Phyre 2 alignment of P0ABN5 with d1q42a_

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Job Description | P0ABN5
Confidence | 37.92% | Date | Thu Jan 5 11:15:55 GMT 2012
Rank | 6 | Aligned Residues | 27
% Identity | 37% | Template | d1q42a_
SCOP info | Cystatin-like | NTF2-like | NTF2-like
Resolution | 1.75

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 376 | . | . | . | 380 | . | . | . | . | . | . | . | . |  |  |  |  | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | G | L | F | I | L | P | T | Y | P | T | L | V | . | . | . | . | A | A | V | Q | M | D | D | T | G | T | T | R | I | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | D | G | H | L | I | P | G | T | G | T | F | V | V | H | F | S | A | K | V | R | F | D | Q | S | G | R | N | R | L | G
Template Known Secondary structure |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | B |  | S | S |  |  | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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