Phyre 2 alignment of P0ABN5 with c3if4C_

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Job Description | P0ABN5
Confidence | 9.40% | Date | Thu Jan 5 11:15:55 GMT 2012
Rank | 62 | Aligned Residues | 22
% Identity | 32% | Template | c3if4C_
PDB info | PDB header:structural genomics, unknown function | Chain: C: PDB Molecule:integron cassette protein hfx_cass5; | PDBTitle: structure from the mobile metagenome of north west arm2 sewage outfall: integron cassette protein hfx_cass5
Resolution | 2.18 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 387 | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | L | V | A | A | V | Q | M | D | D | T | G | T | T | R | I | G | K | F | V | F | N | H | P | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template Sequence |  | F | V | A | A | I | E | I | D | G | T | G | R | I | H | V | . | . | T | P | G | E | S | Q | F
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | . | . |  |  | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . |  |  | 20 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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