16/01/2012 01:07:17 : INFO  : Run start: Mon Jan 16 01:07:16 GMT 2012
16/01/2012 01:07:22 : INFO  : Initialised job
16/01/2012 01:07:23 : INFO  : Renaming log file 'phyre2_20120116_010716.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/79c1ab28f9820b41/phyre_20120116_010716.log'
16/01/2012 01:07:24 : INFO  : Initialised job:
Sequence
>batch____
MKTALLLEKLEGQLATLRQRCAPVSQFATLSARFDRHLFQTRATTLQACLDEAGDNLAAL
RHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAPPKIARWQRKRIQHQDFER
RLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCRHALEKIENRLARLTR

16/01/2012 01:07:25 : INFO  : Checked sequence
16/01/2012 01:07:30 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 01:07:31 : INFO  : PSI-BLAST 3 iterations
16/01/2012 01:08:58 : INFO  : PSI-BLAST 5 iterations
16/01/2012 01:11:10 : INFO  : Finished PSI-BLAST
16/01/2012 01:11:12 : INFO  : Running Buildali to generate a3m file
16/01/2012 01:17:22 : INFO  : Converting to HMM
16/01/2012 01:17:24 : INFO  : Calibrating HMM
16/01/2012 01:17:34 : INFO  : Searching HMM database
16/01/2012 01:21:38 : INFO  : Finished buildali
16/01/2012 01:21:40 : INFO  : Predicting secondary structure
16/01/2012 01:21:47 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 01:21:48 : INFO  : Predicting Disordered regions
16/01/2012 01:21:52 : INFO  : Predicted Disorder (Disopred)
16/01/2012 01:21:53 : INFO  : Running memsat_svm check
16/01/2012 01:23:57 : INFO  : Running memsat_svm full
16/01/2012 01:25:50 : INFO  : Predicted Transmembrane (memsat_svm) ID '79c1ab28f9820b41'
16/01/2012 01:25:52 : INFO  : Initialising fold library search
16/01/2012 01:25:55 : INFO  : Initialised search input
16/01/2012 01:25:57 : INFO  : Building Ensemble models
16/01/2012 01:26:00 : INFO  : Building hh.c2oszA_.model.1.pdb
16/01/2012 01:26:13 : INFO  : Building c2oszA_.1.pdb
16/01/2012 01:26:26 : INFO  : Building c1ei3C_.2.pdb
16/01/2012 01:26:37 : INFO  : Building c1deqF_.3.pdb
16/01/2012 01:26:48 : INFO  : Building c3ojaB_.4.pdb
16/01/2012 01:27:01 : INFO  : Building c3u59C_.5.pdb
16/01/2012 01:27:16 : INFO  : Building c1deqO_.6.pdb
16/01/2012 01:27:26 : INFO  : Building c2wukD_.7.pdb
16/01/2012 01:27:39 : INFO  : Building c2xusA_.8.pdb
16/01/2012 01:27:52 : INFO  : Building d1k1fa_.9.pdb
16/01/2012 01:28:05 : INFO  : Building c3cwgA_.10.pdb
16/01/2012 01:28:19 : INFO  : Building c2efrB_.11.pdb
16/01/2012 01:28:32 : INFO  : Building c3pltB_.12.pdb
16/01/2012 01:28:44 : INFO  : Building c2gl2B_.13.pdb
16/01/2012 01:28:57 : INFO  : Building d2gtsa1.14.pdb
16/01/2012 01:29:09 : INFO  : Building d1ykhb1.15.pdb
16/01/2012 01:29:22 : INFO  : Building c2x6pB_.16.pdb
16/01/2012 01:29:36 : INFO  : Building c2x6pA_.17.pdb
16/01/2012 01:29:48 : INFO  : Building d1sdia_.18.pdb
16/01/2012 01:30:01 : INFO  : Building c2x6pC_.19.pdb
16/01/2012 01:30:13 : INFO  : Building d1gs9a_.20.pdb
16/01/2012 01:30:40 : INFO  : Finished HH model building
16/01/2012 01:30:42 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 01:32:29 : INFO  : html domain output complete ID '79c1ab28f9820b41'
16/01/2012 01:44:32 : INFO  : Run end  : Mon Jan 16 01:44:31 GMT 2012
