16 c2hivA_ Probab=98.87   E-value=7.1e-07  Score=66.53  Aligned_columns=247  Identities=18%

Q ss_pred             CEECCC-CCCCHHHHCCHHHHHHHHCCCCCEEEEEECCEEEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf             132145-5366565089999998850066599998407489999996998999996588886631657764302130005
Q batch____        90 AVMHPV-AHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTV  168 (560)
Q Consensus        90 kv~h~~-pmlSl~k~~~~~el~~w~~~~~~~~vepKiDGlsi~L~Ye~G~Lv~A~TRGDG~~GeDVT~nv~~i~~IP~~l  168 (560)
                      .+.+|+ |||. ..+.+.++.....  ...+++|.|+||.-+.+.+.+|. ++..||.    |+|+|+....+...-...
T Consensus       215 ~~g~pi~PMLa-~~~~~~~~~~~~~--~~~~~~E~K~DG~R~qih~~~~~-v~~~SR~----g~d~t~~~p~l~~~~~~~  286 (577)
T c2hivA_         215 QVGIPIRPMLA-ERLSNPEEILKKM--GGNAIVDYKYDGERAQIHKKEDK-IFIFSRR----LENITSQYPDVVDYVSKY  286 (577)
T ss_dssp             CTTSCCCCCEE-EECSCHHHHHHHT--TTCEEEEEECSSEEEEEEEETTE-EEEECTT----CCBCGGGCHHHHHHHHHH
T ss_pred             CCCCCCCHHHC-CCCCCHHHHHHCC--CCEEEEEECCCCEEEEEEEECCE-EEEEECC----CCCCHHHHHHHHHHHHHC
T ss_conf             25610153315-5389977887225--87699999058439999997996-9999608----820103217899999824


Q ss_pred             CCCCCEEEEEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHCC--CCEEEEEECC------CCCCHHHHHHHHH
Q ss_conf             5877718999799963647776322489857998989864180766301--4389998338------7578899999999
Q batch____       169 SGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNS--LGVFVWAWPD------GPQLMSDRLKELA  240 (560)
Q Consensus       169 ~~~~~~~eiRGEv~i~~~~f~~~~~~~aNpRNaaAG~l~r~~~~~~~~~--l~~~~y~~~~------~~~~~~e~l~~L~  240 (560)
                      ... ..+.+-||++.     .....+-.-|-.....-.++.......+.  +.|++|.+..      -.....++.+.|.
T Consensus       287 ~~~-~~~ILDGElv~-----~d~~~~~~~~f~~l~~r~~~~~~~~~~~~~~~~~~vFDiL~l~g~~l~~~pl~eR~~~L~  360 (577)
T c2hivA_         287 IEG-KEFIIEGEIVA-----IDPESGEMRPFQELMHRKRKSDIYEAIKEYPVNVFLFDLMYYEDVDYTTKPLEARRKLLE  360 (577)
T ss_dssp             BCC-SSEEEEEEEEE-----BCTTTCCBCCTHHHHHHHHCSCHHHHHHHSCEEEEEEEEEEETTEECTTSCHHHHHHHHH
T ss_pred             CCC-CEEEEEEEEEE-----EECCCCCCCCHHHHHHHHCCCCCCCHHCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHH
T ss_conf             788-64899869999-----727878658988998522023420000138758999720213630314898899999999


Q ss_pred             HCCCCCCHH---HHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCCCCCEEEEEECCC-------CEE
Q ss_conf             879876802---6657389999999999986404988756269985140564043589985058876588-------438
Q batch____       241 TAGFTLTQT---YTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQP-------VAQ  310 (560)
Q Consensus       241 ~~GF~v~~~---~~~~~~~~~~i~~~~~~~~r~~l~y~iDGiViKv~~~~~~~g~t~~~prWAiAyKf~~-------e~~  310 (560)
                      ...-+...-   ....+.+.+++..++++.....    ..|+|+|-.+..-.-....++..|   +|+.+       ++.
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~g----~EGiv~K~l~~~s~Y~~g~Rs~~W---lK~K~dy~~~~~~t~  433 (577)
T c2hivA_         361 SIVKPNDYVKIAHHIQANNVEDLKSFFYRAISEG----GEGVMVKAIGKDAIYQAGARGWLW---IKLKRDYQSEMADTV  433 (577)
T ss_dssp             HHBCCCSSEEECCEEEESSHHHHHHHHHHHHHTT----CCEEEEECCSTTCCCCTTCEEEEE---EEEETTCTTSSCEEE
T ss_pred             HHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCC----CCEEEEEECCCCCCCCCCCCCCCE---EEEEECCCCCCCCCC
T ss_conf             8606788289956775599899999999999769----977999407877741158847744---876401223433210


Q ss_pred             EEEEEEEEEEEC-CCEEEEE--EEEEEEEEECCEEEEEE-ECCCHHHHHHC
Q ss_conf             999812799746-7304646--99996189869899767-54998999967
Q batch____       311 VAEVKAIQFAVG-KSGKISV--VASLAPVMLDDKKVQRV-NIGSVRRWQEW  357 (560)
Q Consensus       311 ~T~l~~I~~qVG-RTG~iTP--VA~lePV~l~G~tVsrA-TLhN~~~i~~~  357 (560)
                      ...|.+..|-.| |+|.++.  +|..+|-.=.-.+|.++ |..+.+..+.+
T Consensus       434 Dlvvig~~~g~gkr~~~~~~fllg~~~~~~~~~~~v~kvgsGfsd~~~~~l  484 (577)
T c2hivA_         434 DLVVVGGFYGKGKRGGKISSLLMAAYNPKTDSFESVCKVASGFSDEQLDEL  484 (577)
T ss_dssp             EEEEEEEEECSGGGTTSEEEEEEEEEETTTTEEEEEEEECBSCCHHHHHHH
T ss_pred             CEEEEEEEECCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHH
T ss_conf             057875420788667711369999994799879999883389999999999