phage RSL1 RepID=B2ZXT5_9CAUD Length = 625 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 88/551 (15%), Positives = 191/551 (34%), Gaps = 46/551 (8%) Query: 31 QEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP---RDVMMPPL 87 + +++ ++ KQ Y+++ + + D +D L + + + V + Sbjct: 5 AQNLNKAKKLYKQARVAYYEKAE-IMTDAEFDALEDSIRRLDPKWDELQKTGTKVEVKNK 63 Query: 88 NGAVMHPVAHTGVRKMVDKNALSLWMRE--RSDLWVQPKVDGVAVTLVYRDGKLNKAISR 145 V K+ ++ + V K+DG ++ L YR G+ K I+R Sbjct: 64 KQEVKLLEFMPSKNKIYPEHVAKYAAKHASVEVWNVSHKLDGTSLQLAYRGGRPWKLITR 123 Query: 146 GNGLKGEDWTQKVSL---ISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG-GINARAK 201 G+G G+D + + I +P + + E + ++ G NAR Sbjct: 124 GDGALGKDISFFLPHLVKIGMIPDHIKTDALVVVFRCEGIMPVAVFEKKWAGKYDNARQL 183 Query: 202 VAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQT-YTRAVKNADEV 260 G+ RQD L + + V + + + GF + T + +A+ + Sbjct: 184 ANGVFNRQDMHPALADVHMVVLSVYGMK--QGEGIMYAKRQGFHVVPTRMLKGRLDAEVL 241 Query: 261 ARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLP-GQAEWLVAWKYQPVA--QVAEVKAI 317 R+ N+ +A + + DG+++ P + + + + A+K+ V+++ Sbjct: 242 TRLLNKEREASI-YEMDGLILV--PSPRIMSYTSPDRPKDITAFKFNDEENAAEVPVESV 298 Query: 318 QFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRI 377 + + + ++ P +D V V + +E I PG + V +G IP+I Sbjct: 299 VWQKTRLHRWQPKITIKPTFMDGVMVTNVTAHNPAWMKERGIGPGAIVKVLRSGGVIPKI 358 Query: 378 DDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWR 437 VV +G + P P + ++ + + LG++ + Sbjct: 359 VGVVKKGKFQPPPGPYVEDG---RLFRMTEGDASTEVRGIHHF--MTTLGIELLASKTIT 413 Query: 438 ALHQTHR--FEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLAR--KQPFTRWVMAM- 492 L++ + E T GI S ++ + ++A Sbjct: 414 KLYEEGFTTVYDYIDLAINGDEGRLQTAGIGVKMSQKIQAELERVLGSTINLRLLMVASG 473 Query: 493 ----GIPLTRAALNASDERSWSQLLFST----EQFWQQLPGTGSGRARQVIE-------W 537 GI + + S LL S+ ++ G VI+ W Sbjct: 474 CFRDGIGRRKLEALEAAGISMRFLLKSSDFALRGELSKVKGFSDITIEAVIDGVNAFRKW 533 Query: 538 KENAQIKKLGS 548 + ++++L Sbjct: 534 FD--EVRELLE 542 >UniRef50_Q197A8 Putative DNA ligase 052L n=1 Tax=Invertebrate iridescent virus 3 RepID=VF205_IIV3 Length = 756 Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats. Identities = 88/511 (17%), Positives = 184/511 (36%), Gaps = 53/511 (10%) Query: 32 EEISRLQQQIKQWDDDYWKE-GKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGA 90 E+ ++L + ++ D Y+ G + D YD L + + G + + P + + Sbjct: 7 EKYNQLLKLKEKADKAYYNGVGDPIMSDEEYDNLVDYMDELNPDGGVKTKVGASPSRSKS 66 Query: 91 VMHPVAHTGVRKMVDKNALSLWMR---ERSDLWVQPKVDGVAVTLVY--RDGK--LNKAI 143 V P+ + K+ ++ WM+ ++ L V+ K+DGV+ V+ K + Sbjct: 67 VKLPMPMNSLDKIKTQHEFDNWMKNWKPKAMLLVKEKLDGVSCLAVFTLEQNKPPKIELF 126 Query: 144 SRGNGLKGEDWTQKVSLI----------------------------SAVPQTVSGPLANS 175 +RG+G G + T+ ++ A+ P+ Sbjct: 127 TRGDGTTGTNITRLLNHGLKVGNDYCFDDMVNEDKWTTDWGCYLNAEAIDHWKKLPVKKV 186 Query: 176 TLQGEIFLQREGHIQQQMG-GINARAKVAGLMMRQDD-SDTLNSLGVFVWAWPDGPQ--L 231 ++GE+ + R+ +NAR V+G + ++ L + + + Sbjct: 187 YIRGELIVTRKNFQTWYSNRFMNARNLVSGQVNKKSPDPKILQDIDFVPYDLVIDLKRPT 246 Query: 232 MSDRLKELATAGFTLTQTYTRAVKNADEV----ARVRNEWWKAELPFVTDGVVVRAAKEP 287 M+ ++ L T YTR + +D + E K + + DG+V++ + Sbjct: 247 MTHEVEHLLFRMIGATPVYTRFLFLSDTISTESMADYLERRKEKSDYEIDGLVIQVDDDT 306 Query: 288 ESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVN 347 + VA+K V +++ + K K + PV L + +V Sbjct: 307 LFAPPDNRNPKDTVAFKIMGTTARTTVTHVEWNLSKGSKYKPTIHITPVSLSGVTISKVT 366 Query: 348 IGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASD 407 + E I G +L++ +G+ IP I V+ A++ P + + Y+ Sbjct: 367 GFHGKYISENKIGKGAVVLITRSGEVIPHIVSVISPAAKQDVLLPSNGVWKGVDIYYDGA 426 Query: 408 VCQ-EQFISRLVWLGAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIA 466 E + ++V LG G+ L+ + + + ++L G Sbjct: 427 EEPREITVKKMVHFF--TSLGCLGLKTMTVGRLYDAGY-RTVEAIVGADTKKLVLINGFR 483 Query: 467 KSKSAQLWHQ--FNLARKQP--FTRWVMAMG 493 + +L N+A+ P + A G Sbjct: 484 MV-AQKLLPSMWVNVAKATPHELMAALNAFG 513 >UniRef50_D1JM64 NAD-dependent DNA ligase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM64_9BACE Length = 652 Score = 297 bits (761), Expect = 8e-79, Method: Composition-based stats. Identities = 94/557 (16%), Positives = 185/557 (33%), Gaps = 101/557 (18%) Query: 37 LQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFG-SEPRDVMMPPLNGAVMHPV 95 L IK+ + Y + G E+ D YD L + + P+ Sbjct: 13 LLDMIKRHNKMY-RMGAPEISDAEYDAEIELLKTLDPDNEWFKHTEPAFVSETRKRALPI 71 Query: 96 AHTGVRKMVDKNALSLW-----MRERSDLWVQPKVDGVAVTLVYRDGKLN-KAISRGNGL 149 + K+ D + L W ++ + + PK+DG++ L+Y +L +A SRG G+ Sbjct: 72 PMKSLNKVKDISELKKWYMSLGLKGNAGVVCMPKLDGLS--LLY--NELTGEAYSRG-GI 126 Query: 150 K--GEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMG---------GINA 198 + G+D T A Q + + GE + R Q G + Sbjct: 127 ENEGQDCTN---HYQASTQCYNPASSFHYTFGEFVINRSDWEQHFHGKRSKFTGDIFKSP 183 Query: 199 RAKVAGLMMRQDDSDTLNSLGVFVWAWPDG-----------PQLMSDRLKELATAGFTLT 247 R AGL+ R + D L F + + + + + ++ F Sbjct: 184 RNTAAGLLNRDEPCDYLEHASFFRYGVDESSLHDYNNFHSLIETICNIYQQEHLYHFAFI 243 Query: 248 QTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPE----SRHWLPGQAEWLVAW 303 N + + + EW K + DG+V+ RH G + +A+ Sbjct: 244 DEL-----NEELLMNLFKEWSK---IYPIDGIVIYVDDLRLWEVIGRHQTSGNPLYAIAY 295 Query: 304 KYQP--VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAP 361 K+ + VK I + V KSG + V ++ V D ++ + + +IA Sbjct: 296 KHPDFTESFETTVKGIVWKVSKSGALKPVVNIEMVDTGDCNMENPTGYNAGWINDHEIAK 355 Query: 362 GDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTC-------------YFASDV 408 G +ILV+ +G IP+I + + + + C + Sbjct: 356 GAEILVTRSGGVIPKILSTLSPATQEEQEKLWDEMSECPHCGSSTMWNENHIELCCTNPS 415 Query: 409 CQEQFISRLVWL---GAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGI 465 C ++++++ + + GE + I + L +T L G Sbjct: 416 CPGVQLAKIIFFYLTCGAENM-----GEETLSKIFNAGF-TSIPAILNVTFNDLIKIEGF 469 Query: 466 AKSKSAQLWHQFNLARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPG 525 + + RK + L+ +++ F G Sbjct: 470 GD-SISNII--LENNRKI--------------------MQGVDLATLMQASDCF----KG 502 Query: 526 TGSGRARQVIEWKENAQ 542 G +A+++++ ++ Sbjct: 503 IGKIKAQKILDEMDDED 519 >UniRef50_Q9YVT0 ORF MSV162 putative NAD+ dependent DNA ligase, similar to Thermus thermophilus SW:P26996 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVT0_MSEPV Length = 522 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 89/544 (16%), Positives = 201/544 (36%), Gaps = 51/544 (9%) Query: 20 AVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGS-- 77 + + + + + IK ++ Y+ EG++ + D +YD++ + + + Sbjct: 8 KQTSDVNKVLNKISLEDISEIIKILNEKYY-EGETLISDEIYDKIIEYVN---KKYPDND 63 Query: 78 EPRDVMMPPLNGAVMHPVAHTGVRKMVDKNA--LSLWMRE--RSDLWVQPKVDGVAVTLV 133 + + P V P K+ D++ + W+ + S + V K DG++V Sbjct: 64 ITKKIGYEP-KNKVKLPYYMGSENKIYDEDEKKFNNWIEKYGTSSIIVSVKADGISVLWD 122 Query: 134 YRDGKLNKAISRGNGLKGEDWTQKVSLIS-AVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 KL +RG+G G+D + + ++ +P L++ ++GE+ + ++ Sbjct: 123 IGKNKL---YTRGDGNYGKDISWFLKYMNYDLP-----ELSDYVIRGELVINKDKT---- 170 Query: 193 MGGINARAKVAGLMMRQD---DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFT--LT 247 R VAG + + + D L + + + ++ K+L Sbjct: 171 ------RNDVAGAINSLEANRNEDILKEIYFVGYEILNPRFNQENQFKKLKQHKIRHIKA 224 Query: 248 QTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQP 307 Y + + ++ + E K ++ + DG+V+R + G W A+K Sbjct: 225 MKYDIEDVSLECLSELYQE-LKPKMKYDIDGLVIRNNNVNDPI--TDGNPPWSFAYKPPN 281 Query: 308 VAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILV 367 +V + + + K K +A L P+ L++K ++RV+ + + E I + + Sbjct: 282 TIYTTKVLNVIWQISKQNKYIPIAELEPIKLENKTIKRVSCYNAKFVTENGIGTDAIVEI 341 Query: 368 SLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLG 427 G IP++ +V+ + P+ + Y D +E I + ++L Sbjct: 342 EYRGGAIPKLVNVIKPVTV-DESDLPDGKIIDNHLYAPIDS-KESNIKIISQFF--KILS 397 Query: 428 LDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLARKQP--F 485 + + L+ +I L L K + H N+A+ Sbjct: 398 IQAPNKKVIEHLYDNG-ITNIVELL---KSDLTELLDTTKKINKNALHSINIAKSIEISL 453 Query: 486 TRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKENAQIKK 545 + A+ IP + + L T+Q ++++ G A ++ + + K Sbjct: 454 PLAIAALSIPNLTEKVLEKIYNTHKDFLT-TKQDFEKIKGINKLSAEKIKS--QILKNKN 510 Query: 546 LGSW 549 + Sbjct: 511 MIDE 514 >UniRef50_B2I4G8 NAD-dependent DNA ligase subunit A n=3 Tax=Siphoviridae RepID=B2I4G8_9CAUD Length = 323 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 80/359 (22%), Positives = 144/359 (40%), Gaps = 49/359 (13%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMH 93 ++ +++ IK+ + Y++ G S + D YD+L R + G G + H Sbjct: 1 MTNVKEFIKRCQEAYYQ-GMSLISDEEYDRLIKRF-PLEEEIG----------PKGDIPH 48 Query: 94 PVAHTGVRKMV----DKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGL 149 ++K+ DK + + +D K+DG A++L+Y +G+ +A++RGNG+ Sbjct: 49 LYRMYSLQKVYYGRGDKAPFNPLGQVETD-----KLDGCAISLLYINGEFVQALTRGNGI 103 Query: 150 KGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQ 209 G D T V + +P+T+S + + GE+ + +E N R +G + + Sbjct: 104 LGNDVTHNVK-MLNIPKTISQKVPT-QITGEVLITKEV--------ENKRNYASGAINLK 153 Query: 210 DDSDTLNSLG-----VFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVR 264 D D + +G + + + L L V N + Sbjct: 154 DSDDFIQRIGEGGLIFVAYGIQCSAETVGITEAYLKDM-LWLENENFLTVVNVRSFFKWI 212 Query: 265 NEWWKAELPFVTDGVVVRAAKEPE--SRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVG 322 TDG VVR + W A K ++ + +++ VG Sbjct: 213 ----------PTDGKVVRINDNNKFFREGWTNKFPRGAFAIKEDEEGEITTLVKVEWQVG 262 Query: 323 KSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV 381 SGK++ V PV++DD + + + +V D+ G QI V AG IP I + V Sbjct: 263 ASGKVTPVGYFEPVIIDDATIVKATLNNVDYINALDLEIGCQIRVIRAGGVIPCIVERV 321 >UniRef50_A6FGB3 DNA ligase, NAD-dependent, putative n=1 Tax=Moritella sp. PE36 RepID=A6FGB3_9GAMM Length = 413 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 87/376 (23%), Positives = 156/376 (41%), Gaps = 19/376 (5%) Query: 22 CPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRD 81 CP+ Q IS L+ QI + Y+ + DG +D L LT C Sbjct: 44 CPSVLN---QHRISYLETQIIKHRRIYYAGQTPLLHDGEFDLLVDELTVLSHCLSPVLTQ 100 Query: 82 VMMPPLNGA-------VMHPVAHTGVRKMVDKNALSLWMR--ERSDLWVQPKVDGVAVTL 132 + L H + + ++ A+ + + + L +QPK DG+A+ L Sbjct: 101 IGGGNLQHNDTRQRDRQPHRQQMLSLNSVRERTAVDKFYQLHQDQQLLIQPKFDGMAIEL 160 Query: 133 VYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQ 192 VY G L A SRG+G +G+D + +AV ++ P + GE+++ ++ Q + Sbjct: 161 VYEKGMLVGASSRGDGKQGKDLLALMLRSNAVNSMIAYPYT-LVIHGELYVGQQDW-QLR 218 Query: 193 MGGINARAKVAGLMMRQDDSDT-LNSLGVFVWAWPDGPQLMSDR-LKELATAGFTLTQTY 250 +++R AG+ + + T + SL W W D P L +LA GF Sbjct: 219 GKYVSSRHMTAGIASQLSPAQTDVMSLRFMPWRWIDSPYNNELMGLAQLAMLGFADMSKM 278 Query: 251 TRAVKNADEVARVRNEWWKAELPFVTDGVVVRA--AKEPESRHWLPGQAEWLVAWKYQPV 308 + + ++ + E F+ DG+V++ W +A K+ Sbjct: 279 SHVIDRPQDIDYWLAHYQNTE-AFLLDGIVLKLANNTLQRQYGHTQHAPRWALALKFTGP 337 Query: 309 AQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVS 368 ++ V I + VGKSG+++ + + P+ L ++V RV+ S + I G Q+ + Sbjct: 338 KGLSNVIDITYQVGKSGRVTPIIHVQPLALSGRQVTRVSGRSQPWLLQSKIEVGSQVEIE 397 Query: 369 LAGQGIPRIDDVVWRG 384 L G P++ +V Sbjct: 398 LVGNATPQLTRLVSDR 413 >UniRef50_Q9EMK7 AMV199 n=1 Tax=Amsacta moorei entomopoxvirus 'L' RepID=Q9EMK7_AMEPV Length = 532 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 84/535 (15%), Positives = 188/535 (35%), Gaps = 49/535 (9%) Query: 34 ISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEP--RDVMMPPLNGAV 91 + L+ I+ D+ Y+ + + D YD + + +E + + P V Sbjct: 25 YNDLENIIQTLDNSYYDKEA-LISDKKYDLIR---NFINNKYPNESLCKKIGYTP-EDKV 79 Query: 92 MHPVAHTGVRKMV-DKNALSLWMRERSD--LWVQPKVDGVAVTLVYRDGKLNKAISRGNG 148 K N L W+ E L + K DG++V ++ NK SRG+G Sbjct: 80 RLKYFMGSENKTYKSDNKLLSWINEYHTNILVLSAKADGISVLWDIKN---NKIYSRGDG 136 Query: 149 LKGEDWTQKVSLI-----SAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVA 203 G+D T ++ + + ++GE+ + + + R VA Sbjct: 137 KYGKDITHFINYFNFSDDKNINNNDIFKNNINFVRGELVIDKPEN----------RNIVA 186 Query: 204 GLMMRQD-DSDTLNSLGVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVK-NADEVA 261 G + R + D +T + + + ++ +L + + + ++++ Sbjct: 187 GQINRNEIDKETALKIYFVAYEILEPRMTQLEQFHKLTENSIRTVKYDSVDYNISYEQLS 246 Query: 262 RVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAV 321 + N + EL + DG+++R G W + +K + VK I++ + Sbjct: 247 EIYNNYT-QELSYYIDGIIIRNNNLNPVI--KSGNPPWSICFKETDKIYITTVKEIKWDI 303 Query: 322 GKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV 381 K A L P+++D+ + V + + + I G + + G IP I++V+ Sbjct: 304 SKKNIYIPKAILEPIIIDNSTINAVACHNAKYVIDKKINTGSIVEIVKKGGVIPIINNVI 363 Query: 382 WRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQ 441 + P+ + + F +E I R+++ + G I + L+ Sbjct: 364 KESD--IEIILPDGILSGVNIIFTGVN-KESEIKRILYFF--KSFGYKNINKTIIDKLYM 418 Query: 442 THRFEHIFSWLLLTPEQLQNTPGIAKSKS-AQLWHQFN--LARKQPFTRWVMAMGIPLTR 498 + E+ N K+ +L ++ + A+ + Sbjct: 419 LGYVNILKYL-----EKDINIEEYNNKKTYIKLLEVIKDIKSKNYNIVDILTALSLDSIS 473 Query: 499 AALNASDERSW-SQLLFSTEQFWQQLPGTGSGRARQVIEWKEN--AQIKKLGSWL 550 + + + L E+ + + G G ++++ + N I + + L Sbjct: 474 KSRVCAIYNEFPDFLKDKNEKDYSSINGIGKSISKKINDNIINNYEYIINILNAL 528 >UniRef50_C1M1N3 DNA ligase, NAD-dependent, putative n=1 Tax=Schistosoma mansoni RepID=C1M1N3_SCHMA Length = 311 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 77/208 (37%), Gaps = 15/208 (7%) Query: 279 VVVRAAKEPES--RHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPV 336 +VV+ ++ W VA+K+ ++AI++ VG++G ++ VA LAPV Sbjct: 1 MVVKVDDRRLQQDLGFVARAPRWAVAYKFPAQEASTRLEAIEWQVGRTGALTPVARLAPV 60 Query: 337 MLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAE--RTKPTPPE 394 + V + ++ D+ GD +++ AG IP++ + R P+ Sbjct: 61 SVGGVVVSNATLHNIDEVHRLDLRAGDTVVIYRAGDVIPKVMRRLDDDGHAARAPVALPD 120 Query: 395 NRFNS-----------LTCYFASDVCQEQFISRLVWLGAKQVLGLDGIGEAGWRALHQTH 443 + A C Q L +++ + ++G+GE + Sbjct: 121 ACPVCASAVVRPEGEVVARCSAGLFCPAQRKEALRHFASRRAMDIEGLGEKWVDLMVDAG 180 Query: 444 RFEHIFSWLLLTPEQLQNTPGIAKSKSA 471 L+ EQL P + + Sbjct: 181 LLHTPADIYRLSAEQLLQLPRMXXXXAR 208 >UniRef50_A6MA76 Gp012 n=1 Tax=Lactococcus phage KSY1 RepID=A6MA76_9CAUD Length = 471 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 69/387 (17%), Positives = 138/387 (35%), Gaps = 63/387 (16%) Query: 38 QQQIKQWDDDYWKEGKSEVEDGVYDQLS---ARLTQWQRCFGSEPRDVMMPPLNGAVMHP 94 +++++ +++G + D YD L T+ + + H Sbjct: 4 VKELQEA----YEQGTPLMTDAAYDVLVGDNEEFTELEDE-------------TYVIKHA 46 Query: 95 VAHTGVRKMVDKNALSLWMRE---RSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKG 151 V K + L+ + +++ QPK DGV+ L+ GK+ SRGNG G Sbjct: 47 VFMGTCPKTRNVKEFKLYCKGLLGTTNVVFQPKFDGVSGELIVEHGKITAISSRGNGNFG 106 Query: 152 EDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDD 211 +D + + I + + GE + + Q+ R V+G + ++ Sbjct: 107 QDLSD-LKDILFNDVVIM--PTVRAIYGEFVWRNDNPSQKD------RNLVSGYLNKKVH 157 Query: 212 SDTLNSLGVFVWAWPDGPQLMSDRLK-ELATAGFTLTQTYTRAVKNADEVARVRNEWWKA 270 + L + D + D ++ +L T G + + + E+ + Sbjct: 158 NKE-PHLDFIAYKAIDSNGRVMDFMQSQLYTTGIKWSD--CAILTDELEIPNFDGRYP-- 212 Query: 271 ELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVV 330 DG +++ + A K +P A + + + + KS K S Sbjct: 213 --DIKRDGTIIK-NSVD------------IFALKPEPEAGITTITGVTWKKCKS-KFSAT 256 Query: 331 ASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKP 390 A L PV + V V + + ++ D+ GD++++S G IP I+ +V E + Sbjct: 257 AQLEPVTIGAVNVSSVTLP-LSYIKDMDLMIGDKVMISRRGDVIPCIEFLVEHTEESSPI 315 Query: 391 ---TPPENRFNSLTCY-----FASDVC 409 + E Y ++ C Sbjct: 316 INDSKCEYCGGHFHLYGKKLLCENENC 342 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.161 0.491 Lambda K H 0.267 0.0496 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,978,713,287 Number of Sequences: 3077464 Number of extensions: 202938665 Number of successful extensions: 551592 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 964 Number of HSP's successfully gapped in prelim test: 250 Number of HSP's that attempted gapping in prelim test: 544261 Number of HSP's gapped (non-prelim): 2085 length of query: 560 length of database: 1,040,396,356 effective HSP length: 134 effective length of query: 426 effective length of database: 628,016,180 effective search space: 267534892680 effective search space used: 267534892680 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 96 (41.3 bits)